YE0469 6e0e1d6925ced58527ae1fcb71c6dfc9 255 SUPERFAMILY SSF56281 1 254 2.34E-40 T 22-04-2016 IPR001279 Metallo-beta-lactamase YE0469 6e0e1d6925ced58527ae1fcb71c6dfc9 255 PANTHER PTHR12553 1 254 5.1E-47 T 22-04-2016 YE0469 6e0e1d6925ced58527ae1fcb71c6dfc9 255 Pfam PF12706 Beta-lactamase superfamily domain 50 226 2.8E-17 T 22-04-2016 IPR001279 Metallo-beta-lactamase YE0469 6e0e1d6925ced58527ae1fcb71c6dfc9 255 Gene3D G3DSA:3.60.15.10 1 254 2.3E-55 T 22-04-2016 IPR001279 Metallo-beta-lactamase YE0469 6e0e1d6925ced58527ae1fcb71c6dfc9 255 TIGRFAM TIGR03307 PhnP: phosphonate metabolism protein PhnP 1 251 1.2E-119 T 22-04-2016 IPR017693 Phosphonate metabolism protein PhnP GO:0008081|GO:0019700 KEGG: 00440+3.1.4.55 YE1009 75afa43cf9a1222d8b0187415e68f393 545 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 21 532 8.9E-222 T 22-04-2016 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 YE1009 75afa43cf9a1222d8b0187415e68f393 545 SUPERFAMILY SSF56425 250 365 8.22E-41 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain YE1009 75afa43cf9a1222d8b0187415e68f393 545 Gene3D G3DSA:3.90.700.10 256 360 5.1E-36 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain YE1009 75afa43cf9a1222d8b0187415e68f393 545 Gene3D G3DSA:1.20.58.100 431 534 4.0E-35 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 YE1009 75afa43cf9a1222d8b0187415e68f393 545 PANTHER PTHR11632 5 545 9.4E-274 T 22-04-2016 YE1009 75afa43cf9a1222d8b0187415e68f393 545 PANTHER PTHR11632:SF27 5 545 9.4E-274 T 22-04-2016 YE1009 75afa43cf9a1222d8b0187415e68f393 545 SUPERFAMILY SSF46977 437 537 1.7E-31 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 YE1009 75afa43cf9a1222d8b0187415e68f393 545 SUPERFAMILY SSF51905 14 267 6.22E-73 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE1009 75afa43cf9a1222d8b0187415e68f393 545 SUPERFAMILY SSF51905 368 459 6.22E-73 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE1009 75afa43cf9a1222d8b0187415e68f393 545 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 367 389 1.29E-9 T 22-04-2016 YE1009 75afa43cf9a1222d8b0187415e68f393 545 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 23 42 1.29E-9 T 22-04-2016 YE1009 75afa43cf9a1222d8b0187415e68f393 545 Pfam PF00890 FAD binding domain 22 404 7.1E-100 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain YE1009 75afa43cf9a1222d8b0187415e68f393 545 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 534 1.8E-14 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 YE1009 75afa43cf9a1222d8b0187415e68f393 545 Gene3D G3DSA:3.50.50.60 361 421 1.0E-100 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE1009 75afa43cf9a1222d8b0187415e68f393 545 Gene3D G3DSA:3.50.50.60 11 255 1.0E-100 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE0181 81811bb05e2fbd82fb41af5a5d59a115 463 PIRSF PIRSF006060 1 463 6.6E-63 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YE0181 81811bb05e2fbd82fb41af5a5d59a115 463 PANTHER PTHR11785 1 454 0.0 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YE0181 81811bb05e2fbd82fb41af5a5d59a115 463 PANTHER PTHR11785:SF28 1 454 0.0 T 22-04-2016 YE0181 81811bb05e2fbd82fb41af5a5d59a115 463 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 YE0181 81811bb05e2fbd82fb41af5a5d59a115 463 Pfam PF00324 Amino acid permease 18 430 1.6E-101 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 YE4000 30aae5a7451bde0f23210ff159a58696 794 Pfam PF09371 Tex-like protein N-terminal domain 9 193 1.0E-68 T 22-04-2016 IPR018974 Tex-like protein, N-terminal YE4000 30aae5a7451bde0f23210ff159a58696 794 SUPERFAMILY SSF53098 322 468 6.07E-49 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE4000 30aae5a7451bde0f23210ff159a58696 794 SMART SM00316 648 719 6.4E-26 T 22-04-2016 IPR022967 RNA-binding domain, S1 YE4000 30aae5a7451bde0f23210ff159a58696 794 Pfam PF16921 Tex protein YqgF-like domain 327 450 7.5E-49 T 22-04-2016 IPR032639 Tex protein, YqgF-like domain YE4000 30aae5a7451bde0f23210ff159a58696 794 Pfam PF00575 S1 RNA binding domain 649 719 1.3E-22 T 22-04-2016 IPR003029 S1 domain GO:0003676 YE4000 30aae5a7451bde0f23210ff159a58696 794 Gene3D G3DSA:1.10.10.650 1 109 4.0E-45 T 22-04-2016 IPR023319 Tex-like protein, HTH domain YE4000 30aae5a7451bde0f23210ff159a58696 794 Gene3D G3DSA:3.30.420.140 327 449 1.3E-48 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 YE4000 30aae5a7451bde0f23210ff159a58696 794 SUPERFAMILY SSF50249 637 721 4.77E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE4000 30aae5a7451bde0f23210ff159a58696 794 PANTHER PTHR10724 1 747 0.0 T 22-04-2016 YE4000 30aae5a7451bde0f23210ff159a58696 794 SUPERFAMILY SSF47781 469 557 1.22E-28 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 YE4000 30aae5a7451bde0f23210ff159a58696 794 Gene3D G3DSA:1.10.150.310 498 629 2.6E-48 T 22-04-2016 IPR023097 Tex RuvX-like domain YE4000 30aae5a7451bde0f23210ff159a58696 794 Gene3D G3DSA:2.40.50.140 632 719 2.0E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE4000 30aae5a7451bde0f23210ff159a58696 794 Pfam PF12836 Helix-hairpin-helix motif 490 554 2.2E-28 T 22-04-2016 YE4000 30aae5a7451bde0f23210ff159a58696 794 SUPERFAMILY SSF47781 559 631 1.09E-19 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 YE4000 30aae5a7451bde0f23210ff159a58696 794 Gene3D G3DSA:1.10.3500.10 450 497 8.4E-104 T 22-04-2016 IPR023323 Tex-like domain YE4000 30aae5a7451bde0f23210ff159a58696 794 Gene3D G3DSA:1.10.3500.10 110 322 8.4E-104 T 22-04-2016 IPR023323 Tex-like domain YE4000 30aae5a7451bde0f23210ff159a58696 794 SMART SM00732 326 423 4.4E-35 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 YE4000 30aae5a7451bde0f23210ff159a58696 794 SUPERFAMILY SSF158832 2 321 1.83E-118 T 22-04-2016 YE4000 30aae5a7451bde0f23210ff159a58696 794 PANTHER PTHR10724:SF1 1 747 0.0 T 22-04-2016 YE1687 717f6680bc0f3dde53fb2f5f46fc7d6b 74 TIGRFAM TIGR02419 C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger protein, TraR family 3 64 1.0E-18 T 22-04-2016 IPR012783 Zinc finger, C4 DksA/TraR-type YE1687 717f6680bc0f3dde53fb2f5f46fc7d6b 74 PANTHER PTHR38777 1 74 7.4E-17 T 22-04-2016 YE1687 717f6680bc0f3dde53fb2f5f46fc7d6b 74 SUPERFAMILY SSF57716 34 71 1.07E-8 T 22-04-2016 YE1687 717f6680bc0f3dde53fb2f5f46fc7d6b 74 PANTHER PTHR38777:SF1 1 74 7.4E-17 T 22-04-2016 YE1687 717f6680bc0f3dde53fb2f5f46fc7d6b 74 Gene3D G3DSA:2.10.110.10 19 70 3.4E-4 T 22-04-2016 IPR001781 Zinc finger, LIM-type GO:0008270 YE1687 717f6680bc0f3dde53fb2f5f46fc7d6b 74 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 34 64 2.1E-11 T 22-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 YE2245 a5b9dc50c2b3a025835b593c51540b78 136 SUPERFAMILY SSF55729 16 125 5.58E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE2245 a5b9dc50c2b3a025835b593c51540b78 136 Gene3D G3DSA:3.40.630.30 13 114 5.3E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE2245 a5b9dc50c2b3a025835b593c51540b78 136 PANTHER PTHR13947 30 132 4.5E-18 T 22-04-2016 YE2245 a5b9dc50c2b3a025835b593c51540b78 136 Pfam PF00583 Acetyltransferase (GNAT) family 33 108 1.3E-15 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YE2265 a29ab665579e3bd0c6a21c74b410e606 334 Gene3D G3DSA:3.40.50.720 3 161 2.0E-81 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2265 a29ab665579e3bd0c6a21c74b410e606 334 SUPERFAMILY SSF55347 152 315 1.73E-80 T 22-04-2016 YE2265 a29ab665579e3bd0c6a21c74b410e606 334 Gene3D G3DSA:3.30.360.10 162 317 9.7E-87 T 22-04-2016 YE2265 a29ab665579e3bd0c6a21c74b410e606 334 PIRSF PIRSF000149 4 334 1.3E-134 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 YE2265 a29ab665579e3bd0c6a21c74b410e606 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 231 248 1.1E-46 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 YE2265 a29ab665579e3bd0c6a21c74b410e606 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 112 125 1.1E-46 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 YE2265 a29ab665579e3bd0c6a21c74b410e606 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 271 286 1.1E-46 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 YE2265 a29ab665579e3bd0c6a21c74b410e606 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 147 165 1.1E-46 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 YE2265 a29ab665579e3bd0c6a21c74b410e606 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 174 190 1.1E-46 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 YE2265 a29ab665579e3bd0c6a21c74b410e606 334 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 7 327 9.5E-137 T 22-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 YE2265 a29ab665579e3bd0c6a21c74b410e606 334 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 6 153 5.2E-62 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 YE2265 a29ab665579e3bd0c6a21c74b410e606 334 SUPERFAMILY SSF51735 6 169 1.71E-69 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2265 a29ab665579e3bd0c6a21c74b410e606 334 PANTHER PTHR10836 3 334 1.0E-251 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 YE2265 a29ab665579e3bd0c6a21c74b410e606 334 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 158 315 6.9E-71 T 22-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 YE2265 a29ab665579e3bd0c6a21c74b410e606 334 SMART SM00846 6 153 1.7E-98 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 YE2265 a29ab665579e3bd0c6a21c74b410e606 334 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 151 158 - T 22-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 YE2669 883ef90ec5cbd4f94a30f4394ce859a9 296 PANTHER PTHR21708 1 290 4.1E-44 T 22-04-2016 YE2669 883ef90ec5cbd4f94a30f4394ce859a9 296 SUPERFAMILY SSF48179 170 289 1.7E-21 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 YE2669 883ef90ec5cbd4f94a30f4394ce859a9 296 PANTHER PTHR21708:SF27 1 290 4.1E-44 T 22-04-2016 YE2669 883ef90ec5cbd4f94a30f4394ce859a9 296 SUPERFAMILY SSF51735 6 174 1.45E-10 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2669 883ef90ec5cbd4f94a30f4394ce859a9 296 Pfam PF02558 Ketopantoate reductase PanE/ApbA 7 149 1.2E-24 T 22-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 YE2669 883ef90ec5cbd4f94a30f4394ce859a9 296 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 6 289 2.4E-42 T 22-04-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 YE2669 883ef90ec5cbd4f94a30f4394ce859a9 296 Gene3D G3DSA:3.40.50.720 5 178 9.1E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2669 883ef90ec5cbd4f94a30f4394ce859a9 296 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 170 289 4.6E-17 T 22-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 YE2669 883ef90ec5cbd4f94a30f4394ce859a9 296 Gene3D G3DSA:1.10.1040.10 179 289 2.6E-20 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 YE2719 b8903b0bec72d82e84a7a5296a362674 351 PANTHER PTHR37477:SF1 2 348 3.6E-64 T 22-04-2016 YE2719 b8903b0bec72d82e84a7a5296a362674 351 SUPERFAMILY SSF159664 225 349 1.05E-31 T 22-04-2016 IPR002750 CobE/GbiG C-terminal domain GO:0009236 YE2719 b8903b0bec72d82e84a7a5296a362674 351 Pfam PF01890 Cobalamin synthesis G C-terminus 231 346 2.0E-23 T 22-04-2016 IPR002750 CobE/GbiG C-terminal domain GO:0009236 YE2719 b8903b0bec72d82e84a7a5296a362674 351 Gene3D G3DSA:3.30.420.180 225 348 1.1E-27 T 22-04-2016 IPR002750 CobE/GbiG C-terminal domain GO:0009236 YE2719 b8903b0bec72d82e84a7a5296a362674 351 PANTHER PTHR37477 2 348 3.6E-64 T 22-04-2016 YE2719 b8903b0bec72d82e84a7a5296a362674 351 Pfam PF11760 Cobalamin synthesis G N-terminal 54 134 6.7E-35 T 22-04-2016 IPR021744 Cobalamin synthesis G, N-terminal KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377|UniPathway: UPA00148 YE2719 b8903b0bec72d82e84a7a5296a362674 351 SUPERFAMILY SSF159672 6 238 1.24E-58 T 22-04-2016 YE2719 b8903b0bec72d82e84a7a5296a362674 351 Pfam PF11761 Cobalamin biosynthesis central region 140 215 1.1E-7 T 22-04-2016 IPR021745 Cobalamin biosynthesis central region KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377|UniPathway: UPA00148 YE3473 68e3de28922b5de24f0d493f2bc8fe67 583 PANTHER PTHR10803:SF0 10 397 4.8E-78 T 22-04-2016 YE3473 68e3de28922b5de24f0d493f2bc8fe67 583 SUPERFAMILY SSF52540 7 284 9.34E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3473 68e3de28922b5de24f0d493f2bc8fe67 583 Gene3D G3DSA:3.40.50.300 10 267 1.5E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3473 68e3de28922b5de24f0d493f2bc8fe67 583 Gene3D G3DSA:3.40.50.300 320 577 1.3E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3473 68e3de28922b5de24f0d493f2bc8fe67 583 TIGRFAM TIGR04291 arsen_driv_ArsA: arsenical pump-driving ATPase 7 570 7.2E-287 T 22-04-2016 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 YE3473 68e3de28922b5de24f0d493f2bc8fe67 583 PIRSF PIRSF001327 1 583 2.1E-270 T 22-04-2016 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 YE3473 68e3de28922b5de24f0d493f2bc8fe67 583 TIGRFAM TIGR00345 GET3_arsA_TRC40: transport-energizing ATPase, TRC40/GET3/ArsA family 12 296 6.6E-100 T 22-04-2016 IPR016300 Arsenical pump ATPase, ArsA/GET3 GO:0005524|GO:0016887 YE3473 68e3de28922b5de24f0d493f2bc8fe67 583 SMART SM00382 7 226 4.0 T 22-04-2016 IPR003593 AAA+ ATPase domain YE3473 68e3de28922b5de24f0d493f2bc8fe67 583 SMART SM00382 326 518 0.21 T 22-04-2016 IPR003593 AAA+ ATPase domain YE3473 68e3de28922b5de24f0d493f2bc8fe67 583 SUPERFAMILY SSF52540 312 576 2.19E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3473 68e3de28922b5de24f0d493f2bc8fe67 583 PANTHER PTHR10803 10 397 4.8E-78 T 22-04-2016 IPR016300 Arsenical pump ATPase, ArsA/GET3 GO:0005524|GO:0016887 YE3473 68e3de28922b5de24f0d493f2bc8fe67 583 Pfam PF02374 Anion-transporting ATPase 478 582 1.7E-7 T 22-04-2016 IPR025723 Anion-transporting ATPase-like domain YE3473 68e3de28922b5de24f0d493f2bc8fe67 583 Pfam PF02374 Anion-transporting ATPase 10 292 5.6E-88 T 22-04-2016 IPR025723 Anion-transporting ATPase-like domain YE3473 68e3de28922b5de24f0d493f2bc8fe67 583 Pfam PF02374 Anion-transporting ATPase 329 475 1.0E-32 T 22-04-2016 IPR025723 Anion-transporting ATPase-like domain YE0366 b24a85727f6f3860f0b11bed52ad3e7e 1076 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 920 954 - T 22-04-2016 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 YE0366 b24a85727f6f3860f0b11bed52ad3e7e 1076 SUPERFAMILY SSF50182 891 956 9.48E-17 T 22-04-2016 IPR010920 LSM domain YE0366 b24a85727f6f3860f0b11bed52ad3e7e 1076 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 451 787 1.1E-117 T 22-04-2016 IPR025692 Mechanosensitive ion channel inner membrane domain 1 YE0366 b24a85727f6f3860f0b11bed52ad3e7e 1076 PANTHER PTHR30347 4 1076 0.0 T 22-04-2016 YE0366 b24a85727f6f3860f0b11bed52ad3e7e 1076 SUPERFAMILY SSF82689 958 1053 8.24E-15 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 YE0366 b24a85727f6f3860f0b11bed52ad3e7e 1076 Gene3D G3DSA:2.30.30.60 906 955 1.3E-16 T 22-04-2016 YE0366 b24a85727f6f3860f0b11bed52ad3e7e 1076 Gene3D G3DSA:3.30.70.100 961 1045 6.3E-7 T 22-04-2016 YE0366 b24a85727f6f3860f0b11bed52ad3e7e 1076 Pfam PF12795 Mechanosensitive ion channel porin domain 1 229 2.0E-63 T 22-04-2016 IPR024393 Mechanosensitive ion channel MscS, porin domain YE0366 b24a85727f6f3860f0b11bed52ad3e7e 1076 SUPERFAMILY SSF82861 806 889 1.96E-8 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 YE0366 b24a85727f6f3860f0b11bed52ad3e7e 1076 Pfam PF00924 Mechanosensitive ion channel 848 1046 2.3E-52 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 YE0366 b24a85727f6f3860f0b11bed52ad3e7e 1076 PANTHER PTHR30347:SF0 4 1076 0.0 T 22-04-2016 YE3512 29c5333333d6efa5f8fa74c6c7500393 189 Pfam PF11198 Protein of unknown function (DUF2857) 9 181 5.8E-63 T 22-04-2016 IPR021364 Protein of unknown function DUF2857 YE0077 804b9a4f76ffa33680c7f349ccb9fcca 515 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 85 300 2.9E-82 T 22-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 YE0077 804b9a4f76ffa33680c7f349ccb9fcca 515 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 6 512 2.6E-239 T 22-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 YE0077 804b9a4f76ffa33680c7f349ccb9fcca 515 PIRSF PIRSF001492 1 515 6.3E-205 T 22-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 YE0077 804b9a4f76ffa33680c7f349ccb9fcca 515 Pfam PF01676 Metalloenzyme superfamily 6 501 1.6E-82 T 22-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 YE0077 804b9a4f76ffa33680c7f349ccb9fcca 515 PANTHER PTHR31637 1 515 3.8E-296 T 22-04-2016 YE0077 804b9a4f76ffa33680c7f349ccb9fcca 515 SUPERFAMILY SSF64158 79 311 7.72E-86 T 22-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 YE0077 804b9a4f76ffa33680c7f349ccb9fcca 515 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 6 513 50.031 T 22-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 YE0077 804b9a4f76ffa33680c7f349ccb9fcca 515 Gene3D G3DSA:3.40.720.10 316 511 2.9E-87 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 YE0077 804b9a4f76ffa33680c7f349ccb9fcca 515 Gene3D G3DSA:3.40.720.10 5 79 2.9E-87 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 YE0077 804b9a4f76ffa33680c7f349ccb9fcca 515 Gene3D G3DSA:3.40.1450.10 80 311 5.2E-97 T 22-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 YE0077 804b9a4f76ffa33680c7f349ccb9fcca 515 SUPERFAMILY SSF53649 5 79 1.31E-73 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 YE0077 804b9a4f76ffa33680c7f349ccb9fcca 515 SUPERFAMILY SSF53649 312 511 1.31E-73 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 YE0077 804b9a4f76ffa33680c7f349ccb9fcca 515 PANTHER PTHR31637:SF0 1 515 3.8E-296 T 22-04-2016 YE4124 01e2009a89aec3e7d81e8ce00c49f473 364 PANTHER PTHR11080:SF16 1 255 8.7E-42 T 22-04-2016 YE4124 01e2009a89aec3e7d81e8ce00c49f473 364 SUPERFAMILY SSF52499 21 203 5.49E-35 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 YE4124 01e2009a89aec3e7d81e8ce00c49f473 364 Pfam PF00857 Isochorismatase family 26 163 2.4E-21 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 YE4124 01e2009a89aec3e7d81e8ce00c49f473 364 Gene3D G3DSA:3.40.50.850 7 207 4.1E-35 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 YE4124 01e2009a89aec3e7d81e8ce00c49f473 364 PANTHER PTHR11080 1 255 8.7E-42 T 22-04-2016 YE3898 4b9d9ab2444a10a15a888f84a80fffbc 330 PANTHER PTHR32108 1 330 1.4E-161 T 22-04-2016 YE3898 4b9d9ab2444a10a15a888f84a80fffbc 330 SMART SM00662 23 234 1.4E-105 T 22-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YE3898 4b9d9ab2444a10a15a888f84a80fffbc 330 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 317 34.627 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YE3898 4b9d9ab2444a10a15a888f84a80fffbc 330 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 316 5.9E-113 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YE3898 4b9d9ab2444a10a15a888f84a80fffbc 330 Gene3D G3DSA:2.170.120.12 58 177 5.6E-40 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YE3898 4b9d9ab2444a10a15a888f84a80fffbc 330 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 156 1.6E-23 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YE3898 4b9d9ab2444a10a15a888f84a80fffbc 330 Gene3D G3DSA:3.30.1360.10 9 57 1.5E-10 T 22-04-2016 YE3898 4b9d9ab2444a10a15a888f84a80fffbc 330 SUPERFAMILY SSF55257 179 231 1.57E-30 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YE3898 4b9d9ab2444a10a15a888f84a80fffbc 330 SUPERFAMILY SSF55257 6 53 1.57E-30 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YE3898 4b9d9ab2444a10a15a888f84a80fffbc 330 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 256 328 7.0E-36 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YE3898 4b9d9ab2444a10a15a888f84a80fffbc 330 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 228 3.9E-24 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YE3898 4b9d9ab2444a10a15a888f84a80fffbc 330 Gene3D G3DSA:1.10.150.20 244 328 6.9E-38 T 22-04-2016 YE3898 4b9d9ab2444a10a15a888f84a80fffbc 330 SUPERFAMILY SSF47789 251 325 1.26E-25 T 22-04-2016 YE3898 4b9d9ab2444a10a15a888f84a80fffbc 330 PANTHER PTHR32108:SF0 1 330 1.4E-161 T 22-04-2016 YE3898 4b9d9ab2444a10a15a888f84a80fffbc 330 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 245 308 6.0E-24 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YE3898 4b9d9ab2444a10a15a888f84a80fffbc 330 SUPERFAMILY SSF56553 53 178 2.09E-41 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YE2782 8a7f8ef47423c46c1cb5f9588f590420 193 Pfam PF00692 dUTPase 79 185 1.7E-10 T 22-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 YE2782 8a7f8ef47423c46c1cb5f9588f590420 193 Gene3D G3DSA:2.70.40.10 1 192 1.4E-60 T 22-04-2016 IPR029054 dUTPase-like YE2782 8a7f8ef47423c46c1cb5f9588f590420 193 PANTHER PTHR11241 77 192 5.0E-69 T 22-04-2016 YE2782 8a7f8ef47423c46c1cb5f9588f590420 193 PANTHER PTHR11241 1 58 5.0E-69 T 22-04-2016 YE2782 8a7f8ef47423c46c1cb5f9588f590420 193 PANTHER PTHR11241:SF1 77 192 5.0E-69 T 22-04-2016 YE2782 8a7f8ef47423c46c1cb5f9588f590420 193 PANTHER PTHR11241:SF1 1 58 5.0E-69 T 22-04-2016 YE2782 8a7f8ef47423c46c1cb5f9588f590420 193 Hamap MF_00146 Deoxycytidine triphosphate deaminase [dcd]. 1 190 34.684 T 22-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 YE2782 8a7f8ef47423c46c1cb5f9588f590420 193 SUPERFAMILY SSF51283 1 193 2.02E-60 T 22-04-2016 IPR029054 dUTPase-like YE2782 8a7f8ef47423c46c1cb5f9588f590420 193 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 2 190 2.1E-69 T 22-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 YE2861 7ba302930025e63cb0d3c66000a71d38 267 SUPERFAMILY SSF53850 70 228 3.3E-14 T 22-04-2016 YE2861 7ba302930025e63cb0d3c66000a71d38 267 PANTHER PTHR35841:SF2 19 267 3.3E-40 T 22-04-2016 YE2861 7ba302930025e63cb0d3c66000a71d38 267 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 89 244 2.2E-20 T 22-04-2016 YE2861 7ba302930025e63cb0d3c66000a71d38 267 PANTHER PTHR35841 19 267 3.3E-40 T 22-04-2016 YE0009 4d79751ecc04d703abaa7dd7769ab37c 500 SMART SM00382 29 225 8.7E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain YE0009 4d79751ecc04d703abaa7dd7769ab37c 500 SMART SM00382 277 473 2.4E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain YE0009 4d79751ecc04d703abaa7dd7769ab37c 500 PANTHER PTHR24220:SF416 6 378 6.9E-205 T 22-04-2016 YE0009 4d79751ecc04d703abaa7dd7769ab37c 500 ProSitePatterns PS00211 ABC transporters family signature. 396 410 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE0009 4d79751ecc04d703abaa7dd7769ab37c 500 SUPERFAMILY SSF52540 3 231 2.43E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0009 4d79751ecc04d703abaa7dd7769ab37c 500 SUPERFAMILY SSF52540 267 482 9.37E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0009 4d79751ecc04d703abaa7dd7769ab37c 500 Gene3D G3DSA:3.40.50.300 2 236 9.6E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0009 4d79751ecc04d703abaa7dd7769ab37c 500 Pfam PF00005 ABC transporter 269 423 9.3E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE0009 4d79751ecc04d703abaa7dd7769ab37c 500 Pfam PF00005 ABC transporter 22 169 9.6E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE0009 4d79751ecc04d703abaa7dd7769ab37c 500 PANTHER PTHR24220 6 378 6.9E-205 T 22-04-2016 YE0009 4d79751ecc04d703abaa7dd7769ab37c 500 Gene3D G3DSA:3.40.50.300 268 485 1.3E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0733 07f5f12dd32e991409233d848ea9ed80 463 PANTHER PTHR23515:SF1 16 377 2.1E-195 T 22-04-2016 YE0733 07f5f12dd32e991409233d848ea9ed80 463 PANTHER PTHR23515:SF1 400 459 2.1E-195 T 22-04-2016 YE0733 07f5f12dd32e991409233d848ea9ed80 463 PANTHER PTHR23515 16 377 2.1E-195 T 22-04-2016 YE0733 07f5f12dd32e991409233d848ea9ed80 463 PANTHER PTHR23515 400 459 2.1E-195 T 22-04-2016 YE0733 07f5f12dd32e991409233d848ea9ed80 463 Gene3D G3DSA:1.20.1250.20 253 456 2.8E-9 T 22-04-2016 YE0733 07f5f12dd32e991409233d848ea9ed80 463 TIGRFAM TIGR00886 2A0108: nitrite transporter 37 418 2.9E-95 T 22-04-2016 IPR004737 Nitrate transporter GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021 YE0733 07f5f12dd32e991409233d848ea9ed80 463 SUPERFAMILY SSF103473 29 460 3.14E-35 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE0733 07f5f12dd32e991409233d848ea9ed80 463 Gene3D G3DSA:1.20.1250.20 36 233 9.7E-12 T 22-04-2016 YE0733 07f5f12dd32e991409233d848ea9ed80 463 Pfam PF07690 Major Facilitator Superfamily 44 422 4.9E-12 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YE2406 04d8c63631da8441c1e481dbdb88ec8a 576 SUPERFAMILY SSF55190 2 100 1.44E-22 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 YE2406 04d8c63631da8441c1e481dbdb88ec8a 576 Gene3D G3DSA:3.30.1360.70 2 105 9.6E-35 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 YE2406 04d8c63631da8441c1e481dbdb88ec8a 576 PANTHER PTHR11956:SF1 1 576 9.8E-270 T 22-04-2016 YE2406 04d8c63631da8441c1e481dbdb88ec8a 576 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 576 28.623 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 YE2406 04d8c63631da8441c1e481dbdb88ec8a 576 PANTHER PTHR11956 1 576 9.8E-270 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 YE2406 04d8c63631da8441c1e481dbdb88ec8a 576 Pfam PF00750 tRNA synthetases class I (R) 98 446 1.1E-168 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 YE2406 04d8c63631da8441c1e481dbdb88ec8a 576 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YE2406 04d8c63631da8441c1e481dbdb88ec8a 576 Pfam PF05746 DALR anticodon binding domain 460 576 5.5E-34 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 YE2406 04d8c63631da8441c1e481dbdb88ec8a 576 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 87 8.7E-22 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 YE2406 04d8c63631da8441c1e481dbdb88ec8a 576 SUPERFAMILY SSF52374 109 454 1.39E-95 T 22-04-2016 YE2406 04d8c63631da8441c1e481dbdb88ec8a 576 SUPERFAMILY SSF47323 454 576 9.81E-35 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YE2406 04d8c63631da8441c1e481dbdb88ec8a 576 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 576 2.0E-205 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 YE2406 04d8c63631da8441c1e481dbdb88ec8a 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 1.5E-25 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 YE2406 04d8c63631da8441c1e481dbdb88ec8a 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 303 324 1.5E-25 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 YE2406 04d8c63631da8441c1e481dbdb88ec8a 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 1.5E-25 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 YE2406 04d8c63631da8441c1e481dbdb88ec8a 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 1.5E-25 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 YE2406 04d8c63631da8441c1e481dbdb88ec8a 576 Gene3D G3DSA:1.10.730.10 454 576 8.8E-36 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YE2406 04d8c63631da8441c1e481dbdb88ec8a 576 Gene3D G3DSA:3.40.50.620 109 451 1.3E-116 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YE2406 04d8c63631da8441c1e481dbdb88ec8a 576 SMART SM01016 5 87 1.8E-29 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 YE2406 04d8c63631da8441c1e481dbdb88ec8a 576 SMART SM00836 460 576 1.0E-35 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 YE1130 d25b2543c634f0897c820b2f8dc4cb1d 239 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 12 237 6.1E-85 T 22-04-2016 IPR017788 DnaA regulatory inactivator Hda GO:0032297 YE1130 d25b2543c634f0897c820b2f8dc4cb1d 239 Gene3D G3DSA:3.40.50.300 8 170 1.0E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1130 d25b2543c634f0897c820b2f8dc4cb1d 239 PANTHER PTHR30050:SF5 10 238 3.1E-123 T 22-04-2016 YE1130 d25b2543c634f0897c820b2f8dc4cb1d 239 PANTHER PTHR30050 10 238 3.1E-123 T 22-04-2016 YE1130 d25b2543c634f0897c820b2f8dc4cb1d 239 Pfam PF00308 Bacterial dnaA protein 22 218 2.1E-17 T 22-04-2016 IPR013317 Chromosomal replication initiator protein DnaA YE1130 d25b2543c634f0897c820b2f8dc4cb1d 239 Gene3D G3DSA:1.10.8.60 173 238 1.3E-30 T 22-04-2016 YE1130 d25b2543c634f0897c820b2f8dc4cb1d 239 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 49 69 1.3E-6 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like YE1130 d25b2543c634f0897c820b2f8dc4cb1d 239 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 137 164 1.3E-6 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like YE1130 d25b2543c634f0897c820b2f8dc4cb1d 239 SUPERFAMILY SSF52540 24 217 2.58E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1130 d25b2543c634f0897c820b2f8dc4cb1d 239 Hamap MF_01158 DnaA regulatory inactivator Hda [hda]. 11 239 58.653 T 22-04-2016 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae YE1746 5a42567549c5994a02dfee11973f1a7d 440 SUPERFAMILY SSF55073 277 436 5.26E-43 T 22-04-2016 IPR029787 Nucleotide cyclase YE1746 5a42567549c5994a02dfee11973f1a7d 440 SMART SM00091 139 214 1.3 T 22-04-2016 IPR000014 PAS domain YE1746 5a42567549c5994a02dfee11973f1a7d 440 SMART SM00091 13 80 9.3E-5 T 22-04-2016 IPR000014 PAS domain YE1746 5a42567549c5994a02dfee11973f1a7d 440 Gene3D G3DSA:3.30.450.20 118 272 9.0E-22 T 22-04-2016 YE1746 5a42567549c5994a02dfee11973f1a7d 440 Gene3D G3DSA:3.30.70.270 274 436 1.2E-47 T 22-04-2016 YE1746 5a42567549c5994a02dfee11973f1a7d 440 SMART SM00086 85 127 1.7E-6 T 22-04-2016 IPR001610 PAC motif YE1746 5a42567549c5994a02dfee11973f1a7d 440 SMART SM00086 220 261 150.0 T 22-04-2016 IPR001610 PAC motif YE1746 5a42567549c5994a02dfee11973f1a7d 440 Pfam PF13426 PAS domain 26 126 2.2E-15 T 22-04-2016 IPR000014 PAS domain YE1746 5a42567549c5994a02dfee11973f1a7d 440 SMART SM00267 261 437 3.0E-60 T 22-04-2016 IPR000160 GGDEF domain YE1746 5a42567549c5994a02dfee11973f1a7d 440 Pfam PF00990 Diguanylate cyclase, GGDEF domain 272 433 3.9E-46 T 22-04-2016 IPR000160 GGDEF domain YE1746 5a42567549c5994a02dfee11973f1a7d 440 Pfam PF08447 PAS fold 167 251 6.6E-8 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 YE1746 5a42567549c5994a02dfee11973f1a7d 440 SUPERFAMILY SSF55785 150 263 6.43E-13 T 22-04-2016 IPR000014 PAS domain YE1746 5a42567549c5994a02dfee11973f1a7d 440 PANTHER PTHR10799 248 434 1.4E-29 T 22-04-2016 YE1746 5a42567549c5994a02dfee11973f1a7d 440 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 268 436 5.4E-51 T 22-04-2016 IPR000160 GGDEF domain YE1746 5a42567549c5994a02dfee11973f1a7d 440 SUPERFAMILY SSF55785 25 127 7.57E-20 T 22-04-2016 IPR000014 PAS domain YE1746 5a42567549c5994a02dfee11973f1a7d 440 Gene3D G3DSA:3.30.450.20 18 117 6.6E-19 T 22-04-2016 YE1746 5a42567549c5994a02dfee11973f1a7d 440 PANTHER PTHR10799:SF686 248 434 1.4E-29 T 22-04-2016 YE1746 5a42567549c5994a02dfee11973f1a7d 440 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 24 129 2.0E-19 T 22-04-2016 IPR000014 PAS domain YE2911 b41f26da8ec071b6e0a68fd3718a0205 354 Gene3D G3DSA:3.40.50.300 17 220 4.3E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2911 b41f26da8ec071b6e0a68fd3718a0205 354 Pfam PF00005 ABC transporter 16 156 5.9E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE2911 b41f26da8ec071b6e0a68fd3718a0205 354 PANTHER PTHR24220:SF284 253 287 1.2E-114 T 22-04-2016 YE2911 b41f26da8ec071b6e0a68fd3718a0205 354 PANTHER PTHR24220:SF284 1 221 1.2E-114 T 22-04-2016 YE2911 b41f26da8ec071b6e0a68fd3718a0205 354 SUPERFAMILY SSF52540 8 221 9.15E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2911 b41f26da8ec071b6e0a68fd3718a0205 354 Pfam PF03459 TOBE domain 290 349 1.1E-16 T 22-04-2016 IPR005116 Transport-associated OB, type 1 YE2911 b41f26da8ec071b6e0a68fd3718a0205 354 SUPERFAMILY SSF50331 235 350 5.29E-23 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal YE2911 b41f26da8ec071b6e0a68fd3718a0205 354 Gene3D G3DSA:2.40.50.100 278 348 3.9E-22 T 22-04-2016 YE2911 b41f26da8ec071b6e0a68fd3718a0205 354 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 289 349 6.0E-16 T 22-04-2016 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 YE2911 b41f26da8ec071b6e0a68fd3718a0205 354 PANTHER PTHR24220 253 287 1.2E-114 T 22-04-2016 YE2911 b41f26da8ec071b6e0a68fd3718a0205 354 PANTHER PTHR24220 1 221 1.2E-114 T 22-04-2016 YE2911 b41f26da8ec071b6e0a68fd3718a0205 354 SMART SM00382 23 206 8.0E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YE2911 b41f26da8ec071b6e0a68fd3718a0205 354 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE2911 b41f26da8ec071b6e0a68fd3718a0205 354 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 2 350 8.3E-151 T 22-04-2016 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 YE1610 4b86a97f65a6870a5f739775bd05a6d3 414 SUPERFAMILY SSF103473 9 399 1.22E-72 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE1610 4b86a97f65a6870a5f739775bd05a6d3 414 Gene3D G3DSA:1.20.1250.20 217 411 5.8E-30 T 22-04-2016 YE1610 4b86a97f65a6870a5f739775bd05a6d3 414 PANTHER PTHR23504:SF14 1 393 8.6E-117 T 22-04-2016 YE1610 4b86a97f65a6870a5f739775bd05a6d3 414 Gene3D G3DSA:1.20.1250.20 11 194 1.9E-41 T 22-04-2016 YE1610 4b86a97f65a6870a5f739775bd05a6d3 414 PRINTS PR01035 Tetracycline resistance protein signature 142 164 9.6E-12 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 YE1610 4b86a97f65a6870a5f739775bd05a6d3 414 PRINTS PR01035 Tetracycline resistance protein signature 346 369 9.6E-12 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 YE1610 4b86a97f65a6870a5f739775bd05a6d3 414 PRINTS PR01035 Tetracycline resistance protein signature 85 109 9.6E-12 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 YE1610 4b86a97f65a6870a5f739775bd05a6d3 414 PRINTS PR01035 Tetracycline resistance protein signature 112 133 9.6E-12 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 YE1610 4b86a97f65a6870a5f739775bd05a6d3 414 PRINTS PR01035 Tetracycline resistance protein signature 311 331 9.6E-12 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 YE1610 4b86a97f65a6870a5f739775bd05a6d3 414 PRINTS PR01035 Tetracycline resistance protein signature 23 39 9.6E-12 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 YE1610 4b86a97f65a6870a5f739775bd05a6d3 414 Pfam PF07690 Major Facilitator Superfamily 18 248 8.9E-38 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YE1610 4b86a97f65a6870a5f739775bd05a6d3 414 Hamap MF_01528 Multidrug resistance protein MdtG [mdtG]. 1 404 46.282 T 22-04-2016 IPR023692 Multidrug resistance protein MdtG GO:0005215|GO:0005886 YE1610 4b86a97f65a6870a5f739775bd05a6d3 414 PANTHER PTHR23504 1 393 8.6E-117 T 22-04-2016 YE0198 175964e075ad81db8fd1e9c0c13359bb 410 PIRSF PIRSF033271 1 408 2.0E-195 T 22-04-2016 IPR008322 Uncharacterised protein family UPF0261 YE0198 175964e075ad81db8fd1e9c0c13359bb 410 PANTHER PTHR31862 1 410 2.6E-224 T 22-04-2016 YE0198 175964e075ad81db8fd1e9c0c13359bb 410 Hamap MF_00677 UPF0261 protein . 2 407 52.288 T 22-04-2016 IPR008322 Uncharacterised protein family UPF0261 YE0198 175964e075ad81db8fd1e9c0c13359bb 410 Pfam PF06792 Uncharacterised protein family (UPF0261) 4 404 1.0E-160 T 22-04-2016 IPR008322 Uncharacterised protein family UPF0261 YE0950 751a0bfc9499be577a9a7757823c6265 221 ProSitePatterns PS00211 ABC transporters family signature. 122 136 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE0950 751a0bfc9499be577a9a7757823c6265 221 SMART SM00382 26 199 1.5E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain YE0950 751a0bfc9499be577a9a7757823c6265 221 PANTHER PTHR24220:SF486 3 194 6.6E-85 T 22-04-2016 YE0950 751a0bfc9499be577a9a7757823c6265 221 Pfam PF00005 ABC transporter 18 150 3.8E-15 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE0950 751a0bfc9499be577a9a7757823c6265 221 Gene3D G3DSA:3.40.50.300 2 194 8.4E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0950 751a0bfc9499be577a9a7757823c6265 221 PANTHER PTHR24220 3 194 6.6E-85 T 22-04-2016 YE0950 751a0bfc9499be577a9a7757823c6265 221 SUPERFAMILY SSF52540 2 194 2.77E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3788 b9b1042ab9509205401a2912643a4532 128 SUPERFAMILY SSF47175 23 128 3.77E-33 T 22-04-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 YE3788 b9b1042ab9509205401a2912643a4532 128 Pfam PF07361 Cytochrome b562 25 128 8.7E-30 T 22-04-2016 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 YE3788 b9b1042ab9509205401a2912643a4532 128 PIRSF PIRSF000029 1 128 2.1E-54 T 22-04-2016 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 YE3788 b9b1042ab9509205401a2912643a4532 128 Gene3D G3DSA:1.20.120.10 23 128 5.3E-40 T 22-04-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 YE2085 4c451f4fd661e240630865555018af50 497 PANTHER PTHR34217:SF1 4 497 3.5E-263 T 22-04-2016 YE2085 4c451f4fd661e240630865555018af50 497 SUPERFAMILY SSF55486 6 497 1.83E-123 T 22-04-2016 YE2085 4c451f4fd661e240630865555018af50 497 PIRSF PIRSF006615 4 497 2.4E-199 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 YE2085 4c451f4fd661e240630865555018af50 497 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 246 265 2.9E-39 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 YE2085 4c451f4fd661e240630865555018af50 497 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 293 309 2.9E-39 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 YE2085 4c451f4fd661e240630865555018af50 497 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 448 466 2.9E-39 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 YE2085 4c451f4fd661e240630865555018af50 497 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 333 352 2.9E-39 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 YE2085 4c451f4fd661e240630865555018af50 497 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 403 424 2.9E-39 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 YE2085 4c451f4fd661e240630865555018af50 497 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 266 285 2.9E-39 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 YE2085 4c451f4fd661e240630865555018af50 497 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 150 170 2.9E-39 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 YE2085 4c451f4fd661e240630865555018af50 497 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 16 496 5.8E-97 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 YE2085 4c451f4fd661e240630865555018af50 497 PANTHER PTHR34217 4 497 3.5E-263 T 22-04-2016 YE1992 a0806dc653b13e2701aa287343513346 697 Pfam PF10531 SLBB domain 296 344 5.8E-11 T 22-04-2016 IPR019554 Soluble ligand binding domain YE1992 a0806dc653b13e2701aa287343513346 697 Pfam PF13237 4Fe-4S dicluster domain 373 427 2.8E-10 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YE1992 a0806dc653b13e2701aa287343513346 697 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 445 9.0E-179 T 22-04-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 YE1992 a0806dc653b13e2701aa287343513346 697 PANTHER PTHR11780:SF1 11 482 1.4E-254 T 22-04-2016 YE1992 a0806dc653b13e2701aa287343513346 697 SUPERFAMILY SSF142019 94 303 3.4E-58 T 22-04-2016 YE1992 a0806dc653b13e2701aa287343513346 697 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 377 388 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YE1992 a0806dc653b13e2701aa287343513346 697 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 416 427 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YE1992 a0806dc653b13e2701aa287343513346 697 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 139 283 6.6E-48 T 22-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain YE1992 a0806dc653b13e2701aa287343513346 697 SUPERFAMILY SSF46548 336 444 8.72E-22 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 YE1992 a0806dc653b13e2701aa287343513346 697 Gene3D G3DSA:1.10.1060.10 360 445 8.6E-20 T 22-04-2016 YE1992 a0806dc653b13e2701aa287343513346 697 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 115 2.3E-28 T 22-04-2016 IPR026902 RnfC Barrel sandwich hybrid domain YE1992 a0806dc653b13e2701aa287343513346 697 Hamap MF_00461 Electron transport complex subunit RsxC [rsxC]. 1 697 253.266 T 22-04-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 YE1992 a0806dc653b13e2701aa287343513346 697 PANTHER PTHR11780 11 482 1.4E-254 T 22-04-2016 YE0994 623f87a69d56f7679304f74c944ca958 160 ProSitePatterns PS01317 SsrA-binding protein. 32 44 - T 22-04-2016 IPR020081 SsrA-binding protein, conserved site YE0994 623f87a69d56f7679304f74c944ca958 160 PANTHER PTHR30308:SF2 1 160 1.1E-87 T 22-04-2016 YE0994 623f87a69d56f7679304f74c944ca958 160 TIGRFAM TIGR00086 smpB: SsrA-binding protein 14 156 4.3E-55 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 YE0994 623f87a69d56f7679304f74c944ca958 160 Pfam PF01668 SmpB protein 13 75 7.7E-30 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 YE0994 623f87a69d56f7679304f74c944ca958 160 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 14 122 3.0E-56 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 YE0994 623f87a69d56f7679304f74c944ca958 160 Gene3D G3DSA:2.40.280.10 13 133 3.3E-51 T 22-04-2016 IPR023620 Small protein B YE0994 623f87a69d56f7679304f74c944ca958 160 Hamap MF_00023 SsrA-binding protein [smpB]. 1 160 74.997 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 YE0994 623f87a69d56f7679304f74c944ca958 160 PANTHER PTHR30308 1 160 1.1E-87 T 22-04-2016 YE0994 623f87a69d56f7679304f74c944ca958 160 SUPERFAMILY SSF74982 8 138 1.57E-51 T 22-04-2016 IPR023620 Small protein B YE2985 f6c3b358ed040d535f4261956cd589b5 474 PANTHER PTHR11918:SF43 1 474 7.5E-240 T 22-04-2016 YE2985 f6c3b358ed040d535f4261956cd589b5 474 SMART SM00729 147 367 6.5E-64 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 YE2985 f6c3b358ed040d535f4261956cd589b5 474 Gene3D G3DSA:3.80.30.20 146 380 2.9E-81 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe YE2985 f6c3b358ed040d535f4261956cd589b5 474 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 74.294 T 22-04-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 YE2985 f6c3b358ed040d535f4261956cd589b5 474 Pfam PF01938 TRAM domain 378 440 4.7E-18 T 22-04-2016 IPR002792 TRAM domain YE2985 f6c3b358ed040d535f4261956cd589b5 474 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 YE2985 f6c3b358ed040d535f4261956cd589b5 474 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 1.2E-28 T 22-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 YE2985 f6c3b358ed040d535f4261956cd589b5 474 SUPERFAMILY SSF102114 126 373 4.84E-64 T 22-04-2016 YE2985 f6c3b358ed040d535f4261956cd589b5 474 PANTHER PTHR11918 1 474 7.5E-240 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein YE2985 f6c3b358ed040d535f4261956cd589b5 474 Pfam PF04055 Radical SAM superfamily 151 325 3.3E-27 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 YE2985 f6c3b358ed040d535f4261956cd589b5 474 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 438 1.7E-207 T 22-04-2016 YE2985 f6c3b358ed040d535f4261956cd589b5 474 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 6.7E-156 T 22-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 YE3542 f1bae6c8a7776d3bf5d903328f753191 224 PANTHER PTHR30587 5 220 2.7E-87 T 22-04-2016 YE3542 f1bae6c8a7776d3bf5d903328f753191 224 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 147 162 - T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YE3542 f1bae6c8a7776d3bf5d903328f753191 224 TIGRFAM TIGR01102 yscR: type III secretion apparatus protein, YscR/HrcR family 11 214 3.4E-79 T 22-04-2016 IPR005773 Yop virulence translocation protein R GO:0015031|GO:0016021 YE3542 f1bae6c8a7776d3bf5d903328f753191 224 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 195 207 - T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YE3542 f1bae6c8a7776d3bf5d903328f753191 224 Pfam PF00813 FliP family 15 214 8.6E-62 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YE3542 f1bae6c8a7776d3bf5d903328f753191 224 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 12 31 9.1E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YE3542 f1bae6c8a7776d3bf5d903328f753191 224 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 168 189 9.1E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YE3542 f1bae6c8a7776d3bf5d903328f753191 224 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 147 167 9.1E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YE3542 f1bae6c8a7776d3bf5d903328f753191 224 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 192 217 9.1E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YE3542 f1bae6c8a7776d3bf5d903328f753191 224 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 51 70 9.1E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YE3542 f1bae6c8a7776d3bf5d903328f753191 224 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 31 51 9.1E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YE0021 05e5b3304b3e7314ef9ef62e1ffc6be6 932 Gene3D G3DSA:3.30.420.10 331 545 6.6E-88 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE0021 05e5b3304b3e7314ef9ef62e1ffc6be6 932 Gene3D G3DSA:1.20.1060.10 546 665 7.1E-37 T 22-04-2016 YE0021 05e5b3304b3e7314ef9ef62e1ffc6be6 932 Gene3D G3DSA:1.10.150.20 187 253 1.2E-25 T 22-04-2016 YE0021 05e5b3304b3e7314ef9ef62e1ffc6be6 932 PANTHER PTHR10133 1 288 0.0 T 22-04-2016 YE0021 05e5b3304b3e7314ef9ef62e1ffc6be6 932 PANTHER PTHR10133 319 931 0.0 T 22-04-2016 YE0021 05e5b3304b3e7314ef9ef62e1ffc6be6 932 SUPERFAMILY SSF56672 525 932 5.67E-158 T 22-04-2016 YE0021 05e5b3304b3e7314ef9ef62e1ffc6be6 932 SUPERFAMILY SSF47807 171 291 6.88E-32 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 YE0021 05e5b3304b3e7314ef9ef62e1ffc6be6 932 SMART SM00474 333 520 5.5E-50 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 YE0021 05e5b3304b3e7314ef9ef62e1ffc6be6 932 SMART SM00482 689 896 1.6E-116 T 22-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE0021 05e5b3304b3e7314ef9ef62e1ffc6be6 932 ProSitePatterns PS00447 DNA polymerase family A signature. 757 776 - T 22-04-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE0021 05e5b3304b3e7314ef9ef62e1ffc6be6 932 SMART SM00279 173 208 1.2E-13 T 22-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 YE0021 05e5b3304b3e7314ef9ef62e1ffc6be6 932 Pfam PF01612 3'-5' exonuclease 333 520 3.9E-45 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 YE0021 05e5b3304b3e7314ef9ef62e1ffc6be6 932 PANTHER PTHR10133:SF27 1 288 0.0 T 22-04-2016 YE0021 05e5b3304b3e7314ef9ef62e1ffc6be6 932 PANTHER PTHR10133:SF27 319 931 0.0 T 22-04-2016 YE0021 05e5b3304b3e7314ef9ef62e1ffc6be6 932 SUPERFAMILY SSF53098 329 521 1.34E-58 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE0021 05e5b3304b3e7314ef9ef62e1ffc6be6 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 816 827 1.7E-79 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE0021 05e5b3304b3e7314ef9ef62e1ffc6be6 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 879 892 1.7E-79 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE0021 05e5b3304b3e7314ef9ef62e1ffc6be6 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 757 782 1.7E-79 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE0021 05e5b3304b3e7314ef9ef62e1ffc6be6 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 848 864 1.7E-79 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE0021 05e5b3304b3e7314ef9ef62e1ffc6be6 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 733 746 1.7E-79 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE0021 05e5b3304b3e7314ef9ef62e1ffc6be6 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 681 696 1.7E-79 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE0021 05e5b3304b3e7314ef9ef62e1ffc6be6 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 794 805 1.7E-79 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE0021 05e5b3304b3e7314ef9ef62e1ffc6be6 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 703 726 1.7E-79 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE0021 05e5b3304b3e7314ef9ef62e1ffc6be6 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 658 680 1.7E-79 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE0021 05e5b3304b3e7314ef9ef62e1ffc6be6 932 Gene3D G3DSA:3.30.70.370 822 932 2.1E-67 T 22-04-2016 YE0021 05e5b3304b3e7314ef9ef62e1ffc6be6 932 Gene3D G3DSA:3.30.70.370 666 714 2.1E-67 T 22-04-2016 YE0021 05e5b3304b3e7314ef9ef62e1ffc6be6 932 TIGRFAM TIGR00593 pola: DNA polymerase I 9 932 7.4E-289 T 22-04-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE0021 05e5b3304b3e7314ef9ef62e1ffc6be6 932 SUPERFAMILY SSF88723 7 170 4.91E-58 T 22-04-2016 IPR029060 PIN domain-like YE0021 05e5b3304b3e7314ef9ef62e1ffc6be6 932 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 272 8.1E-31 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 YE0021 05e5b3304b3e7314ef9ef62e1ffc6be6 932 SMART SM00475 7 268 1.3E-140 T 22-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 YE0021 05e5b3304b3e7314ef9ef62e1ffc6be6 932 Gene3D G3DSA:1.10.150.20 715 821 4.9E-36 T 22-04-2016 YE0021 05e5b3304b3e7314ef9ef62e1ffc6be6 932 Gene3D G3DSA:3.40.50.1010 8 186 5.1E-74 T 22-04-2016 IPR029060 PIN domain-like YE0021 05e5b3304b3e7314ef9ef62e1ffc6be6 932 Pfam PF00476 DNA polymerase family A 555 929 5.3E-155 T 22-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE0021 05e5b3304b3e7314ef9ef62e1ffc6be6 932 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 2.7E-56 T 22-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 YE4184 9c6f76c009c576766b1b7d61a961163e 190 Pfam PF03358 NADPH-dependent FMN reductase 7 149 2.8E-37 T 22-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 YE4184 9c6f76c009c576766b1b7d61a961163e 190 SUPERFAMILY SSF52218 7 180 5.74E-42 T 22-04-2016 IPR029039 Flavoprotein-like domain YE4184 9c6f76c009c576766b1b7d61a961163e 190 PANTHER PTHR30543 2 188 2.1E-69 T 22-04-2016 YE4184 9c6f76c009c576766b1b7d61a961163e 190 PANTHER PTHR30543:SF6 2 188 2.1E-69 T 22-04-2016 YE4184 9c6f76c009c576766b1b7d61a961163e 190 Gene3D G3DSA:3.40.50.360 3 188 5.8E-48 T 22-04-2016 IPR029039 Flavoprotein-like domain YE1496 4257d7d78b4185fe6f752bab8a532227 242 Gene3D G3DSA:3.40.50.300 3 234 2.4E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1496 4257d7d78b4185fe6f752bab8a532227 242 SUPERFAMILY SSF52540 3 234 1.1E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1496 4257d7d78b4185fe6f752bab8a532227 242 Pfam PF00005 ABC transporter 20 170 5.6E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE1496 4257d7d78b4185fe6f752bab8a532227 242 PANTHER PTHR24220 4 241 2.6E-173 T 22-04-2016 YE1496 4257d7d78b4185fe6f752bab8a532227 242 PANTHER PTHR24220:SF495 4 241 2.6E-173 T 22-04-2016 YE1496 4257d7d78b4185fe6f752bab8a532227 242 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE1496 4257d7d78b4185fe6f752bab8a532227 242 SMART SM00382 27 218 1.3E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain YE1496 4257d7d78b4185fe6f752bab8a532227 242 PIRSF PIRSF039085 1 242 1.8E-83 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 YE1343 955245832005fe78bf594c5d9806055a 310 Gene3D G3DSA:1.10.10.10 10 90 8.9E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1343 955245832005fe78bf594c5d9806055a 310 SUPERFAMILY SSF46785 9 89 4.99E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1343 955245832005fe78bf594c5d9806055a 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 71 2.1E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE1343 955245832005fe78bf594c5d9806055a 310 PANTHER PTHR30579 6 301 5.2E-206 T 22-04-2016 YE1343 955245832005fe78bf594c5d9806055a 310 SUPERFAMILY SSF53850 96 285 1.29E-29 T 22-04-2016 YE1343 955245832005fe78bf594c5d9806055a 310 Gene3D G3DSA:3.40.190.10 197 245 1.8E-11 T 22-04-2016 YE1343 955245832005fe78bf594c5d9806055a 310 Pfam PF03466 LysR substrate binding domain 97 249 7.7E-28 T 22-04-2016 IPR005119 LysR, substrate-binding YE1343 955245832005fe78bf594c5d9806055a 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 3.4E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE1343 955245832005fe78bf594c5d9806055a 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 3.4E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE1343 955245832005fe78bf594c5d9806055a 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 3.4E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE1343 955245832005fe78bf594c5d9806055a 310 PANTHER PTHR30579:SF4 6 301 5.2E-206 T 22-04-2016 YE1343 955245832005fe78bf594c5d9806055a 310 Gene3D G3DSA:3.40.190.10 97 196 1.7E-15 T 22-04-2016 YE2083 68f6a2261fa98d986dc215fde639391b 242 Gene3D G3DSA:3.40.50.2300 1 136 5.6E-30 T 22-04-2016 YE2083 68f6a2261fa98d986dc215fde639391b 242 SUPERFAMILY SSF52172 1 188 3.98E-31 T 22-04-2016 IPR011006 CheY-like superfamily YE2083 68f6a2261fa98d986dc215fde639391b 242 SMART SM00448 2 112 6.2E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE2083 68f6a2261fa98d986dc215fde639391b 242 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 2.1E-19 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YE2083 68f6a2261fa98d986dc215fde639391b 242 PANTHER PTHR26402 2 240 4.9E-158 T 22-04-2016 YE2083 68f6a2261fa98d986dc215fde639391b 242 PANTHER PTHR26402:SF548 2 240 4.9E-158 T 22-04-2016 YE2083 68f6a2261fa98d986dc215fde639391b 242 Pfam PF00072 Response regulator receiver domain 4 112 6.0E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE2083 68f6a2261fa98d986dc215fde639391b 242 Gene3D G3DSA:1.10.10.10 137 235 5.4E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2083 68f6a2261fa98d986dc215fde639391b 242 SMART SM00862 156 232 1.4E-18 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YE0668 e511cf13a217a42f786623c027ed1f79 454 Gene3D G3DSA:3.40.1390.10 10 90 1.5E-25 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 YE0668 e511cf13a217a42f786623c027ed1f79 454 SUPERFAMILY SSF53244 315 448 4.88E-37 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YE0668 e511cf13a217a42f786623c027ed1f79 454 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 449 34.462 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YE0668 e511cf13a217a42f786623c027ed1f79 454 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 30 448 2.3E-140 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YE0668 e511cf13a217a42f786623c027ed1f79 454 Gene3D G3DSA:3.90.190.20 315 451 7.3E-44 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YE0668 e511cf13a217a42f786623c027ed1f79 454 PANTHER PTHR23135 13 450 2.7E-170 T 22-04-2016 YE0668 e511cf13a217a42f786623c027ed1f79 454 Pfam PF01225 Mur ligase family, catalytic domain 25 93 2.0E-13 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 YE0668 e511cf13a217a42f786623c027ed1f79 454 SUPERFAMILY SSF53623 101 312 5.23E-58 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YE0668 e511cf13a217a42f786623c027ed1f79 454 SUPERFAMILY SSF63418 1 98 4.71E-28 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 YE0668 e511cf13a217a42f786623c027ed1f79 454 Gene3D G3DSA:3.40.1190.10 91 312 5.0E-76 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YE0668 e511cf13a217a42f786623c027ed1f79 454 PANTHER PTHR23135:SF3 13 450 2.7E-170 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YE0668 e511cf13a217a42f786623c027ed1f79 454 Pfam PF08245 Mur ligase middle domain 107 295 2.1E-47 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YE0668 e511cf13a217a42f786623c027ed1f79 454 Pfam PF02875 Mur ligase family, glutamate ligase domain 315 394 8.6E-15 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YE0729 26b16211a1a0ed4790a512cf2f76373f 834 Gene3D G3DSA:1.20.5.100 70 110 8.7E-24 T 22-04-2016 YE0729 26b16211a1a0ed4790a512cf2f76373f 834 PANTHER PTHR32282 183 820 2.7E-299 T 22-04-2016 YE0729 26b16211a1a0ed4790a512cf2f76373f 834 PANTHER PTHR32282:SF11 183 820 2.7E-299 T 22-04-2016 YE0729 26b16211a1a0ed4790a512cf2f76373f 834 Gene3D G3DSA:3.40.710.10 395 809 3.1E-107 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YE0729 26b16211a1a0ed4790a512cf2f76373f 834 Pfam PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal 1 93 1.4E-28 T 22-04-2016 IPR032730 Transglycosylase PBP1b, N-terminal transmembrane domain YE0729 26b16211a1a0ed4790a512cf2f76373f 834 Pfam PF00912 Transglycosylase 223 394 9.0E-55 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 YE0729 26b16211a1a0ed4790a512cf2f76373f 834 Pfam PF14814 Bifunctional transglycosylase second domain 127 211 7.9E-29 T 22-04-2016 IPR028166 Bifunctional transglycosylase second domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 YE0729 26b16211a1a0ed4790a512cf2f76373f 834 PIRSF PIRSF002799 53 834 0.0 T 22-04-2016 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 YE0729 26b16211a1a0ed4790a512cf2f76373f 834 SUPERFAMILY SSF52540 119 176 7.97E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0729 26b16211a1a0ed4790a512cf2f76373f 834 SUPERFAMILY SSF56601 426 790 1.2E-105 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YE0729 26b16211a1a0ed4790a512cf2f76373f 834 SUPERFAMILY SSF56601 376 398 1.2E-105 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YE0729 26b16211a1a0ed4790a512cf2f76373f 834 Gene3D G3DSA:3.30.2060.10 125 214 2.0E-33 T 22-04-2016 YE0729 26b16211a1a0ed4790a512cf2f76373f 834 SUPERFAMILY SSF53955 211 417 9.28E-66 T 22-04-2016 IPR023346 Lysozyme-like domain YE0729 26b16211a1a0ed4790a512cf2f76373f 834 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 83 809 0.0 T 22-04-2016 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 YE0729 26b16211a1a0ed4790a512cf2f76373f 834 Gene3D G3DSA:1.10.3810.10 219 394 1.0E-62 T 22-04-2016 YE0729 26b16211a1a0ed4790a512cf2f76373f 834 Pfam PF00905 Penicillin binding protein transpeptidase domain 487 735 1.6E-21 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 YE2052 30226ea3e2b010746d88b458a417f4f2 486 Hamap MF_01932 AMP nucleosidase [amn]. 5 486 58.445 T 22-04-2016 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 YE2052 30226ea3e2b010746d88b458a417f4f2 486 SUPERFAMILY SSF53167 11 486 5.63E-157 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 YE2052 30226ea3e2b010746d88b458a417f4f2 486 Gene3D G3DSA:3.30.1730.10 6 166 3.2E-59 T 22-04-2016 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 YE2052 30226ea3e2b010746d88b458a417f4f2 486 Gene3D G3DSA:3.40.50.1580 176 468 6.1E-115 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 YE2052 30226ea3e2b010746d88b458a417f4f2 486 Pfam PF10423 Bacterial AMP nucleoside phosphorylase N-terminus 14 164 5.4E-49 T 22-04-2016 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 YE2052 30226ea3e2b010746d88b458a417f4f2 486 PANTHER PTHR21234 182 228 6.9E-136 T 22-04-2016 IPR018017 Nucleoside phosphorylase YE2052 30226ea3e2b010746d88b458a417f4f2 486 PANTHER PTHR21234 251 486 6.9E-136 T 22-04-2016 IPR018017 Nucleoside phosphorylase YE2052 30226ea3e2b010746d88b458a417f4f2 486 Pfam PF01048 Phosphorylase superfamily 271 433 2.8E-18 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 YE2052 30226ea3e2b010746d88b458a417f4f2 486 PANTHER PTHR21234:SF11 182 228 6.9E-136 T 22-04-2016 YE2052 30226ea3e2b010746d88b458a417f4f2 486 PANTHER PTHR21234:SF11 251 486 6.9E-136 T 22-04-2016 YE2052 30226ea3e2b010746d88b458a417f4f2 486 TIGRFAM TIGR01717 AMP-nucleosdse: AMP nucleosidase 14 486 1.0E-223 T 22-04-2016 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 YE0723 83c2de06494f75a1ceb1db94ada33df8 440 PANTHER PTHR13734:SF47 1 305 2.0E-139 T 22-04-2016 YE0723 83c2de06494f75a1ceb1db94ada33df8 440 Pfam PF12626 Polymerase A arginine-rich C-terminus 313 432 1.3E-43 T 22-04-2016 IPR025866 Polymerase A arginine-rich C-terminal domain YE0723 83c2de06494f75a1ceb1db94ada33df8 440 PANTHER PTHR13734 1 305 2.0E-139 T 22-04-2016 YE0723 83c2de06494f75a1ceb1db94ada33df8 440 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 195 255 2.8E-20 T 22-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain YE0723 83c2de06494f75a1ceb1db94ada33df8 440 Gene3D G3DSA:1.10.3090.10 168 405 3.5E-50 T 22-04-2016 YE0723 83c2de06494f75a1ceb1db94ada33df8 440 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 3 432 1.7E-160 T 22-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 YE0723 83c2de06494f75a1ceb1db94ada33df8 440 SUPERFAMILY SSF81301 5 164 1.31E-40 T 22-04-2016 YE0723 83c2de06494f75a1ceb1db94ada33df8 440 Gene3D G3DSA:3.30.460.10 16 167 4.0E-50 T 22-04-2016 YE0723 83c2de06494f75a1ceb1db94ada33df8 440 SUPERFAMILY SSF81891 166 404 2.49E-51 T 22-04-2016 YE0723 83c2de06494f75a1ceb1db94ada33df8 440 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 2 431 38.22 T 22-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 YE0723 83c2de06494f75a1ceb1db94ada33df8 440 Pfam PF01743 Poly A polymerase head domain 34 168 9.2E-40 T 22-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 YE2420 de708655ae0d238f57d61d8a1f347ddf 187 SUPERFAMILY SSF89155 2 181 8.11E-46 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone YE2420 de708655ae0d238f57d61d8a1f347ddf 187 Pfam PF02613 Nitrate reductase delta subunit 48 148 1.9E-15 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone YE2420 de708655ae0d238f57d61d8a1f347ddf 187 PANTHER PTHR34227 1 187 2.1E-78 T 22-04-2016 YE2420 de708655ae0d238f57d61d8a1f347ddf 187 PANTHER PTHR34227:SF2 1 187 2.1E-78 T 22-04-2016 YE2420 de708655ae0d238f57d61d8a1f347ddf 187 Gene3D G3DSA:1.10.3480.10 1 182 6.9E-50 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone YE2420 de708655ae0d238f57d61d8a1f347ddf 187 PIRSF PIRSF004690 1 187 3.7E-63 T 22-04-2016 IPR026269 Tat proofreading chaperone DmsD-type YE3347 40fa5fb7a9a69e27160f1841e38bfd26 402 Pfam PF00482 Type II secretion system (T2SS), protein F 272 391 2.9E-23 T 22-04-2016 IPR018076 Type II secretion system F domain YE3347 40fa5fb7a9a69e27160f1841e38bfd26 402 Pfam PF00482 Type II secretion system (T2SS), protein F 69 191 3.5E-28 T 22-04-2016 IPR018076 Type II secretion system F domain YE3347 40fa5fb7a9a69e27160f1841e38bfd26 402 PANTHER PTHR30012:SF6 2 402 4.6E-136 T 22-04-2016 YE3347 40fa5fb7a9a69e27160f1841e38bfd26 402 PRINTS PR00812 Bacterial general secretion pathway protein F signature 163 191 7.2E-30 T 22-04-2016 IPR003004 GspF/PilC family YE3347 40fa5fb7a9a69e27160f1841e38bfd26 402 PRINTS PR00812 Bacterial general secretion pathway protein F signature 64 76 7.2E-30 T 22-04-2016 IPR003004 GspF/PilC family YE3347 40fa5fb7a9a69e27160f1841e38bfd26 402 PRINTS PR00812 Bacterial general secretion pathway protein F signature 366 380 7.2E-30 T 22-04-2016 IPR003004 GspF/PilC family YE3347 40fa5fb7a9a69e27160f1841e38bfd26 402 PRINTS PR00812 Bacterial general secretion pathway protein F signature 382 401 7.2E-30 T 22-04-2016 IPR003004 GspF/PilC family YE3347 40fa5fb7a9a69e27160f1841e38bfd26 402 PANTHER PTHR30012 2 402 4.6E-136 T 22-04-2016 YE4147 7f5660db38c95b36d434a3c17e294e1a 387 Gene3D G3DSA:1.10.1040.10 203 384 3.2E-48 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 YE4147 7f5660db38c95b36d434a3c17e294e1a 387 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 1 123 1.5E-24 T 22-04-2016 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 YE4147 7f5660db38c95b36d434a3c17e294e1a 387 SUPERFAMILY SSF48179 204 384 1.7E-46 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 YE4147 7f5660db38c95b36d434a3c17e294e1a 387 PRINTS PR00084 Mannitol dehydrogenase signature 3 13 1.3E-16 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YE4147 7f5660db38c95b36d434a3c17e294e1a 387 PRINTS PR00084 Mannitol dehydrogenase signature 150 163 1.3E-16 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YE4147 7f5660db38c95b36d434a3c17e294e1a 387 PRINTS PR00084 Mannitol dehydrogenase signature 114 127 1.3E-16 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YE4147 7f5660db38c95b36d434a3c17e294e1a 387 PRINTS PR00084 Mannitol dehydrogenase signature 170 185 1.3E-16 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YE4147 7f5660db38c95b36d434a3c17e294e1a 387 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 1 378 40.859 T 22-04-2016 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YE4147 7f5660db38c95b36d434a3c17e294e1a 387 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 150 162 - T 22-04-2016 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YE4147 7f5660db38c95b36d434a3c17e294e1a 387 Gene3D G3DSA:3.40.50.720 2 202 9.2E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain YE4147 7f5660db38c95b36d434a3c17e294e1a 387 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 148 372 1.0E-63 T 22-04-2016 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 YE4147 7f5660db38c95b36d434a3c17e294e1a 387 PANTHER PTHR30524 1 385 1.0E-218 T 22-04-2016 YE4147 7f5660db38c95b36d434a3c17e294e1a 387 PANTHER PTHR30524:SF0 1 385 1.0E-218 T 22-04-2016 YE4147 7f5660db38c95b36d434a3c17e294e1a 387 SUPERFAMILY SSF51735 1 203 4.08E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain YE0257 bbb558762936090de5204e9f2ba74376 207 Pfam PF02036 SCP-2 sterol transfer family 20 118 6.1E-21 T 22-04-2016 IPR003033 SCP2 sterol-binding domain YE0257 bbb558762936090de5204e9f2ba74376 207 SUPERFAMILY SSF55718 21 119 7.77E-9 T 22-04-2016 IPR003033 SCP2 sterol-binding domain YE0257 bbb558762936090de5204e9f2ba74376 207 PANTHER PTHR38693:SF1 1 206 7.1E-69 T 22-04-2016 YE0257 bbb558762936090de5204e9f2ba74376 207 PANTHER PTHR38693 1 206 7.1E-69 T 22-04-2016 YE1727 8915ed4e2c5edbe7b835f96e38da6796 406 PANTHER PTHR37422 17 393 1.5E-88 T 22-04-2016 YE1727 8915ed4e2c5edbe7b835f96e38da6796 406 PANTHER PTHR37422:SF1 17 393 1.5E-88 T 22-04-2016 YE1727 8915ed4e2c5edbe7b835f96e38da6796 406 Pfam PF04932 O-Antigen ligase 187 334 1.9E-14 T 22-04-2016 IPR007016 O-antigen ligase-related YE0972 5cb8c3d31150b4a8a07d84fa4b752afb 253 Hamap MF_01246 Chitooligosaccharide deacetylase [chbG]. 3 250 41.023 T 22-04-2016 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria GO:0000272|GO:0016811 YE0972 5cb8c3d31150b4a8a07d84fa4b752afb 253 Pfam PF04794 YdjC-like protein 5 241 3.2E-63 T 22-04-2016 IPR006879 Chitooligosaccharide deacetylase ChbG-like YE0972 5cb8c3d31150b4a8a07d84fa4b752afb 253 PANTHER PTHR31609 1 253 3.4E-99 T 22-04-2016 YE0972 5cb8c3d31150b4a8a07d84fa4b752afb 253 Gene3D G3DSA:3.20.20.370 1 252 8.5E-82 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 YE0972 5cb8c3d31150b4a8a07d84fa4b752afb 253 SUPERFAMILY SSF88713 1 253 8.67E-78 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 YE1779 3e6812c0eb8a629540b7bdb095ed12e7 454 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 7.4E-224 T 22-04-2016 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 YE1779 3e6812c0eb8a629540b7bdb095ed12e7 454 Gene3D G3DSA:3.30.1330.90 10 158 7.1E-55 T 22-04-2016 IPR029009 Allosteric substrate binding domain YE1779 3e6812c0eb8a629540b7bdb095ed12e7 454 Pfam PF03315 Serine dehydratase beta chain 3 155 6.5E-56 T 22-04-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 YE1779 3e6812c0eb8a629540b7bdb095ed12e7 454 PANTHER PTHR30182 2 454 0.0 T 22-04-2016 YE1779 3e6812c0eb8a629540b7bdb095ed12e7 454 SUPERFAMILY SSF143548 16 158 1.23E-45 T 22-04-2016 IPR029009 Allosteric substrate binding domain YE1779 3e6812c0eb8a629540b7bdb095ed12e7 454 PANTHER PTHR30182:SF4 2 454 0.0 T 22-04-2016 YE1779 3e6812c0eb8a629540b7bdb095ed12e7 454 Pfam PF03313 Serine dehydratase alpha chain 184 448 1.5E-96 T 22-04-2016 IPR005130 Serine dehydratase-like, alpha subunit YE1899 c254e5faf24178a3ec506537bb399a95 296 Pfam PF00005 ABC transporter 29 174 7.3E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE1899 c254e5faf24178a3ec506537bb399a95 296 SMART SM00382 36 222 5.5E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YE1899 c254e5faf24178a3ec506537bb399a95 296 Gene3D G3DSA:3.40.50.300 9 243 1.4E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1899 c254e5faf24178a3ec506537bb399a95 296 SUPERFAMILY SSF52540 7 238 2.81E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1899 c254e5faf24178a3ec506537bb399a95 296 PANTHER PTHR24220:SF533 12 281 5.7E-179 T 22-04-2016 YE1899 c254e5faf24178a3ec506537bb399a95 296 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE1899 c254e5faf24178a3ec506537bb399a95 296 PANTHER PTHR24220 12 281 5.7E-179 T 22-04-2016 YE2039 60e37a19ef9400774c817e16b2eafc5e 369 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 30 111 4.0E-16 T 22-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 YE2039 60e37a19ef9400774c817e16b2eafc5e 369 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 151 356 3.5E-16 T 22-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 YE2039 60e37a19ef9400774c817e16b2eafc5e 369 SUPERFAMILY SSF53187 140 361 1.59E-42 T 22-04-2016 YE2039 60e37a19ef9400774c817e16b2eafc5e 369 SUPERFAMILY SSF53187 16 106 1.59E-42 T 22-04-2016 YE2039 60e37a19ef9400774c817e16b2eafc5e 369 Gene3D G3DSA:3.40.630.10 18 245 8.3E-15 T 22-04-2016 YE2102 98a8a5c5826f139b1cc5cf5ce0391899 1177 Gene3D G3DSA:3.40.50.970 1 254 1.4E-110 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE2102 98a8a5c5826f139b1cc5cf5ce0391899 1177 SUPERFAMILY SSF52518 2 254 2.03E-72 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE2102 98a8a5c5826f139b1cc5cf5ce0391899 1177 PANTHER PTHR32154 1 1177 0.0 T 22-04-2016 YE2102 98a8a5c5826f139b1cc5cf5ce0391899 1177 Pfam PF12838 4Fe-4S dicluster domain 689 757 3.8E-9 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YE2102 98a8a5c5826f139b1cc5cf5ce0391899 1177 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 265 350 2.2E-15 T 22-04-2016 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II YE2102 98a8a5c5826f139b1cc5cf5ce0391899 1177 SUPERFAMILY SSF52518 794 1164 1.33E-117 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE2102 98a8a5c5826f139b1cc5cf5ce0391899 1177 Gene3D G3DSA:4.10.780.10 628 668 6.9E-21 T 22-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 YE2102 98a8a5c5826f139b1cc5cf5ce0391899 1177 PIRSF PIRSF000159 1 1177 0.0 T 22-04-2016 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 YE2102 98a8a5c5826f139b1cc5cf5ce0391899 1177 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 1 1168 0.0 T 22-04-2016 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 YE2102 98a8a5c5826f139b1cc5cf5ce0391899 1177 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 745 756 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YE2102 98a8a5c5826f139b1cc5cf5ce0391899 1177 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 689 700 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YE2102 98a8a5c5826f139b1cc5cf5ce0391899 1177 Gene3D G3DSA:3.40.50.970 795 1168 7.8E-130 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE2102 98a8a5c5826f139b1cc5cf5ce0391899 1177 Gene3D G3DSA:3.30.70.20 671 783 6.3E-22 T 22-04-2016 YE2102 98a8a5c5826f139b1cc5cf5ce0391899 1177 Pfam PF10371 Domain of unknown function 627 678 1.1E-23 T 22-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 YE2102 98a8a5c5826f139b1cc5cf5ce0391899 1177 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 13 243 8.6E-81 T 22-04-2016 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 YE2102 98a8a5c5826f139b1cc5cf5ce0391899 1177 SMART SM00890 622 679 9.7E-30 T 22-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 YE2102 98a8a5c5826f139b1cc5cf5ce0391899 1177 Gene3D G3DSA:3.40.920.10 417 617 9.4E-76 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 YE2102 98a8a5c5826f139b1cc5cf5ce0391899 1177 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 426 608 6.4E-35 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 YE2102 98a8a5c5826f139b1cc5cf5ce0391899 1177 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 957 1069 1.8E-8 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 YE2102 98a8a5c5826f139b1cc5cf5ce0391899 1177 Gene3D G3DSA:3.40.50.920 255 409 1.8E-59 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 YE2102 98a8a5c5826f139b1cc5cf5ce0391899 1177 PANTHER PTHR32154:SF0 1 1177 0.0 T 22-04-2016 YE2102 98a8a5c5826f139b1cc5cf5ce0391899 1177 SUPERFAMILY SSF54862 665 837 1.33E-22 T 22-04-2016 YE2102 98a8a5c5826f139b1cc5cf5ce0391899 1177 SUPERFAMILY SSF52922 255 409 2.57E-42 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 YE2102 98a8a5c5826f139b1cc5cf5ce0391899 1177 SUPERFAMILY SSF53323 417 668 9.94E-74 T 22-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 YE1270 c5148b0f9277d6aa990691b8de1e8403 136 Pfam PF03918 Cytochrome C biogenesis protein 2 118 3.0E-50 T 22-04-2016 IPR005616 CcmH/CycL/Ccl2/NrfF family YE1270 c5148b0f9277d6aa990691b8de1e8403 136 PANTHER PTHR30009:SF7 2 122 4.3E-31 T 22-04-2016 YE1270 c5148b0f9277d6aa990691b8de1e8403 136 PANTHER PTHR30009 2 122 4.3E-31 T 22-04-2016 YE3165 8d3a57550a378d67f379c7daf3f40e1c 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 21 41 2.1E-16 T 22-04-2016 IPR003849 Preprotein translocase YajC YE3165 8d3a57550a378d67f379c7daf3f40e1c 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 59 77 2.1E-16 T 22-04-2016 IPR003849 Preprotein translocase YajC YE3165 8d3a57550a378d67f379c7daf3f40e1c 110 SMART SM01323 19 102 1.9E-37 T 22-04-2016 IPR003849 Preprotein translocase YajC YE3165 8d3a57550a378d67f379c7daf3f40e1c 110 PANTHER PTHR33909:SF1 1 108 3.0E-36 T 22-04-2016 YE3165 8d3a57550a378d67f379c7daf3f40e1c 110 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 21 102 8.5E-33 T 22-04-2016 IPR003849 Preprotein translocase YajC YE3165 8d3a57550a378d67f379c7daf3f40e1c 110 PANTHER PTHR33909 1 108 3.0E-36 T 22-04-2016 YE3165 8d3a57550a378d67f379c7daf3f40e1c 110 Pfam PF02699 Preprotein translocase subunit 23 99 5.6E-26 T 22-04-2016 IPR003849 Preprotein translocase YajC YE2897 7eee3eb32ec3bd181f8264c5b6b910dc 81 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 81 1.4E-24 T 22-04-2016 IPR010034 Molybdopterin converting factor, subunit 1 GO:0006777 UniPathway: UPA00344 YE2897 7eee3eb32ec3bd181f8264c5b6b910dc 81 Gene3D G3DSA:3.10.20.30 1 81 2.9E-24 T 22-04-2016 IPR012675 Beta-grasp domain YE2897 7eee3eb32ec3bd181f8264c5b6b910dc 81 SUPERFAMILY SSF54285 1 81 5.05E-22 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp YE2897 7eee3eb32ec3bd181f8264c5b6b910dc 81 PANTHER PTHR33359 1 81 4.0E-26 T 22-04-2016 YE2897 7eee3eb32ec3bd181f8264c5b6b910dc 81 Pfam PF02597 ThiS family 4 81 3.0E-20 T 22-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 YE3361 3c00643ce8f48a1c8e76e60322c8a334 156 Gene3D G3DSA:1.10.10.10 10 57 6.7E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3361 3c00643ce8f48a1c8e76e60322c8a334 156 PANTHER PTHR30154 10 156 5.5E-53 T 22-04-2016 YE3361 3c00643ce8f48a1c8e76e60322c8a334 156 SUPERFAMILY SSF46785 6 92 1.99E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3361 3c00643ce8f48a1c8e76e60322c8a334 156 Pfam PF01037 Lrp/AsnC ligand binding domain 72 146 3.8E-18 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain YE3361 3c00643ce8f48a1c8e76e60322c8a334 156 Gene3D G3DSA:3.30.70.920 59 143 3.7E-25 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain YE3361 3c00643ce8f48a1c8e76e60322c8a334 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 1.8E-13 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 YE3361 3c00643ce8f48a1c8e76e60322c8a334 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 1.8E-13 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 YE3361 3c00643ce8f48a1c8e76e60322c8a334 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 1.8E-13 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 YE3361 3c00643ce8f48a1c8e76e60322c8a334 156 SMART SM00344 9 115 1.3E-31 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 YE3361 3c00643ce8f48a1c8e76e60322c8a334 156 Pfam PF13412 Winged helix-turn-helix DNA-binding 9 53 1.4E-16 T 22-04-2016 YE3361 3c00643ce8f48a1c8e76e60322c8a334 156 PANTHER PTHR30154:SF28 10 156 5.5E-53 T 22-04-2016 YE3361 3c00643ce8f48a1c8e76e60322c8a334 156 SUPERFAMILY SSF54909 66 154 2.41E-16 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel YE2783 7514e2e88a8ca8058b1fc5776e5f92b6 213 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 10 199 2.5E-43 T 22-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 YE2783 7514e2e88a8ca8058b1fc5776e5f92b6 213 TIGRFAM TIGR00235 udk: uridine kinase 6 213 5.0E-96 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 YE2783 7514e2e88a8ca8058b1fc5776e5f92b6 213 Gene3D G3DSA:3.40.50.300 3 205 5.9E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2783 7514e2e88a8ca8058b1fc5776e5f92b6 213 PRINTS PR00988 Uridine kinase signature 179 192 4.9E-38 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 YE2783 7514e2e88a8ca8058b1fc5776e5f92b6 213 PRINTS PR00988 Uridine kinase signature 87 102 4.9E-38 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 YE2783 7514e2e88a8ca8058b1fc5776e5f92b6 213 PRINTS PR00988 Uridine kinase signature 8 25 4.9E-38 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 YE2783 7514e2e88a8ca8058b1fc5776e5f92b6 213 PRINTS PR00988 Uridine kinase signature 42 53 4.9E-38 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 YE2783 7514e2e88a8ca8058b1fc5776e5f92b6 213 PRINTS PR00988 Uridine kinase signature 143 153 4.9E-38 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 YE2783 7514e2e88a8ca8058b1fc5776e5f92b6 213 PRINTS PR00988 Uridine kinase signature 157 168 4.9E-38 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 YE2783 7514e2e88a8ca8058b1fc5776e5f92b6 213 Hamap MF_00551 Uridine kinase [udk]. 5 213 41.317 T 22-04-2016 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 YE2783 7514e2e88a8ca8058b1fc5776e5f92b6 213 SUPERFAMILY SSF52540 8 205 4.77E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2783 7514e2e88a8ca8058b1fc5776e5f92b6 213 PANTHER PTHR10285 1 213 2.1E-95 T 22-04-2016 YE0789 c4497e05adcc0d41144fe8c075e77400 208 Pfam PF01323 DSBA-like thioredoxin domain 79 181 3.2E-7 T 22-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 YE0789 c4497e05adcc0d41144fe8c075e77400 208 SUPERFAMILY SSF52833 39 185 1.6E-19 T 22-04-2016 IPR012336 Thioredoxin-like fold YE0789 c4497e05adcc0d41144fe8c075e77400 208 Gene3D G3DSA:3.40.30.10 38 201 1.5E-24 T 22-04-2016 IPR012336 Thioredoxin-like fold YE0789 c4497e05adcc0d41144fe8c075e77400 208 PANTHER PTHR35891 34 202 6.5E-14 T 22-04-2016 YE0615 020bcb421fbaf8d48fd2e43a117cb14b 312 Gene3D G3DSA:2.40.30.30 181 306 8.5E-40 T 22-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 YE0615 020bcb421fbaf8d48fd2e43a117cb14b 312 SUPERFAMILY SSF52374 15 175 1.49E-36 T 22-04-2016 YE0615 020bcb421fbaf8d48fd2e43a117cb14b 312 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 18 49 1.5E-7 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 YE0615 020bcb421fbaf8d48fd2e43a117cb14b 312 PIRSF PIRSF004491 1 310 3.8E-103 T 22-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 YE0615 020bcb421fbaf8d48fd2e43a117cb14b 312 PANTHER PTHR22749 1 308 2.3E-145 T 22-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 YE0615 020bcb421fbaf8d48fd2e43a117cb14b 312 Pfam PF06574 FAD synthetase 12 167 8.1E-57 T 22-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 YE0615 020bcb421fbaf8d48fd2e43a117cb14b 312 Pfam PF01687 Riboflavin kinase 184 306 3.8E-38 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 YE0615 020bcb421fbaf8d48fd2e43a117cb14b 312 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 306 2.5E-114 T 22-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 YE0615 020bcb421fbaf8d48fd2e43a117cb14b 312 PANTHER PTHR22749:SF0 1 308 2.3E-145 T 22-04-2016 YE0615 020bcb421fbaf8d48fd2e43a117cb14b 312 SUPERFAMILY SSF82114 174 307 2.83E-44 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 YE0615 020bcb421fbaf8d48fd2e43a117cb14b 312 Gene3D G3DSA:3.40.50.620 1 180 7.7E-67 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YE0615 020bcb421fbaf8d48fd2e43a117cb14b 312 SMART SM00904 183 307 1.7E-62 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 YE0107 1f7635f0ce76ae2cb3fb923f18bfaf62 342 PANTHER PTHR30146 9 342 6.7E-157 T 22-04-2016 YE0107 1f7635f0ce76ae2cb3fb923f18bfaf62 342 SUPERFAMILY SSF53822 68 340 2.36E-95 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YE0107 1f7635f0ce76ae2cb3fb923f18bfaf62 342 PANTHER PTHR30146:SF4 9 342 6.7E-157 T 22-04-2016 YE0107 1f7635f0ce76ae2cb3fb923f18bfaf62 342 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 55 1.7E-17 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE0107 1f7635f0ce76ae2cb3fb923f18bfaf62 342 Gene3D G3DSA:3.40.50.2300 176 338 9.2E-68 T 22-04-2016 YE0107 1f7635f0ce76ae2cb3fb923f18bfaf62 342 ProSitePatterns PS00356 LacI-type HTH domain signature. 12 30 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE0107 1f7635f0ce76ae2cb3fb923f18bfaf62 342 Gene3D G3DSA:1.10.260.40 9 65 1.5E-20 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE0107 1f7635f0ce76ae2cb3fb923f18bfaf62 342 Pfam PF13377 Periplasmic binding protein-like domain 176 337 1.6E-43 T 22-04-2016 YE0107 1f7635f0ce76ae2cb3fb923f18bfaf62 342 Gene3D G3DSA:3.40.50.2300 66 175 3.7E-39 T 22-04-2016 YE0107 1f7635f0ce76ae2cb3fb923f18bfaf62 342 SMART SM00354 9 79 2.5E-27 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE0107 1f7635f0ce76ae2cb3fb923f18bfaf62 342 SUPERFAMILY SSF47413 8 67 8.16E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE3384 5b1a4ffb4976e91508f11116ce876434 232 SMART SM00448 3 114 2.4E-37 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE3384 5b1a4ffb4976e91508f11116ce876434 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 228 3.1E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YE3384 5b1a4ffb4976e91508f11116ce876434 232 Gene3D G3DSA:3.40.50.2300 5 125 4.9E-36 T 22-04-2016 YE3384 5b1a4ffb4976e91508f11116ce876434 232 Pfam PF00072 Response regulator receiver domain 5 114 1.1E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE3384 5b1a4ffb4976e91508f11116ce876434 232 SUPERFAMILY SSF52172 2 129 3.84E-37 T 22-04-2016 IPR011006 CheY-like superfamily YE3384 5b1a4ffb4976e91508f11116ce876434 232 PANTHER PTHR26402:SF573 3 228 5.6E-151 T 22-04-2016 YE3384 5b1a4ffb4976e91508f11116ce876434 232 Gene3D G3DSA:1.10.10.10 132 229 6.8E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3384 5b1a4ffb4976e91508f11116ce876434 232 SUPERFAMILY SSF46894 129 229 5.39E-26 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YE3384 5b1a4ffb4976e91508f11116ce876434 232 PANTHER PTHR26402 3 228 5.6E-151 T 22-04-2016 YE3384 5b1a4ffb4976e91508f11116ce876434 232 SMART SM00862 151 228 2.0E-20 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YE1300 9ba6b8fef0c467b692990c82ae268932 686 Gene3D G3DSA:3.40.30.10 568 681 6.2E-14 T 22-04-2016 IPR012336 Thioredoxin-like fold YE1300 9ba6b8fef0c467b692990c82ae268932 686 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 288 497 5.6E-8 T 22-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 YE1300 9ba6b8fef0c467b692990c82ae268932 686 SUPERFAMILY SSF52833 563 679 1.69E-12 T 22-04-2016 IPR012336 Thioredoxin-like fold YE1300 9ba6b8fef0c467b692990c82ae268932 686 PANTHER PTHR32234 1 686 6.2E-175 T 22-04-2016 YE1300 9ba6b8fef0c467b692990c82ae268932 686 PANTHER PTHR32234:SF3 1 686 6.2E-175 T 22-04-2016 YE1300 9ba6b8fef0c467b692990c82ae268932 686 Pfam PF13899 Thioredoxin-like 571 652 8.8E-13 T 22-04-2016 YE1300 9ba6b8fef0c467b692990c82ae268932 686 Pfam PF11412 Disulphide bond corrector protein DsbC 40 146 1.4E-17 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain YE1300 9ba6b8fef0c467b692990c82ae268932 686 ProSitePatterns PS00194 Thioredoxin family active site. 590 608 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 YE2576 f078e88914a593a97646ecb94a7b3630 165 Pfam PF01584 CheW-like domain 18 154 7.4E-37 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 YE2576 f078e88914a593a97646ecb94a7b3630 165 SMART SM00260 14 151 8.7E-43 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 YE2576 f078e88914a593a97646ecb94a7b3630 165 Gene3D G3DSA:2.40.50.180 56 92 1.2E-10 T 22-04-2016 YE2576 f078e88914a593a97646ecb94a7b3630 165 PANTHER PTHR22617 1 164 1.9E-55 T 22-04-2016 YE2576 f078e88914a593a97646ecb94a7b3630 165 SUPERFAMILY SSF50341 17 157 8.11E-39 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 YE2576 f078e88914a593a97646ecb94a7b3630 165 Gene3D G3DSA:2.30.30.40 93 144 5.8E-9 T 22-04-2016 YE1112 b8449da83904a972415eae4617981304 857 SUPERFAMILY SSF141729 80 192 2.62E-31 T 22-04-2016 YE1112 b8449da83904a972415eae4617981304 857 PANTHER PTHR30451 23 857 0.0 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YE1112 b8449da83904a972415eae4617981304 857 Pfam PF00577 Outer membrane usher protein 218 765 2.2E-194 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YE1112 b8449da83904a972415eae4617981304 857 Pfam PF13953 PapC C-terminal domain 774 840 1.5E-25 T 22-04-2016 IPR025949 PapC-like, C-terminal domain YE1112 b8449da83904a972415eae4617981304 857 PANTHER PTHR30451:SF2 23 857 0.0 T 22-04-2016 YE1112 b8449da83904a972415eae4617981304 857 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 329 339 - T 22-04-2016 IPR018030 Fimbrial membrane usher, conserved site YE1112 b8449da83904a972415eae4617981304 857 Pfam PF13954 PapC N-terminal domain 55 201 7.6E-48 T 22-04-2016 IPR025885 PapC, N-terminal domain GO:0005515 YE3412 3516b5e1cbe5a2d0fd151ec6e6de69e5 489 Pfam PF13751 Transposase DDE domain 324 441 1.1E-24 T 22-04-2016 IPR025668 Transposase DDE domain YE3412 3516b5e1cbe5a2d0fd151ec6e6de69e5 489 PANTHER PTHR33408 1 481 2.5E-27 T 22-04-2016 YE3412 3516b5e1cbe5a2d0fd151ec6e6de69e5 489 Pfam PF05598 Transposase domain (DUF772) 52 127 4.1E-24 T 22-04-2016 IPR008490 Transposase InsH, N-terminal YE0268 53fa07c086cf9eca103dfa8bc88171d5 729 SUPERFAMILY SSF48179 621 714 2.21E-23 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 YE0268 53fa07c086cf9eca103dfa8bc88171d5 729 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 493 517 - T 22-04-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 YE0268 53fa07c086cf9eca103dfa8bc88171d5 729 SUPERFAMILY SSF51735 314 495 1.66E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain YE0268 53fa07c086cf9eca103dfa8bc88171d5 729 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 496 592 3.1E-27 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 YE0268 53fa07c086cf9eca103dfa8bc88171d5 729 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 715 52.549 T 22-04-2016 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 YE0268 53fa07c086cf9eca103dfa8bc88171d5 729 Gene3D G3DSA:3.40.50.720 309 497 1.4E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain YE0268 53fa07c086cf9eca103dfa8bc88171d5 729 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 714 0.0 T 22-04-2016 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 YE0268 53fa07c086cf9eca103dfa8bc88171d5 729 Gene3D G3DSA:1.10.1040.10 498 592 2.3E-22 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 YE0268 53fa07c086cf9eca103dfa8bc88171d5 729 PANTHER PTHR23309:SF18 8 715 0.0 T 22-04-2016 YE0268 53fa07c086cf9eca103dfa8bc88171d5 729 SUPERFAMILY SSF48179 495 612 2.55E-29 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 YE0268 53fa07c086cf9eca103dfa8bc88171d5 729 PANTHER PTHR23309 8 715 0.0 T 22-04-2016 YE0268 53fa07c086cf9eca103dfa8bc88171d5 729 Gene3D G3DSA:3.90.226.10 4 204 1.3E-60 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YE0268 53fa07c086cf9eca103dfa8bc88171d5 729 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 205 6.6E-42 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 YE0268 53fa07c086cf9eca103dfa8bc88171d5 729 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 YE0268 53fa07c086cf9eca103dfa8bc88171d5 729 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 316 494 1.5E-60 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 YE0268 53fa07c086cf9eca103dfa8bc88171d5 729 Gene3D G3DSA:1.10.1040.10 632 711 1.9E-18 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 YE0268 53fa07c086cf9eca103dfa8bc88171d5 729 SUPERFAMILY SSF52096 2 303 2.56E-70 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YE2507 02e3018a6a987c4037cbb24927afca98 452 PANTHER PTHR40033 5 452 2.5E-142 T 22-04-2016 YE2507 02e3018a6a987c4037cbb24927afca98 452 Pfam PF03390 2-hydroxycarboxylate transporter family 37 445 3.9E-148 T 22-04-2016 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 YE2507 02e3018a6a987c4037cbb24927afca98 452 PIRSF PIRSF005348 17 452 8.3E-159 T 22-04-2016 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 YE1518 01cb8587eedff643cc8f916d7ab33630 758 SUPERFAMILY SSF81923 1 141 2.49E-58 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 YE1518 01cb8587eedff643cc8f916d7ab33630 758 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 652 732 4.9E-24 T 22-04-2016 IPR019489 Clp ATPase, C-terminal YE1518 01cb8587eedff643cc8f916d7ab33630 758 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 301 313 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 YE1518 01cb8587eedff643cc8f916d7ab33630 758 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 517 535 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 YE1518 01cb8587eedff643cc8f916d7ab33630 758 SUPERFAMILY SSF52540 168 426 1.01E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1518 01cb8587eedff643cc8f916d7ab33630 758 SMART SM00382 205 351 1.2E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YE1518 01cb8587eedff643cc8f916d7ab33630 758 SMART SM00382 486 653 2.0E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain YE1518 01cb8587eedff643cc8f916d7ab33630 758 Gene3D G3DSA:3.40.50.300 442 662 2.9E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1518 01cb8587eedff643cc8f916d7ab33630 758 Pfam PF07724 AAA domain (Cdc48 subfamily) 485 646 1.1E-48 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 YE1518 01cb8587eedff643cc8f916d7ab33630 758 SUPERFAMILY SSF52540 436 747 1.89E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1518 01cb8587eedff643cc8f916d7ab33630 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 594 608 1.2E-36 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YE1518 01cb8587eedff643cc8f916d7ab33630 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 490 508 1.2E-36 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YE1518 01cb8587eedff643cc8f916d7ab33630 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 561 579 1.2E-36 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YE1518 01cb8587eedff643cc8f916d7ab33630 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 532 550 1.2E-36 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YE1518 01cb8587eedff643cc8f916d7ab33630 758 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 732 0.0 T 22-04-2016 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 YE1518 01cb8587eedff643cc8f916d7ab33630 758 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 210 341 8.4E-13 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 YE1518 01cb8587eedff643cc8f916d7ab33630 758 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 1.1E-14 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 YE1518 01cb8587eedff643cc8f916d7ab33630 758 SMART SM01086 652 743 1.8E-34 T 22-04-2016 IPR019489 Clp ATPase, C-terminal YE1518 01cb8587eedff643cc8f916d7ab33630 758 Gene3D G3DSA:1.10.8.60 351 434 1.1E-30 T 22-04-2016 YE1518 01cb8587eedff643cc8f916d7ab33630 758 Gene3D G3DSA:3.40.50.300 168 349 5.2E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1518 01cb8587eedff643cc8f916d7ab33630 758 PANTHER PTHR11638 1 754 0.0 T 22-04-2016 YE1518 01cb8587eedff643cc8f916d7ab33630 758 PANTHER PTHR11638:SF111 1 754 0.0 T 22-04-2016 YE1518 01cb8587eedff643cc8f916d7ab33630 758 Gene3D G3DSA:1.10.1780.10 1 141 1.1E-44 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 YE1518 01cb8587eedff643cc8f916d7ab33630 758 Gene3D G3DSA:1.10.8.60 663 752 7.7E-32 T 22-04-2016 YE2399 2f32a6e0dccd67acead2b070ab868942 271 SUPERFAMILY SSF117396 1 251 4.45E-65 T 22-04-2016 IPR002763 Protein of unknown function DUF72 YE2399 2f32a6e0dccd67acead2b070ab868942 271 PANTHER PTHR30348:SF3 1 267 2.6E-89 T 22-04-2016 YE2399 2f32a6e0dccd67acead2b070ab868942 271 PANTHER PTHR30348 1 267 2.6E-89 T 22-04-2016 YE2399 2f32a6e0dccd67acead2b070ab868942 271 Pfam PF01904 Protein of unknown function DUF72 20 248 2.1E-51 T 22-04-2016 IPR002763 Protein of unknown function DUF72 YE2399 2f32a6e0dccd67acead2b070ab868942 271 Gene3D G3DSA:3.20.20.410 1 259 3.8E-69 T 22-04-2016 IPR002763 Protein of unknown function DUF72 YE4052 8ad50383df74140ce44e1e4766787e31 492 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 353 371 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site YE4052 8ad50383df74140ce44e1e4766787e31 492 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 344 362 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site YE4052 8ad50383df74140ce44e1e4766787e31 492 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 335 353 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site YE4052 8ad50383df74140ce44e1e4766787e31 492 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 326 344 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site YE4052 8ad50383df74140ce44e1e4766787e31 492 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 362 380 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site YE4052 8ad50383df74140ce44e1e4766787e31 492 SUPERFAMILY SSF51120 222 346 9.29E-26 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal YE4052 8ad50383df74140ce44e1e4766787e31 492 Gene3D G3DSA:3.40.390.10 34 219 6.3E-30 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 YE4052 8ad50383df74140ce44e1e4766787e31 492 Pfam PF08548 Peptidase M10 serralysin C terminal 219 485 1.8E-74 T 22-04-2016 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 YE4052 8ad50383df74140ce44e1e4766787e31 492 PRINTS PR00313 NodO calcium binding signature 384 393 2.6E-11 T 22-04-2016 YE4052 8ad50383df74140ce44e1e4766787e31 492 PRINTS PR00313 NodO calcium binding signature 357 365 2.6E-11 T 22-04-2016 YE4052 8ad50383df74140ce44e1e4766787e31 492 PRINTS PR00313 NodO calcium binding signature 336 347 2.6E-11 T 22-04-2016 YE4052 8ad50383df74140ce44e1e4766787e31 492 PRINTS PR00313 NodO calcium binding signature 348 356 2.6E-11 T 22-04-2016 YE4052 8ad50383df74140ce44e1e4766787e31 492 PANTHER PTHR36921 359 491 9.2E-63 T 22-04-2016 YE4052 8ad50383df74140ce44e1e4766787e31 492 PANTHER PTHR36921 18 321 9.2E-63 T 22-04-2016 YE4052 8ad50383df74140ce44e1e4766787e31 492 Gene3D G3DSA:2.150.10.10 299 458 2.3E-34 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal YE4052 8ad50383df74140ce44e1e4766787e31 492 Gene3D G3DSA:2.150.10.10 257 263 2.3E-34 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal YE4052 8ad50383df74140ce44e1e4766787e31 492 SMART SM00235 35 202 0.0025 T 22-04-2016 IPR006026 Peptidase, metallopeptidase GO:0006508|GO:0008237|GO:0008270 YE4052 8ad50383df74140ce44e1e4766787e31 492 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 320 337 0.042 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 YE4052 8ad50383df74140ce44e1e4766787e31 492 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 374 391 0.25 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 YE4052 8ad50383df74140ce44e1e4766787e31 492 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 357 373 0.0038 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 YE4052 8ad50383df74140ce44e1e4766787e31 492 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 303 319 2.1 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 YE4052 8ad50383df74140ce44e1e4766787e31 492 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 338 355 0.0022 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 YE4052 8ad50383df74140ce44e1e4766787e31 492 SUPERFAMILY SSF51120 342 484 1.7E-25 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal YE4052 8ad50383df74140ce44e1e4766787e31 492 SUPERFAMILY SSF55486 21 216 1.78E-33 T 22-04-2016 YE2199 7461bbecdeb96d5456ce6c050e8e12ce 871 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 729 54.883 T 22-04-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 YE2199 7461bbecdeb96d5456ce6c050e8e12ce 871 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 641 7.7E-257 T 22-04-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 YE2199 7461bbecdeb96d5456ce6c050e8e12ce 871 SUPERFAMILY SSF57783 751 813 3.57E-19 T 22-04-2016 YE2199 7461bbecdeb96d5456ce6c050e8e12ce 871 SUPERFAMILY SSF57783 709 749 2.72E-7 T 22-04-2016 YE2199 7461bbecdeb96d5456ce6c050e8e12ce 871 PANTHER PTHR11390 1 37 0.0 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 YE2199 7461bbecdeb96d5456ce6c050e8e12ce 871 PANTHER PTHR11390 73 782 0.0 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 YE2199 7461bbecdeb96d5456ce6c050e8e12ce 871 Pfam PF01751 Toprim domain 5 148 7.7E-33 T 22-04-2016 IPR006171 Toprim domain YE2199 7461bbecdeb96d5456ce6c050e8e12ce 871 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 715 750 1.0E-11 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 YE2199 7461bbecdeb96d5456ce6c050e8e12ce 871 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 603 628 7.4E-6 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 YE2199 7461bbecdeb96d5456ce6c050e8e12ce 871 SMART SM00437 278 533 6.0E-121 T 22-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 YE2199 7461bbecdeb96d5456ce6c050e8e12ce 871 SUPERFAMILY SSF56712 3 615 2.49E-202 T 22-04-2016 IPR023405 DNA topoisomerase, type IA, core domain YE2199 7461bbecdeb96d5456ce6c050e8e12ce 871 Gene3D G3DSA:3.40.50.140 1 169 1.4E-58 T 22-04-2016 IPR006171 Toprim domain YE2199 7461bbecdeb96d5456ce6c050e8e12ce 871 Pfam PF01131 DNA topoisomerase 163 571 6.3E-127 T 22-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 YE2199 7461bbecdeb96d5456ce6c050e8e12ce 871 SMART SM00436 139 227 3.4E-48 T 22-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 YE2199 7461bbecdeb96d5456ce6c050e8e12ce 871 SMART SM00493 3 138 5.9E-34 T 22-04-2016 IPR006171 Toprim domain YE2199 7461bbecdeb96d5456ce6c050e8e12ce 871 Gene3D G3DSA:2.70.20.10 219 339 1.0E-29 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 YE2199 7461bbecdeb96d5456ce6c050e8e12ce 871 Gene3D G3DSA:2.70.20.10 344 479 1.0E-35 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 YE2199 7461bbecdeb96d5456ce6c050e8e12ce 871 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 315 329 - T 22-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 YE2199 7461bbecdeb96d5456ce6c050e8e12ce 871 Gene3D G3DSA:1.10.460.10 480 602 3.7E-58 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 YE2199 7461bbecdeb96d5456ce6c050e8e12ce 871 Gene3D G3DSA:1.10.460.10 170 217 3.7E-58 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 YE2199 7461bbecdeb96d5456ce6c050e8e12ce 871 Pfam PF08272 Topoisomerase I zinc-ribbon-like 764 799 3.5E-12 T 22-04-2016 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 YE2199 7461bbecdeb96d5456ce6c050e8e12ce 871 Pfam PF08272 Topoisomerase I zinc-ribbon-like 830 869 2.5E-23 T 22-04-2016 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 YE2199 7461bbecdeb96d5456ce6c050e8e12ce 871 SUPERFAMILY SSF57783 815 870 5.78E-23 T 22-04-2016 YE2199 7461bbecdeb96d5456ce6c050e8e12ce 871 Gene3D G3DSA:3.30.65.10 603 635 2.9E-11 T 22-04-2016 YE2199 7461bbecdeb96d5456ce6c050e8e12ce 871 Gene3D G3DSA:3.30.65.10 713 749 2.6E-11 T 22-04-2016 YE2199 7461bbecdeb96d5456ce6c050e8e12ce 871 Gene3D G3DSA:3.30.65.10 751 812 1.4E-26 T 22-04-2016 YE2199 7461bbecdeb96d5456ce6c050e8e12ce 871 PANTHER PTHR11390:SF27 1 37 0.0 T 22-04-2016 YE2199 7461bbecdeb96d5456ce6c050e8e12ce 871 PANTHER PTHR11390:SF27 73 782 0.0 T 22-04-2016 YE2199 7461bbecdeb96d5456ce6c050e8e12ce 871 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 112 125 6.1E-37 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 YE2199 7461bbecdeb96d5456ce6c050e8e12ce 871 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 197 215 6.1E-37 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 YE2199 7461bbecdeb96d5456ce6c050e8e12ce 871 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 396 412 6.1E-37 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 YE2199 7461bbecdeb96d5456ce6c050e8e12ce 871 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 320 329 6.1E-37 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 YE2199 7461bbecdeb96d5456ce6c050e8e12ce 871 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 496 510 6.1E-37 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 YE2199 7461bbecdeb96d5456ce6c050e8e12ce 871 Gene3D G3DSA:2.20.25.10 814 871 6.5E-32 T 22-04-2016 YE2654 fef57836d43281049d85ec7fd3152fed 551 SUPERFAMILY SSF55874 419 548 2.88E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE2654 fef57836d43281049d85ec7fd3152fed 551 Gene3D G3DSA:3.30.450.20 226 290 5.1E-8 T 22-04-2016 YE2654 fef57836d43281049d85ec7fd3152fed 551 PANTHER PTHR24423:SF472 77 178 5.2E-107 T 22-04-2016 YE2654 fef57836d43281049d85ec7fd3152fed 551 Pfam PF17203 Single cache domain 3 72 184 3.8E-16 T 22-04-2016 IPR033463 Single cache domain 3 YE2654 fef57836d43281049d85ec7fd3152fed 551 Gene3D G3DSA:3.30.565.10 418 549 5.1E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE2654 fef57836d43281049d85ec7fd3152fed 551 PANTHER PTHR24423:SF472 211 549 5.2E-107 T 22-04-2016 YE2654 fef57836d43281049d85ec7fd3152fed 551 SUPERFAMILY SSF55785 235 329 5.64E-9 T 22-04-2016 IPR000014 PAS domain YE2654 fef57836d43281049d85ec7fd3152fed 551 PANTHER PTHR24423 211 549 5.2E-107 T 22-04-2016 YE2654 fef57836d43281049d85ec7fd3152fed 551 PANTHER PTHR24423 77 178 5.2E-107 T 22-04-2016 YE2654 fef57836d43281049d85ec7fd3152fed 551 SUPERFAMILY SSF103190 58 186 4.32E-33 T 22-04-2016 IPR029151 Periplasmic sensor domain-like YE2654 fef57836d43281049d85ec7fd3152fed 551 SMART SM00387 440 551 3.9E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE2654 fef57836d43281049d85ec7fd3152fed 551 Gene3D G3DSA:3.30.450.20 54 187 1.1E-44 T 22-04-2016 YE2654 fef57836d43281049d85ec7fd3152fed 551 SMART SM00091 233 301 3.7E-7 T 22-04-2016 IPR000014 PAS domain YE2654 fef57836d43281049d85ec7fd3152fed 551 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 342 386 1.9E-7 T 22-04-2016 YE2654 fef57836d43281049d85ec7fd3152fed 551 Gene3D G3DSA:1.10.287.130 330 399 6.9E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE2654 fef57836d43281049d85ec7fd3152fed 551 SUPERFAMILY SSF55890 344 387 3.4E-7 T 22-04-2016 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 YE2654 fef57836d43281049d85ec7fd3152fed 551 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 443 550 6.4E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE2654 fef57836d43281049d85ec7fd3152fed 551 PRINTS PR00344 Bacterial sensor protein C-terminal signature 499 509 1.4E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE2654 fef57836d43281049d85ec7fd3152fed 551 PRINTS PR00344 Bacterial sensor protein C-terminal signature 481 495 1.4E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE2654 fef57836d43281049d85ec7fd3152fed 551 PRINTS PR00344 Bacterial sensor protein C-terminal signature 535 548 1.4E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE2654 fef57836d43281049d85ec7fd3152fed 551 PRINTS PR00344 Bacterial sensor protein C-terminal signature 511 529 1.4E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE2024 5a64e2fd92675dcf9af8c58621f9582a 222 SUPERFAMILY SSF52540 1 207 3.9E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2024 5a64e2fd92675dcf9af8c58621f9582a 222 Gene3D G3DSA:3.40.50.300 4 217 5.0E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2024 5a64e2fd92675dcf9af8c58621f9582a 222 PANTHER PTHR21343:SF12 1 220 3.9E-162 T 22-04-2016 YE2024 5a64e2fd92675dcf9af8c58621f9582a 222 PANTHER PTHR21343 1 220 3.9E-162 T 22-04-2016 YE2024 5a64e2fd92675dcf9af8c58621f9582a 222 PIRSF PIRSF006755 1 221 3.8E-68 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 YE2024 5a64e2fd92675dcf9af8c58621f9582a 222 Pfam PF13500 AAA domain 4 207 7.0E-30 T 22-04-2016 YE2024 5a64e2fd92675dcf9af8c58621f9582a 222 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 172 3.0E-44 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 YE2024 5a64e2fd92675dcf9af8c58621f9582a 222 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 207 24.556 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 YE2032 61ab5ea7ada402df87aed03ffe7afac8 118 PANTHER PTHR39426 1 115 4.9E-18 T 22-04-2016 YE2032 61ab5ea7ada402df87aed03ffe7afac8 118 TIGRFAM TIGR01550 DOC_P1: death-on-curing family protein 23 115 1.2E-19 T 22-04-2016 IPR006440 Death on curing protein GO:0016301 YE2032 61ab5ea7ada402df87aed03ffe7afac8 118 PIRSF PIRSF018297 1 118 1.1E-29 T 22-04-2016 IPR006440 Death on curing protein GO:0016301 YE2032 61ab5ea7ada402df87aed03ffe7afac8 118 PANTHER PTHR39426:SF1 1 115 4.9E-18 T 22-04-2016 YE2032 61ab5ea7ada402df87aed03ffe7afac8 118 SUPERFAMILY SSF140931 25 85 6.54E-6 T 22-04-2016 IPR003812 Fido domain YE2032 61ab5ea7ada402df87aed03ffe7afac8 118 Pfam PF02661 Fic/DOC family 36 79 2.0E-7 T 22-04-2016 IPR003812 Fido domain YE2625 825a5535bb0cf71d163d624d9b99eed6 249 Gene3D G3DSA:3.30.420.10 79 238 1.5E-30 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE2625 825a5535bb0cf71d163d624d9b99eed6 249 PANTHER PTHR32552 16 247 1.0E-55 T 22-04-2016 YE2625 825a5535bb0cf71d163d624d9b99eed6 249 Pfam PF13276 HTH-like domain 11 61 1.5E-10 T 22-04-2016 IPR025948 HTH-like domain YE2625 825a5535bb0cf71d163d624d9b99eed6 249 SUPERFAMILY SSF53098 78 243 2.28E-37 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE2625 825a5535bb0cf71d163d624d9b99eed6 249 Pfam PF00665 Integrase core domain 88 199 3.5E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YE3044 825a5535bb0cf71d163d624d9b99eed6 249 Gene3D G3DSA:3.30.420.10 79 238 1.5E-30 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE3044 825a5535bb0cf71d163d624d9b99eed6 249 PANTHER PTHR32552 16 247 1.0E-55 T 22-04-2016 YE3044 825a5535bb0cf71d163d624d9b99eed6 249 Pfam PF13276 HTH-like domain 11 61 1.5E-10 T 22-04-2016 IPR025948 HTH-like domain YE3044 825a5535bb0cf71d163d624d9b99eed6 249 SUPERFAMILY SSF53098 78 243 2.28E-37 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE3044 825a5535bb0cf71d163d624d9b99eed6 249 Pfam PF00665 Integrase core domain 88 199 3.5E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YE1803 825a5535bb0cf71d163d624d9b99eed6 249 Gene3D G3DSA:3.30.420.10 79 238 1.5E-30 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE1803 825a5535bb0cf71d163d624d9b99eed6 249 PANTHER PTHR32552 16 247 1.0E-55 T 22-04-2016 YE1803 825a5535bb0cf71d163d624d9b99eed6 249 Pfam PF13276 HTH-like domain 11 61 1.5E-10 T 22-04-2016 IPR025948 HTH-like domain YE1803 825a5535bb0cf71d163d624d9b99eed6 249 SUPERFAMILY SSF53098 78 243 2.28E-37 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE1803 825a5535bb0cf71d163d624d9b99eed6 249 Pfam PF00665 Integrase core domain 88 199 3.5E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YE1423 86911f84e7058bd9c06438958bfc01e3 585 Gene3D G3DSA:3.40.50.300 3 155 3.9E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1423 86911f84e7058bd9c06438958bfc01e3 585 PANTHER PTHR24031:SF319 233 367 6.8E-220 T 22-04-2016 YE1423 86911f84e7058bd9c06438958bfc01e3 585 PANTHER PTHR24031:SF319 1 153 6.8E-220 T 22-04-2016 YE1423 86911f84e7058bd9c06438958bfc01e3 585 PANTHER PTHR24031:SF319 443 584 6.8E-220 T 22-04-2016 YE1423 86911f84e7058bd9c06438958bfc01e3 585 PANTHER PTHR24031:SF319 172 208 6.8E-220 T 22-04-2016 YE1423 86911f84e7058bd9c06438958bfc01e3 585 PANTHER PTHR24031 233 367 6.8E-220 T 22-04-2016 YE1423 86911f84e7058bd9c06438958bfc01e3 585 PANTHER PTHR24031 1 153 6.8E-220 T 22-04-2016 YE1423 86911f84e7058bd9c06438958bfc01e3 585 PANTHER PTHR24031 443 584 6.8E-220 T 22-04-2016 YE1423 86911f84e7058bd9c06438958bfc01e3 585 PANTHER PTHR24031 172 208 6.8E-220 T 22-04-2016 YE1423 86911f84e7058bd9c06438958bfc01e3 585 Pfam PF00271 Helicase conserved C-terminal domain 243 344 1.8E-11 T 22-04-2016 IPR001650 Helicase, C-terminal YE1423 86911f84e7058bd9c06438958bfc01e3 585 SMART SM00487 1 185 5.2E-18 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain YE1423 86911f84e7058bd9c06438958bfc01e3 585 SUPERFAMILY SSF57829 424 467 2.01E-7 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 YE1423 86911f84e7058bd9c06438958bfc01e3 585 SMART SM00490 263 345 2.9E-9 T 22-04-2016 IPR001650 Helicase, C-terminal YE1423 86911f84e7058bd9c06438958bfc01e3 585 Gene3D G3DSA:3.40.50.300 238 355 7.5E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1423 86911f84e7058bd9c06438958bfc01e3 585 SUPERFAMILY SSF52540 237 359 2.18E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1423 86911f84e7058bd9c06438958bfc01e3 585 SUPERFAMILY SSF52540 50 189 2.18E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1423 86911f84e7058bd9c06438958bfc01e3 585 Pfam PF04851 Type III restriction enzyme, res subunit 3 155 3.2E-25 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 YE2278 af893b8186ff6fa0cd6df227c4a7ddb5 864 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 25 141 4.7E-18 T 22-04-2016 IPR000014 PAS domain YE2278 af893b8186ff6fa0cd6df227c4a7ddb5 864 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 148 268 2.9E-10 T 22-04-2016 IPR000014 PAS domain YE2278 af893b8186ff6fa0cd6df227c4a7ddb5 864 Pfam PF13426 PAS domain 159 262 2.3E-8 T 22-04-2016 IPR000014 PAS domain YE2278 af893b8186ff6fa0cd6df227c4a7ddb5 864 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 433 594 1.8E-39 T 22-04-2016 IPR000160 GGDEF domain YE2278 af893b8186ff6fa0cd6df227c4a7ddb5 864 Pfam PF00990 Diguanylate cyclase, GGDEF domain 437 592 6.6E-46 T 22-04-2016 IPR000160 GGDEF domain YE2278 af893b8186ff6fa0cd6df227c4a7ddb5 864 SMART SM00065 266 434 3.7E-9 T 22-04-2016 IPR003018 GAF domain GO:0005515 YE2278 af893b8186ff6fa0cd6df227c4a7ddb5 864 Gene3D G3DSA:3.30.450.40 272 436 5.5E-14 T 22-04-2016 IPR029016 GAF domain-like YE2278 af893b8186ff6fa0cd6df227c4a7ddb5 864 Gene3D G3DSA:3.20.20.450 611 860 8.6E-88 T 22-04-2016 IPR001633 EAL domain YE2278 af893b8186ff6fa0cd6df227c4a7ddb5 864 Pfam PF00563 EAL domain 613 847 1.6E-67 T 22-04-2016 IPR001633 EAL domain YE2278 af893b8186ff6fa0cd6df227c4a7ddb5 864 SMART SM00091 147 219 0.019 T 22-04-2016 IPR000014 PAS domain YE2278 af893b8186ff6fa0cd6df227c4a7ddb5 864 SMART SM00091 18 88 2.1E-4 T 22-04-2016 IPR000014 PAS domain YE2278 af893b8186ff6fa0cd6df227c4a7ddb5 864 PIRSF PIRSF005925 136 864 1.7E-249 T 22-04-2016 YE2278 af893b8186ff6fa0cd6df227c4a7ddb5 864 SUPERFAMILY SSF55073 442 598 3.45E-47 T 22-04-2016 IPR029787 Nucleotide cyclase YE2278 af893b8186ff6fa0cd6df227c4a7ddb5 864 SUPERFAMILY SSF141868 612 860 2.09E-79 T 22-04-2016 IPR001633 EAL domain YE2278 af893b8186ff6fa0cd6df227c4a7ddb5 864 SMART SM00052 607 853 2.1E-101 T 22-04-2016 IPR001633 EAL domain YE2278 af893b8186ff6fa0cd6df227c4a7ddb5 864 Pfam PF13185 GAF domain 282 425 3.7E-12 T 22-04-2016 IPR003018 GAF domain GO:0005515 YE2278 af893b8186ff6fa0cd6df227c4a7ddb5 864 PANTHER PTHR33121:SF13 548 860 1.3E-78 T 22-04-2016 YE2278 af893b8186ff6fa0cd6df227c4a7ddb5 864 Pfam PF08447 PAS fold 42 129 6.5E-14 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 YE2278 af893b8186ff6fa0cd6df227c4a7ddb5 864 PANTHER PTHR33121 548 860 1.3E-78 T 22-04-2016 YE2278 af893b8186ff6fa0cd6df227c4a7ddb5 864 Gene3D G3DSA:3.30.450.20 32 133 4.6E-22 T 22-04-2016 YE2278 af893b8186ff6fa0cd6df227c4a7ddb5 864 Gene3D G3DSA:3.30.450.20 159 262 6.2E-13 T 22-04-2016 YE2278 af893b8186ff6fa0cd6df227c4a7ddb5 864 Gene3D G3DSA:3.30.70.270 439 603 1.6E-50 T 22-04-2016 YE2278 af893b8186ff6fa0cd6df227c4a7ddb5 864 SUPERFAMILY SSF55785 171 262 7.93E-13 T 22-04-2016 IPR000014 PAS domain YE2278 af893b8186ff6fa0cd6df227c4a7ddb5 864 SUPERFAMILY SSF55785 30 132 2.84E-23 T 22-04-2016 IPR000014 PAS domain YE2278 af893b8186ff6fa0cd6df227c4a7ddb5 864 SUPERFAMILY SSF55781 284 437 2.62E-21 T 22-04-2016 IPR029016 GAF domain-like YE2278 af893b8186ff6fa0cd6df227c4a7ddb5 864 SMART SM00267 426 597 4.2E-57 T 22-04-2016 IPR000160 GGDEF domain YE2278 af893b8186ff6fa0cd6df227c4a7ddb5 864 SMART SM00086 93 135 0.15 T 22-04-2016 IPR001610 PAC motif YE2278 af893b8186ff6fa0cd6df227c4a7ddb5 864 SMART SM00086 223 264 99.0 T 22-04-2016 IPR001610 PAC motif YE1114 5602ced7e94d69c4c980e1574c75908e 175 PANTHER PTHR33420 9 175 1.4E-21 T 22-04-2016 YE1114 5602ced7e94d69c4c980e1574c75908e 175 Gene3D G3DSA:2.60.40.1090 27 175 1.3E-23 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YE1114 5602ced7e94d69c4c980e1574c75908e 175 SUPERFAMILY SSF49401 29 175 4.37E-22 T 22-04-2016 IPR008966 Adhesion domain YE1114 5602ced7e94d69c4c980e1574c75908e 175 Pfam PF00419 Fimbrial protein 31 174 1.7E-8 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YE2228 b00fca2e39cb0d9005117bfe0f136e0b 107 Gene3D G3DSA:3.10.450.140 7 107 1.6E-50 T 22-04-2016 IPR007376 dsDNA mimic, putative YE2228 b00fca2e39cb0d9005117bfe0f136e0b 107 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 5 107 2.0E-53 T 22-04-2016 IPR007376 dsDNA mimic, putative YE2228 b00fca2e39cb0d9005117bfe0f136e0b 107 SUPERFAMILY SSF102816 1 107 3.92E-52 T 22-04-2016 IPR007376 dsDNA mimic, putative YE2228 b00fca2e39cb0d9005117bfe0f136e0b 107 PIRSF PIRSF004916 1 107 1.7E-56 T 22-04-2016 IPR007376 dsDNA mimic, putative YE2228 b00fca2e39cb0d9005117bfe0f136e0b 107 Hamap MF_00680 UPF0263 protein YciU [yciU]. 3 107 34.961 T 22-04-2016 IPR007376 dsDNA mimic, putative YE2228 b00fca2e39cb0d9005117bfe0f136e0b 107 Pfam PF04269 Protein of unknown function, DUF440 6 107 6.0E-47 T 22-04-2016 IPR007376 dsDNA mimic, putative YE1543 98fbdded22b5268d5e0d988cdbce6df3 582 PANTHER PTHR24221 1 582 0.0 T 22-04-2016 YE1543 98fbdded22b5268d5e0d988cdbce6df3 582 SUPERFAMILY SSF52540 332 580 2.07E-95 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1543 98fbdded22b5268d5e0d988cdbce6df3 582 Gene3D G3DSA:1.20.1560.10 13 327 1.2E-71 T 22-04-2016 YE1543 98fbdded22b5268d5e0d988cdbce6df3 582 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 12 581 2.1E-264 T 22-04-2016 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 YE1543 98fbdded22b5268d5e0d988cdbce6df3 582 SUPERFAMILY SSF90123 14 327 2.49E-75 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YE1543 98fbdded22b5268d5e0d988cdbce6df3 582 Pfam PF00664 ABC transporter transmembrane region 28 297 9.9E-60 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YE1543 98fbdded22b5268d5e0d988cdbce6df3 582 Pfam PF00005 ABC transporter 359 509 2.9E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE1543 98fbdded22b5268d5e0d988cdbce6df3 582 Gene3D G3DSA:3.40.50.300 341 574 3.7E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1543 98fbdded22b5268d5e0d988cdbce6df3 582 SMART SM00382 368 555 4.6E-19 T 22-04-2016 IPR003593 AAA+ ATPase domain YE1543 98fbdded22b5268d5e0d988cdbce6df3 582 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE1543 98fbdded22b5268d5e0d988cdbce6df3 582 PANTHER PTHR24221:SF188 1 582 0.0 T 22-04-2016 YE1465 f1af8011ff20a1c175f06fa9dcbd7fff 336 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 1 121 2.5E-36 T 22-04-2016 IPR026992 Non-haem dioxygenase N-terminal domain YE1465 f1af8011ff20a1c175f06fa9dcbd7fff 336 PRINTS PR00682 Isopenicillin N synthase signature 20 37 1.9E-11 T 22-04-2016 IPR002283 Isopenicillin N synthase GO:0005506|GO:0016491|GO:0055114 YE1465 f1af8011ff20a1c175f06fa9dcbd7fff 336 PRINTS PR00682 Isopenicillin N synthase signature 227 253 1.9E-11 T 22-04-2016 IPR002283 Isopenicillin N synthase GO:0005506|GO:0016491|GO:0055114 YE1465 f1af8011ff20a1c175f06fa9dcbd7fff 336 PRINTS PR00682 Isopenicillin N synthase signature 191 212 1.9E-11 T 22-04-2016 IPR002283 Isopenicillin N synthase GO:0005506|GO:0016491|GO:0055114 YE1465 f1af8011ff20a1c175f06fa9dcbd7fff 336 SUPERFAMILY SSF51197 2 278 2.13E-82 T 22-04-2016 YE1465 f1af8011ff20a1c175f06fa9dcbd7fff 336 Gene3D G3DSA:2.60.120.330 2 279 4.8E-89 T 22-04-2016 IPR027443 Isopenicillin N synthase-like YE1465 f1af8011ff20a1c175f06fa9dcbd7fff 336 PANTHER PTHR10209:SF146 1 320 2.0E-106 T 22-04-2016 YE1465 f1af8011ff20a1c175f06fa9dcbd7fff 336 PANTHER PTHR10209 1 320 2.0E-106 T 22-04-2016 YE1465 f1af8011ff20a1c175f06fa9dcbd7fff 336 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 170 266 6.8E-18 T 22-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 YE0793 74156451d4b911e5bcac1f069b20676f 658 Pfam PF00005 ABC transporter 36 184 1.6E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE0793 74156451d4b911e5bcac1f069b20676f 658 PANTHER PTHR24220 18 404 1.4E-98 T 22-04-2016 YE0793 74156451d4b911e5bcac1f069b20676f 658 SMART SM00382 45 232 1.1E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain YE0793 74156451d4b911e5bcac1f069b20676f 658 Gene3D G3DSA:3.40.50.300 13 243 4.1E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0793 74156451d4b911e5bcac1f069b20676f 658 SUPERFAMILY SSF52540 16 242 1.14E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0793 74156451d4b911e5bcac1f069b20676f 658 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE0793 74156451d4b911e5bcac1f069b20676f 658 Pfam PF12704 MacB-like periplasmic core domain 285 501 8.4E-34 T 22-04-2016 IPR025857 MacB-like periplasmic core domain YE0793 74156451d4b911e5bcac1f069b20676f 658 PANTHER PTHR24220:SF578 18 404 1.4E-98 T 22-04-2016 YE0793 74156451d4b911e5bcac1f069b20676f 658 Pfam PF02687 FtsX-like permease family 538 651 8.7E-19 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 YE1711 93960457988ec9f48fbe7041e87342d8 234 PANTHER PTHR24220:SF111 8 231 2.1E-129 T 22-04-2016 YE1711 93960457988ec9f48fbe7041e87342d8 234 Gene3D G3DSA:3.40.50.300 5 227 1.1E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1711 93960457988ec9f48fbe7041e87342d8 234 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 6 225 2.7E-109 T 22-04-2016 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0006810|GO:0016020 YE1711 93960457988ec9f48fbe7041e87342d8 234 Pfam PF00005 ABC transporter 26 174 4.7E-36 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE1711 93960457988ec9f48fbe7041e87342d8 234 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE1711 93960457988ec9f48fbe7041e87342d8 234 SUPERFAMILY SSF52540 6 227 2.28E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1711 93960457988ec9f48fbe7041e87342d8 234 SMART SM00382 35 223 3.8E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain YE1711 93960457988ec9f48fbe7041e87342d8 234 PANTHER PTHR24220 8 231 2.1E-129 T 22-04-2016 YE0224 b874476f966644cb47a242d5f804ccbb 227 PANTHER PTHR18895 29 210 5.0E-54 T 22-04-2016 YE0224 b874476f966644cb47a242d5f804ccbb 227 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 142 148 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 YE0224 b874476f966644cb47a242d5f804ccbb 227 Gene3D G3DSA:3.40.50.150 22 209 3.8E-68 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE0224 b874476f966644cb47a242d5f804ccbb 227 SUPERFAMILY SSF53335 29 207 2.98E-53 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE0224 b874476f966644cb47a242d5f804ccbb 227 PANTHER PTHR18895:SF60 29 210 5.0E-54 T 22-04-2016 YE0224 b874476f966644cb47a242d5f804ccbb 227 Pfam PF03602 Conserved hypothetical protein 95 30 205 1.2E-60 T 22-04-2016 YE0224 b874476f966644cb47a242d5f804ccbb 227 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 25 207 3.2E-62 T 22-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YE1696 c8aa55c635e4e5dee1abca887ab6ec45 514 SMART SM00382 317 502 8.6E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain YE1696 c8aa55c635e4e5dee1abca887ab6ec45 514 Pfam PF00664 ABC transporter transmembrane region 40 239 4.3E-25 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YE1696 c8aa55c635e4e5dee1abca887ab6ec45 514 SUPERFAMILY SSF90123 433 442 2.09E-37 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YE1696 c8aa55c635e4e5dee1abca887ab6ec45 514 SUPERFAMILY SSF90123 35 254 2.09E-37 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YE1696 c8aa55c635e4e5dee1abca887ab6ec45 514 Gene3D G3DSA:3.40.50.300 290 508 7.5E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1696 c8aa55c635e4e5dee1abca887ab6ec45 514 Pfam PF00005 ABC transporter 309 457 2.8E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE1696 c8aa55c635e4e5dee1abca887ab6ec45 514 SUPERFAMILY SSF52540 282 501 4.07E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1696 c8aa55c635e4e5dee1abca887ab6ec45 514 Gene3D G3DSA:1.20.1560.10 37 265 1.7E-36 T 22-04-2016 YE1696 c8aa55c635e4e5dee1abca887ab6ec45 514 ProSitePatterns PS00211 ABC transporters family signature. 429 443 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE1696 c8aa55c635e4e5dee1abca887ab6ec45 514 PANTHER PTHR24221:SF138 51 495 1.5E-107 T 22-04-2016 YE1696 c8aa55c635e4e5dee1abca887ab6ec45 514 PANTHER PTHR24221 51 495 1.5E-107 T 22-04-2016 YE1599 6320ebd98d7979e23851ac8f1a5d6ba0 244 Gene3D G3DSA:3.30.450.80 2 183 8.1E-42 T 22-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain YE1599 6320ebd98d7979e23851ac8f1a5d6ba0 244 SUPERFAMILY SSF75516 2 162 6.15E-37 T 22-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain YE1599 6320ebd98d7979e23851ac8f1a5d6ba0 244 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 195 1.6E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE1599 6320ebd98d7979e23851ac8f1a5d6ba0 244 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 195 211 1.6E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE1599 6320ebd98d7979e23851ac8f1a5d6ba0 244 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 211 223 1.6E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE1599 6320ebd98d7979e23851ac8f1a5d6ba0 244 SMART SM00421 178 235 8.7E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE1599 6320ebd98d7979e23851ac8f1a5d6ba0 244 Pfam PF00196 Bacterial regulatory proteins, luxR family 180 234 1.4E-14 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE1599 6320ebd98d7979e23851ac8f1a5d6ba0 244 Gene3D G3DSA:1.10.10.10 184 241 7.9E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1599 6320ebd98d7979e23851ac8f1a5d6ba0 244 ProSitePatterns PS00622 LuxR-type HTH domain signature. 195 222 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE1599 6320ebd98d7979e23851ac8f1a5d6ba0 244 SUPERFAMILY SSF46894 178 241 7.48E-15 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YE1599 6320ebd98d7979e23851ac8f1a5d6ba0 244 Pfam PF03472 Autoinducer binding domain 13 157 8.8E-30 T 22-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain YE2418 7f7a696941dc79833192c732ec7b8854 401 PANTHER PTHR23517 1 401 2.2E-197 T 22-04-2016 YE2418 7f7a696941dc79833192c732ec7b8854 401 Hamap MF_01529 Multidrug resistance protein MdtH [mdtH]. 1 401 40.671 T 22-04-2016 IPR022855 Multidrug resistance protein MdtH YE2418 7f7a696941dc79833192c732ec7b8854 401 PANTHER PTHR23517:SF2 1 401 2.2E-197 T 22-04-2016 YE2418 7f7a696941dc79833192c732ec7b8854 401 SUPERFAMILY SSF103473 14 392 8.76E-54 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE2418 7f7a696941dc79833192c732ec7b8854 401 Pfam PF07690 Major Facilitator Superfamily 20 237 1.9E-23 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YE2418 7f7a696941dc79833192c732ec7b8854 401 Gene3D G3DSA:1.20.1250.20 18 187 2.6E-26 T 22-04-2016 YE2418 7f7a696941dc79833192c732ec7b8854 401 Gene3D G3DSA:1.20.1250.20 199 387 1.2E-18 T 22-04-2016 YE3878 5cb5bfd5fdb735b720b34eb56e05b77c 99 SUPERFAMILY SSF46689 2 92 1.09E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE3878 5cb5bfd5fdb735b720b34eb56e05b77c 99 Gene3D G3DSA:1.10.10.60 6 89 7.5E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE3878 5cb5bfd5fdb735b720b34eb56e05b77c 99 PANTHER PTHR33215:SF4 2 99 3.0E-49 T 22-04-2016 YE3878 5cb5bfd5fdb735b720b34eb56e05b77c 99 Pfam PF01527 Transposase 4 73 1.4E-12 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 YE3878 5cb5bfd5fdb735b720b34eb56e05b77c 99 PANTHER PTHR33215 2 99 3.0E-49 T 22-04-2016 YE3515 de2cefb68c16083e46cbba58b608bd2c 293 PANTHER PTHR13696 1 193 3.6E-17 T 22-04-2016 YE3515 de2cefb68c16083e46cbba58b608bd2c 293 Pfam PF13614 AAA domain 1 147 4.9E-19 T 22-04-2016 IPR025669 AAA domain YE3515 de2cefb68c16083e46cbba58b608bd2c 293 Gene3D G3DSA:3.40.50.300 1 279 9.8E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3515 de2cefb68c16083e46cbba58b608bd2c 293 SUPERFAMILY SSF52540 1 276 1.82E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3618 8d484660573b3d57dc292cd8d4a5649e 283 PANTHER PTHR30532 1 282 9.9E-136 T 22-04-2016 YE3618 8d484660573b3d57dc292cd8d4a5649e 283 Pfam PF01497 Periplasmic binding protein 10 256 6.7E-28 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 YE3618 8d484660573b3d57dc292cd8d4a5649e 283 Gene3D G3DSA:3.40.50.1980 1 118 3.0E-22 T 22-04-2016 YE3618 8d484660573b3d57dc292cd8d4a5649e 283 PANTHER PTHR30532:SF2 1 282 9.9E-136 T 22-04-2016 YE3618 8d484660573b3d57dc292cd8d4a5649e 283 SUPERFAMILY SSF53807 1 274 1.33E-44 T 22-04-2016 YE3618 8d484660573b3d57dc292cd8d4a5649e 283 Gene3D G3DSA:3.40.50.1980 119 280 8.3E-29 T 22-04-2016 YE3599 0cdc291a416f43b8753f121c843eab5d 260 TIGRFAM TIGR00694 thiM: hydroxyethylthiazole kinase 14 256 1.9E-84 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 YE3599 0cdc291a416f43b8753f121c843eab5d 260 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 16 259 29.547 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 YE3599 0cdc291a416f43b8753f121c843eab5d 260 Gene3D G3DSA:3.40.1190.20 8 256 9.9E-82 T 22-04-2016 IPR029056 Ribokinase-like YE3599 0cdc291a416f43b8753f121c843eab5d 260 PANTHER PTHR20857 13 256 5.3E-75 T 22-04-2016 YE3599 0cdc291a416f43b8753f121c843eab5d 260 PIRSF PIRSF000513 9 260 3.0E-91 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 YE3599 0cdc291a416f43b8753f121c843eab5d 260 PANTHER PTHR20857:SF19 13 256 5.3E-75 T 22-04-2016 YE3599 0cdc291a416f43b8753f121c843eab5d 260 SUPERFAMILY SSF53613 10 255 1.96E-57 T 22-04-2016 IPR029056 Ribokinase-like YE3599 0cdc291a416f43b8753f121c843eab5d 260 Pfam PF02110 Hydroxyethylthiazole kinase family 14 256 1.8E-88 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 YE3599 0cdc291a416f43b8753f121c843eab5d 260 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 166 183 9.2E-40 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 YE3599 0cdc291a416f43b8753f121c843eab5d 260 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 66 74 9.2E-40 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 YE3599 0cdc291a416f43b8753f121c843eab5d 260 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 35 56 9.2E-40 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 YE3599 0cdc291a416f43b8753f121c843eab5d 260 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 92 109 9.2E-40 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 YE3599 0cdc291a416f43b8753f121c843eab5d 260 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 22 29 9.2E-40 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 YE3599 0cdc291a416f43b8753f121c843eab5d 260 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 122 136 9.2E-40 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 YE2772 0d6c11cf0a4fe510209907269b40eea6 204 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 33 105 4.3E-31 T 22-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 YE2772 0d6c11cf0a4fe510209907269b40eea6 204 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 56 105 4.0E-25 T 22-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 YE2772 0d6c11cf0a4fe510209907269b40eea6 204 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 112 198 18.432 T 22-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 YE2772 0d6c11cf0a4fe510209907269b40eea6 204 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 116 201 2.1E-16 T 22-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 YE2772 0d6c11cf0a4fe510209907269b40eea6 204 PANTHER PTHR21256:SF16 1 204 1.3E-119 T 22-04-2016 YE2772 0d6c11cf0a4fe510209907269b40eea6 204 PANTHER PTHR21256 1 204 1.3E-119 T 22-04-2016 YE2772 0d6c11cf0a4fe510209907269b40eea6 204 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 115 197 4.7E-30 T 22-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 YE2772 0d6c11cf0a4fe510209907269b40eea6 204 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 8 203 38.041 T 22-04-2016 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19|UniPathway: UPA00031|UniPathway: UPA00031 YE2772 0d6c11cf0a4fe510209907269b40eea6 204 SUPERFAMILY SSF101386 114 203 1.81E-23 T 22-04-2016 YE2772 0d6c11cf0a4fe510209907269b40eea6 204 SUPERFAMILY SSF141734 5 122 5.62E-47 T 22-04-2016 YE4148 4ce98a1befd3c7270789cb2789c3c3ae 640 Gene3D G3DSA:3.40.930.10 500 637 1.9E-44 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YE4148 4ce98a1befd3c7270789cb2789c3c3ae 640 SUPERFAMILY SSF52794 380 470 6.8E-22 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 YE4148 4ce98a1befd3c7270789cb2789c3c3ae 640 PANTHER PTHR30181:SF2 1 613 0.0 T 22-04-2016 YE4148 4ce98a1befd3c7270789cb2789c3c3ae 640 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 542 558 - T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YE4148 4ce98a1befd3c7270789cb2789c3c3ae 640 Pfam PF02378 Phosphotransferase system, EIIC 18 278 3.1E-19 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 YE4148 4ce98a1befd3c7270789cb2789c3c3ae 640 PANTHER PTHR30181 1 613 0.0 T 22-04-2016 YE4148 4ce98a1befd3c7270789cb2789c3c3ae 640 Gene3D G3DSA:3.40.50.10370 379 474 1.4E-41 T 22-04-2016 IPR029503 Phosphotransferase system EIIB component, mannitol-specific GO:0009401|GO:0022872 YE4148 4ce98a1befd3c7270789cb2789c3c3ae 640 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 501 636 3.0E-34 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YE4148 4ce98a1befd3c7270789cb2789c3c3ae 640 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 382 457 3.1E-9 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 YE4148 4ce98a1befd3c7270789cb2789c3c3ae 640 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 9 344 5.9E-183 T 22-04-2016 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 YE4148 4ce98a1befd3c7270789cb2789c3c3ae 640 SUPERFAMILY SSF55804 499 637 1.83E-41 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 YE0897 e1f7b60644afc983165f6a21abfafb2e 275 Pfam PF01553 Acyltransferase 90 199 6.9E-11 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 YE0897 e1f7b60644afc983165f6a21abfafb2e 275 SMART SM00563 103 211 6.8E-14 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 YE0897 e1f7b60644afc983165f6a21abfafb2e 275 PANTHER PTHR10434:SF11 20 208 2.2E-14 T 22-04-2016 YE0897 e1f7b60644afc983165f6a21abfafb2e 275 PANTHER PTHR10434 20 208 2.2E-14 T 22-04-2016 YE0897 e1f7b60644afc983165f6a21abfafb2e 275 SUPERFAMILY SSF69593 67 248 2.22E-21 T 22-04-2016 YE0897 e1f7b60644afc983165f6a21abfafb2e 275 Gene3D G3DSA:3.40.1130.10 94 185 1.8E-4 T 22-04-2016 YE0312 dacba59eef30c5f8855f3a739912dbed 206 Gene3D G3DSA:1.10.10.60 157 202 3.8E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE0312 dacba59eef30c5f8855f3a739912dbed 206 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 186 202 2.8E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YE0312 dacba59eef30c5f8855f3a739912dbed 206 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 171 186 2.8E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YE0312 dacba59eef30c5f8855f3a739912dbed 206 PANTHER PTHR11019:SF60 104 202 3.5E-27 T 22-04-2016 YE0312 dacba59eef30c5f8855f3a739912dbed 206 Pfam PF12833 Helix-turn-helix domain 125 202 1.4E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YE0312 dacba59eef30c5f8855f3a739912dbed 206 Gene3D G3DSA:1.10.10.60 107 156 1.7E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE0312 dacba59eef30c5f8855f3a739912dbed 206 PANTHER PTHR11019 104 202 3.5E-27 T 22-04-2016 YE0312 dacba59eef30c5f8855f3a739912dbed 206 SMART SM00342 119 202 7.8E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YE0312 dacba59eef30c5f8855f3a739912dbed 206 SUPERFAMILY SSF46689 156 203 2.69E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE2686 ed6136d1691fe3ef8723f94c1eed9235 458 Gene3D G3DSA:3.30.1330.60 330 456 4.8E-30 T 22-04-2016 IPR006665 OmpA-like domain YE2686 ed6136d1691fe3ef8723f94c1eed9235 458 PANTHER PTHR30128:SF2 86 457 8.4E-60 T 22-04-2016 YE2686 ed6136d1691fe3ef8723f94c1eed9235 458 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 86 293 1.4E-59 T 22-04-2016 IPR017732 Type IV / VI secretion system, DotU YE2686 ed6136d1691fe3ef8723f94c1eed9235 458 Pfam PF09850 Type VI secretion system protein DotU 86 289 6.3E-48 T 22-04-2016 IPR017732 Type IV / VI secretion system, DotU YE2686 ed6136d1691fe3ef8723f94c1eed9235 458 TIGRFAM TIGR03350 type_VI_ompA: type VI secretion system peptidoglycan-associated domain 320 456 2.6E-50 T 22-04-2016 IPR017733 Type VI secretion system peptidoglycan-associated domain YE2686 ed6136d1691fe3ef8723f94c1eed9235 458 PANTHER PTHR30128 86 457 8.4E-60 T 22-04-2016 YE2686 ed6136d1691fe3ef8723f94c1eed9235 458 Pfam PF00691 OmpA family 352 450 1.1E-18 T 22-04-2016 IPR006665 OmpA-like domain YE2686 ed6136d1691fe3ef8723f94c1eed9235 458 SUPERFAMILY SSF103088 344 456 8.37E-29 T 22-04-2016 IPR006665 OmpA-like domain YE2686 ed6136d1691fe3ef8723f94c1eed9235 458 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 439 458 3.6E-7 T 22-04-2016 YE2686 ed6136d1691fe3ef8723f94c1eed9235 458 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 419 438 3.6E-7 T 22-04-2016 YE2686 ed6136d1691fe3ef8723f94c1eed9235 458 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 401 418 3.6E-7 T 22-04-2016 YE0414a 876b40476dc6f326e8afbbdc29c9ee0c 91 SUPERFAMILY SSF47413 4 72 1.27E-28 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE0414a 876b40476dc6f326e8afbbdc29c9ee0c 91 Gene3D G3DSA:1.10.260.40 2 72 9.7E-40 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE0414a 876b40476dc6f326e8afbbdc29c9ee0c 91 Pfam PF13693 Winged helix-turn-helix DNA-binding 7 81 1.6E-37 T 22-04-2016 YE0623 60471b9741519c56af923d533896b097 204 Pfam PF01810 LysE type translocator 15 203 1.2E-37 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 YE0623 60471b9741519c56af923d533896b097 204 PANTHER PTHR30086 1 204 3.1E-144 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 YE0623 60471b9741519c56af923d533896b097 204 PIRSF PIRSF006324 1 204 1.4E-57 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 YE0623 60471b9741519c56af923d533896b097 204 PANTHER PTHR30086:SF8 1 204 3.1E-144 T 22-04-2016 YE3986 3989ecc82ae7a2c4c713fe7e2f2dcb55 539 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 7 539 9.0E-286 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 YE3986 3989ecc82ae7a2c4c713fe7e2f2dcb55 539 PANTHER PTHR30031 7 539 0.0 T 22-04-2016 YE3986 3989ecc82ae7a2c4c713fe7e2f2dcb55 539 Gene3D G3DSA:3.40.449.10 21 226 1.3E-88 T 22-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 YE3986 3989ecc82ae7a2c4c713fe7e2f2dcb55 539 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 264 279 - T 22-04-2016 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 YE3986 3989ecc82ae7a2c4c713fe7e2f2dcb55 539 PANTHER PTHR30031:SF0 7 539 0.0 T 22-04-2016 YE3986 3989ecc82ae7a2c4c713fe7e2f2dcb55 539 PIRSF PIRSF006294 3 539 3.4E-230 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 YE3986 3989ecc82ae7a2c4c713fe7e2f2dcb55 539 Hamap MF_00453 Phosphoenolpyruvate carboxykinase [ATP] [pckA]. 15 537 55.255 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 YE3986 3989ecc82ae7a2c4c713fe7e2f2dcb55 539 Pfam PF01293 Phosphoenolpyruvate carboxykinase 21 489 6.8E-211 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 YE3986 3989ecc82ae7a2c4c713fe7e2f2dcb55 539 SUPERFAMILY SSF68923 8 226 8.89E-92 T 22-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 YE3986 3989ecc82ae7a2c4c713fe7e2f2dcb55 539 Gene3D G3DSA:3.90.228.20 227 289 4.0E-120 T 22-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 YE3986 3989ecc82ae7a2c4c713fe7e2f2dcb55 539 Gene3D G3DSA:3.90.228.20 350 538 4.0E-120 T 22-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 YE3986 3989ecc82ae7a2c4c713fe7e2f2dcb55 539 SUPERFAMILY SSF53795 228 539 1.97E-128 T 22-04-2016 YE1068 7d91a19b96d4da7d8fb50da7b6025840 841 SMART SM00247 111 206 0.0042 T 22-04-2016 IPR001064 Beta/gamma crystallin YE1068 7d91a19b96d4da7d8fb50da7b6025840 841 SMART SM00247 25 109 0.0011 T 22-04-2016 IPR001064 Beta/gamma crystallin YE1068 7d91a19b96d4da7d8fb50da7b6025840 841 Gene3D G3DSA:2.60.120.200 366 405 7.3E-4 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain YE1068 7d91a19b96d4da7d8fb50da7b6025840 841 SUPERFAMILY SSF55729 735 840 2.36E-5 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE1068 7d91a19b96d4da7d8fb50da7b6025840 841 Pfam PF03995 Peptidase inhibitor family I36 112 181 2.7E-5 T 22-04-2016 YE1068 7d91a19b96d4da7d8fb50da7b6025840 841 Gene3D G3DSA:2.60.20.10 111 209 2.3E-25 T 22-04-2016 YE1068 7d91a19b96d4da7d8fb50da7b6025840 841 Gene3D G3DSA:2.60.20.10 17 110 1.7E-23 T 22-04-2016 YE1068 7d91a19b96d4da7d8fb50da7b6025840 841 Gene3D G3DSA:3.40.630.30 737 840 3.4E-4 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE1068 7d91a19b96d4da7d8fb50da7b6025840 841 SUPERFAMILY SSF49695 16 107 3.93E-15 T 22-04-2016 IPR011024 Gamma-crystallin-related YE1068 7d91a19b96d4da7d8fb50da7b6025840 841 Pfam PF00030 Beta/Gamma crystallin 25 107 6.8E-7 T 22-04-2016 IPR001064 Beta/gamma crystallin YE1068 7d91a19b96d4da7d8fb50da7b6025840 841 SUPERFAMILY SSF49695 110 204 6.83E-16 T 22-04-2016 IPR011024 Gamma-crystallin-related YE1068 7d91a19b96d4da7d8fb50da7b6025840 841 Pfam PF09101 Exotoxin A binding 362 407 7.2E-5 T 22-04-2016 IPR015185 Exotoxin A, binding YE2663 d6ba0b99c172f67de1e99315d538dc63 1274 SMART SM00388 738 802 3.1E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE2663 d6ba0b99c172f67de1e99315d538dc63 1274 Gene3D G3DSA:3.30.450.20 610 743 2.7E-4 T 22-04-2016 YE2663 d6ba0b99c172f67de1e99315d538dc63 1274 PANTHER PTHR24423 603 1145 5.3E-132 T 22-04-2016 YE2663 d6ba0b99c172f67de1e99315d538dc63 1274 SUPERFAMILY SSF53850 320 550 2.15E-38 T 22-04-2016 YE2663 d6ba0b99c172f67de1e99315d538dc63 1274 PANTHER PTHR24423:SF382 603 1145 5.3E-132 T 22-04-2016 YE2663 d6ba0b99c172f67de1e99315d538dc63 1274 Pfam PF01627 Hpt domain 1164 1236 1.4E-5 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YE2663 d6ba0b99c172f67de1e99315d538dc63 1274 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 90 302 4.7E-14 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YE2663 d6ba0b99c172f67de1e99315d538dc63 1274 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 336 548 2.0E-28 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YE2663 d6ba0b99c172f67de1e99315d538dc63 1274 PRINTS PR00344 Bacterial sensor protein C-terminal signature 949 962 6.0E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE2663 d6ba0b99c172f67de1e99315d538dc63 1274 PRINTS PR00344 Bacterial sensor protein C-terminal signature 925 943 6.0E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE2663 d6ba0b99c172f67de1e99315d538dc63 1274 PRINTS PR00344 Bacterial sensor protein C-terminal signature 908 918 6.0E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE2663 d6ba0b99c172f67de1e99315d538dc63 1274 PRINTS PR00344 Bacterial sensor protein C-terminal signature 890 904 6.0E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE2663 d6ba0b99c172f67de1e99315d538dc63 1274 Gene3D G3DSA:3.40.190.10 328 432 3.9E-11 T 22-04-2016 YE2663 d6ba0b99c172f67de1e99315d538dc63 1274 SMART SM00062 87 304 3.8E-37 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YE2663 d6ba0b99c172f67de1e99315d538dc63 1274 SMART SM00062 328 552 4.7E-21 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YE2663 d6ba0b99c172f67de1e99315d538dc63 1274 Pfam PF00512 His Kinase A (phospho-acceptor) domain 739 802 1.6E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE2663 d6ba0b99c172f67de1e99315d538dc63 1274 SUPERFAMILY SSF53850 84 302 1.27E-21 T 22-04-2016 YE2663 d6ba0b99c172f67de1e99315d538dc63 1274 Gene3D G3DSA:3.40.50.2300 987 1106 3.7E-34 T 22-04-2016 YE2663 d6ba0b99c172f67de1e99315d538dc63 1274 Gene3D G3DSA:3.40.190.10 264 304 1.3E-6 T 22-04-2016 YE2663 d6ba0b99c172f67de1e99315d538dc63 1274 Gene3D G3DSA:3.40.190.10 85 172 1.3E-6 T 22-04-2016 YE2663 d6ba0b99c172f67de1e99315d538dc63 1274 SMART SM00448 991 1105 9.2E-32 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE2663 d6ba0b99c172f67de1e99315d538dc63 1274 SUPERFAMILY SSF47226 1088 1101 7.33E-13 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YE2663 d6ba0b99c172f67de1e99315d538dc63 1274 SUPERFAMILY SSF47226 1144 1241 7.33E-13 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YE2663 d6ba0b99c172f67de1e99315d538dc63 1274 SMART SM00387 849 965 2.3E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE2663 d6ba0b99c172f67de1e99315d538dc63 1274 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 852 964 2.7E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE2663 d6ba0b99c172f67de1e99315d538dc63 1274 SUPERFAMILY SSF55874 791 965 1.31E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE2663 d6ba0b99c172f67de1e99315d538dc63 1274 SUPERFAMILY SSF47384 723 803 1.04E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE2663 d6ba0b99c172f67de1e99315d538dc63 1274 SUPERFAMILY SSF52172 989 1108 6.12E-34 T 22-04-2016 IPR011006 CheY-like superfamily YE2663 d6ba0b99c172f67de1e99315d538dc63 1274 Pfam PF00072 Response regulator receiver domain 993 1104 1.6E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE2663 d6ba0b99c172f67de1e99315d538dc63 1274 Gene3D G3DSA:3.40.190.10 433 504 3.9E-14 T 22-04-2016 YE2663 d6ba0b99c172f67de1e99315d538dc63 1274 Gene3D G3DSA:1.10.287.130 744 798 1.7E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE2663 d6ba0b99c172f67de1e99315d538dc63 1274 Gene3D G3DSA:1.20.120.160 1149 1239 4.0E-7 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YE2663 d6ba0b99c172f67de1e99315d538dc63 1274 Gene3D G3DSA:3.30.565.10 803 969 3.8E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE2827 18785e7fb5bc0532d3f2303ec7a20d0e 179 SUPERFAMILY SSF48452 2 175 1.86E-63 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YE2827 18785e7fb5bc0532d3f2303ec7a20d0e 179 Gene3D G3DSA:1.20.58.320 3 78 3.5E-27 T 22-04-2016 YE2827 18785e7fb5bc0532d3f2303ec7a20d0e 179 Gene3D G3DSA:1.25.40.10 80 179 4.5E-35 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YE2827 18785e7fb5bc0532d3f2303ec7a20d0e 179 PANTHER PTHR23004:SF7 7 179 3.5E-63 T 22-04-2016 YE2827 18785e7fb5bc0532d3f2303ec7a20d0e 179 Pfam PF06041 Bacterial protein of unknown function (DUF924) 6 176 1.4E-58 T 22-04-2016 IPR010323 Protein of unknown function DUF924 YE2827 18785e7fb5bc0532d3f2303ec7a20d0e 179 PANTHER PTHR23004 7 179 3.5E-63 T 22-04-2016 YE0102 fdea92dfee4f44fbfefb9f40266cb0d3 161 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 46.592 T 22-04-2016 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 YE0102 fdea92dfee4f44fbfefb9f40266cb0d3 161 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 2.7E-62 T 22-04-2016 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 YE0102 fdea92dfee4f44fbfefb9f40266cb0d3 161 Pfam PF03737 Demethylmenaquinone methyltransferase 5 152 6.9E-36 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein YE0102 fdea92dfee4f44fbfefb9f40266cb0d3 161 Gene3D G3DSA:3.50.30.40 1 157 2.0E-45 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein YE0102 fdea92dfee4f44fbfefb9f40266cb0d3 161 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 161 5.2E-87 T 22-04-2016 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 YE0102 fdea92dfee4f44fbfefb9f40266cb0d3 161 SUPERFAMILY SSF89562 2 158 2.75E-44 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein YE0102 fdea92dfee4f44fbfefb9f40266cb0d3 161 PANTHER PTHR33254:SF7 1 161 3.8E-110 T 22-04-2016 YE0102 fdea92dfee4f44fbfefb9f40266cb0d3 161 PANTHER PTHR33254 1 161 3.8E-110 T 22-04-2016 YE0685 a7779d223d2fe9cf4c6be3ce85d40c0a 206 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 178 9.8E-63 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 YE0685 a7779d223d2fe9cf4c6be3ce85d40c0a 206 PANTHER PTHR10695 1 195 4.0E-78 T 22-04-2016 YE0685 a7779d223d2fe9cf4c6be3ce85d40c0a 206 Pfam PF01121 Dephospho-CoA kinase 3 177 3.5E-72 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 YE0685 a7779d223d2fe9cf4c6be3ce85d40c0a 206 SUPERFAMILY SSF52540 1 187 6.01E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0685 a7779d223d2fe9cf4c6be3ce85d40c0a 206 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 196 27.294 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 YE0685 a7779d223d2fe9cf4c6be3ce85d40c0a 206 Gene3D G3DSA:3.40.50.300 2 196 3.8E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0417 79ceeda6eed1981886037a096069a8dc 323 PANTHER PTHR12001:SF47 6 323 6.8E-126 T 22-04-2016 YE0417 79ceeda6eed1981886037a096069a8dc 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 YE0417 79ceeda6eed1981886037a096069a8dc 323 SUPERFAMILY SSF48576 5 322 8.32E-98 T 22-04-2016 IPR008949 Isoprenoid synthase domain YE0417 79ceeda6eed1981886037a096069a8dc 323 PANTHER PTHR12001 6 323 6.8E-126 T 22-04-2016 IPR017446 Polyprenyl synthetase-related YE0417 79ceeda6eed1981886037a096069a8dc 323 Gene3D G3DSA:1.10.600.10 3 322 1.5E-101 T 22-04-2016 IPR008949 Isoprenoid synthase domain YE0417 79ceeda6eed1981886037a096069a8dc 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 YE0417 79ceeda6eed1981886037a096069a8dc 323 Pfam PF00348 Polyprenyl synthetase 32 261 9.2E-75 T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 YE1454 aa93331ef378bb66d6d0a12c8a9603b9 778 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 250 260 - T 22-04-2016 IPR018030 Fimbrial membrane usher, conserved site YE1454 aa93331ef378bb66d6d0a12c8a9603b9 778 Pfam PF13954 PapC N-terminal domain 1 121 4.9E-25 T 22-04-2016 IPR025885 PapC, N-terminal domain GO:0005515 YE1454 aa93331ef378bb66d6d0a12c8a9603b9 778 SUPERFAMILY SSF141729 1 113 4.45E-18 T 22-04-2016 YE1454 aa93331ef378bb66d6d0a12c8a9603b9 778 Pfam PF00577 Outer membrane usher protein 138 687 1.7E-179 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YE1454 aa93331ef378bb66d6d0a12c8a9603b9 778 Pfam PF13953 PapC C-terminal domain 696 760 2.7E-23 T 22-04-2016 IPR025949 PapC-like, C-terminal domain YE1454 aa93331ef378bb66d6d0a12c8a9603b9 778 PANTHER PTHR30451:SF9 1 778 0.0 T 22-04-2016 YE1454 aa93331ef378bb66d6d0a12c8a9603b9 778 PANTHER PTHR30451 1 778 0.0 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YE1016 49ab443c8aa78e29f59e8dffe2c64dce 332 SUPERFAMILY SSF51306 85 331 2.67E-78 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C YE1016 49ab443c8aa78e29f59e8dffe2c64dce 332 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 266 312 1.6E-17 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 YE1016 49ab443c8aa78e29f59e8dffe2c64dce 332 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 72 166 8.5E-25 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 YE1016 49ab443c8aa78e29f59e8dffe2c64dce 332 Gene3D G3DSA:2.10.109.10 272 317 6.5E-57 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain YE1016 49ab443c8aa78e29f59e8dffe2c64dce 332 Gene3D G3DSA:2.10.109.10 83 161 6.5E-57 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain YE1016 49ab443c8aa78e29f59e8dffe2c64dce 332 Pfam PF10502 Signal peptidase, peptidase S26 270 310 3.0E-7 T 22-04-2016 IPR019533 Peptidase S26 YE1016 49ab443c8aa78e29f59e8dffe2c64dce 332 Gene3D G3DSA:2.170.230.10 162 271 1.0E-41 T 22-04-2016 IPR019766 Peptidase S26A, all-beta subdomain YE1016 49ab443c8aa78e29f59e8dffe2c64dce 332 ProSitePatterns PS00761 Signal peptidases I signature 3. 277 290 - T 22-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 YE1016 49ab443c8aa78e29f59e8dffe2c64dce 332 ProSitePatterns PS00760 Signal peptidases I lysine active site. 153 165 - T 22-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 YE1016 49ab443c8aa78e29f59e8dffe2c64dce 332 ProSitePatterns PS00501 Signal peptidases I serine active site. 96 103 - T 22-04-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: REACT_15380 YE1016 49ab443c8aa78e29f59e8dffe2c64dce 332 Pfam PF00717 Peptidase S24-like 93 165 4.1E-20 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B YE1016 49ab443c8aa78e29f59e8dffe2c64dce 332 PANTHER PTHR12383 3 182 6.7E-131 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 YE1016 49ab443c8aa78e29f59e8dffe2c64dce 332 PANTHER PTHR12383 254 316 6.7E-131 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 YE1016 49ab443c8aa78e29f59e8dffe2c64dce 332 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 87 103 2.7E-26 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 YE1016 49ab443c8aa78e29f59e8dffe2c64dce 332 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 272 291 2.7E-26 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 YE1016 49ab443c8aa78e29f59e8dffe2c64dce 332 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 151 163 2.7E-26 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 YE1016 49ab443c8aa78e29f59e8dffe2c64dce 332 PANTHER PTHR12383:SF27 3 182 6.7E-131 T 22-04-2016 YE1016 49ab443c8aa78e29f59e8dffe2c64dce 332 PANTHER PTHR12383:SF27 254 316 6.7E-131 T 22-04-2016 YE1085 352ee07eb9b92275eb4c455c3c95fa93 539 Pfam PF05199 GMC oxidoreductase 424 530 3.6E-21 T 22-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 YE1085 352ee07eb9b92275eb4c455c3c95fa93 539 Pfam PF00890 FAD binding domain 8 40 7.2E-5 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain YE1085 352ee07eb9b92275eb4c455c3c95fa93 539 Gene3D G3DSA:3.50.50.60 218 322 5.3E-62 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE1085 352ee07eb9b92275eb4c455c3c95fa93 539 Gene3D G3DSA:3.50.50.60 470 538 5.3E-62 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE1085 352ee07eb9b92275eb4c455c3c95fa93 539 Gene3D G3DSA:3.50.50.60 5 144 5.3E-62 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE1085 352ee07eb9b92275eb4c455c3c95fa93 539 Gene3D G3DSA:3.50.50.60 386 399 5.3E-62 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE1085 352ee07eb9b92275eb4c455c3c95fa93 539 SUPERFAMILY SSF54373 399 472 1.02E-6 T 22-04-2016 YE1085 352ee07eb9b92275eb4c455c3c95fa93 539 PANTHER PTHR11552 2 539 2.4E-71 T 22-04-2016 YE1085 352ee07eb9b92275eb4c455c3c95fa93 539 PANTHER PTHR11552:SF139 2 539 2.4E-71 T 22-04-2016 YE1085 352ee07eb9b92275eb4c455c3c95fa93 539 SUPERFAMILY SSF51905 479 537 2.04E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE1085 352ee07eb9b92275eb4c455c3c95fa93 539 SUPERFAMILY SSF51905 210 324 2.04E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE1085 352ee07eb9b92275eb4c455c3c95fa93 539 SUPERFAMILY SSF51905 5 179 2.04E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE3971 9433e7e00d96fc050e13a124e6cf3925 225 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 9.2E-99 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 YE3971 9433e7e00d96fc050e13a124e6cf3925 225 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 4.4E-93 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 YE3971 9433e7e00d96fc050e13a124e6cf3925 225 PANTHER PTHR11749:SF7 2 220 3.8E-145 T 22-04-2016 YE3971 9433e7e00d96fc050e13a124e6cf3925 225 SUPERFAMILY SSF51366 3 218 1.31E-76 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 YE3971 9433e7e00d96fc050e13a124e6cf3925 225 PANTHER PTHR11749 2 220 3.8E-145 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 YE3971 9433e7e00d96fc050e13a124e6cf3925 225 PIRSF PIRSF001461 1 225 7.7E-107 T 22-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 YE3971 9433e7e00d96fc050e13a124e6cf3925 225 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 YE3971 9433e7e00d96fc050e13a124e6cf3925 225 Gene3D G3DSA:3.20.20.70 1 222 1.2E-95 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YE3971 9433e7e00d96fc050e13a124e6cf3925 225 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 YE0025 7657d725b956401fda2ab52683e23ae8 470 PANTHER PTHR32071 6 470 1.7E-259 T 22-04-2016 YE0025 7657d725b956401fda2ab52683e23ae8 470 PANTHER PTHR32071:SF15 6 470 1.7E-259 T 22-04-2016 YE0025 7657d725b956401fda2ab52683e23ae8 470 SUPERFAMILY SSF52172 6 186 4.84E-47 T 22-04-2016 IPR011006 CheY-like superfamily YE0025 7657d725b956401fda2ab52683e23ae8 470 SMART SM00448 4 115 3.1E-37 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE0025 7657d725b956401fda2ab52683e23ae8 470 Gene3D G3DSA:1.10.10.60 399 470 2.0E-24 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE0025 7657d725b956401fda2ab52683e23ae8 470 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site YE0025 7657d725b956401fda2ab52683e23ae8 470 SUPERFAMILY SSF52540 140 384 1.23E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0025 7657d725b956401fda2ab52683e23ae8 470 Gene3D G3DSA:3.40.50.2300 6 135 2.9E-38 T 22-04-2016 YE0025 7657d725b956401fda2ab52683e23ae8 470 SUPERFAMILY SSF46689 381 470 1.4E-24 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE0025 7657d725b956401fda2ab52683e23ae8 470 SMART SM00382 161 312 4.3E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain YE0025 7657d725b956401fda2ab52683e23ae8 470 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 467 1.1E-245 T 22-04-2016 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 YE0025 7657d725b956401fda2ab52683e23ae8 470 Pfam PF00158 Sigma-54 interaction domain 141 307 4.6E-70 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 YE0025 7657d725b956401fda2ab52683e23ae8 470 Gene3D G3DSA:1.10.8.60 314 392 2.1E-24 T 22-04-2016 YE0025 7657d725b956401fda2ab52683e23ae8 470 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 227 242 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YE0025 7657d725b956401fda2ab52683e23ae8 470 Pfam PF02954 Bacterial regulatory protein, Fis family 428 467 1.6E-15 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YE0025 7657d725b956401fda2ab52683e23ae8 470 Pfam PF00072 Response regulator receiver domain 6 115 2.2E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE0025 7657d725b956401fda2ab52683e23ae8 470 Gene3D G3DSA:3.40.50.300 139 313 3.0E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0025 7657d725b956401fda2ab52683e23ae8 470 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 450 470 8.0E-11 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YE0025 7657d725b956401fda2ab52683e23ae8 470 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 433 450 8.0E-11 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YE0025 7657d725b956401fda2ab52683e23ae8 470 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 165 178 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YE2719a a084187a53adb45c5cce1646c872b886 263 PANTHER PTHR21091:SF17 13 221 4.2E-71 T 22-04-2016 YE2719a a084187a53adb45c5cce1646c872b886 263 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 15 221 5.3E-42 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 YE2719a a084187a53adb45c5cce1646c872b886 263 SUPERFAMILY SSF53790 11 261 2.22E-66 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 YE2719a a084187a53adb45c5cce1646c872b886 263 PANTHER PTHR21091 13 221 4.2E-71 T 22-04-2016 YE2719a a084187a53adb45c5cce1646c872b886 263 Gene3D G3DSA:3.30.950.10 124 261 5.6E-38 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 YE2719a a084187a53adb45c5cce1646c872b886 263 Gene3D G3DSA:3.40.1010.10 14 123 1.9E-30 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 YE2719a a084187a53adb45c5cce1646c872b886 263 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 19 33 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YE2719a a084187a53adb45c5cce1646c872b886 263 TIGRFAM TIGR01465 cobM_cbiF: precorrin-4 C11-methyltransferase 16 261 1.6E-97 T 22-04-2016 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase GO:0009236|GO:0046026 YE0635 f59ccb1cc74f012bca0f1277c565c585 196 PANTHER PTHR11079 1 193 4.3E-70 T 22-04-2016 YE0635 f59ccb1cc74f012bca0f1277c565c585 196 Pfam PF00849 RNA pseudouridylate synthase 2 146 1.4E-25 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 YE0635 f59ccb1cc74f012bca0f1277c565c585 196 SUPERFAMILY SSF55120 1 193 2.24E-55 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 YE0635 f59ccb1cc74f012bca0f1277c565c585 196 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 37 51 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 YE0635 f59ccb1cc74f012bca0f1277c565c585 196 PANTHER PTHR11079:SF86 1 193 4.3E-70 T 22-04-2016 YE0082 206df87f38619fcd6c8508de7ae1ee26 273 Gene3D G3DSA:2.160.10.10 143 251 2.2E-31 T 22-04-2016 YE0082 206df87f38619fcd6c8508de7ae1ee26 273 Gene3D G3DSA:1.10.3130.10 7 142 1.3E-49 T 22-04-2016 YE0082 206df87f38619fcd6c8508de7ae1ee26 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 193 226 6.0E-10 T 22-04-2016 IPR001451 Hexapeptide repeat YE0082 206df87f38619fcd6c8508de7ae1ee26 273 PANTHER PTHR23416 5 258 3.3E-155 T 22-04-2016 YE0082 206df87f38619fcd6c8508de7ae1ee26 273 Pfam PF06426 Serine acetyltransferase, N-terminal 9 113 8.3E-38 T 22-04-2016 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 YE0082 206df87f38619fcd6c8508de7ae1ee26 273 SMART SM00971 9 113 4.5E-60 T 22-04-2016 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 YE0082 206df87f38619fcd6c8508de7ae1ee26 273 PANTHER PTHR23416:SF2 5 258 3.3E-155 T 22-04-2016 YE0082 206df87f38619fcd6c8508de7ae1ee26 273 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 83 242 1.4E-73 T 22-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 YE0082 206df87f38619fcd6c8508de7ae1ee26 273 SUPERFAMILY SSF51161 9 260 7.76E-66 T 22-04-2016 IPR011004 Trimeric LpxA-like YE0082 206df87f38619fcd6c8508de7ae1ee26 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 202 230 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 YE3204 a52336b5471f86a64a6707bacbf53422 415 Gene3D G3DSA:3.40.50.1820 154 302 1.9E-22 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE3204 a52336b5471f86a64a6707bacbf53422 415 Gene3D G3DSA:3.40.50.1820 347 385 1.9E-22 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE3204 a52336b5471f86a64a6707bacbf53422 415 PANTHER PTHR11614:SF87 117 302 5.4E-42 T 22-04-2016 YE3204 a52336b5471f86a64a6707bacbf53422 415 PANTHER PTHR11614 117 302 5.4E-42 T 22-04-2016 YE3204 a52336b5471f86a64a6707bacbf53422 415 SUPERFAMILY SSF53474 46 411 9.36E-53 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE3204 a52336b5471f86a64a6707bacbf53422 415 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 1 414 5.4E-216 T 22-04-2016 IPR010520 UPF0255 family YE3204 a52336b5471f86a64a6707bacbf53422 415 Hamap MF_01063 Esterase FrsA [frsA]. 1 415 65.162 T 22-04-2016 IPR010520 UPF0255 family YE0395 fe00e2848b42c1710a19fc198fa80d12 150 SUPERFAMILY SSF55658 1 57 4.01E-19 T 22-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal YE0395 fe00e2848b42c1710a19fc198fa80d12 150 Gene3D G3DSA:3.10.430.100 62 149 4.0E-27 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal YE0395 fe00e2848b42c1710a19fc198fa80d12 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal YE0395 fe00e2848b42c1710a19fc198fa80d12 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 1.2E-58 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0395 fe00e2848b42c1710a19fc198fa80d12 150 Gene3D G3DSA:3.40.5.10 1 52 2.6E-25 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal YE0395 fe00e2848b42c1710a19fc198fa80d12 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 45 3.9E-22 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal YE0395 fe00e2848b42c1710a19fc198fa80d12 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 25.186 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0395 fe00e2848b42c1710a19fc198fa80d12 150 SUPERFAMILY SSF55653 61 149 3.14E-25 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal YE0395 fe00e2848b42c1710a19fc198fa80d12 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 147 5.9E-25 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal YE0395 fe00e2848b42c1710a19fc198fa80d12 150 PANTHER PTHR21368 1 150 2.5E-52 T 22-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3792 36af524070266429477ca34398ed6ae0 152 Pfam PF00545 ribonuclease 62 149 2.8E-25 T 22-04-2016 IPR000026 Guanine-specific ribonuclease N1/T1/U2 GO:0003723|GO:0004521 YE3792 36af524070266429477ca34398ed6ae0 152 PRINTS PR00117 Barnase signature 49 66 1.2E-29 T 22-04-2016 IPR001887 Barnase GO:0003723|GO:0004521 YE3792 36af524070266429477ca34398ed6ae0 152 PRINTS PR00117 Barnase signature 110 129 1.2E-29 T 22-04-2016 IPR001887 Barnase GO:0003723|GO:0004521 YE3792 36af524070266429477ca34398ed6ae0 152 PRINTS PR00117 Barnase signature 89 107 1.2E-29 T 22-04-2016 IPR001887 Barnase GO:0003723|GO:0004521 YE3792 36af524070266429477ca34398ed6ae0 152 PRINTS PR00117 Barnase signature 132 150 1.2E-29 T 22-04-2016 IPR001887 Barnase GO:0003723|GO:0004521 YE3792 36af524070266429477ca34398ed6ae0 152 PRINTS PR00117 Barnase signature 69 86 1.2E-29 T 22-04-2016 IPR001887 Barnase GO:0003723|GO:0004521 YE3792 36af524070266429477ca34398ed6ae0 152 PIRSF PIRSF001013 1 152 2.4E-66 T 22-04-2016 IPR001887 Barnase GO:0003723|GO:0004521 YE3792 36af524070266429477ca34398ed6ae0 152 SUPERFAMILY SSF53933 46 151 6.8E-39 T 22-04-2016 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 YE3792 36af524070266429477ca34398ed6ae0 152 Gene3D G3DSA:3.10.450.30 44 152 1.7E-45 T 22-04-2016 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 YE2584 261e983ef0d134e69c4b3b5d466f4c86 344 SUPERFAMILY SSF50129 7 146 2.05E-45 T 22-04-2016 IPR011032 GroES-like YE2584 261e983ef0d134e69c4b3b5d466f4c86 344 Pfam PF16884 N-terminal domain of oxidoreductase 9 114 2.0E-43 T 22-04-2016 YE2584 261e983ef0d134e69c4b3b5d466f4c86 344 Gene3D G3DSA:3.40.50.720 143 309 6.9E-68 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2584 261e983ef0d134e69c4b3b5d466f4c86 344 SMART SM00829 22 339 3.0E-6 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 YE2584 261e983ef0d134e69c4b3b5d466f4c86 344 Pfam PF00107 Zinc-binding dehydrogenase 161 289 3.4E-19 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 YE2584 261e983ef0d134e69c4b3b5d466f4c86 344 SUPERFAMILY SSF51735 126 307 2.19E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2584 261e983ef0d134e69c4b3b5d466f4c86 344 PANTHER PTHR11695:SF557 26 344 6.1E-183 T 22-04-2016 YE2584 261e983ef0d134e69c4b3b5d466f4c86 344 Gene3D G3DSA:3.90.180.10 5 142 4.1E-57 T 22-04-2016 IPR011032 GroES-like YE2584 261e983ef0d134e69c4b3b5d466f4c86 344 PANTHER PTHR11695 26 344 6.1E-183 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 YE0883 594bdb65f1c69e277b27c81d68866a97 514 PANTHER PTHR35191 381 467 2.4E-12 T 22-04-2016 YE0883 594bdb65f1c69e277b27c81d68866a97 514 Pfam PF03406 Phage tail fibre repeat 304 335 5.0E-10 T 22-04-2016 IPR005068 Bacteriophage lambda, Stf, side tail fibre-repeat-2 YE0883 594bdb65f1c69e277b27c81d68866a97 514 Pfam PF07484 Phage Tail Collar Domain 385 437 1.2E-10 T 22-04-2016 IPR011083 Phage tail collar domain YE0883 594bdb65f1c69e277b27c81d68866a97 514 Gene3D G3DSA:3.90.1340.10 378 442 1.8E-5 T 22-04-2016 IPR011083 Phage tail collar domain YE0883 594bdb65f1c69e277b27c81d68866a97 514 Pfam PF12571 Phage tail-collar fibre protein 3 158 1.4E-34 T 22-04-2016 IPR022225 Phage tail fibre protein YE0883 594bdb65f1c69e277b27c81d68866a97 514 SUPERFAMILY SSF88874 377 513 1.96E-32 T 22-04-2016 YE1865 e87628e05ed82a771bb792d92ce8bbd9 415 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 7 405 6.2E-173 T 22-04-2016 IPR005219 Conserved hypothetical protein CHP00155 YE1865 e87628e05ed82a771bb792d92ce8bbd9 415 PANTHER PTHR30462 1 415 5.4E-259 T 22-04-2016 YE1865 e87628e05ed82a771bb792d92ce8bbd9 415 Pfam PF04403 Paraquat-inducible protein A 53 204 1.0E-38 T 22-04-2016 IPR007498 Paraquat-inducible protein A YE1865 e87628e05ed82a771bb792d92ce8bbd9 415 Pfam PF04403 Paraquat-inducible protein A 250 405 1.1E-46 T 22-04-2016 IPR007498 Paraquat-inducible protein A YE1865 e87628e05ed82a771bb792d92ce8bbd9 415 PANTHER PTHR30462:SF1 1 415 5.4E-259 T 22-04-2016 YE2350 aad46de8e60541915063f5af39e4e88b 199 SUPERFAMILY SSF47413 2 70 2.76E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE2350 aad46de8e60541915063f5af39e4e88b 199 Gene3D G3DSA:2.10.109.10 126 197 5.3E-6 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain YE2350 aad46de8e60541915063f5af39e4e88b 199 SMART SM00530 8 63 5.1E-8 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YE2350 aad46de8e60541915063f5af39e4e88b 199 SUPERFAMILY SSF51306 127 196 2.62E-6 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C YE2350 aad46de8e60541915063f5af39e4e88b 199 Gene3D G3DSA:1.10.260.40 4 70 5.9E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE2350 aad46de8e60541915063f5af39e4e88b 199 Pfam PF01381 Helix-turn-helix 17 63 7.8E-8 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YE3566 a16f672ce5d2616719dfc7505fb6bb47 498 PANTHER PTHR30258:SF9 11 494 6.2E-257 T 22-04-2016 YE3566 a16f672ce5d2616719dfc7505fb6bb47 498 Gene3D G3DSA:3.40.50.300 225 494 6.1E-97 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3566 a16f672ce5d2616719dfc7505fb6bb47 498 PANTHER PTHR30258 11 494 6.2E-257 T 22-04-2016 YE3566 a16f672ce5d2616719dfc7505fb6bb47 498 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 314 328 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 YE3566 a16f672ce5d2616719dfc7505fb6bb47 498 SUPERFAMILY SSF52540 105 493 1.32E-101 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3566 a16f672ce5d2616719dfc7505fb6bb47 498 Gene3D G3DSA:3.30.450.90 92 219 2.5E-53 T 22-04-2016 YE3566 a16f672ce5d2616719dfc7505fb6bb47 498 Pfam PF00437 Type II/IV secretion system protein 121 386 5.0E-87 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 YE3566 a16f672ce5d2616719dfc7505fb6bb47 498 SUPERFAMILY SSF160246 9 73 1.67E-10 T 22-04-2016 YE3566 a16f672ce5d2616719dfc7505fb6bb47 498 SMART SM00382 247 373 1.8E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain YE3566 a16f672ce5d2616719dfc7505fb6bb47 498 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 10 493 7.0E-205 T 22-04-2016 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 YE0081 001c1d955ec558cc29cd9aa44646405a 339 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 6 326 38.078 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 YE0081 001c1d955ec558cc29cd9aa44646405a 339 PIRSF PIRSF000114 1 336 1.3E-100 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 YE0081 001c1d955ec558cc29cd9aa44646405a 339 Gene3D G3DSA:3.50.50.60 6 23 1.2E-4 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE0081 001c1d955ec558cc29cd9aa44646405a 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 136 156 9.5E-42 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 YE0081 001c1d955ec558cc29cd9aa44646405a 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 242 259 9.5E-42 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 YE0081 001c1d955ec558cc29cd9aa44646405a 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 10 27 9.5E-42 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 YE0081 001c1d955ec558cc29cd9aa44646405a 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 60 87 9.5E-42 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 YE0081 001c1d955ec558cc29cd9aa44646405a 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 202 226 9.5E-42 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 YE0081 001c1d955ec558cc29cd9aa44646405a 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 177 201 9.5E-42 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 YE0081 001c1d955ec558cc29cd9aa44646405a 339 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 192 213 - T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 YE0081 001c1d955ec558cc29cd9aa44646405a 339 Gene3D G3DSA:3.40.50.720 24 182 5.7E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain YE0081 001c1d955ec558cc29cd9aa44646405a 339 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 8 162 9.8E-52 T 22-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 YE0081 001c1d955ec558cc29cd9aa44646405a 339 PANTHER PTHR11728 8 339 5.2E-150 T 22-04-2016 YE0081 001c1d955ec558cc29cd9aa44646405a 339 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 184 323 1.1E-52 T 22-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 YE0081 001c1d955ec558cc29cd9aa44646405a 339 SUPERFAMILY SSF48179 184 335 8.84E-58 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 YE0081 001c1d955ec558cc29cd9aa44646405a 339 Gene3D G3DSA:1.10.1040.10 184 330 2.0E-58 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 YE0081 001c1d955ec558cc29cd9aa44646405a 339 SUPERFAMILY SSF51735 8 182 1.67E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3659 eb0fa3c0a87538d4e854358cded3a119 305 PANTHER PTHR30537 1 302 9.2E-206 T 22-04-2016 YE3659 eb0fa3c0a87538d4e854358cded3a119 305 Gene3D G3DSA:1.10.10.10 2 84 6.3E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3659 eb0fa3c0a87538d4e854358cded3a119 305 SUPERFAMILY SSF53850 91 294 4.81E-37 T 22-04-2016 YE3659 eb0fa3c0a87538d4e854358cded3a119 305 PANTHER PTHR30537:SF20 1 302 9.2E-206 T 22-04-2016 YE3659 eb0fa3c0a87538d4e854358cded3a119 305 Pfam PF03466 LysR substrate binding domain 91 292 5.8E-35 T 22-04-2016 IPR005119 LysR, substrate-binding YE3659 eb0fa3c0a87538d4e854358cded3a119 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 8.1E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE3659 eb0fa3c0a87538d4e854358cded3a119 305 Gene3D G3DSA:3.40.190.10 93 192 1.2E-25 T 22-04-2016 YE3659 eb0fa3c0a87538d4e854358cded3a119 305 SUPERFAMILY SSF46785 3 112 1.75E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3033 c65240b88b7cff8f6a1c1f3ec0b29457 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.8E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE3033 c65240b88b7cff8f6a1c1f3ec0b29457 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.8E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE3033 c65240b88b7cff8f6a1c1f3ec0b29457 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.8E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE3033 c65240b88b7cff8f6a1c1f3ec0b29457 303 SUPERFAMILY SSF53850 93 298 7.24E-46 T 22-04-2016 YE3033 c65240b88b7cff8f6a1c1f3ec0b29457 303 PANTHER PTHR30537 1 295 8.1E-102 T 22-04-2016 YE3033 c65240b88b7cff8f6a1c1f3ec0b29457 303 Gene3D G3DSA:1.10.10.10 10 88 4.8E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3033 c65240b88b7cff8f6a1c1f3ec0b29457 303 Pfam PF03466 LysR substrate binding domain 92 296 2.3E-44 T 22-04-2016 IPR005119 LysR, substrate-binding YE3033 c65240b88b7cff8f6a1c1f3ec0b29457 303 Gene3D G3DSA:3.40.190.10 180 262 6.7E-21 T 22-04-2016 YE3033 c65240b88b7cff8f6a1c1f3ec0b29457 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 3.4E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE3033 c65240b88b7cff8f6a1c1f3ec0b29457 303 Gene3D G3DSA:3.40.190.10 95 179 7.9E-22 T 22-04-2016 YE3033 c65240b88b7cff8f6a1c1f3ec0b29457 303 PANTHER PTHR30537:SF5 1 295 8.1E-102 T 22-04-2016 YE3033 c65240b88b7cff8f6a1c1f3ec0b29457 303 SUPERFAMILY SSF46785 8 87 6.0E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2375 8fdbb4d90161b7dbab3b2fe6a366b8c3 564 Gene3D G3DSA:2.30.38.10 380 451 4.1E-30 T 22-04-2016 YE2375 8fdbb4d90161b7dbab3b2fe6a366b8c3 564 Gene3D G3DSA:3.40.50.980 24 152 4.5E-41 T 22-04-2016 YE2375 8fdbb4d90161b7dbab3b2fe6a366b8c3 564 Gene3D G3DSA:3.40.50.980 185 216 4.5E-41 T 22-04-2016 YE2375 8fdbb4d90161b7dbab3b2fe6a366b8c3 564 Pfam PF13193 AMP-binding enzyme C-terminal domain 469 543 1.2E-16 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain YE2375 8fdbb4d90161b7dbab3b2fe6a366b8c3 564 Gene3D G3DSA:3.40.50.980 217 379 7.0E-41 T 22-04-2016 YE2375 8fdbb4d90161b7dbab3b2fe6a366b8c3 564 Pfam PF00501 AMP-binding enzyme 29 460 1.1E-110 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 YE2375 8fdbb4d90161b7dbab3b2fe6a366b8c3 564 PANTHER PTHR24096 176 554 1.6E-173 T 22-04-2016 YE2375 8fdbb4d90161b7dbab3b2fe6a366b8c3 564 PANTHER PTHR24096 8 153 1.6E-173 T 22-04-2016 YE2375 8fdbb4d90161b7dbab3b2fe6a366b8c3 564 SUPERFAMILY SSF56801 17 552 3.79E-149 T 22-04-2016 YE2375 8fdbb4d90161b7dbab3b2fe6a366b8c3 564 Gene3D G3DSA:3.30.300.30 457 558 3.9E-27 T 22-04-2016 YE2375 8fdbb4d90161b7dbab3b2fe6a366b8c3 564 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 22-04-2016 IPR020845 AMP-binding, conserved site YE0560 658fb6a9fc06c6a61681df7483a31534 330 Gene3D G3DSA:3.20.20.100 1 320 8.2E-118 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YE0560 658fb6a9fc06c6a61681df7483a31534 330 PANTHER PTHR11732 1 311 2.7E-159 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta YE0560 658fb6a9fc06c6a61681df7483a31534 330 SUPERFAMILY SSF51430 1 311 6.15E-104 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YE0560 658fb6a9fc06c6a61681df7483a31534 330 Pfam PF00248 Aldo/keto reductase family 16 308 6.0E-78 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YE0560 658fb6a9fc06c6a61681df7483a31534 330 PANTHER PTHR11732:SF225 1 311 2.7E-159 T 22-04-2016 YE2940 19334b9a21831f56fec93ee81af46866 632 Pfam PF00149 Calcineurin-like phosphoesterase 25 243 2.6E-13 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 YE2940 19334b9a21831f56fec93ee81af46866 632 PANTHER PTHR11575:SF27 4 420 9.6E-148 T 22-04-2016 YE2940 19334b9a21831f56fec93ee81af46866 632 PANTHER PTHR11575:SF27 436 585 9.6E-148 T 22-04-2016 YE2940 19334b9a21831f56fec93ee81af46866 632 Gene3D G3DSA:3.90.780.10 337 546 1.4E-20 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 YE2940 19334b9a21831f56fec93ee81af46866 632 PRINTS PR01607 Apyrase family signature 253 273 4.1E-11 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 YE2940 19334b9a21831f56fec93ee81af46866 632 PRINTS PR01607 Apyrase family signature 199 216 4.1E-11 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 YE2940 19334b9a21831f56fec93ee81af46866 632 PRINTS PR01607 Apyrase family signature 226 249 4.1E-11 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 YE2940 19334b9a21831f56fec93ee81af46866 632 PRINTS PR01607 Apyrase family signature 22 40 4.1E-11 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 YE2940 19334b9a21831f56fec93ee81af46866 632 Pfam PF02872 5'-nucleotidase, C-terminal domain 338 488 8.8E-19 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 YE2940 19334b9a21831f56fec93ee81af46866 632 SUPERFAMILY SSF56300 15 323 1.66E-76 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like YE2940 19334b9a21831f56fec93ee81af46866 632 ProSitePatterns PS00786 5'-nucleotidase signature 2. 103 114 - T 22-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 YE2940 19334b9a21831f56fec93ee81af46866 632 Gene3D G3DSA:3.60.21.10 18 313 6.8E-81 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like YE2940 19334b9a21831f56fec93ee81af46866 632 SUPERFAMILY SSF55816 337 547 7.72E-24 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 YE2940 19334b9a21831f56fec93ee81af46866 632 PANTHER PTHR11575 4 420 9.6E-148 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 YE2940 19334b9a21831f56fec93ee81af46866 632 PANTHER PTHR11575 436 585 9.6E-148 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 YE1671 5db80325d27cd65f4cd8ffb4791aa979 141 TIGRFAM TIGR03495 phage_LysB: phage lysis regulatory protein, LysB family 10 135 4.1E-45 T 22-04-2016 IPR020000 Bacteriophage P2, LysB YE3286 b264e5be7d012ea5bc4cff3e9699926e 892 SUPERFAMILY SSF81593 211 330 1.18E-10 T 22-04-2016 YE3286 b264e5be7d012ea5bc4cff3e9699926e 892 Pfam PF01909 Nucleotidyltransferase domain 88 126 1.5E-6 T 22-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 YE3286 b264e5be7d012ea5bc4cff3e9699926e 892 Pfam PF01966 HD domain 470 603 4.7E-14 T 22-04-2016 IPR006674 HD domain YE3286 b264e5be7d012ea5bc4cff3e9699926e 892 PANTHER PTHR13734:SF45 114 706 5.3E-164 T 22-04-2016 YE3286 b264e5be7d012ea5bc4cff3e9699926e 892 Gene3D G3DSA:3.30.460.10 89 183 1.7E-6 T 22-04-2016 YE3286 b264e5be7d012ea5bc4cff3e9699926e 892 PANTHER PTHR13734 114 706 5.3E-164 T 22-04-2016 YE3286 b264e5be7d012ea5bc4cff3e9699926e 892 SUPERFAMILY SSF81891 431 471 5.69E-9 T 22-04-2016 YE3286 b264e5be7d012ea5bc4cff3e9699926e 892 SUPERFAMILY SSF81891 506 650 5.69E-9 T 22-04-2016 YE3286 b264e5be7d012ea5bc4cff3e9699926e 892 PIRSF PIRSF006288 24 892 0.0 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 YE3286 b264e5be7d012ea5bc4cff3e9699926e 892 SUPERFAMILY SSF55021 815 884 4.2E-10 T 22-04-2016 YE3286 b264e5be7d012ea5bc4cff3e9699926e 892 SUPERFAMILY SSF81301 12 191 4.91E-24 T 22-04-2016 YE3286 b264e5be7d012ea5bc4cff3e9699926e 892 SMART SM00471 466 613 2.1E-11 T 22-04-2016 IPR003607 HD/PDEase domain YE3286 b264e5be7d012ea5bc4cff3e9699926e 892 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 892 343.322 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 YE3286 b264e5be7d012ea5bc4cff3e9699926e 892 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 56 886 2.0E-301 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 YE3286 b264e5be7d012ea5bc4cff3e9699926e 892 SUPERFAMILY SSF109604 459 560 1.57E-13 T 22-04-2016 YE3286 b264e5be7d012ea5bc4cff3e9699926e 892 Pfam PF08335 GlnD PII-uridylyltransferase 195 333 8.7E-37 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 YE3286 b264e5be7d012ea5bc4cff3e9699926e 892 Gene3D G3DSA:3.30.70.260 710 766 4.9E-4 T 22-04-2016 YE3286 b264e5be7d012ea5bc4cff3e9699926e 892 Gene3D G3DSA:3.30.70.260 814 882 1.2E-9 T 22-04-2016 YE3286 b264e5be7d012ea5bc4cff3e9699926e 892 Pfam PF01842 ACT domain 817 871 2.1E-8 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 YE3286 b264e5be7d012ea5bc4cff3e9699926e 892 SUPERFAMILY SSF55021 707 761 8.02E-10 T 22-04-2016 YE3286 b264e5be7d012ea5bc4cff3e9699926e 892 Gene3D G3DSA:1.10.3210.10 440 631 7.8E-27 T 22-04-2016 IPR006674 HD domain YE0801 fda5b5005a477ea9715b167a7594240a 285 PANTHER PTHR18966:SF152 35 269 2.8E-23 T 22-04-2016 YE0801 fda5b5005a477ea9715b167a7594240a 285 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 40 270 1.2E-43 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YE0801 fda5b5005a477ea9715b167a7594240a 285 PANTHER PTHR18966 35 269 2.8E-23 T 22-04-2016 YE0801 fda5b5005a477ea9715b167a7594240a 285 Gene3D G3DSA:3.40.190.10 18 144 5.4E-33 T 22-04-2016 YE0801 fda5b5005a477ea9715b167a7594240a 285 Gene3D G3DSA:3.40.190.10 145 225 8.0E-19 T 22-04-2016 YE0801 fda5b5005a477ea9715b167a7594240a 285 SUPERFAMILY SSF53850 12 270 1.92E-49 T 22-04-2016 YE0801 fda5b5005a477ea9715b167a7594240a 285 SMART SM00062 39 272 5.1E-41 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YE0422 c5060f4a7658b43ea39133d1a2d0c506 353 Gene3D G3DSA:3.30.565.10 208 349 2.4E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE0422 c5060f4a7658b43ea39133d1a2d0c506 353 PANTHER PTHR24423 77 348 1.4E-164 T 22-04-2016 YE0422 c5060f4a7658b43ea39133d1a2d0c506 353 Pfam PF00512 His Kinase A (phospho-acceptor) domain 138 195 6.8E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE0422 c5060f4a7658b43ea39133d1a2d0c506 353 Pfam PF00672 HAMP domain 65 131 3.6E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YE0422 c5060f4a7658b43ea39133d1a2d0c506 353 Gene3D G3DSA:1.10.287.130 128 192 2.4E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE0422 c5060f4a7658b43ea39133d1a2d0c506 353 PRINTS PR00344 Bacterial sensor protein C-terminal signature 279 293 2.8E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE0422 c5060f4a7658b43ea39133d1a2d0c506 353 PRINTS PR00344 Bacterial sensor protein C-terminal signature 310 328 2.8E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE0422 c5060f4a7658b43ea39133d1a2d0c506 353 SMART SM00387 242 351 1.0E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE0422 c5060f4a7658b43ea39133d1a2d0c506 353 SUPERFAMILY SSF47384 121 194 1.53E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE0422 c5060f4a7658b43ea39133d1a2d0c506 353 PANTHER PTHR24423:SF538 77 348 1.4E-164 T 22-04-2016 YE0422 c5060f4a7658b43ea39133d1a2d0c506 353 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 242 349 9.1E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE0422 c5060f4a7658b43ea39133d1a2d0c506 353 SUPERFAMILY SSF55874 186 349 4.32E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE0422 c5060f4a7658b43ea39133d1a2d0c506 353 SMART SM00388 136 196 1.7E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE1914 dedc5837c42fa6f23456f303a912e8c1 65 Pfam PF01632 Ribosomal protein L35 2 60 1.3E-22 T 22-04-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE1914 dedc5837c42fa6f23456f303a912e8c1 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 22-04-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE1914 dedc5837c42fa6f23456f303a912e8c1 65 PANTHER PTHR33343 1 65 4.7E-28 T 22-04-2016 YE1914 dedc5837c42fa6f23456f303a912e8c1 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 1.4E-26 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 YE1914 dedc5837c42fa6f23456f303a912e8c1 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 4.0E-22 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 YE1914 dedc5837c42fa6f23456f303a912e8c1 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 4.0E-22 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 YE1914 dedc5837c42fa6f23456f303a912e8c1 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 4.0E-22 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 YE1914 dedc5837c42fa6f23456f303a912e8c1 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 17.995 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 YE1914 dedc5837c42fa6f23456f303a912e8c1 65 SUPERFAMILY SSF143034 2 64 3.14E-22 T 22-04-2016 YE0437 d0d9bac1be817786de5236d44201e126 89 Gene3D G3DSA:1.10.287.10 3 89 2.6E-38 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 YE0437 d0d9bac1be817786de5236d44201e126 89 PANTHER PTHR23321 1 89 1.6E-48 T 22-04-2016 YE0437 d0d9bac1be817786de5236d44201e126 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.735 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 YE0437 d0d9bac1be817786de5236d44201e126 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 1.0E-39 T 22-04-2016 YE0437 d0d9bac1be817786de5236d44201e126 89 SMART SM01387 8 88 6.4E-51 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0437 d0d9bac1be817786de5236d44201e126 89 SUPERFAMILY SSF47060 3 89 2.68E-34 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 YE0437 d0d9bac1be817786de5236d44201e126 89 Pfam PF00312 Ribosomal protein S15 8 88 4.5E-37 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0437 d0d9bac1be817786de5236d44201e126 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 2.1E-39 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 YE0437 d0d9bac1be817786de5236d44201e126 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE1200 6208a0dde98d645e285238a699edc496 402 PANTHER PTHR30572:SF3 1 388 4.8E-152 T 22-04-2016 YE1200 6208a0dde98d645e285238a699edc496 402 PANTHER PTHR30572 1 388 4.8E-152 T 22-04-2016 YE1200 6208a0dde98d645e285238a699edc496 402 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 48 269 1.2E-18 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YE1200 6208a0dde98d645e285238a699edc496 402 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 273 8.1E-37 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 YE1200 6208a0dde98d645e285238a699edc496 402 Gene3D G3DSA:2.40.50.100 185 217 7.8E-20 T 22-04-2016 YE1200 6208a0dde98d645e285238a699edc496 402 Gene3D G3DSA:2.40.50.100 63 96 7.8E-20 T 22-04-2016 YE1200 6208a0dde98d645e285238a699edc496 402 SUPERFAMILY SSF111369 54 264 2.22E-22 T 22-04-2016 YE2451 0bf78b37ffdddbc7277933370d448757 248 SMART SM00257 46 90 2.0E-10 T 22-04-2016 IPR018392 LysM domain YE2451 0bf78b37ffdddbc7277933370d448757 248 Pfam PF01476 LysM domain 47 89 2.9E-10 T 22-04-2016 IPR018392 LysM domain YE2451 0bf78b37ffdddbc7277933370d448757 248 Gene3D G3DSA:3.10.350.10 46 89 1.9E-12 T 22-04-2016 IPR018392 LysM domain YE2451 0bf78b37ffdddbc7277933370d448757 248 Pfam PF01551 Peptidase family M23 142 235 1.7E-30 T 22-04-2016 IPR016047 Peptidase M23 YE2451 0bf78b37ffdddbc7277933370d448757 248 SUPERFAMILY SSF51261 47 239 6.28E-49 T 22-04-2016 IPR011055 Duplicated hybrid motif YE2451 0bf78b37ffdddbc7277933370d448757 248 Gene3D G3DSA:2.70.70.10 102 240 7.6E-41 T 22-04-2016 YE2451 0bf78b37ffdddbc7277933370d448757 248 PANTHER PTHR21666:SF222 99 243 5.4E-78 T 22-04-2016 YE2451 0bf78b37ffdddbc7277933370d448757 248 PANTHER PTHR21666 99 243 5.4E-78 T 22-04-2016 YE2666 2267053f5e5e8525f04b4d3be805de43 874 PANTHER PTHR30451 1 555 0.0 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YE2666 2267053f5e5e8525f04b4d3be805de43 874 PANTHER PTHR30451:SF7 1 555 0.0 T 22-04-2016 YE2666 2267053f5e5e8525f04b4d3be805de43 874 SUPERFAMILY SSF141729 31 151 2.88E-29 T 22-04-2016 YE2666 2267053f5e5e8525f04b4d3be805de43 874 PANTHER PTHR30451 577 873 0.0 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YE2666 2267053f5e5e8525f04b4d3be805de43 874 Pfam PF00577 Outer membrane usher protein 192 769 1.7E-138 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YE2666 2267053f5e5e8525f04b4d3be805de43 874 Pfam PF13954 PapC N-terminal domain 34 173 5.2E-36 T 22-04-2016 IPR025885 PapC, N-terminal domain GO:0005515 YE2666 2267053f5e5e8525f04b4d3be805de43 874 Pfam PF13953 PapC C-terminal domain 778 853 7.6E-17 T 22-04-2016 IPR025949 PapC-like, C-terminal domain YE2666 2267053f5e5e8525f04b4d3be805de43 874 PANTHER PTHR30451:SF7 577 873 0.0 T 22-04-2016 YE1637 ccabd8ff7951889727d36a44c5b655d5 412 Gene3D G3DSA:3.40.47.10 2 260 5.0E-76 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YE1637 ccabd8ff7951889727d36a44c5b655d5 412 SUPERFAMILY SSF53901 4 252 1.55E-76 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YE1637 ccabd8ff7951889727d36a44c5b655d5 412 Gene3D G3DSA:3.40.47.10 263 411 2.9E-63 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YE1637 ccabd8ff7951889727d36a44c5b655d5 412 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site YE1637 ccabd8ff7951889727d36a44c5b655d5 412 PANTHER PTHR11712 3 411 5.5E-209 T 22-04-2016 YE1637 ccabd8ff7951889727d36a44c5b655d5 412 SUPERFAMILY SSF53901 215 411 1.23E-71 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YE1637 ccabd8ff7951889727d36a44c5b655d5 412 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 368 6.0E-39 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal YE1637 ccabd8ff7951889727d36a44c5b655d5 412 SMART SM00825 Beta-ketoacyl synthase 6 412 6.9E-15 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YE1637 ccabd8ff7951889727d36a44c5b655d5 412 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 1.1E-60 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal YE1637 ccabd8ff7951889727d36a44c5b655d5 412 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 410 4.9E-193 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 YE1637 ccabd8ff7951889727d36a44c5b655d5 412 PIRSF PIRSF000447 1 412 2.4E-200 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 YE0128 b39e391e126bc2a2687768b949e8bf2f 410 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 2 410 1.7E-106 T 22-04-2016 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 YE0128 b39e391e126bc2a2687768b949e8bf2f 410 SUPERFAMILY SSF111369 33 92 6.02E-5 T 22-04-2016 YE0128 b39e391e126bc2a2687768b949e8bf2f 410 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 3 26 1.4E-49 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YE0128 b39e391e126bc2a2687768b949e8bf2f 410 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 374 389 1.4E-49 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YE0128 b39e391e126bc2a2687768b949e8bf2f 410 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 45 65 1.4E-49 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YE0128 b39e391e126bc2a2687768b949e8bf2f 410 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 278 299 1.4E-49 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YE0128 b39e391e126bc2a2687768b949e8bf2f 410 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 311 335 1.4E-49 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YE0128 b39e391e126bc2a2687768b949e8bf2f 410 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 389 409 1.4E-49 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YE0128 b39e391e126bc2a2687768b949e8bf2f 410 Gene3D G3DSA:2.40.50.100 37 67 6.8E-19 T 22-04-2016 YE0128 b39e391e126bc2a2687768b949e8bf2f 410 Gene3D G3DSA:2.40.50.100 263 298 6.8E-19 T 22-04-2016 YE0128 b39e391e126bc2a2687768b949e8bf2f 410 PANTHER PTHR30386:SF3 125 410 3.5E-151 T 22-04-2016 YE0128 b39e391e126bc2a2687768b949e8bf2f 410 PANTHER PTHR30386:SF3 1 88 3.5E-151 T 22-04-2016 YE0128 b39e391e126bc2a2687768b949e8bf2f 410 Pfam PF13533 Biotin-lipoyl like 37 78 1.6E-8 T 22-04-2016 YE0128 b39e391e126bc2a2687768b949e8bf2f 410 SUPERFAMILY SSF111369 227 309 2.88E-5 T 22-04-2016 YE0128 b39e391e126bc2a2687768b949e8bf2f 410 PANTHER PTHR30386 1 88 3.5E-151 T 22-04-2016 YE0128 b39e391e126bc2a2687768b949e8bf2f 410 PANTHER PTHR30386 125 410 3.5E-151 T 22-04-2016 YE0128 b39e391e126bc2a2687768b949e8bf2f 410 Pfam PF13437 HlyD family secretion protein 266 377 3.9E-12 T 22-04-2016 YE0834 60e3af776163a17370d631ffa04ca1ca 875 PANTHER PTHR11777:SF9 1 875 0.0 T 22-04-2016 YE0834 60e3af776163a17370d631ffa04ca1ca 875 SUPERFAMILY SSF55681 4 255 7.21E-108 T 22-04-2016 YE0834 60e3af776163a17370d631ffa04ca1ca 875 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 653 696 9.0E-17 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 YE0834 60e3af776163a17370d631ffa04ca1ca 875 SUPERFAMILY SSF50447 456 552 4.94E-18 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain YE0834 60e3af776163a17370d631ffa04ca1ca 875 SUPERFAMILY SSF101353 256 464 1.7E-61 T 22-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 YE0834 60e3af776163a17370d631ffa04ca1ca 875 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 854 0.0 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 YE0834 60e3af776163a17370d631ffa04ca1ca 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 209 220 2.1E-33 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 YE0834 60e3af776163a17370d631ffa04ca1ca 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 282 298 2.1E-33 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 YE0834 60e3af776163a17370d631ffa04ca1ca 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 2.1E-33 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 YE0834 60e3af776163a17370d631ffa04ca1ca 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 236 249 2.1E-33 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 YE0834 60e3af776163a17370d631ffa04ca1ca 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 306 319 2.1E-33 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 YE0834 60e3af776163a17370d631ffa04ca1ca 875 SUPERFAMILY SSF55186 552 711 9.42E-53 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 YE0834 60e3af776163a17370d631ffa04ca1ca 875 Gene3D G3DSA:3.30.930.10 4 251 6.1E-125 T 22-04-2016 YE0834 60e3af776163a17370d631ffa04ca1ca 875 Pfam PF02272 DHHA1 domain 800 868 1.1E-15 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 YE0834 60e3af776163a17370d631ffa04ca1ca 875 SMART SM00863 653 696 2.5E-20 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 YE0834 60e3af776163a17370d631ffa04ca1ca 875 PANTHER PTHR11777 1 875 0.0 T 22-04-2016 YE0834 60e3af776163a17370d631ffa04ca1ca 875 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 875 205.918 T 22-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 YE0834 60e3af776163a17370d631ffa04ca1ca 875 Pfam PF01411 tRNA synthetases class II (A) 7 554 5.7E-234 T 22-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 YE3054 bdf2d24ea28129739e75a0964e3d4d52 228 PANTHER PTHR24220:SF509 8 227 7.4E-113 T 22-04-2016 YE3054 bdf2d24ea28129739e75a0964e3d4d52 228 Pfam PF00005 ABC transporter 27 174 3.6E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE3054 bdf2d24ea28129739e75a0964e3d4d52 228 SMART SM00382 35 223 1.2E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YE3054 bdf2d24ea28129739e75a0964e3d4d52 228 Gene3D G3DSA:3.40.50.300 5 227 7.7E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3054 bdf2d24ea28129739e75a0964e3d4d52 228 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE3054 bdf2d24ea28129739e75a0964e3d4d52 228 SUPERFAMILY SSF52540 6 227 1.82E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3054 bdf2d24ea28129739e75a0964e3d4d52 228 PANTHER PTHR24220 8 227 7.4E-113 T 22-04-2016 YE2104 6217da43a2669ec46766e5370894b75e 633 SUPERFAMILY SSF55604 8 81 1.2E-21 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YE2104 6217da43a2669ec46766e5370894b75e 633 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 20 37 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 YE2104 6217da43a2669ec46766e5370894b75e 633 PANTHER PTHR30175 473 579 5.6E-214 T 22-04-2016 YE2104 6217da43a2669ec46766e5370894b75e 633 PANTHER PTHR30175 4 457 5.6E-214 T 22-04-2016 YE2104 6217da43a2669ec46766e5370894b75e 633 Gene3D G3DSA:3.30.1360.60 4 80 1.2E-26 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YE2104 6217da43a2669ec46766e5370894b75e 633 TIGRFAM TIGR01995 PTS-II-ABC-beta: PTS system, beta-glucoside-specific IIABC component 4 628 5.7E-210 T 22-04-2016 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component GO:0005886|GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YE2104 6217da43a2669ec46766e5370894b75e 633 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 485 604 3.9E-43 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YE2104 6217da43a2669ec46766e5370894b75e 633 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 546 558 - T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YE2104 6217da43a2669ec46766e5370894b75e 633 Pfam PF00367 phosphotransferase system, EIIB 10 42 1.4E-16 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 YE2104 6217da43a2669ec46766e5370894b75e 633 SUPERFAMILY SSF51261 478 627 7.32E-53 T 22-04-2016 IPR011055 Duplicated hybrid motif YE2104 6217da43a2669ec46766e5370894b75e 633 Pfam PF02378 Phosphotransferase system, EIIC 112 393 1.1E-29 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 YE2104 6217da43a2669ec46766e5370894b75e 633 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 484 608 5.0E-47 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YE2104 6217da43a2669ec46766e5370894b75e 633 PANTHER PTHR30175:SF1 473 579 5.6E-214 T 22-04-2016 YE2104 6217da43a2669ec46766e5370894b75e 633 PANTHER PTHR30175:SF1 4 457 5.6E-214 T 22-04-2016 YE2104 6217da43a2669ec46766e5370894b75e 633 Gene3D G3DSA:2.70.70.10 481 628 3.4E-56 T 22-04-2016 YE1913 eb980621f976edee71733663301ce812 183 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 15 84 1.6E-31 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 YE1913 eb980621f976edee71733663301ce812 183 ProSitePatterns PS00938 Initiation factor 3 signature. 66 79 - T 22-04-2016 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 YE1913 eb980621f976edee71733663301ce812 183 Gene3D G3DSA:3.30.110.10 87 182 2.7E-38 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 YE1913 eb980621f976edee71733663301ce812 183 PANTHER PTHR10938 10 183 2.8E-69 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 YE1913 eb980621f976edee71733663301ce812 183 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 91 180 1.1E-35 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 YE1913 eb980621f976edee71733663301ce812 183 SUPERFAMILY SSF54364 13 86 4.05E-29 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 YE1913 eb980621f976edee71733663301ce812 183 Gene3D G3DSA:3.10.20.80 13 86 1.2E-35 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 YE1913 eb980621f976edee71733663301ce812 183 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 15 182 5.0E-74 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 YE1913 eb980621f976edee71733663301ce812 183 SUPERFAMILY SSF55200 90 182 2.09E-32 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 YE1913 eb980621f976edee71733663301ce812 183 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 9 182 30.506 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 YE1081 48dfa137fe5e29459efc08f82cbe64a1 487 Gene3D G3DSA:3.20.20.70 2 485 7.0E-191 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YE1081 48dfa137fe5e29459efc08f82cbe64a1 487 Pfam PF00571 CBS domain 95 140 1.0E-7 T 22-04-2016 IPR000644 CBS domain YE1081 48dfa137fe5e29459efc08f82cbe64a1 487 Pfam PF00571 CBS domain 149 202 1.4E-4 T 22-04-2016 IPR000644 CBS domain YE1081 48dfa137fe5e29459efc08f82cbe64a1 487 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 454 9.9E-195 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 YE1081 48dfa137fe5e29459efc08f82cbe64a1 487 PIRSF PIRSF000130 1 487 9.4E-195 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 YE1081 48dfa137fe5e29459efc08f82cbe64a1 487 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 473 2.2E-159 T 22-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 YE1081 48dfa137fe5e29459efc08f82cbe64a1 487 SUPERFAMILY SSF51412 217 477 1.16E-123 T 22-04-2016 YE1081 48dfa137fe5e29459efc08f82cbe64a1 487 SUPERFAMILY SSF51412 1 90 1.16E-123 T 22-04-2016 YE1081 48dfa137fe5e29459efc08f82cbe64a1 487 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 486 83.782 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 YE1081 48dfa137fe5e29459efc08f82cbe64a1 487 PANTHER PTHR11911 1 281 3.2E-245 T 22-04-2016 YE1081 48dfa137fe5e29459efc08f82cbe64a1 487 PANTHER PTHR11911 299 486 3.2E-245 T 22-04-2016 YE1081 48dfa137fe5e29459efc08f82cbe64a1 487 SUPERFAMILY SSF54631 95 203 1.15E-24 T 22-04-2016 YE1081 48dfa137fe5e29459efc08f82cbe64a1 487 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 22-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 YE1081 48dfa137fe5e29459efc08f82cbe64a1 487 PANTHER PTHR11911:SF6 1 281 3.2E-245 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 YE1081 48dfa137fe5e29459efc08f82cbe64a1 487 PANTHER PTHR11911:SF6 299 486 3.2E-245 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 YE1081 48dfa137fe5e29459efc08f82cbe64a1 487 SMART SM00116 158 206 4.5E-8 T 22-04-2016 IPR000644 CBS domain YE1081 48dfa137fe5e29459efc08f82cbe64a1 487 SMART SM00116 96 144 7.2E-9 T 22-04-2016 IPR000644 CBS domain YE1081 48dfa137fe5e29459efc08f82cbe64a1 487 SMART SM01240 7 473 0.0 T 22-04-2016 YE3824 21bc541fc6d402d7355074c49dc19b3c 397 PANTHER PTHR35404 3 397 9.2E-69 T 22-04-2016 YE3824 21bc541fc6d402d7355074c49dc19b3c 397 Pfam PF01609 Transposase DDE domain 107 310 4.0E-19 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 YE3824 21bc541fc6d402d7355074c49dc19b3c 397 SUPERFAMILY SSF53098 15 371 2.73E-34 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE2852 a0606590b4de8c2956d0a8eff9a3e269 620 Gene3D G3DSA:3.40.390.10 284 378 6.5E-8 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 YE2852 a0606590b4de8c2956d0a8eff9a3e269 620 PANTHER PTHR11804 132 584 5.6E-94 T 22-04-2016 YE2852 a0606590b4de8c2956d0a8eff9a3e269 620 PANTHER PTHR11804:SF8 132 584 5.6E-94 T 22-04-2016 YE2852 a0606590b4de8c2956d0a8eff9a3e269 620 Pfam PF01432 Peptidase family M3 171 549 1.3E-19 T 22-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 YE2852 a0606590b4de8c2956d0a8eff9a3e269 620 Gene3D G3DSA:1.10.1370.10 151 264 2.3E-28 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 YE2852 a0606590b4de8c2956d0a8eff9a3e269 620 Gene3D G3DSA:1.10.1370.10 379 554 2.3E-28 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 YE2852 a0606590b4de8c2956d0a8eff9a3e269 620 SUPERFAMILY SSF55486 5 553 5.49E-71 T 22-04-2016 YE1731 06f699ea44250b6b5b854525460e57bb 519 SUPERFAMILY SSF58104 242 515 1.44E-65 T 22-04-2016 YE1731 06f699ea44250b6b5b854525460e57bb 519 PANTHER PTHR32089 190 519 5.0E-133 T 22-04-2016 YE1731 06f699ea44250b6b5b854525460e57bb 519 PANTHER PTHR32089 51 170 5.0E-133 T 22-04-2016 YE1731 06f699ea44250b6b5b854525460e57bb 519 SMART SM00283 269 516 2.8E-76 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 YE1731 06f699ea44250b6b5b854525460e57bb 519 Gene3D G3DSA:3.30.450.20 23 114 1.4E-21 T 22-04-2016 YE1731 06f699ea44250b6b5b854525460e57bb 519 SUPERFAMILY SSF55785 23 114 1.74E-24 T 22-04-2016 IPR000014 PAS domain YE1731 06f699ea44250b6b5b854525460e57bb 519 SMART SM00086 80 121 0.0021 T 22-04-2016 IPR001610 PAC motif YE1731 06f699ea44250b6b5b854525460e57bb 519 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 330 513 3.8E-54 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 YE1731 06f699ea44250b6b5b854525460e57bb 519 Gene3D G3DSA:1.10.287.950 284 488 1.1E-55 T 22-04-2016 YE1731 06f699ea44250b6b5b854525460e57bb 519 Pfam PF00672 HAMP domain 197 264 4.5E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YE1731 06f699ea44250b6b5b854525460e57bb 519 PANTHER PTHR32089:SF64 190 519 5.0E-133 T 22-04-2016 YE1731 06f699ea44250b6b5b854525460e57bb 519 PANTHER PTHR32089:SF64 51 170 5.0E-133 T 22-04-2016 YE1731 06f699ea44250b6b5b854525460e57bb 519 Pfam PF08447 PAS fold 31 114 3.9E-13 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 YE1731 06f699ea44250b6b5b854525460e57bb 519 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 3.1E-40 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE1731 06f699ea44250b6b5b854525460e57bb 519 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 394 3.1E-40 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE1731 06f699ea44250b6b5b854525460e57bb 519 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 3.1E-40 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE1731 06f699ea44250b6b5b854525460e57bb 519 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 3.1E-40 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE1731 06f699ea44250b6b5b854525460e57bb 519 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 23 114 2.6E-11 T 22-04-2016 IPR000014 PAS domain YE1626 797d10f74370e6c61000895e5ae0465d 95 PANTHER PTHR33336:SF5 1 93 9.1E-25 T 22-04-2016 YE1626 797d10f74370e6c61000895e5ae0465d 95 Gene3D G3DSA:3.30.70.900 3 94 8.2E-32 T 22-04-2016 YE1626 797d10f74370e6c61000895e5ae0465d 95 SUPERFAMILY SSF54909 3 89 1.72E-28 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel YE1626 797d10f74370e6c61000895e5ae0465d 95 PANTHER PTHR33336 1 93 9.1E-25 T 22-04-2016 YE1626 797d10f74370e6c61000895e5ae0465d 95 Pfam PF03992 Antibiotic biosynthesis monooxygenase 3 77 9.0E-19 T 22-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain YE2577 4a476cda63f5defb112c438649f2e35d 684 Gene3D G3DSA:2.30.30.40 536 557 1.3E-24 T 22-04-2016 YE2577 4a476cda63f5defb112c438649f2e35d 684 Gene3D G3DSA:2.30.30.40 624 667 1.3E-24 T 22-04-2016 YE2577 4a476cda63f5defb112c438649f2e35d 684 SUPERFAMILY SSF55874 354 534 1.96E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE2577 4a476cda63f5defb112c438649f2e35d 684 SMART SM00073 5 102 4.2E-29 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YE2577 4a476cda63f5defb112c438649f2e35d 684 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 490 5.5E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE2577 4a476cda63f5defb112c438649f2e35d 684 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 455 5.5E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE2577 4a476cda63f5defb112c438649f2e35d 684 PRINTS PR00344 Bacterial sensor protein C-terminal signature 520 533 5.5E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE2577 4a476cda63f5defb112c438649f2e35d 684 PRINTS PR00344 Bacterial sensor protein C-terminal signature 496 514 5.5E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE2577 4a476cda63f5defb112c438649f2e35d 684 Gene3D G3DSA:2.40.50.180 560 623 3.2E-13 T 22-04-2016 YE2577 4a476cda63f5defb112c438649f2e35d 684 SUPERFAMILY SSF47384 289 352 4.32E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE2577 4a476cda63f5defb112c438649f2e35d 684 Pfam PF09078 CheY binding 167 229 3.2E-25 T 22-04-2016 IPR015162 CheY binding YE2577 4a476cda63f5defb112c438649f2e35d 684 SMART SM00260 528 668 7.3E-42 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 YE2577 4a476cda63f5defb112c438649f2e35d 684 Gene3D G3DSA:3.30.565.10 353 535 3.1E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE2577 4a476cda63f5defb112c438649f2e35d 684 PANTHER PTHR22617 1 683 0.0 T 22-04-2016 YE2577 4a476cda63f5defb112c438649f2e35d 684 Gene3D G3DSA:1.10.287.560 289 352 8.9E-23 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 YE2577 4a476cda63f5defb112c438649f2e35d 684 Gene3D G3DSA:3.30.70.400 163 231 2.8E-31 T 22-04-2016 IPR015162 CheY binding YE2577 4a476cda63f5defb112c438649f2e35d 684 SUPERFAMILY SSF47226 7 126 4.71E-29 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YE2577 4a476cda63f5defb112c438649f2e35d 684 Gene3D G3DSA:1.20.120.160 3 137 1.9E-38 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YE2577 4a476cda63f5defb112c438649f2e35d 684 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 399 535 1.4E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE2577 4a476cda63f5defb112c438649f2e35d 684 SUPERFAMILY SSF50341 535 667 1.44E-30 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 YE2577 4a476cda63f5defb112c438649f2e35d 684 Pfam PF01584 CheW-like domain 541 667 2.3E-24 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 YE2577 4a476cda63f5defb112c438649f2e35d 684 SMART SM01231 288 351 2.7E-20 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 YE2577 4a476cda63f5defb112c438649f2e35d 684 PANTHER PTHR22617:SF20 1 683 0.0 T 22-04-2016 YE2577 4a476cda63f5defb112c438649f2e35d 684 SUPERFAMILY SSF55052 166 229 2.62E-20 T 22-04-2016 IPR015162 CheY binding YE2577 4a476cda63f5defb112c438649f2e35d 684 SMART SM00387 396 536 1.6E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE2577 4a476cda63f5defb112c438649f2e35d 684 Pfam PF01627 Hpt domain 9 104 5.0E-19 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YE2577 4a476cda63f5defb112c438649f2e35d 684 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 289 351 1.0E-16 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 YE3230 0b9d1613e58dfddd1a860326d65ff580 346 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 13 333 3.5E-125 T 22-04-2016 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 YE3230 0b9d1613e58dfddd1a860326d65ff580 346 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 3 345 35.795 T 22-04-2016 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 YE3230 0b9d1613e58dfddd1a860326d65ff580 346 SUPERFAMILY SSF100950 15 338 1.77E-106 T 22-04-2016 YE3230 0b9d1613e58dfddd1a860326d65ff580 346 Gene3D G3DSA:3.40.50.10470 152 338 1.7E-64 T 22-04-2016 YE3230 0b9d1613e58dfddd1a860326d65ff580 346 Gene3D G3DSA:1.20.120.420 12 151 8.7E-39 T 22-04-2016 IPR027363 Methylthioribose-1-phosphate isomerase-like, N-terminal domain KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 YE3230 0b9d1613e58dfddd1a860326d65ff580 346 PANTHER PTHR10233 18 334 3.2E-137 T 22-04-2016 YE3230 0b9d1613e58dfddd1a860326d65ff580 346 PANTHER PTHR10233:SF6 18 334 3.2E-137 T 22-04-2016 YE3230 0b9d1613e58dfddd1a860326d65ff580 346 Pfam PF01008 Initiation factor 2 subunit family 53 334 3.0E-66 T 22-04-2016 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 YE3230 0b9d1613e58dfddd1a860326d65ff580 346 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 40 334 5.9E-93 T 22-04-2016 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 YE3629 b8593ea59d891fc69bd6fc21579d686b 509 Pfam PF11604 Copper binding periplasmic protein CusF 431 495 6.0E-19 T 22-04-2016 IPR021647 Copper binding periplasmic protein CusF YE3629 b8593ea59d891fc69bd6fc21579d686b 509 SUPERFAMILY SSF111369 130 321 3.27E-14 T 22-04-2016 YE3629 b8593ea59d891fc69bd6fc21579d686b 509 PANTHER PTHR30097:SF3 46 411 1.4E-77 T 22-04-2016 YE3629 b8593ea59d891fc69bd6fc21579d686b 509 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 110 317 3.3E-65 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YE3629 b8593ea59d891fc69bd6fc21579d686b 509 Gene3D G3DSA:2.40.50.100 130 161 1.3E-8 T 22-04-2016 YE3629 b8593ea59d891fc69bd6fc21579d686b 509 Gene3D G3DSA:2.40.50.100 212 243 1.3E-8 T 22-04-2016 YE3629 b8593ea59d891fc69bd6fc21579d686b 509 PANTHER PTHR30097 46 411 1.4E-77 T 22-04-2016 YE3629 b8593ea59d891fc69bd6fc21579d686b 509 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 210 393 7.9E-37 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 YE3240 68e8fd83f65d0f04e5ea295b1dd5a4ee 170 SMART SM00347 46 148 2.6E-31 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YE3240 68e8fd83f65d0f04e5ea295b1dd5a4ee 170 PANTHER PTHR18964 44 170 8.3E-48 T 22-04-2016 YE3240 68e8fd83f65d0f04e5ea295b1dd5a4ee 170 Gene3D G3DSA:1.10.10.10 15 166 1.0E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3240 68e8fd83f65d0f04e5ea295b1dd5a4ee 170 PANTHER PTHR18964:SF141 44 170 8.3E-48 T 22-04-2016 YE3240 68e8fd83f65d0f04e5ea295b1dd5a4ee 170 ProSitePatterns PS01117 MarR-type HTH domain signature. 87 121 - T 22-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site YE3240 68e8fd83f65d0f04e5ea295b1dd5a4ee 170 Pfam PF01047 MarR family 53 112 2.4E-16 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YE3240 68e8fd83f65d0f04e5ea295b1dd5a4ee 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 88 2.4E-22 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YE3240 68e8fd83f65d0f04e5ea295b1dd5a4ee 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 138 158 2.4E-22 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YE3240 68e8fd83f65d0f04e5ea295b1dd5a4ee 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 108 124 2.4E-22 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YE3240 68e8fd83f65d0f04e5ea295b1dd5a4ee 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 104 2.4E-22 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YE3240 68e8fd83f65d0f04e5ea295b1dd5a4ee 170 SUPERFAMILY SSF46785 21 165 9.67E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2174 4418da3d598ac111ba7df3fafb28e682 1018 PANTHER PTHR11748 249 588 1.0E-189 T 22-04-2016 YE2174 4418da3d598ac111ba7df3fafb28e682 1018 PANTHER PTHR11748 17 196 1.0E-189 T 22-04-2016 YE2174 4418da3d598ac111ba7df3fafb28e682 1018 Pfam PF13183 4Fe-4S dicluster domain 577 688 2.1E-12 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YE2174 4418da3d598ac111ba7df3fafb28e682 1018 Gene3D G3DSA:3.30.465.10 110 282 3.9E-41 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 YE2174 4418da3d598ac111ba7df3fafb28e682 1018 SUPERFAMILY SSF46548 656 691 1.96E-8 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 YE2174 4418da3d598ac111ba7df3fafb28e682 1018 SUPERFAMILY SSF46548 516 623 1.96E-8 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 YE2174 4418da3d598ac111ba7df3fafb28e682 1018 Gene3D G3DSA:3.30.43.10 2 109 4.0E-29 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 YE2174 4418da3d598ac111ba7df3fafb28e682 1018 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 674 685 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YE2174 4418da3d598ac111ba7df3fafb28e682 1018 Pfam PF02913 FAD linked oxidases, C-terminal domain 281 539 1.8E-63 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 YE2174 4418da3d598ac111ba7df3fafb28e682 1018 Pfam PF01565 FAD binding domain 52 192 8.9E-36 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 YE2174 4418da3d598ac111ba7df3fafb28e682 1018 SUPERFAMILY SSF55103 258 542 9.65E-53 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 YE2174 4418da3d598ac111ba7df3fafb28e682 1018 SUPERFAMILY SSF56176 18 282 1.23E-52 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 YE2174 4418da3d598ac111ba7df3fafb28e682 1018 Gene3D G3DSA:1.10.1060.10 517 620 9.8E-16 T 22-04-2016 YE2174 4418da3d598ac111ba7df3fafb28e682 1018 Gene3D G3DSA:1.10.1060.10 655 705 9.8E-16 T 22-04-2016 YE2174 4418da3d598ac111ba7df3fafb28e682 1018 PANTHER PTHR11748:SF35 249 588 1.0E-189 T 22-04-2016 YE2174 4418da3d598ac111ba7df3fafb28e682 1018 PANTHER PTHR11748:SF35 17 196 1.0E-189 T 22-04-2016 YE3848 604fc5506072541661880226aadbb73f 359 SUPERFAMILY SSF50621 227 358 3.84E-43 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 YE3848 604fc5506072541661880226aadbb73f 359 PANTHER PTHR30511 1 359 2.7E-240 T 22-04-2016 YE3848 604fc5506072541661880226aadbb73f 359 SUPERFAMILY SSF51419 8 234 1.96E-71 T 22-04-2016 IPR029066 PLP-binding barrel YE3848 604fc5506072541661880226aadbb73f 359 Gene3D G3DSA:3.20.20.10 11 211 5.2E-74 T 22-04-2016 IPR029066 PLP-binding barrel YE3848 604fc5506072541661880226aadbb73f 359 SMART SM01005 233 357 5.7E-59 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YE3848 604fc5506072541661880226aadbb73f 359 Pfam PF01168 Alanine racemase, N-terminal domain 8 219 2.5E-71 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YE3848 604fc5506072541661880226aadbb73f 359 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 31 41 - T 22-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YE3848 604fc5506072541661880226aadbb73f 359 Pfam PF00842 Alanine racemase, C-terminal domain 233 356 1.7E-35 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YE3848 604fc5506072541661880226aadbb73f 359 Gene3D G3DSA:2.40.37.10 212 358 5.6E-53 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 YE3848 604fc5506072541661880226aadbb73f 359 TIGRFAM TIGR00492 alr: alanine racemase 3 357 7.6E-137 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YE3848 604fc5506072541661880226aadbb73f 359 PRINTS PR00992 Alanine racemase signature 192 219 1.0E-70 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YE3848 604fc5506072541661880226aadbb73f 359 PRINTS PR00992 Alanine racemase signature 266 281 1.0E-70 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YE3848 604fc5506072541661880226aadbb73f 359 PRINTS PR00992 Alanine racemase signature 249 264 1.0E-70 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YE3848 604fc5506072541661880226aadbb73f 359 PRINTS PR00992 Alanine racemase signature 120 132 1.0E-70 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YE3848 604fc5506072541661880226aadbb73f 359 PRINTS PR00992 Alanine racemase signature 339 352 1.0E-70 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YE3848 604fc5506072541661880226aadbb73f 359 PRINTS PR00992 Alanine racemase signature 60 78 1.0E-70 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YE3848 604fc5506072541661880226aadbb73f 359 PRINTS PR00992 Alanine racemase signature 287 304 1.0E-70 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YE3848 604fc5506072541661880226aadbb73f 359 PRINTS PR00992 Alanine racemase signature 155 166 1.0E-70 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YE3848 604fc5506072541661880226aadbb73f 359 PRINTS PR00992 Alanine racemase signature 26 42 1.0E-70 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YE3848 604fc5506072541661880226aadbb73f 359 Hamap MF_01201 Alanine racemase. 1 357 34.36 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YE3848 604fc5506072541661880226aadbb73f 359 PANTHER PTHR30511:SF4 1 359 2.7E-240 T 22-04-2016 YE2505 2dcb7960b6d854c06ca675b8769eadaf 558 SUPERFAMILY SSF55890 339 417 8.89E-16 T 22-04-2016 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 YE2505 2dcb7960b6d854c06ca675b8769eadaf 558 SUPERFAMILY SSF55874 407 534 6.81E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE2505 2dcb7960b6d854c06ca675b8769eadaf 558 SUPERFAMILY SSF55785 220 321 5.14E-6 T 22-04-2016 IPR000014 PAS domain YE2505 2dcb7960b6d854c06ca675b8769eadaf 558 PANTHER PTHR24423 199 540 2.2E-164 T 22-04-2016 YE2505 2dcb7960b6d854c06ca675b8769eadaf 558 PANTHER PTHR24423 20 166 2.2E-164 T 22-04-2016 YE2505 2dcb7960b6d854c06ca675b8769eadaf 558 Pfam PF00989 PAS fold 222 322 3.0E-8 T 22-04-2016 IPR013767 PAS fold GO:0006355 YE2505 2dcb7960b6d854c06ca675b8769eadaf 558 SUPERFAMILY SSF103190 46 177 1.84E-37 T 22-04-2016 IPR029151 Periplasmic sensor domain-like YE2505 2dcb7960b6d854c06ca675b8769eadaf 558 Pfam PF17203 Single cache domain 3 43 178 4.0E-21 T 22-04-2016 IPR033463 Single cache domain 3 YE2505 2dcb7960b6d854c06ca675b8769eadaf 558 Gene3D G3DSA:1.10.287.130 328 386 6.0E-25 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE2505 2dcb7960b6d854c06ca675b8769eadaf 558 PRINTS PR00344 Bacterial sensor protein C-terminal signature 486 496 6.0E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE2505 2dcb7960b6d854c06ca675b8769eadaf 558 PRINTS PR00344 Bacterial sensor protein C-terminal signature 468 482 6.0E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE2505 2dcb7960b6d854c06ca675b8769eadaf 558 PRINTS PR00344 Bacterial sensor protein C-terminal signature 497 515 6.0E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE2505 2dcb7960b6d854c06ca675b8769eadaf 558 PRINTS PR00344 Bacterial sensor protein C-terminal signature 521 534 6.0E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE2505 2dcb7960b6d854c06ca675b8769eadaf 558 PANTHER PTHR24423:SF375 199 540 2.2E-164 T 22-04-2016 YE2505 2dcb7960b6d854c06ca675b8769eadaf 558 PANTHER PTHR24423:SF375 20 166 2.2E-164 T 22-04-2016 YE2505 2dcb7960b6d854c06ca675b8769eadaf 558 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 433 536 3.9E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE2505 2dcb7960b6d854c06ca675b8769eadaf 558 Gene3D G3DSA:3.30.450.20 221 327 1.3E-9 T 22-04-2016 YE2505 2dcb7960b6d854c06ca675b8769eadaf 558 SMART SM00387 429 537 6.2E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE2505 2dcb7960b6d854c06ca675b8769eadaf 558 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 330 388 1.9E-13 T 22-04-2016 YE2505 2dcb7960b6d854c06ca675b8769eadaf 558 Gene3D G3DSA:3.30.565.10 406 535 5.9E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE2505 2dcb7960b6d854c06ca675b8769eadaf 558 Gene3D G3DSA:3.30.450.20 39 178 1.3E-47 T 22-04-2016 YE1619 4b3dee57618a3e0b82806afa8d3c782e 350 SMART SM00450 136 237 3.2E-26 T 22-04-2016 IPR001763 Rhodanese-like domain YE1619 4b3dee57618a3e0b82806afa8d3c782e 350 Pfam PF12368 Rhodanase C-terminal 246 308 1.3E-19 T 22-04-2016 IPR022111 Rhodanase, C-terminal YE1619 4b3dee57618a3e0b82806afa8d3c782e 350 PANTHER PTHR22778:SF21 1 322 8.6E-117 T 22-04-2016 YE1619 4b3dee57618a3e0b82806afa8d3c782e 350 PANTHER PTHR22778 1 322 8.6E-117 T 22-04-2016 YE1619 4b3dee57618a3e0b82806afa8d3c782e 350 Pfam PF00581 Rhodanese-like domain 138 233 5.7E-15 T 22-04-2016 IPR001763 Rhodanese-like domain YE1619 4b3dee57618a3e0b82806afa8d3c782e 350 SUPERFAMILY SSF52821 117 270 3.67E-31 T 22-04-2016 IPR001763 Rhodanese-like domain YE1619 4b3dee57618a3e0b82806afa8d3c782e 350 Hamap MF_00469 UPF0176 protein YceA [yceA]. 22 277 38.666 T 22-04-2016 IPR020936 Uncharacterised protein family UPF0176 YE1619 4b3dee57618a3e0b82806afa8d3c782e 350 Gene3D G3DSA:3.40.250.10 117 242 3.5E-37 T 22-04-2016 IPR001763 Rhodanese-like domain YE1323 a55a960625c07f194e6cae8a268affe0 302 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 293 5.9E-112 T 22-04-2016 IPR010099 Epimerase family protein SDR39U1 YE1323 a55a960625c07f194e6cae8a268affe0 302 PANTHER PTHR11092:SF0 1 302 2.5E-149 T 22-04-2016 YE1323 a55a960625c07f194e6cae8a268affe0 302 SUPERFAMILY SSF51735 1 297 7.54E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain YE1323 a55a960625c07f194e6cae8a268affe0 302 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 214 4.0E-19 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 YE1323 a55a960625c07f194e6cae8a268affe0 302 PANTHER PTHR11092 1 302 2.5E-149 T 22-04-2016 IPR010099 Epimerase family protein SDR39U1 YE1323 a55a960625c07f194e6cae8a268affe0 302 Gene3D G3DSA:3.40.50.720 1 249 6.8E-26 T 22-04-2016 IPR016040 NAD(P)-binding domain YE1323 a55a960625c07f194e6cae8a268affe0 302 Pfam PF08338 Domain of unknown function (DUF1731) 250 295 7.2E-20 T 22-04-2016 IPR013549 Domain of unknown function DUF1731 YE2638 74bbdc08afccfac4d94aad61e7bf78db 143 PANTHER PTHR30181:SF2 2 117 8.8E-18 T 22-04-2016 YE2638 74bbdc08afccfac4d94aad61e7bf78db 143 SUPERFAMILY SSF55804 4 141 2.49E-27 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 YE2638 74bbdc08afccfac4d94aad61e7bf78db 143 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 142 3.1E-22 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YE2638 74bbdc08afccfac4d94aad61e7bf78db 143 Gene3D G3DSA:3.40.930.10 3 142 7.3E-28 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YE2638 74bbdc08afccfac4d94aad61e7bf78db 143 PANTHER PTHR30181 2 117 8.8E-18 T 22-04-2016 YE4094 86c9431923082e97025d3f23ec3733ee 507 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 1 501 43.699 T 22-04-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 YE4094 86c9431923082e97025d3f23ec3733ee 507 Gene3D G3DSA:1.10.275.10 2 194 2.1E-75 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal YE4094 86c9431923082e97025d3f23ec3733ee 507 PANTHER PTHR10362 3 491 3.2E-262 T 22-04-2016 YE4094 86c9431923082e97025d3f23ec3733ee 507 Gene3D G3DSA:1.20.200.10 195 500 6.9E-126 T 22-04-2016 YE4094 86c9431923082e97025d3f23ec3733ee 507 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 136 152 - T 22-04-2016 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 YE4094 86c9431923082e97025d3f23ec3733ee 507 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 1 504 4.1E-220 T 22-04-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 YE4094 86c9431923082e97025d3f23ec3733ee 507 Pfam PF00221 Aromatic amino acid lyase 8 466 1.1E-185 T 22-04-2016 IPR001106 Aromatic amino acid lyase YE4094 86c9431923082e97025d3f23ec3733ee 507 SUPERFAMILY SSF48557 2 505 2.2E-191 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 YE1349 d8e1e4679ca568021612a1fe220d934f 914 Gene3D G3DSA:2.20.25.90 228 275 3.9E-14 T 22-04-2016 YE1349 d8e1e4679ca568021612a1fe220d934f 914 Pfam PF01568 Molydopterin dinucleotide binding domain 832 896 3.8E-7 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 YE1349 d8e1e4679ca568021612a1fe220d934f 914 SUPERFAMILY SSF54862 82 213 7.11E-34 T 22-04-2016 YE1349 d8e1e4679ca568021612a1fe220d934f 914 SMART SM00926 221 275 2.4E-9 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 YE1349 d8e1e4679ca568021612a1fe220d934f 914 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 78 3.0E-11 T 22-04-2016 YE1349 d8e1e4679ca568021612a1fe220d934f 914 Gene3D G3DSA:3.40.50.740 504 692 5.5E-33 T 22-04-2016 YE1349 d8e1e4679ca568021612a1fe220d934f 914 Gene3D G3DSA:3.40.50.740 284 340 5.5E-33 T 22-04-2016 YE1349 d8e1e4679ca568021612a1fe220d934f 914 SUPERFAMILY SSF54292 1 77 9.86E-19 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YE1349 d8e1e4679ca568021612a1fe220d934f 914 SUPERFAMILY SSF50692 821 896 4.29E-13 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain YE1349 d8e1e4679ca568021612a1fe220d934f 914 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 103 115 - T 22-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 YE1349 d8e1e4679ca568021612a1fe220d934f 914 PANTHER PTHR11615:SF134 742 914 0.0 T 22-04-2016 YE1349 d8e1e4679ca568021612a1fe220d934f 914 PANTHER PTHR11615:SF134 496 686 0.0 T 22-04-2016 YE1349 d8e1e4679ca568021612a1fe220d934f 914 PANTHER PTHR11615:SF134 364 430 0.0 T 22-04-2016 YE1349 d8e1e4679ca568021612a1fe220d934f 914 PANTHER PTHR11615:SF134 3 320 0.0 T 22-04-2016 YE1349 d8e1e4679ca568021612a1fe220d934f 914 Pfam PF00384 Molybdopterin oxidoreductase 553 637 4.6E-7 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 YE1349 d8e1e4679ca568021612a1fe220d934f 914 Gene3D G3DSA:3.30.70.20 147 157 4.9E-5 T 22-04-2016 YE1349 d8e1e4679ca568021612a1fe220d934f 914 Gene3D G3DSA:3.30.70.20 198 227 4.9E-5 T 22-04-2016 YE1349 d8e1e4679ca568021612a1fe220d934f 914 SMART SM00929 88 128 1.9E-19 T 22-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 YE1349 d8e1e4679ca568021612a1fe220d934f 914 Gene3D G3DSA:3.10.20.30 3 79 6.1E-7 T 22-04-2016 IPR012675 Beta-grasp domain YE1349 d8e1e4679ca568021612a1fe220d934f 914 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 661 6.0E-203 T 22-04-2016 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 YE1349 d8e1e4679ca568021612a1fe220d934f 914 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 150 160 - T 22-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 YE1349 d8e1e4679ca568021612a1fe220d934f 914 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 22-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 YE1349 d8e1e4679ca568021612a1fe220d934f 914 Gene3D G3DSA:2.40.40.20 821 895 4.8E-11 T 22-04-2016 YE1349 d8e1e4679ca568021612a1fe220d934f 914 PANTHER PTHR11615 742 914 0.0 T 22-04-2016 YE1349 d8e1e4679ca568021612a1fe220d934f 914 PANTHER PTHR11615 496 686 0.0 T 22-04-2016 YE1349 d8e1e4679ca568021612a1fe220d934f 914 PANTHER PTHR11615 364 430 0.0 T 22-04-2016 YE1349 d8e1e4679ca568021612a1fe220d934f 914 PANTHER PTHR11615 3 320 0.0 T 22-04-2016 YE1349 d8e1e4679ca568021612a1fe220d934f 914 SUPERFAMILY SSF53706 219 693 3.04E-79 T 22-04-2016 YE1349 d8e1e4679ca568021612a1fe220d934f 914 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 88 124 8.4E-15 T 22-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 YE1349 d8e1e4679ca568021612a1fe220d934f 914 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 221 274 6.2E-10 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 YEP0033 2809620079877feacee52c9c79d2627d 131 ProSitePatterns PS00194 Thioredoxin family active site. 16 34 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 YEP0033 2809620079877feacee52c9c79d2627d 131 Pfam PF01323 DSBA-like thioredoxin domain 15 130 4.5E-18 T 22-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 YEP0033 2809620079877feacee52c9c79d2627d 131 PANTHER PTHR35891 1 131 3.6E-65 T 22-04-2016 YEP0033 2809620079877feacee52c9c79d2627d 131 Gene3D G3DSA:3.40.30.10 1 130 2.1E-43 T 22-04-2016 IPR012336 Thioredoxin-like fold YEP0033 2809620079877feacee52c9c79d2627d 131 PANTHER PTHR35891:SF2 1 131 3.6E-65 T 22-04-2016 YEP0033 2809620079877feacee52c9c79d2627d 131 SUPERFAMILY SSF52833 2 130 2.4E-31 T 22-04-2016 IPR012336 Thioredoxin-like fold YE2708 ab3e370d54838c59b9f845efd3b44220 210 PIRSF PIRSF000709 2 193 2.3E-6 T 22-04-2016 YE2708 ab3e370d54838c59b9f845efd3b44220 210 PANTHER PTHR23029 1 206 8.6E-44 T 22-04-2016 YE2708 ab3e370d54838c59b9f845efd3b44220 210 PANTHER PTHR23029:SF1 1 206 8.6E-44 T 22-04-2016 YE2708 ab3e370d54838c59b9f845efd3b44220 210 SMART SM00855 2 167 7.3E-20 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 YE2708 ab3e370d54838c59b9f845efd3b44220 210 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 5 14 - T 22-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 YE2708 ab3e370d54838c59b9f845efd3b44220 210 SUPERFAMILY SSF53254 1 207 7.66E-53 T 22-04-2016 IPR029033 Histidine phosphatase superfamily YE2708 ab3e370d54838c59b9f845efd3b44220 210 Gene3D G3DSA:3.40.50.1240 1 207 3.6E-54 T 22-04-2016 IPR029033 Histidine phosphatase superfamily YE2708 ab3e370d54838c59b9f845efd3b44220 210 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 205 2.2E-50 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 YE0373 2b30ee6057cd37bac1f272d25d140649 156 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 140 3.5E-51 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 YE0373 2b30ee6057cd37bac1f272d25d140649 156 PANTHER PTHR33540 1 156 1.4E-53 T 22-04-2016 YE0373 2b30ee6057cd37bac1f272d25d140649 156 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 131 3.7E-40 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 YE0373 2b30ee6057cd37bac1f272d25d140649 156 SUPERFAMILY SSF52540 26 129 4.32E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0373 2b30ee6057cd37bac1f272d25d140649 156 Gene3D G3DSA:3.40.50.300 3 151 1.1E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2060 2184ea2fba7d29537e23e931d8e9148d 560 Gene3D G3DSA:3.40.50.970 6 181 1.3E-73 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE2060 2184ea2fba7d29537e23e931d8e9148d 560 SUPERFAMILY SSF52518 5 181 3.62E-59 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE2060 2184ea2fba7d29537e23e931d8e9148d 560 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 387 535 4.6E-48 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 YE2060 2184ea2fba7d29537e23e931d8e9148d 560 PANTHER PTHR18968 1 560 0.0 T 22-04-2016 YE2060 2184ea2fba7d29537e23e931d8e9148d 560 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 197 331 2.0E-42 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 YE2060 2184ea2fba7d29537e23e931d8e9148d 560 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 424 443 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 YE2060 2184ea2fba7d29537e23e931d8e9148d 560 PANTHER PTHR18968:SF128 1 560 0.0 T 22-04-2016 YE2060 2184ea2fba7d29537e23e931d8e9148d 560 SUPERFAMILY SSF52518 362 557 7.98E-66 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE2060 2184ea2fba7d29537e23e931d8e9148d 560 Gene3D G3DSA:3.40.50.1220 193 356 8.1E-58 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain YE2060 2184ea2fba7d29537e23e931d8e9148d 560 Gene3D G3DSA:3.40.50.970 359 557 5.2E-70 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE2060 2184ea2fba7d29537e23e931d8e9148d 560 SUPERFAMILY SSF52467 195 355 1.81E-54 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain YE2060 2184ea2fba7d29537e23e931d8e9148d 560 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 176 2.6E-58 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 YE2060 2184ea2fba7d29537e23e931d8e9148d 560 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 9 558 2.8E-197 T 22-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YE3025 029fbbd7ea773c31ff97619d205cd63a 491 SUPERFAMILY SSF47384 221 304 2.75E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE3025 029fbbd7ea773c31ff97619d205cd63a 491 PANTHER PTHR24423 178 449 1.1E-72 T 22-04-2016 YE3025 029fbbd7ea773c31ff97619d205cd63a 491 SMART SM00387 347 458 5.6E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE3025 029fbbd7ea773c31ff97619d205cd63a 491 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 348 450 5.0E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE3025 029fbbd7ea773c31ff97619d205cd63a 491 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 3 454 1.1E-119 T 22-04-2016 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 YE3025 029fbbd7ea773c31ff97619d205cd63a 491 SMART SM00304 184 237 0.0023 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YE3025 029fbbd7ea773c31ff97619d205cd63a 491 Gene3D G3DSA:1.10.287.130 230 299 1.3E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE3025 029fbbd7ea773c31ff97619d205cd63a 491 Pfam PF00512 His Kinase A (phospho-acceptor) domain 239 303 1.7E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE3025 029fbbd7ea773c31ff97619d205cd63a 491 SMART SM00388 238 304 3.2E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE3025 029fbbd7ea773c31ff97619d205cd63a 491 Pfam PF00672 HAMP domain 164 231 8.4E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YE3025 029fbbd7ea773c31ff97619d205cd63a 491 PANTHER PTHR24423:SF354 178 449 1.1E-72 T 22-04-2016 YE3025 029fbbd7ea773c31ff97619d205cd63a 491 SUPERFAMILY SSF55874 293 449 2.88E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE3025 029fbbd7ea773c31ff97619d205cd63a 491 Gene3D G3DSA:3.30.565.10 309 456 8.5E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE4178 747a4da47387341c2fd132b132a17354 454 Gene3D G3DSA:3.40.50.300 211 246 6.7E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE4178 747a4da47387341c2fd132b132a17354 454 PANTHER PTHR11649 8 454 6.3E-176 T 22-04-2016 YE4178 747a4da47387341c2fd132b132a17354 454 PANTHER PTHR11649:SF56 8 454 6.3E-176 T 22-04-2016 YE4178 747a4da47387341c2fd132b132a17354 454 Pfam PF01926 50S ribosome-binding GTPase 218 310 1.9E-24 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YE4178 747a4da47387341c2fd132b132a17354 454 Gene3D G3DSA:1.20.120.430 384 454 1.3E-59 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 YE4178 747a4da47387341c2fd132b132a17354 454 Gene3D G3DSA:1.20.120.430 122 182 1.3E-59 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 YE4178 747a4da47387341c2fd132b132a17354 454 Gene3D G3DSA:1.20.120.430 247 271 1.3E-59 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 YE4178 747a4da47387341c2fd132b132a17354 454 Gene3D G3DSA:3.30.1360.120 1 121 7.9E-42 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 YE4178 747a4da47387341c2fd132b132a17354 454 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 216 370 1.2E-22 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 YE4178 747a4da47387341c2fd132b132a17354 454 Pfam PF10396 GTP-binding protein TrmE N-terminus 6 120 3.4E-34 T 22-04-2016 IPR018948 GTP-binding protein TrmE, N-terminal YE4178 747a4da47387341c2fd132b132a17354 454 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 5 454 33.203 T 22-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 YE4178 747a4da47387341c2fd132b132a17354 454 Pfam PF12631 MnmE helical domain 123 451 1.3E-60 T 22-04-2016 IPR025867 MnmE, helical domain YE4178 747a4da47387341c2fd132b132a17354 454 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 454 1.9E-100 T 22-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 YE4178 747a4da47387341c2fd132b132a17354 454 Gene3D G3DSA:3.40.50.300 286 375 2.6E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE4178 747a4da47387341c2fd132b132a17354 454 SUPERFAMILY SSF116878 379 454 2.35E-51 T 22-04-2016 YE4178 747a4da47387341c2fd132b132a17354 454 SUPERFAMILY SSF116878 121 220 2.35E-51 T 22-04-2016 YE4178 747a4da47387341c2fd132b132a17354 454 SUPERFAMILY SSF52540 197 372 2.83E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE4178 747a4da47387341c2fd132b132a17354 454 SUPERFAMILY SSF52540 72 163 2.83E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1884 74993fbf1f42997d5187173aba9a3a41 279 PANTHER PTHR32243:SF8 1 279 2.1E-151 T 22-04-2016 YE1884 74993fbf1f42997d5187173aba9a3a41 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 273 1.0E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE1884 74993fbf1f42997d5187173aba9a3a41 279 SUPERFAMILY SSF161098 3 279 9.06E-71 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE1884 74993fbf1f42997d5187173aba9a3a41 279 Gene3D G3DSA:1.10.3720.10 2 266 3.8E-61 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE1884 74993fbf1f42997d5187173aba9a3a41 279 PANTHER PTHR32243 1 279 2.1E-151 T 22-04-2016 YE0720 e2f559b47c70eb97608e0c546dcc09d2 266 Pfam PF02548 Ketopantoate hydroxymethyltransferase 5 260 5.2E-106 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 YE0720 e2f559b47c70eb97608e0c546dcc09d2 266 PANTHER PTHR20881:SF3 1 266 3.2E-191 T 22-04-2016 YE0720 e2f559b47c70eb97608e0c546dcc09d2 266 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 5 265 42.112 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 YE0720 e2f559b47c70eb97608e0c546dcc09d2 266 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 2 266 3.0E-118 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 YE0720 e2f559b47c70eb97608e0c546dcc09d2 266 SUPERFAMILY SSF51621 5 265 3.45E-104 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YE0720 e2f559b47c70eb97608e0c546dcc09d2 266 Gene3D G3DSA:3.20.20.60 2 266 3.9E-110 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YE0720 e2f559b47c70eb97608e0c546dcc09d2 266 PANTHER PTHR20881 1 266 3.2E-191 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 YE0720 e2f559b47c70eb97608e0c546dcc09d2 266 PIRSF PIRSF000388 1 266 6.2E-99 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 YE0167 31e2a36f19af729590f22a51241f994c 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 YE0167 31e2a36f19af729590f22a51241f994c 108 SUPERFAMILY SSF52833 2 107 3.19E-41 T 22-04-2016 IPR012336 Thioredoxin-like fold YE0167 31e2a36f19af729590f22a51241f994c 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 6.8E-39 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 YE0167 31e2a36f19af729590f22a51241f994c 108 Pfam PF00085 Thioredoxin 5 106 1.3E-33 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 YE0167 31e2a36f19af729590f22a51241f994c 108 Gene3D G3DSA:3.40.30.10 2 107 7.8E-42 T 22-04-2016 IPR012336 Thioredoxin-like fold YE0167 31e2a36f19af729590f22a51241f994c 108 PANTHER PTHR10438 3 108 3.1E-41 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 YE0167 31e2a36f19af729590f22a51241f994c 108 PRINTS PR00421 Thioredoxin family signature 24 32 6.1E-10 T 22-04-2016 YE0167 31e2a36f19af729590f22a51241f994c 108 PRINTS PR00421 Thioredoxin family signature 32 41 6.1E-10 T 22-04-2016 YE0167 31e2a36f19af729590f22a51241f994c 108 PRINTS PR00421 Thioredoxin family signature 72 83 6.1E-10 T 22-04-2016 YE0167 31e2a36f19af729590f22a51241f994c 108 PIRSF PIRSF000077 2 108 2.3E-44 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 YE1586 35af8d26edda31602522e8d7488c5c2b 684 Pfam PF13361 UvrD-like helicase C-terminal domain 545 659 4.7E-14 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 YE1586 35af8d26edda31602522e8d7488c5c2b 684 Gene3D G3DSA:3.40.50.300 195 329 1.4E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1586 35af8d26edda31602522e8d7488c5c2b 684 Gene3D G3DSA:3.40.50.300 395 492 1.4E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1586 35af8d26edda31602522e8d7488c5c2b 684 Pfam PF12462 DNA helicase IV / RNA helicase N terminal 1 164 1.9E-65 T 22-04-2016 IPR022161 DNA helicase IV, N-terminal domain YE1586 35af8d26edda31602522e8d7488c5c2b 684 SUPERFAMILY SSF52540 195 345 1.15E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1586 35af8d26edda31602522e8d7488c5c2b 684 SUPERFAMILY SSF52540 385 675 1.15E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1586 35af8d26edda31602522e8d7488c5c2b 684 Gene3D G3DSA:3.40.50.300 498 675 1.6E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1586 35af8d26edda31602522e8d7488c5c2b 684 Pfam PF00580 UvrD/REP helicase N-terminal domain 197 490 9.8E-41 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 YE1586 35af8d26edda31602522e8d7488c5c2b 684 PANTHER PTHR11070:SF26 99 677 0.0 T 22-04-2016 YE1586 35af8d26edda31602522e8d7488c5c2b 684 PANTHER PTHR11070 99 677 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 YE1361 7664843a8fc2fad39243bc7f09f8c63b 155 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 154 1.1E-33 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family YE1361 7664843a8fc2fad39243bc7f09f8c63b 155 Pfam PF04074 Domain of unknown function (DUF386) 1 150 3.8E-35 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family YE1361 7664843a8fc2fad39243bc7f09f8c63b 155 SUPERFAMILY SSF51197 1 153 1.54E-37 T 22-04-2016 YE1361 7664843a8fc2fad39243bc7f09f8c63b 155 PANTHER PTHR34986:SF3 2 155 2.1E-84 T 22-04-2016 YE1361 7664843a8fc2fad39243bc7f09f8c63b 155 PANTHER PTHR34986 2 155 2.1E-84 T 22-04-2016 YE1361 7664843a8fc2fad39243bc7f09f8c63b 155 Gene3D G3DSA:2.60.120.370 1 153 4.9E-40 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family YE3962 07f7f1fe3ac4dbcaa59c78799e0ab574 326 Pfam PF13377 Periplasmic binding protein-like domain 169 320 2.3E-30 T 22-04-2016 YE3962 07f7f1fe3ac4dbcaa59c78799e0ab574 326 SMART SM00354 1 71 3.0E-30 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE3962 07f7f1fe3ac4dbcaa59c78799e0ab574 326 Gene3D G3DSA:3.40.50.2300 58 166 1.8E-41 T 22-04-2016 YE3962 07f7f1fe3ac4dbcaa59c78799e0ab574 326 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE3962 07f7f1fe3ac4dbcaa59c78799e0ab574 326 SUPERFAMILY SSF53822 61 324 1.43E-67 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YE3962 07f7f1fe3ac4dbcaa59c78799e0ab574 326 PANTHER PTHR30146:SF46 1 325 7.4E-226 T 22-04-2016 YE3962 07f7f1fe3ac4dbcaa59c78799e0ab574 326 SUPERFAMILY SSF47413 1 59 7.51E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE3962 07f7f1fe3ac4dbcaa59c78799e0ab574 326 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 1.3E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE3962 07f7f1fe3ac4dbcaa59c78799e0ab574 326 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 1.3E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE3962 07f7f1fe3ac4dbcaa59c78799e0ab574 326 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.7E-19 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE3962 07f7f1fe3ac4dbcaa59c78799e0ab574 326 Gene3D G3DSA:1.10.260.40 2 57 2.5E-25 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE3962 07f7f1fe3ac4dbcaa59c78799e0ab574 326 PANTHER PTHR30146 1 325 7.4E-226 T 22-04-2016 YE3962 07f7f1fe3ac4dbcaa59c78799e0ab574 326 Gene3D G3DSA:3.40.50.2300 167 322 7.1E-49 T 22-04-2016 YE0537 fc62a43c734601a4a9434c01a5a39f75 1028 PANTHER PTHR32063 1 1024 0.0 T 22-04-2016 YE0537 fc62a43c734601a4a9434c01a5a39f75 1028 SUPERFAMILY SSF82866 293 489 4.84E-37 T 22-04-2016 YE0537 fc62a43c734601a4a9434c01a5a39f75 1028 Gene3D G3DSA:3.30.70.1430 561 645 7.5E-6 T 22-04-2016 YE0537 fc62a43c734601a4a9434c01a5a39f75 1028 SUPERFAMILY SSF82693 559 634 3.31E-7 T 22-04-2016 YE0537 fc62a43c734601a4a9434c01a5a39f75 1028 Pfam PF00873 AcrB/AcrD/AcrF family 8 1012 2.5E-160 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE0537 fc62a43c734601a4a9434c01a5a39f75 1028 SUPERFAMILY SSF82693 136 182 2.79E-23 T 22-04-2016 YE0537 fc62a43c734601a4a9434c01a5a39f75 1028 SUPERFAMILY SSF82693 270 326 2.79E-23 T 22-04-2016 YE0537 fc62a43c734601a4a9434c01a5a39f75 1028 Gene3D G3DSA:1.20.1640.10 290 501 2.4E-46 T 22-04-2016 YE0537 fc62a43c734601a4a9434c01a5a39f75 1028 SUPERFAMILY SSF82866 795 1014 2.49E-45 T 22-04-2016 YE0537 fc62a43c734601a4a9434c01a5a39f75 1028 Gene3D G3DSA:3.30.2090.10 723 792 7.4E-5 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YE0537 fc62a43c734601a4a9434c01a5a39f75 1028 Gene3D G3DSA:3.30.2090.10 184 268 3.5E-14 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YE0537 fc62a43c734601a4a9434c01a5a39f75 1028 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 2.0E-19 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE0537 fc62a43c734601a4a9434c01a5a39f75 1028 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 2.0E-19 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE0537 fc62a43c734601a4a9434c01a5a39f75 1028 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 2.0E-19 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE0537 fc62a43c734601a4a9434c01a5a39f75 1028 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.0E-19 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE0537 fc62a43c734601a4a9434c01a5a39f75 1028 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 2.0E-19 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE0537 fc62a43c734601a4a9434c01a5a39f75 1028 SUPERFAMILY SSF82714 722 792 1.31E-8 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YE0537 fc62a43c734601a4a9434c01a5a39f75 1028 PANTHER PTHR32063:SF18 1 1024 0.0 T 22-04-2016 YE0537 fc62a43c734601a4a9434c01a5a39f75 1028 SUPERFAMILY SSF82714 184 268 5.1E-12 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YE0537 fc62a43c734601a4a9434c01a5a39f75 1028 SUPERFAMILY SSF82693 40 135 2.22E-19 T 22-04-2016 YE0537 fc62a43c734601a4a9434c01a5a39f75 1028 Gene3D G3DSA:3.30.70.1430 40 139 6.3E-24 T 22-04-2016 YE0537 fc62a43c734601a4a9434c01a5a39f75 1028 Gene3D G3DSA:1.10.3850.10 803 1013 3.4E-56 T 22-04-2016 YE2034 1d0b6f5f82ca47516d0a810740cf3b78 236 SUPERFAMILY SSF55785 26 133 7.75E-5 T 22-04-2016 IPR000014 PAS domain YE2034 1d0b6f5f82ca47516d0a810740cf3b78 236 SUPERFAMILY SSF46894 146 212 7.82E-10 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YE2034 1d0b6f5f82ca47516d0a810740cf3b78 236 SMART SM00421 159 216 0.0024 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE2034 1d0b6f5f82ca47516d0a810740cf3b78 236 Pfam PF00196 Bacterial regulatory proteins, luxR family 163 206 4.0E-5 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE2034 1d0b6f5f82ca47516d0a810740cf3b78 236 Pfam PF08448 PAS fold 30 130 1.8E-6 T 22-04-2016 IPR013656 PAS fold-4 YE2034 1d0b6f5f82ca47516d0a810740cf3b78 236 Gene3D G3DSA:1.10.10.10 157 209 2.4E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1201 fa97da4d2d3d64ed443cf909066c0678 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 226 1.2E-20 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YE1201 fa97da4d2d3d64ed443cf909066c0678 227 Gene3D G3DSA:3.40.50.2300 1 119 3.6E-35 T 22-04-2016 YE1201 fa97da4d2d3d64ed443cf909066c0678 227 Pfam PF00072 Response regulator receiver domain 3 111 4.2E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE1201 fa97da4d2d3d64ed443cf909066c0678 227 PANTHER PTHR26402 1 227 5.2E-78 T 22-04-2016 YE1201 fa97da4d2d3d64ed443cf909066c0678 227 SUPERFAMILY SSF46894 127 226 1.3E-25 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YE1201 fa97da4d2d3d64ed443cf909066c0678 227 Gene3D G3DSA:1.10.10.10 128 226 6.8E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1201 fa97da4d2d3d64ed443cf909066c0678 227 PANTHER PTHR26402:SF292 1 227 5.2E-78 T 22-04-2016 YE1201 fa97da4d2d3d64ed443cf909066c0678 227 SUPERFAMILY SSF52172 1 122 8.68E-37 T 22-04-2016 IPR011006 CheY-like superfamily YE1201 fa97da4d2d3d64ed443cf909066c0678 227 SMART SM00448 1 111 5.3E-39 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE1201 fa97da4d2d3d64ed443cf909066c0678 227 SMART SM00862 150 226 1.9E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YE1474 571179bed200460e53e95d751f54fde7 254 Pfam PF00455 DeoR C terminal sensor domain 77 234 4.1E-45 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain YE1474 571179bed200460e53e95d751f54fde7 254 PANTHER PTHR30363:SF8 2 254 1.3E-155 T 22-04-2016 YE1474 571179bed200460e53e95d751f54fde7 254 SMART SM00420 8 57 2.3E-8 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YE1474 571179bed200460e53e95d751f54fde7 254 Pfam PF08220 DeoR-like helix-turn-helix domain 8 57 1.5E-10 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YE1474 571179bed200460e53e95d751f54fde7 254 SMART SM01134 75 236 1.1E-57 T 22-04-2016 YE1474 571179bed200460e53e95d751f54fde7 254 PANTHER PTHR30363 2 254 1.3E-155 T 22-04-2016 YE1474 571179bed200460e53e95d751f54fde7 254 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 42 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 YE1474 571179bed200460e53e95d751f54fde7 254 Gene3D G3DSA:3.40.50.1360 77 216 1.6E-7 T 22-04-2016 YE1474 571179bed200460e53e95d751f54fde7 254 SUPERFAMILY SSF100950 76 238 2.2E-24 T 22-04-2016 YE1474 571179bed200460e53e95d751f54fde7 254 Gene3D G3DSA:1.10.10.10 3 43 5.7E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0481 2c4c895907909fb165970d245fc59f11 178 Gene3D G3DSA:3.20.20.70 47 153 8.7E-7 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YE0481 2c4c895907909fb165970d245fc59f11 178 PANTHER PTHR30352 18 178 3.3E-76 T 22-04-2016 YE0481 2c4c895907909fb165970d245fc59f11 178 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 26 177 4.1E-63 T 22-04-2016 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 KEGG: 00351+1.97.1.-|KEGG: 00361+1.97.1.-|KEGG: 00363+1.97.1.-|KEGG: 00625+1.97.1.- YE0481 2c4c895907909fb165970d245fc59f11 178 PANTHER PTHR30352:SF2 18 178 3.3E-76 T 22-04-2016 YE0481 2c4c895907909fb165970d245fc59f11 178 PIRSF PIRSF000368 18 178 1.3E-59 T 22-04-2016 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 KEGG: 00351+1.97.1.-|KEGG: 00361+1.97.1.-|KEGG: 00363+1.97.1.-|KEGG: 00625+1.97.1.- YE0481 2c4c895907909fb165970d245fc59f11 178 SUPERFAMILY SSF102114 38 138 1.69E-6 T 22-04-2016 YE0481 2c4c895907909fb165970d245fc59f11 178 ProSitePatterns PS01087 Radical activating enzymes signature. 38 59 - T 22-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 YE0481 2c4c895907909fb165970d245fc59f11 178 Pfam PF13353 4Fe-4S single cluster domain 36 175 2.0E-51 T 22-04-2016 YE0438 903271d54bf10fbacd390dd9a34492a0 706 Pfam PF00013 KH domain 556 614 1.1E-8 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 YE0438 903271d54bf10fbacd390dd9a34492a0 706 Gene3D G3DSA:3.30.1370.10 552 618 3.2E-25 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 YE0438 903271d54bf10fbacd390dd9a34492a0 706 PANTHER PTHR11252 4 699 0.0 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 YE0438 903271d54bf10fbacd390dd9a34492a0 706 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 3 693 30.314 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 YE0438 903271d54bf10fbacd390dd9a34492a0 706 Gene3D G3DSA:1.10.10.400 226 313 7.1E-26 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 YE0438 903271d54bf10fbacd390dd9a34492a0 706 Gene3D G3DSA:2.40.50.140 619 692 6.5E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE0438 903271d54bf10fbacd390dd9a34492a0 706 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 691 0.0 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 YE0438 903271d54bf10fbacd390dd9a34492a0 706 SUPERFAMILY SSF54211 5 144 7.59E-49 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YE0438 903271d54bf10fbacd390dd9a34492a0 706 Gene3D G3DSA:3.30.230.70 5 225 6.0E-82 T 22-04-2016 IPR027408 PNPase/RNase PH domain YE0438 903271d54bf10fbacd390dd9a34492a0 706 Gene3D G3DSA:3.30.230.70 314 542 4.1E-89 T 22-04-2016 IPR027408 PNPase/RNase PH domain YE0438 903271d54bf10fbacd390dd9a34492a0 706 Pfam PF03725 3' exoribonuclease family, domain 2 147 210 9.1E-14 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 YE0438 903271d54bf10fbacd390dd9a34492a0 706 Pfam PF03725 3' exoribonuclease family, domain 2 460 527 8.5E-6 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 YE0438 903271d54bf10fbacd390dd9a34492a0 706 SMART SM00316 620 690 1.1E-26 T 22-04-2016 IPR022967 RNA-binding domain, S1 YE0438 903271d54bf10fbacd390dd9a34492a0 706 SUPERFAMILY SSF55666 450 548 5.33E-28 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 YE0438 903271d54bf10fbacd390dd9a34492a0 706 Pfam PF01138 3' exoribonuclease family, domain 1 324 456 8.2E-22 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 YE0438 903271d54bf10fbacd390dd9a34492a0 706 Pfam PF01138 3' exoribonuclease family, domain 1 16 144 2.0E-18 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 YE0438 903271d54bf10fbacd390dd9a34492a0 706 SUPERFAMILY SSF46915 238 320 2.62E-19 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 YE0438 903271d54bf10fbacd390dd9a34492a0 706 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 241 320 8.5E-26 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 YE0438 903271d54bf10fbacd390dd9a34492a0 706 Pfam PF00575 S1 RNA binding domain 619 690 7.1E-22 T 22-04-2016 IPR003029 S1 domain GO:0003676 YE0438 903271d54bf10fbacd390dd9a34492a0 706 SUPERFAMILY SSF55666 145 234 3.37E-30 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 YE0438 903271d54bf10fbacd390dd9a34492a0 706 SUPERFAMILY SSF54211 293 488 4.71E-47 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YE0438 903271d54bf10fbacd390dd9a34492a0 706 SUPERFAMILY SSF50249 608 692 4.45E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE0438 903271d54bf10fbacd390dd9a34492a0 706 PIRSF PIRSF005499 2 705 8.5E-299 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 YE0438 903271d54bf10fbacd390dd9a34492a0 706 SUPERFAMILY SSF54791 554 621 2.72E-17 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 YE0438 903271d54bf10fbacd390dd9a34492a0 706 SMART SM00322 552 617 3.3E-12 T 22-04-2016 IPR004087 K Homology domain GO:0003676 YE0261 a9e4e9af3792e7533691264542a36a84 259 Pfam PF00902 Sec-independent protein translocase protein (TatC) 12 221 1.1E-63 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 YE0261 a9e4e9af3792e7533691264542a36a84 259 ProSitePatterns PS01218 TatC family signature. 154 173 - T 22-04-2016 IPR019820 Sec-independent periplasmic protein translocase, conserved site YE0261 a9e4e9af3792e7533691264542a36a84 259 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 9 226 5.3E-78 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 YE0261 a9e4e9af3792e7533691264542a36a84 259 PANTHER PTHR30371:SF0 4 258 4.7E-118 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 YE0261 a9e4e9af3792e7533691264542a36a84 259 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 3 242 18.025 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 YE0261 a9e4e9af3792e7533691264542a36a84 259 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 85 103 1.2E-49 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 YE0261 a9e4e9af3792e7533691264542a36a84 259 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 8 35 1.2E-49 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 YE0261 a9e4e9af3792e7533691264542a36a84 259 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 154 182 1.2E-49 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 YE0261 a9e4e9af3792e7533691264542a36a84 259 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 103 129 1.2E-49 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 YE0261 a9e4e9af3792e7533691264542a36a84 259 PANTHER PTHR30371 4 258 4.7E-118 T 22-04-2016 YE3278 93e1e5058a503e21cdcfe7588463482b 282 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 239 265 - T 22-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 YE3278 93e1e5058a503e21cdcfe7588463482b 282 PANTHER PTHR13773 2 279 3.0E-94 T 22-04-2016 YE3278 93e1e5058a503e21cdcfe7588463482b 282 Pfam PF01148 Cytidylyltransferase family 4 279 5.0E-69 T 22-04-2016 YE1108 9219abb694a484f8c1229a4d5d6ce114 1047 SUPERFAMILY SSF82693 49 142 8.63E-23 T 22-04-2016 YE1108 9219abb694a484f8c1229a4d5d6ce114 1047 Hamap MF_01423 Multidrug resistance protein MdtB [mdtB]. 1 1037 35.13 T 22-04-2016 IPR022831 Multidrug resistance protein MdtB YE1108 9219abb694a484f8c1229a4d5d6ce114 1047 Gene3D G3DSA:3.30.70.1430 49 150 4.1E-29 T 22-04-2016 YE1108 9219abb694a484f8c1229a4d5d6ce114 1047 SUPERFAMILY SSF82866 299 498 1.31E-46 T 22-04-2016 YE1108 9219abb694a484f8c1229a4d5d6ce114 1047 PANTHER PTHR32063:SF21 9 1045 0.0 T 22-04-2016 YE1108 9219abb694a484f8c1229a4d5d6ce114 1047 SUPERFAMILY SSF82866 799 1025 3.79E-47 T 22-04-2016 YE1108 9219abb694a484f8c1229a4d5d6ce114 1047 SUPERFAMILY SSF82714 192 275 6.15E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YE1108 9219abb694a484f8c1229a4d5d6ce114 1047 SUPERFAMILY SSF82693 146 191 3.53E-21 T 22-04-2016 YE1108 9219abb694a484f8c1229a4d5d6ce114 1047 SUPERFAMILY SSF82693 277 333 3.53E-21 T 22-04-2016 YE1108 9219abb694a484f8c1229a4d5d6ce114 1047 SUPERFAMILY SSF82693 565 662 1.46E-15 T 22-04-2016 YE1108 9219abb694a484f8c1229a4d5d6ce114 1047 Gene3D G3DSA:1.10.3850.10 807 1024 2.4E-57 T 22-04-2016 YE1108 9219abb694a484f8c1229a4d5d6ce114 1047 Gene3D G3DSA:3.30.70.1430 568 656 7.4E-11 T 22-04-2016 YE1108 9219abb694a484f8c1229a4d5d6ce114 1047 SUPERFAMILY SSF82714 719 802 1.06E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YE1108 9219abb694a484f8c1229a4d5d6ce114 1047 Pfam PF00873 AcrB/AcrD/AcrF family 13 1022 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE1108 9219abb694a484f8c1229a4d5d6ce114 1047 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 2.6E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE1108 9219abb694a484f8c1229a4d5d6ce114 1047 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 2.6E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE1108 9219abb694a484f8c1229a4d5d6ce114 1047 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 2.6E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE1108 9219abb694a484f8c1229a4d5d6ce114 1047 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 2.6E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE1108 9219abb694a484f8c1229a4d5d6ce114 1047 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 2.6E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE1108 9219abb694a484f8c1229a4d5d6ce114 1047 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 2.6E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE1108 9219abb694a484f8c1229a4d5d6ce114 1047 PRINTS PR00702 Acriflavin resistance protein family signature 47 65 2.6E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE1108 9219abb694a484f8c1229a4d5d6ce114 1047 PRINTS PR00702 Acriflavin resistance protein family signature 19 43 2.6E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE1108 9219abb694a484f8c1229a4d5d6ce114 1047 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 2.6E-81 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE1108 9219abb694a484f8c1229a4d5d6ce114 1047 Gene3D G3DSA:3.30.2090.10 720 802 7.3E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YE1108 9219abb694a484f8c1229a4d5d6ce114 1047 Gene3D G3DSA:3.30.2090.10 192 275 5.7E-18 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YE1108 9219abb694a484f8c1229a4d5d6ce114 1047 Gene3D G3DSA:1.20.1640.10 294 508 2.1E-55 T 22-04-2016 YE1108 9219abb694a484f8c1229a4d5d6ce114 1047 PANTHER PTHR32063 9 1045 0.0 T 22-04-2016 YE1593 08492b1b02d3251790744c555749c296 394 Gene3D G3DSA:3.30.750.80 72 178 4.3E-36 T 22-04-2016 YE1593 08492b1b02d3251790744c555749c296 394 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 108 368 8.8E-29 T 22-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 YE1593 08492b1b02d3251790744c555749c296 394 PANTHER PTHR11061:SF12 5 394 4.2E-123 T 22-04-2016 YE1593 08492b1b02d3251790744c555749c296 394 PANTHER PTHR11061 5 394 4.2E-123 T 22-04-2016 YE1593 08492b1b02d3251790744c555749c296 394 Gene3D G3DSA:2.30.130.10 1 70 2.8E-25 T 22-04-2016 IPR015947 PUA-like domain YE1593 08492b1b02d3251790744c555749c296 394 SUPERFAMILY SSF53335 77 390 1.02E-70 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE1593 08492b1b02d3251790744c555749c296 394 Gene3D G3DSA:3.40.50.150 183 393 2.1E-58 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE1593 08492b1b02d3251790744c555749c296 394 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 1 394 67.257 T 22-04-2016 IPR023542 rRNA large subunit methyltransferase I GO:0008649 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YE1593 08492b1b02d3251790744c555749c296 394 SUPERFAMILY SSF88697 2 70 6.96E-16 T 22-04-2016 IPR015947 PUA-like domain YE1593 08492b1b02d3251790744c555749c296 394 SMART SM00359 1 86 3.0E-16 T 22-04-2016 IPR002478 PUA domain GO:0003723 YE3147 b3d7adc38cc1c2a98b0c6b4771f876d5 163 Pfam PF04461 Protein of unknown function (DUF520) 2 162 8.9E-66 T 22-04-2016 IPR007551 Protein of unknown function DUF520 YE3147 b3d7adc38cc1c2a98b0c6b4771f876d5 163 PANTHER PTHR30476 1 163 5.7E-95 T 22-04-2016 YE3147 b3d7adc38cc1c2a98b0c6b4771f876d5 163 SUPERFAMILY SSF89963 91 163 2.88E-29 T 22-04-2016 IPR007551 Protein of unknown function DUF520 YE3147 b3d7adc38cc1c2a98b0c6b4771f876d5 163 Gene3D G3DSA:3.30.70.860 98 163 1.3E-35 T 22-04-2016 YE3147 b3d7adc38cc1c2a98b0c6b4771f876d5 163 PANTHER PTHR30476:SF0 1 163 5.7E-95 T 22-04-2016 YE3147 b3d7adc38cc1c2a98b0c6b4771f876d5 163 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 163 30.151 T 22-04-2016 IPR007551 Protein of unknown function DUF520 YE3147 b3d7adc38cc1c2a98b0c6b4771f876d5 163 SUPERFAMILY SSF89963 2 89 6.02E-30 T 22-04-2016 IPR007551 Protein of unknown function DUF520 YE3147 b3d7adc38cc1c2a98b0c6b4771f876d5 163 Gene3D G3DSA:3.30.70.990 9 97 2.8E-35 T 22-04-2016 YE3906 56a7de53caec126398e32f9a63c8b19e 167 Pfam PF00333 Ribosomal protein S5, N-terminal domain 11 74 1.6E-28 T 22-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 YE3906 56a7de53caec126398e32f9a63c8b19e 167 ProSitePatterns PS00585 Ribosomal protein S5 signature. 28 60 - T 22-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site YE3906 56a7de53caec126398e32f9a63c8b19e 167 SUPERFAMILY SSF54211 79 159 5.06E-27 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YE3906 56a7de53caec126398e32f9a63c8b19e 167 Pfam PF03719 Ribosomal protein S5, C-terminal domain 87 157 4.3E-30 T 22-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 YE3906 56a7de53caec126398e32f9a63c8b19e 167 Gene3D G3DSA:3.30.230.10 76 159 6.9E-34 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YE3906 56a7de53caec126398e32f9a63c8b19e 167 SUPERFAMILY SSF54768 9 75 3.87E-23 T 22-04-2016 YE3906 56a7de53caec126398e32f9a63c8b19e 167 Gene3D G3DSA:3.30.160.20 10 72 6.8E-30 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain YE3906 56a7de53caec126398e32f9a63c8b19e 167 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 163 34.59 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 YE3906 56a7de53caec126398e32f9a63c8b19e 167 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 2.4E-70 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 YE3906 56a7de53caec126398e32f9a63c8b19e 167 PANTHER PTHR13718 10 164 1.1E-79 T 22-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 YE1777 2765d7f1a982fec0ced71d5d15eb2eb2 321 Gene3D G3DSA:3.40.50.510 3 132 6.3E-46 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 YE1777 2765d7f1a982fec0ced71d5d15eb2eb2 321 Pfam PF03610 PTS system fructose IIA component 5 115 8.0E-33 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 YE1777 2765d7f1a982fec0ced71d5d15eb2eb2 321 PANTHER PTHR33799:SF3 3 321 1.1E-213 T 22-04-2016 YE1777 2765d7f1a982fec0ced71d5d15eb2eb2 321 Gene3D G3DSA:3.40.35.10 160 319 3.4E-69 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 YE1777 2765d7f1a982fec0ced71d5d15eb2eb2 321 SUPERFAMILY SSF52728 160 319 1.83E-56 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 YE1777 2765d7f1a982fec0ced71d5d15eb2eb2 321 Pfam PF03830 PTS system sorbose subfamily IIB component 162 308 3.5E-57 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 YE1777 2765d7f1a982fec0ced71d5d15eb2eb2 321 TIGRFAM TIGR00824 EIIA-man: PTS system, mannose/fructose/sorbose family, IIA component 3 115 9.1E-45 T 22-04-2016 IPR013789 Phosphotransferase system, mannose family IIA component GO:0005737|GO:0008643|GO:0016773 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YE1777 2765d7f1a982fec0ced71d5d15eb2eb2 321 SUPERFAMILY SSF53062 3 128 2.75E-35 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 YE1777 2765d7f1a982fec0ced71d5d15eb2eb2 321 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 162 308 1.5E-57 T 22-04-2016 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 YE1777 2765d7f1a982fec0ced71d5d15eb2eb2 321 PANTHER PTHR33799 3 321 1.1E-213 T 22-04-2016 YE2848 3ce9dc295a7f3da304e86c325247246c 410 SUPERFAMILY SSF58104 209 407 9.16E-47 T 22-04-2016 YE2848 3ce9dc295a7f3da304e86c325247246c 410 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 115 230 5.5E-15 T 22-04-2016 IPR000014 PAS domain YE2848 3ce9dc295a7f3da304e86c325247246c 410 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 1 108 3.6E-15 T 22-04-2016 IPR000014 PAS domain YE2848 3ce9dc295a7f3da304e86c325247246c 410 PANTHER PTHR24422 1 407 5.1E-221 T 22-04-2016 YE2848 3ce9dc295a7f3da304e86c325247246c 410 SUPERFAMILY SSF55785 1 103 1.92E-23 T 22-04-2016 IPR000014 PAS domain YE2848 3ce9dc295a7f3da304e86c325247246c 410 SUPERFAMILY SSF55785 118 222 3.84E-22 T 22-04-2016 IPR000014 PAS domain YE2848 3ce9dc295a7f3da304e86c325247246c 410 SMART SM00283 214 404 1.6E-9 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 YE2848 3ce9dc295a7f3da304e86c325247246c 410 SMART SM00086 183 225 9.6E-4 T 22-04-2016 IPR001610 PAC motif YE2848 3ce9dc295a7f3da304e86c325247246c 410 SMART SM00086 61 103 4.8E-7 T 22-04-2016 IPR001610 PAC motif YE2848 3ce9dc295a7f3da304e86c325247246c 410 PANTHER PTHR24422:SF10 1 407 5.1E-221 T 22-04-2016 YE2848 3ce9dc295a7f3da304e86c325247246c 410 Gene3D G3DSA:3.30.450.20 1 102 3.6E-23 T 22-04-2016 YE2848 3ce9dc295a7f3da304e86c325247246c 410 Gene3D G3DSA:3.30.450.20 120 220 3.6E-20 T 22-04-2016 YE2848 3ce9dc295a7f3da304e86c325247246c 410 Gene3D G3DSA:1.10.287.950 221 407 7.4E-43 T 22-04-2016 YE2848 3ce9dc295a7f3da304e86c325247246c 410 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 257 407 2.0E-32 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 YE2848 3ce9dc295a7f3da304e86c325247246c 410 Pfam PF08448 PAS fold 121 223 9.7E-12 T 22-04-2016 IPR013656 PAS fold-4 YE2848 3ce9dc295a7f3da304e86c325247246c 410 Pfam PF08447 PAS fold 12 95 8.7E-15 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 YE1057 5ced1aca9e2d123bb05b379ead3ab249 409 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 6 400 54.682 T 22-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 YE1057 5ced1aca9e2d123bb05b379ead3ab249 409 SUPERFAMILY SSF53383 8 395 1.07E-115 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YE1057 5ced1aca9e2d123bb05b379ead3ab249 409 PANTHER PTHR11601:SF45 7 409 9.5E-244 T 22-04-2016 YE1057 5ced1aca9e2d123bb05b379ead3ab249 409 Gene3D G3DSA:3.90.1150.10 260 379 6.6E-51 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YE1057 5ced1aca9e2d123bb05b379ead3ab249 409 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 6 409 1.1E-230 T 22-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 YE1057 5ced1aca9e2d123bb05b379ead3ab249 409 PANTHER PTHR11601 7 409 9.5E-244 T 22-04-2016 YE1057 5ced1aca9e2d123bb05b379ead3ab249 409 Pfam PF00266 Aminotransferase class-V 10 373 1.6E-87 T 22-04-2016 IPR000192 Aminotransferase class V domain YE1057 5ced1aca9e2d123bb05b379ead3ab249 409 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 202 221 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site YE1057 5ced1aca9e2d123bb05b379ead3ab249 409 PIRSF PIRSF005572 7 389 1.3E-138 T 22-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 YE1057 5ced1aca9e2d123bb05b379ead3ab249 409 Gene3D G3DSA:3.40.640.10 22 259 3.9E-96 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YE1231 222211bb9aeed69e1915aec91d733dcf 411 PANTHER PTHR11751:SF302 18 398 7.1E-269 T 22-04-2016 YE1231 222211bb9aeed69e1915aec91d733dcf 411 SUPERFAMILY SSF53383 9 394 2.15E-107 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YE1231 222211bb9aeed69e1915aec91d733dcf 411 Pfam PF00155 Aminotransferase class I and II 37 387 1.8E-57 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YE1231 222211bb9aeed69e1915aec91d733dcf 411 Gene3D G3DSA:3.40.640.10 50 263 4.5E-62 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YE1231 222211bb9aeed69e1915aec91d733dcf 411 Gene3D G3DSA:3.90.1150.10 264 395 4.7E-44 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YE1231 222211bb9aeed69e1915aec91d733dcf 411 PANTHER PTHR11751 18 398 7.1E-269 T 22-04-2016 YE1144 431819284f56560cfa79f085e814c15f 211 PANTHER PTHR10655:SF17 6 200 9.4E-21 T 22-04-2016 YE1144 431819284f56560cfa79f085e814c15f 211 PANTHER PTHR10655 6 200 9.4E-21 T 22-04-2016 YE1144 431819284f56560cfa79f085e814c15f 211 SUPERFAMILY SSF53474 6 204 2.28E-31 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE1144 431819284f56560cfa79f085e814c15f 211 Gene3D G3DSA:3.40.50.1820 4 207 5.8E-37 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE1144 431819284f56560cfa79f085e814c15f 211 Pfam PF02230 Phospholipase/Carboxylesterase 5 205 1.1E-33 T 22-04-2016 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 YE3202 19f7677483c232dfba791b5fb2504e46 367 SUPERFAMILY SSF53633 6 256 6.94E-65 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YE3202 19f7677483c232dfba791b5fb2504e46 367 SUPERFAMILY SSF88697 276 366 8.84E-23 T 22-04-2016 IPR015947 PUA-like domain YE3202 19f7677483c232dfba791b5fb2504e46 367 Gene3D G3DSA:2.30.130.10 273 365 2.1E-25 T 22-04-2016 IPR015947 PUA-like domain YE3202 19f7677483c232dfba791b5fb2504e46 367 Gene3D G3DSA:3.40.1160.10 4 258 2.7E-57 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YE3202 19f7677483c232dfba791b5fb2504e46 367 Pfam PF00696 Amino acid kinase family 6 234 2.4E-44 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YE3202 19f7677483c232dfba791b5fb2504e46 367 TIGRFAM TIGR01027 proB: glutamate 5-kinase 5 365 8.9E-152 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 YE3202 19f7677483c232dfba791b5fb2504e46 367 ProSitePatterns PS00902 Glutamate 5-kinase signature. 207 224 - T 22-04-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 YE3202 19f7677483c232dfba791b5fb2504e46 367 PRINTS PR00474 Glutamate 5-kinase family signature 148 175 1.0E-56 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 YE3202 19f7677483c232dfba791b5fb2504e46 367 PRINTS PR00474 Glutamate 5-kinase family signature 42 56 1.0E-56 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 YE3202 19f7677483c232dfba791b5fb2504e46 367 PRINTS PR00474 Glutamate 5-kinase family signature 209 229 1.0E-56 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 YE3202 19f7677483c232dfba791b5fb2504e46 367 PRINTS PR00474 Glutamate 5-kinase family signature 76 104 1.0E-56 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 YE3202 19f7677483c232dfba791b5fb2504e46 367 PRINTS PR00474 Glutamate 5-kinase family signature 116 137 1.0E-56 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 YE3202 19f7677483c232dfba791b5fb2504e46 367 Pfam PF01472 PUA domain 276 350 4.4E-20 T 22-04-2016 IPR002478 PUA domain GO:0003723 YE3202 19f7677483c232dfba791b5fb2504e46 367 Hamap MF_00456 Glutamate 5-kinase [proB]. 5 258 35.79 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 YE3202 19f7677483c232dfba791b5fb2504e46 367 SMART SM00359 276 359 9.2E-20 T 22-04-2016 IPR002478 PUA domain GO:0003723 YE3202 19f7677483c232dfba791b5fb2504e46 367 PANTHER PTHR11063 5 367 3.5E-144 T 22-04-2016 YE3202 19f7677483c232dfba791b5fb2504e46 367 PIRSF PIRSF000729 1 367 5.2E-141 T 22-04-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 YE4071 9a0d466f593c8ef59c4d1dbeabca3bb7 509 SUPERFAMILY SSF141868 260 502 8.11E-77 T 22-04-2016 IPR001633 EAL domain YE4071 9a0d466f593c8ef59c4d1dbeabca3bb7 509 SMART SM00052 255 500 1.1E-95 T 22-04-2016 IPR001633 EAL domain YE4071 9a0d466f593c8ef59c4d1dbeabca3bb7 509 Gene3D G3DSA:3.20.20.450 260 502 3.3E-80 T 22-04-2016 IPR001633 EAL domain YE4071 9a0d466f593c8ef59c4d1dbeabca3bb7 509 Pfam PF00672 HAMP domain 163 232 3.2E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YE4071 9a0d466f593c8ef59c4d1dbeabca3bb7 509 PANTHER PTHR33121 206 502 1.9E-62 T 22-04-2016 YE4071 9a0d466f593c8ef59c4d1dbeabca3bb7 509 PANTHER PTHR33121 65 76 1.9E-62 T 22-04-2016 YE4071 9a0d466f593c8ef59c4d1dbeabca3bb7 509 PANTHER PTHR33121:SF13 206 502 1.9E-62 T 22-04-2016 YE4071 9a0d466f593c8ef59c4d1dbeabca3bb7 509 PANTHER PTHR33121:SF13 65 76 1.9E-62 T 22-04-2016 YE4071 9a0d466f593c8ef59c4d1dbeabca3bb7 509 Pfam PF00563 EAL domain 261 495 8.1E-64 T 22-04-2016 IPR001633 EAL domain YE4071 9a0d466f593c8ef59c4d1dbeabca3bb7 509 Pfam PF17154 Gammaproteobacterial periplasmic sensor domain 36 156 2.6E-58 T 22-04-2016 IPR033419 Gammaproteobacterial periplasmic sensor domain GAPES3 YE0565 5ea1eb5be8aa5645872f227b2d328c2d 204 Pfam PF04972 BON domain 58 124 9.9E-22 T 22-04-2016 IPR007055 BON domain YE0565 5ea1eb5be8aa5645872f227b2d328c2d 204 Pfam PF04972 BON domain 137 204 2.2E-19 T 22-04-2016 IPR007055 BON domain YE0565 5ea1eb5be8aa5645872f227b2d328c2d 204 SMART SM00749 141 204 7.6E-12 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria YE0565 5ea1eb5be8aa5645872f227b2d328c2d 204 SMART SM00749 62 125 1.1E-11 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria YE0565 5ea1eb5be8aa5645872f227b2d328c2d 204 PANTHER PTHR34606:SF3 37 204 7.4E-67 T 22-04-2016 YE0565 5ea1eb5be8aa5645872f227b2d328c2d 204 PANTHER PTHR34606 37 204 7.4E-67 T 22-04-2016 YE4022 42e4c4fc6b488b05ecc7d089fe5adb1e 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 52 2.7E-16 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE4022 42e4c4fc6b488b05ecc7d089fe5adb1e 331 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 64 306 1.1E-31 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain YE4022 42e4c4fc6b488b05ecc7d089fe5adb1e 331 PANTHER PTHR30146 4 327 3.4E-190 T 22-04-2016 YE4022 42e4c4fc6b488b05ecc7d089fe5adb1e 331 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE4022 42e4c4fc6b488b05ecc7d089fe5adb1e 331 SUPERFAMILY SSF53822 63 316 8.25E-56 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YE4022 42e4c4fc6b488b05ecc7d089fe5adb1e 331 PANTHER PTHR30146:SF2 4 327 3.4E-190 T 22-04-2016 YE4022 42e4c4fc6b488b05ecc7d089fe5adb1e 331 Gene3D G3DSA:1.10.260.40 4 59 7.2E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE4022 42e4c4fc6b488b05ecc7d089fe5adb1e 331 SMART SM00354 5 75 3.5E-25 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE4022 42e4c4fc6b488b05ecc7d089fe5adb1e 331 Gene3D G3DSA:3.40.50.2300 174 330 1.2E-41 T 22-04-2016 YE4022 42e4c4fc6b488b05ecc7d089fe5adb1e 331 Gene3D G3DSA:3.40.50.2300 62 173 4.0E-39 T 22-04-2016 YE4022 42e4c4fc6b488b05ecc7d089fe5adb1e 331 SUPERFAMILY SSF47413 5 63 2.6E-13 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE1571 73cfe20480d7d9511c048e8b6f8c21df 706 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 702 32.27 T 22-04-2016 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YE1571 73cfe20480d7d9511c048e8b6f8c21df 706 Gene3D G3DSA:3.40.50.150 432 703 4.6E-74 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE1571 73cfe20480d7d9511c048e8b6f8c21df 706 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 195 206 - T 22-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YE1571 73cfe20480d7d9511c048e8b6f8c21df 706 PANTHER PTHR18895 401 679 6.3E-134 T 22-04-2016 YE1571 73cfe20480d7d9511c048e8b6f8c21df 706 Pfam PF02926 THUMP domain 23 152 5.0E-15 T 22-04-2016 IPR004114 THUMP domain GO:0003723 YE1571 73cfe20480d7d9511c048e8b6f8c21df 706 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 306 312 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 YE1571 73cfe20480d7d9511c048e8b6f8c21df 706 PIRSF PIRSF037618 1 703 2.3E-295 T 22-04-2016 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YE1571 73cfe20480d7d9511c048e8b6f8c21df 706 SUPERFAMILY SSF53335 258 373 2.46E-37 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE1571 73cfe20480d7d9511c048e8b6f8c21df 706 SUPERFAMILY SSF53335 146 217 2.46E-37 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE1571 73cfe20480d7d9511c048e8b6f8c21df 706 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 438 663 3.1E-19 T 22-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 YE1571 73cfe20480d7d9511c048e8b6f8c21df 706 Pfam PF01170 Putative RNA methylase family UPF0020 162 375 3.2E-61 T 22-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YE1571 73cfe20480d7d9511c048e8b6f8c21df 706 SMART SM00981 56 154 1.5E-18 T 22-04-2016 IPR004114 THUMP domain GO:0003723 YE1571 73cfe20480d7d9511c048e8b6f8c21df 706 PANTHER PTHR18895:SF62 401 679 6.3E-134 T 22-04-2016 YE1571 73cfe20480d7d9511c048e8b6f8c21df 706 Gene3D G3DSA:3.40.50.150 150 214 6.3E-30 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE1571 73cfe20480d7d9511c048e8b6f8c21df 706 Gene3D G3DSA:3.40.50.150 255 348 6.3E-30 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE1571 73cfe20480d7d9511c048e8b6f8c21df 706 SUPERFAMILY SSF53335 396 701 1.17E-67 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE0322 c4237af8ff1b254246c26a3c34a9a11b 842 Gene3D G3DSA:3.30.70.100 755 827 1.9E-9 T 22-04-2016 YE0322 c4237af8ff1b254246c26a3c34a9a11b 842 Pfam PF12607 Protein of unknown function (DUF3772) 182 241 5.4E-15 T 22-04-2016 IPR022249 Domain of unknown function DUF3772 YE0322 c4237af8ff1b254246c26a3c34a9a11b 842 PANTHER PTHR30347 257 830 3.7E-114 T 22-04-2016 YE0322 c4237af8ff1b254246c26a3c34a9a11b 842 SUPERFAMILY SSF82861 587 671 1.57E-11 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 YE0322 c4237af8ff1b254246c26a3c34a9a11b 842 Pfam PF00924 Mechanosensitive ion channel 631 828 1.9E-41 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 YE0322 c4237af8ff1b254246c26a3c34a9a11b 842 SUPERFAMILY SSF50182 673 737 3.04E-15 T 22-04-2016 IPR010920 LSM domain YE0322 c4237af8ff1b254246c26a3c34a9a11b 842 Gene3D G3DSA:2.30.30.60 688 736 1.8E-15 T 22-04-2016 YE0322 c4237af8ff1b254246c26a3c34a9a11b 842 SUPERFAMILY SSF82689 746 838 1.96E-11 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 YE0322 c4237af8ff1b254246c26a3c34a9a11b 842 PANTHER PTHR30347:SF3 257 830 3.7E-114 T 22-04-2016 YE2461 8bc4c227566c56208da4c17b00667a3c 406 Pfam PF01979 Amidohydrolase family 64 387 3.5E-15 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 YE2461 8bc4c227566c56208da4c17b00667a3c 406 SUPERFAMILY SSF51556 66 366 2.42E-85 T 22-04-2016 IPR032466 Metal-dependent hydrolase YE2461 8bc4c227566c56208da4c17b00667a3c 406 TIGRFAM TIGR01224 hutI: imidazolonepropionase 28 403 4.0E-161 T 22-04-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 YE2461 8bc4c227566c56208da4c17b00667a3c 406 PANTHER PTHR22642:SF1 1 403 1.4E-151 T 22-04-2016 YE2461 8bc4c227566c56208da4c17b00667a3c 406 Hamap MF_00372 Imidazolonepropionase [hutI]. 8 405 41.966 T 22-04-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 YE2461 8bc4c227566c56208da4c17b00667a3c 406 Gene3D G3DSA:3.20.20.140 77 383 1.1E-37 T 22-04-2016 YE2461 8bc4c227566c56208da4c17b00667a3c 406 Gene3D G3DSA:2.30.40.10 24 76 3.2E-10 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YE2461 8bc4c227566c56208da4c17b00667a3c 406 PANTHER PTHR22642 1 403 1.4E-151 T 22-04-2016 YE2461 8bc4c227566c56208da4c17b00667a3c 406 SUPERFAMILY SSF51338 6 66 3.18E-26 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YE2461 8bc4c227566c56208da4c17b00667a3c 406 SUPERFAMILY SSF51338 367 403 3.18E-26 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YE0487 71c369d3b02a2942dda6651e5c9d7833 238 Pfam PF00005 ABC transporter 24 171 4.8E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE0487 71c369d3b02a2942dda6651e5c9d7833 238 PANTHER PTHR24220 5 230 1.7E-100 T 22-04-2016 YE0487 71c369d3b02a2942dda6651e5c9d7833 238 PANTHER PTHR24220:SF81 5 230 1.7E-100 T 22-04-2016 YE0487 71c369d3b02a2942dda6651e5c9d7833 238 SMART SM00382 32 220 6.6E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain YE0487 71c369d3b02a2942dda6651e5c9d7833 238 Gene3D G3DSA:3.40.50.300 3 229 3.8E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0487 71c369d3b02a2942dda6651e5c9d7833 238 SUPERFAMILY SSF52540 3 226 7.99E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0487 71c369d3b02a2942dda6651e5c9d7833 238 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE3099 e7a194f0841a1e8a6ff35fb834143e6b 218 SUPERFAMILY SSF48498 85 203 1.29E-13 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal YE3099 e7a194f0841a1e8a6ff35fb834143e6b 218 Gene3D G3DSA:1.10.10.60 1 44 3.6E-21 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE3099 e7a194f0841a1e8a6ff35fb834143e6b 218 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 84 203 8.3E-55 T 22-04-2016 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 YE3099 e7a194f0841a1e8a6ff35fb834143e6b 218 Gene3D G3DSA:1.10.10.60 45 62 1.6E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE3099 e7a194f0841a1e8a6ff35fb834143e6b 218 PANTHER PTHR30328 1 218 6.4E-145 T 22-04-2016 YE3099 e7a194f0841a1e8a6ff35fb834143e6b 218 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 2.5E-18 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YE3099 e7a194f0841a1e8a6ff35fb834143e6b 218 Gene3D G3DSA:1.10.357.10 63 204 4.6E-16 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 YE3099 e7a194f0841a1e8a6ff35fb834143e6b 218 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site YE3099 e7a194f0841a1e8a6ff35fb834143e6b 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 4.6E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YE3099 e7a194f0841a1e8a6ff35fb834143e6b 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 4.6E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YE3099 e7a194f0841a1e8a6ff35fb834143e6b 218 SUPERFAMILY SSF46689 2 67 1.28E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE3099 e7a194f0841a1e8a6ff35fb834143e6b 218 PANTHER PTHR30328:SF26 1 218 6.4E-145 T 22-04-2016 YE0353 94d335126c7735af822a03ef3f518d20 97 PANTHER PTHR10772 1 96 2.0E-38 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 YE0353 94d335126c7735af822a03ef3f518d20 97 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 5.1E-29 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 YE0353 94d335126c7735af822a03ef3f518d20 97 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 23.817 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 YE0353 94d335126c7735af822a03ef3f518d20 97 SUPERFAMILY SSF50129 1 96 5.56E-31 T 22-04-2016 IPR011032 GroES-like YE0353 94d335126c7735af822a03ef3f518d20 97 PRINTS PR00297 10kDa chaperonin signature 82 95 2.1E-27 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 YE0353 94d335126c7735af822a03ef3f518d20 97 PRINTS PR00297 10kDa chaperonin signature 60 72 2.1E-27 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 YE0353 94d335126c7735af822a03ef3f518d20 97 PRINTS PR00297 10kDa chaperonin signature 3 18 2.1E-27 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 YE0353 94d335126c7735af822a03ef3f518d20 97 PRINTS PR00297 10kDa chaperonin signature 25 46 2.1E-27 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 YE0353 94d335126c7735af822a03ef3f518d20 97 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 22-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 YE0353 94d335126c7735af822a03ef3f518d20 97 Gene3D G3DSA:2.30.33.40 1 96 1.0E-31 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 YE0353 94d335126c7735af822a03ef3f518d20 97 SMART SM00883 2 95 5.7E-49 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 YE3652 1a19a0470aa2625b3907f00278afd8f2 277 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 229 244 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 YE3652 1a19a0470aa2625b3907f00278afd8f2 277 Gene3D G3DSA:3.20.20.100 4 272 1.6E-102 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YE3652 1a19a0470aa2625b3907f00278afd8f2 277 SUPERFAMILY SSF51430 5 267 3.01E-88 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YE3652 1a19a0470aa2625b3907f00278afd8f2 277 PANTHER PTHR11732 3 276 4.7E-134 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta YE3652 1a19a0470aa2625b3907f00278afd8f2 277 PRINTS PR00069 Aldo-keto reductase signature 196 220 4.6E-46 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YE3652 1a19a0470aa2625b3907f00278afd8f2 277 PRINTS PR00069 Aldo-keto reductase signature 157 186 4.6E-46 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YE3652 1a19a0470aa2625b3907f00278afd8f2 277 PRINTS PR00069 Aldo-keto reductase signature 37 61 4.6E-46 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YE3652 1a19a0470aa2625b3907f00278afd8f2 277 PRINTS PR00069 Aldo-keto reductase signature 123 140 4.6E-46 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YE3652 1a19a0470aa2625b3907f00278afd8f2 277 PRINTS PR00069 Aldo-keto reductase signature 91 109 4.6E-46 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YE3652 1a19a0470aa2625b3907f00278afd8f2 277 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 41 58 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 YE3652 1a19a0470aa2625b3907f00278afd8f2 277 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 123 140 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 YE3652 1a19a0470aa2625b3907f00278afd8f2 277 Pfam PF00248 Aldo/keto reductase family 202 260 2.3E-9 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YE3652 1a19a0470aa2625b3907f00278afd8f2 277 Pfam PF00248 Aldo/keto reductase family 18 192 6.1E-37 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YE3652 1a19a0470aa2625b3907f00278afd8f2 277 PIRSF PIRSF000097 1 271 1.0E-92 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YE3243 f468d5dcf308d5fabb9ae3a343f86e50 510 PANTHER PTHR23501 3 500 0.0 T 22-04-2016 YE3243 f468d5dcf308d5fabb9ae3a343f86e50 510 Pfam PF07690 Major Facilitator Superfamily 18 412 4.5E-55 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YE3243 f468d5dcf308d5fabb9ae3a343f86e50 510 SUPERFAMILY SSF103473 250 422 1.96E-73 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE3243 f468d5dcf308d5fabb9ae3a343f86e50 510 SUPERFAMILY SSF103473 474 499 1.96E-73 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE3243 f468d5dcf308d5fabb9ae3a343f86e50 510 SUPERFAMILY SSF103473 8 195 1.96E-73 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE3243 f468d5dcf308d5fabb9ae3a343f86e50 510 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 14 497 5.6E-210 T 22-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 YE3243 f468d5dcf308d5fabb9ae3a343f86e50 510 PANTHER PTHR23501:SF52 3 500 0.0 T 22-04-2016 YE3243 f468d5dcf308d5fabb9ae3a343f86e50 510 Gene3D G3DSA:1.20.1250.20 475 500 3.9E-24 T 22-04-2016 YE3243 f468d5dcf308d5fabb9ae3a343f86e50 510 Gene3D G3DSA:1.20.1250.20 16 189 3.8E-30 T 22-04-2016 YE3243 f468d5dcf308d5fabb9ae3a343f86e50 510 Gene3D G3DSA:1.20.1250.20 265 423 3.9E-24 T 22-04-2016 YE3243 f468d5dcf308d5fabb9ae3a343f86e50 510 PRINTS PR01036 Tetracycline resistance protein TetB signature 17 41 6.9E-5 T 22-04-2016 YE3243 f468d5dcf308d5fabb9ae3a343f86e50 510 PRINTS PR01036 Tetracycline resistance protein TetB signature 108 128 6.9E-5 T 22-04-2016 YE3243 f468d5dcf308d5fabb9ae3a343f86e50 510 PRINTS PR01036 Tetracycline resistance protein TetB signature 204 222 6.9E-5 T 22-04-2016 YE3243 f468d5dcf308d5fabb9ae3a343f86e50 510 PRINTS PR01036 Tetracycline resistance protein TetB signature 138 162 6.9E-5 T 22-04-2016 YE2884 c1aa80fa7d08ea7ce246a1545f258dc4 311 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 37 265 1.9E-81 T 22-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 YE2884 c1aa80fa7d08ea7ce246a1545f258dc4 311 Gene3D G3DSA:3.40.710.10 12 281 2.7E-67 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YE2884 c1aa80fa7d08ea7ce246a1545f258dc4 311 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 70 81 4.0E-14 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 YE2884 c1aa80fa7d08ea7ce246a1545f258dc4 311 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 147 160 4.0E-14 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 YE2884 c1aa80fa7d08ea7ce246a1545f258dc4 311 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 120 137 4.0E-14 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 YE2884 c1aa80fa7d08ea7ce246a1545f258dc4 311 PANTHER PTHR21581 13 310 1.7E-183 T 22-04-2016 YE2884 c1aa80fa7d08ea7ce246a1545f258dc4 311 PANTHER PTHR21581:SF8 13 310 1.7E-183 T 22-04-2016 YE2884 c1aa80fa7d08ea7ce246a1545f258dc4 311 SUPERFAMILY SSF56601 5 281 2.6E-62 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YE3768 2338c98c52d95ce88eeccc622e0280b7 128 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 126 1.8E-52 T 22-04-2016 IPR006056 RidA family YE3768 2338c98c52d95ce88eeccc622e0280b7 128 SUPERFAMILY SSF55298 4 127 5.03E-43 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like YE3768 2338c98c52d95ce88eeccc622e0280b7 128 Gene3D G3DSA:3.30.1330.40 3 126 1.3E-45 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like YE3768 2338c98c52d95ce88eeccc622e0280b7 128 PANTHER PTHR11803 1 127 3.2E-51 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family YE3768 2338c98c52d95ce88eeccc622e0280b7 128 Pfam PF01042 Endoribonuclease L-PSP 8 126 3.1E-43 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family YE3768 2338c98c52d95ce88eeccc622e0280b7 128 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 103 121 - T 22-04-2016 IPR019897 RidA, conserved site YE1430 f98ec628178c8ee66dc6ee908d1c1d8d 602 PIRSF PIRSF002741 6 593 1.5E-146 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 YE1430 f98ec628178c8ee66dc6ee908d1c1d8d 602 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 99 504 2.7E-73 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain YE1430 f98ec628178c8ee66dc6ee908d1c1d8d 602 SUPERFAMILY SSF53850 50 591 2.35E-112 T 22-04-2016 YE1430 f98ec628178c8ee66dc6ee908d1c1d8d 602 Gene3D G3DSA:3.40.190.10 159 320 9.7E-31 T 22-04-2016 YE1430 f98ec628178c8ee66dc6ee908d1c1d8d 602 Gene3D G3DSA:3.10.105.10 321 560 4.3E-50 T 22-04-2016 YE1430 f98ec628178c8ee66dc6ee908d1c1d8d 602 PANTHER PTHR30290 1 353 6.0E-249 T 22-04-2016 YE1430 f98ec628178c8ee66dc6ee908d1c1d8d 602 PANTHER PTHR30290 380 600 6.0E-249 T 22-04-2016 YE1430 f98ec628178c8ee66dc6ee908d1c1d8d 602 PANTHER PTHR30290:SF2 1 353 6.0E-249 T 22-04-2016 YE1430 f98ec628178c8ee66dc6ee908d1c1d8d 602 PANTHER PTHR30290:SF2 380 600 6.0E-249 T 22-04-2016 YE4150 919a679c78eee20b20976812ed9cd646 689 Gene3D G3DSA:1.10.730.10 582 678 1.3E-5 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YE4150 919a679c78eee20b20976812ed9cd646 689 PANTHER PTHR30075 1 689 0.0 T 22-04-2016 YE4150 919a679c78eee20b20976812ed9cd646 689 SUPERFAMILY SSF109604 339 538 8.58E-16 T 22-04-2016 YE4150 919a679c78eee20b20976812ed9cd646 689 Pfam PF05746 DALR anticodon binding domain 582 679 6.8E-9 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 YE4150 919a679c78eee20b20976812ed9cd646 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 7.8E-37 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YE4150 919a679c78eee20b20976812ed9cd646 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 7.8E-37 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YE4150 919a679c78eee20b20976812ed9cd646 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 394 413 7.8E-37 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YE4150 919a679c78eee20b20976812ed9cd646 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 318 334 7.8E-37 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YE4150 919a679c78eee20b20976812ed9cd646 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 246 261 7.8E-37 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YE4150 919a679c78eee20b20976812ed9cd646 689 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 551 2.2E-210 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YE4150 919a679c78eee20b20976812ed9cd646 689 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 689 0.0 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YE4150 919a679c78eee20b20976812ed9cd646 689 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 688 26.714 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YE2189 6916a80a0737acc0a454bbf3dd646a7f 300 Gene3D G3DSA:3.20.20.370 82 267 8.1E-28 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 YE2189 6916a80a0737acc0a454bbf3dd646a7f 300 Gene3D G3DSA:3.20.20.370 13 38 8.1E-28 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 YE2189 6916a80a0737acc0a454bbf3dd646a7f 300 PANTHER PTHR10587:SF71 98 173 5.6E-12 T 22-04-2016 YE2189 6916a80a0737acc0a454bbf3dd646a7f 300 PANTHER PTHR10587:SF71 2 61 5.6E-12 T 22-04-2016 YE2189 6916a80a0737acc0a454bbf3dd646a7f 300 PANTHER PTHR10587 98 173 5.6E-12 T 22-04-2016 YE2189 6916a80a0737acc0a454bbf3dd646a7f 300 PANTHER PTHR10587 2 61 5.6E-12 T 22-04-2016 YE2189 6916a80a0737acc0a454bbf3dd646a7f 300 SUPERFAMILY SSF88713 86 243 4.13E-25 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 YE2189 6916a80a0737acc0a454bbf3dd646a7f 300 SUPERFAMILY SSF88713 14 41 4.13E-25 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 YE2189 6916a80a0737acc0a454bbf3dd646a7f 300 Pfam PF01522 Polysaccharide deacetylase 15 162 1.5E-11 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 YE2189 6916a80a0737acc0a454bbf3dd646a7f 300 Hamap MF_01870 Probable 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD [arnD]. 1 296 65.009 T 22-04-2016 IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable GO:0016811 UniPathway: UPA00030|UniPathway: UPA00036 YE2051 094741f01c7d71fa65b18934875223ef 315 SUPERFAMILY SSF53850 136 299 2.64E-19 T 22-04-2016 YE2051 094741f01c7d71fa65b18934875223ef 315 PANTHER PTHR30118 5 310 2.7E-32 T 22-04-2016 YE2051 094741f01c7d71fa65b18934875223ef 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.1E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE2051 094741f01c7d71fa65b18934875223ef 315 Gene3D G3DSA:1.10.10.10 4 84 8.1E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2051 094741f01c7d71fa65b18934875223ef 315 Gene3D G3DSA:3.40.190.10 186 266 4.1E-7 T 22-04-2016 YE2051 094741f01c7d71fa65b18934875223ef 315 Pfam PF03466 LysR substrate binding domain 139 296 1.8E-10 T 22-04-2016 IPR005119 LysR, substrate-binding YE2051 094741f01c7d71fa65b18934875223ef 315 SUPERFAMILY SSF46785 4 83 1.91E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2051 094741f01c7d71fa65b18934875223ef 315 Gene3D G3DSA:3.40.190.10 140 185 1.7E-6 T 22-04-2016 YE0433 7f651ae64bae80d437ed08cb9708e7eb 495 Gene3D G3DSA:1.10.150.20 357 414 1.3E-22 T 22-04-2016 YE0433 7f651ae64bae80d437ed08cb9708e7eb 495 SUPERFAMILY SSF47794 429 492 1.88E-17 T 22-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 YE0433 7f651ae64bae80d437ed08cb9708e7eb 495 SUPERFAMILY SSF47794 355 415 1.52E-16 T 22-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 YE0433 7f651ae64bae80d437ed08cb9708e7eb 495 SMART SM00316 133 200 3.9E-9 T 22-04-2016 IPR022967 RNA-binding domain, S1 YE0433 7f651ae64bae80d437ed08cb9708e7eb 495 SUPERFAMILY SSF54814 279 342 6.54E-15 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 YE0433 7f651ae64bae80d437ed08cb9708e7eb 495 Gene3D G3DSA:3.30.300.20 199 277 2.0E-34 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta YE0433 7f651ae64bae80d437ed08cb9708e7eb 495 Pfam PF13184 NusA-like KH domain 230 297 1.1E-27 T 22-04-2016 IPR025249 KH domain, NusA-like GO:0003723 YE0433 7f651ae64bae80d437ed08cb9708e7eb 495 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 1.3E-131 T 22-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 YE0433 7f651ae64bae80d437ed08cb9708e7eb 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 441 489 4.2E-18 T 22-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication YE0433 7f651ae64bae80d437ed08cb9708e7eb 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 365 414 5.9E-21 T 22-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication YE0433 7f651ae64bae80d437ed08cb9708e7eb 495 PANTHER PTHR22648 1 448 3.5E-189 T 22-04-2016 YE0433 7f651ae64bae80d437ed08cb9708e7eb 495 Pfam PF08529 NusA N-terminal domain 4 123 2.8E-37 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 YE0433 7f651ae64bae80d437ed08cb9708e7eb 495 SUPERFAMILY SSF54814 201 278 2.68E-29 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 YE0433 7f651ae64bae80d437ed08cb9708e7eb 495 SUPERFAMILY SSF50249 133 199 2.11E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE0433 7f651ae64bae80d437ed08cb9708e7eb 495 Pfam PF14520 Helix-hairpin-helix domain 432 486 1.9E-9 T 22-04-2016 YE0433 7f651ae64bae80d437ed08cb9708e7eb 495 SUPERFAMILY SSF69705 1 126 2.62E-42 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 YE0433 7f651ae64bae80d437ed08cb9708e7eb 495 Gene3D G3DSA:3.30.1480.10 1 124 1.6E-46 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 YE0433 7f651ae64bae80d437ed08cb9708e7eb 495 SMART SM00322 230 293 17.0 T 22-04-2016 IPR004087 K Homology domain GO:0003676 YE0433 7f651ae64bae80d437ed08cb9708e7eb 495 SMART SM00322 301 358 0.19 T 22-04-2016 IPR004087 K Homology domain GO:0003676 YE0433 7f651ae64bae80d437ed08cb9708e7eb 495 Gene3D G3DSA:1.10.150.20 429 493 9.2E-25 T 22-04-2016 YE0433 7f651ae64bae80d437ed08cb9708e7eb 495 Gene3D G3DSA:2.40.50.140 128 198 4.2E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE0433 7f651ae64bae80d437ed08cb9708e7eb 495 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 410 29.413 T 22-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 YE0433 7f651ae64bae80d437ed08cb9708e7eb 495 PANTHER PTHR22648:SF0 1 448 3.5E-189 T 22-04-2016 YE0433 7f651ae64bae80d437ed08cb9708e7eb 495 Gene3D G3DSA:3.30.300.20 278 346 4.1E-27 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta YE3285 45ef9a8584e7b7946d37b7ad6be18a17 319 SUPERFAMILY SSF55920 59 311 2.36E-89 T 22-04-2016 IPR000994 Peptidase M24, structural domain YE3285 45ef9a8584e7b7946d37b7ad6be18a17 319 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 224 242 - T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 YE3285 45ef9a8584e7b7946d37b7ad6be18a17 319 PRINTS PR00599 Methionine aminopeptidase-1 signature 148 164 2.4E-22 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase YE3285 45ef9a8584e7b7946d37b7ad6be18a17 319 PRINTS PR00599 Methionine aminopeptidase-1 signature 125 138 2.4E-22 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase YE3285 45ef9a8584e7b7946d37b7ad6be18a17 319 PRINTS PR00599 Methionine aminopeptidase-1 signature 249 261 2.4E-22 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase YE3285 45ef9a8584e7b7946d37b7ad6be18a17 319 PRINTS PR00599 Methionine aminopeptidase-1 signature 218 230 2.4E-22 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase YE3285 45ef9a8584e7b7946d37b7ad6be18a17 319 Gene3D G3DSA:3.90.230.10 59 313 3.1E-98 T 22-04-2016 IPR000994 Peptidase M24, structural domain YE3285 45ef9a8584e7b7946d37b7ad6be18a17 319 Pfam PF00557 Metallopeptidase family M24 69 298 6.0E-51 T 22-04-2016 IPR000994 Peptidase M24, structural domain YE3285 45ef9a8584e7b7946d37b7ad6be18a17 319 PANTHER PTHR10804:SF75 57 316 1.3E-188 T 22-04-2016 YE3285 45ef9a8584e7b7946d37b7ad6be18a17 319 PANTHER PTHR10804 57 316 1.3E-188 T 22-04-2016 YE3285 45ef9a8584e7b7946d37b7ad6be18a17 319 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 59 306 3.5E-108 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 YE3285 45ef9a8584e7b7946d37b7ad6be18a17 319 Hamap MF_01974 Methionine aminopeptidase [map]. 59 307 43.141 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 YE0048 96832eb3c9ce31300a618dbf6cb653bd 565 SUPERFAMILY SSF56091 30 312 1.1E-67 T 22-04-2016 YE0048 96832eb3c9ce31300a618dbf6cb653bd 565 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 318 393 9.0E-18 T 22-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 YE0048 96832eb3c9ce31300a618dbf6cb653bd 565 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 123 313 6.7E-20 T 22-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 YE0048 96832eb3c9ce31300a618dbf6cb653bd 565 Gene3D G3DSA:1.10.150.20 420 487 8.3E-7 T 22-04-2016 YE0048 96832eb3c9ce31300a618dbf6cb653bd 565 Hamap MF_01587 DNA ligase B [ligB]. 4 561 53.465 T 22-04-2016 IPR020923 DNA ligase B GO:0003911|GO:0006259 YE0048 96832eb3c9ce31300a618dbf6cb653bd 565 Gene3D G3DSA:2.40.50.140 315 387 4.5E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE0048 96832eb3c9ce31300a618dbf6cb653bd 565 PANTHER PTHR23389:SF7 6 504 8.0E-242 T 22-04-2016 YE0048 96832eb3c9ce31300a618dbf6cb653bd 565 SUPERFAMILY SSF50249 315 395 1.71E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE0048 96832eb3c9ce31300a618dbf6cb653bd 565 SUPERFAMILY SSF47781 403 559 8.89E-26 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 YE0048 96832eb3c9ce31300a618dbf6cb653bd 565 Gene3D G3DSA:3.30.470.30 134 251 2.8E-18 T 22-04-2016 YE0048 96832eb3c9ce31300a618dbf6cb653bd 565 PANTHER PTHR23389 6 504 8.0E-242 T 22-04-2016 YE0048 96832eb3c9ce31300a618dbf6cb653bd 565 SMART SM00532 34 433 2.7E-46 T 22-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 YE0048 96832eb3c9ce31300a618dbf6cb653bd 565 Gene3D G3DSA:1.10.287.610 37 74 4.0E-4 T 22-04-2016 YE2198 34e28747a9720657316c2719d815fdbe 324 PANTHER PTHR30126:SF6 1 309 6.9E-226 T 22-04-2016 YE2198 34e28747a9720657316c2719d815fdbe 324 Pfam PF03466 LysR substrate binding domain 92 288 9.8E-41 T 22-04-2016 IPR005119 LysR, substrate-binding YE2198 34e28747a9720657316c2719d815fdbe 324 Gene3D G3DSA:3.40.190.10 185 262 5.2E-32 T 22-04-2016 YE2198 34e28747a9720657316c2719d815fdbe 324 Gene3D G3DSA:3.40.190.10 92 184 1.6E-20 T 22-04-2016 YE2198 34e28747a9720657316c2719d815fdbe 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.7E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE2198 34e28747a9720657316c2719d815fdbe 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.7E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE2198 34e28747a9720657316c2719d815fdbe 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.7E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE2198 34e28747a9720657316c2719d815fdbe 324 PANTHER PTHR30126 1 309 6.9E-226 T 22-04-2016 YE2198 34e28747a9720657316c2719d815fdbe 324 SUPERFAMILY SSF46785 1 85 7.39E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2198 34e28747a9720657316c2719d815fdbe 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 63 1.4E-14 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE2198 34e28747a9720657316c2719d815fdbe 324 SUPERFAMILY SSF53850 91 322 2.23E-43 T 22-04-2016 YE2198 34e28747a9720657316c2719d815fdbe 324 Gene3D G3DSA:1.10.10.10 1 81 4.6E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0204 7fabbb594cfad9837f8c89d738462c40 616 Gene3D G3DSA:3.40.50.300 206 344 7.9E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0204 7fabbb594cfad9837f8c89d738462c40 616 SUPERFAMILY SSF47819 532 607 5.01E-26 T 22-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 YE0204 7fabbb594cfad9837f8c89d738462c40 616 Gene3D G3DSA:1.10.150.80 532 604 2.6E-23 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 YE0204 7fabbb594cfad9837f8c89d738462c40 616 SUPERFAMILY SSF52540 15 201 1.29E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0204 7fabbb594cfad9837f8c89d738462c40 616 SUPERFAMILY SSF52540 208 458 8.85E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0204 7fabbb594cfad9837f8c89d738462c40 616 PANTHER PTHR13710 13 616 0.0 T 22-04-2016 YE0204 7fabbb594cfad9837f8c89d738462c40 616 SMART SM00341 531 611 8.4E-28 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 YE0204 7fabbb594cfad9837f8c89d738462c40 616 Gene3D G3DSA:3.40.50.300 14 203 3.1E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0204 7fabbb594cfad9837f8c89d738462c40 616 Pfam PF16124 RecQ zinc-binding 343 404 5.8E-16 T 22-04-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain YE0204 7fabbb594cfad9837f8c89d738462c40 616 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 15 464 2.3E-200 T 22-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 YE0204 7fabbb594cfad9837f8c89d738462c40 616 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 14 603 1.0E-265 T 22-04-2016 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 YE0204 7fabbb594cfad9837f8c89d738462c40 616 Pfam PF09382 RQC domain 406 516 6.6E-37 T 22-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 YE0204 7fabbb594cfad9837f8c89d738462c40 616 Pfam PF00570 HRDC domain 535 601 1.3E-23 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 YE0204 7fabbb594cfad9837f8c89d738462c40 616 Gene3D G3DSA:1.10.10.10 345 516 1.7E-60 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0204 7fabbb594cfad9837f8c89d738462c40 616 PANTHER PTHR13710:SF81 13 616 0.0 T 22-04-2016 YE0204 7fabbb594cfad9837f8c89d738462c40 616 Pfam PF00270 DEAD/DEAH box helicase 28 185 9.8E-21 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YE0204 7fabbb594cfad9837f8c89d738462c40 616 Pfam PF00271 Helicase conserved C-terminal domain 227 331 4.9E-19 T 22-04-2016 IPR001650 Helicase, C-terminal YE0204 7fabbb594cfad9837f8c89d738462c40 616 SMART SM00956 411 514 6.1E-52 T 22-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 YE0204 7fabbb594cfad9837f8c89d738462c40 616 SMART SM00490 250 331 5.9E-28 T 22-04-2016 IPR001650 Helicase, C-terminal YE0204 7fabbb594cfad9837f8c89d738462c40 616 SMART SM00487 22 218 2.5E-32 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain YE2075 3b02721b449532de24e8e62a4041d2ca 251 PANTHER PTHR24567:SF28 5 248 2.6E-135 T 22-04-2016 YE2075 3b02721b449532de24e8e62a4041d2ca 251 PANTHER PTHR24567 5 248 2.6E-135 T 22-04-2016 YE2075 3b02721b449532de24e8e62a4041d2ca 251 Pfam PF00027 Cyclic nucleotide-binding domain 51 132 3.9E-15 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain YE2075 3b02721b449532de24e8e62a4041d2ca 251 Pfam PF13545 Crp-like helix-turn-helix domain 168 242 1.0E-16 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 YE2075 3b02721b449532de24e8e62a4041d2ca 251 SUPERFAMILY SSF51206 23 162 2.88E-31 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like YE2075 3b02721b449532de24e8e62a4041d2ca 251 ProSitePatterns PS00042 Crp-type HTH domain signature. 195 218 - T 22-04-2016 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 YE2075 3b02721b449532de24e8e62a4041d2ca 251 Gene3D G3DSA:1.10.10.10 170 244 3.0E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2075 3b02721b449532de24e8e62a4041d2ca 251 SMART SM00419 187 235 4.6E-13 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 YE2075 3b02721b449532de24e8e62a4041d2ca 251 SMART SM00100 30 151 9.7E-22 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain YE2075 3b02721b449532de24e8e62a4041d2ca 251 SUPERFAMILY SSF46785 165 245 3.21E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2075 3b02721b449532de24e8e62a4041d2ca 251 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 2.1E-11 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 YE2075 3b02721b449532de24e8e62a4041d2ca 251 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 2.1E-11 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 YE2075 3b02721b449532de24e8e62a4041d2ca 251 Gene3D G3DSA:2.60.120.10 18 169 8.6E-41 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YE2098 9b0242f34a57c8187d75825cbdcd3628 330 PANTHER PTHR10996 1 328 1.6E-177 T 22-04-2016 YE2098 9b0242f34a57c8187d75825cbdcd3628 330 PANTHER PTHR10996:SF161 1 328 1.6E-177 T 22-04-2016 YE2098 9b0242f34a57c8187d75825cbdcd3628 330 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 223 239 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YE2098 9b0242f34a57c8187d75825cbdcd3628 330 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 9 328 8.0E-33 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 YE2098 9b0242f34a57c8187d75825cbdcd3628 330 SUPERFAMILY SSF52283 2 135 2.08E-44 T 22-04-2016 YE2098 9b0242f34a57c8187d75825cbdcd3628 330 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 174 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YE2098 9b0242f34a57c8187d75825cbdcd3628 330 SUPERFAMILY SSF51735 102 298 1.14E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2098 9b0242f34a57c8187d75825cbdcd3628 330 Gene3D G3DSA:3.40.50.720 1 137 2.0E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2098 9b0242f34a57c8187d75825cbdcd3628 330 Gene3D G3DSA:3.40.50.720 138 305 9.0E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2098 9b0242f34a57c8187d75825cbdcd3628 330 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 297 2.5E-54 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 YE2098 9b0242f34a57c8187d75825cbdcd3628 330 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 194 216 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YE0053 c05e38c83b85abdd2f6ae6ac28ab24e8 664 Pfam PF00563 EAL domain 411 644 3.5E-67 T 22-04-2016 IPR001633 EAL domain YE0053 c05e38c83b85abdd2f6ae6ac28ab24e8 664 PANTHER PTHR33121:SF13 354 654 5.1E-81 T 22-04-2016 YE0053 c05e38c83b85abdd2f6ae6ac28ab24e8 664 PANTHER PTHR33121:SF13 212 230 5.1E-81 T 22-04-2016 YE0053 c05e38c83b85abdd2f6ae6ac28ab24e8 664 SMART SM00052 404 649 1.7E-112 T 22-04-2016 IPR001633 EAL domain YE0053 c05e38c83b85abdd2f6ae6ac28ab24e8 664 SMART SM00267 225 394 3.5E-61 T 22-04-2016 IPR000160 GGDEF domain YE0053 c05e38c83b85abdd2f6ae6ac28ab24e8 664 SUPERFAMILY SSF55073 242 396 1.18E-44 T 22-04-2016 IPR029787 Nucleotide cyclase YE0053 c05e38c83b85abdd2f6ae6ac28ab24e8 664 Gene3D G3DSA:3.20.20.450 408 656 4.3E-93 T 22-04-2016 IPR001633 EAL domain YE0053 c05e38c83b85abdd2f6ae6ac28ab24e8 664 SUPERFAMILY SSF55785 123 233 2.58E-13 T 22-04-2016 IPR000014 PAS domain YE0053 c05e38c83b85abdd2f6ae6ac28ab24e8 664 Gene3D G3DSA:3.30.70.270 238 402 3.6E-51 T 22-04-2016 YE0053 c05e38c83b85abdd2f6ae6ac28ab24e8 664 Pfam PF00990 Diguanylate cyclase, GGDEF domain 236 389 4.5E-44 T 22-04-2016 IPR000160 GGDEF domain YE0053 c05e38c83b85abdd2f6ae6ac28ab24e8 664 SMART SM00091 110 176 2.6E-4 T 22-04-2016 IPR000014 PAS domain YE0053 c05e38c83b85abdd2f6ae6ac28ab24e8 664 Pfam PF13426 PAS domain 122 224 1.1E-7 T 22-04-2016 IPR000014 PAS domain YE0053 c05e38c83b85abdd2f6ae6ac28ab24e8 664 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 114 232 3.3E-11 T 22-04-2016 IPR000014 PAS domain YE0053 c05e38c83b85abdd2f6ae6ac28ab24e8 664 PANTHER PTHR33121 354 654 5.1E-81 T 22-04-2016 YE0053 c05e38c83b85abdd2f6ae6ac28ab24e8 664 PANTHER PTHR33121 212 230 5.1E-81 T 22-04-2016 YE0053 c05e38c83b85abdd2f6ae6ac28ab24e8 664 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 234 392 4.5E-37 T 22-04-2016 IPR000160 GGDEF domain YE0053 c05e38c83b85abdd2f6ae6ac28ab24e8 664 Gene3D G3DSA:3.30.450.20 111 217 7.9E-17 T 22-04-2016 YE0053 c05e38c83b85abdd2f6ae6ac28ab24e8 664 SUPERFAMILY SSF141868 411 657 7.72E-86 T 22-04-2016 IPR001633 EAL domain YE0163 047eb8db566358deb1e62d8ac05fab2e 674 PANTHER PTHR11070 1 664 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 YE0163 047eb8db566358deb1e62d8ac05fab2e 674 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 666 0.0 T 22-04-2016 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 YE0163 047eb8db566358deb1e62d8ac05fab2e 674 Gene3D G3DSA:1.10.10.160 108 181 9.0E-23 T 22-04-2016 IPR013986 DExx box DNA helicase domain YE0163 047eb8db566358deb1e62d8ac05fab2e 674 SUPERFAMILY SSF52540 2 638 1.39E-160 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0163 047eb8db566358deb1e62d8ac05fab2e 674 Gene3D G3DSA:1.10.486.10 383 525 1.3E-37 T 22-04-2016 YE0163 047eb8db566358deb1e62d8ac05fab2e 674 PANTHER PTHR11070:SF19 1 664 0.0 T 22-04-2016 YE0163 047eb8db566358deb1e62d8ac05fab2e 674 Gene3D G3DSA:3.40.50.300 182 279 4.0E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0163 047eb8db566358deb1e62d8ac05fab2e 674 Gene3D G3DSA:3.40.50.300 2 104 4.0E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0163 047eb8db566358deb1e62d8ac05fab2e 674 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 1.8E-74 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 YE0163 047eb8db566358deb1e62d8ac05fab2e 674 Gene3D G3DSA:3.40.50.300 280 382 8.2E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0163 047eb8db566358deb1e62d8ac05fab2e 674 Gene3D G3DSA:3.40.50.300 550 640 8.2E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0163 047eb8db566358deb1e62d8ac05fab2e 674 Pfam PF13361 UvrD-like helicase C-terminal domain 271 613 4.8E-71 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 YE0163 047eb8db566358deb1e62d8ac05fab2e 674 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 668 40.989 T 22-04-2016 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 YE4092 bda288768bedb12270ac50257d59321e 487 PANTHER PTHR11614:SF89 48 342 7.1E-126 T 22-04-2016 YE4092 bda288768bedb12270ac50257d59321e 487 Pfam PF12146 Serine aminopeptidase, S33 118 237 5.9E-11 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 YE4092 bda288768bedb12270ac50257d59321e 487 Gene3D G3DSA:3.40.50.1820 111 342 5.4E-33 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE4092 bda288768bedb12270ac50257d59321e 487 SUPERFAMILY SSF53474 75 272 6.54E-25 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE4092 bda288768bedb12270ac50257d59321e 487 SUPERFAMILY SSF53474 302 342 6.54E-25 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE4092 bda288768bedb12270ac50257d59321e 487 PANTHER PTHR11614 48 342 7.1E-126 T 22-04-2016 YE3713 29e1bec8499d12655bbf032eb3a6219b 129 Hamap MF_00904 Modulator protein MzrA [mzrA]. 10 119 26.322 T 22-04-2016 IPR026574 Modulator protein MzrA YE3713 29e1bec8499d12655bbf032eb3a6219b 129 Pfam PF13721 SecD export protein N-terminal TM region 11 106 2.7E-21 T 22-04-2016 IPR027398 SecD export protein N-terminal TM domain YE1736 7222522d4ca26bcb5a8c528cbfcc11f3 265 PANTHER PTHR32552:SF23 58 265 2.6E-105 T 22-04-2016 YE1736 7222522d4ca26bcb5a8c528cbfcc11f3 265 Pfam PF00665 Integrase core domain 107 219 3.5E-23 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YE1736 7222522d4ca26bcb5a8c528cbfcc11f3 265 PANTHER PTHR32552 58 265 2.6E-105 T 22-04-2016 YE1736 7222522d4ca26bcb5a8c528cbfcc11f3 265 Gene3D G3DSA:3.30.420.10 102 258 9.8E-33 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE1736 7222522d4ca26bcb5a8c528cbfcc11f3 265 SUPERFAMILY SSF53098 104 260 6.37E-37 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE0305 7222522d4ca26bcb5a8c528cbfcc11f3 265 PANTHER PTHR32552:SF23 58 265 2.6E-105 T 22-04-2016 YE0305 7222522d4ca26bcb5a8c528cbfcc11f3 265 Pfam PF00665 Integrase core domain 107 219 3.5E-23 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YE0305 7222522d4ca26bcb5a8c528cbfcc11f3 265 PANTHER PTHR32552 58 265 2.6E-105 T 22-04-2016 YE0305 7222522d4ca26bcb5a8c528cbfcc11f3 265 Gene3D G3DSA:3.30.420.10 102 258 9.8E-33 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE0305 7222522d4ca26bcb5a8c528cbfcc11f3 265 SUPERFAMILY SSF53098 104 260 6.37E-37 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE1203 7222522d4ca26bcb5a8c528cbfcc11f3 265 PANTHER PTHR32552:SF23 58 265 2.6E-105 T 22-04-2016 YE1203 7222522d4ca26bcb5a8c528cbfcc11f3 265 Pfam PF00665 Integrase core domain 107 219 3.5E-23 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YE1203 7222522d4ca26bcb5a8c528cbfcc11f3 265 PANTHER PTHR32552 58 265 2.6E-105 T 22-04-2016 YE1203 7222522d4ca26bcb5a8c528cbfcc11f3 265 Gene3D G3DSA:3.30.420.10 102 258 9.8E-33 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE1203 7222522d4ca26bcb5a8c528cbfcc11f3 265 SUPERFAMILY SSF53098 104 260 6.37E-37 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE3170 7222522d4ca26bcb5a8c528cbfcc11f3 265 PANTHER PTHR32552:SF23 58 265 2.6E-105 T 22-04-2016 YE3170 7222522d4ca26bcb5a8c528cbfcc11f3 265 Pfam PF00665 Integrase core domain 107 219 3.5E-23 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YE3170 7222522d4ca26bcb5a8c528cbfcc11f3 265 PANTHER PTHR32552 58 265 2.6E-105 T 22-04-2016 YE3170 7222522d4ca26bcb5a8c528cbfcc11f3 265 Gene3D G3DSA:3.30.420.10 102 258 9.8E-33 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE3170 7222522d4ca26bcb5a8c528cbfcc11f3 265 SUPERFAMILY SSF53098 104 260 6.37E-37 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE3292 7222522d4ca26bcb5a8c528cbfcc11f3 265 PANTHER PTHR32552:SF23 58 265 2.6E-105 T 22-04-2016 YE3292 7222522d4ca26bcb5a8c528cbfcc11f3 265 Pfam PF00665 Integrase core domain 107 219 3.5E-23 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YE3292 7222522d4ca26bcb5a8c528cbfcc11f3 265 PANTHER PTHR32552 58 265 2.6E-105 T 22-04-2016 YE3292 7222522d4ca26bcb5a8c528cbfcc11f3 265 Gene3D G3DSA:3.30.420.10 102 258 9.8E-33 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE3292 7222522d4ca26bcb5a8c528cbfcc11f3 265 SUPERFAMILY SSF53098 104 260 6.37E-37 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE4138 dc6a887bb1e378a08a035dc61e1f5cdd 207 PIRSF PIRSF000349 1 207 7.9E-80 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YE4138 dc6a887bb1e378a08a035dc61e1f5cdd 207 PRINTS PR01703 Manganese superoxide dismutase signature 167 179 2.8E-27 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YE4138 dc6a887bb1e378a08a035dc61e1f5cdd 207 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 2.8E-27 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YE4138 dc6a887bb1e378a08a035dc61e1f5cdd 207 PRINTS PR01703 Manganese superoxide dismutase signature 73 86 2.8E-27 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YE4138 dc6a887bb1e378a08a035dc61e1f5cdd 207 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 2.8E-27 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YE4138 dc6a887bb1e378a08a035dc61e1f5cdd 207 PRINTS PR01703 Manganese superoxide dismutase signature 124 132 2.8E-27 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YE4138 dc6a887bb1e378a08a035dc61e1f5cdd 207 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 169 176 - T 22-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YE4138 dc6a887bb1e378a08a035dc61e1f5cdd 207 Gene3D G3DSA:1.10.287.990 20 90 1.2E-31 T 22-04-2016 YE4138 dc6a887bb1e378a08a035dc61e1f5cdd 207 PANTHER PTHR11404 1 207 2.4E-107 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YE4138 dc6a887bb1e378a08a035dc61e1f5cdd 207 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 96 202 1.2E-41 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YE4138 dc6a887bb1e378a08a035dc61e1f5cdd 207 SUPERFAMILY SSF46609 1 90 5.63E-36 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YE4138 dc6a887bb1e378a08a035dc61e1f5cdd 207 SUPERFAMILY SSF54719 95 206 3.4E-45 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YE4138 dc6a887bb1e378a08a035dc61e1f5cdd 207 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 89 1.7E-31 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YE3348 8fce39f46e32ff47e92e465a743bb2c7 493 SUPERFAMILY SSF52540 95 483 2.56E-97 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3348 8fce39f46e32ff47e92e465a743bb2c7 493 PANTHER PTHR30258:SF9 3 493 5.9E-255 T 22-04-2016 YE3348 8fce39f46e32ff47e92e465a743bb2c7 493 SMART SM00382 239 360 0.002 T 22-04-2016 IPR003593 AAA+ ATPase domain YE3348 8fce39f46e32ff47e92e465a743bb2c7 493 Pfam PF00437 Type II/IV secretion system protein 113 378 8.7E-81 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 YE3348 8fce39f46e32ff47e92e465a743bb2c7 493 Gene3D G3DSA:3.40.50.300 217 484 3.2E-94 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3348 8fce39f46e32ff47e92e465a743bb2c7 493 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 3 484 1.5E-194 T 22-04-2016 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 YE3348 8fce39f46e32ff47e92e465a743bb2c7 493 Gene3D G3DSA:3.30.450.90 89 211 3.6E-48 T 22-04-2016 YE3348 8fce39f46e32ff47e92e465a743bb2c7 493 PANTHER PTHR30258 3 493 5.9E-255 T 22-04-2016 YE3348 8fce39f46e32ff47e92e465a743bb2c7 493 SUPERFAMILY SSF160246 2 65 3.14E-13 T 22-04-2016 YE3348 8fce39f46e32ff47e92e465a743bb2c7 493 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 306 320 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 YE3271 2399f7b8915e405612043d4c860fda4c 394 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 15 391 5.6E-170 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 YE3271 2399f7b8915e405612043d4c860fda4c 394 Pfam PF02684 Lipid-A-disaccharide synthetase 20 388 8.1E-143 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 YE3271 2399f7b8915e405612043d4c860fda4c 394 PANTHER PTHR30372:SF0 7 391 6.5E-145 T 22-04-2016 YE3271 2399f7b8915e405612043d4c860fda4c 394 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 17 393 42.341 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 YE3271 2399f7b8915e405612043d4c860fda4c 394 PANTHER PTHR30372 7 391 6.5E-145 T 22-04-2016 YE3271 2399f7b8915e405612043d4c860fda4c 394 SUPERFAMILY SSF53756 20 361 6.8E-26 T 22-04-2016 YE2622 05260d99a4d3e7999425b9028f08a1f9 673 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 149 1.8E-14 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YE2622 05260d99a4d3e7999425b9028f08a1f9 673 Pfam PF00593 TonB dependent receptor 434 669 1.5E-29 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YE2622 05260d99a4d3e7999425b9028f08a1f9 673 SUPERFAMILY SSF56935 19 672 1.28E-93 T 22-04-2016 YE2622 05260d99a4d3e7999425b9028f08a1f9 673 Gene3D G3DSA:2.40.170.20 153 672 1.3E-73 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YE2622 05260d99a4d3e7999425b9028f08a1f9 673 Gene3D G3DSA:2.170.130.10 22 152 4.8E-25 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YE2622 05260d99a4d3e7999425b9028f08a1f9 673 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 50 672 6.4E-149 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 YE2622 05260d99a4d3e7999425b9028f08a1f9 673 PANTHER PTHR32552 1 672 3.5E-290 T 22-04-2016 YE2622 05260d99a4d3e7999425b9028f08a1f9 673 PANTHER PTHR32552:SF11 1 672 3.5E-290 T 22-04-2016 YE3027 f7e13e44f67196ed5fe611fe9e93d823 254 Gene3D G3DSA:1.20.1290.10 43 118 2.3E-8 T 22-04-2016 IPR029032 AhpD-like YE3027 f7e13e44f67196ed5fe611fe9e93d823 254 Gene3D G3DSA:1.20.1290.10 154 246 8.2E-11 T 22-04-2016 IPR029032 AhpD-like YE3027 f7e13e44f67196ed5fe611fe9e93d823 254 SUPERFAMILY SSF69118 34 240 1.15E-38 T 22-04-2016 IPR029032 AhpD-like YE3027 f7e13e44f67196ed5fe611fe9e93d823 254 Pfam PF02627 Carboxymuconolactone decarboxylase family 166 247 2.6E-10 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 YE1441 cdcb64cb0d70ca058ae18f025869aadd 190 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 189 4.9E-97 T 22-04-2016 IPR011897 Translation elongation factor P-like, YeiP YE1441 cdcb64cb0d70ca058ae18f025869aadd 190 PANTHER PTHR30053 1 190 6.6E-132 T 22-04-2016 YE1441 cdcb64cb0d70ca058ae18f025869aadd 190 PANTHER PTHR30053:SF5 1 190 6.6E-132 T 22-04-2016 YE1441 cdcb64cb0d70ca058ae18f025869aadd 190 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 4 61 9.3E-16 T 22-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 YE1441 cdcb64cb0d70ca058ae18f025869aadd 190 SUPERFAMILY SSF50104 1 64 4.63E-10 T 22-04-2016 IPR008991 Translation protein SH3-like domain YE1441 cdcb64cb0d70ca058ae18f025869aadd 190 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 124 1.2E-13 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 YE1441 cdcb64cb0d70ca058ae18f025869aadd 190 Gene3D G3DSA:2.40.50.140 67 131 6.7E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE1441 cdcb64cb0d70ca058ae18f025869aadd 190 SUPERFAMILY SSF50249 67 130 4.71E-11 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE1441 cdcb64cb0d70ca058ae18f025869aadd 190 PIRSF PIRSF005901 1 190 3.7E-59 T 22-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 YE1441 cdcb64cb0d70ca058ae18f025869aadd 190 Gene3D G3DSA:2.40.50.140 132 189 2.7E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE1441 cdcb64cb0d70ca058ae18f025869aadd 190 Gene3D G3DSA:2.30.30.30 1 64 2.6E-14 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 YE1441 cdcb64cb0d70ca058ae18f025869aadd 190 Pfam PF09285 Elongation factor P, C-terminal 133 188 2.1E-17 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 YE1441 cdcb64cb0d70ca058ae18f025869aadd 190 SUPERFAMILY SSF50249 132 189 2.4E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE1441 cdcb64cb0d70ca058ae18f025869aadd 190 SMART SM01185 69 125 7.3E-14 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 YE1441 cdcb64cb0d70ca058ae18f025869aadd 190 ProSitePatterns PS01275 Elongation factor P signature. 154 173 - T 22-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 YE1441 cdcb64cb0d70ca058ae18f025869aadd 190 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 189 45.461 T 22-04-2016 IPR011897 Translation elongation factor P-like, YeiP YE1441 cdcb64cb0d70ca058ae18f025869aadd 190 SMART SM00841 133 188 4.8E-24 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 YE0692 32207ea9fa6f134b38efcec6216d41cb 154 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 28 136 2.9E-20 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 YE0692 32207ea9fa6f134b38efcec6216d41cb 154 PANTHER PTHR30417 1 153 7.9E-76 T 22-04-2016 YE0692 32207ea9fa6f134b38efcec6216d41cb 154 Gene3D G3DSA:3.40.80.10 1 148 2.0E-61 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 YE0692 32207ea9fa6f134b38efcec6216d41cb 154 SMART SM00644 1 135 3.5E-41 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 YE0692 32207ea9fa6f134b38efcec6216d41cb 154 PANTHER PTHR30417:SF4 1 153 7.9E-76 T 22-04-2016 YE0692 32207ea9fa6f134b38efcec6216d41cb 154 SUPERFAMILY SSF55846 1 148 1.02E-59 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 YE0434 d57bbfacf4ee6a93154d316cfe4b5de0 892 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 889 17.533 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 YE0434 d57bbfacf4ee6a93154d316cfe4b5de0 892 PANTHER PTHR23115 367 719 2.7E-213 T 22-04-2016 YE0434 d57bbfacf4ee6a93154d316cfe4b5de0 892 PANTHER PTHR23115 743 891 2.7E-213 T 22-04-2016 YE0434 d57bbfacf4ee6a93154d316cfe4b5de0 892 SUPERFAMILY SSF50447 792 889 5.3E-35 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain YE0434 d57bbfacf4ee6a93154d316cfe4b5de0 892 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 306 891 5.1E-288 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 YE0434 d57bbfacf4ee6a93154d316cfe4b5de0 892 PANTHER PTHR23115:SF184 367 719 2.7E-213 T 22-04-2016 YE0434 d57bbfacf4ee6a93154d316cfe4b5de0 892 PANTHER PTHR23115:SF184 743 891 2.7E-213 T 22-04-2016 YE0434 d57bbfacf4ee6a93154d316cfe4b5de0 892 Gene3D G3DSA:3.40.50.10050 691 770 3.1E-24 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 YE0434 d57bbfacf4ee6a93154d316cfe4b5de0 892 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 57 94 3.4E-16 T 22-04-2016 IPR013575 Initiation factor 2 associated domain, bacterial YE0434 d57bbfacf4ee6a93154d316cfe4b5de0 892 Gene3D G3DSA:3.40.50.300 389 551 1.2E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0434 d57bbfacf4ee6a93154d316cfe4b5de0 892 Pfam PF03144 Elongation factor Tu domain 2 812 879 7.8E-8 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 YE0434 d57bbfacf4ee6a93154d316cfe4b5de0 892 SUPERFAMILY SSF52156 669 798 1.09E-37 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 YE0434 d57bbfacf4ee6a93154d316cfe4b5de0 892 Pfam PF00009 Elongation factor Tu GTP binding domain 395 552 7.7E-35 T 22-04-2016 YE0434 d57bbfacf4ee6a93154d316cfe4b5de0 892 SMART SM00173 388 557 0.0029 T 22-04-2016 YE0434 d57bbfacf4ee6a93154d316cfe4b5de0 892 Pfam PF11987 Translation-initiation factor 2 676 781 2.0E-36 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 YE0434 d57bbfacf4ee6a93154d316cfe4b5de0 892 SUPERFAMILY SSF52540 391 559 3.42E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0434 d57bbfacf4ee6a93154d316cfe4b5de0 892 SUPERFAMILY SSF50447 565 646 4.52E-23 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain YE0434 d57bbfacf4ee6a93154d316cfe4b5de0 892 ProSitePatterns PS01176 Initiation factor 2 signature. 842 864 - T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 YE0434 d57bbfacf4ee6a93154d316cfe4b5de0 892 Gene3D G3DSA:2.40.30.10 793 890 3.5E-40 T 22-04-2016 YE0434 d57bbfacf4ee6a93154d316cfe4b5de0 892 Gene3D G3DSA:3.30.56.50 2 50 4.6E-24 T 22-04-2016 YE0434 d57bbfacf4ee6a93154d316cfe4b5de0 892 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 394 549 1.4E-30 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 YE0434 d57bbfacf4ee6a93154d316cfe4b5de0 892 Gene3D G3DSA:2.40.30.10 565 655 4.6E-21 T 22-04-2016 YE0434 d57bbfacf4ee6a93154d316cfe4b5de0 892 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 5.1E-8 T 22-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal YE0434 d57bbfacf4ee6a93154d316cfe4b5de0 892 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 314 364 2.4E-14 T 22-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal YE0434 d57bbfacf4ee6a93154d316cfe4b5de0 892 SUPERFAMILY SSF46955 3 50 2.2E-13 T 22-04-2016 IPR009061 Putative DNA-binding domain YE3077 565f5aeb5366dbd4ab0af6508e83aa44 282 PANTHER PTHR11927:SF9 157 251 1.9E-20 T 22-04-2016 YE3077 565f5aeb5366dbd4ab0af6508e83aa44 282 PANTHER PTHR11927 157 251 1.9E-20 T 22-04-2016 IPR002516 Glycosyl transferase, family 11 GO:0005975|GO:0008107|GO:0016020 KEGG: 00601+2.4.1.69|KEGG: 00603+2.4.1.69|UniPathway: UPA00378 YE3077 565f5aeb5366dbd4ab0af6508e83aa44 282 Pfam PF01531 Glycosyl transferase family 11 2 280 2.5E-113 T 22-04-2016 IPR002516 Glycosyl transferase, family 11 GO:0005975|GO:0008107|GO:0016020 KEGG: 00601+2.4.1.69|KEGG: 00603+2.4.1.69|UniPathway: UPA00378 YE1582 962254e4647824996a1b85d36250c165 168 SUPERFAMILY SSF52540 32 146 1.38E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1582 962254e4647824996a1b85d36250c165 168 Pfam PF03846 Cell division inhibitor SulA 10 120 5.3E-53 T 22-04-2016 IPR004596 Cell division suppressor protein, SulA GO:0009276|GO:0009432|GO:0051782 YE1582 962254e4647824996a1b85d36250c165 168 Hamap MF_01179 Cell division inhibitor SulA [sulA]. 1 168 40.229 T 22-04-2016 IPR004596 Cell division suppressor protein, SulA GO:0009276|GO:0009432|GO:0051782 YE1582 962254e4647824996a1b85d36250c165 168 PIRSF PIRSF003093 1 168 1.2E-82 T 22-04-2016 IPR004596 Cell division suppressor protein, SulA GO:0009276|GO:0009432|GO:0051782 YE1582 962254e4647824996a1b85d36250c165 168 Gene3D G3DSA:3.40.50.300 32 146 2.5E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1582 962254e4647824996a1b85d36250c165 168 PANTHER PTHR35369 1 168 4.7E-52 T 22-04-2016 YE1333 b01dc657ed9252ffa3b56cbbc73c9885 717 PIRSF PIRSF006107 1 714 0.0 T 22-04-2016 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 YE1333 b01dc657ed9252ffa3b56cbbc73c9885 717 PANTHER PTHR23406:SF3 178 716 7.5E-58 T 22-04-2016 YE1333 b01dc657ed9252ffa3b56cbbc73c9885 717 SUPERFAMILY SSF75138 229 353 1.24E-25 T 22-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like YE1333 b01dc657ed9252ffa3b56cbbc73c9885 717 Pfam PF07085 DRTGG domain 233 344 1.4E-28 T 22-04-2016 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 YE1333 b01dc657ed9252ffa3b56cbbc73c9885 717 Gene3D G3DSA:3.40.50.10750 524 682 3.3E-67 T 22-04-2016 YE1333 b01dc657ed9252ffa3b56cbbc73c9885 717 SUPERFAMILY SSF53659 392 709 6.17E-94 T 22-04-2016 YE1333 b01dc657ed9252ffa3b56cbbc73c9885 717 SUPERFAMILY SSF52540 3 240 1.86E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1333 b01dc657ed9252ffa3b56cbbc73c9885 717 PANTHER PTHR23406 178 716 7.5E-58 T 22-04-2016 YE1333 b01dc657ed9252ffa3b56cbbc73c9885 717 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 406 706 2.9E-136 T 22-04-2016 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 YE1333 b01dc657ed9252ffa3b56cbbc73c9885 717 Pfam PF01515 Phosphate acetyl/butaryl transferase 391 706 1.1E-127 T 22-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 YE1333 b01dc657ed9252ffa3b56cbbc73c9885 717 Gene3D G3DSA:3.40.1390.20 225 365 8.5E-31 T 22-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like YE1333 b01dc657ed9252ffa3b56cbbc73c9885 717 Pfam PF13500 AAA domain 3 229 1.5E-51 T 22-04-2016 YE1333 b01dc657ed9252ffa3b56cbbc73c9885 717 Gene3D G3DSA:3.40.50.300 3 222 3.5E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1923 2ab5fe465c5efd30064a9de633197c3c 104 PANTHER PTHR36924:SF2 1 88 1.1E-20 T 22-04-2016 YE1923 2ab5fe465c5efd30064a9de633197c3c 104 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 3 81 2.1E-26 T 22-04-2016 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 YE1923 2ab5fe465c5efd30064a9de633197c3c 104 PANTHER PTHR36924 1 88 1.1E-20 T 22-04-2016 YE1923 2ab5fe465c5efd30064a9de633197c3c 104 Pfam PF01381 Helix-turn-helix 15 59 4.1E-9 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YE1923 2ab5fe465c5efd30064a9de633197c3c 104 SMART SM00530 12 68 7.8E-6 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YE1923 2ab5fe465c5efd30064a9de633197c3c 104 SUPERFAMILY SSF47413 8 89 4.1E-21 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE1923 2ab5fe465c5efd30064a9de633197c3c 104 Gene3D G3DSA:1.10.260.40 1 81 4.5E-29 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE2410 7b1b46e586382655f386918b5e525393 319 SUPERFAMILY SSF55347 135 276 1.96E-47 T 22-04-2016 YE2410 7b1b46e586382655f386918b5e525393 319 Gene3D G3DSA:3.30.360.10 141 316 4.6E-70 T 22-04-2016 YE2410 7b1b46e586382655f386918b5e525393 319 PANTHER PTHR22604 14 315 3.8E-139 T 22-04-2016 YE2410 7b1b46e586382655f386918b5e525393 319 SUPERFAMILY SSF51735 15 149 2.28E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2410 7b1b46e586382655f386918b5e525393 319 PANTHER PTHR22604:SF126 14 315 3.8E-139 T 22-04-2016 YE2410 7b1b46e586382655f386918b5e525393 319 Gene3D G3DSA:3.40.50.720 11 140 1.0E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2410 7b1b46e586382655f386918b5e525393 319 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 16 133 1.4E-26 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 YE2161 e64255ead6472768deb70504a5bb8610 383 SUPERFAMILY SSF53335 117 370 5.74E-78 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE2161 e64255ead6472768deb70504a5bb8610 383 PANTHER PTHR10108:SF795 305 371 1.7E-107 T 22-04-2016 YE2161 e64255ead6472768deb70504a5bb8610 383 PANTHER PTHR10108:SF795 30 289 1.7E-107 T 22-04-2016 YE2161 e64255ead6472768deb70504a5bb8610 383 PIRSF PIRSF003085 5 378 9.0E-126 T 22-04-2016 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 YE2161 e64255ead6472768deb70504a5bb8610 383 Gene3D G3DSA:3.40.50.150 117 371 1.2E-93 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE2161 e64255ead6472768deb70504a5bb8610 383 PANTHER PTHR10108 305 371 1.7E-107 T 22-04-2016 YE2161 e64255ead6472768deb70504a5bb8610 383 PANTHER PTHR10108 30 289 1.7E-107 T 22-04-2016 YE2161 e64255ead6472768deb70504a5bb8610 383 Pfam PF02353 Mycolic acid cyclopropane synthetase 108 368 5.0E-102 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE3191 476b7c1b9a1b45cdadbb625dc58163bb 185 SUPERFAMILY SSF53335 14 159 2.53E-15 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE3191 476b7c1b9a1b45cdadbb625dc58163bb 185 Gene3D G3DSA:3.40.50.150 32 153 7.4E-10 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE2680 320432637da747fca4068c41f133225d 454 SUPERFAMILY SSF69864 190 442 2.22E-79 T 22-04-2016 YE2680 320432637da747fca4068c41f133225d 454 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 17 25 - T 22-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YE2680 320432637da747fca4068c41f133225d 454 Pfam PF00764 Arginosuccinate synthase 16 410 8.8E-58 T 22-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YE2680 320432637da747fca4068c41f133225d 454 PANTHER PTHR11587:SF2 1 425 1.2E-179 T 22-04-2016 YE2680 320432637da747fca4068c41f133225d 454 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 129 140 - T 22-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YE2680 320432637da747fca4068c41f133225d 454 Gene3D G3DSA:3.40.50.620 4 174 5.5E-45 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YE2680 320432637da747fca4068c41f133225d 454 PANTHER PTHR11587 1 425 1.2E-179 T 22-04-2016 YE2680 320432637da747fca4068c41f133225d 454 Gene3D G3DSA:1.10.287.400 377 439 5.3E-34 T 22-04-2016 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail GO:0042803 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YE2680 320432637da747fca4068c41f133225d 454 Hamap MF_00581 Argininosuccinate synthase [argG]. 1 450 73.831 T 22-04-2016 IPR023437 Argininosuccinate synthase, type 2 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YE2680 320432637da747fca4068c41f133225d 454 SUPERFAMILY SSF52402 3 186 4.19E-35 T 22-04-2016 YE2680 320432637da747fca4068c41f133225d 454 Gene3D G3DSA:3.90.1260.10 175 372 2.0E-63 T 22-04-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YE2680 320432637da747fca4068c41f133225d 454 TIGRFAM TIGR00032 argG: argininosuccinate synthase 13 419 5.2E-166 T 22-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YE3206 4495045ec5198b4216fe69c587d979d8 486 PANTHER PTHR11014:SF54 204 279 6.8E-208 T 22-04-2016 YE3206 4495045ec5198b4216fe69c587d979d8 486 PANTHER PTHR11014:SF54 1 185 6.8E-208 T 22-04-2016 YE3206 4495045ec5198b4216fe69c587d979d8 486 PANTHER PTHR11014 204 279 6.8E-208 T 22-04-2016 YE3206 4495045ec5198b4216fe69c587d979d8 486 PANTHER PTHR11014 1 185 6.8E-208 T 22-04-2016 YE3206 4495045ec5198b4216fe69c587d979d8 486 PANTHER PTHR11014 330 486 6.8E-208 T 22-04-2016 YE3206 4495045ec5198b4216fe69c587d979d8 486 Pfam PF01546 Peptidase family M20/M25/M40 72 480 3.4E-20 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 YE3206 4495045ec5198b4216fe69c587d979d8 486 PIRSF PIRSF016599 1 485 9.3E-211 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 YE3206 4495045ec5198b4216fe69c587d979d8 486 Pfam PF07687 Peptidase dimerisation domain 200 292 2.4E-6 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain YE3206 4495045ec5198b4216fe69c587d979d8 486 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 8 482 6.5E-182 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 YE3206 4495045ec5198b4216fe69c587d979d8 486 PANTHER PTHR11014:SF54 330 486 6.8E-208 T 22-04-2016 YE3206 4495045ec5198b4216fe69c587d979d8 486 PRINTS PR00934 X-His dipeptidase (M25) signature 159 177 4.9E-98 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 YE3206 4495045ec5198b4216fe69c587d979d8 486 PRINTS PR00934 X-His dipeptidase (M25) signature 251 270 4.9E-98 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 YE3206 4495045ec5198b4216fe69c587d979d8 486 PRINTS PR00934 X-His dipeptidase (M25) signature 80 99 4.9E-98 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 YE3206 4495045ec5198b4216fe69c587d979d8 486 PRINTS PR00934 X-His dipeptidase (M25) signature 363 381 4.9E-98 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 YE3206 4495045ec5198b4216fe69c587d979d8 486 PRINTS PR00934 X-His dipeptidase (M25) signature 135 152 4.9E-98 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 YE3206 4495045ec5198b4216fe69c587d979d8 486 PRINTS PR00934 X-His dipeptidase (M25) signature 206 223 4.9E-98 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 YE3206 4495045ec5198b4216fe69c587d979d8 486 PRINTS PR00934 X-His dipeptidase (M25) signature 450 472 4.9E-98 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 YE3206 4495045ec5198b4216fe69c587d979d8 486 PRINTS PR00934 X-His dipeptidase (M25) signature 101 119 4.9E-98 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 YE3206 4495045ec5198b4216fe69c587d979d8 486 PRINTS PR00934 X-His dipeptidase (M25) signature 428 444 4.9E-98 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 YE3206 4495045ec5198b4216fe69c587d979d8 486 Gene3D G3DSA:3.40.630.10 3 181 3.2E-109 T 22-04-2016 YE3206 4495045ec5198b4216fe69c587d979d8 486 Gene3D G3DSA:3.40.630.10 397 484 3.2E-109 T 22-04-2016 YE3206 4495045ec5198b4216fe69c587d979d8 486 SUPERFAMILY SSF53187 10 182 2.62E-65 T 22-04-2016 YE3206 4495045ec5198b4216fe69c587d979d8 486 SUPERFAMILY SSF53187 397 482 2.62E-65 T 22-04-2016 YE1095 d63a3ae288108693ceeb20c6931176df 278 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 99 110 2.2E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE1095 d63a3ae288108693ceeb20c6931176df 278 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 161 2.2E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE1095 d63a3ae288108693ceeb20c6931176df 278 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 173 192 2.2E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE1095 d63a3ae288108693ceeb20c6931176df 278 Gene3D G3DSA:3.40.50.720 22 275 1.3E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain YE1095 d63a3ae288108693ceeb20c6931176df 278 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 160 188 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YE1095 d63a3ae288108693ceeb20c6931176df 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 163 6.8E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE1095 d63a3ae288108693ceeb20c6931176df 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 192 6.8E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE1095 d63a3ae288108693ceeb20c6931176df 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 239 259 6.8E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE1095 d63a3ae288108693ceeb20c6931176df 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 23 40 6.8E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE1095 d63a3ae288108693ceeb20c6931176df 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 99 110 6.8E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE1095 d63a3ae288108693ceeb20c6931176df 278 PANTHER PTHR24322 26 157 7.0E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE1095 d63a3ae288108693ceeb20c6931176df 278 PANTHER PTHR24322:SF625 173 205 7.0E-40 T 22-04-2016 YE1095 d63a3ae288108693ceeb20c6931176df 278 PANTHER PTHR24322:SF625 26 157 7.0E-40 T 22-04-2016 YE1095 d63a3ae288108693ceeb20c6931176df 278 Pfam PF00106 short chain dehydrogenase 22 216 7.3E-46 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE1095 d63a3ae288108693ceeb20c6931176df 278 SUPERFAMILY SSF51735 22 277 1.01E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain YE1095 d63a3ae288108693ceeb20c6931176df 278 PANTHER PTHR24322 173 205 7.0E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE3885 65cbdc9615d1442b88f4ab198ec5a7ce 190 Gene3D G3DSA:3.90.870.10 3 190 6.7E-55 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain YE3885 65cbdc9615d1442b88f4ab198ec5a7ce 190 Pfam PF01300 Telomere recombination 15 165 6.1E-43 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 YE3885 65cbdc9615d1442b88f4ab198ec5a7ce 190 PANTHER PTHR17490 4 185 1.9E-110 T 22-04-2016 YE3885 65cbdc9615d1442b88f4ab198ec5a7ce 190 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 7 188 41.423 T 22-04-2016 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 YE3885 65cbdc9615d1442b88f4ab198ec5a7ce 190 PANTHER PTHR17490:SF8 4 185 1.9E-110 T 22-04-2016 YE3885 65cbdc9615d1442b88f4ab198ec5a7ce 190 SUPERFAMILY SSF55821 6 186 5.49E-55 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain YE1227 2159b92ac54a8378597e5bc739527ad4 246 Gene3D G3DSA:2.40.50.40 139 206 3.0E-23 T 22-04-2016 YE1227 2159b92ac54a8378597e5bc739527ad4 246 SMART SM00850 147 245 1.3E-34 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 YE1227 2159b92ac54a8378597e5bc739527ad4 246 SMART SM00448 1 112 6.8E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE1227 2159b92ac54a8378597e5bc739527ad4 246 PANTHER PTHR26402 1 245 7.7E-43 T 22-04-2016 YE1227 2159b92ac54a8378597e5bc739527ad4 246 Gene3D G3DSA:2.20.25.10 208 246 2.2E-13 T 22-04-2016 YE1227 2159b92ac54a8378597e5bc739527ad4 246 PANTHER PTHR26402:SF472 1 245 7.7E-43 T 22-04-2016 YE1227 2159b92ac54a8378597e5bc739527ad4 246 Gene3D G3DSA:3.40.50.2300 3 128 1.5E-28 T 22-04-2016 YE1227 2159b92ac54a8378597e5bc739527ad4 246 SUPERFAMILY SSF52172 2 132 4.13E-26 T 22-04-2016 IPR011006 CheY-like superfamily YE1227 2159b92ac54a8378597e5bc739527ad4 246 Pfam PF00072 Response regulator receiver domain 4 112 8.4E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE1227 2159b92ac54a8378597e5bc739527ad4 246 Pfam PF04397 LytTr DNA-binding domain 148 244 4.6E-30 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 YE3380 0b902f387ad2c6fbdd4bd2bd125a996c 299 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 5 299 64.232 T 22-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 YE3380 0b902f387ad2c6fbdd4bd2bd125a996c 299 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 10 299 5.7E-119 T 22-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 YE3380 0b902f387ad2c6fbdd4bd2bd125a996c 299 Gene3D G3DSA:1.10.443.10 114 289 2.4E-58 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 YE3380 0b902f387ad2c6fbdd4bd2bd125a996c 299 Gene3D G3DSA:1.10.150.130 7 100 7.5E-29 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal YE3380 0b902f387ad2c6fbdd4bd2bd125a996c 299 PANTHER PTHR30349 8 299 6.7E-129 T 22-04-2016 YE3380 0b902f387ad2c6fbdd4bd2bd125a996c 299 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 5 299 31.366 T 22-04-2016 IPR023009 Tyrosine recombinase XerC/XerD YE3380 0b902f387ad2c6fbdd4bd2bd125a996c 299 PANTHER PTHR30349:SF5 8 299 6.7E-129 T 22-04-2016 YE3380 0b902f387ad2c6fbdd4bd2bd125a996c 299 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 9 91 5.3E-24 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 YE3380 0b902f387ad2c6fbdd4bd2bd125a996c 299 SUPERFAMILY SSF47823 5 101 1.69E-36 T 22-04-2016 IPR010998 Integrase, Lambda-type, N-terminal YE3380 0b902f387ad2c6fbdd4bd2bd125a996c 299 SUPERFAMILY SSF56349 107 297 1.27E-57 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YE3380 0b902f387ad2c6fbdd4bd2bd125a996c 299 Pfam PF00589 Phage integrase family 114 285 6.6E-56 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 YE1853 a253e12f3152fca11cfe774d7d807763 129 PIRSF PIRSF021320 2 129 1.7E-40 T 22-04-2016 IPR009326 Protein of unknown function DUF984 YE1853 a253e12f3152fca11cfe774d7d807763 129 PANTHER PTHR39203 1 129 7.5E-47 T 22-04-2016 YE1853 a253e12f3152fca11cfe774d7d807763 129 Pfam PF04266 ASCH domain 19 126 3.6E-21 T 22-04-2016 IPR007374 ASCH domain YE1853 a253e12f3152fca11cfe774d7d807763 129 Gene3D G3DSA:3.10.400.10 2 128 4.1E-47 T 22-04-2016 YE1853 a253e12f3152fca11cfe774d7d807763 129 SMART SM01022 14 127 6.0E-35 T 22-04-2016 IPR007374 ASCH domain YE1853 a253e12f3152fca11cfe774d7d807763 129 SUPERFAMILY SSF88697 3 127 8.45E-43 T 22-04-2016 IPR015947 PUA-like domain YE0489 a26ebc65d00d487bb2def2d7cffcbf45 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 274 5.2E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE0489 a26ebc65d00d487bb2def2d7cffcbf45 277 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 6 53 7.1E-11 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YE0489 a26ebc65d00d487bb2def2d7cffcbf45 277 PANTHER PTHR30465 5 274 2.3E-100 T 22-04-2016 YE0489 a26ebc65d00d487bb2def2d7cffcbf45 277 Gene3D G3DSA:1.10.3720.10 67 274 1.6E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE0489 a26ebc65d00d487bb2def2d7cffcbf45 277 PANTHER PTHR30465:SF10 5 274 2.3E-100 T 22-04-2016 YE0489 a26ebc65d00d487bb2def2d7cffcbf45 277 SUPERFAMILY SSF161098 71 256 1.7E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE0411 888e57d62b560f58215bb8c41bc20e61 461 Gene3D G3DSA:3.90.190.20 313 450 4.8E-36 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YE0411 888e57d62b560f58215bb8c41bc20e61 461 Pfam PF02875 Mur ligase family, glutamate ligase domain 312 360 5.5E-9 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YE0411 888e57d62b560f58215bb8c41bc20e61 461 Gene3D G3DSA:3.40.1190.10 92 312 3.2E-82 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YE0411 888e57d62b560f58215bb8c41bc20e61 461 SUPERFAMILY SSF53623 95 308 4.32E-49 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YE0411 888e57d62b560f58215bb8c41bc20e61 461 Gene3D G3DSA:3.40.50.720 1 90 8.1E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain YE0411 888e57d62b560f58215bb8c41bc20e61 461 SUPERFAMILY SSF51984 1 90 4.58E-24 T 22-04-2016 YE0411 888e57d62b560f58215bb8c41bc20e61 461 PANTHER PTHR23135:SF17 1 440 0.0 T 22-04-2016 YE0411 888e57d62b560f58215bb8c41bc20e61 461 PANTHER PTHR23135 1 440 0.0 T 22-04-2016 YE0411 888e57d62b560f58215bb8c41bc20e61 461 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 449 3.1E-257 T 22-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 YE0411 888e57d62b560f58215bb8c41bc20e61 461 Pfam PF08245 Mur ligase middle domain 108 291 2.2E-18 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YE0411 888e57d62b560f58215bb8c41bc20e61 461 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 450 59.219 T 22-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 YE0411 888e57d62b560f58215bb8c41bc20e61 461 Pfam PF01225 Mur ligase family, catalytic domain 2 98 4.4E-19 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 YE0411 888e57d62b560f58215bb8c41bc20e61 461 SUPERFAMILY SSF53244 312 449 1.2E-35 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YE0359 a55b9841b2bf1d6b9e20d0db396b0522 104 PANTHER PTHR30561 1 104 4.9E-54 T 22-04-2016 YE0359 a55b9841b2bf1d6b9e20d0db396b0522 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 9.0E-33 T 22-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 YE0359 a55b9841b2bf1d6b9e20d0db396b0522 104 SUPERFAMILY SSF103481 5 103 3.14E-21 T 22-04-2016 YE0359 a55b9841b2bf1d6b9e20d0db396b0522 104 PANTHER PTHR30561:SF0 1 104 4.9E-54 T 22-04-2016 YE2865 ee8730df0f2f2287f3adab4b7d379a6d 310 Gene3D G3DSA:3.40.190.10 25 137 1.2E-58 T 22-04-2016 YE2865 ee8730df0f2f2287f3adab4b7d379a6d 310 Gene3D G3DSA:3.40.190.10 258 309 1.2E-58 T 22-04-2016 YE2865 ee8730df0f2f2287f3adab4b7d379a6d 310 PANTHER PTHR30177:SF12 30 308 7.2E-127 T 22-04-2016 YE2865 ee8730df0f2f2287f3adab4b7d379a6d 310 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 29 304 2.7E-56 T 22-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 YE2865 ee8730df0f2f2287f3adab4b7d379a6d 310 PANTHER PTHR30177 30 308 7.2E-127 T 22-04-2016 YE2865 ee8730df0f2f2287f3adab4b7d379a6d 310 Gene3D G3DSA:3.40.190.120 138 245 6.2E-28 T 22-04-2016 YE2865 ee8730df0f2f2287f3adab4b7d379a6d 310 SUPERFAMILY SSF53850 29 308 3.51E-61 T 22-04-2016 YE1830 b77cba79c4cc8bbb664fbc27a11fcdad 610 PANTHER PTHR30562:SF1 8 608 1.7E-303 T 22-04-2016 YE1830 b77cba79c4cc8bbb664fbc27a11fcdad 610 Hamap MF_00203 UvrABC system protein C [uvrC]. 4 607 29.858 T 22-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 YE1830 b77cba79c4cc8bbb664fbc27a11fcdad 610 Pfam PF01541 GIY-YIG catalytic domain 18 93 9.4E-13 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily YE1830 b77cba79c4cc8bbb664fbc27a11fcdad 610 SMART SM00465 17 98 5.9E-23 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily YE1830 b77cba79c4cc8bbb664fbc27a11fcdad 610 SUPERFAMILY SSF82771 17 100 4.84E-25 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily YE1830 b77cba79c4cc8bbb664fbc27a11fcdad 610 Gene3D G3DSA:4.10.860.10 183 243 6.8E-20 T 22-04-2016 IPR001943 UVR domain GO:0005515 YE1830 b77cba79c4cc8bbb664fbc27a11fcdad 610 Gene3D G3DSA:1.10.150.20 555 609 5.3E-21 T 22-04-2016 YE1830 b77cba79c4cc8bbb664fbc27a11fcdad 610 Pfam PF02151 UvrB/uvrC motif 205 237 4.9E-9 T 22-04-2016 IPR001943 UVR domain GO:0005515 YE1830 b77cba79c4cc8bbb664fbc27a11fcdad 610 SUPERFAMILY SSF47781 521 609 1.68E-17 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 YE1830 b77cba79c4cc8bbb664fbc27a11fcdad 610 SUPERFAMILY SSF46600 191 243 3.4E-12 T 22-04-2016 IPR001943 UVR domain GO:0005515 YE1830 b77cba79c4cc8bbb664fbc27a11fcdad 610 PANTHER PTHR30562 8 608 1.7E-303 T 22-04-2016 YE1830 b77cba79c4cc8bbb664fbc27a11fcdad 610 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 8 589 1.2E-227 T 22-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 YE1830 b77cba79c4cc8bbb664fbc27a11fcdad 610 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 385 542 8.7E-45 T 22-04-2016 IPR001162 UvrC family homology region YE1830 b77cba79c4cc8bbb664fbc27a11fcdad 610 Gene3D G3DSA:3.40.1440.10 17 97 9.6E-12 T 22-04-2016 IPR027299 GIY-YIG domain YE1830 b77cba79c4cc8bbb664fbc27a11fcdad 610 Pfam PF14520 Helix-hairpin-helix domain 560 609 8.2E-6 T 22-04-2016 YE2981 c609511866b0c05df31481c109bed26b 407 Gene3D G3DSA:3.30.420.40 86 225 1.9E-30 T 22-04-2016 YE2981 c609511866b0c05df31481c109bed26b 407 Pfam PF00480 ROK family 89 393 2.9E-91 T 22-04-2016 IPR000600 ROK family YE2981 c609511866b0c05df31481c109bed26b 407 Gene3D G3DSA:1.10.10.10 15 80 9.1E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2981 c609511866b0c05df31481c109bed26b 407 SUPERFAMILY SSF53067 89 395 1.18E-55 T 22-04-2016 YE2981 c609511866b0c05df31481c109bed26b 407 PANTHER PTHR18964 307 404 4.8E-217 T 22-04-2016 YE2981 c609511866b0c05df31481c109bed26b 407 Pfam PF01047 MarR family 26 64 1.1E-6 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YE2981 c609511866b0c05df31481c109bed26b 407 Gene3D G3DSA:3.30.420.40 226 377 1.4E-48 T 22-04-2016 YE2981 c609511866b0c05df31481c109bed26b 407 PANTHER PTHR18964:SF128 307 404 4.8E-217 T 22-04-2016 YE2981 c609511866b0c05df31481c109bed26b 407 ProSitePatterns PS01125 ROK family signature. 221 248 - T 22-04-2016 IPR000600 ROK family YE2981 c609511866b0c05df31481c109bed26b 407 PANTHER PTHR18964 65 290 4.8E-217 T 22-04-2016 YE2981 c609511866b0c05df31481c109bed26b 407 SUPERFAMILY SSF46785 15 80 1.53E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2981 c609511866b0c05df31481c109bed26b 407 PANTHER PTHR18964:SF128 65 290 4.8E-217 T 22-04-2016 YE3265 d1488e3b42377e236f40456a71a7a107 461 SUPERFAMILY SSF82829 238 323 4.71E-24 T 22-04-2016 YE3265 d1488e3b42377e236f40456a71a7a107 461 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 383 423 1.8E-12 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 YE3265 d1488e3b42377e236f40456a71a7a107 461 Pfam PF09179 TilS substrate binding domain 252 319 9.5E-18 T 22-04-2016 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 YE3265 d1488e3b42377e236f40456a71a7a107 461 SUPERFAMILY SSF52402 16 237 3.75E-61 T 22-04-2016 YE3265 d1488e3b42377e236f40456a71a7a107 461 SMART SM00977 379 451 8.8E-26 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 YE3265 d1488e3b42377e236f40456a71a7a107 461 PANTHER PTHR11807:SF2 21 444 2.8E-100 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 YE3265 d1488e3b42377e236f40456a71a7a107 461 Pfam PF01171 PP-loop family 24 202 3.5E-58 T 22-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal YE3265 d1488e3b42377e236f40456a71a7a107 461 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 24 207 2.7E-53 T 22-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 YE3265 d1488e3b42377e236f40456a71a7a107 461 SUPERFAMILY SSF56037 347 453 2.88E-31 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 YE3265 d1488e3b42377e236f40456a71a7a107 461 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 12 311 23.185 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 YE3265 d1488e3b42377e236f40456a71a7a107 461 Gene3D G3DSA:3.40.50.620 20 179 2.6E-12 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YE3265 d1488e3b42377e236f40456a71a7a107 461 PANTHER PTHR11807 21 444 2.8E-100 T 22-04-2016 YE3265 d1488e3b42377e236f40456a71a7a107 461 Pfam PF11734 TilS substrate C-terminal domain 380 451 2.6E-26 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 YE0342 fcf0a16f01bdad5087f800398742b2f0 326 PANTHER PTHR11732:SF215 1 326 1.5E-176 T 22-04-2016 YE0342 fcf0a16f01bdad5087f800398742b2f0 326 Gene3D G3DSA:3.20.20.100 1 322 4.4E-108 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YE0342 fcf0a16f01bdad5087f800398742b2f0 326 Pfam PF00248 Aldo/keto reductase family 16 305 1.9E-70 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YE0342 fcf0a16f01bdad5087f800398742b2f0 326 PRINTS PR00069 Aldo-keto reductase signature 43 67 1.3E-5 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YE0342 fcf0a16f01bdad5087f800398742b2f0 326 PRINTS PR00069 Aldo-keto reductase signature 239 263 1.3E-5 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YE0342 fcf0a16f01bdad5087f800398742b2f0 326 PRINTS PR00069 Aldo-keto reductase signature 106 124 1.3E-5 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YE0342 fcf0a16f01bdad5087f800398742b2f0 326 PANTHER PTHR11732 1 326 1.5E-176 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta YE0342 fcf0a16f01bdad5087f800398742b2f0 326 SUPERFAMILY SSF51430 1 316 5.24E-97 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YE2649 d2dbe714564f523a79a4f54cd87781cd 182 Pfam PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase 15 176 1.1E-52 T 22-04-2016 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 YE2649 d2dbe714564f523a79a4f54cd87781cd 182 TIGRFAM TIGR03124 citrate_citX: holo-ACP synthase CitX 14 176 2.6E-51 T 22-04-2016 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 YE3137 ba69dce8c13b843fc98aaab6a46d055c 110 Gene3D G3DSA:3.30.300.90 3 102 7.8E-33 T 22-04-2016 IPR002634 BolA protein YE3137 ba69dce8c13b843fc98aaab6a46d055c 110 PIRSF PIRSF003113 1 101 1.7E-33 T 22-04-2016 IPR002634 BolA protein YE3137 ba69dce8c13b843fc98aaab6a46d055c 110 SUPERFAMILY SSF82657 3 90 1.44E-30 T 22-04-2016 IPR002634 BolA protein YE3137 ba69dce8c13b843fc98aaab6a46d055c 110 PANTHER PTHR12735 1 105 1.3E-69 T 22-04-2016 YE3137 ba69dce8c13b843fc98aaab6a46d055c 110 Pfam PF01722 BolA-like protein 12 85 2.5E-30 T 22-04-2016 IPR002634 BolA protein YE3137 ba69dce8c13b843fc98aaab6a46d055c 110 PANTHER PTHR12735:SF23 1 105 1.3E-69 T 22-04-2016 YE1166 1011fff4ed703cd8db176fbcd163cb64 300 Pfam PF03466 LysR substrate binding domain 134 296 6.8E-7 T 22-04-2016 IPR005119 LysR, substrate-binding YE1166 1011fff4ed703cd8db176fbcd163cb64 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 5.9E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE1166 1011fff4ed703cd8db176fbcd163cb64 300 SUPERFAMILY SSF53850 133 297 3.8E-13 T 22-04-2016 YE1166 1011fff4ed703cd8db176fbcd163cb64 300 Gene3D G3DSA:3.40.190.10 173 268 1.6E-6 T 22-04-2016 YE1166 1011fff4ed703cd8db176fbcd163cb64 300 Gene3D G3DSA:1.10.10.10 1 82 2.6E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1166 1011fff4ed703cd8db176fbcd163cb64 300 SUPERFAMILY SSF46785 2 83 1.12E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1166 1011fff4ed703cd8db176fbcd163cb64 300 PANTHER PTHR30118 1 290 3.7E-30 T 22-04-2016 YE2889 9349f1b49a70296be6f50953740f7f9f 451 SUPERFAMILY SSF52540 75 361 2.98E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2889 9349f1b49a70296be6f50953740f7f9f 451 Pfam PF00271 Helicase conserved C-terminal domain 235 339 1.0E-25 T 22-04-2016 IPR001650 Helicase, C-terminal YE2889 9349f1b49a70296be6f50953740f7f9f 451 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site YE2889 9349f1b49a70296be6f50953740f7f9f 451 SMART SM00490 259 340 2.3E-32 T 22-04-2016 IPR001650 Helicase, C-terminal YE2889 9349f1b49a70296be6f50953740f7f9f 451 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 450 51.172 T 22-04-2016 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 YE2889 9349f1b49a70296be6f50953740f7f9f 451 SMART SM00487 20 223 4.7E-58 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain YE2889 9349f1b49a70296be6f50953740f7f9f 451 Gene3D G3DSA:3.40.50.300 213 374 1.3E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2889 9349f1b49a70296be6f50953740f7f9f 451 Gene3D G3DSA:3.40.50.300 1 212 4.1E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2889 9349f1b49a70296be6f50953740f7f9f 451 PANTHER PTHR24031 1 449 3.3E-196 T 22-04-2016 YE2889 9349f1b49a70296be6f50953740f7f9f 451 Pfam PF00270 DEAD/DEAH box helicase 25 195 2.0E-49 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YE2889 9349f1b49a70296be6f50953740f7f9f 451 PANTHER PTHR24031:SF0 1 449 3.3E-196 T 22-04-2016 YE1544 8039c2f81f5cbab0ba3e6ca62d2d3850 328 PANTHER PTHR30160:SF13 1 325 1.6E-101 T 22-04-2016 YE1544 8039c2f81f5cbab0ba3e6ca62d2d3850 328 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 13 319 2.7E-114 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 YE1544 8039c2f81f5cbab0ba3e6ca62d2d3850 328 Gene3D G3DSA:3.40.50.300 45 108 5.0E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1544 8039c2f81f5cbab0ba3e6ca62d2d3850 328 Gene3D G3DSA:3.40.50.300 155 167 5.0E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1544 8039c2f81f5cbab0ba3e6ca62d2d3850 328 SUPERFAMILY SSF52540 46 182 2.34E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1544 8039c2f81f5cbab0ba3e6ca62d2d3850 328 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 1 325 40.785 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 YE1544 8039c2f81f5cbab0ba3e6ca62d2d3850 328 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 19 322 3.1E-110 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 YE1544 8039c2f81f5cbab0ba3e6ca62d2d3850 328 PANTHER PTHR30160 1 325 1.6E-101 T 22-04-2016 YE1046 ac6f3c4b2c22220d964763d0ec8968f3 396 Hamap MF_01252 Flavohemoprotein [hmp]. 1 396 57.111 T 22-04-2016 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 YE1046 ac6f3c4b2c22220d964763d0ec8968f3 396 PANTHER PTHR22924:SF49 1 392 7.5E-130 T 22-04-2016 YE1046 ac6f3c4b2c22220d964763d0ec8968f3 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 263 282 1.1E-5 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 YE1046 ac6f3c4b2c22220d964763d0ec8968f3 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 247 256 1.1E-5 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 YE1046 ac6f3c4b2c22220d964763d0ec8968f3 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 358 366 1.1E-5 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 YE1046 ac6f3c4b2c22220d964763d0ec8968f3 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 183 195 1.1E-5 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 YE1046 ac6f3c4b2c22220d964763d0ec8968f3 396 Gene3D G3DSA:1.10.490.10 2 141 4.1E-54 T 22-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 YE1046 ac6f3c4b2c22220d964763d0ec8968f3 396 Pfam PF00042 Globin 7 102 3.0E-13 T 22-04-2016 IPR000971 Globin GO:0019825|GO:0020037 YE1046 ac6f3c4b2c22220d964763d0ec8968f3 396 Pfam PF00970 Oxidoreductase FAD-binding domain 156 252 2.7E-10 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain YE1046 ac6f3c4b2c22220d964763d0ec8968f3 396 Pfam PF00175 Oxidoreductase NAD-binding domain 264 371 7.9E-15 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 YE1046 ac6f3c4b2c22220d964763d0ec8968f3 396 SUPERFAMILY SSF52343 255 395 8.91E-38 T 22-04-2016 YE1046 ac6f3c4b2c22220d964763d0ec8968f3 396 SUPERFAMILY SSF46458 1 142 7.32E-38 T 22-04-2016 IPR009050 Globin-like YE1046 ac6f3c4b2c22220d964763d0ec8968f3 396 SUPERFAMILY SSF63380 148 253 8.85E-29 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 YE1046 ac6f3c4b2c22220d964763d0ec8968f3 396 Gene3D G3DSA:2.40.30.10 149 254 1.2E-33 T 22-04-2016 YE1046 ac6f3c4b2c22220d964763d0ec8968f3 396 PANTHER PTHR22924 1 392 7.5E-130 T 22-04-2016 YE1046 ac6f3c4b2c22220d964763d0ec8968f3 396 Gene3D G3DSA:3.40.50.80 258 395 4.8E-33 T 22-04-2016 YE0893 06bd1948fb009435740d6b96084a53f9 857 Gene3D G3DSA:1.10.1780.10 1 148 1.3E-47 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 YE0893 06bd1948fb009435740d6b96084a53f9 857 Gene3D G3DSA:1.10.8.60 343 428 1.2E-37 T 22-04-2016 YE0893 06bd1948fb009435740d6b96084a53f9 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 335 3.7E-13 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 YE0893 06bd1948fb009435740d6b96084a53f9 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 1.3E-10 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 YE0893 06bd1948fb009435740d6b96084a53f9 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 69 5.0E-15 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 YE0893 06bd1948fb009435740d6b96084a53f9 857 SMART SM00382 198 344 1.3E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain YE0893 06bd1948fb009435740d6b96084a53f9 857 SMART SM00382 597 738 5.3E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YE0893 06bd1948fb009435740d6b96084a53f9 857 Gene3D G3DSA:1.10.8.60 778 855 3.3E-29 T 22-04-2016 YE0893 06bd1948fb009435740d6b96084a53f9 857 SMART SM01086 766 855 3.1E-36 T 22-04-2016 IPR019489 Clp ATPase, C-terminal YE0893 06bd1948fb009435740d6b96084a53f9 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 844 1.5E-25 T 22-04-2016 IPR019489 Clp ATPase, C-terminal YE0893 06bd1948fb009435740d6b96084a53f9 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 YE0893 06bd1948fb009435740d6b96084a53f9 857 PANTHER PTHR11638:SF18 1 856 0.0 T 22-04-2016 YE0893 06bd1948fb009435740d6b96084a53f9 857 SUPERFAMILY SSF52540 159 545 1.23E-99 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0893 06bd1948fb009435740d6b96084a53f9 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 760 2.5E-57 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 YE0893 06bd1948fb009435740d6b96084a53f9 857 PANTHER PTHR11638 1 856 0.0 T 22-04-2016 YE0893 06bd1948fb009435740d6b96084a53f9 857 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 854 0.0 T 22-04-2016 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 YE0893 06bd1948fb009435740d6b96084a53f9 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 1.6E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YE0893 06bd1948fb009435740d6b96084a53f9 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 1.6E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YE0893 06bd1948fb009435740d6b96084a53f9 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 1.6E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YE0893 06bd1948fb009435740d6b96084a53f9 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 1.6E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YE0893 06bd1948fb009435740d6b96084a53f9 857 SUPERFAMILY SSF52540 546 851 5.26E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0893 06bd1948fb009435740d6b96084a53f9 857 SUPERFAMILY SSF81923 4 156 7.75E-43 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 YE0893 06bd1948fb009435740d6b96084a53f9 857 Gene3D G3DSA:3.40.50.300 160 342 1.2E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0893 06bd1948fb009435740d6b96084a53f9 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 YE0893 06bd1948fb009435740d6b96084a53f9 857 Gene3D G3DSA:3.40.50.300 551 777 1.1E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1840 9b58ded6df34fd6c334350b85ffa3339 160 PANTHER PTHR38107:SF2 1 159 7.1E-47 T 22-04-2016 YE1840 9b58ded6df34fd6c334350b85ffa3339 160 Pfam PF00959 Phage lysozyme 46 151 4.6E-24 T 22-04-2016 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 YE1840 9b58ded6df34fd6c334350b85ffa3339 160 SUPERFAMILY SSF53955 9 160 9.72E-51 T 22-04-2016 IPR023346 Lysozyme-like domain YE1840 9b58ded6df34fd6c334350b85ffa3339 160 Gene3D G3DSA:1.10.530.40 31 159 2.0E-48 T 22-04-2016 IPR023347 Lysozyme domain GO:0003796 YE1840 9b58ded6df34fd6c334350b85ffa3339 160 PANTHER PTHR38107 1 159 7.1E-47 T 22-04-2016 YE3972 be8913ee9cb3e7d31d129c5b04ef457d 270 PANTHER PTHR30481 2 270 3.0E-128 T 22-04-2016 YE3972 be8913ee9cb3e7d31d129c5b04ef457d 270 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 YE3972 be8913ee9cb3e7d31d129c5b04ef457d 270 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 268 6.2E-96 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 YE3972 be8913ee9cb3e7d31d129c5b04ef457d 270 Gene3D G3DSA:3.40.50.150 1 59 2.8E-51 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE3972 be8913ee9cb3e7d31d129c5b04ef457d 270 Gene3D G3DSA:3.40.50.150 160 267 2.8E-51 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE3972 be8913ee9cb3e7d31d129c5b04ef457d 270 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 9.8E-19 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 YE3972 be8913ee9cb3e7d31d129c5b04ef457d 270 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 9.8E-19 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 YE3972 be8913ee9cb3e7d31d129c5b04ef457d 270 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 9.8E-19 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 YE3972 be8913ee9cb3e7d31d129c5b04ef457d 270 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 9.8E-19 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 YE3972 be8913ee9cb3e7d31d129c5b04ef457d 270 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 252 1.7E-75 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 YE3972 be8913ee9cb3e7d31d129c5b04ef457d 270 PIRSF PIRSF000398 1 270 4.2E-66 T 22-04-2016 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 YE3972 be8913ee9cb3e7d31d129c5b04ef457d 270 Gene3D G3DSA:1.10.1020.10 60 156 2.1E-35 T 22-04-2016 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 YE3972 be8913ee9cb3e7d31d129c5b04ef457d 270 SUPERFAMILY SSF53335 5 268 7.75E-73 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE3972 be8913ee9cb3e7d31d129c5b04ef457d 270 PANTHER PTHR30481:SF3 2 270 3.0E-128 T 22-04-2016 YE2382 0939840cd318fb8b6bed459efc6e8a70 213 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 128 141 - T 22-04-2016 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 YE2382 0939840cd318fb8b6bed459efc6e8a70 213 SUPERFAMILY SSF51569 4 209 7.87E-70 T 22-04-2016 YE2382 0939840cd318fb8b6bed459efc6e8a70 213 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 40 49 - T 22-04-2016 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562|UniPathway: UPA00227|UniPathway: UPA00856 YE2382 0939840cd318fb8b6bed459efc6e8a70 213 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 9 209 1.0E-85 T 22-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 YE2382 0939840cd318fb8b6bed459efc6e8a70 213 Gene3D G3DSA:3.20.20.70 2 209 1.5E-78 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YE2382 0939840cd318fb8b6bed459efc6e8a70 213 PANTHER PTHR30246:SF0 1 208 6.1E-134 T 22-04-2016 YE2382 0939840cd318fb8b6bed459efc6e8a70 213 PANTHER PTHR30246 1 208 6.1E-134 T 22-04-2016 YE2382 0939840cd318fb8b6bed459efc6e8a70 213 Pfam PF01081 KDPG and KHG aldolase 9 203 7.2E-91 T 22-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 YE2669a 49bd14b1511703a2386028f7f3f65f7a 152 Gene3D G3DSA:3.40.630.30 2 148 2.6E-35 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE2669a 49bd14b1511703a2386028f7f3f65f7a 152 SUPERFAMILY SSF55729 8 137 2.49E-30 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE2669a 49bd14b1511703a2386028f7f3f65f7a 152 PANTHER PTHR10545 8 150 7.6E-55 T 22-04-2016 YE2669a 49bd14b1511703a2386028f7f3f65f7a 152 Pfam PF00583 Acetyltransferase (GNAT) family 61 136 5.4E-14 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YE2669a 49bd14b1511703a2386028f7f3f65f7a 152 PANTHER PTHR10545:SF39 8 150 7.6E-55 T 22-04-2016 IPR032962 Acetyltransferase HPA2/HPA3 GO:0016746 YE2878 74fddc7cf895eba0ac943e9bc064d279 278 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 25 269 3.8E-91 T 22-04-2016 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 YE2878 74fddc7cf895eba0ac943e9bc064d279 278 Pfam PF00005 ABC transporter 41 202 2.9E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE2878 74fddc7cf895eba0ac943e9bc064d279 278 PANTHER PTHR24220 26 277 6.5E-119 T 22-04-2016 YE2878 74fddc7cf895eba0ac943e9bc064d279 278 Gene3D G3DSA:3.40.50.300 23 260 3.5E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2878 74fddc7cf895eba0ac943e9bc064d279 278 SUPERFAMILY SSF52540 24 260 1.16E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2878 74fddc7cf895eba0ac943e9bc064d279 278 ProSitePatterns PS00211 ABC transporters family signature. 174 188 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE2878 74fddc7cf895eba0ac943e9bc064d279 278 PANTHER PTHR24220:SF408 26 277 6.5E-119 T 22-04-2016 YE2878 74fddc7cf895eba0ac943e9bc064d279 278 SMART SM00382 50 272 1.5E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain YE1276 0d37cb00b50891014c67848c86b3c0fc 436 ProSitePatterns PS00099 Thiolases active site. 417 430 - T 22-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 YE1276 0d37cb00b50891014c67848c86b3c0fc 436 PANTHER PTHR18919 10 436 3.7E-201 T 22-04-2016 YE1276 0d37cb00b50891014c67848c86b3c0fc 436 PIRSF PIRSF000429 9 436 3.8E-124 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 YE1276 0d37cb00b50891014c67848c86b3c0fc 436 Pfam PF00108 Thiolase, N-terminal domain 15 288 3.2E-64 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 YE1276 0d37cb00b50891014c67848c86b3c0fc 436 Hamap MF_01618 3-ketoacyl-CoA thiolase [fadI]. 2 436 70.173 T 22-04-2016 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0005737|GO:0006631|GO:0016042|GO:0016740|GO:0016746 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 YE1276 0d37cb00b50891014c67848c86b3c0fc 436 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 95 113 - T 22-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 YE1276 0d37cb00b50891014c67848c86b3c0fc 436 Pfam PF02803 Thiolase, C-terminal domain 296 434 9.0E-37 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 YE1276 0d37cb00b50891014c67848c86b3c0fc 436 PANTHER PTHR18919:SF5 10 436 3.7E-201 T 22-04-2016 YE1276 0d37cb00b50891014c67848c86b3c0fc 436 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 17 434 6.0E-134 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 YE1276 0d37cb00b50891014c67848c86b3c0fc 436 Gene3D G3DSA:3.40.47.10 221 300 9.3E-56 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YE1276 0d37cb00b50891014c67848c86b3c0fc 436 Gene3D G3DSA:3.40.47.10 15 134 9.3E-56 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YE1276 0d37cb00b50891014c67848c86b3c0fc 436 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 7 436 5.7E-255 T 22-04-2016 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0005737|GO:0006631|GO:0016042|GO:0016740|GO:0016746 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 YE1276 0d37cb00b50891014c67848c86b3c0fc 436 SUPERFAMILY SSF53901 297 435 4.58E-32 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YE1276 0d37cb00b50891014c67848c86b3c0fc 436 SUPERFAMILY SSF53901 15 295 3.49E-65 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YE1276 0d37cb00b50891014c67848c86b3c0fc 436 ProSitePatterns PS00737 Thiolases signature 2. 382 398 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 YE1276 0d37cb00b50891014c67848c86b3c0fc 436 Gene3D G3DSA:3.40.47.10 174 220 1.7E-47 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YE1276 0d37cb00b50891014c67848c86b3c0fc 436 Gene3D G3DSA:3.40.47.10 302 436 1.7E-47 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YE0178 ecdfcdf85cb7cb89cfedec46b496cd40 361 Pfam PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 1 357 1.4E-178 T 22-04-2016 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase GO:0008417|GO:0009246|GO:0036065 UniPathway: UPA00566 YE0178 ecdfcdf85cb7cb89cfedec46b496cd40 361 Hamap MF_01002 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [wecF]. 1 361 67.566 T 22-04-2016 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase GO:0008417|GO:0009246|GO:0036065 UniPathway: UPA00566 YE1982 4520e9be68bba7fa79286821e95aff50 644 SMART SM00357 23 79 1.5E-12 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 YE1982 4520e9be68bba7fa79286821e95aff50 644 SUPERFAMILY SSF50249 83 171 2.4E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE1982 4520e9be68bba7fa79286821e95aff50 644 ProSitePatterns PS01175 Ribonuclease II family signature. 484 508 - T 22-04-2016 IPR022966 Ribonuclease II/R, conserved site YE1982 4520e9be68bba7fa79286821e95aff50 644 Pfam PF08206 Ribonuclease B OB domain 24 80 5.8E-19 T 22-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain YE1982 4520e9be68bba7fa79286821e95aff50 644 SMART SM00955 189 517 8.5E-124 T 22-04-2016 YE1982 4520e9be68bba7fa79286821e95aff50 644 Pfam PF00773 RNB domain 189 516 3.7E-85 T 22-04-2016 YE1982 4520e9be68bba7fa79286821e95aff50 644 TIGRFAM TIGR02062 RNase_B: exoribonuclease II 1 642 0.0 T 22-04-2016 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 YE1982 4520e9be68bba7fa79286821e95aff50 644 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 6 643 1.4E-220 T 22-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 YE1982 4520e9be68bba7fa79286821e95aff50 644 PANTHER PTHR23355:SF37 21 643 0.0 T 22-04-2016 YE1982 4520e9be68bba7fa79286821e95aff50 644 Pfam PF00575 S1 RNA binding domain 560 638 3.9E-10 T 22-04-2016 IPR003029 S1 domain GO:0003676 YE1982 4520e9be68bba7fa79286821e95aff50 644 SUPERFAMILY SSF50249 560 642 1.24E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE1982 4520e9be68bba7fa79286821e95aff50 644 SUPERFAMILY SSF50249 177 556 1.26E-114 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE1982 4520e9be68bba7fa79286821e95aff50 644 Gene3D G3DSA:2.40.50.140 564 639 5.6E-4 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE1982 4520e9be68bba7fa79286821e95aff50 644 SUPERFAMILY SSF50249 8 80 1.64E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE1982 4520e9be68bba7fa79286821e95aff50 644 PANTHER PTHR23355 21 643 0.0 T 22-04-2016 YE1982 4520e9be68bba7fa79286821e95aff50 644 Hamap MF_01036 Exoribonuclease 2 [rnb]. 1 643 45.052 T 22-04-2016 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 YE2311 aad1ccd74671702f409b2aee2d826789 250 TIGRFAM TIGR01600 phage_tail_L: phage minor tail protein L 6 245 4.0E-64 T 22-04-2016 IPR006487 Bacteriophage lambda, GpL, minor tail YE2311 aad1ccd74671702f409b2aee2d826789 250 Pfam PF05100 Phage minor tail protein L 28 247 5.1E-86 T 22-04-2016 IPR006487 Bacteriophage lambda, GpL, minor tail YE1720 f3e7c5e7be80e858da6757e690dc5ce0 456 PANTHER PTHR11444 4 455 0.0 T 22-04-2016 IPR000362 Fumarate lyase family YE1720 f3e7c5e7be80e858da6757e690dc5ce0 456 Gene3D G3DSA:1.10.40.30 390 445 1.3E-33 T 22-04-2016 YE1720 f3e7c5e7be80e858da6757e690dc5ce0 456 PANTHER PTHR11444:SF17 4 455 0.0 T 22-04-2016 YE1720 f3e7c5e7be80e858da6757e690dc5ce0 456 Gene3D G3DSA:1.20.200.10 120 389 6.5E-88 T 22-04-2016 YE1720 f3e7c5e7be80e858da6757e690dc5ce0 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 455 2.6E-151 T 22-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 YE1720 f3e7c5e7be80e858da6757e690dc5ce0 456 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 4.7E-17 T 22-04-2016 IPR000362 Fumarate lyase family YE1720 f3e7c5e7be80e858da6757e690dc5ce0 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 4.7E-17 T 22-04-2016 IPR000362 Fumarate lyase family YE1720 f3e7c5e7be80e858da6757e690dc5ce0 456 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 4.7E-17 T 22-04-2016 IPR000362 Fumarate lyase family YE1720 f3e7c5e7be80e858da6757e690dc5ce0 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 4.7E-17 T 22-04-2016 IPR000362 Fumarate lyase family YE1720 f3e7c5e7be80e858da6757e690dc5ce0 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 445 1.7E-52 T 22-04-2016 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 YE1720 f3e7c5e7be80e858da6757e690dc5ce0 456 SUPERFAMILY SSF48557 10 454 2.83E-104 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 YE1720 f3e7c5e7be80e858da6757e690dc5ce0 456 Pfam PF00206 Lyase 14 312 8.5E-77 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal YE1720 f3e7c5e7be80e858da6757e690dc5ce0 456 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 YE1720 f3e7c5e7be80e858da6757e690dc5ce0 456 Gene3D G3DSA:1.10.275.10 1 119 2.0E-50 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal YE3414 7354f2abdb0ea9473abb4a6700a05c33 387 SUPERFAMILY SSF53748 3 383 3.18E-144 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 YE3414 7354f2abdb0ea9473abb4a6700a05c33 387 PANTHER PTHR11406 1 387 1.3E-202 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 YE3414 7354f2abdb0ea9473abb4a6700a05c33 387 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 22-04-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 YE3414 7354f2abdb0ea9473abb4a6700a05c33 387 Gene3D G3DSA:3.40.50.1260 5 174 3.7E-65 T 22-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 YE3414 7354f2abdb0ea9473abb4a6700a05c33 387 PIRSF PIRSF000724 1 387 2.3E-132 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 YE3414 7354f2abdb0ea9473abb4a6700a05c33 387 Pfam PF00162 Phosphoglycerate kinase 6 373 3.7E-137 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 YE3414 7354f2abdb0ea9473abb4a6700a05c33 387 Gene3D G3DSA:3.40.50.1270 175 371 1.1E-79 T 22-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 YE3414 7354f2abdb0ea9473abb4a6700a05c33 387 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 2.9E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 YE3414 7354f2abdb0ea9473abb4a6700a05c33 387 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 2.9E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 YE3414 7354f2abdb0ea9473abb4a6700a05c33 387 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 2.9E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 YE3414 7354f2abdb0ea9473abb4a6700a05c33 387 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 2.9E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 YE3414 7354f2abdb0ea9473abb4a6700a05c33 387 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 2.9E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 YE3414 7354f2abdb0ea9473abb4a6700a05c33 387 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 2.9E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 YE3414 7354f2abdb0ea9473abb4a6700a05c33 387 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 2.9E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 YE3414 7354f2abdb0ea9473abb4a6700a05c33 387 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 2.9E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 YE3414 7354f2abdb0ea9473abb4a6700a05c33 387 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 2.9E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 YE3414 7354f2abdb0ea9473abb4a6700a05c33 387 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 39.149 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 YE2077 3e1a3145027446152159aa7234904ddd 463 PIRSF PIRSF000204 1 463 4.0E-238 T 22-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 YE2077 3e1a3145027446152159aa7234904ddd 463 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 461 1.2E-199 T 22-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 YE2077 3e1a3145027446152159aa7234904ddd 463 PANTHER PTHR10160 4 463 2.2E-253 T 22-04-2016 YE2077 3e1a3145027446152159aa7234904ddd 463 Gene3D G3DSA:3.40.50.1220 289 463 1.9E-91 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain YE2077 3e1a3145027446152159aa7234904ddd 463 SUPERFAMILY SSF52467 290 463 5.23E-78 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain YE2492 2dc20e63d69a4f88c3fbaf10ef11e3d5 237 PANTHER PTHR24220:SF433 19 231 9.5E-114 T 22-04-2016 YE2492 2dc20e63d69a4f88c3fbaf10ef11e3d5 237 Pfam PF00005 ABC transporter 33 178 6.8E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE2492 2dc20e63d69a4f88c3fbaf10ef11e3d5 237 SUPERFAMILY SSF52540 17 233 2.32E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2492 2dc20e63d69a4f88c3fbaf10ef11e3d5 237 SMART SM00382 42 226 2.7E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain YE2492 2dc20e63d69a4f88c3fbaf10ef11e3d5 237 PANTHER PTHR24220 19 231 9.5E-114 T 22-04-2016 YE2492 2dc20e63d69a4f88c3fbaf10ef11e3d5 237 Gene3D G3DSA:3.40.50.300 16 230 8.2E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2492 2dc20e63d69a4f88c3fbaf10ef11e3d5 237 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE2828 913b66d45e371546e3e0d2bd0da244a8 411 SUPERFAMILY SSF63882 9 178 1.07E-53 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 YE2828 913b66d45e371546e3e0d2bd0da244a8 411 SMART SM00852 183 320 2.3E-42 T 22-04-2016 IPR001453 MoaB/Mog domain YE2828 913b66d45e371546e3e0d2bd0da244a8 411 Gene3D G3DSA:3.90.105.10 145 165 2.5E-20 T 22-04-2016 YE2828 913b66d45e371546e3e0d2bd0da244a8 411 Gene3D G3DSA:3.90.105.10 29 52 2.5E-20 T 22-04-2016 YE2828 913b66d45e371546e3e0d2bd0da244a8 411 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 256 289 - T 22-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 YE2828 913b66d45e371546e3e0d2bd0da244a8 411 PANTHER PTHR10192:SF11 1 410 5.1E-253 T 22-04-2016 YE2828 913b66d45e371546e3e0d2bd0da244a8 411 Pfam PF00994 Probable molybdopterin binding domain 183 319 2.6E-26 T 22-04-2016 IPR001453 MoaB/Mog domain YE2828 913b66d45e371546e3e0d2bd0da244a8 411 Pfam PF03454 MoeA C-terminal region (domain IV) 334 406 8.3E-18 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 YE2828 913b66d45e371546e3e0d2bd0da244a8 411 Gene3D G3DSA:3.40.980.10 166 330 4.9E-62 T 22-04-2016 IPR001453 MoaB/Mog domain YE2828 913b66d45e371546e3e0d2bd0da244a8 411 SUPERFAMILY SSF63867 330 410 7.06E-23 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 YE2828 913b66d45e371546e3e0d2bd0da244a8 411 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 180 316 1.4E-32 T 22-04-2016 IPR001453 MoaB/Mog domain YE2828 913b66d45e371546e3e0d2bd0da244a8 411 Pfam PF03453 MoeA N-terminal region (domain I and II) 11 170 1.9E-37 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 YE2828 913b66d45e371546e3e0d2bd0da244a8 411 Gene3D G3DSA:2.170.190.11 53 144 8.1E-31 T 22-04-2016 YE2828 913b66d45e371546e3e0d2bd0da244a8 411 PANTHER PTHR10192 1 410 5.1E-253 T 22-04-2016 YE2828 913b66d45e371546e3e0d2bd0da244a8 411 SUPERFAMILY SSF53218 180 325 1.2E-42 T 22-04-2016 IPR001453 MoaB/Mog domain YE2828 913b66d45e371546e3e0d2bd0da244a8 411 Gene3D G3DSA:2.40.340.10 332 404 1.1E-31 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 YE2854 88d9a66fc4edbac2b118f08d1eb0a9e2 234 Gene3D G3DSA:1.20.1080.10 1 226 3.2E-66 T 22-04-2016 IPR023271 Aquaporin-like YE2854 88d9a66fc4edbac2b118f08d1eb0a9e2 234 Hamap MF_01146 Aquaporin Z [aqpZ]. 1 228 33.411 T 22-04-2016 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 YE2854 88d9a66fc4edbac2b118f08d1eb0a9e2 234 Pfam PF00230 Major intrinsic protein 2 221 1.0E-47 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 YE2854 88d9a66fc4edbac2b118f08d1eb0a9e2 234 SUPERFAMILY SSF81338 1 227 4.84E-66 T 22-04-2016 IPR023271 Aquaporin-like YE2854 88d9a66fc4edbac2b118f08d1eb0a9e2 234 ProSitePatterns PS00221 MIP family signature. 60 68 - T 22-04-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 YE2854 88d9a66fc4edbac2b118f08d1eb0a9e2 234 PANTHER PTHR19139 1 230 1.1E-72 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 YE2854 88d9a66fc4edbac2b118f08d1eb0a9e2 234 TIGRFAM TIGR00861 MIP: MIP family channel proteins 6 221 2.5E-57 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 YE2854 88d9a66fc4edbac2b118f08d1eb0a9e2 234 PRINTS PR00783 Major intrinsic protein family signature 79 98 2.8E-53 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 YE2854 88d9a66fc4edbac2b118f08d1eb0a9e2 234 PRINTS PR00783 Major intrinsic protein family signature 42 66 2.8E-53 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 YE2854 88d9a66fc4edbac2b118f08d1eb0a9e2 234 PRINTS PR00783 Major intrinsic protein family signature 204 224 2.8E-53 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 YE2854 88d9a66fc4edbac2b118f08d1eb0a9e2 234 PRINTS PR00783 Major intrinsic protein family signature 165 187 2.8E-53 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 YE2854 88d9a66fc4edbac2b118f08d1eb0a9e2 234 PRINTS PR00783 Major intrinsic protein family signature 135 153 2.8E-53 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 YE2854 88d9a66fc4edbac2b118f08d1eb0a9e2 234 PRINTS PR00783 Major intrinsic protein family signature 2 21 2.8E-53 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 YE2854 88d9a66fc4edbac2b118f08d1eb0a9e2 234 PANTHER PTHR19139:SF103 1 230 1.1E-72 T 22-04-2016 YE1476 af201c6cbf38f16e071a85cb716e6c3a 198 SMART SM00014 56 165 1.3E-23 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YE1476 af201c6cbf38f16e071a85cb716e6c3a 198 Gene3D G3DSA:1.20.144.10 8 166 1.3E-22 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YE1476 af201c6cbf38f16e071a85cb716e6c3a 198 PANTHER PTHR14969:SF20 1 191 1.3E-63 T 22-04-2016 YE1476 af201c6cbf38f16e071a85cb716e6c3a 198 Pfam PF01569 PAP2 superfamily 62 165 1.6E-14 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YE1476 af201c6cbf38f16e071a85cb716e6c3a 198 SUPERFAMILY SSF48317 4 168 7.06E-37 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YE1476 af201c6cbf38f16e071a85cb716e6c3a 198 PANTHER PTHR14969 1 191 1.3E-63 T 22-04-2016 YE3801 6ec2c1726b22a545fcd6a96d60140c07 489 Gene3D G3DSA:2.40.50.140 30 128 2.0E-33 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE3801 6ec2c1726b22a545fcd6a96d60140c07 489 SUPERFAMILY SSF50249 39 128 6.0E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE3801 6ec2c1726b22a545fcd6a96d60140c07 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 2.5E-174 T 22-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 YE3801 6ec2c1726b22a545fcd6a96d60140c07 489 Pfam PF00575 S1 RNA binding domain 38 109 3.1E-6 T 22-04-2016 IPR003029 S1 domain GO:0003676 YE3801 6ec2c1726b22a545fcd6a96d60140c07 489 PANTHER PTHR30001 1 489 4.0E-228 T 22-04-2016 YE3801 6ec2c1726b22a545fcd6a96d60140c07 489 SMART SM00316 37 122 2.1E-9 T 22-04-2016 IPR022967 RNA-binding domain, S1 YE3801 6ec2c1726b22a545fcd6a96d60140c07 489 Pfam PF10150 Ribonuclease E/G family 124 393 9.7E-102 T 22-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 YE3895 5ec572156f6ab4294d5408c874cbf5a1 141 Pfam PF13411 MerR HTH family regulatory protein 3 69 6.8E-21 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YE3895 5ec572156f6ab4294d5408c874cbf5a1 141 SMART SM00422 2 71 7.4E-31 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YE3895 5ec572156f6ab4294d5408c874cbf5a1 141 PANTHER PTHR30204 1 123 4.3E-57 T 22-04-2016 YE3895 5ec572156f6ab4294d5408c874cbf5a1 141 Gene3D G3DSA:1.10.1660.10 57 134 1.2E-30 T 22-04-2016 YE3895 5ec572156f6ab4294d5408c874cbf5a1 141 PANTHER PTHR30204:SF18 1 123 4.3E-57 T 22-04-2016 YE3895 5ec572156f6ab4294d5408c874cbf5a1 141 Gene3D G3DSA:1.10.1660.10 1 56 3.7E-28 T 22-04-2016 YE3895 5ec572156f6ab4294d5408c874cbf5a1 141 TIGRFAM TIGR02043 ZntR: Zn(II)-responsive transcriptional regulator 1 131 5.6E-69 T 22-04-2016 IPR011788 Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0008270 YE3895 5ec572156f6ab4294d5408c874cbf5a1 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 3.69E-13 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YE3895 5ec572156f6ab4294d5408c874cbf5a1 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 3.69E-13 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YE3895 5ec572156f6ab4294d5408c874cbf5a1 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 3.69E-13 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YE3895 5ec572156f6ab4294d5408c874cbf5a1 141 ProSitePatterns PS00552 MerR-type HTH domain signature. 5 27 - T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YE3895 5ec572156f6ab4294d5408c874cbf5a1 141 SUPERFAMILY SSF46955 2 121 3.48E-34 T 22-04-2016 IPR009061 Putative DNA-binding domain YE3359 5012873fa3c07b940ed615680ffbdbd8 791 Pfam PF13802 Galactose mutarotase-like 146 213 2.8E-22 T 22-04-2016 IPR025887 Glycoside hydrolase family 31, N-terminal domain YE3359 5012873fa3c07b940ed615680ffbdbd8 791 Pfam PF17137 Domain of unknown function (DUF5110) 700 766 1.2E-7 T 22-04-2016 IPR033403 Domain of unknown function DUF5110 YE3359 5012873fa3c07b940ed615680ffbdbd8 791 Pfam PF01055 Glycosyl hydrolases family 31 238 682 6.4E-116 T 22-04-2016 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 YE3359 5012873fa3c07b940ed615680ffbdbd8 791 SUPERFAMILY SSF51011 597 678 1.8E-19 T 22-04-2016 YE3359 5012873fa3c07b940ed615680ffbdbd8 791 SUPERFAMILY SSF74650 2 243 9.42E-47 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 YE3359 5012873fa3c07b940ed615680ffbdbd8 791 SUPERFAMILY SSF51445 247 594 5.85E-67 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YE3359 5012873fa3c07b940ed615680ffbdbd8 791 PANTHER PTHR22762:SF7 9 791 6.3E-281 T 22-04-2016 YE3359 5012873fa3c07b940ed615680ffbdbd8 791 PANTHER PTHR22762 9 791 6.3E-281 T 22-04-2016 YE0550A f3992848ef12acd5b5cc7e22160cf067 344 Pfam PF13377 Periplasmic binding protein-like domain 184 333 1.1E-12 T 22-04-2016 YE0550A f3992848ef12acd5b5cc7e22160cf067 344 Gene3D G3DSA:3.40.50.2300 175 333 1.1E-38 T 22-04-2016 YE0550A f3992848ef12acd5b5cc7e22160cf067 344 SUPERFAMILY SSF53822 66 325 2.16E-47 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YE0550A f3992848ef12acd5b5cc7e22160cf067 344 PANTHER PTHR30146 6 333 8.8E-77 T 22-04-2016 YE0550A f3992848ef12acd5b5cc7e22160cf067 344 SUPERFAMILY SSF47413 7 64 1.97E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE0550A f3992848ef12acd5b5cc7e22160cf067 344 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 56 1.3E-17 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE0550A f3992848ef12acd5b5cc7e22160cf067 344 Gene3D G3DSA:1.10.260.40 7 68 3.1E-25 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE0550A f3992848ef12acd5b5cc7e22160cf067 344 Gene3D G3DSA:3.40.50.2300 69 174 9.5E-28 T 22-04-2016 YE0550A f3992848ef12acd5b5cc7e22160cf067 344 SMART SM00354 6 79 5.9E-32 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE0550A f3992848ef12acd5b5cc7e22160cf067 344 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 8 333 2.1E-123 T 22-04-2016 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 YE4003 894133665e1106231242e72fe424e740 165 Gene3D G3DSA:1.10.287.180 3 76 1.9E-23 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 YE4003 894133665e1106231242e72fe424e740 165 Hamap MF_00930 Transcription elongation factor GreB [greB]. 2 157 53.409 T 22-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 YE4003 894133665e1106231242e72fe424e740 165 PANTHER PTHR30437:SF6 1 164 2.2E-100 T 22-04-2016 YE4003 894133665e1106231242e72fe424e740 165 PIRSF PIRSF006092 1 158 2.2E-61 T 22-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 YE4003 894133665e1106231242e72fe424e740 165 SUPERFAMILY SSF54534 81 156 3.14E-24 T 22-04-2016 YE4003 894133665e1106231242e72fe424e740 165 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 YE4003 894133665e1106231242e72fe424e740 165 SUPERFAMILY SSF46557 4 79 2.49E-26 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 YE4003 894133665e1106231242e72fe424e740 165 PANTHER PTHR30437 1 164 2.2E-100 T 22-04-2016 YE4003 894133665e1106231242e72fe424e740 165 Hamap MF_00105 Transcription elongation factor GreA [greA]. 3 155 28.671 T 22-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 YE4003 894133665e1106231242e72fe424e740 165 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 4 157 7.6E-73 T 22-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 YE4003 894133665e1106231242e72fe424e740 165 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 156 1.9E-27 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 YE4003 894133665e1106231242e72fe424e740 165 Gene3D G3DSA:3.10.50.30 77 156 2.3E-31 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 YE4003 894133665e1106231242e72fe424e740 165 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 18 49 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 YE4003 894133665e1106231242e72fe424e740 165 Pfam PF03449 Transcription elongation factor, N-terminal 5 75 5.8E-24 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 YE2996 6e88e9f10f86b2874b0d89587092e458 860 SUPERFAMILY SSF52374 416 668 9.69E-140 T 22-04-2016 YE2996 6e88e9f10f86b2874b0d89587092e458 860 SUPERFAMILY SSF52374 5 226 9.69E-140 T 22-04-2016 YE2996 6e88e9f10f86b2874b0d89587092e458 860 Pfam PF08264 Anticodon-binding domain of tRNA 701 822 1.6E-16 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 YE2996 6e88e9f10f86b2874b0d89587092e458 860 Gene3D G3DSA:3.40.50.620 425 573 1.1E-150 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YE2996 6e88e9f10f86b2874b0d89587092e458 860 Gene3D G3DSA:3.40.50.620 618 647 1.1E-150 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YE2996 6e88e9f10f86b2874b0d89587092e458 860 Gene3D G3DSA:3.40.50.620 4 222 1.1E-150 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YE2996 6e88e9f10f86b2874b0d89587092e458 860 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 859 23.39 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 YE2996 6e88e9f10f86b2874b0d89587092e458 860 SUPERFAMILY SSF50677 226 415 2.72E-57 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 YE2996 6e88e9f10f86b2874b0d89587092e458 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 485 503 1.0E-51 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 YE2996 6e88e9f10f86b2874b0d89587092e458 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 1.0E-51 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 YE2996 6e88e9f10f86b2874b0d89587092e458 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 1.0E-51 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 YE2996 6e88e9f10f86b2874b0d89587092e458 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 1.0E-51 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 YE2996 6e88e9f10f86b2874b0d89587092e458 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 557 567 1.0E-51 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 YE2996 6e88e9f10f86b2874b0d89587092e458 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 524 546 1.0E-51 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 YE2996 6e88e9f10f86b2874b0d89587092e458 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 1.0E-51 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 YE2996 6e88e9f10f86b2874b0d89587092e458 860 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 859 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 YE2996 6e88e9f10f86b2874b0d89587092e458 860 Gene3D G3DSA:1.10.730.10 648 795 2.3E-45 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YE2996 6e88e9f10f86b2874b0d89587092e458 860 PANTHER PTHR11946 240 571 0.0 T 22-04-2016 YE2996 6e88e9f10f86b2874b0d89587092e458 860 PANTHER PTHR11946 615 859 0.0 T 22-04-2016 YE2996 6e88e9f10f86b2874b0d89587092e458 860 PANTHER PTHR11946 1 206 0.0 T 22-04-2016 YE2996 6e88e9f10f86b2874b0d89587092e458 860 SUPERFAMILY SSF47323 662 859 2.8E-38 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YE2996 6e88e9f10f86b2874b0d89587092e458 860 Gene3D G3DSA:3.90.740.10 223 424 3.5E-59 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 YE2996 6e88e9f10f86b2874b0d89587092e458 860 PANTHER PTHR11946:SF7 240 571 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 YE2996 6e88e9f10f86b2874b0d89587092e458 860 PANTHER PTHR11946:SF7 615 859 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 YE2996 6e88e9f10f86b2874b0d89587092e458 860 PANTHER PTHR11946:SF7 1 206 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 YE2996 6e88e9f10f86b2874b0d89587092e458 860 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YE2996 6e88e9f10f86b2874b0d89587092e458 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 418 571 6.2E-6 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YE2996 6e88e9f10f86b2874b0d89587092e458 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 15 171 4.8E-26 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YE2996 6e88e9f10f86b2874b0d89587092e458 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 618 652 3.6E-7 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YE2996 6e88e9f10f86b2874b0d89587092e458 860 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 403 2.2E-78 T 22-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 YE2785 ee54df9d90cf889b14c81bc07c2ea0c1 675 Gene3D G3DSA:3.40.50.620 183 379 5.8E-91 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YE2785 ee54df9d90cf889b14c81bc07c2ea0c1 675 Gene3D G3DSA:3.40.50.620 6 144 5.8E-91 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YE2785 ee54df9d90cf889b14c81bc07c2ea0c1 675 PANTHER PTHR11946:SF86 6 630 4.0E-255 T 22-04-2016 YE2785 ee54df9d90cf889b14c81bc07c2ea0c1 675 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 8 535 1.0E-200 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 YE2785 ee54df9d90cf889b14c81bc07c2ea0c1 675 PANTHER PTHR11946 6 630 4.0E-255 T 22-04-2016 YE2785 ee54df9d90cf889b14c81bc07c2ea0c1 675 Pfam PF09334 tRNA synthetases class I (M) 8 396 5.7E-164 T 22-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YE2785 ee54df9d90cf889b14c81bc07c2ea0c1 675 Pfam PF01588 Putative tRNA binding domain 579 672 1.5E-21 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 YE2785 ee54df9d90cf889b14c81bc07c2ea0c1 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 2.1E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 YE2785 ee54df9d90cf889b14c81bc07c2ea0c1 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 2.1E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 YE2785 ee54df9d90cf889b14c81bc07c2ea0c1 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 2.1E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 YE2785 ee54df9d90cf889b14c81bc07c2ea0c1 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 291 306 2.1E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 YE2785 ee54df9d90cf889b14c81bc07c2ea0c1 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 251 262 2.1E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 YE2785 ee54df9d90cf889b14c81bc07c2ea0c1 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 384 395 2.1E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 YE2785 ee54df9d90cf889b14c81bc07c2ea0c1 675 SUPERFAMILY SSF47323 390 546 1.18E-44 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YE2785 ee54df9d90cf889b14c81bc07c2ea0c1 675 Gene3D G3DSA:2.20.28.20 145 176 1.4E-19 T 22-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 YE2785 ee54df9d90cf889b14c81bc07c2ea0c1 675 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 26 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YE2785 ee54df9d90cf889b14c81bc07c2ea0c1 675 SUPERFAMILY SSF50249 568 674 8.32E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE2785 ee54df9d90cf889b14c81bc07c2ea0c1 675 SUPERFAMILY SSF57770 142 176 8.11E-13 T 22-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 YE2785 ee54df9d90cf889b14c81bc07c2ea0c1 675 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 538 675 7.6E-45 T 22-04-2016 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 YE2785 ee54df9d90cf889b14c81bc07c2ea0c1 675 Gene3D G3DSA:1.10.730.10 380 534 2.1E-41 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YE2785 ee54df9d90cf889b14c81bc07c2ea0c1 675 Hamap MF_00098 Methionine--tRNA ligase [metG]. 6 545 41.46 T 22-04-2016 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 YE2785 ee54df9d90cf889b14c81bc07c2ea0c1 675 Gene3D G3DSA:2.40.50.140 566 675 9.8E-38 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE2785 ee54df9d90cf889b14c81bc07c2ea0c1 675 SUPERFAMILY SSF52374 176 387 2.4E-102 T 22-04-2016 YE2785 ee54df9d90cf889b14c81bc07c2ea0c1 675 SUPERFAMILY SSF52374 6 141 2.4E-102 T 22-04-2016 YE4193 204591f4b9eb76f305ff1be2caf66b4a 284 SUPERFAMILY SSF53850 12 262 7.06E-67 T 22-04-2016 YE4193 204591f4b9eb76f305ff1be2caf66b4a 284 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 64 77 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 YE4193 204591f4b9eb76f305ff1be2caf66b4a 284 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 41 261 2.6E-59 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YE4193 204591f4b9eb76f305ff1be2caf66b4a 284 PANTHER PTHR18966:SF191 27 279 6.3E-99 T 22-04-2016 YE4193 204591f4b9eb76f305ff1be2caf66b4a 284 Gene3D G3DSA:3.40.190.10 119 201 7.6E-14 T 22-04-2016 YE4193 204591f4b9eb76f305ff1be2caf66b4a 284 PANTHER PTHR18966 27 279 6.3E-99 T 22-04-2016 YE4193 204591f4b9eb76f305ff1be2caf66b4a 284 SMART SM00062 40 263 1.2E-67 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YE4193 204591f4b9eb76f305ff1be2caf66b4a 284 Gene3D G3DSA:3.40.190.10 37 118 1.5E-41 T 22-04-2016 YE4193 204591f4b9eb76f305ff1be2caf66b4a 284 Gene3D G3DSA:3.40.190.10 222 263 1.5E-41 T 22-04-2016 YE0601 336c346b60be0f937d5cb63ed94da0a0 309 PANTHER PTHR20861:SF1 1 309 4.9E-132 T 22-04-2016 YE0601 336c346b60be0f937d5cb63ed94da0a0 309 Pfam PF08544 GHMP kinases C terminal 218 285 1.9E-8 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain YE0601 336c346b60be0f937d5cb63ed94da0a0 309 Hamap MF_00384 Homoserine kinase [thrB]. 2 307 30.024 T 22-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 YE0601 336c346b60be0f937d5cb63ed94da0a0 309 SUPERFAMILY SSF54211 1 178 2.58E-32 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YE0601 336c346b60be0f937d5cb63ed94da0a0 309 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 90 101 - T 22-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 YE0601 336c346b60be0f937d5cb63ed94da0a0 309 PRINTS PR00958 Homoserine kinase signature 97 112 1.3E-32 T 22-04-2016 YE0601 336c346b60be0f937d5cb63ed94da0a0 309 PRINTS PR00958 Homoserine kinase signature 254 269 1.3E-32 T 22-04-2016 YE0601 336c346b60be0f937d5cb63ed94da0a0 309 PRINTS PR00958 Homoserine kinase signature 9 24 1.3E-32 T 22-04-2016 YE0601 336c346b60be0f937d5cb63ed94da0a0 309 PRINTS PR00958 Homoserine kinase signature 137 150 1.3E-32 T 22-04-2016 YE0601 336c346b60be0f937d5cb63ed94da0a0 309 PRINTS PR00958 Homoserine kinase signature 175 192 1.3E-32 T 22-04-2016 YE0601 336c346b60be0f937d5cb63ed94da0a0 309 Pfam PF00288 GHMP kinases N terminal domain 84 150 3.7E-14 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 YE0601 336c346b60be0f937d5cb63ed94da0a0 309 SUPERFAMILY SSF55060 173 289 1.4E-33 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain YE0601 336c346b60be0f937d5cb63ed94da0a0 309 PANTHER PTHR20861 1 309 4.9E-132 T 22-04-2016 YE0601 336c346b60be0f937d5cb63ed94da0a0 309 Gene3D G3DSA:3.30.230.10 1 160 6.8E-48 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YE0601 336c346b60be0f937d5cb63ed94da0a0 309 TIGRFAM TIGR00191 thrB: homoserine kinase 2 307 9.6E-113 T 22-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 YE0601 336c346b60be0f937d5cb63ed94da0a0 309 Gene3D G3DSA:3.30.70.890 169 298 7.7E-42 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain YE0601 336c346b60be0f937d5cb63ed94da0a0 309 PIRSF PIRSF000676 1 308 5.3E-83 T 22-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 YE2900 e863269204429c237d2e6abffebdd7ae 307 Hamap MF_00973 Gluconeogenesis factor. 8 300 31.191 T 22-04-2016 IPR010119 Gluconeogenesis factor YE2900 e863269204429c237d2e6abffebdd7ae 307 PANTHER PTHR30135 1 307 1.2E-107 T 22-04-2016 YE2900 e863269204429c237d2e6abffebdd7ae 307 Pfam PF01933 Uncharacterised protein family UPF0052 12 296 7.8E-72 T 22-04-2016 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 YE2900 e863269204429c237d2e6abffebdd7ae 307 Gene3D G3DSA:3.40.50.10680 82 300 2.3E-49 T 22-04-2016 YE2900 e863269204429c237d2e6abffebdd7ae 307 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 12 260 8.2E-92 T 22-04-2016 IPR010119 Gluconeogenesis factor YE2900 e863269204429c237d2e6abffebdd7ae 307 SUPERFAMILY SSF142338 11 294 7.72E-79 T 22-04-2016 YE1008 862ae1981b41bf3665fe0f293ee2005d 251 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 125 131 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 YE1008 862ae1981b41bf3665fe0f293ee2005d 251 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 122 134 5.2E-5 T 22-04-2016 YE1008 862ae1981b41bf3665fe0f293ee2005d 251 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 152 176 5.2E-5 T 22-04-2016 YE1008 862ae1981b41bf3665fe0f293ee2005d 251 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 54 68 5.2E-5 T 22-04-2016 YE1008 862ae1981b41bf3665fe0f293ee2005d 251 SUPERFAMILY SSF53335 18 204 4.48E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE1008 862ae1981b41bf3665fe0f293ee2005d 251 PANTHER PTHR18895 40 241 2.3E-85 T 22-04-2016 YE1008 862ae1981b41bf3665fe0f293ee2005d 251 PANTHER PTHR18895:SF73 40 241 2.3E-85 T 22-04-2016 YE1008 862ae1981b41bf3665fe0f293ee2005d 251 Gene3D G3DSA:3.40.50.150 38 244 3.1E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE1008 862ae1981b41bf3665fe0f293ee2005d 251 Pfam PF05175 Methyltransferase small domain 45 135 1.2E-14 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 YE1008 862ae1981b41bf3665fe0f293ee2005d 251 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 17 251 55.567 T 22-04-2016 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 KEGG: 00340+2.1.1.22 YE2190 63c6d607d8bee83f574d824306d41b89 687 SUPERFAMILY SSF51735 317 650 1.78E-70 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2190 63c6d607d8bee83f574d824306d41b89 687 Pfam PF01370 NAD dependent epimerase/dehydratase family 318 566 2.5E-43 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 YE2190 63c6d607d8bee83f574d824306d41b89 687 PANTHER PTHR10366:SF253 317 672 3.3E-187 T 22-04-2016 YE2190 63c6d607d8bee83f574d824306d41b89 687 SUPERFAMILY SSF53328 1 202 2.35E-54 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YE2190 63c6d607d8bee83f574d824306d41b89 687 SUPERFAMILY SSF50486 204 304 1.29E-24 T 22-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 YE2190 63c6d607d8bee83f574d824306d41b89 687 Pfam PF02911 Formyl transferase, C-terminal domain 203 286 6.1E-17 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YE2190 63c6d607d8bee83f574d824306d41b89 687 Gene3D G3DSA:3.40.50.170 1 199 1.7E-50 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YE2190 63c6d607d8bee83f574d824306d41b89 687 Gene3D G3DSA:3.40.50.720 306 553 3.0E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2190 63c6d607d8bee83f574d824306d41b89 687 Gene3D G3DSA:3.10.25.10 204 305 2.3E-22 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YE2190 63c6d607d8bee83f574d824306d41b89 687 Pfam PF00551 Formyl transferase 26 173 3.9E-24 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YE2190 63c6d607d8bee83f574d824306d41b89 687 PANTHER PTHR10366 317 672 3.3E-187 T 22-04-2016 YE2190 63c6d607d8bee83f574d824306d41b89 687 PIRSF PIRSF036506 1 659 0.0 T 22-04-2016 IPR021168 Bifunctional polymyxin resistance protein, ArnA GO:0016742|GO:0055114 KEGG: 00072+1.1.1.30|KEGG: 00520+2.1.2.13+1.1.1.305|KEGG: 00650+1.1.1.30|UniPathway: UPA00030|UniPathway: UPA00032|UniPathway: UPA00032 YE2190 63c6d607d8bee83f574d824306d41b89 687 Hamap MF_01166 Bifunctional polymyxin resistance protein ArnA [arnA]. 1 660 63.803 T 22-04-2016 IPR021168 Bifunctional polymyxin resistance protein, ArnA GO:0016742|GO:0055114 KEGG: 00072+1.1.1.30|KEGG: 00520+2.1.2.13+1.1.1.305|KEGG: 00650+1.1.1.30|UniPathway: UPA00030|UniPathway: UPA00032|UniPathway: UPA00032 YE2190 63c6d607d8bee83f574d824306d41b89 687 Gene3D G3DSA:3.90.25.10 570 641 3.2E-43 T 22-04-2016 YE0214 b7e22320548de2fdd6e5863b77eed84c 407 PANTHER PTHR32479:SF9 2 398 2.4E-209 T 22-04-2016 YE0214 b7e22320548de2fdd6e5863b77eed84c 407 Pfam PF02754 Cysteine-rich domain 300 383 1.2E-13 T 22-04-2016 IPR004017 Cysteine-rich domain YE0214 b7e22320548de2fdd6e5863b77eed84c 407 Pfam PF02754 Cysteine-rich domain 164 250 8.4E-14 T 22-04-2016 IPR004017 Cysteine-rich domain YE0214 b7e22320548de2fdd6e5863b77eed84c 407 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 57 68 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YE0214 b7e22320548de2fdd6e5863b77eed84c 407 Pfam PF13183 4Fe-4S dicluster domain 7 71 9.0E-10 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YE0214 b7e22320548de2fdd6e5863b77eed84c 407 TIGRFAM TIGR03379 glycerol3P_GlpC: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit 4 403 1.7E-231 T 22-04-2016 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit GO:0006810|GO:0016020 UniPathway: UPA00618 YE0214 b7e22320548de2fdd6e5863b77eed84c 407 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 10 21 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YE0214 b7e22320548de2fdd6e5863b77eed84c 407 Gene3D G3DSA:1.10.1060.10 6 87 3.7E-15 T 22-04-2016 YE0214 b7e22320548de2fdd6e5863b77eed84c 407 SUPERFAMILY SSF46548 7 82 2.44E-15 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 YE0214 b7e22320548de2fdd6e5863b77eed84c 407 PANTHER PTHR32479 2 398 2.4E-209 T 22-04-2016 YE1190 9a910941666e4b434f3d4d42d4cbe887 304 Gene3D G3DSA:3.30.420.40 147 265 8.8E-42 T 22-04-2016 YE1190 9a910941666e4b434f3d4d42d4cbe887 304 ProSitePatterns PS01125 ROK family signature. 141 168 - T 22-04-2016 IPR000600 ROK family YE1190 9a910941666e4b434f3d4d42d4cbe887 304 Gene3D G3DSA:3.30.420.40 1 146 1.3E-27 T 22-04-2016 YE1190 9a910941666e4b434f3d4d42d4cbe887 304 Pfam PF00480 ROK family 5 299 2.4E-67 T 22-04-2016 IPR000600 ROK family YE1190 9a910941666e4b434f3d4d42d4cbe887 304 Hamap MF_01234 N-acetylmannosamine kinase [nanK]. 2 302 47.871 T 22-04-2016 IPR023945 N-acetylmannosamine kinase, bacterial GO:0005524|GO:0008270|GO:0009384|GO:0019262 KEGG: 00520+2.7.1.60|MetaCyc: PWY-6138|UniPathway: UPA00629 YE1190 9a910941666e4b434f3d4d42d4cbe887 304 PANTHER PTHR18964:SF140 3 302 4.7E-154 T 22-04-2016 YE1190 9a910941666e4b434f3d4d42d4cbe887 304 PANTHER PTHR18964 3 302 4.7E-154 T 22-04-2016 YE1190 9a910941666e4b434f3d4d42d4cbe887 304 SUPERFAMILY SSF53067 2 301 1.25E-50 T 22-04-2016 YE2343 68c721f0f8a7416c27165bca2f69f02b 197 Pfam PF13643 Domain of unknown function (DUF4145) 86 175 2.5E-13 T 22-04-2016 IPR025285 Domain of unknown function DUF4145 YE2511 e441a689534d2a2639c74b882f741544 338 Gene3D G3DSA:3.30.420.40 110 235 6.3E-17 T 22-04-2016 YE2511 e441a689534d2a2639c74b882f741544 338 SUPERFAMILY SSF46785 10 76 1.36E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2511 e441a689534d2a2639c74b882f741544 338 Pfam PF00480 ROK family 115 235 4.4E-9 T 22-04-2016 IPR000600 ROK family YE2511 e441a689534d2a2639c74b882f741544 338 SUPERFAMILY SSF53067 77 193 2.7E-12 T 22-04-2016 YE2511 e441a689534d2a2639c74b882f741544 338 Gene3D G3DSA:1.10.10.10 27 73 3.5E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1491 c4249ec97b4f4240f81f094a7498e024 249 PANTHER PTHR18966 27 247 2.5E-111 T 22-04-2016 YE1491 c4249ec97b4f4240f81f094a7498e024 249 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 51 64 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 YE1491 c4249ec97b4f4240f81f094a7498e024 249 PANTHER PTHR18966:SF194 27 247 2.5E-111 T 22-04-2016 YE1491 c4249ec97b4f4240f81f094a7498e024 249 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 29 248 2.0E-71 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YE1491 c4249ec97b4f4240f81f094a7498e024 249 SMART SM00062 28 248 2.8E-85 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YE1491 c4249ec97b4f4240f81f094a7498e024 249 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 3 247 1.3E-88 T 22-04-2016 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 YE1491 c4249ec97b4f4240f81f094a7498e024 249 SUPERFAMILY SSF53850 1 248 7.39E-74 T 22-04-2016 YE1491 c4249ec97b4f4240f81f094a7498e024 249 Gene3D G3DSA:3.40.190.10 209 248 7.9E-44 T 22-04-2016 YE1491 c4249ec97b4f4240f81f094a7498e024 249 Gene3D G3DSA:3.40.190.10 26 114 7.9E-44 T 22-04-2016 YE1491 c4249ec97b4f4240f81f094a7498e024 249 SMART SM00079 28 249 0.0013 T 22-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 YE1491 c4249ec97b4f4240f81f094a7498e024 249 Gene3D G3DSA:3.40.190.10 115 207 6.6E-30 T 22-04-2016 YE0374 34ae6076a58a6fcb674d1dc2810c54d9 620 Gene3D G3DSA:3.40.630.40 218 315 1.4E-58 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 YE0374 34ae6076a58a6fcb674d1dc2810c54d9 620 Gene3D G3DSA:3.40.630.40 367 442 1.4E-58 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 YE0374 34ae6076a58a6fcb674d1dc2810c54d9 620 PANTHER PTHR30404 1 162 3.4E-236 T 22-04-2016 YE0374 34ae6076a58a6fcb674d1dc2810c54d9 620 PANTHER PTHR30404 207 472 3.4E-236 T 22-04-2016 YE0374 34ae6076a58a6fcb674d1dc2810c54d9 620 Gene3D G3DSA:3.10.350.10 576 619 2.2E-17 T 22-04-2016 IPR018392 LysM domain YE0374 34ae6076a58a6fcb674d1dc2810c54d9 620 PANTHER PTHR30404:SF1 1 162 3.4E-236 T 22-04-2016 YE0374 34ae6076a58a6fcb674d1dc2810c54d9 620 PANTHER PTHR30404:SF1 207 472 3.4E-236 T 22-04-2016 YE0374 34ae6076a58a6fcb674d1dc2810c54d9 620 Gene3D G3DSA:3.10.350.10 505 550 4.6E-14 T 22-04-2016 IPR018392 LysM domain YE0374 34ae6076a58a6fcb674d1dc2810c54d9 620 SUPERFAMILY SSF54106 505 549 1.28E-9 T 22-04-2016 IPR018392 LysM domain YE0374 34ae6076a58a6fcb674d1dc2810c54d9 620 Pfam PF01476 LysM domain 576 618 2.1E-13 T 22-04-2016 IPR018392 LysM domain YE0374 34ae6076a58a6fcb674d1dc2810c54d9 620 Pfam PF01476 LysM domain 507 549 2.7E-9 T 22-04-2016 IPR018392 LysM domain YE0374 34ae6076a58a6fcb674d1dc2810c54d9 620 Pfam PF11741 AMIN domain 20 114 1.5E-7 T 22-04-2016 IPR021731 AMIN domain YE0374 34ae6076a58a6fcb674d1dc2810c54d9 620 SUPERFAMILY SSF53187 366 442 4.08E-52 T 22-04-2016 YE0374 34ae6076a58a6fcb674d1dc2810c54d9 620 SUPERFAMILY SSF53187 218 314 4.08E-52 T 22-04-2016 YE0374 34ae6076a58a6fcb674d1dc2810c54d9 620 SMART SM00646 280 439 1.2E-72 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 YE0374 34ae6076a58a6fcb674d1dc2810c54d9 620 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 220 439 3.6E-48 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 YE0374 34ae6076a58a6fcb674d1dc2810c54d9 620 SUPERFAMILY SSF54106 575 618 6.28E-11 T 22-04-2016 IPR018392 LysM domain YE0374 34ae6076a58a6fcb674d1dc2810c54d9 620 SMART SM00257 506 549 1.3E-10 T 22-04-2016 IPR018392 LysM domain YE0374 34ae6076a58a6fcb674d1dc2810c54d9 620 SMART SM00257 575 618 1.3E-16 T 22-04-2016 IPR018392 LysM domain YE0940 2a87be951f9f5e5360ee4d71855f0ca3 70 Gene3D G3DSA:2.40.50.140 5 68 1.7E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE0940 2a87be951f9f5e5360ee4d71855f0ca3 70 SUPERFAMILY SSF50249 3 69 1.49E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE0940 2a87be951f9f5e5360ee4d71855f0ca3 70 PRINTS PR00050 Cold shock protein signature 43 61 6.3E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YE0940 2a87be951f9f5e5360ee4d71855f0ca3 70 PRINTS PR00050 Cold shock protein signature 7 22 6.3E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YE0940 2a87be951f9f5e5360ee4d71855f0ca3 70 PRINTS PR00050 Cold shock protein signature 28 37 6.3E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YE0940 2a87be951f9f5e5360ee4d71855f0ca3 70 PIRSF PIRSF002599 1 70 1.7E-24 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 YE0940 2a87be951f9f5e5360ee4d71855f0ca3 70 PANTHER PTHR11544 1 70 4.2E-48 T 22-04-2016 YE0940 2a87be951f9f5e5360ee4d71855f0ca3 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 22-04-2016 IPR019844 Cold-shock conserved site YE0940 2a87be951f9f5e5360ee4d71855f0ca3 70 PANTHER PTHR11544:SF54 1 70 4.2E-48 T 22-04-2016 YE0940 2a87be951f9f5e5360ee4d71855f0ca3 70 SMART SM00357 6 70 3.3E-31 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 YE0940 2a87be951f9f5e5360ee4d71855f0ca3 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 1.9E-32 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YE0241 838bfafcc2c3d8243e58c9c65a5107f5 439 Gene3D G3DSA:3.40.190.10 147 347 1.8E-40 T 22-04-2016 YE0241 838bfafcc2c3d8243e58c9c65a5107f5 439 Pfam PF13416 Bacterial extracellular solute-binding protein 46 369 3.4E-41 T 22-04-2016 YE0241 838bfafcc2c3d8243e58c9c65a5107f5 439 PANTHER PTHR30061:SF7 11 439 3.6E-172 T 22-04-2016 YE0241 838bfafcc2c3d8243e58c9c65a5107f5 439 PANTHER PTHR30061 11 439 3.6E-172 T 22-04-2016 YE0241 838bfafcc2c3d8243e58c9c65a5107f5 439 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 142 159 - T 22-04-2016 IPR006061 Solute-binding family 1, conserved site GO:0005215|GO:0006810 YE0241 838bfafcc2c3d8243e58c9c65a5107f5 439 SUPERFAMILY SSF53850 27 426 1.04E-73 T 22-04-2016 YE3707 458f14a9132002d70774113b43db930d 483 Hamap MF_00670 Altronate oxidoreductase [uxaB]. 1 483 53.514 T 22-04-2016 IPR023668 Altronate oxidoreductase GO:0009026|GO:0055114 KEGG: 00040+1.1.1.58|UniPathway: UPA00246 YE3707 458f14a9132002d70774113b43db930d 483 Gene3D G3DSA:3.40.50.720 3 264 3.8E-69 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3707 458f14a9132002d70774113b43db930d 483 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 17 172 6.3E-30 T 22-04-2016 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 YE3707 458f14a9132002d70774113b43db930d 483 SUPERFAMILY SSF48179 273 482 1.05E-50 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 YE3707 458f14a9132002d70774113b43db930d 483 Gene3D G3DSA:1.10.1040.10 272 482 1.4E-67 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 YE3707 458f14a9132002d70774113b43db930d 483 PANTHER PTHR30524 2 483 0.0 T 22-04-2016 YE3707 458f14a9132002d70774113b43db930d 483 PANTHER PTHR30524:SF1 2 483 0.0 T 22-04-2016 YE3707 458f14a9132002d70774113b43db930d 483 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 203 458 3.7E-69 T 22-04-2016 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 YE3707 458f14a9132002d70774113b43db930d 483 SUPERFAMILY SSF51735 2 265 4.33E-67 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3546 1aab7161fc703c60999e603b63424009 690 PANTHER PTHR30161 1 690 4.8E-290 T 22-04-2016 YE3546 1aab7161fc703c60999e603b63424009 690 Pfam PF00771 FHIPEP family 26 682 2.4E-220 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YE3546 1aab7161fc703c60999e603b63424009 690 PIRSF PIRSF005419 2 690 2.0E-213 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YE3546 1aab7161fc703c60999e603b63424009 690 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 132 148 3.0E-57 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YE3546 1aab7161fc703c60999e603b63424009 690 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 181 198 3.0E-57 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YE3546 1aab7161fc703c60999e603b63424009 690 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 70 89 3.0E-57 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YE3546 1aab7161fc703c60999e603b63424009 690 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 151 169 3.0E-57 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YE3546 1aab7161fc703c60999e603b63424009 690 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 232 246 3.0E-57 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YE3546 1aab7161fc703c60999e603b63424009 690 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 33 46 3.0E-57 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YE3546 1aab7161fc703c60999e603b63424009 690 PANTHER PTHR30161:SF2 1 690 4.8E-290 T 22-04-2016 YE3546 1aab7161fc703c60999e603b63424009 690 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 137 160 - T 22-04-2016 IPR025505 FHIPEP conserved site YE3546 1aab7161fc703c60999e603b63424009 690 TIGRFAM TIGR01399 hrcV: type III secretion protein, HrcV family 14 690 1.3E-250 T 22-04-2016 IPR006302 Type III secretion protein HrcV GO:0015031|GO:0016021 YE2009 f6ac6e262ea674c186be8d899986c512 332 PANTHER PTHR11409 5 331 1.6E-103 T 22-04-2016 YE2009 f6ac6e262ea674c186be8d899986c512 332 Pfam PF00962 Adenosine/AMP deaminase 6 329 1.7E-95 T 22-04-2016 IPR001365 Adenosine/AMP deaminase domain GO:0019239 YE2009 f6ac6e262ea674c186be8d899986c512 332 Gene3D G3DSA:3.20.20.140 5 330 3.6E-96 T 22-04-2016 YE2009 f6ac6e262ea674c186be8d899986c512 332 Hamap MF_00540 Adenosine deaminase [add]. 1 331 52.596 T 22-04-2016 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 YE2009 f6ac6e262ea674c186be8d899986c512 332 ProSitePatterns PS00485 Adenosine and AMP deaminase signature. 274 280 - T 22-04-2016 IPR006650 Adenosine/AMP deaminase active site GO:0009168|GO:0019239 Reactome: REACT_1698 YE2009 f6ac6e262ea674c186be8d899986c512 332 SUPERFAMILY SSF51556 5 326 1.44E-74 T 22-04-2016 IPR032466 Metal-dependent hydrolase YE2009 f6ac6e262ea674c186be8d899986c512 332 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 6 330 8.8E-106 T 22-04-2016 IPR006330 Adenosine/adenine deaminase GO:0019239 YE3959 9c93a2ef92421ca2005fb86118dec50a 487 PANTHER PTHR30121 3 426 2.8E-184 T 22-04-2016 YE3959 9c93a2ef92421ca2005fb86118dec50a 487 SMART SM00382 7 314 0.0095 T 22-04-2016 IPR003593 AAA+ ATPase domain YE3959 9c93a2ef92421ca2005fb86118dec50a 487 PANTHER PTHR30121:SF3 3 426 2.8E-184 T 22-04-2016 YE3959 9c93a2ef92421ca2005fb86118dec50a 487 Pfam PF05872 Bacterial protein of unknown function (DUF853) 3 487 6.9E-231 T 22-04-2016 IPR033186 Helicase HerA-like C-terminal YE3959 9c93a2ef92421ca2005fb86118dec50a 487 SUPERFAMILY SSF52540 8 354 4.19E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3959 9c93a2ef92421ca2005fb86118dec50a 487 Gene3D G3DSA:3.40.50.300 6 93 8.7E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3959 9c93a2ef92421ca2005fb86118dec50a 487 Gene3D G3DSA:3.40.50.300 189 366 8.7E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1326a c1a3fa24e21fd60f07f048eb2f3853fc 169 Gene3D G3DSA:3.30.70.1290 16 149 2.3E-55 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YE1326a c1a3fa24e21fd60f07f048eb2f3853fc 169 SUPERFAMILY SSF143422 18 146 3.4E-46 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YE1326a c1a3fa24e21fd60f07f048eb2f3853fc 169 Pfam PF01797 Transposase IS200 like 29 146 1.1E-35 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YE1326a c1a3fa24e21fd60f07f048eb2f3853fc 169 SMART SM01321 28 146 3.5E-38 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YE1326a c1a3fa24e21fd60f07f048eb2f3853fc 169 PANTHER PTHR33360 19 162 1.3E-91 T 22-04-2016 YE1326a c1a3fa24e21fd60f07f048eb2f3853fc 169 PANTHER PTHR33360:SF2 19 162 1.3E-91 T 22-04-2016 YE2016 b9dedc2618bf1b5a639bd2abd52792c3 464 Gene3D G3DSA:1.20.200.10 139 416 2.2E-104 T 22-04-2016 YE2016 b9dedc2618bf1b5a639bd2abd52792c3 464 Gene3D G3DSA:1.10.275.10 4 138 2.7E-60 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal YE2016 b9dedc2618bf1b5a639bd2abd52792c3 464 PRINTS PR00145 Argininosuccinate lyase family signature 317 333 1.1E-5 T 22-04-2016 YE2016 b9dedc2618bf1b5a639bd2abd52792c3 464 PRINTS PR00145 Argininosuccinate lyase family signature 175 195 1.1E-5 T 22-04-2016 YE2016 b9dedc2618bf1b5a639bd2abd52792c3 464 PANTHER PTHR11444 4 461 1.9E-251 T 22-04-2016 IPR000362 Fumarate lyase family YE2016 b9dedc2618bf1b5a639bd2abd52792c3 464 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 5 461 9.3E-244 T 22-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 YE2016 b9dedc2618bf1b5a639bd2abd52792c3 464 PANTHER PTHR11444:SF1 4 461 1.9E-251 T 22-04-2016 YE2016 b9dedc2618bf1b5a639bd2abd52792c3 464 Gene3D G3DSA:1.10.40.30 417 462 2.6E-33 T 22-04-2016 YE2016 b9dedc2618bf1b5a639bd2abd52792c3 464 Pfam PF00206 Lyase 12 342 2.1E-118 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal YE2016 b9dedc2618bf1b5a639bd2abd52792c3 464 PRINTS PR00149 Fumarate lyase superfamily signature 271 298 2.6E-33 T 22-04-2016 IPR000362 Fumarate lyase family YE2016 b9dedc2618bf1b5a639bd2abd52792c3 464 PRINTS PR00149 Fumarate lyase superfamily signature 134 152 2.6E-33 T 22-04-2016 IPR000362 Fumarate lyase family YE2016 b9dedc2618bf1b5a639bd2abd52792c3 464 PRINTS PR00149 Fumarate lyase superfamily signature 180 198 2.6E-33 T 22-04-2016 IPR000362 Fumarate lyase family YE2016 b9dedc2618bf1b5a639bd2abd52792c3 464 PRINTS PR00149 Fumarate lyase superfamily signature 317 333 2.6E-33 T 22-04-2016 IPR000362 Fumarate lyase family YE2016 b9dedc2618bf1b5a639bd2abd52792c3 464 Hamap MF_00743 Fumarate hydratase class II [fumC]. 4 462 91.845 T 22-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 YE2016 b9dedc2618bf1b5a639bd2abd52792c3 464 Pfam PF10415 Fumarase C C-terminus 408 461 2.3E-26 T 22-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 YE2016 b9dedc2618bf1b5a639bd2abd52792c3 464 ProSitePatterns PS00163 Fumarate lyases signature. 317 326 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 YE2016 b9dedc2618bf1b5a639bd2abd52792c3 464 SUPERFAMILY SSF48557 4 462 3.77E-158 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 YE0476 15eef6340cc57abf1a204d5d000816e7 193 PIRSF PIRSF020680 1 193 3.9E-56 T 22-04-2016 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 YE0476 15eef6340cc57abf1a204d5d000816e7 193 TIGRFAM TIGR03292 PhnH_redo: phosphonate C-P lyase system protein PhnH 7 189 5.8E-53 T 22-04-2016 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 YE0476 15eef6340cc57abf1a204d5d000816e7 193 Pfam PF05845 Bacterial phosphonate metabolism protein (PhnH) 6 191 2.1E-61 T 22-04-2016 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 YE0476 15eef6340cc57abf1a204d5d000816e7 193 SUPERFAMILY SSF159709 13 192 7.06E-56 T 22-04-2016 YE2863 b41ea1a9d35a73b594201447fff08229 314 PANTHER PTHR24220 3 314 5.1E-156 T 22-04-2016 YE2863 b41ea1a9d35a73b594201447fff08229 314 SMART SM00382 26 213 2.4E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain YE2863 b41ea1a9d35a73b594201447fff08229 314 SUPERFAMILY SSF54631 256 306 4.32E-5 T 22-04-2016 YE2863 b41ea1a9d35a73b594201447fff08229 314 Pfam PF00005 ABC transporter 17 163 3.5E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE2863 b41ea1a9d35a73b594201447fff08229 314 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE2863 b41ea1a9d35a73b594201447fff08229 314 SUPERFAMILY SSF52540 1 240 9.1E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2863 b41ea1a9d35a73b594201447fff08229 314 Gene3D G3DSA:3.40.50.300 1 235 7.2E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2863 b41ea1a9d35a73b594201447fff08229 314 Gene3D G3DSA:3.10.580.10 237 306 7.3E-5 T 22-04-2016 YE2863 b41ea1a9d35a73b594201447fff08229 314 PANTHER PTHR24220:SF434 3 314 5.1E-156 T 22-04-2016 YE0418 18ee1af44a468da1c4cdd671caf5799a 103 PANTHER PTHR21349 1 101 8.4E-47 T 22-04-2016 YE0418 18ee1af44a468da1c4cdd671caf5799a 103 SUPERFAMILY SSF141091 1 102 5.76E-37 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 YE0418 18ee1af44a468da1c4cdd671caf5799a 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 1.4E-43 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0418 18ee1af44a468da1c4cdd671caf5799a 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 1.8E-38 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 YE0418 18ee1af44a468da1c4cdd671caf5799a 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 26.825 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0418 18ee1af44a468da1c4cdd671caf5799a 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 22-04-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3145 f4df5a828198db51da2217496e557c05 296 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 4 282 2.8E-92 T 22-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 YE3145 f4df5a828198db51da2217496e557c05 296 PANTHER PTHR11048 1 288 1.2E-159 T 22-04-2016 YE3145 f4df5a828198db51da2217496e557c05 296 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 57 79 - T 22-04-2016 IPR030470 UbiA prenyltransferase conserved site YE3145 f4df5a828198db51da2217496e557c05 296 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 2 284 18.277 T 22-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 YE3145 f4df5a828198db51da2217496e557c05 296 Pfam PF01040 UbiA prenyltransferase family 19 267 8.8E-61 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 YE3145 f4df5a828198db51da2217496e557c05 296 PANTHER PTHR11048:SF20 1 288 1.2E-159 T 22-04-2016 YE0066 52280e3b71f054ccfda1df48f0c1b0b2 269 SUPERFAMILY SSF57716 217 268 1.74E-16 T 22-04-2016 YE0066 52280e3b71f054ccfda1df48f0c1b0b2 269 PANTHER PTHR22993:SF15 1 268 6.0E-138 T 22-04-2016 YE0066 52280e3b71f054ccfda1df48f0c1b0b2 269 PANTHER PTHR22993 1 268 6.0E-138 T 22-04-2016 YE0066 52280e3b71f054ccfda1df48f0c1b0b2 269 Gene3D G3DSA:3.20.190.10 2 129 4.4E-37 T 22-04-2016 YE0066 52280e3b71f054ccfda1df48f0c1b0b2 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 1.5E-26 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 YE0066 52280e3b71f054ccfda1df48f0c1b0b2 269 SMART SM01232 129 221 1.7E-48 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 YE0066 52280e3b71f054ccfda1df48f0c1b0b2 269 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 43.553 T 22-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 YE0066 52280e3b71f054ccfda1df48f0c1b0b2 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 4.2E-31 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 YE0066 52280e3b71f054ccfda1df48f0c1b0b2 269 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 2.7E-102 T 22-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 YE0066 52280e3b71f054ccfda1df48f0c1b0b2 269 SUPERFAMILY SSF81624 2 138 8.63E-44 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 YE0066 52280e3b71f054ccfda1df48f0c1b0b2 269 ProSitePatterns PS01242 Zinc finger FPG-type signature. 244 268 - T 22-04-2016 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 YE0066 52280e3b71f054ccfda1df48f0c1b0b2 269 Pfam PF06827 Zinc finger found in FPG and IleRS 241 269 8.6E-10 T 22-04-2016 IPR010663 Zinc finger, FPG/IleRS-type YE0066 52280e3b71f054ccfda1df48f0c1b0b2 269 SMART SM00898 2 115 2.7E-55 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 YE0066 52280e3b71f054ccfda1df48f0c1b0b2 269 SUPERFAMILY SSF46946 130 222 3.14E-30 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 YE0066 52280e3b71f054ccfda1df48f0c1b0b2 269 Gene3D G3DSA:1.10.8.50 130 269 2.5E-50 T 22-04-2016 YE1076 8cce210f46fb2d0fde5815d7831de96d 393 PANTHER PTHR32303:SF8 1 384 1.6E-179 T 22-04-2016 YE1076 8cce210f46fb2d0fde5815d7831de96d 393 SUPERFAMILY SSF50998 24 385 7.56E-77 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily YE1076 8cce210f46fb2d0fde5815d7831de96d 393 Pfam PF13360 PQQ-like domain 78 320 5.9E-51 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat YE1076 8cce210f46fb2d0fde5815d7831de96d 393 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 2 393 40.871 T 22-04-2016 IPR017687 Outer membrane protein assembly factor BamB YE1076 8cce210f46fb2d0fde5815d7831de96d 393 SMART SM00564 330 362 8.1 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat YE1076 8cce210f46fb2d0fde5815d7831de96d 393 SMART SM00564 252 283 7.7E-6 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat YE1076 8cce210f46fb2d0fde5815d7831de96d 393 SMART SM00564 115 147 0.37 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat YE1076 8cce210f46fb2d0fde5815d7831de96d 393 SMART SM00564 201 232 56.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat YE1076 8cce210f46fb2d0fde5815d7831de96d 393 SMART SM00564 65 96 6.2 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat YE1076 8cce210f46fb2d0fde5815d7831de96d 393 SMART SM00564 156 187 2.8E-4 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat YE1076 8cce210f46fb2d0fde5815d7831de96d 393 SMART SM00564 289 321 120.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat YE1076 8cce210f46fb2d0fde5815d7831de96d 393 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 6 392 4.7E-135 T 22-04-2016 IPR017687 Outer membrane protein assembly factor BamB YE1076 8cce210f46fb2d0fde5815d7831de96d 393 PANTHER PTHR32303 1 384 1.6E-179 T 22-04-2016 YE1076 8cce210f46fb2d0fde5815d7831de96d 393 Gene3D G3DSA:2.140.10.10 1 392 7.1E-77 T 22-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain YE1322 02cf8afcac31c4ef00ff855f687a5228 2110 SUPERFAMILY SSF51120 1417 1618 2.7E-8 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal YE1322 02cf8afcac31c4ef00ff855f687a5228 2110 Gene3D G3DSA:2.150.10.10 1411 1470 4.9E-12 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal YE1322 02cf8afcac31c4ef00ff855f687a5228 2110 Gene3D G3DSA:2.150.10.10 1520 1636 4.9E-12 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal YE1322 02cf8afcac31c4ef00ff855f687a5228 2110 Gene3D G3DSA:2.150.10.10 1736 1801 1.0E-31 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal YE1322 02cf8afcac31c4ef00ff855f687a5228 2110 Gene3D G3DSA:2.150.10.10 1904 2053 1.0E-31 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal YE1322 02cf8afcac31c4ef00ff855f687a5228 2110 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1946 1964 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site YE1322 02cf8afcac31c4ef00ff855f687a5228 2110 SUPERFAMILY SSF51120 1897 2048 1.1E-20 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal YE1322 02cf8afcac31c4ef00ff855f687a5228 2110 PRINTS PR00313 NodO calcium binding signature 1977 1986 2.6E-9 T 22-04-2016 YE1322 02cf8afcac31c4ef00ff855f687a5228 2110 PRINTS PR00313 NodO calcium binding signature 1539 1550 2.6E-9 T 22-04-2016 YE1322 02cf8afcac31c4ef00ff855f687a5228 2110 PRINTS PR00313 NodO calcium binding signature 1941 1949 2.6E-9 T 22-04-2016 YE1322 02cf8afcac31c4ef00ff855f687a5228 2110 PRINTS PR00313 NodO calcium binding signature 1950 1958 2.6E-9 T 22-04-2016 YE1538 30dbde39b37cf5016a9713693188acc6 428 SUPERFAMILY SSF55205 4 424 4.45E-145 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 YE1538 30dbde39b37cf5016a9713693188acc6 428 PIRSF PIRSF000505 2 428 9.0E-155 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 YE1538 30dbde39b37cf5016a9713693188acc6 428 Gene3D G3DSA:3.65.10.10 239 424 3.4E-73 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 YE1538 30dbde39b37cf5016a9713693188acc6 428 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 9 421 2.9E-153 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 YE1538 30dbde39b37cf5016a9713693188acc6 428 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 15 425 3.9E-143 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 YE1538 30dbde39b37cf5016a9713693188acc6 428 Gene3D G3DSA:3.65.10.10 23 238 4.5E-68 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 YE1538 30dbde39b37cf5016a9713693188acc6 428 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 11 427 35.712 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 YE1538 30dbde39b37cf5016a9713693188acc6 428 ProSitePatterns PS00104 EPSP synthase signature 1. 91 105 - T 22-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 YE1538 30dbde39b37cf5016a9713693188acc6 428 ProSitePatterns PS00885 EPSP synthase signature 2. 339 357 - T 22-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 YE1538 30dbde39b37cf5016a9713693188acc6 428 PANTHER PTHR21090 3 425 7.8E-217 T 22-04-2016 YE1446 56a89d3fce66ad97a76c0dd25b52de49 140 SUPERFAMILY SSF55811 4 133 3.66E-34 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YE1446 56a89d3fce66ad97a76c0dd25b52de49 140 ProSitePatterns PS00893 Nudix box signature. 36 57 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 YE1446 56a89d3fce66ad97a76c0dd25b52de49 140 PANTHER PTHR22769 1 135 2.9E-29 T 22-04-2016 YE1446 56a89d3fce66ad97a76c0dd25b52de49 140 Gene3D G3DSA:3.90.79.10 2 133 8.2E-35 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YE1446 56a89d3fce66ad97a76c0dd25b52de49 140 Pfam PF00293 NUDIX domain 5 127 2.3E-27 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 YE1446 56a89d3fce66ad97a76c0dd25b52de49 140 PRINTS PR00502 NUDIX hydrolase family signature 45 60 2.0E-8 T 22-04-2016 IPR020476 NUDIX hydrolase YE1446 56a89d3fce66ad97a76c0dd25b52de49 140 PRINTS PR00502 NUDIX hydrolase family signature 31 45 2.0E-8 T 22-04-2016 IPR020476 NUDIX hydrolase YE1446 56a89d3fce66ad97a76c0dd25b52de49 140 PANTHER PTHR22769:SF33 1 135 2.9E-29 T 22-04-2016 YE2722 7bd0093f677caffa4abf2fa88fdc5bf9 388 TIGRFAM TIGR00312 cbiD: cobalamin biosynthesis protein CbiD 34 377 2.3E-89 T 22-04-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 YE2722 7bd0093f677caffa4abf2fa88fdc5bf9 388 PIRSF PIRSF026782 23 384 2.8E-131 T 22-04-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 YE2722 7bd0093f677caffa4abf2fa88fdc5bf9 388 PANTHER PTHR35863:SF1 16 388 2.8E-131 T 22-04-2016 YE2722 7bd0093f677caffa4abf2fa88fdc5bf9 388 Hamap MF_00787 Cobalt-precorrin-5B C(1)-methyltransferase [cbiD]. 27 377 31.154 T 22-04-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 YE2722 7bd0093f677caffa4abf2fa88fdc5bf9 388 PANTHER PTHR35863 16 388 2.8E-131 T 22-04-2016 YE2722 7bd0093f677caffa4abf2fa88fdc5bf9 388 Gene3D G3DSA:3.30.2110.10 29 198 3.4E-54 T 22-04-2016 YE2722 7bd0093f677caffa4abf2fa88fdc5bf9 388 Pfam PF01888 CbiD 28 283 2.4E-94 T 22-04-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 YE2722 7bd0093f677caffa4abf2fa88fdc5bf9 388 SUPERFAMILY SSF111342 9 301 8.76E-89 T 22-04-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 YE3205 a352f14a13286550c9e2d90e0bc9876f 152 Gene3D G3DSA:3.40.50.2020 1 145 1.1E-42 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YE3205 a352f14a13286550c9e2d90e0bc9876f 152 SUPERFAMILY SSF53271 4 144 1.97E-30 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YE3205 a352f14a13286550c9e2d90e0bc9876f 152 PANTHER PTHR39563 2 152 3.4E-113 T 22-04-2016 YE3205 a352f14a13286550c9e2d90e0bc9876f 152 Pfam PF00156 Phosphoribosyl transferase domain 10 145 3.6E-17 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 YE3205 a352f14a13286550c9e2d90e0bc9876f 152 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 152 40.363 T 22-04-2016 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22|UniPathway: UPA00602 YE0114 e3ec5db9440f86641d830e3e16953160 294 PANTHER PTHR21091 149 280 4.3E-46 T 22-04-2016 YE0114 e3ec5db9440f86641d830e3e16953160 294 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 25 290 8.3E-105 T 22-04-2016 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 YE0114 e3ec5db9440f86641d830e3e16953160 294 Pfam PF02219 Methylenetetrahydrofolate reductase 16 291 4.7E-110 T 22-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 YE0114 e3ec5db9440f86641d830e3e16953160 294 Gene3D G3DSA:3.20.20.220 11 293 7.7E-108 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like YE0114 e3ec5db9440f86641d830e3e16953160 294 SUPERFAMILY SSF51730 22 293 9.61E-97 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like YE2470 565c2420936a15d9627336d70187c2c4 477 SUPERFAMILY SSF53383 60 465 1.77E-92 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YE2470 565c2420936a15d9627336d70187c2c4 477 PANTHER PTHR11751 85 467 2.0E-198 T 22-04-2016 YE2470 565c2420936a15d9627336d70187c2c4 477 Gene3D G3DSA:3.90.1150.10 347 464 9.5E-7 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YE2470 565c2420936a15d9627336d70187c2c4 477 Gene3D G3DSA:3.40.640.10 145 346 1.5E-69 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YE2470 565c2420936a15d9627336d70187c2c4 477 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 4.3E-14 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YE2470 565c2420936a15d9627336d70187c2c4 477 Pfam PF00155 Aminotransferase class I and II 146 456 3.3E-31 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YE2470 565c2420936a15d9627336d70187c2c4 477 SUPERFAMILY SSF46785 1 70 7.12E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2470 565c2420936a15d9627336d70187c2c4 477 PANTHER PTHR11751:SF314 85 467 2.0E-198 T 22-04-2016 YE2470 565c2420936a15d9627336d70187c2c4 477 Gene3D G3DSA:1.10.10.10 2 67 6.9E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2470 565c2420936a15d9627336d70187c2c4 477 SMART SM00345 7 66 5.9E-16 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YE1709 5055ed3066dec0ab18a9b53b3c729ec2 1148 SUPERFAMILY SSF52540 779 987 5.75E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1709 5055ed3066dec0ab18a9b53b3c729ec2 1148 SUPERFAMILY SSF141259 468 545 3.27E-24 T 22-04-2016 IPR003711 CarD-like/TRCF domain YE1709 5055ed3066dec0ab18a9b53b3c729ec2 1148 Gene3D G3DSA:3.30.2060.10 130 207 6.8E-14 T 22-04-2016 YE1709 5055ed3066dec0ab18a9b53b3c729ec2 1148 Gene3D G3DSA:3.40.50.300 795 960 2.8E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1709 5055ed3066dec0ab18a9b53b3c729ec2 1148 Pfam PF00271 Helicase conserved C-terminal domain 803 906 1.4E-18 T 22-04-2016 IPR001650 Helicase, C-terminal YE1709 5055ed3066dec0ab18a9b53b3c729ec2 1148 SUPERFAMILY SSF143517 992 1144 1.83E-43 T 22-04-2016 YE1709 5055ed3066dec0ab18a9b53b3c729ec2 1148 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 145 1079 0.0 T 22-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 YE1709 5055ed3066dec0ab18a9b53b3c729ec2 1148 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 32 1138 28.766 T 22-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 YE1709 5055ed3066dec0ab18a9b53b3c729ec2 1148 SMART SM00490 823 907 4.0E-19 T 22-04-2016 IPR001650 Helicase, C-terminal YE1709 5055ed3066dec0ab18a9b53b3c729ec2 1148 SMART SM00487 597 787 6.0E-33 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain YE1709 5055ed3066dec0ab18a9b53b3c729ec2 1148 SUPERFAMILY SSF52540 520 780 1.96E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1709 5055ed3066dec0ab18a9b53b3c729ec2 1148 SUPERFAMILY SSF52540 351 463 2.18E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1709 5055ed3066dec0ab18a9b53b3c729ec2 1148 SMART SM01058 476 573 1.5E-52 T 22-04-2016 IPR003711 CarD-like/TRCF domain YE1709 5055ed3066dec0ab18a9b53b3c729ec2 1148 SMART SM00982 1005 1105 1.6E-47 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 YE1709 5055ed3066dec0ab18a9b53b3c729ec2 1148 Pfam PF00270 DEAD/DEAH box helicase 602 762 5.0E-19 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YE1709 5055ed3066dec0ab18a9b53b3c729ec2 1148 Pfam PF03461 TRCF domain 1007 1097 2.9E-27 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 YE1709 5055ed3066dec0ab18a9b53b3c729ec2 1148 PANTHER PTHR14025 383 1139 0.0 T 22-04-2016 YE1709 5055ed3066dec0ab18a9b53b3c729ec2 1148 Gene3D G3DSA:3.40.50.300 584 783 9.6E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1709 5055ed3066dec0ab18a9b53b3c729ec2 1148 SUPERFAMILY SSF52540 7 341 2.3E-104 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1709 5055ed3066dec0ab18a9b53b3c729ec2 1148 PANTHER PTHR14025:SF21 383 1139 0.0 T 22-04-2016 YE1709 5055ed3066dec0ab18a9b53b3c729ec2 1148 Pfam PF02559 CarD-like/TRCF domain 477 572 7.3E-25 T 22-04-2016 IPR003711 CarD-like/TRCF domain YE1064 78c68d5954294dce91d9388a976d1510 427 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 105 417 1.5E-102 T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 YE1064 78c68d5954294dce91d9388a976d1510 427 Gene3D G3DSA:3.40.630.10 94 424 1.1E-119 T 22-04-2016 YE1064 78c68d5954294dce91d9388a976d1510 427 Hamap MF_00504 Peptidase B [pepB]. 1 423 68.031 T 22-04-2016 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 YE1064 78c68d5954294dce91d9388a976d1510 427 PANTHER PTHR11963 39 427 3.9E-270 T 22-04-2016 YE1064 78c68d5954294dce91d9388a976d1510 427 Pfam PF12404 Peptidase 1 77 9.9E-35 T 22-04-2016 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 YE1064 78c68d5954294dce91d9388a976d1510 427 PANTHER PTHR11963:SF20 39 427 3.9E-270 T 22-04-2016 YE1064 78c68d5954294dce91d9388a976d1510 427 PIRSF PIRSF036388 1 427 3.8E-236 T 22-04-2016 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 YE1064 78c68d5954294dce91d9388a976d1510 427 PRINTS PR00481 Cytosol aminopeptidase signature 186 203 1.4E-47 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 YE1064 78c68d5954294dce91d9388a976d1510 427 PRINTS PR00481 Cytosol aminopeptidase signature 245 266 1.4E-47 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 YE1064 78c68d5954294dce91d9388a976d1510 427 PRINTS PR00481 Cytosol aminopeptidase signature 295 310 1.4E-47 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 YE1064 78c68d5954294dce91d9388a976d1510 427 PRINTS PR00481 Cytosol aminopeptidase signature 208 229 1.4E-47 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 YE1064 78c68d5954294dce91d9388a976d1510 427 PRINTS PR00481 Cytosol aminopeptidase signature 267 287 1.4E-47 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 YE1064 78c68d5954294dce91d9388a976d1510 427 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 271 278 - T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 YE1064 78c68d5954294dce91d9388a976d1510 427 SUPERFAMILY SSF53187 103 422 6.28E-104 T 22-04-2016 YE0244 11f3d0907486edab0645ade5d9ee6a2b 362 Gene3D G3DSA:2.40.50.140 283 344 1.1E-11 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE0244 11f3d0907486edab0645ade5d9ee6a2b 362 Gene3D G3DSA:2.40.50.100 346 359 5.9E-7 T 22-04-2016 YE0244 11f3d0907486edab0645ade5d9ee6a2b 362 Gene3D G3DSA:2.40.50.100 240 282 5.9E-7 T 22-04-2016 YE0244 11f3d0907486edab0645ade5d9ee6a2b 362 Pfam PF08402 TOBE domain 278 352 1.2E-5 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 YE0244 11f3d0907486edab0645ade5d9ee6a2b 362 SMART SM00382 29 212 1.7E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YE0244 11f3d0907486edab0645ade5d9ee6a2b 362 Gene3D G3DSA:3.40.50.300 3 235 3.2E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0244 11f3d0907486edab0645ade5d9ee6a2b 362 Pfam PF00005 ABC transporter 21 162 3.9E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE0244 11f3d0907486edab0645ade5d9ee6a2b 362 PANTHER PTHR24220:SF151 5 288 2.6E-167 T 22-04-2016 YE0244 11f3d0907486edab0645ade5d9ee6a2b 362 SUPERFAMILY SSF52540 4 242 8.72E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0244 11f3d0907486edab0645ade5d9ee6a2b 362 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE0244 11f3d0907486edab0645ade5d9ee6a2b 362 SUPERFAMILY SSF50331 237 360 6.56E-26 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal YE0244 11f3d0907486edab0645ade5d9ee6a2b 362 PANTHER PTHR24220 5 288 2.6E-167 T 22-04-2016 YE2847 fa0b6bdffac3279dbc3a4982cacef4c5 240 PANTHER PTHR24220:SF569 3 239 6.2E-160 T 22-04-2016 YE2847 fa0b6bdffac3279dbc3a4982cacef4c5 240 SMART SM00382 26 213 4.5E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain YE2847 fa0b6bdffac3279dbc3a4982cacef4c5 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE2847 fa0b6bdffac3279dbc3a4982cacef4c5 240 PIRSF PIRSF039085 1 240 1.8E-108 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 YE2847 fa0b6bdffac3279dbc3a4982cacef4c5 240 PANTHER PTHR24220 3 239 6.2E-160 T 22-04-2016 YE2847 fa0b6bdffac3279dbc3a4982cacef4c5 240 Pfam PF00005 ABC transporter 17 165 4.8E-36 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE2847 fa0b6bdffac3279dbc3a4982cacef4c5 240 SUPERFAMILY SSF52540 1 235 4.6E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2847 fa0b6bdffac3279dbc3a4982cacef4c5 240 Gene3D G3DSA:3.40.50.300 1 237 8.3E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1217 b9bec10848bde64ce5c5494301a0b9ba 394 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 193 392 1.3E-59 T 22-04-2016 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 YE1217 b9bec10848bde64ce5c5494301a0b9ba 394 PANTHER PTHR10590 4 394 5.7E-247 T 22-04-2016 IPR008276 Concentrative nucleoside transporter GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 YE1217 b9bec10848bde64ce5c5494301a0b9ba 394 PANTHER PTHR10590:SF13 4 394 5.7E-247 T 22-04-2016 YE1217 b9bec10848bde64ce5c5494301a0b9ba 394 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 7 392 1.8E-133 T 22-04-2016 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 YE1217 b9bec10848bde64ce5c5494301a0b9ba 394 Pfam PF07670 Nucleoside recognition 92 190 2.7E-6 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 YE1217 b9bec10848bde64ce5c5494301a0b9ba 394 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 10 82 8.3E-17 T 22-04-2016 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 YE3228 70d550c562faf9d331ee2ae731df212e 399 TIGRFAM TIGR01767 MTRK: S-methyl-5-thioribose kinase 33 395 3.8E-160 T 22-04-2016 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|KEGG: 00500+2.7.1.10|MetaCyc: PWY-6754|UniPathway: UPA00904 YE3228 70d550c562faf9d331ee2ae731df212e 399 SUPERFAMILY SSF56112 1 397 1.75E-90 T 22-04-2016 IPR011009 Protein kinase-like domain YE3228 70d550c562faf9d331ee2ae731df212e 399 PANTHER PTHR34273 1 397 2.3E-131 T 22-04-2016 YE3228 70d550c562faf9d331ee2ae731df212e 399 PIRSF PIRSF031134 1 399 1.5E-165 T 22-04-2016 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|KEGG: 00500+2.7.1.10|MetaCyc: PWY-6754|UniPathway: UPA00904 YE3228 70d550c562faf9d331ee2ae731df212e 399 Gene3D G3DSA:3.90.1200.10 98 270 9.3E-9 T 22-04-2016 YE3228 70d550c562faf9d331ee2ae731df212e 399 Pfam PF01636 Phosphotransferase enzyme family 33 263 3.8E-14 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase YE3228 70d550c562faf9d331ee2ae731df212e 399 PANTHER PTHR34273:SF2 1 397 2.3E-131 T 22-04-2016 YE3228 70d550c562faf9d331ee2ae731df212e 399 Hamap MF_01683 Methylthioribose kinase [mtnK]. 1 399 213.622 T 22-04-2016 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|KEGG: 00500+2.7.1.10|MetaCyc: PWY-6754|UniPathway: UPA00904 YE0810 a078648cb1a325e6f2289e0e2f38efaa 416 Gene3D G3DSA:3.90.180.10 1 183 1.0E-24 T 22-04-2016 IPR011032 GroES-like YE0810 a078648cb1a325e6f2289e0e2f38efaa 416 Gene3D G3DSA:3.40.50.720 184 307 1.7E-18 T 22-04-2016 IPR016040 NAD(P)-binding domain YE0810 a078648cb1a325e6f2289e0e2f38efaa 416 SUPERFAMILY SSF51735 168 332 1.06E-20 T 22-04-2016 IPR016040 NAD(P)-binding domain YE0810 a078648cb1a325e6f2289e0e2f38efaa 416 PANTHER PTHR11695:SF551 14 375 8.8E-116 T 22-04-2016 YE0810 a078648cb1a325e6f2289e0e2f38efaa 416 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 99 4.9E-6 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 YE0810 a078648cb1a325e6f2289e0e2f38efaa 416 Pfam PF00107 Zinc-binding dehydrogenase 187 327 2.8E-14 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 YE0810 a078648cb1a325e6f2289e0e2f38efaa 416 PANTHER PTHR11695 14 375 8.8E-116 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 YE0810 a078648cb1a325e6f2289e0e2f38efaa 416 SUPERFAMILY SSF50129 3 189 3.46E-27 T 22-04-2016 IPR011032 GroES-like YE1523 93b716fc536034d1abf70f80715ffea6 324 Gene3D G3DSA:3.50.50.60 120 234 1.6E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE1523 93b716fc536034d1abf70f80715ffea6 324 SUPERFAMILY SSF51905 1 318 7.34E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE1523 93b716fc536034d1abf70f80715ffea6 324 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 6.7E-41 T 22-04-2016 YE1523 93b716fc536034d1abf70f80715ffea6 324 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 292 6.7E-41 T 22-04-2016 YE1523 93b716fc536034d1abf70f80715ffea6 324 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 6.7E-41 T 22-04-2016 YE1523 93b716fc536034d1abf70f80715ffea6 324 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 6.7E-41 T 22-04-2016 YE1523 93b716fc536034d1abf70f80715ffea6 324 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 240 256 6.7E-41 T 22-04-2016 YE1523 93b716fc536034d1abf70f80715ffea6 324 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 304 4.6E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE1523 93b716fc536034d1abf70f80715ffea6 324 PANTHER PTHR22912 1 318 1.2E-165 T 22-04-2016 YE1523 93b716fc536034d1abf70f80715ffea6 324 Gene3D G3DSA:3.50.50.60 4 119 2.4E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE1523 93b716fc536034d1abf70f80715ffea6 324 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 22-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 YE1523 93b716fc536034d1abf70f80715ffea6 324 PANTHER PTHR22912:SF48 1 318 1.2E-165 T 22-04-2016 YE1523 93b716fc536034d1abf70f80715ffea6 324 Gene3D G3DSA:3.50.50.60 235 319 2.0E-10 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE1523 93b716fc536034d1abf70f80715ffea6 324 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 5.6E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 YE1523 93b716fc536034d1abf70f80715ffea6 324 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 5.6E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 YE1523 93b716fc536034d1abf70f80715ffea6 324 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 242 263 5.6E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 YE1523 93b716fc536034d1abf70f80715ffea6 324 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 5.6E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 YE1523 93b716fc536034d1abf70f80715ffea6 324 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 5.6E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 YE1523 93b716fc536034d1abf70f80715ffea6 324 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 5.6E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 YE1523 93b716fc536034d1abf70f80715ffea6 324 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 5.6E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 YE1523 93b716fc536034d1abf70f80715ffea6 324 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 280 298 5.6E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 YE1523 93b716fc536034d1abf70f80715ffea6 324 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 5.6E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 YE1523 93b716fc536034d1abf70f80715ffea6 324 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 317 8.0E-124 T 22-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 YE0098 b5d368e1339737c2f60103446973c529 336 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 322 1.5E-131 T 22-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 YE0098 b5d368e1339737c2f60103446973c529 336 PANTHER PTHR30447 1 336 7.3E-184 T 22-04-2016 YE0098 b5d368e1339737c2f60103446973c529 336 PANTHER PTHR30447:SF0 1 336 7.3E-184 T 22-04-2016 YE0098 b5d368e1339737c2f60103446973c529 336 SUPERFAMILY SSF56655 1 325 5.74E-110 T 22-04-2016 YE0098 b5d368e1339737c2f60103446973c529 336 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 330 3.2E-178 T 22-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 YE0098 b5d368e1339737c2f60103446973c529 336 Gene3D G3DSA:3.30.540.10 172 328 8.6E-47 T 22-04-2016 YE0098 b5d368e1339737c2f60103446973c529 336 Gene3D G3DSA:3.30.540.10 1 171 3.7E-68 T 22-04-2016 YE0098 b5d368e1339737c2f60103446973c529 336 PIRSF PIRSF004532 1 332 7.2E-139 T 22-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 YE4064 3136bf07cff2a6780d5d19d4f6acbce4 66 PANTHER PTHR35530 1 66 3.8E-26 T 22-04-2016 YE4064 3136bf07cff2a6780d5d19d4f6acbce4 66 SUPERFAMILY SSF55331 2 64 2.4E-23 T 22-04-2016 IPR014347 Tautomerase/MIF superfamily YE4064 3136bf07cff2a6780d5d19d4f6acbce4 66 Pfam PF01361 Tautomerase enzyme 2 61 5.3E-25 T 22-04-2016 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 YE4064 3136bf07cff2a6780d5d19d4f6acbce4 66 TIGRFAM TIGR00013 taut: 4-oxalocrotonate tautomerase family enzyme 1 64 7.7E-30 T 22-04-2016 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type GO:0006725|GO:0016853 YE4064 3136bf07cff2a6780d5d19d4f6acbce4 66 Gene3D G3DSA:3.30.429.20 2 64 1.2E-29 T 22-04-2016 YE4064 3136bf07cff2a6780d5d19d4f6acbce4 66 PANTHER PTHR35530:SF1 1 66 3.8E-26 T 22-04-2016 YE1776 6bf953825696fd8886cb07adb8c0ad57 265 PANTHER PTHR32502:SF4 1 265 3.8E-177 T 22-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 YE1776 6bf953825696fd8886cb07adb8c0ad57 265 TIGRFAM TIGR00822 EII-Sor: PTS system, mannose/fructose/sorbose family, IIC component 1 265 2.9E-124 T 22-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 YE1776 6bf953825696fd8886cb07adb8c0ad57 265 Pfam PF03609 PTS system sorbose-specific iic component 6 237 1.0E-74 T 22-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 YE1776 6bf953825696fd8886cb07adb8c0ad57 265 PANTHER PTHR32502 1 265 3.8E-177 T 22-04-2016 YE0384 2b147e53d701a1b5769689404a33e6e5 848 SMART SM00955 260 588 8.5E-181 T 22-04-2016 YE0384 2b147e53d701a1b5769689404a33e6e5 848 Pfam PF08206 Ribonuclease B OB domain 87 144 3.1E-22 T 22-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain YE0384 2b147e53d701a1b5769689404a33e6e5 848 Pfam PF08206 Ribonuclease B OB domain 158 213 6.4E-5 T 22-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain YE0384 2b147e53d701a1b5769689404a33e6e5 848 SUPERFAMILY SSF50249 138 236 6.09E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE0384 2b147e53d701a1b5769689404a33e6e5 848 SUPERFAMILY SSF50249 67 145 1.03E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE0384 2b147e53d701a1b5769689404a33e6e5 848 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 67 726 2.7E-272 T 22-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 YE0384 2b147e53d701a1b5769689404a33e6e5 848 Hamap MF_01895 Ribonuclease R [rnr]. 38 726 57.439 T 22-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 YE0384 2b147e53d701a1b5769689404a33e6e5 848 Pfam PF00575 S1 RNA binding domain 642 724 9.8E-17 T 22-04-2016 IPR003029 S1 domain GO:0003676 YE0384 2b147e53d701a1b5769689404a33e6e5 848 SMART SM00316 643 726 3.3E-13 T 22-04-2016 IPR022967 RNA-binding domain, S1 YE0384 2b147e53d701a1b5769689404a33e6e5 848 PANTHER PTHR23355:SF9 1 820 0.0 T 22-04-2016 YE0384 2b147e53d701a1b5769689404a33e6e5 848 SUPERFAMILY SSF50249 222 642 1.77E-140 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE0384 2b147e53d701a1b5769689404a33e6e5 848 SMART SM00357 86 145 4.5E-17 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 YE0384 2b147e53d701a1b5769689404a33e6e5 848 SMART SM00357 150 214 3.2 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 YE0384 2b147e53d701a1b5769689404a33e6e5 848 SUPERFAMILY SSF50249 643 732 4.32E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE0384 2b147e53d701a1b5769689404a33e6e5 848 Pfam PF00773 RNB domain 260 587 1.4E-105 T 22-04-2016 YE0384 2b147e53d701a1b5769689404a33e6e5 848 Pfam PF08461 Ribonuclease R winged-helix domain 23 85 1.1E-16 T 22-04-2016 IPR013668 Ribonuclease R winged-helix domain YE0384 2b147e53d701a1b5769689404a33e6e5 848 Gene3D G3DSA:2.40.50.140 645 735 5.2E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE0384 2b147e53d701a1b5769689404a33e6e5 848 PANTHER PTHR23355 1 820 0.0 T 22-04-2016 YE0384 2b147e53d701a1b5769689404a33e6e5 848 TIGRFAM TIGR02063 RNase_R: ribonuclease R 19 726 3.4E-276 T 22-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 YE2538 c627cc33a315acf44954c183e2cc902d 330 PANTHER PTHR30534 3 330 1.1E-115 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YE2538 c627cc33a315acf44954c183e2cc902d 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 246 266 1.1E-73 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YE2538 c627cc33a315acf44954c183e2cc902d 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 3 19 1.1E-73 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YE2538 c627cc33a315acf44954c183e2cc902d 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 193 218 1.1E-73 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YE2538 c627cc33a315acf44954c183e2cc902d 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 270 296 1.1E-73 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YE2538 c627cc33a315acf44954c183e2cc902d 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 224 244 1.1E-73 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YE2538 c627cc33a315acf44954c183e2cc902d 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 32 58 1.1E-73 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YE2538 c627cc33a315acf44954c183e2cc902d 330 PRINTS PR00954 Flagellar motor switch protein FliG signature 113 136 1.1E-73 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YE2538 c627cc33a315acf44954c183e2cc902d 330 Pfam PF14842 FliG N-terminal domain 3 102 1.9E-31 T 22-04-2016 IPR028263 Flagellar motor switch protein FliG, N-terminal domain YE2538 c627cc33a315acf44954c183e2cc902d 330 SUPERFAMILY SSF48029 4 103 4.71E-21 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical YE2538 c627cc33a315acf44954c183e2cc902d 330 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 2 330 2.8E-139 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YE2538 c627cc33a315acf44954c183e2cc902d 330 SUPERFAMILY SSF48029 113 323 8.76E-64 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical YE2538 c627cc33a315acf44954c183e2cc902d 330 Pfam PF14841 FliG middle domain 114 186 5.6E-25 T 22-04-2016 IPR032779 Flagellar motor switch protein FliG, middle domain YE2538 c627cc33a315acf44954c183e2cc902d 330 Gene3D G3DSA:1.10.220.30 5 70 1.6E-17 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical YE2538 c627cc33a315acf44954c183e2cc902d 330 PANTHER PTHR30534:SF0 3 330 1.1E-115 T 22-04-2016 YE2538 c627cc33a315acf44954c183e2cc902d 330 Gene3D G3DSA:1.10.220.30 193 327 2.0E-41 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical YE2538 c627cc33a315acf44954c183e2cc902d 330 Gene3D G3DSA:1.10.220.30 73 182 1.3E-28 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical YE2538 c627cc33a315acf44954c183e2cc902d 330 Pfam PF01706 FliG C-terminal domain 216 322 2.6E-37 T 22-04-2016 IPR023087 Flagellar motor switch protein FliG, C-terminal YE2538 c627cc33a315acf44954c183e2cc902d 330 PIRSF PIRSF003161 1 330 1.2E-117 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 YE4105 a75b8625f402e628ee7a96ede2b99cef 100 PIRSF PIRSF000699 1 100 2.8E-35 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YE4105 a75b8625f402e628ee7a96ede2b99cef 100 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 6 98 7.5E-34 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YE4105 a75b8625f402e628ee7a96ede2b99cef 100 PANTHER PTHR34382 1 98 5.5E-43 T 22-04-2016 YE4105 a75b8625f402e628ee7a96ede2b99cef 100 PANTHER PTHR34382:SF2 1 98 5.5E-43 T 22-04-2016 YE4105 a75b8625f402e628ee7a96ede2b99cef 100 Gene3D G3DSA:1.20.58.80 1 98 2.0E-39 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YE4105 a75b8625f402e628ee7a96ede2b99cef 100 SUPERFAMILY SSF46973 1 98 1.27E-34 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YE3925 011f241df3ee9c7867112e72bfed0818 157 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 YE3925 011f241df3ee9c7867112e72bfed0818 157 PIRSF PIRSF002560 1 157 2.5E-71 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 YE3925 011f241df3ee9c7867112e72bfed0818 157 PANTHER PTHR30295:SF9 1 156 1.5E-53 T 22-04-2016 YE3925 011f241df3ee9c7867112e72bfed0818 157 TIGRFAM TIGR00754 bfr: bacterioferritin 1 156 1.1E-80 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 YE3925 011f241df3ee9c7867112e72bfed0818 157 SUPERFAMILY SSF47240 1 156 1.56E-53 T 22-04-2016 IPR009078 Ferritin-like superfamily YE3925 011f241df3ee9c7867112e72bfed0818 157 Pfam PF00210 Ferritin-like domain 8 143 2.3E-39 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 YE3925 011f241df3ee9c7867112e72bfed0818 157 PRINTS PR00601 Bacterioferritin signature 23 43 4.6E-76 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 YE3925 011f241df3ee9c7867112e72bfed0818 157 PRINTS PR00601 Bacterioferritin signature 128 149 4.6E-76 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 YE3925 011f241df3ee9c7867112e72bfed0818 157 PRINTS PR00601 Bacterioferritin signature 44 64 4.6E-76 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 YE3925 011f241df3ee9c7867112e72bfed0818 157 PRINTS PR00601 Bacterioferritin signature 3 22 4.6E-76 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 YE3925 011f241df3ee9c7867112e72bfed0818 157 PRINTS PR00601 Bacterioferritin signature 86 106 4.6E-76 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 YE3925 011f241df3ee9c7867112e72bfed0818 157 PRINTS PR00601 Bacterioferritin signature 65 85 4.6E-76 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 YE3925 011f241df3ee9c7867112e72bfed0818 157 PRINTS PR00601 Bacterioferritin signature 107 127 4.6E-76 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 YE3925 011f241df3ee9c7867112e72bfed0818 157 Gene3D G3DSA:1.20.1260.10 1 156 1.3E-64 T 22-04-2016 IPR012347 Ferritin-related YE3925 011f241df3ee9c7867112e72bfed0818 157 PANTHER PTHR30295 1 156 1.5E-53 T 22-04-2016 YE2468 c5ecce30b422365e867b30b1a189d144 345 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 4 338 8.6E-155 T 22-04-2016 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 YE2468 c5ecce30b422365e867b30b1a189d144 345 Gene3D G3DSA:3.40.630.30 113 135 7.6E-6 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE2468 c5ecce30b422365e867b30b1a189d144 345 Gene3D G3DSA:3.40.630.30 1 78 7.6E-6 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE2468 c5ecce30b422365e867b30b1a189d144 345 PANTHER PTHR30420 1 345 2.0E-206 T 22-04-2016 YE2468 c5ecce30b422365e867b30b1a189d144 345 SUPERFAMILY SSF55729 1 338 2.28E-130 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE2468 c5ecce30b422365e867b30b1a189d144 345 Hamap MF_01171 Arginine N-succinyltransferase [astA]. 1 345 67.34 T 22-04-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 YE2468 c5ecce30b422365e867b30b1a189d144 345 PANTHER PTHR30420:SF1 1 345 2.0E-206 T 22-04-2016 YE2468 c5ecce30b422365e867b30b1a189d144 345 Gene3D G3DSA:2.40.40.20 279 338 1.5E-15 T 22-04-2016 YE2468 c5ecce30b422365e867b30b1a189d144 345 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 4 338 7.5E-145 T 22-04-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 YE2468 c5ecce30b422365e867b30b1a189d144 345 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 336 2.6E-141 T 22-04-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 YE0719 321cfc5eee34c9dbe0ed5e91ef5b44a0 284 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 280 1.9E-114 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 YE0719 321cfc5eee34c9dbe0ed5e91ef5b44a0 284 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 40.082 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 YE0719 321cfc5eee34c9dbe0ed5e91ef5b44a0 284 PANTHER PTHR21299 1 282 2.9E-137 T 22-04-2016 YE0719 321cfc5eee34c9dbe0ed5e91ef5b44a0 284 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 7.1E-103 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 YE0719 321cfc5eee34c9dbe0ed5e91ef5b44a0 284 Gene3D G3DSA:3.40.50.620 1 176 4.8E-77 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YE0719 321cfc5eee34c9dbe0ed5e91ef5b44a0 284 SUPERFAMILY SSF52374 1 281 7.95E-106 T 22-04-2016 YE0719 321cfc5eee34c9dbe0ed5e91ef5b44a0 284 PANTHER PTHR21299:SF1 1 282 2.9E-137 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 YE0719 321cfc5eee34c9dbe0ed5e91ef5b44a0 284 Gene3D G3DSA:3.30.1300.10 181 282 1.2E-29 T 22-04-2016 YE2068 8cd4ac83994678ff574db2d3806e3959 469 ProSitePatterns PS00123 Alkaline phosphatase active site. 119 127 - T 22-04-2016 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 YE2068 8cd4ac83994678ff574db2d3806e3959 469 PRINTS PR00113 Alkaline phosphatase signature 62 82 8.4E-48 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 YE2068 8cd4ac83994678ff574db2d3806e3959 469 PRINTS PR00113 Alkaline phosphatase signature 156 176 8.4E-48 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 YE2068 8cd4ac83994678ff574db2d3806e3959 469 PRINTS PR00113 Alkaline phosphatase signature 318 347 8.4E-48 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 YE2068 8cd4ac83994678ff574db2d3806e3959 469 PRINTS PR00113 Alkaline phosphatase signature 219 229 8.4E-48 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 YE2068 8cd4ac83994678ff574db2d3806e3959 469 PRINTS PR00113 Alkaline phosphatase signature 119 134 8.4E-48 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 YE2068 8cd4ac83994678ff574db2d3806e3959 469 SUPERFAMILY SSF53649 37 468 1.96E-131 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 YE2068 8cd4ac83994678ff574db2d3806e3959 469 PANTHER PTHR11596:SF5 315 468 1.7E-144 T 22-04-2016 YE2068 8cd4ac83994678ff574db2d3806e3959 469 PANTHER PTHR11596:SF5 43 292 1.7E-144 T 22-04-2016 YE2068 8cd4ac83994678ff574db2d3806e3959 469 Pfam PF00245 Alkaline phosphatase 63 428 2.0E-117 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 YE2068 8cd4ac83994678ff574db2d3806e3959 469 SMART SM00098 63 469 1.5E-182 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 YE2068 8cd4ac83994678ff574db2d3806e3959 469 PANTHER PTHR11596 315 468 1.7E-144 T 22-04-2016 YE2068 8cd4ac83994678ff574db2d3806e3959 469 PANTHER PTHR11596 43 292 1.7E-144 T 22-04-2016 YE2068 8cd4ac83994678ff574db2d3806e3959 469 Gene3D G3DSA:3.40.720.10 45 468 2.8E-134 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 YE0952 04f4795073d4f908b147026a061be6ff 164 PANTHER PTHR33569 25 163 1.7E-74 T 22-04-2016 YE0952 04f4795073d4f908b147026a061be6ff 164 PANTHER PTHR33569:SF1 25 163 1.7E-74 T 22-04-2016 YE0952 04f4795073d4f908b147026a061be6ff 164 SUPERFAMILY SSF51278 38 139 1.7E-42 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YE0952 04f4795073d4f908b147026a061be6ff 164 Hamap MF_01954 Urease subunit beta [ureB]. 35 135 29.237 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YE0952 04f4795073d4f908b147026a061be6ff 164 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 38 133 5.8E-40 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YE0952 04f4795073d4f908b147026a061be6ff 164 Gene3D G3DSA:2.10.150.10 38 163 3.4E-48 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YE0952 04f4795073d4f908b147026a061be6ff 164 Pfam PF00699 Urease beta subunit 39 133 2.2E-40 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YE1062 133436b9674ee09e7af4e43c50465fb1 111 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 15 92 7.1E-16 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YE1062 133436b9674ee09e7af4e43c50465fb1 111 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 22-04-2016 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 YE1062 133436b9674ee09e7af4e43c50465fb1 111 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 111 4.7E-62 T 22-04-2016 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 YE1062 133436b9674ee09e7af4e43c50465fb1 111 PRINTS PR00355 Adrenodoxin signature 83 91 5.4E-10 T 22-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 YE1062 133436b9674ee09e7af4e43c50465fb1 111 PRINTS PR00355 Adrenodoxin signature 42 52 5.4E-10 T 22-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 YE1062 133436b9674ee09e7af4e43c50465fb1 111 PRINTS PR00355 Adrenodoxin signature 60 74 5.4E-10 T 22-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 YE1062 133436b9674ee09e7af4e43c50465fb1 111 Gene3D G3DSA:3.10.20.30 5 108 3.7E-36 T 22-04-2016 IPR012675 Beta-grasp domain YE1062 133436b9674ee09e7af4e43c50465fb1 111 PANTHER PTHR23426 7 110 3.2E-43 T 22-04-2016 YE1062 133436b9674ee09e7af4e43c50465fb1 111 SUPERFAMILY SSF54292 4 109 1.4E-35 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YE2434 3c1e186d763f179eac5b9d906422c525 279 SUPERFAMILY SSF54211 1 148 3.57E-43 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YE2434 3c1e186d763f179eac5b9d906422c525 279 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 1 267 5.6E-103 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 YE2434 3c1e186d763f179eac5b9d906422c525 279 PIRSF PIRSF010376 1 270 7.9E-80 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 YE2434 3c1e186d763f179eac5b9d906422c525 279 Pfam PF00288 GHMP kinases N terminal domain 78 135 2.5E-11 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 YE2434 3c1e186d763f179eac5b9d906422c525 279 Gene3D G3DSA:3.30.230.10 1 150 1.6E-49 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YE2434 3c1e186d763f179eac5b9d906422c525 279 SUPERFAMILY SSF55060 154 268 3.6E-36 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain YE2434 3c1e186d763f179eac5b9d906422c525 279 PANTHER PTHR20861 1 268 7.0E-99 T 22-04-2016 YE2434 3c1e186d763f179eac5b9d906422c525 279 PANTHER PTHR20861:SF2 1 268 7.0E-99 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 YE2434 3c1e186d763f179eac5b9d906422c525 279 Gene3D G3DSA:3.30.70.890 154 268 8.0E-43 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain YE2434 3c1e186d763f179eac5b9d906422c525 279 Pfam PF08544 GHMP kinases C terminal 193 247 6.4E-6 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain YE2434 3c1e186d763f179eac5b9d906422c525 279 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 1 262 29.151 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 YE4033 eadb676b93f82a5af480fd2d98329a6f 317 Gene3D G3DSA:1.10.10.10 12 93 8.1E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE4033 eadb676b93f82a5af480fd2d98329a6f 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 71 2.1E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE4033 eadb676b93f82a5af480fd2d98329a6f 317 Gene3D G3DSA:3.40.190.10 100 183 2.1E-20 T 22-04-2016 YE4033 eadb676b93f82a5af480fd2d98329a6f 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 38 8.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE4033 eadb676b93f82a5af480fd2d98329a6f 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 48 59 8.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE4033 eadb676b93f82a5af480fd2d98329a6f 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 48 8.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE4033 eadb676b93f82a5af480fd2d98329a6f 317 PANTHER PTHR30537 5 303 7.4E-90 T 22-04-2016 YE4033 eadb676b93f82a5af480fd2d98329a6f 317 PANTHER PTHR30537:SF5 5 303 7.4E-90 T 22-04-2016 YE4033 eadb676b93f82a5af480fd2d98329a6f 317 SUPERFAMILY SSF46785 12 119 1.1E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE4033 eadb676b93f82a5af480fd2d98329a6f 317 Gene3D G3DSA:3.40.190.10 184 269 3.5E-19 T 22-04-2016 YE4033 eadb676b93f82a5af480fd2d98329a6f 317 Pfam PF03466 LysR substrate binding domain 96 301 6.7E-39 T 22-04-2016 IPR005119 LysR, substrate-binding YE4033 eadb676b93f82a5af480fd2d98329a6f 317 SUPERFAMILY SSF53850 95 304 2.71E-42 T 22-04-2016 YE0012A aec41adeb7be878ed3f688cc3033f553 333 PANTHER PTHR30146:SF38 1 330 2.2E-209 T 22-04-2016 YE0012A aec41adeb7be878ed3f688cc3033f553 333 SMART SM00354 1 71 3.6E-35 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE0012A aec41adeb7be878ed3f688cc3033f553 333 Gene3D G3DSA:1.10.260.40 2 53 2.0E-25 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE0012A aec41adeb7be878ed3f688cc3033f553 333 SUPERFAMILY SSF53822 60 331 3.03E-90 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YE0012A aec41adeb7be878ed3f688cc3033f553 333 PANTHER PTHR30146 1 330 2.2E-209 T 22-04-2016 YE0012A aec41adeb7be878ed3f688cc3033f553 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.3E-6 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE0012A aec41adeb7be878ed3f688cc3033f553 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.3E-6 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE0012A aec41adeb7be878ed3f688cc3033f553 333 Gene3D G3DSA:3.40.50.2300 54 175 1.8E-41 T 22-04-2016 YE0012A aec41adeb7be878ed3f688cc3033f553 333 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.1E-20 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE0012A aec41adeb7be878ed3f688cc3033f553 333 SUPERFAMILY SSF47413 2 59 2.22E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE0012A aec41adeb7be878ed3f688cc3033f553 333 Pfam PF13377 Periplasmic binding protein-like domain 170 330 1.7E-46 T 22-04-2016 YE0012A aec41adeb7be878ed3f688cc3033f553 333 Gene3D G3DSA:3.40.50.2300 176 311 5.3E-54 T 22-04-2016 YE0012A aec41adeb7be878ed3f688cc3033f553 333 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE2898 7732ebcc25cda8a0fe3364f30ae50f87 159 Pfam PF01967 MoaC family 15 150 1.8E-54 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 YE2898 7732ebcc25cda8a0fe3364f30ae50f87 159 PANTHER PTHR22960 1 158 9.7E-111 T 22-04-2016 YE2898 7732ebcc25cda8a0fe3364f30ae50f87 159 Gene3D G3DSA:3.30.70.640 3 157 6.8E-70 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 YE2898 7732ebcc25cda8a0fe3364f30ae50f87 159 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 2 158 36.072 T 22-04-2016 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type UniPathway: UPA00344 YE2898 7732ebcc25cda8a0fe3364f30ae50f87 159 SUPERFAMILY SSF55040 11 155 4.45E-61 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 YE2898 7732ebcc25cda8a0fe3364f30ae50f87 159 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 1.5E-71 T 22-04-2016 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 UniPathway: UPA00344 YE3758 886d86f55aa56218bba10f65a081d4bc 241 SUPERFAMILY SSF52540 4 236 2.37E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3758 886d86f55aa56218bba10f65a081d4bc 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE3758 886d86f55aa56218bba10f65a081d4bc 241 PANTHER PTHR24220 5 238 1.4E-149 T 22-04-2016 YE3758 886d86f55aa56218bba10f65a081d4bc 241 Gene3D G3DSA:3.40.50.300 5 235 4.2E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3758 886d86f55aa56218bba10f65a081d4bc 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 3 241 8.6E-122 T 22-04-2016 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 YE3758 886d86f55aa56218bba10f65a081d4bc 241 SMART SM00382 28 231 3.4E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain YE3758 886d86f55aa56218bba10f65a081d4bc 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 215 236 4.6E-9 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal YE3758 886d86f55aa56218bba10f65a081d4bc 241 PANTHER PTHR24220:SF497 5 238 1.4E-149 T 22-04-2016 YE3758 886d86f55aa56218bba10f65a081d4bc 241 Pfam PF00005 ABC transporter 20 166 5.0E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE1587 4b7a8e0085dd0420fb30b27373565ab3 152 ProSitePatterns PS01335 Methylglyoxal synthase active site. 65 72 - T 22-04-2016 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 YE1587 4b7a8e0085dd0420fb30b27373565ab3 152 Pfam PF02142 MGS-like domain 26 118 1.1E-18 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain YE1587 4b7a8e0085dd0420fb30b27373565ab3 152 PIRSF PIRSF006614 8 151 3.7E-65 T 22-04-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 YE1587 4b7a8e0085dd0420fb30b27373565ab3 152 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 11 151 8.1E-66 T 22-04-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 YE1587 4b7a8e0085dd0420fb30b27373565ab3 152 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 12 131 39.009 T 22-04-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 YE1587 4b7a8e0085dd0420fb30b27373565ab3 152 PANTHER PTHR30492 2 151 1.6E-89 T 22-04-2016 YE1587 4b7a8e0085dd0420fb30b27373565ab3 152 SUPERFAMILY SSF52335 6 151 4.01E-57 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain YE1587 4b7a8e0085dd0420fb30b27373565ab3 152 SMART SM00851 25 118 8.4E-27 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain YE1587 4b7a8e0085dd0420fb30b27373565ab3 152 Gene3D G3DSA:3.40.50.1380 2 151 8.2E-65 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain YE0121 1a868bd97b0477591f7a61f28a24b40c 457 Gene3D G3DSA:1.10.275.10 1 107 1.5E-37 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal YE0121 1a868bd97b0477591f7a61f28a24b40c 457 PANTHER PTHR11444 3 456 3.1E-241 T 22-04-2016 IPR000362 Fumarate lyase family YE0121 1a868bd97b0477591f7a61f28a24b40c 457 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 41.111 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YE0121 1a868bd97b0477591f7a61f28a24b40c 457 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 6.1E-68 T 22-04-2016 YE0121 1a868bd97b0477591f7a61f28a24b40c 457 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 6.1E-68 T 22-04-2016 YE0121 1a868bd97b0477591f7a61f28a24b40c 457 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 6.1E-68 T 22-04-2016 YE0121 1a868bd97b0477591f7a61f28a24b40c 457 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 6.1E-68 T 22-04-2016 YE0121 1a868bd97b0477591f7a61f28a24b40c 457 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 6.1E-68 T 22-04-2016 YE0121 1a868bd97b0477591f7a61f28a24b40c 457 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 6.1E-68 T 22-04-2016 YE0121 1a868bd97b0477591f7a61f28a24b40c 457 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 6.8E-23 T 22-04-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YE0121 1a868bd97b0477591f7a61f28a24b40c 457 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 YE0121 1a868bd97b0477591f7a61f28a24b40c 457 Gene3D G3DSA:1.10.40.30 375 432 1.5E-29 T 22-04-2016 YE0121 1a868bd97b0477591f7a61f28a24b40c 457 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 2.7E-28 T 22-04-2016 IPR000362 Fumarate lyase family YE0121 1a868bd97b0477591f7a61f28a24b40c 457 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 2.7E-28 T 22-04-2016 IPR000362 Fumarate lyase family YE0121 1a868bd97b0477591f7a61f28a24b40c 457 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 2.7E-28 T 22-04-2016 IPR000362 Fumarate lyase family YE0121 1a868bd97b0477591f7a61f28a24b40c 457 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 2.7E-28 T 22-04-2016 IPR000362 Fumarate lyase family YE0121 1a868bd97b0477591f7a61f28a24b40c 457 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 456 3.9E-210 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YE0121 1a868bd97b0477591f7a61f28a24b40c 457 Pfam PF00206 Lyase 6 301 7.2E-96 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal YE0121 1a868bd97b0477591f7a61f28a24b40c 457 Gene3D G3DSA:1.20.200.10 108 374 2.0E-103 T 22-04-2016 YE0121 1a868bd97b0477591f7a61f28a24b40c 457 PANTHER PTHR11444:SF3 3 456 3.1E-241 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YE0121 1a868bd97b0477591f7a61f28a24b40c 457 SUPERFAMILY SSF48557 3 456 1.34E-140 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 YE3447 e43a8bba797e14b53757dff5aa154547 720 Gene3D G3DSA:3.40.640.10 109 419 1.3E-114 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YE3447 e43a8bba797e14b53757dff5aa154547 720 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 4 103 1.9E-20 T 22-04-2016 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 YE3447 e43a8bba797e14b53757dff5aa154547 720 Gene3D G3DSA:3.90.1150.10 421 592 4.8E-70 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YE3447 e43a8bba797e14b53757dff5aa154547 720 SUPERFAMILY SSF55904 572 719 8.11E-46 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 YE3447 e43a8bba797e14b53757dff5aa154547 720 PIRSF PIRSF009393 1 720 1.0E-290 T 22-04-2016 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 YE3447 e43a8bba797e14b53757dff5aa154547 720 SUPERFAMILY SSF52172 1 108 1.59E-30 T 22-04-2016 IPR011006 CheY-like superfamily YE3447 e43a8bba797e14b53757dff5aa154547 720 Gene3D G3DSA:3.40.50.220 1 108 1.1E-33 T 22-04-2016 IPR027464 Ornithine decarboxylase, N-terminal domain KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 YE3447 e43a8bba797e14b53757dff5aa154547 720 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 350 364 - T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 YE3447 e43a8bba797e14b53757dff5aa154547 720 TIGRFAM TIGR04301 ODC_inducible: ornithine decarboxylase SpeF 1 718 0.0 T 22-04-2016 IPR027568 Ornithine decarboxylase SpeF GO:0004586 KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 YE3447 e43a8bba797e14b53757dff5aa154547 720 PANTHER PTHR11751:SF425 110 580 1.8E-219 T 22-04-2016 YE3447 e43a8bba797e14b53757dff5aa154547 720 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 576 705 1.5E-48 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 YE3447 e43a8bba797e14b53757dff5aa154547 720 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 109 550 1.7E-195 T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 YE3447 e43a8bba797e14b53757dff5aa154547 720 Gene3D G3DSA:3.90.100.10 593 719 1.1E-36 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 YE3447 e43a8bba797e14b53757dff5aa154547 720 PANTHER PTHR11751 110 580 1.8E-219 T 22-04-2016 YE3447 e43a8bba797e14b53757dff5aa154547 720 SUPERFAMILY SSF53383 109 567 4.32E-118 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YE3426 e6f3669911f2022e2d3352f152b4f000 243 PANTHER PTHR30027 1 243 2.7E-101 T 22-04-2016 YE3426 e6f3669911f2022e2d3352f152b4f000 243 SUPERFAMILY SSF88697 2 69 2.01E-17 T 22-04-2016 IPR015947 PUA-like domain YE3426 e6f3669911f2022e2d3352f152b4f000 243 SUPERFAMILY SSF75217 75 242 2.93E-51 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases YE3426 e6f3669911f2022e2d3352f152b4f000 243 Gene3D G3DSA:3.40.1280.10 75 242 7.8E-58 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YE3426 e6f3669911f2022e2d3352f152b4f000 243 Gene3D G3DSA:2.40.240.20 1 70 4.9E-27 T 22-04-2016 YE3426 e6f3669911f2022e2d3352f152b4f000 243 PIRSF PIRSF015601 2 242 2.7E-54 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YE3426 e6f3669911f2022e2d3352f152b4f000 243 PANTHER PTHR30027:SF3 1 243 2.7E-101 T 22-04-2016 YE3426 e6f3669911f2022e2d3352f152b4f000 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 2 242 2.0E-86 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YE3426 e6f3669911f2022e2d3352f152b4f000 243 Pfam PF04452 RNA methyltransferase 19 236 1.0E-73 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YE3428 a1dc89f5d8505b1ab8d1041aea668e51 187 PANTHER PTHR30327:SF1 1 187 1.2E-71 T 22-04-2016 YE3428 a1dc89f5d8505b1ab8d1041aea668e51 187 Gene3D G3DSA:3.30.70.1300 41 130 4.3E-26 T 22-04-2016 YE3428 a1dc89f5d8505b1ab8d1041aea668e51 187 Gene3D G3DSA:3.40.1740.10 2 40 1.2E-36 T 22-04-2016 YE3428 a1dc89f5d8505b1ab8d1041aea668e51 187 Gene3D G3DSA:3.40.1740.10 131 177 1.2E-36 T 22-04-2016 YE3428 a1dc89f5d8505b1ab8d1041aea668e51 187 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 1 187 39.142 T 22-04-2016 IPR003774 Protein of unknown function UPF0301 YE3428 a1dc89f5d8505b1ab8d1041aea668e51 187 Pfam PF02622 Uncharacterized ACR, COG1678 12 174 7.6E-50 T 22-04-2016 IPR003774 Protein of unknown function UPF0301 YE3428 a1dc89f5d8505b1ab8d1041aea668e51 187 SUPERFAMILY SSF143456 1 187 4.84E-66 T 22-04-2016 YE3428 a1dc89f5d8505b1ab8d1041aea668e51 187 PANTHER PTHR30327 1 187 1.2E-71 T 22-04-2016 YE3963 a170748d72631c9d646a3fe4e21e8448 394 PANTHER PTHR23514 1 389 7.3E-105 T 22-04-2016 YE3963 a170748d72631c9d646a3fe4e21e8448 394 Gene3D G3DSA:1.20.1250.20 6 181 3.6E-15 T 22-04-2016 YE3963 a170748d72631c9d646a3fe4e21e8448 394 Pfam PF07690 Major Facilitator Superfamily 15 320 8.4E-22 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YE3963 a170748d72631c9d646a3fe4e21e8448 394 Gene3D G3DSA:1.20.1250.20 207 380 9.7E-13 T 22-04-2016 YE3963 a170748d72631c9d646a3fe4e21e8448 394 Hamap MF_01044 Protein TsgA [tsgA]. 1 390 28.748 T 22-04-2016 IPR023528 Major facilitator superfamily transporter, TsgA YE3963 a170748d72631c9d646a3fe4e21e8448 394 SUPERFAMILY SSF103473 4 389 1.57E-38 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE3963 a170748d72631c9d646a3fe4e21e8448 394 PANTHER PTHR23514:SF3 1 389 7.3E-105 T 22-04-2016 YE1109 0224936d58e3db5fd0f479d505a5c0d8 443 PANTHER PTHR30469:SF12 2 407 3.0E-194 T 22-04-2016 IPR022824 Multidrug resistance protein MdtA YE1109 0224936d58e3db5fd0f479d505a5c0d8 443 SUPERFAMILY SSF111369 81 320 1.02E-56 T 22-04-2016 YE1109 0224936d58e3db5fd0f479d505a5c0d8 443 PANTHER PTHR30469 2 407 3.0E-194 T 22-04-2016 YE1109 0224936d58e3db5fd0f479d505a5c0d8 443 Gene3D G3DSA:2.40.50.100 88 122 1.8E-23 T 22-04-2016 YE1109 0224936d58e3db5fd0f479d505a5c0d8 443 Gene3D G3DSA:2.40.50.100 197 232 1.8E-23 T 22-04-2016 YE1109 0224936d58e3db5fd0f479d505a5c0d8 443 Pfam PF13437 HlyD family secretion protein 200 305 3.7E-7 T 22-04-2016 YE1109 0224936d58e3db5fd0f479d505a5c0d8 443 Pfam PF13533 Biotin-lipoyl like 89 137 7.0E-16 T 22-04-2016 YE1109 0224936d58e3db5fd0f479d505a5c0d8 443 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 64 396 7.9E-77 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 YE1109 0224936d58e3db5fd0f479d505a5c0d8 443 Hamap MF_01422 Multidrug resistance protein MdtA [mdtA]. 4 420 54.387 T 22-04-2016 IPR022824 Multidrug resistance protein MdtA YE0251 2ccfa9561a61909dc10186ce9021d761 253 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 6 253 5.9E-128 T 22-04-2016 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|UniPathway: UPA00574 YE0251 2ccfa9561a61909dc10186ce9021d761 253 Gene3D G3DSA:3.40.50.1580 5 252 8.9E-83 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 YE0251 2ccfa9561a61909dc10186ce9021d761 253 PANTHER PTHR21234 1 253 4.3E-198 T 22-04-2016 IPR018017 Nucleoside phosphorylase YE0251 2ccfa9561a61909dc10186ce9021d761 253 SUPERFAMILY SSF53167 6 250 7.86E-74 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 YE0251 2ccfa9561a61909dc10186ce9021d761 253 PANTHER PTHR21234:SF22 1 253 4.3E-198 T 22-04-2016 YE0251 2ccfa9561a61909dc10186ce9021d761 253 Pfam PF01048 Phosphorylase superfamily 21 237 4.1E-39 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 YE0251 2ccfa9561a61909dc10186ce9021d761 253 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 66 81 - T 22-04-2016 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 YE3335 a92e9644f2ca7f4fb57babd588c878cf 298 Pfam PF03466 LysR substrate binding domain 88 291 7.7E-40 T 22-04-2016 IPR005119 LysR, substrate-binding YE3335 a92e9644f2ca7f4fb57babd588c878cf 298 Gene3D G3DSA:3.40.190.10 89 174 4.9E-7 T 22-04-2016 YE3335 a92e9644f2ca7f4fb57babd588c878cf 298 Gene3D G3DSA:3.40.190.10 175 259 3.5E-22 T 22-04-2016 YE3335 a92e9644f2ca7f4fb57babd588c878cf 298 Gene3D G3DSA:1.10.10.10 4 79 8.9E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3335 a92e9644f2ca7f4fb57babd588c878cf 298 PANTHER PTHR30537 1 296 2.0E-188 T 22-04-2016 YE3335 a92e9644f2ca7f4fb57babd588c878cf 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.7E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE3335 a92e9644f2ca7f4fb57babd588c878cf 298 SUPERFAMILY SSF53850 89 295 2.53E-43 T 22-04-2016 YE3335 a92e9644f2ca7f4fb57babd588c878cf 298 SUPERFAMILY SSF46785 7 79 1.45E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3335 a92e9644f2ca7f4fb57babd588c878cf 298 PANTHER PTHR30537:SF13 1 296 2.0E-188 T 22-04-2016 YE0773 fdb6989943ab71d0919515356af704d9 208 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 1 207 4.2E-90 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 YE0773 fdb6989943ab71d0919515356af704d9 208 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 1 208 38.909 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 YE0773 fdb6989943ab71d0919515356af704d9 208 PANTHER PTHR11579 9 203 1.0E-92 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 YE0773 fdb6989943ab71d0919515356af704d9 208 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 130 145 - T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 YE0773 fdb6989943ab71d0919515356af704d9 208 SUPERFAMILY SSF53335 4 204 2.61E-47 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE0773 fdb6989943ab71d0919515356af704d9 208 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 6 206 5.6E-77 T 22-04-2016 YE0773 fdb6989943ab71d0919515356af704d9 208 Gene3D G3DSA:3.40.50.150 12 205 9.4E-66 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE2939 5e143f94ffd577cbfdc239c5e0640ac7 522 PANTHER PTHR30365 1 310 1.1E-270 T 22-04-2016 YE2939 5e143f94ffd577cbfdc239c5e0640ac7 522 PANTHER PTHR30365 376 520 1.1E-270 T 22-04-2016 YE2939 5e143f94ffd577cbfdc239c5e0640ac7 522 PIRSF PIRSF006446 1 521 1.9E-139 T 22-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 YE2939 5e143f94ffd577cbfdc239c5e0640ac7 522 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 501 1.5E-171 T 22-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 YE2939 5e143f94ffd577cbfdc239c5e0640ac7 522 PANTHER PTHR30365:SF0 1 310 1.1E-270 T 22-04-2016 YE2939 5e143f94ffd577cbfdc239c5e0640ac7 522 PANTHER PTHR30365:SF0 376 520 1.1E-270 T 22-04-2016 YE2566 4b77943ddb6da1b671763e6dc3f2b54a 692 Pfam PF00771 FHIPEP family 31 681 2.7E-268 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YE2566 4b77943ddb6da1b671763e6dc3f2b54a 692 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 147 170 - T 22-04-2016 IPR025505 FHIPEP conserved site YE2566 4b77943ddb6da1b671763e6dc3f2b54a 692 PANTHER PTHR30161 2 692 0.0 T 22-04-2016 YE2566 4b77943ddb6da1b671763e6dc3f2b54a 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 191 208 1.5E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YE2566 4b77943ddb6da1b671763e6dc3f2b54a 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 242 256 1.5E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YE2566 4b77943ddb6da1b671763e6dc3f2b54a 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 161 179 1.5E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YE2566 4b77943ddb6da1b671763e6dc3f2b54a 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 51 1.5E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YE2566 4b77943ddb6da1b671763e6dc3f2b54a 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 75 94 1.5E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YE2566 4b77943ddb6da1b671763e6dc3f2b54a 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 142 158 1.5E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YE2566 4b77943ddb6da1b671763e6dc3f2b54a 692 PANTHER PTHR30161:SF1 2 692 0.0 T 22-04-2016 YE2566 4b77943ddb6da1b671763e6dc3f2b54a 692 PIRSF PIRSF005419 15 692 2.9E-241 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 YE2566 4b77943ddb6da1b671763e6dc3f2b54a 692 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 22 689 1.3E-280 T 22-04-2016 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 YE0690 1fa9f1fe118e6b453169948e24b6b224 144 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site YE0690 1fa9f1fe118e6b453169948e24b6b224 144 SUPERFAMILY SSF54523 28 138 1.36E-23 T 22-04-2016 YE0690 1fa9f1fe118e6b453169948e24b6b224 144 PANTHER PTHR30093 1 76 4.8E-24 T 22-04-2016 YE0690 1fa9f1fe118e6b453169948e24b6b224 144 PANTHER PTHR30093 109 120 4.8E-24 T 22-04-2016 YE0690 1fa9f1fe118e6b453169948e24b6b224 144 Pfam PF00114 Pilin (bacterial filament) 36 134 1.6E-4 T 22-04-2016 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 YE0690 1fa9f1fe118e6b453169948e24b6b224 144 Gene3D G3DSA:3.30.700.10 7 137 7.4E-32 T 22-04-2016 YE0690 1fa9f1fe118e6b453169948e24b6b224 144 Pfam PF13633 Prokaryotic N-terminal methylation site 4 30 2.2E-12 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site YE0690 1fa9f1fe118e6b453169948e24b6b224 144 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 3.7E-10 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site YE3601 c322895e29652e34aa45be363dc7298f 322 Pfam PF02769 AIR synthase related protein, C-terminal domain 151 298 8.3E-28 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain YE3601 c322895e29652e34aa45be363dc7298f 322 SUPERFAMILY SSF56042 149 317 3.14E-43 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain YE3601 c322895e29652e34aa45be363dc7298f 322 Gene3D G3DSA:3.30.1330.10 2 142 5.4E-24 T 22-04-2016 IPR016188 PurM-like, N-terminal domain YE3601 c322895e29652e34aa45be363dc7298f 322 PANTHER PTHR30303:SF0 1 322 1.7E-147 T 22-04-2016 YE3601 c322895e29652e34aa45be363dc7298f 322 Gene3D G3DSA:3.90.650.10 150 302 2.5E-28 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain YE3601 c322895e29652e34aa45be363dc7298f 322 TIGRFAM TIGR02124 hypE: hydrogenase expression/formation protein HypE 1 322 1.6E-131 T 22-04-2016 IPR011854 Hydrogenase expression/formation protein HypE YE3601 c322895e29652e34aa45be363dc7298f 322 PANTHER PTHR30303 1 322 1.7E-147 T 22-04-2016 YE3601 c322895e29652e34aa45be363dc7298f 322 Pfam PF00586 AIR synthase related protein, N-terminal domain 39 139 4.6E-17 T 22-04-2016 IPR016188 PurM-like, N-terminal domain YE3601 c322895e29652e34aa45be363dc7298f 322 PIRSF PIRSF005644 1 322 4.9E-120 T 22-04-2016 IPR011854 Hydrogenase expression/formation protein HypE YE3601 c322895e29652e34aa45be363dc7298f 322 SUPERFAMILY SSF55326 2 142 2.27E-30 T 22-04-2016 YE2619 3d00467361b5be68fc25142eab94d454 366 Gene3D G3DSA:3.40.50.720 4 126 3.0E-9 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2619 3d00467361b5be68fc25142eab94d454 366 PIRSF PIRSF017494 4 363 1.8E-152 T 22-04-2016 IPR010091 Thiazolinyl imide reductase YE2619 3d00467361b5be68fc25142eab94d454 366 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 10 126 1.0E-22 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 YE2619 3d00467361b5be68fc25142eab94d454 366 TIGRFAM TIGR01761 thiaz-red: thiazolinyl imide reductase 6 348 8.7E-160 T 22-04-2016 IPR010091 Thiazolinyl imide reductase YE2619 3d00467361b5be68fc25142eab94d454 366 SUPERFAMILY SSF51735 8 140 1.46E-13 T 22-04-2016 IPR016040 NAD(P)-binding domain YE0478 139e2a554166ff7bcd2fe6cd5377e5b1 241 TIGRFAM TIGR02325 C_P_lyase_phnF: phosphonate metabolism transcriptional regulator PhnF 7 241 8.7E-86 T 22-04-2016 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF YE0478 139e2a554166ff7bcd2fe6cd5377e5b1 241 Pfam PF07702 UTRA domain 96 235 3.9E-30 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 YE0478 139e2a554166ff7bcd2fe6cd5377e5b1 241 SUPERFAMILY SSF46785 8 84 3.85E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0478 139e2a554166ff7bcd2fe6cd5377e5b1 241 PANTHER PTHR11751 9 78 1.7E-45 T 22-04-2016 YE0478 139e2a554166ff7bcd2fe6cd5377e5b1 241 PANTHER PTHR11751 125 148 1.7E-45 T 22-04-2016 YE0478 139e2a554166ff7bcd2fe6cd5377e5b1 241 SUPERFAMILY SSF64288 63 240 3.45E-37 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain YE0478 139e2a554166ff7bcd2fe6cd5377e5b1 241 Gene3D G3DSA:1.10.10.10 9 82 1.8E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0478 139e2a554166ff7bcd2fe6cd5377e5b1 241 SMART SM00345 17 75 1.5E-19 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YE0478 139e2a554166ff7bcd2fe6cd5377e5b1 241 Gene3D G3DSA:3.40.1410.10 83 241 1.5E-43 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain YE0478 139e2a554166ff7bcd2fe6cd5377e5b1 241 PANTHER PTHR11751:SF292 9 78 1.7E-45 T 22-04-2016 YE0478 139e2a554166ff7bcd2fe6cd5377e5b1 241 PANTHER PTHR11751:SF292 125 148 1.7E-45 T 22-04-2016 YE0478 139e2a554166ff7bcd2fe6cd5377e5b1 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 1.5E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YE0478 139e2a554166ff7bcd2fe6cd5377e5b1 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 1.5E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YE0478 139e2a554166ff7bcd2fe6cd5377e5b1 241 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 75 3.4E-19 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YE0478 139e2a554166ff7bcd2fe6cd5377e5b1 241 SMART SM00866 96 236 2.4E-27 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 YE0510A 739ed16745fb92772cc5f7dc98094f2b 96 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 5 83 8.6E-10 T 22-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family YE0510A 739ed16745fb92772cc5f7dc98094f2b 96 PANTHER PTHR35601 1 96 5.2E-42 T 22-04-2016 YE0510A 739ed16745fb92772cc5f7dc98094f2b 96 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 6 84 2.0E-12 T 22-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family YE0510A 739ed16745fb92772cc5f7dc98094f2b 96 SUPERFAMILY SSF143011 1 84 3.66E-22 T 22-04-2016 YE0510A 739ed16745fb92772cc5f7dc98094f2b 96 PANTHER PTHR35601:SF2 1 96 5.2E-42 T 22-04-2016 YE1307 efaf51e29dfe44c5ee213e3cfb52e6eb 375 PANTHER PTHR10996:SF111 1 330 1.0E-188 T 22-04-2016 YE1307 efaf51e29dfe44c5ee213e3cfb52e6eb 375 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 119 146 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YE1307 efaf51e29dfe44c5ee213e3cfb52e6eb 375 SUPERFAMILY SSF52283 5 129 1.89E-17 T 22-04-2016 YE1307 efaf51e29dfe44c5ee213e3cfb52e6eb 375 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 256 1.5E-31 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 YE1307 efaf51e29dfe44c5ee213e3cfb52e6eb 375 PANTHER PTHR10996 1 330 1.0E-188 T 22-04-2016 YE1307 efaf51e29dfe44c5ee213e3cfb52e6eb 375 SUPERFAMILY SSF51735 91 257 4.89E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain YE1307 efaf51e29dfe44c5ee213e3cfb52e6eb 375 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 8 280 1.4E-17 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 YE1307 efaf51e29dfe44c5ee213e3cfb52e6eb 375 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 197 213 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YE1307 efaf51e29dfe44c5ee213e3cfb52e6eb 375 Pfam PF11890 Domain of unknown function (DUF3410) 289 369 2.5E-31 T 22-04-2016 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181|UniPathway: UPA00244 YE1307 efaf51e29dfe44c5ee213e3cfb52e6eb 375 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 357 47.057 T 22-04-2016 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181|UniPathway: UPA00244 YE1307 efaf51e29dfe44c5ee213e3cfb52e6eb 375 Gene3D G3DSA:3.40.50.720 114 259 2.9E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain YE1307 efaf51e29dfe44c5ee213e3cfb52e6eb 375 Gene3D G3DSA:3.40.50.720 2 113 3.1E-24 T 22-04-2016 IPR016040 NAD(P)-binding domain YE1122 9378259cf13c32687c63470f19b71695 264 SUPERFAMILY SSF53098 89 252 4.05E-40 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE1122 9378259cf13c32687c63470f19b71695 264 Gene3D G3DSA:3.30.420.10 90 246 6.2E-44 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE1122 9378259cf13c32687c63470f19b71695 264 PANTHER PTHR32552:SF26 25 250 2.3E-111 T 22-04-2016 YE1122 9378259cf13c32687c63470f19b71695 264 Pfam PF13276 HTH-like domain 26 80 9.8E-10 T 22-04-2016 IPR025948 HTH-like domain YE1122 9378259cf13c32687c63470f19b71695 264 PANTHER PTHR32552 25 250 2.3E-111 T 22-04-2016 YE1122 9378259cf13c32687c63470f19b71695 264 Pfam PF13683 Integrase core domain 180 246 5.6E-28 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YE3419 db0e93517ecada61e3f890a717178ea3 659 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 302 315 - T 22-04-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 YE3419 db0e93517ecada61e3f890a717178ea3 659 SUPERFAMILY SSF50621 482 588 2.76E-8 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 YE3419 db0e93517ecada61e3f890a717178ea3 659 SUPERFAMILY SSF51419 93 370 4.49E-67 T 22-04-2016 IPR029066 PLP-binding barrel YE3419 db0e93517ecada61e3f890a717178ea3 659 PIRSF PIRSF001336 17 659 8.1E-254 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YE3419 db0e93517ecada61e3f890a717178ea3 659 Gene3D G3DSA:3.20.20.10 96 357 5.4E-60 T 22-04-2016 IPR029066 PLP-binding barrel YE3419 db0e93517ecada61e3f890a717178ea3 659 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 28 658 42.556 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YE3419 db0e93517ecada61e3f890a717178ea3 659 Gene3D G3DSA:2.40.37.10 358 381 3.1E-12 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 YE3419 db0e93517ecada61e3f890a717178ea3 659 Gene3D G3DSA:2.40.37.10 480 588 3.1E-12 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 YE3419 db0e93517ecada61e3f890a717178ea3 659 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 125 143 - T 22-04-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 YE3419 db0e93517ecada61e3f890a717178ea3 659 PRINTS PR01180 Arginine decarboxylase signature 489 510 1.3E-73 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YE3419 db0e93517ecada61e3f890a717178ea3 659 PRINTS PR01180 Arginine decarboxylase signature 171 186 1.3E-73 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YE3419 db0e93517ecada61e3f890a717178ea3 659 PRINTS PR01180 Arginine decarboxylase signature 514 539 1.3E-73 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YE3419 db0e93517ecada61e3f890a717178ea3 659 PRINTS PR01180 Arginine decarboxylase signature 221 243 1.3E-73 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YE3419 db0e93517ecada61e3f890a717178ea3 659 PRINTS PR01180 Arginine decarboxylase signature 93 108 1.3E-73 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YE3419 db0e93517ecada61e3f890a717178ea3 659 PRINTS PR01180 Arginine decarboxylase signature 197 218 1.3E-73 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YE3419 db0e93517ecada61e3f890a717178ea3 659 PRINTS PR01180 Arginine decarboxylase signature 567 588 1.3E-73 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YE3419 db0e93517ecada61e3f890a717178ea3 659 PRINTS PR01180 Arginine decarboxylase signature 348 365 1.3E-73 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YE3419 db0e93517ecada61e3f890a717178ea3 659 PRINTS PR01180 Arginine decarboxylase signature 117 131 1.3E-73 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YE3419 db0e93517ecada61e3f890a717178ea3 659 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 100 369 1.5E-68 T 22-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 YE3419 db0e93517ecada61e3f890a717178ea3 659 PANTHER PTHR11482:SF36 1 391 5.7E-292 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YE3419 db0e93517ecada61e3f890a717178ea3 659 PANTHER PTHR11482:SF36 464 622 5.7E-292 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YE3419 db0e93517ecada61e3f890a717178ea3 659 PANTHER PTHR11482 1 391 5.7E-292 T 22-04-2016 YE3419 db0e93517ecada61e3f890a717178ea3 659 PANTHER PTHR11482 464 622 5.7E-292 T 22-04-2016 YE3419 db0e93517ecada61e3f890a717178ea3 659 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 147 159 8.7E-19 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 YE3419 db0e93517ecada61e3f890a717178ea3 659 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 125 143 8.7E-19 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 YE3419 db0e93517ecada61e3f890a717178ea3 659 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 358 377 8.7E-19 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 YE3419 db0e93517ecada61e3f890a717178ea3 659 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 567 580 8.7E-19 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 YE3419 db0e93517ecada61e3f890a717178ea3 659 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 264 277 8.7E-19 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 YE3419 db0e93517ecada61e3f890a717178ea3 659 TIGRFAM TIGR01273 speA: arginine decarboxylase 32 657 1.2E-269 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 YE3419 db0e93517ecada61e3f890a717178ea3 659 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 373 586 4.4E-24 T 22-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 YE1893 12e58d608edc493392ad6cbc1c511be5 493 Gene3D G3DSA:3.40.810.20 226 484 1.3E-69 T 22-04-2016 YE1893 12e58d608edc493392ad6cbc1c511be5 493 Gene3D G3DSA:3.40.1080.10 9 218 2.0E-39 T 22-04-2016 YE1893 12e58d608edc493392ad6cbc1c511be5 493 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 317 461 1.5E-41 T 22-04-2016 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain YE1893 12e58d608edc493392ad6cbc1c511be5 493 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 2 213 2.4E-58 T 22-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 YE1893 12e58d608edc493392ad6cbc1c511be5 493 TIGRFAM TIGR03458 YgfH_subfam: succinate CoA transferase 8 490 1.1E-217 T 22-04-2016 IPR017821 Succinate CoA transferase GO:0006084|GO:0016740 YE1893 12e58d608edc493392ad6cbc1c511be5 493 PANTHER PTHR21432 9 490 4.6E-236 T 22-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 YE1893 12e58d608edc493392ad6cbc1c511be5 493 SUPERFAMILY SSF100950 227 490 1.51E-68 T 22-04-2016 YE1893 12e58d608edc493392ad6cbc1c511be5 493 SUPERFAMILY SSF100950 8 219 3.27E-56 T 22-04-2016 YE1893 12e58d608edc493392ad6cbc1c511be5 493 PANTHER PTHR21432:SF10 9 490 4.6E-236 T 22-04-2016 YE0339 d385c4d1fef2c9df134af661cddb0cac 764 PANTHER PTHR30191:SF7 1 764 0.0 T 22-04-2016 YE0339 d385c4d1fef2c9df134af661cddb0cac 764 PIRSF PIRSF000379 12 764 0.0 T 22-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 YE0339 d385c4d1fef2c9df134af661cddb0cac 764 Gene3D G3DSA:3.20.70.20 9 762 8.3E-303 T 22-04-2016 YE0339 d385c4d1fef2c9df134af661cddb0cac 764 PANTHER PTHR30191 1 764 0.0 T 22-04-2016 YE0339 d385c4d1fef2c9df134af661cddb0cac 764 ProSitePatterns PS00850 Glycine radical domain signature. 734 742 - T 22-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site YE0339 d385c4d1fef2c9df134af661cddb0cac 764 Pfam PF02901 Pyruvate formate lyase-like 26 618 1.3E-191 T 22-04-2016 IPR004184 Pyruvate formate lyase domain GO:0003824 YE0339 d385c4d1fef2c9df134af661cddb0cac 764 Pfam PF01228 Glycine radical 634 745 4.0E-40 T 22-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 YE0339 d385c4d1fef2c9df134af661cddb0cac 764 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 15 764 0.0 T 22-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 YE0339 d385c4d1fef2c9df134af661cddb0cac 764 SUPERFAMILY SSF51998 9 762 4.35E-277 T 22-04-2016 YE2334 e9b2179ac129937119b0ac9d22b5e445 160 PANTHER PTHR38107:SF2 1 160 6.1E-49 T 22-04-2016 YE2334 e9b2179ac129937119b0ac9d22b5e445 160 PANTHER PTHR38107 1 160 6.1E-49 T 22-04-2016 YE2334 e9b2179ac129937119b0ac9d22b5e445 160 Gene3D G3DSA:1.10.530.40 31 160 6.3E-51 T 22-04-2016 IPR023347 Lysozyme domain GO:0003796 YE2334 e9b2179ac129937119b0ac9d22b5e445 160 SUPERFAMILY SSF53955 5 160 3.43E-52 T 22-04-2016 IPR023346 Lysozyme-like domain YE2334 e9b2179ac129937119b0ac9d22b5e445 160 Pfam PF00959 Phage lysozyme 46 151 2.4E-25 T 22-04-2016 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 YE1143 530989c86866d7c12ec7463d7c5b782f 677 Pfam PF05127 Helicase 227 331 4.4E-33 T 22-04-2016 IPR007807 Helicase domain YE1143 530989c86866d7c12ec7463d7c5b782f 677 Pfam PF05127 Helicase 185 226 2.3E-6 T 22-04-2016 IPR007807 Helicase domain YE1143 530989c86866d7c12ec7463d7c5b782f 677 Pfam PF08351 Domain of unknown function (DUF1726) 54 139 4.8E-5 T 22-04-2016 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal YE1143 530989c86866d7c12ec7463d7c5b782f 677 SUPERFAMILY SSF55729 372 516 1.31E-9 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE1143 530989c86866d7c12ec7463d7c5b782f 677 PANTHER PTHR10925:SF6 8 609 1.7E-267 T 22-04-2016 YE1143 530989c86866d7c12ec7463d7c5b782f 677 Gene3D G3DSA:3.40.630.30 383 419 1.2E-8 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE1143 530989c86866d7c12ec7463d7c5b782f 677 Gene3D G3DSA:3.40.630.30 455 517 1.2E-8 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE1143 530989c86866d7c12ec7463d7c5b782f 677 Hamap MF_01886 tRNA(Met) cytidine acetyltransferase TmcA [tmcA]. 6 662 52.023 T 22-04-2016 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA GO:0000049|GO:0002101|GO:0051391|GO:0051392 KEGG: 00650+2.3.1.19 YE1143 530989c86866d7c12ec7463d7c5b782f 677 SUPERFAMILY SSF52540 154 277 1.25E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1143 530989c86866d7c12ec7463d7c5b782f 677 Gene3D G3DSA:3.40.50.300 149 279 8.5E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1143 530989c86866d7c12ec7463d7c5b782f 677 Pfam PF17176 tRNA-binding domain 539 664 5.4E-44 T 22-04-2016 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain KEGG: 00650+2.3.1.19 YE1143 530989c86866d7c12ec7463d7c5b782f 677 Pfam PF13718 GNAT acetyltransferase 2 480 535 3.2E-6 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YE1143 530989c86866d7c12ec7463d7c5b782f 677 Pfam PF13718 GNAT acetyltransferase 2 370 477 3.6E-11 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YE1143 530989c86866d7c12ec7463d7c5b782f 677 PANTHER PTHR10925 8 609 1.7E-267 T 22-04-2016 IPR032672 TmcA/NAT10/Kre33 GO:0008080 YE3429 59c522b510c15cda6bb9f6c33a4e150c 140 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 8 136 5.5E-58 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 YE3429 59c522b510c15cda6bb9f6c33a4e150c 140 Pfam PF03652 Holliday junction resolvase 5 137 4.7E-43 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 YE3429 59c522b510c15cda6bb9f6c33a4e150c 140 SUPERFAMILY SSF53098 4 137 8.8E-43 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE3429 59c522b510c15cda6bb9f6c33a4e150c 140 Gene3D G3DSA:3.30.420.140 4 138 2.8E-48 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 YE3429 59c522b510c15cda6bb9f6c33a4e150c 140 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 4 139 26.128 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 YE3429 59c522b510c15cda6bb9f6c33a4e150c 140 PANTHER PTHR33317 1 137 1.9E-46 T 22-04-2016 YE3429 59c522b510c15cda6bb9f6c33a4e150c 140 SMART SM00732 4 104 1.2E-42 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 YE3657 4f642f3f413f301bf016f529127d59f2 197 SUPERFAMILY SSF52218 1 193 2.0E-42 T 22-04-2016 IPR029039 Flavoprotein-like domain YE3657 4f642f3f413f301bf016f529127d59f2 197 PANTHER PTHR10204:SF36 1 190 1.5E-131 T 22-04-2016 YE3657 4f642f3f413f301bf016f529127d59f2 197 Gene3D G3DSA:3.40.50.360 1 193 5.6E-47 T 22-04-2016 IPR029039 Flavoprotein-like domain YE3657 4f642f3f413f301bf016f529127d59f2 197 PANTHER PTHR10204 1 190 1.5E-131 T 22-04-2016 YE3657 4f642f3f413f301bf016f529127d59f2 197 Pfam PF02525 Flavodoxin-like fold 3 188 2.1E-35 T 22-04-2016 IPR003680 Flavodoxin-like fold YE3870 8cb2234fd79230efcdfb7ca9a7098206 548 Pfam PF00342 Phosphoglucose isomerase 52 541 1.0E-257 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 YE3870 8cb2234fd79230efcdfb7ca9a7098206 548 PANTHER PTHR11469:SF11 1 548 0.0 T 22-04-2016 YE3870 8cb2234fd79230efcdfb7ca9a7098206 548 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 497 514 - T 22-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 YE3870 8cb2234fd79230efcdfb7ca9a7098206 548 SUPERFAMILY SSF53697 5 547 3.61E-227 T 22-04-2016 YE3870 8cb2234fd79230efcdfb7ca9a7098206 548 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 46 524 42.85 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 YE3870 8cb2234fd79230efcdfb7ca9a7098206 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 338 359 1.5E-55 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 YE3870 8cb2234fd79230efcdfb7ca9a7098206 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 150 169 1.5E-55 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 YE3870 8cb2234fd79230efcdfb7ca9a7098206 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 465 483 1.5E-55 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 YE3870 8cb2234fd79230efcdfb7ca9a7098206 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 483 497 1.5E-55 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 YE3870 8cb2234fd79230efcdfb7ca9a7098206 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 261 279 1.5E-55 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 YE3870 8cb2234fd79230efcdfb7ca9a7098206 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 497 510 1.5E-55 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 YE3870 8cb2234fd79230efcdfb7ca9a7098206 548 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 265 278 - T 22-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 YE3870 8cb2234fd79230efcdfb7ca9a7098206 548 Gene3D G3DSA:1.10.1390.10 507 548 3.8E-23 T 22-04-2016 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 YE3870 8cb2234fd79230efcdfb7ca9a7098206 548 Gene3D G3DSA:3.40.50.10490 99 291 4.8E-91 T 22-04-2016 YE3870 8cb2234fd79230efcdfb7ca9a7098206 548 Gene3D G3DSA:3.40.50.10490 293 506 1.3E-149 T 22-04-2016 YE3870 8cb2234fd79230efcdfb7ca9a7098206 548 Gene3D G3DSA:3.40.50.10490 8 98 1.3E-149 T 22-04-2016 YE3870 8cb2234fd79230efcdfb7ca9a7098206 548 PANTHER PTHR11469 1 548 0.0 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 YE2990 70338e59102881f5eb4105c80f6f6688 194 Gene3D G3DSA:2.30.110.10 27 151 6.9E-22 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 YE2990 70338e59102881f5eb4105c80f6f6688 194 TIGRFAM TIGR04025 PPOX_FMN_DR2398: pyridoxamine 5'-phosphate oxidase, FMN-binding family 14 187 5.3E-67 T 22-04-2016 IPR024029 Pyridoxamine 5-phosphate oxidase, FMN-dependent YE2990 70338e59102881f5eb4105c80f6f6688 194 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 35 127 2.0E-12 T 22-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 YE2990 70338e59102881f5eb4105c80f6f6688 194 SUPERFAMILY SSF50475 19 177 1.78E-18 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 YE2990 70338e59102881f5eb4105c80f6f6688 194 PANTHER PTHR30212 8 182 4.6E-53 T 22-04-2016 YE2990 70338e59102881f5eb4105c80f6f6688 194 PANTHER PTHR30212:SF4 8 182 4.6E-53 T 22-04-2016 YE4122 9a440a4bfef5a08311644cc8cc674591 439 Hamap MF_00455 Xylose isomerase [xylA]. 11 437 52.894 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 YE4122 9a440a4bfef5a08311644cc8cc674591 439 PANTHER PTHR32176:SF0 4 438 3.9E-264 T 22-04-2016 YE4122 9a440a4bfef5a08311644cc8cc674591 439 TIGRFAM TIGR02630 xylose_isom_A: xylose isomerase 4 437 1.3E-215 T 22-04-2016 IPR013452 Xylose isomerase, bacterial-type GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 YE4122 9a440a4bfef5a08311644cc8cc674591 439 Gene3D G3DSA:3.20.20.150 3 439 1.3E-209 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YE4122 9a440a4bfef5a08311644cc8cc674591 439 PRINTS PR00688 Xylose isomerase signature 133 153 5.9E-85 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 YE4122 9a440a4bfef5a08311644cc8cc674591 439 PRINTS PR00688 Xylose isomerase signature 333 344 5.9E-85 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 YE4122 9a440a4bfef5a08311644cc8cc674591 439 PRINTS PR00688 Xylose isomerase signature 180 201 5.9E-85 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 YE4122 9a440a4bfef5a08311644cc8cc674591 439 PRINTS PR00688 Xylose isomerase signature 92 114 5.9E-85 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 YE4122 9a440a4bfef5a08311644cc8cc674591 439 PRINTS PR00688 Xylose isomerase signature 207 226 5.9E-85 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 YE4122 9a440a4bfef5a08311644cc8cc674591 439 PRINTS PR00688 Xylose isomerase signature 229 253 5.9E-85 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 YE4122 9a440a4bfef5a08311644cc8cc674591 439 PRINTS PR00688 Xylose isomerase signature 300 311 5.9E-85 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 YE4122 9a440a4bfef5a08311644cc8cc674591 439 PRINTS PR00688 Xylose isomerase signature 156 175 5.9E-85 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 YE4122 9a440a4bfef5a08311644cc8cc674591 439 PRINTS PR00688 Xylose isomerase signature 271 298 5.9E-85 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 YE4122 9a440a4bfef5a08311644cc8cc674591 439 SUPERFAMILY SSF51658 4 438 1.01E-172 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YE4122 9a440a4bfef5a08311644cc8cc674591 439 PANTHER PTHR32176 4 438 3.9E-264 T 22-04-2016 YE2140 8250523f7806037f99d6d29c4ce39f29 217 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 39 121 1.1E-21 T 22-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 YE2140 8250523f7806037f99d6d29c4ce39f29 217 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 177 217 5.5E-19 T 22-04-2016 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 YE2140 8250523f7806037f99d6d29c4ce39f29 217 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 4 217 6.9E-94 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 YE2140 8250523f7806037f99d6d29c4ce39f29 217 PANTHER PTHR10851:SF0 1 217 2.7E-114 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 YE2140 8250523f7806037f99d6d29c4ce39f29 217 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 15 217 38.194 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 YE2140 8250523f7806037f99d6d29c4ce39f29 217 SUPERFAMILY SSF50475 20 217 2.43E-66 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 YE2140 8250523f7806037f99d6d29c4ce39f29 217 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 187 200 - T 22-04-2016 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 YE2140 8250523f7806037f99d6d29c4ce39f29 217 PIRSF PIRSF000190 1 217 2.5E-81 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 YE2140 8250523f7806037f99d6d29c4ce39f29 217 PANTHER PTHR10851 1 217 2.7E-114 T 22-04-2016 YE2140 8250523f7806037f99d6d29c4ce39f29 217 Gene3D G3DSA:2.30.110.10 21 217 1.4E-81 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 YE4107 ed69ed011d5dc2d2f4f20be42d863743 320 Pfam PF13377 Periplasmic binding protein-like domain 159 316 3.4E-21 T 22-04-2016 YE4107 ed69ed011d5dc2d2f4f20be42d863743 320 SUPERFAMILY SSF47413 1 59 2.49E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE4107 ed69ed011d5dc2d2f4f20be42d863743 320 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.8E-16 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE4107 ed69ed011d5dc2d2f4f20be42d863743 320 Gene3D G3DSA:3.40.50.2300 54 162 1.6E-12 T 22-04-2016 YE4107 ed69ed011d5dc2d2f4f20be42d863743 320 SUPERFAMILY SSF53822 61 317 5.98E-30 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YE4107 ed69ed011d5dc2d2f4f20be42d863743 320 Gene3D G3DSA:3.40.50.2300 163 317 6.4E-26 T 22-04-2016 YE4107 ed69ed011d5dc2d2f4f20be42d863743 320 SMART SM00354 1 71 1.1E-24 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE4107 ed69ed011d5dc2d2f4f20be42d863743 320 PANTHER PTHR30146 1 318 2.3E-55 T 22-04-2016 YE4107 ed69ed011d5dc2d2f4f20be42d863743 320 Gene3D G3DSA:1.10.260.40 2 53 3.3E-22 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE1015 c545d2dd3dac7b140a0e9f97f47f1fa8 599 Pfam PF03144 Elongation factor Tu domain 2 205 275 2.6E-11 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 YE1015 c545d2dd3dac7b140a0e9f97f47f1fa8 599 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 1.3E-300 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 YE1015 c545d2dd3dac7b140a0e9f97f47f1fa8 599 Pfam PF00679 Elongation factor G C-terminus 399 482 6.9E-20 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain YE1015 c545d2dd3dac7b140a0e9f97f47f1fa8 599 Gene3D G3DSA:2.40.30.10 193 289 1.9E-24 T 22-04-2016 YE1015 c545d2dd3dac7b140a0e9f97f47f1fa8 599 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 169 3.7E-17 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 YE1015 c545d2dd3dac7b140a0e9f97f47f1fa8 599 Gene3D G3DSA:3.30.70.240 401 489 1.1E-20 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain YE1015 c545d2dd3dac7b140a0e9f97f47f1fa8 599 Gene3D G3DSA:3.30.70.870 291 369 8.5E-26 T 22-04-2016 YE1015 c545d2dd3dac7b140a0e9f97f47f1fa8 599 SUPERFAMILY SSF52540 2 234 1.83E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1015 c545d2dd3dac7b140a0e9f97f47f1fa8 599 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site YE1015 c545d2dd3dac7b140a0e9f97f47f1fa8 599 Gene3D G3DSA:3.40.50.300 2 192 1.2E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1015 c545d2dd3dac7b140a0e9f97f47f1fa8 599 PRINTS PR00315 GTP-binding elongation factor signature 90 101 4.0E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YE1015 c545d2dd3dac7b140a0e9f97f47f1fa8 599 PRINTS PR00315 GTP-binding elongation factor signature 74 84 4.0E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YE1015 c545d2dd3dac7b140a0e9f97f47f1fa8 599 PRINTS PR00315 GTP-binding elongation factor signature 6 19 4.0E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YE1015 c545d2dd3dac7b140a0e9f97f47f1fa8 599 PRINTS PR00315 GTP-binding elongation factor signature 49 57 4.0E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YE1015 c545d2dd3dac7b140a0e9f97f47f1fa8 599 PRINTS PR00315 GTP-binding elongation factor signature 126 135 4.0E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YE1015 c545d2dd3dac7b140a0e9f97f47f1fa8 599 PANTHER PTHR23115:SF175 397 595 2.7E-280 T 22-04-2016 YE1015 c545d2dd3dac7b140a0e9f97f47f1fa8 599 PANTHER PTHR23115:SF175 2 373 2.7E-280 T 22-04-2016 YE1015 c545d2dd3dac7b140a0e9f97f47f1fa8 599 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 3.8E-52 T 22-04-2016 YE1015 c545d2dd3dac7b140a0e9f97f47f1fa8 599 PANTHER PTHR23115 397 595 2.7E-280 T 22-04-2016 YE1015 c545d2dd3dac7b140a0e9f97f47f1fa8 599 PANTHER PTHR23115 2 373 2.7E-280 T 22-04-2016 YE1015 c545d2dd3dac7b140a0e9f97f47f1fa8 599 SUPERFAMILY SSF54980 292 370 2.48E-18 T 22-04-2016 IPR009022 Elongation factor G, III-V domain YE1015 c545d2dd3dac7b140a0e9f97f47f1fa8 599 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 2.5E-49 T 22-04-2016 IPR013842 GTP-binding protein LepA, C-terminal YE1015 c545d2dd3dac7b140a0e9f97f47f1fa8 599 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 307.679 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 YE1015 c545d2dd3dac7b140a0e9f97f47f1fa8 599 SUPERFAMILY SSF54980 399 493 9.11E-25 T 22-04-2016 IPR009022 Elongation factor G, III-V domain YE0335 03fb938c6eb40027adbf072711803acc 437 SUPERFAMILY SSF102114 45 423 2.09E-90 T 22-04-2016 YE0335 03fb938c6eb40027adbf072711803acc 437 Pfam PF04055 Radical SAM superfamily 59 228 2.3E-18 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 YE0335 03fb938c6eb40027adbf072711803acc 437 PANTHER PTHR13932 1 434 2.0E-190 T 22-04-2016 YE0335 03fb938c6eb40027adbf072711803acc 437 SMART SM00729 53 275 9.4E-54 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 YE0335 03fb938c6eb40027adbf072711803acc 437 PANTHER PTHR13932:SF5 1 434 2.0E-190 T 22-04-2016 YE0335 03fb938c6eb40027adbf072711803acc 437 TIGRFAM TIGR04107 rSAM_HutW: putative heme utilization radical SAM enzyme HutW 16 427 1.2E-174 T 22-04-2016 IPR026332 Putative heme utilization radical SAM enzyme HutW YE0335 03fb938c6eb40027adbf072711803acc 437 Gene3D G3DSA:3.80.30.20 56 256 1.4E-31 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe YE3308 3a79369bb9f7a060ebb4c542167c35f9 441 SUPERFAMILY SSF53633 4 290 3.77E-70 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YE3308 3a79369bb9f7a060ebb4c542167c35f9 441 Gene3D G3DSA:3.40.1160.10 23 290 1.6E-69 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YE3308 3a79369bb9f7a060ebb4c542167c35f9 441 Pfam PF00696 Amino acid kinase family 25 266 3.9E-32 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YE3308 3a79369bb9f7a060ebb4c542167c35f9 441 PIRSF PIRSF000423 1 441 1.3E-211 T 22-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 YE3308 3a79369bb9f7a060ebb4c542167c35f9 441 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 8 440 1.0E-201 T 22-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 YE3308 3a79369bb9f7a060ebb4c542167c35f9 441 PANTHER PTHR30602 1 441 0.0 T 22-04-2016 YE3308 3a79369bb9f7a060ebb4c542167c35f9 441 Gene3D G3DSA:3.40.630.30 293 438 2.6E-38 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE3308 3a79369bb9f7a060ebb4c542167c35f9 441 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 441 240.55 T 22-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 YE3308 3a79369bb9f7a060ebb4c542167c35f9 441 Pfam PF00583 Acetyltransferase (GNAT) family 345 413 1.7E-7 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YE3308 3a79369bb9f7a060ebb4c542167c35f9 441 PANTHER PTHR30602:SF3 1 441 0.0 T 22-04-2016 YE3308 3a79369bb9f7a060ebb4c542167c35f9 441 SUPERFAMILY SSF55729 236 416 5.58E-19 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE0650 b7059407319bbc86ba00ae734621b377 466 ProSitePatterns PS00853 Beta-eliminating lyases pyridoxal-phosphate attachment site. 255 273 - T 22-04-2016 IPR018176 Tryptophanase, conserved site KEGG: 00380+4.1.99.1|UniPathway: UPA00332 YE0650 b7059407319bbc86ba00ae734621b377 466 TIGRFAM TIGR02617 tnaA_trp_ase: tryptophanase 2 465 1.5E-260 T 22-04-2016 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1|UniPathway: UPA00332 YE0650 b7059407319bbc86ba00ae734621b377 466 Gene3D G3DSA:3.40.640.10 58 304 2.5E-87 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YE0650 b7059407319bbc86ba00ae734621b377 466 Hamap MF_00544 Tryptophanase [tnaA]. 1 465 104.161 T 22-04-2016 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1|UniPathway: UPA00332 YE0650 b7059407319bbc86ba00ae734621b377 466 SUPERFAMILY SSF53383 2 465 3.72E-145 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YE0650 b7059407319bbc86ba00ae734621b377 466 Gene3D G3DSA:3.90.1150.10 305 464 5.5E-68 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YE0650 b7059407319bbc86ba00ae734621b377 466 PANTHER PTHR32325 1 466 8.5E-186 T 22-04-2016 YE0650 b7059407319bbc86ba00ae734621b377 466 Pfam PF01212 Beta-eliminating lyase 46 431 9.0E-100 T 22-04-2016 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 YE0650 b7059407319bbc86ba00ae734621b377 466 PIRSF PIRSF001386 1 466 2.9E-224 T 22-04-2016 IPR011166 Beta-eliminating lyase family GO:0009072|GO:0016830 KEGG: 00380+4.1.99.1|UniPathway: UPA00332 YE3050 be21b0224be7ad488cdb024b04813e20 240 Gene3D G3DSA:3.60.21.10 173 221 3.2E-23 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like YE3050 be21b0224be7ad488cdb024b04813e20 240 Gene3D G3DSA:3.60.21.10 1 125 3.2E-23 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like YE3050 be21b0224be7ad488cdb024b04813e20 240 SUPERFAMILY SSF56300 3 237 4.88E-34 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like YE3050 be21b0224be7ad488cdb024b04813e20 240 PANTHER PTHR34990:SF1 1 240 1.1E-132 T 22-04-2016 YE3050 be21b0224be7ad488cdb024b04813e20 240 PANTHER PTHR34990 1 240 1.1E-132 T 22-04-2016 YE3050 be21b0224be7ad488cdb024b04813e20 240 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 232 2.3E-104 T 22-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 YE3050 be21b0224be7ad488cdb024b04813e20 240 Pfam PF00149 Calcineurin-like phosphoesterase 1 199 3.7E-9 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 YE3050 be21b0224be7ad488cdb024b04813e20 240 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 240 128.415 T 22-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 YE3909 97380c028c87b85cdfc86ce0aab9fc8e 130 PANTHER PTHR11758 1 130 1.5E-62 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 YE3909 97380c028c87b85cdfc86ce0aab9fc8e 130 SUPERFAMILY SSF56047 5 129 3.66E-46 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 YE3909 97380c028c87b85cdfc86ce0aab9fc8e 130 Gene3D G3DSA:3.30.1370.30 2 72 2.3E-27 T 22-04-2016 YE3909 97380c028c87b85cdfc86ce0aab9fc8e 130 Pfam PF00410 Ribosomal protein S8 5 129 1.0E-48 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 YE3909 97380c028c87b85cdfc86ce0aab9fc8e 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 YE3909 97380c028c87b85cdfc86ce0aab9fc8e 130 Gene3D G3DSA:3.30.1490.10 74 129 1.1E-28 T 22-04-2016 YE3909 97380c028c87b85cdfc86ce0aab9fc8e 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 31.778 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 YE1714 648d92bd45d447394c84607699123b73 278 Gene3D G3DSA:3.30.1600.10 147 191 1.7E-27 T 22-04-2016 IPR026591 Sirtuin family, catalytic core small domain YE1714 648d92bd45d447394c84607699123b73 278 Gene3D G3DSA:3.30.1600.10 55 94 1.7E-27 T 22-04-2016 IPR026591 Sirtuin family, catalytic core small domain YE1714 648d92bd45d447394c84607699123b73 278 SUPERFAMILY SSF52467 41 267 4.21E-74 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain YE1714 648d92bd45d447394c84607699123b73 278 Gene3D G3DSA:3.40.50.1220 104 146 1.4E-41 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain YE1714 648d92bd45d447394c84607699123b73 278 Gene3D G3DSA:3.40.50.1220 198 264 1.4E-41 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain YE1714 648d92bd45d447394c84607699123b73 278 Gene3D G3DSA:3.40.50.1220 38 54 1.4E-41 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain YE1714 648d92bd45d447394c84607699123b73 278 Pfam PF02146 Sir2 family 46 219 5.5E-50 T 22-04-2016 IPR003000 Sirtuin family GO:0070403 YE1714 648d92bd45d447394c84607699123b73 278 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 39 269 60.705 T 22-04-2016 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 YE1714 648d92bd45d447394c84607699123b73 278 PANTHER PTHR11085 41 266 1.7E-79 T 22-04-2016 IPR003000 Sirtuin family GO:0070403 YE1894 3f4903ff0efcb1644555ecba65ef5868 261 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 259 8.3E-45 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 YE1894 3f4903ff0efcb1644555ecba65ef5868 261 SUPERFAMILY SSF52096 1 260 7.91E-62 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YE1894 3f4903ff0efcb1644555ecba65ef5868 261 PANTHER PTHR11941 1 258 6.8E-71 T 22-04-2016 YE1894 3f4903ff0efcb1644555ecba65ef5868 261 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 100 120 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 YE1894 3f4903ff0efcb1644555ecba65ef5868 261 Gene3D G3DSA:3.90.226.10 1 200 4.0E-47 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YE1894 3f4903ff0efcb1644555ecba65ef5868 261 Gene3D G3DSA:1.10.12.10 203 259 1.1E-15 T 22-04-2016 IPR014748 Crontonase, C-terminal YE1894 3f4903ff0efcb1644555ecba65ef5868 261 PANTHER PTHR11941:SF54 1 258 6.8E-71 T 22-04-2016 YE3748 e5865f3b92311d2ac4452bcd4d5f3bf6 107 PANTHER PTHR35849:SF1 1 105 6.2E-39 T 22-04-2016 YE3748 e5865f3b92311d2ac4452bcd4d5f3bf6 107 SUPERFAMILY SSF52091 6 96 3.53E-18 T 22-04-2016 IPR002645 STAS domain YE3748 e5865f3b92311d2ac4452bcd4d5f3bf6 107 Gene3D G3DSA:3.30.750.24 10 98 1.7E-16 T 22-04-2016 IPR002645 STAS domain YE3748 e5865f3b92311d2ac4452bcd4d5f3bf6 107 PANTHER PTHR35849 1 105 6.2E-39 T 22-04-2016 YE3748 e5865f3b92311d2ac4452bcd4d5f3bf6 107 Pfam PF13466 STAS domain 14 90 8.3E-20 T 22-04-2016 IPR002645 STAS domain YE0550 1d5a6a3a0e8e3d447e34fc3228100a96 639 SMART SM00091 199 267 0.0024 T 22-04-2016 IPR000014 PAS domain YE0550 1d5a6a3a0e8e3d447e34fc3228100a96 639 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 347 360 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YE0550 1d5a6a3a0e8e3d447e34fc3228100a96 639 Gene3D G3DSA:3.30.450.20 199 299 2.4E-12 T 22-04-2016 YE0550 1d5a6a3a0e8e3d447e34fc3228100a96 639 SUPERFAMILY SSF55785 195 298 7.15E-9 T 22-04-2016 IPR000014 PAS domain YE0550 1d5a6a3a0e8e3d447e34fc3228100a96 639 Pfam PF02954 Bacterial regulatory protein, Fis family 584 622 4.2E-9 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YE0550 1d5a6a3a0e8e3d447e34fc3228100a96 639 Pfam PF00158 Sigma-54 interaction domain 327 486 1.4E-38 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 YE0550 1d5a6a3a0e8e3d447e34fc3228100a96 639 Gene3D G3DSA:3.40.50.300 320 492 3.2E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0550 1d5a6a3a0e8e3d447e34fc3228100a96 639 Gene3D G3DSA:1.10.10.60 579 622 1.1E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE0550 1d5a6a3a0e8e3d447e34fc3228100a96 639 SUPERFAMILY SSF46689 532 626 4.66E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE0550 1d5a6a3a0e8e3d447e34fc3228100a96 639 PANTHER PTHR32071:SF16 251 637 3.1E-110 T 22-04-2016 YE0550 1d5a6a3a0e8e3d447e34fc3228100a96 639 Gene3D G3DSA:1.10.8.60 493 567 1.7E-17 T 22-04-2016 YE0550 1d5a6a3a0e8e3d447e34fc3228100a96 639 Pfam PF00989 PAS fold 200 300 4.0E-10 T 22-04-2016 IPR013767 PAS fold GO:0006355 YE0550 1d5a6a3a0e8e3d447e34fc3228100a96 639 PANTHER PTHR32071 251 637 3.1E-110 T 22-04-2016 YE0550 1d5a6a3a0e8e3d447e34fc3228100a96 639 SUPERFAMILY SSF52540 328 563 3.1E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0578 67cc94bb49a31eea4367a674cee2d32a 326 SUPERFAMILY SSF56784 112 316 1.47E-48 T 22-04-2016 IPR023214 HAD-like domain YE0578 67cc94bb49a31eea4367a674cee2d32a 326 PANTHER PTHR10000 1 322 5.4E-219 T 22-04-2016 YE0578 67cc94bb49a31eea4367a674cee2d32a 326 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 98 316 8.0E-89 T 22-04-2016 YE0578 67cc94bb49a31eea4367a674cee2d32a 326 Gene3D G3DSA:3.40.50.1000 177 307 1.6E-38 T 22-04-2016 IPR023214 HAD-like domain YE0578 67cc94bb49a31eea4367a674cee2d32a 326 Pfam PF12710 haloacid dehalogenase-like hydrolase 150 282 1.1E-16 T 22-04-2016 YE0578 67cc94bb49a31eea4367a674cee2d32a 326 PANTHER PTHR10000:SF7 1 322 5.4E-219 T 22-04-2016 YE0578 67cc94bb49a31eea4367a674cee2d32a 326 Gene3D G3DSA:1.10.150.210 127 176 1.4E-28 T 22-04-2016 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|UniPathway: UPA00135 YE0578 67cc94bb49a31eea4367a674cee2d32a 326 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 113 283 4.3E-24 T 22-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 YE0096 11293c4103cf2f6d5d96eea8878b1b84 248 Pfam PF00175 Oxidoreductase NAD-binding domain 111 222 1.3E-18 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 YE0096 11293c4103cf2f6d5d96eea8878b1b84 248 SUPERFAMILY SSF52343 104 248 3.54E-39 T 22-04-2016 YE0096 11293c4103cf2f6d5d96eea8878b1b84 248 PANTHER PTHR19370 4 232 5.0E-102 T 22-04-2016 YE0096 11293c4103cf2f6d5d96eea8878b1b84 248 SUPERFAMILY SSF63380 3 99 9.68E-24 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 YE0096 11293c4103cf2f6d5d96eea8878b1b84 248 Gene3D G3DSA:3.40.50.80 97 248 3.1E-48 T 22-04-2016 YE0096 11293c4103cf2f6d5d96eea8878b1b84 248 PANTHER PTHR19370:SF98 4 232 5.0E-102 T 22-04-2016 YE0096 11293c4103cf2f6d5d96eea8878b1b84 248 Gene3D G3DSA:2.40.30.10 2 96 4.0E-27 T 22-04-2016 YE0096 11293c4103cf2f6d5d96eea8878b1b84 248 Pfam PF00970 Oxidoreductase FAD-binding domain 20 90 7.0E-8 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain YE2811 a50cd2965ecfb9f0601f0694ad138805 719 Pfam PF01590 GAF domain 209 352 1.0E-10 T 22-04-2016 IPR003018 GAF domain GO:0005515 YE2811 a50cd2965ecfb9f0601f0694ad138805 719 Gene3D G3DSA:1.10.8.60 561 613 2.6E-23 T 22-04-2016 YE2811 a50cd2965ecfb9f0601f0694ad138805 719 PANTHER PTHR32071:SF16 339 718 2.1E-149 T 22-04-2016 YE2811 a50cd2965ecfb9f0601f0694ad138805 719 SUPERFAMILY SSF46689 601 707 1.93E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE2811 a50cd2965ecfb9f0601f0694ad138805 719 SUPERFAMILY SSF55781 189 365 4.14E-21 T 22-04-2016 IPR029016 GAF domain-like YE2811 a50cd2965ecfb9f0601f0694ad138805 719 Pfam PF00158 Sigma-54 interaction domain 388 554 4.0E-70 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 YE2811 a50cd2965ecfb9f0601f0694ad138805 719 PANTHER PTHR32071 339 718 2.1E-149 T 22-04-2016 YE2811 a50cd2965ecfb9f0601f0694ad138805 719 SMART SM00382 408 552 8.0E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain YE2811 a50cd2965ecfb9f0601f0694ad138805 719 Gene3D G3DSA:1.10.10.60 614 707 7.0E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE2811 a50cd2965ecfb9f0601f0694ad138805 719 SUPERFAMILY SSF52540 387 624 1.18E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2811 a50cd2965ecfb9f0601f0694ad138805 719 Gene3D G3DSA:3.30.450.40 17 175 6.0E-10 T 22-04-2016 IPR029016 GAF domain-like YE2811 a50cd2965ecfb9f0601f0694ad138805 719 Gene3D G3DSA:3.30.450.40 184 366 4.3E-19 T 22-04-2016 IPR029016 GAF domain-like YE2811 a50cd2965ecfb9f0601f0694ad138805 719 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 601 610 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site YE2811 a50cd2965ecfb9f0601f0694ad138805 719 Gene3D G3DSA:3.40.50.300 384 560 2.0E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2811 a50cd2965ecfb9f0601f0694ad138805 719 SUPERFAMILY SSF55781 16 187 3.27E-12 T 22-04-2016 IPR029016 GAF domain-like YE2811 a50cd2965ecfb9f0601f0694ad138805 719 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 474 489 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YE2811 a50cd2965ecfb9f0601f0694ad138805 719 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 412 425 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YE2811 a50cd2965ecfb9f0601f0694ad138805 719 SMART SM00065 208 362 9.7E-16 T 22-04-2016 IPR003018 GAF domain GO:0005515 YE2811 a50cd2965ecfb9f0601f0694ad138805 719 SMART SM00065 32 180 0.024 T 22-04-2016 IPR003018 GAF domain GO:0005515 YE3637 7b82f8ff892c555f309811afc98fd18f 372 SUPERFAMILY SSF52540 145 329 1.37E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3637 7b82f8ff892c555f309811afc98fd18f 372 Gene3D G3DSA:3.40.50.300 146 224 3.1E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3637 7b82f8ff892c555f309811afc98fd18f 372 Gene3D G3DSA:3.40.50.300 227 329 8.1E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3141 285800b18d1e41eccc2f0a9388e9bf30 318 SUPERFAMILY SSF49503 124 282 7.74E-53 T 22-04-2016 IPR008972 Cupredoxin YE3141 285800b18d1e41eccc2f0a9388e9bf30 318 PANTHER PTHR22888 1 269 4.2E-163 T 22-04-2016 YE3141 285800b18d1e41eccc2f0a9388e9bf30 318 Gene3D G3DSA:1.10.287.90 27 113 5.0E-35 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 YE3141 285800b18d1e41eccc2f0a9388e9bf30 318 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 149 220 1.2E-5 T 22-04-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 YE3141 285800b18d1e41eccc2f0a9388e9bf30 318 PIRSF PIRSF000292 1 313 1.8E-132 T 22-04-2016 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 YE3141 285800b18d1e41eccc2f0a9388e9bf30 318 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 13 240 4.2E-114 T 22-04-2016 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 YE3141 285800b18d1e41eccc2f0a9388e9bf30 318 PANTHER PTHR22888:SF13 1 269 4.2E-163 T 22-04-2016 YE3141 285800b18d1e41eccc2f0a9388e9bf30 318 Gene3D G3DSA:2.60.40.420 124 279 7.1E-42 T 22-04-2016 IPR008972 Cupredoxin YE3141 285800b18d1e41eccc2f0a9388e9bf30 318 Pfam PF06481 COX Aromatic Rich Motif 240 286 2.4E-21 T 22-04-2016 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 YE3141 285800b18d1e41eccc2f0a9388e9bf30 318 SUPERFAMILY SSF81464 18 116 2.29E-23 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 YE0324 5764946a06daf37bdf346a3873541275 502 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 3.4E-14 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YE0324 5764946a06daf37bdf346a3873541275 502 SUPERFAMILY SSF46785 1 75 2.27E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0324 5764946a06daf37bdf346a3873541275 502 PANTHER PTHR11751:SF275 80 471 5.6E-175 T 22-04-2016 YE0324 5764946a06daf37bdf346a3873541275 502 SUPERFAMILY SSF53383 103 466 6.88E-92 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YE0324 5764946a06daf37bdf346a3873541275 502 PANTHER PTHR11751 80 471 5.6E-175 T 22-04-2016 YE0324 5764946a06daf37bdf346a3873541275 502 Gene3D G3DSA:1.10.10.10 2 67 3.2E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0324 5764946a06daf37bdf346a3873541275 502 Gene3D G3DSA:3.90.1150.10 352 463 1.4E-6 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YE0324 5764946a06daf37bdf346a3873541275 502 SMART SM00345 7 66 1.2E-19 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YE0324 5764946a06daf37bdf346a3873541275 502 Gene3D G3DSA:3.40.640.10 136 351 1.3E-67 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YE0324 5764946a06daf37bdf346a3873541275 502 Pfam PF00155 Aminotransferase class I and II 105 461 7.0E-35 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YE1153 42e5c408cbe917431e6b1385418365f2 209 PANTHER PTHR26402 5 209 4.4E-98 T 22-04-2016 YE1153 42e5c408cbe917431e6b1385418365f2 209 SUPERFAMILY SSF46894 130 207 6.12E-22 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YE1153 42e5c408cbe917431e6b1385418365f2 209 Gene3D G3DSA:3.40.50.2300 3 146 3.8E-36 T 22-04-2016 YE1153 42e5c408cbe917431e6b1385418365f2 209 SMART SM00448 5 118 2.4E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE1153 42e5c408cbe917431e6b1385418365f2 209 Pfam PF00072 Response regulator receiver domain 7 118 2.2E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE1153 42e5c408cbe917431e6b1385418365f2 209 SMART SM00421 146 203 1.3E-24 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE1153 42e5c408cbe917431e6b1385418365f2 209 PANTHER PTHR26402:SF458 5 209 4.4E-98 T 22-04-2016 YE1153 42e5c408cbe917431e6b1385418365f2 209 Gene3D G3DSA:1.10.10.10 147 206 1.0E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1153 42e5c408cbe917431e6b1385418365f2 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE1153 42e5c408cbe917431e6b1385418365f2 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 5.2E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE1153 42e5c408cbe917431e6b1385418365f2 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 5.2E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE1153 42e5c408cbe917431e6b1385418365f2 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 5.2E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE1153 42e5c408cbe917431e6b1385418365f2 209 SUPERFAMILY SSF52172 4 135 6.26E-33 T 22-04-2016 IPR011006 CheY-like superfamily YE1153 42e5c408cbe917431e6b1385418365f2 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 202 2.9E-22 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE1472 852711af7d5643479767138c365779af 455 PANTHER PTHR30182:SF5 1 452 0.0 T 22-04-2016 YE1472 852711af7d5643479767138c365779af 455 Pfam PF03313 Serine dehydratase alpha chain 184 448 5.5E-96 T 22-04-2016 IPR005130 Serine dehydratase-like, alpha subunit YE1472 852711af7d5643479767138c365779af 455 PANTHER PTHR30182 1 452 0.0 T 22-04-2016 YE1472 852711af7d5643479767138c365779af 455 SUPERFAMILY SSF143548 16 158 3.14E-44 T 22-04-2016 IPR029009 Allosteric substrate binding domain YE1472 852711af7d5643479767138c365779af 455 Gene3D G3DSA:3.30.1330.90 10 158 9.5E-52 T 22-04-2016 IPR029009 Allosteric substrate binding domain YE1472 852711af7d5643479767138c365779af 455 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 2.0E-219 T 22-04-2016 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 YE1472 852711af7d5643479767138c365779af 455 Pfam PF03315 Serine dehydratase beta chain 3 155 2.2E-53 T 22-04-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 YE3151 9cbf34ec0489fed448bff98a07dd74de 483 Gene3D G3DSA:3.40.250.10 397 481 9.8E-10 T 22-04-2016 IPR001763 Rhodanese-like domain YE3151 9cbf34ec0489fed448bff98a07dd74de 483 SUPERFAMILY SSF143437 1 174 2.27E-47 T 22-04-2016 YE3151 9cbf34ec0489fed448bff98a07dd74de 483 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 483 229.834 T 22-04-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 UniPathway: UPA00060 YE3151 9cbf34ec0489fed448bff98a07dd74de 483 SUPERFAMILY SSF52821 390 482 1.24E-11 T 22-04-2016 IPR001763 Rhodanese-like domain YE3151 9cbf34ec0489fed448bff98a07dd74de 483 Gene3D G3DSA:3.40.50.620 174 334 2.9E-37 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YE3151 9cbf34ec0489fed448bff98a07dd74de 483 PANTHER PTHR14911:SF15 3 418 2.0E-290 T 22-04-2016 YE3151 9cbf34ec0489fed448bff98a07dd74de 483 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 376 1.7E-130 T 22-04-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 UniPathway: UPA00060 YE3151 9cbf34ec0489fed448bff98a07dd74de 483 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 176 370 1.7E-79 T 22-04-2016 IPR020536 Thil, AANH domain GO:0004810 UniPathway: UPA00060 YE3151 9cbf34ec0489fed448bff98a07dd74de 483 Pfam PF02926 THUMP domain 30 162 3.9E-24 T 22-04-2016 IPR004114 THUMP domain GO:0003723 YE3151 9cbf34ec0489fed448bff98a07dd74de 483 SMART SM00981 76 166 8.9E-23 T 22-04-2016 IPR004114 THUMP domain GO:0003723 YE3151 9cbf34ec0489fed448bff98a07dd74de 483 PANTHER PTHR14911 3 418 2.0E-290 T 22-04-2016 YE3151 9cbf34ec0489fed448bff98a07dd74de 483 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 384 483 1.7E-42 T 22-04-2016 IPR026340 Thiazole biosynthesis domain GO:0052837 UniPathway: UPA00060 YE3151 9cbf34ec0489fed448bff98a07dd74de 483 SUPERFAMILY SSF52402 175 373 6.84E-42 T 22-04-2016 YE3790 2aef16e78873a10925e4eaa1e9d601a0 181 Gene3D G3DSA:1.10.60.30 111 180 1.0E-31 T 22-04-2016 IPR023153 PSPTO4464-like domain YE3790 2aef16e78873a10925e4eaa1e9d601a0 181 PANTHER PTHR38101 4 181 3.3E-88 T 22-04-2016 YE3790 2aef16e78873a10925e4eaa1e9d601a0 181 PIRSF PIRSF016183 10 181 2.8E-73 T 22-04-2016 IPR006839 Ribosome-associated, YjgA YE3790 2aef16e78873a10925e4eaa1e9d601a0 181 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 15 179 24.145 T 22-04-2016 IPR006839 Ribosome-associated, YjgA YE3790 2aef16e78873a10925e4eaa1e9d601a0 181 Gene3D G3DSA:1.10.60.30 35 109 2.0E-31 T 22-04-2016 IPR023153 PSPTO4464-like domain YE3790 2aef16e78873a10925e4eaa1e9d601a0 181 PANTHER PTHR38101:SF1 4 181 3.3E-88 T 22-04-2016 YE3790 2aef16e78873a10925e4eaa1e9d601a0 181 SUPERFAMILY SSF158710 36 179 9.55E-53 T 22-04-2016 YE3790 2aef16e78873a10925e4eaa1e9d601a0 181 Pfam PF04751 Protein of unknown function (DUF615) 25 175 1.4E-57 T 22-04-2016 IPR006839 Ribosome-associated, YjgA YE1557 0fc1dd5cbc93ba69d784de65c3e0ed14 623 Gene3D G3DSA:1.10.101.10 216 251 4.5E-24 T 22-04-2016 IPR002477 Peptidoglycan binding-like YE1557 0fc1dd5cbc93ba69d784de65c3e0ed14 623 Gene3D G3DSA:1.10.101.10 321 364 4.5E-24 T 22-04-2016 IPR002477 Peptidoglycan binding-like YE1557 0fc1dd5cbc93ba69d784de65c3e0ed14 623 Gene3D G3DSA:2.40.440.10 494 542 5.3E-13 T 22-04-2016 YE1557 0fc1dd5cbc93ba69d784de65c3e0ed14 623 Gene3D G3DSA:2.40.440.10 378 426 5.3E-13 T 22-04-2016 YE1557 0fc1dd5cbc93ba69d784de65c3e0ed14 623 Pfam PF01471 Putative peptidoglycan binding domain 320 355 1.1E-7 T 22-04-2016 IPR002477 Peptidoglycan binding-like YE1557 0fc1dd5cbc93ba69d784de65c3e0ed14 623 PANTHER PTHR30582:SF10 320 439 3.4E-281 T 22-04-2016 YE1557 0fc1dd5cbc93ba69d784de65c3e0ed14 623 PANTHER PTHR30582:SF10 34 235 3.4E-281 T 22-04-2016 YE1557 0fc1dd5cbc93ba69d784de65c3e0ed14 623 PANTHER PTHR30582:SF10 476 621 3.4E-281 T 22-04-2016 YE1557 0fc1dd5cbc93ba69d784de65c3e0ed14 623 Pfam PF03734 L,D-transpeptidase catalytic domain 382 551 6.5E-30 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 YE1557 0fc1dd5cbc93ba69d784de65c3e0ed14 623 SUPERFAMILY SSF47090 319 363 4.87E-11 T 22-04-2016 IPR002477 Peptidoglycan binding-like YE1557 0fc1dd5cbc93ba69d784de65c3e0ed14 623 SUPERFAMILY SSF141523 383 435 4.58E-19 T 22-04-2016 YE1557 0fc1dd5cbc93ba69d784de65c3e0ed14 623 SUPERFAMILY SSF141523 492 541 4.58E-19 T 22-04-2016 YE1557 0fc1dd5cbc93ba69d784de65c3e0ed14 623 PANTHER PTHR30582 320 439 3.4E-281 T 22-04-2016 YE1557 0fc1dd5cbc93ba69d784de65c3e0ed14 623 PANTHER PTHR30582 34 235 3.4E-281 T 22-04-2016 YE1557 0fc1dd5cbc93ba69d784de65c3e0ed14 623 PANTHER PTHR30582 476 621 3.4E-281 T 22-04-2016 YE0712 90e93135cbe0574d44c6c3c20a94541b 533 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 1 22 3.1E-5 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal YE0712 90e93135cbe0574d44c6c3c20a94541b 533 PANTHER PTHR11709 378 531 6.3E-119 T 22-04-2016 YE0712 90e93135cbe0574d44c6c3c20a94541b 533 PANTHER PTHR11709 47 340 6.3E-119 T 22-04-2016 YE0712 90e93135cbe0574d44c6c3c20a94541b 533 Pfam PF07731 Multicopper oxidase 417 532 3.3E-24 T 22-04-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 YE0712 90e93135cbe0574d44c6c3c20a94541b 533 SUPERFAMILY SSF49503 172 291 1.36E-31 T 22-04-2016 IPR008972 Cupredoxin YE0712 90e93135cbe0574d44c6c3c20a94541b 533 SUPERFAMILY SSF49503 34 168 2.06E-31 T 22-04-2016 IPR008972 Cupredoxin YE0712 90e93135cbe0574d44c6c3c20a94541b 533 Gene3D G3DSA:2.60.40.420 172 307 4.2E-31 T 22-04-2016 IPR008972 Cupredoxin YE0712 90e93135cbe0574d44c6c3c20a94541b 533 Gene3D G3DSA:2.60.40.420 368 531 5.2E-30 T 22-04-2016 IPR008972 Cupredoxin YE0712 90e93135cbe0574d44c6c3c20a94541b 533 SUPERFAMILY SSF49503 408 531 7.46E-26 T 22-04-2016 IPR008972 Cupredoxin YE0712 90e93135cbe0574d44c6c3c20a94541b 533 PANTHER PTHR11709:SF2 378 531 6.3E-119 T 22-04-2016 YE0712 90e93135cbe0574d44c6c3c20a94541b 533 PANTHER PTHR11709:SF2 47 340 6.3E-119 T 22-04-2016 YE0712 90e93135cbe0574d44c6c3c20a94541b 533 Gene3D G3DSA:2.60.40.420 33 171 1.5E-36 T 22-04-2016 IPR008972 Cupredoxin YE0712 90e93135cbe0574d44c6c3c20a94541b 533 Pfam PF00394 Multicopper oxidase 219 290 8.9E-6 T 22-04-2016 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 YE0712 90e93135cbe0574d44c6c3c20a94541b 533 ProSitePatterns PS00080 Multicopper oxidases signature 2. 514 525 - T 22-04-2016 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 YE0712 90e93135cbe0574d44c6c3c20a94541b 533 Pfam PF07732 Multicopper oxidase 55 166 2.8E-32 T 22-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 YE0542 918e6d219ef97cee7abcafe8f6daa97a 477 SUPERFAMILY SSF47831 276 391 4.05E-28 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 YE0542 918e6d219ef97cee7abcafe8f6daa97a 477 SUPERFAMILY SSF55594 157 240 2.62E-20 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YE0542 918e6d219ef97cee7abcafe8f6daa97a 477 Gene3D G3DSA:1.10.274.10 276 380 1.2E-30 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 YE0542 918e6d219ef97cee7abcafe8f6daa97a 477 Pfam PF00381 PTS HPr component phosphorylation site 158 234 2.7E-17 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YE0542 918e6d219ef97cee7abcafe8f6daa97a 477 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 166 173 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site YE0542 918e6d219ef97cee7abcafe8f6daa97a 477 Gene3D G3DSA:3.40.50.510 1 130 9.8E-46 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 YE0542 918e6d219ef97cee7abcafe8f6daa97a 477 Gene3D G3DSA:3.30.1340.10 156 240 9.6E-25 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YE0542 918e6d219ef97cee7abcafe8f6daa97a 477 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 157 233 2.1E-15 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YE0542 918e6d219ef97cee7abcafe8f6daa97a 477 SUPERFAMILY SSF52009 374 475 2.35E-20 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 YE0542 918e6d219ef97cee7abcafe8f6daa97a 477 Pfam PF00391 PEP-utilising enzyme, mobile domain 401 472 1.1E-12 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 YE0542 918e6d219ef97cee7abcafe8f6daa97a 477 TIGRFAM TIGR02364 dha_pts: dihydroxyacetone kinase, phosphotransfer subunit 2 125 8.4E-37 T 22-04-2016 IPR012844 Dihydroxyacetone kinase phosphotransferase subunit, N-terminal domain YE0542 918e6d219ef97cee7abcafe8f6daa97a 477 Gene3D G3DSA:3.50.30.10 381 474 1.1E-20 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 YE0542 918e6d219ef97cee7abcafe8f6daa97a 477 Pfam PF05524 PEP-utilising enzyme, N-terminal 252 374 1.4E-20 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 YE0542 918e6d219ef97cee7abcafe8f6daa97a 477 Pfam PF03610 PTS system fructose IIA component 4 119 1.0E-24 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 YE0542 918e6d219ef97cee7abcafe8f6daa97a 477 PANTHER PTHR38594 1 134 2.9E-33 T 22-04-2016 YE0542 918e6d219ef97cee7abcafe8f6daa97a 477 PRINTS PR00107 Phosphocarrier protein signature 191 206 1.4E-8 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YE0542 918e6d219ef97cee7abcafe8f6daa97a 477 PRINTS PR00107 Phosphocarrier protein signature 166 182 1.4E-8 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YE0542 918e6d219ef97cee7abcafe8f6daa97a 477 PRINTS PR00107 Phosphocarrier protein signature 206 223 1.4E-8 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YE0542 918e6d219ef97cee7abcafe8f6daa97a 477 SUPERFAMILY SSF53062 1 128 2.75E-32 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 YE2269 92b5773910b538da2f22fae2ba74569b 292 PIRSF PIRSF016020 8 292 7.4E-54 T 22-04-2016 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 YE2269 92b5773910b538da2f22fae2ba74569b 292 SUPERFAMILY SSF74650 8 273 1.76E-71 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 YE2269 92b5773910b538da2f22fae2ba74569b 292 PANTHER PTHR11122 6 292 3.5E-130 T 22-04-2016 YE2269 92b5773910b538da2f22fae2ba74569b 292 Gene3D G3DSA:2.70.98.10 11 286 8.7E-83 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 YE2269 92b5773910b538da2f22fae2ba74569b 292 PANTHER PTHR11122:SF14 6 292 3.5E-130 T 22-04-2016 YE2269 92b5773910b538da2f22fae2ba74569b 292 Pfam PF01263 Aldose 1-epimerase 29 272 1.3E-44 T 22-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 YE1082 cbf34f5a30dce36f9f1dd9beffe37282 525 SUPERFAMILY SSF52402 194 446 2.65E-55 T 22-04-2016 YE1082 cbf34f5a30dce36f9f1dd9beffe37282 525 SUPERFAMILY SSF54810 405 525 1.7E-51 T 22-04-2016 YE1082 cbf34f5a30dce36f9f1dd9beffe37282 525 Gene3D G3DSA:3.40.50.880 9 204 5.0E-60 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YE1082 cbf34f5a30dce36f9f1dd9beffe37282 525 Pfam PF02540 NAD synthase 223 255 4.7E-6 T 22-04-2016 IPR022310 NAD/GMP synthase YE1082 cbf34f5a30dce36f9f1dd9beffe37282 525 Gene3D G3DSA:3.40.50.620 209 399 1.4E-55 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YE1082 cbf34f5a30dce36f9f1dd9beffe37282 525 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 525 55.871 T 22-04-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 YE1082 cbf34f5a30dce36f9f1dd9beffe37282 525 PANTHER PTHR11922 3 522 3.4E-289 T 22-04-2016 YE1082 cbf34f5a30dce36f9f1dd9beffe37282 525 PRINTS PR00097 Anthranilate synthase component II signature 54 63 1.1E-6 T 22-04-2016 YE1082 cbf34f5a30dce36f9f1dd9beffe37282 525 PRINTS PR00097 Anthranilate synthase component II signature 177 190 1.1E-6 T 22-04-2016 YE1082 cbf34f5a30dce36f9f1dd9beffe37282 525 PRINTS PR00097 Anthranilate synthase component II signature 81 92 1.1E-6 T 22-04-2016 YE1082 cbf34f5a30dce36f9f1dd9beffe37282 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 8.9E-8 T 22-04-2016 YE1082 cbf34f5a30dce36f9f1dd9beffe37282 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 177 190 8.9E-8 T 22-04-2016 YE1082 cbf34f5a30dce36f9f1dd9beffe37282 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 8.9E-8 T 22-04-2016 YE1082 cbf34f5a30dce36f9f1dd9beffe37282 525 PANTHER PTHR11922:SF2 3 522 3.4E-289 T 22-04-2016 YE1082 cbf34f5a30dce36f9f1dd9beffe37282 525 Pfam PF00958 GMP synthase C terminal domain 433 524 7.0E-44 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 YE1082 cbf34f5a30dce36f9f1dd9beffe37282 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 5.1E-6 T 22-04-2016 YE1082 cbf34f5a30dce36f9f1dd9beffe37282 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 5.1E-6 T 22-04-2016 YE1082 cbf34f5a30dce36f9f1dd9beffe37282 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 5.1E-6 T 22-04-2016 YE1082 cbf34f5a30dce36f9f1dd9beffe37282 525 Gene3D G3DSA:3.30.300.10 401 525 1.4E-53 T 22-04-2016 YE1082 cbf34f5a30dce36f9f1dd9beffe37282 525 SUPERFAMILY SSF52317 4 204 9.34E-56 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YE1082 cbf34f5a30dce36f9f1dd9beffe37282 525 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 213 525 1.1E-153 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 YE1082 cbf34f5a30dce36f9f1dd9beffe37282 525 Pfam PF00117 Glutamine amidotransferase class-I 12 200 1.7E-39 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 YE1082 cbf34f5a30dce36f9f1dd9beffe37282 525 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 205 2.0E-83 T 22-04-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 YE1550 185c3b2c5505eae6d57326dcd7bd97b8 250 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 248 46.165 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 YE1550 185c3b2c5505eae6d57326dcd7bd97b8 250 SUPERFAMILY SSF53448 3 247 4.93E-67 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YE1550 185c3b2c5505eae6d57326dcd7bd97b8 250 Pfam PF02348 Cytidylyltransferase 4 221 5.3E-71 T 22-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 YE1550 185c3b2c5505eae6d57326dcd7bd97b8 250 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 241 2.5E-123 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 YE1550 185c3b2c5505eae6d57326dcd7bd97b8 250 Gene3D G3DSA:3.90.550.10 1 247 3.8E-86 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YE1550 185c3b2c5505eae6d57326dcd7bd97b8 250 PANTHER PTHR21485 1 250 8.8E-124 T 22-04-2016 YE1550 185c3b2c5505eae6d57326dcd7bd97b8 250 PANTHER PTHR21485:SF4 1 250 8.8E-124 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 YE2957 0590ad2c273713a527b13a58d5c2a1c1 481 Gene3D G3DSA:3.40.50.620 2 149 9.7E-46 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YE2957 0590ad2c273713a527b13a58d5c2a1c1 481 Gene3D G3DSA:1.25.40.80 150 287 7.0E-45 T 22-04-2016 YE2957 0590ad2c273713a527b13a58d5c2a1c1 481 Pfam PF03441 FAD binding domain of DNA photolyase 277 471 5.6E-81 T 22-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain YE2957 0590ad2c273713a527b13a58d5c2a1c1 481 PANTHER PTHR11455 1 475 7.4E-216 T 22-04-2016 YE2957 0590ad2c273713a527b13a58d5c2a1c1 481 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 347 366 - T 22-04-2016 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal YE2957 0590ad2c273713a527b13a58d5c2a1c1 481 SUPERFAMILY SSF48173 193 474 3.4E-108 T 22-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain YE2957 0590ad2c273713a527b13a58d5c2a1c1 481 Gene3D G3DSA:1.10.579.10 288 474 1.1E-77 T 22-04-2016 YE2957 0590ad2c273713a527b13a58d5c2a1c1 481 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 327 339 - T 22-04-2016 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal YE2957 0590ad2c273713a527b13a58d5c2a1c1 481 Pfam PF00875 DNA photolyase 5 174 4.1E-43 T 22-04-2016 IPR006050 DNA photolyase, N-terminal YE2957 0590ad2c273713a527b13a58d5c2a1c1 481 SUPERFAMILY SSF52425 3 200 1.83E-55 T 22-04-2016 IPR006050 DNA photolyase, N-terminal YE2957 0590ad2c273713a527b13a58d5c2a1c1 481 PRINTS PR00147 DNA photolyase signature 327 343 2.5E-30 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 YE2957 0590ad2c273713a527b13a58d5c2a1c1 481 PRINTS PR00147 DNA photolyase signature 145 161 2.5E-30 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 YE2957 0590ad2c273713a527b13a58d5c2a1c1 481 PRINTS PR00147 DNA photolyase signature 347 365 2.5E-30 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 YE2957 0590ad2c273713a527b13a58d5c2a1c1 481 PRINTS PR00147 DNA photolyase signature 386 400 2.5E-30 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 YE2957 0590ad2c273713a527b13a58d5c2a1c1 481 PANTHER PTHR11455:SF18 1 475 7.4E-216 T 22-04-2016 YE2749 03b839e6ef164dd7ef54c6b8fba4b5fe 357 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 4 351 5.6E-100 T 22-04-2016 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443|UniPathway: UPA00148 YE2749 03b839e6ef164dd7ef54c6b8fba4b5fe 357 Pfam PF00155 Aminotransferase class I and II 21 349 2.7E-37 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YE2749 03b839e6ef164dd7ef54c6b8fba4b5fe 357 Gene3D G3DSA:3.40.640.10 35 253 3.5E-60 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YE2749 03b839e6ef164dd7ef54c6b8fba4b5fe 357 PANTHER PTHR11751:SF338 7 353 1.7E-80 T 22-04-2016 YE2749 03b839e6ef164dd7ef54c6b8fba4b5fe 357 SUPERFAMILY SSF53383 3 353 2.96E-74 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YE2749 03b839e6ef164dd7ef54c6b8fba4b5fe 357 Gene3D G3DSA:3.90.1150.10 254 354 5.1E-28 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YE2749 03b839e6ef164dd7ef54c6b8fba4b5fe 357 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 210 223 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 YE2749 03b839e6ef164dd7ef54c6b8fba4b5fe 357 PANTHER PTHR11751 7 353 1.7E-80 T 22-04-2016 YE3749 45a5ad5e422ba3fc339600b4e1e2377e 208 Gene3D G3DSA:3.10.450.50 24 68 8.6E-17 T 22-04-2016 IPR032710 NTF2-like domain YE3749 45a5ad5e422ba3fc339600b4e1e2377e 208 Gene3D G3DSA:3.10.450.50 112 170 8.6E-17 T 22-04-2016 IPR032710 NTF2-like domain YE3749 45a5ad5e422ba3fc339600b4e1e2377e 208 PANTHER PTHR36573 1 208 7.4E-78 T 22-04-2016 YE3749 45a5ad5e422ba3fc339600b4e1e2377e 208 PIRSF PIRSF004649 1 208 2.4E-58 T 22-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC YE3749 45a5ad5e422ba3fc339600b4e1e2377e 208 Pfam PF05494 MlaC protein 31 195 1.2E-51 T 22-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC YE3749 45a5ad5e422ba3fc339600b4e1e2377e 208 Gene3D G3DSA:1.10.10.640 171 196 1.3E-20 T 22-04-2016 IPR023094 Toluene tolerance protein, alpha-helical YE3749 45a5ad5e422ba3fc339600b4e1e2377e 208 Gene3D G3DSA:1.10.10.640 69 109 1.3E-20 T 22-04-2016 IPR023094 Toluene tolerance protein, alpha-helical YE2780 9406843240b45551ee82f27824e814f9 452 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 55 438 1.2E-178 T 22-04-2016 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 YE2780 9406843240b45551ee82f27824e814f9 452 Pfam PF03606 C4-dicarboxylate anaerobic carrier 2 448 8.0E-131 T 22-04-2016 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 YE2780 9406843240b45551ee82f27824e814f9 452 PANTHER PTHR42002 1 452 5.3E-287 T 22-04-2016 YE2780 9406843240b45551ee82f27824e814f9 452 PANTHER PTHR42002:SF2 1 452 5.3E-287 T 22-04-2016 YE1351 b6aac890507a7ff44c28fdeb3e8b4e9f 180 Pfam PF12838 4Fe-4S dicluster domain 59 113 6.6E-12 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YE1351 b6aac890507a7ff44c28fdeb3e8b4e9f 180 PANTHER PTHR10849:SF13 8 180 7.3E-83 T 22-04-2016 YE1351 b6aac890507a7ff44c28fdeb3e8b4e9f 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 60 71 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YE1351 b6aac890507a7ff44c28fdeb3e8b4e9f 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YE1351 b6aac890507a7ff44c28fdeb3e8b4e9f 180 SUPERFAMILY SSF54862 33 156 2.55E-29 T 22-04-2016 YE1351 b6aac890507a7ff44c28fdeb3e8b4e9f 180 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 7 147 26.945 T 22-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 YE1351 b6aac890507a7ff44c28fdeb3e8b4e9f 180 Gene3D G3DSA:3.30.70.20 26 117 5.6E-19 T 22-04-2016 YE1351 b6aac890507a7ff44c28fdeb3e8b4e9f 180 PANTHER PTHR10849 8 180 7.3E-83 T 22-04-2016 YE1351 b6aac890507a7ff44c28fdeb3e8b4e9f 180 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 16 137 2.0E-51 T 22-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 YE2554 0d66c05b5cec9091da3c598a24d26beb 227 PANTHER PTHR34933:SF1 1 227 2.4E-84 T 22-04-2016 YE2554 0d66c05b5cec9091da3c598a24d26beb 227 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 225 27.203 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 YE2554 0d66c05b5cec9091da3c598a24d26beb 227 PANTHER PTHR34933 1 227 2.4E-84 T 22-04-2016 YE2554 0d66c05b5cec9091da3c598a24d26beb 227 Pfam PF02107 Flagellar L-ring protein 43 226 3.8E-61 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 YE2554 0d66c05b5cec9091da3c598a24d26beb 227 PRINTS PR01008 Flagellar L-ring protein signature 204 218 1.5E-35 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 YE2554 0d66c05b5cec9091da3c598a24d26beb 227 PRINTS PR01008 Flagellar L-ring protein signature 167 183 1.5E-35 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 YE2554 0d66c05b5cec9091da3c598a24d26beb 227 PRINTS PR01008 Flagellar L-ring protein signature 141 156 1.5E-35 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 YE2554 0d66c05b5cec9091da3c598a24d26beb 227 PRINTS PR01008 Flagellar L-ring protein signature 188 202 1.5E-35 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 YE2554 0d66c05b5cec9091da3c598a24d26beb 227 PRINTS PR01008 Flagellar L-ring protein signature 68 80 1.5E-35 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 YE2393 930abffa4f1cd6f615fbf28e99185b1c 205 PANTHER PTHR33796 2 203 9.0E-83 T 22-04-2016 YE2393 930abffa4f1cd6f615fbf28e99185b1c 205 Gene3D G3DSA:1.10.150.20 67 138 7.7E-33 T 22-04-2016 YE2393 930abffa4f1cd6f615fbf28e99185b1c 205 Pfam PF07499 RuvA, C-terminal domain 161 203 1.1E-13 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 YE2393 930abffa4f1cd6f615fbf28e99185b1c 205 SUPERFAMILY SSF50249 2 63 1.26E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE2393 930abffa4f1cd6f615fbf28e99185b1c 205 SUPERFAMILY SSF46929 160 203 5.36E-10 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 YE2393 930abffa4f1cd6f615fbf28e99185b1c 205 Pfam PF14520 Helix-hairpin-helix domain 72 130 4.8E-18 T 22-04-2016 YE2393 930abffa4f1cd6f615fbf28e99185b1c 205 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 205 32.464 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 YE2393 930abffa4f1cd6f615fbf28e99185b1c 205 Pfam PF01330 RuvA N terminal domain 2 62 3.1E-18 T 22-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 YE2393 930abffa4f1cd6f615fbf28e99185b1c 205 SMART SM00278 73 92 0.054 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 YE2393 930abffa4f1cd6f615fbf28e99185b1c 205 SMART SM00278 108 127 0.15 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 YE2393 930abffa4f1cd6f615fbf28e99185b1c 205 Gene3D G3DSA:2.40.50.140 2 64 6.0E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE2393 930abffa4f1cd6f615fbf28e99185b1c 205 SUPERFAMILY SSF47781 66 136 4.45E-23 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 YE2393 930abffa4f1cd6f615fbf28e99185b1c 205 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 205 1.1E-66 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 YE2393 930abffa4f1cd6f615fbf28e99185b1c 205 Gene3D G3DSA:1.10.8.10 160 202 1.1E-20 T 22-04-2016 YE0286 c3804ac9322810fbd9d7c580d9311931 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1266 1340 3.3E-27 T 22-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YE0286 c3804ac9322810fbd9d7c580d9311931 1342 Gene3D G3DSA:2.40.50.100 716 792 2.2E-30 T 22-04-2016 YE0286 c3804ac9322810fbd9d7c580d9311931 1342 Gene3D G3DSA:3.90.1110.10 153 230 5.3E-65 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YE0286 c3804ac9322810fbd9d7c580d9311931 1342 Gene3D G3DSA:3.90.1110.10 346 444 5.3E-65 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YE0286 c3804ac9322810fbd9d7c580d9311931 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1264 2.2E-160 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YE0286 c3804ac9322810fbd9d7c580d9311931 1342 Gene3D G3DSA:3.90.1100.10 20 151 1.4E-147 T 22-04-2016 YE0286 c3804ac9322810fbd9d7c580d9311931 1342 Gene3D G3DSA:3.90.1100.10 445 591 1.4E-147 T 22-04-2016 YE0286 c3804ac9322810fbd9d7c580d9311931 1342 Gene3D G3DSA:3.90.1100.10 659 713 1.4E-147 T 22-04-2016 YE0286 c3804ac9322810fbd9d7c580d9311931 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1342 12.319 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YE0286 c3804ac9322810fbd9d7c580d9311931 1342 PANTHER PTHR20856:SF20 5 231 0.0 T 22-04-2016 YE0286 c3804ac9322810fbd9d7c580d9311931 1342 PANTHER PTHR20856:SF20 1034 1128 0.0 T 22-04-2016 YE0286 c3804ac9322810fbd9d7c580d9311931 1342 PANTHER PTHR20856:SF20 340 725 0.0 T 22-04-2016 YE0286 c3804ac9322810fbd9d7c580d9311931 1342 PANTHER PTHR20856:SF20 1182 1342 0.0 T 22-04-2016 YE0286 c3804ac9322810fbd9d7c580d9311931 1342 PANTHER PTHR20856:SF20 743 930 0.0 T 22-04-2016 YE0286 c3804ac9322810fbd9d7c580d9311931 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 2.0E-30 T 22-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YE0286 c3804ac9322810fbd9d7c580d9311931 1342 Gene3D G3DSA:2.30.150.10 592 656 3.4E-31 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YE0286 c3804ac9322810fbd9d7c580d9311931 1342 SUPERFAMILY SSF64484 343 939 0.0 T 22-04-2016 YE0286 c3804ac9322810fbd9d7c580d9311931 1342 SUPERFAMILY SSF64484 11 226 0.0 T 22-04-2016 YE0286 c3804ac9322810fbd9d7c580d9311931 1342 SUPERFAMILY SSF64484 1039 1340 0.0 T 22-04-2016 YE0286 c3804ac9322810fbd9d7c580d9311931 1342 PANTHER PTHR20856 5 231 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YE0286 c3804ac9322810fbd9d7c580d9311931 1342 PANTHER PTHR20856 1034 1128 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YE0286 c3804ac9322810fbd9d7c580d9311931 1342 PANTHER PTHR20856 340 725 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YE0286 c3804ac9322810fbd9d7c580d9311931 1342 PANTHER PTHR20856 1182 1342 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YE0286 c3804ac9322810fbd9d7c580d9311931 1342 PANTHER PTHR20856 743 930 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YE0286 c3804ac9322810fbd9d7c580d9311931 1342 Pfam PF04563 RNA polymerase beta subunit 26 500 2.5E-58 T 22-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YE0286 c3804ac9322810fbd9d7c580d9311931 1342 Gene3D G3DSA:2.40.50.150 1045 1059 2.4E-57 T 22-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YE0286 c3804ac9322810fbd9d7c580d9311931 1342 Gene3D G3DSA:2.40.50.150 828 937 2.4E-57 T 22-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YE0286 c3804ac9322810fbd9d7c580d9311931 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 5.7E-27 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YE0286 c3804ac9322810fbd9d7c580d9311931 1342 Gene3D G3DSA:2.40.270.10 1060 1242 7.8E-90 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YE0286 c3804ac9322810fbd9d7c580d9311931 1342 Gene3D G3DSA:2.40.270.10 793 820 7.8E-90 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YE0286 c3804ac9322810fbd9d7c580d9311931 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1339 0.0 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YE0286 c3804ac9322810fbd9d7c580d9311931 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 22-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YE0286 c3804ac9322810fbd9d7c580d9311931 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 240 1.4E-7 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YE0286 c3804ac9322810fbd9d7c580d9311931 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 336 454 2.5E-16 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YE2255 e0b37acd204b43b6f4c0dbbda0d9da2b 128 Pfam PF00293 NUDIX domain 4 122 7.2E-18 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 YE2255 e0b37acd204b43b6f4c0dbbda0d9da2b 128 Gene3D G3DSA:3.90.79.10 3 127 3.1E-31 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YE2255 e0b37acd204b43b6f4c0dbbda0d9da2b 128 ProSitePatterns PS00893 Nudix box signature. 35 56 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 YE2255 e0b37acd204b43b6f4c0dbbda0d9da2b 128 PANTHER PTHR22769 1 128 4.1E-37 T 22-04-2016 YE2255 e0b37acd204b43b6f4c0dbbda0d9da2b 128 PANTHER PTHR22769:SF35 1 128 4.1E-37 T 22-04-2016 YE2255 e0b37acd204b43b6f4c0dbbda0d9da2b 128 SUPERFAMILY SSF55811 3 125 6.23E-33 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YE2255 e0b37acd204b43b6f4c0dbbda0d9da2b 128 PRINTS PR00502 NUDIX hydrolase family signature 30 44 1.8E-6 T 22-04-2016 IPR020476 NUDIX hydrolase YE2255 e0b37acd204b43b6f4c0dbbda0d9da2b 128 PRINTS PR00502 NUDIX hydrolase family signature 44 59 1.8E-6 T 22-04-2016 IPR020476 NUDIX hydrolase YE2117 928541dae30f3ae7ff1368e74518ec63 354 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 57 342 4.0E-135 T 22-04-2016 IPR006507 Uncharacterised protein family UPF0283 YE2117 928541dae30f3ae7ff1368e74518ec63 354 PANTHER PTHR39342 1 354 5.6E-148 T 22-04-2016 YE2117 928541dae30f3ae7ff1368e74518ec63 354 Hamap MF_01085 UPF0283 membrane protein YcjF [ycjF]. 4 348 39.407 T 22-04-2016 IPR006507 Uncharacterised protein family UPF0283 YE2117 928541dae30f3ae7ff1368e74518ec63 354 Pfam PF05128 Domain of unknown function (DUF697) 183 342 4.5E-55 T 22-04-2016 IPR021147 Protein of unknown function DUF697 YE2117 928541dae30f3ae7ff1368e74518ec63 354 PANTHER PTHR39342:SF1 1 354 5.6E-148 T 22-04-2016 YE4134 ecab7b4e04442282c62b66ca73fa6588 323 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 135 146 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YE4134 ecab7b4e04442282c62b66ca73fa6588 323 PIRSF PIRSF036298 1 315 9.2E-167 T 22-04-2016 IPR014603 Formate dehydrogenase iron-sulphur subunit GO:0015944|GO:0045333|GO:0051539 YE4134 ecab7b4e04442282c62b66ca73fa6588 323 TIGRFAM TIGR01582 FDH-beta: formate dehydrogenase, beta subunit 7 292 1.3E-141 T 22-04-2016 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria GO:0015944|GO:0016021|GO:0045333|GO:0051539 YE4134 ecab7b4e04442282c62b66ca73fa6588 323 Gene3D G3DSA:1.20.5.480 249 295 6.6E-27 T 22-04-2016 YE4134 ecab7b4e04442282c62b66ca73fa6588 323 Pfam PF09163 Formate dehydrogenase N, transmembrane 248 290 1.9E-22 T 22-04-2016 IPR015246 Formate dehydrogenase, transmembrane YE4134 ecab7b4e04442282c62b66ca73fa6588 323 Gene3D G3DSA:3.30.70.20 106 140 2.7E-11 T 22-04-2016 YE4134 ecab7b4e04442282c62b66ca73fa6588 323 PANTHER PTHR11938 1 206 1.1E-153 T 22-04-2016 YE4134 ecab7b4e04442282c62b66ca73fa6588 323 SUPERFAMILY SSF54862 28 275 5.76E-70 T 22-04-2016 YE4134 ecab7b4e04442282c62b66ca73fa6588 323 PANTHER PTHR11938:SF84 1 206 1.1E-153 T 22-04-2016 YE4134 ecab7b4e04442282c62b66ca73fa6588 323 Gene3D G3DSA:3.30.70.20 175 229 9.1E-37 T 22-04-2016 YE4134 ecab7b4e04442282c62b66ca73fa6588 323 Gene3D G3DSA:3.30.70.20 29 105 9.1E-37 T 22-04-2016 YE4134 ecab7b4e04442282c62b66ca73fa6588 323 Gene3D G3DSA:3.30.70.20 141 174 2.2E-15 T 22-04-2016 YE4134 ecab7b4e04442282c62b66ca73fa6588 323 Pfam PF13247 4Fe-4S dicluster domain 94 190 7.4E-25 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YE3854 272690f55b6a6421a35be36ce0c684ad 69 PANTHER PTHR34977 1 69 1.8E-17 T 22-04-2016 YE3854 272690f55b6a6421a35be36ce0c684ad 69 PIRSF PIRSF039008 1 66 7.8E-33 T 22-04-2016 IPR026042 Stress response protein YjbJ YE3854 272690f55b6a6421a35be36ce0c684ad 69 Pfam PF05532 CsbD-like 4 56 7.6E-23 T 22-04-2016 IPR008462 CsbD-like YE3854 272690f55b6a6421a35be36ce0c684ad 69 Gene3D G3DSA:1.10.1470.10 1 67 1.7E-32 T 22-04-2016 IPR008462 CsbD-like YE3854 272690f55b6a6421a35be36ce0c684ad 69 SUPERFAMILY SSF69047 1 69 9.42E-28 T 22-04-2016 IPR008462 CsbD-like YE4026 960e11ee863207bc854d4f7dcb548ba0 337 Gene3D G3DSA:3.40.50.720 3 151 7.4E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain YE4026 960e11ee863207bc854d4f7dcb548ba0 337 Hamap MF_01671 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase [iolG]. 1 336 50.52 T 22-04-2016 IPR023794 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase GO:0019310|GO:0050112|GO:0055114 KEGG: 00521+1.1.1.18|KEGG: 00562+1.1.1.18|MetaCyc: PWY-5940|MetaCyc: PWY-7237|MetaCyc: PWY-7241 YE4026 960e11ee863207bc854d4f7dcb548ba0 337 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 125 2.3E-26 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 YE4026 960e11ee863207bc854d4f7dcb548ba0 337 PANTHER PTHR22604:SF103 3 336 7.6E-164 T 22-04-2016 YE4026 960e11ee863207bc854d4f7dcb548ba0 337 SUPERFAMILY SSF55347 133 293 1.7E-17 T 22-04-2016 YE4026 960e11ee863207bc854d4f7dcb548ba0 337 PANTHER PTHR22604 3 336 7.6E-164 T 22-04-2016 YE4026 960e11ee863207bc854d4f7dcb548ba0 337 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 137 239 2.1E-10 T 22-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 YE4026 960e11ee863207bc854d4f7dcb548ba0 337 SUPERFAMILY SSF51735 3 154 8.62E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain YE4026 960e11ee863207bc854d4f7dcb548ba0 337 Gene3D G3DSA:3.30.360.10 152 260 9.1E-42 T 22-04-2016 YE1467 efb01d902a7ae395aaee09c528eaed22 328 Gene3D G3DSA:3.40.50.300 1 237 5.2E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1467 efb01d902a7ae395aaee09c528eaed22 328 Pfam PF09383 NIL domain 254 326 1.1E-12 T 22-04-2016 IPR018449 NIL domain YE1467 efb01d902a7ae395aaee09c528eaed22 328 SUPERFAMILY SSF52540 1 237 4.09E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1467 efb01d902a7ae395aaee09c528eaed22 328 PANTHER PTHR24220:SF186 3 250 1.8E-144 T 22-04-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 YE1467 efb01d902a7ae395aaee09c528eaed22 328 SMART SM00382 30 226 1.4E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain YE1467 efb01d902a7ae395aaee09c528eaed22 328 Gene3D G3DSA:3.30.70.260 250 328 1.7E-12 T 22-04-2016 YE1467 efb01d902a7ae395aaee09c528eaed22 328 PANTHER PTHR24220 3 250 1.8E-144 T 22-04-2016 YE1467 efb01d902a7ae395aaee09c528eaed22 328 SMART SM00930 251 328 5.1E-15 T 22-04-2016 IPR018449 NIL domain YE1467 efb01d902a7ae395aaee09c528eaed22 328 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE1467 efb01d902a7ae395aaee09c528eaed22 328 SUPERFAMILY SSF55021 251 328 2.75E-11 T 22-04-2016 YE1467 efb01d902a7ae395aaee09c528eaed22 328 Pfam PF00005 ABC transporter 21 169 3.2E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE3337 ab323cd2ab6ad17186cd130f4dba9433 214 Pfam PF01323 DSBA-like thioredoxin domain 10 185 3.1E-6 T 22-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 YE3337 ab323cd2ab6ad17186cd130f4dba9433 214 Gene3D G3DSA:1.10.472.60 48 154 1.5E-32 T 22-04-2016 IPR023169 UPF0413, central domain YE3337 ab323cd2ab6ad17186cd130f4dba9433 214 SUPERFAMILY SSF52833 4 186 1.24E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold YE2261 587750a32ccc67add2c21236ebf7c46b 338 SMART SM00870 5 323 6.1E-138 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 YE2261 587750a32ccc67add2c21236ebf7c46b 338 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 3 335 5.3E-130 T 22-04-2016 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 YE2261 587750a32ccc67add2c21236ebf7c46b 338 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 4.5E-17 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 YE2261 587750a32ccc67add2c21236ebf7c46b 338 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 4.5E-17 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 YE2261 587750a32ccc67add2c21236ebf7c46b 338 PRINTS PR00139 Asparaginase/glutaminase family signature 260 278 4.5E-17 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 YE2261 587750a32ccc67add2c21236ebf7c46b 338 PANTHER PTHR11707 1 336 1.0E-262 T 22-04-2016 YE2261 587750a32ccc67add2c21236ebf7c46b 338 PANTHER PTHR11707:SF31 1 336 1.0E-262 T 22-04-2016 YE2261 587750a32ccc67add2c21236ebf7c46b 338 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 22-04-2016 IPR027475 Asparaginase/glutaminase, active site 2 YE2261 587750a32ccc67add2c21236ebf7c46b 338 SUPERFAMILY SSF53774 3 335 2.22E-111 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 YE2261 587750a32ccc67add2c21236ebf7c46b 338 Pfam PF00710 Asparaginase, N-terminal 6 186 2.0E-63 T 22-04-2016 IPR027474 L-asparaginase, N-terminal YE2261 587750a32ccc67add2c21236ebf7c46b 338 Gene3D G3DSA:3.40.50.1170 5 190 1.1E-75 T 22-04-2016 IPR027474 L-asparaginase, N-terminal YE2261 587750a32ccc67add2c21236ebf7c46b 338 PIRSF PIRSF001220 1 334 1.3E-98 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 YE2261 587750a32ccc67add2c21236ebf7c46b 338 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 22-04-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 YE2261 587750a32ccc67add2c21236ebf7c46b 338 Gene3D G3DSA:3.40.50.40 211 335 9.2E-52 T 22-04-2016 IPR027473 L-asparaginase, C-terminal domain YE2261 587750a32ccc67add2c21236ebf7c46b 338 PIRSF PIRSF500176 2 332 1.4E-113 T 22-04-2016 YE3882 bd7ece280aa919c382b0c9111ca072a8 309 Pfam PF04204 Homoserine O-succinyltransferase 2 299 2.5E-131 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 YE3882 bd7ece280aa919c382b0c9111ca072a8 309 PIRSF PIRSF000450 1 308 3.4E-146 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 YE3882 bd7ece280aa919c382b0c9111ca072a8 309 Gene3D G3DSA:3.40.50.880 34 301 2.9E-119 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YE3882 bd7ece280aa919c382b0c9111ca072a8 309 PANTHER PTHR20919:SF0 2 309 4.8E-164 T 22-04-2016 YE3882 bd7ece280aa919c382b0c9111ca072a8 309 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 1.0E-143 T 22-04-2016 YE3882 bd7ece280aa919c382b0c9111ca072a8 309 SUPERFAMILY SSF52317 17 297 1.35E-99 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YE3882 bd7ece280aa919c382b0c9111ca072a8 309 PANTHER PTHR20919 2 309 4.8E-164 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 YE3882 bd7ece280aa919c382b0c9111ca072a8 309 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 302 4.6E-157 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 YE3882 bd7ece280aa919c382b0c9111ca072a8 309 Hamap MF_00295 Homoserine O-succinyltransferase [metA]. 1 301 52.0 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 YE1778 acec38c5b3f0ea879db8f02227129697 514 SUPERFAMILY SSF54631 285 419 2.02E-23 T 22-04-2016 YE1778 acec38c5b3f0ea879db8f02227129697 514 PANTHER PTHR22777:SF15 1 514 0.0 T 22-04-2016 YE1778 acec38c5b3f0ea879db8f02227129697 514 SUPERFAMILY SSF56176 430 513 5.45E-18 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 YE1778 acec38c5b3f0ea879db8f02227129697 514 Pfam PF00571 CBS domain 366 416 4.0E-5 T 22-04-2016 IPR000644 CBS domain YE1778 acec38c5b3f0ea879db8f02227129697 514 SMART SM01091 428 509 6.1E-22 T 22-04-2016 IPR005170 Transporter-associated domain YE1778 acec38c5b3f0ea879db8f02227129697 514 Gene3D G3DSA:3.30.465.10 411 508 1.9E-20 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 YE1778 acec38c5b3f0ea879db8f02227129697 514 Pfam PF03741 Integral membrane protein TerC family 14 203 2.2E-48 T 22-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 YE1778 acec38c5b3f0ea879db8f02227129697 514 Gene3D G3DSA:3.10.580.10 284 410 3.9E-15 T 22-04-2016 YE1778 acec38c5b3f0ea879db8f02227129697 514 PANTHER PTHR22777 1 514 0.0 T 22-04-2016 YE1778 acec38c5b3f0ea879db8f02227129697 514 Pfam PF03471 Transporter associated domain 431 508 1.6E-17 T 22-04-2016 IPR005170 Transporter-associated domain YE4029 744b81882bc6302f585af3bc703dc5c7 277 SUPERFAMILY SSF53697 117 270 6.27E-27 T 22-04-2016 YE4029 744b81882bc6302f585af3bc703dc5c7 277 Gene3D G3DSA:1.10.10.10 10 84 5.2E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE4029 744b81882bc6302f585af3bc703dc5c7 277 Pfam PF01418 Helix-turn-helix domain, rpiR family 10 79 3.5E-13 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 YE4029 744b81882bc6302f585af3bc703dc5c7 277 PANTHER PTHR30514:SF3 6 266 1.6E-86 T 22-04-2016 YE4029 744b81882bc6302f585af3bc703dc5c7 277 Pfam PF01380 SIS domain 142 268 9.7E-25 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 YE4029 744b81882bc6302f585af3bc703dc5c7 277 SUPERFAMILY SSF46689 11 85 2.69E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE4029 744b81882bc6302f585af3bc703dc5c7 277 Gene3D G3DSA:3.40.50.10490 117 273 2.4E-28 T 22-04-2016 YE4029 744b81882bc6302f585af3bc703dc5c7 277 PANTHER PTHR30514 6 266 1.6E-86 T 22-04-2016 YE0140 60e0ea6b618e6a95eaaa5d193a14bcc5 287 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 93 101 - T 22-04-2016 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YE0140 60e0ea6b618e6a95eaaa5d193a14bcc5 287 SUPERFAMILY SSF53681 131 283 8.07E-34 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YE0140 60e0ea6b618e6a95eaaa5d193a14bcc5 287 PANTHER PTHR21198:SF2 19 287 1.1E-114 T 22-04-2016 YE0140 60e0ea6b618e6a95eaaa5d193a14bcc5 287 SUPERFAMILY SSF53681 29 129 3.86E-31 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YE0140 60e0ea6b618e6a95eaaa5d193a14bcc5 287 TIGRFAM TIGR00067 glut_race: glutamate racemase 29 272 1.0E-84 T 22-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YE0140 60e0ea6b618e6a95eaaa5d193a14bcc5 287 PANTHER PTHR21198 19 287 1.1E-114 T 22-04-2016 YE0140 60e0ea6b618e6a95eaaa5d193a14bcc5 287 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 204 214 - T 22-04-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YE0140 60e0ea6b618e6a95eaaa5d193a14bcc5 287 Hamap MF_00258 Glutamate racemase [murI]. 26 278 34.376 T 22-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YE0140 60e0ea6b618e6a95eaaa5d193a14bcc5 287 Gene3D G3DSA:3.40.50.1860 29 195 8.3E-49 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YE0140 60e0ea6b618e6a95eaaa5d193a14bcc5 287 Pfam PF01177 Asp/Glu/Hydantoin racemase 31 239 4.6E-27 T 22-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YE4090 2b1328ddcf2ad9f458efcf1719250f19 563 PANTHER PTHR30443:SF3 1 557 0.0 T 22-04-2016 YE4090 2b1328ddcf2ad9f458efcf1719250f19 563 Pfam PF00884 Sulfatase 250 538 3.9E-41 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 YE4090 2b1328ddcf2ad9f458efcf1719250f19 563 PANTHER PTHR30443 1 557 0.0 T 22-04-2016 YE4090 2b1328ddcf2ad9f458efcf1719250f19 563 Pfam PF08019 Domain of unknown function (DUF1705) 56 185 5.4E-18 T 22-04-2016 IPR012549 Domain of unknown function DUF1705 GO:0016021 YE4090 2b1328ddcf2ad9f458efcf1719250f19 563 SUPERFAMILY SSF53649 431 542 2.06E-16 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 YE4090 2b1328ddcf2ad9f458efcf1719250f19 563 SUPERFAMILY SSF53649 250 386 2.06E-16 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 YE4090 2b1328ddcf2ad9f458efcf1719250f19 563 Gene3D G3DSA:3.40.720.10 250 541 1.9E-11 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 YE2825 5c1a7eec7f76f955da834c550e27e4fe 219 SMART SM00382 30 217 6.5E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain YE2825 5c1a7eec7f76f955da834c550e27e4fe 219 Gene3D G3DSA:3.40.50.300 1 218 2.1E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2825 5c1a7eec7f76f955da834c550e27e4fe 219 SUPERFAMILY SSF52540 1 218 1.36E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2825 5c1a7eec7f76f955da834c550e27e4fe 219 PANTHER PTHR24220:SF539 3 218 6.2E-120 T 22-04-2016 YE2825 5c1a7eec7f76f955da834c550e27e4fe 219 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE2825 5c1a7eec7f76f955da834c550e27e4fe 219 Pfam PF00005 ABC transporter 21 169 1.1E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE2825 5c1a7eec7f76f955da834c550e27e4fe 219 PANTHER PTHR24220 3 218 6.2E-120 T 22-04-2016 YE1519 25ddc8d907d8c6cdf9a50a3e27ba432a 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.17 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 YE1519 25ddc8d907d8c6cdf9a50a3e27ba432a 72 PANTHER PTHR33370 1 72 1.5E-49 T 22-04-2016 YE1519 25ddc8d907d8c6cdf9a50a3e27ba432a 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 2.8E-27 T 22-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 YE1519 25ddc8d907d8c6cdf9a50a3e27ba432a 72 Gene3D G3DSA:2.40.50.140 1 71 2.9E-38 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE1519 25ddc8d907d8c6cdf9a50a3e27ba432a 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 1.3E-38 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 YE1519 25ddc8d907d8c6cdf9a50a3e27ba432a 72 SUPERFAMILY SSF50249 1 70 1.18E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE1519 25ddc8d907d8c6cdf9a50a3e27ba432a 72 SMART SM00316 4 72 4.3E-7 T 22-04-2016 IPR022967 RNA-binding domain, S1 YE0732 95eab6a142180d594ede4d5f5575c027 665 PANTHER PTHR30472 249 665 1.7E-196 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 YE0732 95eab6a142180d594ede4d5f5575c027 665 PANTHER PTHR30472:SF16 249 665 1.7E-196 T 22-04-2016 YE0732 95eab6a142180d594ede4d5f5575c027 665 Pfam PF01032 FecCD transport family 20 328 5.9E-66 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 YE0732 95eab6a142180d594ede4d5f5575c027 665 Pfam PF01032 FecCD transport family 368 662 6.7E-72 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 YE0732 95eab6a142180d594ede4d5f5575c027 665 Gene3D G3DSA:1.10.3470.10 348 664 3.6E-81 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YE0732 95eab6a142180d594ede4d5f5575c027 665 SUPERFAMILY SSF81345 8 330 4.32E-60 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YE0732 95eab6a142180d594ede4d5f5575c027 665 SUPERFAMILY SSF81345 351 662 7.59E-70 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YE0732 95eab6a142180d594ede4d5f5575c027 665 Gene3D G3DSA:1.10.3470.10 10 331 6.4E-73 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YE1604 cf2760d7c64bf7354f8c80d9fff442e8 379 Pfam PF01757 Acyltransferase family 10 357 3.8E-30 T 22-04-2016 IPR002656 Acyltransferase 3 GO:0016747 YE1604 cf2760d7c64bf7354f8c80d9fff442e8 379 PANTHER PTHR36927 5 374 6.2E-46 T 22-04-2016 YE0302 f611a31dff9eb0e90484e9b22f1eae96 431 SUPERFAMILY SSF51246 329 424 4.45E-34 T 22-04-2016 IPR011054 Rudiment single hybrid motif YE0302 f611a31dff9eb0e90484e9b22f1eae96 431 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 422 2.2E-29 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 YE0302 f611a31dff9eb0e90484e9b22f1eae96 431 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 1.7E-83 T 22-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 YE0302 f611a31dff9eb0e90484e9b22f1eae96 431 Gene3D G3DSA:3.30.470.20 191 328 7.4E-63 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 YE0302 f611a31dff9eb0e90484e9b22f1eae96 431 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 22-04-2016 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 YE0302 f611a31dff9eb0e90484e9b22f1eae96 431 SUPERFAMILY SSF52440 1 103 6.62E-36 T 22-04-2016 IPR016185 Pre-ATP-grasp domain YE0302 f611a31dff9eb0e90484e9b22f1eae96 431 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 5.3E-34 T 22-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 YE0302 f611a31dff9eb0e90484e9b22f1eae96 431 SMART SM01209 103 296 2.2E-141 T 22-04-2016 YE0302 f611a31dff9eb0e90484e9b22f1eae96 431 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 424 2.9E-183 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 YE0302 f611a31dff9eb0e90484e9b22f1eae96 431 SUPERFAMILY SSF56059 104 323 5.13E-69 T 22-04-2016 YE0302 f611a31dff9eb0e90484e9b22f1eae96 431 PANTHER PTHR10520 1 429 3.5E-296 T 22-04-2016 YE0302 f611a31dff9eb0e90484e9b22f1eae96 431 Gene3D G3DSA:3.30.1490.20 122 190 7.1E-33 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 YE0302 f611a31dff9eb0e90484e9b22f1eae96 431 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 424 43.746 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 YE0302 f611a31dff9eb0e90484e9b22f1eae96 431 SMART SM01210 330 424 1.3E-55 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 YE0302 f611a31dff9eb0e90484e9b22f1eae96 431 Gene3D G3DSA:3.90.600.10 331 424 4.0E-36 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 YE0302 f611a31dff9eb0e90484e9b22f1eae96 431 Gene3D G3DSA:3.40.50.20 2 95 9.2E-36 T 22-04-2016 IPR016185 Pre-ATP-grasp domain YE0109 bc9a902503b826c8cd8961c411760616 72 PRINTS PR01249 Ribosomal protein L31 signature 46 64 2.0E-21 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0109 bc9a902503b826c8cd8961c411760616 72 PRINTS PR01249 Ribosomal protein L31 signature 2 19 2.0E-21 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0109 bc9a902503b826c8cd8961c411760616 72 PRINTS PR01249 Ribosomal protein L31 signature 31 46 2.0E-21 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0109 bc9a902503b826c8cd8961c411760616 72 SUPERFAMILY SSF143800 1 66 4.32E-26 T 22-04-2016 YE0109 bc9a902503b826c8cd8961c411760616 72 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 65 2.0E-32 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0109 bc9a902503b826c8cd8961c411760616 72 PANTHER PTHR33280 1 66 1.2E-36 T 22-04-2016 YE0109 bc9a902503b826c8cd8961c411760616 72 Pfam PF01197 Ribosomal protein L31 1 64 1.1E-28 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0109 bc9a902503b826c8cd8961c411760616 72 PANTHER PTHR33280:SF2 1 66 1.2E-36 T 22-04-2016 YE0109 bc9a902503b826c8cd8961c411760616 72 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 68 29.953 T 22-04-2016 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0109 bc9a902503b826c8cd8961c411760616 72 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 56 - T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE1955 a70a7d8208c2deea7e03aaac40c70f3e 128 SUPERFAMILY SSF51182 27 111 2.39E-13 T 22-04-2016 IPR011051 RmlC-like cupin domain YE1955 a70a7d8208c2deea7e03aaac40c70f3e 128 Gene3D G3DSA:2.60.120.10 29 111 1.4E-15 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YE1955 a70a7d8208c2deea7e03aaac40c70f3e 128 Pfam PF07883 Cupin domain 38 111 1.6E-6 T 22-04-2016 IPR013096 Cupin 2, conserved barrel YE3539 08394f29a48e790f40f46423a857c356 374 PANTHER PTHR30531:SF3 2 351 3.2E-97 T 22-04-2016 YE3539 08394f29a48e790f40f46423a857c356 374 PANTHER PTHR30531 2 351 3.2E-97 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YE3539 08394f29a48e790f40f46423a857c356 374 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 260 275 2.9E-32 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YE3539 08394f29a48e790f40f46423a857c356 374 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 290 311 2.9E-32 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YE3539 08394f29a48e790f40f46423a857c356 374 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 5 27 2.9E-32 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YE3539 08394f29a48e790f40f46423a857c356 374 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 196 214 2.9E-32 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YE3539 08394f29a48e790f40f46423a857c356 374 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 216 233 2.9E-32 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YE3539 08394f29a48e790f40f46423a857c356 374 TIGRFAM TIGR01404 FlhB_rel_III: type III secretion protein, YscU/HrpY family 2 338 8.3E-129 T 22-04-2016 IPR006307 Type III exporter system, secretion apparatus protein BsaZ GO:0009306|GO:0016021 YE3539 08394f29a48e790f40f46423a857c356 374 Pfam PF01312 FlhB HrpN YscU SpaS Family 3 334 2.1E-86 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YE3539 08394f29a48e790f40f46423a857c356 374 SUPERFAMILY SSF160544 232 338 1.31E-25 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal YE3539 08394f29a48e790f40f46423a857c356 374 Gene3D G3DSA:3.40.1690.10 205 340 1.3E-42 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal YE1945 e4d44dd9b29bb67c755344457a24549a 182 Pfam PF01613 Flavin reductase like domain 31 177 2.6E-29 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 YE1945 e4d44dd9b29bb67c755344457a24549a 182 PANTHER PTHR30466:SF2 7 181 6.2E-68 T 22-04-2016 YE1945 e4d44dd9b29bb67c755344457a24549a 182 SUPERFAMILY SSF50475 22 176 1.67E-43 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 YE1945 e4d44dd9b29bb67c755344457a24549a 182 Hamap MF_00833 FMN reductase (NADH) RutF [rutF]. 19 182 43.247 T 22-04-2016 IPR019917 FMN reductase (NADH) RutF GO:0008752|GO:0055114 KEGG: 00740+1.5.1.42|MetaCyc: PWY-7723 YE1945 e4d44dd9b29bb67c755344457a24549a 182 SMART SM00903 31 176 1.1E-48 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 YE1945 e4d44dd9b29bb67c755344457a24549a 182 TIGRFAM TIGR03615 RutF: pyrimidine utilization flavin reductase protein F 22 176 1.8E-80 T 22-04-2016 IPR019917 FMN reductase (NADH) RutF GO:0008752|GO:0055114 KEGG: 00740+1.5.1.42|MetaCyc: PWY-7723 YE1945 e4d44dd9b29bb67c755344457a24549a 182 PANTHER PTHR30466 7 181 6.2E-68 T 22-04-2016 YE1945 e4d44dd9b29bb67c755344457a24549a 182 Gene3D G3DSA:2.30.110.10 21 175 2.8E-50 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 YE3349 0d02151c89f1b32ef6117adff59c5e78 648 PANTHER PTHR30332 21 648 1.1E-252 T 22-04-2016 YE3349 0d02151c89f1b32ef6117adff59c5e78 648 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 38 597 2.5E-148 T 22-04-2016 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 YE3349 0d02151c89f1b32ef6117adff59c5e78 648 Pfam PF00263 Bacterial type II and III secretion system protein 423 588 8.4E-49 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 YE3349 0d02151c89f1b32ef6117adff59c5e78 648 PANTHER PTHR30332:SF3 21 648 1.1E-252 T 22-04-2016 YE3349 0d02151c89f1b32ef6117adff59c5e78 648 PRINTS PR00811 Bacterial general secretion pathway protein D signature 454 464 9.0E-36 T 22-04-2016 IPR001775 GspD/PilQ family YE3349 0d02151c89f1b32ef6117adff59c5e78 648 PRINTS PR00811 Bacterial general secretion pathway protein D signature 552 570 9.0E-36 T 22-04-2016 IPR001775 GspD/PilQ family YE3349 0d02151c89f1b32ef6117adff59c5e78 648 PRINTS PR00811 Bacterial general secretion pathway protein D signature 575 589 9.0E-36 T 22-04-2016 IPR001775 GspD/PilQ family YE3349 0d02151c89f1b32ef6117adff59c5e78 648 PRINTS PR00811 Bacterial general secretion pathway protein D signature 352 362 9.0E-36 T 22-04-2016 IPR001775 GspD/PilQ family YE3349 0d02151c89f1b32ef6117adff59c5e78 648 PRINTS PR00811 Bacterial general secretion pathway protein D signature 419 443 9.0E-36 T 22-04-2016 IPR001775 GspD/PilQ family YE3349 0d02151c89f1b32ef6117adff59c5e78 648 Pfam PF03958 Bacterial type II/III secretion system short domain 275 352 4.1E-16 T 22-04-2016 IPR005644 NolW-like YE3349 0d02151c89f1b32ef6117adff59c5e78 648 Pfam PF03958 Bacterial type II/III secretion system short domain 199 269 5.5E-9 T 22-04-2016 IPR005644 NolW-like YE3349 0d02151c89f1b32ef6117adff59c5e78 648 Pfam PF03958 Bacterial type II/III secretion system short domain 135 195 4.9E-10 T 22-04-2016 IPR005644 NolW-like YE3349 0d02151c89f1b32ef6117adff59c5e78 648 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 533 566 - T 22-04-2016 IPR004845 Type II secretion system GspD, conserved site GO:0008565 YE1233 71d006cf87db339f21822787b698c3d1 143 Pfam PF15970 HicB_like antitoxin of bacterial toxin-antitoxin system 4 83 7.0E-40 T 22-04-2016 IPR032753 HicB-like antitoxin YE2752 0fe77b165b507ceeff46a9f7dfb3196f 471 PANTHER PTHR24220:SF538 1 355 1.7E-166 T 22-04-2016 YE2752 0fe77b165b507ceeff46a9f7dfb3196f 471 SUPERFAMILY SSF52540 3 206 3.75E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2752 0fe77b165b507ceeff46a9f7dfb3196f 471 SMART SM00382 7 195 2.4E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain YE2752 0fe77b165b507ceeff46a9f7dfb3196f 471 SMART SM00382 255 458 4.7E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain YE2752 0fe77b165b507ceeff46a9f7dfb3196f 471 Gene3D G3DSA:3.40.50.300 3 208 1.3E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2752 0fe77b165b507ceeff46a9f7dfb3196f 471 Gene3D G3DSA:3.40.50.300 247 454 6.7E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2752 0fe77b165b507ceeff46a9f7dfb3196f 471 SUPERFAMILY SSF52540 246 455 1.64E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2752 0fe77b165b507ceeff46a9f7dfb3196f 471 PANTHER PTHR24220 1 355 1.7E-166 T 22-04-2016 YE2752 0fe77b165b507ceeff46a9f7dfb3196f 471 Pfam PF00005 ABC transporter 247 401 2.7E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE2752 0fe77b165b507ceeff46a9f7dfb3196f 471 Pfam PF00005 ABC transporter 2 147 2.1E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE2752 0fe77b165b507ceeff46a9f7dfb3196f 471 ProSitePatterns PS00211 ABC transporters family signature. 374 388 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE0316 a4de948b8667258620bac1e847c5e315 180 SUPERFAMILY SSF88659 93 173 7.2E-17 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE0316 a4de948b8667258620bac1e847c5e315 180 Pfam PF04542 Sigma-70 region 2 13 77 2.3E-8 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE0316 a4de948b8667258620bac1e847c5e315 180 SUPERFAMILY SSF88946 6 74 1.37E-10 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE0316 a4de948b8667258620bac1e847c5e315 180 Gene3D G3DSA:1.10.10.10 107 172 2.6E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0316 a4de948b8667258620bac1e847c5e315 180 Gene3D G3DSA:1.10.1740.10 13 102 4.5E-11 T 22-04-2016 YE0316 a4de948b8667258620bac1e847c5e315 180 Pfam PF08281 Sigma-70, region 4 115 166 7.7E-17 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE0316 a4de948b8667258620bac1e847c5e315 180 PANTHER PTHR30173 13 168 1.0E-47 T 22-04-2016 YE0316 a4de948b8667258620bac1e847c5e315 180 PANTHER PTHR30173:SF30 13 168 1.0E-47 T 22-04-2016 YE0316 a4de948b8667258620bac1e847c5e315 180 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 13 168 1.4E-22 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE0671 f9836d1d35f365302bf8dd4828c3bf00 400 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 31 386 1.8E-134 T 22-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 YE0671 f9836d1d35f365302bf8dd4828c3bf00 400 Pfam PF01098 Cell cycle protein 33 387 2.3E-123 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 YE0671 f9836d1d35f365302bf8dd4828c3bf00 400 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 345 369 - T 22-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 YE0671 f9836d1d35f365302bf8dd4828c3bf00 400 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 29 396 42.031 T 22-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 YE0671 f9836d1d35f365302bf8dd4828c3bf00 400 PANTHER PTHR30474 10 400 1.8E-191 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 YE0671 f9836d1d35f365302bf8dd4828c3bf00 400 PANTHER PTHR30474:SF2 10 400 1.8E-191 T 22-04-2016 YE3728 2ef4febb48f41277eab7991d109b86a3 117 SUPERFAMILY SSF52980 4 113 5.69E-22 T 22-04-2016 IPR011335 Restriction endonuclease type II-like YE3728 2ef4febb48f41277eab7991d109b86a3 117 PANTHER PTHR34039:SF1 1 117 3.8E-39 T 22-04-2016 YE3728 2ef4febb48f41277eab7991d109b86a3 117 Pfam PF02021 Uncharacterised protein family UPF0102 10 102 3.1E-23 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 YE3728 2ef4febb48f41277eab7991d109b86a3 117 Hamap MF_00048 UPF0102 protein YraN [yraN]. 3 115 22.772 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 YE3728 2ef4febb48f41277eab7991d109b86a3 117 Gene3D G3DSA:3.40.1350.10 10 116 2.6E-35 T 22-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 YE3728 2ef4febb48f41277eab7991d109b86a3 117 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 4 116 4.9E-40 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 YE3728 2ef4febb48f41277eab7991d109b86a3 117 PANTHER PTHR34039 1 117 3.8E-39 T 22-04-2016 YE2974 c5aadee0683146a59a7bc311f4f7451d 891 SUPERFAMILY SSF51445 338 778 3.66E-139 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YE2974 c5aadee0683146a59a7bc311f4f7451d 891 PANTHER PTHR22600 798 885 4.6E-221 T 22-04-2016 YE2974 c5aadee0683146a59a7bc311f4f7451d 891 PANTHER PTHR22600 153 398 4.6E-221 T 22-04-2016 YE2974 c5aadee0683146a59a7bc311f4f7451d 891 PANTHER PTHR22600 572 779 4.6E-221 T 22-04-2016 YE2974 c5aadee0683146a59a7bc311f4f7451d 891 PANTHER PTHR22600 421 462 4.6E-221 T 22-04-2016 YE2974 c5aadee0683146a59a7bc311f4f7451d 891 PANTHER PTHR22600 480 544 4.6E-221 T 22-04-2016 YE2974 c5aadee0683146a59a7bc311f4f7451d 891 PANTHER PTHR22600:SF12 798 885 4.6E-221 T 22-04-2016 YE2974 c5aadee0683146a59a7bc311f4f7451d 891 PANTHER PTHR22600:SF12 153 398 4.6E-221 T 22-04-2016 YE2974 c5aadee0683146a59a7bc311f4f7451d 891 PANTHER PTHR22600:SF12 572 779 4.6E-221 T 22-04-2016 YE2974 c5aadee0683146a59a7bc311f4f7451d 891 PANTHER PTHR22600:SF12 421 462 4.6E-221 T 22-04-2016 YE2974 c5aadee0683146a59a7bc311f4f7451d 891 PANTHER PTHR22600:SF12 480 544 4.6E-221 T 22-04-2016 YE2974 c5aadee0683146a59a7bc311f4f7451d 891 Gene3D G3DSA:3.20.20.80 336 838 2.6E-152 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 YE2974 c5aadee0683146a59a7bc311f4f7451d 891 Gene3D G3DSA:2.60.40.320 839 888 3.8E-29 T 22-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 YE2974 c5aadee0683146a59a7bc311f4f7451d 891 SMART SM01081 36 197 4.6E-104 T 22-04-2016 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|UniPathway: UPA00349 YE2974 c5aadee0683146a59a7bc311f4f7451d 891 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 216 334 2.9E-16 T 22-04-2016 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 YE2974 c5aadee0683146a59a7bc311f4f7451d 891 Pfam PF03174 Chitobiase/beta-hexosaminidase C-terminal domain 810 885 3.8E-32 T 22-04-2016 YE2974 c5aadee0683146a59a7bc311f4f7451d 891 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 338 769 1.0E-110 T 22-04-2016 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 YE2974 c5aadee0683146a59a7bc311f4f7451d 891 Gene3D G3DSA:2.60.40.290 29 169 6.1E-62 T 22-04-2016 IPR012291 Cellulose-binding family II/chitobiase, carbohydrate-binding domain GO:0004553|GO:0030247 YE2974 c5aadee0683146a59a7bc311f4f7451d 891 PRINTS PR00738 Glycosyl hydrolase family 20 signature 505 523 8.6E-43 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 YE2974 c5aadee0683146a59a7bc311f4f7451d 891 PRINTS PR00738 Glycosyl hydrolase family 20 signature 361 382 8.6E-43 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 YE2974 c5aadee0683146a59a7bc311f4f7451d 891 PRINTS PR00738 Glycosyl hydrolase family 20 signature 298 318 8.6E-43 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 YE2974 c5aadee0683146a59a7bc311f4f7451d 891 PRINTS PR00738 Glycosyl hydrolase family 20 signature 751 768 8.6E-43 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 YE2974 c5aadee0683146a59a7bc311f4f7451d 891 PRINTS PR00738 Glycosyl hydrolase family 20 signature 733 749 8.6E-43 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 YE2974 c5aadee0683146a59a7bc311f4f7451d 891 PRINTS PR00738 Glycosyl hydrolase family 20 signature 438 455 8.6E-43 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 YE2974 c5aadee0683146a59a7bc311f4f7451d 891 PRINTS PR00738 Glycosyl hydrolase family 20 signature 332 349 8.6E-43 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 YE2974 c5aadee0683146a59a7bc311f4f7451d 891 PRINTS PR00738 Glycosyl hydrolase family 20 signature 532 545 8.6E-43 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 YE2974 c5aadee0683146a59a7bc311f4f7451d 891 Gene3D G3DSA:3.30.379.10 212 335 3.1E-26 T 22-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like YE2974 c5aadee0683146a59a7bc311f4f7451d 891 Pfam PF03173 Putative carbohydrate binding domain 38 196 6.0E-70 T 22-04-2016 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|UniPathway: UPA00349 YE2974 c5aadee0683146a59a7bc311f4f7451d 891 SUPERFAMILY SSF55545 206 337 3.79E-28 T 22-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like YE2974 c5aadee0683146a59a7bc311f4f7451d 891 SUPERFAMILY SSF49384 29 199 7.32E-69 T 22-04-2016 IPR008965 Carbohydrate-binding domain GO:0030246 YE2974 c5aadee0683146a59a7bc311f4f7451d 891 SUPERFAMILY SSF81296 786 889 6.16E-39 T 22-04-2016 IPR014756 Immunoglobulin E-set YE0824 f904410514169ac71514fe1be3d31871 495 SUPERFAMILY SSF53067 257 490 1.17E-60 T 22-04-2016 YE0824 f904410514169ac71514fe1be3d31871 495 Gene3D G3DSA:3.30.420.40 257 490 3.6E-73 T 22-04-2016 YE0824 f904410514169ac71514fe1be3d31871 495 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 446 5.5E-47 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 YE0824 f904410514169ac71514fe1be3d31871 495 PANTHER PTHR10196 1 491 3.2E-181 T 22-04-2016 YE0824 f904410514169ac71514fe1be3d31871 495 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 252 2.4E-62 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 YE0824 f904410514169ac71514fe1be3d31871 495 Gene3D G3DSA:3.30.420.40 3 253 1.6E-79 T 22-04-2016 YE0824 f904410514169ac71514fe1be3d31871 495 PANTHER PTHR10196:SF9 1 491 3.2E-181 T 22-04-2016 YE0824 f904410514169ac71514fe1be3d31871 495 PIRSF PIRSF000538 3 493 2.6E-128 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 YE0824 f904410514169ac71514fe1be3d31871 495 SUPERFAMILY SSF53067 6 254 2.22E-75 T 22-04-2016 YE3691 37af8a6a87264406e38e67ef1800cc8a 313 TIGRFAM TIGR03814 Gln_ase: glutaminase A 20 309 2.5E-108 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 YE3691 37af8a6a87264406e38e67ef1800cc8a 313 SUPERFAMILY SSF56601 5 309 8.28E-104 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YE3691 37af8a6a87264406e38e67ef1800cc8a 313 PANTHER PTHR12544 4 311 3.5E-167 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 YE3691 37af8a6a87264406e38e67ef1800cc8a 313 Gene3D G3DSA:3.40.710.10 5 310 3.7E-111 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YE3691 37af8a6a87264406e38e67ef1800cc8a 313 PANTHER PTHR12544:SF31 4 311 3.5E-167 T 22-04-2016 YE3691 37af8a6a87264406e38e67ef1800cc8a 313 Pfam PF04960 Glutaminase 25 309 8.6E-100 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 YE3691 37af8a6a87264406e38e67ef1800cc8a 313 Hamap MF_00313 Glutaminase [glsA]. 7 309 40.964 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 YE3578 075444cc184633d5d5698dd9f20e5ae0 234 SMART SM00448 7 146 3.9E-4 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE3578 075444cc184633d5d5698dd9f20e5ae0 234 Pfam PF00196 Bacterial regulatory proteins, luxR family 174 229 1.5E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE3578 075444cc184633d5d5698dd9f20e5ae0 234 PANTHER PTHR26402 49 229 2.6E-30 T 22-04-2016 YE3578 075444cc184633d5d5698dd9f20e5ae0 234 PANTHER PTHR26402 7 33 2.6E-30 T 22-04-2016 YE3578 075444cc184633d5d5698dd9f20e5ae0 234 SMART SM00421 172 229 9.8E-16 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE3578 075444cc184633d5d5698dd9f20e5ae0 234 Gene3D G3DSA:1.10.10.10 152 231 3.5E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3578 075444cc184633d5d5698dd9f20e5ae0 234 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 189 205 4.3E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE3578 075444cc184633d5d5698dd9f20e5ae0 234 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 189 4.3E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE3578 075444cc184633d5d5698dd9f20e5ae0 234 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 205 217 4.3E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE3578 075444cc184633d5d5698dd9f20e5ae0 234 Gene3D G3DSA:3.40.50.2300 5 151 5.0E-30 T 22-04-2016 YE3578 075444cc184633d5d5698dd9f20e5ae0 234 SUPERFAMILY SSF52172 3 154 3.7E-16 T 22-04-2016 IPR011006 CheY-like superfamily YE3578 075444cc184633d5d5698dd9f20e5ae0 234 PANTHER PTHR26402:SF458 49 229 2.6E-30 T 22-04-2016 YE3578 075444cc184633d5d5698dd9f20e5ae0 234 PANTHER PTHR26402:SF458 7 33 2.6E-30 T 22-04-2016 YE3578 075444cc184633d5d5698dd9f20e5ae0 234 SUPERFAMILY SSF46894 165 232 2.93E-17 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YE3578 075444cc184633d5d5698dd9f20e5ae0 234 Pfam PF00072 Response regulator receiver domain 50 145 4.5E-9 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE1372 8740358ee3b3429be2571756f4b23478 763 Pfam PF03797 Autotransporter beta-domain 495 743 1.8E-34 T 22-04-2016 IPR005546 Autotransporter beta-domain YE1372 8740358ee3b3429be2571756f4b23478 763 Gene3D G3DSA:2.40.128.130 472 763 6.5E-70 T 22-04-2016 IPR005546 Autotransporter beta-domain YE1372 8740358ee3b3429be2571756f4b23478 763 PRINTS PR01484 Pertactin virulence factor family signature 628 645 8.0E-11 T 22-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 YE1372 8740358ee3b3429be2571756f4b23478 763 PRINTS PR01484 Pertactin virulence factor family signature 647 670 8.0E-11 T 22-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 YE1372 8740358ee3b3429be2571756f4b23478 763 PRINTS PR01484 Pertactin virulence factor family signature 743 763 8.0E-11 T 22-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 YE1372 8740358ee3b3429be2571756f4b23478 763 PRINTS PR01484 Pertactin virulence factor family signature 536 560 8.0E-11 T 22-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 YE1372 8740358ee3b3429be2571756f4b23478 763 PRINTS PR01484 Pertactin virulence factor family signature 477 495 8.0E-11 T 22-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 YE1372 8740358ee3b3429be2571756f4b23478 763 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 337 763 2.1E-56 T 22-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 YE1372 8740358ee3b3429be2571756f4b23478 763 SMART SM00869 497 750 5.5E-33 T 22-04-2016 IPR005546 Autotransporter beta-domain YE1372 8740358ee3b3429be2571756f4b23478 763 SUPERFAMILY SSF103515 476 763 2.62E-39 T 22-04-2016 IPR005546 Autotransporter beta-domain YE3969 ae06d6ba3a6a5104905cccffd2af9c52 346 Pfam PF00579 tRNA synthetases class I (W and Y) 13 297 4.6E-88 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YE3969 ae06d6ba3a6a5104905cccffd2af9c52 346 Gene3D G3DSA:1.10.240.10 218 336 7.2E-21 T 22-04-2016 YE3969 ae06d6ba3a6a5104905cccffd2af9c52 346 PANTHER PTHR10055:SF10 7 346 2.1E-192 T 22-04-2016 YE3969 ae06d6ba3a6a5104905cccffd2af9c52 346 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 15 343 43.044 T 22-04-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2 YE3969 ae06d6ba3a6a5104905cccffd2af9c52 346 SUPERFAMILY SSF52374 17 342 1.47E-99 T 22-04-2016 YE3969 ae06d6ba3a6a5104905cccffd2af9c52 346 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 24 33 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YE3969 ae06d6ba3a6a5104905cccffd2af9c52 346 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 15 342 1.1E-119 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 YE3969 ae06d6ba3a6a5104905cccffd2af9c52 346 Gene3D G3DSA:3.40.50.620 16 217 2.8E-90 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YE3969 ae06d6ba3a6a5104905cccffd2af9c52 346 PANTHER PTHR10055 7 346 2.1E-192 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 YE3969 ae06d6ba3a6a5104905cccffd2af9c52 346 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 28 44 2.0E-29 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 YE3969 ae06d6ba3a6a5104905cccffd2af9c52 346 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 154 175 2.0E-29 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 YE3969 ae06d6ba3a6a5104905cccffd2af9c52 346 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 207 217 2.0E-29 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 YE3969 ae06d6ba3a6a5104905cccffd2af9c52 346 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 78 97 2.0E-29 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 YE2967 9782b9be57dbc8549c332dd624e59601 546 SUPERFAMILY SSF53738 26 235 2.35E-52 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YE2967 9782b9be57dbc8549c332dd624e59601 546 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 180 4.3E-37 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YE2967 9782b9be57dbc8549c332dd624e59601 546 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YE2967 9782b9be57dbc8549c332dd624e59601 546 SUPERFAMILY SSF53738 209 317 1.41E-9 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YE2967 9782b9be57dbc8549c332dd624e59601 546 Gene3D G3DSA:3.40.120.10 318 441 3.0E-35 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YE2967 9782b9be57dbc8549c332dd624e59601 546 SUPERFAMILY SSF55957 432 543 7.06E-19 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YE2967 9782b9be57dbc8549c332dd624e59601 546 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 317 1.0E-19 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YE2967 9782b9be57dbc8549c332dd624e59601 546 Gene3D G3DSA:3.30.310.50 466 543 5.7E-29 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YE2967 9782b9be57dbc8549c332dd624e59601 546 Gene3D G3DSA:3.40.120.10 226 316 2.9E-45 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YE2967 9782b9be57dbc8549c332dd624e59601 546 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 485 538 2.1E-8 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YE2967 9782b9be57dbc8549c332dd624e59601 546 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 320 440 2.7E-30 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YE2967 9782b9be57dbc8549c332dd624e59601 546 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 2 543 0.0 T 22-04-2016 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|MetaCyc: PWY-7343 YE2967 9782b9be57dbc8549c332dd624e59601 546 PANTHER PTHR22573 18 543 2.4E-296 T 22-04-2016 YE2967 9782b9be57dbc8549c332dd624e59601 546 Gene3D G3DSA:3.40.120.10 30 225 4.2E-60 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YE2967 9782b9be57dbc8549c332dd624e59601 546 SUPERFAMILY SSF53738 305 446 4.71E-32 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YE2967 9782b9be57dbc8549c332dd624e59601 546 PANTHER PTHR22573:SF52 18 543 2.4E-296 T 22-04-2016 YE3007 2df0b74b442366b8f81bbc4766cf5018 237 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 34 207 5.7E-72 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 YE3007 2df0b74b442366b8f81bbc4766cf5018 237 Pfam PF03099 Biotin/lipoate A/B protein ligase family 66 163 2.5E-6 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 YE3007 2df0b74b442366b8f81bbc4766cf5018 237 SUPERFAMILY SSF55681 6 209 9.11E-69 T 22-04-2016 YE3007 2df0b74b442366b8f81bbc4766cf5018 237 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 75 90 - T 22-04-2016 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 YE3007 2df0b74b442366b8f81bbc4766cf5018 237 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 79 132 5.0E-21 T 22-04-2016 YE3007 2df0b74b442366b8f81bbc4766cf5018 237 Gene3D G3DSA:3.90.1550.10 7 207 3.0E-71 T 22-04-2016 YE3007 2df0b74b442366b8f81bbc4766cf5018 237 PIRSF PIRSF016262 5 218 5.5E-56 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 YE3007 2df0b74b442366b8f81bbc4766cf5018 237 Hamap MF_00013 Octanoyltransferase [lipB]. 9 210 36.75 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 YE3007 2df0b74b442366b8f81bbc4766cf5018 237 PANTHER PTHR10993 1 223 2.0E-81 T 22-04-2016 YE0807 ced0c423f4a082f675ef2c74e9782b5d 196 Pfam PF07883 Cupin domain 124 190 2.5E-21 T 22-04-2016 IPR013096 Cupin 2, conserved barrel YE0807 ced0c423f4a082f675ef2c74e9782b5d 196 PANTHER PTHR10245 14 196 1.6E-36 T 22-04-2016 YE0807 ced0c423f4a082f675ef2c74e9782b5d 196 PANTHER PTHR10245:SF49 14 196 1.6E-36 T 22-04-2016 YE0807 ced0c423f4a082f675ef2c74e9782b5d 196 SUPERFAMILY SSF47413 13 76 2.11E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE0807 ced0c423f4a082f675ef2c74e9782b5d 196 Gene3D G3DSA:2.60.120.10 66 193 8.3E-26 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YE0807 ced0c423f4a082f675ef2c74e9782b5d 196 SMART SM00530 18 73 9.8E-13 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YE0807 ced0c423f4a082f675ef2c74e9782b5d 196 Pfam PF13560 Helix-turn-helix domain 14 68 8.5E-12 T 22-04-2016 YE0807 ced0c423f4a082f675ef2c74e9782b5d 196 SUPERFAMILY SSF51182 81 192 1.31E-26 T 22-04-2016 IPR011051 RmlC-like cupin domain YE0807 ced0c423f4a082f675ef2c74e9782b5d 196 Gene3D G3DSA:1.10.260.40 13 65 3.4E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE3557 9082804eafe3ea5316d9fd0bcdca9dec 158 Pfam PF01464 Transglycosylase SLT domain 25 128 3.9E-20 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 YE3557 9082804eafe3ea5316d9fd0bcdca9dec 158 SUPERFAMILY SSF53955 14 139 4.56E-33 T 22-04-2016 IPR023346 Lysozyme-like domain YE3557 9082804eafe3ea5316d9fd0bcdca9dec 158 Gene3D G3DSA:1.10.530.10 24 136 3.4E-14 T 22-04-2016 YE1744 5db0e4f8d25c6b99358ad5d45283c78c 129 PANTHER PTHR39176:SF1 26 129 5.4E-19 T 22-04-2016 YE1744 5db0e4f8d25c6b99358ad5d45283c78c 129 ProDom PD498860 RC0070 97 129 0.001 T 22-04-2016 YE1744 5db0e4f8d25c6b99358ad5d45283c78c 129 PANTHER PTHR39176 26 129 5.4E-19 T 22-04-2016 YE1744 5db0e4f8d25c6b99358ad5d45283c78c 129 Pfam PF07007 Protein of unknown function (DUF1311) 26 114 2.7E-24 T 22-04-2016 IPR009739 Protein of unknown function DUF1311 YE2383 07eadff04f6da33711e639486a5e721f 494 SUPERFAMILY SSF51735 7 192 4.07E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2383 07eadff04f6da33711e639486a5e721f 494 PIRSF PIRSF000110 1 494 3.6E-183 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 YE2383 07eadff04f6da33711e639486a5e721f 494 PANTHER PTHR23429:SF0 5 492 1.8E-227 T 22-04-2016 YE2383 07eadff04f6da33711e639486a5e721f 494 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 12 492 91.04 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 YE2383 07eadff04f6da33711e639486a5e721f 494 Gene3D G3DSA:3.40.50.720 10 188 7.3E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2383 07eadff04f6da33711e639486a5e721f 494 Gene3D G3DSA:3.30.360.10 189 490 3.5E-121 T 22-04-2016 YE2383 07eadff04f6da33711e639486a5e721f 494 PANTHER PTHR23429 5 492 1.8E-227 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 YE2383 07eadff04f6da33711e639486a5e721f 494 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 145 158 7.02E-48 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 YE2383 07eadff04f6da33711e639486a5e721f 494 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 169 197 7.02E-48 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 YE2383 07eadff04f6da33711e639486a5e721f 494 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 239 255 7.02E-48 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 YE2383 07eadff04f6da33711e639486a5e721f 494 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 221 238 7.02E-48 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 YE2383 07eadff04f6da33711e639486a5e721f 494 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 330 356 7.02E-48 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 YE2383 07eadff04f6da33711e639486a5e721f 494 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 179 185 - T 22-04-2016 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 YE2383 07eadff04f6da33711e639486a5e721f 494 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 16 189 3.0E-59 T 22-04-2016 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 YE2383 07eadff04f6da33711e639486a5e721f 494 SUPERFAMILY SSF55347 179 491 8.83E-113 T 22-04-2016 YE2383 07eadff04f6da33711e639486a5e721f 494 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 12 492 6.3E-200 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 YE2383 07eadff04f6da33711e639486a5e721f 494 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 191 491 3.4E-115 T 22-04-2016 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 YE0115 08939de4420e45780f72e9fc0bf6de9a 400 Gene3D G3DSA:3.90.176.10 216 384 1.6E-11 T 22-04-2016 YE0115 08939de4420e45780f72e9fc0bf6de9a 400 Gene3D G3DSA:1.20.58.430 124 215 8.9E-4 T 22-04-2016 IPR023220 Type IV secretion system, VirB5-domain YE0115 08939de4420e45780f72e9fc0bf6de9a 400 Pfam PF01129 NAD:arginine ADP-ribosyltransferase 295 392 5.1E-7 T 22-04-2016 IPR000768 NAD:arginine ADP-ribosyltransferase, ART GO:0003956|GO:0006471 YE0115 08939de4420e45780f72e9fc0bf6de9a 400 SUPERFAMILY SSF56399 226 389 5.28E-12 T 22-04-2016 YE3710 21c98f34556c8f84aef7019f918ae39b 264 SMART SM00345 13 72 3.3E-25 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YE3710 21c98f34556c8f84aef7019f918ae39b 264 PANTHER PTHR11751:SF421 1 112 1.1E-59 T 22-04-2016 YE3710 21c98f34556c8f84aef7019f918ae39b 264 SUPERFAMILY SSF48008 94 227 8.37E-20 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal YE3710 21c98f34556c8f84aef7019f918ae39b 264 SUPERFAMILY SSF46785 2 76 2.27E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3710 21c98f34556c8f84aef7019f918ae39b 264 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 1.4E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YE3710 21c98f34556c8f84aef7019f918ae39b 264 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 1.4E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YE3710 21c98f34556c8f84aef7019f918ae39b 264 Gene3D G3DSA:1.20.120.530 96 228 7.5E-21 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal YE3710 21c98f34556c8f84aef7019f918ae39b 264 PANTHER PTHR11751 1 112 1.1E-59 T 22-04-2016 YE3710 21c98f34556c8f84aef7019f918ae39b 264 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 72 1.2E-22 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YE3710 21c98f34556c8f84aef7019f918ae39b 264 Gene3D G3DSA:1.10.10.10 3 79 5.0E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3710 21c98f34556c8f84aef7019f918ae39b 264 Pfam PF07729 FCD domain 96 219 5.8E-17 T 22-04-2016 IPR011711 GntR, C-terminal YE3710 21c98f34556c8f84aef7019f918ae39b 264 SMART SM00895 96 220 2.8E-14 T 22-04-2016 IPR011711 GntR, C-terminal YE0570 bf3aa0852abbd948f3eb682909d59f38 265 SUPERFAMILY SSF51569 13 252 1.05E-80 T 22-04-2016 YE0570 bf3aa0852abbd948f3eb682909d59f38 265 PANTHER PTHR10889:SF3 8 263 3.5E-121 T 22-04-2016 YE0570 bf3aa0852abbd948f3eb682909d59f38 265 Gene3D G3DSA:3.20.20.70 14 261 1.9E-91 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YE0570 bf3aa0852abbd948f3eb682909d59f38 265 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 7 265 52.27 T 22-04-2016 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 YE0570 bf3aa0852abbd948f3eb682909d59f38 265 PANTHER PTHR10889 8 263 3.5E-121 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 YE0570 bf3aa0852abbd948f3eb682909d59f38 265 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 17 238 5.9E-81 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 YE0570 bf3aa0852abbd948f3eb682909d59f38 265 Pfam PF01791 DeoC/LacD family aldolase 18 246 1.8E-46 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 YE0570 bf3aa0852abbd948f3eb682909d59f38 265 SMART SM01133 16 252 3.2E-77 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 YE0570 bf3aa0852abbd948f3eb682909d59f38 265 PIRSF PIRSF001357 11 261 3.3E-79 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 YE0003 500a30b54d55ba31c115278d847dcb8b 330 TIGRFAM TIGR00669 asnA: aspartate--ammonia ligase 1 330 1.5E-185 T 22-04-2016 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1|UniPathway: UPA00134 YE0003 500a30b54d55ba31c115278d847dcb8b 330 Pfam PF03590 Aspartate-ammonia ligase 9 244 5.9E-96 T 22-04-2016 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1|UniPathway: UPA00134 YE0003 500a30b54d55ba31c115278d847dcb8b 330 PANTHER PTHR30073 1 330 2.4E-203 T 22-04-2016 YE0003 500a30b54d55ba31c115278d847dcb8b 330 SUPERFAMILY SSF55681 5 328 4.31E-98 T 22-04-2016 YE0003 500a30b54d55ba31c115278d847dcb8b 330 PANTHER PTHR30073:SF5 1 330 2.4E-203 T 22-04-2016 YE0003 500a30b54d55ba31c115278d847dcb8b 330 PIRSF PIRSF001555 1 329 8.6E-157 T 22-04-2016 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1|UniPathway: UPA00134 YE0003 500a30b54d55ba31c115278d847dcb8b 330 Hamap MF_00555 Aspartate--ammonia ligase [asnA]. 1 330 45.872 T 22-04-2016 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1|UniPathway: UPA00134 YE0003 500a30b54d55ba31c115278d847dcb8b 330 Gene3D G3DSA:3.30.930.10 2 327 3.8E-155 T 22-04-2016 YE1756 f7061ccad2c63e4d9d2bfa237c0ea6ee 79 ProDom PD060536 YECJ YPO1738 1 79 2.0E-37 T 22-04-2016 IPR020262 Uncharacterised protein family YecJ YE1756 f7061ccad2c63e4d9d2bfa237c0ea6ee 79 Gene3D G3DSA:3.40.50.1770 7 76 2.4E-4 T 22-04-2016 YE1756 f7061ccad2c63e4d9d2bfa237c0ea6ee 79 Pfam PF10964 Protein of unknown function (DUF2766) 1 78 6.0E-48 T 22-04-2016 IPR020262 Uncharacterised protein family YecJ YE1295 e70d49538bcfc1056b42a8fc3deea121 318 Gene3D G3DSA:3.40.50.2300 163 295 3.7E-16 T 22-04-2016 YE1295 e70d49538bcfc1056b42a8fc3deea121 318 SMART SM00354 1 71 5.7E-26 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE1295 e70d49538bcfc1056b42a8fc3deea121 318 Pfam PF13377 Periplasmic binding protein-like domain 161 292 5.7E-11 T 22-04-2016 YE1295 e70d49538bcfc1056b42a8fc3deea121 318 PANTHER PTHR30146 1 290 4.4E-44 T 22-04-2016 YE1295 e70d49538bcfc1056b42a8fc3deea121 318 Gene3D G3DSA:1.10.260.40 3 53 2.5E-23 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE1295 e70d49538bcfc1056b42a8fc3deea121 318 SUPERFAMILY SSF53822 77 310 2.55E-19 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YE1295 e70d49538bcfc1056b42a8fc3deea121 318 Gene3D G3DSA:3.40.50.2300 54 162 5.6E-17 T 22-04-2016 YE1295 e70d49538bcfc1056b42a8fc3deea121 318 SUPERFAMILY SSF47413 2 59 1.59E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE1295 e70d49538bcfc1056b42a8fc3deea121 318 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.0E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE1295 e70d49538bcfc1056b42a8fc3deea121 318 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.0E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE1295 e70d49538bcfc1056b42a8fc3deea121 318 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.5E-18 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE4123A 2c049d701d478c7a614bbafbc96164e8 255 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 111 128 - T 22-04-2016 IPR018046 Pili assembly chaperone, conserved site YE4123A 2c049d701d478c7a614bbafbc96164e8 255 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 176 233 2.1E-13 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YE4123A 2c049d701d478c7a614bbafbc96164e8 255 PANTHER PTHR30251:SF5 6 244 2.5E-104 T 22-04-2016 YE4123A 2c049d701d478c7a614bbafbc96164e8 255 SUPERFAMILY SSF49354 35 154 6.8E-32 T 22-04-2016 IPR008962 PapD-like YE4123A 2c049d701d478c7a614bbafbc96164e8 255 Gene3D G3DSA:2.60.40.360 35 154 5.7E-38 T 22-04-2016 IPR008962 PapD-like YE4123A 2c049d701d478c7a614bbafbc96164e8 255 PANTHER PTHR30251 6 244 2.5E-104 T 22-04-2016 YE4123A 2c049d701d478c7a614bbafbc96164e8 255 PRINTS PR00969 Pili chaperone signature 36 45 6.6E-30 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YE4123A 2c049d701d478c7a614bbafbc96164e8 255 PRINTS PR00969 Pili chaperone signature 112 129 6.6E-30 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YE4123A 2c049d701d478c7a614bbafbc96164e8 255 PRINTS PR00969 Pili chaperone signature 135 150 6.6E-30 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YE4123A 2c049d701d478c7a614bbafbc96164e8 255 PRINTS PR00969 Pili chaperone signature 82 103 6.6E-30 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YE4123A 2c049d701d478c7a614bbafbc96164e8 255 PRINTS PR00969 Pili chaperone signature 171 186 6.6E-30 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YE4123A 2c049d701d478c7a614bbafbc96164e8 255 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 36 153 4.6E-32 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 YE4123A 2c049d701d478c7a614bbafbc96164e8 255 SUPERFAMILY SSF49584 160 247 1.22E-18 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YE4123A 2c049d701d478c7a614bbafbc96164e8 255 Gene3D G3DSA:2.60.40.1070 158 246 2.3E-23 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YE0930 31667b836121628320f4ee99ebff39ab 143 PANTHER PTHR34846:SF2 24 142 1.6E-16 T 22-04-2016 YE0930 31667b836121628320f4ee99ebff39ab 143 Gene3D G3DSA:1.20.1290.10 5 142 1.2E-47 T 22-04-2016 IPR029032 AhpD-like YE0930 31667b836121628320f4ee99ebff39ab 143 SUPERFAMILY SSF69118 8 142 1.3E-42 T 22-04-2016 IPR029032 AhpD-like YE0930 31667b836121628320f4ee99ebff39ab 143 Pfam PF02627 Carboxymuconolactone decarboxylase family 15 95 8.3E-15 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 YE0930 31667b836121628320f4ee99ebff39ab 143 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 29 77 7.0E-14 T 22-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 YE0930 31667b836121628320f4ee99ebff39ab 143 PANTHER PTHR34846 24 142 1.6E-16 T 22-04-2016 YE2355 be0f241297626bfce9b9b9de5b4a981c 221 SUPERFAMILY SSF53098 5 182 1.57E-33 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE2355 be0f241297626bfce9b9b9de5b4a981c 221 Pfam PF00929 Exonuclease 5 148 1.9E-15 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III YE2355 be0f241297626bfce9b9b9de5b4a981c 221 SMART SM00479 2 157 3.7E-29 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III YE2355 be0f241297626bfce9b9b9de5b4a981c 221 Gene3D G3DSA:3.30.420.10 3 153 7.2E-36 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE2355 be0f241297626bfce9b9b9de5b4a981c 221 PANTHER PTHR30231 5 214 1.9E-29 T 22-04-2016 YE0908 5015f49fac604eaa2a331df87d24d740 391 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 237 339 1.5E-26 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal YE0908 5015f49fac604eaa2a331df87d24d740 391 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 149 165 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site YE0908 5015f49fac604eaa2a331df87d24d740 391 PANTHER PTHR11712 144 387 1.4E-50 T 22-04-2016 YE0908 5015f49fac604eaa2a331df87d24d740 391 SMART SM00825 Beta-ketoacyl synthase 14 390 7.2E-9 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YE0908 5015f49fac604eaa2a331df87d24d740 391 SUPERFAMILY SSF53901 4 231 6.58E-39 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YE0908 5015f49fac604eaa2a331df87d24d740 391 SUPERFAMILY SSF53901 205 388 2.61E-44 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YE0908 5015f49fac604eaa2a331df87d24d740 391 Gene3D G3DSA:3.40.47.10 54 231 1.7E-30 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YE0908 5015f49fac604eaa2a331df87d24d740 391 Gene3D G3DSA:3.40.47.10 243 388 3.1E-46 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YE0908 5015f49fac604eaa2a331df87d24d740 391 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 93 231 2.1E-20 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal YE2131 7c69b9272f1c6bd9330b9604d7d0aab4 403 SUPERFAMILY SSF69118 260 401 2.45E-25 T 22-04-2016 IPR029032 AhpD-like YE2131 7c69b9272f1c6bd9330b9604d7d0aab4 403 SUPERFAMILY SSF69118 72 207 1.46E-15 T 22-04-2016 IPR029032 AhpD-like YE2131 7c69b9272f1c6bd9330b9604d7d0aab4 403 Gene3D G3DSA:1.20.1290.10 103 209 5.8E-15 T 22-04-2016 IPR029032 AhpD-like YE2131 7c69b9272f1c6bd9330b9604d7d0aab4 403 Gene3D G3DSA:1.20.1290.10 286 402 5.4E-28 T 22-04-2016 IPR029032 AhpD-like YE2193 9d93eadd9a8e44e1e4def53c2402a69f 253 Hamap MF_01005 Vitamin B12 import ATP-binding protein BtuD [btuD]. 4 251 46.053 T 22-04-2016 IPR023693 ABC transporter, vitamin B12, BtuD GO:0005524|GO:0015889|GO:0016887 YE2193 9d93eadd9a8e44e1e4def53c2402a69f 253 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE2193 9d93eadd9a8e44e1e4def53c2402a69f 253 SMART SM00382 24 213 7.3E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain YE2193 9d93eadd9a8e44e1e4def53c2402a69f 253 Pfam PF00005 ABC transporter 18 164 5.7E-17 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE2193 9d93eadd9a8e44e1e4def53c2402a69f 253 SUPERFAMILY SSF52540 15 228 3.47E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2193 9d93eadd9a8e44e1e4def53c2402a69f 253 PANTHER PTHR24220 1 249 5.9E-114 T 22-04-2016 YE2193 9d93eadd9a8e44e1e4def53c2402a69f 253 PANTHER PTHR24220:SF547 1 249 5.9E-114 T 22-04-2016 YE2193 9d93eadd9a8e44e1e4def53c2402a69f 253 Gene3D G3DSA:3.40.50.300 17 234 5.7E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0632 e6a6e9fb83e792f40beb844fe7e9c521 434 PANTHER PTHR10657:SF15 1 427 1.8E-170 T 22-04-2016 YE0632 e6a6e9fb83e792f40beb844fe7e9c521 434 SUPERFAMILY SSF54534 283 385 3.21E-33 T 22-04-2016 YE0632 e6a6e9fb83e792f40beb844fe7e9c521 434 SUPERFAMILY SSF54534 173 277 4.45E-28 T 22-04-2016 YE0632 e6a6e9fb83e792f40beb844fe7e9c521 434 PANTHER PTHR10657 1 427 1.8E-170 T 22-04-2016 YE0632 e6a6e9fb83e792f40beb844fe7e9c521 434 Gene3D G3DSA:3.10.50.40 282 406 1.1E-36 T 22-04-2016 YE0632 e6a6e9fb83e792f40beb844fe7e9c521 434 Gene3D G3DSA:3.10.50.40 167 278 5.8E-31 T 22-04-2016 YE0632 e6a6e9fb83e792f40beb844fe7e9c521 434 Gene3D G3DSA:1.10.3120.10 37 116 1.7E-4 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 YE0632 e6a6e9fb83e792f40beb844fe7e9c521 434 Pfam PF09312 SurA N-terminal domain 25 142 1.7E-45 T 22-04-2016 IPR015391 SurA N-terminal YE0632 e6a6e9fb83e792f40beb844fe7e9c521 434 SUPERFAMILY SSF109998 25 201 8.63E-45 T 22-04-2016 IPR027304 Trigger factor/SurA domain YE0632 e6a6e9fb83e792f40beb844fe7e9c521 434 Pfam PF00639 PPIC-type PPIASE domain 178 272 3.2E-19 T 22-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 YE0632 e6a6e9fb83e792f40beb844fe7e9c521 434 Pfam PF00639 PPIC-type PPIASE domain 289 381 1.6E-25 T 22-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 YE0632 e6a6e9fb83e792f40beb844fe7e9c521 434 Hamap MF_01183 Chaperone SurA [surA]. 9 428 34.265 T 22-04-2016 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 YE0808 45b88a67bf0b0ba57cbe758bf76f3440 702 Pfam PF00679 Elongation factor G C-terminus 606 693 3.2E-31 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain YE0808 45b88a67bf0b0ba57cbe758bf76f3440 702 PANTHER PTHR23115:SF66 308 698 0.0 T 22-04-2016 YE0808 45b88a67bf0b0ba57cbe758bf76f3440 702 PANTHER PTHR23115:SF66 6 184 0.0 T 22-04-2016 YE0808 45b88a67bf0b0ba57cbe758bf76f3440 702 PANTHER PTHR23115:SF66 261 289 0.0 T 22-04-2016 YE0808 45b88a67bf0b0ba57cbe758bf76f3440 702 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 184 1.1E-29 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 YE0808 45b88a67bf0b0ba57cbe758bf76f3440 702 SUPERFAMILY SSF54980 609 696 2.25E-28 T 22-04-2016 IPR009022 Elongation factor G, III-V domain YE0808 45b88a67bf0b0ba57cbe758bf76f3440 702 SMART SM00838 606 694 9.1E-53 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain YE0808 45b88a67bf0b0ba57cbe758bf76f3440 702 Pfam PF03144 Elongation factor Tu domain 2 329 396 8.8E-17 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 YE0808 45b88a67bf0b0ba57cbe758bf76f3440 702 PANTHER PTHR23115 308 698 0.0 T 22-04-2016 YE0808 45b88a67bf0b0ba57cbe758bf76f3440 702 PANTHER PTHR23115 6 184 0.0 T 22-04-2016 YE0808 45b88a67bf0b0ba57cbe758bf76f3440 702 PANTHER PTHR23115 261 289 0.0 T 22-04-2016 YE0808 45b88a67bf0b0ba57cbe758bf76f3440 702 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site YE0808 45b88a67bf0b0ba57cbe758bf76f3440 702 Hamap MF_00054_B Elongation factor G [fusA]. 6 698 107.203 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 YE0808 45b88a67bf0b0ba57cbe758bf76f3440 702 Pfam PF03764 Elongation factor G, domain IV 484 604 9.9E-45 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 YE0808 45b88a67bf0b0ba57cbe758bf76f3440 702 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 698 0.0 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 YE0808 45b88a67bf0b0ba57cbe758bf76f3440 702 PRINTS PR00315 GTP-binding elongation factor signature 85 95 4.2E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YE0808 45b88a67bf0b0ba57cbe758bf76f3440 702 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.2E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YE0808 45b88a67bf0b0ba57cbe758bf76f3440 702 PRINTS PR00315 GTP-binding elongation factor signature 137 146 4.2E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YE0808 45b88a67bf0b0ba57cbe758bf76f3440 702 PRINTS PR00315 GTP-binding elongation factor signature 101 112 4.2E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YE0808 45b88a67bf0b0ba57cbe758bf76f3440 702 PRINTS PR00315 GTP-binding elongation factor signature 12 25 4.2E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YE0808 45b88a67bf0b0ba57cbe758bf76f3440 702 SUPERFAMILY SSF50447 310 405 3.98E-36 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain YE0808 45b88a67bf0b0ba57cbe758bf76f3440 702 SUPERFAMILY SSF50447 256 281 3.98E-36 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain YE0808 45b88a67bf0b0ba57cbe758bf76f3440 702 Gene3D G3DSA:3.40.50.300 6 293 6.1E-97 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0808 45b88a67bf0b0ba57cbe758bf76f3440 702 SUPERFAMILY SSF52540 6 288 2.7E-103 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0808 45b88a67bf0b0ba57cbe758bf76f3440 702 SMART SM00889 485 604 7.6E-67 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 YE0808 45b88a67bf0b0ba57cbe758bf76f3440 702 SUPERFAMILY SSF54211 484 605 2.28E-42 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YE0808 45b88a67bf0b0ba57cbe758bf76f3440 702 Gene3D G3DSA:3.30.230.10 489 604 1.5E-46 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YE0808 45b88a67bf0b0ba57cbe758bf76f3440 702 SUPERFAMILY SSF54980 407 485 3.31E-25 T 22-04-2016 IPR009022 Elongation factor G, III-V domain YE0808 45b88a67bf0b0ba57cbe758bf76f3440 702 Gene3D G3DSA:3.30.70.870 411 485 2.4E-39 T 22-04-2016 YE0808 45b88a67bf0b0ba57cbe758bf76f3440 702 Gene3D G3DSA:2.40.30.10 310 410 7.4E-38 T 22-04-2016 YE0808 45b88a67bf0b0ba57cbe758bf76f3440 702 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 1.0E-64 T 22-04-2016 YE0808 45b88a67bf0b0ba57cbe758bf76f3440 702 Pfam PF14492 Elongation Factor G, domain II 409 483 2.8E-35 T 22-04-2016 IPR009022 Elongation factor G, III-V domain YE0808 45b88a67bf0b0ba57cbe758bf76f3440 702 Gene3D G3DSA:3.30.70.240 605 692 2.1E-33 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain YE3594 c73088e680372b799c4e5df3bbab9497 500 ProSitePatterns PS00216 Sugar transport proteins signature 1. 316 333 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 YE3594 c73088e680372b799c4e5df3bbab9497 500 SUPERFAMILY SSF103661 466 498 3.66E-11 T 22-04-2016 YE3594 c73088e680372b799c4e5df3bbab9497 500 SUPERFAMILY SSF103473 25 445 7.32E-71 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE3594 c73088e680372b799c4e5df3bbab9497 500 Pfam PF08946 Osmosensory transporter coiled coil 455 500 4.3E-21 T 22-04-2016 IPR015041 Osmosensory transporter coiled coil YE3594 c73088e680372b799c4e5df3bbab9497 500 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 34 433 1.4E-142 T 22-04-2016 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 YE3594 c73088e680372b799c4e5df3bbab9497 500 PANTHER PTHR23508 4 463 1.5E-263 T 22-04-2016 YE3594 c73088e680372b799c4e5df3bbab9497 500 PANTHER PTHR23508:SF17 4 463 1.5E-263 T 22-04-2016 YE3594 c73088e680372b799c4e5df3bbab9497 500 Gene3D G3DSA:1.20.1250.20 259 452 1.3E-29 T 22-04-2016 YE3594 c73088e680372b799c4e5df3bbab9497 500 Gene3D G3DSA:1.20.1250.20 25 230 4.1E-23 T 22-04-2016 YE3594 c73088e680372b799c4e5df3bbab9497 500 Gene3D G3DSA:1.10.287.370 455 492 5.5E-4 T 22-04-2016 IPR009053 Prefoldin YE3594 c73088e680372b799c4e5df3bbab9497 500 Pfam PF00083 Sugar (and other) transporter 29 449 1.4E-65 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 YE1815 eb0fc35e3d492ecd4826cb7d8ebe327c 180 SUPERFAMILY SSF53955 3 175 5.62E-45 T 22-04-2016 IPR023346 Lysozyme-like domain YE1815 eb0fc35e3d492ecd4826cb7d8ebe327c 180 Pfam PF05838 Glycosyl hydrolase 108 7 90 4.6E-25 T 22-04-2016 IPR008565 Protein of unknown function DUF847 YE1815 eb0fc35e3d492ecd4826cb7d8ebe327c 180 Gene3D G3DSA:1.20.141.10 4 178 5.5E-47 T 22-04-2016 YE1815 eb0fc35e3d492ecd4826cb7d8ebe327c 180 Pfam PF09374 Predicted Peptidoglycan domain 94 178 4.2E-24 T 22-04-2016 IPR018537 Peptidoglycan binding domain YE4194 7e1e858f9e721dd5022b3fa7c4bdfe3d 396 PRINTS PR00700 Protein tyrosine phosphatase signature 336 351 1.2E-8 T 22-04-2016 IPR000242 PTP type protein phosphatase GO:0004725|GO:0006470 YE4194 7e1e858f9e721dd5022b3fa7c4bdfe3d 396 PRINTS PR00700 Protein tyrosine phosphatase signature 307 325 1.2E-8 T 22-04-2016 IPR000242 PTP type protein phosphatase GO:0004725|GO:0006470 YE4194 7e1e858f9e721dd5022b3fa7c4bdfe3d 396 PRINTS PR00700 Protein tyrosine phosphatase signature 257 274 1.2E-8 T 22-04-2016 IPR000242 PTP type protein phosphatase GO:0004725|GO:0006470 YE4194 7e1e858f9e721dd5022b3fa7c4bdfe3d 396 PRINTS PR00700 Protein tyrosine phosphatase signature 353 363 1.2E-8 T 22-04-2016 IPR000242 PTP type protein phosphatase GO:0004725|GO:0006470 YE4194 7e1e858f9e721dd5022b3fa7c4bdfe3d 396 Gene3D G3DSA:3.90.190.10 138 368 1.5E-39 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like YE4194 7e1e858f9e721dd5022b3fa7c4bdfe3d 396 SUPERFAMILY SSF52799 142 365 1.9E-35 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like YE4194 7e1e858f9e721dd5022b3fa7c4bdfe3d 396 Pfam PF00102 Protein-tyrosine phosphatase 154 366 3.4E-24 T 22-04-2016 IPR000242 PTP type protein phosphatase GO:0004725|GO:0006470 YE4194 7e1e858f9e721dd5022b3fa7c4bdfe3d 396 SMART SM00404 258 369 7.1E-18 T 22-04-2016 IPR003595 Protein-tyrosine phosphatase, catalytic YE4194 7e1e858f9e721dd5022b3fa7c4bdfe3d 396 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 310 320 - T 22-04-2016 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311|GO:0016791 YE4194 7e1e858f9e721dd5022b3fa7c4bdfe3d 396 PRINTS PR01371 Salmonella/Yersinia modular tyrosine phosphatase signature 308 319 6.9E-10 T 22-04-2016 IPR003546 Type III secreted modular tyrosine phosphatase, SptP/YopH GO:0004725|GO:0006470 YE4194 7e1e858f9e721dd5022b3fa7c4bdfe3d 396 PRINTS PR01371 Salmonella/Yersinia modular tyrosine phosphatase signature 255 269 6.9E-10 T 22-04-2016 IPR003546 Type III secreted modular tyrosine phosphatase, SptP/YopH GO:0004725|GO:0006470 YE4194 7e1e858f9e721dd5022b3fa7c4bdfe3d 396 PRINTS PR01371 Salmonella/Yersinia modular tyrosine phosphatase signature 170 183 6.9E-10 T 22-04-2016 IPR003546 Type III secreted modular tyrosine phosphatase, SptP/YopH GO:0004725|GO:0006470 YE4194 7e1e858f9e721dd5022b3fa7c4bdfe3d 396 SMART SM00194 115 372 5.1E-9 T 22-04-2016 IPR000242 PTP type protein phosphatase GO:0004725|GO:0006470 YE2296 c96930b22432fdb10dc9b7ce4001d34e 1060 PANTHER PTHR36251 1 1025 0.0 T 22-04-2016 YE2296 c96930b22432fdb10dc9b7ce4001d34e 1060 Pfam PF13550 Putative phage tail protein 341 502 6.4E-17 T 22-04-2016 IPR032876 Tip attachment protein J YE2296 c96930b22432fdb10dc9b7ce4001d34e 1060 Gene3D G3DSA:2.60.40.10 733 802 2.6E-5 T 22-04-2016 IPR013783 Immunoglobulin-like fold YE2296 c96930b22432fdb10dc9b7ce4001d34e 1060 SUPERFAMILY SSF49265 640 806 2.9E-7 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 YE2296 c96930b22432fdb10dc9b7ce4001d34e 1060 Pfam PF09327 Domain of unknown function (DUF1983) 903 982 3.8E-23 T 22-04-2016 IPR015406 Domain of unknown function DUF1983 YE2296 c96930b22432fdb10dc9b7ce4001d34e 1060 PANTHER PTHR36251:SF2 1 1025 0.0 T 22-04-2016 YE2233 8d3d515816cdd5120b131cdb292da379 545 Gene3D G3DSA:3.10.105.10 312 513 1.4E-61 T 22-04-2016 YE2233 8d3d515816cdd5120b131cdb292da379 545 SUPERFAMILY SSF53850 37 527 3.68E-149 T 22-04-2016 YE2233 8d3d515816cdd5120b131cdb292da379 545 Gene3D G3DSA:3.40.190.10 160 311 4.1E-57 T 22-04-2016 YE2233 8d3d515816cdd5120b131cdb292da379 545 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 89 110 - T 22-04-2016 IPR023765 Solute-binding protein family 5, conserved site YE2233 8d3d515816cdd5120b131cdb292da379 545 PANTHER PTHR30290:SF10 1 544 6.3E-215 T 22-04-2016 YE2233 8d3d515816cdd5120b131cdb292da379 545 PIRSF PIRSF002741 4 544 1.9E-116 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 YE2233 8d3d515816cdd5120b131cdb292da379 545 PANTHER PTHR30290 1 544 6.3E-215 T 22-04-2016 YE2233 8d3d515816cdd5120b131cdb292da379 545 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 84 465 2.3E-88 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain YE3655 1dc35913a59ce5e7e47054ec8851b08c 243 Gene3D G3DSA:3.40.1130.10 48 238 3.3E-19 T 22-04-2016 YE3655 1dc35913a59ce5e7e47054ec8851b08c 243 SUPERFAMILY SSF69593 2 238 4.84E-63 T 22-04-2016 YE3655 1dc35913a59ce5e7e47054ec8851b08c 243 Pfam PF01553 Acyltransferase 64 180 3.8E-32 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 YE3655 1dc35913a59ce5e7e47054ec8851b08c 243 PANTHER PTHR10434:SF20 1 243 7.1E-168 T 22-04-2016 YE3655 1dc35913a59ce5e7e47054ec8851b08c 243 SMART SM00563 67 182 2.1E-39 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 YE3655 1dc35913a59ce5e7e47054ec8851b08c 243 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 4.4E-47 T 22-04-2016 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|Reactome: REACT_22258|UniPathway: UPA00557 YE3655 1dc35913a59ce5e7e47054ec8851b08c 243 PANTHER PTHR10434 1 243 7.1E-168 T 22-04-2016 YE3914 4607bef6f01d5b77e0d11f76a7676fcb 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 76 7.8E-38 T 22-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3914 4607bef6f01d5b77e0d11f76a7676fcb 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 3 81 26.173 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3914 4607bef6f01d5b77e0d11f76a7676fcb 84 PANTHER PTHR10744 4 82 1.9E-43 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3914 4607bef6f01d5b77e0d11f76a7676fcb 84 SUPERFAMILY SSF50249 5 82 2.7E-33 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE3914 4607bef6f01d5b77e0d11f76a7676fcb 84 Gene3D G3DSA:2.40.50.140 6 82 2.0E-36 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE3914 4607bef6f01d5b77e0d11f76a7676fcb 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 6 76 7.0E-36 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3914 4607bef6f01d5b77e0d11f76a7676fcb 84 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 9.2E-14 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3914 4607bef6f01d5b77e0d11f76a7676fcb 84 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 9.2E-14 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3914 4607bef6f01d5b77e0d11f76a7676fcb 84 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 9.2E-14 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3914 4607bef6f01d5b77e0d11f76a7676fcb 84 Pfam PF00366 Ribosomal protein S17 10 76 1.7E-33 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3914 4607bef6f01d5b77e0d11f76a7676fcb 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 22-04-2016 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3309 d73aa1c4e9ab6027c6a91760aa5945e4 633 Pfam PF13604 AAA domain 173 333 4.4E-32 T 22-04-2016 YE3309 d73aa1c4e9ab6027c6a91760aa5945e4 633 PANTHER PTHR10887 56 64 6.8E-93 T 22-04-2016 YE3309 d73aa1c4e9ab6027c6a91760aa5945e4 633 PANTHER PTHR10887 164 339 6.8E-93 T 22-04-2016 YE3309 d73aa1c4e9ab6027c6a91760aa5945e4 633 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 5 629 1.9E-187 T 22-04-2016 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 YE3309 d73aa1c4e9ab6027c6a91760aa5945e4 633 SUPERFAMILY SSF52540 456 629 1.15E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3309 d73aa1c4e9ab6027c6a91760aa5945e4 633 SUPERFAMILY SSF52540 369 400 1.15E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3309 d73aa1c4e9ab6027c6a91760aa5945e4 633 SUPERFAMILY SSF52540 298 338 1.15E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3309 d73aa1c4e9ab6027c6a91760aa5945e4 633 PANTHER PTHR10887:SF351 56 64 6.8E-93 T 22-04-2016 YE3309 d73aa1c4e9ab6027c6a91760aa5945e4 633 PANTHER PTHR10887:SF351 164 339 6.8E-93 T 22-04-2016 YE3309 d73aa1c4e9ab6027c6a91760aa5945e4 633 SUPERFAMILY SSF52540 7 382 3.07E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3309 d73aa1c4e9ab6027c6a91760aa5945e4 633 Gene3D G3DSA:3.40.50.300 546 617 3.6E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3309 d73aa1c4e9ab6027c6a91760aa5945e4 633 Gene3D G3DSA:3.40.50.300 376 402 3.6E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3309 d73aa1c4e9ab6027c6a91760aa5945e4 633 Gene3D G3DSA:3.40.50.300 314 327 3.6E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3309 d73aa1c4e9ab6027c6a91760aa5945e4 633 Gene3D G3DSA:3.40.50.300 439 486 3.6E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3309 d73aa1c4e9ab6027c6a91760aa5945e4 633 Gene3D G3DSA:3.40.50.300 169 313 8.4E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3309 d73aa1c4e9ab6027c6a91760aa5945e4 633 Pfam PF13538 UvrD-like helicase C-terminal domain 558 604 2.0E-15 T 22-04-2016 IPR027785 UvrD-like helicase C-terminal domain YE3309 d73aa1c4e9ab6027c6a91760aa5945e4 633 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 13 629 54.422 T 22-04-2016 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 YE2915 e54fe94a2be5c5f3850f1fc05d56790e 497 Pfam PF00005 ABC transporter 282 435 6.3E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE2915 e54fe94a2be5c5f3850f1fc05d56790e 497 Pfam PF00005 ABC transporter 36 169 4.8E-18 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE2915 e54fe94a2be5c5f3850f1fc05d56790e 497 SUPERFAMILY SSF52540 37 231 9.46E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2915 e54fe94a2be5c5f3850f1fc05d56790e 497 SUPERFAMILY SSF52540 257 490 8.99E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2915 e54fe94a2be5c5f3850f1fc05d56790e 497 SMART SM00382 291 486 2.3E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain YE2915 e54fe94a2be5c5f3850f1fc05d56790e 497 SMART SM00382 34 225 7.2E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain YE2915 e54fe94a2be5c5f3850f1fc05d56790e 497 Gene3D G3DSA:3.40.50.300 259 489 1.5E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2915 e54fe94a2be5c5f3850f1fc05d56790e 497 PANTHER PTHR24220:SF557 3 390 1.5E-184 T 22-04-2016 YE2915 e54fe94a2be5c5f3850f1fc05d56790e 497 PANTHER PTHR24220 3 390 1.5E-184 T 22-04-2016 YE2915 e54fe94a2be5c5f3850f1fc05d56790e 497 Gene3D G3DSA:3.40.50.300 37 232 2.3E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YEP0086 ad36240d890c5bf5523e8278582c5f95 116 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 48 116 1.2E-17 T 22-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 YEP0086 ad36240d890c5bf5523e8278582c5f95 116 SUPERFAMILY SSF56091 4 42 1.24E-6 T 22-04-2016 YEP0086 ad36240d890c5bf5523e8278582c5f95 116 PANTHER PTHR23389 1 116 1.8E-62 T 22-04-2016 YEP0086 ad36240d890c5bf5523e8278582c5f95 116 Gene3D G3DSA:2.40.50.140 48 116 3.5E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YEP0086 ad36240d890c5bf5523e8278582c5f95 116 Gene3D G3DSA:3.30.1490.70 8 47 6.4E-5 T 22-04-2016 YEP0086 ad36240d890c5bf5523e8278582c5f95 116 SUPERFAMILY SSF50249 45 115 3.0E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YEP0086 ad36240d890c5bf5523e8278582c5f95 116 PANTHER PTHR23389:SF7 1 116 1.8E-62 T 22-04-2016 YE1941 972719a1317a24bba32c5dc3734a3ca5 199 PANTHER PTHR30546 1 197 4.3E-136 T 22-04-2016 YE1941 972719a1317a24bba32c5dc3734a3ca5 199 Hamap MF_01017 NAD(P)H dehydrogenase (quinone). 1 199 39.953 T 22-04-2016 IPR010089 Flavoprotein WrbA GO:0010181|GO:0045892 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 YE1941 972719a1317a24bba32c5dc3734a3ca5 199 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 2 197 1.8E-98 T 22-04-2016 IPR010089 Flavoprotein WrbA GO:0010181|GO:0045892 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 YE1941 972719a1317a24bba32c5dc3734a3ca5 199 SUPERFAMILY SSF52218 1 197 1.7E-60 T 22-04-2016 IPR029039 Flavoprotein-like domain YE1941 972719a1317a24bba32c5dc3734a3ca5 199 Gene3D G3DSA:3.40.50.360 1 198 1.2E-72 T 22-04-2016 IPR029039 Flavoprotein-like domain YE1941 972719a1317a24bba32c5dc3734a3ca5 199 PANTHER PTHR30546:SF10 1 197 4.3E-136 T 22-04-2016 YE1941 972719a1317a24bba32c5dc3734a3ca5 199 Pfam PF03358 NADPH-dependent FMN reductase 5 143 1.8E-12 T 22-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 YE1993 0d280297e29e9cb295a0ab8975b96c48 207 SUPERFAMILY SSF54862 38 176 7.44E-30 T 22-04-2016 YE1993 0d280297e29e9cb295a0ab8975b96c48 207 Gene3D G3DSA:3.30.70.20 111 177 6.6E-17 T 22-04-2016 YE1993 0d280297e29e9cb295a0ab8975b96c48 207 PIRSF PIRSF005784 3 190 1.8E-85 T 22-04-2016 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 YE1993 0d280297e29e9cb295a0ab8975b96c48 207 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 2 187 9.9E-85 T 22-04-2016 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 YE1993 0d280297e29e9cb295a0ab8975b96c48 207 Pfam PF14697 4Fe-4S dicluster domain 110 164 2.4E-17 T 22-04-2016 YE1993 0d280297e29e9cb295a0ab8975b96c48 207 PANTHER PTHR11938 1 204 1.2E-95 T 22-04-2016 YE1993 0d280297e29e9cb295a0ab8975b96c48 207 Pfam PF04060 Putative Fe-S cluster 44 76 1.7E-14 T 22-04-2016 IPR007202 4Fe-4S domain GO:0051536 YE1993 0d280297e29e9cb295a0ab8975b96c48 207 Hamap MF_00463 Electron transport complex subunit RsxB [rsxB]. 4 185 43.429 T 22-04-2016 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 YE1993 0d280297e29e9cb295a0ab8975b96c48 207 PANTHER PTHR11938:SF64 1 204 1.2E-95 T 22-04-2016 YE1993 0d280297e29e9cb295a0ab8975b96c48 207 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YE1993 0d280297e29e9cb295a0ab8975b96c48 207 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 117 128 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YE4013 92eab57265e98a68cfa59facd666769f 727 SUPERFAMILY SSF51011 623 724 3.69E-36 T 22-04-2016 YE4013 92eab57265e98a68cfa59facd666769f 727 Gene3D G3DSA:2.60.40.10 14 105 4.0E-18 T 22-04-2016 IPR013783 Immunoglobulin-like fold YE4013 92eab57265e98a68cfa59facd666769f 727 Gene3D G3DSA:2.60.40.10 113 220 1.3E-40 T 22-04-2016 IPR013783 Immunoglobulin-like fold YE4013 92eab57265e98a68cfa59facd666769f 727 SMART SM00642 247 596 2.6E-6 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 YE4013 92eab57265e98a68cfa59facd666769f 727 SUPERFAMILY SSF81296 16 115 1.47E-16 T 22-04-2016 IPR014756 Immunoglobulin E-set YE4013 92eab57265e98a68cfa59facd666769f 727 Gene3D G3DSA:3.20.20.80 242 611 4.1E-90 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 YE4013 92eab57265e98a68cfa59facd666769f 727 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 125 207 2.0E-24 T 22-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 YE4013 92eab57265e98a68cfa59facd666769f 727 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 628 724 1.8E-23 T 22-04-2016 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: REACT_474 YE4013 92eab57265e98a68cfa59facd666769f 727 PANTHER PTHR10357:SF158 49 725 0.0 T 22-04-2016 YE4013 92eab57265e98a68cfa59facd666769f 727 PANTHER PTHR10357 49 725 0.0 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 YE4013 92eab57265e98a68cfa59facd666769f 727 Pfam PF00128 Alpha amylase, catalytic domain 273 346 1.4E-9 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 YE4013 92eab57265e98a68cfa59facd666769f 727 SUPERFAMILY SSF81296 117 223 1.75E-35 T 22-04-2016 IPR014756 Immunoglobulin E-set YE4013 92eab57265e98a68cfa59facd666769f 727 PIRSF PIRSF000463 6 726 3.0E-286 T 22-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 YE4013 92eab57265e98a68cfa59facd666769f 727 SUPERFAMILY SSF51445 230 620 8.45E-113 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YE4013 92eab57265e98a68cfa59facd666769f 727 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 101 726 43.731 T 22-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 YE4013 92eab57265e98a68cfa59facd666769f 727 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 109 723 2.2E-300 T 22-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 YE4013 92eab57265e98a68cfa59facd666769f 727 Gene3D G3DSA:2.60.40.1180 623 724 6.2E-37 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta YE3055 5ace3ff8f308b41f5fd2b5ead8d55941 212 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 34 191 1.4E-24 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain YE3055 5ace3ff8f308b41f5fd2b5ead8d55941 212 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 31 41 - T 22-04-2016 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 YE3055 5ace3ff8f308b41f5fd2b5ead8d55941 212 PANTHER PTHR30383 27 205 3.3E-47 T 22-04-2016 YE3055 5ace3ff8f308b41f5fd2b5ead8d55941 212 Gene3D G3DSA:3.40.50.1110 29 208 4.7E-55 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain YE3055 5ace3ff8f308b41f5fd2b5ead8d55941 212 SUPERFAMILY SSF52266 30 207 6.62E-51 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain YE3055 5ace3ff8f308b41f5fd2b5ead8d55941 212 PANTHER PTHR30383:SF5 27 205 3.3E-47 T 22-04-2016 YE1811 401f29a0574549a7536d25e9334086bf 249 Pfam PF13683 Integrase core domain 162 228 1.3E-32 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YE1811 401f29a0574549a7536d25e9334086bf 249 Gene3D G3DSA:3.30.420.10 74 228 9.1E-41 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE1811 401f29a0574549a7536d25e9334086bf 249 PANTHER PTHR32552:SF35 1 236 1.6E-114 T 22-04-2016 YE1811 401f29a0574549a7536d25e9334086bf 249 PANTHER PTHR32552 1 236 1.6E-114 T 22-04-2016 YE1811 401f29a0574549a7536d25e9334086bf 249 SUPERFAMILY SSF53098 72 233 6.83E-41 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE2668 670b553e39f56081f46c5fc9cacfbc37 246 Gene3D G3DSA:2.60.40.1070 146 237 3.9E-14 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YE2668 670b553e39f56081f46c5fc9cacfbc37 246 PRINTS PR00969 Pili chaperone signature 164 179 5.2E-28 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YE2668 670b553e39f56081f46c5fc9cacfbc37 246 PRINTS PR00969 Pili chaperone signature 98 115 5.2E-28 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YE2668 670b553e39f56081f46c5fc9cacfbc37 246 PRINTS PR00969 Pili chaperone signature 70 91 5.2E-28 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YE2668 670b553e39f56081f46c5fc9cacfbc37 246 PRINTS PR00969 Pili chaperone signature 125 140 5.2E-28 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YE2668 670b553e39f56081f46c5fc9cacfbc37 246 PRINTS PR00969 Pili chaperone signature 21 30 5.2E-28 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YE2668 670b553e39f56081f46c5fc9cacfbc37 246 Gene3D G3DSA:2.60.40.360 21 143 3.6E-40 T 22-04-2016 IPR008962 PapD-like YE2668 670b553e39f56081f46c5fc9cacfbc37 246 PANTHER PTHR30251 1 245 1.3E-116 T 22-04-2016 YE2668 670b553e39f56081f46c5fc9cacfbc37 246 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 169 236 1.2E-12 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YE2668 670b553e39f56081f46c5fc9cacfbc37 246 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 97 114 - T 22-04-2016 IPR018046 Pili assembly chaperone, conserved site YE2668 670b553e39f56081f46c5fc9cacfbc37 246 PANTHER PTHR30251:SF7 1 245 1.3E-116 T 22-04-2016 YE2668 670b553e39f56081f46c5fc9cacfbc37 246 SUPERFAMILY SSF49584 137 237 3.14E-14 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YE2668 670b553e39f56081f46c5fc9cacfbc37 246 SUPERFAMILY SSF49354 16 143 4.71E-40 T 22-04-2016 IPR008962 PapD-like YE2668 670b553e39f56081f46c5fc9cacfbc37 246 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 20 143 4.0E-41 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 YE3611 b7ae164c792157f15608c372dea2aef0 253 SMART SM00862 42 117 9.8E-12 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YE3611 b7ae164c792157f15608c372dea2aef0 253 SUPERFAMILY SSF46894 22 117 8.79E-17 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YE3611 b7ae164c792157f15608c372dea2aef0 253 PANTHER PTHR26402 23 217 2.3E-21 T 22-04-2016 YE3611 b7ae164c792157f15608c372dea2aef0 253 Pfam PF00486 Transcriptional regulatory protein, C terminal 44 117 3.9E-16 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YE3611 b7ae164c792157f15608c372dea2aef0 253 Gene3D G3DSA:1.10.10.10 24 118 7.0E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3611 b7ae164c792157f15608c372dea2aef0 253 PANTHER PTHR26402:SF531 23 217 2.3E-21 T 22-04-2016 YE0628 23beb2e7f9cdeabadb54cdf974b44a4d 292 PIRSF PIRSF000903 1 275 1.7E-121 T 22-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 YE0628 23beb2e7f9cdeabadb54cdf974b44a4d 292 SUPERFAMILY SSF56300 1 261 1.83E-57 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like YE0628 23beb2e7f9cdeabadb54cdf974b44a4d 292 PANTHER PTHR24032 1 281 5.7E-177 T 22-04-2016 YE0628 23beb2e7f9cdeabadb54cdf974b44a4d 292 PANTHER PTHR24032:SF27 1 281 5.7E-177 T 22-04-2016 YE0628 23beb2e7f9cdeabadb54cdf974b44a4d 292 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 271 2.9E-149 T 22-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 YE0628 23beb2e7f9cdeabadb54cdf974b44a4d 292 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 271 51.478 T 22-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 YE0628 23beb2e7f9cdeabadb54cdf974b44a4d 292 Pfam PF00149 Calcineurin-like phosphoesterase 2 139 8.1E-14 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 YE0628 23beb2e7f9cdeabadb54cdf974b44a4d 292 Gene3D G3DSA:3.60.21.10 169 277 2.4E-55 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like YE0628 23beb2e7f9cdeabadb54cdf974b44a4d 292 Gene3D G3DSA:3.60.21.10 1 132 2.4E-55 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like YE2809 499946cf8318f543b64e3ab28fd69f29 180 PANTHER PTHR11938 1 107 1.3E-61 T 22-04-2016 YE2809 499946cf8318f543b64e3ab28fd69f29 180 PANTHER PTHR11938 123 151 1.3E-61 T 22-04-2016 YE2809 499946cf8318f543b64e3ab28fd69f29 180 Pfam PF13247 4Fe-4S dicluster domain 56 108 5.4E-8 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YE2809 499946cf8318f543b64e3ab28fd69f29 180 SUPERFAMILY SSF54862 1 169 1.34E-41 T 22-04-2016 YE2809 499946cf8318f543b64e3ab28fd69f29 180 PANTHER PTHR11938:SF111 1 107 1.3E-61 T 22-04-2016 YE2809 499946cf8318f543b64e3ab28fd69f29 180 PANTHER PTHR11938:SF111 123 151 1.3E-61 T 22-04-2016 YE2809 499946cf8318f543b64e3ab28fd69f29 180 Gene3D G3DSA:3.30.70.20 67 96 6.7E-15 T 22-04-2016 YE2809 499946cf8318f543b64e3ab28fd69f29 180 Pfam PF12800 4Fe-4S binding domain 9 22 0.16 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YE2809 499946cf8318f543b64e3ab28fd69f29 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 88 99 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YE2809 499946cf8318f543b64e3ab28fd69f29 180 Gene3D G3DSA:3.30.70.20 6 66 1.4E-10 T 22-04-2016 YE2809 499946cf8318f543b64e3ab28fd69f29 180 Gene3D G3DSA:3.30.70.20 97 166 6.6E-16 T 22-04-2016 YE3681 7ca7d943a1d82ac6d7f42e62b2c795b1 337 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 63.958 T 22-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 YE3681 7ca7d943a1d82ac6d7f42e62b2c795b1 337 Pfam PF00814 Glycoprotease family 24 307 1.7E-102 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 YE3681 7ca7d943a1d82ac6d7f42e62b2c795b1 337 SUPERFAMILY SSF53067 1 309 2.59E-43 T 22-04-2016 YE3681 7ca7d943a1d82ac6d7f42e62b2c795b1 337 PANTHER PTHR11735 1 336 2.7E-169 T 22-04-2016 YE3681 7ca7d943a1d82ac6d7f42e62b2c795b1 337 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 22-04-2016 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 YE3681 7ca7d943a1d82ac6d7f42e62b2c795b1 337 Gene3D G3DSA:3.30.420.40 1 159 2.5E-49 T 22-04-2016 YE3681 7ca7d943a1d82ac6d7f42e62b2c795b1 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 1.3E-52 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 YE3681 7ca7d943a1d82ac6d7f42e62b2c795b1 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 1.3E-52 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 YE3681 7ca7d943a1d82ac6d7f42e62b2c795b1 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 1.3E-52 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 YE3681 7ca7d943a1d82ac6d7f42e62b2c795b1 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 1.3E-52 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 YE3681 7ca7d943a1d82ac6d7f42e62b2c795b1 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 1.3E-52 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 YE3681 7ca7d943a1d82ac6d7f42e62b2c795b1 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 1.3E-52 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 YE3681 7ca7d943a1d82ac6d7f42e62b2c795b1 337 PANTHER PTHR11735:SF6 1 336 2.7E-169 T 22-04-2016 YE3681 7ca7d943a1d82ac6d7f42e62b2c795b1 337 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 306 1.0E-125 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 YE3681 7ca7d943a1d82ac6d7f42e62b2c795b1 337 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 7.9E-135 T 22-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 YE3803 bfcdbd440d47bd948706e078df92a209 162 PANTHER PTHR37484 1 162 1.8E-76 T 22-04-2016 YE3803 bfcdbd440d47bd948706e078df92a209 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 8 154 3.7E-44 T 22-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 YE3803 bfcdbd440d47bd948706e078df92a209 162 PIRSF PIRSF018472 1 162 1.6E-58 T 22-04-2016 IPR026034 Cell shape-determining protein MreD, proteobacterial type YE3803 bfcdbd440d47bd948706e078df92a209 162 Pfam PF04093 rod shape-determining protein MreD 6 154 2.6E-43 T 22-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 YE2204 b106d45e16d365b2949a2f20aeb101df 253 PANTHER PTHR24322:SF337 165 196 1.7E-99 T 22-04-2016 YE2204 b106d45e16d365b2949a2f20aeb101df 253 PANTHER PTHR24322:SF337 17 149 1.7E-99 T 22-04-2016 YE2204 b106d45e16d365b2949a2f20aeb101df 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YE2204 b106d45e16d365b2949a2f20aeb101df 253 Gene3D G3DSA:3.40.50.720 7 246 1.5E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2204 b106d45e16d365b2949a2f20aeb101df 253 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 13 199 0.0061 T 22-04-2016 YE2204 b106d45e16d365b2949a2f20aeb101df 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 7.9E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE2204 b106d45e16d365b2949a2f20aeb101df 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 7.9E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE2204 b106d45e16d365b2949a2f20aeb101df 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 7.9E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE2204 b106d45e16d365b2949a2f20aeb101df 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 7.9E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE2204 b106d45e16d365b2949a2f20aeb101df 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 7.9E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE2204 b106d45e16d365b2949a2f20aeb101df 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 7.9E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE2204 b106d45e16d365b2949a2f20aeb101df 253 SUPERFAMILY SSF51735 10 243 4.97E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2204 b106d45e16d365b2949a2f20aeb101df 253 PANTHER PTHR24322 165 196 1.7E-99 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE2204 b106d45e16d365b2949a2f20aeb101df 253 PANTHER PTHR24322 17 149 1.7E-99 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE2204 b106d45e16d365b2949a2f20aeb101df 253 Pfam PF00106 short chain dehydrogenase 14 210 3.0E-50 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE1915 34e232fd890b3151fd38a67a38674ae1 118 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.0E-52 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 YE1915 34e232fd890b3151fd38a67a38674ae1 118 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.2E-42 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 YE1915 34e232fd890b3151fd38a67a38674ae1 118 PRINTS PR00062 Ribosomal protein L20 signature 75 101 1.2E-42 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 YE1915 34e232fd890b3151fd38a67a38674ae1 118 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.2E-42 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 YE1915 34e232fd890b3151fd38a67a38674ae1 118 SUPERFAMILY SSF74731 3 117 1.19E-50 T 22-04-2016 YE1915 34e232fd890b3151fd38a67a38674ae1 118 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 3.0E-14 T 22-04-2016 YE1915 34e232fd890b3151fd38a67a38674ae1 118 Pfam PF00453 Ribosomal protein L20 3 109 3.0E-49 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 YE1915 34e232fd890b3151fd38a67a38674ae1 118 PANTHER PTHR10986 2 117 3.3E-67 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 YE1915 34e232fd890b3151fd38a67a38674ae1 118 PANTHER PTHR10986:SF12 2 117 3.3E-67 T 22-04-2016 YE1915 34e232fd890b3151fd38a67a38674ae1 118 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 YE1915 34e232fd890b3151fd38a67a38674ae1 118 Gene3D G3DSA:1.10.1900.20 55 117 4.7E-31 T 22-04-2016 YE1915 34e232fd890b3151fd38a67a38674ae1 118 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.795 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 YE3153 f7ced7c1fb15a1fa756d172ba2167c70 84 PIRSF PIRSF006488 2 84 2.1E-24 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 YE3153 f7ced7c1fb15a1fa756d172ba2167c70 84 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 14 74 16.09 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 YE3153 f7ced7c1fb15a1fa756d172ba2167c70 84 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 14 69 2.0E-22 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 YE3153 f7ced7c1fb15a1fa756d172ba2167c70 84 PANTHER PTHR34137 2 84 3.9E-29 T 22-04-2016 YE3153 f7ced7c1fb15a1fa756d172ba2167c70 84 Pfam PF02609 Exonuclease VII small subunit 15 65 9.4E-20 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 YE3153 f7ced7c1fb15a1fa756d172ba2167c70 84 Gene3D G3DSA:1.10.287.1040 10 82 2.5E-28 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 YE3153 f7ced7c1fb15a1fa756d172ba2167c70 84 SUPERFAMILY SSF116842 9 77 4.58E-21 T 22-04-2016 YE3153 f7ced7c1fb15a1fa756d172ba2167c70 84 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 54 1.0E-15 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 YE2154 8e94fb086061dfdf9068ebb9e4e9cc74 215 Hamap MF_00157 Ribonuclease T [rnt]. 1 215 117.764 T 22-04-2016 IPR005987 Ribonuclease T GO:0004540|GO:0006396 YE2154 8e94fb086061dfdf9068ebb9e4e9cc74 215 SUPERFAMILY SSF53098 9 207 2.6E-58 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE2154 8e94fb086061dfdf9068ebb9e4e9cc74 215 SMART SM00479 18 203 3.2E-40 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III YE2154 8e94fb086061dfdf9068ebb9e4e9cc74 215 Pfam PF00929 Exonuclease 20 194 1.0E-37 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III YE2154 8e94fb086061dfdf9068ebb9e4e9cc74 215 TIGRFAM TIGR01298 RNaseT: ribonuclease T 10 208 3.5E-106 T 22-04-2016 IPR005987 Ribonuclease T GO:0004540|GO:0006396 YE2154 8e94fb086061dfdf9068ebb9e4e9cc74 215 Gene3D G3DSA:3.30.420.10 10 208 4.3E-59 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE2154 8e94fb086061dfdf9068ebb9e4e9cc74 215 PANTHER PTHR30231 7 213 1.1E-119 T 22-04-2016 YE2154 8e94fb086061dfdf9068ebb9e4e9cc74 215 PANTHER PTHR30231:SF2 7 213 1.1E-119 T 22-04-2016 YE1780 fc3f94ffff92d767e466d1b125f884bb 195 Pfam PF00293 NUDIX domain 35 140 6.1E-14 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 YE1780 fc3f94ffff92d767e466d1b125f884bb 195 Hamap MF_01592 Uncharacterized Nudix hydrolase NudL [nudL]. 6 195 50.755 T 22-04-2016 IPR023735 Uncharacterised nudix hydrolase NudL GO:0016818 YE1780 fc3f94ffff92d767e466d1b125f884bb 195 SUPERFAMILY SSF55811 16 186 3.52E-33 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YE1780 fc3f94ffff92d767e466d1b125f884bb 195 PANTHER PTHR12992 36 193 1.8E-54 T 22-04-2016 YE1780 fc3f94ffff92d767e466d1b125f884bb 195 ProSitePatterns PS01293 Nudix CoA signature. 52 72 - T 22-04-2016 IPR000059 NUDIX hydrolase, NudL, conserved site GO:0000287|GO:0009132|GO:0016818|GO:0030145 YE1780 fc3f94ffff92d767e466d1b125f884bb 195 Gene3D G3DSA:3.90.79.10 33 193 9.8E-38 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YE0065 fbbf586ef666696b4990ee4251ee5023 55 PANTHER PTHR15238 1 55 1.0E-25 T 22-04-2016 YE0065 fbbf586ef666696b4990ee4251ee5023 55 Pfam PF00471 Ribosomal protein L33 7 53 8.7E-19 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0065 fbbf586ef666696b4990ee4251ee5023 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 15.908 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0065 fbbf586ef666696b4990ee4251ee5023 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 8.4E-28 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0065 fbbf586ef666696b4990ee4251ee5023 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 22-04-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0065 fbbf586ef666696b4990ee4251ee5023 55 SUPERFAMILY SSF57829 1 53 3.72E-20 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 YE1735 1242a6249248c103614cf2f1197db267 132 Gene3D G3DSA:1.10.10.60 15 100 2.7E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE1735 1242a6249248c103614cf2f1197db267 132 Pfam PF13518 Helix-turn-helix domain 16 55 9.9E-6 T 22-04-2016 YE1735 1242a6249248c103614cf2f1197db267 132 SUPERFAMILY SSF48295 4 62 4.08E-13 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 YE3293 1242a6249248c103614cf2f1197db267 132 Gene3D G3DSA:1.10.10.60 15 100 2.7E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE3293 1242a6249248c103614cf2f1197db267 132 Pfam PF13518 Helix-turn-helix domain 16 55 9.9E-6 T 22-04-2016 YE3293 1242a6249248c103614cf2f1197db267 132 SUPERFAMILY SSF48295 4 62 4.08E-13 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 YE0304 1242a6249248c103614cf2f1197db267 132 Gene3D G3DSA:1.10.10.60 15 100 2.7E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE0304 1242a6249248c103614cf2f1197db267 132 Pfam PF13518 Helix-turn-helix domain 16 55 9.9E-6 T 22-04-2016 YE0304 1242a6249248c103614cf2f1197db267 132 SUPERFAMILY SSF48295 4 62 4.08E-13 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 YE3169 1242a6249248c103614cf2f1197db267 132 Gene3D G3DSA:1.10.10.60 15 100 2.7E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE3169 1242a6249248c103614cf2f1197db267 132 Pfam PF13518 Helix-turn-helix domain 16 55 9.9E-6 T 22-04-2016 YE3169 1242a6249248c103614cf2f1197db267 132 SUPERFAMILY SSF48295 4 62 4.08E-13 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 YE1127 88a984fb81f05f7273830f2f29f3ed58 347 Pfam PF00586 AIR synthase related protein, N-terminal domain 64 164 2.5E-16 T 22-04-2016 IPR016188 PurM-like, N-terminal domain YE1127 88a984fb81f05f7273830f2f29f3ed58 347 SUPERFAMILY SSF55326 7 170 5.23E-53 T 22-04-2016 YE1127 88a984fb81f05f7273830f2f29f3ed58 347 SUPERFAMILY SSF56042 171 342 7.03E-63 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain YE1127 88a984fb81f05f7273830f2f29f3ed58 347 Gene3D G3DSA:3.30.1330.10 22 170 1.1E-63 T 22-04-2016 IPR016188 PurM-like, N-terminal domain YE1127 88a984fb81f05f7273830f2f29f3ed58 347 Pfam PF02769 AIR synthase related protein, C-terminal domain 177 341 7.4E-38 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain YE1127 88a984fb81f05f7273830f2f29f3ed58 347 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 7 334 3.6E-152 T 22-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 YE1127 88a984fb81f05f7273830f2f29f3ed58 347 PANTHER PTHR10520 4 346 8.5E-230 T 22-04-2016 YE1127 88a984fb81f05f7273830f2f29f3ed58 347 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 7 345 47.231 T 22-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 YE1127 88a984fb81f05f7273830f2f29f3ed58 347 Gene3D G3DSA:3.90.650.10 171 344 2.1E-68 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain YE4067 8c5a5c6774ea47248bd6c34034f5c734 430 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 2 428 38.859 T 22-04-2016 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 YE4067 8c5a5c6774ea47248bd6c34034f5c734 430 Pfam PF00375 Sodium:dicarboxylate symporter family 9 401 1.6E-114 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YE4067 8c5a5c6774ea47248bd6c34034f5c734 430 PANTHER PTHR11958:SF49 7 423 1.0E-267 T 22-04-2016 YE4067 8c5a5c6774ea47248bd6c34034f5c734 430 Gene3D G3DSA:1.10.3860.10 7 406 2.2E-119 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YE4067 8c5a5c6774ea47248bd6c34034f5c734 430 SUPERFAMILY SSF118215 9 401 3.4E-122 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YE4067 8c5a5c6774ea47248bd6c34034f5c734 430 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 295 318 - T 22-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 YE4067 8c5a5c6774ea47248bd6c34034f5c734 430 PANTHER PTHR11958 7 423 1.0E-267 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YE4067 8c5a5c6774ea47248bd6c34034f5c734 430 PRINTS PR00173 Glutamate-aspartate symporter signature 74 99 7.1E-30 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YE4067 8c5a5c6774ea47248bd6c34034f5c734 430 PRINTS PR00173 Glutamate-aspartate symporter signature 192 211 7.1E-30 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YE4067 8c5a5c6774ea47248bd6c34034f5c734 430 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 7.1E-30 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YE4067 8c5a5c6774ea47248bd6c34034f5c734 430 PRINTS PR00173 Glutamate-aspartate symporter signature 327 346 7.1E-30 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YE4067 8c5a5c6774ea47248bd6c34034f5c734 430 PRINTS PR00173 Glutamate-aspartate symporter signature 145 167 7.1E-30 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YE4067 8c5a5c6774ea47248bd6c34034f5c734 430 PRINTS PR00173 Glutamate-aspartate symporter signature 292 318 7.1E-30 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YE4067 8c5a5c6774ea47248bd6c34034f5c734 430 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 36 51 - T 22-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 YE0802 7423ed8fa43af29f29b614f6ab2daf10 219 PANTHER PTHR30614 1 219 3.2E-70 T 22-04-2016 YE0802 7423ed8fa43af29f29b614f6ab2daf10 219 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 109 6.1E-23 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 YE0802 7423ed8fa43af29f29b614f6ab2daf10 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 214 6.2E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE0802 7423ed8fa43af29f29b614f6ab2daf10 219 Gene3D G3DSA:1.10.3720.10 12 215 4.6E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE0802 7423ed8fa43af29f29b614f6ab2daf10 219 SUPERFAMILY SSF161098 13 200 8.24E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE3783 69eb102b43400ecc3e7d03a681a19551 258 Pfam PF14188 Domain of unknown function (DUF4311) 25 236 2.9E-122 T 22-04-2016 IPR020042 Protein of unknown function DUF4311 YE3783 69eb102b43400ecc3e7d03a681a19551 258 TIGRFAM TIGR03580 EF_0832: conserved hypothetical protein EF_0832/AHA_3913 2 258 3.4E-152 T 22-04-2016 IPR020042 Protein of unknown function DUF4311 YE0108 bb6771b05610c864405846880c79e257 732 SUPERFAMILY SSF52540 220 440 8.71E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0108 bb6771b05610c864405846880c79e257 732 SUPERFAMILY SSF52540 503 601 8.71E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0108 bb6771b05610c864405846880c79e257 732 Gene3D G3DSA:3.40.50.300 198 381 9.5E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0108 bb6771b05610c864405846880c79e257 732 Pfam PF00270 DEAD/DEAH box helicase 219 364 8.1E-14 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YE0108 bb6771b05610c864405846880c79e257 732 TIGRFAM TIGR00595 priA: primosomal protein N' 221 730 3.8E-205 T 22-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 YE0108 bb6771b05610c864405846880c79e257 732 PANTHER PTHR30580 1 731 8.7E-293 T 22-04-2016 YE0108 bb6771b05610c864405846880c79e257 732 Pfam PF00271 Helicase conserved C-terminal domain 522 589 2.3E-5 T 22-04-2016 IPR001650 Helicase, C-terminal YE0108 bb6771b05610c864405846880c79e257 732 Hamap MF_00983 Probable primosomal protein N' [priA]. 6 732 25.502 T 22-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 YE0108 bb6771b05610c864405846880c79e257 732 Gene3D G3DSA:3.40.50.300 456 632 2.0E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0108 bb6771b05610c864405846880c79e257 732 SMART SM00490 492 589 1.1E-7 T 22-04-2016 IPR001650 Helicase, C-terminal YE0108 bb6771b05610c864405846880c79e257 732 SMART SM00487 195 391 5.2E-17 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain YE2022 a4a7f5956bdffc8e1cc2537876a893f8 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 4.2E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE2022 a4a7f5956bdffc8e1cc2537876a893f8 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 4.2E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE2022 a4a7f5956bdffc8e1cc2537876a893f8 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 4.2E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE2022 a4a7f5956bdffc8e1cc2537876a893f8 303 SUPERFAMILY SSF46785 4 87 8.18E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2022 a4a7f5956bdffc8e1cc2537876a893f8 303 Pfam PF03466 LysR substrate binding domain 89 294 5.6E-43 T 22-04-2016 IPR005119 LysR, substrate-binding YE2022 a4a7f5956bdffc8e1cc2537876a893f8 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 6.1E-22 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE2022 a4a7f5956bdffc8e1cc2537876a893f8 303 Gene3D G3DSA:1.10.10.10 4 87 3.2E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2022 a4a7f5956bdffc8e1cc2537876a893f8 303 SUPERFAMILY SSF53850 90 296 4.89E-38 T 22-04-2016 YE2022 a4a7f5956bdffc8e1cc2537876a893f8 303 PANTHER PTHR30346 1 294 5.9E-106 T 22-04-2016 YE2022 a4a7f5956bdffc8e1cc2537876a893f8 303 Gene3D G3DSA:3.40.190.10 90 173 2.3E-26 T 22-04-2016 YE2022 a4a7f5956bdffc8e1cc2537876a893f8 303 PANTHER PTHR30346:SF7 1 294 5.9E-106 T 22-04-2016 YE2022 a4a7f5956bdffc8e1cc2537876a893f8 303 Gene3D G3DSA:3.40.190.10 174 271 4.0E-31 T 22-04-2016 YE4100 f54018a72739537c9774e3f51aabc76e 731 Gene3D G3DSA:3.20.20.80 33 399 8.0E-77 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 YE4100 f54018a72739537c9774e3f51aabc76e 731 SUPERFAMILY SSF49265 397 499 5.68E-5 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 YE4100 f54018a72739537c9774e3f51aabc76e 731 SUPERFAMILY SSF51445 33 359 1.24E-41 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YE4100 f54018a72739537c9774e3f51aabc76e 731 PANTHER PTHR31451:SF1 86 433 1.5E-44 T 22-04-2016 YE4100 f54018a72739537c9774e3f51aabc76e 731 PANTHER PTHR31451:SF1 1 69 1.5E-44 T 22-04-2016 YE4100 f54018a72739537c9774e3f51aabc76e 731 Pfam PF16990 Carbohydrate binding module (family 35) 613 730 4.7E-30 T 22-04-2016 IPR005084 Carbohydrate binding module family 6 GO:0030246 YE4100 f54018a72739537c9774e3f51aabc76e 731 SUPERFAMILY SSF49785 628 728 1.6E-7 T 22-04-2016 IPR008979 Galactose-binding domain-like YE4100 f54018a72739537c9774e3f51aabc76e 731 PANTHER PTHR31451 86 433 1.5E-44 T 22-04-2016 YE4100 f54018a72739537c9774e3f51aabc76e 731 PANTHER PTHR31451 1 69 1.5E-44 T 22-04-2016 YE4100 f54018a72739537c9774e3f51aabc76e 731 Gene3D G3DSA:2.60.40.10 412 498 2.3E-7 T 22-04-2016 IPR013783 Immunoglobulin-like fold YE4100 f54018a72739537c9774e3f51aabc76e 731 Gene3D G3DSA:2.60.120.260 627 729 5.2E-9 T 22-04-2016 IPR008979 Galactose-binding domain-like YE1770 35a0de1d4aa022de710a6cab6a21ab79 691 Pfam PF13426 PAS domain 278 380 4.7E-11 T 22-04-2016 IPR000014 PAS domain YE1770 35a0de1d4aa022de710a6cab6a21ab79 691 Pfam PF13426 PAS domain 22 124 1.6E-13 T 22-04-2016 IPR000014 PAS domain YE1770 35a0de1d4aa022de710a6cab6a21ab79 691 Pfam PF00990 Diguanylate cyclase, GGDEF domain 530 686 7.2E-46 T 22-04-2016 IPR000160 GGDEF domain YE1770 35a0de1d4aa022de710a6cab6a21ab79 691 SUPERFAMILY SSF55785 22 134 6.28E-23 T 22-04-2016 IPR000014 PAS domain YE1770 35a0de1d4aa022de710a6cab6a21ab79 691 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 526 688 4.3E-43 T 22-04-2016 IPR000160 GGDEF domain YE1770 35a0de1d4aa022de710a6cab6a21ab79 691 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 263 388 1.4E-15 T 22-04-2016 IPR000014 PAS domain YE1770 35a0de1d4aa022de710a6cab6a21ab79 691 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 10 132 3.2E-19 T 22-04-2016 IPR000014 PAS domain YE1770 35a0de1d4aa022de710a6cab6a21ab79 691 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 133 260 1.4E-22 T 22-04-2016 IPR000014 PAS domain YE1770 35a0de1d4aa022de710a6cab6a21ab79 691 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 397 526 9.7E-15 T 22-04-2016 IPR000014 PAS domain YE1770 35a0de1d4aa022de710a6cab6a21ab79 691 PANTHER PTHR24423:SF544 540 557 4.7E-49 T 22-04-2016 YE1770 35a0de1d4aa022de710a6cab6a21ab79 691 Gene3D G3DSA:3.30.450.20 251 376 9.0E-26 T 22-04-2016 YE1770 35a0de1d4aa022de710a6cab6a21ab79 691 Gene3D G3DSA:3.30.450.20 123 250 3.9E-26 T 22-04-2016 YE1770 35a0de1d4aa022de710a6cab6a21ab79 691 SMART SM00086 339 381 0.067 T 22-04-2016 IPR001610 PAC motif YE1770 35a0de1d4aa022de710a6cab6a21ab79 691 SMART SM00086 481 519 46.0 T 22-04-2016 IPR001610 PAC motif YE1770 35a0de1d4aa022de710a6cab6a21ab79 691 SMART SM00086 83 125 3.4 T 22-04-2016 IPR001610 PAC motif YE1770 35a0de1d4aa022de710a6cab6a21ab79 691 SMART SM00086 211 253 0.07 T 22-04-2016 IPR001610 PAC motif YE1770 35a0de1d4aa022de710a6cab6a21ab79 691 SMART SM00267 519 690 9.7E-56 T 22-04-2016 IPR000160 GGDEF domain YE1770 35a0de1d4aa022de710a6cab6a21ab79 691 Pfam PF00989 PAS fold 400 516 1.0E-14 T 22-04-2016 IPR013767 PAS fold GO:0006355 YE1770 35a0de1d4aa022de710a6cab6a21ab79 691 PANTHER PTHR24423 10 379 4.7E-49 T 22-04-2016 YE1770 35a0de1d4aa022de710a6cab6a21ab79 691 SUPERFAMILY SSF55073 535 687 2.2E-45 T 22-04-2016 IPR029787 Nucleotide cyclase YE1770 35a0de1d4aa022de710a6cab6a21ab79 691 SUPERFAMILY SSF55785 249 376 3.66E-28 T 22-04-2016 IPR000014 PAS domain YE1770 35a0de1d4aa022de710a6cab6a21ab79 691 PANTHER PTHR24423:SF544 10 379 4.7E-49 T 22-04-2016 YE1770 35a0de1d4aa022de710a6cab6a21ab79 691 SMART SM00091 265 333 0.0034 T 22-04-2016 IPR000014 PAS domain YE1770 35a0de1d4aa022de710a6cab6a21ab79 691 SMART SM00091 138 206 4.1E-4 T 22-04-2016 IPR000014 PAS domain YE1770 35a0de1d4aa022de710a6cab6a21ab79 691 SMART SM00091 400 466 1.0E-8 T 22-04-2016 IPR000014 PAS domain YE1770 35a0de1d4aa022de710a6cab6a21ab79 691 SMART SM00091 9 78 1.5E-5 T 22-04-2016 IPR000014 PAS domain YE1770 35a0de1d4aa022de710a6cab6a21ab79 691 Pfam PF08448 PAS fold 150 255 5.4E-14 T 22-04-2016 IPR013656 PAS fold-4 YE1770 35a0de1d4aa022de710a6cab6a21ab79 691 Gene3D G3DSA:3.30.70.270 531 688 4.4E-52 T 22-04-2016 YE1770 35a0de1d4aa022de710a6cab6a21ab79 691 SUPERFAMILY SSF55785 121 248 2.54E-25 T 22-04-2016 IPR000014 PAS domain YE1770 35a0de1d4aa022de710a6cab6a21ab79 691 SUPERFAMILY SSF55785 379 517 8.03E-19 T 22-04-2016 IPR000014 PAS domain YE1770 35a0de1d4aa022de710a6cab6a21ab79 691 Gene3D G3DSA:3.30.450.20 379 517 2.0E-22 T 22-04-2016 YE1770 35a0de1d4aa022de710a6cab6a21ab79 691 PANTHER PTHR24423 540 557 4.7E-49 T 22-04-2016 YE1770 35a0de1d4aa022de710a6cab6a21ab79 691 Gene3D G3DSA:3.30.450.20 11 122 2.2E-21 T 22-04-2016 YE2164 a582c8c7745c1325ef1a7ec113431214 470 PRINTS PR01050 Pyruvate kinase family signature 186 200 3.8E-77 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YE2164 a582c8c7745c1325ef1a7ec113431214 470 PRINTS PR01050 Pyruvate kinase family signature 294 312 3.8E-77 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YE2164 a582c8c7745c1325ef1a7ec113431214 470 PRINTS PR01050 Pyruvate kinase family signature 269 293 3.8E-77 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YE2164 a582c8c7745c1325ef1a7ec113431214 470 PRINTS PR01050 Pyruvate kinase family signature 59 75 3.8E-77 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YE2164 a582c8c7745c1325ef1a7ec113431214 470 PRINTS PR01050 Pyruvate kinase family signature 217 243 3.8E-77 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YE2164 a582c8c7745c1325ef1a7ec113431214 470 PRINTS PR01050 Pyruvate kinase family signature 244 268 3.8E-77 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YE2164 a582c8c7745c1325ef1a7ec113431214 470 PRINTS PR01050 Pyruvate kinase family signature 313 329 3.8E-77 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YE2164 a582c8c7745c1325ef1a7ec113431214 470 SUPERFAMILY SSF50800 70 167 3.84E-29 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain YE2164 a582c8c7745c1325ef1a7ec113431214 470 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 469 8.2E-186 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YE2164 a582c8c7745c1325ef1a7ec113431214 470 Pfam PF00224 Pyruvate kinase, barrel domain 1 341 4.2E-153 T 22-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YE2164 a582c8c7745c1325ef1a7ec113431214 470 Gene3D G3DSA:3.20.20.60 169 326 2.2E-115 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YE2164 a582c8c7745c1325ef1a7ec113431214 470 Gene3D G3DSA:3.20.20.60 2 72 2.2E-115 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YE2164 a582c8c7745c1325ef1a7ec113431214 470 Gene3D G3DSA:3.40.1380.20 327 468 5.0E-43 T 22-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YE2164 a582c8c7745c1325ef1a7ec113431214 470 SUPERFAMILY SSF52935 323 469 5.36E-34 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YE2164 a582c8c7745c1325ef1a7ec113431214 470 SUPERFAMILY SSF51621 1 74 1.64E-101 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YE2164 a582c8c7745c1325ef1a7ec113431214 470 SUPERFAMILY SSF51621 156 338 1.64E-101 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YE2164 a582c8c7745c1325ef1a7ec113431214 470 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 468 3.0E-27 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YE2164 a582c8c7745c1325ef1a7ec113431214 470 PANTHER PTHR11817 1 464 8.0E-254 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YE2164 a582c8c7745c1325ef1a7ec113431214 470 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 22-04-2016 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YE2164 a582c8c7745c1325ef1a7ec113431214 470 Gene3D G3DSA:2.40.33.10 73 168 5.0E-32 T 22-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YE1125 b19cd42bb869eb336e8b8fec3d7c4166 212 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 31.867 T 22-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 YE1125 b19cd42bb869eb336e8b8fec3d7c4166 212 SUPERFAMILY SSF53328 2 207 8.24E-70 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YE1125 b19cd42bb869eb336e8b8fec3d7c4166 212 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 22-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YE1125 b19cd42bb869eb336e8b8fec3d7c4166 212 Pfam PF00551 Formyl transferase 2 182 1.4E-67 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YE1125 b19cd42bb869eb336e8b8fec3d7c4166 212 Gene3D G3DSA:3.40.50.170 2 205 1.1E-72 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YE1125 b19cd42bb869eb336e8b8fec3d7c4166 212 PANTHER PTHR10520 1 194 8.5E-115 T 22-04-2016 YE1125 b19cd42bb869eb336e8b8fec3d7c4166 212 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 192 5.1E-80 T 22-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 YE4206 cc49e8b8d15fab9d192560c200530a47 460 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 72 1.6E-21 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YE4206 cc49e8b8d15fab9d192560c200530a47 460 Gene3D G3DSA:1.10.1140.10 345 460 1.0E-56 T 22-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YE4206 cc49e8b8d15fab9d192560c200530a47 460 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 333 342 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YE4206 cc49e8b8d15fab9d192560c200530a47 460 SUPERFAMILY SSF50615 1 75 3.66E-25 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YE4206 cc49e8b8d15fab9d192560c200530a47 460 PANTHER PTHR15184:SF44 1 460 0.0 T 22-04-2016 YE4206 cc49e8b8d15fab9d192560c200530a47 460 Gene3D G3DSA:2.40.10.170 2 75 2.6E-31 T 22-04-2016 YE4206 cc49e8b8d15fab9d192560c200530a47 460 SUPERFAMILY SSF47917 345 459 2.09E-55 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YE4206 cc49e8b8d15fab9d192560c200530a47 460 PANTHER PTHR15184 1 460 0.0 T 22-04-2016 YE4206 cc49e8b8d15fab9d192560c200530a47 460 SMART SM00382 142 405 1.2E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain YE4206 cc49e8b8d15fab9d192560c200530a47 460 Gene3D G3DSA:3.40.50.300 77 343 1.0E-107 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE4206 cc49e8b8d15fab9d192560c200530a47 460 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 460 56.737 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YE4206 cc49e8b8d15fab9d192560c200530a47 460 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 460 3.1E-262 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YE4206 cc49e8b8d15fab9d192560c200530a47 460 SUPERFAMILY SSF52540 77 348 6.64E-90 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE4206 cc49e8b8d15fab9d192560c200530a47 460 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 130 342 5.2E-63 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YE0067 0477e4bbff5ff4c63b6eb67e0c3dd420 159 PANTHER PTHR21342 1 159 2.3E-82 T 22-04-2016 YE0067 0477e4bbff5ff4c63b6eb67e0c3dd420 159 Gene3D G3DSA:3.40.50.620 3 157 4.1E-53 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YE0067 0477e4bbff5ff4c63b6eb67e0c3dd420 159 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 35.033 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 YE0067 0477e4bbff5ff4c63b6eb67e0c3dd420 159 SUPERFAMILY SSF52374 4 156 1.69E-43 T 22-04-2016 YE0067 0477e4bbff5ff4c63b6eb67e0c3dd420 159 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 5 157 1.9E-57 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 YE0067 0477e4bbff5ff4c63b6eb67e0c3dd420 159 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 59 9.4E-15 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 YE0067 0477e4bbff5ff4c63b6eb67e0c3dd420 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 1.5E-46 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 YE0067 0477e4bbff5ff4c63b6eb67e0c3dd420 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 1.5E-46 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 YE0067 0477e4bbff5ff4c63b6eb67e0c3dd420 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 1.5E-46 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 YE0067 0477e4bbff5ff4c63b6eb67e0c3dd420 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 1.5E-46 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 YE0067 0477e4bbff5ff4c63b6eb67e0c3dd420 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 1.5E-46 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 YE0067 0477e4bbff5ff4c63b6eb67e0c3dd420 159 Pfam PF01467 Cytidylyltransferase-like 6 134 2.3E-22 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 YE0067 0477e4bbff5ff4c63b6eb67e0c3dd420 159 PANTHER PTHR21342:SF1 1 159 2.3E-82 T 22-04-2016 YE0067 0477e4bbff5ff4c63b6eb67e0c3dd420 159 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 12 77 6.0E-4 T 22-04-2016 YE1934 abc55c44ae093222ae1a10c9ab9beda2 494 PANTHER PTHR11819:SF148 4 486 3.4E-191 T 22-04-2016 YE1934 abc55c44ae093222ae1a10c9ab9beda2 494 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 437 5.8E-121 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 YE1934 abc55c44ae093222ae1a10c9ab9beda2 494 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 419 439 - T 22-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 YE1934 abc55c44ae093222ae1a10c9ab9beda2 494 Pfam PF00474 Sodium:solute symporter family 35 437 1.6E-138 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 YE1934 abc55c44ae093222ae1a10c9ab9beda2 494 PANTHER PTHR11819 4 486 3.4E-191 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 YE1934 abc55c44ae093222ae1a10c9ab9beda2 494 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 6 490 7.7E-226 T 22-04-2016 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 YE0043 f22239df1fd480b9f8edde2477fb4b2c 693 Gene3D G3DSA:3.40.50.300 254 453 1.6E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0043 f22239df1fd480b9f8edde2477fb4b2c 693 SMART SM00490 505 589 2.0E-21 T 22-04-2016 IPR001650 Helicase, C-terminal YE0043 f22239df1fd480b9f8edde2477fb4b2c 693 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 29 664 9.2E-244 T 22-04-2016 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 YE0043 f22239df1fd480b9f8edde2477fb4b2c 693 Gene3D G3DSA:2.40.50.140 47 139 3.0E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE0043 f22239df1fd480b9f8edde2477fb4b2c 693 PANTHER PTHR24031:SF249 299 603 5.6E-125 T 22-04-2016 YE0043 f22239df1fd480b9f8edde2477fb4b2c 693 PANTHER PTHR24031:SF249 19 52 5.6E-125 T 22-04-2016 YE0043 f22239df1fd480b9f8edde2477fb4b2c 693 PANTHER PTHR24031:SF249 194 282 5.6E-125 T 22-04-2016 YE0043 f22239df1fd480b9f8edde2477fb4b2c 693 PANTHER PTHR24031:SF249 655 689 5.6E-125 T 22-04-2016 YE0043 f22239df1fd480b9f8edde2477fb4b2c 693 SMART SM00487 265 459 1.5E-30 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain YE0043 f22239df1fd480b9f8edde2477fb4b2c 693 Gene3D G3DSA:1.10.150.20 5 37 1.1E-4 T 22-04-2016 YE0043 f22239df1fd480b9f8edde2477fb4b2c 693 Gene3D G3DSA:3.40.50.300 454 638 1.1E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0043 f22239df1fd480b9f8edde2477fb4b2c 693 Pfam PF00270 DEAD/DEAH box helicase 272 431 2.6E-19 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YE0043 f22239df1fd480b9f8edde2477fb4b2c 693 SUPERFAMILY SSF50249 9 174 1.11E-42 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE0043 f22239df1fd480b9f8edde2477fb4b2c 693 SUPERFAMILY SSF52540 208 453 2.24E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0043 f22239df1fd480b9f8edde2477fb4b2c 693 SUPERFAMILY SSF52540 508 653 2.3E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0043 f22239df1fd480b9f8edde2477fb4b2c 693 SUPERFAMILY SSF52540 292 342 2.3E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0043 f22239df1fd480b9f8edde2477fb4b2c 693 Pfam PF17191 RecG wedge domain 14 172 1.7E-22 T 22-04-2016 IPR033454 RecG, wedge domain YE0043 f22239df1fd480b9f8edde2477fb4b2c 693 PANTHER PTHR24031 299 603 5.6E-125 T 22-04-2016 YE0043 f22239df1fd480b9f8edde2477fb4b2c 693 PANTHER PTHR24031 19 52 5.6E-125 T 22-04-2016 YE0043 f22239df1fd480b9f8edde2477fb4b2c 693 PANTHER PTHR24031 194 282 5.6E-125 T 22-04-2016 YE0043 f22239df1fd480b9f8edde2477fb4b2c 693 PANTHER PTHR24031 655 689 5.6E-125 T 22-04-2016 YE0043 f22239df1fd480b9f8edde2477fb4b2c 693 Pfam PF00271 Helicase conserved C-terminal domain 480 588 9.4E-18 T 22-04-2016 IPR001650 Helicase, C-terminal YE0323 c5dc7d8598df94f16cd9685651545d04 710 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 693 710 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site YE0323 c5dc7d8598df94f16cd9685651545d04 710 SUPERFAMILY SSF56935 54 710 1.67E-135 T 22-04-2016 YE0323 c5dc7d8598df94f16cd9685651545d04 710 Gene3D G3DSA:2.170.130.10 28 178 1.3E-35 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YE0323 c5dc7d8598df94f16cd9685651545d04 710 PANTHER PTHR32552:SF21 54 710 1.0E-218 T 22-04-2016 YE0323 c5dc7d8598df94f16cd9685651545d04 710 Gene3D G3DSA:2.40.170.20 182 710 5.2E-143 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YE0323 c5dc7d8598df94f16cd9685651545d04 710 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 65 710 1.3E-187 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 YE0323 c5dc7d8598df94f16cd9685651545d04 710 PANTHER PTHR32552 54 710 1.0E-218 T 22-04-2016 YE0323 c5dc7d8598df94f16cd9685651545d04 710 Pfam PF00593 TonB dependent receptor 476 708 3.4E-29 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YE0323 c5dc7d8598df94f16cd9685651545d04 710 Pfam PF07715 TonB-dependent Receptor Plug Domain 65 168 9.0E-23 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YE3333 d84d2e35201fe89659e7f347af7f896a 317 PANTHER PTHR30427:SF1 2 312 2.2E-143 T 22-04-2016 YE3333 d84d2e35201fe89659e7f347af7f896a 317 SUPERFAMILY SSF53850 95 298 2.02E-38 T 22-04-2016 YE3333 d84d2e35201fe89659e7f347af7f896a 317 Pfam PF03466 LysR substrate binding domain 93 297 1.1E-37 T 22-04-2016 IPR005119 LysR, substrate-binding YE3333 d84d2e35201fe89659e7f347af7f896a 317 Gene3D G3DSA:1.10.10.10 4 83 3.0E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3333 d84d2e35201fe89659e7f347af7f896a 317 Gene3D G3DSA:3.40.190.10 184 266 3.1E-20 T 22-04-2016 YE3333 d84d2e35201fe89659e7f347af7f896a 317 SUPERFAMILY SSF46785 3 84 1.14E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3333 d84d2e35201fe89659e7f347af7f896a 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 4.1E-14 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE3333 d84d2e35201fe89659e7f347af7f896a 317 PANTHER PTHR30427 2 312 2.2E-143 T 22-04-2016 YE3333 d84d2e35201fe89659e7f347af7f896a 317 Gene3D G3DSA:3.40.190.10 95 183 4.7E-16 T 22-04-2016 YE2845 467862475de44928729a0f0d1e1e096c 247 SMART SM00079 26 244 2.7E-7 T 22-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 YE2845 467862475de44928729a0f0d1e1e096c 247 SUPERFAMILY SSF53850 8 244 4.35E-74 T 22-04-2016 YE2845 467862475de44928729a0f0d1e1e096c 247 PANTHER PTHR18966 25 243 1.8E-62 T 22-04-2016 YE2845 467862475de44928729a0f0d1e1e096c 247 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 243 1.0E-67 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YE2845 467862475de44928729a0f0d1e1e096c 247 Gene3D G3DSA:3.40.190.10 103 206 1.9E-31 T 22-04-2016 YE2845 467862475de44928729a0f0d1e1e096c 247 Gene3D G3DSA:3.40.190.10 24 102 1.1E-45 T 22-04-2016 YE2845 467862475de44928729a0f0d1e1e096c 247 Gene3D G3DSA:3.40.190.10 207 245 1.1E-45 T 22-04-2016 YE2845 467862475de44928729a0f0d1e1e096c 247 SMART SM00062 26 245 7.6E-71 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YE2845 467862475de44928729a0f0d1e1e096c 247 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 48 61 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 YE1117 03f75eb30724ac7f92859bca9c4788fb 491 Pfam PF00571 CBS domain 244 296 1.1E-4 T 22-04-2016 IPR000644 CBS domain YE1117 03f75eb30724ac7f92859bca9c4788fb 491 PANTHER PTHR11911:SF23 155 471 2.4E-41 T 22-04-2016 YE1117 03f75eb30724ac7f92859bca9c4788fb 491 SUPERFAMILY SSF158791 63 173 2.62E-22 T 22-04-2016 YE1117 03f75eb30724ac7f92859bca9c4788fb 491 Pfam PF01769 Divalent cation transporter 362 484 9.8E-24 T 22-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 YE1117 03f75eb30724ac7f92859bca9c4788fb 491 Gene3D G3DSA:1.25.60.10 51 169 3.4E-20 T 22-04-2016 YE1117 03f75eb30724ac7f92859bca9c4788fb 491 SUPERFAMILY SSF161093 319 490 4.45E-48 T 22-04-2016 YE1117 03f75eb30724ac7f92859bca9c4788fb 491 TIGRFAM TIGR00400 mgtE: magnesium transporter 64 490 7.0E-77 T 22-04-2016 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 YE1117 03f75eb30724ac7f92859bca9c4788fb 491 PANTHER PTHR11911 155 471 2.4E-41 T 22-04-2016 YE1117 03f75eb30724ac7f92859bca9c4788fb 491 SMART SM00924 75 178 1.7E-31 T 22-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain YE1117 03f75eb30724ac7f92859bca9c4788fb 491 Gene3D G3DSA:1.10.357.20 320 490 1.0E-52 T 22-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 YE1117 03f75eb30724ac7f92859bca9c4788fb 491 Gene3D G3DSA:3.10.580.10 170 300 1.0E-14 T 22-04-2016 YE1117 03f75eb30724ac7f92859bca9c4788fb 491 Pfam PF03448 MgtE intracellular N domain 75 175 5.0E-23 T 22-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain YE1117 03f75eb30724ac7f92859bca9c4788fb 491 SUPERFAMILY SSF54631 177 316 5.82E-24 T 22-04-2016 YE3121 7b1a7ea5931c9cab48363aabd8342fcb 592 SUPERFAMILY SSF52540 336 576 9.61E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3121 7b1a7ea5931c9cab48363aabd8342fcb 592 PANTHER PTHR24221:SF256 8 584 0.0 T 22-04-2016 YE3121 7b1a7ea5931c9cab48363aabd8342fcb 592 Gene3D G3DSA:1.20.1560.10 12 323 1.1E-74 T 22-04-2016 YE3121 7b1a7ea5931c9cab48363aabd8342fcb 592 Gene3D G3DSA:3.40.50.300 341 580 4.9E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3121 7b1a7ea5931c9cab48363aabd8342fcb 592 Pfam PF00005 ABC transporter 357 505 2.4E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE3121 7b1a7ea5931c9cab48363aabd8342fcb 592 PANTHER PTHR24221 8 584 0.0 T 22-04-2016 YE3121 7b1a7ea5931c9cab48363aabd8342fcb 592 Pfam PF00664 ABC transporter transmembrane region 26 295 8.5E-43 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YE3121 7b1a7ea5931c9cab48363aabd8342fcb 592 ProSitePatterns PS00211 ABC transporters family signature. 477 491 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE3121 7b1a7ea5931c9cab48363aabd8342fcb 592 SMART SM00382 366 557 2.4E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain YE3121 7b1a7ea5931c9cab48363aabd8342fcb 592 SUPERFAMILY SSF90123 12 323 1.83E-70 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YE0535 79af476a4f9e9eb49081da98a7df4379 427 PIRSF PIRSF006356 1 425 1.8E-139 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 YE0535 79af476a4f9e9eb49081da98a7df4379 427 Hamap MF_00242 Arginine deiminase [arcA]. 11 425 46.536 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 YE0535 79af476a4f9e9eb49081da98a7df4379 427 PRINTS PR01466 Bacterial arginine deiminase signature 361 378 8.2E-47 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 YE0535 79af476a4f9e9eb49081da98a7df4379 427 PRINTS PR01466 Bacterial arginine deiminase signature 12 32 8.2E-47 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 YE0535 79af476a4f9e9eb49081da98a7df4379 427 PRINTS PR01466 Bacterial arginine deiminase signature 193 208 8.2E-47 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 YE0535 79af476a4f9e9eb49081da98a7df4379 427 PRINTS PR01466 Bacterial arginine deiminase signature 165 183 8.2E-47 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 YE0535 79af476a4f9e9eb49081da98a7df4379 427 PRINTS PR01466 Bacterial arginine deiminase signature 381 395 8.2E-47 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 YE0535 79af476a4f9e9eb49081da98a7df4379 427 PRINTS PR01466 Bacterial arginine deiminase signature 404 422 8.2E-47 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 YE0535 79af476a4f9e9eb49081da98a7df4379 427 PANTHER PTHR12737 165 309 2.7E-123 T 22-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 YE0535 79af476a4f9e9eb49081da98a7df4379 427 PANTHER PTHR12737 13 101 2.7E-123 T 22-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 YE0535 79af476a4f9e9eb49081da98a7df4379 427 PANTHER PTHR12737 328 427 2.7E-123 T 22-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 YE0535 79af476a4f9e9eb49081da98a7df4379 427 PANTHER PTHR12737:SF13 165 309 2.7E-123 T 22-04-2016 YE0535 79af476a4f9e9eb49081da98a7df4379 427 PANTHER PTHR12737:SF13 13 101 2.7E-123 T 22-04-2016 YE0535 79af476a4f9e9eb49081da98a7df4379 427 PANTHER PTHR12737:SF13 328 427 2.7E-123 T 22-04-2016 YE0535 79af476a4f9e9eb49081da98a7df4379 427 Gene3D G3DSA:3.75.10.10 10 77 6.2E-126 T 22-04-2016 YE0535 79af476a4f9e9eb49081da98a7df4379 427 Gene3D G3DSA:3.75.10.10 165 426 6.2E-126 T 22-04-2016 YE0535 79af476a4f9e9eb49081da98a7df4379 427 Pfam PF02274 Amidinotransferase 28 422 3.1E-98 T 22-04-2016 YE0535 79af476a4f9e9eb49081da98a7df4379 427 TIGRFAM TIGR01078 arcA: arginine deiminase 16 425 3.5E-153 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 YE0535 79af476a4f9e9eb49081da98a7df4379 427 SUPERFAMILY SSF55909 13 425 2.78E-128 T 22-04-2016 YE0038 57b36a193d412e1da5da35787bc884c3 228 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 204 1.3E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE0038 57b36a193d412e1da5da35787bc884c3 228 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 2.1E-5 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE0038 57b36a193d412e1da5da35787bc884c3 228 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 2.1E-5 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE0038 57b36a193d412e1da5da35787bc884c3 228 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 2.1E-5 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE0038 57b36a193d412e1da5da35787bc884c3 228 SMART SM00421 148 205 6.6E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE0038 57b36a193d412e1da5da35787bc884c3 228 Gene3D G3DSA:1.10.10.10 146 210 9.2E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0038 57b36a193d412e1da5da35787bc884c3 228 Pfam PF08448 PAS fold 16 122 7.5E-9 T 22-04-2016 IPR013656 PAS fold-4 YE0038 57b36a193d412e1da5da35787bc884c3 228 SUPERFAMILY SSF46894 143 210 2.11E-16 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YE1339 a3220e13eb5dbdd78741ffd96fc95e97 627 PANTHER PTHR10283 465 627 1.0E-249 T 22-04-2016 YE1339 a3220e13eb5dbdd78741ffd96fc95e97 627 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 575 591 - T 22-04-2016 IPR031312 Sodium/sulphate symporter, conserved site YE1339 a3220e13eb5dbdd78741ffd96fc95e97 627 PANTHER PTHR10283:SF12 291 370 1.0E-249 T 22-04-2016 YE1339 a3220e13eb5dbdd78741ffd96fc95e97 627 PANTHER PTHR10283:SF12 3 242 1.0E-249 T 22-04-2016 YE1339 a3220e13eb5dbdd78741ffd96fc95e97 627 PANTHER PTHR10283:SF12 465 627 1.0E-249 T 22-04-2016 YE1339 a3220e13eb5dbdd78741ffd96fc95e97 627 Gene3D G3DSA:3.30.70.1450 339 414 1.6E-23 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YE1339 a3220e13eb5dbdd78741ffd96fc95e97 627 Gene3D G3DSA:3.30.70.1450 249 327 1.2E-15 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YE1339 a3220e13eb5dbdd78741ffd96fc95e97 627 SUPERFAMILY SSF116726 249 306 1.18E-9 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YE1339 a3220e13eb5dbdd78741ffd96fc95e97 627 PANTHER PTHR10283 291 370 1.0E-249 T 22-04-2016 YE1339 a3220e13eb5dbdd78741ffd96fc95e97 627 PANTHER PTHR10283 3 242 1.0E-249 T 22-04-2016 YE1339 a3220e13eb5dbdd78741ffd96fc95e97 627 Pfam PF03600 Citrate transporter 32 212 1.2E-35 T 22-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 YE1339 a3220e13eb5dbdd78741ffd96fc95e97 627 Pfam PF03600 Citrate transporter 447 625 1.3E-19 T 22-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 YE1339 a3220e13eb5dbdd78741ffd96fc95e97 627 SUPERFAMILY SSF116726 338 411 2.49E-18 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YE1339 a3220e13eb5dbdd78741ffd96fc95e97 627 Pfam PF02080 TrkA-C domain 248 314 5.6E-15 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YE1339 a3220e13eb5dbdd78741ffd96fc95e97 627 Pfam PF02080 TrkA-C domain 343 410 8.4E-13 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YE3237 bc42fbba3810a5d8313290f9ce1176b0 387 PANTHER PTHR23501 1 387 9.1E-207 T 22-04-2016 YE3237 bc42fbba3810a5d8313290f9ce1176b0 387 Pfam PF07690 Major Facilitator Superfamily 7 285 3.5E-33 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YE3237 bc42fbba3810a5d8313290f9ce1176b0 387 Gene3D G3DSA:1.20.1250.20 2 181 2.3E-26 T 22-04-2016 YE3237 bc42fbba3810a5d8313290f9ce1176b0 387 Gene3D G3DSA:1.20.1250.20 207 373 1.5E-12 T 22-04-2016 YE3237 bc42fbba3810a5d8313290f9ce1176b0 387 SUPERFAMILY SSF103473 2 377 1.31E-54 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE3237 bc42fbba3810a5d8313290f9ce1176b0 387 PANTHER PTHR23501:SF79 1 387 9.1E-207 T 22-04-2016 YE0225 9b66d2264566b4d20c40b08d5abe13b3 507 PANTHER PTHR11564:SF16 199 507 1.6E-154 T 22-04-2016 YE0225 9b66d2264566b4d20c40b08d5abe13b3 507 Pfam PF02881 SRP54-type protein, helical bundle domain 220 285 5.2E-13 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 YE0225 9b66d2264566b4d20c40b08d5abe13b3 507 Gene3D G3DSA:3.40.50.300 300 503 1.8E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0225 9b66d2264566b4d20c40b08d5abe13b3 507 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 232 503 5.9E-115 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 YE0225 9b66d2264566b4d20c40b08d5abe13b3 507 Gene3D G3DSA:1.20.120.140 194 285 6.4E-36 T 22-04-2016 YE0225 9b66d2264566b4d20c40b08d5abe13b3 507 SMART SM00962 303 504 1.6E-122 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 YE0225 9b66d2264566b4d20c40b08d5abe13b3 507 SUPERFAMILY SSF47364 204 283 2.75E-22 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 YE0225 9b66d2264566b4d20c40b08d5abe13b3 507 PANTHER PTHR11564 199 507 1.6E-154 T 22-04-2016 YE0225 9b66d2264566b4d20c40b08d5abe13b3 507 SMART SM00963 209 289 4.2E-25 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 YE0225 9b66d2264566b4d20c40b08d5abe13b3 507 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 232 504 65.497 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 YE0225 9b66d2264566b4d20c40b08d5abe13b3 507 SMART SM00382 302 493 7.3E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain YE0225 9b66d2264566b4d20c40b08d5abe13b3 507 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 477 490 - T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 YE0225 9b66d2264566b4d20c40b08d5abe13b3 507 Pfam PF00448 SRP54-type protein, GTPase domain 303 503 4.2E-77 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 YE0225 9b66d2264566b4d20c40b08d5abe13b3 507 SUPERFAMILY SSF52540 300 503 1.43E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2993 4cbcdfe02fedd9d6a23111569dbf8ae6 224 SUPERFAMILY SSF161098 14 209 4.84E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE2993 4cbcdfe02fedd9d6a23111569dbf8ae6 224 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 223 2.6E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE2993 4cbcdfe02fedd9d6a23111569dbf8ae6 224 Gene3D G3DSA:1.10.3720.10 13 222 3.6E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE2993 4cbcdfe02fedd9d6a23111569dbf8ae6 224 PANTHER PTHR30614:SF1 1 222 2.5E-142 T 22-04-2016 IPR030205 Glutamate/aspartate transport system permease protein GltK/AatM GO:0006865|GO:0016021|GO:0043190 YE2993 4cbcdfe02fedd9d6a23111569dbf8ae6 224 PANTHER PTHR30614 1 222 2.5E-142 T 22-04-2016 YE2993 4cbcdfe02fedd9d6a23111569dbf8ae6 224 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 118 4.9E-24 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 YE0728 d951f3f9493f08ce1a5f29af89339ed9 768 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 3 765 0.0 T 22-04-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type YE0728 d951f3f9493f08ce1a5f29af89339ed9 768 SUPERFAMILY SSF52540 3 113 7.88E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0728 d951f3f9493f08ce1a5f29af89339ed9 768 Pfam PF00271 Helicase conserved C-terminal domain 159 281 4.2E-11 T 22-04-2016 IPR001650 Helicase, C-terminal YE0728 d951f3f9493f08ce1a5f29af89339ed9 768 Gene3D G3DSA:3.40.50.300 3 114 4.3E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0728 d951f3f9493f08ce1a5f29af89339ed9 768 SMART SM00847 342 433 1.7E-15 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 YE0728 d951f3f9493f08ce1a5f29af89339ed9 768 Gene3D G3DSA:3.40.50.300 155 301 2.8E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0728 d951f3f9493f08ce1a5f29af89339ed9 768 Pfam PF08482 ATP-dependent helicase C-terminal 621 753 1.3E-52 T 22-04-2016 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal YE0728 d951f3f9493f08ce1a5f29af89339ed9 768 SMART SM00490 180 282 6.6E-16 T 22-04-2016 IPR001650 Helicase, C-terminal YE0728 d951f3f9493f08ce1a5f29af89339ed9 768 PIRSF PIRSF005496 1 767 0.0 T 22-04-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type YE0728 d951f3f9493f08ce1a5f29af89339ed9 768 SUPERFAMILY SSF52540 132 382 1.14E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0728 d951f3f9493f08ce1a5f29af89339ed9 768 Pfam PF04408 Helicase associated domain (HA2) 343 401 1.1E-12 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 YE0728 d951f3f9493f08ce1a5f29af89339ed9 768 PANTHER PTHR18934 2 383 1.2E-144 T 22-04-2016 YE0776 6bc761a481a899945b73342048e07c73 851 Gene3D G3DSA:3.40.1170.10 4 123 2.7E-50 T 22-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 YE0776 6bc761a481a899945b73342048e07c73 851 PIRSF PIRSF037677 3 831 2.0E-151 T 22-04-2016 YE0776 6bc761a481a899945b73342048e07c73 851 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 688 704 - T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 YE0776 6bc761a481a899945b73342048e07c73 851 Gene3D G3DSA:1.10.1420.10 318 477 9.5E-54 T 22-04-2016 YE0776 6bc761a481a899945b73342048e07c73 851 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 10 843 25.292 T 22-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 YE0776 6bc761a481a899945b73342048e07c73 851 SMART SM00533 286 591 8.5E-107 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 YE0776 6bc761a481a899945b73342048e07c73 851 Pfam PF05190 MutS family domain IV 428 517 2.4E-28 T 22-04-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 YE0776 6bc761a481a899945b73342048e07c73 851 SUPERFAMILY SSF52540 567 798 5.32E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0776 6bc761a481a899945b73342048e07c73 851 Gene3D G3DSA:3.30.420.110 129 258 1.6E-43 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 YE0776 6bc761a481a899945b73342048e07c73 851 PANTHER PTHR11361:SF86 1 850 0.0 T 22-04-2016 YE0776 6bc761a481a899945b73342048e07c73 851 SUPERFAMILY SSF55271 5 116 4.19E-42 T 22-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 YE0776 6bc761a481a899945b73342048e07c73 851 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 10 848 0.0 T 22-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 YE0776 6bc761a481a899945b73342048e07c73 851 Pfam PF05192 MutS domain III 272 559 4.4E-40 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 YE0776 6bc761a481a899945b73342048e07c73 851 Pfam PF05188 MutS domain II 131 256 3.2E-34 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 YE0776 6bc761a481a899945b73342048e07c73 851 SUPERFAMILY SSF48334 270 566 7.98E-91 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 YE0776 6bc761a481a899945b73342048e07c73 851 PANTHER PTHR11361 1 850 0.0 T 22-04-2016 YE0776 6bc761a481a899945b73342048e07c73 851 Pfam PF00488 MutS domain V 610 797 1.8E-88 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 YE0776 6bc761a481a899945b73342048e07c73 851 Gene3D G3DSA:3.40.50.300 569 797 3.6E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0776 6bc761a481a899945b73342048e07c73 851 Pfam PF01624 MutS domain I 11 122 1.2E-40 T 22-04-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 YE0776 6bc761a481a899945b73342048e07c73 851 SMART SM00534 607 794 3.6E-123 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 YE0776 6bc761a481a899945b73342048e07c73 851 SUPERFAMILY SSF53150 117 269 2.88E-42 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 YE1738 079eb5935bb90abed9bca4dd6a8893c9 285 PANTHER PTHR14194:SF73 2 282 2.4E-118 T 22-04-2016 YE1738 079eb5935bb90abed9bca4dd6a8893c9 285 Gene3D G3DSA:3.40.50.720 2 218 1.2E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain YE1738 079eb5935bb90abed9bca4dd6a8893c9 285 Pfam PF05368 NmrA-like family 2 220 2.1E-23 T 22-04-2016 IPR008030 NmrA-like domain YE1738 079eb5935bb90abed9bca4dd6a8893c9 285 PANTHER PTHR14194 2 282 2.4E-118 T 22-04-2016 YE1738 079eb5935bb90abed9bca4dd6a8893c9 285 SUPERFAMILY SSF51735 2 255 4.29E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain YE1469 0c45106048fc125695e5309c23d89566 381 SUPERFAMILY SSF53383 15 380 1.42E-115 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YE1469 0c45106048fc125695e5309c23d89566 381 PANTHER PTHR11808:SF15 3 379 1.1E-200 T 22-04-2016 YE1469 0c45106048fc125695e5309c23d89566 381 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 5 379 1.6E-156 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 YE1469 0c45106048fc125695e5309c23d89566 381 Gene3D G3DSA:3.40.640.10 3 245 6.7E-91 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YE1469 0c45106048fc125695e5309c23d89566 381 PANTHER PTHR11808 3 379 1.1E-200 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 YE1469 0c45106048fc125695e5309c23d89566 381 PIRSF PIRSF001434 1 381 3.8E-147 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 YE1469 0c45106048fc125695e5309c23d89566 381 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 188 202 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 YE1469 0c45106048fc125695e5309c23d89566 381 Gene3D G3DSA:3.90.1150.10 247 380 7.7E-56 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YE0245 e52a3fa7e3d5a977187867a8fda0c915 246 PANTHER PTHR23344:SF20 2 242 3.1E-78 T 22-04-2016 YE0245 e52a3fa7e3d5a977187867a8fda0c915 246 Gene3D G3DSA:3.20.20.190 3 242 1.7E-61 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 YE0245 e52a3fa7e3d5a977187867a8fda0c915 246 PANTHER PTHR23344 2 242 3.1E-78 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 YE0245 e52a3fa7e3d5a977187867a8fda0c915 246 SUPERFAMILY SSF51695 6 242 4.71E-63 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 YE0245 e52a3fa7e3d5a977187867a8fda0c915 246 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 13 240 3.1E-39 T 22-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 YE4102 a97c6cf840d35ff190cfd497768aede5 424 Pfam PF02378 Phosphotransferase system, EIIC 34 346 7.5E-47 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 YE4102 a97c6cf840d35ff190cfd497768aede5 424 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 17 421 1.9E-91 T 22-04-2016 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 YE4102 a97c6cf840d35ff190cfd497768aede5 424 PIRSF PIRSF006351 6 424 6.2E-112 T 22-04-2016 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 YE4102 a97c6cf840d35ff190cfd497768aede5 424 PANTHER PTHR33989 4 424 2.9E-121 T 22-04-2016 YE0683 2801041198b24e21ca2158addbdb3ca7 68 Gene3D G3DSA:3.30.50.10 2 63 8.7E-27 T 22-04-2016 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 YE0683 2801041198b24e21ca2158addbdb3ca7 68 SUPERFAMILY SSF57716 5 63 2.57E-21 T 22-04-2016 YE0683 2801041198b24e21ca2158addbdb3ca7 68 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 4 60 18.301 T 22-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 YE0683 2801041198b24e21ca2158addbdb3ca7 68 PANTHER PTHR36150 3 64 1.4E-26 T 22-04-2016 YE0683 2801041198b24e21ca2158addbdb3ca7 68 Pfam PF03884 Domain of unknown function (DUF329) 8 58 7.3E-24 T 22-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 YE0683 2801041198b24e21ca2158addbdb3ca7 68 PANTHER PTHR36150:SF1 3 64 1.4E-26 T 22-04-2016 YE0699 6292ef882d389b732996716c4b54ddfa 887 PANTHER PTHR11624 787 869 0.0 T 22-04-2016 IPR033247 Transketolase family YE0699 6292ef882d389b732996716c4b54ddfa 887 PANTHER PTHR11624 472 535 0.0 T 22-04-2016 IPR033247 Transketolase family YE0699 6292ef882d389b732996716c4b54ddfa 887 PANTHER PTHR11624 363 450 0.0 T 22-04-2016 IPR033247 Transketolase family YE0699 6292ef882d389b732996716c4b54ddfa 887 PANTHER PTHR11624 553 768 0.0 T 22-04-2016 IPR033247 Transketolase family YE0699 6292ef882d389b732996716c4b54ddfa 887 PANTHER PTHR11624 75 294 0.0 T 22-04-2016 IPR033247 Transketolase family YE0699 6292ef882d389b732996716c4b54ddfa 887 Gene3D G3DSA:3.40.50.970 473 705 3.8E-120 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE0699 6292ef882d389b732996716c4b54ddfa 887 Gene3D G3DSA:3.40.50.970 59 469 4.2E-156 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE0699 6292ef882d389b732996716c4b54ddfa 887 SUPERFAMILY SSF52518 59 469 1.2E-142 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE0699 6292ef882d389b732996716c4b54ddfa 887 SUPERFAMILY SSF52518 474 701 1.88E-98 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE0699 6292ef882d389b732996716c4b54ddfa 887 PANTHER PTHR11624:SF67 787 869 0.0 T 22-04-2016 YE0699 6292ef882d389b732996716c4b54ddfa 887 PANTHER PTHR11624:SF67 472 535 0.0 T 22-04-2016 YE0699 6292ef882d389b732996716c4b54ddfa 887 PANTHER PTHR11624:SF67 363 450 0.0 T 22-04-2016 YE0699 6292ef882d389b732996716c4b54ddfa 887 PANTHER PTHR11624:SF67 553 768 0.0 T 22-04-2016 YE0699 6292ef882d389b732996716c4b54ddfa 887 PANTHER PTHR11624:SF67 75 294 0.0 T 22-04-2016 YE0699 6292ef882d389b732996716c4b54ddfa 887 PIRSF PIRSF000156 1 887 0.0 T 22-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 YE0699 6292ef882d389b732996716c4b54ddfa 887 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 5 886 0.0 T 22-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 YE0699 6292ef882d389b732996716c4b54ddfa 887 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 111 294 4.1E-8 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 YE0699 6292ef882d389b732996716c4b54ddfa 887 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 362 427 1.0E-4 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 YE0699 6292ef882d389b732996716c4b54ddfa 887 SUPERFAMILY SSF52922 702 885 3.14E-62 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 YE0699 6292ef882d389b732996716c4b54ddfa 887 Gene3D G3DSA:3.40.50.920 707 885 1.1E-75 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 YE3589 d82a3437cdb95cb14ae1f7b0f8e31673 339 PANTHER PTHR30146:SF30 8 334 4.3E-103 T 22-04-2016 YE3589 d82a3437cdb95cb14ae1f7b0f8e31673 339 SUPERFAMILY SSF47413 7 67 5.25E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE3589 d82a3437cdb95cb14ae1f7b0f8e31673 339 SUPERFAMILY SSF53822 69 333 1.25E-71 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YE3589 d82a3437cdb95cb14ae1f7b0f8e31673 339 Gene3D G3DSA:3.40.50.2300 182 309 1.0E-47 T 22-04-2016 YE3589 d82a3437cdb95cb14ae1f7b0f8e31673 339 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 68 273 7.1E-35 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain YE3589 d82a3437cdb95cb14ae1f7b0f8e31673 339 Gene3D G3DSA:1.10.260.40 10 61 1.1E-21 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE3589 d82a3437cdb95cb14ae1f7b0f8e31673 339 PANTHER PTHR30146 8 334 4.3E-103 T 22-04-2016 YE3589 d82a3437cdb95cb14ae1f7b0f8e31673 339 Pfam PF00356 Bacterial regulatory proteins, lacI family 13 56 1.1E-12 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE3589 d82a3437cdb95cb14ae1f7b0f8e31673 339 Gene3D G3DSA:3.40.50.2300 62 181 5.7E-46 T 22-04-2016 YE3589 d82a3437cdb95cb14ae1f7b0f8e31673 339 SMART SM00354 8 79 6.0E-23 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE3975 223a54596d7bfdc0ef12acb32959857c 173 PANTHER PTHR21087 1 173 8.6E-74 T 22-04-2016 YE3975 223a54596d7bfdc0ef12acb32959857c 173 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 22-04-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 YE3975 223a54596d7bfdc0ef12acb32959857c 173 Pfam PF01202 Shikimate kinase 13 170 7.3E-57 T 22-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 YE3975 223a54596d7bfdc0ef12acb32959857c 173 Hamap MF_00109 Shikimate kinase [aroK]. 4 171 29.478 T 22-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 YE3975 223a54596d7bfdc0ef12acb32959857c 173 PRINTS PR01100 Shikimate kinase family signature 7 22 4.3E-29 T 22-04-2016 YE3975 223a54596d7bfdc0ef12acb32959857c 173 PRINTS PR01100 Shikimate kinase family signature 98 115 4.3E-29 T 22-04-2016 YE3975 223a54596d7bfdc0ef12acb32959857c 173 PRINTS PR01100 Shikimate kinase family signature 77 86 4.3E-29 T 22-04-2016 YE3975 223a54596d7bfdc0ef12acb32959857c 173 PRINTS PR01100 Shikimate kinase family signature 59 67 4.3E-29 T 22-04-2016 YE3975 223a54596d7bfdc0ef12acb32959857c 173 PRINTS PR01100 Shikimate kinase family signature 31 44 4.3E-29 T 22-04-2016 YE3975 223a54596d7bfdc0ef12acb32959857c 173 SUPERFAMILY SSF52540 4 170 7.83E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3975 223a54596d7bfdc0ef12acb32959857c 173 Gene3D G3DSA:3.40.50.300 2 172 5.2E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2215 bd42991b86fec9ea70e2ea2e27edc568 104 PANTHER PTHR34606 1 104 1.6E-61 T 22-04-2016 YE2215 bd42991b86fec9ea70e2ea2e27edc568 104 SMART SM00749 42 104 2.5E-7 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria YE2215 bd42991b86fec9ea70e2ea2e27edc568 104 PANTHER PTHR34606:SF1 1 104 1.6E-61 T 22-04-2016 YE2215 bd42991b86fec9ea70e2ea2e27edc568 104 Pfam PF04972 BON domain 37 103 1.6E-20 T 22-04-2016 IPR007055 BON domain YE3258 dc74e920c81c2f994a2ed9454f1affa4 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 2.9E-19 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 YE3258 dc74e920c81c2f994a2ed9454f1affa4 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 2.9E-19 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 YE3258 dc74e920c81c2f994a2ed9454f1affa4 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 2.9E-19 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 YE3258 dc74e920c81c2f994a2ed9454f1affa4 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 2.9E-19 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 YE3258 dc74e920c81c2f994a2ed9454f1affa4 572 Gene3D G3DSA:3.30.930.10 1 228 9.6E-109 T 22-04-2016 YE3258 dc74e920c81c2f994a2ed9454f1affa4 572 Gene3D G3DSA:3.30.930.10 407 468 9.6E-109 T 22-04-2016 YE3258 dc74e920c81c2f994a2ed9454f1affa4 572 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 42.978 T 22-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 YE3258 dc74e920c81c2f994a2ed9454f1affa4 572 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 459 4.1E-49 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YE3258 dc74e920c81c2f994a2ed9454f1affa4 572 Pfam PF04073 Aminoacyl-tRNA editing domain 257 377 3.0E-26 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 YE3258 dc74e920c81c2f994a2ed9454f1affa4 572 SUPERFAMILY SSF55826 218 390 9.29E-33 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 YE3258 dc74e920c81c2f994a2ed9454f1affa4 572 PANTHER PTHR11451:SF3 4 244 1.4E-161 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 YE3258 dc74e920c81c2f994a2ed9454f1affa4 572 PANTHER PTHR11451:SF3 399 572 1.4E-161 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 YE3258 dc74e920c81c2f994a2ed9454f1affa4 572 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 567 1.1E-271 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 YE3258 dc74e920c81c2f994a2ed9454f1affa4 572 Pfam PF03129 Anticodon binding domain 475 568 5.3E-21 T 22-04-2016 IPR004154 Anticodon-binding YE3258 dc74e920c81c2f994a2ed9454f1affa4 572 Gene3D G3DSA:3.90.960.10 256 388 2.8E-31 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 YE3258 dc74e920c81c2f994a2ed9454f1affa4 572 PIRSF PIRSF001535 1 572 3.9E-276 T 22-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 YE3258 dc74e920c81c2f994a2ed9454f1affa4 572 SUPERFAMILY SSF52954 463 571 6.64E-33 T 22-04-2016 IPR004154 Anticodon-binding YE3258 dc74e920c81c2f994a2ed9454f1affa4 572 PANTHER PTHR11451 4 244 1.4E-161 T 22-04-2016 YE3258 dc74e920c81c2f994a2ed9454f1affa4 572 PANTHER PTHR11451 399 572 1.4E-161 T 22-04-2016 YE3258 dc74e920c81c2f994a2ed9454f1affa4 572 Gene3D G3DSA:3.40.50.800 470 569 3.3E-31 T 22-04-2016 IPR004154 Anticodon-binding YE3258 dc74e920c81c2f994a2ed9454f1affa4 572 SUPERFAMILY SSF55681 407 478 1.58E-107 T 22-04-2016 YE3258 dc74e920c81c2f994a2ed9454f1affa4 572 SUPERFAMILY SSF55681 10 237 1.58E-107 T 22-04-2016 YE3884 878f7100c0a4b7e730d489a9b4190525 273 PANTHER PTHR21089:SF2 3 273 2.8E-146 T 22-04-2016 YE3884 878f7100c0a4b7e730d489a9b4190525 273 SUPERFAMILY SSF51735 103 268 1.16E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3884 878f7100c0a4b7e730d489a9b4190525 273 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 5 271 2.7E-93 T 22-04-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 YE3884 878f7100c0a4b7e730d489a9b4190525 273 Gene3D G3DSA:3.40.192.10 3 108 4.5E-36 T 22-04-2016 YE3884 878f7100c0a4b7e730d489a9b4190525 273 SUPERFAMILY SSF53223 4 102 1.09E-30 T 22-04-2016 YE3884 878f7100c0a4b7e730d489a9b4190525 273 Gene3D G3DSA:3.40.50.720 109 245 1.5E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3884 878f7100c0a4b7e730d489a9b4190525 273 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 120 191 1.5E-10 T 22-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase YE3884 878f7100c0a4b7e730d489a9b4190525 273 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 7 89 4.8E-24 T 22-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 YE3884 878f7100c0a4b7e730d489a9b4190525 273 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 2 270 32.229 T 22-04-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 YE3884 878f7100c0a4b7e730d489a9b4190525 273 PANTHER PTHR21089 3 273 2.8E-146 T 22-04-2016 YE4130 fe8896c9290bb3aa5c76dff65daa0a3f 630 Gene3D G3DSA:2.40.30.10 183 300 4.6E-26 T 22-04-2016 YE4130 fe8896c9290bb3aa5c76dff65daa0a3f 630 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 26 41 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site YE4130 fe8896c9290bb3aa5c76dff65daa0a3f 630 SUPERFAMILY SSF50447 180 299 1.62E-24 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain YE4130 fe8896c9290bb3aa5c76dff65daa0a3f 630 SUPERFAMILY SSF46785 565 622 7.49E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE4130 fe8896c9290bb3aa5c76dff65daa0a3f 630 Gene3D G3DSA:3.40.50.300 2 182 4.0E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE4130 fe8896c9290bb3aa5c76dff65daa0a3f 630 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 1 622 1.5E-210 T 22-04-2016 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 YE4130 fe8896c9290bb3aa5c76dff65daa0a3f 630 Gene3D G3DSA:1.10.10.10 430 496 9.6E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE4130 fe8896c9290bb3aa5c76dff65daa0a3f 630 PANTHER PTHR23115 1 364 2.6E-131 T 22-04-2016 YE4130 fe8896c9290bb3aa5c76dff65daa0a3f 630 SUPERFAMILY SSF46785 503 560 2.72E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE4130 fe8896c9290bb3aa5c76dff65daa0a3f 630 PRINTS PR00315 GTP-binding elongation factor signature 70 81 2.9E-6 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YE4130 fe8896c9290bb3aa5c76dff65daa0a3f 630 PRINTS PR00315 GTP-binding elongation factor signature 2 15 2.9E-6 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YE4130 fe8896c9290bb3aa5c76dff65daa0a3f 630 PRINTS PR00315 GTP-binding elongation factor signature 54 64 2.9E-6 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YE4130 fe8896c9290bb3aa5c76dff65daa0a3f 630 PRINTS PR00315 GTP-binding elongation factor signature 107 116 2.9E-6 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YE4130 fe8896c9290bb3aa5c76dff65daa0a3f 630 Pfam PF09106 Elongation factor SelB, winged helix 440 495 4.0E-17 T 22-04-2016 IPR015190 Translation elongation factor SelB, winged helix, type 2 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 YE4130 fe8896c9290bb3aa5c76dff65daa0a3f 630 SUPERFAMILY SSF46785 431 498 1.01E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE4130 fe8896c9290bb3aa5c76dff65daa0a3f 630 SUPERFAMILY SSF50465 280 364 7.91E-6 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal YE4130 fe8896c9290bb3aa5c76dff65daa0a3f 630 Gene3D G3DSA:1.10.10.10 564 622 1.8E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE4130 fe8896c9290bb3aa5c76dff65daa0a3f 630 SUPERFAMILY SSF52540 2 166 6.0E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE4130 fe8896c9290bb3aa5c76dff65daa0a3f 630 Pfam PF00009 Elongation factor Tu GTP binding domain 2 166 5.8E-30 T 22-04-2016 YE4130 fe8896c9290bb3aa5c76dff65daa0a3f 630 PANTHER PTHR23115:SF129 1 364 2.6E-131 T 22-04-2016 YE4130 fe8896c9290bb3aa5c76dff65daa0a3f 630 Pfam PF09107 Elongation factor SelB, winged helix 576 620 5.1E-20 T 22-04-2016 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 YE3767 804bdb4563dd631ce74e6eec1263da61 154 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 103 149 6.1E-20 T 22-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal YE3767 804bdb4563dd631ce74e6eec1263da61 154 SUPERFAMILY SSF54893 2 100 1.02E-34 T 22-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal YE3767 804bdb4563dd631ce74e6eec1263da61 154 SUPERFAMILY SSF57825 101 151 3.01E-16 T 22-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal YE3767 804bdb4563dd631ce74e6eec1263da61 154 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 97 8.7E-30 T 22-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal YE3767 804bdb4563dd631ce74e6eec1263da61 154 Gene3D G3DSA:2.30.30.20 101 151 1.9E-24 T 22-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal YE3767 804bdb4563dd631ce74e6eec1263da61 154 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 6 151 1.3E-65 T 22-04-2016 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 YE3767 804bdb4563dd631ce74e6eec1263da61 154 PANTHER PTHR35805:SF1 2 154 5.6E-78 T 22-04-2016 YE3767 804bdb4563dd631ce74e6eec1263da61 154 Gene3D G3DSA:3.30.70.140 2 98 7.2E-37 T 22-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal YE3767 804bdb4563dd631ce74e6eec1263da61 154 PANTHER PTHR35805 2 154 5.6E-78 T 22-04-2016 YE3767 804bdb4563dd631ce74e6eec1263da61 154 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 3.0E-47 T 22-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal YE3767 804bdb4563dd631ce74e6eec1263da61 154 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 32.964 T 22-04-2016 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 YE2936 dd7488e91591313178030d2674ad3f7b 133 Gene3D G3DSA:3.10.129.10 3 131 1.5E-47 T 22-04-2016 IPR029069 HotDog domain YE2936 dd7488e91591313178030d2674ad3f7b 133 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 9 125 2.3E-42 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 YE2936 dd7488e91591313178030d2674ad3f7b 133 SUPERFAMILY SSF54637 4 132 2.05E-38 T 22-04-2016 IPR029069 HotDog domain YE2936 dd7488e91591313178030d2674ad3f7b 133 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 6 130 1.4E-50 T 22-04-2016 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 KEGG: 00360+3.1.2.-|KEGG: 00362+3.1.2.-|KEGG: 00592+3.1.2.-|KEGG: 00903+3.1.2.- YE2936 dd7488e91591313178030d2674ad3f7b 133 PANTHER PTHR31793 1 133 4.5E-53 T 22-04-2016 YE2936 dd7488e91591313178030d2674ad3f7b 133 PANTHER PTHR31793:SF9 1 133 4.5E-53 T 22-04-2016 YE2936 dd7488e91591313178030d2674ad3f7b 133 ProSitePatterns PS01328 4-hydroxybenzoyl-CoA thioesterase family active site. 11 28 - T 22-04-2016 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GO:0016787 YE2936 dd7488e91591313178030d2674ad3f7b 133 PIRSF PIRSF003230 1 133 6.2E-47 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 YE2936 dd7488e91591313178030d2674ad3f7b 133 Pfam PF03061 Thioesterase superfamily 20 103 7.1E-16 T 22-04-2016 IPR006683 Thioesterase domain YE2169 f3b218a3d29fd3f651af46d91a9e75b7 443 PANTHER PTHR30508 51 441 2.0E-135 T 22-04-2016 YE2169 f3b218a3d29fd3f651af46d91a9e75b7 443 Pfam PF01458 Uncharacterized protein family (UPF0051) 190 413 2.7E-71 T 22-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 YE2169 f3b218a3d29fd3f651af46d91a9e75b7 443 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 152 428 2.5E-88 T 22-04-2016 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 YE2169 f3b218a3d29fd3f651af46d91a9e75b7 443 PANTHER PTHR30508:SF0 51 441 2.0E-135 T 22-04-2016 YE2169 f3b218a3d29fd3f651af46d91a9e75b7 443 SUPERFAMILY SSF101960 48 439 4.84E-108 T 22-04-2016 YE2787 36ab61fee399e11996790052797ba6e7 363 Pfam PF13407 Periplasmic binding protein domain 60 307 1.5E-26 T 22-04-2016 IPR025997 Periplasmic binding protein YE2787 36ab61fee399e11996790052797ba6e7 363 SUPERFAMILY SSF53822 45 310 4.35E-40 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YE2787 36ab61fee399e11996790052797ba6e7 363 Gene3D G3DSA:3.40.50.2300 41 167 5.1E-20 T 22-04-2016 YE2787 36ab61fee399e11996790052797ba6e7 363 Gene3D G3DSA:3.40.50.2300 168 299 8.2E-18 T 22-04-2016 YE2216 271ee21abe8e662ac7a96e961fbf7f20 211 PANTHER PTHR36920:SF1 1 211 1.7E-92 T 22-04-2016 YE2216 271ee21abe8e662ac7a96e961fbf7f20 211 Pfam PF03922 OmpW family 23 211 2.9E-65 T 22-04-2016 IPR005618 Outer membrane protein, OmpW GO:0019867 YE2216 271ee21abe8e662ac7a96e961fbf7f20 211 Gene3D G3DSA:2.40.160.20 22 211 8.6E-71 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YE2216 271ee21abe8e662ac7a96e961fbf7f20 211 SUPERFAMILY SSF56925 23 211 9.94E-28 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YE2216 271ee21abe8e662ac7a96e961fbf7f20 211 PANTHER PTHR36920 1 211 1.7E-92 T 22-04-2016 YE2216 271ee21abe8e662ac7a96e961fbf7f20 211 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 203 211 - T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YE1628 613d69221abc499a12b9693ff3509979 319 SUPERFAMILY SSF55120 95 314 5.12E-64 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 YE1628 613d69221abc499a12b9693ff3509979 319 Pfam PF01479 S4 domain 20 66 4.3E-9 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YE1628 613d69221abc499a12b9693ff3509979 319 PANTHER PTHR11079:SF84 1 317 2.3E-167 T 22-04-2016 YE1628 613d69221abc499a12b9693ff3509979 319 Pfam PF00849 RNA pseudouridylate synthase 102 249 4.7E-31 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 YE1628 613d69221abc499a12b9693ff3509979 319 Gene3D G3DSA:3.10.290.10 20 68 2.5E-6 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YE1628 613d69221abc499a12b9693ff3509979 319 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 140 154 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 YE1628 613d69221abc499a12b9693ff3509979 319 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 314 5.8E-93 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 YE1628 613d69221abc499a12b9693ff3509979 319 SUPERFAMILY SSF55174 19 70 2.94E-8 T 22-04-2016 YE1628 613d69221abc499a12b9693ff3509979 319 SMART SM00363 20 79 2.5E-8 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YE1628 613d69221abc499a12b9693ff3509979 319 PANTHER PTHR11079 1 317 2.3E-167 T 22-04-2016 YE1305 63c6dd36b2d7bc01d6ceb28084d1a231 294 SUPERFAMILY SSF103481 187 283 6.93E-14 T 22-04-2016 YE1305 63c6dd36b2d7bc01d6ceb28084d1a231 294 PANTHER PTHR12715 3 294 1.5E-98 T 22-04-2016 YE1305 63c6dd36b2d7bc01d6ceb28084d1a231 294 SUPERFAMILY SSF103481 42 138 1.27E-10 T 22-04-2016 YE1305 63c6dd36b2d7bc01d6ceb28084d1a231 294 Pfam PF00892 EamA-like transporter family 150 280 1.7E-20 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YE1305 63c6dd36b2d7bc01d6ceb28084d1a231 294 Pfam PF00892 EamA-like transporter family 4 135 2.2E-18 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YE1305 63c6dd36b2d7bc01d6ceb28084d1a231 294 PANTHER PTHR12715:SF12 3 294 1.5E-98 T 22-04-2016 YE2589 515df38b0df969cb70ecdbf8d023ba01 63 Hamap MF_01549 Protein DsrB [dsrB]. 1 62 27.223 T 22-04-2016 IPR019717 Dextransucrase DSRB YE2589 515df38b0df969cb70ecdbf8d023ba01 63 Pfam PF10781 Dextransucrase DSRB 1 60 1.9E-37 T 22-04-2016 IPR019717 Dextransucrase DSRB YE0282 cbf0d0004008679f39e851c6366c3c6e 234 PANTHER PTHR23105:SF5 21 229 9.9E-83 T 22-04-2016 YE0282 cbf0d0004008679f39e851c6366c3c6e 234 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.443 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 YE0282 cbf0d0004008679f39e851c6366c3c6e 234 PANTHER PTHR23105 21 229 9.9E-83 T 22-04-2016 YE0282 cbf0d0004008679f39e851c6366c3c6e 234 PIRSF PIRSF002155 1 227 5.0E-78 T 22-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 YE0282 cbf0d0004008679f39e851c6366c3c6e 234 Gene3D G3DSA:3.40.50.790 69 159 1.9E-41 T 22-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich YE0282 cbf0d0004008679f39e851c6366c3c6e 234 SUPERFAMILY SSF56808 6 225 1.18E-82 T 22-04-2016 IPR023674 Ribosomal protein L1-like YE0282 cbf0d0004008679f39e851c6366c3c6e 234 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 9.7E-52 T 22-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein YE0282 cbf0d0004008679f39e851c6366c3c6e 234 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 227 2.9E-107 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 YE0282 cbf0d0004008679f39e851c6366c3c6e 234 Gene3D G3DSA:3.30.190.20 18 68 1.5E-46 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 YE0282 cbf0d0004008679f39e851c6366c3c6e 234 Gene3D G3DSA:3.30.190.20 161 225 1.5E-46 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 YE0282 cbf0d0004008679f39e851c6366c3c6e 234 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 22-04-2016 IPR023673 Ribosomal protein L1, conserved site YE3317 ffe13cc51f9a8be1ec8e3cc5447f5966 264 Pfam PF00303 Thymidylate synthase 2 264 1.5E-124 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 YE3317 ffe13cc51f9a8be1ec8e3cc5447f5966 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 2.3E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 YE3317 ffe13cc51f9a8be1ec8e3cc5447f5966 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 2.3E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 YE3317 ffe13cc51f9a8be1ec8e3cc5447f5966 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 2.3E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 YE3317 ffe13cc51f9a8be1ec8e3cc5447f5966 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 2.3E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 YE3317 ffe13cc51f9a8be1ec8e3cc5447f5966 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 2.3E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 YE3317 ffe13cc51f9a8be1ec8e3cc5447f5966 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 22-04-2016 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 YE3317 ffe13cc51f9a8be1ec8e3cc5447f5966 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 45.971 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 YE3317 ffe13cc51f9a8be1ec8e3cc5447f5966 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 264 6.7E-93 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 YE3317 ffe13cc51f9a8be1ec8e3cc5447f5966 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 85 2.5E-42 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 YE3317 ffe13cc51f9a8be1ec8e3cc5447f5966 264 SUPERFAMILY SSF55831 1 264 3.27E-130 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 YE3317 ffe13cc51f9a8be1ec8e3cc5447f5966 264 PANTHER PTHR11548 1 264 7.9E-198 T 22-04-2016 YE3317 ffe13cc51f9a8be1ec8e3cc5447f5966 264 Gene3D G3DSA:3.30.572.10 1 264 2.0E-134 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 YE3031 d2aef564eae1f620a2d9d586520da628 283 PANTHER PTHR11732:SF236 1 283 8.3E-150 T 22-04-2016 YE3031 d2aef564eae1f620a2d9d586520da628 283 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 120 137 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 YE3031 d2aef564eae1f620a2d9d586520da628 283 SUPERFAMILY SSF51430 2 262 9.3E-88 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YE3031 d2aef564eae1f620a2d9d586520da628 283 Pfam PF00248 Aldo/keto reductase family 15 257 2.6E-47 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YE3031 d2aef564eae1f620a2d9d586520da628 283 Gene3D G3DSA:3.20.20.100 2 263 4.9E-99 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YE3031 d2aef564eae1f620a2d9d586520da628 283 PANTHER PTHR11732 1 283 8.3E-150 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta YE3031 d2aef564eae1f620a2d9d586520da628 283 PRINTS PR00069 Aldo-keto reductase signature 35 59 9.6E-44 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YE3031 d2aef564eae1f620a2d9d586520da628 283 PRINTS PR00069 Aldo-keto reductase signature 91 109 9.6E-44 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YE3031 d2aef564eae1f620a2d9d586520da628 283 PRINTS PR00069 Aldo-keto reductase signature 120 137 9.6E-44 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YE3031 d2aef564eae1f620a2d9d586520da628 283 PRINTS PR00069 Aldo-keto reductase signature 154 183 9.6E-44 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YE3031 d2aef564eae1f620a2d9d586520da628 283 PRINTS PR00069 Aldo-keto reductase signature 193 217 9.6E-44 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YE3031 d2aef564eae1f620a2d9d586520da628 283 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 39 56 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 YE3685 87bc565c5daa9d72d16bfbf38f63f23a 443 PANTHER PTHR30480 5 304 8.0E-64 T 22-04-2016 YE3685 87bc565c5daa9d72d16bfbf38f63f23a 443 PANTHER PTHR30480:SF3 5 304 8.0E-64 T 22-04-2016 YE3685 87bc565c5daa9d72d16bfbf38f63f23a 443 Pfam PF07075 Protein of unknown function (DUF1343) 47 442 7.8E-102 T 22-04-2016 IPR008302 Uncharacterised conserved protein UCP016719 YE0218 60f0437a30b46b6bdf101e16a48e2658 776 Gene3D G3DSA:2.70.150.10 224 372 2.4E-24 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 YE0218 60f0437a30b46b6bdf101e16a48e2658 776 PANTHER PTHR24093:SF126 67 745 1.3E-242 T 22-04-2016 YE0218 60f0437a30b46b6bdf101e16a48e2658 776 SUPERFAMILY SSF81653 274 371 4.58E-20 T 22-04-2016 YE0218 60f0437a30b46b6bdf101e16a48e2658 776 PRINTS PR00941 Cadmium-transporting ATPase signature 337 353 2.8E-8 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 YE0218 60f0437a30b46b6bdf101e16a48e2658 776 PRINTS PR00941 Cadmium-transporting ATPase signature 86 95 2.8E-8 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 YE0218 60f0437a30b46b6bdf101e16a48e2658 776 PRINTS PR00941 Cadmium-transporting ATPase signature 276 292 2.8E-8 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 YE0218 60f0437a30b46b6bdf101e16a48e2658 776 PRINTS PR00941 Cadmium-transporting ATPase signature 97 118 2.8E-8 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 YE0218 60f0437a30b46b6bdf101e16a48e2658 776 PRINTS PR00941 Cadmium-transporting ATPase signature 256 276 2.8E-8 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 YE0218 60f0437a30b46b6bdf101e16a48e2658 776 ProSitePatterns PS01229 Hypothetical cof family signature 2. 668 690 - T 22-04-2016 YE0218 60f0437a30b46b6bdf101e16a48e2658 776 SUPERFAMILY SSF55008 85 146 7.85E-13 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 YE0218 60f0437a30b46b6bdf101e16a48e2658 776 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 474 480 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site YE0218 60f0437a30b46b6bdf101e16a48e2658 776 Pfam PF00403 Heavy-metal-associated domain 87 143 3.8E-10 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 YE0218 60f0437a30b46b6bdf101e16a48e2658 776 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 617 627 1.6E-28 T 22-04-2016 YE0218 60f0437a30b46b6bdf101e16a48e2658 776 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 595 606 1.6E-28 T 22-04-2016 YE0218 60f0437a30b46b6bdf101e16a48e2658 776 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 668 687 1.6E-28 T 22-04-2016 YE0218 60f0437a30b46b6bdf101e16a48e2658 776 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 321 335 1.6E-28 T 22-04-2016 YE0218 60f0437a30b46b6bdf101e16a48e2658 776 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 472 486 1.6E-28 T 22-04-2016 YE0218 60f0437a30b46b6bdf101e16a48e2658 776 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 691 703 1.6E-28 T 22-04-2016 YE0218 60f0437a30b46b6bdf101e16a48e2658 776 Gene3D G3DSA:3.30.70.100 83 145 1.1E-15 T 22-04-2016 YE0218 60f0437a30b46b6bdf101e16a48e2658 776 Gene3D G3DSA:3.40.50.1000 448 485 1.2E-44 T 22-04-2016 IPR023214 HAD-like domain YE0218 60f0437a30b46b6bdf101e16a48e2658 776 Gene3D G3DSA:3.40.50.1000 598 734 1.2E-44 T 22-04-2016 IPR023214 HAD-like domain YE0218 60f0437a30b46b6bdf101e16a48e2658 776 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 244 746 9.4E-81 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 YE0218 60f0437a30b46b6bdf101e16a48e2658 776 Pfam PF00122 E1-E2 ATPase 242 463 2.5E-57 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 YE0218 60f0437a30b46b6bdf101e16a48e2658 776 PANTHER PTHR24093 67 745 1.3E-242 T 22-04-2016 YE0218 60f0437a30b46b6bdf101e16a48e2658 776 Gene3D G3DSA:3.40.1110.10 486 597 1.3E-23 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 YE0218 60f0437a30b46b6bdf101e16a48e2658 776 SUPERFAMILY SSF56784 567 768 1.71E-52 T 22-04-2016 IPR023214 HAD-like domain YE0218 60f0437a30b46b6bdf101e16a48e2658 776 SUPERFAMILY SSF56784 470 490 1.71E-52 T 22-04-2016 IPR023214 HAD-like domain YE0218 60f0437a30b46b6bdf101e16a48e2658 776 Pfam PF00702 haloacid dehalogenase-like hydrolase 468 681 1.3E-37 T 22-04-2016 YE0218 60f0437a30b46b6bdf101e16a48e2658 776 ProSitePatterns PS01047 Heavy-metal-associated domain. 88 117 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 YE0218 60f0437a30b46b6bdf101e16a48e2658 776 SUPERFAMILY SSF81665 223 275 9.94E-17 T 22-04-2016 YE0218 60f0437a30b46b6bdf101e16a48e2658 776 SUPERFAMILY SSF81665 717 756 9.94E-17 T 22-04-2016 YE0218 60f0437a30b46b6bdf101e16a48e2658 776 SUPERFAMILY SSF81665 372 466 9.94E-17 T 22-04-2016 YE0218 60f0437a30b46b6bdf101e16a48e2658 776 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 221 770 5.1E-174 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 YE1336 23be121c8400fdfdc6b14383e535c90d 164 SUPERFAMILY SSF116960 1 164 5.23E-70 T 22-04-2016 YE1336 23be121c8400fdfdc6b14383e535c90d 164 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 1 164 4.0E-94 T 22-04-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU YE1336 23be121c8400fdfdc6b14383e535c90d 164 Gene3D G3DSA:1.10.287.680 1 52 5.8E-31 T 22-04-2016 IPR023145 YfbU, helix-hairpin domain YE1336 23be121c8400fdfdc6b14383e535c90d 164 Gene3D G3DSA:1.10.3190.10 53 164 6.3E-51 T 22-04-2016 IPR023146 YfbU, alpha-helical bundle domain YE1336 23be121c8400fdfdc6b14383e535c90d 164 Pfam PF03887 YfbU domain 1 164 6.8E-70 T 22-04-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU YE1336 23be121c8400fdfdc6b14383e535c90d 164 PIRSF PIRSF006272 1 164 1.3E-75 T 22-04-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU YE1336 23be121c8400fdfdc6b14383e535c90d 164 Hamap MF_00762 UPF0304 protein YfbU [yfbU]. 1 164 38.232 T 22-04-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU YE0372 7555e86fa2213d521ef1b75d0074724a 504 PIRSF PIRSF017184 15 504 1.3E-143 T 22-04-2016 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 YE0372 7555e86fa2213d521ef1b75d0074724a 504 SUPERFAMILY SSF64153 16 256 2.49E-59 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 YE0372 7555e86fa2213d521ef1b75d0074724a 504 Gene3D G3DSA:3.40.1190.20 242 498 1.3E-88 T 22-04-2016 IPR029056 Ribokinase-like YE0372 7555e86fa2213d521ef1b75d0074724a 504 PANTHER PTHR12592 6 504 1.7E-152 T 22-04-2016 YE0372 7555e86fa2213d521ef1b75d0074724a 504 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 234 503 23.452 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 YE0372 7555e86fa2213d521ef1b75d0074724a 504 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 20 220 4.8E-49 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 YE0372 7555e86fa2213d521ef1b75d0074724a 504 Pfam PF03853 YjeF-related protein N-terminus 40 199 4.7E-41 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 YE0372 7555e86fa2213d521ef1b75d0074724a 504 SUPERFAMILY SSF53613 232 499 2.89E-73 T 22-04-2016 IPR029056 Ribokinase-like YE0372 7555e86fa2213d521ef1b75d0074724a 504 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 19 220 21.674 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 YE0372 7555e86fa2213d521ef1b75d0074724a 504 PANTHER PTHR12592:SF0 6 504 1.7E-152 T 22-04-2016 YE0372 7555e86fa2213d521ef1b75d0074724a 504 Gene3D G3DSA:3.40.50.10260 15 241 4.5E-63 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 YE0372 7555e86fa2213d521ef1b75d0074724a 504 Pfam PF01256 Carbohydrate kinase 258 496 6.6E-69 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 YE0372 7555e86fa2213d521ef1b75d0074724a 504 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 232 499 6.3E-80 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 YE3166 a812bfd87884d85173233b99faf9a6ea 378 SUPERFAMILY SSF51713 2 364 1.44E-163 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 YE3166 a812bfd87884d85173233b99faf9a6ea 378 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 367 2.8E-190 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 YE3166 a812bfd87884d85173233b99faf9a6ea 378 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 359 58.533 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 YE3166 a812bfd87884d85173233b99faf9a6ea 378 Pfam PF01702 Queuine tRNA-ribosyltransferase 126 360 4.7E-93 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 YE3166 a812bfd87884d85173233b99faf9a6ea 378 Gene3D G3DSA:3.20.20.105 1 366 7.4E-170 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 YE3166 a812bfd87884d85173233b99faf9a6ea 378 PANTHER PTHR21148:SF26 1 364 4.8E-186 T 22-04-2016 YE3166 a812bfd87884d85173233b99faf9a6ea 378 PANTHER PTHR21148 1 364 4.8E-186 T 22-04-2016 YE3166 a812bfd87884d85173233b99faf9a6ea 378 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 367 1.1E-179 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 YE2755 12abc07297a82118ad1a85a599d58bef 105 Pfam PF04363 Protein of unknown function (DUF496) 9 100 6.3E-46 T 22-04-2016 IPR007458 Protein of unknown function DUF496 YE2755 12abc07297a82118ad1a85a599d58bef 105 PANTHER PTHR39591 2 105 3.0E-59 T 22-04-2016 YE2755 12abc07297a82118ad1a85a599d58bef 105 Hamap MF_00683 UPF0265 protein YeeX [yeeX]. 9 103 25.495 T 22-04-2016 IPR007458 Protein of unknown function DUF496 YE2755 12abc07297a82118ad1a85a599d58bef 105 PIRSF PIRSF028773 1 105 2.2E-49 T 22-04-2016 IPR007458 Protein of unknown function DUF496 YE2755 12abc07297a82118ad1a85a599d58bef 105 ProDom PD030876 UPF0265 YEEX HELIX ALPHA BFL460 UNCHARACTERIZED FN0411 HI1168 VPA1226 BCR 12 99 1.0E-41 T 22-04-2016 IPR007458 Protein of unknown function DUF496 YE3296 e84fc77f45350ca783ef3ab0741f0717 454 Pfam PF11892 Domain of unknown function (DUF3412) 333 452 2.0E-56 T 22-04-2016 IPR021826 Protein of unknown function DUF3412 YE3296 e84fc77f45350ca783ef3ab0741f0717 454 PANTHER PTHR31223 83 342 1.1E-197 T 22-04-2016 YE3296 e84fc77f45350ca783ef3ab0741f0717 454 Gene3D G3DSA:3.30.1850.10 2 112 1.3E-53 T 22-04-2016 IPR027820 Domain of unknown function DUF4478 YE3296 e84fc77f45350ca783ef3ab0741f0717 454 Pfam PF14793 Domain of unknown function (DUF4478) 4 110 3.1E-46 T 22-04-2016 IPR027820 Domain of unknown function DUF4478 YE3296 e84fc77f45350ca783ef3ab0741f0717 454 PANTHER PTHR31223:SF12 83 342 1.1E-197 T 22-04-2016 YE3296 e84fc77f45350ca783ef3ab0741f0717 454 PANTHER PTHR31223:SF12 359 384 1.1E-197 T 22-04-2016 YE3296 e84fc77f45350ca783ef3ab0741f0717 454 PANTHER PTHR31223 359 384 1.1E-197 T 22-04-2016 YE3296 e84fc77f45350ca783ef3ab0741f0717 454 Gene3D G3DSA:3.40.50.450 125 452 4.3E-123 T 22-04-2016 YE3296 e84fc77f45350ca783ef3ab0741f0717 454 SUPERFAMILY SSF102405 120 330 5.34E-42 T 22-04-2016 YE3296 e84fc77f45350ca783ef3ab0741f0717 454 Pfam PF03641 Possible lysine decarboxylase 190 329 3.8E-33 T 22-04-2016 IPR031100 LOG family YE0707 480a3f0ed36b816a49c76ec8f3e11380 295 SUPERFAMILY SSF103481 45 139 1.07E-7 T 22-04-2016 YE0707 480a3f0ed36b816a49c76ec8f3e11380 295 Pfam PF00892 EamA-like transporter family 157 284 1.3E-13 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YE0707 480a3f0ed36b816a49c76ec8f3e11380 295 PANTHER PTHR12715:SF7 1 292 2.3E-149 T 22-04-2016 YE0707 480a3f0ed36b816a49c76ec8f3e11380 295 PANTHER PTHR12715 1 292 2.3E-149 T 22-04-2016 YE0707 480a3f0ed36b816a49c76ec8f3e11380 295 SUPERFAMILY SSF103481 189 289 2.62E-12 T 22-04-2016 YE3726 dd0f11f3745a5ed987c46ddfad91d0df 299 SUPERFAMILY SSF53790 13 232 3.79E-83 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 YE3726 dd0f11f3745a5ed987c46ddfad91d0df 299 PANTHER PTHR21091 12 233 8.7E-93 T 22-04-2016 YE3726 dd0f11f3745a5ed987c46ddfad91d0df 299 Gene3D G3DSA:3.40.1010.10 13 121 2.1E-17 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 YE3726 dd0f11f3745a5ed987c46ddfad91d0df 299 PIRSF PIRSF005917 2 287 4.4E-106 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YE3726 dd0f11f3745a5ed987c46ddfad91d0df 299 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 22-04-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YE3726 dd0f11f3745a5ed987c46ddfad91d0df 299 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 284 5.0E-110 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YE3726 dd0f11f3745a5ed987c46ddfad91d0df 299 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 13 213 6.2E-26 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 YE3726 dd0f11f3745a5ed987c46ddfad91d0df 299 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 38.247 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YE3726 dd0f11f3745a5ed987c46ddfad91d0df 299 PANTHER PTHR21091:SF18 12 233 8.7E-93 T 22-04-2016 YE3726 dd0f11f3745a5ed987c46ddfad91d0df 299 Gene3D G3DSA:3.30.950.10 122 235 1.4E-41 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 YE3438 d3ca0e8744756c7bc5c3d41a4e86312d 376 SUPERFAMILY SSF102114 5 376 1.96E-107 T 22-04-2016 YE3438 d3ca0e8744756c7bc5c3d41a4e86312d 376 SMART SM00729 6 223 2.9E-49 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 YE3438 d3ca0e8744756c7bc5c3d41a4e86312d 376 Gene3D G3DSA:3.80.30.20 7 239 2.5E-27 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe YE3438 d3ca0e8744756c7bc5c3d41a4e86312d 376 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 368 2.2E-140 T 22-04-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- YE3438 d3ca0e8744756c7bc5c3d41a4e86312d 376 PANTHER PTHR13932 5 376 6.8E-228 T 22-04-2016 YE3438 d3ca0e8744756c7bc5c3d41a4e86312d 376 PANTHER PTHR13932:SF7 5 376 6.8E-228 T 22-04-2016 YE3438 d3ca0e8744756c7bc5c3d41a4e86312d 376 Pfam PF04055 Radical SAM superfamily 11 179 1.4E-16 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 YE3438 d3ca0e8744756c7bc5c3d41a4e86312d 376 Pfam PF06969 HemN C-terminal domain 304 364 2.2E-8 T 22-04-2016 IPR010723 HemN, C-terminal YE2646 b1a42931e480b26d1903e912fafca20e 430 PIRSF PIRSF006066 1 428 1.1E-175 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 YE2646 b1a42931e480b26d1903e912fafca20e 430 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 8 417 6.1E-113 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit YE2646 b1a42931e480b26d1903e912fafca20e 430 PANTHER PTHR33362 1 430 2.8E-244 T 22-04-2016 YE2646 b1a42931e480b26d1903e912fafca20e 430 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 422 2.4E-130 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 YE2646 b1a42931e480b26d1903e912fafca20e 430 PANTHER PTHR33362:SF2 1 430 2.8E-244 T 22-04-2016 YE0839 8ad39ffcd4bfc9c15157b348a93d0e0b 171 PIRSF PIRSF006160 1 162 2.3E-66 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 YE0839 8ad39ffcd4bfc9c15157b348a93d0e0b 171 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 152 4.2E-62 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 YE0839 8ad39ffcd4bfc9c15157b348a93d0e0b 171 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 155 7.0E-81 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 YE0839 8ad39ffcd4bfc9c15157b348a93d0e0b 171 Gene3D G3DSA:3.30.1360.80 1 170 6.7E-76 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 YE0839 8ad39ffcd4bfc9c15157b348a93d0e0b 171 PANTHER PTHR35799 2 169 7.8E-109 T 22-04-2016 YE0839 8ad39ffcd4bfc9c15157b348a93d0e0b 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 3.1E-50 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 YE0839 8ad39ffcd4bfc9c15157b348a93d0e0b 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 3.1E-50 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 YE0839 8ad39ffcd4bfc9c15157b348a93d0e0b 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 3.1E-50 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 YE0839 8ad39ffcd4bfc9c15157b348a93d0e0b 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 3.1E-50 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 YE0839 8ad39ffcd4bfc9c15157b348a93d0e0b 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 3.1E-50 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 YE0839 8ad39ffcd4bfc9c15157b348a93d0e0b 171 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 35.733 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 YE0839 8ad39ffcd4bfc9c15157b348a93d0e0b 171 SUPERFAMILY SSF63411 4 162 1.56E-67 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 YE3709 ce2b919fadd2b16791d4eb8de7d96743 434 SUPERFAMILY SSF103473 4 413 1.31E-78 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE3709 ce2b919fadd2b16791d4eb8de7d96743 434 Pfam PF07690 Major Facilitator Superfamily 18 288 1.0E-46 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YE3709 ce2b919fadd2b16791d4eb8de7d96743 434 PANTHER PTHR11662 1 421 3.2E-257 T 22-04-2016 YE3709 ce2b919fadd2b16791d4eb8de7d96743 434 Gene3D G3DSA:1.20.1250.20 8 201 2.2E-46 T 22-04-2016 YE3709 ce2b919fadd2b16791d4eb8de7d96743 434 Gene3D G3DSA:1.20.1250.20 224 424 1.2E-18 T 22-04-2016 YE3709 ce2b919fadd2b16791d4eb8de7d96743 434 PANTHER PTHR11662:SF285 1 421 3.2E-257 T 22-04-2016 YE2767 dac81a4182183c59726cfe5b23801b14 374 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 10 356 54.896 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 YE2767 dac81a4182183c59726cfe5b23801b14 374 PANTHER PTHR11751 9 352 6.1E-102 T 22-04-2016 YE2767 dac81a4182183c59726cfe5b23801b14 374 SUPERFAMILY SSF53383 6 353 2.13E-80 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YE2767 dac81a4182183c59726cfe5b23801b14 374 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 212 221 - T 22-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 YE2767 dac81a4182183c59726cfe5b23801b14 374 Pfam PF00155 Aminotransferase class I and II 47 352 2.0E-61 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YE2767 dac81a4182183c59726cfe5b23801b14 374 Gene3D G3DSA:3.40.640.10 49 255 4.6E-72 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YE2767 dac81a4182183c59726cfe5b23801b14 374 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 12 353 1.9E-120 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 YE2767 dac81a4182183c59726cfe5b23801b14 374 Gene3D G3DSA:3.90.1150.10 256 353 5.0E-23 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YE2767 dac81a4182183c59726cfe5b23801b14 374 PANTHER PTHR11751:SF398 9 352 6.1E-102 T 22-04-2016 YE1202 e2715104f7ad4cc789396496bef9b9b3 455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 407 1.4E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE1202 e2715104f7ad4cc789396496bef9b9b3 455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 430 1.4E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE1202 e2715104f7ad4cc789396496bef9b9b3 455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 379 393 1.4E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE1202 e2715104f7ad4cc789396496bef9b9b3 455 Gene3D G3DSA:1.10.287.130 222 280 1.4E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE1202 e2715104f7ad4cc789396496bef9b9b3 455 SUPERFAMILY SSF47384 216 296 4.32E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE1202 e2715104f7ad4cc789396496bef9b9b3 455 SUPERFAMILY SSF158472 177 230 9.68E-9 T 22-04-2016 YE1202 e2715104f7ad4cc789396496bef9b9b3 455 Gene3D G3DSA:3.30.565.10 281 450 5.7E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE1202 e2715104f7ad4cc789396496bef9b9b3 455 Pfam PF00672 HAMP domain 163 227 3.9E-14 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YE1202 e2715104f7ad4cc789396496bef9b9b3 455 PANTHER PTHR24423:SF564 170 451 8.1E-115 T 22-04-2016 YE1202 e2715104f7ad4cc789396496bef9b9b3 455 PANTHER PTHR24423:SF564 38 80 8.1E-115 T 22-04-2016 YE1202 e2715104f7ad4cc789396496bef9b9b3 455 SMART SM00387 342 452 4.0E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE1202 e2715104f7ad4cc789396496bef9b9b3 455 PANTHER PTHR24423 170 451 8.1E-115 T 22-04-2016 YE1202 e2715104f7ad4cc789396496bef9b9b3 455 PANTHER PTHR24423 38 80 8.1E-115 T 22-04-2016 YE1202 e2715104f7ad4cc789396496bef9b9b3 455 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 345 449 8.2E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE1202 e2715104f7ad4cc789396496bef9b9b3 455 Pfam PF00512 His Kinase A (phospho-acceptor) domain 233 294 9.4E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE1202 e2715104f7ad4cc789396496bef9b9b3 455 SMART SM00304 176 231 9.5E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YE1202 e2715104f7ad4cc789396496bef9b9b3 455 SUPERFAMILY SSF55874 285 451 7.6E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE1202 e2715104f7ad4cc789396496bef9b9b3 455 SMART SM00388 232 295 1.5E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE1403 2ad48a050179c092243aa4373796fd32 490 SUPERFAMILY SSF103473 6 430 1.31E-28 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE1403 2ad48a050179c092243aa4373796fd32 490 Pfam PF13347 MFS/sugar transport protein 7 427 3.3E-47 T 22-04-2016 YE1403 2ad48a050179c092243aa4373796fd32 490 PANTHER PTHR11328:SF24 3 466 4.4E-118 T 22-04-2016 YE1403 2ad48a050179c092243aa4373796fd32 490 PANTHER PTHR11328 3 466 4.4E-118 T 22-04-2016 YE1403 2ad48a050179c092243aa4373796fd32 490 Gene3D G3DSA:1.20.1250.20 5 186 2.6E-12 T 22-04-2016 YE1403 2ad48a050179c092243aa4373796fd32 490 Gene3D G3DSA:1.20.1250.20 224 420 3.0E-6 T 22-04-2016 YE3190 b0bb2f20c12d90910e925a078c5c622a 372 SUPERFAMILY SSF53807 25 360 3.45E-53 T 22-04-2016 YE3190 b0bb2f20c12d90910e925a078c5c622a 372 PANTHER PTHR30535:SF5 24 369 4.5E-79 T 22-04-2016 YE3190 b0bb2f20c12d90910e925a078c5c622a 372 PANTHER PTHR30535 24 369 4.5E-79 T 22-04-2016 YE3190 b0bb2f20c12d90910e925a078c5c622a 372 Gene3D G3DSA:3.40.50.1980 173 347 2.4E-24 T 22-04-2016 YE3190 b0bb2f20c12d90910e925a078c5c622a 372 Gene3D G3DSA:3.40.50.1980 37 172 4.1E-18 T 22-04-2016 YE3190 b0bb2f20c12d90910e925a078c5c622a 372 Pfam PF01497 Periplasmic binding protein 77 312 1.4E-30 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 YE3911 7f441aa56bd262bd2d84ebb291a6b5d8 179 SUPERFAMILY SSF55282 4 179 3.53E-79 T 22-04-2016 IPR022803 Ribosomal protein L5 domain YE3911 7f441aa56bd262bd2d84ebb291a6b5d8 179 PIRSF PIRSF002161 1 179 3.3E-67 T 22-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 YE3911 7f441aa56bd262bd2d84ebb291a6b5d8 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.774 T 22-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3911 7f441aa56bd262bd2d84ebb291a6b5d8 179 PANTHER PTHR11994 1 178 4.8E-104 T 22-04-2016 YE3911 7f441aa56bd262bd2d84ebb291a6b5d8 179 Gene3D G3DSA:3.30.1440.10 2 179 5.3E-81 T 22-04-2016 IPR022803 Ribosomal protein L5 domain YE3911 7f441aa56bd262bd2d84ebb291a6b5d8 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 1.5E-41 T 22-04-2016 IPR031309 Ribosomal protein L5, C-terminal YE3911 7f441aa56bd262bd2d84ebb291a6b5d8 179 Pfam PF00281 Ribosomal protein L5 24 80 1.3E-28 T 22-04-2016 IPR031310 Ribosomal protein L5, N-terminal YE3338 c2149d1b087b0187d371bf3563ef6ff6 513 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 308 496 1.4E-45 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 YE3338 c2149d1b087b0187d371bf3563ef6ff6 513 Gene3D G3DSA:1.20.120.30 17 155 9.2E-40 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 YE3338 c2149d1b087b0187d371bf3563ef6ff6 513 SUPERFAMILY SSF58104 219 498 7.98E-56 T 22-04-2016 YE3338 c2149d1b087b0187d371bf3563ef6ff6 513 SMART SM00319 25 161 0.0061 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 YE3338 c2149d1b087b0187d371bf3563ef6ff6 513 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 377 406 2.3E-44 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE3338 c2149d1b087b0187d371bf3563ef6ff6 513 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 425 454 2.3E-44 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE3338 c2149d1b087b0187d371bf3563ef6ff6 513 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 271 300 2.3E-44 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE3338 c2149d1b087b0187d371bf3563ef6ff6 513 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 170 190 2.3E-44 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE3338 c2149d1b087b0187d371bf3563ef6ff6 513 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 348 375 2.3E-44 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE3338 c2149d1b087b0187d371bf3563ef6ff6 513 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 41 56 2.3E-44 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE3338 c2149d1b087b0187d371bf3563ef6ff6 513 SMART SM00304 195 249 3.7E-5 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YE3338 c2149d1b087b0187d371bf3563ef6ff6 513 Gene3D G3DSA:1.10.287.950 264 467 1.1E-50 T 22-04-2016 YE3338 c2149d1b087b0187d371bf3563ef6ff6 513 SUPERFAMILY SSF47170 6 155 1.57E-39 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 YE3338 c2149d1b087b0187d371bf3563ef6ff6 513 Pfam PF00672 HAMP domain 175 245 4.0E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YE3338 c2149d1b087b0187d371bf3563ef6ff6 513 SMART SM00283 250 497 1.3E-63 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 YE3338 c2149d1b087b0187d371bf3563ef6ff6 513 PANTHER PTHR32089 126 500 1.0E-117 T 22-04-2016 YE3338 c2149d1b087b0187d371bf3563ef6ff6 513 Pfam PF02203 Tar ligand binding domain homologue 1 152 4.1E-26 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 YE3338 c2149d1b087b0187d371bf3563ef6ff6 513 PANTHER PTHR32089:SF63 126 500 1.0E-117 T 22-04-2016 YE2514 9e4c3415848d30410c9b7b01d32e670f 251 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE2514 9e4c3415848d30410c9b7b01d32e670f 251 PIRSF PIRSF039085 1 249 2.0E-111 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 YE2514 9e4c3415848d30410c9b7b01d32e670f 251 PANTHER PTHR24220:SF327 5 250 2.5E-146 T 22-04-2016 YE2514 9e4c3415848d30410c9b7b01d32e670f 251 PANTHER PTHR24220 5 250 2.5E-146 T 22-04-2016 YE2514 9e4c3415848d30410c9b7b01d32e670f 251 SUPERFAMILY SSF52540 4 243 1.77E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2514 9e4c3415848d30410c9b7b01d32e670f 251 Gene3D G3DSA:3.40.50.300 3 245 1.9E-87 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2514 9e4c3415848d30410c9b7b01d32e670f 251 SMART SM00382 28 221 2.2E-19 T 22-04-2016 IPR003593 AAA+ ATPase domain YE2514 9e4c3415848d30410c9b7b01d32e670f 251 Pfam PF00005 ABC transporter 19 173 3.1E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE2004 8c53d7f37ee8303d6556bf974dfd9e42 492 Pfam PF00005 ABC transporter 4 153 1.1E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE2004 8c53d7f37ee8303d6556bf974dfd9e42 492 Pfam PF00005 ABC transporter 255 408 9.5E-19 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE2004 8c53d7f37ee8303d6556bf974dfd9e42 492 SUPERFAMILY SSF52540 2 208 1.16E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2004 8c53d7f37ee8303d6556bf974dfd9e42 492 Gene3D G3DSA:3.40.50.300 1 206 3.8E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2004 8c53d7f37ee8303d6556bf974dfd9e42 492 Gene3D G3DSA:3.40.50.300 255 472 3.7E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2004 8c53d7f37ee8303d6556bf974dfd9e42 492 ProSitePatterns PS00211 ABC transporters family signature. 381 395 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE2004 8c53d7f37ee8303d6556bf974dfd9e42 492 PANTHER PTHR24220 1 362 1.6E-223 T 22-04-2016 YE2004 8c53d7f37ee8303d6556bf974dfd9e42 492 SUPERFAMILY SSF52540 253 472 1.11E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2004 8c53d7f37ee8303d6556bf974dfd9e42 492 PANTHER PTHR24220:SF516 1 362 1.6E-223 T 22-04-2016 YE2004 8c53d7f37ee8303d6556bf974dfd9e42 492 SMART SM00382 262 457 5.4E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain YE2004 8c53d7f37ee8303d6556bf974dfd9e42 492 SMART SM00382 13 201 1.4E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain YE1132 e22fcd7cc43b3260ea56533d20156559 482 Pfam PF14559 Tetratricopeptide repeat 348 413 3.3E-8 T 22-04-2016 YE1132 e22fcd7cc43b3260ea56533d20156559 482 Gene3D G3DSA:1.25.40.10 301 448 2.3E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YE1132 e22fcd7cc43b3260ea56533d20156559 482 Gene3D G3DSA:3.30.2010.10 62 144 7.1E-17 T 22-04-2016 YE1132 e22fcd7cc43b3260ea56533d20156559 482 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 3 477 31.519 T 22-04-2016 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 YE1132 e22fcd7cc43b3260ea56533d20156559 482 SUPERFAMILY SSF48452 307 421 8.13E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YE1132 e22fcd7cc43b3260ea56533d20156559 482 Pfam PF01435 Peptidase family M48 66 253 2.5E-28 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 YE1132 e22fcd7cc43b3260ea56533d20156559 482 PANTHER PTHR22726 2 345 3.0E-136 T 22-04-2016 YE1132 e22fcd7cc43b3260ea56533d20156559 482 PANTHER PTHR22726:SF10 2 345 3.0E-136 T 22-04-2016 YE3211 d92a626951b41cb3cdbb1cc0189bcc51 366 SUPERFAMILY SSF56059 140 357 4.6E-58 T 22-04-2016 YE3211 d92a626951b41cb3cdbb1cc0189bcc51 366 PANTHER PTHR23132:SF8 3 364 2.9E-172 T 22-04-2016 YE3211 d92a626951b41cb3cdbb1cc0189bcc51 366 PANTHER PTHR23132 3 364 2.9E-172 T 22-04-2016 YE3211 d92a626951b41cb3cdbb1cc0189bcc51 366 Gene3D G3DSA:3.40.50.20 2 129 8.7E-38 T 22-04-2016 IPR016185 Pre-ATP-grasp domain YE3211 d92a626951b41cb3cdbb1cc0189bcc51 366 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 293 321 - T 22-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YE3211 d92a626951b41cb3cdbb1cc0189bcc51 366 Gene3D G3DSA:3.30.470.20 224 363 6.7E-51 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 YE3211 d92a626951b41cb3cdbb1cc0189bcc51 366 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 107 118 - T 22-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YE3211 d92a626951b41cb3cdbb1cc0189bcc51 366 SUPERFAMILY SSF52440 3 139 5.18E-37 T 22-04-2016 IPR016185 Pre-ATP-grasp domain YE3211 d92a626951b41cb3cdbb1cc0189bcc51 366 Pfam PF07478 D-ala D-ala ligase C-terminus 147 348 8.3E-77 T 22-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YE3211 d92a626951b41cb3cdbb1cc0189bcc51 366 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 351 42.482 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YE3211 d92a626951b41cb3cdbb1cc0189bcc51 366 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 350 6.4E-114 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YE3211 d92a626951b41cb3cdbb1cc0189bcc51 366 Pfam PF01820 D-ala D-ala ligase N-terminus 5 130 7.0E-32 T 22-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YE3211 d92a626951b41cb3cdbb1cc0189bcc51 366 Gene3D G3DSA:3.30.1490.20 157 222 4.4E-26 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 YE3211 d92a626951b41cb3cdbb1cc0189bcc51 366 PIRSF PIRSF039102 1 359 3.9E-133 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YE1962 b5d8f348d80552b04c3f1ae28b16bb52 499 Gene3D G3DSA:2.60.40.1180 408 492 7.6E-30 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta YE1962 b5d8f348d80552b04c3f1ae28b16bb52 499 PANTHER PTHR10357 6 110 1.3E-151 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 YE1962 b5d8f348d80552b04c3f1ae28b16bb52 499 PANTHER PTHR10357 141 490 1.3E-151 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 YE1962 b5d8f348d80552b04c3f1ae28b16bb52 499 Gene3D G3DSA:3.20.20.80 2 407 3.1E-73 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 YE1962 b5d8f348d80552b04c3f1ae28b16bb52 499 SUPERFAMILY SSF51011 405 491 2.16E-28 T 22-04-2016 YE1962 b5d8f348d80552b04c3f1ae28b16bb52 499 PANTHER PTHR10357:SF156 6 110 1.3E-151 T 22-04-2016 YE1962 b5d8f348d80552b04c3f1ae28b16bb52 499 PANTHER PTHR10357:SF156 141 490 1.3E-151 T 22-04-2016 YE1962 b5d8f348d80552b04c3f1ae28b16bb52 499 SUPERFAMILY SSF51445 6 404 2.46E-94 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YE1962 b5d8f348d80552b04c3f1ae28b16bb52 499 SMART SM00642 4 402 1.8E-55 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 YE1962 b5d8f348d80552b04c3f1ae28b16bb52 499 Pfam PF00128 Alpha amylase, catalytic domain 22 369 7.5E-26 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 YE1962 b5d8f348d80552b04c3f1ae28b16bb52 499 PIRSF PIRSF001021 1 494 2.1E-203 T 22-04-2016 IPR013776 Alpha-amylase, thermostable GO:0004553|GO:0005509|GO:0005975 KEGG: 00500+3.2.1.1 YE0378 4152ea0aa892b47f7d95e3274c7f5767 433 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 8.0E-29 T 22-04-2016 IPR025121 GTPase HflX, N-terminal YE0378 4152ea0aa892b47f7d95e3274c7f5767 433 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 1.8E-9 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YE0378 4152ea0aa892b47f7d95e3274c7f5767 433 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 1.8E-9 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YE0378 4152ea0aa892b47f7d95e3274c7f5767 433 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 1.8E-9 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YE0378 4152ea0aa892b47f7d95e3274c7f5767 433 Hamap MF_00900 GTPase HflX [hflX]. 27 390 46.248 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 YE0378 4152ea0aa892b47f7d95e3274c7f5767 433 Pfam PF01926 50S ribosome-binding GTPase 200 318 9.1E-20 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YE0378 4152ea0aa892b47f7d95e3274c7f5767 433 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 361 1.9E-150 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 YE0378 4152ea0aa892b47f7d95e3274c7f5767 433 Gene3D G3DSA:3.40.50.300 197 361 3.6E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0378 4152ea0aa892b47f7d95e3274c7f5767 433 SUPERFAMILY SSF52540 197 375 1.26E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0378 4152ea0aa892b47f7d95e3274c7f5767 433 PANTHER PTHR10229:SF0 1 430 8.2E-181 T 22-04-2016 YE0378 4152ea0aa892b47f7d95e3274c7f5767 433 PANTHER PTHR10229 1 430 8.2E-181 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 YE0378 4152ea0aa892b47f7d95e3274c7f5767 433 SUPERFAMILY SSF54980 366 422 5.75E-14 T 22-04-2016 IPR009022 Elongation factor G, III-V domain YE0378 4152ea0aa892b47f7d95e3274c7f5767 433 PIRSF PIRSF006809 4 422 8.1E-146 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 YE0378 4152ea0aa892b47f7d95e3274c7f5767 433 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 2.3E-28 T 22-04-2016 IPR032305 GTP-binding protein, middle domain YE2471 e0de96d8e46aae6b6a66fd881598396b 482 PIRSF PIRSF006446 2 462 3.7E-229 T 22-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 YE2471 e0de96d8e46aae6b6a66fd881598396b 482 PANTHER PTHR30365 1 456 1.6E-288 T 22-04-2016 YE2471 e0de96d8e46aae6b6a66fd881598396b 482 PANTHER PTHR30365:SF8 1 456 1.6E-288 T 22-04-2016 YE2471 e0de96d8e46aae6b6a66fd881598396b 482 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 437 8.1E-170 T 22-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 YE0413 04a8818ab8c3c79611538e19dc06da3c 156 Pfam PF02863 Arginine repressor, C-terminal domain 82 148 3.4E-21 T 22-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 YE0413 04a8818ab8c3c79611538e19dc06da3c 156 Gene3D G3DSA:1.10.10.10 2 77 8.3E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0413 04a8818ab8c3c79611538e19dc06da3c 156 Gene3D G3DSA:3.30.1360.40 80 154 2.4E-25 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain YE0413 04a8818ab8c3c79611538e19dc06da3c 156 PANTHER PTHR34471:SF1 2 156 2.5E-68 T 22-04-2016 YE0413 04a8818ab8c3c79611538e19dc06da3c 156 TIGRFAM TIGR01529 argR_whole: arginine repressor 11 151 1.9E-45 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 YE0413 04a8818ab8c3c79611538e19dc06da3c 156 SUPERFAMILY SSF46785 3 77 8.98E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0413 04a8818ab8c3c79611538e19dc06da3c 156 SUPERFAMILY SSF55252 82 151 2.35E-18 T 22-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 YE0413 04a8818ab8c3c79611538e19dc06da3c 156 PANTHER PTHR34471 2 156 2.5E-68 T 22-04-2016 YE0413 04a8818ab8c3c79611538e19dc06da3c 156 PRINTS PR01467 Bacterial arginine repressor signature 121 136 2.5E-23 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 YE0413 04a8818ab8c3c79611538e19dc06da3c 156 PRINTS PR01467 Bacterial arginine repressor signature 90 103 2.5E-23 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 YE0413 04a8818ab8c3c79611538e19dc06da3c 156 PRINTS PR01467 Bacterial arginine repressor signature 25 38 2.5E-23 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 YE0413 04a8818ab8c3c79611538e19dc06da3c 156 PRINTS PR01467 Bacterial arginine repressor signature 42 57 2.5E-23 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 YE0413 04a8818ab8c3c79611538e19dc06da3c 156 Hamap MF_00173 Arginine repressor [argR]. 1 155 59.237 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 YE0413 04a8818ab8c3c79611538e19dc06da3c 156 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 153 7.0E-31 T 22-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 YE0413 04a8818ab8c3c79611538e19dc06da3c 156 Pfam PF01316 Arginine repressor, DNA binding domain 6 74 6.2E-25 T 22-04-2016 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 UniPathway: UPA00068 YE3799 8ea247f3c5bbd36c96c93f2825637470 286 PANTHER PTHR23088:SF27 1 270 1.3E-108 T 22-04-2016 YE3799 8ea247f3c5bbd36c96c93f2825637470 286 Pfam PF00795 Carbon-nitrogen hydrolase 6 241 4.9E-48 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 YE3799 8ea247f3c5bbd36c96c93f2825637470 286 SUPERFAMILY SSF56317 2 267 4.71E-72 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 YE3799 8ea247f3c5bbd36c96c93f2825637470 286 PANTHER PTHR23088 1 270 1.3E-108 T 22-04-2016 YE3799 8ea247f3c5bbd36c96c93f2825637470 286 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 153 173 - T 22-04-2016 IPR001110 Uncharacterised protein family UPF0012, conserved site YE3799 8ea247f3c5bbd36c96c93f2825637470 286 Gene3D G3DSA:3.60.110.10 1 270 9.8E-76 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 YE3345 8699e79115a2182f487e286824a171c3 120 Pfam PF02501 Type II secretion system (T2SS), protein I 40 115 7.6E-12 T 22-04-2016 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 YE3345 8699e79115a2182f487e286824a171c3 120 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 22 6.0E-4 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site YE3345 8699e79115a2182f487e286824a171c3 120 PANTHER PTHR38779 1 120 1.8E-26 T 22-04-2016 YE3345 8699e79115a2182f487e286824a171c3 120 TIGRFAM TIGR01707 gspI: type II secretion system protein I 6 102 1.1E-17 T 22-04-2016 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 YE3345 8699e79115a2182f487e286824a171c3 120 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 23 1.4E-4 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site YE3345 8699e79115a2182f487e286824a171c3 120 PANTHER PTHR38779:SF2 1 120 1.8E-26 T 22-04-2016 YE3345 8699e79115a2182f487e286824a171c3 120 SUPERFAMILY SSF54523 38 116 8.63E-19 T 22-04-2016 YE3345 8699e79115a2182f487e286824a171c3 120 Gene3D G3DSA:3.30.1300.30 33 116 3.7E-21 T 22-04-2016 YE3942 ee878ecb823cd5883ebc0c75e8086573 638 PANTHER PTHR19211:SF49 1 555 0.0 T 22-04-2016 YE3942 ee878ecb823cd5883ebc0c75e8086573 638 SUPERFAMILY SSF52540 119 255 2.83E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3942 ee878ecb823cd5883ebc0c75e8086573 638 SUPERFAMILY SSF52540 2 92 2.83E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3942 ee878ecb823cd5883ebc0c75e8086573 638 Pfam PF00005 ABC transporter 328 459 2.6E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE3942 ee878ecb823cd5883ebc0c75e8086573 638 Pfam PF00005 ABC transporter 17 178 5.9E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE3942 ee878ecb823cd5883ebc0c75e8086573 638 PANTHER PTHR19211 1 555 0.0 T 22-04-2016 YE3942 ee878ecb823cd5883ebc0c75e8086573 638 SUPERFAMILY SSF52540 294 518 1.02E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3942 ee878ecb823cd5883ebc0c75e8086573 638 Gene3D G3DSA:3.40.50.300 1 265 8.6E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3942 ee878ecb823cd5883ebc0c75e8086573 638 Gene3D G3DSA:3.40.50.300 311 532 5.7E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3942 ee878ecb823cd5883ebc0c75e8086573 638 Pfam PF12848 ABC transporter 217 296 1.2E-28 T 22-04-2016 IPR032781 ABC-transporter extension domain YE3942 ee878ecb823cd5883ebc0c75e8086573 638 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE3942 ee878ecb823cd5883ebc0c75e8086573 638 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE3942 ee878ecb823cd5883ebc0c75e8086573 638 SMART SM00382 26 223 3.7E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain YE3942 ee878ecb823cd5883ebc0c75e8086573 638 SMART SM00382 337 506 4.7E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain YE4053 e3335766a978aab5480df83d48592422 252 PANTHER PTHR36112 3 249 3.0E-146 T 22-04-2016 YE4053 e3335766a978aab5480df83d48592422 252 Gene3D G3DSA:3.40.1630.10 5 59 6.7E-28 T 22-04-2016 YE4053 e3335766a978aab5480df83d48592422 252 PANTHER PTHR36112:SF1 3 249 3.0E-146 T 22-04-2016 YE4053 e3335766a978aab5480df83d48592422 252 Gene3D G3DSA:3.40.50.150 60 250 1.7E-75 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE4053 e3335766a978aab5480df83d48592422 252 Pfam PF04445 Putative SAM-dependent methyltransferase 22 249 4.2E-109 T 22-04-2016 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 YE4053 e3335766a978aab5480df83d48592422 252 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 6 251 38.603 T 22-04-2016 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 YE4053 e3335766a978aab5480df83d48592422 252 SUPERFAMILY SSF53335 9 249 1.73E-75 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE1471 9eddefa970995907a7f6f4fae4cb6dda 405 PANTHER PTHR21581:SF4 1 404 7.8E-303 T 22-04-2016 YE1471 9eddefa970995907a7f6f4fae4cb6dda 405 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 41 274 4.0E-97 T 22-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 YE1471 9eddefa970995907a7f6f4fae4cb6dda 405 SUPERFAMILY SSF56601 17 294 2.47E-81 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YE1471 9eddefa970995907a7f6f4fae4cb6dda 405 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 74 85 1.4E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 YE1471 9eddefa970995907a7f6f4fae4cb6dda 405 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 160 173 1.4E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 YE1471 9eddefa970995907a7f6f4fae4cb6dda 405 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 133 150 1.4E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 YE1471 9eddefa970995907a7f6f4fae4cb6dda 405 PANTHER PTHR21581 1 404 7.8E-303 T 22-04-2016 YE1471 9eddefa970995907a7f6f4fae4cb6dda 405 SUPERFAMILY SSF69189 294 387 6.47E-24 T 22-04-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 YE1471 9eddefa970995907a7f6f4fae4cb6dda 405 Gene3D G3DSA:3.40.710.10 40 293 8.5E-96 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YE1471 9eddefa970995907a7f6f4fae4cb6dda 405 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 294 385 2.9E-20 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 YE1471 9eddefa970995907a7f6f4fae4cb6dda 405 Gene3D G3DSA:2.60.410.10 294 385 5.8E-29 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 YE1471 9eddefa970995907a7f6f4fae4cb6dda 405 SMART SM00936 294 385 1.0E-30 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 YE2590 9ada91f7eb5af6e6a8aa0dfe417ef213 70 Gene3D G3DSA:2.40.50.140 4 68 4.4E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE2590 9ada91f7eb5af6e6a8aa0dfe417ef213 70 PRINTS PR00050 Cold shock protein signature 28 37 1.9E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YE2590 9ada91f7eb5af6e6a8aa0dfe417ef213 70 PRINTS PR00050 Cold shock protein signature 43 61 1.9E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YE2590 9ada91f7eb5af6e6a8aa0dfe417ef213 70 PRINTS PR00050 Cold shock protein signature 7 22 1.9E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YE2590 9ada91f7eb5af6e6a8aa0dfe417ef213 70 SMART SM00357 6 70 1.1E-30 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 YE2590 9ada91f7eb5af6e6a8aa0dfe417ef213 70 SUPERFAMILY SSF50249 2 69 1.43E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE2590 9ada91f7eb5af6e6a8aa0dfe417ef213 70 PANTHER PTHR11544:SF65 1 70 8.7E-45 T 22-04-2016 YE2590 9ada91f7eb5af6e6a8aa0dfe417ef213 70 PIRSF PIRSF002599 1 70 1.3E-26 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 YE2590 9ada91f7eb5af6e6a8aa0dfe417ef213 70 PANTHER PTHR11544 1 70 8.7E-45 T 22-04-2016 YE2590 9ada91f7eb5af6e6a8aa0dfe417ef213 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 22-04-2016 IPR019844 Cold-shock conserved site YE2590 9ada91f7eb5af6e6a8aa0dfe417ef213 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 3.3E-33 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YE1947 41c9caf4ee7f02cd408c9282bdd18f0c 278 Gene3D G3DSA:3.40.50.1820 2 255 2.8E-54 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE1947 41c9caf4ee7f02cd408c9282bdd18f0c 278 PANTHER PTHR10992 1 257 1.5E-40 T 22-04-2016 YE1947 41c9caf4ee7f02cd408c9282bdd18f0c 278 Hamap MF_00832 Putative aminoacrylate hydrolase RutD [rutD]. 1 258 50.353 T 22-04-2016 IPR019913 Pyrimidine utilisation protein RutD GO:0006212|GO:0016811 YE1947 41c9caf4ee7f02cd408c9282bdd18f0c 278 Pfam PF00561 alpha/beta hydrolase fold 15 115 7.1E-16 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 YE1947 41c9caf4ee7f02cd408c9282bdd18f0c 278 TIGRFAM TIGR03611 RutD: pyrimidine utilization protein D 1 255 1.8E-104 T 22-04-2016 IPR019913 Pyrimidine utilisation protein RutD GO:0006212|GO:0016811 YE1947 41c9caf4ee7f02cd408c9282bdd18f0c 278 SUPERFAMILY SSF53474 1 255 5.02E-58 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE1947 41c9caf4ee7f02cd408c9282bdd18f0c 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 39 54 6.3E-10 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 YE1947 41c9caf4ee7f02cd408c9282bdd18f0c 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 98 111 6.3E-10 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 YE1947 41c9caf4ee7f02cd408c9282bdd18f0c 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 84 97 6.3E-10 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 YE1947 41c9caf4ee7f02cd408c9282bdd18f0c 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 201 215 6.3E-10 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 YE2410a a614e2f381a0122b83c96da52277fb43 213 PANTHER PTHR38768:SF1 1 213 1.1E-83 T 22-04-2016 YE2410a a614e2f381a0122b83c96da52277fb43 213 PANTHER PTHR38768 1 213 1.1E-83 T 22-04-2016 YE2410a a614e2f381a0122b83c96da52277fb43 213 Gene3D G3DSA:1.10.10.10 3 85 6.1E-40 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2410a a614e2f381a0122b83c96da52277fb43 213 SUPERFAMILY SSF46785 3 82 9.35E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2410a a614e2f381a0122b83c96da52277fb43 213 Pfam PF04337 Protein of unknown function, DUF480 5 156 3.0E-62 T 22-04-2016 IPR007432 Protein of unknown function DUF480 YE2410a a614e2f381a0122b83c96da52277fb43 213 Gene3D G3DSA:1.10.10.10 93 169 1.9E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2410a a614e2f381a0122b83c96da52277fb43 213 Hamap MF_01584 UPF0502 protein YceH [yceH]. 5 209 33.888 T 22-04-2016 IPR007432 Protein of unknown function DUF480 YE2410a a614e2f381a0122b83c96da52277fb43 213 SUPERFAMILY SSF46785 88 169 1.73E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3057 6d5841a9889e1a803317f944dee5f8b6 289 PANTHER PTHR10438:SF288 7 134 8.7E-67 T 22-04-2016 YE3057 6d5841a9889e1a803317f944dee5f8b6 289 Gene3D G3DSA:1.25.40.10 110 201 1.4E-32 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YE3057 6d5841a9889e1a803317f944dee5f8b6 289 Pfam PF14559 Tetratricopeptide repeat 124 195 4.1E-20 T 22-04-2016 YE3057 6d5841a9889e1a803317f944dee5f8b6 289 SUPERFAMILY SSF52833 4 113 7.75E-30 T 22-04-2016 IPR012336 Thioredoxin-like fold YE3057 6d5841a9889e1a803317f944dee5f8b6 289 Gene3D G3DSA:3.40.30.10 6 109 3.6E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold YE3057 6d5841a9889e1a803317f944dee5f8b6 289 Pfam PF00085 Thioredoxin 8 107 9.1E-18 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 YE3057 6d5841a9889e1a803317f944dee5f8b6 289 Pfam PF14561 Tetratricopeptide repeat 200 289 2.2E-30 T 22-04-2016 YE3057 6d5841a9889e1a803317f944dee5f8b6 289 PANTHER PTHR10438 7 134 8.7E-67 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 YE3057 6d5841a9889e1a803317f944dee5f8b6 289 SUPERFAMILY SSF48452 120 242 3.16E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YE3057 6d5841a9889e1a803317f944dee5f8b6 289 Gene3D G3DSA:1.25.40.10 202 289 8.6E-34 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YE0740 a711591ee52784ad46493285ed019d09 505 Hamap MF_00030 Deoxyguanosinetriphosphate triphosphohydrolase [dgt]. 1 505 52.514 T 22-04-2016 IPR020779 Deoxyguanosinetriphosphate triphosphohydrolase, proteobacteria GO:0000287|GO:0006203|GO:0008832 KEGG: 00230+3.1.5.1 YE0740 a711591ee52784ad46493285ed019d09 505 SMART SM00471 62 282 1.9E-11 T 22-04-2016 IPR003607 HD/PDEase domain YE0740 a711591ee52784ad46493285ed019d09 505 Pfam PF01966 HD domain 66 134 2.3E-10 T 22-04-2016 IPR006674 HD domain YE0740 a711591ee52784ad46493285ed019d09 505 PANTHER PTHR11373 182 285 1.1E-97 T 22-04-2016 YE0740 a711591ee52784ad46493285ed019d09 505 PANTHER PTHR11373 4 142 1.1E-97 T 22-04-2016 YE0740 a711591ee52784ad46493285ed019d09 505 Gene3D G3DSA:1.10.3210.10 183 268 4.1E-67 T 22-04-2016 IPR006674 HD domain YE0740 a711591ee52784ad46493285ed019d09 505 Gene3D G3DSA:1.10.3210.10 4 122 4.1E-67 T 22-04-2016 IPR006674 HD domain YE0740 a711591ee52784ad46493285ed019d09 505 SUPERFAMILY SSF109604 251 432 2.46E-63 T 22-04-2016 YE0740 a711591ee52784ad46493285ed019d09 505 SUPERFAMILY SSF109604 182 215 2.46E-63 T 22-04-2016 YE0740 a711591ee52784ad46493285ed019d09 505 SUPERFAMILY SSF109604 484 502 2.46E-63 T 22-04-2016 YE0740 a711591ee52784ad46493285ed019d09 505 SUPERFAMILY SSF109604 30 134 2.46E-63 T 22-04-2016 YE0740 a711591ee52784ad46493285ed019d09 505 Gene3D G3DSA:1.10.3550.10 391 503 9.1E-34 T 22-04-2016 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain YE0740 a711591ee52784ad46493285ed019d09 505 Gene3D G3DSA:1.10.3550.10 123 156 9.1E-34 T 22-04-2016 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain YE0740 a711591ee52784ad46493285ed019d09 505 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 31 503 8.9E-125 T 22-04-2016 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 YE0740 a711591ee52784ad46493285ed019d09 505 Gene3D G3DSA:1.10.3410.10 269 390 4.4E-34 T 22-04-2016 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain YE0740 a711591ee52784ad46493285ed019d09 505 Pfam PF13286 Phosphohydrolase-associated domain 464 500 5.7E-6 T 22-04-2016 IPR026875 Phosphohydrolase-associated domain YE0740 a711591ee52784ad46493285ed019d09 505 PANTHER PTHR11373:SF29 182 285 1.1E-97 T 22-04-2016 YE0740 a711591ee52784ad46493285ed019d09 505 PANTHER PTHR11373:SF29 4 142 1.1E-97 T 22-04-2016 YE2769 4e63d14674d3ee31ae3ac65708c11ca1 196 SUPERFAMILY SSF52317 3 195 3.97E-53 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YE2769 4e63d14674d3ee31ae3ac65708c11ca1 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 72 83 9.7E-5 T 22-04-2016 YE2769 4e63d14674d3ee31ae3ac65708c11ca1 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 174 187 9.7E-5 T 22-04-2016 YE2769 4e63d14674d3ee31ae3ac65708c11ca1 196 PIRSF PIRSF000495 1 196 1.2E-63 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 YE2769 4e63d14674d3ee31ae3ac65708c11ca1 196 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 2 196 33.74 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 YE2769 4e63d14674d3ee31ae3ac65708c11ca1 196 PANTHER PTHR21235:SF1 2 196 1.6E-90 T 22-04-2016 YE2769 4e63d14674d3ee31ae3ac65708c11ca1 196 Pfam PF00117 Glutamine amidotransferase class-I 34 194 1.2E-17 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 YE2769 4e63d14674d3ee31ae3ac65708c11ca1 196 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 3 196 1.4E-69 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 YE2769 4e63d14674d3ee31ae3ac65708c11ca1 196 PANTHER PTHR21235 2 196 1.6E-90 T 22-04-2016 YE2769 4e63d14674d3ee31ae3ac65708c11ca1 196 Gene3D G3DSA:3.40.50.880 1 196 7.9E-71 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YE3155 626498a88860f60015ebd5ff195f1d78 619 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 619 45.961 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 YE3155 626498a88860f60015ebd5ff195f1d78 619 SUPERFAMILY SSF52922 491 618 4.84E-32 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 YE3155 626498a88860f60015ebd5ff195f1d78 619 Pfam PF02779 Transketolase, pyrimidine binding domain 320 479 2.6E-39 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain YE3155 626498a88860f60015ebd5ff195f1d78 619 Gene3D G3DSA:3.40.50.970 335 494 6.2E-37 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE3155 626498a88860f60015ebd5ff195f1d78 619 SMART SM00861 319 483 1.2E-65 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain YE3155 626498a88860f60015ebd5ff195f1d78 619 Pfam PF02780 Transketolase, C-terminal domain 494 610 1.5E-24 T 22-04-2016 IPR033248 Transketolase, C-terminal domain YE3155 626498a88860f60015ebd5ff195f1d78 619 PANTHER PTHR11624 24 218 0.0 T 22-04-2016 IPR033247 Transketolase family YE3155 626498a88860f60015ebd5ff195f1d78 619 PANTHER PTHR11624 241 619 0.0 T 22-04-2016 IPR033247 Transketolase family YE3155 626498a88860f60015ebd5ff195f1d78 619 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 618 0.0 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 YE3155 626498a88860f60015ebd5ff195f1d78 619 SUPERFAMILY SSF52518 243 381 1.52E-76 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE3155 626498a88860f60015ebd5ff195f1d78 619 SUPERFAMILY SSF52518 9 199 1.52E-76 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE3155 626498a88860f60015ebd5ff195f1d78 619 Gene3D G3DSA:3.40.50.920 495 618 1.3E-34 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 YE3155 626498a88860f60015ebd5ff195f1d78 619 Gene3D G3DSA:3.40.50.970 242 334 1.5E-76 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE3155 626498a88860f60015ebd5ff195f1d78 619 Gene3D G3DSA:3.40.50.970 26 201 1.5E-76 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE3155 626498a88860f60015ebd5ff195f1d78 619 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 14 282 4.6E-118 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 YE3155 626498a88860f60015ebd5ff195f1d78 619 SUPERFAMILY SSF52518 316 503 2.95E-60 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE3155 626498a88860f60015ebd5ff195f1d78 619 PANTHER PTHR11624:SF20 24 218 0.0 T 22-04-2016 YE3155 626498a88860f60015ebd5ff195f1d78 619 PANTHER PTHR11624:SF20 241 619 0.0 T 22-04-2016 YE3155 626498a88860f60015ebd5ff195f1d78 619 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 22-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 YE3257 df6a51508c312651af695cfe837e42ef 235 SUPERFAMILY SSF118196 1 230 5.36E-85 T 22-04-2016 IPR023370 TsaA-like domain YE3257 df6a51508c312651af695cfe837e42ef 235 Gene3D G3DSA:2.40.30.70 5 156 4.0E-52 T 22-04-2016 IPR023370 TsaA-like domain YE3257 df6a51508c312651af695cfe837e42ef 235 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 2 149 2.3E-57 T 22-04-2016 IPR023370 TsaA-like domain YE3257 df6a51508c312651af695cfe837e42ef 235 PANTHER PTHR12818 1 235 3.5E-139 T 22-04-2016 YE3257 df6a51508c312651af695cfe837e42ef 235 PANTHER PTHR12818:SF6 1 235 3.5E-139 T 22-04-2016 YE3257 df6a51508c312651af695cfe837e42ef 235 Pfam PF01980 Uncharacterised protein family UPF0066 21 142 2.0E-40 T 22-04-2016 IPR023370 TsaA-like domain YE3257 df6a51508c312651af695cfe837e42ef 235 ProSitePatterns PS01318 TsaA-like domain signature. 87 98 - T 22-04-2016 IPR023368 Uncharacterised protein family UPF0066, conserved site YE2432 90280e65f4cc3424ddc9d858082407dc 420 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 417 4.5E-159 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 YE2432 90280e65f4cc3424ddc9d858082407dc 420 SUPERFAMILY SSF51735 162 315 7.1E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2432 90280e65f4cc3424ddc9d858082407dc 420 PANTHER PTHR21089:SF3 272 359 1.9E-153 T 22-04-2016 YE2432 90280e65f4cc3424ddc9d858082407dc 420 PANTHER PTHR21089:SF3 18 256 1.9E-153 T 22-04-2016 YE2432 90280e65f4cc3424ddc9d858082407dc 420 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 156 1.1E-49 T 22-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 YE2432 90280e65f4cc3424ddc9d858082407dc 420 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 320 416 2.1E-24 T 22-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 YE2432 90280e65f4cc3424ddc9d858082407dc 420 SUPERFAMILY SSF69075 317 418 2.75E-28 T 22-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 YE2432 90280e65f4cc3424ddc9d858082407dc 420 SUPERFAMILY SSF69742 1 158 1.7E-47 T 22-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 YE2432 90280e65f4cc3424ddc9d858082407dc 420 Gene3D G3DSA:3.40.50.720 184 358 1.1E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2432 90280e65f4cc3424ddc9d858082407dc 420 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 99 122 - T 22-04-2016 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 YE2432 90280e65f4cc3424ddc9d858082407dc 420 PIRSF PIRSF000445 1 420 8.7E-157 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 YE2432 90280e65f4cc3424ddc9d858082407dc 420 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 172 306 3.0E-49 T 22-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase YE2432 90280e65f4cc3424ddc9d858082407dc 420 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 418 30.819 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 YE2432 90280e65f4cc3424ddc9d858082407dc 420 PANTHER PTHR21089 272 359 1.9E-153 T 22-04-2016 YE2432 90280e65f4cc3424ddc9d858082407dc 420 PANTHER PTHR21089 18 256 1.9E-153 T 22-04-2016 YE2487 7bb2deadab019e55a4bf553ef7537507 208 SUPERFAMILY SSF55186 84 202 2.49E-24 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 YE2487 7bb2deadab019e55a4bf553ef7537507 208 Pfam PF01411 tRNA synthetases class II (A) 23 65 1.9E-5 T 22-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 YE2487 7bb2deadab019e55a4bf553ef7537507 208 PANTHER PTHR11777 1 208 8.8E-40 T 22-04-2016 YE2487 7bb2deadab019e55a4bf553ef7537507 208 SUPERFAMILY SSF50447 2 72 2.4E-12 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain YE2487 7bb2deadab019e55a4bf553ef7537507 208 PANTHER PTHR11777:SF7 1 208 8.8E-40 T 22-04-2016 YE2487 7bb2deadab019e55a4bf553ef7537507 208 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 165 198 1.3E-4 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 YE0865 5255d2148a5fd943b2279bc2f2b378e1 109 Pfam PF04606 Ogr/Delta-like zinc finger 29 74 1.1E-15 T 22-04-2016 IPR007684 Zinc finger, Ogr/Delta-type YE1900 28055459ec662383b5bd28a13a0f6ae7 322 Pfam PF01297 Zinc-uptake complex component A periplasmic 55 318 1.1E-80 T 22-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 YE1900 28055459ec662383b5bd28a13a0f6ae7 322 PANTHER PTHR30477 10 318 5.4E-169 T 22-04-2016 YE1900 28055459ec662383b5bd28a13a0f6ae7 322 PRINTS PR00690 Adhesin family signature 96 113 5.0E-46 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 YE1900 28055459ec662383b5bd28a13a0f6ae7 322 PRINTS PR00690 Adhesin family signature 83 96 5.0E-46 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 YE1900 28055459ec662383b5bd28a13a0f6ae7 322 PRINTS PR00690 Adhesin family signature 207 228 5.0E-46 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 YE1900 28055459ec662383b5bd28a13a0f6ae7 322 PRINTS PR00690 Adhesin family signature 286 305 5.0E-46 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 YE1900 28055459ec662383b5bd28a13a0f6ae7 322 PRINTS PR00690 Adhesin family signature 52 70 5.0E-46 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 YE1900 28055459ec662383b5bd28a13a0f6ae7 322 PRINTS PR00690 Adhesin family signature 260 278 5.0E-46 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 YE1900 28055459ec662383b5bd28a13a0f6ae7 322 PRINTS PR00691 Adhesin B signature 278 296 1.2E-38 T 22-04-2016 IPR006129 Adhesin B GO:0007155 YE1900 28055459ec662383b5bd28a13a0f6ae7 322 PRINTS PR00691 Adhesin B signature 233 251 1.2E-38 T 22-04-2016 IPR006129 Adhesin B GO:0007155 YE1900 28055459ec662383b5bd28a13a0f6ae7 322 PRINTS PR00691 Adhesin B signature 52 73 1.2E-38 T 22-04-2016 IPR006129 Adhesin B GO:0007155 YE1900 28055459ec662383b5bd28a13a0f6ae7 322 PRINTS PR00691 Adhesin B signature 256 273 1.2E-38 T 22-04-2016 IPR006129 Adhesin B GO:0007155 YE1900 28055459ec662383b5bd28a13a0f6ae7 322 PRINTS PR00691 Adhesin B signature 77 95 1.2E-38 T 22-04-2016 IPR006129 Adhesin B GO:0007155 YE1900 28055459ec662383b5bd28a13a0f6ae7 322 PRINTS PR00691 Adhesin B signature 96 115 1.2E-38 T 22-04-2016 IPR006129 Adhesin B GO:0007155 YE1900 28055459ec662383b5bd28a13a0f6ae7 322 PRINTS PR00691 Adhesin B signature 207 224 1.2E-38 T 22-04-2016 IPR006129 Adhesin B GO:0007155 YE1900 28055459ec662383b5bd28a13a0f6ae7 322 PANTHER PTHR30477:SF12 10 318 5.4E-169 T 22-04-2016 YE1900 28055459ec662383b5bd28a13a0f6ae7 322 SUPERFAMILY SSF53807 49 321 1.32E-92 T 22-04-2016 YE1900 28055459ec662383b5bd28a13a0f6ae7 322 Gene3D G3DSA:3.40.50.1980 48 199 2.0E-53 T 22-04-2016 YE1900 28055459ec662383b5bd28a13a0f6ae7 322 Gene3D G3DSA:3.40.50.1980 200 321 5.0E-44 T 22-04-2016 YE1354 a60e009a1e690ea978f72d359d7a5c51 614 PANTHER PTHR22773 1 569 8.5E-243 T 22-04-2016 YE1354 a60e009a1e690ea978f72d359d7a5c51 614 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 2 611 3.7E-232 T 22-04-2016 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 YE1354 a60e009a1e690ea978f72d359d7a5c51 614 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 67 124 6.4E-24 T 22-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal YE1354 a60e009a1e690ea978f72d359d7a5c51 614 PANTHER PTHR22773:SF50 1 569 8.5E-243 T 22-04-2016 YE1354 a60e009a1e690ea978f72d359d7a5c51 614 Pfam PF00361 Proton-conducting membrane transporter 136 428 2.9E-95 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 YE1354 a60e009a1e690ea978f72d359d7a5c51 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 250 276 1.7E-56 T 22-04-2016 YE1354 a60e009a1e690ea978f72d359d7a5c51 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 160 181 1.7E-56 T 22-04-2016 YE1354 a60e009a1e690ea978f72d359d7a5c51 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 421 440 1.7E-56 T 22-04-2016 YE1354 a60e009a1e690ea978f72d359d7a5c51 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 85 110 1.7E-56 T 22-04-2016 YE1354 a60e009a1e690ea978f72d359d7a5c51 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 318 330 1.7E-56 T 22-04-2016 YE1354 a60e009a1e690ea978f72d359d7a5c51 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 228 249 1.7E-56 T 22-04-2016 YE1354 a60e009a1e690ea978f72d359d7a5c51 614 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 113 133 1.7E-56 T 22-04-2016 YE1354 a60e009a1e690ea978f72d359d7a5c51 614 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 268 290 2.1E-10 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 YE1354 a60e009a1e690ea978f72d359d7a5c51 614 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 87 107 2.1E-10 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 YE1354 a60e009a1e690ea978f72d359d7a5c51 614 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 420 442 2.1E-10 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 YE1354 a60e009a1e690ea978f72d359d7a5c51 614 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 61 85 2.1E-10 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 YE1346 70658613e451c063ed8503ac0891ff66 598 SUPERFAMILY SSF143243 24 228 4.18E-60 T 22-04-2016 YE1346 70658613e451c063ed8503ac0891ff66 598 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 24 184 24.818 T 22-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 YE1346 70658613e451c063ed8503ac0891ff66 598 SUPERFAMILY SSF56762 224 598 1.11E-121 T 22-04-2016 IPR029014 NiFe hydrogenase-like YE1346 70658613e451c063ed8503ac0891ff66 598 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 104 159 1.0E-26 T 22-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 YE1346 70658613e451c063ed8503ac0891ff66 598 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 48 175 1.2E-45 T 22-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 YE1346 70658613e451c063ed8503ac0891ff66 598 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 210 598 41.953 T 22-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 YE1346 70658613e451c063ed8503ac0891ff66 598 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 251 262 - T 22-04-2016 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 YE1346 70658613e451c063ed8503ac0891ff66 598 PANTHER PTHR11993 146 593 0.0 T 22-04-2016 YE1346 70658613e451c063ed8503ac0891ff66 598 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 49 177 8.3E-42 T 22-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 YE1346 70658613e451c063ed8503ac0891ff66 598 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 328 598 2.1E-104 T 22-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 YE1346 70658613e451c063ed8503ac0891ff66 598 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 214 598 1.3E-175 T 22-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 YE1346 70658613e451c063ed8503ac0891ff66 598 Gene3D G3DSA:1.10.645.10 215 577 1.8E-47 T 22-04-2016 IPR029014 NiFe hydrogenase-like YE1346 70658613e451c063ed8503ac0891ff66 598 PANTHER PTHR11993:SF28 146 593 0.0 T 22-04-2016 YE1346 70658613e451c063ed8503ac0891ff66 598 Hamap MF_01359 NADH-quinone oxidoreductase subunit C/D [nuoC]. 15 598 72.358 T 22-04-2016 IPR023062 NADH dehydrogenase, subunit CD GO:0030964|GO:0050136|GO:0055114 KEGG: 00190+1.6.5.11 YE3798 9132a9521488f34ce1cdbe3d829201e4 481 PIRSF PIRSF004919 14 481 2.0E-146 T 22-04-2016 IPR025502 TldD KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- YE3798 9132a9521488f34ce1cdbe3d829201e4 481 SUPERFAMILY SSF111283 18 480 1.06E-130 T 22-04-2016 YE3798 9132a9521488f34ce1cdbe3d829201e4 481 PANTHER PTHR30624 12 481 8.6E-261 T 22-04-2016 YE3798 9132a9521488f34ce1cdbe3d829201e4 481 Pfam PF01523 Putative modulator of DNA gyrase 35 332 4.6E-63 T 22-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- YE3798 9132a9521488f34ce1cdbe3d829201e4 481 PANTHER PTHR30624:SF4 12 481 8.6E-261 T 22-04-2016 YE3916 d252f117c8daca16b432349f8e30f5bd 136 Gene3D G3DSA:3.90.1170.10 22 133 1.5E-53 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 YE3916 d252f117c8daca16b432349f8e30f5bd 136 SUPERFAMILY SSF54686 3 133 4.84E-55 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 YE3916 d252f117c8daca16b432349f8e30f5bd 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 1.0E-40 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 YE3916 d252f117c8daca16b432349f8e30f5bd 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 1.0E-40 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 YE3916 d252f117c8daca16b432349f8e30f5bd 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 1.0E-40 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 YE3916 d252f117c8daca16b432349f8e30f5bd 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 1.0E-40 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 YE3916 d252f117c8daca16b432349f8e30f5bd 136 PANTHER PTHR12220 1 136 2.2E-76 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 YE3916 d252f117c8daca16b432349f8e30f5bd 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 2.4E-47 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 YE3916 d252f117c8daca16b432349f8e30f5bd 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 4.3E-60 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 YE3916 d252f117c8daca16b432349f8e30f5bd 136 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 81 92 - T 22-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3916 d252f117c8daca16b432349f8e30f5bd 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 22-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3916 d252f117c8daca16b432349f8e30f5bd 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 37.821 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 YE3362 677c7351331ec088883527d97451e6ff 414 Pfam PF00990 Diguanylate cyclase, GGDEF domain 258 410 7.7E-46 T 22-04-2016 IPR000160 GGDEF domain YE3362 677c7351331ec088883527d97451e6ff 414 SMART SM00091 133 202 2.9E-5 T 22-04-2016 IPR000014 PAS domain YE3362 677c7351331ec088883527d97451e6ff 414 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 130 253 8.2E-16 T 22-04-2016 IPR000014 PAS domain YE3362 677c7351331ec088883527d97451e6ff 414 SUPERFAMILY SSF55785 153 254 9.83E-17 T 22-04-2016 IPR000014 PAS domain YE3362 677c7351331ec088883527d97451e6ff 414 Pfam PF08448 PAS fold 152 248 9.2E-9 T 22-04-2016 IPR013656 PAS fold-4 YE3362 677c7351331ec088883527d97451e6ff 414 SUPERFAMILY SSF55073 262 412 6.67E-47 T 22-04-2016 IPR029787 Nucleotide cyclase YE3362 677c7351331ec088883527d97451e6ff 414 PANTHER PTHR10799:SF750 291 411 2.1E-36 T 22-04-2016 YE3362 677c7351331ec088883527d97451e6ff 414 SMART SM00267 246 414 1.8E-58 T 22-04-2016 IPR000160 GGDEF domain YE3362 677c7351331ec088883527d97451e6ff 414 Gene3D G3DSA:3.30.70.270 260 412 3.5E-50 T 22-04-2016 YE3362 677c7351331ec088883527d97451e6ff 414 PANTHER PTHR10799 291 411 2.1E-36 T 22-04-2016 YE3362 677c7351331ec088883527d97451e6ff 414 Gene3D G3DSA:3.30.450.20 124 244 2.8E-15 T 22-04-2016 YE3362 677c7351331ec088883527d97451e6ff 414 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 253 412 4.7E-47 T 22-04-2016 IPR000160 GGDEF domain YE2188 308f403fb4c638cff6ba2042aca3f161 554 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 11 239 3.1E-40 T 22-04-2016 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 YE2188 308f403fb4c638cff6ba2042aca3f161 554 PANTHER PTHR33908:SF3 9 544 3.3E-161 T 22-04-2016 YE2188 308f403fb4c638cff6ba2042aca3f161 554 Hamap MF_01165 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase [arnT]. 3 553 43.299 T 22-04-2016 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase GO:0016763 UniPathway: UPA00037 YE2188 308f403fb4c638cff6ba2042aca3f161 554 PANTHER PTHR33908 9 544 3.3E-161 T 22-04-2016 YE1254 f7864f72a1621c83434fa922194866a8 192 SUPERFAMILY SSF101874 23 191 9.94E-56 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like YE1254 f7864f72a1621c83434fa922194866a8 192 Hamap MF_00780 Protein YceI [yceI]. 2 192 44.787 T 22-04-2016 IPR023480 Uncharacterised protein family UPF0312/YceI YE1254 f7864f72a1621c83434fa922194866a8 192 PANTHER PTHR34406 1 191 1.4E-61 T 22-04-2016 YE1254 f7864f72a1621c83434fa922194866a8 192 PANTHER PTHR34406:SF1 1 191 1.4E-61 T 22-04-2016 YE1254 f7864f72a1621c83434fa922194866a8 192 Gene3D G3DSA:2.40.128.110 23 190 1.4E-59 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like YE1254 f7864f72a1621c83434fa922194866a8 192 SMART SM00867 25 189 3.1E-70 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like YE1254 f7864f72a1621c83434fa922194866a8 192 Pfam PF04264 YceI-like domain 26 187 1.4E-40 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like YE0583 e6c5f75cbf882a71b15beca58dd2cdaf 376 PANTHER PTHR13504:SF33 1 376 3.8E-189 T 22-04-2016 YE0583 e6c5f75cbf882a71b15beca58dd2cdaf 376 SUPERFAMILY SSF46785 302 371 3.16E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0583 e6c5f75cbf882a71b15beca58dd2cdaf 376 Gene3D G3DSA:1.10.10.10 302 364 8.6E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0583 e6c5f75cbf882a71b15beca58dd2cdaf 376 Pfam PF02661 Fic/DOC family 117 227 5.3E-18 T 22-04-2016 IPR003812 Fido domain YE0583 e6c5f75cbf882a71b15beca58dd2cdaf 376 SUPERFAMILY SSF140931 104 298 1.31E-38 T 22-04-2016 IPR003812 Fido domain YE0583 e6c5f75cbf882a71b15beca58dd2cdaf 376 Gene3D G3DSA:1.10.3290.10 33 301 1.4E-56 T 22-04-2016 IPR003812 Fido domain YE0583 e6c5f75cbf882a71b15beca58dd2cdaf 376 PANTHER PTHR13504 1 376 3.8E-189 T 22-04-2016 YE0583 e6c5f75cbf882a71b15beca58dd2cdaf 376 Pfam PF13776 Domain of unknown function (DUF4172) 6 87 9.3E-28 T 22-04-2016 IPR025230 Domain of unknown function DUF4172 YE2400 ea94348702c7ea4e5f2044d6505ea6e1 131 PANTHER PTHR35814 1 131 1.1E-75 T 22-04-2016 YE2400 ea94348702c7ea4e5f2044d6505ea6e1 131 SUPERFAMILY SSF161084 4 124 2.22E-30 T 22-04-2016 YE2400 ea94348702c7ea4e5f2044d6505ea6e1 131 Gene3D G3DSA:1.20.120.550 4 122 1.1E-23 T 22-04-2016 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain YE2400 ea94348702c7ea4e5f2044d6505ea6e1 131 Pfam PF01124 MAPEG family 4 120 1.8E-25 T 22-04-2016 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein YE2400 ea94348702c7ea4e5f2044d6505ea6e1 131 PANTHER PTHR35814:SF2 1 131 1.1E-75 T 22-04-2016 YE3836 2b1a1b0a7613309ca602bce259a59e84 257 SUPERFAMILY SSF52540 17 251 1.05E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3836 2b1a1b0a7613309ca602bce259a59e84 257 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE3836 2b1a1b0a7613309ca602bce259a59e84 257 Gene3D G3DSA:3.40.50.300 16 252 5.1E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3836 2b1a1b0a7613309ca602bce259a59e84 257 PANTHER PTHR24220:SF474 19 256 1.7E-170 T 22-04-2016 YE3836 2b1a1b0a7613309ca602bce259a59e84 257 PANTHER PTHR24220 19 256 1.7E-170 T 22-04-2016 YE3836 2b1a1b0a7613309ca602bce259a59e84 257 SMART SM00382 42 229 3.2E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain YE3836 2b1a1b0a7613309ca602bce259a59e84 257 PIRSF PIRSF039085 14 257 3.1E-108 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 YE3836 2b1a1b0a7613309ca602bce259a59e84 257 Pfam PF00005 ABC transporter 33 181 8.5E-38 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE3162 b184b35aab6d24a9c8b7dba5923e40e7 149 PANTHER PTHR30455 2 149 3.9E-74 T 22-04-2016 YE3162 b184b35aab6d24a9c8b7dba5923e40e7 149 PANTHER PTHR30455:SF2 2 149 3.9E-74 T 22-04-2016 YE3162 b184b35aab6d24a9c8b7dba5923e40e7 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 88.974 T 22-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 YE3162 b184b35aab6d24a9c8b7dba5923e40e7 149 Pfam PF03477 ATP cone domain 50 136 7.4E-16 T 22-04-2016 IPR005144 ATP-cone domain YE3162 b184b35aab6d24a9c8b7dba5923e40e7 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 6.5E-76 T 22-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 YE2485 a1a6e31428580bf9319e4cf3d07b021d 405 Pfam PF01321 Creatinase/Prolidase N-terminal domain 15 177 2.2E-26 T 22-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 YE2485 a1a6e31428580bf9319e4cf3d07b021d 405 Gene3D G3DSA:3.40.350.10 14 175 1.5E-13 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal YE2485 a1a6e31428580bf9319e4cf3d07b021d 405 Gene3D G3DSA:3.90.230.10 176 402 5.0E-47 T 22-04-2016 IPR000994 Peptidase M24, structural domain YE2485 a1a6e31428580bf9319e4cf3d07b021d 405 SUPERFAMILY SSF55920 174 403 1.26E-50 T 22-04-2016 IPR000994 Peptidase M24, structural domain YE2485 a1a6e31428580bf9319e4cf3d07b021d 405 Pfam PF00557 Metallopeptidase family M24 185 387 9.1E-36 T 22-04-2016 IPR000994 Peptidase M24, structural domain YE2485 a1a6e31428580bf9319e4cf3d07b021d 405 SUPERFAMILY SSF53092 14 175 4.45E-13 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal YE2485 a1a6e31428580bf9319e4cf3d07b021d 405 PANTHER PTHR10804 93 119 1.3E-48 T 22-04-2016 YE2485 a1a6e31428580bf9319e4cf3d07b021d 405 PANTHER PTHR10804 158 400 1.3E-48 T 22-04-2016 YE2508 a1b0345ec5d55511093408de922a5235 501 Pfam PF00324 Amino acid permease 33 470 1.6E-118 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 YE2508 a1b0345ec5d55511093408de922a5235 501 ProSitePatterns PS00218 Amino acid permeases signature. 58 88 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 YE2508 a1b0345ec5d55511093408de922a5235 501 PANTHER PTHR11785 1 499 0.0 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YE2508 a1b0345ec5d55511093408de922a5235 501 PANTHER PTHR11785:SF25 1 499 0.0 T 22-04-2016 YE2508 a1b0345ec5d55511093408de922a5235 501 PIRSF PIRSF006060 19 489 3.1E-64 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YE0124 f8533c8ee873ab8c55d6872c082eb722 217 Gene3D G3DSA:3.30.1500.10 1 195 3.5E-20 T 22-04-2016 IPR010495 Haem-binding HasA YE0124 f8533c8ee873ab8c55d6872c082eb722 217 SUPERFAMILY SSF54621 2 191 7.45E-12 T 22-04-2016 IPR010495 Haem-binding HasA YE0124 f8533c8ee873ab8c55d6872c082eb722 217 Pfam PF06438 Heme-binding protein A (HasA) 1 217 7.2E-33 T 22-04-2016 IPR010495 Haem-binding HasA YE1981 7b65e3fa40dee2ed70e09cecb6ea3d94 688 Pfam PF02554 Carbon starvation protein CstA 32 408 6.7E-169 T 22-04-2016 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 YE1981 7b65e3fa40dee2ed70e09cecb6ea3d94 688 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 463 591 2.2E-32 T 22-04-2016 IPR025299 CstA, C-terminal domain YE1981 7b65e3fa40dee2ed70e09cecb6ea3d94 688 PANTHER PTHR30252 5 686 0.0 T 22-04-2016 YE1981 7b65e3fa40dee2ed70e09cecb6ea3d94 688 PANTHER PTHR30252:SF2 5 686 0.0 T 22-04-2016 YE2392 642370fbf9139805d1bc61039163ae8b 334 SMART SM00382 54 181 6.4E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain YE2392 642370fbf9139805d1bc61039163ae8b 334 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 256 329 1.1E-33 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 YE2392 642370fbf9139805d1bc61039163ae8b 334 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 27 329 5.5E-149 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 YE2392 642370fbf9139805d1bc61039163ae8b 334 PANTHER PTHR13779 1 334 1.4E-192 T 22-04-2016 YE2392 642370fbf9139805d1bc61039163ae8b 334 Gene3D G3DSA:3.40.50.300 23 178 8.8E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2392 642370fbf9139805d1bc61039163ae8b 334 Gene3D G3DSA:1.10.8.60 186 258 5.9E-32 T 22-04-2016 YE2392 642370fbf9139805d1bc61039163ae8b 334 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 253 334 7.0E-42 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 YE2392 642370fbf9139805d1bc61039163ae8b 334 SUPERFAMILY SSF52540 23 255 7.0E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2392 642370fbf9139805d1bc61039163ae8b 334 Gene3D G3DSA:1.10.10.10 260 330 1.1E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2392 642370fbf9139805d1bc61039163ae8b 334 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 334 185.374 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 YE2392 642370fbf9139805d1bc61039163ae8b 334 PANTHER PTHR13779:SF25 1 334 1.4E-192 T 22-04-2016 YE2392 642370fbf9139805d1bc61039163ae8b 334 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 7 238 2.3E-117 T 22-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 YE2392 642370fbf9139805d1bc61039163ae8b 334 SUPERFAMILY SSF46785 260 331 3.27E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3406 17fc5e1b8c8a40a271fa218d78e9ff91 289 PANTHER PTHR30221 16 284 1.0E-113 T 22-04-2016 YE3406 17fc5e1b8c8a40a271fa218d78e9ff91 289 Gene3D G3DSA:3.30.70.100 182 266 1.3E-28 T 22-04-2016 YE3406 17fc5e1b8c8a40a271fa218d78e9ff91 289 SUPERFAMILY SSF82861 28 112 1.96E-15 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 YE3406 17fc5e1b8c8a40a271fa218d78e9ff91 289 Pfam PF05552 Conserved TM helix 15 64 2.8E-14 T 22-04-2016 IPR008910 Conserved TM helix YE3406 17fc5e1b8c8a40a271fa218d78e9ff91 289 Gene3D G3DSA:2.30.30.60 129 178 5.8E-19 T 22-04-2016 YE3406 17fc5e1b8c8a40a271fa218d78e9ff91 289 SUPERFAMILY SSF82689 181 279 1.19E-30 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 YE3406 17fc5e1b8c8a40a271fa218d78e9ff91 289 Pfam PF00924 Mechanosensitive ion channel 72 268 3.4E-55 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 YE3406 17fc5e1b8c8a40a271fa218d78e9ff91 289 SUPERFAMILY SSF50182 114 179 7.52E-17 T 22-04-2016 IPR010920 LSM domain YE3406 17fc5e1b8c8a40a271fa218d78e9ff91 289 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 143 177 - T 22-04-2016 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 YE3406 17fc5e1b8c8a40a271fa218d78e9ff91 289 PANTHER PTHR30221:SF7 16 284 1.0E-113 T 22-04-2016 YE2684 ee4659c4b9c027f6c283ed5229ad3cc8 904 Gene3D G3DSA:2.40.50.230 387 469 1.5E-37 T 22-04-2016 IPR006531 Gp5 N-terminal YE2684 ee4659c4b9c027f6c283ed5229ad3cc8 904 PANTHER PTHR32305:SF9 4 674 0.0 T 22-04-2016 YE2684 ee4659c4b9c027f6c283ed5229ad3cc8 904 Pfam PF05954 Phage late control gene D protein (GPD) 29 347 2.0E-87 T 22-04-2016 YE2684 ee4659c4b9c027f6c283ed5229ad3cc8 904 SUPERFAMILY SSF69279 17 203 6.8E-50 T 22-04-2016 YE2684 ee4659c4b9c027f6c283ed5229ad3cc8 904 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 17 538 4.1E-154 T 22-04-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YE2684 ee4659c4b9c027f6c283ed5229ad3cc8 904 Gene3D G3DSA:3.55.50.10 117 208 5.4E-32 T 22-04-2016 YE2684 ee4659c4b9c027f6c283ed5229ad3cc8 904 SUPERFAMILY SSF69349 459 671 2.82E-42 T 22-04-2016 YE2684 ee4659c4b9c027f6c283ed5229ad3cc8 904 PANTHER PTHR32305 4 674 0.0 T 22-04-2016 YE2684 ee4659c4b9c027f6c283ed5229ad3cc8 904 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 23 521 6.7E-118 T 22-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YE2684 ee4659c4b9c027f6c283ed5229ad3cc8 904 SUPERFAMILY SSF69279 210 381 5.1E-36 T 22-04-2016 YE2684 ee4659c4b9c027f6c283ed5229ad3cc8 904 SUPERFAMILY SSF69255 381 469 8.11E-32 T 22-04-2016 YE1577 1b15be45ac118b7b7f77170756da836c 180 SUPERFAMILY SSF46785 6 143 2.48E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1577 1b15be45ac118b7b7f77170756da836c 180 PANTHER PTHR33204 1 160 4.1E-58 T 22-04-2016 YE1577 1b15be45ac118b7b7f77170756da836c 180 Pfam PF01638 HxlR-like helix-turn-helix 20 105 1.4E-20 T 22-04-2016 IPR002577 Helix-turn-helix, HxlR type YE1577 1b15be45ac118b7b7f77170756da836c 180 Gene3D G3DSA:1.10.10.10 1 105 8.1E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1577 1b15be45ac118b7b7f77170756da836c 180 PANTHER PTHR33204:SF10 1 160 4.1E-58 T 22-04-2016 YE3264 8047ddb4139a655f8f67a77cde3460fe 104 Pfam PF00034 Cytochrome c 32 103 1.6E-8 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 YE3264 8047ddb4139a655f8f67a77cde3460fe 104 PRINTS PR00605 Class IC cytochrome C signature 77 99 3.1E-5 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 YE3264 8047ddb4139a655f8f67a77cde3460fe 104 PRINTS PR00605 Class IC cytochrome C signature 32 43 3.1E-5 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 YE3264 8047ddb4139a655f8f67a77cde3460fe 104 SUPERFAMILY SSF46626 6 103 6.77E-22 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 YE3264 8047ddb4139a655f8f67a77cde3460fe 104 Gene3D G3DSA:1.10.760.10 20 103 2.9E-27 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 YE3264 8047ddb4139a655f8f67a77cde3460fe 104 PANTHER PTHR33751 1 104 1.0E-30 T 22-04-2016 YE3264 8047ddb4139a655f8f67a77cde3460fe 104 PANTHER PTHR33751:SF3 1 104 1.0E-30 T 22-04-2016 YE3093 c0854f4506709e2bf60c2f3e66959112 656 Gene3D G3DSA:1.20.272.10 243 362 6.1E-49 T 22-04-2016 YE3093 c0854f4506709e2bf60c2f3e66959112 656 PANTHER PTHR11669:SF0 1 398 1.5E-184 T 22-04-2016 YE3093 c0854f4506709e2bf60c2f3e66959112 656 Gene3D G3DSA:3.40.50.300 15 166 7.9E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3093 c0854f4506709e2bf60c2f3e66959112 656 Pfam PF12168 DNA polymerase III subunits tau domain IV DnaB-binding 429 510 1.9E-22 T 22-04-2016 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE3093 c0854f4506709e2bf60c2f3e66959112 656 PANTHER PTHR11669 1 398 1.5E-184 T 22-04-2016 YE3093 c0854f4506709e2bf60c2f3e66959112 656 SMART SM00382 37 179 1.6E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain YE3093 c0854f4506709e2bf60c2f3e66959112 656 SUPERFAMILY SSF52540 35 221 4.18E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3093 c0854f4506709e2bf60c2f3e66959112 656 Gene3D G3DSA:1.10.8.60 167 242 7.3E-32 T 22-04-2016 YE3093 c0854f4506709e2bf60c2f3e66959112 656 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 356 7.0E-134 T 22-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 YE3093 c0854f4506709e2bf60c2f3e66959112 656 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 363 3.9E-32 T 22-04-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 YE3093 c0854f4506709e2bf60c2f3e66959112 656 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 512 653 1.1E-58 T 22-04-2016 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE3093 c0854f4506709e2bf60c2f3e66959112 656 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 1.9E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YE3093 c0854f4506709e2bf60c2f3e66959112 656 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 1.9E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YE3093 c0854f4506709e2bf60c2f3e66959112 656 SUPERFAMILY SSF48019 243 367 1.87E-35 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 YE3093 c0854f4506709e2bf60c2f3e66959112 656 Pfam PF13177 DNA polymerase III, delta subunit 20 177 7.9E-42 T 22-04-2016 YE1748 9df30786e215fbebeb49f918a4111b3d 572 PANTHER PTHR24221:SF240 1 570 7.6E-253 T 22-04-2016 YE1748 9df30786e215fbebeb49f918a4111b3d 572 PANTHER PTHR24221 1 570 7.6E-253 T 22-04-2016 YE1748 9df30786e215fbebeb49f918a4111b3d 572 Gene3D G3DSA:1.20.1560.10 3 315 8.6E-68 T 22-04-2016 YE1748 9df30786e215fbebeb49f918a4111b3d 572 Gene3D G3DSA:3.40.50.300 333 563 5.3E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1748 9df30786e215fbebeb49f918a4111b3d 572 Pfam PF00664 ABC transporter transmembrane region 20 287 3.1E-50 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YE1748 9df30786e215fbebeb49f918a4111b3d 572 Pfam PF00005 ABC transporter 351 498 4.0E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE1748 9df30786e215fbebeb49f918a4111b3d 572 SUPERFAMILY SSF90123 3 321 2.88E-73 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YE1748 9df30786e215fbebeb49f918a4111b3d 572 SUPERFAMILY SSF52540 322 569 3.11E-91 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1748 9df30786e215fbebeb49f918a4111b3d 572 ProSitePatterns PS00211 ABC transporters family signature. 470 484 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE1748 9df30786e215fbebeb49f918a4111b3d 572 SMART SM00382 358 544 4.3E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain YE1105 ac34b74357dca86b95cdb169cf3dffd6 458 SMART SM00388 234 298 1.1E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE1105 ac34b74357dca86b95cdb169cf3dffd6 458 Gene3D G3DSA:3.30.565.10 305 453 2.0E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE1105 ac34b74357dca86b95cdb169cf3dffd6 458 Gene3D G3DSA:1.10.287.130 226 293 6.7E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE1105 ac34b74357dca86b95cdb169cf3dffd6 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 394 3.0E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE1105 ac34b74357dca86b95cdb169cf3dffd6 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 408 3.0E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE1105 ac34b74357dca86b95cdb169cf3dffd6 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 433 3.0E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE1105 ac34b74357dca86b95cdb169cf3dffd6 458 SUPERFAMILY SSF158472 182 230 2.88E-10 T 22-04-2016 YE1105 ac34b74357dca86b95cdb169cf3dffd6 458 Pfam PF00512 His Kinase A (phospho-acceptor) domain 234 297 8.5E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE1105 ac34b74357dca86b95cdb169cf3dffd6 458 SUPERFAMILY SSF47384 217 298 4.9E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE1105 ac34b74357dca86b95cdb169cf3dffd6 458 SMART SM00387 343 455 2.6E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE1105 ac34b74357dca86b95cdb169cf3dffd6 458 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 343 453 6.1E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE1105 ac34b74357dca86b95cdb169cf3dffd6 458 PANTHER PTHR24423 1 7 2.8E-146 T 22-04-2016 YE1105 ac34b74357dca86b95cdb169cf3dffd6 458 PANTHER PTHR24423 175 453 2.8E-146 T 22-04-2016 YE1105 ac34b74357dca86b95cdb169cf3dffd6 458 SUPERFAMILY SSF55874 287 453 7.33E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE1105 ac34b74357dca86b95cdb169cf3dffd6 458 SMART SM00304 181 233 2.7E-14 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YE1105 ac34b74357dca86b95cdb169cf3dffd6 458 PANTHER PTHR24423:SF531 1 7 2.8E-146 T 22-04-2016 YE1105 ac34b74357dca86b95cdb169cf3dffd6 458 PANTHER PTHR24423:SF531 175 453 2.8E-146 T 22-04-2016 YE1105 ac34b74357dca86b95cdb169cf3dffd6 458 Pfam PF00672 HAMP domain 162 229 6.1E-17 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YE3838 75a325c238af96eed4e03e25291807e2 308 Gene3D G3DSA:3.40.190.10 176 261 6.9E-23 T 22-04-2016 YE3838 75a325c238af96eed4e03e25291807e2 308 PANTHER PTHR30419 1 291 1.2E-125 T 22-04-2016 YE3838 75a325c238af96eed4e03e25291807e2 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 4.9E-22 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE3838 75a325c238af96eed4e03e25291807e2 308 Pfam PF03466 LysR substrate binding domain 89 289 2.6E-42 T 22-04-2016 IPR005119 LysR, substrate-binding YE3838 75a325c238af96eed4e03e25291807e2 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.8E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE3838 75a325c238af96eed4e03e25291807e2 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.8E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE3838 75a325c238af96eed4e03e25291807e2 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.8E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE3838 75a325c238af96eed4e03e25291807e2 308 Gene3D G3DSA:3.40.190.10 90 175 4.3E-12 T 22-04-2016 YE3838 75a325c238af96eed4e03e25291807e2 308 SUPERFAMILY SSF53850 90 292 8.01E-41 T 22-04-2016 YE3838 75a325c238af96eed4e03e25291807e2 308 PANTHER PTHR30419:SF8 1 291 1.2E-125 T 22-04-2016 YE3838 75a325c238af96eed4e03e25291807e2 308 SUPERFAMILY SSF46785 1 86 2.82E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3838 75a325c238af96eed4e03e25291807e2 308 Gene3D G3DSA:1.10.10.10 1 85 3.2E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE4057 df2f08168a8af655911fd81aa5a37751 450 Gene3D G3DSA:3.50.50.60 3 138 1.8E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE4057 df2f08168a8af655911fd81aa5a37751 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 4.8E-29 T 22-04-2016 YE4057 df2f08168a8af655911fd81aa5a37751 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 4.8E-29 T 22-04-2016 YE4057 df2f08168a8af655911fd81aa5a37751 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 4.8E-29 T 22-04-2016 YE4057 df2f08168a8af655911fd81aa5a37751 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 4.8E-29 T 22-04-2016 YE4057 df2f08168a8af655911fd81aa5a37751 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 4.8E-29 T 22-04-2016 YE4057 df2f08168a8af655911fd81aa5a37751 450 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 339 449 1.7E-34 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 YE4057 df2f08168a8af655911fd81aa5a37751 450 SUPERFAMILY SSF55424 336 450 9.11E-36 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 YE4057 df2f08168a8af655911fd81aa5a37751 450 PIRSF PIRSF000350 1 447 3.5E-87 T 22-04-2016 YE4057 df2f08168a8af655911fd81aa5a37751 450 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 YE4057 df2f08168a8af655911fd81aa5a37751 450 Gene3D G3DSA:3.30.390.30 338 450 1.8E-44 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 YE4057 df2f08168a8af655911fd81aa5a37751 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 1.7E-66 T 22-04-2016 YE4057 df2f08168a8af655911fd81aa5a37751 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 1.7E-66 T 22-04-2016 YE4057 df2f08168a8af655911fd81aa5a37751 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 1.7E-66 T 22-04-2016 YE4057 df2f08168a8af655911fd81aa5a37751 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 1.7E-66 T 22-04-2016 YE4057 df2f08168a8af655911fd81aa5a37751 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 402 417 1.7E-66 T 22-04-2016 YE4057 df2f08168a8af655911fd81aa5a37751 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 424 444 1.7E-66 T 22-04-2016 YE4057 df2f08168a8af655911fd81aa5a37751 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 335 356 1.7E-66 T 22-04-2016 YE4057 df2f08168a8af655911fd81aa5a37751 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 1.7E-66 T 22-04-2016 YE4057 df2f08168a8af655911fd81aa5a37751 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.7E-66 T 22-04-2016 YE4057 df2f08168a8af655911fd81aa5a37751 450 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 3 450 1.7E-219 T 22-04-2016 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081 YE4057 df2f08168a8af655911fd81aa5a37751 450 PANTHER PTHR22912:SF106 1 450 3.2E-258 T 22-04-2016 YE4057 df2f08168a8af655911fd81aa5a37751 450 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 318 9.2E-70 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE4057 df2f08168a8af655911fd81aa5a37751 450 PANTHER PTHR22912 1 450 3.2E-258 T 22-04-2016 YE4057 df2f08168a8af655911fd81aa5a37751 450 Gene3D G3DSA:3.50.50.60 139 326 1.7E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE4057 df2f08168a8af655911fd81aa5a37751 450 SUPERFAMILY SSF51905 1 364 5.18E-60 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE0300 8d65bf34bbfb1d8cb96c87277f5d9842 91 Pfam PF00216 Bacterial DNA-binding protein 1 90 8.6E-33 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YE0300 8d65bf34bbfb1d8cb96c87277f5d9842 91 Gene3D G3DSA:4.10.520.10 1 90 2.9E-37 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 YE0300 8d65bf34bbfb1d8cb96c87277f5d9842 91 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 2.0E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YE0300 8d65bf34bbfb1d8cb96c87277f5d9842 91 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 2.0E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YE0300 8d65bf34bbfb1d8cb96c87277f5d9842 91 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 2.0E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YE0300 8d65bf34bbfb1d8cb96c87277f5d9842 91 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 YE0300 8d65bf34bbfb1d8cb96c87277f5d9842 91 SMART SM00411 1 90 7.6E-44 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YE0300 8d65bf34bbfb1d8cb96c87277f5d9842 91 PANTHER PTHR33175:SF4 1 90 1.2E-59 T 22-04-2016 YE0300 8d65bf34bbfb1d8cb96c87277f5d9842 91 PANTHER PTHR33175 1 90 1.2E-59 T 22-04-2016 YE0300 8d65bf34bbfb1d8cb96c87277f5d9842 91 SUPERFAMILY SSF47729 1 90 5.0E-33 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 YE2006 95e39ce33f36c8177abd9847aeb88bc3 310 PANTHER PTHR11019 1 290 1.4E-146 T 22-04-2016 YE2006 95e39ce33f36c8177abd9847aeb88bc3 310 PANTHER PTHR11019:SF123 1 290 1.4E-146 T 22-04-2016 YE2006 95e39ce33f36c8177abd9847aeb88bc3 310 Gene3D G3DSA:2.60.120.280 13 173 7.5E-39 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 YE2006 95e39ce33f36c8177abd9847aeb88bc3 310 SUPERFAMILY SSF51215 12 168 4.45E-29 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 YE2006 95e39ce33f36c8177abd9847aeb88bc3 310 Gene3D G3DSA:1.10.10.60 178 235 3.7E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE2006 95e39ce33f36c8177abd9847aeb88bc3 310 Pfam PF02311 AraC-like ligand binding domain 27 162 4.0E-22 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 YE2006 95e39ce33f36c8177abd9847aeb88bc3 310 Pfam PF12833 Helix-turn-helix domain 205 284 7.2E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YE2006 95e39ce33f36c8177abd9847aeb88bc3 310 SUPERFAMILY SSF46689 182 232 7.79E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE2006 95e39ce33f36c8177abd9847aeb88bc3 310 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 236 278 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 YE2006 95e39ce33f36c8177abd9847aeb88bc3 310 Gene3D G3DSA:1.10.10.60 236 285 1.3E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE2006 95e39ce33f36c8177abd9847aeb88bc3 310 SUPERFAMILY SSF46689 236 286 1.61E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE2006 95e39ce33f36c8177abd9847aeb88bc3 310 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 266 282 5.7E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YE2006 95e39ce33f36c8177abd9847aeb88bc3 310 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 251 266 5.7E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YE2006 95e39ce33f36c8177abd9847aeb88bc3 310 SMART SM00342 199 282 5.0E-31 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YE3416 d2333f7a25da7f7d58f9d5f37ac46eea 664 TIGRFAM TIGR00232 tktlase_bact: transketolase 5 663 0.0 T 22-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 YE3416 d2333f7a25da7f7d58f9d5f37ac46eea 664 PANTHER PTHR11624 334 663 0.0 T 22-04-2016 IPR033247 Transketolase family YE3416 d2333f7a25da7f7d58f9d5f37ac46eea 664 PANTHER PTHR11624 1 310 0.0 T 22-04-2016 IPR033247 Transketolase family YE3416 d2333f7a25da7f7d58f9d5f37ac46eea 664 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 334 4.1E-170 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 YE3416 d2333f7a25da7f7d58f9d5f37ac46eea 664 PANTHER PTHR11624:SF85 334 663 0.0 T 22-04-2016 YE3416 d2333f7a25da7f7d58f9d5f37ac46eea 664 PANTHER PTHR11624:SF85 1 310 0.0 T 22-04-2016 YE3416 d2333f7a25da7f7d58f9d5f37ac46eea 664 Gene3D G3DSA:3.40.50.970 4 322 5.7E-135 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE3416 d2333f7a25da7f7d58f9d5f37ac46eea 664 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 22-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 YE3416 d2333f7a25da7f7d58f9d5f37ac46eea 664 Pfam PF02780 Transketolase, C-terminal domain 545 655 2.2E-18 T 22-04-2016 IPR033248 Transketolase, C-terminal domain YE3416 d2333f7a25da7f7d58f9d5f37ac46eea 664 Gene3D G3DSA:3.40.50.970 328 533 1.1E-82 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE3416 d2333f7a25da7f7d58f9d5f37ac46eea 664 SUPERFAMILY SSF52922 533 664 4.71E-44 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 YE3416 d2333f7a25da7f7d58f9d5f37ac46eea 664 SMART SM00861 355 525 2.6E-69 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain YE3416 d2333f7a25da7f7d58f9d5f37ac46eea 664 SUPERFAMILY SSF52518 333 526 1.35E-69 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE3416 d2333f7a25da7f7d58f9d5f37ac46eea 664 SUPERFAMILY SSF52518 5 330 6.96E-121 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE3416 d2333f7a25da7f7d58f9d5f37ac46eea 664 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 2.5E-47 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain YE3416 d2333f7a25da7f7d58f9d5f37ac46eea 664 Gene3D G3DSA:3.40.50.920 538 663 1.8E-51 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 YE3416 d2333f7a25da7f7d58f9d5f37ac46eea 664 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 YE2567 31e625367a8f6e98db238bea7c6a41d9 383 SUPERFAMILY SSF160544 244 351 1.31E-40 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal YE2567 31e625367a8f6e98db238bea7c6a41d9 383 PANTHER PTHR30531 3 361 2.8E-157 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YE2567 31e625367a8f6e98db238bea7c6a41d9 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 5.0E-42 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YE2567 31e625367a8f6e98db238bea7c6a41d9 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 5.0E-42 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YE2567 31e625367a8f6e98db238bea7c6a41d9 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 5.0E-42 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YE2567 31e625367a8f6e98db238bea7c6a41d9 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 5.0E-42 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YE2567 31e625367a8f6e98db238bea7c6a41d9 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 5.0E-42 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YE2567 31e625367a8f6e98db238bea7c6a41d9 383 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 347 2.4E-125 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 YE2567 31e625367a8f6e98db238bea7c6a41d9 383 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 8 353 1.6E-132 T 22-04-2016 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 YE2567 31e625367a8f6e98db238bea7c6a41d9 383 Gene3D G3DSA:3.40.1690.10 218 357 1.3E-64 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal YE2567 31e625367a8f6e98db238bea7c6a41d9 383 PANTHER PTHR30531:SF0 3 361 2.8E-157 T 22-04-2016 YE4018 c9403c4da87a0acb9c995e1640832d96 367 Gene3D G3DSA:3.40.50.720 1 142 2.7E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain YE4018 c9403c4da87a0acb9c995e1640832d96 367 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 121 3.0E-23 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 YE4018 c9403c4da87a0acb9c995e1640832d96 367 SUPERFAMILY SSF55347 134 354 8.42E-79 T 22-04-2016 YE4018 c9403c4da87a0acb9c995e1640832d96 367 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 367 33.96 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 YE4018 c9403c4da87a0acb9c995e1640832d96 367 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 261 275 - T 22-04-2016 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 YE4018 c9403c4da87a0acb9c995e1640832d96 367 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 144 353 5.7E-58 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YE4018 c9403c4da87a0acb9c995e1640832d96 367 SUPERFAMILY SSF51735 1 147 1.15E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain YE4018 c9403c4da87a0acb9c995e1640832d96 367 PANTHER PTHR10174:SF116 201 367 1.8E-159 T 22-04-2016 YE4018 c9403c4da87a0acb9c995e1640832d96 367 PANTHER PTHR10174:SF116 103 179 1.8E-159 T 22-04-2016 YE4018 c9403c4da87a0acb9c995e1640832d96 367 PIRSF PIRSF000148 1 367 3.6E-68 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 YE4018 c9403c4da87a0acb9c995e1640832d96 367 Gene3D G3DSA:3.30.360.10 143 350 1.8E-76 T 22-04-2016 YE4018 c9403c4da87a0acb9c995e1640832d96 367 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 2 367 4.8E-214 T 22-04-2016 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 YE4018 c9403c4da87a0acb9c995e1640832d96 367 SMART SM00859 3 122 3.5E-24 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 YE4018 c9403c4da87a0acb9c995e1640832d96 367 PANTHER PTHR10174 201 367 1.8E-159 T 22-04-2016 YE4018 c9403c4da87a0acb9c995e1640832d96 367 PANTHER PTHR10174 103 179 1.8E-159 T 22-04-2016 YE0998 26b922b923800385c38ffd98c4de044c 559 Pfam PF02463 RecF/RecN/SMC N terminal domain 7 518 2.8E-19 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal YE0998 26b922b923800385c38ffd98c4de044c 559 PIRSF PIRSF003128 7 559 1.3E-157 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 YE0998 26b922b923800385c38ffd98c4de044c 559 Gene3D G3DSA:3.40.50.300 376 401 1.7E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0998 26b922b923800385c38ffd98c4de044c 559 Gene3D G3DSA:3.40.50.300 437 502 1.7E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0998 26b922b923800385c38ffd98c4de044c 559 TIGRFAM TIGR00634 recN: DNA repair protein RecN 7 558 3.3E-168 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 YE0998 26b922b923800385c38ffd98c4de044c 559 SUPERFAMILY SSF52540 293 345 2.78E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0998 26b922b923800385c38ffd98c4de044c 559 SUPERFAMILY SSF52540 7 205 2.78E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0998 26b922b923800385c38ffd98c4de044c 559 SUPERFAMILY SSF52540 374 520 2.78E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0998 26b922b923800385c38ffd98c4de044c 559 PANTHER PTHR11059 8 559 1.3E-182 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 YE0998 26b922b923800385c38ffd98c4de044c 559 Gene3D G3DSA:3.40.50.300 7 212 3.0E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1894A d80b5b98fc6f5e476123e6b39d93838f 331 PANTHER PTHR23408 5 315 3.9E-151 T 22-04-2016 YE1894A d80b5b98fc6f5e476123e6b39d93838f 331 Gene3D G3DSA:1.10.287.130 263 331 9.1E-33 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE1894A d80b5b98fc6f5e476123e6b39d93838f 331 Pfam PF03308 ArgK protein 22 291 9.5E-109 T 22-04-2016 YE1894A d80b5b98fc6f5e476123e6b39d93838f 331 SUPERFAMILY SSF52540 6 316 5.41E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1894A d80b5b98fc6f5e476123e6b39d93838f 331 Gene3D G3DSA:1.20.5.170 6 54 2.7E-17 T 22-04-2016 YE1894A d80b5b98fc6f5e476123e6b39d93838f 331 PANTHER PTHR23408:SF17 5 315 3.9E-151 T 22-04-2016 YE1894A d80b5b98fc6f5e476123e6b39d93838f 331 Gene3D G3DSA:3.40.50.300 55 257 9.5E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1894A d80b5b98fc6f5e476123e6b39d93838f 331 TIGRFAM TIGR00750 lao: LAO/AO transport system ATPase 17 321 4.3E-117 T 22-04-2016 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB GO:0003924|GO:0005525 YE3852 e471ad2d6d0b74ae985b71c28ee9b1ec 342 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 102 120 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 YE3852 e471ad2d6d0b74ae985b71c28ee9b1ec 342 Gene3D G3DSA:3.20.20.70 21 261 4.7E-74 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YE3852 e471ad2d6d0b74ae985b71c28ee9b1ec 342 PANTHER PTHR11082:SF29 16 335 7.5E-159 T 22-04-2016 YE3852 e471ad2d6d0b74ae985b71c28ee9b1ec 342 SUPERFAMILY SSF51395 21 328 1.14E-71 T 22-04-2016 YE3852 e471ad2d6d0b74ae985b71c28ee9b1ec 342 PIRSF PIRSF006621 10 335 4.4E-70 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 YE3852 e471ad2d6d0b74ae985b71c28ee9b1ec 342 PANTHER PTHR11082 16 335 7.5E-159 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 YE3852 e471ad2d6d0b74ae985b71c28ee9b1ec 342 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 15 337 52.407 T 22-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 YE3852 e471ad2d6d0b74ae985b71c28ee9b1ec 342 Pfam PF01207 Dihydrouridine synthase (Dus) 24 324 2.8E-93 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 YE3852 e471ad2d6d0b74ae985b71c28ee9b1ec 342 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 21 335 1.6E-160 T 22-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 YE3866 e38ecbf20a41cd031805763dc7590de1 403 PANTHER PTHR30061 12 401 5.6E-138 T 22-04-2016 YE3866 e38ecbf20a41cd031805763dc7590de1 403 PANTHER PTHR30061:SF21 12 401 5.6E-138 T 22-04-2016 YE3866 e38ecbf20a41cd031805763dc7590de1 403 Gene3D G3DSA:3.40.190.10 39 159 2.7E-31 T 22-04-2016 YE3866 e38ecbf20a41cd031805763dc7590de1 403 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 140 157 - T 22-04-2016 IPR006061 Solute-binding family 1, conserved site GO:0005215|GO:0006810 YE3866 e38ecbf20a41cd031805763dc7590de1 403 Gene3D G3DSA:3.40.190.10 160 329 5.1E-55 T 22-04-2016 YE3866 e38ecbf20a41cd031805763dc7590de1 403 Pfam PF13416 Bacterial extracellular solute-binding protein 57 350 9.8E-41 T 22-04-2016 YE3866 e38ecbf20a41cd031805763dc7590de1 403 SUPERFAMILY SSF53850 36 401 2.32E-92 T 22-04-2016 YE3866 e38ecbf20a41cd031805763dc7590de1 403 PRINTS PR00181 Maltose binding protein signature 43 61 9.0E-90 T 22-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 YE3866 e38ecbf20a41cd031805763dc7590de1 403 PRINTS PR00181 Maltose binding protein signature 306 327 9.0E-90 T 22-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 YE3866 e38ecbf20a41cd031805763dc7590de1 403 PRINTS PR00181 Maltose binding protein signature 137 156 9.0E-90 T 22-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 YE3866 e38ecbf20a41cd031805763dc7590de1 403 PRINTS PR00181 Maltose binding protein signature 364 383 9.0E-90 T 22-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 YE3866 e38ecbf20a41cd031805763dc7590de1 403 PRINTS PR00181 Maltose binding protein signature 240 259 9.0E-90 T 22-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 YE3866 e38ecbf20a41cd031805763dc7590de1 403 PRINTS PR00181 Maltose binding protein signature 178 197 9.0E-90 T 22-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 YE3866 e38ecbf20a41cd031805763dc7590de1 403 PRINTS PR00181 Maltose binding protein signature 158 177 9.0E-90 T 22-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 YE3866 e38ecbf20a41cd031805763dc7590de1 403 PRINTS PR00181 Maltose binding protein signature 77 95 9.0E-90 T 22-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 YE0151 6a33d2c54e119e847ae41dbf246c6f27 616 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YE0151 6a33d2c54e119e847ae41dbf246c6f27 616 Pfam PF00920 Dehydratase family 34 607 3.2E-214 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YE0151 6a33d2c54e119e847ae41dbf246c6f27 616 SUPERFAMILY SSF143975 3 420 4.71E-132 T 22-04-2016 YE0151 6a33d2c54e119e847ae41dbf246c6f27 616 SUPERFAMILY SSF52016 421 610 4.0E-59 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YE0151 6a33d2c54e119e847ae41dbf246c6f27 616 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YE0151 6a33d2c54e119e847ae41dbf246c6f27 616 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 610 44.942 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YE0151 6a33d2c54e119e847ae41dbf246c6f27 616 PANTHER PTHR21000 1 371 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YE0151 6a33d2c54e119e847ae41dbf246c6f27 616 PANTHER PTHR21000 406 616 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YE0151 6a33d2c54e119e847ae41dbf246c6f27 616 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 610 5.0E-261 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YE0151 6a33d2c54e119e847ae41dbf246c6f27 616 PANTHER PTHR21000:SF11 1 371 0.0 T 22-04-2016 YE0151 6a33d2c54e119e847ae41dbf246c6f27 616 PANTHER PTHR21000:SF11 406 616 0.0 T 22-04-2016 YE3100 cb257a2cf726220ec0c5d03bdba22cea 395 Pfam PF00529 HlyD membrane-fusion protein of T1SS 42 361 7.1E-13 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 YE3100 cb257a2cf726220ec0c5d03bdba22cea 395 PANTHER PTHR30158 10 375 1.2E-204 T 22-04-2016 YE3100 cb257a2cf726220ec0c5d03bdba22cea 395 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 377 2.6E-78 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 YE3100 cb257a2cf726220ec0c5d03bdba22cea 395 SUPERFAMILY SSF111369 53 301 3.14E-88 T 22-04-2016 YE3100 cb257a2cf726220ec0c5d03bdba22cea 395 Gene3D G3DSA:2.40.50.100 66 99 9.4E-24 T 22-04-2016 YE3100 cb257a2cf726220ec0c5d03bdba22cea 395 Gene3D G3DSA:2.40.50.100 174 209 9.4E-24 T 22-04-2016 YE3100 cb257a2cf726220ec0c5d03bdba22cea 395 PANTHER PTHR30158:SF4 10 375 1.2E-204 T 22-04-2016 YE3100 cb257a2cf726220ec0c5d03bdba22cea 395 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 64 294 7.5E-11 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YE2366 aa6c487dc131f752d618c5354b548f26 218 PANTHER PTHR11820 16 210 2.8E-82 T 22-04-2016 YE2366 aa6c487dc131f752d618c5354b548f26 218 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 18 205 2.3E-53 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 YE2366 aa6c487dc131f752d618c5354b548f26 218 SUPERFAMILY SSF56529 11 211 1.57E-67 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 YE2366 aa6c487dc131f752d618c5354b548f26 218 Gene3D G3DSA:3.90.850.10 13 217 1.5E-75 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 YE2366 aa6c487dc131f752d618c5354b548f26 218 PANTHER PTHR11820:SF7 16 210 2.8E-82 T 22-04-2016 YE0746 28c6954e5e6794152db59426c56d3418 545 Pfam PF06418 CTP synthase N-terminus 5 266 6.7E-126 T 22-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 YE0746 28c6954e5e6794152db59426c56d3418 545 SUPERFAMILY SSF52540 3 269 4.91E-122 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0746 28c6954e5e6794152db59426c56d3418 545 PANTHER PTHR11550 1 545 0.0 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 YE0746 28c6954e5e6794152db59426c56d3418 545 Hamap MF_01227 CTP synthase [pyrG]. 3 540 51.231 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 YE0746 28c6954e5e6794152db59426c56d3418 545 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 1.3E-263 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 YE0746 28c6954e5e6794152db59426c56d3418 545 Gene3D G3DSA:3.40.50.880 289 541 2.7E-99 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YE0746 28c6954e5e6794152db59426c56d3418 545 SUPERFAMILY SSF52317 289 541 1.3E-88 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YE0746 28c6954e5e6794152db59426c56d3418 545 Pfam PF00117 Glutamine amidotransferase class-I 301 535 7.9E-64 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 YE0746 28c6954e5e6794152db59426c56d3418 545 Gene3D G3DSA:3.40.50.300 1 280 6.8E-134 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0701 8884cc56011048058e08d148ad2063e1 625 Pfam PF02817 e3 binding domain 321 356 5.0E-15 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 YE0701 8884cc56011048058e08d148ad2063e1 625 Gene3D G3DSA:4.10.320.10 314 361 5.1E-22 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 YE0701 8884cc56011048058e08d148ad2063e1 625 SUPERFAMILY SSF47005 315 360 2.49E-13 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 YE0701 8884cc56011048058e08d148ad2063e1 625 PANTHER PTHR23151 21 219 5.3E-264 T 22-04-2016 YE0701 8884cc56011048058e08d148ad2063e1 625 PANTHER PTHR23151 318 625 5.3E-264 T 22-04-2016 YE0701 8884cc56011048058e08d148ad2063e1 625 Gene3D G3DSA:2.40.50.100 1 94 3.0E-22 T 22-04-2016 YE0701 8884cc56011048058e08d148ad2063e1 625 Gene3D G3DSA:2.40.50.100 202 295 7.0E-22 T 22-04-2016 YE0701 8884cc56011048058e08d148ad2063e1 625 Pfam PF00364 Biotin-requiring enzyme 205 274 1.5E-21 T 22-04-2016 IPR000089 Biotin/lipoyl attachment YE0701 8884cc56011048058e08d148ad2063e1 625 Pfam PF00364 Biotin-requiring enzyme 106 175 4.6E-22 T 22-04-2016 IPR000089 Biotin/lipoyl attachment YE0701 8884cc56011048058e08d148ad2063e1 625 Pfam PF00364 Biotin-requiring enzyme 4 73 1.5E-21 T 22-04-2016 IPR000089 Biotin/lipoyl attachment YE0701 8884cc56011048058e08d148ad2063e1 625 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 394 624 7.4E-79 T 22-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 YE0701 8884cc56011048058e08d148ad2063e1 625 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 185 625 8.9E-226 T 22-04-2016 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 YE0701 8884cc56011048058e08d148ad2063e1 625 SUPERFAMILY SSF51230 104 196 5.76E-23 T 22-04-2016 IPR011053 Single hybrid motif YE0701 8884cc56011048058e08d148ad2063e1 625 SUPERFAMILY SSF52777 383 624 8.9E-80 T 22-04-2016 YE0701 8884cc56011048058e08d148ad2063e1 625 SUPERFAMILY SSF51230 204 295 3.53E-23 T 22-04-2016 IPR011053 Single hybrid motif YE0701 8884cc56011048058e08d148ad2063e1 625 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 226 255 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site YE0701 8884cc56011048058e08d148ad2063e1 625 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site YE0701 8884cc56011048058e08d148ad2063e1 625 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 127 156 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site YE0701 8884cc56011048058e08d148ad2063e1 625 Gene3D G3DSA:3.30.559.10 384 625 8.9E-83 T 22-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain YE0701 8884cc56011048058e08d148ad2063e1 625 PANTHER PTHR23151:SF68 21 219 5.3E-264 T 22-04-2016 YE0701 8884cc56011048058e08d148ad2063e1 625 PANTHER PTHR23151:SF68 318 625 5.3E-264 T 22-04-2016 YE0701 8884cc56011048058e08d148ad2063e1 625 SUPERFAMILY SSF51230 1 94 1.57E-23 T 22-04-2016 IPR011053 Single hybrid motif YE0701 8884cc56011048058e08d148ad2063e1 625 Gene3D G3DSA:2.40.50.100 106 180 1.8E-21 T 22-04-2016 YE0755 e8813faf573008541640dca1ff842c5c 601 PRINTS PR00369 Flavodoxin signature 113 124 4.0E-13 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 YE0755 e8813faf573008541640dca1ff842c5c 601 PRINTS PR00369 Flavodoxin signature 145 155 4.0E-13 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 YE0755 e8813faf573008541640dca1ff842c5c 601 PRINTS PR00369 Flavodoxin signature 169 188 4.0E-13 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 YE0755 e8813faf573008541640dca1ff842c5c 601 PRINTS PR00369 Flavodoxin signature 65 78 4.0E-13 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 YE0755 e8813faf573008541640dca1ff842c5c 601 Gene3D G3DSA:2.40.30.10 231 282 4.6E-40 T 22-04-2016 YE0755 e8813faf573008541640dca1ff842c5c 601 Gene3D G3DSA:2.40.30.10 386 456 4.6E-40 T 22-04-2016 YE0755 e8813faf573008541640dca1ff842c5c 601 SUPERFAMILY SSF52218 63 209 4.19E-43 T 22-04-2016 IPR029039 Flavoprotein-like domain YE0755 e8813faf573008541640dca1ff842c5c 601 Pfam PF00667 FAD binding domain 232 426 2.1E-30 T 22-04-2016 IPR003097 FAD-binding, type 1 GO:0016491|GO:0055114 YE0755 e8813faf573008541640dca1ff842c5c 601 SUPERFAMILY SSF52343 446 601 1.13E-50 T 22-04-2016 YE0755 e8813faf573008541640dca1ff842c5c 601 Gene3D G3DSA:1.20.990.10 283 385 8.7E-39 T 22-04-2016 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3 GO:0016491|GO:0055114 YE0755 e8813faf573008541640dca1ff842c5c 601 PANTHER PTHR19384 62 601 8.3E-225 T 22-04-2016 YE0755 e8813faf573008541640dca1ff842c5c 601 Gene3D G3DSA:3.40.50.360 60 210 3.7E-47 T 22-04-2016 IPR029039 Flavoprotein-like domain YE0755 e8813faf573008541640dca1ff842c5c 601 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 272 282 8.8E-29 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YE0755 e8813faf573008541640dca1ff842c5c 601 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 527 543 8.8E-29 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YE0755 e8813faf573008541640dca1ff842c5c 601 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 550 558 8.8E-29 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YE0755 e8813faf573008541640dca1ff842c5c 601 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 496 507 8.8E-29 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YE0755 e8813faf573008541640dca1ff842c5c 601 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 483 492 8.8E-29 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YE0755 e8813faf573008541640dca1ff842c5c 601 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 458 477 8.8E-29 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YE0755 e8813faf573008541640dca1ff842c5c 601 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 388 395 8.8E-29 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YE0755 e8813faf573008541640dca1ff842c5c 601 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 421 430 8.8E-29 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YE0755 e8813faf573008541640dca1ff842c5c 601 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 10 601 1.2E-273 T 22-04-2016 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YE0755 e8813faf573008541640dca1ff842c5c 601 Pfam PF00258 Flavodoxin 67 197 1.8E-31 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 YE0755 e8813faf573008541640dca1ff842c5c 601 SUPERFAMILY SSF63380 230 448 1.07E-64 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 YE0755 e8813faf573008541640dca1ff842c5c 601 PANTHER PTHR19384:SF76 62 601 8.3E-225 T 22-04-2016 YE0755 e8813faf573008541640dca1ff842c5c 601 PIRSF PIRSF000207 1 601 1.3E-277 T 22-04-2016 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YE0755 e8813faf573008541640dca1ff842c5c 601 Hamap MF_01541 Sulfite reductase [NADPH] flavoprotein alpha-component [cysJ]. 2 601 51.963 T 22-04-2016 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YE0755 e8813faf573008541640dca1ff842c5c 601 Pfam PF00175 Oxidoreductase NAD-binding domain 459 565 1.4E-20 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 YE0755 e8813faf573008541640dca1ff842c5c 601 Gene3D G3DSA:3.40.50.80 457 600 5.1E-57 T 22-04-2016 YE0616 06f61d81d707c1eca0fec2ed2251cd77 938 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 843 3.0E-297 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 YE0616 06f61d81d707c1eca0fec2ed2251cd77 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 526 539 4.8E-32 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 YE0616 06f61d81d707c1eca0fec2ed2251cd77 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 401 416 4.8E-32 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 YE0616 06f61d81d707c1eca0fec2ed2251cd77 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 4.8E-32 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 YE0616 06f61d81d707c1eca0fec2ed2251cd77 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 238 261 4.8E-32 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 YE0616 06f61d81d707c1eca0fec2ed2251cd77 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 561 570 4.8E-32 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 YE0616 06f61d81d707c1eca0fec2ed2251cd77 938 Gene3D G3DSA:3.90.740.10 206 389 2.6E-56 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 YE0616 06f61d81d707c1eca0fec2ed2251cd77 938 Gene3D G3DSA:3.40.50.620 17 205 9.2E-133 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YE0616 06f61d81d707c1eca0fec2ed2251cd77 938 Gene3D G3DSA:3.40.50.620 403 637 9.2E-133 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YE0616 06f61d81d707c1eca0fec2ed2251cd77 938 SUPERFAMILY SSF47323 652 929 1.16E-78 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YE0616 06f61d81d707c1eca0fec2ed2251cd77 938 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 641 1.4E-230 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YE0616 06f61d81d707c1eca0fec2ed2251cd77 938 PANTHER PTHR11946:SF11 282 935 0.0 T 22-04-2016 YE0616 06f61d81d707c1eca0fec2ed2251cd77 938 PANTHER PTHR11946:SF11 6 259 0.0 T 22-04-2016 YE0616 06f61d81d707c1eca0fec2ed2251cd77 938 SUPERFAMILY SSF52374 403 647 1.64E-135 T 22-04-2016 YE0616 06f61d81d707c1eca0fec2ed2251cd77 938 SUPERFAMILY SSF52374 3 202 1.64E-135 T 22-04-2016 YE0616 06f61d81d707c1eca0fec2ed2251cd77 938 Pfam PF08264 Anticodon-binding domain of tRNA 685 840 3.4E-30 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 YE0616 06f61d81d707c1eca0fec2ed2251cd77 938 PANTHER PTHR11946 282 935 0.0 T 22-04-2016 YE0616 06f61d81d707c1eca0fec2ed2251cd77 938 PANTHER PTHR11946 6 259 0.0 T 22-04-2016 YE0616 06f61d81d707c1eca0fec2ed2251cd77 938 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 929 21.361 T 22-04-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5 YE0616 06f61d81d707c1eca0fec2ed2251cd77 938 Gene3D G3DSA:1.10.730.10 642 789 3.1E-44 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YE0616 06f61d81d707c1eca0fec2ed2251cd77 938 SUPERFAMILY SSF50677 204 403 5.49E-56 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 YE0616 06f61d81d707c1eca0fec2ed2251cd77 938 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YE0616 06f61d81d707c1eca0fec2ed2251cd77 938 Pfam PF06827 Zinc finger found in FPG and IleRS 898 926 1.1E-9 T 22-04-2016 IPR010663 Zinc finger, FPG/IleRS-type YE2662 585923ec95ada167affd350ab80967f4 210 Gene3D G3DSA:1.10.10.10 156 209 2.1E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2662 585923ec95ada167affd350ab80967f4 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE2662 585923ec95ada167affd350ab80967f4 210 Gene3D G3DSA:3.40.50.2300 3 155 6.0E-32 T 22-04-2016 YE2662 585923ec95ada167affd350ab80967f4 210 PANTHER PTHR26402 3 201 1.2E-77 T 22-04-2016 YE2662 585923ec95ada167affd350ab80967f4 210 Pfam PF00072 Response regulator receiver domain 5 113 1.2E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE2662 585923ec95ada167affd350ab80967f4 210 SMART SM00448 3 116 6.4E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE2662 585923ec95ada167affd350ab80967f4 210 PANTHER PTHR26402:SF405 3 201 1.2E-77 T 22-04-2016 YE2662 585923ec95ada167affd350ab80967f4 210 SUPERFAMILY SSF46894 141 210 1.36E-20 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YE2662 585923ec95ada167affd350ab80967f4 210 SUPERFAMILY SSF52172 2 131 9.96E-31 T 22-04-2016 IPR011006 CheY-like superfamily YE2662 585923ec95ada167affd350ab80967f4 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 5.2E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE2662 585923ec95ada167affd350ab80967f4 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 5.2E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE2662 585923ec95ada167affd350ab80967f4 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 5.2E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE2662 585923ec95ada167affd350ab80967f4 210 SMART SM00421 147 204 7.7E-25 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE2662 585923ec95ada167affd350ab80967f4 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 204 3.8E-22 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE1507 f4e2b9e480d39534f5fbaa2ebdba3db0 573 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 417 436 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 YE1507 f4e2b9e480d39534f5fbaa2ebdba3db0 573 Gene3D G3DSA:3.40.50.970 1 174 9.8E-53 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE1507 f4e2b9e480d39534f5fbaa2ebdba3db0 573 Gene3D G3DSA:3.40.50.1220 188 341 9.4E-43 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain YE1507 f4e2b9e480d39534f5fbaa2ebdba3db0 573 PANTHER PTHR18968 1 573 0.0 T 22-04-2016 YE1507 f4e2b9e480d39534f5fbaa2ebdba3db0 573 SUPERFAMILY SSF52467 183 350 3.74E-43 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain YE1507 f4e2b9e480d39534f5fbaa2ebdba3db0 573 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 171 5.4E-43 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 YE1507 f4e2b9e480d39534f5fbaa2ebdba3db0 573 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 380 526 4.3E-41 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 YE1507 f4e2b9e480d39534f5fbaa2ebdba3db0 573 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 194 319 8.5E-31 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 YE1507 f4e2b9e480d39534f5fbaa2ebdba3db0 573 SUPERFAMILY SSF52518 357 558 1.73E-62 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE1507 f4e2b9e480d39534f5fbaa2ebdba3db0 573 PANTHER PTHR18968:SF12 1 573 0.0 T 22-04-2016 YE1507 f4e2b9e480d39534f5fbaa2ebdba3db0 573 Gene3D G3DSA:3.40.50.970 353 552 1.0E-63 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE1507 f4e2b9e480d39534f5fbaa2ebdba3db0 573 SUPERFAMILY SSF52518 2 179 7.16E-45 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE1504 4a5d53f298acb97cd137b82bec4a1c79 485 Gene3D G3DSA:3.40.50.720 1 222 2.0E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain YE1504 4a5d53f298acb97cd137b82bec4a1c79 485 Pfam PF11066 Protein of unknown function (DUF2867) 335 464 1.0E-12 T 22-04-2016 IPR021295 Protein of unknown function DUF2867 YE1504 4a5d53f298acb97cd137b82bec4a1c79 485 Pfam PF13460 NAD(P)H-binding 10 122 3.2E-12 T 22-04-2016 IPR016040 NAD(P)-binding domain YE1504 4a5d53f298acb97cd137b82bec4a1c79 485 SUPERFAMILY SSF51735 1 296 6.18E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain YE1504 4a5d53f298acb97cd137b82bec4a1c79 485 PANTHER PTHR10366 260 319 7.6E-185 T 22-04-2016 YE1504 4a5d53f298acb97cd137b82bec4a1c79 485 PANTHER PTHR10366 5 239 7.6E-185 T 22-04-2016 YE1504 4a5d53f298acb97cd137b82bec4a1c79 485 PANTHER PTHR10366:SF439 260 319 7.6E-185 T 22-04-2016 YE1504 4a5d53f298acb97cd137b82bec4a1c79 485 PANTHER PTHR10366:SF439 5 239 7.6E-185 T 22-04-2016 YE1211 ea2e29c064f89fc67f6f1dfad8fc3889 672 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 331 346 - T 22-04-2016 IPR033136 NAD-dependent DNA ligase, conserved site YE1211 ea2e29c064f89fc67f6f1dfad8fc3889 672 SMART SM00292 594 671 8.1E-15 T 22-04-2016 IPR001357 BRCT domain YE1211 ea2e29c064f89fc67f6f1dfad8fc3889 672 PIRSF PIRSF001604 1 672 2.4E-259 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 YE1211 ea2e29c064f89fc67f6f1dfad8fc3889 672 SUPERFAMILY SSF47781 404 578 2.78E-61 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 YE1211 ea2e29c064f89fc67f6f1dfad8fc3889 672 Gene3D G3DSA:1.10.287.610 2 67 1.7E-29 T 22-04-2016 YE1211 ea2e29c064f89fc67f6f1dfad8fc3889 672 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 322 398 1.9E-36 T 22-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 YE1211 ea2e29c064f89fc67f6f1dfad8fc3889 672 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 595 667 7.8E-12 T 22-04-2016 IPR001357 BRCT domain YE1211 ea2e29c064f89fc67f6f1dfad8fc3889 672 Gene3D G3DSA:1.10.150.20 435 502 4.5E-27 T 22-04-2016 YE1211 ea2e29c064f89fc67f6f1dfad8fc3889 672 SUPERFAMILY SSF52113 595 668 8.41E-19 T 22-04-2016 IPR001357 BRCT domain YE1211 ea2e29c064f89fc67f6f1dfad8fc3889 672 SUPERFAMILY SSF50249 318 400 2.23E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE1211 ea2e29c064f89fc67f6f1dfad8fc3889 672 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 4 318 6.4E-137 T 22-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 YE1211 ea2e29c064f89fc67f6f1dfad8fc3889 672 Gene3D G3DSA:1.10.150.20 504 580 1.2E-29 T 22-04-2016 YE1211 ea2e29c064f89fc67f6f1dfad8fc3889 672 Pfam PF12826 Helix-hairpin-helix motif 510 573 4.0E-23 T 22-04-2016 YE1211 ea2e29c064f89fc67f6f1dfad8fc3889 672 PANTHER PTHR23389 1 531 2.7E-219 T 22-04-2016 YE1211 ea2e29c064f89fc67f6f1dfad8fc3889 672 SUPERFAMILY SSF56091 2 316 6.3E-124 T 22-04-2016 YE1211 ea2e29c064f89fc67f6f1dfad8fc3889 672 Hamap MF_01588 DNA ligase [ligA]. 2 668 54.76 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 YE1211 ea2e29c064f89fc67f6f1dfad8fc3889 672 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 115 144 - T 22-04-2016 IPR018239 NAD-dependent DNA ligase, active site YE1211 ea2e29c064f89fc67f6f1dfad8fc3889 672 SMART SM00278 512 531 200.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 YE1211 ea2e29c064f89fc67f6f1dfad8fc3889 672 SMART SM00278 544 563 29.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 YE1211 ea2e29c064f89fc67f6f1dfad8fc3889 672 SMART SM00278 480 499 3.5 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 YE1211 ea2e29c064f89fc67f6f1dfad8fc3889 672 SMART SM00278 446 465 17.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 YE1211 ea2e29c064f89fc67f6f1dfad8fc3889 672 Gene3D G3DSA:2.40.50.140 319 391 4.4E-35 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE1211 ea2e29c064f89fc67f6f1dfad8fc3889 672 PANTHER PTHR23389:SF9 1 531 2.7E-219 T 22-04-2016 YE1211 ea2e29c064f89fc67f6f1dfad8fc3889 672 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 407 434 2.5E-11 T 22-04-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 YE1211 ea2e29c064f89fc67f6f1dfad8fc3889 672 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 11 664 2.1E-270 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 YE1211 ea2e29c064f89fc67f6f1dfad8fc3889 672 Gene3D G3DSA:3.30.470.30 119 252 8.4E-52 T 22-04-2016 YE1211 ea2e29c064f89fc67f6f1dfad8fc3889 672 Gene3D G3DSA:3.40.50.10190 593 670 1.0E-25 T 22-04-2016 IPR001357 BRCT domain YE1211 ea2e29c064f89fc67f6f1dfad8fc3889 672 Pfam PF14520 Helix-hairpin-helix domain 446 502 5.2E-6 T 22-04-2016 YE1211 ea2e29c064f89fc67f6f1dfad8fc3889 672 SMART SM00532 3 448 1.2E-285 T 22-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 YE0227 5a44f2b3c3458359bea9aed42ab69bbc 286 Pfam PF02687 FtsX-like permease family 162 276 1.5E-12 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 YE0227 5a44f2b3c3458359bea9aed42ab69bbc 286 TIGRFAM TIGR00439 ftsX: putative protein insertion permease FtsX 3 285 7.8E-129 T 22-04-2016 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 YE0227 5a44f2b3c3458359bea9aed42ab69bbc 286 PANTHER PTHR30489 1 285 2.2E-58 T 22-04-2016 YE0227 5a44f2b3c3458359bea9aed42ab69bbc 286 PIRSF PIRSF003097 1 282 3.1E-93 T 22-04-2016 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 YE1030 f8719723b4a7b78c4dc15ced4be7c15f 161 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 46 83 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 YE1030 f8719723b4a7b78c4dc15ced4be7c15f 161 Pfam PF14437 MafB19-like deaminase 1 140 9.2E-29 T 22-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 YE1030 f8719723b4a7b78c4dc15ced4be7c15f 161 Gene3D G3DSA:3.40.140.10 1 139 4.2E-54 T 22-04-2016 YE1030 f8719723b4a7b78c4dc15ced4be7c15f 161 SUPERFAMILY SSF53927 1 146 1.07E-52 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 YE1030 f8719723b4a7b78c4dc15ced4be7c15f 161 PANTHER PTHR11079 1 144 1.0E-45 T 22-04-2016 YE1030 f8719723b4a7b78c4dc15ced4be7c15f 161 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 1 142 47.418 T 22-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 YE0430 a8beeb36e8971e30b90b492aa7302a52 446 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YE0430 a8beeb36e8971e30b90b492aa7302a52 446 SUPERFAMILY SSF53738 258 365 5.49E-31 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YE0430 a8beeb36e8971e30b90b492aa7302a52 446 Gene3D G3DSA:3.40.120.10 176 250 6.7E-28 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YE0430 a8beeb36e8971e30b90b492aa7302a52 446 Gene3D G3DSA:3.30.310.50 360 443 2.5E-16 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YE0430 a8beeb36e8971e30b90b492aa7302a52 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 5.7E-15 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YE0430 a8beeb36e8971e30b90b492aa7302a52 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 5.7E-15 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YE0430 a8beeb36e8971e30b90b492aa7302a52 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 5.7E-15 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YE0430 a8beeb36e8971e30b90b492aa7302a52 446 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 3 445 47.604 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YE0430 a8beeb36e8971e30b90b492aa7302a52 446 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 254 1.0E-20 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YE0430 a8beeb36e8971e30b90b492aa7302a52 446 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 4 135 5.0E-45 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YE0430 a8beeb36e8971e30b90b492aa7302a52 446 PANTHER PTHR22573 1 444 3.0E-188 T 22-04-2016 YE0430 a8beeb36e8971e30b90b492aa7302a52 446 SUPERFAMILY SSF53738 2 181 4.32E-49 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YE0430 a8beeb36e8971e30b90b492aa7302a52 446 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 442 5.2E-13 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YE0430 a8beeb36e8971e30b90b492aa7302a52 446 SUPERFAMILY SSF53738 156 256 1.73E-30 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YE0430 a8beeb36e8971e30b90b492aa7302a52 446 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 364 4.1E-32 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YE0430 a8beeb36e8971e30b90b492aa7302a52 446 Gene3D G3DSA:3.40.120.10 4 151 1.1E-46 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YE0430 a8beeb36e8971e30b90b492aa7302a52 446 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 7 443 2.6E-194 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YE0430 a8beeb36e8971e30b90b492aa7302a52 446 Gene3D G3DSA:3.40.120.10 251 359 2.5E-32 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YE0430 a8beeb36e8971e30b90b492aa7302a52 446 SUPERFAMILY SSF55957 357 444 8.89E-21 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YE0430 a8beeb36e8971e30b90b492aa7302a52 446 PANTHER PTHR22573:SF15 1 444 3.0E-188 T 22-04-2016 YE3383 eb4a589bc13eb5cda463b985746d292f 475 SUPERFAMILY SSF47384 254 319 1.16E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE3383 eb4a589bc13eb5cda463b985746d292f 475 Pfam PF00512 His Kinase A (phospho-acceptor) domain 258 319 1.4E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE3383 eb4a589bc13eb5cda463b985746d292f 475 PANTHER PTHR24423 5 13 2.3E-66 T 22-04-2016 YE3383 eb4a589bc13eb5cda463b985746d292f 475 PANTHER PTHR24423 75 133 2.3E-66 T 22-04-2016 YE3383 eb4a589bc13eb5cda463b985746d292f 475 PANTHER PTHR24423 198 474 2.3E-66 T 22-04-2016 YE3383 eb4a589bc13eb5cda463b985746d292f 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 452 2.4E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE3383 eb4a589bc13eb5cda463b985746d292f 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 429 2.4E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE3383 eb4a589bc13eb5cda463b985746d292f 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 415 2.4E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE3383 eb4a589bc13eb5cda463b985746d292f 475 Gene3D G3DSA:3.30.565.10 321 473 2.1E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE3383 eb4a589bc13eb5cda463b985746d292f 475 SMART SM00387 364 474 1.4E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE3383 eb4a589bc13eb5cda463b985746d292f 475 SUPERFAMILY SSF55874 311 472 9.43E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE3383 eb4a589bc13eb5cda463b985746d292f 475 Gene3D G3DSA:3.30.450.20 91 169 3.0E-4 T 22-04-2016 YE3383 eb4a589bc13eb5cda463b985746d292f 475 SUPERFAMILY SSF103190 53 170 1.49E-13 T 22-04-2016 IPR029151 Periplasmic sensor domain-like YE3383 eb4a589bc13eb5cda463b985746d292f 475 SMART SM00388 255 320 1.3E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE3383 eb4a589bc13eb5cda463b985746d292f 475 Pfam PF14827 Double sensory domain of two-component sensor kinase 66 168 2.8E-6 T 22-04-2016 IPR029150 Double Cache domain 3 YE3383 eb4a589bc13eb5cda463b985746d292f 475 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 365 473 1.5E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE3383 eb4a589bc13eb5cda463b985746d292f 475 Gene3D G3DSA:1.10.287.130 258 313 1.0E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE3383 eb4a589bc13eb5cda463b985746d292f 475 Pfam PF00672 HAMP domain 185 250 3.1E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YE1979 e7b55535f2b4fd7897cee86fa67323b2 221 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 214 1.2E-79 T 22-04-2016 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 YE1979 e7b55535f2b4fd7897cee86fa67323b2 221 SUPERFAMILY SSF51569 1 216 6.8E-62 T 22-04-2016 YE1979 e7b55535f2b4fd7897cee86fa67323b2 221 Gene3D G3DSA:3.20.20.70 1 213 9.0E-60 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YE1979 e7b55535f2b4fd7897cee86fa67323b2 221 Pfam PF00923 Transaldolase 3 206 3.6E-42 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 YE1979 e7b55535f2b4fd7897cee86fa67323b2 221 PANTHER PTHR10683 1 216 6.9E-142 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 YE1979 e7b55535f2b4fd7897cee86fa67323b2 221 PANTHER PTHR10683:SF15 1 216 6.9E-142 T 22-04-2016 YE1979 e7b55535f2b4fd7897cee86fa67323b2 221 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 YE1979 e7b55535f2b4fd7897cee86fa67323b2 221 ProSitePatterns PS00958 Transaldolase active site. 82 99 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 YE3446 d86a6f5e12f806f78cf36c4fdf1f00ee 249 PANTHER PTHR30269 2 247 1.6E-31 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 YE3446 d86a6f5e12f806f78cf36c4fdf1f00ee 249 Pfam PF01925 Sulfite exporter TauE/SafE 15 240 2.4E-32 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 YE3446 d86a6f5e12f806f78cf36c4fdf1f00ee 249 PANTHER PTHR30269:SF14 2 247 1.6E-31 T 22-04-2016 YE3241 8654c76504e9745555fecc749af7f8b7 488 PANTHER PTHR30203 8 476 8.4E-106 T 22-04-2016 YE3241 8654c76504e9745555fecc749af7f8b7 488 PANTHER PTHR30203:SF6 8 476 8.4E-106 T 22-04-2016 YE3241 8654c76504e9745555fecc749af7f8b7 488 Gene3D G3DSA:2.20.200.10 320 359 9.6E-18 T 22-04-2016 YE3241 8654c76504e9745555fecc749af7f8b7 488 Gene3D G3DSA:2.20.200.10 101 146 9.6E-18 T 22-04-2016 YE3241 8654c76504e9745555fecc749af7f8b7 488 Gene3D G3DSA:1.20.1600.10 147 319 8.8E-73 T 22-04-2016 YE3241 8654c76504e9745555fecc749af7f8b7 488 Gene3D G3DSA:1.20.1600.10 52 90 8.8E-73 T 22-04-2016 YE3241 8654c76504e9745555fecc749af7f8b7 488 Gene3D G3DSA:1.20.1600.10 361 474 8.8E-73 T 22-04-2016 YE3241 8654c76504e9745555fecc749af7f8b7 488 Pfam PF02321 Outer membrane efflux protein 292 472 5.2E-15 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 YE3241 8654c76504e9745555fecc749af7f8b7 488 Pfam PF02321 Outer membrane efflux protein 64 259 9.4E-24 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 YE3241 8654c76504e9745555fecc749af7f8b7 488 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 13 474 1.6E-100 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 YE3241 8654c76504e9745555fecc749af7f8b7 488 SUPERFAMILY SSF56954 5 476 2.88E-87 T 22-04-2016 YE3734 83c9cf9d1134cb781d430e496c77dc5f 300 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 6 295 1.0E-132 T 22-04-2016 IPR005911 Protein YhcC-like GO:0051536 YE3734 83c9cf9d1134cb781d430e496c77dc5f 300 PANTHER PTHR11135 1 290 8.0E-150 T 22-04-2016 YE3734 83c9cf9d1134cb781d430e496c77dc5f 300 Pfam PF16199 Radical_SAM C-terminal domain 208 283 8.3E-18 T 22-04-2016 IPR032432 Radical SAM, C-terminal extension YE3734 83c9cf9d1134cb781d430e496c77dc5f 300 Pfam PF04055 Radical SAM superfamily 43 202 1.9E-17 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 YE3734 83c9cf9d1134cb781d430e496c77dc5f 300 SMART SM00729 23 247 2.5E-42 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 YE3734 83c9cf9d1134cb781d430e496c77dc5f 300 PANTHER PTHR11135:SF1 1 290 8.0E-150 T 22-04-2016 IPR005911 Protein YhcC-like GO:0051536 YE3734 83c9cf9d1134cb781d430e496c77dc5f 300 SUPERFAMILY SSF102114 13 267 3.4E-45 T 22-04-2016 YE3734 83c9cf9d1134cb781d430e496c77dc5f 300 Gene3D G3DSA:3.80.30.20 23 251 3.5E-33 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe YE3040 a2a261a4283b3713291b5e7cbe034864 99 Pfam PF01527 Transposase 13 78 1.0E-8 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 YE3040 a2a261a4283b3713291b5e7cbe034864 99 Gene3D G3DSA:1.10.10.60 16 93 4.7E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE3040 a2a261a4283b3713291b5e7cbe034864 99 SUPERFAMILY SSF46689 12 96 1.51E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE3532 b3d0561c5ae60b44f9558d0f5bbe1e6d 487 SUPERFAMILY SSF51338 414 483 3.73E-14 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YE3532 b3d0561c5ae60b44f9558d0f5bbe1e6d 487 SUPERFAMILY SSF51338 68 131 1.66E-9 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YE3532 b3d0561c5ae60b44f9558d0f5bbe1e6d 487 PANTHER PTHR11271 33 478 2.1E-92 T 22-04-2016 YE3532 b3d0561c5ae60b44f9558d0f5bbe1e6d 487 Pfam PF01979 Amidohydrolase family 119 476 5.4E-29 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 YE3532 b3d0561c5ae60b44f9558d0f5bbe1e6d 487 Gene3D G3DSA:3.20.20.140 125 425 9.9E-80 T 22-04-2016 YE3532 b3d0561c5ae60b44f9558d0f5bbe1e6d 487 Gene3D G3DSA:2.30.40.10 438 482 3.0E-25 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YE3532 b3d0561c5ae60b44f9558d0f5bbe1e6d 487 Gene3D G3DSA:2.30.40.10 67 124 3.0E-25 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YE3532 b3d0561c5ae60b44f9558d0f5bbe1e6d 487 SUPERFAMILY SSF51556 123 427 2.58E-76 T 22-04-2016 IPR032466 Metal-dependent hydrolase YE3532 b3d0561c5ae60b44f9558d0f5bbe1e6d 487 PANTHER PTHR11271:SF33 33 478 2.1E-92 T 22-04-2016 YE2639 5ba48583050fcf63fe6f1b1b57c1d654 465 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 6 456 3.7E-100 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 YE2639 5ba48583050fcf63fe6f1b1b57c1d654 465 Gene3D G3DSA:1.20.1250.20 19 211 4.6E-31 T 22-04-2016 YE2639 5ba48583050fcf63fe6f1b1b57c1d654 465 Gene3D G3DSA:1.20.1250.20 265 460 8.6E-18 T 22-04-2016 YE2639 5ba48583050fcf63fe6f1b1b57c1d654 465 PANTHER PTHR23500:SF141 1 460 1.6E-156 T 22-04-2016 YE2639 5ba48583050fcf63fe6f1b1b57c1d654 465 PRINTS PR00171 Sugar transporter signature 362 383 4.4E-20 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 YE2639 5ba48583050fcf63fe6f1b1b57c1d654 465 PRINTS PR00171 Sugar transporter signature 273 283 4.4E-20 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 YE2639 5ba48583050fcf63fe6f1b1b57c1d654 465 PRINTS PR00171 Sugar transporter signature 26 36 4.4E-20 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 YE2639 5ba48583050fcf63fe6f1b1b57c1d654 465 PRINTS PR00171 Sugar transporter signature 385 397 4.4E-20 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 YE2639 5ba48583050fcf63fe6f1b1b57c1d654 465 PRINTS PR00171 Sugar transporter signature 109 128 4.4E-20 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 YE2639 5ba48583050fcf63fe6f1b1b57c1d654 465 PANTHER PTHR23500 1 460 1.6E-156 T 22-04-2016 YE2639 5ba48583050fcf63fe6f1b1b57c1d654 465 SUPERFAMILY SSF103473 11 460 4.19E-76 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE2639 5ba48583050fcf63fe6f1b1b57c1d654 465 ProSitePatterns PS00216 Sugar transport proteins signature 1. 72 89 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 YE2639 5ba48583050fcf63fe6f1b1b57c1d654 465 Pfam PF00083 Sugar (and other) transporter 19 460 4.2E-105 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 YE1215 2d41dd1675d5e4d9e0204fdec67cd016 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 203 4.9E-27 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 YE1215 2d41dd1675d5e4d9e0204fdec67cd016 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 4.9E-27 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 YE1215 2d41dd1675d5e4d9e0204fdec67cd016 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 179 189 4.9E-27 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 YE1215 2d41dd1675d5e4d9e0204fdec67cd016 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 4.9E-27 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 YE1215 2d41dd1675d5e4d9e0204fdec67cd016 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 4.9E-27 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 YE1215 2d41dd1675d5e4d9e0204fdec67cd016 471 SUPERFAMILY SSF52374 3 298 1.66E-113 T 22-04-2016 YE1215 2d41dd1675d5e4d9e0204fdec67cd016 471 Gene3D G3DSA:3.90.800.10 68 180 6.6E-39 T 22-04-2016 YE1215 2d41dd1675d5e4d9e0204fdec67cd016 471 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 2 305 2.3E-116 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 YE1215 2d41dd1675d5e4d9e0204fdec67cd016 471 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 462 1.1E-201 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 YE1215 2d41dd1675d5e4d9e0204fdec67cd016 471 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YE1215 2d41dd1675d5e4d9e0204fdec67cd016 471 PANTHER PTHR11451 2 312 3.6E-101 T 22-04-2016 YE1215 2d41dd1675d5e4d9e0204fdec67cd016 471 Gene3D G3DSA:1.10.10.350 363 462 3.4E-32 T 22-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 YE1215 2d41dd1675d5e4d9e0204fdec67cd016 471 PANTHER PTHR11451:SF41 2 312 3.6E-101 T 22-04-2016 YE1215 2d41dd1675d5e4d9e0204fdec67cd016 471 Gene3D G3DSA:1.10.1160.10 233 314 1.2E-35 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 YE1215 2d41dd1675d5e4d9e0204fdec67cd016 471 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 3 461 34.229 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 YE1215 2d41dd1675d5e4d9e0204fdec67cd016 471 SUPERFAMILY SSF48163 299 461 1.02E-44 T 22-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 YE1215 2d41dd1675d5e4d9e0204fdec67cd016 471 Gene3D G3DSA:3.40.50.620 2 67 1.1E-53 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YE1215 2d41dd1675d5e4d9e0204fdec67cd016 471 Gene3D G3DSA:3.40.50.620 181 230 1.1E-53 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YE0471 8b72e7c196308428baee9961033f33c9 382 Gene3D G3DSA:2.30.40.10 2 91 8.3E-7 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YE0471 8b72e7c196308428baee9961033f33c9 382 PIRSF PIRSF038971 1 382 2.6E-154 T 22-04-2016 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399 YE0471 8b72e7c196308428baee9961033f33c9 382 TIGRFAM TIGR02318 phosphono_phnM: phosphonate metabolism protein PhnM 3 381 2.4E-151 T 22-04-2016 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399 YE0471 8b72e7c196308428baee9961033f33c9 382 SUPERFAMILY SSF51556 50 345 8.32E-20 T 22-04-2016 IPR032466 Metal-dependent hydrolase YE0471 8b72e7c196308428baee9961033f33c9 382 Pfam PF07969 Amidohydrolase family 224 359 1.1E-10 T 22-04-2016 IPR013108 Amidohydrolase 3 YE0471 8b72e7c196308428baee9961033f33c9 382 PANTHER PTHR11271 1 382 1.3E-192 T 22-04-2016 YE0471 8b72e7c196308428baee9961033f33c9 382 PANTHER PTHR11271:SF43 1 382 1.3E-192 T 22-04-2016 YE0471 8b72e7c196308428baee9961033f33c9 382 Gene3D G3DSA:3.20.20.140 288 378 1.1E-9 T 22-04-2016 YE0471 8b72e7c196308428baee9961033f33c9 382 SUPERFAMILY SSF51338 345 381 6.48E-7 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YE0471 8b72e7c196308428baee9961033f33c9 382 SUPERFAMILY SSF51338 2 49 6.48E-7 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YE2458 c3b63702750c391413a144d6fc52559a 190 Gene3D G3DSA:2.60.120.10 10 115 3.1E-38 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YE2458 c3b63702750c391413a144d6fc52559a 190 Pfam PF05962 HutD 13 167 1.9E-54 T 22-04-2016 IPR010282 Uncharacterised protein family HutD/Ves YE2458 c3b63702750c391413a144d6fc52559a 190 PANTHER PTHR37943:SF1 1 190 7.7E-69 T 22-04-2016 YE2458 c3b63702750c391413a144d6fc52559a 190 SUPERFAMILY SSF51182 1 187 6.4E-57 T 22-04-2016 IPR011051 RmlC-like cupin domain YE2458 c3b63702750c391413a144d6fc52559a 190 PANTHER PTHR37943 1 190 7.7E-69 T 22-04-2016 YE0420 cd209ab357d74f10aa56229c452d9133 319 PANTHER PTHR22911 3 319 7.9E-175 T 22-04-2016 YE0420 cd209ab357d74f10aa56229c452d9133 319 PANTHER PTHR22911:SF55 3 319 7.9E-175 T 22-04-2016 YE0420 cd209ab357d74f10aa56229c452d9133 319 Pfam PF00892 EamA-like transporter family 161 270 1.2E-15 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YE0420 cd209ab357d74f10aa56229c452d9133 319 Pfam PF00892 EamA-like transporter family 9 144 1.1E-28 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YE0420 cd209ab357d74f10aa56229c452d9133 319 SUPERFAMILY SSF103481 43 147 2.22E-14 T 22-04-2016 YE0494 392338fde9aba3b4b9d59eaa7cf6ec22 335 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 7 332 2.5E-135 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 YE0494 392338fde9aba3b4b9d59eaa7cf6ec22 335 PRINTS PR00102 Ornithine carbamoyltransferase signature 123 137 8.3E-32 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 YE0494 392338fde9aba3b4b9d59eaa7cf6ec22 335 PRINTS PR00102 Ornithine carbamoyltransferase signature 229 239 8.3E-32 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 YE0494 392338fde9aba3b4b9d59eaa7cf6ec22 335 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 8.3E-32 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 YE0494 392338fde9aba3b4b9d59eaa7cf6ec22 335 PRINTS PR00102 Ornithine carbamoyltransferase signature 50 64 8.3E-32 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 YE0494 392338fde9aba3b4b9d59eaa7cf6ec22 335 PRINTS PR00102 Ornithine carbamoyltransferase signature 83 96 8.3E-32 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 YE0494 392338fde9aba3b4b9d59eaa7cf6ec22 335 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 4.3E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YE0494 392338fde9aba3b4b9d59eaa7cf6ec22 335 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 52 71 4.3E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YE0494 392338fde9aba3b4b9d59eaa7cf6ec22 335 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 134 145 4.3E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YE0494 392338fde9aba3b4b9d59eaa7cf6ec22 335 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 267 276 4.3E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YE0494 392338fde9aba3b4b9d59eaa7cf6ec22 335 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 6 333 84.522 T 22-04-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 YE0494 392338fde9aba3b4b9d59eaa7cf6ec22 335 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 156 330 1.6E-55 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 YE0494 392338fde9aba3b4b9d59eaa7cf6ec22 335 PANTHER PTHR11405 1 276 1.5E-230 T 22-04-2016 YE0494 392338fde9aba3b4b9d59eaa7cf6ec22 335 PANTHER PTHR11405 297 333 1.5E-230 T 22-04-2016 YE0494 392338fde9aba3b4b9d59eaa7cf6ec22 335 SUPERFAMILY SSF53671 2 333 3.54E-99 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YE0494 392338fde9aba3b4b9d59eaa7cf6ec22 335 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 7 147 9.8E-47 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 YE0494 392338fde9aba3b4b9d59eaa7cf6ec22 335 Gene3D G3DSA:3.40.50.1370 144 319 1.4E-73 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YE0494 392338fde9aba3b4b9d59eaa7cf6ec22 335 Gene3D G3DSA:3.40.50.1370 3 143 2.5E-57 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YE0494 392338fde9aba3b4b9d59eaa7cf6ec22 335 PANTHER PTHR11405:SF42 1 276 1.5E-230 T 22-04-2016 YE0494 392338fde9aba3b4b9d59eaa7cf6ec22 335 PANTHER PTHR11405:SF42 297 333 1.5E-230 T 22-04-2016 YE0494 392338fde9aba3b4b9d59eaa7cf6ec22 335 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 52 59 - T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YE0686 dafdd2ff8548a2f9b0cb6c7b16dd2312 347 PIRSF PIRSF000235 1 347 5.6E-200 T 22-04-2016 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: REACT_1698 YE0686 dafdd2ff8548a2f9b0cb6c7b16dd2312 347 PANTHER PTHR11911:SF97 1 163 6.9E-227 T 22-04-2016 YE0686 dafdd2ff8548a2f9b0cb6c7b16dd2312 347 PANTHER PTHR11911:SF97 181 346 6.9E-227 T 22-04-2016 YE0686 dafdd2ff8548a2f9b0cb6c7b16dd2312 347 Hamap MF_00596 GMP reductase [guaC]. 1 345 55.486 T 22-04-2016 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: REACT_1698 YE0686 dafdd2ff8548a2f9b0cb6c7b16dd2312 347 SMART SM01240 7 344 4.8E-141 T 22-04-2016 YE0686 dafdd2ff8548a2f9b0cb6c7b16dd2312 347 PANTHER PTHR11911 1 163 6.9E-227 T 22-04-2016 YE0686 dafdd2ff8548a2f9b0cb6c7b16dd2312 347 PANTHER PTHR11911 181 346 6.9E-227 T 22-04-2016 YE0686 dafdd2ff8548a2f9b0cb6c7b16dd2312 347 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 338 3.2E-79 T 22-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 YE0686 dafdd2ff8548a2f9b0cb6c7b16dd2312 347 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 176 188 - T 22-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 YE0686 dafdd2ff8548a2f9b0cb6c7b16dd2312 347 Gene3D G3DSA:3.20.20.70 2 343 5.2E-109 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YE0686 dafdd2ff8548a2f9b0cb6c7b16dd2312 347 SUPERFAMILY SSF51412 7 335 3.53E-100 T 22-04-2016 YE0686 dafdd2ff8548a2f9b0cb6c7b16dd2312 347 TIGRFAM TIGR01305 GMP_reduct_1: guanosine monophosphate reductase 2 344 2.0E-198 T 22-04-2016 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: REACT_1698 YE0044 4dc49b2e66a19533804a52619d68f445 230 SUPERFAMILY SSF75217 4 183 2.35E-49 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases YE0044 4dc49b2e66a19533804a52619d68f445 230 Pfam PF00588 SpoU rRNA Methylase family 20 159 4.7E-35 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 YE0044 4dc49b2e66a19533804a52619d68f445 230 Gene3D G3DSA:3.40.1280.10 2 176 2.4E-49 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YE0044 4dc49b2e66a19533804a52619d68f445 230 Pfam PF12105 SpoU, rRNA methylase, C-terminal 163 218 1.0E-24 T 22-04-2016 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 YE0044 4dc49b2e66a19533804a52619d68f445 230 PANTHER PTHR12029 1 189 9.0E-76 T 22-04-2016 YE0044 4dc49b2e66a19533804a52619d68f445 230 PANTHER PTHR12029:SF45 1 189 9.0E-76 T 22-04-2016 YE2028 3b5e64bec340c0d90e61e91c47fa936f 251 PANTHER PTHR24322:SF392 7 133 2.4E-86 T 22-04-2016 YE2028 3b5e64bec340c0d90e61e91c47fa936f 251 PANTHER PTHR24322:SF392 149 181 2.4E-86 T 22-04-2016 YE2028 3b5e64bec340c0d90e61e91c47fa936f 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 136 164 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YE2028 3b5e64bec340c0d90e61e91c47fa936f 251 PANTHER PTHR24322 7 133 2.4E-86 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE2028 3b5e64bec340c0d90e61e91c47fa936f 251 PANTHER PTHR24322 149 181 2.4E-86 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE2028 3b5e64bec340c0d90e61e91c47fa936f 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 3.5E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE2028 3b5e64bec340c0d90e61e91c47fa936f 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 3.5E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE2028 3b5e64bec340c0d90e61e91c47fa936f 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 3.5E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE2028 3b5e64bec340c0d90e61e91c47fa936f 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 3.5E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE2028 3b5e64bec340c0d90e61e91c47fa936f 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 3.5E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE2028 3b5e64bec340c0d90e61e91c47fa936f 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.5E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE2028 3b5e64bec340c0d90e61e91c47fa936f 251 Gene3D G3DSA:3.40.50.720 3 234 6.6E-67 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2028 3b5e64bec340c0d90e61e91c47fa936f 251 Pfam PF00106 short chain dehydrogenase 4 189 2.5E-55 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE2028 3b5e64bec340c0d90e61e91c47fa936f 251 SUPERFAMILY SSF51735 4 231 1.3E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2028 3b5e64bec340c0d90e61e91c47fa936f 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 4.6E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE2028 3b5e64bec340c0d90e61e91c47fa936f 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 4.6E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE2028 3b5e64bec340c0d90e61e91c47fa936f 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 4.6E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE3291 e361a48a919aa7aaf16af011517e09fa 110 PANTHER PTHR39586 2 110 2.2E-41 T 22-04-2016 YE3291 e361a48a919aa7aaf16af011517e09fa 110 Gene3D G3DSA:1.20.1440.40 1 106 1.3E-40 T 22-04-2016 IPR023376 YqcC-like domain YE3291 e361a48a919aa7aaf16af011517e09fa 110 SUPERFAMILY SSF158452 1 108 7.19E-39 T 22-04-2016 IPR023376 YqcC-like domain YE3291 e361a48a919aa7aaf16af011517e09fa 110 Pfam PF04287 tRNA pseudouridine synthase C 6 104 4.1E-35 T 22-04-2016 IPR023376 YqcC-like domain YE3291 e361a48a919aa7aaf16af011517e09fa 110 PIRSF PIRSF006257 1 109 2.9E-42 T 22-04-2016 IPR007384 Protein of unknown function UCP006257 YE2557 25dc598f3d7474a26bfddf2cb94d4ad4 419 Pfam PF07559 Flagellar basal body protein FlaE 173 300 3.6E-18 T 22-04-2016 IPR011491 Flagellar hook protein FlgE YE2557 25dc598f3d7474a26bfddf2cb94d4ad4 419 PANTHER PTHR30435 1 117 3.8E-103 T 22-04-2016 YE2557 25dc598f3d7474a26bfddf2cb94d4ad4 419 PANTHER PTHR30435 297 419 3.8E-103 T 22-04-2016 YE2557 25dc598f3d7474a26bfddf2cb94d4ad4 419 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 9 29 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site YE2557 25dc598f3d7474a26bfddf2cb94d4ad4 419 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 341 418 1.2E-22 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YE2557 25dc598f3d7474a26bfddf2cb94d4ad4 419 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 401 1.2E-93 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G YE2557 25dc598f3d7474a26bfddf2cb94d4ad4 419 PANTHER PTHR30435:SF1 1 117 3.8E-103 T 22-04-2016 YE2557 25dc598f3d7474a26bfddf2cb94d4ad4 419 PANTHER PTHR30435:SF1 297 419 3.8E-103 T 22-04-2016 YE2557 25dc598f3d7474a26bfddf2cb94d4ad4 419 SUPERFAMILY SSF117143 73 380 1.83E-76 T 22-04-2016 YE2557 25dc598f3d7474a26bfddf2cb94d4ad4 419 Pfam PF00460 Flagella basal body rod protein 4 33 3.0E-11 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 YE3853 f5e263d7afaa04fa0883f05ccb85fe1a 169 PANTHER PTHR33202:SF6 1 169 1.5E-94 T 22-04-2016 YE3853 f5e263d7afaa04fa0883f05ccb85fe1a 169 PANTHER PTHR33202 1 169 1.5E-94 T 22-04-2016 YE3853 f5e263d7afaa04fa0883f05ccb85fe1a 169 Gene3D G3DSA:1.10.10.10 12 84 6.5E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3853 f5e263d7afaa04fa0883f05ccb85fe1a 169 Pfam PF01475 Ferric uptake regulator family 20 138 7.3E-14 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 YE3853 f5e263d7afaa04fa0883f05ccb85fe1a 169 SUPERFAMILY SSF46785 12 144 3.45E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0654 bfae1bb5889f2dcb8988d8c2c79f714f 520 Pfam PF00682 HMGL-like 4 273 1.8E-106 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 YE0654 bfae1bb5889f2dcb8988d8c2c79f714f 520 PANTHER PTHR10277 1 508 2.4E-268 T 22-04-2016 YE0654 bfae1bb5889f2dcb8988d8c2c79f714f 520 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 499 1.4E-36 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 YE0654 bfae1bb5889f2dcb8988d8c2c79f714f 520 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 YE0654 bfae1bb5889f2dcb8988d8c2c79f714f 520 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 497 2.6E-251 T 22-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 YE0654 bfae1bb5889f2dcb8988d8c2c79f714f 520 SMART SM00917 369 500 6.2E-38 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 YE0654 bfae1bb5889f2dcb8988d8c2c79f714f 520 PANTHER PTHR10277:SF9 1 508 2.4E-268 T 22-04-2016 YE0654 bfae1bb5889f2dcb8988d8c2c79f714f 520 Gene3D G3DSA:3.20.20.70 1 347 8.8E-146 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YE0654 bfae1bb5889f2dcb8988d8c2c79f714f 520 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 YE0654 bfae1bb5889f2dcb8988d8c2c79f714f 520 SUPERFAMILY SSF51569 1 291 9.52E-101 T 22-04-2016 YE0654 bfae1bb5889f2dcb8988d8c2c79f714f 520 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 509 43.318 T 22-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 YE0654 bfae1bb5889f2dcb8988d8c2c79f714f 520 SUPERFAMILY SSF110921 391 499 9.81E-26 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 YE2697 709cea49a80c3f26269e48a8003148eb 626 PANTHER PTHR35370 2 626 0.0 T 22-04-2016 YE2697 709cea49a80c3f26269e48a8003148eb 626 PIRSF PIRSF028304 1 626 8.5E-158 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like YE2697 709cea49a80c3f26269e48a8003148eb 626 PANTHER PTHR35370:SF2 2 626 0.0 T 22-04-2016 YE2697 709cea49a80c3f26269e48a8003148eb 626 Pfam PF05947 Type VI secretion system, ImpG, VasA, VC_A0110 6 623 1.9E-202 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like YE2697 709cea49a80c3f26269e48a8003148eb 626 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 5 625 2.8E-195 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like YE2803 3dd2acf5fed59b82613503ee8b184d07 545 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 321 333 1.4E-9 T 22-04-2016 YE2803 3dd2acf5fed59b82613503ee8b184d07 545 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 73 98 1.4E-9 T 22-04-2016 YE2803 3dd2acf5fed59b82613503ee8b184d07 545 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 228 249 1.4E-9 T 22-04-2016 YE2803 3dd2acf5fed59b82613503ee8b184d07 545 PANTHER PTHR22773:SF56 1 504 8.0E-195 T 22-04-2016 YE2803 3dd2acf5fed59b82613503ee8b184d07 545 PANTHER PTHR22773 1 504 8.0E-195 T 22-04-2016 YE2803 3dd2acf5fed59b82613503ee8b184d07 545 Pfam PF00361 Proton-conducting membrane transporter 132 425 8.2E-56 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 YE2803 3dd2acf5fed59b82613503ee8b184d07 545 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 64 102 3.3E-7 T 22-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal YE3407 39c03c27bfca6559de18869ac32a6505 489 Pfam PF13751 Transposase DDE domain 324 441 1.1E-24 T 22-04-2016 IPR025668 Transposase DDE domain YE3407 39c03c27bfca6559de18869ac32a6505 489 PANTHER PTHR33408 1 481 2.5E-27 T 22-04-2016 YE3407 39c03c27bfca6559de18869ac32a6505 489 Pfam PF05598 Transposase domain (DUF772) 52 127 1.7E-23 T 22-04-2016 IPR008490 Transposase InsH, N-terminal YE0778 2ca8aaabcf8229a4f2907cc0d1fef46e 87 Gene3D G3DSA:1.10.10.10 4 87 2.3E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0778 2ca8aaabcf8229a4f2907cc0d1fef46e 87 Pfam PF04703 FaeA-like protein 38 71 2.9E-4 T 22-04-2016 IPR006793 FaeA-like protein GO:0006355|GO:0009289 YE4051 e5f1d26fa27720a6e4cc2b786a399fd8 447 PANTHER PTHR11606 7 447 1.0E-245 T 22-04-2016 YE4051 e5f1d26fa27720a6e4cc2b786a399fd8 447 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 122 135 - T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 YE4051 e5f1d26fa27720a6e4cc2b786a399fd8 447 Gene3D G3DSA:3.40.192.10 68 188 8.4E-61 T 22-04-2016 YE4051 e5f1d26fa27720a6e4cc2b786a399fd8 447 Gene3D G3DSA:3.40.50.720 209 372 1.6E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain YE4051 e5f1d26fa27720a6e4cc2b786a399fd8 447 PANTHER PTHR11606:SF4 7 447 1.0E-245 T 22-04-2016 YE4051 e5f1d26fa27720a6e4cc2b786a399fd8 447 SUPERFAMILY SSF53223 6 196 6.08E-74 T 22-04-2016 YE4051 e5f1d26fa27720a6e4cc2b786a399fd8 447 PIRSF PIRSF000185 22 447 5.7E-115 T 22-04-2016 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 YE4051 e5f1d26fa27720a6e4cc2b786a399fd8 447 SMART SM00839 204 445 1.9E-91 T 22-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 YE4051 e5f1d26fa27720a6e4cc2b786a399fd8 447 SUPERFAMILY SSF51735 202 446 1.05E-73 T 22-04-2016 IPR016040 NAD(P)-binding domain YE4051 e5f1d26fa27720a6e4cc2b786a399fd8 447 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 57 184 1.1E-50 T 22-04-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 YE4051 e5f1d26fa27720a6e4cc2b786a399fd8 447 Gene3D G3DSA:1.10.285.10 7 67 8.3E-28 T 22-04-2016 YE4051 e5f1d26fa27720a6e4cc2b786a399fd8 447 Gene3D G3DSA:1.10.285.10 373 446 3.1E-25 T 22-04-2016 YE4051 e5f1d26fa27720a6e4cc2b786a399fd8 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 193 215 3.5E-33 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 YE4051 e5f1d26fa27720a6e4cc2b786a399fd8 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 235 255 3.5E-33 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 YE4051 e5f1d26fa27720a6e4cc2b786a399fd8 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 114 128 3.5E-33 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 YE4051 e5f1d26fa27720a6e4cc2b786a399fd8 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 372 383 3.5E-33 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 YE4051 e5f1d26fa27720a6e4cc2b786a399fd8 447 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 202 445 3.1E-85 T 22-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 YE3324 598a13a4161151d58cee4c37cd363aae 346 Gene3D G3DSA:3.20.20.100 1 342 5.1E-106 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YE3324 598a13a4161151d58cee4c37cd363aae 346 Pfam PF00248 Aldo/keto reductase family 16 337 6.8E-74 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YE3324 598a13a4161151d58cee4c37cd363aae 346 PANTHER PTHR11732 1 139 1.4E-216 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta YE3324 598a13a4161151d58cee4c37cd363aae 346 PANTHER PTHR11732 157 346 1.4E-216 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta YE3324 598a13a4161151d58cee4c37cd363aae 346 PANTHER PTHR11732:SF112 1 139 1.4E-216 T 22-04-2016 YE3324 598a13a4161151d58cee4c37cd363aae 346 PANTHER PTHR11732:SF112 157 346 1.4E-216 T 22-04-2016 YE3324 598a13a4161151d58cee4c37cd363aae 346 SUPERFAMILY SSF51430 1 344 6.02E-108 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YE1627 d6b3e20cfdc93aa44d7c0e2c792140da 1176 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 425 1.6E-169 T 22-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 YE1627 d6b3e20cfdc93aa44d7c0e2c792140da 1176 Pfam PF00575 S1 RNA binding domain 36 118 1.4E-16 T 22-04-2016 IPR003029 S1 domain GO:0003676 YE1627 d6b3e20cfdc93aa44d7c0e2c792140da 1176 Pfam PF12111 Polyribonucleotide phosphorylase C terminal 1140 1173 2.0E-13 T 22-04-2016 IPR021968 Polyribonucleotide phosphorylase C-terminal YE1627 d6b3e20cfdc93aa44d7c0e2c792140da 1176 PANTHER PTHR30001 1 659 0.0 T 22-04-2016 YE1627 d6b3e20cfdc93aa44d7c0e2c792140da 1176 PANTHER PTHR30001 679 861 0.0 T 22-04-2016 YE1627 d6b3e20cfdc93aa44d7c0e2c792140da 1176 PANTHER PTHR30001:SF1 1 659 0.0 T 22-04-2016 YE1627 d6b3e20cfdc93aa44d7c0e2c792140da 1176 PANTHER PTHR30001:SF1 679 861 0.0 T 22-04-2016 YE1627 d6b3e20cfdc93aa44d7c0e2c792140da 1176 Pfam PF10150 Ribonuclease E/G family 121 391 4.6E-92 T 22-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 YE1627 d6b3e20cfdc93aa44d7c0e2c792140da 1176 Hamap MF_00970 Ribonuclease E [rne]. 1 1162 39.306 T 22-04-2016 IPR028878 Ribonuclease E GO:0006396|GO:0008995 YE1627 d6b3e20cfdc93aa44d7c0e2c792140da 1176 Gene3D G3DSA:2.40.50.140 31 124 2.2E-36 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE1627 d6b3e20cfdc93aa44d7c0e2c792140da 1176 SMART SM00316 37 119 8.4E-13 T 22-04-2016 IPR022967 RNA-binding domain, S1 YE1627 d6b3e20cfdc93aa44d7c0e2c792140da 1176 SUPERFAMILY SSF50249 40 124 8.29E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE0925 e534b2323db4bdba43f6fe1ed4afa42c 399 Pfam PF00005 ABC transporter 45 192 7.1E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE0925 e534b2323db4bdba43f6fe1ed4afa42c 399 PANTHER PTHR24220:SF374 6 16 9.3E-173 T 22-04-2016 YE0925 e534b2323db4bdba43f6fe1ed4afa42c 399 PANTHER PTHR24220:SF374 41 292 9.3E-173 T 22-04-2016 YE0925 e534b2323db4bdba43f6fe1ed4afa42c 399 Gene3D G3DSA:3.40.50.300 5 264 8.8E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0925 e534b2323db4bdba43f6fe1ed4afa42c 399 SUPERFAMILY SSF52540 43 271 2.83E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0925 e534b2323db4bdba43f6fe1ed4afa42c 399 Gene3D G3DSA:3.10.580.10 272 395 3.5E-23 T 22-04-2016 YE0925 e534b2323db4bdba43f6fe1ed4afa42c 399 SUPERFAMILY SSF54631 275 396 7.45E-14 T 22-04-2016 YE0925 e534b2323db4bdba43f6fe1ed4afa42c 399 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE0925 e534b2323db4bdba43f6fe1ed4afa42c 399 SMART SM00382 53 242 1.0E-19 T 22-04-2016 IPR003593 AAA+ ATPase domain YE0925 e534b2323db4bdba43f6fe1ed4afa42c 399 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 37 394 3.6E-176 T 22-04-2016 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 YE0925 e534b2323db4bdba43f6fe1ed4afa42c 399 PANTHER PTHR24220 6 16 9.3E-173 T 22-04-2016 YE0925 e534b2323db4bdba43f6fe1ed4afa42c 399 PANTHER PTHR24220 41 292 9.3E-173 T 22-04-2016 YE0925 e534b2323db4bdba43f6fe1ed4afa42c 399 Pfam PF00571 CBS domain 346 393 2.5E-6 T 22-04-2016 IPR000644 CBS domain YE4087 a680cbfd61c69d0a69ae985831b5eb6d 443 Gene3D G3DSA:1.20.1250.20 243 436 1.2E-38 T 22-04-2016 YE4087 a680cbfd61c69d0a69ae985831b5eb6d 443 Gene3D G3DSA:1.20.1250.20 23 211 7.2E-53 T 22-04-2016 YE4087 a680cbfd61c69d0a69ae985831b5eb6d 443 PANTHER PTHR11662:SF286 6 442 2.7E-240 T 22-04-2016 YE4087 a680cbfd61c69d0a69ae985831b5eb6d 443 SUPERFAMILY SSF103473 21 434 9.29E-82 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE4087 a680cbfd61c69d0a69ae985831b5eb6d 443 Pfam PF07690 Major Facilitator Superfamily 36 396 1.6E-49 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YE4087 a680cbfd61c69d0a69ae985831b5eb6d 443 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 413 8.7E-144 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 YE4087 a680cbfd61c69d0a69ae985831b5eb6d 443 PANTHER PTHR11662 6 442 2.7E-240 T 22-04-2016 YE4087 a680cbfd61c69d0a69ae985831b5eb6d 443 PIRSF PIRSF002808 6 443 1.5E-143 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 YE1521 dddd723f96a77322dd322f146ffb08a4 574 PANTHER PTHR24222 4 574 2.3E-264 T 22-04-2016 YE1521 dddd723f96a77322dd322f146ffb08a4 574 SUPERFAMILY SSF52540 334 572 1.25E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1521 dddd723f96a77322dd322f146ffb08a4 574 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 8 534 1.8E-158 T 22-04-2016 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0006810|GO:0016021|GO:0042626 YE1521 dddd723f96a77322dd322f146ffb08a4 574 Pfam PF00664 ABC transporter transmembrane region 37 287 5.3E-10 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YE1521 dddd723f96a77322dd322f146ffb08a4 574 SUPERFAMILY SSF90123 7 327 3.53E-41 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YE1521 dddd723f96a77322dd322f146ffb08a4 574 SMART SM00382 365 550 5.5E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain YE1521 dddd723f96a77322dd322f146ffb08a4 574 PANTHER PTHR24222:SF30 4 574 2.3E-264 T 22-04-2016 YE1521 dddd723f96a77322dd322f146ffb08a4 574 ProSitePatterns PS00211 ABC transporters family signature. 476 490 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE1521 dddd723f96a77322dd322f146ffb08a4 574 Gene3D G3DSA:3.40.50.300 339 569 9.8E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1521 dddd723f96a77322dd322f146ffb08a4 574 Pfam PF00005 ABC transporter 356 503 9.3E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE1521 dddd723f96a77322dd322f146ffb08a4 574 Gene3D G3DSA:1.20.1560.10 7 327 1.4E-30 T 22-04-2016 YE0912 b9ddd5cf08d3d8b914f5dd895c6aa9d8 267 PANTHER PTHR11732:SF100 1 267 1.9E-172 T 22-04-2016 YE0912 b9ddd5cf08d3d8b914f5dd895c6aa9d8 267 Pfam PF00248 Aldo/keto reductase family 9 250 3.0E-50 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YE0912 b9ddd5cf08d3d8b914f5dd895c6aa9d8 267 PIRSF PIRSF000097 1 265 5.6E-67 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YE0912 b9ddd5cf08d3d8b914f5dd895c6aa9d8 267 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 114 131 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 YE0912 b9ddd5cf08d3d8b914f5dd895c6aa9d8 267 SUPERFAMILY SSF51430 2 259 6.15E-80 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YE0912 b9ddd5cf08d3d8b914f5dd895c6aa9d8 267 Gene3D G3DSA:3.20.20.100 1 259 8.9E-88 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YE0912 b9ddd5cf08d3d8b914f5dd895c6aa9d8 267 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 29 46 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 YE0912 b9ddd5cf08d3d8b914f5dd895c6aa9d8 267 PRINTS PR00069 Aldo-keto reductase signature 149 178 3.2E-46 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YE0912 b9ddd5cf08d3d8b914f5dd895c6aa9d8 267 PRINTS PR00069 Aldo-keto reductase signature 25 49 3.2E-46 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YE0912 b9ddd5cf08d3d8b914f5dd895c6aa9d8 267 PRINTS PR00069 Aldo-keto reductase signature 81 99 3.2E-46 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YE0912 b9ddd5cf08d3d8b914f5dd895c6aa9d8 267 PRINTS PR00069 Aldo-keto reductase signature 186 210 3.2E-46 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YE0912 b9ddd5cf08d3d8b914f5dd895c6aa9d8 267 PRINTS PR00069 Aldo-keto reductase signature 114 131 3.2E-46 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YE0912 b9ddd5cf08d3d8b914f5dd895c6aa9d8 267 PANTHER PTHR11732 1 267 1.9E-172 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta YE1933 725cfb6c9001d9c2bc0601ada34446b7 1329 Gene3D G3DSA:3.40.605.10 664 904 3.5E-68 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 YE1933 725cfb6c9001d9c2bc0601ada34446b7 1329 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 149 260 2.9E-45 T 22-04-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 YE1933 725cfb6c9001d9c2bc0601ada34446b7 1329 PANTHER PTHR11699:SF18 633 1115 5.9E-181 T 22-04-2016 YE1933 725cfb6c9001d9c2bc0601ada34446b7 1329 Pfam PF01619 Proline dehydrogenase 271 570 5.4E-99 T 22-04-2016 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|UniPathway: UPA00261 YE1933 725cfb6c9001d9c2bc0601ada34446b7 1329 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 889 896 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 YE1933 725cfb6c9001d9c2bc0601ada34446b7 1329 Pfam PF00171 Aldehyde dehydrogenase family 667 1111 1.1E-114 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 YE1933 725cfb6c9001d9c2bc0601ada34446b7 1329 SUPERFAMILY SSF51730 263 619 2.47E-123 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like YE1933 725cfb6c9001d9c2bc0601ada34446b7 1329 SUPERFAMILY SSF81935 89 262 4.84E-65 T 22-04-2016 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 YE1933 725cfb6c9001d9c2bc0601ada34446b7 1329 PANTHER PTHR11699 633 1115 5.9E-181 T 22-04-2016 YE1933 725cfb6c9001d9c2bc0601ada34446b7 1329 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 917 928 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 YE1933 725cfb6c9001d9c2bc0601ada34446b7 1329 Gene3D G3DSA:3.20.20.220 262 618 7.4E-122 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like YE1933 725cfb6c9001d9c2bc0601ada34446b7 1329 SUPERFAMILY SSF53720 640 1117 1.44E-127 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 YE1933 725cfb6c9001d9c2bc0601ada34446b7 1329 Gene3D G3DSA:1.20.5.550 88 139 6.0E-26 T 22-04-2016 IPR024090 Proline dehydrogenase PutA, domain I GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 YE1933 725cfb6c9001d9c2bc0601ada34446b7 1329 SUPERFAMILY SSF47598 4 45 1.45E-10 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 YE1933 725cfb6c9001d9c2bc0601ada34446b7 1329 Gene3D G3DSA:1.10.2060.10 143 261 9.1E-54 T 22-04-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 YE1933 725cfb6c9001d9c2bc0601ada34446b7 1329 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 611 1120 3.4E-250 T 22-04-2016 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 YE1933 725cfb6c9001d9c2bc0601ada34446b7 1329 Gene3D G3DSA:3.40.309.10 905 1097 7.6E-47 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 YE1933 725cfb6c9001d9c2bc0601ada34446b7 1329 PIRSF PIRSF000197 75 1329 0.0 T 22-04-2016 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 YE3327 2ceb1c6b4cb8166d5814a7a4a8d9ed6a 718 Gene3D G3DSA:2.30.38.10 534 613 4.0E-14 T 22-04-2016 YE3327 2ceb1c6b4cb8166d5814a7a4a8d9ed6a 718 Pfam PF00501 AMP-binding enzyme 233 619 1.8E-66 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 YE3327 2ceb1c6b4cb8166d5814a7a4a8d9ed6a 718 Pfam PF01553 Acyltransferase 24 136 2.9E-14 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 YE3327 2ceb1c6b4cb8166d5814a7a4a8d9ed6a 718 Hamap MF_01162 Bifunctional protein Aas [aas]. 1 717 57.78 T 22-04-2016 IPR023775 Bifunctional protein Aas GO:0006631|GO:0008654|GO:0008779|GO:0008922 KEGG: 00071+6.2.1.20|KEGG: 00564+2.3.1.40|MetaCyc: PWY-6622|MetaCyc: PWY-7032 YE3327 2ceb1c6b4cb8166d5814a7a4a8d9ed6a 718 Gene3D G3DSA:3.30.300.30 617 713 5.6E-9 T 22-04-2016 YE3327 2ceb1c6b4cb8166d5814a7a4a8d9ed6a 718 SUPERFAMILY SSF69593 10 167 3.66E-17 T 22-04-2016 YE3327 2ceb1c6b4cb8166d5814a7a4a8d9ed6a 718 SUPERFAMILY SSF56801 215 714 4.45E-98 T 22-04-2016 YE3327 2ceb1c6b4cb8166d5814a7a4a8d9ed6a 718 PANTHER PTHR24096 124 716 0.0 T 22-04-2016 YE3327 2ceb1c6b4cb8166d5814a7a4a8d9ed6a 718 Gene3D G3DSA:3.40.50.980 230 376 6.3E-18 T 22-04-2016 YE3327 2ceb1c6b4cb8166d5814a7a4a8d9ed6a 718 SMART SM00563 30 140 6.4E-22 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 YE3327 2ceb1c6b4cb8166d5814a7a4a8d9ed6a 718 Gene3D G3DSA:3.40.50.980 377 533 4.9E-39 T 22-04-2016 YE3327 2ceb1c6b4cb8166d5814a7a4a8d9ed6a 718 PANTHER PTHR24096:SF177 124 716 0.0 T 22-04-2016 YE3327 2ceb1c6b4cb8166d5814a7a4a8d9ed6a 718 Pfam PF13193 AMP-binding enzyme C-terminal domain 631 701 2.4E-5 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain YE3327 2ceb1c6b4cb8166d5814a7a4a8d9ed6a 718 ProSitePatterns PS00455 Putative AMP-binding domain signature. 370 381 - T 22-04-2016 IPR020845 AMP-binding, conserved site YE2069 13908a858cf13c32a4192f2e811806bf 246 PANTHER PTHR24322 11 138 2.5E-53 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE2069 13908a858cf13c32a4192f2e811806bf 246 PANTHER PTHR24322 154 186 2.5E-53 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE2069 13908a858cf13c32a4192f2e811806bf 246 Gene3D G3DSA:3.40.50.720 7 245 2.9E-80 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2069 13908a858cf13c32a4192f2e811806bf 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 185 0.0044 T 22-04-2016 YE2069 13908a858cf13c32a4192f2e811806bf 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.6E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE2069 13908a858cf13c32a4192f2e811806bf 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.6E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE2069 13908a858cf13c32a4192f2e811806bf 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 1.6E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE2069 13908a858cf13c32a4192f2e811806bf 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.6E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE2069 13908a858cf13c32a4192f2e811806bf 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.6E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE2069 13908a858cf13c32a4192f2e811806bf 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.6E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE2069 13908a858cf13c32a4192f2e811806bf 246 SUPERFAMILY SSF51735 7 245 2.84E-78 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2069 13908a858cf13c32a4192f2e811806bf 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.5E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE2069 13908a858cf13c32a4192f2e811806bf 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.5E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE2069 13908a858cf13c32a4192f2e811806bf 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 1.5E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE2069 13908a858cf13c32a4192f2e811806bf 246 PANTHER PTHR24322:SF608 11 138 2.5E-53 T 22-04-2016 YE2069 13908a858cf13c32a4192f2e811806bf 246 PANTHER PTHR24322:SF608 154 186 2.5E-53 T 22-04-2016 YE2069 13908a858cf13c32a4192f2e811806bf 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 245 1.8E-61 T 22-04-2016 YE0953 bbe309e8760adb00ae5f3270e2e562c6 572 ProSitePatterns PS00145 Urease active site. 322 338 - T 22-04-2016 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YE0953 bbe309e8760adb00ae5f3270e2e562c6 572 SUPERFAMILY SSF51338 414 484 5.61E-10 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YE0953 bbe309e8760adb00ae5f3270e2e562c6 572 ProSitePatterns PS01120 Urease nickel ligands signature. 132 145 - T 22-04-2016 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YE0953 bbe309e8760adb00ae5f3270e2e562c6 572 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 3 571 1.7E-283 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YE0953 bbe309e8760adb00ae5f3270e2e562c6 572 PANTHER PTHR22642:SF7 325 506 3.9E-224 T 22-04-2016 YE0953 bbe309e8760adb00ae5f3270e2e562c6 572 PANTHER PTHR22642:SF7 25 301 3.9E-224 T 22-04-2016 YE0953 bbe309e8760adb00ae5f3270e2e562c6 572 PANTHER PTHR22642 325 506 3.9E-224 T 22-04-2016 YE0953 bbe309e8760adb00ae5f3270e2e562c6 572 PANTHER PTHR22642 25 301 3.9E-224 T 22-04-2016 YE0953 bbe309e8760adb00ae5f3270e2e562c6 572 Pfam PF00449 Urease alpha-subunit, N-terminal domain 3 124 4.4E-51 T 22-04-2016 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YE0953 bbe309e8760adb00ae5f3270e2e562c6 572 Pfam PF01979 Amidohydrolase family 130 459 7.5E-71 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 YE0953 bbe309e8760adb00ae5f3270e2e562c6 572 Hamap MF_01953 Urease subunit alpha [ureC]. 2 572 53.59 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YE0953 bbe309e8760adb00ae5f3270e2e562c6 572 Gene3D G3DSA:2.30.40.10 68 149 3.4E-16 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YE0953 bbe309e8760adb00ae5f3270e2e562c6 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 432 445 3.8E-27 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YE0953 bbe309e8760adb00ae5f3270e2e562c6 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 300 317 3.8E-27 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YE0953 bbe309e8760adb00ae5f3270e2e562c6 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 406 421 3.8E-27 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YE0953 bbe309e8760adb00ae5f3270e2e562c6 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 339 355 3.8E-27 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YE0953 bbe309e8760adb00ae5f3270e2e562c6 572 SUPERFAMILY SSF51338 2 183 1.39E-56 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YE0953 bbe309e8760adb00ae5f3270e2e562c6 572 SUPERFAMILY SSF51556 486 571 1.49E-178 T 22-04-2016 IPR032466 Metal-dependent hydrolase YE0953 bbe309e8760adb00ae5f3270e2e562c6 572 SUPERFAMILY SSF51556 135 437 1.49E-178 T 22-04-2016 IPR032466 Metal-dependent hydrolase YE0953 bbe309e8760adb00ae5f3270e2e562c6 572 Gene3D G3DSA:3.20.20.140 493 570 6.0E-185 T 22-04-2016 YE0953 bbe309e8760adb00ae5f3270e2e562c6 572 Gene3D G3DSA:3.20.20.140 150 434 6.0E-185 T 22-04-2016 YE4204 e7a68228f63e02ea425e327749880612 456 Gene3D G3DSA:2.160.10.10 326 455 4.5E-34 T 22-04-2016 YE4204 e7a68228f63e02ea425e327749880612 456 PANTHER PTHR22572:SF115 7 449 9.3E-234 T 22-04-2016 YE4204 e7a68228f63e02ea425e327749880612 456 SUPERFAMILY SSF53448 5 252 2.41E-67 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YE4204 e7a68228f63e02ea425e327749880612 456 Gene3D G3DSA:3.90.550.10 1 244 3.4E-72 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YE4204 e7a68228f63e02ea425e327749880612 456 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 403 431 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 YE4204 e7a68228f63e02ea425e327749880612 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 267 299 1.4E-4 T 22-04-2016 IPR001451 Hexapeptide repeat YE4204 e7a68228f63e02ea425e327749880612 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 395 429 1.7E-6 T 22-04-2016 IPR001451 Hexapeptide repeat YE4204 e7a68228f63e02ea425e327749880612 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 322 352 8.3E-4 T 22-04-2016 IPR001451 Hexapeptide repeat YE4204 e7a68228f63e02ea425e327749880612 456 Pfam PF12804 MobA-like NTP transferase domain 8 123 9.3E-23 T 22-04-2016 IPR025877 MobA-like NTP transferase YE4204 e7a68228f63e02ea425e327749880612 456 SUPERFAMILY SSF51161 255 437 1.18E-51 T 22-04-2016 IPR011004 Trimeric LpxA-like YE4204 e7a68228f63e02ea425e327749880612 456 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 5 452 43.277 T 22-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 YE4204 e7a68228f63e02ea425e327749880612 456 Gene3D G3DSA:2.160.10.10 245 325 5.7E-17 T 22-04-2016 YE4204 e7a68228f63e02ea425e327749880612 456 PANTHER PTHR22572 7 449 9.3E-234 T 22-04-2016 YE4204 e7a68228f63e02ea425e327749880612 456 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 6 455 9.9E-205 T 22-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 YE3928 147b0cb6460b2fc8393eeb46b735ddcb 704 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 2.1E-31 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 YE3928 147b0cb6460b2fc8393eeb46b735ddcb 704 SMART SM00889 487 609 2.9E-70 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 YE3928 147b0cb6460b2fc8393eeb46b735ddcb 704 SUPERFAMILY SSF52540 6 287 1.97E-107 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3928 147b0cb6460b2fc8393eeb46b735ddcb 704 SUPERFAMILY SSF54211 486 610 2.48E-39 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YE3928 147b0cb6460b2fc8393eeb46b735ddcb 704 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YE3928 147b0cb6460b2fc8393eeb46b735ddcb 704 PRINTS PR00315 GTP-binding elongation factor signature 85 95 1.7E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YE3928 147b0cb6460b2fc8393eeb46b735ddcb 704 PRINTS PR00315 GTP-binding elongation factor signature 101 112 1.7E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YE3928 147b0cb6460b2fc8393eeb46b735ddcb 704 PRINTS PR00315 GTP-binding elongation factor signature 137 146 1.7E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YE3928 147b0cb6460b2fc8393eeb46b735ddcb 704 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.7E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YE3928 147b0cb6460b2fc8393eeb46b735ddcb 704 SUPERFAMILY SSF50447 271 411 2.43E-35 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain YE3928 147b0cb6460b2fc8393eeb46b735ddcb 704 SUPERFAMILY SSF54980 611 700 1.01E-27 T 22-04-2016 IPR009022 Elongation factor G, III-V domain YE3928 147b0cb6460b2fc8393eeb46b735ddcb 704 SMART SM00838 611 698 3.1E-51 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain YE3928 147b0cb6460b2fc8393eeb46b735ddcb 704 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 703 0.0 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 YE3928 147b0cb6460b2fc8393eeb46b735ddcb 704 Gene3D G3DSA:3.30.70.870 413 487 4.7E-39 T 22-04-2016 YE3928 147b0cb6460b2fc8393eeb46b735ddcb 704 PANTHER PTHR23115:SF66 310 702 0.0 T 22-04-2016 YE3928 147b0cb6460b2fc8393eeb46b735ddcb 704 PANTHER PTHR23115:SF66 6 184 0.0 T 22-04-2016 YE3928 147b0cb6460b2fc8393eeb46b735ddcb 704 PANTHER PTHR23115:SF66 261 289 0.0 T 22-04-2016 YE3928 147b0cb6460b2fc8393eeb46b735ddcb 704 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site YE3928 147b0cb6460b2fc8393eeb46b735ddcb 704 Pfam PF03764 Elongation factor G, domain IV 486 609 9.1E-45 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 YE3928 147b0cb6460b2fc8393eeb46b735ddcb 704 PANTHER PTHR23115 310 702 0.0 T 22-04-2016 YE3928 147b0cb6460b2fc8393eeb46b735ddcb 704 PANTHER PTHR23115 6 184 0.0 T 22-04-2016 YE3928 147b0cb6460b2fc8393eeb46b735ddcb 704 PANTHER PTHR23115 261 289 0.0 T 22-04-2016 YE3928 147b0cb6460b2fc8393eeb46b735ddcb 704 Pfam PF03144 Elongation factor Tu domain 2 331 398 9.5E-17 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 YE3928 147b0cb6460b2fc8393eeb46b735ddcb 704 Gene3D G3DSA:3.40.50.300 6 293 7.1E-105 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3928 147b0cb6460b2fc8393eeb46b735ddcb 704 Pfam PF14492 Elongation Factor G, domain II 411 485 7.7E-34 T 22-04-2016 IPR009022 Elongation factor G, III-V domain YE3928 147b0cb6460b2fc8393eeb46b735ddcb 704 Gene3D G3DSA:3.30.230.10 491 609 3.0E-46 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YE3928 147b0cb6460b2fc8393eeb46b735ddcb 704 Hamap MF_00054_B Elongation factor G [fusA]. 6 702 111.459 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 YE3928 147b0cb6460b2fc8393eeb46b735ddcb 704 Gene3D G3DSA:2.40.30.10 312 412 3.5E-38 T 22-04-2016 YE3928 147b0cb6460b2fc8393eeb46b735ddcb 704 Gene3D G3DSA:3.30.70.240 610 696 9.0E-33 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain YE3928 147b0cb6460b2fc8393eeb46b735ddcb 704 Pfam PF00679 Elongation factor G C-terminus 611 696 2.1E-29 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain YE3928 147b0cb6460b2fc8393eeb46b735ddcb 704 SUPERFAMILY SSF54980 411 488 1.73E-25 T 22-04-2016 IPR009022 Elongation factor G, III-V domain YE3928 147b0cb6460b2fc8393eeb46b735ddcb 704 Pfam PF00009 Elongation factor Tu GTP binding domain 9 287 6.1E-69 T 22-04-2016 YE1643 f0392a1d771641484af13014d4f608b5 477 Pfam PF02378 Phosphotransferase system, EIIC 13 320 1.4E-83 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 YE1643 f0392a1d771641484af13014d4f608b5 477 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 378 460 3.5E-25 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YE1643 f0392a1d771641484af13014d4f608b5 477 Pfam PF00367 phosphotransferase system, EIIB 405 436 5.4E-14 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 YE1643 f0392a1d771641484af13014d4f608b5 477 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 414 431 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 YE1643 f0392a1d771641484af13014d4f608b5 477 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 52 331 8.1E-88 T 22-04-2016 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 YE1643 f0392a1d771641484af13014d4f608b5 477 PANTHER PTHR30009 6 477 9.3E-262 T 22-04-2016 YE1643 f0392a1d771641484af13014d4f608b5 477 Gene3D G3DSA:3.30.1360.60 400 474 3.8E-27 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YE1643 f0392a1d771641484af13014d4f608b5 477 SUPERFAMILY SSF55604 402 474 2.35E-20 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YE1643 f0392a1d771641484af13014d4f608b5 477 PANTHER PTHR30009:SF2 6 477 9.3E-262 T 22-04-2016 YE1643 f0392a1d771641484af13014d4f608b5 477 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 475 1.5E-228 T 22-04-2016 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0015758|GO:0016021 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YE2504 393f4a7e2b6d810c0a9b4513344e0d07 259 SUPERFAMILY SSF46785 5 71 3.57E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2504 393f4a7e2b6d810c0a9b4513344e0d07 259 PANTHER PTHR30363 1 252 8.8E-156 T 22-04-2016 YE2504 393f4a7e2b6d810c0a9b4513344e0d07 259 SMART SM01134 73 233 1.3E-61 T 22-04-2016 YE2504 393f4a7e2b6d810c0a9b4513344e0d07 259 Gene3D G3DSA:3.40.50.1360 76 221 7.3E-9 T 22-04-2016 YE2504 393f4a7e2b6d810c0a9b4513344e0d07 259 SMART SM00420 6 58 1.1E-23 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YE2504 393f4a7e2b6d810c0a9b4513344e0d07 259 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 1.2E-17 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YE2504 393f4a7e2b6d810c0a9b4513344e0d07 259 Pfam PF00455 DeoR C terminal sensor domain 77 232 7.1E-48 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain YE2504 393f4a7e2b6d810c0a9b4513344e0d07 259 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.4E-6 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YE2504 393f4a7e2b6d810c0a9b4513344e0d07 259 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.4E-6 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YE2504 393f4a7e2b6d810c0a9b4513344e0d07 259 SUPERFAMILY SSF100950 75 233 5.23E-26 T 22-04-2016 YE2504 393f4a7e2b6d810c0a9b4513344e0d07 259 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 YE2504 393f4a7e2b6d810c0a9b4513344e0d07 259 PANTHER PTHR30363:SF5 1 252 8.8E-156 T 22-04-2016 YE2504 393f4a7e2b6d810c0a9b4513344e0d07 259 Gene3D G3DSA:1.10.10.10 5 57 1.6E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0101 e0ff96c99a420cbcd464b431117b4720 79 Pfam PF06005 Protein of unknown function (DUF904) 1 78 3.6E-29 T 22-04-2016 IPR009252 Cell division protein ZapB GO:0000917|GO:0005737|GO:0043093 YE0101 e0ff96c99a420cbcd464b431117b4720 79 Gene3D G3DSA:1.10.287.40 23 78 7.1E-4 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 YE0101 e0ff96c99a420cbcd464b431117b4720 79 Hamap MF_01196 Cell division protein ZapB [zapB]. 1 79 18.076 T 22-04-2016 IPR009252 Cell division protein ZapB GO:0000917|GO:0005737|GO:0043093 YE2905 83475d23628037386edb8ee951ea74c3 248 PANTHER PTHR10108 9 168 6.4E-47 T 22-04-2016 YE2905 83475d23628037386edb8ee951ea74c3 248 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 9 247 8.3E-65 T 22-04-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519|UniPathway: UPA00078 YE2905 83475d23628037386edb8ee951ea74c3 248 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 1 247 29.265 T 22-04-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519|UniPathway: UPA00078 YE2905 83475d23628037386edb8ee951ea74c3 248 PANTHER PTHR10108:SF855 9 168 6.4E-47 T 22-04-2016 YE2905 83475d23628037386edb8ee951ea74c3 248 Gene3D G3DSA:3.40.50.150 8 175 1.0E-35 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE2905 83475d23628037386edb8ee951ea74c3 248 SUPERFAMILY SSF53335 7 240 8.59E-37 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE2905 83475d23628037386edb8ee951ea74c3 248 Pfam PF08241 Methyltransferase domain 44 135 7.3E-23 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 YE3207 29b2269f11d39d8686bb400e2650f90a 352 Gene3D G3DSA:3.30.1490.100 237 350 7.8E-43 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE3207 29b2269f11d39d8686bb400e2650f90a 352 Pfam PF00817 impB/mucB/samB family 7 154 5.3E-50 T 22-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE3207 29b2269f11d39d8686bb400e2650f90a 352 Gene3D G3DSA:3.30.70.270 66 164 6.0E-35 T 22-04-2016 YE3207 29b2269f11d39d8686bb400e2650f90a 352 Pfam PF11798 IMS family HHH motif 167 197 1.4E-8 T 22-04-2016 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE3207 29b2269f11d39d8686bb400e2650f90a 352 Pfam PF11799 impB/mucB/samB family C-terminal domain 235 342 1.2E-8 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE3207 29b2269f11d39d8686bb400e2650f90a 352 SUPERFAMILY SSF100879 241 349 7.65E-27 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE3207 29b2269f11d39d8686bb400e2650f90a 352 SUPERFAMILY SSF56672 1 234 9.78E-94 T 22-04-2016 YE3207 29b2269f11d39d8686bb400e2650f90a 352 Gene3D G3DSA:1.10.150.20 165 234 2.1E-26 T 22-04-2016 YE3207 29b2269f11d39d8686bb400e2650f90a 352 PANTHER PTHR11076:SF32 1 347 3.5E-223 T 22-04-2016 YE3207 29b2269f11d39d8686bb400e2650f90a 352 Hamap MF_01113 DNA polymerase IV [dinB]. 1 349 37.39 T 22-04-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE3207 29b2269f11d39d8686bb400e2650f90a 352 PANTHER PTHR11076 1 347 3.5E-223 T 22-04-2016 YE4036 e43ec134bcfb9ba85fda249843b7c5c0 548 Pfam PF05683 Fumarase C-terminus 332 537 1.5E-88 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 YE4036 e43ec134bcfb9ba85fda249843b7c5c0 548 PANTHER PTHR30389 3 548 0.0 T 22-04-2016 YE4036 e43ec134bcfb9ba85fda249843b7c5c0 548 PANTHER PTHR30389:SF6 3 548 0.0 T 22-04-2016 YE4036 e43ec134bcfb9ba85fda249843b7c5c0 548 PIRSF PIRSF001394 30 548 3.6E-214 T 22-04-2016 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 YE4036 e43ec134bcfb9ba85fda249843b7c5c0 548 Gene3D G3DSA:3.20.130.10 348 537 1.8E-69 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 YE4036 e43ec134bcfb9ba85fda249843b7c5c0 548 SUPERFAMILY SSF117457 361 536 6.15E-59 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 YE4036 e43ec134bcfb9ba85fda249843b7c5c0 548 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 372 536 1.5E-56 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 YE4036 e43ec134bcfb9ba85fda249843b7c5c0 548 ProSitePatterns PS00163 Fumarate lyases signature. 456 465 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 YE4036 e43ec134bcfb9ba85fda249843b7c5c0 548 Pfam PF05681 Fumarate hydratase (Fumerase) 52 326 3.1E-78 T 22-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 YE3892 eb6936db2fc263a4b61c6b0f23ba7e61 458 Gene3D G3DSA:3.40.50.720 1 152 3.0E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3892 eb6936db2fc263a4b61c6b0f23ba7e61 458 Gene3D G3DSA:3.40.50.720 233 376 4.1E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3892 eb6936db2fc263a4b61c6b0f23ba7e61 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 5.2E-35 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 YE3892 eb6936db2fc263a4b61c6b0f23ba7e61 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 5.2E-35 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 YE3892 eb6936db2fc263a4b61c6b0f23ba7e61 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 5.2E-35 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 YE3892 eb6936db2fc263a4b61c6b0f23ba7e61 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 5.2E-35 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 YE3892 eb6936db2fc263a4b61c6b0f23ba7e61 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 5.2E-35 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 YE3892 eb6936db2fc263a4b61c6b0f23ba7e61 458 Pfam PF02080 TrkA-C domain 391 451 1.3E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YE3892 eb6936db2fc263a4b61c6b0f23ba7e61 458 Pfam PF02080 TrkA-C domain 156 225 5.9E-12 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YE3892 eb6936db2fc263a4b61c6b0f23ba7e61 458 Gene3D G3DSA:3.30.70.1450 153 226 1.9E-4 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YE3892 eb6936db2fc263a4b61c6b0f23ba7e61 458 SUPERFAMILY SSF116726 391 440 5.36E-8 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YE3892 eb6936db2fc263a4b61c6b0f23ba7e61 458 SUPERFAMILY SSF116726 148 226 2.75E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YE3892 eb6936db2fc263a4b61c6b0f23ba7e61 458 Gene3D G3DSA:3.30.70.1450 391 437 3.7E-5 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YE3892 eb6936db2fc263a4b61c6b0f23ba7e61 458 PANTHER PTHR13789 416 438 5.9E-86 T 22-04-2016 YE3892 eb6936db2fc263a4b61c6b0f23ba7e61 458 PANTHER PTHR13789 1 170 5.9E-86 T 22-04-2016 YE3892 eb6936db2fc263a4b61c6b0f23ba7e61 458 SUPERFAMILY SSF51735 232 376 5.43E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3892 eb6936db2fc263a4b61c6b0f23ba7e61 458 SUPERFAMILY SSF51735 1 152 1.19E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3892 eb6936db2fc263a4b61c6b0f23ba7e61 458 PANTHER PTHR13789:SF225 416 438 5.9E-86 T 22-04-2016 YE3892 eb6936db2fc263a4b61c6b0f23ba7e61 458 PANTHER PTHR13789:SF225 1 170 5.9E-86 T 22-04-2016 YE3892 eb6936db2fc263a4b61c6b0f23ba7e61 458 Pfam PF02254 TrkA-N domain 3 124 9.7E-30 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 YE3892 eb6936db2fc263a4b61c6b0f23ba7e61 458 Pfam PF02254 TrkA-N domain 235 350 8.8E-25 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 YE2397 32286092cda9e579ee4b16ff09f745f8 598 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 1 563 37.202 T 22-04-2016 YE2397 32286092cda9e579ee4b16ff09f745f8 598 Pfam PF02938 GAD domain 307 406 1.2E-30 T 22-04-2016 IPR029351 GAD domain YE2397 32286092cda9e579ee4b16ff09f745f8 598 SUPERFAMILY SSF55261 288 419 3.11E-46 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 YE2397 32286092cda9e579ee4b16ff09f745f8 598 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 558 3.8E-109 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YE2397 32286092cda9e579ee4b16ff09f745f8 598 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 1.4E-17 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 YE2397 32286092cda9e579ee4b16ff09f745f8 598 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 584 2.5E-276 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 YE2397 32286092cda9e579ee4b16ff09f745f8 598 Gene3D G3DSA:3.30.930.10 414 584 4.5E-114 T 22-04-2016 YE2397 32286092cda9e579ee4b16ff09f745f8 598 Gene3D G3DSA:3.30.930.10 131 275 4.5E-114 T 22-04-2016 YE2397 32286092cda9e579ee4b16ff09f745f8 598 PANTHER PTHR22594:SF5 370 571 8.8E-260 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 YE2397 32286092cda9e579ee4b16ff09f745f8 598 PANTHER PTHR22594:SF5 1 296 8.8E-260 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 YE2397 32286092cda9e579ee4b16ff09f745f8 598 PANTHER PTHR22594 370 571 8.8E-260 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YE2397 32286092cda9e579ee4b16ff09f745f8 598 PANTHER PTHR22594 1 296 8.8E-260 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YE2397 32286092cda9e579ee4b16ff09f745f8 598 SUPERFAMILY SSF50249 1 105 1.33E-34 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE2397 32286092cda9e579ee4b16ff09f745f8 598 Gene3D G3DSA:3.30.1360.30 276 413 1.3E-48 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 YE2397 32286092cda9e579ee4b16ff09f745f8 598 Gene3D G3DSA:2.40.50.140 1 106 1.9E-40 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE2397 32286092cda9e579ee4b16ff09f745f8 598 SUPERFAMILY SSF55681 420 583 3.13E-105 T 22-04-2016 YE2397 32286092cda9e579ee4b16ff09f745f8 598 SUPERFAMILY SSF55681 108 287 3.13E-105 T 22-04-2016 YE2397 32286092cda9e579ee4b16ff09f745f8 598 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 3.2E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YE2397 32286092cda9e579ee4b16ff09f745f8 598 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 3.2E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YE2397 32286092cda9e579ee4b16ff09f745f8 598 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 3.2E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YE2397 32286092cda9e579ee4b16ff09f745f8 598 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 3.2E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YE3910 5e8a0524dabb069c2dce085b3d078252 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 1.6E-26 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3910 5e8a0524dabb069c2dce085b3d078252 101 PANTHER PTHR19836 1 101 4.4E-60 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3910 5e8a0524dabb069c2dce085b3d078252 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.588 T 22-04-2016 IPR023036 Ribosomal protein S14, bacterial/plastid YE3910 5e8a0524dabb069c2dce085b3d078252 101 SUPERFAMILY SSF57716 2 101 1.71E-36 T 22-04-2016 YE3910 5e8a0524dabb069c2dce085b3d078252 101 Gene3D G3DSA:4.10.830.10 41 101 1.8E-31 T 22-04-2016 YE3910 5e8a0524dabb069c2dce085b3d078252 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 22-04-2016 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 YE2696 f1118f248a62cb2db4b135def0c7b9bf 890 SUPERFAMILY SSF81923 15 126 7.98E-18 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 YE2696 f1118f248a62cb2db4b135def0c7b9bf 890 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 652 670 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 YE2696 f1118f248a62cb2db4b135def0c7b9bf 890 Gene3D G3DSA:1.10.1780.10 11 130 1.3E-17 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 YE2696 f1118f248a62cb2db4b135def0c7b9bf 890 Pfam PF07724 AAA domain (Cdc48 subfamily) 618 784 1.8E-37 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 YE2696 f1118f248a62cb2db4b135def0c7b9bf 890 SUPERFAMILY SSF52540 569 861 2.77E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2696 f1118f248a62cb2db4b135def0c7b9bf 890 PANTHER PTHR11638:SF122 1 145 0.0 T 22-04-2016 YE2696 f1118f248a62cb2db4b135def0c7b9bf 890 PANTHER PTHR11638:SF122 173 890 0.0 T 22-04-2016 YE2696 f1118f248a62cb2db4b135def0c7b9bf 890 Gene3D G3DSA:1.10.8.60 373 456 2.9E-30 T 22-04-2016 YE2696 f1118f248a62cb2db4b135def0c7b9bf 890 SMART SM00382 227 368 1.9E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain YE2696 f1118f248a62cb2db4b135def0c7b9bf 890 SMART SM00382 618 769 4.8E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YE2696 f1118f248a62cb2db4b135def0c7b9bf 890 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 729 743 1.1E-31 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YE2696 f1118f248a62cb2db4b135def0c7b9bf 890 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 696 714 1.1E-31 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YE2696 f1118f248a62cb2db4b135def0c7b9bf 890 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 622 640 1.1E-31 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YE2696 f1118f248a62cb2db4b135def0c7b9bf 890 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 667 685 1.1E-31 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 YE2696 f1118f248a62cb2db4b135def0c7b9bf 890 SMART SM01086 790 881 7.7E-13 T 22-04-2016 IPR019489 Clp ATPase, C-terminal YE2696 f1118f248a62cb2db4b135def0c7b9bf 890 SUPERFAMILY SSF52540 190 525 3.11E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2696 f1118f248a62cb2db4b135def0c7b9bf 890 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 12 861 0.0 T 22-04-2016 IPR017729 Type VI secretion system, ATPase ClpV1 YE2696 f1118f248a62cb2db4b135def0c7b9bf 890 Gene3D G3DSA:3.40.50.300 572 801 1.2E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2696 f1118f248a62cb2db4b135def0c7b9bf 890 PANTHER PTHR11638 1 145 0.0 T 22-04-2016 YE2696 f1118f248a62cb2db4b135def0c7b9bf 890 PANTHER PTHR11638 173 890 0.0 T 22-04-2016 YE2696 f1118f248a62cb2db4b135def0c7b9bf 890 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 323 335 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 YE2696 f1118f248a62cb2db4b135def0c7b9bf 890 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 790 862 1.5E-14 T 22-04-2016 IPR019489 Clp ATPase, C-terminal YE2696 f1118f248a62cb2db4b135def0c7b9bf 890 Gene3D G3DSA:1.10.8.60 802 883 4.2E-13 T 22-04-2016 YE2696 f1118f248a62cb2db4b135def0c7b9bf 890 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 232 363 9.5E-10 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 YE2696 f1118f248a62cb2db4b135def0c7b9bf 890 Gene3D G3DSA:3.40.50.300 189 371 4.6E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2904 11c23b089b4a7d0bae349603b1af5a0f 215 Pfam PF13500 AAA domain 2 189 2.1E-25 T 22-04-2016 YE2904 11c23b089b4a7d0bae349603b1af5a0f 215 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 191 20.596 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 YE2904 11c23b089b4a7d0bae349603b1af5a0f 215 PANTHER PTHR21343:SF13 1 205 5.9E-97 T 22-04-2016 YE2904 11c23b089b4a7d0bae349603b1af5a0f 215 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 2 154 4.6E-47 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 YE2904 11c23b089b4a7d0bae349603b1af5a0f 215 PIRSF PIRSF006755 1 206 1.5E-67 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 YE2904 11c23b089b4a7d0bae349603b1af5a0f 215 SUPERFAMILY SSF52540 1 192 5.11E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2904 11c23b089b4a7d0bae349603b1af5a0f 215 PANTHER PTHR21343 1 205 5.9E-97 T 22-04-2016 YE2904 11c23b089b4a7d0bae349603b1af5a0f 215 Gene3D G3DSA:3.40.50.300 1 190 4.3E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3733 0facd7713ee1e82ba2306932356159b8 778 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 505 1.1E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE3733 0facd7713ee1e82ba2306932356159b8 778 SMART SM00073 675 772 4.6E-18 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YE3733 0facd7713ee1e82ba2306932356159b8 778 SMART SM00388 282 347 4.8E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE3733 0facd7713ee1e82ba2306932356159b8 778 SUPERFAMILY SSF55874 336 505 1.7E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE3733 0facd7713ee1e82ba2306932356159b8 778 PANTHER PTHR24423 4 95 0.0 T 22-04-2016 YE3733 0facd7713ee1e82ba2306932356159b8 778 PANTHER PTHR24423 153 677 0.0 T 22-04-2016 YE3733 0facd7713ee1e82ba2306932356159b8 778 PANTHER PTHR24423:SF476 4 95 0.0 T 22-04-2016 YE3733 0facd7713ee1e82ba2306932356159b8 778 PANTHER PTHR24423:SF476 153 677 0.0 T 22-04-2016 YE3733 0facd7713ee1e82ba2306932356159b8 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 459 4.3E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE3733 0facd7713ee1e82ba2306932356159b8 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 485 4.3E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE3733 0facd7713ee1e82ba2306932356159b8 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 491 504 4.3E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE3733 0facd7713ee1e82ba2306932356159b8 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 445 4.3E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE3733 0facd7713ee1e82ba2306932356159b8 778 Gene3D G3DSA:1.20.120.160 676 775 1.4E-36 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YE3733 0facd7713ee1e82ba2306932356159b8 778 SMART SM00387 394 507 2.4E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE3733 0facd7713ee1e82ba2306932356159b8 778 SMART SM00448 525 638 1.3E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE3733 0facd7713ee1e82ba2306932356159b8 778 Gene3D G3DSA:3.30.565.10 333 505 1.5E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE3733 0facd7713ee1e82ba2306932356159b8 778 Gene3D G3DSA:3.30.450.20 143 267 4.3E-21 T 22-04-2016 YE3733 0facd7713ee1e82ba2306932356159b8 778 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 153 276 1.0E-15 T 22-04-2016 IPR000014 PAS domain YE3733 0facd7713ee1e82ba2306932356159b8 778 Pfam PF01627 Hpt domain 686 763 4.2E-14 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YE3733 0facd7713ee1e82ba2306932356159b8 778 SUPERFAMILY SSF47226 661 773 3.01E-31 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YE3733 0facd7713ee1e82ba2306932356159b8 778 SUPERFAMILY SSF55785 143 267 1.92E-21 T 22-04-2016 IPR000014 PAS domain YE3733 0facd7713ee1e82ba2306932356159b8 778 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 345 6.1E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE3733 0facd7713ee1e82ba2306932356159b8 778 Pfam PF00989 PAS fold 157 266 2.5E-17 T 22-04-2016 IPR013767 PAS fold GO:0006355 YE3733 0facd7713ee1e82ba2306932356159b8 778 Gene3D G3DSA:3.40.50.2300 523 654 3.5E-33 T 22-04-2016 YE3733 0facd7713ee1e82ba2306932356159b8 778 SUPERFAMILY SSF47384 269 347 9.61E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE3733 0facd7713ee1e82ba2306932356159b8 778 SMART SM00091 155 221 4.9E-8 T 22-04-2016 IPR000014 PAS domain YE3733 0facd7713ee1e82ba2306932356159b8 778 SUPERFAMILY SSF52172 525 655 1.57E-30 T 22-04-2016 IPR011006 CheY-like superfamily YE3733 0facd7713ee1e82ba2306932356159b8 778 Pfam PF00072 Response regulator receiver domain 527 638 8.9E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE3733 0facd7713ee1e82ba2306932356159b8 778 Gene3D G3DSA:1.10.287.130 274 332 3.3E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE3733 0facd7713ee1e82ba2306932356159b8 778 Gene3D G3DSA:1.10.287.970 1 89 3.3E-39 T 22-04-2016 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain YE3733 0facd7713ee1e82ba2306932356159b8 778 PIRSF PIRSF003182 1 778 0.0 T 22-04-2016 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 YE1169 db775d0876439fb4e8100dbf41ca739b 141 SUPERFAMILY SSF55729 1 130 2.38E-28 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE1169 db775d0876439fb4e8100dbf41ca739b 141 Pfam PF00583 Acetyltransferase (GNAT) family 49 124 1.4E-13 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YE1169 db775d0876439fb4e8100dbf41ca739b 141 PANTHER PTHR23091:SF274 1 129 2.5E-24 T 22-04-2016 YE1169 db775d0876439fb4e8100dbf41ca739b 141 Gene3D G3DSA:3.40.630.30 1 121 8.4E-31 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE1169 db775d0876439fb4e8100dbf41ca739b 141 Hamap MF_01127 Acetyltransferase YpeA [ypeA]. 1 141 55.003 T 22-04-2016 IPR023072 Acetyltransferase, YpeA GO:0016747 YE1169 db775d0876439fb4e8100dbf41ca739b 141 PANTHER PTHR23091 1 129 2.5E-24 T 22-04-2016 YE2690 edeb7dd2d708c2c48f87b1d15d758257 475 PANTHER PTHR35565:SF3 1 474 0.0 T 22-04-2016 YE2690 edeb7dd2d708c2c48f87b1d15d758257 475 PANTHER PTHR35565 1 474 0.0 T 22-04-2016 YE2690 edeb7dd2d708c2c48f87b1d15d758257 475 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 44 469 3.8E-190 T 22-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath YE2690 edeb7dd2d708c2c48f87b1d15d758257 475 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 2 469 4.5E-216 T 22-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath YE0798 0569dcdea8b44c82952ef6598a155509 239 PANTHER PTHR24322 147 178 3.7E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE0798 0569dcdea8b44c82952ef6598a155509 239 PANTHER PTHR24322 3 131 3.7E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE0798 0569dcdea8b44c82952ef6598a155509 239 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1 182 3.8E-5 T 22-04-2016 YE0798 0569dcdea8b44c82952ef6598a155509 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 8.2E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE0798 0569dcdea8b44c82952ef6598a155509 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 8.2E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE0798 0569dcdea8b44c82952ef6598a155509 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 8.2E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE0798 0569dcdea8b44c82952ef6598a155509 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 7.9E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE0798 0569dcdea8b44c82952ef6598a155509 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 7.9E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE0798 0569dcdea8b44c82952ef6598a155509 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 7.9E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE0798 0569dcdea8b44c82952ef6598a155509 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 7.9E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE0798 0569dcdea8b44c82952ef6598a155509 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 7.9E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE0798 0569dcdea8b44c82952ef6598a155509 239 Gene3D G3DSA:3.40.50.720 1 239 3.1E-72 T 22-04-2016 IPR016040 NAD(P)-binding domain YE0798 0569dcdea8b44c82952ef6598a155509 239 PANTHER PTHR24322:SF513 147 178 3.7E-41 T 22-04-2016 YE0798 0569dcdea8b44c82952ef6598a155509 239 PANTHER PTHR24322:SF513 3 131 3.7E-41 T 22-04-2016 YE0798 0569dcdea8b44c82952ef6598a155509 239 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YE0798 0569dcdea8b44c82952ef6598a155509 239 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 7 238 4.8E-55 T 22-04-2016 YE0798 0569dcdea8b44c82952ef6598a155509 239 SUPERFAMILY SSF51735 1 239 2.57E-71 T 22-04-2016 IPR016040 NAD(P)-binding domain YE0141 c23b3ed95064b4808b5ac180796b26dc 318 Gene3D G3DSA:3.40.50.2300 141 309 6.8E-47 T 22-04-2016 YE0141 c23b3ed95064b4808b5ac180796b26dc 318 Gene3D G3DSA:3.40.50.2300 26 140 9.8E-27 T 22-04-2016 YE0141 c23b3ed95064b4808b5ac180796b26dc 318 Pfam PF13407 Periplasmic binding protein domain 28 275 2.3E-44 T 22-04-2016 IPR025997 Periplasmic binding protein YE0141 c23b3ed95064b4808b5ac180796b26dc 318 PANTHER PTHR32196 1 281 8.9E-168 T 22-04-2016 YE0141 c23b3ed95064b4808b5ac180796b26dc 318 SUPERFAMILY SSF53822 23 310 3.37E-72 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YE0141 c23b3ed95064b4808b5ac180796b26dc 318 PANTHER PTHR32196:SF20 1 281 8.9E-168 T 22-04-2016 YE3217 7b3cbfb967f22c83fdba01cc171ad6d4 209 PANTHER PTHR30586:SF1 2 209 6.9E-148 T 22-04-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 YE3217 7b3cbfb967f22c83fdba01cc171ad6d4 209 Pfam PF02508 Rnf-Nqr subunit, membrane protein 9 195 5.9E-63 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 YE3217 7b3cbfb967f22c83fdba01cc171ad6d4 209 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 4 206 5.2E-106 T 22-04-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 YE3217 7b3cbfb967f22c83fdba01cc171ad6d4 209 PIRSF PIRSF006102 3 209 5.7E-72 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 YE3217 7b3cbfb967f22c83fdba01cc171ad6d4 209 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 2 207 36.98 T 22-04-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 YE3217 7b3cbfb967f22c83fdba01cc171ad6d4 209 PANTHER PTHR30586 2 209 6.9E-148 T 22-04-2016 YE3679 3a47612f31d228ee8aacf30a0b09d274 119 Gene3D G3DSA:3.30.1130.10 1 115 1.1E-43 T 22-04-2016 YE3679 3a47612f31d228ee8aacf30a0b09d274 119 SUPERFAMILY SSF55620 1 115 1.67E-37 T 22-04-2016 YE3679 3a47612f31d228ee8aacf30a0b09d274 119 PANTHER PTHR20941 1 117 1.1E-37 T 22-04-2016 YE3679 3a47612f31d228ee8aacf30a0b09d274 119 Pfam PF02152 Dihydroneopterin aldolase 4 113 1.8E-32 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 YE3679 3a47612f31d228ee8aacf30a0b09d274 119 SMART SM00905 4 114 5.6E-48 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 YE3679 3a47612f31d228ee8aacf30a0b09d274 119 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 4 114 1.8E-28 T 22-04-2016 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 YE3679 3a47612f31d228ee8aacf30a0b09d274 119 TIGRFAM TIGR00526 folB_dom: FolB domain 1 117 9.0E-41 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 YE1946 47d367a29979f8a239b0c85ef8939131 196 SUPERFAMILY SSF55469 12 193 2.22E-40 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 YE1946 47d367a29979f8a239b0c85ef8939131 196 PANTHER PTHR23026 1 192 3.3E-88 T 22-04-2016 YE1946 47d367a29979f8a239b0c85ef8939131 196 Gene3D G3DSA:3.40.109.10 5 194 1.6E-39 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 YE1946 47d367a29979f8a239b0c85ef8939131 196 Hamap MF_01204 Probable malonic semialdehyde reductase RutE [rutE]. 2 196 46.407 T 22-04-2016 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE GO:0016491|GO:0055114 YE1946 47d367a29979f8a239b0c85ef8939131 196 Pfam PF00881 Nitroreductase family 18 174 3.4E-16 T 22-04-2016 IPR029479 Nitroreductase YE1946 47d367a29979f8a239b0c85ef8939131 196 PANTHER PTHR23026:SF110 1 192 3.3E-88 T 22-04-2016 YE1629 cbbe1ec82cfcc300a4b9e29c0575f2a0 193 Hamap MF_00528 Septum formation protein Maf [maf]. 3 191 28.051 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 YE1629 cbbe1ec82cfcc300a4b9e29c0575f2a0 193 Pfam PF02545 Maf-like protein 3 185 1.4E-42 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 YE1629 cbbe1ec82cfcc300a4b9e29c0575f2a0 193 PIRSF PIRSF006305 1 192 1.0E-38 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 YE1629 cbbe1ec82cfcc300a4b9e29c0575f2a0 193 Gene3D G3DSA:3.90.950.10 2 189 2.3E-54 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like YE1629 cbbe1ec82cfcc300a4b9e29c0575f2a0 193 PANTHER PTHR11746:SF102 120 190 2.2E-32 T 22-04-2016 YE1629 cbbe1ec82cfcc300a4b9e29c0575f2a0 193 SUPERFAMILY SSF52972 1 186 4.77E-57 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like YE1629 cbbe1ec82cfcc300a4b9e29c0575f2a0 193 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 184 2.1E-55 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 YE1629 cbbe1ec82cfcc300a4b9e29c0575f2a0 193 PANTHER PTHR11746 120 190 2.2E-32 T 22-04-2016 YE1077 aaa5937377f4b04b2aa4779ee490fc6d 494 PANTHER PTHR11649 1 463 2.9E-164 T 22-04-2016 YE1077 aaa5937377f4b04b2aa4779ee490fc6d 494 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 207 370 3.9E-21 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 YE1077 aaa5937377f4b04b2aa4779ee490fc6d 494 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 153 2.2E-20 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 YE1077 aaa5937377f4b04b2aa4779ee490fc6d 494 Hamap MF_00195 GTPase Der [der]. 2 465 38.696 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 YE1077 aaa5937377f4b04b2aa4779ee490fc6d 494 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 3.8E-9 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YE1077 aaa5937377f4b04b2aa4779ee490fc6d 494 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 3.8E-9 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YE1077 aaa5937377f4b04b2aa4779ee490fc6d 494 SUPERFAMILY SSF52540 4 174 4.79E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1077 aaa5937377f4b04b2aa4779ee490fc6d 494 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 382 462 2.0E-25 T 22-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like YE1077 aaa5937377f4b04b2aa4779ee490fc6d 494 SUPERFAMILY SSF52540 138 166 1.99E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1077 aaa5937377f4b04b2aa4779ee490fc6d 494 SUPERFAMILY SSF52540 204 468 1.99E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1077 aaa5937377f4b04b2aa4779ee490fc6d 494 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 462 2.5E-177 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 YE1077 aaa5937377f4b04b2aa4779ee490fc6d 494 PANTHER PTHR11649:SF5 1 463 2.9E-164 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 YE1077 aaa5937377f4b04b2aa4779ee490fc6d 494 Pfam PF01926 50S ribosome-binding GTPase 209 326 4.8E-24 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YE1077 aaa5937377f4b04b2aa4779ee490fc6d 494 Pfam PF01926 50S ribosome-binding GTPase 5 119 3.0E-27 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YE1077 aaa5937377f4b04b2aa4779ee490fc6d 494 Gene3D G3DSA:3.30.300.20 388 463 2.6E-22 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta YE1077 aaa5937377f4b04b2aa4779ee490fc6d 494 Gene3D G3DSA:3.40.50.300 205 387 4.3E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1077 aaa5937377f4b04b2aa4779ee490fc6d 494 Gene3D G3DSA:3.40.50.300 2 175 1.4E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1077 aaa5937377f4b04b2aa4779ee490fc6d 494 PIRSF PIRSF006485 1 470 9.9E-178 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 YE1071 8d459efd30a96a5ba98925f2c0ae1dc8 249 PANTHER PTHR23083 37 247 2.9E-17 T 22-04-2016 YE1071 8d459efd30a96a5ba98925f2c0ae1dc8 249 SMART SM00028 137 170 1.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 YE1071 8d459efd30a96a5ba98925f2c0ae1dc8 249 SMART SM00028 67 100 4.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 YE1071 8d459efd30a96a5ba98925f2c0ae1dc8 249 SMART SM00028 33 66 0.019 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 YE1071 8d459efd30a96a5ba98925f2c0ae1dc8 249 Pfam PF13432 Tetratricopeptide repeat 37 100 1.5E-5 T 22-04-2016 YE1071 8d459efd30a96a5ba98925f2c0ae1dc8 249 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 10 236 2.5E-81 T 22-04-2016 IPR013360 Pilus biogenesis/stability type IV, PilW YE1071 8d459efd30a96a5ba98925f2c0ae1dc8 249 SUPERFAMILY SSF48452 31 181 8.97E-18 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YE1071 8d459efd30a96a5ba98925f2c0ae1dc8 249 Gene3D G3DSA:1.25.40.10 34 246 9.0E-22 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YE3591 cc76a2165ea6cf92cb39b0d6ba4ba164 539 PANTHER PTHR10010 1 446 1.1E-37 T 22-04-2016 YE3591 cc76a2165ea6cf92cb39b0d6ba4ba164 539 Gene3D G3DSA:1.20.58.220 327 417 3.8E-6 T 22-04-2016 YE3591 cc76a2165ea6cf92cb39b0d6ba4ba164 539 TIGRFAM TIGR01013 2a58: sodium-dependent inorganic phosphate (Pi) transporter 67 520 6.0E-107 T 22-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 YE3591 cc76a2165ea6cf92cb39b0d6ba4ba164 539 Pfam PF01895 PhoU domain 340 421 1.1E-5 T 22-04-2016 IPR026022 PhoU domain YE3591 cc76a2165ea6cf92cb39b0d6ba4ba164 539 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 1 307 5.0E-102 T 22-04-2016 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 YE3591 cc76a2165ea6cf92cb39b0d6ba4ba164 539 SUPERFAMILY SSF109755 321 531 7.33E-24 T 22-04-2016 YE3591 cc76a2165ea6cf92cb39b0d6ba4ba164 539 Pfam PF02690 Na+/Pi-cotransporter 13 147 6.5E-34 T 22-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 YE3591 cc76a2165ea6cf92cb39b0d6ba4ba164 539 Pfam PF02690 Na+/Pi-cotransporter 158 259 1.6E-10 T 22-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 YE3591 cc76a2165ea6cf92cb39b0d6ba4ba164 539 PANTHER PTHR10010:SF26 1 446 1.1E-37 T 22-04-2016 YE0609 90cb60c6a44e727d54548c0ae6c3c666 635 PANTHER PTHR19375 2 635 0.0 T 22-04-2016 YE0609 90cb60c6a44e727d54548c0ae6c3c666 635 Gene3D G3DSA:3.30.30.30 53 107 2.9E-27 T 22-04-2016 YE0609 90cb60c6a44e727d54548c0ae6c3c666 635 SUPERFAMILY SSF100920 384 540 1.96E-61 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain YE0609 90cb60c6a44e727d54548c0ae6c3c666 635 Gene3D G3DSA:1.20.1270.10 532 601 3.5E-27 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain YE0609 90cb60c6a44e727d54548c0ae6c3c666 635 SUPERFAMILY SSF100934 535 608 2.04E-7 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain YE0609 90cb60c6a44e727d54548c0ae6c3c666 635 Pfam PF00012 Hsp70 protein 4 602 3.7E-265 T 22-04-2016 IPR013126 Heat shock protein 70 family YE0609 90cb60c6a44e727d54548c0ae6c3c666 635 Gene3D G3DSA:3.30.420.40 119 196 1.1E-63 T 22-04-2016 YE0609 90cb60c6a44e727d54548c0ae6c3c666 635 Gene3D G3DSA:3.30.420.40 4 52 1.1E-63 T 22-04-2016 YE0609 90cb60c6a44e727d54548c0ae6c3c666 635 PANTHER PTHR19375:SF173 2 635 0.0 T 22-04-2016 YE0609 90cb60c6a44e727d54548c0ae6c3c666 635 PRINTS PR00301 70kDa heat shock protein signature 469 485 2.9E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family YE0609 90cb60c6a44e727d54548c0ae6c3c666 635 PRINTS PR00301 70kDa heat shock protein signature 365 385 2.9E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family YE0609 90cb60c6a44e727d54548c0ae6c3c666 635 PRINTS PR00301 70kDa heat shock protein signature 198 208 2.9E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family YE0609 90cb60c6a44e727d54548c0ae6c3c666 635 PRINTS PR00301 70kDa heat shock protein signature 31 43 2.9E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family YE0609 90cb60c6a44e727d54548c0ae6c3c666 635 PRINTS PR00301 70kDa heat shock protein signature 3 16 2.9E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family YE0609 90cb60c6a44e727d54548c0ae6c3c666 635 PRINTS PR00301 70kDa heat shock protein signature 54 62 2.9E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family YE0609 90cb60c6a44e727d54548c0ae6c3c666 635 PRINTS PR00301 70kDa heat shock protein signature 388 407 2.9E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family YE0609 90cb60c6a44e727d54548c0ae6c3c666 635 PRINTS PR00301 70kDa heat shock protein signature 138 158 2.9E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family YE0609 90cb60c6a44e727d54548c0ae6c3c666 635 PRINTS PR00301 70kDa heat shock protein signature 334 350 2.9E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family YE0609 90cb60c6a44e727d54548c0ae6c3c666 635 SUPERFAMILY SSF53067 4 183 1.3E-65 T 22-04-2016 YE0609 90cb60c6a44e727d54548c0ae6c3c666 635 Gene3D G3DSA:3.90.640.10 230 315 6.3E-32 T 22-04-2016 YE0609 90cb60c6a44e727d54548c0ae6c3c666 635 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 631 36.919 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 YE0609 90cb60c6a44e727d54548c0ae6c3c666 635 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site YE0609 90cb60c6a44e727d54548c0ae6c3c666 635 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 2.4E-291 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 YE0609 90cb60c6a44e727d54548c0ae6c3c666 635 Gene3D G3DSA:3.30.420.40 319 361 2.8E-33 T 22-04-2016 YE0609 90cb60c6a44e727d54548c0ae6c3c666 635 Gene3D G3DSA:3.30.420.40 197 229 2.8E-33 T 22-04-2016 YE0609 90cb60c6a44e727d54548c0ae6c3c666 635 Gene3D G3DSA:2.60.34.10 390 531 7.3E-71 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain YE0609 90cb60c6a44e727d54548c0ae6c3c666 635 SUPERFAMILY SSF53067 187 382 8.43E-68 T 22-04-2016 YE0609 90cb60c6a44e727d54548c0ae6c3c666 635 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site YE0609 90cb60c6a44e727d54548c0ae6c3c666 635 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site YE2725 da4348e2f2cddd983e1c365562b1b6de 467 SUPERFAMILY SSF52540 8 202 2.1E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2725 da4348e2f2cddd983e1c365562b1b6de 467 PANTHER PTHR21343 7 247 3.7E-176 T 22-04-2016 YE2725 da4348e2f2cddd983e1c365562b1b6de 467 PANTHER PTHR21343 263 466 3.7E-176 T 22-04-2016 YE2725 da4348e2f2cddd983e1c365562b1b6de 467 TIGRFAM TIGR00379 cobB: cobyrinic acid a,c-diamide synthase 10 453 1.2E-133 T 22-04-2016 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 YE2725 da4348e2f2cddd983e1c365562b1b6de 467 Gene3D G3DSA:3.40.50.880 268 464 9.3E-24 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YE2725 da4348e2f2cddd983e1c365562b1b6de 467 PANTHER PTHR21343:SF6 7 247 3.7E-176 T 22-04-2016 YE2725 da4348e2f2cddd983e1c365562b1b6de 467 PANTHER PTHR21343:SF6 263 466 3.7E-176 T 22-04-2016 YE2725 da4348e2f2cddd983e1c365562b1b6de 467 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 10 198 1.4E-27 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain YE2725 da4348e2f2cddd983e1c365562b1b6de 467 SUPERFAMILY SSF52317 268 460 1.1E-28 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YE2725 da4348e2f2cddd983e1c365562b1b6de 467 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 262 452 7.2E-40 T 22-04-2016 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 UniPathway: UPA00148 YE2725 da4348e2f2cddd983e1c365562b1b6de 467 Gene3D G3DSA:3.40.50.300 7 198 8.8E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2725 da4348e2f2cddd983e1c365562b1b6de 467 Hamap MF_00027 Cobyrinate a,c-diamide synthase [cbiA]. 6 453 42.839 T 22-04-2016 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 YE3775 3a0d518ede29ea1650d21b8e16d281ef 315 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE3775 3a0d518ede29ea1650d21b8e16d281ef 315 TIGRFAM TIGR02405 trehalos_R_Ecol: trehalose operon repressor 4 313 4.4E-154 T 22-04-2016 IPR012771 Trehalose operon repressor GO:0003677|GO:0005991|GO:0045892 YE3775 3a0d518ede29ea1650d21b8e16d281ef 315 SMART SM00354 4 74 9.9E-33 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE3775 3a0d518ede29ea1650d21b8e16d281ef 315 Pfam PF13377 Periplasmic binding protein-like domain 168 312 6.4E-16 T 22-04-2016 YE3775 3a0d518ede29ea1650d21b8e16d281ef 315 SUPERFAMILY SSF53822 63 314 5.89E-63 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YE3775 3a0d518ede29ea1650d21b8e16d281ef 315 PANTHER PTHR30146:SF42 4 314 3.0E-208 T 22-04-2016 YE3775 3a0d518ede29ea1650d21b8e16d281ef 315 Gene3D G3DSA:3.40.50.2300 175 276 7.7E-37 T 22-04-2016 YE3775 3a0d518ede29ea1650d21b8e16d281ef 315 Gene3D G3DSA:1.10.260.40 6 56 1.6E-23 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE3775 3a0d518ede29ea1650d21b8e16d281ef 315 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 3.6E-20 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE3775 3a0d518ede29ea1650d21b8e16d281ef 315 Gene3D G3DSA:3.40.50.2300 57 174 1.1E-21 T 22-04-2016 YE3775 3a0d518ede29ea1650d21b8e16d281ef 315 SUPERFAMILY SSF47413 3 60 1.24E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE3775 3a0d518ede29ea1650d21b8e16d281ef 315 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 6 16 6.2E-6 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE3775 3a0d518ede29ea1650d21b8e16d281ef 315 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 16 26 6.2E-6 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE3775 3a0d518ede29ea1650d21b8e16d281ef 315 PANTHER PTHR30146 4 314 3.0E-208 T 22-04-2016 YE0674 8f723641fb6a0e860df161a1d03c9c36 306 SUPERFAMILY SSF52440 3 96 4.22E-29 T 22-04-2016 IPR016185 Pre-ATP-grasp domain YE0674 8f723641fb6a0e860df161a1d03c9c36 306 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 63 74 - T 22-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YE0674 8f723641fb6a0e860df161a1d03c9c36 306 PANTHER PTHR23132:SF0 1 305 2.8E-97 T 22-04-2016 YE0674 8f723641fb6a0e860df161a1d03c9c36 306 Pfam PF01820 D-ala D-ala ligase N-terminus 4 86 4.0E-20 T 22-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YE0674 8f723641fb6a0e860df161a1d03c9c36 306 Gene3D G3DSA:3.30.1490.20 108 180 3.0E-25 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 YE0674 8f723641fb6a0e860df161a1d03c9c36 306 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 248 276 - T 22-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YE0674 8f723641fb6a0e860df161a1d03c9c36 306 PANTHER PTHR23132 1 305 2.8E-97 T 22-04-2016 YE0674 8f723641fb6a0e860df161a1d03c9c36 306 Gene3D G3DSA:3.30.470.20 85 103 1.2E-51 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 YE0674 8f723641fb6a0e860df161a1d03c9c36 306 Gene3D G3DSA:3.30.470.20 181 305 1.2E-51 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 YE0674 8f723641fb6a0e860df161a1d03c9c36 306 Pfam PF07478 D-ala D-ala ligase C-terminus 103 302 7.8E-69 T 22-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YE0674 8f723641fb6a0e860df161a1d03c9c36 306 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 4 305 2.0E-109 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YE0674 8f723641fb6a0e860df161a1d03c9c36 306 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 3 306 36.806 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YE0674 8f723641fb6a0e860df161a1d03c9c36 306 PIRSF PIRSF039102 41 306 6.5E-95 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YE0674 8f723641fb6a0e860df161a1d03c9c36 306 Gene3D G3DSA:3.40.50.20 3 84 2.1E-27 T 22-04-2016 IPR016185 Pre-ATP-grasp domain YE0674 8f723641fb6a0e860df161a1d03c9c36 306 SUPERFAMILY SSF56059 97 302 2.69E-59 T 22-04-2016 YE1634 7693fdfcbe3120a1c0d12ff26d527ee3 309 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 5.4E-129 T 22-04-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 YE1634 7693fdfcbe3120a1c0d12ff26d527ee3 309 PIRSF PIRSF000446 1 309 3.1E-138 T 22-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 YE1634 7693fdfcbe3120a1c0d12ff26d527ee3 309 PANTHER PTHR10982 1 309 3.4E-164 T 22-04-2016 YE1634 7693fdfcbe3120a1c0d12ff26d527ee3 309 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 307 4.6E-40 T 22-04-2016 IPR020801 Polyketide synthase, acyl transferase domain YE1634 7693fdfcbe3120a1c0d12ff26d527ee3 309 Pfam PF00698 Acyl transferase domain 7 291 8.0E-36 T 22-04-2016 IPR014043 Acyl transferase YE1634 7693fdfcbe3120a1c0d12ff26d527ee3 309 Gene3D G3DSA:3.30.70.250 125 196 3.5E-30 T 22-04-2016 YE1634 7693fdfcbe3120a1c0d12ff26d527ee3 309 Gene3D G3DSA:3.40.366.10 2 122 2.1E-70 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 YE1634 7693fdfcbe3120a1c0d12ff26d527ee3 309 Gene3D G3DSA:3.40.366.10 197 299 2.1E-70 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 YE1634 7693fdfcbe3120a1c0d12ff26d527ee3 309 SUPERFAMILY SSF55048 128 197 1.07E-17 T 22-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 YE1634 7693fdfcbe3120a1c0d12ff26d527ee3 309 SUPERFAMILY SSF52151 190 307 1.46E-80 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 YE1634 7693fdfcbe3120a1c0d12ff26d527ee3 309 SUPERFAMILY SSF52151 4 122 1.46E-80 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 YE1983 4ca8020081e7cfec5e7d3024d53e7a2c 773 SUPERFAMILY SSF50692 643 766 8.82E-19 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain YE1983 4ca8020081e7cfec5e7d3024d53e7a2c 773 Pfam PF01568 Molydopterin dinucleotide binding domain 650 757 1.1E-10 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 YE1983 4ca8020081e7cfec5e7d3024d53e7a2c 773 Gene3D G3DSA:3.40.228.10 183 394 1.7E-52 T 22-04-2016 YE1983 4ca8020081e7cfec5e7d3024d53e7a2c 773 SUPERFAMILY SSF53706 48 636 8.11E-144 T 22-04-2016 YE1983 4ca8020081e7cfec5e7d3024d53e7a2c 773 Gene3D G3DSA:2.40.40.20 645 767 1.9E-13 T 22-04-2016 YE1983 4ca8020081e7cfec5e7d3024d53e7a2c 773 PANTHER PTHR11615:SF114 36 252 1.7E-249 T 22-04-2016 YE1983 4ca8020081e7cfec5e7d3024d53e7a2c 773 PANTHER PTHR11615:SF114 271 763 1.7E-249 T 22-04-2016 YE1983 4ca8020081e7cfec5e7d3024d53e7a2c 773 Gene3D G3DSA:3.40.50.740 395 631 7.1E-58 T 22-04-2016 YE1983 4ca8020081e7cfec5e7d3024d53e7a2c 773 Gene3D G3DSA:3.40.50.740 109 182 7.1E-58 T 22-04-2016 YE1983 4ca8020081e7cfec5e7d3024d53e7a2c 773 PANTHER PTHR11615 36 252 1.7E-249 T 22-04-2016 YE1983 4ca8020081e7cfec5e7d3024d53e7a2c 773 PANTHER PTHR11615 271 763 1.7E-249 T 22-04-2016 YE1983 4ca8020081e7cfec5e7d3024d53e7a2c 773 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 14 762 3.0E-284 T 22-04-2016 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 YE1983 4ca8020081e7cfec5e7d3024d53e7a2c 773 Pfam PF00384 Molybdopterin oxidoreductase 109 498 1.7E-24 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 YE1983 4ca8020081e7cfec5e7d3024d53e7a2c 773 PIRSF PIRSF000144 1 768 0.0 T 22-04-2016 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 YE0097 51b4195dc9edc2d382a8a27f4347cf5e 394 SUPERFAMILY SSF103473 7 390 9.42E-58 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE0097 51b4195dc9edc2d382a8a27f4347cf5e 394 Gene3D G3DSA:1.20.1250.20 204 392 3.3E-5 T 22-04-2016 YE0097 51b4195dc9edc2d382a8a27f4347cf5e 394 Gene3D G3DSA:1.20.1250.20 9 192 8.8E-28 T 22-04-2016 YE0097 51b4195dc9edc2d382a8a27f4347cf5e 394 Pfam PF07690 Major Facilitator Superfamily 14 350 1.7E-38 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YE0097 51b4195dc9edc2d382a8a27f4347cf5e 394 PANTHER PTHR23502 1 387 1.6E-197 T 22-04-2016 YE0097 51b4195dc9edc2d382a8a27f4347cf5e 394 PANTHER PTHR23502:SF32 1 387 1.6E-197 T 22-04-2016 YE3863 55c725f0d06233fdba5b99da0c84b158 371 Gene3D G3DSA:3.40.50.300 4 234 5.5E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3863 55c725f0d06233fdba5b99da0c84b158 371 Gene3D G3DSA:2.40.50.100 239 289 8.4E-22 T 22-04-2016 YE3863 55c725f0d06233fdba5b99da0c84b158 371 Gene3D G3DSA:2.40.50.140 290 347 1.3E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE3863 55c725f0d06233fdba5b99da0c84b158 371 PANTHER PTHR24220 5 345 1.6E-191 T 22-04-2016 YE3863 55c725f0d06233fdba5b99da0c84b158 371 SUPERFAMILY SSF52540 4 243 3.96E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3863 55c725f0d06233fdba5b99da0c84b158 371 Pfam PF08402 TOBE domain 283 355 6.2E-11 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 YE3863 55c725f0d06233fdba5b99da0c84b158 371 Pfam PF00005 ABC transporter 20 161 1.2E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE3863 55c725f0d06233fdba5b99da0c84b158 371 SUPERFAMILY SSF50331 236 364 2.28E-31 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal YE3863 55c725f0d06233fdba5b99da0c84b158 371 SMART SM00382 28 211 7.4E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain YE3863 55c725f0d06233fdba5b99da0c84b158 371 PANTHER PTHR24220:SF572 5 345 1.6E-191 T 22-04-2016 YE3863 55c725f0d06233fdba5b99da0c84b158 371 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE3227 4665a22804727d8b557f9f701edfe2a1 597 Gene3D G3DSA:2.40.160.50 214 593 2.4E-44 T 22-04-2016 YE3227 4665a22804727d8b557f9f701edfe2a1 597 Pfam PF08479 POTRA domain, ShlB-type 88 167 3.8E-11 T 22-04-2016 IPR013686 Polypeptide-transport-associated, ShlB-type YE3227 4665a22804727d8b557f9f701edfe2a1 597 PANTHER PTHR34597:SF1 18 597 6.3E-188 T 22-04-2016 YE3227 4665a22804727d8b557f9f701edfe2a1 597 PANTHER PTHR34597 18 597 6.3E-188 T 22-04-2016 YE3227 4665a22804727d8b557f9f701edfe2a1 597 Gene3D G3DSA:3.10.20.310 83 167 2.6E-11 T 22-04-2016 YE3615 e507d64d7f38facda8e7ac40eae62bbf 524 PANTHER PTHR32089 190 519 4.8E-176 T 22-04-2016 YE3615 e507d64d7f38facda8e7ac40eae62bbf 524 PANTHER PTHR32089 145 170 4.8E-176 T 22-04-2016 YE3615 e507d64d7f38facda8e7ac40eae62bbf 524 SMART SM00283 269 516 3.0E-91 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 YE3615 e507d64d7f38facda8e7ac40eae62bbf 524 Pfam PF02203 Tar ligand binding domain homologue 3 169 3.7E-16 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 YE3615 e507d64d7f38facda8e7ac40eae62bbf 524 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 328 515 3.0E-63 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 YE3615 e507d64d7f38facda8e7ac40eae62bbf 524 SUPERFAMILY SSF58104 243 517 4.58E-73 T 22-04-2016 YE3615 e507d64d7f38facda8e7ac40eae62bbf 524 Gene3D G3DSA:1.10.287.950 284 488 2.0E-62 T 22-04-2016 YE3615 e507d64d7f38facda8e7ac40eae62bbf 524 PANTHER PTHR32089:SF48 145 170 4.8E-176 T 22-04-2016 YE3615 e507d64d7f38facda8e7ac40eae62bbf 524 SUPERFAMILY SSF47170 31 179 2.51E-5 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 YE3615 e507d64d7f38facda8e7ac40eae62bbf 524 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 4.3E-61 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE3615 e507d64d7f38facda8e7ac40eae62bbf 524 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 4 29 4.3E-61 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE3615 e507d64d7f38facda8e7ac40eae62bbf 524 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 394 4.3E-61 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE3615 e507d64d7f38facda8e7ac40eae62bbf 524 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 4.3E-61 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE3615 e507d64d7f38facda8e7ac40eae62bbf 524 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 4.3E-61 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE3615 e507d64d7f38facda8e7ac40eae62bbf 524 PANTHER PTHR32089:SF48 190 519 4.8E-176 T 22-04-2016 YE1321 bea927293a6bf6f5d5a39ef0f8f185c2 265 SMART SM00382 38 237 1.4E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain YE1321 bea927293a6bf6f5d5a39ef0f8f185c2 265 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE1321 bea927293a6bf6f5d5a39ef0f8f185c2 265 PANTHER PTHR24220:SF347 15 265 5.9E-186 T 22-04-2016 YE1321 bea927293a6bf6f5d5a39ef0f8f185c2 265 Gene3D G3DSA:3.40.50.300 14 260 4.8E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1321 bea927293a6bf6f5d5a39ef0f8f185c2 265 Pfam PF00005 ABC transporter 29 189 7.8E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE1321 bea927293a6bf6f5d5a39ef0f8f185c2 265 SUPERFAMILY SSF52540 14 259 8.99E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1321 bea927293a6bf6f5d5a39ef0f8f185c2 265 PANTHER PTHR24220 15 265 5.9E-186 T 22-04-2016 YE1321 bea927293a6bf6f5d5a39ef0f8f185c2 265 PIRSF PIRSF039085 10 265 1.8E-119 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 YE2473 fb83aef0c70ddf286b2efa68fafcaff5 593 PANTHER PTHR24421 85 585 9.2E-138 T 22-04-2016 YE2473 fb83aef0c70ddf286b2efa68fafcaff5 593 Pfam PF00672 HAMP domain 154 221 8.2E-15 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YE2473 fb83aef0c70ddf286b2efa68fafcaff5 593 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 499 586 4.3E-7 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE2473 fb83aef0c70ddf286b2efa68fafcaff5 593 PIRSF PIRSF003167 1 593 1.0E-197 T 22-04-2016 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 YE2473 fb83aef0c70ddf286b2efa68fafcaff5 593 Pfam PF07730 Histidine kinase 392 455 2.1E-17 T 22-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 YE2473 fb83aef0c70ddf286b2efa68fafcaff5 593 SUPERFAMILY SSF158472 173 221 5.1E-8 T 22-04-2016 YE2473 fb83aef0c70ddf286b2efa68fafcaff5 593 SUPERFAMILY SSF55874 463 585 1.04E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE2473 fb83aef0c70ddf286b2efa68fafcaff5 593 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 32 127 2.9E-7 T 22-04-2016 IPR029095 NarX-like, N-terminal YE2473 fb83aef0c70ddf286b2efa68fafcaff5 593 Gene3D G3DSA:3.30.565.10 457 586 4.3E-8 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE2473 fb83aef0c70ddf286b2efa68fafcaff5 593 PANTHER PTHR24421:SF12 85 585 9.2E-138 T 22-04-2016 YE2473 fb83aef0c70ddf286b2efa68fafcaff5 593 SMART SM00304 173 226 2.5E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YE2473 fb83aef0c70ddf286b2efa68fafcaff5 593 SMART SM00387 496 589 4.5E-5 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE3096 01d17253943c3167530a811154619825 51 Pfam PF10689 Protein of unknown function (DUF2496) 2 44 1.7E-22 T 22-04-2016 IPR019630 Protein of unknown function DUF2496, YbaM-related YE0080 6a1a95495a50273c49d0f33ccd527f99 156 PANTHER PTHR36918:SF1 6 156 5.3E-92 T 22-04-2016 YE0080 6a1a95495a50273c49d0f33ccd527f99 156 Pfam PF02556 Preprotein translocase subunit SecB 5 144 1.2E-57 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 YE0080 6a1a95495a50273c49d0f33ccd527f99 156 SUPERFAMILY SSF54611 2 141 1.0E-53 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 YE0080 6a1a95495a50273c49d0f33ccd527f99 156 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 13 30 8.4E-42 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 YE0080 6a1a95495a50273c49d0f33ccd527f99 156 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 73 93 8.4E-42 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 YE0080 6a1a95495a50273c49d0f33ccd527f99 156 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 123 141 8.4E-42 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 YE0080 6a1a95495a50273c49d0f33ccd527f99 156 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 97 119 8.4E-42 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 YE0080 6a1a95495a50273c49d0f33ccd527f99 156 Gene3D G3DSA:3.10.420.10 2 151 1.5E-64 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 YE0080 6a1a95495a50273c49d0f33ccd527f99 156 Hamap MF_00821 Protein-export protein SecB [secB]. 1 145 33.682 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 YE0080 6a1a95495a50273c49d0f33ccd527f99 156 PANTHER PTHR36918 6 156 5.3E-92 T 22-04-2016 YE0080 6a1a95495a50273c49d0f33ccd527f99 156 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 5 146 1.8E-69 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 YE0677 66a2d15348b9d318252c2776330b7d51 383 ProSitePatterns PS01134 FtsZ protein signature 1. 43 77 - T 22-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 YE0677 66a2d15348b9d318252c2776330b7d51 383 SMART SM00864 12 204 4.3E-112 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 YE0677 66a2d15348b9d318252c2776330b7d51 383 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 8 343 38.094 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 YE0677 66a2d15348b9d318252c2776330b7d51 383 PANTHER PTHR30314:SF3 1 381 1.1E-208 T 22-04-2016 YE0677 66a2d15348b9d318252c2776330b7d51 383 PRINTS PR00423 Cell division protein FtsZ signature 97 117 1.4E-51 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 YE0677 66a2d15348b9d318252c2776330b7d51 383 PRINTS PR00423 Cell division protein FtsZ signature 211 232 1.4E-51 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 YE0677 66a2d15348b9d318252c2776330b7d51 383 PRINTS PR00423 Cell division protein FtsZ signature 125 146 1.4E-51 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 YE0677 66a2d15348b9d318252c2776330b7d51 383 PRINTS PR00423 Cell division protein FtsZ signature 188 210 1.4E-51 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 YE0677 66a2d15348b9d318252c2776330b7d51 383 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 13 172 4.8E-42 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 YE0677 66a2d15348b9d318252c2776330b7d51 383 Gene3D G3DSA:3.40.50.1440 13 213 1.3E-93 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 YE0677 66a2d15348b9d318252c2776330b7d51 383 Pfam PF12327 FtsZ family, C-terminal domain 221 315 8.6E-37 T 22-04-2016 IPR024757 Cell division protein FtsZ, C-terminal YE0677 66a2d15348b9d318252c2776330b7d51 383 PANTHER PTHR30314 1 381 1.1E-208 T 22-04-2016 YE0677 66a2d15348b9d318252c2776330b7d51 383 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 337 8.0E-142 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 YE0677 66a2d15348b9d318252c2776330b7d51 383 SMART SM00865 206 324 8.3E-56 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain YE0677 66a2d15348b9d318252c2776330b7d51 383 SUPERFAMILY SSF55307 203 319 2.98E-42 T 22-04-2016 IPR008280 Tubulin/FtsZ, C-terminal YE0677 66a2d15348b9d318252c2776330b7d51 383 Gene3D G3DSA:3.30.1330.20 214 321 8.6E-47 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain YE0677 66a2d15348b9d318252c2776330b7d51 383 ProSitePatterns PS01135 FtsZ protein signature 2. 96 117 - T 22-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 YE0677 66a2d15348b9d318252c2776330b7d51 383 SUPERFAMILY SSF52490 12 207 1.3E-69 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 YE4118 aa670fbfb704d23ab6d226b7771f5eeb 397 PANTHER PTHR30146:SF24 8 325 6.8E-180 T 22-04-2016 YE4118 aa670fbfb704d23ab6d226b7771f5eeb 397 SUPERFAMILY SSF53822 10 304 1.93E-41 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YE4118 aa670fbfb704d23ab6d226b7771f5eeb 397 Gene3D G3DSA:3.40.50.2300 118 255 5.4E-24 T 22-04-2016 YE4118 aa670fbfb704d23ab6d226b7771f5eeb 397 Pfam PF13377 Periplasmic binding protein-like domain 113 282 9.5E-34 T 22-04-2016 YE4118 aa670fbfb704d23ab6d226b7771f5eeb 397 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 373 389 5.7E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YE4118 aa670fbfb704d23ab6d226b7771f5eeb 397 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 358 373 5.7E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YE4118 aa670fbfb704d23ab6d226b7771f5eeb 397 Gene3D G3DSA:3.40.50.2300 49 117 7.2E-5 T 22-04-2016 YE4118 aa670fbfb704d23ab6d226b7771f5eeb 397 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 343 385 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 YE4118 aa670fbfb704d23ab6d226b7771f5eeb 397 SMART SM00342 306 389 2.8E-27 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YE4118 aa670fbfb704d23ab6d226b7771f5eeb 397 Pfam PF12833 Helix-turn-helix domain 314 389 2.0E-16 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YE4118 aa670fbfb704d23ab6d226b7771f5eeb 397 SUPERFAMILY SSF46689 289 337 9.54E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE4118 aa670fbfb704d23ab6d226b7771f5eeb 397 Gene3D G3DSA:1.10.10.60 288 339 1.2E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE4118 aa670fbfb704d23ab6d226b7771f5eeb 397 PANTHER PTHR30146 8 325 6.8E-180 T 22-04-2016 YE4118 aa670fbfb704d23ab6d226b7771f5eeb 397 SUPERFAMILY SSF46689 343 392 3.94E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE4118 aa670fbfb704d23ab6d226b7771f5eeb 397 Gene3D G3DSA:1.10.10.60 343 392 3.4E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE0968 615872a84e80a2336554c0a7e1ccb0ee 453 PANTHER PTHR33989 1 452 8.1E-205 T 22-04-2016 YE0968 615872a84e80a2336554c0a7e1ccb0ee 453 PIRSF PIRSF006351 1 447 1.1E-125 T 22-04-2016 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 YE0968 615872a84e80a2336554c0a7e1ccb0ee 453 Pfam PF02378 Phosphotransferase system, EIIC 30 363 1.2E-43 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 YE0968 615872a84e80a2336554c0a7e1ccb0ee 453 PANTHER PTHR33989:SF4 1 452 8.1E-205 T 22-04-2016 YE0968 615872a84e80a2336554c0a7e1ccb0ee 453 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 12 440 7.3E-155 T 22-04-2016 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 YE0968 615872a84e80a2336554c0a7e1ccb0ee 453 TIGRFAM TIGR00359 cello_pts_IIC: PTS system, cellobiose-specific IIC component 12 440 7.3E-155 T 22-04-2016 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 YE1104 e9097722d3da982730edb1fc5f004ec4 239 PANTHER PTHR26402:SF530 12 235 5.9E-130 T 22-04-2016 YE1104 e9097722d3da982730edb1fc5f004ec4 239 SMART SM00448 12 122 2.5E-39 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE1104 e9097722d3da982730edb1fc5f004ec4 239 Gene3D G3DSA:3.40.50.2300 12 134 9.0E-39 T 22-04-2016 YE1104 e9097722d3da982730edb1fc5f004ec4 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 230 3.3E-23 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YE1104 e9097722d3da982730edb1fc5f004ec4 239 SUPERFAMILY SSF52172 12 189 3.81E-40 T 22-04-2016 IPR011006 CheY-like superfamily YE1104 e9097722d3da982730edb1fc5f004ec4 239 Gene3D G3DSA:1.10.10.10 135 234 4.1E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1104 e9097722d3da982730edb1fc5f004ec4 239 PANTHER PTHR26402 12 235 5.9E-130 T 22-04-2016 YE1104 e9097722d3da982730edb1fc5f004ec4 239 Pfam PF00072 Response regulator receiver domain 14 122 1.7E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE1104 e9097722d3da982730edb1fc5f004ec4 239 SMART SM00862 155 231 8.3E-26 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YE2020 aea5f0d23009309b89fd50de5dd98323 129 Pfam PF13396 Phospholipase_D-nuclease N-terminal 24 67 4.2E-6 T 22-04-2016 IPR027379 Cardiolipin synthase N-terminal YE2020 aea5f0d23009309b89fd50de5dd98323 129 Pfam PF09851 Short C-terminal domain 101 128 3.5E-6 T 22-04-2016 IPR018649 SHOCT domain YE2118 8f1799669adeb058e4c4549e9137dda2 465 PIRSF PIRSF019381 1 465 1.1E-219 T 22-04-2016 IPR007413 Protein of unknown function DUF463, YcjX-like protein YE2118 8f1799669adeb058e4c4549e9137dda2 465 SUPERFAMILY SSF52540 6 184 6.4E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2118 8f1799669adeb058e4c4549e9137dda2 465 Pfam PF04317 YcjX-like family, DUF463 20 464 6.0E-190 T 22-04-2016 IPR007413 Protein of unknown function DUF463, YcjX-like protein YE2118 8f1799669adeb058e4c4549e9137dda2 465 PANTHER PTHR38605 1 465 4.7E-264 T 22-04-2016 YE2118 8f1799669adeb058e4c4549e9137dda2 465 PANTHER PTHR38605:SF1 1 465 4.7E-264 T 22-04-2016 YE1027 11c97a20a7c548591d055e3b42a7a409 295 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 2 295 43.492 T 22-04-2016 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 YE1027 11c97a20a7c548591d055e3b42a7a409 295 PANTHER PTHR10088 1 295 1.2E-198 T 22-04-2016 YE1027 11c97a20a7c548591d055e3b42a7a409 295 SUPERFAMILY SSF53697 4 248 2.67E-73 T 22-04-2016 YE1027 11c97a20a7c548591d055e3b42a7a409 295 Gene3D G3DSA:3.40.50.10490 4 249 4.5E-91 T 22-04-2016 YE1027 11c97a20a7c548591d055e3b42a7a409 295 PANTHER PTHR10088:SF5 1 295 1.2E-198 T 22-04-2016 YE1027 11c97a20a7c548591d055e3b42a7a409 295 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 185 202 - T 22-04-2016 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 YE1027 11c97a20a7c548591d055e3b42a7a409 295 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 6 295 2.0E-126 T 22-04-2016 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 YE1027 11c97a20a7c548591d055e3b42a7a409 295 Pfam PF01380 SIS domain 129 208 2.9E-9 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 YE2711 875b8008de9b5fd6434152fcbb595bcf 512 PANTHER PTHR21343 1 503 2.9E-220 T 22-04-2016 YE2711 875b8008de9b5fd6434152fcbb595bcf 512 Gene3D G3DSA:3.40.50.880 252 463 5.2E-31 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YE2711 875b8008de9b5fd6434152fcbb595bcf 512 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 253 450 3.7E-58 T 22-04-2016 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 UniPathway: UPA00148 YE2711 875b8008de9b5fd6434152fcbb595bcf 512 PANTHER PTHR21343:SF1 1 503 2.9E-220 T 22-04-2016 YE2711 875b8008de9b5fd6434152fcbb595bcf 512 Gene3D G3DSA:3.40.50.300 5 237 3.3E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2711 875b8008de9b5fd6434152fcbb595bcf 512 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 5 498 2.9E-160 T 22-04-2016 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 UniPathway: UPA00148 YE2711 875b8008de9b5fd6434152fcbb595bcf 512 SUPERFAMILY SSF52317 254 459 7.03E-35 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YE2711 875b8008de9b5fd6434152fcbb595bcf 512 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 506 188.035 T 22-04-2016 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 UniPathway: UPA00148 YE2711 875b8008de9b5fd6434152fcbb595bcf 512 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 229 6.8E-29 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain YE2711 875b8008de9b5fd6434152fcbb595bcf 512 SUPERFAMILY SSF52540 1 228 3.08E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1917 af3f495e7eee200b00eb0a538eb8b956 795 Gene3D G3DSA:3.30.56.10 1 38 1.4E-27 T 22-04-2016 YE1917 af3f495e7eee200b00eb0a538eb8b956 795 Gene3D G3DSA:3.30.56.10 155 183 1.4E-27 T 22-04-2016 YE1917 af3f495e7eee200b00eb0a538eb8b956 795 SUPERFAMILY SSF55681 467 690 4.03E-56 T 22-04-2016 YE1917 af3f495e7eee200b00eb0a538eb8b956 795 SUPERFAMILY SSF50249 35 196 1.03E-51 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE1917 af3f495e7eee200b00eb0a538eb8b956 795 Gene3D G3DSA:3.30.930.10 491 690 6.9E-68 T 22-04-2016 YE1917 af3f495e7eee200b00eb0a538eb8b956 795 Pfam PF03483 B3/4 domain 212 385 2.7E-71 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 YE1917 af3f495e7eee200b00eb0a538eb8b956 795 SUPERFAMILY SSF46955 403 475 1.56E-20 T 22-04-2016 IPR009061 Putative DNA-binding domain YE1917 af3f495e7eee200b00eb0a538eb8b956 795 Pfam PF03484 tRNA synthetase B5 domain 405 471 3.7E-20 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 YE1917 af3f495e7eee200b00eb0a538eb8b956 795 Pfam PF03147 Ferredoxin-fold anticodon binding domain 701 794 2.0E-28 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 YE1917 af3f495e7eee200b00eb0a538eb8b956 795 Gene3D G3DSA:2.40.50.140 42 154 2.6E-45 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE1917 af3f495e7eee200b00eb0a538eb8b956 795 SMART SM00873 212 385 1.8E-98 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 YE1917 af3f495e7eee200b00eb0a538eb8b956 795 Gene3D G3DSA:3.50.40.10 199 392 1.7E-85 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 YE1917 af3f495e7eee200b00eb0a538eb8b956 795 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 794 6.7E-292 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 YE1917 af3f495e7eee200b00eb0a538eb8b956 795 SUPERFAMILY SSF56037 198 396 5.23E-78 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 YE1917 af3f495e7eee200b00eb0a538eb8b956 795 SUPERFAMILY SSF54991 696 794 5.23E-30 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 YE1917 af3f495e7eee200b00eb0a538eb8b956 795 Gene3D G3DSA:3.30.70.380 703 794 5.0E-31 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 YE1917 af3f495e7eee200b00eb0a538eb8b956 795 Pfam PF01588 Putative tRNA binding domain 45 145 1.2E-26 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 YE1917 af3f495e7eee200b00eb0a538eb8b956 795 PANTHER PTHR10947:SF0 2 794 0.0 T 22-04-2016 YE1917 af3f495e7eee200b00eb0a538eb8b956 795 PANTHER PTHR10947 2 794 0.0 T 22-04-2016 YE1917 af3f495e7eee200b00eb0a538eb8b956 795 SMART SM00874 403 471 4.8E-31 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 YE1917 af3f495e7eee200b00eb0a538eb8b956 795 Gene3D G3DSA:3.30.56.20 402 475 3.3E-28 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 YE1917 af3f495e7eee200b00eb0a538eb8b956 795 SMART SM00896 701 794 1.1E-44 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 YE1917 af3f495e7eee200b00eb0a538eb8b956 795 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 788 48.582 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 YE2543 5bb83ce95fe37457834cbe58520fc5c5 156 Pfam PF03748 Flagellar basal body-associated protein FliL 54 154 1.7E-21 T 22-04-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 YE2543 5bb83ce95fe37457834cbe58520fc5c5 156 PANTHER PTHR35091 1 156 1.1E-58 T 22-04-2016 YE2543 5bb83ce95fe37457834cbe58520fc5c5 156 PANTHER PTHR35091:SF1 1 156 1.1E-58 T 22-04-2016 YE1862 c62bce2840933c895a3cb92ec0973d6d 474 PANTHER PTHR23501 18 469 6.0E-93 T 22-04-2016 YE1862 c62bce2840933c895a3cb92ec0973d6d 474 PRINTS PR01036 Tetracycline resistance protein TetB signature 115 135 3.0E-14 T 22-04-2016 YE1862 c62bce2840933c895a3cb92ec0973d6d 474 PRINTS PR01036 Tetracycline resistance protein TetB signature 24 48 3.0E-14 T 22-04-2016 YE1862 c62bce2840933c895a3cb92ec0973d6d 474 PRINTS PR01036 Tetracycline resistance protein TetB signature 408 427 3.0E-14 T 22-04-2016 YE1862 c62bce2840933c895a3cb92ec0973d6d 474 PRINTS PR01036 Tetracycline resistance protein TetB signature 270 295 3.0E-14 T 22-04-2016 YE1862 c62bce2840933c895a3cb92ec0973d6d 474 PRINTS PR01036 Tetracycline resistance protein TetB signature 145 169 3.0E-14 T 22-04-2016 YE1862 c62bce2840933c895a3cb92ec0973d6d 474 Gene3D G3DSA:1.20.1250.20 20 199 4.2E-28 T 22-04-2016 YE1862 c62bce2840933c895a3cb92ec0973d6d 474 Gene3D G3DSA:1.20.1250.20 273 470 9.2E-18 T 22-04-2016 YE1862 c62bce2840933c895a3cb92ec0973d6d 474 SUPERFAMILY SSF103473 256 469 1.29E-63 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE1862 c62bce2840933c895a3cb92ec0973d6d 474 SUPERFAMILY SSF103473 18 201 1.29E-63 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE1862 c62bce2840933c895a3cb92ec0973d6d 474 Pfam PF07690 Major Facilitator Superfamily 30 417 2.1E-50 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YE3660 e86bb6b6af3020207c253db6d225e7be 631 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 557 621 5.5E-24 T 22-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 YE3660 e86bb6b6af3020207c253db6d225e7be 631 SUPERFAMILY SSF54211 218 383 3.79E-46 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YE3660 e86bb6b6af3020207c253db6d225e7be 631 PANTHER PTHR10169:SF45 1 630 0.0 T 22-04-2016 YE3660 e86bb6b6af3020207c253db6d225e7be 631 Pfam PF01751 Toprim domain 414 523 2.7E-12 T 22-04-2016 IPR006171 Toprim domain YE3660 e86bb6b6af3020207c253db6d225e7be 631 Gene3D G3DSA:3.30.565.10 16 216 2.7E-77 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE3660 e86bb6b6af3020207c253db6d225e7be 631 PRINTS PR00418 DNA topoisomerase II family signature 518 530 6.8E-59 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YE3660 e86bb6b6af3020207c253db6d225e7be 631 PRINTS PR00418 DNA topoisomerase II family signature 110 124 6.8E-59 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YE3660 e86bb6b6af3020207c253db6d225e7be 631 PRINTS PR00418 DNA topoisomerase II family signature 67 80 6.8E-59 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YE3660 e86bb6b6af3020207c253db6d225e7be 631 PRINTS PR00418 DNA topoisomerase II family signature 267 280 6.8E-59 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YE3660 e86bb6b6af3020207c253db6d225e7be 631 PRINTS PR00418 DNA topoisomerase II family signature 561 577 6.8E-59 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YE3660 e86bb6b6af3020207c253db6d225e7be 631 PRINTS PR00418 DNA topoisomerase II family signature 480 496 6.8E-59 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YE3660 e86bb6b6af3020207c253db6d225e7be 631 PRINTS PR00418 DNA topoisomerase II family signature 32 47 6.8E-59 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YE3660 e86bb6b6af3020207c253db6d225e7be 631 PRINTS PR00418 DNA topoisomerase II family signature 415 429 6.8E-59 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YE3660 e86bb6b6af3020207c253db6d225e7be 631 PRINTS PR00418 DNA topoisomerase II family signature 498 515 6.8E-59 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YE3660 e86bb6b6af3020207c253db6d225e7be 631 SUPERFAMILY SSF55874 6 216 1.86E-69 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE3660 e86bb6b6af3020207c253db6d225e7be 631 Gene3D G3DSA:3.30.230.10 218 391 2.5E-47 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YE3660 e86bb6b6af3020207c253db6d225e7be 631 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 3 629 47.12 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YE3660 e86bb6b6af3020207c253db6d225e7be 631 Pfam PF00204 DNA gyrase B 219 385 1.5E-39 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 YE3660 e86bb6b6af3020207c253db6d225e7be 631 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 5 626 0.0 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YE3660 e86bb6b6af3020207c253db6d225e7be 631 Gene3D G3DSA:3.40.50.670 399 611 1.1E-75 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 YE3660 e86bb6b6af3020207c253db6d225e7be 631 PRINTS PR01098 Topoisomerase IV subunit B signature 312 327 5.3E-161 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YE3660 e86bb6b6af3020207c253db6d225e7be 631 PRINTS PR01098 Topoisomerase IV subunit B signature 239 262 5.3E-161 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YE3660 e86bb6b6af3020207c253db6d225e7be 631 PRINTS PR01098 Topoisomerase IV subunit B signature 449 470 5.3E-161 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YE3660 e86bb6b6af3020207c253db6d225e7be 631 PRINTS PR01098 Topoisomerase IV subunit B signature 363 388 5.3E-161 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YE3660 e86bb6b6af3020207c253db6d225e7be 631 PRINTS PR01098 Topoisomerase IV subunit B signature 193 214 5.3E-161 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YE3660 e86bb6b6af3020207c253db6d225e7be 631 PRINTS PR01098 Topoisomerase IV subunit B signature 175 192 5.3E-161 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YE3660 e86bb6b6af3020207c253db6d225e7be 631 PRINTS PR01098 Topoisomerase IV subunit B signature 136 150 5.3E-161 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YE3660 e86bb6b6af3020207c253db6d225e7be 631 PRINTS PR01098 Topoisomerase IV subunit B signature 295 311 5.3E-161 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YE3660 e86bb6b6af3020207c253db6d225e7be 631 PRINTS PR01098 Topoisomerase IV subunit B signature 150 165 5.3E-161 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YE3660 e86bb6b6af3020207c253db6d225e7be 631 PRINTS PR01098 Topoisomerase IV subunit B signature 27 40 5.3E-161 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YE3660 e86bb6b6af3020207c253db6d225e7be 631 PRINTS PR01098 Topoisomerase IV subunit B signature 339 362 5.3E-161 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YE3660 e86bb6b6af3020207c253db6d225e7be 631 PRINTS PR01098 Topoisomerase IV subunit B signature 504 520 5.3E-161 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YE3660 e86bb6b6af3020207c253db6d225e7be 631 PRINTS PR01098 Topoisomerase IV subunit B signature 538 560 5.3E-161 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YE3660 e86bb6b6af3020207c253db6d225e7be 631 PRINTS PR01098 Topoisomerase IV subunit B signature 583 597 5.3E-161 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YE3660 e86bb6b6af3020207c253db6d225e7be 631 PRINTS PR01098 Topoisomerase IV subunit B signature 470 482 5.3E-161 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YE3660 e86bb6b6af3020207c253db6d225e7be 631 SMART SM00433 35 625 8.1E-212 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YE3660 e86bb6b6af3020207c253db6d225e7be 631 PANTHER PTHR10169 1 630 0.0 T 22-04-2016 YE3660 e86bb6b6af3020207c253db6d225e7be 631 SUPERFAMILY SSF56719 389 622 9.68E-78 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 YE3660 e86bb6b6af3020207c253db6d225e7be 631 ProSitePatterns PS00177 DNA topoisomerase II signature. 417 425 - T 22-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 YE3660 e86bb6b6af3020207c253db6d225e7be 631 SMART SM00387 28 174 1.4E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE3660 e86bb6b6af3020207c253db6d225e7be 631 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 29 171 3.0E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE1044 1eb65a613bc19af87590f68c14ac433e 126 SUPERFAMILY SSF63520 19 115 7.98E-8 T 22-04-2016 IPR011608 PRD domain GO:0006355 YE1044 1eb65a613bc19af87590f68c14ac433e 126 Pfam PF00874 PRD domain 28 110 1.7E-5 T 22-04-2016 IPR011608 PRD domain GO:0006355 YE1044 1eb65a613bc19af87590f68c14ac433e 126 Gene3D G3DSA:1.10.1790.10 18 113 1.4E-6 T 22-04-2016 IPR011608 PRD domain GO:0006355 YE4169 7b557d4687aab329bed9284412601b42 269 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 264 4.8E-66 T 22-04-2016 IPR000150 Cof protein GO:0016787 YE4169 7b557d4687aab329bed9284412601b42 269 Gene3D G3DSA:3.30.1240.10 87 183 1.3E-39 T 22-04-2016 YE4169 7b557d4687aab329bed9284412601b42 269 SUPERFAMILY SSF56784 1 268 2.71E-77 T 22-04-2016 IPR023214 HAD-like domain YE4169 7b557d4687aab329bed9284412601b42 269 PANTHER PTHR10000 1 269 5.1E-157 T 22-04-2016 YE4169 7b557d4687aab329bed9284412601b42 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 264 9.8E-69 T 22-04-2016 IPR023214 HAD-like domain YE4169 7b557d4687aab329bed9284412601b42 269 Gene3D G3DSA:3.40.50.1000 1 76 1.2E-59 T 22-04-2016 IPR023214 HAD-like domain YE4169 7b557d4687aab329bed9284412601b42 269 Gene3D G3DSA:3.40.50.1000 184 269 1.2E-59 T 22-04-2016 IPR023214 HAD-like domain YE4169 7b557d4687aab329bed9284412601b42 269 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 22-04-2016 IPR000150 Cof protein GO:0016787 YE4169 7b557d4687aab329bed9284412601b42 269 PANTHER PTHR10000:SF29 1 269 5.1E-157 T 22-04-2016 YE4169 7b557d4687aab329bed9284412601b42 269 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 237 3.0E-28 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 YE1698 77c1b1d8593aff88584f3d00504e6c49 417 PANTHER PTHR11228 28 397 2.5E-39 T 22-04-2016 YE1698 77c1b1d8593aff88584f3d00504e6c49 417 SUPERFAMILY SSF102114 38 368 5.89E-29 T 22-04-2016 YE1698 77c1b1d8593aff88584f3d00504e6c49 417 Gene3D G3DSA:3.20.20.70 36 376 5.7E-30 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YE1698 77c1b1d8593aff88584f3d00504e6c49 417 Pfam PF04055 Radical SAM superfamily 42 191 2.5E-9 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 YE1698 77c1b1d8593aff88584f3d00504e6c49 417 Pfam PF13394 4Fe-4S single cluster domain 44 140 4.9E-6 T 22-04-2016 YE1698 77c1b1d8593aff88584f3d00504e6c49 417 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 42 53 - T 22-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 YE1698 77c1b1d8593aff88584f3d00504e6c49 417 TIGRFAM TIGR04496 rSAM_XyeB: radical SAM/SPASM domain peptide maturase, XyeB family 33 416 3.6E-237 T 22-04-2016 IPR030989 Radical SAM/SPASM domain peptide maturase, XyeB family YE1698 77c1b1d8593aff88584f3d00504e6c49 417 PANTHER PTHR11228:SF7 28 397 2.5E-39 T 22-04-2016 YE2604 cc6a593b3457d9d03dfb5cc9921a516c 338 PANTHER PTHR10996 145 338 4.1E-98 T 22-04-2016 YE2604 cc6a593b3457d9d03dfb5cc9921a516c 338 PANTHER PTHR10996 32 128 4.1E-98 T 22-04-2016 YE2604 cc6a593b3457d9d03dfb5cc9921a516c 338 SUPERFAMILY SSF51735 99 307 2.69E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2604 cc6a593b3457d9d03dfb5cc9921a516c 338 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 306 8.8E-57 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 YE2604 cc6a593b3457d9d03dfb5cc9921a516c 338 Gene3D G3DSA:3.40.50.720 111 307 3.2E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2604 cc6a593b3457d9d03dfb5cc9921a516c 338 Gene3D G3DSA:3.40.50.720 31 110 9.1E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2604 cc6a593b3457d9d03dfb5cc9921a516c 338 SUPERFAMILY SSF52283 31 131 1.42E-25 T 22-04-2016 YE2604 cc6a593b3457d9d03dfb5cc9921a516c 338 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 33 336 3.4E-22 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 YE2820 a6aae9a49cb8c0d1e6a93c5780dd8301 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.7E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE2820 a6aae9a49cb8c0d1e6a93c5780dd8301 289 SUPERFAMILY SSF46785 1 109 1.74E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2820 a6aae9a49cb8c0d1e6a93c5780dd8301 289 Gene3D G3DSA:3.40.190.10 83 190 4.7E-23 T 22-04-2016 YE2820 a6aae9a49cb8c0d1e6a93c5780dd8301 289 Pfam PF03466 LysR substrate binding domain 85 285 3.1E-39 T 22-04-2016 IPR005119 LysR, substrate-binding YE2820 a6aae9a49cb8c0d1e6a93c5780dd8301 289 PANTHER PTHR30126:SF31 1 287 2.9E-130 T 22-04-2016 YE2820 a6aae9a49cb8c0d1e6a93c5780dd8301 289 PANTHER PTHR30126 1 287 2.9E-130 T 22-04-2016 YE2820 a6aae9a49cb8c0d1e6a93c5780dd8301 289 Gene3D G3DSA:1.10.10.10 1 81 2.4E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2820 a6aae9a49cb8c0d1e6a93c5780dd8301 289 Gene3D G3DSA:3.40.190.10 191 255 4.6E-11 T 22-04-2016 YE2820 a6aae9a49cb8c0d1e6a93c5780dd8301 289 SUPERFAMILY SSF53850 85 287 3.95E-38 T 22-04-2016 YE4014 946ae8d3d6ff9c7e1943f9ef61599617 565 Pfam PF07694 5TMR of 5TMR-LYT 30 198 3.4E-58 T 22-04-2016 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 YE4014 946ae8d3d6ff9c7e1943f9ef61599617 565 Gene3D G3DSA:3.30.565.10 422 559 3.4E-11 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE4014 946ae8d3d6ff9c7e1943f9ef61599617 565 SUPERFAMILY SSF55874 426 558 9.9E-12 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE4014 946ae8d3d6ff9c7e1943f9ef61599617 565 PANTHER PTHR34220 3 565 3.5E-304 T 22-04-2016 YE4014 946ae8d3d6ff9c7e1943f9ef61599617 565 Pfam PF06580 Histidine kinase 373 450 2.0E-25 T 22-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 YE4014 946ae8d3d6ff9c7e1943f9ef61599617 565 PANTHER PTHR34220:SF3 3 565 3.5E-304 T 22-04-2016 YE4014 946ae8d3d6ff9c7e1943f9ef61599617 565 SUPERFAMILY SSF55781 236 357 6.87E-5 T 22-04-2016 IPR029016 GAF domain-like YE0381 7a98c354f0d2984cdb05509335c51559 66 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 5 60 7.2E-22 T 22-04-2016 IPR019201 Protein of unknown function DUF2065 YE0381 7a98c354f0d2984cdb05509335c51559 66 PANTHER PTHR38602:SF1 1 64 2.0E-23 T 22-04-2016 YE0381 7a98c354f0d2984cdb05509335c51559 66 PANTHER PTHR38602 1 64 2.0E-23 T 22-04-2016 YE0155 ccbe2b3cb59247b69ddcb5617cde57f1 492 Gene3D G3DSA:1.10.1040.10 362 482 1.5E-16 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 YE0155 ccbe2b3cb59247b69ddcb5617cde57f1 492 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 7.2E-59 T 22-04-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YE0155 ccbe2b3cb59247b69ddcb5617cde57f1 492 PANTHER PTHR21371 1 490 1.4E-222 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YE0155 ccbe2b3cb59247b69ddcb5617cde57f1 492 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 342 5.2E-27 T 22-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YE0155 ccbe2b3cb59247b69ddcb5617cde57f1 492 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 355 483 1.1E-21 T 22-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YE0155 ccbe2b3cb59247b69ddcb5617cde57f1 492 SUPERFAMILY SSF48179 348 485 4.93E-41 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 YE0155 ccbe2b3cb59247b69ddcb5617cde57f1 492 SUPERFAMILY SSF51735 30 209 7.74E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain YE0155 ccbe2b3cb59247b69ddcb5617cde57f1 492 SUPERFAMILY SSF48179 210 343 4.93E-40 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 YE0155 ccbe2b3cb59247b69ddcb5617cde57f1 492 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 368 2.6E-135 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YE0155 ccbe2b3cb59247b69ddcb5617cde57f1 492 Gene3D G3DSA:3.40.50.720 1 201 1.8E-75 T 22-04-2016 IPR016040 NAD(P)-binding domain YE0155 ccbe2b3cb59247b69ddcb5617cde57f1 492 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 22 486 39.214 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YE4142 86d9106c7707f7e22fe5f95a6fdca3bf 75 PANTHER PTHR37550:SF3 1 75 1.7E-12 T 22-04-2016 YE4142 86d9106c7707f7e22fe5f95a6fdca3bf 75 Gene3D G3DSA:2.10.260.10 1 57 7.4E-6 T 22-04-2016 YE4142 86d9106c7707f7e22fe5f95a6fdca3bf 75 SUPERFAMILY SSF89447 3 68 1.49E-10 T 22-04-2016 YE4142 86d9106c7707f7e22fe5f95a6fdca3bf 75 SMART SM00966 7 48 8.3E-5 T 22-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 YE4142 86d9106c7707f7e22fe5f95a6fdca3bf 75 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 7 50 1.1E-7 T 22-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 YE4142 86d9106c7707f7e22fe5f95a6fdca3bf 75 PANTHER PTHR37550 1 75 1.7E-12 T 22-04-2016 YE2155 43434d70f0e26f51ca087532f16e3c76 114 SUPERFAMILY SSF52833 2 101 5.98E-36 T 22-04-2016 IPR012336 Thioredoxin-like fold YE2155 43434d70f0e26f51ca087532f16e3c76 114 PIRSF PIRSF005894 1 107 3.4E-52 T 22-04-2016 IPR014434 Monothiol glutaredoxin YE2155 43434d70f0e26f51ca087532f16e3c76 114 PANTHER PTHR10293 1 114 1.1E-59 T 22-04-2016 IPR004480 Monothiol glutaredoxin-related YE2155 43434d70f0e26f51ca087532f16e3c76 114 Pfam PF00462 Glutaredoxin 16 80 8.6E-19 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 YE2155 43434d70f0e26f51ca087532f16e3c76 114 Gene3D G3DSA:3.40.30.10 7 101 1.3E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold YE2155 43434d70f0e26f51ca087532f16e3c76 114 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 2.9E-47 T 22-04-2016 IPR004480 Monothiol glutaredoxin-related YE2435 b5e4f74f1d542aa71419b909e46594c6 315 Gene3D G3DSA:3.40.50.2020 2 159 1.2E-72 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YE2435 b5e4f74f1d542aa71419b909e46594c6 315 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 22-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 YE2435 b5e4f74f1d542aa71419b909e46594c6 315 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 2.0E-49 T 22-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 YE2435 b5e4f74f1d542aa71419b909e46594c6 315 SMART SM01400 4 121 5.7E-76 T 22-04-2016 YE2435 b5e4f74f1d542aa71419b909e46594c6 315 PANTHER PTHR10210 2 315 7.8E-189 T 22-04-2016 YE2435 b5e4f74f1d542aa71419b909e46594c6 315 PANTHER PTHR10210:SF41 2 315 7.8E-189 T 22-04-2016 YE2435 b5e4f74f1d542aa71419b909e46594c6 315 SUPERFAMILY SSF53271 69 306 5.0E-67 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YE2435 b5e4f74f1d542aa71419b909e46594c6 315 Pfam PF14572 Phosphoribosyl synthetase-associated domain 204 313 1.1E-30 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 YE2435 b5e4f74f1d542aa71419b909e46594c6 315 Gene3D G3DSA:3.40.50.2020 160 285 2.9E-53 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YE2435 b5e4f74f1d542aa71419b909e46594c6 315 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 314 4.4E-127 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 YE2435 b5e4f74f1d542aa71419b909e46594c6 315 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 4 314 49.803 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 YE3550 5721680e4f194a195cb903e6fd80fedc 409 Pfam PF09480 Type III secretion system protein PrgH-EprH (PrgH) 17 404 2.8E-74 T 22-04-2016 IPR019029 Type III secretion system, PrgH/EprH-like GO:0016021 YE0334 c6f7543303495467624c16e2e7992126 181 Gene3D G3DSA:3.40.1570.10 5 170 9.6E-70 T 22-04-2016 YE0334 c6f7543303495467624c16e2e7992126 181 Pfam PF06228 Haem utilisation ChuX/HutX 28 162 1.6E-32 T 22-04-2016 IPR010413 Heme utilization carrier protein HutX-like YE0334 c6f7543303495467624c16e2e7992126 181 TIGRFAM TIGR04108 HutX: putative heme utilization carrier protein HutX 12 162 3.3E-63 T 22-04-2016 IPR010413 Heme utilization carrier protein HutX-like YE0334 c6f7543303495467624c16e2e7992126 181 SUPERFAMILY SSF144064 11 165 1.44E-49 T 22-04-2016 YE0334 c6f7543303495467624c16e2e7992126 181 PIRSF PIRSF030840 1 168 1.3E-84 T 22-04-2016 IPR010413 Heme utilization carrier protein HutX-like YE2588 1d72b847c9bf18d64fba888aaa2d7291 579 SMART SM00304 240 292 9.7E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YE2588 1d72b847c9bf18d64fba888aaa2d7291 579 SMART SM00283 293 540 1.6E-89 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 YE2588 1d72b847c9bf18d64fba888aaa2d7291 579 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 318 340 - T 22-04-2016 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site YE2588 1d72b847c9bf18d64fba888aaa2d7291 579 SUPERFAMILY SSF58104 260 541 4.45E-73 T 22-04-2016 YE2588 1d72b847c9bf18d64fba888aaa2d7291 579 SUPERFAMILY SSF47170 56 190 2.22E-13 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 YE2588 1d72b847c9bf18d64fba888aaa2d7291 579 PANTHER PTHR32089 24 543 2.8E-208 T 22-04-2016 YE2588 1d72b847c9bf18d64fba888aaa2d7291 579 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 352 539 7.3E-61 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 YE2588 1d72b847c9bf18d64fba888aaa2d7291 579 Gene3D G3DSA:1.10.287.950 311 512 9.4E-61 T 22-04-2016 YE2588 1d72b847c9bf18d64fba888aaa2d7291 579 PANTHER PTHR32089:SF35 24 543 2.8E-208 T 22-04-2016 YE2588 1d72b847c9bf18d64fba888aaa2d7291 579 Pfam PF02203 Tar ligand binding domain homologue 27 193 2.4E-27 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 YE2588 1d72b847c9bf18d64fba888aaa2d7291 579 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 420 449 1.9E-60 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE2588 1d72b847c9bf18d64fba888aaa2d7291 579 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 30 55 1.9E-60 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE2588 1d72b847c9bf18d64fba888aaa2d7291 579 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 468 497 1.9E-60 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE2588 1d72b847c9bf18d64fba888aaa2d7291 579 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 391 418 1.9E-60 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE2588 1d72b847c9bf18d64fba888aaa2d7291 579 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 314 343 1.9E-60 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE2588 1d72b847c9bf18d64fba888aaa2d7291 579 Pfam PF00672 HAMP domain 221 288 1.2E-16 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YE1717 d735475b3b4cfca70770dc227de52ad9 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 457 7.9E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE1717 d735475b3b4cfca70770dc227de52ad9 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 422 7.9E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE1717 d735475b3b4cfca70770dc227de52ad9 484 Pfam PF00672 HAMP domain 193 258 7.6E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YE1717 d735475b3b4cfca70770dc227de52ad9 484 SMART SM00387 373 479 9.0E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE1717 d735475b3b4cfca70770dc227de52ad9 484 SUPERFAMILY SSF55874 335 475 1.7E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE1717 d735475b3b4cfca70770dc227de52ad9 484 PANTHER PTHR24423 62 136 4.5E-162 T 22-04-2016 YE1717 d735475b3b4cfca70770dc227de52ad9 484 PANTHER PTHR24423 206 480 4.5E-162 T 22-04-2016 YE1717 d735475b3b4cfca70770dc227de52ad9 484 Gene3D G3DSA:3.30.565.10 339 476 7.9E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE1717 d735475b3b4cfca70770dc227de52ad9 484 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 375 475 1.0E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE1717 d735475b3b4cfca70770dc227de52ad9 484 PANTHER PTHR24423:SF496 62 136 4.5E-162 T 22-04-2016 YE1717 d735475b3b4cfca70770dc227de52ad9 484 PANTHER PTHR24423:SF496 206 480 4.5E-162 T 22-04-2016 YE1717 d735475b3b4cfca70770dc227de52ad9 484 SUPERFAMILY SSF47384 247 322 3.34E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE1717 d735475b3b4cfca70770dc227de52ad9 484 Pfam PF08918 PhoQ Sensor 8 185 3.9E-89 T 22-04-2016 IPR015014 PhoQ Sensor GO:0000160|GO:0004673|GO:0005524|GO:0016020|GO:0018106|GO:0046872 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- YE1717 d735475b3b4cfca70770dc227de52ad9 484 SMART SM00388 264 328 0.0049 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE3479 4d02bd9d9b3275de510e68e5116ad485 377 SUPERFAMILY SSF103473 88 150 2.62E-5 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE3479 4d02bd9d9b3275de510e68e5116ad485 377 SUPERFAMILY SSF103473 240 371 2.62E-5 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE3479 4d02bd9d9b3275de510e68e5116ad485 377 PANTHER PTHR34184:SF1 1 187 9.9E-82 T 22-04-2016 YE3479 4d02bd9d9b3275de510e68e5116ad485 377 PANTHER PTHR34184:SF1 223 377 9.9E-82 T 22-04-2016 YE3479 4d02bd9d9b3275de510e68e5116ad485 377 PANTHER PTHR34184 1 187 9.9E-82 T 22-04-2016 YE3479 4d02bd9d9b3275de510e68e5116ad485 377 PANTHER PTHR34184 223 377 9.9E-82 T 22-04-2016 YE3479 4d02bd9d9b3275de510e68e5116ad485 377 Pfam PF03773 Predicted permease 10 374 8.6E-53 T 22-04-2016 IPR005524 Predicted permease DUF318 YE0667 e886b7993e98c1ba84850388ebcd8fbc 490 Pfam PF01225 Mur ligase family, catalytic domain 20 97 4.3E-13 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 YE0667 e886b7993e98c1ba84850388ebcd8fbc 490 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 2 486 34.247 T 22-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 YE0667 e886b7993e98c1ba84850388ebcd8fbc 490 Pfam PF08245 Mur ligase middle domain 109 313 1.3E-51 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YE0667 e886b7993e98c1ba84850388ebcd8fbc 490 SUPERFAMILY SSF53244 334 486 7.02E-51 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YE0667 e886b7993e98c1ba84850388ebcd8fbc 490 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 16 486 9.3E-167 T 22-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 YE0667 e886b7993e98c1ba84850388ebcd8fbc 490 Gene3D G3DSA:3.90.190.20 338 479 3.7E-58 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YE0667 e886b7993e98c1ba84850388ebcd8fbc 490 SUPERFAMILY SSF63418 1 98 8.24E-24 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 YE0667 e886b7993e98c1ba84850388ebcd8fbc 490 PANTHER PTHR23135 4 486 9.2E-226 T 22-04-2016 YE0667 e886b7993e98c1ba84850388ebcd8fbc 490 Pfam PF02875 Mur ligase family, glutamate ligase domain 334 420 4.8E-25 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YE0667 e886b7993e98c1ba84850388ebcd8fbc 490 SUPERFAMILY SSF53623 100 333 4.71E-78 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YE0667 e886b7993e98c1ba84850388ebcd8fbc 490 Gene3D G3DSA:3.40.1390.10 2 99 1.8E-31 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 YE0667 e886b7993e98c1ba84850388ebcd8fbc 490 PANTHER PTHR23135:SF4 4 486 9.2E-226 T 22-04-2016 YE0667 e886b7993e98c1ba84850388ebcd8fbc 490 Gene3D G3DSA:3.40.1190.10 103 337 3.9E-79 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YE2003 56777d0efc92c994075041a1587a2796 327 PANTHER PTHR30036 1 326 6.1E-116 T 22-04-2016 YE2003 56777d0efc92c994075041a1587a2796 327 PANTHER PTHR30036:SF1 1 326 6.1E-116 T 22-04-2016 YE2003 56777d0efc92c994075041a1587a2796 327 Gene3D G3DSA:3.40.50.2300 25 147 2.2E-41 T 22-04-2016 YE2003 56777d0efc92c994075041a1587a2796 327 Gene3D G3DSA:3.40.50.2300 148 296 3.6E-52 T 22-04-2016 YE2003 56777d0efc92c994075041a1587a2796 327 PIRSF PIRSF002816 2 326 1.0E-149 T 22-04-2016 IPR026266 L-arabinose-binding periplasmic protein GO:0042882 YE2003 56777d0efc92c994075041a1587a2796 327 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 26 319 2.3E-86 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain YE2003 56777d0efc92c994075041a1587a2796 327 SUPERFAMILY SSF53822 26 324 1.13E-67 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YE0846 1427e88b35e1b15dad7af190820348f0 120 Pfam PF01245 Ribosomal protein L19 3 113 1.1E-49 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0846 1427e88b35e1b15dad7af190820348f0 120 PRINTS PR00061 Ribosomal protein L19 signature 4 33 9.8E-43 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0846 1427e88b35e1b15dad7af190820348f0 120 PRINTS PR00061 Ribosomal protein L19 signature 88 113 9.8E-43 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0846 1427e88b35e1b15dad7af190820348f0 120 PRINTS PR00061 Ribosomal protein L19 signature 34 63 9.8E-43 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0846 1427e88b35e1b15dad7af190820348f0 120 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 3.3E-52 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0846 1427e88b35e1b15dad7af190820348f0 120 SUPERFAMILY SSF50104 2 116 1.2E-47 T 22-04-2016 IPR008991 Translation protein SH3-like domain YE0846 1427e88b35e1b15dad7af190820348f0 120 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 30.023 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0846 1427e88b35e1b15dad7af190820348f0 120 PANTHER PTHR15680 1 116 1.6E-58 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0846 1427e88b35e1b15dad7af190820348f0 120 PIRSF PIRSF002191 1 120 3.3E-50 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0846 1427e88b35e1b15dad7af190820348f0 120 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 22-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0289 b0247c2fef09086eb37943d2ec0e654f 376 SUPERFAMILY SSF102114 39 362 4.58E-53 T 22-04-2016 YE0289 b0247c2fef09086eb37943d2ec0e654f 376 SMART SM00876 259 362 8.1E-31 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 YE0289 b0247c2fef09086eb37943d2ec0e654f 376 Pfam PF04055 Radical SAM superfamily 83 220 8.1E-10 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 YE0289 b0247c2fef09086eb37943d2ec0e654f 376 PANTHER PTHR22976 1 376 7.5E-230 T 22-04-2016 YE0289 b0247c2fef09086eb37943d2ec0e654f 376 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 5 369 2.2E-164 T 22-04-2016 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892|UniPathway: UPA00060 YE0289 b0247c2fef09086eb37943d2ec0e654f 376 PANTHER PTHR22976:SF17 1 376 7.5E-230 T 22-04-2016 YE0289 b0247c2fef09086eb37943d2ec0e654f 376 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 259 361 2.7E-23 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 YE0289 b0247c2fef09086eb37943d2ec0e654f 376 Gene3D G3DSA:3.20.20.70 38 363 8.5E-48 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YE1280 aa8c00353362d99d0b2a89341ee88972 310 SUPERFAMILY SSF53335 15 293 5.11E-49 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE1280 aa8c00353362d99d0b2a89341ee88972 310 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 299 7.3E-100 T 22-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 YE1280 aa8c00353362d99d0b2a89341ee88972 310 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 295 3.2E-137 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 YE1280 aa8c00353362d99d0b2a89341ee88972 310 PANTHER PTHR18895 4 299 4.2E-189 T 22-04-2016 YE1280 aa8c00353362d99d0b2a89341ee88972 310 PIRSF PIRSF037167 2 307 1.9E-147 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 YE1280 aa8c00353362d99d0b2a89341ee88972 310 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 YE1280 aa8c00353362d99d0b2a89341ee88972 310 PANTHER PTHR18895:SF66 4 299 4.2E-189 T 22-04-2016 YE1280 aa8c00353362d99d0b2a89341ee88972 310 Gene3D G3DSA:3.40.50.150 108 285 7.2E-50 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE1280 aa8c00353362d99d0b2a89341ee88972 310 Pfam PF05175 Methyltransferase small domain 132 215 9.2E-16 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 YE1280 aa8c00353362d99d0b2a89341ee88972 310 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 300 53.038 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 YE1280 aa8c00353362d99d0b2a89341ee88972 310 Gene3D G3DSA:1.10.8.10 15 106 6.3E-5 T 22-04-2016 YE1942 cfe316a2d2e6faa87acaf83c8cffb026 160 Gene3D G3DSA:1.10.260.40 5 76 1.6E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE1942 cfe316a2d2e6faa87acaf83c8cffb026 160 Pfam PF01381 Helix-turn-helix 6 59 2.1E-12 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YE1942 cfe316a2d2e6faa87acaf83c8cffb026 160 SUPERFAMILY SSF47413 5 65 3.33E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE1942 cfe316a2d2e6faa87acaf83c8cffb026 160 Pfam PF13239 2TM domain 82 157 4.6E-11 T 22-04-2016 IPR025698 2TM domain YE1942 cfe316a2d2e6faa87acaf83c8cffb026 160 PANTHER PTHR10245 5 122 4.8E-13 T 22-04-2016 YE1942 cfe316a2d2e6faa87acaf83c8cffb026 160 SMART SM00530 5 59 2.5E-13 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YE0079 7a21f6254473d9fd2ff1c4f3f25a55ec 82 Gene3D G3DSA:3.40.30.10 1 73 9.9E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold YE0079 7a21f6254473d9fd2ff1c4f3f25a55ec 82 PRINTS PR00160 Glutaredoxin signature 60 73 8.7E-18 T 22-04-2016 IPR014025 Glutaredoxin subgroup YE0079 7a21f6254473d9fd2ff1c4f3f25a55ec 82 PRINTS PR00160 Glutaredoxin signature 46 59 8.7E-18 T 22-04-2016 IPR014025 Glutaredoxin subgroup YE0079 7a21f6254473d9fd2ff1c4f3f25a55ec 82 PRINTS PR00160 Glutaredoxin signature 4 22 8.7E-18 T 22-04-2016 IPR014025 Glutaredoxin subgroup YE0079 7a21f6254473d9fd2ff1c4f3f25a55ec 82 PANTHER PTHR10168 3 82 8.4E-33 T 22-04-2016 YE0079 7a21f6254473d9fd2ff1c4f3f25a55ec 82 Pfam PF00462 Glutaredoxin 4 63 1.0E-25 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 YE0079 7a21f6254473d9fd2ff1c4f3f25a55ec 82 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 22-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 YE0079 7a21f6254473d9fd2ff1c4f3f25a55ec 82 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 82 9.0E-37 T 22-04-2016 IPR011900 Glutaredoxin, GrxC GO:0045454 YE0079 7a21f6254473d9fd2ff1c4f3f25a55ec 82 SUPERFAMILY SSF52833 1 82 4.5E-30 T 22-04-2016 IPR012336 Thioredoxin-like fold YE3130 be553448929f8e5102b4a977bbc1c873 628 SUPERFAMILY SSF54534 225 357 2.88E-23 T 22-04-2016 YE3130 be553448929f8e5102b4a977bbc1c873 628 PANTHER PTHR10657:SF13 1 175 1.1E-232 T 22-04-2016 YE3130 be553448929f8e5102b4a977bbc1c873 628 PANTHER PTHR10657:SF13 203 518 1.1E-232 T 22-04-2016 YE3130 be553448929f8e5102b4a977bbc1c873 628 Pfam PF13145 PPIC-type PPIASE domain 379 486 4.7E-6 T 22-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 YE3130 be553448929f8e5102b4a977bbc1c873 628 Pfam PF13145 PPIC-type PPIASE domain 249 370 1.9E-24 T 22-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 YE3130 be553448929f8e5102b4a977bbc1c873 628 Gene3D G3DSA:3.10.50.40 261 382 6.2E-30 T 22-04-2016 YE3130 be553448929f8e5102b4a977bbc1c873 628 Gene3D G3DSA:3.10.50.40 405 497 6.5E-4 T 22-04-2016 YE3130 be553448929f8e5102b4a977bbc1c873 628 Pfam PF13624 SurA N-terminal domain 1 166 8.1E-53 T 22-04-2016 YE3130 be553448929f8e5102b4a977bbc1c873 628 Gene3D G3DSA:1.10.3120.10 48 123 1.6E-4 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 YE3130 be553448929f8e5102b4a977bbc1c873 628 SUPERFAMILY SSF109998 203 240 5.89E-36 T 22-04-2016 IPR027304 Trigger factor/SurA domain YE3130 be553448929f8e5102b4a977bbc1c873 628 SUPERFAMILY SSF109998 39 169 5.89E-36 T 22-04-2016 IPR027304 Trigger factor/SurA domain YE3130 be553448929f8e5102b4a977bbc1c873 628 PANTHER PTHR10657 1 175 1.1E-232 T 22-04-2016 YE3130 be553448929f8e5102b4a977bbc1c873 628 PANTHER PTHR10657 203 518 1.1E-232 T 22-04-2016 YE0392 0a784ffdf5113f66e902cce07d92495a 130 PANTHER PTHR21011 1 130 2.3E-50 T 22-04-2016 YE0392 0a784ffdf5113f66e902cce07d92495a 130 Pfam PF01250 Ribosomal protein S6 3 91 8.3E-28 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 YE0392 0a784ffdf5113f66e902cce07d92495a 130 SUPERFAMILY SSF54995 1 103 1.83E-37 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 YE0392 0a784ffdf5113f66e902cce07d92495a 130 Gene3D G3DSA:3.30.70.60 1 103 4.9E-42 T 22-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 YE0392 0a784ffdf5113f66e902cce07d92495a 130 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.959 T 22-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 YE0392 0a784ffdf5113f66e902cce07d92495a 130 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 22-04-2016 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 YE0392 0a784ffdf5113f66e902cce07d92495a 130 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 94 1.0E-37 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 YE0392 0a784ffdf5113f66e902cce07d92495a 130 PANTHER PTHR21011:SF1 1 130 2.3E-50 T 22-04-2016 YE0228 ae33b100384ad505b00094cf1a727753 285 PIRSF PIRSF000770 5 285 5.4E-33 T 22-04-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 YE0228 ae33b100384ad505b00094cf1a727753 285 Pfam PF04545 Sigma-70, region 4 229 280 3.5E-16 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE0228 ae33b100384ad505b00094cf1a727753 285 Gene3D G3DSA:1.10.601.10 15 122 2.5E-34 T 22-04-2016 YE0228 ae33b100384ad505b00094cf1a727753 285 SUPERFAMILY SSF88946 12 122 7.06E-40 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE0228 ae33b100384ad505b00094cf1a727753 285 Pfam PF04542 Sigma-70 region 2 53 122 1.5E-16 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE0228 ae33b100384ad505b00094cf1a727753 285 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 285 54.296 T 22-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 YE0228 ae33b100384ad505b00094cf1a727753 285 PANTHER PTHR30376 2 284 1.4E-129 T 22-04-2016 YE0228 ae33b100384ad505b00094cf1a727753 285 Pfam PF00140 Sigma-70 factor, region 1.2 15 40 4.2E-7 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE0228 ae33b100384ad505b00094cf1a727753 285 Gene3D G3DSA:1.10.10.10 224 282 3.7E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0228 ae33b100384ad505b00094cf1a727753 285 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 14 284 9.6E-130 T 22-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 YE0228 ae33b100384ad505b00094cf1a727753 285 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 253 279 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE0228 ae33b100384ad505b00094cf1a727753 285 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE0228 ae33b100384ad505b00094cf1a727753 285 SUPERFAMILY SSF88659 200 284 5.05E-19 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE0228 ae33b100384ad505b00094cf1a727753 285 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 280 7.5E-35 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE0228 ae33b100384ad505b00094cf1a727753 285 PRINTS PR00046 Major sigma-70 factor signature 253 268 3.9E-19 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE0228 ae33b100384ad505b00094cf1a727753 285 PRINTS PR00046 Major sigma-70 factor signature 268 279 3.9E-19 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE0228 ae33b100384ad505b00094cf1a727753 285 PRINTS PR00046 Major sigma-70 factor signature 77 90 3.9E-19 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE0228 ae33b100384ad505b00094cf1a727753 285 PRINTS PR00046 Major sigma-70 factor signature 233 245 3.9E-19 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE3634 6689f9cd6fbaa4a06d2a9c5911b868be 140 PANTHER PTHR36506 3 135 7.8E-33 T 22-04-2016 YE3634 6689f9cd6fbaa4a06d2a9c5911b868be 140 Pfam PF01478 Type IV leader peptidase family 11 108 1.0E-8 T 22-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 YE3634 6689f9cd6fbaa4a06d2a9c5911b868be 140 PANTHER PTHR36506:SF1 3 135 7.8E-33 T 22-04-2016 YE3336 9a8ce428317c35a5de8691623722542a 295 SUPERFAMILY SSF56281 27 251 2.11E-39 T 22-04-2016 IPR001279 Metallo-beta-lactamase YE3336 9a8ce428317c35a5de8691623722542a 295 Pfam PF00753 Metallo-beta-lactamase superfamily 44 228 1.9E-7 T 22-04-2016 IPR001279 Metallo-beta-lactamase YE3336 9a8ce428317c35a5de8691623722542a 295 SMART SM00849 43 228 2.4E-16 T 22-04-2016 IPR001279 Metallo-beta-lactamase YE3336 9a8ce428317c35a5de8691623722542a 295 Gene3D G3DSA:3.60.15.10 33 254 5.3E-37 T 22-04-2016 IPR001279 Metallo-beta-lactamase YE3336 9a8ce428317c35a5de8691623722542a 295 PANTHER PTHR11935 1 286 8.6E-107 T 22-04-2016 YE3336 9a8ce428317c35a5de8691623722542a 295 PANTHER PTHR11935:SF5 1 286 8.6E-107 T 22-04-2016 YE0640 79e53d2b1ae8d54a3e8c39ae9f786eb2 233 Gene3D G3DSA:3.40.50.300 2 221 1.0E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0640 79e53d2b1ae8d54a3e8c39ae9f786eb2 233 SUPERFAMILY SSF52540 1 221 4.84E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0640 79e53d2b1ae8d54a3e8c39ae9f786eb2 233 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 2 210 9.8E-102 T 22-04-2016 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0006810|GO:0016021|GO:0042626 YE0640 79e53d2b1ae8d54a3e8c39ae9f786eb2 233 Pfam PF00005 ABC transporter 19 157 2.9E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE0640 79e53d2b1ae8d54a3e8c39ae9f786eb2 233 SMART SM00382 24 214 3.9E-19 T 22-04-2016 IPR003593 AAA+ ATPase domain YE0640 79e53d2b1ae8d54a3e8c39ae9f786eb2 233 PANTHER PTHR24220:SF439 1 219 8.6E-105 T 22-04-2016 YE0640 79e53d2b1ae8d54a3e8c39ae9f786eb2 233 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE0640 79e53d2b1ae8d54a3e8c39ae9f786eb2 233 PANTHER PTHR24220 1 219 8.6E-105 T 22-04-2016 YE1849 a61a6f00eedabc3db9a97722aa54d597 182 SUPERFAMILY SSF55729 1 151 7.48E-38 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE1849 a61a6f00eedabc3db9a97722aa54d597 182 PANTHER PTHR13256:SF19 1 182 1.6E-44 T 22-04-2016 YE1849 a61a6f00eedabc3db9a97722aa54d597 182 Gene3D G3DSA:3.40.630.30 2 181 8.4E-47 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE1849 a61a6f00eedabc3db9a97722aa54d597 182 PANTHER PTHR13256 1 182 1.6E-44 T 22-04-2016 YE1849 a61a6f00eedabc3db9a97722aa54d597 182 Pfam PF13302 Acetyltransferase (GNAT) domain 8 148 8.4E-30 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YE0377 3583eefaa2d5ba1564452f22f33acd87 101 PANTHER PTHR34772:SF1 1 94 2.6E-46 T 22-04-2016 YE0377 3583eefaa2d5ba1564452f22f33acd87 101 PANTHER PTHR34772 1 94 2.6E-46 T 22-04-2016 YE0377 3583eefaa2d5ba1564452f22f33acd87 101 SUPERFAMILY SSF50182 7 69 5.02E-24 T 22-04-2016 IPR010920 LSM domain YE0377 3583eefaa2d5ba1564452f22f33acd87 101 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.244 T 22-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 YE0377 3583eefaa2d5ba1564452f22f33acd87 101 Gene3D G3DSA:2.30.30.100 1 74 7.8E-38 T 22-04-2016 YE0377 3583eefaa2d5ba1564452f22f33acd87 101 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 2.8E-29 T 22-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 YE3756 98e39c69507ae1d79910cc87a295956c 187 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 4 186 27.896 T 22-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 YE3756 98e39c69507ae1d79910cc87a295956c 187 PANTHER PTHR37481 2 187 3.4E-66 T 22-04-2016 YE3756 98e39c69507ae1d79910cc87a295956c 187 PANTHER PTHR37481:SF1 2 187 3.4E-66 T 22-04-2016 YE3756 98e39c69507ae1d79910cc87a295956c 187 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 7 183 3.1E-56 T 22-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 YE3756 98e39c69507ae1d79910cc87a295956c 187 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 13 184 3.7E-55 T 22-04-2016 IPR010664 Lipopolysaccharide assembly, LptC-related YE3756 98e39c69507ae1d79910cc87a295956c 187 PIRSF PIRSF028513 1 187 6.0E-41 T 22-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 YE2402 5379f202e8f7039c05cd1b495db4ba59 323 SUPERFAMILY SSF53335 91 323 4.89E-33 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE2402 5379f202e8f7039c05cd1b495db4ba59 323 Gene3D G3DSA:3.40.50.150 91 315 5.9E-28 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE2402 5379f202e8f7039c05cd1b495db4ba59 323 PANTHER PTHR10108 48 322 3.0E-139 T 22-04-2016 YE2402 5379f202e8f7039c05cd1b495db4ba59 323 Pfam PF08003 Protein of unknown function (DUF1698) 7 322 4.7E-165 T 22-04-2016 IPR027555 tRNA (mo5U34)-methyltransferase-like YE2402 5379f202e8f7039c05cd1b495db4ba59 323 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 8 321 9.4E-146 T 22-04-2016 IPR010017 tRNA (mo5U34)-methyltransferase GO:0002098|GO:0016300 YE2402 5379f202e8f7039c05cd1b495db4ba59 323 Hamap MF_01590 tRNA (mo5U34)-methyltransferase [cmoB]. 12 322 54.423 T 22-04-2016 IPR010017 tRNA (mo5U34)-methyltransferase GO:0002098|GO:0016300 YE2402 5379f202e8f7039c05cd1b495db4ba59 323 PANTHER PTHR10108:SF847 48 322 3.0E-139 T 22-04-2016 YE3991 81c16498dd8eca6f1b84601835312f37 801 PANTHER PTHR11468:SF10 1 797 0.0 T 22-04-2016 YE3991 81c16498dd8eca6f1b84601835312f37 801 Gene3D G3DSA:3.40.50.2000 7 467 7.1E-180 T 22-04-2016 YE3991 81c16498dd8eca6f1b84601835312f37 801 Gene3D G3DSA:3.40.50.2000 468 784 2.7E-137 T 22-04-2016 YE3991 81c16498dd8eca6f1b84601835312f37 801 Pfam PF00343 Carbohydrate phosphorylase 94 798 0.0 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 YE3991 81c16498dd8eca6f1b84601835312f37 801 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 12 798 0.0 T 22-04-2016 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 YE3991 81c16498dd8eca6f1b84601835312f37 801 SUPERFAMILY SSF53756 7 799 2.72E-294 T 22-04-2016 YE3991 81c16498dd8eca6f1b84601835312f37 801 PIRSF PIRSF000460 2 801 1.1E-206 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 YE3991 81c16498dd8eca6f1b84601835312f37 801 PANTHER PTHR11468 1 797 0.0 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 YE3991 81c16498dd8eca6f1b84601835312f37 801 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 643 655 - T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 YE1294 227b8acd504afa2575dfd25cab1037ab 104 PANTHER PTHR34581:SF2 3 101 6.8E-41 T 22-04-2016 YE1294 227b8acd504afa2575dfd25cab1037ab 104 PANTHER PTHR34581 3 101 6.8E-41 T 22-04-2016 YE1294 227b8acd504afa2575dfd25cab1037ab 104 SUPERFAMILY SSF52794 1 101 8.37E-36 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 YE1294 227b8acd504afa2575dfd25cab1037ab 104 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 94 2.4E-19 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 YE1294 227b8acd504afa2575dfd25cab1037ab 104 Gene3D G3DSA:3.40.50.270 1 102 8.8E-38 T 22-04-2016 YE2489 db474c544f954abadfd73467e96347e4 289 Gene3D G3DSA:3.40.50.150 114 288 1.4E-30 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE2489 db474c544f954abadfd73467e96347e4 289 Gene3D G3DSA:2.60.120.10 4 113 7.4E-49 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YE2489 db474c544f954abadfd73467e96347e4 289 PIRSF PIRSF005215 1 289 1.6E-146 T 22-04-2016 IPR014431 Tellurite resistance methyltransferase, TehB type-2 YE2489 db474c544f954abadfd73467e96347e4 289 PANTHER PTHR10108:SF927 1 277 3.7E-103 T 22-04-2016 YE2489 db474c544f954abadfd73467e96347e4 289 Pfam PF03848 Tellurite resistance protein TehB 93 285 1.8E-105 T 22-04-2016 IPR015985 Tellurite resistance methyltransferase TehB-like domain YE2489 db474c544f954abadfd73467e96347e4 289 PANTHER PTHR10108 1 277 3.7E-103 T 22-04-2016 YE2489 db474c544f954abadfd73467e96347e4 289 SUPERFAMILY SSF53335 70 277 1.53E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE2489 db474c544f954abadfd73467e96347e4 289 TIGRFAM TIGR00477 tehB: tellurite resistance protein TehB 51 288 4.6E-109 T 22-04-2016 IPR004537 Tellurite resistance methyltransferase, TehB GO:0005737|GO:0008757|GO:0046690 YE2489 db474c544f954abadfd73467e96347e4 289 Pfam PF09313 Domain of unknown function (DUF1971) 11 91 5.6E-30 T 22-04-2016 IPR015392 Domain of unknown function DUF1971 YE2489 db474c544f954abadfd73467e96347e4 289 SUPERFAMILY SSF51197 5 104 2.33E-36 T 22-04-2016 YE0205 b89e73fc137d3bb6530fbda2a8e0fd8e 206 TIGRFAM TIGR00949 2A76: homoserine/Threonine efflux protein 18 202 5.6E-62 T 22-04-2016 IPR004778 Homoserine/Threonine efflux protein GO:0016021 YE0205 b89e73fc137d3bb6530fbda2a8e0fd8e 206 PANTHER PTHR30086 1 206 9.9E-137 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 YE0205 b89e73fc137d3bb6530fbda2a8e0fd8e 206 PIRSF PIRSF006324 1 206 2.0E-41 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 YE0205 b89e73fc137d3bb6530fbda2a8e0fd8e 206 PANTHER PTHR30086:SF1 1 206 9.9E-137 T 22-04-2016 YE0205 b89e73fc137d3bb6530fbda2a8e0fd8e 206 Pfam PF01810 LysE type translocator 14 205 1.3E-52 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 YE2211 eba1fb9159ca8a0983d8ff0a6fb0ad55 319 PANTHER PTHR11922 54 312 1.0E-121 T 22-04-2016 YE2211 eba1fb9159ca8a0983d8ff0a6fb0ad55 319 PANTHER PTHR11922:SF25 54 312 1.0E-121 T 22-04-2016 YE2211 eba1fb9159ca8a0983d8ff0a6fb0ad55 319 Gene3D G3DSA:1.20.970.10 1 55 9.2E-19 T 22-04-2016 YE2211 eba1fb9159ca8a0983d8ff0a6fb0ad55 319 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 1 316 6.3E-122 T 22-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 YE2211 eba1fb9159ca8a0983d8ff0a6fb0ad55 319 Pfam PF00591 Glycosyl transferase family, a/b domain 61 307 9.4E-98 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 YE2211 eba1fb9159ca8a0983d8ff0a6fb0ad55 319 SUPERFAMILY SSF52418 57 315 1.18E-90 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 YE2211 eba1fb9159ca8a0983d8ff0a6fb0ad55 319 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 1 318 36.674 T 22-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 YE2211 eba1fb9159ca8a0983d8ff0a6fb0ad55 319 Gene3D G3DSA:3.40.1030.10 61 316 3.7E-97 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 YE2211 eba1fb9159ca8a0983d8ff0a6fb0ad55 319 SUPERFAMILY SSF47648 1 54 1.11E-11 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain YE2211 eba1fb9159ca8a0983d8ff0a6fb0ad55 319 Pfam PF02885 Glycosyl transferase family, helical bundle domain 2 49 2.1E-9 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain YE4173 ad9d0a32003b945567d9039cbfa0623b 462 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 371 439 1.0E-32 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 YE4173 ad9d0a32003b945567d9039cbfa0623b 462 PANTHER PTHR30050:SF2 125 462 2.4E-251 T 22-04-2016 YE4173 ad9d0a32003b945567d9039cbfa0623b 462 PANTHER PTHR30050:SF2 1 98 2.4E-251 T 22-04-2016 YE4173 ad9d0a32003b945567d9039cbfa0623b 462 SUPERFAMILY SSF52540 127 338 7.92E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE4173 ad9d0a32003b945567d9039cbfa0623b 462 Pfam PF00308 Bacterial dnaA protein 128 344 5.6E-99 T 22-04-2016 IPR013317 Chromosomal replication initiator protein DnaA YE4173 ad9d0a32003b945567d9039cbfa0623b 462 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 258 285 1.2E-54 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like YE4173 ad9d0a32003b945567d9039cbfa0623b 462 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 192 206 1.2E-54 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like YE4173 ad9d0a32003b945567d9039cbfa0623b 462 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 420 439 1.2E-54 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like YE4173 ad9d0a32003b945567d9039cbfa0623b 462 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 224 238 1.2E-54 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like YE4173 ad9d0a32003b945567d9039cbfa0623b 462 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 160 180 1.2E-54 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like YE4173 ad9d0a32003b945567d9039cbfa0623b 462 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 460 4.4E-186 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 YE4173 ad9d0a32003b945567d9039cbfa0623b 462 PANTHER PTHR30050 125 462 2.4E-251 T 22-04-2016 YE4173 ad9d0a32003b945567d9039cbfa0623b 462 PANTHER PTHR30050 1 98 2.4E-251 T 22-04-2016 YE4173 ad9d0a32003b945567d9039cbfa0623b 462 SMART SM00760 370 439 6.1E-45 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 YE4173 ad9d0a32003b945567d9039cbfa0623b 462 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 461 34.443 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 YE4173 ad9d0a32003b945567d9039cbfa0623b 462 Gene3D G3DSA:1.10.1750.10 361 461 7.2E-43 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 YE4173 ad9d0a32003b945567d9039cbfa0623b 462 Gene3D G3DSA:3.40.50.300 117 291 5.8E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE4173 ad9d0a32003b945567d9039cbfa0623b 462 SUPERFAMILY SSF48295 358 461 3.4E-38 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 YE4173 ad9d0a32003b945567d9039cbfa0623b 462 Pfam PF11638 DnaA N-terminal domain 4 64 1.4E-19 T 22-04-2016 IPR024633 DnaA N-terminal domain YE4173 ad9d0a32003b945567d9039cbfa0623b 462 ProSitePatterns PS01008 DnaA protein signature. 420 439 - T 22-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 YE4173 ad9d0a32003b945567d9039cbfa0623b 462 Gene3D G3DSA:1.10.8.60 293 360 5.5E-30 T 22-04-2016 YE4173 ad9d0a32003b945567d9039cbfa0623b 462 SMART SM00382 159 361 6.3E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain YE2412 3f9ae10f6498da28798c436b196f3f9b 194 SUPERFAMILY SSF55729 12 186 1.4E-41 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE2412 3f9ae10f6498da28798c436b196f3f9b 194 Gene3D G3DSA:3.40.630.30 8 187 1.0E-44 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE2412 3f9ae10f6498da28798c436b196f3f9b 194 Pfam PF13302 Acetyltransferase (GNAT) domain 17 162 3.5E-18 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YE2412 3f9ae10f6498da28798c436b196f3f9b 194 PANTHER PTHR13256 9 190 1.1E-86 T 22-04-2016 YE2412 3f9ae10f6498da28798c436b196f3f9b 194 PANTHER PTHR13256:SF24 9 190 1.1E-86 T 22-04-2016 YE3058 c98976f306395d5a16acfc0d39b5c01f 304 Pfam PF01145 SPFH domain / Band 7 family 22 201 8.2E-31 T 22-04-2016 IPR001107 Band 7 domain YE3058 c98976f306395d5a16acfc0d39b5c01f 304 PANTHER PTHR10264:SF27 1 303 2.4E-126 T 22-04-2016 YE3058 c98976f306395d5a16acfc0d39b5c01f 304 PRINTS PR00721 Stomatin signature 128 151 1.98E-27 T 22-04-2016 IPR001972 Stomatin family GO:0016020 YE3058 c98976f306395d5a16acfc0d39b5c01f 304 PRINTS PR00721 Stomatin signature 73 94 1.98E-27 T 22-04-2016 IPR001972 Stomatin family GO:0016020 YE3058 c98976f306395d5a16acfc0d39b5c01f 304 PRINTS PR00721 Stomatin signature 108 125 1.98E-27 T 22-04-2016 IPR001972 Stomatin family GO:0016020 YE3058 c98976f306395d5a16acfc0d39b5c01f 304 PRINTS PR00721 Stomatin signature 171 192 1.98E-27 T 22-04-2016 IPR001972 Stomatin family GO:0016020 YE3058 c98976f306395d5a16acfc0d39b5c01f 304 PRINTS PR00721 Stomatin signature 152 170 1.98E-27 T 22-04-2016 IPR001972 Stomatin family GO:0016020 YE3058 c98976f306395d5a16acfc0d39b5c01f 304 ProSitePatterns PS01270 Band 7 protein family signature. 132 160 - T 22-04-2016 IPR018080 Band 7/stomatin-like, conserved site YE3058 c98976f306395d5a16acfc0d39b5c01f 304 SMART SM00244 18 176 2.8E-59 T 22-04-2016 IPR001107 Band 7 domain YE3058 c98976f306395d5a16acfc0d39b5c01f 304 PANTHER PTHR10264 1 303 2.4E-126 T 22-04-2016 IPR001972 Stomatin family GO:0016020 YE3058 c98976f306395d5a16acfc0d39b5c01f 304 SUPERFAMILY SSF117892 49 183 6.93E-41 T 22-04-2016 IPR001107 Band 7 domain YE0956 24e82c320929aeae91daccb815933e12 201 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 1 166 5.2E-28 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain YE0956 24e82c320929aeae91daccb815933e12 201 Hamap MF_01389 Urease accessory protein UreG [ureG]. 1 192 40.234 T 22-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 YE0956 24e82c320929aeae91daccb815933e12 201 PIRSF PIRSF005624 1 198 7.4E-44 T 22-04-2016 YE0956 24e82c320929aeae91daccb815933e12 201 Gene3D G3DSA:3.40.50.300 2 185 7.0E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0956 24e82c320929aeae91daccb815933e12 201 PANTHER PTHR31715 1 201 1.3E-109 T 22-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 YE0956 24e82c320929aeae91daccb815933e12 201 SUPERFAMILY SSF52540 2 187 1.43E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0956 24e82c320929aeae91daccb815933e12 201 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 1 190 5.0E-75 T 22-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 YE1222 3a44b88182c8b7ab5f3f7b1e1b7a62aa 554 Gene3D G3DSA:3.40.50.970 354 542 4.2E-62 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE1222 3a44b88182c8b7ab5f3f7b1e1b7a62aa 554 PANTHER PTHR18968 2 551 4.2E-234 T 22-04-2016 YE1222 3a44b88182c8b7ab5f3f7b1e1b7a62aa 554 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 200 331 1.1E-21 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 YE1222 3a44b88182c8b7ab5f3f7b1e1b7a62aa 554 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 7 179 6.7E-34 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 YE1222 3a44b88182c8b7ab5f3f7b1e1b7a62aa 554 PANTHER PTHR18968:SF4 2 551 4.2E-234 T 22-04-2016 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme GO:0016831 YE1222 3a44b88182c8b7ab5f3f7b1e1b7a62aa 554 SUPERFAMILY SSF52518 358 545 1.75E-49 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE1222 3a44b88182c8b7ab5f3f7b1e1b7a62aa 554 Gene3D G3DSA:3.40.50.1220 192 346 9.4E-53 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain YE1222 3a44b88182c8b7ab5f3f7b1e1b7a62aa 554 PIRSF PIRSF036565 1 553 2.1E-206 T 22-04-2016 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme GO:0016831 YE1222 3a44b88182c8b7ab5f3f7b1e1b7a62aa 554 SUPERFAMILY SSF52518 6 177 5.4E-42 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE1222 3a44b88182c8b7ab5f3f7b1e1b7a62aa 554 SUPERFAMILY SSF52467 168 336 2.65E-31 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain YE1222 3a44b88182c8b7ab5f3f7b1e1b7a62aa 554 Gene3D G3DSA:3.40.50.970 5 180 6.7E-73 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE1222 3a44b88182c8b7ab5f3f7b1e1b7a62aa 554 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 385 529 4.1E-20 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 YE1726 16cad9671a38f918c695781457b6844d 286 Pfam PF00535 Glycosyl transferase family 2 36 162 2.1E-10 T 22-04-2016 IPR001173 Glycosyltransferase 2-like YE1726 16cad9671a38f918c695781457b6844d 286 Gene3D G3DSA:3.90.550.10 52 202 4.0E-14 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YE1726 16cad9671a38f918c695781457b6844d 286 SUPERFAMILY SSF53448 47 208 4.39E-17 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YE1600 c12311a404b1dd1ddf28f539d2409d10 218 PANTHER PTHR39322 6 218 9.0E-106 T 22-04-2016 YE1600 c12311a404b1dd1ddf28f539d2409d10 218 PANTHER PTHR39322:SF1 6 218 9.0E-106 T 22-04-2016 YE1600 c12311a404b1dd1ddf28f539d2409d10 218 Pfam PF00765 Autoinducer synthase 12 192 3.9E-85 T 22-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YE1600 c12311a404b1dd1ddf28f539d2409d10 218 ProSitePatterns PS00949 Autoinducer synthase family signature. 27 52 - T 22-04-2016 IPR018311 Autoinducer synthesis, conserved site KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YE1600 c12311a404b1dd1ddf28f539d2409d10 218 Gene3D G3DSA:3.40.630.30 5 213 1.8E-58 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE1600 c12311a404b1dd1ddf28f539d2409d10 218 PRINTS PR01549 Autoinducer synthesis protein signature 98 110 1.1E-60 T 22-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YE1600 c12311a404b1dd1ddf28f539d2409d10 218 PRINTS PR01549 Autoinducer synthesis protein signature 66 84 1.1E-60 T 22-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YE1600 c12311a404b1dd1ddf28f539d2409d10 218 PRINTS PR01549 Autoinducer synthesis protein signature 23 42 1.1E-60 T 22-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YE1600 c12311a404b1dd1ddf28f539d2409d10 218 PRINTS PR01549 Autoinducer synthesis protein signature 43 65 1.1E-60 T 22-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YE1600 c12311a404b1dd1ddf28f539d2409d10 218 PRINTS PR01549 Autoinducer synthesis protein signature 145 166 1.1E-60 T 22-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YE1600 c12311a404b1dd1ddf28f539d2409d10 218 PRINTS PR01549 Autoinducer synthesis protein signature 123 144 1.1E-60 T 22-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YE1600 c12311a404b1dd1ddf28f539d2409d10 218 PRINTS PR01549 Autoinducer synthesis protein signature 167 184 1.1E-60 T 22-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 YE1600 c12311a404b1dd1ddf28f539d2409d10 218 SUPERFAMILY SSF55729 5 214 1.03E-39 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE0480 04d2352dc65ba37c2280492ac8512099 578 PANTHER PTHR34597 1 576 4.5E-33 T 22-04-2016 YE0480 04d2352dc65ba37c2280492ac8512099 578 Gene3D G3DSA:3.10.20.310 72 147 7.8E-12 T 22-04-2016 YE0480 04d2352dc65ba37c2280492ac8512099 578 Gene3D G3DSA:2.40.160.50 190 576 4.3E-40 T 22-04-2016 YE0480 04d2352dc65ba37c2280492ac8512099 578 Pfam PF08479 POTRA domain, ShlB-type 73 147 9.3E-17 T 22-04-2016 IPR013686 Polypeptide-transport-associated, ShlB-type YE2859 f21c85ad31cb8845b7056aa548f8e19f 304 Gene3D G3DSA:3.40.190.10 92 177 1.1E-23 T 22-04-2016 YE2859 f21c85ad31cb8845b7056aa548f8e19f 304 Gene3D G3DSA:3.40.190.10 178 262 8.1E-23 T 22-04-2016 YE2859 f21c85ad31cb8845b7056aa548f8e19f 304 Pfam PF03466 LysR substrate binding domain 89 294 3.4E-40 T 22-04-2016 IPR005119 LysR, substrate-binding YE2859 f21c85ad31cb8845b7056aa548f8e19f 304 Gene3D G3DSA:1.10.10.10 1 82 4.3E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2859 f21c85ad31cb8845b7056aa548f8e19f 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.2E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE2859 f21c85ad31cb8845b7056aa548f8e19f 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.2E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE2859 f21c85ad31cb8845b7056aa548f8e19f 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.2E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE2859 f21c85ad31cb8845b7056aa548f8e19f 304 PANTHER PTHR30537:SF21 1 298 7.6E-128 T 22-04-2016 YE2859 f21c85ad31cb8845b7056aa548f8e19f 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.8E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE2859 f21c85ad31cb8845b7056aa548f8e19f 304 SUPERFAMILY SSF53850 89 298 5.43E-41 T 22-04-2016 YE2859 f21c85ad31cb8845b7056aa548f8e19f 304 PANTHER PTHR30537 1 298 7.6E-128 T 22-04-2016 YE2859 f21c85ad31cb8845b7056aa548f8e19f 304 SUPERFAMILY SSF46785 2 112 8.57E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0190 3f6a547f64bd162bf9692df451dcaf3f 106 Pfam PF01491 Frataxin-like domain 1 101 1.3E-28 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 YE0190 3f6a547f64bd162bf9692df451dcaf3f 106 Gene3D G3DSA:3.30.920.10 1 105 2.6E-34 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 YE0190 3f6a547f64bd162bf9692df451dcaf3f 106 SUPERFAMILY SSF55387 1 105 5.06E-39 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 YE0190 3f6a547f64bd162bf9692df451dcaf3f 106 Hamap MF_00142 Protein CyaY [cyaY]. 1 105 29.236 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 YE0190 3f6a547f64bd162bf9692df451dcaf3f 106 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 105 5.8E-42 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 YE0190 3f6a547f64bd162bf9692df451dcaf3f 106 ProSitePatterns PS01344 Frataxin family signature. 50 64 - T 22-04-2016 IPR020895 Frataxin conserved site YE0190 3f6a547f64bd162bf9692df451dcaf3f 106 SMART SM01219 1 106 2.2E-53 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 YE0190 3f6a547f64bd162bf9692df451dcaf3f 106 PANTHER PTHR16821 1 106 4.6E-42 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 YE2482 2f6461623704172f31d026f46142ca21 444 Gene3D G3DSA:3.90.550.10 75 321 5.2E-46 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YE2482 2f6461623704172f31d026f46142ca21 444 TIGRFAM TIGR03937 PgaC_IcaA: poly-beta-1,6 N-acetyl-D-glucosamine synthase 30 438 1.3E-192 T 22-04-2016 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA GO:0008375|GO:0042710 KEGG: 00051+2.4.1.-|KEGG: 00512+2.4.1.-|KEGG: 00513+2.4.1.-|KEGG: 00514+2.4.1.-|KEGG: 00522+2.4.1.-|KEGG: 00533+2.4.1.-|KEGG: 00540+2.4.1.-|KEGG: 00550+2.4.1.-|KEGG: 00561+2.4.1.-|KEGG: 00563+2.4.1.-|KEGG: 00600+2.4.1.-|KEGG: 00601+2.4.1.-|KEGG: 00603+2.4.1.-|KEGG: 00604+2.4.1.-|KEGG: 00906+2.4.1.-|KEGG: 00908+2.4.1.-|KEGG: 00941+2.4.1.-|KEGG: 00942+2.4.1.-|KEGG: 00944+2.4.1.-|KEGG: 00945+2.4.1.-|KEGG: 00965+2.4.1.- YE2482 2f6461623704172f31d026f46142ca21 444 PANTHER PTHR10859 60 425 6.1E-175 T 22-04-2016 YE2482 2f6461623704172f31d026f46142ca21 444 PANTHER PTHR10859:SF92 60 425 6.1E-175 T 22-04-2016 YE2482 2f6461623704172f31d026f46142ca21 444 Pfam PF00535 Glycosyl transferase family 2 78 245 1.3E-35 T 22-04-2016 IPR001173 Glycosyltransferase 2-like YE2482 2f6461623704172f31d026f46142ca21 444 SUPERFAMILY SSF53448 66 345 1.63E-63 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YE1055 75b93510a0e78e3379dc2083a5576490 257 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 240 1.2E-87 T 22-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 YE1055 75b93510a0e78e3379dc2083a5576490 257 Gene3D G3DSA:3.40.1280.10 4 175 2.0E-32 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YE1055 75b93510a0e78e3379dc2083a5576490 257 PIRSF PIRSF004808 1 246 1.8E-76 T 22-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 YE1055 75b93510a0e78e3379dc2083a5576490 257 Pfam PF00588 SpoU rRNA Methylase family 5 154 3.1E-34 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 YE1055 75b93510a0e78e3379dc2083a5576490 257 PANTHER PTHR12029 3 180 4.7E-48 T 22-04-2016 YE1055 75b93510a0e78e3379dc2083a5576490 257 SUPERFAMILY SSF75217 3 173 3.79E-39 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases YE3087 f7cb3decde64593d3c7377e939a73d87 261 Gene3D G3DSA:3.90.550.10 5 260 7.7E-67 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YE3087 f7cb3decde64593d3c7377e939a73d87 261 TIGRFAM TIGR02623 G1P_cyt_trans: glucose-1-phosphate cytidylyltransferase 5 260 6.5E-147 T 22-04-2016 IPR013446 Glucose-1-phosphate cytidylyltransferase GO:0047343 KEGG: 00500+2.7.7.33|KEGG: 00520+2.7.7.33|MetaCyc: PWY-5833|MetaCyc: PWY-5940|UniPathway: UPA00055|UniPathway: UPA00281 YE3087 f7cb3decde64593d3c7377e939a73d87 261 PANTHER PTHR22572 6 261 5.6E-181 T 22-04-2016 YE3087 f7cb3decde64593d3c7377e939a73d87 261 Pfam PF00483 Nucleotidyl transferase 6 205 1.2E-17 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 YE3087 f7cb3decde64593d3c7377e939a73d87 261 PANTHER PTHR22572:SF16 6 261 5.6E-181 T 22-04-2016 IPR013446 Glucose-1-phosphate cytidylyltransferase GO:0047343 KEGG: 00500+2.7.7.33|KEGG: 00520+2.7.7.33|MetaCyc: PWY-5833|MetaCyc: PWY-5940|UniPathway: UPA00055|UniPathway: UPA00281 YE3087 f7cb3decde64593d3c7377e939a73d87 261 SUPERFAMILY SSF53448 4 261 7.72E-69 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YE0757 93fc1f4b2d8cd4b1b06f7e8eaa8040ca 244 SUPERFAMILY SSF52402 22 208 7.99E-54 T 22-04-2016 YE0757 93fc1f4b2d8cd4b1b06f7e8eaa8040ca 244 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 22 242 8.8E-94 T 22-04-2016 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 YE0757 93fc1f4b2d8cd4b1b06f7e8eaa8040ca 244 PANTHER PTHR23293:SF5 5 243 6.5E-94 T 22-04-2016 YE0757 93fc1f4b2d8cd4b1b06f7e8eaa8040ca 244 PIRSF PIRSF000857 3 244 5.4E-55 T 22-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 YE0757 93fc1f4b2d8cd4b1b06f7e8eaa8040ca 244 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 9 243 39.534 T 22-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 YE0757 93fc1f4b2d8cd4b1b06f7e8eaa8040ca 244 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 33 243 5.0E-88 T 22-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 YE0757 93fc1f4b2d8cd4b1b06f7e8eaa8040ca 244 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 48 219 1.3E-49 T 22-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 YE0757 93fc1f4b2d8cd4b1b06f7e8eaa8040ca 244 PANTHER PTHR23293 5 243 6.5E-94 T 22-04-2016 YE0757 93fc1f4b2d8cd4b1b06f7e8eaa8040ca 244 Gene3D G3DSA:3.40.50.620 10 216 1.8E-62 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YE0836 bf186e0bb528daa850f0329b3f4398c0 188 Gene3D G3DSA:3.40.50.1000 4 18 4.3E-36 T 22-04-2016 IPR023214 HAD-like domain YE0836 bf186e0bb528daa850f0329b3f4398c0 188 Gene3D G3DSA:3.40.50.1000 90 185 4.3E-36 T 22-04-2016 IPR023214 HAD-like domain YE0836 bf186e0bb528daa850f0329b3f4398c0 188 SUPERFAMILY SSF56784 4 185 3.47E-45 T 22-04-2016 IPR023214 HAD-like domain YE0836 bf186e0bb528daa850f0329b3f4398c0 188 PANTHER PTHR18901:SF29 1 186 1.4E-73 T 22-04-2016 YE0836 bf186e0bb528daa850f0329b3f4398c0 188 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 129 145 5.5E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YE0836 bf186e0bb528daa850f0329b3f4398c0 188 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 5 16 5.5E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YE0836 bf186e0bb528daa850f0329b3f4398c0 188 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 105 164 1.2E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YE0836 bf186e0bb528daa850f0329b3f4398c0 188 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 183 2.6E-30 T 22-04-2016 IPR023214 HAD-like domain YE0836 bf186e0bb528daa850f0329b3f4398c0 188 PANTHER PTHR18901 1 186 1.4E-73 T 22-04-2016 YE0836 bf186e0bb528daa850f0329b3f4398c0 188 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 122 183 7.9E-15 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YE0836 bf186e0bb528daa850f0329b3f4398c0 188 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 5 185 1.3E-59 T 22-04-2016 IPR010976 Beta-phosphoglucomutase hydrolase YE0836 bf186e0bb528daa850f0329b3f4398c0 188 Gene3D G3DSA:1.10.150.240 19 83 8.3E-7 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 YE0842 23dd52f9bbf854312d1f7f537a76dbea 453 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 3.7E-75 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 YE0842 23dd52f9bbf854312d1f7f537a76dbea 453 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 34.868 T 22-04-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 YE0842 23dd52f9bbf854312d1f7f537a76dbea 453 Gene3D G3DSA:1.20.120.140 2 88 4.8E-36 T 22-04-2016 YE0842 23dd52f9bbf854312d1f7f537a76dbea 453 PANTHER PTHR11564 1 434 1.1E-277 T 22-04-2016 YE0842 23dd52f9bbf854312d1f7f537a76dbea 453 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 YE0842 23dd52f9bbf854312d1f7f537a76dbea 453 SUPERFAMILY SSF52540 42 354 4.87E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0842 23dd52f9bbf854312d1f7f537a76dbea 453 Gene3D G3DSA:1.10.260.30 329 431 2.5E-40 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 YE0842 23dd52f9bbf854312d1f7f537a76dbea 453 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 2.7E-179 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 YE0842 23dd52f9bbf854312d1f7f537a76dbea 453 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 3.4E-23 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 YE0842 23dd52f9bbf854312d1f7f537a76dbea 453 PANTHER PTHR11564:SF7 1 434 1.1E-277 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 YE0842 23dd52f9bbf854312d1f7f537a76dbea 453 SMART SM00962 100 296 1.7E-116 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 YE0842 23dd52f9bbf854312d1f7f537a76dbea 453 SMART SM00963 1 86 1.5E-37 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 YE0842 23dd52f9bbf854312d1f7f537a76dbea 453 Gene3D G3DSA:3.40.50.300 94 297 3.2E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0842 23dd52f9bbf854312d1f7f537a76dbea 453 Pfam PF02978 Signal peptide binding domain 329 427 1.1E-32 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 YE0842 23dd52f9bbf854312d1f7f537a76dbea 453 SUPERFAMILY SSF47446 298 431 6.02E-46 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 YE0842 23dd52f9bbf854312d1f7f537a76dbea 453 SMART SM00382 99 247 4.9E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain YE0364 fde3fe1921c08b9903fe9f4a47091c11 607 Gene3D G3DSA:3.50.50.60 3 233 7.1E-105 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE0364 fde3fe1921c08b9903fe9f4a47091c11 607 Gene3D G3DSA:3.50.50.60 353 415 7.1E-105 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE0364 fde3fe1921c08b9903fe9f4a47091c11 607 SUPERFAMILY SSF46977 444 583 1.96E-44 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 YE0364 fde3fe1921c08b9903fe9f4a47091c11 607 Gene3D G3DSA:4.10.80.40 543 577 1.9E-17 T 22-04-2016 YE0364 fde3fe1921c08b9903fe9f4a47091c11 607 Pfam PF00890 FAD binding domain 7 397 3.2E-114 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain YE0364 fde3fe1921c08b9903fe9f4a47091c11 607 Gene3D G3DSA:1.20.58.100 427 537 3.0E-37 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 YE0364 fde3fe1921c08b9903fe9f4a47091c11 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 375 382 2.1E-5 T 22-04-2016 YE0364 fde3fe1921c08b9903fe9f4a47091c11 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 2.1E-5 T 22-04-2016 YE0364 fde3fe1921c08b9903fe9f4a47091c11 607 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 6.5E-10 T 22-04-2016 YE0364 fde3fe1921c08b9903fe9f4a47091c11 607 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 360 382 6.5E-10 T 22-04-2016 YE0364 fde3fe1921c08b9903fe9f4a47091c11 607 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 581 9.2E-244 T 22-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 YE0364 fde3fe1921c08b9903fe9f4a47091c11 607 Gene3D G3DSA:3.90.700.10 234 352 9.4E-37 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain YE0364 fde3fe1921c08b9903fe9f4a47091c11 607 SUPERFAMILY SSF51905 3 250 1.73E-70 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE0364 fde3fe1921c08b9903fe9f4a47091c11 607 SUPERFAMILY SSF51905 361 417 1.73E-70 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE0364 fde3fe1921c08b9903fe9f4a47091c11 607 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 581 1.3E-37 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 YE0364 fde3fe1921c08b9903fe9f4a47091c11 607 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 3 582 0.0 T 22-04-2016 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 YE0364 fde3fe1921c08b9903fe9f4a47091c11 607 PANTHER PTHR11632 1 584 0.0 T 22-04-2016 YE0364 fde3fe1921c08b9903fe9f4a47091c11 607 SUPERFAMILY SSF56425 227 358 2.99E-43 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain YE0364 fde3fe1921c08b9903fe9f4a47091c11 607 PIRSF PIRSF000171 1 560 5.0E-41 T 22-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit YE0364 fde3fe1921c08b9903fe9f4a47091c11 607 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 22-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 YE0364 fde3fe1921c08b9903fe9f4a47091c11 607 PANTHER PTHR11632:SF50 1 584 0.0 T 22-04-2016 YE2074 6066522ce275781d8c923d4d8bdb1f71 172 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 137 143 - T 22-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 YE2074 6066522ce275781d8c923d4d8bdb1f71 172 Gene3D G3DSA:1.10.10.10 86 168 2.3E-37 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2074 6066522ce275781d8c923d4d8bdb1f71 172 PANTHER PTHR10815 1 172 2.2E-60 T 22-04-2016 YE2074 6066522ce275781d8c923d4d8bdb1f71 172 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 88 167 1.4E-34 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 YE2074 6066522ce275781d8c923d4d8bdb1f71 172 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 9 83 2.8E-12 T 22-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 YE2074 6066522ce275781d8c923d4d8bdb1f71 172 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 87 166 4.0E-38 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 YE2074 6066522ce275781d8c923d4d8bdb1f71 172 SUPERFAMILY SSF53155 7 92 6.67E-6 T 22-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 YE2074 6066522ce275781d8c923d4d8bdb1f71 172 SUPERFAMILY SSF46767 86 169 3.53E-34 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 YE2074 6066522ce275781d8c923d4d8bdb1f71 172 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 1 169 37.326 T 22-04-2016 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 YE2074 6066522ce275781d8c923d4d8bdb1f71 172 PANTHER PTHR10815:SF5 1 172 2.2E-60 T 22-04-2016 YE1318 1e9563b3b6940f2f7b12e3d321010e56 260 SMART SM00062 27 256 4.2E-72 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YE1318 1e9563b3b6940f2f7b12e3d321010e56 260 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 4 253 1.5E-94 T 22-04-2016 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 YE1318 1e9563b3b6940f2f7b12e3d321010e56 260 PANTHER PTHR18966 24 253 4.8E-147 T 22-04-2016 YE1318 1e9563b3b6940f2f7b12e3d321010e56 260 Gene3D G3DSA:3.40.190.10 26 113 1.8E-43 T 22-04-2016 YE1318 1e9563b3b6940f2f7b12e3d321010e56 260 Gene3D G3DSA:3.40.190.10 215 257 1.8E-43 T 22-04-2016 YE1318 1e9563b3b6940f2f7b12e3d321010e56 260 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 254 9.1E-62 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YE1318 1e9563b3b6940f2f7b12e3d321010e56 260 Gene3D G3DSA:3.40.190.10 115 212 1.5E-29 T 22-04-2016 YE1318 1e9563b3b6940f2f7b12e3d321010e56 260 SUPERFAMILY SSF53850 4 257 6.05E-65 T 22-04-2016 YE1318 1e9563b3b6940f2f7b12e3d321010e56 260 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 50 63 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 YE1318 1e9563b3b6940f2f7b12e3d321010e56 260 PANTHER PTHR18966:SF237 24 253 4.8E-147 T 22-04-2016 YE2120 be68362f9d5cddc7f1e9cd9ac5e59aba 75 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 1 74 2.8E-36 T 22-04-2016 IPR009554 Phage shock protein B GO:0006355|GO:0009271 YE2120 be68362f9d5cddc7f1e9cd9ac5e59aba 75 Pfam PF06667 Phage shock protein B 4 74 6.9E-35 T 22-04-2016 IPR009554 Phage shock protein B GO:0006355|GO:0009271 YE1615 90ecafd0c413994efc4d95c09fe822bd 244 PANTHER PTHR11938 31 227 3.1E-85 T 22-04-2016 YE1615 90ecafd0c413994efc4d95c09fe822bd 244 Gene3D G3DSA:3.30.70.20 108 151 2.2E-24 T 22-04-2016 YE1615 90ecafd0c413994efc4d95c09fe822bd 244 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 132 143 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YE1615 90ecafd0c413994efc4d95c09fe822bd 244 Pfam PF13247 4Fe-4S dicluster domain 94 187 6.6E-30 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YE1615 90ecafd0c413994efc4d95c09fe822bd 244 PANTHER PTHR11938:SF86 31 227 3.1E-85 T 22-04-2016 YE1615 90ecafd0c413994efc4d95c09fe822bd 244 Gene3D G3DSA:3.30.70.20 152 232 1.6E-25 T 22-04-2016 YE1615 90ecafd0c413994efc4d95c09fe822bd 244 Gene3D G3DSA:3.30.70.20 43 107 8.4E-15 T 22-04-2016 YE1615 90ecafd0c413994efc4d95c09fe822bd 244 SUPERFAMILY SSF54862 40 222 1.26E-65 T 22-04-2016 YE0063 9a2db7cbfb0a6acc8311f6b96b1e1696 222 PANTHER PTHR30471 1 222 7.4E-148 T 22-04-2016 YE0063 9a2db7cbfb0a6acc8311f6b96b1e1696 222 SUPERFAMILY SSF102712 150 188 5.49E-5 T 22-04-2016 YE0063 9a2db7cbfb0a6acc8311f6b96b1e1696 222 PANTHER PTHR30471:SF5 1 222 7.4E-148 T 22-04-2016 YE0063 9a2db7cbfb0a6acc8311f6b96b1e1696 222 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 171 176 - T 22-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site YE0063 9a2db7cbfb0a6acc8311f6b96b1e1696 222 Hamap MF_00018 UPF0758 protein YicR [yicR]. 2 222 53.207 T 22-04-2016 IPR022820 Uncharacterised protein family UPF0758, YicR subfamily YE0063 9a2db7cbfb0a6acc8311f6b96b1e1696 222 TIGRFAM TIGR00608 radc: DNA repair protein RadC 10 222 2.5E-84 T 22-04-2016 IPR001405 RadC protein YE0063 9a2db7cbfb0a6acc8311f6b96b1e1696 222 Gene3D G3DSA:3.40.140.10 99 222 2.1E-49 T 22-04-2016 YE0063 9a2db7cbfb0a6acc8311f6b96b1e1696 222 Pfam PF04002 RadC-like JAB domain 102 220 1.1E-43 T 22-04-2016 IPR025657 RadC-like JAB domain YE0063 9a2db7cbfb0a6acc8311f6b96b1e1696 222 SUPERFAMILY SSF47781 16 85 4.89E-10 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 YE3985 3dc5b4178e971a2136ab0a74d894ba1a 304 Hamap MF_00117 33 kDa chaperonin [hslO]. 14 296 33.027 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 YE3985 3dc5b4178e971a2136ab0a74d894ba1a 304 Gene3D G3DSA:3.55.30.10 13 188 2.4E-66 T 22-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 YE3985 3dc5b4178e971a2136ab0a74d894ba1a 304 PANTHER PTHR30111:SF1 14 300 6.5E-92 T 22-04-2016 YE3985 3dc5b4178e971a2136ab0a74d894ba1a 304 Gene3D G3DSA:3.90.1280.10 238 292 3.7E-24 T 22-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 YE3985 3dc5b4178e971a2136ab0a74d894ba1a 304 PANTHER PTHR30111 14 300 6.5E-92 T 22-04-2016 YE3985 3dc5b4178e971a2136ab0a74d894ba1a 304 Gene3D G3DSA:1.10.287.480 190 237 9.1E-26 T 22-04-2016 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain YE3985 3dc5b4178e971a2136ab0a74d894ba1a 304 PIRSF PIRSF005261 4 296 7.5E-76 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 YE3985 3dc5b4178e971a2136ab0a74d894ba1a 304 SUPERFAMILY SSF118352 237 293 2.75E-20 T 22-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 YE3985 3dc5b4178e971a2136ab0a74d894ba1a 304 SUPERFAMILY SSF64397 14 244 9.42E-75 T 22-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 YE3985 3dc5b4178e971a2136ab0a74d894ba1a 304 Pfam PF01430 Hsp33 protein 15 285 2.5E-87 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 YE3899 f6d97c4f5674721605c1c4c9ef0497c7 206 Pfam PF01479 S4 domain 97 143 7.0E-18 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YE3899 f6d97c4f5674721605c1c4c9ef0497c7 206 PANTHER PTHR11831 1 206 3.1E-95 T 22-04-2016 IPR022801 Ribosomal protein S4/S9 YE3899 f6d97c4f5674721605c1c4c9ef0497c7 206 PANTHER PTHR11831:SF4 1 206 3.1E-95 T 22-04-2016 YE3899 f6d97c4f5674721605c1c4c9ef0497c7 206 SMART SM00363 96 160 8.2E-20 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YE3899 f6d97c4f5674721605c1c4c9ef0497c7 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 8.6E-86 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 YE3899 f6d97c4f5674721605c1c4c9ef0497c7 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.196 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 YE3899 f6d97c4f5674721605c1c4c9ef0497c7 206 SMART SM01390 3 95 6.1E-50 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 YE3899 f6d97c4f5674721605c1c4c9ef0497c7 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 8.9E-31 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 YE3899 f6d97c4f5674721605c1c4c9ef0497c7 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 22-04-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 YE3899 f6d97c4f5674721605c1c4c9ef0497c7 206 SUPERFAMILY SSF55174 3 206 6.54E-72 T 22-04-2016 YE3899 f6d97c4f5674721605c1c4c9ef0497c7 206 Gene3D G3DSA:3.10.290.10 102 190 2.7E-32 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YE3899 f6d97c4f5674721605c1c4c9ef0497c7 206 Gene3D G3DSA:1.10.1050.10 1 101 9.6E-42 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 YE0567 f7dd5fb6843f4a396d6f432af22d4458 417 Gene3D G3DSA:3.40.1090.10 25 74 1.6E-4 T 22-04-2016 YE0567 f7dd5fb6843f4a396d6f432af22d4458 417 Pfam PF01734 Patatin-like phospholipase 28 196 6.0E-21 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 YE0567 f7dd5fb6843f4a396d6f432af22d4458 417 PANTHER PTHR14226 1 336 5.6E-155 T 22-04-2016 YE0567 f7dd5fb6843f4a396d6f432af22d4458 417 SUPERFAMILY SSF52151 23 295 4.45E-45 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 YE0567 f7dd5fb6843f4a396d6f432af22d4458 417 PANTHER PTHR14226:SF25 1 336 5.6E-155 T 22-04-2016 YE1225 a087b245fad9c065446d0036ffa79e0f 323 TIGRFAM TIGR00749 glk: glucokinase 6 310 2.1E-141 T 22-04-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 YE1225 a087b245fad9c065446d0036ffa79e0f 323 SUPERFAMILY SSF53067 4 317 2.79E-64 T 22-04-2016 YE1225 a087b245fad9c065446d0036ffa79e0f 323 Gene3D G3DSA:3.40.367.20 100 299 4.3E-77 T 22-04-2016 YE1225 a087b245fad9c065446d0036ffa79e0f 323 Pfam PF02685 Glucokinase 6 315 1.5E-125 T 22-04-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 YE1225 a087b245fad9c065446d0036ffa79e0f 323 PANTHER PTHR30514 1 320 1.0E-124 T 22-04-2016 YE1225 a087b245fad9c065446d0036ffa79e0f 323 Hamap MF_00524 Glucokinase [glk]. 2 316 39.884 T 22-04-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 YE1225 a087b245fad9c065446d0036ffa79e0f 323 PANTHER PTHR30514:SF0 1 320 1.0E-124 T 22-04-2016 YE1632 26ad28f1da5dd5f7d3a37feb2df48445 344 PIRSF PIRSF002465 2 344 2.0E-125 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 YE1632 26ad28f1da5dd5f7d3a37feb2df48445 344 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 344 142.813 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 YE1632 26ad28f1da5dd5f7d3a37feb2df48445 344 PANTHER PTHR30100 2 344 1.4E-145 T 22-04-2016 YE1632 26ad28f1da5dd5f7d3a37feb2df48445 344 Pfam PF02504 Fatty acid synthesis protein 5 331 1.1E-117 T 22-04-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 YE1632 26ad28f1da5dd5f7d3a37feb2df48445 344 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 342 1.8E-134 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 YE1632 26ad28f1da5dd5f7d3a37feb2df48445 344 SUPERFAMILY SSF53659 5 340 2.47E-102 T 22-04-2016 YE1632 26ad28f1da5dd5f7d3a37feb2df48445 344 Gene3D G3DSA:3.40.718.10 4 339 4.2E-136 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 YE1632 26ad28f1da5dd5f7d3a37feb2df48445 344 PANTHER PTHR30100:SF1 2 344 1.4E-145 T 22-04-2016 YE2550 eea151d0605ab1438bf5d29ca7268e78 326 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 139 7.7E-23 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YE2550 eea151d0605ab1438bf5d29ca7268e78 326 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 198 7.0E-68 T 22-04-2016 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 YE2550 eea151d0605ab1438bf5d29ca7268e78 326 PANTHER PTHR30244:SF5 1 325 4.3E-94 T 22-04-2016 YE2550 eea151d0605ab1438bf5d29ca7268e78 326 SUPERFAMILY SSF64518 1 324 1.7E-57 T 22-04-2016 YE2550 eea151d0605ab1438bf5d29ca7268e78 326 Gene3D G3DSA:1.20.1330.10 78 168 2.4E-16 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YE2550 eea151d0605ab1438bf5d29ca7268e78 326 Gene3D G3DSA:1.20.1330.10 230 268 2.4E-16 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YE2550 eea151d0605ab1438bf5d29ca7268e78 326 PANTHER PTHR30244 1 325 4.3E-94 T 22-04-2016 YE2283 c7b4d48160342ebd1149ced3e21f25f2 239 SMART SM00345 12 71 5.9E-23 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YE2283 c7b4d48160342ebd1149ced3e21f25f2 239 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 239 162.458 T 22-04-2016 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 YE2283 c7b4d48160342ebd1149ced3e21f25f2 239 Pfam PF07840 FadR C-terminal domain 72 234 9.8E-74 T 22-04-2016 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 YE2283 c7b4d48160342ebd1149ced3e21f25f2 239 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 236 1.8E-122 T 22-04-2016 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 YE2283 c7b4d48160342ebd1149ced3e21f25f2 239 Gene3D G3DSA:1.20.120.530 80 236 1.2E-65 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal YE2283 c7b4d48160342ebd1149ced3e21f25f2 239 PANTHER PTHR11751:SF402 13 97 3.1E-58 T 22-04-2016 YE2283 c7b4d48160342ebd1149ced3e21f25f2 239 Gene3D G3DSA:1.10.10.10 8 76 3.2E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2283 c7b4d48160342ebd1149ced3e21f25f2 239 PANTHER PTHR11751 13 97 3.1E-58 T 22-04-2016 YE2283 c7b4d48160342ebd1149ced3e21f25f2 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 2.7E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YE2283 c7b4d48160342ebd1149ced3e21f25f2 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 2.7E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YE2283 c7b4d48160342ebd1149ced3e21f25f2 239 SUPERFAMILY SSF48008 79 230 9.02E-66 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal YE2283 c7b4d48160342ebd1149ced3e21f25f2 239 SUPERFAMILY SSF46785 11 87 2.85E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2283 c7b4d48160342ebd1149ced3e21f25f2 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 71 5.6E-20 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YE1943 6eebcee95f3db7fc305235e296506489 392 SMART SM00612 102 156 8.3E-4 T 22-04-2016 IPR006652 Kelch repeat type 1 GO:0005515 YE1943 6eebcee95f3db7fc305235e296506489 392 TIGRFAM TIGR03547 muta_rot_YjhT: mutatrotase, YjhT family 38 385 1.2E-148 T 22-04-2016 IPR019936 Mutatrotase, YjhT-like YE1943 6eebcee95f3db7fc305235e296506489 392 Pfam PF01344 Kelch motif 91 140 7.2E-10 T 22-04-2016 IPR006652 Kelch repeat type 1 GO:0005515 YE1943 6eebcee95f3db7fc305235e296506489 392 PANTHER PTHR23244 35 163 1.0E-40 T 22-04-2016 YE1943 6eebcee95f3db7fc305235e296506489 392 PANTHER PTHR23244 198 373 1.0E-40 T 22-04-2016 YE1943 6eebcee95f3db7fc305235e296506489 392 SUPERFAMILY SSF117281 54 168 1.57E-31 T 22-04-2016 YE1943 6eebcee95f3db7fc305235e296506489 392 SUPERFAMILY SSF117281 203 381 1.57E-31 T 22-04-2016 YE1943 6eebcee95f3db7fc305235e296506489 392 PANTHER PTHR23244:SF303 35 163 1.0E-40 T 22-04-2016 YE1943 6eebcee95f3db7fc305235e296506489 392 PANTHER PTHR23244:SF303 198 373 1.0E-40 T 22-04-2016 YE1943 6eebcee95f3db7fc305235e296506489 392 Gene3D G3DSA:2.120.10.80 210 379 5.3E-31 T 22-04-2016 IPR015915 Kelch-type beta propeller GO:0005515 YE1943 6eebcee95f3db7fc305235e296506489 392 Gene3D G3DSA:2.120.10.80 54 178 5.3E-31 T 22-04-2016 IPR015915 Kelch-type beta propeller GO:0005515 YE1943 6eebcee95f3db7fc305235e296506489 392 Hamap MF_01195 N-acetylneuraminate epimerase [nanM]. 17 392 45.119 T 22-04-2016 IPR019936 Mutatrotase, YjhT-like YE0513 0d5c2c67d415f59adcc1073a2916b36f 136 PANTHER PTHR23091 40 120 2.0E-16 T 22-04-2016 YE0513 0d5c2c67d415f59adcc1073a2916b36f 136 Pfam PF00583 Acetyltransferase (GNAT) family 43 115 2.0E-14 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YE0513 0d5c2c67d415f59adcc1073a2916b36f 136 PANTHER PTHR23091:SF259 40 120 2.0E-16 T 22-04-2016 YE0513 0d5c2c67d415f59adcc1073a2916b36f 136 Gene3D G3DSA:3.40.630.30 38 135 2.5E-28 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE0513 0d5c2c67d415f59adcc1073a2916b36f 136 SUPERFAMILY SSF55729 33 135 3.22E-27 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE0265 b484b2e1d9ed750b944b941772070289 498 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 9 458 1.2E-186 T 22-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 YE0265 b484b2e1d9ed750b944b941772070289 498 Gene3D G3DSA:1.20.5.570 458 495 3.2E-19 T 22-04-2016 YE0265 b484b2e1d9ed750b944b941772070289 498 SUPERFAMILY SSF143968 326 489 1.26E-68 T 22-04-2016 YE0265 b484b2e1d9ed750b944b941772070289 498 PANTHER PTHR30108:SF1 1 497 2.2E-292 T 22-04-2016 YE0265 b484b2e1d9ed750b944b941772070289 498 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 14 434 5.0E-172 T 22-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 YE0265 b484b2e1d9ed750b944b941772070289 498 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 4 490 73.764 T 22-04-2016 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 YE0265 b484b2e1d9ed750b944b941772070289 498 SUPERFAMILY SSF50475 6 325 1.33E-127 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 YE0265 b484b2e1d9ed750b944b941772070289 498 PANTHER PTHR30108 1 497 2.2E-292 T 22-04-2016 YE0265 b484b2e1d9ed750b944b941772070289 498 Gene3D G3DSA:3.40.1670.10 340 457 1.7E-55 T 22-04-2016 YE0917 655cd482bb8e6d9764c9e55912033231 260 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 48 251 5.2E-9 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase YE0917 655cd482bb8e6d9764c9e55912033231 260 SUPERFAMILY SSF56219 43 258 2.62E-25 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase YE0917 655cd482bb8e6d9764c9e55912033231 260 Gene3D G3DSA:3.60.10.10 43 259 3.0E-8 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase YE0917 655cd482bb8e6d9764c9e55912033231 260 Hamap MF_01119 UPF0294 protein YafD [yafD]. 1 259 50.912 T 22-04-2016 IPR022958 Uncharacterised protein family UPF0294 YE0672 74b70a766d5bfd694c94cfe4b2414001 355 Gene3D G3DSA:3.40.50.2000 4 196 5.1E-76 T 22-04-2016 YE0672 74b70a766d5bfd694c94cfe4b2414001 355 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 185 343 8.8E-36 T 22-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 YE0672 74b70a766d5bfd694c94cfe4b2414001 355 PANTHER PTHR21015:SF22 1 350 2.0E-135 T 22-04-2016 YE0672 74b70a766d5bfd694c94cfe4b2414001 355 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 8 354 35.574 T 22-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 YE0672 74b70a766d5bfd694c94cfe4b2414001 355 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 9 145 3.9E-48 T 22-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 YE0672 74b70a766d5bfd694c94cfe4b2414001 355 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 348 1.2E-113 T 22-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 YE0672 74b70a766d5bfd694c94cfe4b2414001 355 SUPERFAMILY SSF53756 6 352 5.76E-128 T 22-04-2016 YE0672 74b70a766d5bfd694c94cfe4b2414001 355 Gene3D G3DSA:3.40.50.2000 255 332 7.4E-6 T 22-04-2016 YE0672 74b70a766d5bfd694c94cfe4b2414001 355 PANTHER PTHR21015 1 350 2.0E-135 T 22-04-2016 YE1228 fac4811c1398ef465c8ce80e513b5cbc 566 SUPERFAMILY SSF55874 413 549 1.7E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE1228 fac4811c1398ef465c8ce80e513b5cbc 566 PANTHER PTHR34220 1 557 9.9E-244 T 22-04-2016 YE1228 fac4811c1398ef465c8ce80e513b5cbc 566 SUPERFAMILY SSF55781 226 345 1.68E-6 T 22-04-2016 IPR029016 GAF domain-like YE1228 fac4811c1398ef465c8ce80e513b5cbc 566 Pfam PF06580 Histidine kinase 359 437 4.4E-25 T 22-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 YE1228 fac4811c1398ef465c8ce80e513b5cbc 566 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 455 550 3.8E-7 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE1228 fac4811c1398ef465c8ce80e513b5cbc 566 Gene3D G3DSA:3.30.565.10 406 550 6.4E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE1228 fac4811c1398ef465c8ce80e513b5cbc 566 PANTHER PTHR34220:SF2 1 557 9.9E-244 T 22-04-2016 YE1228 fac4811c1398ef465c8ce80e513b5cbc 566 Pfam PF07694 5TMR of 5TMR-LYT 28 193 6.8E-46 T 22-04-2016 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 YE1228 fac4811c1398ef465c8ce80e513b5cbc 566 SMART SM00387 451 553 1.5E-5 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE0523 116bb3c82f3922e7e3363523972ea54d 96 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 4.7E-18 T 22-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain YE0523 116bb3c82f3922e7e3363523972ea54d 96 Gene3D G3DSA:3.30.70.900 1 90 1.8E-28 T 22-04-2016 YE0523 116bb3c82f3922e7e3363523972ea54d 96 SUPERFAMILY SSF54909 1 91 7.16E-25 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel YE0523 116bb3c82f3922e7e3363523972ea54d 96 PANTHER PTHR33336 1 96 1.2E-54 T 22-04-2016 YE0523 116bb3c82f3922e7e3363523972ea54d 96 PANTHER PTHR33336:SF1 1 96 1.2E-54 T 22-04-2016 YE2989 70bad51a05bfc547d837d60cc7bd204c 525 SUPERFAMILY SSF56317 216 491 1.24E-37 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 YE2989 70bad51a05bfc547d837d60cc7bd204c 525 PANTHER PTHR38686 3 515 2.7E-175 T 22-04-2016 YE2989 70bad51a05bfc547d837d60cc7bd204c 525 Gene3D G3DSA:3.60.110.10 216 488 1.7E-19 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 YE2989 70bad51a05bfc547d837d60cc7bd204c 525 Pfam PF00795 Carbon-nitrogen hydrolase 224 476 3.0E-36 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 YE2989 70bad51a05bfc547d837d60cc7bd204c 525 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 63 458 1.0E-104 T 22-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 YE2989 70bad51a05bfc547d837d60cc7bd204c 525 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 10 496 24.327 T 22-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 YE0676 fe46aa74b1be92432285782c6bf33bd4 418 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 3.0E-30 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 YE0676 fe46aa74b1be92432285782c6bf33bd4 418 Gene3D G3DSA:3.30.420.40 169 209 2.2E-6 T 22-04-2016 YE0676 fe46aa74b1be92432285782c6bf33bd4 418 PANTHER PTHR32432 1 413 6.8E-185 T 22-04-2016 YE0676 fe46aa74b1be92432285782c6bf33bd4 418 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 418 29.689 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 YE0676 fe46aa74b1be92432285782c6bf33bd4 418 SUPERFAMILY SSF53067 198 384 2.13E-47 T 22-04-2016 YE0676 fe46aa74b1be92432285782c6bf33bd4 418 PIRSF PIRSF003101 1 418 9.6E-154 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 YE0676 fe46aa74b1be92432285782c6bf33bd4 418 PANTHER PTHR32432:SF4 1 413 6.8E-185 T 22-04-2016 YE0676 fe46aa74b1be92432285782c6bf33bd4 418 Gene3D G3DSA:3.30.420.40 7 138 2.5E-33 T 22-04-2016 YE0676 fe46aa74b1be92432285782c6bf33bd4 418 SMART SM00842 10 196 1.3E-96 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 YE0676 fe46aa74b1be92432285782c6bf33bd4 418 SUPERFAMILY SSF53067 8 221 7.12E-62 T 22-04-2016 YE0676 fe46aa74b1be92432285782c6bf33bd4 418 Gene3D G3DSA:3.30.420.40 298 359 1.2E-29 T 22-04-2016 YE0676 fe46aa74b1be92432285782c6bf33bd4 418 Gene3D G3DSA:3.30.420.40 210 234 1.2E-29 T 22-04-2016 YE0676 fe46aa74b1be92432285782c6bf33bd4 418 Pfam PF14450 Cell division protein FtsA 207 381 1.3E-24 T 22-04-2016 YE0676 fe46aa74b1be92432285782c6bf33bd4 418 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 1.1E-161 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 YE0676 fe46aa74b1be92432285782c6bf33bd4 418 Gene3D G3DSA:3.90.640.10 235 297 5.1E-18 T 22-04-2016 YE2336 605d22420bbaf6944a7337eb46366a2c 162 Pfam PF06530 Phage antitermination protein Q 16 99 8.0E-10 T 22-04-2016 IPR010534 Bacteriophage 933W, GpQ GO:0003677|GO:0060567 YE0647 2a63b2cdde8e48a109fb37f96cc9a263 89 PIRSF PIRSF003108 4 89 3.5E-18 T 22-04-2016 IPR026262 Antitoxin DinJ GO:0000986|GO:0015643|GO:0044010 YE0647 2a63b2cdde8e48a109fb37f96cc9a263 89 PANTHER PTHR38781 5 89 8.0E-29 T 22-04-2016 YE0647 2a63b2cdde8e48a109fb37f96cc9a263 89 Pfam PF04221 RelB antitoxin 9 74 9.5E-13 T 22-04-2016 IPR007337 RelB antitoxin/Antitoxin DinJ YE0647 2a63b2cdde8e48a109fb37f96cc9a263 89 PANTHER PTHR38781:SF1 5 89 8.0E-29 T 22-04-2016 YE0647 2a63b2cdde8e48a109fb37f96cc9a263 89 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 5 86 1.8E-13 T 22-04-2016 IPR007337 RelB antitoxin/Antitoxin DinJ YE2230 d36b097ab0be6745e754b2e2602d43ce 333 PANTHER PTHR24220 17 325 2.8E-161 T 22-04-2016 YE2230 d36b097ab0be6745e754b2e2602d43ce 333 SMART SM00382 44 250 4.1E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain YE2230 d36b097ab0be6745e754b2e2602d43ce 333 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 244 326 3.2E-24 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 YE2230 d36b097ab0be6745e754b2e2602d43ce 333 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE2230 d36b097ab0be6745e754b2e2602d43ce 333 Pfam PF00005 ABC transporter 36 192 8.3E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE2230 d36b097ab0be6745e754b2e2602d43ce 333 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 244 308 7.7E-21 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 YE2230 d36b097ab0be6745e754b2e2602d43ce 333 SUPERFAMILY SSF52540 45 310 3.13E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2230 d36b097ab0be6745e754b2e2602d43ce 333 PANTHER PTHR24220:SF535 17 325 2.8E-161 T 22-04-2016 YE2230 d36b097ab0be6745e754b2e2602d43ce 333 Gene3D G3DSA:3.40.50.300 12 268 3.3E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2944 c8aab49c56cb5dd539b7ddab57c07162 935 PANTHER PTHR23152:SF4 1 935 0.0 T 22-04-2016 YE2944 c8aab49c56cb5dd539b7ddab57c07162 935 SMART SM00861 593 786 8.9E-62 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain YE2944 c8aab49c56cb5dd539b7ddab57c07162 935 Pfam PF02779 Transketolase, pyrimidine binding domain 592 787 2.3E-65 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain YE2944 c8aab49c56cb5dd539b7ddab57c07162 935 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 790 932 4.9E-53 T 22-04-2016 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 YE2944 c8aab49c56cb5dd539b7ddab57c07162 935 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 14 932 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 YE2944 c8aab49c56cb5dd539b7ddab57c07162 935 PANTHER PTHR23152 1 935 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 YE2944 c8aab49c56cb5dd539b7ddab57c07162 935 Gene3D G3DSA:3.40.50.970 162 549 1.3E-80 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE2944 c8aab49c56cb5dd539b7ddab57c07162 935 SUPERFAMILY SSF52518 577 793 4.88E-51 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE2944 c8aab49c56cb5dd539b7ddab57c07162 935 SUPERFAMILY SSF52518 120 540 1.26E-88 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE2944 c8aab49c56cb5dd539b7ddab57c07162 935 Pfam PF00676 Dehydrogenase E1 component 223 512 2.6E-50 T 22-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 YE2944 c8aab49c56cb5dd539b7ddab57c07162 935 Gene3D G3DSA:3.40.50.970 593 789 1.0E-23 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE2944 c8aab49c56cb5dd539b7ddab57c07162 935 PIRSF PIRSF000157 1 934 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 YE2944 c8aab49c56cb5dd539b7ddab57c07162 935 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 49 1.7E-15 T 22-04-2016 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 YE2378 0e163d8104930a7b8beba682b3532c23 608 PANTHER PTHR11472:SF37 1 595 1.1E-236 T 22-04-2016 YE2378 0e163d8104930a7b8beba682b3532c23 608 SMART SM00491 448 577 2.4E-54 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 YE2378 0e163d8104930a7b8beba682b3532c23 608 SUPERFAMILY SSF52540 362 376 3.28E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2378 0e163d8104930a7b8beba682b3532c23 608 SUPERFAMILY SSF52540 10 58 3.28E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2378 0e163d8104930a7b8beba682b3532c23 608 SUPERFAMILY SSF52540 147 222 3.28E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2378 0e163d8104930a7b8beba682b3532c23 608 SUPERFAMILY SSF52540 407 569 3.28E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2378 0e163d8104930a7b8beba682b3532c23 608 Pfam PF06733 DEAD_2 155 221 5.3E-5 T 22-04-2016 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 YE2378 0e163d8104930a7b8beba682b3532c23 608 Gene3D G3DSA:3.40.50.300 3 90 2.1E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2378 0e163d8104930a7b8beba682b3532c23 608 Gene3D G3DSA:3.40.50.300 164 208 2.1E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2378 0e163d8104930a7b8beba682b3532c23 608 Pfam PF13307 Helicase C-terminal domain 433 590 2.0E-34 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 YE2378 0e163d8104930a7b8beba682b3532c23 608 Pfam PF00270 DEAD/DEAH box helicase 7 55 4.0E-4 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YE2378 0e163d8104930a7b8beba682b3532c23 608 Gene3D G3DSA:3.40.50.300 424 573 3.8E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2378 0e163d8104930a7b8beba682b3532c23 608 PANTHER PTHR11472 1 595 1.1E-236 T 22-04-2016 YE1718 dbe084c928287e94e66db9a409a4fadc 223 Pfam PF00072 Response regulator receiver domain 3 113 2.2E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE1718 dbe084c928287e94e66db9a409a4fadc 223 Gene3D G3DSA:3.40.50.2300 1 119 4.9E-37 T 22-04-2016 YE1718 dbe084c928287e94e66db9a409a4fadc 223 SUPERFAMILY SSF52172 1 175 3.42E-39 T 22-04-2016 IPR011006 CheY-like superfamily YE1718 dbe084c928287e94e66db9a409a4fadc 223 SMART SM00448 1 112 3.6E-40 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE1718 dbe084c928287e94e66db9a409a4fadc 223 SMART SM00862 145 220 7.6E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YE1718 dbe084c928287e94e66db9a409a4fadc 223 PANTHER PTHR26402:SF537 1 223 4.6E-160 T 22-04-2016 YE1718 dbe084c928287e94e66db9a409a4fadc 223 Gene3D G3DSA:1.10.10.10 124 222 8.4E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1718 dbe084c928287e94e66db9a409a4fadc 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 220 2.6E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YE1718 dbe084c928287e94e66db9a409a4fadc 223 PANTHER PTHR26402 1 223 4.6E-160 T 22-04-2016 YE2023 2b7b030084cdbbc2dd0414778619fb15 405 PANTHER PTHR18964 63 402 5.2E-245 T 22-04-2016 YE2023 2b7b030084cdbbc2dd0414778619fb15 405 Gene3D G3DSA:3.30.420.40 223 374 3.9E-41 T 22-04-2016 YE2023 2b7b030084cdbbc2dd0414778619fb15 405 Gene3D G3DSA:1.10.10.10 12 81 4.3E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2023 2b7b030084cdbbc2dd0414778619fb15 405 SUPERFAMILY SSF53067 88 394 1.13E-43 T 22-04-2016 YE2023 2b7b030084cdbbc2dd0414778619fb15 405 Gene3D G3DSA:3.30.420.40 83 222 1.6E-31 T 22-04-2016 YE2023 2b7b030084cdbbc2dd0414778619fb15 405 Pfam PF00480 ROK family 96 388 4.4E-49 T 22-04-2016 IPR000600 ROK family YE2023 2b7b030084cdbbc2dd0414778619fb15 405 PANTHER PTHR18964:SF127 63 402 5.2E-245 T 22-04-2016 YE2023 2b7b030084cdbbc2dd0414778619fb15 405 SUPERFAMILY SSF46785 12 77 3.49E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2665 434b3c2b653c9989be79738ad4d008d4 244 SUPERFAMILY SSF49584 167 241 2.22E-13 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YE2665 434b3c2b653c9989be79738ad4d008d4 244 PANTHER PTHR30251 1 244 4.7E-115 T 22-04-2016 YE2665 434b3c2b653c9989be79738ad4d008d4 244 PRINTS PR00969 Pili chaperone signature 76 97 1.6E-28 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YE2665 434b3c2b653c9989be79738ad4d008d4 244 PRINTS PR00969 Pili chaperone signature 169 184 1.6E-28 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YE2665 434b3c2b653c9989be79738ad4d008d4 244 PRINTS PR00969 Pili chaperone signature 104 121 1.6E-28 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YE2665 434b3c2b653c9989be79738ad4d008d4 244 PRINTS PR00969 Pili chaperone signature 131 146 1.6E-28 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YE2665 434b3c2b653c9989be79738ad4d008d4 244 PRINTS PR00969 Pili chaperone signature 27 36 1.6E-28 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YE2665 434b3c2b653c9989be79738ad4d008d4 244 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 174 236 8.5E-14 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YE2665 434b3c2b653c9989be79738ad4d008d4 244 SUPERFAMILY SSF49354 22 149 1.1E-38 T 22-04-2016 IPR008962 PapD-like YE2665 434b3c2b653c9989be79738ad4d008d4 244 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 27 150 4.7E-40 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 YE2665 434b3c2b653c9989be79738ad4d008d4 244 Gene3D G3DSA:2.60.40.1070 164 238 2.7E-15 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YE2665 434b3c2b653c9989be79738ad4d008d4 244 Gene3D G3DSA:2.60.40.360 26 150 2.3E-40 T 22-04-2016 IPR008962 PapD-like YE2665 434b3c2b653c9989be79738ad4d008d4 244 PANTHER PTHR30251:SF8 1 244 4.7E-115 T 22-04-2016 YE2310 0b16e5bd719ec1dd88491ece18a9a539 234 PANTHER PTHR34858 1 234 1.3E-60 T 22-04-2016 YE2310 0b16e5bd719ec1dd88491ece18a9a539 234 SUPERFAMILY SSF102712 2 103 8.37E-24 T 22-04-2016 YE2310 0b16e5bd719ec1dd88491ece18a9a539 234 Pfam PF14464 Prokaryotic homologs of the JAB domain 5 99 2.3E-16 T 22-04-2016 IPR028090 JAB domain, prokaryotic YE2310 0b16e5bd719ec1dd88491ece18a9a539 234 PANTHER PTHR34858:SF1 1 234 1.3E-60 T 22-04-2016 YE2310 0b16e5bd719ec1dd88491ece18a9a539 234 SUPERFAMILY SSF54001 112 232 5.49E-15 T 22-04-2016 YE2310 0b16e5bd719ec1dd88491ece18a9a539 234 Pfam PF00877 NlpC/P60 family 116 230 3.8E-20 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- YE2310 0b16e5bd719ec1dd88491ece18a9a539 234 Gene3D G3DSA:3.90.1720.10 122 232 2.8E-15 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- YE2310 0b16e5bd719ec1dd88491ece18a9a539 234 Gene3D G3DSA:3.40.140.10 2 121 6.1E-28 T 22-04-2016 YE2310 0b16e5bd719ec1dd88491ece18a9a539 234 SMART SM00232 1 124 8.3E-22 T 22-04-2016 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain GO:0005515 YE2385 7eb4e2f0086a8439dc9a7a746c995ac0 480 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 479 3.8E-172 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YE2385 7eb4e2f0086a8439dc9a7a746c995ac0 480 SUPERFAMILY SSF50800 74 168 4.71E-25 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain YE2385 7eb4e2f0086a8439dc9a7a746c995ac0 480 Pfam PF00224 Pyruvate kinase, barrel domain 6 344 8.5E-132 T 22-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YE2385 7eb4e2f0086a8439dc9a7a746c995ac0 480 PANTHER PTHR11817 1 479 0.0 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YE2385 7eb4e2f0086a8439dc9a7a746c995ac0 480 PRINTS PR01050 Pyruvate kinase family signature 319 335 6.3E-52 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YE2385 7eb4e2f0086a8439dc9a7a746c995ac0 480 PRINTS PR01050 Pyruvate kinase family signature 190 204 6.3E-52 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YE2385 7eb4e2f0086a8439dc9a7a746c995ac0 480 PRINTS PR01050 Pyruvate kinase family signature 63 79 6.3E-52 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YE2385 7eb4e2f0086a8439dc9a7a746c995ac0 480 PRINTS PR01050 Pyruvate kinase family signature 300 318 6.3E-52 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YE2385 7eb4e2f0086a8439dc9a7a746c995ac0 480 PRINTS PR01050 Pyruvate kinase family signature 250 274 6.3E-52 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YE2385 7eb4e2f0086a8439dc9a7a746c995ac0 480 PRINTS PR01050 Pyruvate kinase family signature 275 299 6.3E-52 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YE2385 7eb4e2f0086a8439dc9a7a746c995ac0 480 PRINTS PR01050 Pyruvate kinase family signature 223 249 6.3E-52 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YE2385 7eb4e2f0086a8439dc9a7a746c995ac0 480 Gene3D G3DSA:2.40.33.10 77 170 9.5E-28 T 22-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YE2385 7eb4e2f0086a8439dc9a7a746c995ac0 480 SUPERFAMILY SSF52935 329 479 7.2E-39 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YE2385 7eb4e2f0086a8439dc9a7a746c995ac0 480 Gene3D G3DSA:3.40.1380.20 332 479 7.6E-39 T 22-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YE2385 7eb4e2f0086a8439dc9a7a746c995ac0 480 PANTHER PTHR11817:SF17 1 479 0.0 T 22-04-2016 YE2385 7eb4e2f0086a8439dc9a7a746c995ac0 480 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 22-04-2016 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YE2385 7eb4e2f0086a8439dc9a7a746c995ac0 480 SUPERFAMILY SSF51621 3 78 9.07E-88 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YE2385 7eb4e2f0086a8439dc9a7a746c995ac0 480 SUPERFAMILY SSF51621 160 345 9.07E-88 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YE2385 7eb4e2f0086a8439dc9a7a746c995ac0 480 Gene3D G3DSA:3.20.20.60 172 331 1.2E-94 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YE2385 7eb4e2f0086a8439dc9a7a746c995ac0 480 Gene3D G3DSA:3.20.20.60 6 76 1.2E-94 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YE2385 7eb4e2f0086a8439dc9a7a746c995ac0 480 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 477 1.5E-29 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 YE2571 672426aade79c2226f8912852c677fde 349 PANTHER PTHR24421:SF21 3 349 1.9E-190 T 22-04-2016 YE2571 672426aade79c2226f8912852c677fde 349 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 4 342 41.415 T 22-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 YE2571 672426aade79c2226f8912852c677fde 349 Pfam PF01339 CheB methylesterase 159 336 2.8E-63 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 YE2571 672426aade79c2226f8912852c677fde 349 SMART SM00448 4 119 2.1E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE2571 672426aade79c2226f8912852c677fde 349 SUPERFAMILY SSF52738 156 343 1.7E-76 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 YE2571 672426aade79c2226f8912852c677fde 349 PANTHER PTHR24421 3 349 1.9E-190 T 22-04-2016 YE2571 672426aade79c2226f8912852c677fde 349 SUPERFAMILY SSF52172 1 108 1.99E-27 T 22-04-2016 IPR011006 CheY-like superfamily YE2571 672426aade79c2226f8912852c677fde 349 PIRSF PIRSF000876 1 346 1.8E-138 T 22-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 YE2571 672426aade79c2226f8912852c677fde 349 Gene3D G3DSA:3.40.50.180 155 342 2.1E-86 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 YE2571 672426aade79c2226f8912852c677fde 349 Pfam PF00072 Response regulator receiver domain 6 109 3.7E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE2571 672426aade79c2226f8912852c677fde 349 Gene3D G3DSA:3.40.50.2300 2 108 2.0E-27 T 22-04-2016 YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 Pfam PF01476 LysM domain 61 105 1.6E-5 T 22-04-2016 IPR018392 LysM domain YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 PANTHER PTHR39576 62 1531 2.5E-114 T 22-04-2016 YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 SUPERFAMILY SSF49373 1448 1545 6.28E-14 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 PANTHER PTHR39576:SF2 62 1531 2.5E-114 T 22-04-2016 YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 SUPERFAMILY SSF49373 1034 1136 3.92E-16 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 SUPERFAMILY SSF49373 823 921 3.34E-15 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 SUPERFAMILY SSF49373 1249 1347 7.85E-15 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 SUPERFAMILY SSF49373 729 817 3.14E-16 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 Gene3D G3DSA:2.60.40.920 631 716 8.3E-14 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 Gene3D G3DSA:2.60.40.920 1048 1135 1.2E-15 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 Gene3D G3DSA:2.60.40.920 832 922 1.7E-15 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 Gene3D G3DSA:2.60.40.1080 1979 2022 1.2E-5 T 22-04-2016 YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 Gene3D G3DSA:2.60.40.1080 2069 2114 1.1E-7 T 22-04-2016 YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 SUPERFAMILY SSF49373 945 1037 1.65E-14 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 SUPERFAMILY SSF49373 628 717 1.86E-14 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 Pfam PF02369 Bacterial Ig-like domain (group 1) 1752 1837 1.8E-7 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 Pfam PF02369 Bacterial Ig-like domain (group 1) 943 1032 8.1E-11 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 Pfam PF02369 Bacterial Ig-like domain (group 1) 1042 1129 6.4E-11 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 Pfam PF02369 Bacterial Ig-like domain (group 1) 838 917 7.0E-11 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 Pfam PF02369 Bacterial Ig-like domain (group 1) 634 710 7.8E-8 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 SUPERFAMILY SSF49373 1346 1439 2.51E-14 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 SUPERFAMILY SSF49373 1853 1948 3.4E-16 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 SUPERFAMILY SSF49373 1750 1840 2.33E-16 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 SUPERFAMILY SSF49373 1647 1748 2.88E-14 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 Gene3D G3DSA:2.60.40.920 1551 1647 2.6E-12 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 Gene3D G3DSA:2.60.40.920 1351 1445 3.4E-15 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 Gene3D G3DSA:2.60.40.920 729 826 4.0E-17 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 Gene3D G3DSA:2.60.40.920 936 1038 7.7E-17 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 Gene3D G3DSA:3.10.350.10 60 109 2.9E-4 T 22-04-2016 IPR018392 LysM domain YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 Pfam PF11924 Invasin beta-domain of outer membrane 128 402 8.0E-102 T 22-04-2016 IPR024519 Invasin beta-domain of outer membrane YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 SUPERFAMILY SSF49373 1971 2024 6.67E-5 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 SUPERFAMILY SSF49373 510 611 4.19E-8 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 SMART SM00634 1249 1341 2.4E-5 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 SMART SM00634 1449 1544 0.025 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 SMART SM00634 1553 1643 2.2E-7 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 SMART SM00634 831 923 4.3E-12 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 SMART SM00634 1653 1745 3.6E-5 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 SMART SM00634 631 719 3.6E-4 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 SMART SM00634 1042 1133 1.7E-8 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 SMART SM00634 939 1031 3.1E-7 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 SMART SM00634 1756 1845 3.7E-10 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 SMART SM00634 1352 1440 2.8E-10 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 SMART SM00634 1144 1233 0.063 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 SMART SM00634 732 821 1.5E-4 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 SMART SM00634 1855 1947 0.0098 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 Pfam PF09134 Invasin, domain 3 1247 1347 2.1E-26 T 22-04-2016 IPR015217 Invasin, domain 3 YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 Pfam PF09134 Invasin, domain 3 1651 1745 6.9E-10 T 22-04-2016 IPR015217 Invasin, domain 3 YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 Pfam PF09134 Invasin, domain 3 1450 1543 6.1E-12 T 22-04-2016 IPR015217 Invasin, domain 3 YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 Pfam PF09134 Invasin, domain 3 1853 1948 3.1E-12 T 22-04-2016 IPR015217 Invasin, domain 3 YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 Pfam PF09134 Invasin, domain 3 514 612 9.0E-11 T 22-04-2016 IPR015217 Invasin, domain 3 YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 SUPERFAMILY SSF49373 1546 1645 9.81E-13 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 Gene3D G3DSA:2.60.40.920 1446 1545 3.5E-14 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 Gene3D G3DSA:2.60.40.920 1138 1233 5.7E-10 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 Gene3D G3DSA:2.60.40.920 1751 1842 1.4E-13 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 Gene3D G3DSA:2.60.40.920 1248 1344 2.1E-15 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 Gene3D G3DSA:2.60.40.920 1651 1747 1.4E-14 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 Gene3D G3DSA:2.60.40.920 1848 1949 5.4E-17 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 Gene3D G3DSA:2.60.40.920 514 612 7.7E-10 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 SUPERFAMILY SSF49373 2073 2118 3.92E-8 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 Pfam PF02368 Bacterial Ig-like domain (group 2) 1962 2021 1.4E-5 T 22-04-2016 IPR003343 Bacterial Ig-like, group 2 YE0694 8b3463b53f70e7b55a8543c6da6b0b46 2484 SUPERFAMILY SSF49373 1136 1233 7.06E-12 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YE3020 8568f03373909844b40fc4b5fc51b76e 491 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 422 8.2E-94 T 22-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 YE3020 8568f03373909844b40fc4b5fc51b76e 491 Gene3D G3DSA:3.40.1670.10 334 455 1.2E-13 T 22-04-2016 YE3020 8568f03373909844b40fc4b5fc51b76e 491 SUPERFAMILY SSF143968 316 483 8.24E-26 T 22-04-2016 YE3020 8568f03373909844b40fc4b5fc51b76e 491 SUPERFAMILY SSF50475 4 314 1.26E-76 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 YE3020 8568f03373909844b40fc4b5fc51b76e 491 PANTHER PTHR30108:SF1 7 491 6.4E-85 T 22-04-2016 YE3020 8568f03373909844b40fc4b5fc51b76e 491 Hamap MF_01983 UbiD-like decarboxylase. 2 489 39.138 T 22-04-2016 IPR032903 UbiD-like decarboxylase/ferulic acid decarboxylase 1 YE3020 8568f03373909844b40fc4b5fc51b76e 491 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 7 455 2.2E-75 T 22-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 YE3020 8568f03373909844b40fc4b5fc51b76e 491 PANTHER PTHR30108 7 491 6.4E-85 T 22-04-2016 YE0435 17d31cd6555adecd03992472ab84f988 136 ProSitePatterns PS01319 Ribosome-binding factor A signature. 82 103 - T 22-04-2016 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 YE0435 17d31cd6555adecd03992472ab84f988 136 SUPERFAMILY SSF89919 2 110 2.62E-31 T 22-04-2016 IPR023799 Ribosome-binding factor A domain YE0435 17d31cd6555adecd03992472ab84f988 136 Gene3D G3DSA:3.30.300.20 4 123 9.8E-37 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta YE0435 17d31cd6555adecd03992472ab84f988 136 PANTHER PTHR33515 1 136 1.2E-51 T 22-04-2016 YE0435 17d31cd6555adecd03992472ab84f988 136 Pfam PF02033 Ribosome-binding factor A 7 115 5.9E-30 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 YE0435 17d31cd6555adecd03992472ab84f988 136 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 103 6.0E-50 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 YE0435 17d31cd6555adecd03992472ab84f988 136 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 3 123 22.215 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 YE0435 17d31cd6555adecd03992472ab84f988 136 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 121 7.8E-41 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 YE3724 6c1114e94ec9f4b334a029c323fe8f9e 297 PANTHER PTHR30537:SF1 1 294 6.9E-184 T 22-04-2016 YE3724 6c1114e94ec9f4b334a029c323fe8f9e 297 Gene3D G3DSA:3.40.190.10 93 166 1.9E-5 T 22-04-2016 YE3724 6c1114e94ec9f4b334a029c323fe8f9e 297 Gene3D G3DSA:1.10.10.10 5 84 1.2E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3724 6c1114e94ec9f4b334a029c323fe8f9e 297 SUPERFAMILY SSF53850 92 294 6.24E-43 T 22-04-2016 YE3724 6c1114e94ec9f4b334a029c323fe8f9e 297 Gene3D G3DSA:3.40.190.10 167 265 3.2E-24 T 22-04-2016 YE3724 6c1114e94ec9f4b334a029c323fe8f9e 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 2.3E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE3724 6c1114e94ec9f4b334a029c323fe8f9e 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 2.3E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE3724 6c1114e94ec9f4b334a029c323fe8f9e 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 2.3E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE3724 6c1114e94ec9f4b334a029c323fe8f9e 297 SUPERFAMILY SSF46785 4 85 9.21E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3724 6c1114e94ec9f4b334a029c323fe8f9e 297 Pfam PF03466 LysR substrate binding domain 90 294 2.6E-40 T 22-04-2016 IPR005119 LysR, substrate-binding YE3724 6c1114e94ec9f4b334a029c323fe8f9e 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 2.6E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE3724 6c1114e94ec9f4b334a029c323fe8f9e 297 PANTHER PTHR30537 1 294 6.9E-184 T 22-04-2016 YE1399 2001b2536427c7b9f40809cff17b1eaa 384 Gene3D G3DSA:1.20.1250.20 22 184 3.5E-17 T 22-04-2016 YE1399 2001b2536427c7b9f40809cff17b1eaa 384 SUPERFAMILY SSF103473 22 377 1.44E-34 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE1399 2001b2536427c7b9f40809cff17b1eaa 384 PANTHER PTHR23514 15 384 1.4E-149 T 22-04-2016 YE1399 2001b2536427c7b9f40809cff17b1eaa 384 Gene3D G3DSA:1.20.1250.20 210 377 4.5E-10 T 22-04-2016 YE1399 2001b2536427c7b9f40809cff17b1eaa 384 PANTHER PTHR23514:SF13 15 384 1.4E-149 T 22-04-2016 YE1399 2001b2536427c7b9f40809cff17b1eaa 384 Pfam PF07690 Major Facilitator Superfamily 22 324 1.1E-14 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YE1641 8d3810d43e21eb4b2dc0fc1d70b1540c 335 Gene3D G3DSA:3.40.50.300 7 164 7.1E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1641 8d3810d43e21eb4b2dc0fc1d70b1540c 335 PANTHER PTHR11669 12 324 3.1E-151 T 22-04-2016 YE1641 8d3810d43e21eb4b2dc0fc1d70b1540c 335 Gene3D G3DSA:1.20.272.10 208 328 1.9E-44 T 22-04-2016 YE1641 8d3810d43e21eb4b2dc0fc1d70b1540c 335 PANTHER PTHR11669:SF8 12 324 3.1E-151 T 22-04-2016 YE1641 8d3810d43e21eb4b2dc0fc1d70b1540c 335 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 207 322 7.9E-41 T 22-04-2016 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE1641 8d3810d43e21eb4b2dc0fc1d70b1540c 335 SUPERFAMILY SSF52540 1 206 3.25E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1641 8d3810d43e21eb4b2dc0fc1d70b1540c 335 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 12 201 1.5E-61 T 22-04-2016 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE1641 8d3810d43e21eb4b2dc0fc1d70b1540c 335 SUPERFAMILY SSF48019 208 329 3.4E-36 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 YE1641 8d3810d43e21eb4b2dc0fc1d70b1540c 335 Pfam PF13177 DNA polymerase III, delta subunit 10 164 2.5E-38 T 22-04-2016 YE1641 8d3810d43e21eb4b2dc0fc1d70b1540c 335 Gene3D G3DSA:1.10.8.10 173 206 5.3E-4 T 22-04-2016 YE0644 64efa9f1a2681f06a0323b1061b5cc79 553 Gene3D G3DSA:3.90.76.10 131 265 3.0E-22 T 22-04-2016 YE0644 64efa9f1a2681f06a0323b1061b5cc79 553 Gene3D G3DSA:3.40.190.10 266 308 3.4E-6 T 22-04-2016 YE0644 64efa9f1a2681f06a0323b1061b5cc79 553 Gene3D G3DSA:1.10.10.10 5 56 1.0E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0644 64efa9f1a2681f06a0323b1061b5cc79 553 Pfam PF12793 Sugar transport-related sRNA regulator N-term 5 118 1.5E-43 T 22-04-2016 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain YE0644 64efa9f1a2681f06a0323b1061b5cc79 553 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 164 309 7.1E-20 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain YE0644 64efa9f1a2681f06a0323b1061b5cc79 553 PANTHER PTHR30290:SF30 119 552 2.4E-203 T 22-04-2016 YE0644 64efa9f1a2681f06a0323b1061b5cc79 553 PANTHER PTHR30290:SF30 22 81 2.4E-203 T 22-04-2016 YE0644 64efa9f1a2681f06a0323b1061b5cc79 553 PANTHER PTHR30290 119 552 2.4E-203 T 22-04-2016 YE0644 64efa9f1a2681f06a0323b1061b5cc79 553 PANTHER PTHR30290 22 81 2.4E-203 T 22-04-2016 YE0644 64efa9f1a2681f06a0323b1061b5cc79 553 SUPERFAMILY SSF46785 4 56 2.01E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0644 64efa9f1a2681f06a0323b1061b5cc79 553 SUPERFAMILY SSF53850 117 550 4.89E-68 T 22-04-2016 YE0644 64efa9f1a2681f06a0323b1061b5cc79 553 Hamap MF_01449 HTH-type transcriptional regulator SgrR [sgrR]. 1 552 67.642 T 22-04-2016 IPR023767 Transcriptional regulator SgrR YE2517 a65b728e2e49d14c89f9fd6e771d9cc3 330 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 17 318 2.1E-56 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YE2517 a65b728e2e49d14c89f9fd6e771d9cc3 330 PANTHER PTHR10314 1 319 4.5E-163 T 22-04-2016 YE2517 a65b728e2e49d14c89f9fd6e771d9cc3 330 PANTHER PTHR10314:SF105 1 319 4.5E-163 T 22-04-2016 YE2517 a65b728e2e49d14c89f9fd6e771d9cc3 330 Hamap MF_01045 D-cysteine desulfhydrase [dcyD]. 2 330 64.591 T 22-04-2016 IPR023702 D-cysteine desulphhydrase, bacterial GO:0019148 KEGG: 00270+4.4.1.15 YE2517 a65b728e2e49d14c89f9fd6e771d9cc3 330 TIGRFAM TIGR01275 ACC_deam_rel: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family 13 330 1.9E-127 T 22-04-2016 IPR005966 D-cysteine desulfhydrase GO:0003824 KEGG: 00270+4.4.1.15 YE2517 a65b728e2e49d14c89f9fd6e771d9cc3 330 SUPERFAMILY SSF53686 8 328 1.44E-86 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YE2517 a65b728e2e49d14c89f9fd6e771d9cc3 330 PIRSF PIRSF006278 1 330 1.1E-95 T 22-04-2016 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase YE2517 a65b728e2e49d14c89f9fd6e771d9cc3 330 Gene3D G3DSA:3.40.50.1100 113 327 1.5E-68 T 22-04-2016 YE2628 a5dd854785cf6aaf183ba54f3017cf61 458 PANTHER PTHR16222 16 400 2.5E-18 T 22-04-2016 YE2628 a5dd854785cf6aaf183ba54f3017cf61 458 SUPERFAMILY SSF101478 4 256 4.97E-44 T 22-04-2016 IPR005502 ADP-ribosylation/Crystallin J1 YE2628 a5dd854785cf6aaf183ba54f3017cf61 458 SUPERFAMILY SSF101478 288 366 4.97E-44 T 22-04-2016 IPR005502 ADP-ribosylation/Crystallin J1 YE2628 a5dd854785cf6aaf183ba54f3017cf61 458 Pfam PF03747 ADP-ribosylglycohydrolase 16 342 9.3E-27 T 22-04-2016 IPR005502 ADP-ribosylation/Crystallin J1 YE3045 0b851732a268b4292dbff0232d7294e5 293 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 37.937 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 YE3045 0b851732a268b4292dbff0232d7294e5 293 PANTHER PTHR10025 1 290 1.8E-178 T 22-04-2016 YE3045 0b851732a268b4292dbff0232d7294e5 293 SUPERFAMILY SSF51735 123 286 2.33E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3045 0b851732a268b4292dbff0232d7294e5 293 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 22-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 YE3045 0b851732a268b4292dbff0232d7294e5 293 Gene3D G3DSA:3.40.192.10 7 139 1.5E-51 T 22-04-2016 YE3045 0b851732a268b4292dbff0232d7294e5 293 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 22-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 YE3045 0b851732a268b4292dbff0232d7294e5 293 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 2.1E-87 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 YE3045 0b851732a268b4292dbff0232d7294e5 293 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 2.1E-87 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 YE3045 0b851732a268b4292dbff0232d7294e5 293 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 2.1E-87 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 YE3045 0b851732a268b4292dbff0232d7294e5 293 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 2.1E-87 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 YE3045 0b851732a268b4292dbff0232d7294e5 293 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 2.1E-87 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 YE3045 0b851732a268b4292dbff0232d7294e5 293 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 2.1E-87 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 YE3045 0b851732a268b4292dbff0232d7294e5 293 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 2.1E-87 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 YE3045 0b851732a268b4292dbff0232d7294e5 293 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 5.7E-68 T 22-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 YE3045 0b851732a268b4292dbff0232d7294e5 293 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 1.1E-39 T 22-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 YE3045 0b851732a268b4292dbff0232d7294e5 293 Gene3D G3DSA:3.40.50.720 140 264 1.8E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3045 0b851732a268b4292dbff0232d7294e5 293 SUPERFAMILY SSF53223 1 122 1.44E-40 T 22-04-2016 YE0658 7c09c974a9282be594fbf779c6da61af 575 Gene3D G3DSA:3.40.50.970 357 559 1.3E-77 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE0658 7c09c974a9282be594fbf779c6da61af 575 Gene3D G3DSA:3.40.50.1220 189 356 4.4E-67 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain YE0658 7c09c974a9282be594fbf779c6da61af 575 PANTHER PTHR18968:SF116 2 575 0.0 T 22-04-2016 YE0658 7c09c974a9282be594fbf779c6da61af 575 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 394 546 6.0E-50 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 YE0658 7c09c974a9282be594fbf779c6da61af 575 SUPERFAMILY SSF52467 188 362 1.08E-63 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain YE0658 7c09c974a9282be594fbf779c6da61af 575 PANTHER PTHR18968 2 575 0.0 T 22-04-2016 YE0658 7c09c974a9282be594fbf779c6da61af 575 Gene3D G3DSA:3.40.50.970 2 178 1.9E-76 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE0658 7c09c974a9282be594fbf779c6da61af 575 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 431 450 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 YE0658 7c09c974a9282be594fbf779c6da61af 575 SUPERFAMILY SSF52518 371 568 6.08E-69 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE0658 7c09c974a9282be594fbf779c6da61af 575 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 171 8.1E-60 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 YE0658 7c09c974a9282be594fbf779c6da61af 575 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 330 5.5E-47 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 YE0658 7c09c974a9282be594fbf779c6da61af 575 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 570 3.5E-278 T 22-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YE0658 7c09c974a9282be594fbf779c6da61af 575 SUPERFAMILY SSF52518 2 180 1.07E-66 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE1686 81bb073d332cafb3cfe1d76c85c4d921 762 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 147 517 5.4E-129 T 22-04-2016 IPR008766 Replication gene A protein GO:0006260 YE2537 8f5fc5c6b2a95cda976b75ba236ee61b 566 PANTHER PTHR30046 3 329 7.1E-221 T 22-04-2016 YE2537 8f5fc5c6b2a95cda976b75ba236ee61b 566 PANTHER PTHR30046 354 566 7.1E-221 T 22-04-2016 YE2537 8f5fc5c6b2a95cda976b75ba236ee61b 566 Pfam PF08345 Flagellar M-ring protein C-terminal 255 443 1.5E-49 T 22-04-2016 IPR013556 Flagellar M-ring C-terminal YE2537 8f5fc5c6b2a95cda976b75ba236ee61b 566 PIRSF PIRSF004862 7 566 5.1E-164 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 YE2537 8f5fc5c6b2a95cda976b75ba236ee61b 566 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 16 565 1.3E-168 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 YE2537 8f5fc5c6b2a95cda976b75ba236ee61b 566 Pfam PF01514 Secretory protein of YscJ/FliF family 34 223 4.2E-74 T 22-04-2016 IPR006182 Secretory protein YscJ/FliF YE2537 8f5fc5c6b2a95cda976b75ba236ee61b 566 PRINTS PR01009 Flagellar M-ring protein signature 371 395 7.6E-43 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 YE2537 8f5fc5c6b2a95cda976b75ba236ee61b 566 PRINTS PR01009 Flagellar M-ring protein signature 124 142 7.6E-43 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 YE2537 8f5fc5c6b2a95cda976b75ba236ee61b 566 PRINTS PR01009 Flagellar M-ring protein signature 199 217 7.6E-43 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 YE2537 8f5fc5c6b2a95cda976b75ba236ee61b 566 PRINTS PR01009 Flagellar M-ring protein signature 156 170 7.6E-43 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 YE2537 8f5fc5c6b2a95cda976b75ba236ee61b 566 PRINTS PR01009 Flagellar M-ring protein signature 268 286 7.6E-43 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 YE2537 8f5fc5c6b2a95cda976b75ba236ee61b 566 PANTHER PTHR30046:SF0 3 329 7.1E-221 T 22-04-2016 YE2537 8f5fc5c6b2a95cda976b75ba236ee61b 566 PANTHER PTHR30046:SF0 354 566 7.1E-221 T 22-04-2016 YE0131 ad602d97eebc99a61ce5776c39acafbd 482 SUPERFAMILY SSF55424 348 466 7.04E-25 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 YE0131 ad602d97eebc99a61ce5776c39acafbd 482 Gene3D G3DSA:3.50.50.60 5 146 3.1E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE0131 ad602d97eebc99a61ce5776c39acafbd 482 Gene3D G3DSA:3.50.50.60 269 336 3.1E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE0131 ad602d97eebc99a61ce5776c39acafbd 482 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 326 1.9E-37 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE0131 ad602d97eebc99a61ce5776c39acafbd 482 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 174 192 2.1E-19 T 22-04-2016 YE0131 ad602d97eebc99a61ce5776c39acafbd 482 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 277 2.1E-19 T 22-04-2016 YE0131 ad602d97eebc99a61ce5776c39acafbd 482 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 2.1E-19 T 22-04-2016 YE0131 ad602d97eebc99a61ce5776c39acafbd 482 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 2.1E-19 T 22-04-2016 YE0131 ad602d97eebc99a61ce5776c39acafbd 482 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 135 153 2.1E-19 T 22-04-2016 YE0131 ad602d97eebc99a61ce5776c39acafbd 482 PIRSF PIRSF000350 2 467 1.3E-56 T 22-04-2016 YE0131 ad602d97eebc99a61ce5776c39acafbd 482 Gene3D G3DSA:3.50.50.60 154 268 3.0E-21 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE0131 ad602d97eebc99a61ce5776c39acafbd 482 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 349 458 1.2E-17 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 YE0131 ad602d97eebc99a61ce5776c39acafbd 482 SUPERFAMILY SSF51905 1 56 3.34E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE0131 ad602d97eebc99a61ce5776c39acafbd 482 SUPERFAMILY SSF51905 114 365 3.34E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE0131 ad602d97eebc99a61ce5776c39acafbd 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 433 453 9.9E-40 T 22-04-2016 YE0131 ad602d97eebc99a61ce5776c39acafbd 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 9.9E-40 T 22-04-2016 YE0131 ad602d97eebc99a61ce5776c39acafbd 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 9.9E-40 T 22-04-2016 YE0131 ad602d97eebc99a61ce5776c39acafbd 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 262 276 9.9E-40 T 22-04-2016 YE0131 ad602d97eebc99a61ce5776c39acafbd 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 9.9E-40 T 22-04-2016 YE0131 ad602d97eebc99a61ce5776c39acafbd 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 411 426 9.9E-40 T 22-04-2016 YE0131 ad602d97eebc99a61ce5776c39acafbd 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 174 199 9.9E-40 T 22-04-2016 YE0131 ad602d97eebc99a61ce5776c39acafbd 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 9.9E-40 T 22-04-2016 YE0131 ad602d97eebc99a61ce5776c39acafbd 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 138 147 9.9E-40 T 22-04-2016 YE0131 ad602d97eebc99a61ce5776c39acafbd 482 PANTHER PTHR22912:SF176 1 462 0.0 T 22-04-2016 YE0131 ad602d97eebc99a61ce5776c39acafbd 482 Gene3D G3DSA:3.30.390.30 349 462 2.2E-25 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 YE0131 ad602d97eebc99a61ce5776c39acafbd 482 PANTHER PTHR22912 1 462 0.0 T 22-04-2016 YE1398 88cfa389644fbe7605e87b682c3e594e 897 Gene3D G3DSA:1.20.120.160 773 891 2.3E-30 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YE1398 88cfa389644fbe7605e87b682c3e594e 897 PANTHER PTHR26402 89 105 8.7E-65 T 22-04-2016 YE1398 88cfa389644fbe7605e87b682c3e594e 897 PANTHER PTHR26402 140 267 8.7E-65 T 22-04-2016 YE1398 88cfa389644fbe7605e87b682c3e594e 897 Hamap MF_00980 Phosphotransferase RcsD [rcsD]. 9 892 26.354 T 22-04-2016 IPR030861 Phosphotransferase RcsD GO:0000160|GO:0005887|GO:0009927 YE1398 88cfa389644fbe7605e87b682c3e594e 897 Pfam PF16359 RcsD-ABL domain 684 786 8.4E-40 T 22-04-2016 IPR032306 Phosphotransferase RcsD, RcsD-ABL domain YE1398 88cfa389644fbe7605e87b682c3e594e 897 SMART SM00387 562 675 1.3E-9 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE1398 88cfa389644fbe7605e87b682c3e594e 897 Gene3D G3DSA:3.30.565.10 540 721 1.7E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE1398 88cfa389644fbe7605e87b682c3e594e 897 Pfam PF01627 Hpt domain 812 891 2.2E-9 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YE1398 88cfa389644fbe7605e87b682c3e594e 897 SUPERFAMILY SSF47384 435 515 3.73E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE1398 88cfa389644fbe7605e87b682c3e594e 897 PANTHER PTHR26402:SF603 89 105 8.7E-65 T 22-04-2016 YE1398 88cfa389644fbe7605e87b682c3e594e 897 PANTHER PTHR26402:SF603 140 267 8.7E-65 T 22-04-2016 YE1398 88cfa389644fbe7605e87b682c3e594e 897 SMART SM00388 450 515 2.7E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE1398 88cfa389644fbe7605e87b682c3e594e 897 SUPERFAMILY SSF47226 787 891 8.37E-19 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YE1398 88cfa389644fbe7605e87b682c3e594e 897 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 562 671 3.3E-12 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE1398 88cfa389644fbe7605e87b682c3e594e 897 SUPERFAMILY SSF55874 504 673 1.24E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE2103 0bc4b3cd0a5e27879db5fdb6c76f00c8 451 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 346 354 - T 22-04-2016 IPR018120 Glycoside hydrolase family 1, active site YE2103 0bc4b3cd0a5e27879db5fdb6c76f00c8 451 PANTHER PTHR10353:SF35 41 451 3.6E-232 T 22-04-2016 YE2103 0bc4b3cd0a5e27879db5fdb6c76f00c8 451 PANTHER PTHR10353 41 451 3.6E-232 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YE2103 0bc4b3cd0a5e27879db5fdb6c76f00c8 451 PRINTS PR00131 Glycosyl hydrolase family 1 signature 388 405 1.4E-15 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YE2103 0bc4b3cd0a5e27879db5fdb6c76f00c8 451 PRINTS PR00131 Glycosyl hydrolase family 1 signature 346 354 1.4E-15 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YE2103 0bc4b3cd0a5e27879db5fdb6c76f00c8 451 PRINTS PR00131 Glycosyl hydrolase family 1 signature 367 378 1.4E-15 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YE2103 0bc4b3cd0a5e27879db5fdb6c76f00c8 451 PRINTS PR00131 Glycosyl hydrolase family 1 signature 413 425 1.4E-15 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YE2103 0bc4b3cd0a5e27879db5fdb6c76f00c8 451 PRINTS PR00131 Glycosyl hydrolase family 1 signature 280 294 1.4E-15 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YE2103 0bc4b3cd0a5e27879db5fdb6c76f00c8 451 Gene3D G3DSA:3.20.20.80 24 449 1.1E-126 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 YE2103 0bc4b3cd0a5e27879db5fdb6c76f00c8 451 SUPERFAMILY SSF51445 34 445 7.93E-142 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YE2103 0bc4b3cd0a5e27879db5fdb6c76f00c8 451 Pfam PF00232 Glycosyl hydrolase family 1 38 448 7.7E-122 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YE3094A 4928e4325d597d4be34373b239e80291 126 PANTHER PTHR35813 1 125 1.2E-41 T 22-04-2016 YE3094A 4928e4325d597d4be34373b239e80291 126 PANTHER PTHR35813:SF1 1 125 1.2E-41 T 22-04-2016 YE3094A 4928e4325d597d4be34373b239e80291 126 PIRSF PIRSF016789 2 123 1.9E-47 T 22-04-2016 IPR007401 Protein of unknown function DUF454 YE3094A 4928e4325d597d4be34373b239e80291 126 Pfam PF04304 Protein of unknown function (DUF454) 3 116 2.6E-39 T 22-04-2016 IPR007401 Protein of unknown function DUF454 YE2766 cf5c7a40df4d490b39c5e24e0919572e 441 Pfam PF00815 Histidinol dehydrogenase 31 430 5.2E-165 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 YE2766 cf5c7a40df4d490b39c5e24e0919572e 441 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 233 265 - T 22-04-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 YE2766 cf5c7a40df4d490b39c5e24e0919572e 441 PANTHER PTHR21256 9 436 3.2E-302 T 22-04-2016 YE2766 cf5c7a40df4d490b39c5e24e0919572e 441 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 10 430 40.827 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 YE2766 cf5c7a40df4d490b39c5e24e0919572e 441 PIRSF PIRSF000099 3 433 6.6E-168 T 22-04-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 YE2766 cf5c7a40df4d490b39c5e24e0919572e 441 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 39 429 1.7E-159 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 YE2766 cf5c7a40df4d490b39c5e24e0919572e 441 Gene3D G3DSA:3.40.50.1980 33 243 6.9E-78 T 22-04-2016 YE2766 cf5c7a40df4d490b39c5e24e0919572e 441 PANTHER PTHR21256:SF14 9 436 3.2E-302 T 22-04-2016 YE2766 cf5c7a40df4d490b39c5e24e0919572e 441 PRINTS PR00083 Histidinol dehydrogenase signature 112 139 8.6E-100 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 YE2766 cf5c7a40df4d490b39c5e24e0919572e 441 PRINTS PR00083 Histidinol dehydrogenase signature 364 382 8.6E-100 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 YE2766 cf5c7a40df4d490b39c5e24e0919572e 441 PRINTS PR00083 Histidinol dehydrogenase signature 201 226 8.6E-100 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 YE2766 cf5c7a40df4d490b39c5e24e0919572e 441 PRINTS PR00083 Histidinol dehydrogenase signature 233 254 8.6E-100 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 YE2766 cf5c7a40df4d490b39c5e24e0919572e 441 PRINTS PR00083 Histidinol dehydrogenase signature 39 63 8.6E-100 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 YE2766 cf5c7a40df4d490b39c5e24e0919572e 441 PRINTS PR00083 Histidinol dehydrogenase signature 323 348 8.6E-100 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 YE2766 cf5c7a40df4d490b39c5e24e0919572e 441 PRINTS PR00083 Histidinol dehydrogenase signature 255 274 8.6E-100 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 YE2766 cf5c7a40df4d490b39c5e24e0919572e 441 PRINTS PR00083 Histidinol dehydrogenase signature 171 197 8.6E-100 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 YE2766 cf5c7a40df4d490b39c5e24e0919572e 441 SUPERFAMILY SSF53720 10 430 3.73E-86 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 YE2168 9a299ddda93bad215820820812241a8e 383 PANTHER PTHR11601 1 382 9.3E-184 T 22-04-2016 YE2168 9a299ddda93bad215820820812241a8e 383 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 1 382 6.9E-172 T 22-04-2016 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 YE2168 9a299ddda93bad215820820812241a8e 383 PANTHER PTHR11601:SF17 1 382 9.3E-184 T 22-04-2016 YE2168 9a299ddda93bad215820820812241a8e 383 Pfam PF00266 Aminotransferase class-V 3 371 7.5E-157 T 22-04-2016 IPR000192 Aminotransferase class V domain YE2168 9a299ddda93bad215820820812241a8e 383 SUPERFAMILY SSF53383 2 378 2.15E-118 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YE2168 9a299ddda93bad215820820812241a8e 383 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 194 213 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site YE2168 9a299ddda93bad215820820812241a8e 383 Gene3D G3DSA:3.90.1150.10 262 375 3.6E-27 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YE2168 9a299ddda93bad215820820812241a8e 383 Gene3D G3DSA:3.40.640.10 14 261 6.4E-82 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YE3879 9578f225b0d09fbf9e586e1df4f01dfc 575 Hamap MF_00747 Isocitrate dehydrogenase kinase/phosphatase [aceK]. 1 570 43.803 T 22-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 YE3879 9578f225b0d09fbf9e586e1df4f01dfc 575 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 9 566 2.0E-252 T 22-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 YE3879 9578f225b0d09fbf9e586e1df4f01dfc 575 PIRSF PIRSF000719 1 575 4.6E-298 T 22-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 YE3879 9578f225b0d09fbf9e586e1df4f01dfc 575 PANTHER PTHR39559 1 575 1.7E-248 T 22-04-2016 YE3879 9578f225b0d09fbf9e586e1df4f01dfc 575 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 7 572 0.0 T 22-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 YE1739 f8bf6472ba53983ffbece612be73dba2 113 PANTHER PTHR33204 1 109 1.4E-62 T 22-04-2016 YE1739 f8bf6472ba53983ffbece612be73dba2 113 SUPERFAMILY SSF46785 3 105 6.12E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1739 f8bf6472ba53983ffbece612be73dba2 113 PANTHER PTHR33204:SF7 1 109 1.4E-62 T 22-04-2016 YE1739 f8bf6472ba53983ffbece612be73dba2 113 Gene3D G3DSA:1.10.10.10 3 110 3.0E-43 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1739 f8bf6472ba53983ffbece612be73dba2 113 Pfam PF01638 HxlR-like helix-turn-helix 15 102 1.3E-27 T 22-04-2016 IPR002577 Helix-turn-helix, HxlR type YE3990 835af3e53bf92dfe82ed44830f2ce517 903 Hamap MF_01247 HTH-type transcriptional regulator MalT [malT]. 1 902 36.896 T 22-04-2016 IPR023768 Transcriptional regulator HTH-type, MalT YE3990 835af3e53bf92dfe82ed44830f2ce517 903 ProSitePatterns PS00622 LuxR-type HTH domain signature. 853 880 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE3990 835af3e53bf92dfe82ed44830f2ce517 903 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 839 853 2.7E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE3990 835af3e53bf92dfe82ed44830f2ce517 903 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 853 869 2.7E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE3990 835af3e53bf92dfe82ed44830f2ce517 903 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 869 881 2.7E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE3990 835af3e53bf92dfe82ed44830f2ce517 903 SUPERFAMILY SSF48452 442 806 1.9E-157 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YE3990 835af3e53bf92dfe82ed44830f2ce517 903 SUPERFAMILY SSF46894 829 895 7.14E-17 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YE3990 835af3e53bf92dfe82ed44830f2ce517 903 Gene3D G3DSA:1.10.10.10 838 896 4.8E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3990 835af3e53bf92dfe82ed44830f2ce517 903 SMART SM00421 836 893 7.9E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE3990 835af3e53bf92dfe82ed44830f2ce517 903 Gene3D G3DSA:3.40.50.300 31 164 2.4E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3990 835af3e53bf92dfe82ed44830f2ce517 903 PANTHER PTHR26402 78 100 2.0E-19 T 22-04-2016 YE3990 835af3e53bf92dfe82ed44830f2ce517 903 PANTHER PTHR26402 813 900 2.0E-19 T 22-04-2016 YE3990 835af3e53bf92dfe82ed44830f2ce517 903 SUPERFAMILY SSF52540 8 226 1.92E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3990 835af3e53bf92dfe82ed44830f2ce517 903 Gene3D G3DSA:1.25.40.10 449 811 5.0E-98 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YE3990 835af3e53bf92dfe82ed44830f2ce517 903 PANTHER PTHR26402:SF567 78 100 2.0E-19 T 22-04-2016 YE3990 835af3e53bf92dfe82ed44830f2ce517 903 PANTHER PTHR26402:SF567 813 900 2.0E-19 T 22-04-2016 YE3990 835af3e53bf92dfe82ed44830f2ce517 903 Pfam PF00196 Bacterial regulatory proteins, luxR family 838 891 7.1E-19 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE2812 409e88485eaa18d917e40b4d2236bfcd 284 Pfam PF01226 Formate/nitrite transporter 15 276 1.6E-76 T 22-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 YE2812 409e88485eaa18d917e40b4d2236bfcd 284 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 168 178 - T 22-04-2016 IPR024002 Formate/nitrite transporter, conserved site YE2812 409e88485eaa18d917e40b4d2236bfcd 284 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 14 279 1.9E-124 T 22-04-2016 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 YE2812 409e88485eaa18d917e40b4d2236bfcd 284 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 26 280 4.7E-93 T 22-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 YE2812 409e88485eaa18d917e40b4d2236bfcd 284 PANTHER PTHR30520 1 228 4.6E-98 T 22-04-2016 YE2812 409e88485eaa18d917e40b4d2236bfcd 284 PANTHER PTHR30520 245 281 4.6E-98 T 22-04-2016 YE2812 409e88485eaa18d917e40b4d2236bfcd 284 Gene3D G3DSA:1.20.1080.10 30 280 5.1E-89 T 22-04-2016 IPR023271 Aquaporin-like YE2812 409e88485eaa18d917e40b4d2236bfcd 284 PANTHER PTHR30520:SF0 1 228 4.6E-98 T 22-04-2016 YE2812 409e88485eaa18d917e40b4d2236bfcd 284 PANTHER PTHR30520:SF0 245 281 4.6E-98 T 22-04-2016 YE2812 409e88485eaa18d917e40b4d2236bfcd 284 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 83 92 - T 22-04-2016 IPR024002 Formate/nitrite transporter, conserved site YE2592 64f8db49d756b3acf94adc5cbabd1425 1050 Pfam PF00703 Glycosyl hydrolases family 2 228 349 3.3E-11 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 YE2592 64f8db49d756b3acf94adc5cbabd1425 1050 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 351 644 1.9E-115 T 22-04-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YE2592 64f8db49d756b3acf94adc5cbabd1425 1050 Hamap MF_01687 Beta-galactosidase [lacZ]. 13 1047 17.616 T 22-04-2016 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase GO:0016798 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YE2592 64f8db49d756b3acf94adc5cbabd1425 1050 Gene3D G3DSA:2.60.40.320 641 747 2.9E-26 T 22-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 YE2592 64f8db49d756b3acf94adc5cbabd1425 1050 Pfam PF16353 Domain of unknown function(DUF4981) 655 743 2.0E-15 T 22-04-2016 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YE2592 64f8db49d756b3acf94adc5cbabd1425 1050 Gene3D G3DSA:2.70.98.10 757 1044 5.2E-91 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 YE2592 64f8db49d756b3acf94adc5cbabd1425 1050 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 463 477 - T 22-04-2016 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YE2592 64f8db49d756b3acf94adc5cbabd1425 1050 PANTHER PTHR10066:SF72 1 592 0.0 T 22-04-2016 YE2592 64f8db49d756b3acf94adc5cbabd1425 1050 PANTHER PTHR10066:SF72 610 1042 0.0 T 22-04-2016 YE2592 64f8db49d756b3acf94adc5cbabd1425 1050 PANTHER PTHR10066 1 592 0.0 T 22-04-2016 YE2592 64f8db49d756b3acf94adc5cbabd1425 1050 PANTHER PTHR10066 610 1042 0.0 T 22-04-2016 YE2592 64f8db49d756b3acf94adc5cbabd1425 1050 Gene3D G3DSA:3.20.20.80 351 637 2.2E-114 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 YE2592 64f8db49d756b3acf94adc5cbabd1425 1050 SUPERFAMILY SSF74650 758 1044 8.32E-95 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 YE2592 64f8db49d756b3acf94adc5cbabd1425 1050 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 401 426 - T 22-04-2016 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YE2592 64f8db49d756b3acf94adc5cbabd1425 1050 Gene3D G3DSA:2.60.40.320 216 349 1.6E-30 T 22-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 YE2592 64f8db49d756b3acf94adc5cbabd1425 1050 SUPERFAMILY SSF49303 637 746 1.08E-28 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 YE2592 64f8db49d756b3acf94adc5cbabd1425 1050 SUPERFAMILY SSF49303 228 349 4.03E-20 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 YE2592 64f8db49d756b3acf94adc5cbabd1425 1050 PRINTS PR00132 Glycosyl hydrolase family 2 signature 547 562 1.1E-37 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YE2592 64f8db49d756b3acf94adc5cbabd1425 1050 PRINTS PR00132 Glycosyl hydrolase family 2 signature 463 478 1.1E-37 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YE2592 64f8db49d756b3acf94adc5cbabd1425 1050 PRINTS PR00132 Glycosyl hydrolase family 2 signature 360 374 1.1E-37 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YE2592 64f8db49d756b3acf94adc5cbabd1425 1050 PRINTS PR00132 Glycosyl hydrolase family 2 signature 154 169 1.1E-37 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YE2592 64f8db49d756b3acf94adc5cbabd1425 1050 PRINTS PR00132 Glycosyl hydrolase family 2 signature 391 409 1.1E-37 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YE2592 64f8db49d756b3acf94adc5cbabd1425 1050 SUPERFAMILY SSF49785 22 226 2.41E-68 T 22-04-2016 IPR008979 Galactose-binding domain-like YE2592 64f8db49d756b3acf94adc5cbabd1425 1050 SUPERFAMILY SSF51445 351 638 2.27E-100 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YE2592 64f8db49d756b3acf94adc5cbabd1425 1050 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 62 226 1.6E-63 T 22-04-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YE2592 64f8db49d756b3acf94adc5cbabd1425 1050 Gene3D G3DSA:2.60.120.260 17 215 2.0E-84 T 22-04-2016 IPR008979 Galactose-binding domain-like YE2592 64f8db49d756b3acf94adc5cbabd1425 1050 Pfam PF02929 Beta galactosidase small chain 776 1042 1.0E-63 T 22-04-2016 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YE2592 64f8db49d756b3acf94adc5cbabd1425 1050 SMART SM01038 772 1045 1.0E-124 T 22-04-2016 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 YE1241 8d6542438a62d7751d06ec50405ff786 338 PANTHER PTHR30006:SF6 11 333 9.9E-115 T 22-04-2016 YE1241 8d6542438a62d7751d06ec50405ff786 338 SUPERFAMILY SSF53850 33 331 9.06E-74 T 22-04-2016 YE1241 8d6542438a62d7751d06ec50405ff786 338 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 126 143 - T 22-04-2016 IPR006061 Solute-binding family 1, conserved site GO:0005215|GO:0006810 YE1241 8d6542438a62d7751d06ec50405ff786 338 Gene3D G3DSA:3.40.190.10 132 270 1.9E-52 T 22-04-2016 YE1241 8d6542438a62d7751d06ec50405ff786 338 Pfam PF13343 Bacterial extracellular solute-binding protein 81 307 8.1E-26 T 22-04-2016 YE1241 8d6542438a62d7751d06ec50405ff786 338 PANTHER PTHR30006 11 333 9.9E-115 T 22-04-2016 YE1241 8d6542438a62d7751d06ec50405ff786 338 PIRSF PIRSF002825 4 338 9.8E-82 T 22-04-2016 IPR026045 Ferric binding protein YE1241 8d6542438a62d7751d06ec50405ff786 338 Gene3D G3DSA:3.40.190.10 11 127 1.1E-27 T 22-04-2016 YE1241 8d6542438a62d7751d06ec50405ff786 338 Gene3D G3DSA:3.40.190.10 271 323 1.1E-27 T 22-04-2016 YE1107 1d5a0e43827505977c18d162ae8919a5 1024 Gene3D G3DSA:1.10.3850.10 794 1010 2.7E-52 T 22-04-2016 YE1107 1d5a0e43827505977c18d162ae8919a5 1024 SUPERFAMILY SSF82693 555 650 1.06E-17 T 22-04-2016 YE1107 1d5a0e43827505977c18d162ae8919a5 1024 SUPERFAMILY SSF82714 703 785 1.27E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YE1107 1d5a0e43827505977c18d162ae8919a5 1024 SUPERFAMILY SSF82693 136 182 3.92E-22 T 22-04-2016 YE1107 1d5a0e43827505977c18d162ae8919a5 1024 SUPERFAMILY SSF82693 268 324 3.92E-22 T 22-04-2016 YE1107 1d5a0e43827505977c18d162ae8919a5 1024 SUPERFAMILY SSF82866 290 491 2.35E-46 T 22-04-2016 YE1107 1d5a0e43827505977c18d162ae8919a5 1024 Gene3D G3DSA:3.30.70.1430 40 141 1.1E-29 T 22-04-2016 YE1107 1d5a0e43827505977c18d162ae8919a5 1024 SUPERFAMILY SSF82714 183 265 4.84E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YE1107 1d5a0e43827505977c18d162ae8919a5 1024 PANTHER PTHR32063 1 1024 0.0 T 22-04-2016 YE1107 1d5a0e43827505977c18d162ae8919a5 1024 Gene3D G3DSA:3.30.70.1430 558 646 1.9E-13 T 22-04-2016 YE1107 1d5a0e43827505977c18d162ae8919a5 1024 SUPERFAMILY SSF82866 812 1010 3.79E-41 T 22-04-2016 YE1107 1d5a0e43827505977c18d162ae8919a5 1024 Gene3D G3DSA:1.20.1640.10 285 498 4.9E-56 T 22-04-2016 YE1107 1d5a0e43827505977c18d162ae8919a5 1024 SUPERFAMILY SSF82693 665 701 7.85E-6 T 22-04-2016 YE1107 1d5a0e43827505977c18d162ae8919a5 1024 SUPERFAMILY SSF82693 788 832 7.85E-6 T 22-04-2016 YE1107 1d5a0e43827505977c18d162ae8919a5 1024 PANTHER PTHR32063:SF34 1 1024 0.0 T 22-04-2016 YE1107 1d5a0e43827505977c18d162ae8919a5 1024 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE1107 1d5a0e43827505977c18d162ae8919a5 1024 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.3E-85 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE1107 1d5a0e43827505977c18d162ae8919a5 1024 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 1.3E-85 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE1107 1d5a0e43827505977c18d162ae8919a5 1024 PRINTS PR00702 Acriflavin resistance protein family signature 542 559 1.3E-85 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE1107 1d5a0e43827505977c18d162ae8919a5 1024 PRINTS PR00702 Acriflavin resistance protein family signature 605 619 1.3E-85 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE1107 1d5a0e43827505977c18d162ae8919a5 1024 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.3E-85 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE1107 1d5a0e43827505977c18d162ae8919a5 1024 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.3E-85 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE1107 1d5a0e43827505977c18d162ae8919a5 1024 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.3E-85 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE1107 1d5a0e43827505977c18d162ae8919a5 1024 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 1.3E-85 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE1107 1d5a0e43827505977c18d162ae8919a5 1024 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.3E-85 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE1107 1d5a0e43827505977c18d162ae8919a5 1024 Gene3D G3DSA:3.30.2090.10 703 784 2.1E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YE1107 1d5a0e43827505977c18d162ae8919a5 1024 Gene3D G3DSA:3.30.2090.10 183 263 3.8E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YE1107 1d5a0e43827505977c18d162ae8919a5 1024 Hamap MF_01424 Multidrug resistance protein MdtC [mdtC]. 1 1024 27.237 T 22-04-2016 IPR023931 Multidrug resistance protein MdtC YE1107 1d5a0e43827505977c18d162ae8919a5 1024 SUPERFAMILY SSF82693 40 135 4.19E-23 T 22-04-2016 YE2997 cdc839b5374f775687e23ea8eacea39f 207 PANTHER PTHR38098 1 207 1.4E-71 T 22-04-2016 YE2997 cdc839b5374f775687e23ea8eacea39f 207 PANTHER PTHR38098:SF1 1 207 1.4E-71 T 22-04-2016 YE2997 cdc839b5374f775687e23ea8eacea39f 207 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 5 164 27.469 T 22-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 YE2997 cdc839b5374f775687e23ea8eacea39f 207 Gene3D G3DSA:3.30.160.150 20 171 7.1E-62 T 22-04-2016 YE2997 cdc839b5374f775687e23ea8eacea39f 207 Pfam PF04390 Lipopolysaccharide-assembly 12 159 1.2E-21 T 22-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 YE2286 b023e23747a5f459fb73d92b1d2ead3e 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 260 8.5E-82 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 YE2286 b023e23747a5f459fb73d92b1d2ead3e 262 PANTHER PTHR23416 1 254 1.5E-92 T 22-04-2016 YE2286 b023e23747a5f459fb73d92b1d2ead3e 262 PIRSF PIRSF000456 5 262 9.7E-84 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 YE2286 b023e23747a5f459fb73d92b1d2ead3e 262 Gene3D G3DSA:2.160.10.10 93 201 2.4E-24 T 22-04-2016 YE2286 b023e23747a5f459fb73d92b1d2ead3e 262 SUPERFAMILY SSF51161 2 262 3.63E-67 T 22-04-2016 IPR011004 Trimeric LpxA-like YE2286 b023e23747a5f459fb73d92b1d2ead3e 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 17 52 4.6E-9 T 22-04-2016 IPR001451 Hexapeptide repeat YE2286 b023e23747a5f459fb73d92b1d2ead3e 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 5.8E-7 T 22-04-2016 IPR001451 Hexapeptide repeat YE2286 b023e23747a5f459fb73d92b1d2ead3e 262 PANTHER PTHR23416:SF8 1 254 1.5E-92 T 22-04-2016 YE2286 b023e23747a5f459fb73d92b1d2ead3e 262 Gene3D G3DSA:2.160.10.10 2 92 5.9E-21 T 22-04-2016 YE2286 b023e23747a5f459fb73d92b1d2ead3e 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 261 1.5E-10 T 22-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 YE2286 b023e23747a5f459fb73d92b1d2ead3e 262 Gene3D G3DSA:1.20.1180.10 207 262 9.5E-10 T 22-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 YE2286 b023e23747a5f459fb73d92b1d2ead3e 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 20 48 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 YE3396 5914ece40be1386d3ab34f236e8e700f 437 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 348 360 - T 22-04-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site YE3396 5914ece40be1386d3ab34f236e8e700f 437 PRINTS PR00599 Methionine aminopeptidase-1 signature 371 383 3.2E-5 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase YE3396 5914ece40be1386d3ab34f236e8e700f 437 PRINTS PR00599 Methionine aminopeptidase-1 signature 253 269 3.2E-5 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase YE3396 5914ece40be1386d3ab34f236e8e700f 437 Pfam PF05195 Aminopeptidase P, N-terminal domain 6 126 4.7E-36 T 22-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 YE3396 5914ece40be1386d3ab34f236e8e700f 437 SMART SM01011 1 136 2.3E-58 T 22-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 YE3396 5914ece40be1386d3ab34f236e8e700f 437 PANTHER PTHR10804 1 434 7.6E-165 T 22-04-2016 YE3396 5914ece40be1386d3ab34f236e8e700f 437 SUPERFAMILY SSF53092 1 174 1.91E-53 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal YE3396 5914ece40be1386d3ab34f236e8e700f 437 PANTHER PTHR10804:SF17 1 434 7.6E-165 T 22-04-2016 YE3396 5914ece40be1386d3ab34f236e8e700f 437 Gene3D G3DSA:3.90.230.10 179 434 5.1E-87 T 22-04-2016 IPR000994 Peptidase M24, structural domain YE3396 5914ece40be1386d3ab34f236e8e700f 437 Pfam PF00557 Metallopeptidase family M24 182 412 1.3E-65 T 22-04-2016 IPR000994 Peptidase M24, structural domain YE3396 5914ece40be1386d3ab34f236e8e700f 437 Gene3D G3DSA:3.40.350.10 2 178 1.7E-54 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal YE3396 5914ece40be1386d3ab34f236e8e700f 437 SUPERFAMILY SSF55920 175 434 1.28E-87 T 22-04-2016 IPR000994 Peptidase M24, structural domain YE2754 e76fac6881b7430781b51c0b7976b49f 327 PANTHER PTHR32196:SF39 8 327 1.4E-109 T 22-04-2016 YE2754 e76fac6881b7430781b51c0b7976b49f 327 Pfam PF02653 Branched-chain amino acid transport system / permease component 39 306 2.2E-35 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YE2754 e76fac6881b7430781b51c0b7976b49f 327 PANTHER PTHR32196 8 327 1.4E-109 T 22-04-2016 YE4047 d2ecfd4a6ffab66a124fc15d3ca6c0ca 399 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 6 392 2.2E-128 T 22-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like YE4047 d2ecfd4a6ffab66a124fc15d3ca6c0ca 399 PANTHER PTHR10617 2 286 4.5E-130 T 22-04-2016 YE4047 d2ecfd4a6ffab66a124fc15d3ca6c0ca 399 Gene3D G3DSA:1.10.8.260 270 322 3.7E-21 T 22-04-2016 IPR023166 HI0933 insert-like domain YE4047 d2ecfd4a6ffab66a124fc15d3ca6c0ca 399 Gene3D G3DSA:2.40.30.10 188 269 2.6E-28 T 22-04-2016 YE4047 d2ecfd4a6ffab66a124fc15d3ca6c0ca 399 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 164 3.8E-8 T 22-04-2016 YE4047 d2ecfd4a6ffab66a124fc15d3ca6c0ca 399 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 362 369 3.8E-8 T 22-04-2016 YE4047 d2ecfd4a6ffab66a124fc15d3ca6c0ca 399 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 3.8E-8 T 22-04-2016 YE4047 d2ecfd4a6ffab66a124fc15d3ca6c0ca 399 Gene3D G3DSA:3.50.50.60 339 395 3.5E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE4047 d2ecfd4a6ffab66a124fc15d3ca6c0ca 399 Gene3D G3DSA:3.50.50.60 3 186 3.5E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE4047 d2ecfd4a6ffab66a124fc15d3ca6c0ca 399 PANTHER PTHR10617:SF103 330 396 4.5E-130 T 22-04-2016 YE4047 d2ecfd4a6ffab66a124fc15d3ca6c0ca 399 PANTHER PTHR10617 330 396 4.5E-130 T 22-04-2016 YE4047 d2ecfd4a6ffab66a124fc15d3ca6c0ca 399 Pfam PF03486 HI0933-like protein 4 392 1.6E-154 T 22-04-2016 YE4047 d2ecfd4a6ffab66a124fc15d3ca6c0ca 399 SUPERFAMILY SSF160996 190 338 5.75E-43 T 22-04-2016 YE4047 d2ecfd4a6ffab66a124fc15d3ca6c0ca 399 PANTHER PTHR10617:SF103 2 286 4.5E-130 T 22-04-2016 YE4047 d2ecfd4a6ffab66a124fc15d3ca6c0ca 399 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 5.8E-5 T 22-04-2016 YE4047 d2ecfd4a6ffab66a124fc15d3ca6c0ca 399 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 347 369 5.8E-5 T 22-04-2016 YE4047 d2ecfd4a6ffab66a124fc15d3ca6c0ca 399 SUPERFAMILY SSF51905 3 188 3.15E-57 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE4047 d2ecfd4a6ffab66a124fc15d3ca6c0ca 399 SUPERFAMILY SSF51905 337 395 3.15E-57 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE2595 d8e8bca80415de58bb4fb22b9b191998 336 SUPERFAMILY SSF51735 122 298 5.86E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2595 d8e8bca80415de58bb4fb22b9b191998 336 Gene3D G3DSA:3.40.50.720 155 273 1.4E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2595 d8e8bca80415de58bb4fb22b9b191998 336 PANTHER PTHR11695:SF28 25 335 5.2E-135 T 22-04-2016 YE2595 d8e8bca80415de58bb4fb22b9b191998 336 PANTHER PTHR11695 25 335 5.2E-135 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 YE2595 d8e8bca80415de58bb4fb22b9b191998 336 Gene3D G3DSA:3.90.180.10 10 154 6.7E-47 T 22-04-2016 IPR011032 GroES-like YE2595 d8e8bca80415de58bb4fb22b9b191998 336 SMART SM00829 20 334 4.9E-58 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 YE2595 d8e8bca80415de58bb4fb22b9b191998 336 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 11 335 4.4E-149 T 22-04-2016 IPR014189 Quinone oxidoreductase PIG3 KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- YE2595 d8e8bca80415de58bb4fb22b9b191998 336 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 38 114 1.8E-10 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 YE2595 d8e8bca80415de58bb4fb22b9b191998 336 Pfam PF13602 Zinc-binding dehydrogenase 194 334 5.7E-27 T 22-04-2016 YE2595 d8e8bca80415de58bb4fb22b9b191998 336 SUPERFAMILY SSF50129 11 149 6.7E-38 T 22-04-2016 IPR011032 GroES-like YE3346 5be16bf25b2bba2a663f6f1ac234f222 149 Pfam PF08334 Type II secretion system (T2SS), protein G 32 137 2.9E-31 T 22-04-2016 IPR013545 Type II secretion system protein G YE3346 5be16bf25b2bba2a663f6f1ac234f222 149 PRINTS PR00813 Bacterial general secretion pathway protein G signature 44 62 9.3E-22 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 YE3346 5be16bf25b2bba2a663f6f1ac234f222 149 PRINTS PR00813 Bacterial general secretion pathway protein G signature 8 33 9.3E-22 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 YE3346 5be16bf25b2bba2a663f6f1ac234f222 149 PANTHER PTHR30093 1 137 1.1E-60 T 22-04-2016 YE3346 5be16bf25b2bba2a663f6f1ac234f222 149 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 28 4.5E-5 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site YE3346 5be16bf25b2bba2a663f6f1ac234f222 149 Gene3D G3DSA:3.30.700.10 9 73 2.5E-8 T 22-04-2016 YE3346 5be16bf25b2bba2a663f6f1ac234f222 149 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site YE3346 5be16bf25b2bba2a663f6f1ac234f222 149 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 7 137 4.9E-52 T 22-04-2016 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 YE3346 5be16bf25b2bba2a663f6f1ac234f222 149 PANTHER PTHR30093:SF9 1 137 1.1E-60 T 22-04-2016 YE3346 5be16bf25b2bba2a663f6f1ac234f222 149 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 5 26 3.0E-6 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site YE3346 5be16bf25b2bba2a663f6f1ac234f222 149 SUPERFAMILY SSF54523 35 138 1.31E-32 T 22-04-2016 YE0816 5d60f6e083d133762eaae2fec0699a1d 547 PANTHER PTHR30389 2 546 0.0 T 22-04-2016 YE0816 5d60f6e083d133762eaae2fec0699a1d 547 PANTHER PTHR30389:SF6 2 546 0.0 T 22-04-2016 YE0816 5d60f6e083d133762eaae2fec0699a1d 547 Gene3D G3DSA:3.20.130.10 348 537 1.4E-75 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 YE0816 5d60f6e083d133762eaae2fec0699a1d 547 PIRSF PIRSF001394 30 547 2.9E-230 T 22-04-2016 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 YE0816 5d60f6e083d133762eaae2fec0699a1d 547 Pfam PF05681 Fumarate hydratase (Fumerase) 51 325 6.4E-83 T 22-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 YE0816 5d60f6e083d133762eaae2fec0699a1d 547 Pfam PF05683 Fumarase C-terminus 332 537 1.3E-93 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 YE0816 5d60f6e083d133762eaae2fec0699a1d 547 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 75 323 5.9E-31 T 22-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 YE0816 5d60f6e083d133762eaae2fec0699a1d 547 ProSitePatterns PS00163 Fumarate lyases signature. 456 465 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 YE0816 5d60f6e083d133762eaae2fec0699a1d 547 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 373 537 1.3E-62 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 YE0816 5d60f6e083d133762eaae2fec0699a1d 547 SUPERFAMILY SSF117457 361 536 3.92E-62 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 YE2835 ab8b4e33718677a5e2b9ebf16760808a 175 ProSitePatterns PS00694 Enterobacterial virulence outer membrane protein signature 1. 47 55 - T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YE2835 ab8b4e33718677a5e2b9ebf16760808a 175 PANTHER PTHR35892 2 175 5.7E-121 T 22-04-2016 YE2835 ab8b4e33718677a5e2b9ebf16760808a 175 PANTHER PTHR35892:SF3 2 175 5.7E-121 T 22-04-2016 YE2835 ab8b4e33718677a5e2b9ebf16760808a 175 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 136 157 4.5E-36 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YE2835 ab8b4e33718677a5e2b9ebf16760808a 175 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 46 58 4.5E-36 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YE2835 ab8b4e33718677a5e2b9ebf16760808a 175 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 87 110 4.5E-36 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YE2835 ab8b4e33718677a5e2b9ebf16760808a 175 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 163 174 4.5E-36 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YE2835 ab8b4e33718677a5e2b9ebf16760808a 175 Gene3D G3DSA:2.40.160.20 26 175 1.1E-42 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YE2835 ab8b4e33718677a5e2b9ebf16760808a 175 SUPERFAMILY SSF56925 28 175 1.7E-30 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YE2835 ab8b4e33718677a5e2b9ebf16760808a 175 Pfam PF13505 Outer membrane protein beta-barrel domain 9 175 3.7E-23 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel YE3488 cebbce45caf348a2b3bd597a90735b50 116 TIGRFAM TIGR03745 conj_TIGR03745: integrating conjugative element membrane protein, PFL_4702 family 14 116 1.5E-41 T 22-04-2016 IPR021356 Integrating conjugative element protein PFL4702 YE3488 cebbce45caf348a2b3bd597a90735b50 116 Pfam PF11190 Protein of unknown function (DUF2976) 29 115 1.8E-31 T 22-04-2016 IPR021356 Integrating conjugative element protein PFL4702 YE1712 967a67d6a453d66942c1c20b64d6664f 415 PANTHER PTHR30489 3 415 9.3E-89 T 22-04-2016 YE1712 967a67d6a453d66942c1c20b64d6664f 415 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 6 415 1.8E-212 T 22-04-2016 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0006810|GO:0009276|GO:0016021 YE1712 967a67d6a453d66942c1c20b64d6664f 415 PANTHER PTHR30489:SF0 3 415 9.3E-89 T 22-04-2016 YE1712 967a67d6a453d66942c1c20b64d6664f 415 Pfam PF02687 FtsX-like permease family 275 408 5.8E-19 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 YE1712 967a67d6a453d66942c1c20b64d6664f 415 Pfam PF12704 MacB-like periplasmic core domain 28 239 5.4E-15 T 22-04-2016 IPR025857 MacB-like periplasmic core domain YE1712 967a67d6a453d66942c1c20b64d6664f 415 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 414 1.1E-157 T 22-04-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 YE3379 0fe6841424169b8b67ce7faa2e1ef479 238 SUPERFAMILY SSF54423 23 81 1.31E-18 T 22-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal YE3379 0fe6841424169b8b67ce7faa2e1ef479 238 Gene3D G3DSA:3.40.30.10 99 235 6.8E-49 T 22-04-2016 IPR012336 Thioredoxin-like fold YE3379 0fe6841424169b8b67ce7faa2e1ef479 238 ProSitePatterns PS00194 Thioredoxin family active site. 111 129 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 YE3379 0fe6841424169b8b67ce7faa2e1ef479 238 Pfam PF10411 Disulfide bond isomerase protein N-terminus 27 77 9.5E-16 T 22-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal YE3379 0fe6841424169b8b67ce7faa2e1ef479 238 PANTHER PTHR35272 5 237 1.9E-115 T 22-04-2016 YE3379 0fe6841424169b8b67ce7faa2e1ef479 238 SUPERFAMILY SSF52833 86 231 3.08E-41 T 22-04-2016 IPR012336 Thioredoxin-like fold YE3379 0fe6841424169b8b67ce7faa2e1ef479 238 Gene3D G3DSA:3.10.450.70 22 82 5.2E-28 T 22-04-2016 IPR009094 Disulphide bond isomerase, DsbC, N-terminal YE3379 0fe6841424169b8b67ce7faa2e1ef479 238 Pfam PF13098 Thioredoxin-like domain 105 227 3.2E-30 T 22-04-2016 IPR012336 Thioredoxin-like fold YE3379 0fe6841424169b8b67ce7faa2e1ef479 238 PANTHER PTHR35272:SF3 5 237 1.9E-115 T 22-04-2016 YE0311 31b0580a0c677838e10905b78cbf0bba 210 SUPERFAMILY SSF52172 2 132 6.12E-33 T 22-04-2016 IPR011006 CheY-like superfamily YE0311 31b0580a0c677838e10905b78cbf0bba 210 Pfam PF00072 Response regulator receiver domain 6 116 4.5E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE0311 31b0580a0c677838e10905b78cbf0bba 210 Gene3D G3DSA:1.10.10.10 122 208 7.9E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0311 31b0580a0c677838e10905b78cbf0bba 210 SMART SM00421 146 203 2.3E-19 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE0311 31b0580a0c677838e10905b78cbf0bba 210 Gene3D G3DSA:3.40.50.2300 2 121 1.3E-33 T 22-04-2016 YE0311 31b0580a0c677838e10905b78cbf0bba 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE0311 31b0580a0c677838e10905b78cbf0bba 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 202 3.6E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE0311 31b0580a0c677838e10905b78cbf0bba 210 SMART SM00448 3 116 4.1E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE0311 31b0580a0c677838e10905b78cbf0bba 210 PANTHER PTHR26402 3 210 2.3E-136 T 22-04-2016 YE0311 31b0580a0c677838e10905b78cbf0bba 210 SUPERFAMILY SSF46894 143 208 1.73E-19 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YE0311 31b0580a0c677838e10905b78cbf0bba 210 PANTHER PTHR26402:SF590 3 210 2.3E-136 T 22-04-2016 YE0311 31b0580a0c677838e10905b78cbf0bba 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 5.015778E-14 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE0311 31b0580a0c677838e10905b78cbf0bba 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 5.015778E-14 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE0311 31b0580a0c677838e10905b78cbf0bba 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 5.015778E-14 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE1148 c87bc5951e5e530772e1e0fc49c8948b 140 PANTHER PTHR30041 12 125 7.0E-39 T 22-04-2016 YE1148 c87bc5951e5e530772e1e0fc49c8948b 140 Pfam PF03960 ArsC family 13 122 3.4E-14 T 22-04-2016 IPR006660 Arsenate reductase-like YE1148 c87bc5951e5e530772e1e0fc49c8948b 140 Gene3D G3DSA:3.40.30.10 11 123 2.8E-41 T 22-04-2016 IPR012336 Thioredoxin-like fold YE1148 c87bc5951e5e530772e1e0fc49c8948b 140 PANTHER PTHR30041:SF3 12 125 7.0E-39 T 22-04-2016 YE1148 c87bc5951e5e530772e1e0fc49c8948b 140 SUPERFAMILY SSF52833 11 123 6.36E-31 T 22-04-2016 IPR012336 Thioredoxin-like fold YE1148 c87bc5951e5e530772e1e0fc49c8948b 140 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 11 123 9.6E-39 T 22-04-2016 IPR006504 Transcriptional regulator Spx/MgsR YE2747 0387de51a6183f52dd879f4c77fc61aa 412 PRINTS PR00471 Acetate kinase family signature 329 345 1.4E-41 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YE2747 0387de51a6183f52dd879f4c77fc61aa 412 PRINTS PR00471 Acetate kinase family signature 180 193 1.4E-41 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YE2747 0387de51a6183f52dd879f4c77fc61aa 412 PRINTS PR00471 Acetate kinase family signature 307 320 1.4E-41 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YE2747 0387de51a6183f52dd879f4c77fc61aa 412 PRINTS PR00471 Acetate kinase family signature 381 393 1.4E-41 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YE2747 0387de51a6183f52dd879f4c77fc61aa 412 PRINTS PR00471 Acetate kinase family signature 5 16 1.4E-41 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YE2747 0387de51a6183f52dd879f4c77fc61aa 412 PRINTS PR00471 Acetate kinase family signature 210 231 1.4E-41 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YE2747 0387de51a6183f52dd879f4c77fc61aa 412 Gene3D G3DSA:3.30.420.40 124 212 2.4E-7 T 22-04-2016 YE2747 0387de51a6183f52dd879f4c77fc61aa 412 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 210 227 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YE2747 0387de51a6183f52dd879f4c77fc61aa 412 PANTHER PTHR21060 1 409 1.1E-198 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YE2747 0387de51a6183f52dd879f4c77fc61aa 412 PIRSF PIRSF000722 1 403 2.4E-144 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YE2747 0387de51a6183f52dd879f4c77fc61aa 412 SUPERFAMILY SSF53067 4 202 2.46E-61 T 22-04-2016 YE2747 0387de51a6183f52dd879f4c77fc61aa 412 Hamap MF_01882 Probable propionate kinase [pduW]. 1 399 78.665 T 22-04-2016 IPR024896 Propionate kinase PduW GO:0008980|GO:0019543|GO:0051144 KEGG: 00640+2.7.2.15|MetaCyc: PWY-5437|MetaCyc: PWY-7013 YE2747 0387de51a6183f52dd879f4c77fc61aa 412 SUPERFAMILY SSF53067 165 399 1.2E-84 T 22-04-2016 YE2747 0387de51a6183f52dd879f4c77fc61aa 412 Pfam PF00871 Acetokinase family 4 394 6.4E-143 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YE2747 0387de51a6183f52dd879f4c77fc61aa 412 Hamap MF_00020 Acetate kinase [ackA]. 1 404 171.583 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YE2747 0387de51a6183f52dd879f4c77fc61aa 412 PANTHER PTHR21060:SF11 1 409 1.1E-198 T 22-04-2016 YE2747 0387de51a6183f52dd879f4c77fc61aa 412 Gene3D G3DSA:3.30.420.40 213 399 1.2E-75 T 22-04-2016 YE2747 0387de51a6183f52dd879f4c77fc61aa 412 TIGRFAM TIGR00016 ackA: acetate kinase 3 399 2.1E-150 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YE2747 0387de51a6183f52dd879f4c77fc61aa 412 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YE3904 e34d84d1e046af74aec80a2293155302 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 22-04-2016 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3904 e34d84d1e046af74aec80a2293155302 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 19.213 T 22-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 YE3904 e34d84d1e046af74aec80a2293155302 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 7.7E-31 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P YE3904 e34d84d1e046af74aec80a2293155302 144 Gene3D G3DSA:3.100.10.10 32 143 1.3E-25 T 22-04-2016 YE3904 e34d84d1e046af74aec80a2293155302 144 SUPERFAMILY SSF52080 4 143 1.7E-46 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P YE3904 e34d84d1e046af74aec80a2293155302 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 5.8E-51 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 YE3904 e34d84d1e046af74aec80a2293155302 144 PANTHER PTHR12934 1 144 1.7E-76 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 YE3636 b85cf5fc1b28075389bdc1348494d77a 453 PRINTS PR00811 Bacterial general secretion pathway protein D signature 370 388 1.3E-5 T 22-04-2016 IPR001775 GspD/PilQ family YE3636 b85cf5fc1b28075389bdc1348494d77a 453 PRINTS PR00811 Bacterial general secretion pathway protein D signature 193 203 1.3E-5 T 22-04-2016 IPR001775 GspD/PilQ family YE3636 b85cf5fc1b28075389bdc1348494d77a 453 Pfam PF00263 Bacterial type II and III secretion system protein 248 405 4.0E-38 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 YE3636 b85cf5fc1b28075389bdc1348494d77a 453 PANTHER PTHR30332 178 419 1.7E-46 T 22-04-2016 YE3636 b85cf5fc1b28075389bdc1348494d77a 453 Pfam PF13629 Pilus formation protein N terminal region 32 101 1.5E-11 T 22-04-2016 IPR032789 Pilus formation protein, N-terminal YE0288 217beb62f9cf279ee10997d296e6b670 444 PANTHER PTHR37529 3 431 3.3E-77 T 22-04-2016 YE0288 217beb62f9cf279ee10997d296e6b670 444 Pfam PF01609 Transposase DDE domain 128 352 2.4E-30 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 YE0288 217beb62f9cf279ee10997d296e6b670 444 SUPERFAMILY SSF53098 108 408 5.76E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE0288 217beb62f9cf279ee10997d296e6b670 444 Pfam PF13006 Insertion element 4 transposase N-terminal 19 108 1.3E-30 T 22-04-2016 IPR024473 Transposase, IS4, N-terminal YE0684 62bd465d9af2d097e12b5644e109d8ee 250 Pfam PF07072 Protein of unknown function (DUF1342) 22 228 5.2E-78 T 22-04-2016 IPR009777 Cell division protein ZapD YE0684 62bd465d9af2d097e12b5644e109d8ee 250 SUPERFAMILY SSF160950 6 250 1.57E-91 T 22-04-2016 YE0684 62bd465d9af2d097e12b5644e109d8ee 250 Gene3D G3DSA:2.60.440.10 177 250 1.3E-33 T 22-04-2016 IPR027462 Z ring-associated protein D, C-terminal domain YE0684 62bd465d9af2d097e12b5644e109d8ee 250 Gene3D G3DSA:1.10.3900.10 16 176 1.6E-64 T 22-04-2016 YE0684 62bd465d9af2d097e12b5644e109d8ee 250 PANTHER PTHR39455 4 250 3.5E-119 T 22-04-2016 YE0684 62bd465d9af2d097e12b5644e109d8ee 250 Hamap MF_01092 Cell division protein ZapD [zapD]. 7 250 32.812 T 22-04-2016 IPR009777 Cell division protein ZapD YE0684 62bd465d9af2d097e12b5644e109d8ee 250 PANTHER PTHR39455:SF1 4 250 3.5E-119 T 22-04-2016 YE2685 6118bc7dcb9a7df42b2e62bc614bf26f 1277 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 73 1267 3.4E-240 T 22-04-2016 IPR017731 Type VI secretion system, IcmF YE2685 6118bc7dcb9a7df42b2e62bc614bf26f 1277 Pfam PF14331 ImcF-related N-terminal domain 253 534 5.3E-72 T 22-04-2016 IPR025743 ImcF-related, N-terminal domain YE2685 6118bc7dcb9a7df42b2e62bc614bf26f 1277 Pfam PF06761 Intracellular multiplication and human macrophage-killing 585 897 3.4E-67 T 22-04-2016 IPR009612 ImcF-related YE2685 6118bc7dcb9a7df42b2e62bc614bf26f 1277 PANTHER PTHR36153 47 1273 0.0 T 22-04-2016 YE2685 6118bc7dcb9a7df42b2e62bc614bf26f 1277 PANTHER PTHR36153:SF3 47 1273 0.0 T 22-04-2016 YE2685 6118bc7dcb9a7df42b2e62bc614bf26f 1277 SUPERFAMILY SSF52540 181 384 5.34E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2685 6118bc7dcb9a7df42b2e62bc614bf26f 1277 Pfam PF06744 Type VI secretion protein IcmF C-terminal 1024 1215 2.4E-44 T 22-04-2016 IPR010623 Type VI secretion system IcmF, C-terminal YE0252 4c5ffd562af0b9071982da949a81fb9c 265 PANTHER PTHR31126:SF21 121 265 8.1E-64 T 22-04-2016 YE0252 4c5ffd562af0b9071982da949a81fb9c 265 PANTHER PTHR31126:SF21 12 91 8.1E-64 T 22-04-2016 YE0252 4c5ffd562af0b9071982da949a81fb9c 265 Gene3D G3DSA:3.90.190.10 15 203 9.2E-14 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like YE0252 4c5ffd562af0b9071982da949a81fb9c 265 Pfam PF13350 Tyrosine phosphatase family 13 265 1.2E-59 T 22-04-2016 IPR026893 Tyrosine/serine-protein phosphatase IphP-type YE0252 4c5ffd562af0b9071982da949a81fb9c 265 SUPERFAMILY SSF52799 12 264 2.51E-47 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like YE0252 4c5ffd562af0b9071982da949a81fb9c 265 PANTHER PTHR31126 121 265 8.1E-64 T 22-04-2016 YE0252 4c5ffd562af0b9071982da949a81fb9c 265 PANTHER PTHR31126 12 91 8.1E-64 T 22-04-2016 YE0429 90cec450c8aa51e872039bc6221dff19 277 SUPERFAMILY SSF51717 5 274 1.83E-106 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 YE0429 90cec450c8aa51e872039bc6221dff19 277 PANTHER PTHR20941:SF1 4 277 7.3E-128 T 22-04-2016 YE0429 90cec450c8aa51e872039bc6221dff19 277 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 16 271 1.2E-102 T 22-04-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 YE0429 90cec450c8aa51e872039bc6221dff19 277 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 17 32 - T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 YE0429 90cec450c8aa51e872039bc6221dff19 277 Pfam PF00809 Pterin binding enzyme 18 257 1.7E-88 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 YE0429 90cec450c8aa51e872039bc6221dff19 277 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 51 64 - T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 YE0429 90cec450c8aa51e872039bc6221dff19 277 PANTHER PTHR20941 4 277 7.3E-128 T 22-04-2016 YE0429 90cec450c8aa51e872039bc6221dff19 277 Gene3D G3DSA:3.20.20.20 12 273 1.3E-110 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 YE3804 9592ea5fd3b18b3629e83403156ebf0c 328 PANTHER PTHR34138 1 317 1.1E-99 T 22-04-2016 YE3804 9592ea5fd3b18b3629e83403156ebf0c 328 Pfam PF04085 rod shape-determining protein MreC 123 269 1.2E-37 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 YE3804 9592ea5fd3b18b3629e83403156ebf0c 328 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 277 1.5E-115 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 YE3804 9592ea5fd3b18b3629e83403156ebf0c 328 PANTHER PTHR34138:SF1 1 317 1.1E-99 T 22-04-2016 YE3804 9592ea5fd3b18b3629e83403156ebf0c 328 PIRSF PIRSF038471 2 284 2.3E-75 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 YE3941 a1d47786db980afa796fc5f76e4827a4 184 PANTHER PTHR10204:SF42 6 176 3.5E-86 T 22-04-2016 YE3941 a1d47786db980afa796fc5f76e4827a4 184 Hamap MF_01415 Glutathione-regulated potassium-efflux system ancillary protein KefG [kefG]. 2 183 50.899 T 22-04-2016 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 YE3941 a1d47786db980afa796fc5f76e4827a4 184 PANTHER PTHR10204 6 176 3.5E-86 T 22-04-2016 YE3941 a1d47786db980afa796fc5f76e4827a4 184 Pfam PF02525 Flavodoxin-like fold 7 174 3.8E-40 T 22-04-2016 IPR003680 Flavodoxin-like fold YE3941 a1d47786db980afa796fc5f76e4827a4 184 Gene3D G3DSA:3.40.50.360 7 177 2.0E-46 T 22-04-2016 IPR029039 Flavoprotein-like domain YE3941 a1d47786db980afa796fc5f76e4827a4 184 SUPERFAMILY SSF52218 6 177 9.54E-48 T 22-04-2016 IPR029039 Flavoprotein-like domain YE0303 4d75104d1da3a0f2d5f8e9dcf2bd07d7 529 Gene3D G3DSA:3.40.140.20 253 372 1.2E-50 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 YE0303 4d75104d1da3a0f2d5f8e9dcf2bd07d7 529 SMART SM00851 19 132 1.3E-60 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain YE0303 4d75104d1da3a0f2d5f8e9dcf2bd07d7 529 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 460 6.6E-120 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 YE0303 4d75104d1da3a0f2d5f8e9dcf2bd07d7 529 SUPERFAMILY SSF53927 221 529 2.71E-130 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 YE0303 4d75104d1da3a0f2d5f8e9dcf2bd07d7 529 PIRSF PIRSF000414 1 529 1.6E-227 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 YE0303 4d75104d1da3a0f2d5f8e9dcf2bd07d7 529 SMART SM00798 137 461 8.6E-218 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 YE0303 4d75104d1da3a0f2d5f8e9dcf2bd07d7 529 Gene3D G3DSA:3.40.50.1380 5 190 2.0E-85 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain YE0303 4d75104d1da3a0f2d5f8e9dcf2bd07d7 529 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 529 45.699 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 YE0303 4d75104d1da3a0f2d5f8e9dcf2bd07d7 529 SUPERFAMILY SSF52335 7 196 7.46E-71 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain YE0303 4d75104d1da3a0f2d5f8e9dcf2bd07d7 529 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 529 4.7E-263 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 YE0303 4d75104d1da3a0f2d5f8e9dcf2bd07d7 529 Pfam PF02142 MGS-like domain 19 132 6.2E-29 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain YE0303 4d75104d1da3a0f2d5f8e9dcf2bd07d7 529 PANTHER PTHR11692 5 529 0.0 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 YE0303 4d75104d1da3a0f2d5f8e9dcf2bd07d7 529 Gene3D G3DSA:3.40.140.20 377 519 1.7E-59 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 YE0402 2808b7a3f2c3b94dded0710d8ac66947 67 Pfam PF06526 Protein of unknown function (DUF1107) 1 63 3.9E-30 T 22-04-2016 IPR009491 Protein of unknown function DUF1107 YE0402 2808b7a3f2c3b94dded0710d8ac66947 67 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 65 2.0E-29 T 22-04-2016 IPR009491 Protein of unknown function DUF1107 YE0402 2808b7a3f2c3b94dded0710d8ac66947 67 Gene3D G3DSA:3.30.1910.10 1 65 4.5E-36 T 22-04-2016 YE2591 45897a1e2eeaeb311f03f586e22a22c7 344 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 7 17 1.1E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE2591 45897a1e2eeaeb311f03f586e22a22c7 344 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 17 27 1.1E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE2591 45897a1e2eeaeb311f03f586e22a22c7 344 SUPERFAMILY SSF53822 65 336 1.81E-60 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YE2591 45897a1e2eeaeb311f03f586e22a22c7 344 PANTHER PTHR30146:SF34 4 337 2.3E-134 T 22-04-2016 YE2591 45897a1e2eeaeb311f03f586e22a22c7 344 Gene3D G3DSA:3.40.50.2300 67 177 3.6E-36 T 22-04-2016 YE2591 45897a1e2eeaeb311f03f586e22a22c7 344 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE2591 45897a1e2eeaeb311f03f586e22a22c7 344 Gene3D G3DSA:1.10.260.40 6 66 1.4E-23 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE2591 45897a1e2eeaeb311f03f586e22a22c7 344 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 52 5.0E-20 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE2591 45897a1e2eeaeb311f03f586e22a22c7 344 PANTHER PTHR30146 4 337 2.3E-134 T 22-04-2016 YE2591 45897a1e2eeaeb311f03f586e22a22c7 344 SUPERFAMILY SSF47413 5 63 1.72E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE2591 45897a1e2eeaeb311f03f586e22a22c7 344 SMART SM00354 5 75 2.1E-31 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE2591 45897a1e2eeaeb311f03f586e22a22c7 344 Gene3D G3DSA:3.40.50.2300 178 312 2.7E-44 T 22-04-2016 YE2591 45897a1e2eeaeb311f03f586e22a22c7 344 Pfam PF13377 Periplasmic binding protein-like domain 174 333 6.4E-38 T 22-04-2016 YE1929 12b80832a049e8776fd9554b5480de75 92 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 6 92 1.1E-30 T 22-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family YE1929 12b80832a049e8776fd9554b5480de75 92 SUPERFAMILY SSF143011 5 92 7.19E-27 T 22-04-2016 YE1929 12b80832a049e8776fd9554b5480de75 92 PIRSF PIRSF006156 4 92 7.4E-28 T 22-04-2016 IPR004386 Toxin-antitoxin system, YafQ-like toxin YE1929 12b80832a049e8776fd9554b5480de75 92 Pfam PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ 5 92 1.9E-34 T 22-04-2016 IPR004386 Toxin-antitoxin system, YafQ-like toxin YE1929 12b80832a049e8776fd9554b5480de75 92 TIGRFAM TIGR00053 TIGR00053: addiction module toxin component, YafQ family 4 92 1.7E-33 T 22-04-2016 IPR004386 Toxin-antitoxin system, YafQ-like toxin YE1929 12b80832a049e8776fd9554b5480de75 92 PANTHER PTHR40588 1 92 1.6E-33 T 22-04-2016 YE3744 3b132303146d2807d57614b8fb8db61e 457 Gene3D G3DSA:2.30.42.10 271 364 5.0E-31 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YE3744 3b132303146d2807d57614b8fb8db61e 457 PANTHER PTHR22939:SF101 1 457 9.2E-207 T 22-04-2016 YE3744 3b132303146d2807d57614b8fb8db61e 457 Gene3D G3DSA:2.30.42.10 390 454 9.0E-18 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YE3744 3b132303146d2807d57614b8fb8db61e 457 SUPERFAMILY SSF50156 382 456 1.31E-15 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YE3744 3b132303146d2807d57614b8fb8db61e 457 SMART SM00228 269 351 3.5E-13 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YE3744 3b132303146d2807d57614b8fb8db61e 457 SMART SM00228 352 449 1.2E-10 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YE3744 3b132303146d2807d57614b8fb8db61e 457 SUPERFAMILY SSF50494 40 265 7.28E-65 T 22-04-2016 IPR009003 Peptidase S1, PA clan YE3744 3b132303146d2807d57614b8fb8db61e 457 Gene3D G3DSA:2.40.10.10 40 157 1.3E-35 T 22-04-2016 YE3744 3b132303146d2807d57614b8fb8db61e 457 PRINTS PR00834 HtrA/DegQ protease family signature 201 218 3.5E-58 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YE3744 3b132303146d2807d57614b8fb8db61e 457 PRINTS PR00834 HtrA/DegQ protease family signature 125 145 3.5E-58 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YE3744 3b132303146d2807d57614b8fb8db61e 457 PRINTS PR00834 HtrA/DegQ protease family signature 223 240 3.5E-58 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YE3744 3b132303146d2807d57614b8fb8db61e 457 PRINTS PR00834 HtrA/DegQ protease family signature 309 321 3.5E-58 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YE3744 3b132303146d2807d57614b8fb8db61e 457 PRINTS PR00834 HtrA/DegQ protease family signature 104 116 3.5E-58 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YE3744 3b132303146d2807d57614b8fb8db61e 457 PRINTS PR00834 HtrA/DegQ protease family signature 166 190 3.5E-58 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YE3744 3b132303146d2807d57614b8fb8db61e 457 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 41 455 3.8E-160 T 22-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 YE3744 3b132303146d2807d57614b8fb8db61e 457 PANTHER PTHR22939 1 457 9.2E-207 T 22-04-2016 YE3744 3b132303146d2807d57614b8fb8db61e 457 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 376 445 1.7E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YE3744 3b132303146d2807d57614b8fb8db61e 457 Pfam PF13365 Trypsin-like peptidase domain 94 230 4.2E-33 T 22-04-2016 YE3744 3b132303146d2807d57614b8fb8db61e 457 SUPERFAMILY SSF50156 227 352 1.3E-23 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YE3744 3b132303146d2807d57614b8fb8db61e 457 Pfam PF13180 PDZ domain 280 360 1.4E-15 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YE3744 3b132303146d2807d57614b8fb8db61e 457 Gene3D G3DSA:2.40.10.10 158 270 4.2E-43 T 22-04-2016 YE1526 479499ecce95a5840015526d0ef21a75 203 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 9 201 31.526 T 22-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 YE1526 479499ecce95a5840015526d0ef21a75 203 PANTHER PTHR35869 1 203 4.6E-62 T 22-04-2016 YE1526 479499ecce95a5840015526d0ef21a75 203 Gene3D G3DSA:2.50.20.10 23 203 9.2E-61 T 22-04-2016 YE1526 479499ecce95a5840015526d0ef21a75 203 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 33 191 7.0E-59 T 22-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like YE1526 479499ecce95a5840015526d0ef21a75 203 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 1 203 1.2E-97 T 22-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 YE1526 479499ecce95a5840015526d0ef21a75 203 SUPERFAMILY SSF89392 23 202 6.28E-56 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX YE2987 7bc79b5fce610e0c23c5a863bab19141 157 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 114 124 - T 22-04-2016 IPR020549 Endoribonuclease YbeY, conserved site YE2987 7bc79b5fce610e0c23c5a863bab19141 157 SUPERFAMILY SSF55486 3 151 7.81E-49 T 22-04-2016 YE2987 7bc79b5fce610e0c23c5a863bab19141 157 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 5 148 23.97 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 YE2987 7bc79b5fce610e0c23c5a863bab19141 157 Gene3D G3DSA:3.40.390.30 12 153 4.9E-50 T 22-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 YE2987 7bc79b5fce610e0c23c5a863bab19141 157 Pfam PF02130 Uncharacterized protein family UPF0054 20 144 1.1E-38 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 YE2987 7bc79b5fce610e0c23c5a863bab19141 157 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 40 145 5.3E-36 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 YE2987 7bc79b5fce610e0c23c5a863bab19141 157 PANTHER PTHR22881 2 154 6.7E-67 T 22-04-2016 YE1288 af299644f0feb994757eb83538070b1d 335 SUPERFAMILY SSF55785 23 137 1.29E-24 T 22-04-2016 IPR000014 PAS domain YE1288 af299644f0feb994757eb83538070b1d 335 PANTHER PTHR10799:SF750 212 334 6.4E-27 T 22-04-2016 YE1288 af299644f0feb994757eb83538070b1d 335 PANTHER PTHR10799:SF750 12 143 6.4E-27 T 22-04-2016 YE1288 af299644f0feb994757eb83538070b1d 335 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 179 333 4.1E-46 T 22-04-2016 IPR000160 GGDEF domain YE1288 af299644f0feb994757eb83538070b1d 335 SMART SM00267 165 335 5.1E-48 T 22-04-2016 IPR000160 GGDEF domain YE1288 af299644f0feb994757eb83538070b1d 335 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 21 142 1.0E-12 T 22-04-2016 IPR000014 PAS domain YE1288 af299644f0feb994757eb83538070b1d 335 Gene3D G3DSA:3.30.450.20 17 151 7.9E-33 T 22-04-2016 YE1288 af299644f0feb994757eb83538070b1d 335 Pfam PF08447 PAS fold 41 129 5.1E-25 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 YE1288 af299644f0feb994757eb83538070b1d 335 Gene3D G3DSA:3.30.70.270 181 331 4.5E-47 T 22-04-2016 YE1288 af299644f0feb994757eb83538070b1d 335 Pfam PF00990 Diguanylate cyclase, GGDEF domain 180 331 4.2E-42 T 22-04-2016 IPR000160 GGDEF domain YE1288 af299644f0feb994757eb83538070b1d 335 SMART SM00091 18 86 7.3E-5 T 22-04-2016 IPR000014 PAS domain YE1288 af299644f0feb994757eb83538070b1d 335 SUPERFAMILY SSF55073 184 333 8.63E-44 T 22-04-2016 IPR029787 Nucleotide cyclase YE1288 af299644f0feb994757eb83538070b1d 335 SMART SM00086 93 136 8.4E-8 T 22-04-2016 IPR001610 PAC motif YE1288 af299644f0feb994757eb83538070b1d 335 PANTHER PTHR10799 212 334 6.4E-27 T 22-04-2016 YE1288 af299644f0feb994757eb83538070b1d 335 PANTHER PTHR10799 12 143 6.4E-27 T 22-04-2016 YE1829 24989e7542edcd9945615ee05b1dd6c2 182 PANTHER PTHR14269 2 179 2.5E-105 T 22-04-2016 YE1829 24989e7542edcd9945615ee05b1dd6c2 182 PANTHER PTHR14269:SF13 2 179 2.5E-105 T 22-04-2016 YE1829 24989e7542edcd9945615ee05b1dd6c2 182 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 180 7.0E-60 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 YE1829 24989e7542edcd9945615ee05b1dd6c2 182 Hamap MF_01437 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [pgsA]. 1 182 32.745 T 22-04-2016 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 YE1829 24989e7542edcd9945615ee05b1dd6c2 182 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 YE1829 24989e7542edcd9945615ee05b1dd6c2 182 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 2.4E-17 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 YE1829 24989e7542edcd9945615ee05b1dd6c2 182 PIRSF PIRSF000847 1 181 1.2E-43 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 YE3570 22158017a04dfc88be54507c4d512099 120 Gene3D G3DSA:3.30.1300.30 31 118 1.4E-28 T 22-04-2016 YE3570 22158017a04dfc88be54507c4d512099 120 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 4 24 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site YE3570 22158017a04dfc88be54507c4d512099 120 PANTHER PTHR38779:SF2 1 119 8.9E-32 T 22-04-2016 YE3570 22158017a04dfc88be54507c4d512099 120 TIGRFAM TIGR01707 gspI: type II secretion system protein I 5 103 3.4E-24 T 22-04-2016 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 YE3570 22158017a04dfc88be54507c4d512099 120 Pfam PF13633 Prokaryotic N-terminal methylation site 3 28 2.6E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site YE3570 22158017a04dfc88be54507c4d512099 120 SUPERFAMILY SSF54523 37 118 1.77E-24 T 22-04-2016 YE3570 22158017a04dfc88be54507c4d512099 120 Pfam PF02501 Type II secretion system (T2SS), protein I 39 116 6.8E-24 T 22-04-2016 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 YE3570 22158017a04dfc88be54507c4d512099 120 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 25 8.7E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site YE3570 22158017a04dfc88be54507c4d512099 120 PANTHER PTHR38779 1 119 8.9E-32 T 22-04-2016 YE1086 6bf6622c42eb7f1817e846d4c063502f 417 PANTHER PTHR35008:SF5 20 417 7.7E-123 T 22-04-2016 YE1086 6bf6622c42eb7f1817e846d4c063502f 417 PIRSF PIRSF000018 2 417 2.3E-153 T 22-04-2016 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 YE1086 6bf6622c42eb7f1817e846d4c063502f 417 Pfam PF00034 Cytochrome c 28 126 1.1E-6 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 YE1086 6bf6622c42eb7f1817e846d4c063502f 417 SUPERFAMILY SSF46626 14 150 1.3E-23 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 YE1086 6bf6622c42eb7f1817e846d4c063502f 417 SUPERFAMILY SSF46626 303 412 7.16E-20 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 YE1086 6bf6622c42eb7f1817e846d4c063502f 417 Gene3D G3DSA:1.10.760.10 25 127 1.6E-16 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 YE1086 6bf6622c42eb7f1817e846d4c063502f 417 Gene3D G3DSA:1.10.760.10 169 278 9.4E-11 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 YE1086 6bf6622c42eb7f1817e846d4c063502f 417 PANTHER PTHR35008 20 417 7.7E-123 T 22-04-2016 YE1086 6bf6622c42eb7f1817e846d4c063502f 417 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 313 395 4.7E-7 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 YE1086 6bf6622c42eb7f1817e846d4c063502f 417 Gene3D G3DSA:1.10.760.10 315 416 3.2E-19 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 YE1086 6bf6622c42eb7f1817e846d4c063502f 417 SUPERFAMILY SSF46626 162 282 6.4E-16 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 YE3774 b28f39b249e52985d17c1d5c6163e431 471 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 YE3774 b28f39b249e52985d17c1d5c6163e431 471 Gene3D G3DSA:3.30.1360.60 6 83 4.9E-24 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YE3774 b28f39b249e52985d17c1d5c6163e431 471 SUPERFAMILY SSF55604 10 81 3.01E-19 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YE3774 b28f39b249e52985d17c1d5c6163e431 471 PANTHER PTHR30175:SF4 1 463 4.4E-266 T 22-04-2016 YE3774 b28f39b249e52985d17c1d5c6163e431 471 Pfam PF00367 phosphotransferase system, EIIB 11 42 9.9E-13 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 YE3774 b28f39b249e52985d17c1d5c6163e431 471 Pfam PF02378 Phosphotransferase system, EIIC 112 404 4.0E-33 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 YE3774 b28f39b249e52985d17c1d5c6163e431 471 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 6 460 2.0E-210 T 22-04-2016 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 YE3774 b28f39b249e52985d17c1d5c6163e431 471 PANTHER PTHR30175 1 463 4.4E-266 T 22-04-2016 YE3774 b28f39b249e52985d17c1d5c6163e431 471 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 30 111 5.9E-16 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YE0621 2b8bcd91f8c4455ca72bf99ec400621c 387 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 375 2.3E-150 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YE0621 2b8bcd91f8c4455ca72bf99ec400621c 387 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 194 208 9.9E-41 T 22-04-2016 YE0621 2b8bcd91f8c4455ca72bf99ec400621c 387 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 9.9E-41 T 22-04-2016 YE0621 2b8bcd91f8c4455ca72bf99ec400621c 387 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 9.9E-41 T 22-04-2016 YE0621 2b8bcd91f8c4455ca72bf99ec400621c 387 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 233 247 9.9E-41 T 22-04-2016 YE0621 2b8bcd91f8c4455ca72bf99ec400621c 387 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 9.9E-41 T 22-04-2016 YE0621 2b8bcd91f8c4455ca72bf99ec400621c 387 Gene3D G3DSA:3.50.30.20 4 147 1.7E-62 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YE0621 2b8bcd91f8c4455ca72bf99ec400621c 387 PRINTS PR00097 Anthranilate synthase component II signature 349 362 1.2E-5 T 22-04-2016 YE0621 2b8bcd91f8c4455ca72bf99ec400621c 387 PRINTS PR00097 Anthranilate synthase component II signature 236 245 1.2E-5 T 22-04-2016 YE0621 2b8bcd91f8c4455ca72bf99ec400621c 387 PRINTS PR00097 Anthranilate synthase component II signature 264 275 1.2E-5 T 22-04-2016 YE0621 2b8bcd91f8c4455ca72bf99ec400621c 387 SUPERFAMILY SSF52021 3 143 6.67E-57 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YE0621 2b8bcd91f8c4455ca72bf99ec400621c 387 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 48.496 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YE0621 2b8bcd91f8c4455ca72bf99ec400621c 387 SUPERFAMILY SSF52317 153 378 1.36E-63 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YE0621 2b8bcd91f8c4455ca72bf99ec400621c 387 Pfam PF00117 Glutamine amidotransferase class-I 197 372 8.7E-49 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 YE0621 2b8bcd91f8c4455ca72bf99ec400621c 387 PANTHER PTHR11405 3 170 8.3E-259 T 22-04-2016 YE0621 2b8bcd91f8c4455ca72bf99ec400621c 387 PANTHER PTHR11405 186 383 8.3E-259 T 22-04-2016 YE0621 2b8bcd91f8c4455ca72bf99ec400621c 387 SMART SM01097 3 133 1.2E-90 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YE0621 2b8bcd91f8c4455ca72bf99ec400621c 387 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 6.2E-52 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YE0621 2b8bcd91f8c4455ca72bf99ec400621c 387 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 3.3E-11 T 22-04-2016 YE0621 2b8bcd91f8c4455ca72bf99ec400621c 387 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 3.3E-11 T 22-04-2016 YE0621 2b8bcd91f8c4455ca72bf99ec400621c 387 PRINTS PR00096 Glutamine amidotransferase superfamily signature 236 245 3.3E-11 T 22-04-2016 YE0621 2b8bcd91f8c4455ca72bf99ec400621c 387 Gene3D G3DSA:3.40.50.880 154 378 2.6E-83 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YE1732 30d77976a42447d228a89cbb9f2f0512 422 PANTHER PTHR11076:SF40 1 381 1.6E-180 T 22-04-2016 YE1732 30d77976a42447d228a89cbb9f2f0512 422 Pfam PF00817 impB/mucB/samB family 5 150 2.6E-33 T 22-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE1732 30d77976a42447d228a89cbb9f2f0512 422 Gene3D G3DSA:1.10.150.20 168 239 8.5E-22 T 22-04-2016 YE1732 30d77976a42447d228a89cbb9f2f0512 422 Gene3D G3DSA:3.30.70.270 68 154 1.2E-21 T 22-04-2016 YE1732 30d77976a42447d228a89cbb9f2f0512 422 Pfam PF13438 Domain of unknown function (DUF4113) 370 417 7.5E-18 T 22-04-2016 IPR025188 Domain of unknown function DUF4113 YE1732 30d77976a42447d228a89cbb9f2f0512 422 PANTHER PTHR11076 1 381 1.6E-180 T 22-04-2016 YE1732 30d77976a42447d228a89cbb9f2f0512 422 Pfam PF11798 IMS family HHH motif 172 199 1.4E-6 T 22-04-2016 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE1732 30d77976a42447d228a89cbb9f2f0512 422 Pfam PF11799 impB/mucB/samB family C-terminal domain 242 351 1.3E-13 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE1732 30d77976a42447d228a89cbb9f2f0512 422 Gene3D G3DSA:3.30.1490.100 248 352 3.0E-5 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE1732 30d77976a42447d228a89cbb9f2f0512 422 SUPERFAMILY SSF56672 1 236 5.96E-67 T 22-04-2016 YE1732 30d77976a42447d228a89cbb9f2f0512 422 SUPERFAMILY SSF100879 248 334 2.88E-6 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE3946 0289100dc26016e2d6c87e41b4fb4a95 267 PANTHER PTHR30151:SF0 16 267 1.5E-121 T 22-04-2016 YE3946 0289100dc26016e2d6c87e41b4fb4a95 267 Gene3D G3DSA:1.10.3720.10 63 261 1.2E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE3946 0289100dc26016e2d6c87e41b4fb4a95 267 SUPERFAMILY SSF161098 67 249 8.37E-36 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE3946 0289100dc26016e2d6c87e41b4fb4a95 267 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 261 1.8E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE3946 0289100dc26016e2d6c87e41b4fb4a95 267 PANTHER PTHR30151 16 267 1.5E-121 T 22-04-2016 YE2171 a565d9ab60eb491ac597030c37bdcbfb 503 SUPERFAMILY SSF101960 41 86 1.44E-134 T 22-04-2016 YE2171 a565d9ab60eb491ac597030c37bdcbfb 503 SUPERFAMILY SSF101960 133 500 1.44E-134 T 22-04-2016 YE2171 a565d9ab60eb491ac597030c37bdcbfb 503 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 21 494 1.1E-192 T 22-04-2016 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 YE2171 a565d9ab60eb491ac597030c37bdcbfb 503 Pfam PF01458 Uncharacterized protein family (UPF0051) 242 474 2.2E-67 T 22-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 YE2171 a565d9ab60eb491ac597030c37bdcbfb 503 PANTHER PTHR30508 119 503 1.9E-289 T 22-04-2016 YE2171 a565d9ab60eb491ac597030c37bdcbfb 503 PANTHER PTHR30508 15 99 1.9E-289 T 22-04-2016 YE2171 a565d9ab60eb491ac597030c37bdcbfb 503 PANTHER PTHR30508:SF1 119 503 1.9E-289 T 22-04-2016 YE2171 a565d9ab60eb491ac597030c37bdcbfb 503 PANTHER PTHR30508:SF1 15 99 1.9E-289 T 22-04-2016 YE0397 b33ec6949ca25ea86727958e26bcaad1 257 Pfam PF04225 Opacity-associated protein A LysM-like domain 172 256 1.9E-37 T 22-04-2016 IPR007340 Opacity-associated protein A YE0397 b33ec6949ca25ea86727958e26bcaad1 257 Pfam PF08525 Opacity-associated protein A N-terminal motif 94 120 1.4E-6 T 22-04-2016 IPR013731 Opacity-associated protein A, N-terminal YE2784 b2fa8861eb8779201afcba545cd126c7 370 SUPERFAMILY SSF52540 109 356 5.0E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2784 b2fa8861eb8779201afcba545cd126c7 370 Hamap MF_02040 Iron-sulfur cluster carrier protein. 102 351 37.096 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein YE2784 b2fa8861eb8779201afcba545cd126c7 370 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 107 350 1.3E-100 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein YE2784 b2fa8861eb8779201afcba545cd126c7 370 PANTHER PTHR23264:SF19 9 368 1.4E-194 T 22-04-2016 YE2784 b2fa8861eb8779201afcba545cd126c7 370 PANTHER PTHR23264 9 368 1.4E-194 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein YE2784 b2fa8861eb8779201afcba545cd126c7 370 Gene3D G3DSA:3.40.50.300 96 350 5.2E-104 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2784 b2fa8861eb8779201afcba545cd126c7 370 ProSitePatterns PS01215 Mrp family signature. 214 230 - T 22-04-2016 IPR000808 Mrp, conserved site GO:0005524 YE3823 bf668bd46370239ba10ec2935e31fd9c 70 PRINTS PR00050 Cold shock protein signature 43 61 1.7E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YE3823 bf668bd46370239ba10ec2935e31fd9c 70 PRINTS PR00050 Cold shock protein signature 28 37 1.7E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YE3823 bf668bd46370239ba10ec2935e31fd9c 70 PRINTS PR00050 Cold shock protein signature 7 22 1.7E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YE3823 bf668bd46370239ba10ec2935e31fd9c 70 SMART SM00357 6 70 3.3E-33 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 YE3823 bf668bd46370239ba10ec2935e31fd9c 70 SUPERFAMILY SSF50249 3 69 5.31E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE3823 bf668bd46370239ba10ec2935e31fd9c 70 PANTHER PTHR11544 1 70 4.4E-48 T 22-04-2016 YE3823 bf668bd46370239ba10ec2935e31fd9c 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 1.4E-33 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YE3823 bf668bd46370239ba10ec2935e31fd9c 70 PIRSF PIRSF002599 1 70 6.2E-25 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 YE3823 bf668bd46370239ba10ec2935e31fd9c 70 PANTHER PTHR11544:SF54 1 70 4.4E-48 T 22-04-2016 YE3823 bf668bd46370239ba10ec2935e31fd9c 70 Gene3D G3DSA:2.40.50.140 5 68 5.5E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE3823 bf668bd46370239ba10ec2935e31fd9c 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 22-04-2016 IPR019844 Cold-shock conserved site YE1532 639cd8c98a46c825bcb3796682c3b296 760 SUPERFAMILY SSF51998 4 758 1.1E-288 T 22-04-2016 YE1532 639cd8c98a46c825bcb3796682c3b296 760 Gene3D G3DSA:3.20.70.20 5 759 0.0 T 22-04-2016 YE1532 639cd8c98a46c825bcb3796682c3b296 760 Pfam PF01228 Glycine radical 630 741 3.4E-43 T 22-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 YE1532 639cd8c98a46c825bcb3796682c3b296 760 PIRSF PIRSF000379 8 760 0.0 T 22-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 YE1532 639cd8c98a46c825bcb3796682c3b296 760 PANTHER PTHR30191 9 760 0.0 T 22-04-2016 YE1532 639cd8c98a46c825bcb3796682c3b296 760 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 11 759 0.0 T 22-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 YE1532 639cd8c98a46c825bcb3796682c3b296 760 ProSitePatterns PS00850 Glycine radical domain signature. 730 738 - T 22-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site YE1532 639cd8c98a46c825bcb3796682c3b296 760 Pfam PF02901 Pyruvate formate lyase-like 23 614 1.0E-204 T 22-04-2016 IPR004184 Pyruvate formate lyase domain GO:0003824 YE1532 639cd8c98a46c825bcb3796682c3b296 760 PANTHER PTHR30191:SF7 9 760 0.0 T 22-04-2016 YE3334 a7684d6efb035a9d734331090dc606e9 386 Pfam PF07690 Major Facilitator Superfamily 8 311 5.5E-39 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YE3334 a7684d6efb035a9d734331090dc606e9 386 PANTHER PTHR23501 1 379 2.5E-173 T 22-04-2016 YE3334 a7684d6efb035a9d734331090dc606e9 386 SUPERFAMILY SSF103473 3 379 8.11E-59 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE3334 a7684d6efb035a9d734331090dc606e9 386 PANTHER PTHR23501:SF4 1 379 2.5E-173 T 22-04-2016 YE3334 a7684d6efb035a9d734331090dc606e9 386 Gene3D G3DSA:1.20.1250.20 5 191 9.1E-32 T 22-04-2016 YE3334 a7684d6efb035a9d734331090dc606e9 386 Gene3D G3DSA:1.20.1250.20 201 379 6.9E-12 T 22-04-2016 YE3900 a9ea688fdcce9ae56c0fdb81b15346ce 129 Gene3D G3DSA:3.30.420.80 9 129 1.9E-54 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 YE3900 a9ea688fdcce9ae56c0fdb81b15346ce 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 4.7E-55 T 22-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3900 a9ea688fdcce9ae56c0fdb81b15346ce 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 22-04-2016 IPR018102 Ribosomal S11, conserved site YE3900 a9ea688fdcce9ae56c0fdb81b15346ce 129 PANTHER PTHR11759 11 129 2.1E-73 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 YE3900 a9ea688fdcce9ae56c0fdb81b15346ce 129 PIRSF PIRSF002131 1 129 1.3E-52 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 YE3900 a9ea688fdcce9ae56c0fdb81b15346ce 129 SUPERFAMILY SSF53137 15 129 7.19E-48 T 22-04-2016 YE3900 a9ea688fdcce9ae56c0fdb81b15346ce 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 7 129 32.641 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 YE3900 a9ea688fdcce9ae56c0fdb81b15346ce 129 Pfam PF00411 Ribosomal protein S11 19 128 1.9E-54 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 YE2222 83e191a4d638795c8d5a7a07ee995eb1 253 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 175 235 8.0E-16 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 YE2222 83e191a4d638795c8d5a7a07ee995eb1 253 PANTHER PTHR33446:SF1 11 253 3.1E-50 T 22-04-2016 YE2222 83e191a4d638795c8d5a7a07ee995eb1 253 PRINTS PR01374 Gram-negative bacterial tonB protein signature 103 113 1.6E-31 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 YE2222 83e191a4d638795c8d5a7a07ee995eb1 253 PRINTS PR01374 Gram-negative bacterial tonB protein signature 191 209 1.6E-31 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 YE2222 83e191a4d638795c8d5a7a07ee995eb1 253 PRINTS PR01374 Gram-negative bacterial tonB protein signature 170 191 1.6E-31 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 YE2222 83e191a4d638795c8d5a7a07ee995eb1 253 PRINTS PR01374 Gram-negative bacterial tonB protein signature 210 227 1.6E-31 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 YE2222 83e191a4d638795c8d5a7a07ee995eb1 253 SUPERFAMILY SSF74653 171 242 1.31E-18 T 22-04-2016 YE2222 83e191a4d638795c8d5a7a07ee995eb1 253 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 176 246 9.8E-18 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 YE2222 83e191a4d638795c8d5a7a07ee995eb1 253 Gene3D G3DSA:3.30.1150.10 173 237 1.2E-7 T 22-04-2016 YE2222 83e191a4d638795c8d5a7a07ee995eb1 253 Pfam PF16031 TonB N-terminal region 37 172 5.1E-24 T 22-04-2016 YE2222 83e191a4d638795c8d5a7a07ee995eb1 253 PANTHER PTHR33446 11 253 3.1E-50 T 22-04-2016 YE0427 a5ef692871cc4b20331182cb0d7a9562 209 PIRSF PIRSF005461 1 209 1.8E-81 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 YE0427 a5ef692871cc4b20331182cb0d7a9562 209 TIGRFAM TIGR00438 rrmJ: ribosomal RNA large subunit methyltransferase J 20 206 2.0E-94 T 22-04-2016 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria GO:0006364|GO:0016436 KEGG: 00564+2.1.1.16 YE0427 a5ef692871cc4b20331182cb0d7a9562 209 SUPERFAMILY SSF53335 31 207 4.97E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE0427 a5ef692871cc4b20331182cb0d7a9562 209 Pfam PF01728 FtsJ-like methyltransferase 31 206 4.7E-58 T 22-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 YE0427 a5ef692871cc4b20331182cb0d7a9562 209 Gene3D G3DSA:3.40.50.150 1 208 5.8E-74 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE0427 a5ef692871cc4b20331182cb0d7a9562 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 11 207 27.274 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 YE0427 a5ef692871cc4b20331182cb0d7a9562 209 PANTHER PTHR10920 1 208 2.5E-143 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 YE0427 a5ef692871cc4b20331182cb0d7a9562 209 PANTHER PTHR10920:SF20 1 208 2.5E-143 T 22-04-2016 YE0500 564bc3ed636024f252f927e8df5157bf 503 SUPERFAMILY SSF53187 180 496 2.35E-124 T 22-04-2016 YE0500 564bc3ed636024f252f927e8df5157bf 503 Gene3D G3DSA:3.40.220.10 1 161 2.3E-66 T 22-04-2016 YE0500 564bc3ed636024f252f927e8df5157bf 503 PANTHER PTHR11963 7 503 5.0E-269 T 22-04-2016 YE0500 564bc3ed636024f252f927e8df5157bf 503 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 2.9E-33 T 22-04-2016 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 YE0500 564bc3ed636024f252f927e8df5157bf 503 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 186 489 2.4E-117 T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 YE0500 564bc3ed636024f252f927e8df5157bf 503 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 498 41.187 T 22-04-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 YE0500 564bc3ed636024f252f927e8df5157bf 503 PRINTS PR00481 Cytosol aminopeptidase signature 346 366 3.3E-54 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 YE0500 564bc3ed636024f252f927e8df5157bf 503 PRINTS PR00481 Cytosol aminopeptidase signature 265 282 3.3E-54 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 YE0500 564bc3ed636024f252f927e8df5157bf 503 PRINTS PR00481 Cytosol aminopeptidase signature 324 345 3.3E-54 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 YE0500 564bc3ed636024f252f927e8df5157bf 503 PRINTS PR00481 Cytosol aminopeptidase signature 374 389 3.3E-54 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 YE0500 564bc3ed636024f252f927e8df5157bf 503 PRINTS PR00481 Cytosol aminopeptidase signature 287 308 3.3E-54 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 YE0500 564bc3ed636024f252f927e8df5157bf 503 Gene3D G3DSA:3.40.630.10 171 496 6.2E-137 T 22-04-2016 YE0500 564bc3ed636024f252f927e8df5157bf 503 PANTHER PTHR11963:SF13 7 503 5.0E-269 T 22-04-2016 YE0500 564bc3ed636024f252f927e8df5157bf 503 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 350 357 - T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 YE0500 564bc3ed636024f252f927e8df5157bf 503 SUPERFAMILY SSF52949 1 184 8.24E-52 T 22-04-2016 YE3200 cc9d6ae6907ebec707087791ed528357 236 SUPERFAMILY SSF64288 53 232 4.55E-44 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain YE3200 cc9d6ae6907ebec707087791ed528357 236 Pfam PF07702 UTRA domain 88 225 3.4E-28 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 YE3200 cc9d6ae6907ebec707087791ed528357 236 Gene3D G3DSA:3.40.1410.10 62 232 5.2E-47 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain YE3200 cc9d6ae6907ebec707087791ed528357 236 SUPERFAMILY SSF46785 3 69 3.18E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3200 cc9d6ae6907ebec707087791ed528357 236 SMART SM00345 6 65 1.4E-18 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YE3200 cc9d6ae6907ebec707087791ed528357 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 25 39 9.1E-10 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YE3200 cc9d6ae6907ebec707087791ed528357 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 55 9.1E-10 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YE3200 cc9d6ae6907ebec707087791ed528357 236 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 65 4.9E-19 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YE3200 cc9d6ae6907ebec707087791ed528357 236 PANTHER PTHR11751 3 68 9.8E-21 T 22-04-2016 YE3200 cc9d6ae6907ebec707087791ed528357 236 PANTHER PTHR11751 115 138 9.8E-21 T 22-04-2016 YE3200 cc9d6ae6907ebec707087791ed528357 236 SMART SM00866 86 225 7.2E-28 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 YE3200 cc9d6ae6907ebec707087791ed528357 236 Gene3D G3DSA:1.10.10.10 2 61 1.1E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3200 cc9d6ae6907ebec707087791ed528357 236 PANTHER PTHR11751:SF381 3 68 9.8E-21 T 22-04-2016 YE3200 cc9d6ae6907ebec707087791ed528357 236 PANTHER PTHR11751:SF381 115 138 9.8E-21 T 22-04-2016 YE3843 7fab443ba13e13c7659f31d10503c2d6 442 PANTHER PTHR37419:SF3 1 441 1.2E-114 T 22-04-2016 YE3843 7fab443ba13e13c7659f31d10503c2d6 442 Pfam PF07805 HipA-like N-terminal domain 156 242 1.2E-18 T 22-04-2016 IPR012894 HipA, N-terminal subdomain 2 YE3843 7fab443ba13e13c7659f31d10503c2d6 442 Pfam PF07804 HipA-like C-terminal domain 253 408 3.1E-31 T 22-04-2016 IPR012893 HipA-like, C-terminal YE3843 7fab443ba13e13c7659f31d10503c2d6 442 Pfam PF13657 HipA N-terminal domain 8 108 6.0E-22 T 22-04-2016 IPR017508 HipA, N-terminal subdomain 1 YE3843 7fab443ba13e13c7659f31d10503c2d6 442 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 8 108 2.6E-29 T 22-04-2016 IPR017508 HipA, N-terminal subdomain 1 YE3843 7fab443ba13e13c7659f31d10503c2d6 442 PANTHER PTHR37419 1 441 1.2E-114 T 22-04-2016 YE2768 ecf1c1c56efd41e1c1ce6b7721854197 355 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 2 355 57.254 T 22-04-2016 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15|UniPathway: UPA00031|UniPathway: UPA00031 YE2768 ecf1c1c56efd41e1c1ce6b7721854197 355 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 196 337 2.5E-64 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 YE2768 ecf1c1c56efd41e1c1ce6b7721854197 355 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 5 144 1.9E-43 T 22-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 YE2768 ecf1c1c56efd41e1c1ce6b7721854197 355 PANTHER PTHR23133:SF2 10 97 3.5E-183 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 YE2768 ecf1c1c56efd41e1c1ce6b7721854197 355 PANTHER PTHR23133:SF2 163 355 3.5E-183 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 YE2768 ecf1c1c56efd41e1c1ce6b7721854197 355 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 167 355 36.409 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 YE2768 ecf1c1c56efd41e1c1ce6b7721854197 355 SUPERFAMILY SSF54211 167 251 1.77E-30 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YE2768 ecf1c1c56efd41e1c1ce6b7721854197 355 Gene3D G3DSA:3.40.50.1000 1 160 7.4E-39 T 22-04-2016 IPR023214 HAD-like domain YE2768 ecf1c1c56efd41e1c1ce6b7721854197 355 SUPERFAMILY SSF54211 252 342 2.28E-31 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YE2768 ecf1c1c56efd41e1c1ce6b7721854197 355 SUPERFAMILY SSF56784 1 156 1.76E-36 T 22-04-2016 IPR023214 HAD-like domain YE2768 ecf1c1c56efd41e1c1ce6b7721854197 355 Gene3D G3DSA:3.30.230.40 258 355 2.6E-31 T 22-04-2016 YE2768 ecf1c1c56efd41e1c1ce6b7721854197 355 PANTHER PTHR23133 10 97 3.5E-183 T 22-04-2016 YE2768 ecf1c1c56efd41e1c1ce6b7721854197 355 PANTHER PTHR23133 163 355 3.5E-183 T 22-04-2016 YE2768 ecf1c1c56efd41e1c1ce6b7721854197 355 Gene3D G3DSA:3.30.230.40 167 253 2.1E-37 T 22-04-2016 YE2768 ecf1c1c56efd41e1c1ce6b7721854197 355 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 319 331 - T 22-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 YE2768 ecf1c1c56efd41e1c1ce6b7721854197 355 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 4 148 1.6E-23 T 22-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA YE2768 ecf1c1c56efd41e1c1ce6b7721854197 355 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 3 162 1.3E-76 T 22-04-2016 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15|UniPathway: UPA00031|UniPathway: UPA00031 YE2768 ecf1c1c56efd41e1c1ce6b7721854197 355 Pfam PF13242 HAD-hyrolase-like 103 146 1.5E-5 T 22-04-2016 YE2768 ecf1c1c56efd41e1c1ce6b7721854197 355 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 226 239 - T 22-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 YE0594 f274b21d21a11ee140f03e73259f7c3a 156 PIRSF PIRSF003174 1 156 7.2E-68 T 22-04-2016 IPR010292 Uncharacterised protein family CreA YE0594 f274b21d21a11ee140f03e73259f7c3a 156 PANTHER PTHR37952:SF2 1 156 1.8E-89 T 22-04-2016 YE0594 f274b21d21a11ee140f03e73259f7c3a 156 Pfam PF05981 CreA protein 24 155 1.9E-58 T 22-04-2016 IPR010292 Uncharacterised protein family CreA YE0594 f274b21d21a11ee140f03e73259f7c3a 156 PANTHER PTHR37952 1 156 1.8E-89 T 22-04-2016 YE4160 955c211da1a9ea3d7ba7aee7456fd878 688 Gene3D G3DSA:3.20.20.80 185 654 5.3E-87 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 YE4160 955c211da1a9ea3d7ba7aee7456fd878 688 PANTHER PTHR10357 436 682 7.2E-119 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 YE4160 955c211da1a9ea3d7ba7aee7456fd878 688 PANTHER PTHR10357 225 322 7.2E-119 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 YE4160 955c211da1a9ea3d7ba7aee7456fd878 688 PANTHER PTHR10357 161 209 7.2E-119 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 YE4160 955c211da1a9ea3d7ba7aee7456fd878 688 PANTHER PTHR10357 351 412 7.2E-119 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 YE4160 955c211da1a9ea3d7ba7aee7456fd878 688 Pfam PF00128 Alpha amylase, catalytic domain 228 606 7.1E-39 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 YE4160 955c211da1a9ea3d7ba7aee7456fd878 688 PANTHER PTHR10357:SF11 436 682 7.2E-119 T 22-04-2016 YE4160 955c211da1a9ea3d7ba7aee7456fd878 688 PANTHER PTHR10357:SF11 225 322 7.2E-119 T 22-04-2016 YE4160 955c211da1a9ea3d7ba7aee7456fd878 688 PANTHER PTHR10357:SF11 161 209 7.2E-119 T 22-04-2016 YE4160 955c211da1a9ea3d7ba7aee7456fd878 688 PANTHER PTHR10357:SF11 351 412 7.2E-119 T 22-04-2016 YE4160 955c211da1a9ea3d7ba7aee7456fd878 688 Pfam PF17143 Domain of unknown function (DUF5116) 15 96 9.3E-7 T 22-04-2016 IPR033409 Domain of unknown function DUF5116 YE4160 955c211da1a9ea3d7ba7aee7456fd878 688 PIRSF PIRSF036917 1 686 0.0 T 22-04-2016 IPR014635 Alpha-amylase, MalS type GO:0004556|GO:0005509|GO:0030980|GO:0042597|GO:0051692 KEGG: 00500+3.2.1.1 YE4160 955c211da1a9ea3d7ba7aee7456fd878 688 SMART SM00642 195 647 8.6E-79 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 YE4160 955c211da1a9ea3d7ba7aee7456fd878 688 SUPERFAMILY SSF51445 376 653 3.19E-73 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YE4160 955c211da1a9ea3d7ba7aee7456fd878 688 SUPERFAMILY SSF51445 182 320 3.19E-73 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YE0284 c0b522d1ce96a7b070bcabdcc3b43272 122 Gene3D G3DSA:3.30.1390.10 52 122 1.6E-34 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like YE0284 c0b522d1ce96a7b070bcabdcc3b43272 122 Gene3D G3DSA:1.20.5.710 4 51 3.6E-20 T 22-04-2016 YE0284 c0b522d1ce96a7b070bcabdcc3b43272 122 SUPERFAMILY SSF48300 4 58 4.32E-15 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0284 c0b522d1ce96a7b070bcabdcc3b43272 122 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 49 5.9E-15 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0284 c0b522d1ce96a7b070bcabdcc3b43272 122 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 57 122 5.0E-27 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 YE0284 c0b522d1ce96a7b070bcabdcc3b43272 122 SUPERFAMILY SSF54736 51 122 1.52E-25 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like YE0284 c0b522d1ce96a7b070bcabdcc3b43272 122 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 3 122 25.191 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0284 c0b522d1ce96a7b070bcabdcc3b43272 122 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 122 8.6E-48 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0284 c0b522d1ce96a7b070bcabdcc3b43272 122 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 56 122 2.0E-31 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 YE3585 d045d758a9cbbea332a32557c7d2c258 319 PANTHER PTHR30472 1 319 3.6E-178 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 YE3585 d045d758a9cbbea332a32557c7d2c258 319 Gene3D G3DSA:1.10.3470.10 4 315 1.9E-71 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YE3585 d045d758a9cbbea332a32557c7d2c258 319 SUPERFAMILY SSF81345 5 313 8.24E-68 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YE3585 d045d758a9cbbea332a32557c7d2c258 319 Pfam PF01032 FecCD transport family 13 313 7.2E-65 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 YE3585 d045d758a9cbbea332a32557c7d2c258 319 PANTHER PTHR30472:SF27 1 319 3.6E-178 T 22-04-2016 YE3572 fadca5d726c88dfdd1cfe3a84f0fef82 399 SUPERFAMILY SSF53067 14 154 1.55E-30 T 22-04-2016 YE3572 fadca5d726c88dfdd1cfe3a84f0fef82 399 PIRSF PIRSF015761 11 394 7.0E-23 T 22-04-2016 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 YE3572 fadca5d726c88dfdd1cfe3a84f0fef82 399 SUPERFAMILY SSF53067 157 238 8.8E-18 T 22-04-2016 YE3572 fadca5d726c88dfdd1cfe3a84f0fef82 399 Pfam PF05134 Type II secretion system (T2SS), protein L 16 240 4.3E-42 T 22-04-2016 IPR024230 GspL, cytoplasmic actin-ATPase-like domain YE0840 3e06f3243d8173157ef5611ba5f31bb9 426 Pfam PF01595 Domain of unknown function DUF21 12 185 1.6E-51 T 22-04-2016 IPR002550 Domain of unknown function DUF21 YE0840 3e06f3243d8173157ef5611ba5f31bb9 426 SUPERFAMILY SSF54631 193 330 9.98E-23 T 22-04-2016 YE0840 3e06f3243d8173157ef5611ba5f31bb9 426 PANTHER PTHR22777 1 424 4.4E-158 T 22-04-2016 YE0840 3e06f3243d8173157ef5611ba5f31bb9 426 SMART SM01091 343 420 5.8E-23 T 22-04-2016 IPR005170 Transporter-associated domain YE0840 3e06f3243d8173157ef5611ba5f31bb9 426 Gene3D G3DSA:3.30.465.10 320 418 5.9E-25 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 YE0840 3e06f3243d8173157ef5611ba5f31bb9 426 SUPERFAMILY SSF56176 341 422 5.45E-19 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 YE0840 3e06f3243d8173157ef5611ba5f31bb9 426 PANTHER PTHR22777:SF3 1 424 4.4E-158 T 22-04-2016 YE0840 3e06f3243d8173157ef5611ba5f31bb9 426 Pfam PF03471 Transporter associated domain 345 418 7.5E-17 T 22-04-2016 IPR005170 Transporter-associated domain YE0840 3e06f3243d8173157ef5611ba5f31bb9 426 Gene3D G3DSA:3.10.580.10 192 319 2.3E-11 T 22-04-2016 YE3441 4a448be2d924f7581fa577915b172713 108 PANTHER PTHR38778 2 108 1.5E-56 T 22-04-2016 YE3441 4a448be2d924f7581fa577915b172713 108 Pfam PF04320 Protein with unknown function (DUF469) 7 107 9.7E-44 T 22-04-2016 IPR007416 Protein of unknown function DUF469 YE3441 4a448be2d924f7581fa577915b172713 108 PANTHER PTHR38778:SF1 2 108 1.5E-56 T 22-04-2016 YE2673 9c20d3a404a97ddee16ca55566505f68 324 Gene3D G3DSA:3.40.50.2300 190 321 1.7E-24 T 22-04-2016 YE2673 9c20d3a404a97ddee16ca55566505f68 324 SMART SM00260 17 161 5.6E-20 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 YE2673 9c20d3a404a97ddee16ca55566505f68 324 PANTHER PTHR22617:SF37 1 177 9.1E-60 T 22-04-2016 YE2673 9c20d3a404a97ddee16ca55566505f68 324 Pfam PF00072 Response regulator receiver domain 190 312 2.1E-13 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE2673 9c20d3a404a97ddee16ca55566505f68 324 SUPERFAMILY SSF52172 189 320 3.84E-21 T 22-04-2016 IPR011006 CheY-like superfamily YE2673 9c20d3a404a97ddee16ca55566505f68 324 Pfam PF01584 CheW-like domain 21 163 2.3E-31 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 YE2673 9c20d3a404a97ddee16ca55566505f68 324 SMART SM00448 187 312 1.4E-11 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE2673 9c20d3a404a97ddee16ca55566505f68 324 SUPERFAMILY SSF50341 17 164 2.35E-25 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 YE2673 9c20d3a404a97ddee16ca55566505f68 324 PIRSF PIRSF002867 1 320 6.7E-100 T 22-04-2016 IPR024181 Chemotaxis response regulator CheV YE2673 9c20d3a404a97ddee16ca55566505f68 324 PANTHER PTHR22617 1 177 9.1E-60 T 22-04-2016 YE3563 e299e90d729b064447409294c9ffdd57 161 SUPERFAMILY SSF46894 27 111 5.1E-7 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YE3563 e299e90d729b064447409294c9ffdd57 161 Gene3D G3DSA:1.10.10.10 26 113 2.3E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1063 11bca8c778b5bd9ae64fefd0eb82c974 66 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 4 66 5.1E-32 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 YE1063 11bca8c778b5bd9ae64fefd0eb82c974 66 PIRSF PIRSF039003 3 66 7.0E-32 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 YE1063 11bca8c778b5bd9ae64fefd0eb82c974 66 Pfam PF04384 Iron-sulphur cluster assembly 3 66 4.3E-31 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 YE1063 11bca8c778b5bd9ae64fefd0eb82c974 66 PANTHER PTHR37532 1 66 4.4E-35 T 22-04-2016 YE1063 11bca8c778b5bd9ae64fefd0eb82c974 66 SUPERFAMILY SSF140319 3 64 2.09E-26 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 YE1063 11bca8c778b5bd9ae64fefd0eb82c974 66 Gene3D G3DSA:1.10.10.600 1 66 9.1E-34 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 YE1063 11bca8c778b5bd9ae64fefd0eb82c974 66 PANTHER PTHR37532:SF1 1 66 4.4E-35 T 22-04-2016 YE0604 cc6efc365287d43bddbe7176a8f58c14 317 TIGRFAM TIGR00874 talAB: transaldolase 4 316 2.0E-163 T 22-04-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 YE0604 cc6efc365287d43bddbe7176a8f58c14 317 Gene3D G3DSA:3.20.20.70 3 315 6.9E-133 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YE0604 cc6efc365287d43bddbe7176a8f58c14 317 Hamap MF_00492 Transaldolase [tal]. 2 317 51.802 T 22-04-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 YE0604 cc6efc365287d43bddbe7176a8f58c14 317 PANTHER PTHR10683:SF18 1 317 6.0E-179 T 22-04-2016 YE0604 cc6efc365287d43bddbe7176a8f58c14 317 PANTHER PTHR10683 1 317 6.0E-179 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 YE0604 cc6efc365287d43bddbe7176a8f58c14 317 SUPERFAMILY SSF51569 1 316 7.01E-116 T 22-04-2016 YE0604 cc6efc365287d43bddbe7176a8f58c14 317 Pfam PF00923 Transaldolase 14 313 4.6E-101 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 YE0604 cc6efc365287d43bddbe7176a8f58c14 317 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 YE0604 cc6efc365287d43bddbe7176a8f58c14 317 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 YE0354 25d813a68ed632403b31c3eecaf3471b 550 Hamap MF_00600 60 kDa chaperonin [groL]. 2 549 41.513 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 YE0354 25d813a68ed632403b31c3eecaf3471b 550 SUPERFAMILY SSF52029 185 376 8.02E-82 T 22-04-2016 IPR027409 GroEL-like apical domain YE0354 25d813a68ed632403b31c3eecaf3471b 550 Gene3D G3DSA:1.10.560.10 369 520 1.7E-37 T 22-04-2016 IPR027413 GroEL-like equatorial domain YE0354 25d813a68ed632403b31c3eecaf3471b 550 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 528 4.1E-253 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 YE0354 25d813a68ed632403b31c3eecaf3471b 550 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 22-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 YE0354 25d813a68ed632403b31c3eecaf3471b 550 PANTHER PTHR11353 2 550 4.2E-255 T 22-04-2016 YE0354 25d813a68ed632403b31c3eecaf3471b 550 Gene3D G3DSA:1.10.560.10 3 188 4.4E-48 T 22-04-2016 IPR027413 GroEL-like equatorial domain YE0354 25d813a68ed632403b31c3eecaf3471b 550 SUPERFAMILY SSF54849 137 203 5.04E-24 T 22-04-2016 YE0354 25d813a68ed632403b31c3eecaf3471b 550 Gene3D G3DSA:3.50.7.10 189 368 6.9E-98 T 22-04-2016 IPR027409 GroEL-like apical domain YE0354 25d813a68ed632403b31c3eecaf3471b 550 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 525 2.4E-92 T 22-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 YE0354 25d813a68ed632403b31c3eecaf3471b 550 PRINTS PR00298 60kDa chaperonin signature 268 291 2.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 YE0354 25d813a68ed632403b31c3eecaf3471b 550 PRINTS PR00298 60kDa chaperonin signature 350 375 2.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 YE0354 25d813a68ed632403b31c3eecaf3471b 550 PRINTS PR00298 60kDa chaperonin signature 398 419 2.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 YE0354 25d813a68ed632403b31c3eecaf3471b 550 PRINTS PR00298 60kDa chaperonin signature 27 53 2.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 YE0354 25d813a68ed632403b31c3eecaf3471b 550 PRINTS PR00298 60kDa chaperonin signature 83 110 2.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 YE0354 25d813a68ed632403b31c3eecaf3471b 550 SUPERFAMILY SSF48592 406 523 9.16E-76 T 22-04-2016 YE0354 25d813a68ed632403b31c3eecaf3471b 550 SUPERFAMILY SSF48592 7 134 9.16E-76 T 22-04-2016 YE1124 dc0ef47aa798e02ec78e04fd70b14787 181 PANTHER PTHR13256 1 178 1.2E-78 T 22-04-2016 YE1124 dc0ef47aa798e02ec78e04fd70b14787 181 SUPERFAMILY SSF55729 3 164 1.1E-40 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE1124 dc0ef47aa798e02ec78e04fd70b14787 181 Pfam PF13302 Acetyltransferase (GNAT) domain 7 141 3.5E-22 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YE1124 dc0ef47aa798e02ec78e04fd70b14787 181 Gene3D G3DSA:3.40.630.30 3 165 3.6E-41 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE1124 dc0ef47aa798e02ec78e04fd70b14787 181 PANTHER PTHR13256:SF21 1 178 1.2E-78 T 22-04-2016 YE1419 3241099a5f5d853756048451bec858bd 597 Gene3D G3DSA:3.40.720.10 260 531 2.6E-30 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 YE1419 3241099a5f5d853756048451bec858bd 597 Pfam PF11893 Domain of unknown function (DUF3413) 6 251 2.0E-107 T 22-04-2016 IPR024588 Inner membrane protein YejM, N-terminal YE1419 3241099a5f5d853756048451bec858bd 597 PANTHER PTHR10342 231 578 2.7E-139 T 22-04-2016 YE1419 3241099a5f5d853756048451bec858bd 597 PANTHER PTHR10342:SF215 231 578 2.7E-139 T 22-04-2016 YE1419 3241099a5f5d853756048451bec858bd 597 Pfam PF00884 Sulfatase 260 511 4.3E-22 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 YE1419 3241099a5f5d853756048451bec858bd 597 PIRSF PIRSF004950 6 597 1.3E-236 T 22-04-2016 IPR012159 Inner membrane protein YejM YE1419 3241099a5f5d853756048451bec858bd 597 SUPERFAMILY SSF53649 257 581 3.05E-48 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 YE1502 d75b0f78d6c1a7b8ddeb4132075b616d 191 Pfam PF12883 Protein of unknown function (DUF3828) 41 174 9.1E-14 T 22-04-2016 IPR024289 Domain of unknown function DUF3828 YE1390 eff95f39ddc2228b8fff8d148eee580c 168 PANTHER PTHR35890:SF4 9 168 5.4E-93 T 22-04-2016 YE1390 eff95f39ddc2228b8fff8d148eee580c 168 Gene3D G3DSA:2.60.40.550 30 110 1.2E-37 T 22-04-2016 IPR023189 Proteinase inhibitor I11, ecotin domain YE1390 eff95f39ddc2228b8fff8d148eee580c 168 Hamap MF_00706 Ecotin [eco]. 4 168 40.097 T 22-04-2016 IPR023084 Proteinase inhibitor I11, ecotin, gammaproteobacteria YE1390 eff95f39ddc2228b8fff8d148eee580c 168 Gene3D G3DSA:4.10.1230.10 111 167 2.3E-27 T 22-04-2016 IPR027438 Ecotin, C-terminal YE1390 eff95f39ddc2228b8fff8d148eee580c 168 SUPERFAMILY SSF49772 32 166 1.44E-53 T 22-04-2016 IPR023189 Proteinase inhibitor I11, ecotin domain YE1390 eff95f39ddc2228b8fff8d148eee580c 168 PIRSF PIRSF006865 1 168 1.7E-65 T 22-04-2016 IPR005658 Proteinase inhibitor I11, ecotin YE1390 eff95f39ddc2228b8fff8d148eee580c 168 Pfam PF03974 Ecotin 36 158 6.3E-50 T 22-04-2016 IPR023189 Proteinase inhibitor I11, ecotin domain YE1390 eff95f39ddc2228b8fff8d148eee580c 168 PANTHER PTHR35890 9 168 5.4E-93 T 22-04-2016 YE2670 818a0d9d52c98d6fffb7eded967bbd81 493 PANTHER PTHR11751:SF10 114 493 5.2E-102 T 22-04-2016 YE2670 818a0d9d52c98d6fffb7eded967bbd81 493 Gene3D G3DSA:3.40.640.10 171 383 1.4E-53 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YE2670 818a0d9d52c98d6fffb7eded967bbd81 493 Gene3D G3DSA:1.10.10.10 17 86 6.2E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2670 818a0d9d52c98d6fffb7eded967bbd81 493 PANTHER PTHR11751 114 493 5.2E-102 T 22-04-2016 YE2670 818a0d9d52c98d6fffb7eded967bbd81 493 SMART SM00345 24 83 8.1E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YE2670 818a0d9d52c98d6fffb7eded967bbd81 493 Pfam PF00155 Aminotransferase class I and II 176 427 8.6E-18 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YE2670 818a0d9d52c98d6fffb7eded967bbd81 493 SUPERFAMILY SSF46785 22 92 6.89E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2670 818a0d9d52c98d6fffb7eded967bbd81 493 SUPERFAMILY SSF53383 132 492 4.08E-79 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YE2670 818a0d9d52c98d6fffb7eded967bbd81 493 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 83 7.1E-11 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YE1277 2392850247ab53019216c05ffc312b78 699 SUPERFAMILY SSF48179 465 569 7.4E-29 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 YE1277 2392850247ab53019216c05ffc312b78 699 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 596 678 1.7E-5 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 YE1277 2392850247ab53019216c05ffc312b78 699 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 465 558 1.2E-24 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 YE1277 2392850247ab53019216c05ffc312b78 699 SUPERFAMILY SSF48179 595 684 1.62E-25 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 YE1277 2392850247ab53019216c05ffc312b78 699 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 1 684 0.0 T 22-04-2016 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 YE1277 2392850247ab53019216c05ffc312b78 699 Gene3D G3DSA:3.90.226.10 2 176 1.0E-59 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YE1277 2392850247ab53019216c05ffc312b78 699 Gene3D G3DSA:3.40.50.720 277 466 5.5E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain YE1277 2392850247ab53019216c05ffc312b78 699 Gene3D G3DSA:1.10.1040.10 602 683 4.5E-23 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 YE1277 2392850247ab53019216c05ffc312b78 699 SUPERFAMILY SSF51735 281 462 9.55E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain YE1277 2392850247ab53019216c05ffc312b78 699 PANTHER PTHR23309 1 695 0.0 T 22-04-2016 YE1277 2392850247ab53019216c05ffc312b78 699 SUPERFAMILY SSF52096 1 271 2.18E-60 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YE1277 2392850247ab53019216c05ffc312b78 699 Gene3D G3DSA:1.10.1040.10 467 558 6.6E-27 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 YE1277 2392850247ab53019216c05ffc312b78 699 Pfam PF00378 Enoyl-CoA hydratase/isomerase 1 177 3.6E-40 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 YE1277 2392850247ab53019216c05ffc312b78 699 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 462 487 - T 22-04-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 YE1277 2392850247ab53019216c05ffc312b78 699 PANTHER PTHR23309:SF6 1 695 0.0 T 22-04-2016 YE1277 2392850247ab53019216c05ffc312b78 699 Hamap MF_01617 Fatty acid oxidation complex subunit alpha [fadJ]. 1 684 51.537 T 22-04-2016 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 YE1277 2392850247ab53019216c05ffc312b78 699 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 284 462 6.1E-58 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 YE2794 43a5f79df1cea4a31d6878ba04f0577e 565 SUPERFAMILY SSF53223 6 270 4.32E-111 T 22-04-2016 YE2794 43a5f79df1cea4a31d6878ba04f0577e 565 PRINTS PR00072 Malic enzyme signature 267 283 1.2E-71 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 YE2794 43a5f79df1cea4a31d6878ba04f0577e 565 PRINTS PR00072 Malic enzyme signature 242 260 1.2E-71 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 YE2794 43a5f79df1cea4a31d6878ba04f0577e 565 PRINTS PR00072 Malic enzyme signature 183 205 1.2E-71 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 YE2794 43a5f79df1cea4a31d6878ba04f0577e 565 PRINTS PR00072 Malic enzyme signature 298 314 1.2E-71 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 YE2794 43a5f79df1cea4a31d6878ba04f0577e 565 PRINTS PR00072 Malic enzyme signature 408 424 1.2E-71 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 YE2794 43a5f79df1cea4a31d6878ba04f0577e 565 PRINTS PR00072 Malic enzyme signature 147 176 1.2E-71 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 YE2794 43a5f79df1cea4a31d6878ba04f0577e 565 PRINTS PR00072 Malic enzyme signature 87 111 1.2E-71 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 YE2794 43a5f79df1cea4a31d6878ba04f0577e 565 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 4 565 71.455 T 22-04-2016 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38 YE2794 43a5f79df1cea4a31d6878ba04f0577e 565 Pfam PF03949 Malic enzyme, NAD binding domain 271 530 6.5E-103 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 YE2794 43a5f79df1cea4a31d6878ba04f0577e 565 ProSitePatterns PS00331 Malic enzymes signature. 267 283 - T 22-04-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 YE2794 43a5f79df1cea4a31d6878ba04f0577e 565 PANTHER PTHR23406:SF25 1 565 0.0 T 22-04-2016 YE2794 43a5f79df1cea4a31d6878ba04f0577e 565 SMART SM00919 271 531 1.3E-132 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 YE2794 43a5f79df1cea4a31d6878ba04f0577e 565 Pfam PF00390 Malic enzyme, N-terminal domain 81 261 3.3E-79 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 YE2794 43a5f79df1cea4a31d6878ba04f0577e 565 SUPERFAMILY SSF51735 271 562 2.06E-94 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2794 43a5f79df1cea4a31d6878ba04f0577e 565 SMART SM01274 81 261 1.4E-109 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 YE2794 43a5f79df1cea4a31d6878ba04f0577e 565 Gene3D G3DSA:3.40.50.10380 17 268 4.0E-117 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 YE2794 43a5f79df1cea4a31d6878ba04f0577e 565 PIRSF PIRSF000106 3 563 9.1E-229 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 YE2794 43a5f79df1cea4a31d6878ba04f0577e 565 PANTHER PTHR23406 1 565 0.0 T 22-04-2016 YE2794 43a5f79df1cea4a31d6878ba04f0577e 565 Gene3D G3DSA:3.40.50.720 269 562 1.6E-109 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3915 8b2fd8a4265bcf8859aa63a35e3fcda4 63 Gene3D G3DSA:1.10.287.310 1 60 2.2E-27 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3915 8b2fd8a4265bcf8859aa63a35e3fcda4 63 SUPERFAMILY SSF46561 1 61 1.03E-21 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3915 8b2fd8a4265bcf8859aa63a35e3fcda4 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 3.4E-22 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3915 8b2fd8a4265bcf8859aa63a35e3fcda4 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.366 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3915 8b2fd8a4265bcf8859aa63a35e3fcda4 63 PANTHER PTHR10916 1 63 8.5E-29 T 22-04-2016 YE3915 8b2fd8a4265bcf8859aa63a35e3fcda4 63 Pfam PF00831 Ribosomal L29 protein 4 60 1.2E-22 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE1185 7120d20dd446ff4e2b7284d864950a2b 137 Pfam PF04076 Bacterial OB fold (BOF) protein 30 135 2.5E-36 T 22-04-2016 IPR005220 Bacterial OB-fold YE1185 7120d20dd446ff4e2b7284d864950a2b 137 PANTHER PTHR36571 2 137 5.9E-70 T 22-04-2016 YE1185 7120d20dd446ff4e2b7284d864950a2b 137 SUPERFAMILY SSF101756 40 135 1.31E-35 T 22-04-2016 IPR005220 Bacterial OB-fold YE1185 7120d20dd446ff4e2b7284d864950a2b 137 Gene3D G3DSA:2.40.50.200 38 137 2.6E-42 T 22-04-2016 IPR005220 Bacterial OB-fold YE1185 7120d20dd446ff4e2b7284d864950a2b 137 TIGRFAM TIGR00156 TIGR00156: TIGR00156 family protein 2 136 1.1E-43 T 22-04-2016 IPR016052 Bacteriophage 933W, L0136 YE1185 7120d20dd446ff4e2b7284d864950a2b 137 PANTHER PTHR36571:SF1 2 137 5.9E-70 T 22-04-2016 YE3867 ef16e85495761141e071940a5d0c30c2 525 SUPERFAMILY SSF160964 23 271 6.8E-83 T 22-04-2016 YE3867 ef16e85495761141e071940a5d0c30c2 525 PANTHER PTHR30193:SF22 45 113 3.6E-150 T 22-04-2016 YE3867 ef16e85495761141e071940a5d0c30c2 525 PANTHER PTHR30193:SF22 270 523 3.6E-150 T 22-04-2016 YE3867 ef16e85495761141e071940a5d0c30c2 525 Gene3D G3DSA:1.20.58.370 11 103 9.9E-39 T 22-04-2016 YE3867 ef16e85495761141e071940a5d0c30c2 525 Gene3D G3DSA:2.40.430.10 126 205 1.3E-31 T 22-04-2016 YE3867 ef16e85495761141e071940a5d0c30c2 525 Pfam PF14785 Maltose transport system permease protein MalF P2 domain 108 271 2.0E-62 T 22-04-2016 IPR029345 Maltose transport system permease protein MalF, P2 domain YE3867 ef16e85495761141e071940a5d0c30c2 525 SUPERFAMILY SSF161098 272 514 1.44E-58 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE3867 ef16e85495761141e071940a5d0c30c2 525 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 310 512 1.7E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE3867 ef16e85495761141e071940a5d0c30c2 525 Gene3D G3DSA:3.10.650.10 206 280 6.0E-37 T 22-04-2016 YE3867 ef16e85495761141e071940a5d0c30c2 525 PANTHER PTHR30193 45 113 3.6E-150 T 22-04-2016 YE3867 ef16e85495761141e071940a5d0c30c2 525 PANTHER PTHR30193 270 523 3.6E-150 T 22-04-2016 YE3867 ef16e85495761141e071940a5d0c30c2 525 Gene3D G3DSA:1.10.3720.10 286 521 5.7E-60 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE2948 4305e4c437b1e6c6c9e44b0ce5d3bb5b 129 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 9 33 - T 22-04-2016 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 UniPathway: UPA00223 YE2948 4305e4c437b1e6c6c9e44b0ce5d3bb5b 129 SUPERFAMILY SSF81343 3 129 5.45E-34 T 22-04-2016 YE2948 4305e4c437b1e6c6c9e44b0ce5d3bb5b 129 PANTHER PTHR10978:SF4 3 129 7.5E-78 T 22-04-2016 YE2948 4305e4c437b1e6c6c9e44b0ce5d3bb5b 129 PANTHER PTHR10978 3 129 7.5E-78 T 22-04-2016 YE2948 4305e4c437b1e6c6c9e44b0ce5d3bb5b 129 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 6 123 2.7E-29 T 22-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 YE2948 4305e4c437b1e6c6c9e44b0ce5d3bb5b 129 PIRSF PIRSF000178 2 129 1.7E-32 T 22-04-2016 YE2948 4305e4c437b1e6c6c9e44b0ce5d3bb5b 129 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 84 97 - T 22-04-2016 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 UniPathway: UPA00223 YE2948 4305e4c437b1e6c6c9e44b0ce5d3bb5b 129 Gene3D G3DSA:1.20.1300.10 3 129 3.6E-42 T 22-04-2016 YE2948 4305e4c437b1e6c6c9e44b0ce5d3bb5b 129 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 7 126 1.3E-40 T 22-04-2016 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 UniPathway: UPA00223 YE1460 55c1d2146b44f5e53cbf611f3cfdd327 262 Pfam PF00005 ABC transporter 28 165 1.2E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE1460 55c1d2146b44f5e53cbf611f3cfdd327 262 Gene3D G3DSA:3.40.50.300 6 243 1.3E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1460 55c1d2146b44f5e53cbf611f3cfdd327 262 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE1460 55c1d2146b44f5e53cbf611f3cfdd327 262 SMART SM00382 30 215 1.5E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain YE1460 55c1d2146b44f5e53cbf611f3cfdd327 262 PANTHER PTHR24220 6 243 6.1E-63 T 22-04-2016 YE1460 55c1d2146b44f5e53cbf611f3cfdd327 262 SUPERFAMILY SSF52540 5 229 1.47E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2002 5413afa7aa55125383fd41f4f98397ca 550 PANTHER PTHR10196 1 550 0.0 T 22-04-2016 YE2002 5413afa7aa55125383fd41f4f98397ca 550 SUPERFAMILY SSF53067 279 538 1.19E-46 T 22-04-2016 YE2002 5413afa7aa55125383fd41f4f98397ca 550 Gene3D G3DSA:3.30.420.40 279 537 5.7E-47 T 22-04-2016 YE2002 5413afa7aa55125383fd41f4f98397ca 550 PIRSF PIRSF000538 1 549 2.3E-40 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 YE2002 5413afa7aa55125383fd41f4f98397ca 550 PANTHER PTHR10196:SF62 1 550 0.0 T 22-04-2016 YE2002 5413afa7aa55125383fd41f4f98397ca 550 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 285 495 1.4E-37 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 YE2002 5413afa7aa55125383fd41f4f98397ca 550 TIGRFAM TIGR01234 L-ribulokinase: ribulokinase 1 542 7.1E-226 T 22-04-2016 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16|UniPathway: UPA00145 YE2002 5413afa7aa55125383fd41f4f98397ca 550 SUPERFAMILY SSF53067 1 278 3.89E-22 T 22-04-2016 YE2002 5413afa7aa55125383fd41f4f98397ca 550 Hamap MF_00520 Ribulokinase [araB]. 1 550 50.075 T 22-04-2016 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16|UniPathway: UPA00145 YE2002 5413afa7aa55125383fd41f4f98397ca 550 Gene3D G3DSA:3.30.420.40 1 276 2.3E-29 T 22-04-2016 YE1639 34b268e6c839a658870ef038a7926e89 341 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 16 337 3.0E-123 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like YE1639 34b268e6c839a658870ef038a7926e89 341 PANTHER PTHR30518:SF2 8 341 5.0E-101 T 22-04-2016 YE1639 34b268e6c839a658870ef038a7926e89 341 Pfam PF02618 YceG-like family 44 329 1.9E-83 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like YE1639 34b268e6c839a658870ef038a7926e89 341 PANTHER PTHR30518 8 341 5.0E-101 T 22-04-2016 YE1639 34b268e6c839a658870ef038a7926e89 341 Gene3D G3DSA:3.30.160.60 72 110 8.4E-25 T 22-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 YE1639 34b268e6c839a658870ef038a7926e89 341 Gene3D G3DSA:3.30.160.60 304 340 5.4E-19 T 22-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 YE0206 f031a6ca1ca7f905a49647fed0c5c9ba 206 PIRSF PIRSF006324 1 205 1.4E-54 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 YE0206 f031a6ca1ca7f905a49647fed0c5c9ba 206 PANTHER PTHR30086:SF14 1 205 8.7E-118 T 22-04-2016 YE0206 f031a6ca1ca7f905a49647fed0c5c9ba 206 PANTHER PTHR30086 1 205 8.7E-118 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 YE0206 f031a6ca1ca7f905a49647fed0c5c9ba 206 Pfam PF01810 LysE type translocator 14 202 2.7E-45 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 YE2617 49b85b1f095be877c440ade07a64d8a2 2035 Gene3D G3DSA:3.40.50.980 716 872 5.2E-42 T 22-04-2016 YE2617 49b85b1f095be877c440ade07a64d8a2 2035 SUPERFAMILY SSF47336 21 124 3.89E-9 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YE2617 49b85b1f095be877c440ade07a64d8a2 2035 SUPERFAMILY SSF56801 549 1018 1.22E-135 T 22-04-2016 YE2617 49b85b1f095be877c440ade07a64d8a2 2035 SUPERFAMILY SSF56801 1344 1422 1.22E-135 T 22-04-2016 YE2617 49b85b1f095be877c440ade07a64d8a2 2035 SUPERFAMILY SSF52777 1489 1680 3.0E-20 T 22-04-2016 YE2617 49b85b1f095be877c440ade07a64d8a2 2035 SUPERFAMILY SSF47336 1405 1475 5.61E-15 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YE2617 49b85b1f095be877c440ade07a64d8a2 2035 SMART SM00823 Phosphopantetheine attachment site 1410 1478 0.17 T 22-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 YE2617 49b85b1f095be877c440ade07a64d8a2 2035 SMART SM00823 Phosphopantetheine attachment site 1949 2017 0.0023 T 22-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 YE2617 49b85b1f095be877c440ade07a64d8a2 2035 PANTHER PTHR24095 1337 1805 0.0 T 22-04-2016 YE2617 49b85b1f095be877c440ade07a64d8a2 2035 PANTHER PTHR24095 22 1003 0.0 T 22-04-2016 YE2617 49b85b1f095be877c440ade07a64d8a2 2035 Gene3D G3DSA:2.30.38.10 880 956 6.0E-21 T 22-04-2016 YE2617 49b85b1f095be877c440ade07a64d8a2 2035 ProSitePatterns PS00012 Phosphopantetheine attachment site. 47 62 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site YE2617 49b85b1f095be877c440ade07a64d8a2 2035 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 594 990 2.1E-117 T 22-04-2016 IPR010071 Amino acid adenylation domain YE2617 49b85b1f095be877c440ade07a64d8a2 2035 Gene3D G3DSA:1.10.1200.10 1938 2015 4.2E-11 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YE2617 49b85b1f095be877c440ade07a64d8a2 2035 Gene3D G3DSA:1.10.1200.10 22 92 1.6E-7 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YE2617 49b85b1f095be877c440ade07a64d8a2 2035 Gene3D G3DSA:1.10.1200.10 1413 1476 6.7E-21 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YE2617 49b85b1f095be877c440ade07a64d8a2 2035 Gene3D G3DSA:3.40.50.980 568 715 3.4E-34 T 22-04-2016 YE2617 49b85b1f095be877c440ade07a64d8a2 2035 SUPERFAMILY SSF52777 296 536 1.08E-37 T 22-04-2016 YE2617 49b85b1f095be877c440ade07a64d8a2 2035 Pfam PF00501 AMP-binding enzyme 575 965 2.8E-89 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 YE2617 49b85b1f095be877c440ade07a64d8a2 2035 Pfam PF08415 Nonribosomal peptide synthase 431 486 3.2E-17 T 22-04-2016 IPR013624 Non-ribosomal peptide synthetase YE2617 49b85b1f095be877c440ade07a64d8a2 2035 Pfam PF08415 Nonribosomal peptide synthase 1802 1858 6.0E-17 T 22-04-2016 IPR013624 Non-ribosomal peptide synthetase YE2617 49b85b1f095be877c440ade07a64d8a2 2035 Gene3D G3DSA:3.40.50.150 1162 1290 8.7E-12 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE2617 49b85b1f095be877c440ade07a64d8a2 2035 Pfam PF00550 Phosphopantetheine attachment site 22 82 3.2E-7 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YE2617 49b85b1f095be877c440ade07a64d8a2 2035 Pfam PF00550 Phosphopantetheine attachment site 1412 1473 3.3E-9 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YE2617 49b85b1f095be877c440ade07a64d8a2 2035 Pfam PF00550 Phosphopantetheine attachment site 1952 2013 1.6E-7 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YE2617 49b85b1f095be877c440ade07a64d8a2 2035 Pfam PF08242 Methyltransferase domain 1182 1279 3.1E-9 T 22-04-2016 IPR013217 Methyltransferase type 12 YE2617 49b85b1f095be877c440ade07a64d8a2 2035 ProSitePatterns PS00455 Putative AMP-binding domain signature. 709 720 - T 22-04-2016 IPR020845 AMP-binding, conserved site YE2617 49b85b1f095be877c440ade07a64d8a2 2035 PANTHER PTHR24095:SF137 1337 1805 0.0 T 22-04-2016 YE2617 49b85b1f095be877c440ade07a64d8a2 2035 PANTHER PTHR24095:SF137 22 1003 0.0 T 22-04-2016 YE2617 49b85b1f095be877c440ade07a64d8a2 2035 SUPERFAMILY SSF47336 1946 2014 7.2E-9 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YE2617 49b85b1f095be877c440ade07a64d8a2 2035 Pfam PF00668 Condensation domain 1495 1778 3.3E-35 T 22-04-2016 IPR001242 Condensation domain YE2617 49b85b1f095be877c440ade07a64d8a2 2035 Pfam PF00668 Condensation domain 112 409 3.2E-70 T 22-04-2016 IPR001242 Condensation domain YE2617 49b85b1f095be877c440ade07a64d8a2 2035 SUPERFAMILY SSF52777 1669 1910 1.78E-40 T 22-04-2016 YE2617 49b85b1f095be877c440ade07a64d8a2 2035 Gene3D G3DSA:3.30.300.30 962 1014 1.2E-30 T 22-04-2016 YE2617 49b85b1f095be877c440ade07a64d8a2 2035 Gene3D G3DSA:3.30.300.30 1349 1412 1.2E-30 T 22-04-2016 YE2617 49b85b1f095be877c440ade07a64d8a2 2035 SUPERFAMILY SSF52777 117 289 3.34E-18 T 22-04-2016 YE2617 49b85b1f095be877c440ade07a64d8a2 2035 SUPERFAMILY SSF53335 1166 1328 1.87E-15 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE3109 d2f0f2e3714b7f5c71ac4cd163a4d227 292 PANTHER PTHR30477:SF16 8 291 1.1E-81 T 22-04-2016 YE3109 d2f0f2e3714b7f5c71ac4cd163a4d227 292 Gene3D G3DSA:3.40.50.1980 18 170 3.1E-48 T 22-04-2016 YE3109 d2f0f2e3714b7f5c71ac4cd163a4d227 292 PRINTS PR00691 Adhesin B signature 23 44 1.1E-20 T 22-04-2016 IPR006129 Adhesin B GO:0007155 YE3109 d2f0f2e3714b7f5c71ac4cd163a4d227 292 PRINTS PR00691 Adhesin B signature 178 195 1.1E-20 T 22-04-2016 IPR006129 Adhesin B GO:0007155 YE3109 d2f0f2e3714b7f5c71ac4cd163a4d227 292 PRINTS PR00691 Adhesin B signature 227 244 1.1E-20 T 22-04-2016 IPR006129 Adhesin B GO:0007155 YE3109 d2f0f2e3714b7f5c71ac4cd163a4d227 292 PRINTS PR00691 Adhesin B signature 67 86 1.1E-20 T 22-04-2016 IPR006129 Adhesin B GO:0007155 YE3109 d2f0f2e3714b7f5c71ac4cd163a4d227 292 PRINTS PR00691 Adhesin B signature 48 66 1.1E-20 T 22-04-2016 IPR006129 Adhesin B GO:0007155 YE3109 d2f0f2e3714b7f5c71ac4cd163a4d227 292 PRINTS PR00691 Adhesin B signature 270 288 1.1E-20 T 22-04-2016 IPR006129 Adhesin B GO:0007155 YE3109 d2f0f2e3714b7f5c71ac4cd163a4d227 292 Pfam PF01297 Zinc-uptake complex component A periplasmic 27 288 1.1E-78 T 22-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 YE3109 d2f0f2e3714b7f5c71ac4cd163a4d227 292 PANTHER PTHR30477 8 291 1.1E-81 T 22-04-2016 YE3109 d2f0f2e3714b7f5c71ac4cd163a4d227 292 SUPERFAMILY SSF53807 20 292 8.34E-84 T 22-04-2016 YE3109 d2f0f2e3714b7f5c71ac4cd163a4d227 292 PRINTS PR00690 Adhesin family signature 257 276 7.2E-28 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 YE3109 d2f0f2e3714b7f5c71ac4cd163a4d227 292 PRINTS PR00690 Adhesin family signature 178 199 7.2E-28 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 YE3109 d2f0f2e3714b7f5c71ac4cd163a4d227 292 PRINTS PR00690 Adhesin family signature 67 84 7.2E-28 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 YE3109 d2f0f2e3714b7f5c71ac4cd163a4d227 292 PRINTS PR00690 Adhesin family signature 54 67 7.2E-28 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 YE3109 d2f0f2e3714b7f5c71ac4cd163a4d227 292 PRINTS PR00690 Adhesin family signature 23 41 7.2E-28 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 YE3109 d2f0f2e3714b7f5c71ac4cd163a4d227 292 PRINTS PR00690 Adhesin family signature 231 249 7.2E-28 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 YE3109 d2f0f2e3714b7f5c71ac4cd163a4d227 292 Gene3D G3DSA:3.40.50.1980 171 292 6.9E-43 T 22-04-2016 YE3606 ae753dd259a04a136fafdeb917189f7a 564 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 39 64 - T 22-04-2016 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 YE3606 ae753dd259a04a136fafdeb917189f7a 564 PANTHER PTHR11993 1 116 1.0E-184 T 22-04-2016 YE3606 ae753dd259a04a136fafdeb917189f7a 564 PANTHER PTHR11993 348 556 1.0E-184 T 22-04-2016 YE3606 ae753dd259a04a136fafdeb917189f7a 564 PANTHER PTHR11993 186 255 1.0E-184 T 22-04-2016 YE3606 ae753dd259a04a136fafdeb917189f7a 564 SUPERFAMILY SSF56762 1 549 2.88E-168 T 22-04-2016 IPR029014 NiFe hydrogenase-like YE3606 ae753dd259a04a136fafdeb917189f7a 564 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 540 549 - T 22-04-2016 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 YE3606 ae753dd259a04a136fafdeb917189f7a 564 PANTHER PTHR11993:SF26 1 116 1.0E-184 T 22-04-2016 YE3606 ae753dd259a04a136fafdeb917189f7a 564 PANTHER PTHR11993:SF26 348 556 1.0E-184 T 22-04-2016 YE3606 ae753dd259a04a136fafdeb917189f7a 564 PANTHER PTHR11993:SF26 186 255 1.0E-184 T 22-04-2016 YE3606 ae753dd259a04a136fafdeb917189f7a 564 Gene3D G3DSA:1.10.645.10 1 549 1.8E-206 T 22-04-2016 IPR029014 NiFe hydrogenase-like YE3606 ae753dd259a04a136fafdeb917189f7a 564 Pfam PF00374 Nickel-dependent hydrogenase 39 549 1.3E-205 T 22-04-2016 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 YE2739 03cffa5e0a72b144de32738a6190ee4e 91 PANTHER PTHR36539 1 90 1.4E-34 T 22-04-2016 YE2739 03cffa5e0a72b144de32738a6190ee4e 91 Pfam PF03319 Ethanolamine utilisation protein EutN/carboxysome 1 87 1.7E-28 T 22-04-2016 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml YE2739 03cffa5e0a72b144de32738a6190ee4e 91 PANTHER PTHR36539:SF1 1 90 1.4E-34 T 22-04-2016 YE2739 03cffa5e0a72b144de32738a6190ee4e 91 Gene3D G3DSA:2.40.50.220 1 90 8.4E-31 T 22-04-2016 IPR023414 Ethanolamine utilization protein-like domain YE2739 03cffa5e0a72b144de32738a6190ee4e 91 SUPERFAMILY SSF159133 1 90 7.98E-25 T 22-04-2016 IPR023414 Ethanolamine utilization protein-like domain YE2739 03cffa5e0a72b144de32738a6190ee4e 91 ProDom PD012510 UTILIZATION ETHANOLAMINE CARBOXYSOME CCML PEPTIDE EUTN/CARBOXYSOME STRUCTURAL EUTN A B 11 87 2.0E-25 T 22-04-2016 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml YE2167 ae4c2e41311600345bbeed7b380bd623 140 Pfam PF02657 Fe-S metabolism associated domain 12 132 4.7E-44 T 22-04-2016 IPR003808 Fe-S metabolism associated domain, SufE-like UniPathway: UPA00266 YE2167 ae4c2e41311600345bbeed7b380bd623 140 PANTHER PTHR12735 1 139 1.5E-66 T 22-04-2016 YE2167 ae4c2e41311600345bbeed7b380bd623 140 SUPERFAMILY SSF82649 4 134 6.28E-46 T 22-04-2016 YE2167 ae4c2e41311600345bbeed7b380bd623 140 Gene3D G3DSA:3.90.1010.10 4 137 8.2E-53 T 22-04-2016 YE2167 ae4c2e41311600345bbeed7b380bd623 140 Hamap MF_01832 Cysteine desulfuration protein SufE [sufE]. 1 138 43.037 T 22-04-2016 IPR023939 Cysteine desulfuration protein SufE GO:0006790|GO:0016226 UniPathway: UPA00266 YE2167 ae4c2e41311600345bbeed7b380bd623 140 PANTHER PTHR12735:SF26 1 139 1.5E-66 T 22-04-2016 YE0894 21e8d8d5178dd23c65ba90e3206c48bb 369 Gene3D G3DSA:3.40.50.150 112 350 4.6E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE0894 21e8d8d5178dd23c65ba90e3206c48bb 369 PANTHER PTHR11746 12 305 4.1E-32 T 22-04-2016 YE0894 21e8d8d5178dd23c65ba90e3206c48bb 369 PIRSF PIRSF005739 10 363 6.1E-5 T 22-04-2016 IPR016461 O-methyltransferase COMT-type GO:0008168 YE0894 21e8d8d5178dd23c65ba90e3206c48bb 369 SUPERFAMILY SSF53335 112 353 1.14E-36 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE0894 21e8d8d5178dd23c65ba90e3206c48bb 369 Pfam PF00891 O-methyltransferase 189 347 1.1E-15 T 22-04-2016 IPR001077 O-methyltransferase, family 2 GO:0008171 YE0894 21e8d8d5178dd23c65ba90e3206c48bb 369 PANTHER PTHR11746:SF63 12 305 4.1E-32 T 22-04-2016 YE0350 ffa14a9206df14c97cd7a78c9dd63f4c 433 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 433 1.6E-195 T 22-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 YE0350 ffa14a9206df14c97cd7a78c9dd63f4c 433 PIRSF PIRSF004539 1 433 2.1E-174 T 22-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 YE0350 ffa14a9206df14c97cd7a78c9dd63f4c 433 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 365 1.1E-141 T 22-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 YE0350 ffa14a9206df14c97cd7a78c9dd63f4c 433 PANTHER PTHR36106:SF2 1 433 0.0 T 22-04-2016 YE0350 ffa14a9206df14c97cd7a78c9dd63f4c 433 PANTHER PTHR36106 1 433 0.0 T 22-04-2016 YE0931 59d9c02091f6b9ab57c0f8937868a988 484 PANTHER PTHR11751 91 480 1.5E-103 T 22-04-2016 YE0931 59d9c02091f6b9ab57c0f8937868a988 484 SUPERFAMILY SSF53383 79 478 2.42E-78 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YE0931 59d9c02091f6b9ab57c0f8937868a988 484 SUPERFAMILY SSF46785 12 85 8.02E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0931 59d9c02091f6b9ab57c0f8937868a988 484 Gene3D G3DSA:3.40.640.10 151 366 3.0E-54 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YE0931 59d9c02091f6b9ab57c0f8937868a988 484 Pfam PF00155 Aminotransferase class I and II 152 419 7.0E-20 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YE0931 59d9c02091f6b9ab57c0f8937868a988 484 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 56 72 7.4E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YE0931 59d9c02091f6b9ab57c0f8937868a988 484 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 56 7.4E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YE0931 59d9c02091f6b9ab57c0f8937868a988 484 Pfam PF00392 Bacterial regulatory proteins, gntR family 20 82 2.1E-17 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YE0931 59d9c02091f6b9ab57c0f8937868a988 484 Gene3D G3DSA:1.10.10.10 10 83 3.6E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0931 59d9c02091f6b9ab57c0f8937868a988 484 SMART SM00345 23 82 8.1E-18 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YE0931 59d9c02091f6b9ab57c0f8937868a988 484 PANTHER PTHR11751:SF10 91 480 1.5E-103 T 22-04-2016 YE1883 fb6c28221e23177b47c9b124124d77b6 375 SMART SM00382 29 217 2.0E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YE1883 fb6c28221e23177b47c9b124124d77b6 375 PANTHER PTHR24220 5 318 7.2E-154 T 22-04-2016 YE1883 fb6c28221e23177b47c9b124124d77b6 375 PANTHER PTHR24220:SF151 5 318 7.2E-154 T 22-04-2016 YE1883 fb6c28221e23177b47c9b124124d77b6 375 Gene3D G3DSA:2.40.50.140 293 339 6.6E-4 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE1883 fb6c28221e23177b47c9b124124d77b6 375 Pfam PF00005 ABC transporter 21 162 7.6E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE1883 fb6c28221e23177b47c9b124124d77b6 375 SUPERFAMILY SSF52540 6 247 2.02E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1883 fb6c28221e23177b47c9b124124d77b6 375 Gene3D G3DSA:3.40.50.300 6 240 2.5E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1883 fb6c28221e23177b47c9b124124d77b6 375 Gene3D G3DSA:2.40.50.100 245 292 1.1E-12 T 22-04-2016 YE1883 fb6c28221e23177b47c9b124124d77b6 375 Gene3D G3DSA:2.40.50.100 359 373 1.1E-12 T 22-04-2016 YE1883 fb6c28221e23177b47c9b124124d77b6 375 SUPERFAMILY SSF50331 243 373 1.41E-21 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal YE1883 fb6c28221e23177b47c9b124124d77b6 375 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE1883 fb6c28221e23177b47c9b124124d77b6 375 Pfam PF08402 TOBE domain 289 365 1.2E-4 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 YE2439 80e19feb716470167d75a4cbf6de0494 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 4.4E-175 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 YE2439 80e19feb716470167d75a4cbf6de0494 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.9E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YE2439 80e19feb716470167d75a4cbf6de0494 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.9E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YE2439 80e19feb716470167d75a4cbf6de0494 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.9E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YE2439 80e19feb716470167d75a4cbf6de0494 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.9E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YE2439 80e19feb716470167d75a4cbf6de0494 363 Gene3D G3DSA:1.10.150.300 131 200 4.2E-29 T 22-04-2016 IPR023192 TGS-like domain YE2439 80e19feb716470167d75a4cbf6de0494 363 SUPERFAMILY SSF81271 279 359 4.58E-36 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 YE2439 80e19feb716470167d75a4cbf6de0494 363 PIRSF PIRSF006641 1 363 3.4E-158 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 YE2439 80e19feb716470167d75a4cbf6de0494 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 46.829 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 YE2439 80e19feb716470167d75a4cbf6de0494 363 SUPERFAMILY SSF52540 3 301 1.21E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2439 80e19feb716470167d75a4cbf6de0494 363 Pfam PF01926 50S ribosome-binding GTPase 5 122 4.1E-21 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YE2439 80e19feb716470167d75a4cbf6de0494 363 PANTHER PTHR23305 1 363 6.5E-216 T 22-04-2016 YE2439 80e19feb716470167d75a4cbf6de0494 363 Gene3D G3DSA:3.40.50.300 4 130 3.7E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2439 80e19feb716470167d75a4cbf6de0494 363 Gene3D G3DSA:3.40.50.300 201 267 3.7E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2439 80e19feb716470167d75a4cbf6de0494 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 1.6E-39 T 22-04-2016 IPR013029 Domain of unknown function DUF933 YE2439 80e19feb716470167d75a4cbf6de0494 363 Gene3D G3DSA:3.10.20.30 268 363 5.1E-50 T 22-04-2016 IPR012675 Beta-grasp domain YE1115 32c08a28c4d606aa17a0b53a2e4ee1bd 450 Gene3D G3DSA:3.30.420.40 218 241 3.1E-17 T 22-04-2016 YE1115 32c08a28c4d606aa17a0b53a2e4ee1bd 450 Gene3D G3DSA:3.30.420.40 374 433 3.1E-17 T 22-04-2016 YE1115 32c08a28c4d606aa17a0b53a2e4ee1bd 450 PANTHER PTHR19375:SF182 331 442 4.3E-146 T 22-04-2016 YE1115 32c08a28c4d606aa17a0b53a2e4ee1bd 450 PANTHER PTHR19375:SF182 2 44 4.3E-146 T 22-04-2016 YE1115 32c08a28c4d606aa17a0b53a2e4ee1bd 450 PANTHER PTHR19375:SF182 85 269 4.3E-146 T 22-04-2016 YE1115 32c08a28c4d606aa17a0b53a2e4ee1bd 450 SUPERFAMILY SSF53067 208 276 2.84E-32 T 22-04-2016 YE1115 32c08a28c4d606aa17a0b53a2e4ee1bd 450 SUPERFAMILY SSF53067 328 447 2.84E-32 T 22-04-2016 YE1115 32c08a28c4d606aa17a0b53a2e4ee1bd 450 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 213 226 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site YE1115 32c08a28c4d606aa17a0b53a2e4ee1bd 450 PANTHER PTHR19375 331 442 4.3E-146 T 22-04-2016 YE1115 32c08a28c4d606aa17a0b53a2e4ee1bd 450 PANTHER PTHR19375 2 44 4.3E-146 T 22-04-2016 YE1115 32c08a28c4d606aa17a0b53a2e4ee1bd 450 PANTHER PTHR19375 85 269 4.3E-146 T 22-04-2016 YE1115 32c08a28c4d606aa17a0b53a2e4ee1bd 450 SUPERFAMILY SSF53067 85 204 5.18E-26 T 22-04-2016 YE1115 32c08a28c4d606aa17a0b53a2e4ee1bd 450 SUPERFAMILY SSF53067 1 44 5.18E-26 T 22-04-2016 YE1115 32c08a28c4d606aa17a0b53a2e4ee1bd 450 Pfam PF00012 Hsp70 protein 130 228 2.6E-8 T 22-04-2016 IPR013126 Heat shock protein 70 family YE1115 32c08a28c4d606aa17a0b53a2e4ee1bd 450 Pfam PF00012 Hsp70 protein 331 422 3.7E-6 T 22-04-2016 IPR013126 Heat shock protein 70 family YE1115 32c08a28c4d606aa17a0b53a2e4ee1bd 450 Gene3D G3DSA:3.30.420.40 85 217 1.5E-27 T 22-04-2016 YE1115 32c08a28c4d606aa17a0b53a2e4ee1bd 450 Gene3D G3DSA:3.30.420.40 2 43 1.5E-27 T 22-04-2016 YE3297 f5548919defac5fb6bcdee0cac0b1256 251 Gene3D G3DSA:3.40.50.1010 4 174 4.4E-50 T 22-04-2016 IPR029060 PIN domain-like YE3297 f5548919defac5fb6bcdee0cac0b1256 251 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 159 4.0E-31 T 22-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 YE3297 f5548919defac5fb6bcdee0cac0b1256 251 PANTHER PTHR10133:SF39 1 250 1.2E-172 T 22-04-2016 YE3297 f5548919defac5fb6bcdee0cac0b1256 251 SUPERFAMILY SSF88723 4 159 9.32E-40 T 22-04-2016 IPR029060 PIN domain-like YE3297 f5548919defac5fb6bcdee0cac0b1256 251 SUPERFAMILY SSF47807 160 242 2.99E-23 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 YE3297 f5548919defac5fb6bcdee0cac0b1256 251 Hamap MF_01192 Flap endonuclease Xni [xni]. 2 251 44.553 T 22-04-2016 IPR022895 Flap endonuclease Xni GO:0048256 YE3297 f5548919defac5fb6bcdee0cac0b1256 251 Gene3D G3DSA:1.10.150.20 175 235 3.0E-24 T 22-04-2016 YE3297 f5548919defac5fb6bcdee0cac0b1256 251 SMART SM00279 162 197 3.9E-10 T 22-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 YE3297 f5548919defac5fb6bcdee0cac0b1256 251 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 160 250 2.1E-26 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 YE3297 f5548919defac5fb6bcdee0cac0b1256 251 SMART SM00475 3 250 2.0E-95 T 22-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 YE3297 f5548919defac5fb6bcdee0cac0b1256 251 PANTHER PTHR10133 1 250 1.2E-172 T 22-04-2016 YE3893 acb90fd7d28fe194fcb54cfc0b58bd78 136 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 22-04-2016 IPR019823 Large-conductance mechanosensitive channel, conserved site YE3893 acb90fd7d28fe194fcb54cfc0b58bd78 136 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 84 92 3.6E-12 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 YE3893 acb90fd7d28fe194fcb54cfc0b58bd78 136 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 3.6E-12 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 YE3893 acb90fd7d28fe194fcb54cfc0b58bd78 136 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 93 102 3.6E-12 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 YE3893 acb90fd7d28fe194fcb54cfc0b58bd78 136 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 134 29.4 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 YE3893 acb90fd7d28fe194fcb54cfc0b58bd78 136 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 3 131 5.5E-46 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 YE3893 acb90fd7d28fe194fcb54cfc0b58bd78 136 PANTHER PTHR30266 1 134 1.3E-60 T 22-04-2016 YE3893 acb90fd7d28fe194fcb54cfc0b58bd78 136 SUPERFAMILY SSF81330 12 127 3.01E-35 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 YE3893 acb90fd7d28fe194fcb54cfc0b58bd78 136 PANTHER PTHR30266:SF2 1 134 1.3E-60 T 22-04-2016 YE3893 acb90fd7d28fe194fcb54cfc0b58bd78 136 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 133 6.5E-54 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 YE1444 f559c5b7f1e4297f9ff8ac4a1662a0ec 826 SUPERFAMILY SSF50692 676 820 3.16E-38 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain YE1444 f559c5b7f1e4297f9ff8ac4a1662a0ec 826 Pfam PF00384 Molybdopterin oxidoreductase 105 563 8.6E-94 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 YE1444 f559c5b7f1e4297f9ff8ac4a1662a0ec 826 Gene3D G3DSA:3.90.55.10 508 611 1.6E-36 T 22-04-2016 YE1444 f559c5b7f1e4297f9ff8ac4a1662a0ec 826 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 62 823 0.0 T 22-04-2016 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 YE1444 f559c5b7f1e4297f9ff8ac4a1662a0ec 826 Gene3D G3DSA:3.40.228.10 201 410 6.1E-62 T 22-04-2016 YE1444 f559c5b7f1e4297f9ff8ac4a1662a0ec 826 Gene3D G3DSA:3.40.50.740 411 507 1.5E-49 T 22-04-2016 YE1444 f559c5b7f1e4297f9ff8ac4a1662a0ec 826 Gene3D G3DSA:3.40.50.740 99 200 1.5E-49 T 22-04-2016 YE1444 f559c5b7f1e4297f9ff8ac4a1662a0ec 826 Pfam PF01568 Molydopterin dinucleotide binding domain 683 797 3.4E-24 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 YE1444 f559c5b7f1e4297f9ff8ac4a1662a0ec 826 PANTHER PTHR11615:SF19 1 826 4.0E-294 T 22-04-2016 YE1444 f559c5b7f1e4297f9ff8ac4a1662a0ec 826 SUPERFAMILY SSF53706 63 683 7.2E-171 T 22-04-2016 YE1444 f559c5b7f1e4297f9ff8ac4a1662a0ec 826 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 506 523 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 YE1444 f559c5b7f1e4297f9ff8ac4a1662a0ec 826 PANTHER PTHR11615 1 826 4.0E-294 T 22-04-2016 YE1444 f559c5b7f1e4297f9ff8ac4a1662a0ec 826 Gene3D G3DSA:2.40.40.20 657 819 2.7E-55 T 22-04-2016 YE0891 192bd9c4a1b08728fe1456f3d5361df7 325 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 YE0891 192bd9c4a1b08728fe1456f3d5361df7 325 Pfam PF01479 S4 domain 18 65 1.7E-11 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YE0891 192bd9c4a1b08728fe1456f3d5361df7 325 SUPERFAMILY SSF55120 77 321 3.5E-79 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 YE0891 192bd9c4a1b08728fe1456f3d5361df7 325 PANTHER PTHR11079:SF73 6 323 3.4E-157 T 22-04-2016 YE0891 192bd9c4a1b08728fe1456f3d5361df7 325 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 14 313 9.9E-108 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 YE0891 192bd9c4a1b08728fe1456f3d5361df7 325 SUPERFAMILY SSF55174 17 69 1.6E-11 T 22-04-2016 YE0891 192bd9c4a1b08728fe1456f3d5361df7 325 PANTHER PTHR11079 6 323 3.4E-157 T 22-04-2016 YE0891 192bd9c4a1b08728fe1456f3d5361df7 325 Gene3D G3DSA:3.10.290.10 18 69 2.3E-13 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YE0891 192bd9c4a1b08728fe1456f3d5361df7 325 Pfam PF00849 RNA pseudouridylate synthase 92 242 2.5E-32 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 YE0891 192bd9c4a1b08728fe1456f3d5361df7 325 SMART SM00363 18 83 4.1E-11 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YE0889 7c2f60ae203001ef517023bbf018d18b 120 SUPERFAMILY SSF69754 3 105 8.11E-32 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 YE0889 7c2f60ae203001ef517023bbf018d18b 120 PANTHER PTHR33231:SF3 1 117 2.9E-71 T 22-04-2016 YE0889 7c2f60ae203001ef517023bbf018d18b 120 PANTHER PTHR33231 1 117 2.9E-71 T 22-04-2016 YE0889 7c2f60ae203001ef517023bbf018d18b 120 Gene3D G3DSA:3.30.160.100 3 91 4.6E-31 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 YE0889 7c2f60ae203001ef517023bbf018d18b 120 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 91 2.1E-21 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 YE0889 7c2f60ae203001ef517023bbf018d18b 120 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 97 2.5E-32 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 YE1520 e4a4ecb6bc96fc5c2d18ac78a12f4878 236 PANTHER PTHR30098:SF2 1 229 2.9E-90 T 22-04-2016 YE1520 e4a4ecb6bc96fc5c2d18ac78a12f4878 236 PANTHER PTHR30098 1 229 2.9E-90 T 22-04-2016 YE1520 e4a4ecb6bc96fc5c2d18ac78a12f4878 236 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 36 203 2.8E-73 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 YE1520 e4a4ecb6bc96fc5c2d18ac78a12f4878 236 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 236 97.505 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 YE1520 e4a4ecb6bc96fc5c2d18ac78a12f4878 236 SUPERFAMILY SSF55729 3 229 1.17E-94 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE1520 e4a4ecb6bc96fc5c2d18ac78a12f4878 236 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 39 214 1.8E-76 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 YE4172 03114528ca550b8114ee1ce16e723f64 366 SUPERFAMILY SSF55979 125 244 9.42E-31 T 22-04-2016 YE4172 03114528ca550b8114ee1ce16e723f64 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 1.0E-43 T 22-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE4172 03114528ca550b8114ee1ce16e723f64 366 Gene3D G3DSA:3.10.150.10 1 121 3.6E-31 T 22-04-2016 YE4172 03114528ca550b8114ee1ce16e723f64 366 PIRSF PIRSF000804 1 366 1.8E-115 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE4172 03114528ca550b8114ee1ce16e723f64 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 129 243 5.0E-40 T 22-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE4172 03114528ca550b8114ee1ce16e723f64 366 SUPERFAMILY SSF55979 1 121 2.47E-26 T 22-04-2016 YE4172 03114528ca550b8114ee1ce16e723f64 366 SUPERFAMILY SSF55979 245 366 9.42E-37 T 22-04-2016 YE4172 03114528ca550b8114ee1ce16e723f64 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 3.0E-111 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE4172 03114528ca550b8114ee1ce16e723f64 366 Gene3D G3DSA:3.10.150.10 122 248 2.1E-39 T 22-04-2016 YE4172 03114528ca550b8114ee1ce16e723f64 366 PANTHER PTHR30478 2 366 7.3E-147 T 22-04-2016 YE4172 03114528ca550b8114ee1ce16e723f64 366 Gene3D G3DSA:3.10.150.10 249 366 6.6E-38 T 22-04-2016 YE4172 03114528ca550b8114ee1ce16e723f64 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 120 2.2E-38 T 22-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE4172 03114528ca550b8114ee1ce16e723f64 366 SMART SM00480 17 362 5.3E-165 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE0561 42a70704794ed6705a607f7dff3c2865 347 Gene3D G3DSA:3.40.50.150 163 331 5.9E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE0561 42a70704794ed6705a607f7dff3c2865 347 PANTHER PTHR18895 53 345 8.3E-172 T 22-04-2016 YE0561 42a70704794ed6705a607f7dff3c2865 347 PANTHER PTHR18895:SF70 53 345 8.3E-172 T 22-04-2016 YE0561 42a70704794ed6705a607f7dff3c2865 347 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 4 336 44.87 T 22-04-2016 IPR023543 rRNA small subunit methyltransferase C GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YE0561 42a70704794ed6705a607f7dff3c2865 347 Pfam PF05175 Methyltransferase small domain 167 333 1.6E-57 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 YE0561 42a70704794ed6705a607f7dff3c2865 347 Pfam PF08468 Methyltransferase small domain N-terminal 8 162 1.4E-57 T 22-04-2016 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YE0561 42a70704794ed6705a607f7dff3c2865 347 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 265 271 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 YE0561 42a70704794ed6705a607f7dff3c2865 347 SUPERFAMILY SSF53335 154 315 1.46E-26 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE0464 3d2b0b1f2c6e60099f0598b3dbd32b1e 388 PANTHER PTHR41379:SF1 1 388 4.2E-176 T 22-04-2016 YE0464 3d2b0b1f2c6e60099f0598b3dbd32b1e 388 PANTHER PTHR41379 1 388 4.2E-176 T 22-04-2016 YE0464 3d2b0b1f2c6e60099f0598b3dbd32b1e 388 SUPERFAMILY SSF48230 63 338 1.46E-56 T 22-04-2016 IPR008929 Chondroitin AC/alginate lyase YE0464 3d2b0b1f2c6e60099f0598b3dbd32b1e 388 Pfam PF05426 Alginate lyase 56 335 3.1E-76 T 22-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 YE0464 3d2b0b1f2c6e60099f0598b3dbd32b1e 388 Gene3D G3DSA:1.50.10.110 38 344 2.5E-80 T 22-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 YE1733 7c2b6a45fd1f706de186808ca35f5db5 137 Gene3D G3DSA:2.10.109.10 23 136 1.0E-34 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain YE1733 7c2b6a45fd1f706de186808ca35f5db5 137 PANTHER PTHR33516:SF1 27 137 1.4E-30 T 22-04-2016 YE1733 7c2b6a45fd1f706de186808ca35f5db5 137 PANTHER PTHR33516 27 137 1.4E-30 T 22-04-2016 YE1733 7c2b6a45fd1f706de186808ca35f5db5 137 SUPERFAMILY SSF51306 29 132 4.19E-25 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C YE1733 7c2b6a45fd1f706de186808ca35f5db5 137 Pfam PF00717 Peptidase S24-like 54 105 4.5E-8 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B YE2541 40e042e3f0ba4a855ebdf3c20d840b35 148 PRINTS PR01004 Flagellar FliJ protein signature 108 126 4.8E-43 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 YE2541 40e042e3f0ba4a855ebdf3c20d840b35 148 PRINTS PR01004 Flagellar FliJ protein signature 126 146 4.8E-43 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 YE2541 40e042e3f0ba4a855ebdf3c20d840b35 148 PRINTS PR01004 Flagellar FliJ protein signature 4 26 4.8E-43 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 YE2541 40e042e3f0ba4a855ebdf3c20d840b35 148 PRINTS PR01004 Flagellar FliJ protein signature 63 84 4.8E-43 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 YE2541 40e042e3f0ba4a855ebdf3c20d840b35 148 PRINTS PR01004 Flagellar FliJ protein signature 44 61 4.8E-43 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 YE2541 40e042e3f0ba4a855ebdf3c20d840b35 148 PRINTS PR01004 Flagellar FliJ protein signature 27 43 4.8E-43 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 YE2541 40e042e3f0ba4a855ebdf3c20d840b35 148 PRINTS PR01004 Flagellar FliJ protein signature 86 107 4.8E-43 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 YE2541 40e042e3f0ba4a855ebdf3c20d840b35 148 PANTHER PTHR38786 1 148 2.4E-51 T 22-04-2016 YE2541 40e042e3f0ba4a855ebdf3c20d840b35 148 Pfam PF02050 Flagellar FliJ protein 19 141 7.2E-36 T 22-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 YE2541 40e042e3f0ba4a855ebdf3c20d840b35 148 PIRSF PIRSF019404 1 148 9.4E-51 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 YE2541 40e042e3f0ba4a855ebdf3c20d840b35 148 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 5 143 3.5E-35 T 22-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 YE0788 d70fd38926cfd27830ee36d66c424a65 62 Pfam PF15959 Domain of unknown function (DUF4762) 1 61 7.3E-13 T 22-04-2016 IPR031882 Protein of unknown function DUF4762 YE3320 6b8ab2642855a6f4bdc4ce78f297402b 175 PRINTS PR00502 NUDIX hydrolase family signature 47 62 6.2E-8 T 22-04-2016 IPR020476 NUDIX hydrolase YE3320 6b8ab2642855a6f4bdc4ce78f297402b 175 PRINTS PR00502 NUDIX hydrolase family signature 33 47 6.2E-8 T 22-04-2016 IPR020476 NUDIX hydrolase YE3320 6b8ab2642855a6f4bdc4ce78f297402b 175 Gene3D G3DSA:3.90.79.10 3 151 4.0E-33 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YE3320 6b8ab2642855a6f4bdc4ce78f297402b 175 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 38.171 T 22-04-2016 IPR022927 RNA pyrophosphohydrolase RppH YE3320 6b8ab2642855a6f4bdc4ce78f297402b 175 Pfam PF00293 NUDIX domain 7 146 1.3E-28 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 YE3320 6b8ab2642855a6f4bdc4ce78f297402b 175 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 YE3320 6b8ab2642855a6f4bdc4ce78f297402b 175 SUPERFAMILY SSF55811 5 158 8.67E-33 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YE3320 6b8ab2642855a6f4bdc4ce78f297402b 175 PANTHER PTHR23114 1 174 7.8E-73 T 22-04-2016 YE0531 ccc15c951b60afedf3c7347d9f163101 315 SUPERFAMILY SSF53756 2 310 1.88E-60 T 22-04-2016 YE0531 ccc15c951b60afedf3c7347d9f163101 315 PANTHER PTHR30160 1 288 6.7E-73 T 22-04-2016 YE0531 ccc15c951b60afedf3c7347d9f163101 315 TIGRFAM TIGR02201 heptsyl_trn_III: putative lipopolysaccharide heptosyltransferase III 1 308 4.3E-95 T 22-04-2016 IPR011916 Lipopolysaccharide heptosyltransferase III, putative KEGG: 00231+2.-.-.-|UniPathway: UPA00958 YE0531 ccc15c951b60afedf3c7347d9f163101 315 PANTHER PTHR30160:SF1 1 288 6.7E-73 T 22-04-2016 YE0531 ccc15c951b60afedf3c7347d9f163101 315 Gene3D G3DSA:3.40.50.2000 1 122 8.3E-22 T 22-04-2016 YE0531 ccc15c951b60afedf3c7347d9f163101 315 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 41 281 2.7E-43 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 YE0531 ccc15c951b60afedf3c7347d9f163101 315 Gene3D G3DSA:3.40.50.2000 142 310 1.6E-45 T 22-04-2016 YE1470 e5214cee69752c3f8e36753b6e785a06 455 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 32 50 - T 22-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 YE1470 e5214cee69752c3f8e36753b6e785a06 455 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 301 2.1E-65 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YE1470 e5214cee69752c3f8e36753b6e785a06 455 Pfam PF00571 CBS domain 399 448 1.8E-4 T 22-04-2016 IPR000644 CBS domain YE1470 e5214cee69752c3f8e36753b6e785a06 455 Pfam PF00571 CBS domain 344 388 5.2E-7 T 22-04-2016 IPR000644 CBS domain YE1470 e5214cee69752c3f8e36753b6e785a06 455 PANTHER PTHR10314:SF35 3 361 6.3E-122 T 22-04-2016 YE1470 e5214cee69752c3f8e36753b6e785a06 455 SUPERFAMILY SSF53686 4 320 1.44E-94 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YE1470 e5214cee69752c3f8e36753b6e785a06 455 Gene3D G3DSA:3.10.580.10 343 449 6.7E-22 T 22-04-2016 YE1470 e5214cee69752c3f8e36753b6e785a06 455 SMART SM00116 406 451 31.0 T 22-04-2016 IPR000644 CBS domain YE1470 e5214cee69752c3f8e36753b6e785a06 455 SMART SM00116 342 389 5.1E-6 T 22-04-2016 IPR000644 CBS domain YE1470 e5214cee69752c3f8e36753b6e785a06 455 SUPERFAMILY SSF54631 343 452 5.81E-21 T 22-04-2016 YE1470 e5214cee69752c3f8e36753b6e785a06 455 Gene3D G3DSA:3.40.50.1100 42 146 1.5E-37 T 22-04-2016 YE1470 e5214cee69752c3f8e36753b6e785a06 455 Gene3D G3DSA:3.40.50.1100 152 318 2.5E-61 T 22-04-2016 YE1470 e5214cee69752c3f8e36753b6e785a06 455 Gene3D G3DSA:3.40.50.1100 2 41 2.5E-61 T 22-04-2016 YE1470 e5214cee69752c3f8e36753b6e785a06 455 PANTHER PTHR10314 3 361 6.3E-122 T 22-04-2016 YE2740 e981250385702b766122df4f50db8139 338 PIRSF PIRSF036411 1 335 1.0E-102 T 22-04-2016 IPR009221 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, bifunctional PduO YE2740 e981250385702b766122df4f50db8139 338 Gene3D G3DSA:1.20.1200.10 12 175 3.1E-52 T 22-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 YE2740 e981250385702b766122df4f50db8139 338 SUPERFAMILY SSF89028 1 176 3.92E-51 T 22-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 YE2740 e981250385702b766122df4f50db8139 338 PANTHER PTHR12213 1 195 1.5E-68 T 22-04-2016 YE2740 e981250385702b766122df4f50db8139 338 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 9 157 2.0E-44 T 22-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 YE2740 e981250385702b766122df4f50db8139 338 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 4 177 6.0E-47 T 22-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 YE2740 e981250385702b766122df4f50db8139 338 Pfam PF03928 Haem-degrading 207 330 5.4E-25 T 22-04-2016 IPR005624 Haem-degrading YE2740 e981250385702b766122df4f50db8139 338 Pfam PF01923 Cobalamin adenosyltransferase 3 166 2.1E-52 T 22-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 YE2740 e981250385702b766122df4f50db8139 338 SUPERFAMILY SSF143744 203 334 1.7E-35 T 22-04-2016 YE2630 3ffef923716c06712f031e74293ea24b 95 PANTHER PTHR33609:SF1 9 94 3.1E-52 T 22-04-2016 YE2630 3ffef923716c06712f031e74293ea24b 95 SUPERFAMILY SSF46689 8 80 1.61E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE2630 3ffef923716c06712f031e74293ea24b 95 PANTHER PTHR33609 9 94 3.1E-52 T 22-04-2016 YE2630 3ffef923716c06712f031e74293ea24b 95 Gene3D G3DSA:1.10.10.60 20 91 8.5E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE2630 3ffef923716c06712f031e74293ea24b 95 Pfam PF01527 Transposase 9 78 4.1E-21 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 YE2147 a040f8589b17d2af2e5f2323903a316f 674 Pfam PF04632 Fusaric acid resistance protein family 20 661 1.8E-189 T 22-04-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 YE2147 a040f8589b17d2af2e5f2323903a316f 674 PANTHER PTHR30509 302 644 2.6E-136 T 22-04-2016 YE2147 a040f8589b17d2af2e5f2323903a316f 674 PANTHER PTHR30509 20 258 2.6E-136 T 22-04-2016 YE2147 a040f8589b17d2af2e5f2323903a316f 674 PANTHER PTHR30509:SF1 302 644 2.6E-136 T 22-04-2016 YE2147 a040f8589b17d2af2e5f2323903a316f 674 PANTHER PTHR30509:SF1 20 258 2.6E-136 T 22-04-2016 YE4012 33b0627e5b3052df3f487e31f9aa4ac6 662 SMART SM00642 163 560 1.8E-7 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 YE4012 33b0627e5b3052df3f487e31f9aa4ac6 662 PANTHER PTHR10357:SF152 1 630 0.0 T 22-04-2016 YE4012 33b0627e5b3052df3f487e31f9aa4ac6 662 Hamap MF_01248 Glycogen debranching enzyme [glgX]. 1 660 72.723 T 22-04-2016 IPR022844 Glycogen debranching enzyme, bacterial GO:0004553|GO:0005977 UniPathway: UPA00165 YE4012 33b0627e5b3052df3f487e31f9aa4ac6 662 SUPERFAMILY SSF51011 576 632 1.32E-5 T 22-04-2016 YE4012 33b0627e5b3052df3f487e31f9aa4ac6 662 Gene3D G3DSA:2.60.40.10 7 148 7.0E-54 T 22-04-2016 IPR013783 Immunoglobulin-like fold YE4012 33b0627e5b3052df3f487e31f9aa4ac6 662 Gene3D G3DSA:3.20.20.80 149 568 1.3E-104 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 YE4012 33b0627e5b3052df3f487e31f9aa4ac6 662 SUPERFAMILY SSF51445 130 465 8.13E-124 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YE4012 33b0627e5b3052df3f487e31f9aa4ac6 662 SUPERFAMILY SSF51445 494 566 8.13E-124 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YE4012 33b0627e5b3052df3f487e31f9aa4ac6 662 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 7 638 4.9E-275 T 22-04-2016 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 UniPathway: UPA00165 YE4012 33b0627e5b3052df3f487e31f9aa4ac6 662 SUPERFAMILY SSF81296 7 144 5.8E-46 T 22-04-2016 IPR014756 Immunoglobulin E-set YE4012 33b0627e5b3052df3f487e31f9aa4ac6 662 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 11 97 5.4E-21 T 22-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 YE4012 33b0627e5b3052df3f487e31f9aa4ac6 662 PANTHER PTHR10357 1 630 0.0 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 YE4012 33b0627e5b3052df3f487e31f9aa4ac6 662 Pfam PF00128 Alpha amylase, catalytic domain 185 291 2.3E-7 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 YE3283 f80b0d754c1744ed130ec54dd7e02d51 285 ProSitePatterns PS01127 Elongation factor Ts signature 2. 77 87 - T 22-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 YE3283 f80b0d754c1744ed130ec54dd7e02d51 285 Hamap MF_00050 Elongation factor Ts [tsf]. 1 282 79.909 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 YE3283 f80b0d754c1744ed130ec54dd7e02d51 285 Gene3D G3DSA:1.10.8.10 3 55 5.1E-27 T 22-04-2016 YE3283 f80b0d754c1744ed130ec54dd7e02d51 285 Gene3D G3DSA:3.30.479.20 169 184 5.0E-32 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 YE3283 f80b0d754c1744ed130ec54dd7e02d51 285 Gene3D G3DSA:3.30.479.20 57 95 5.0E-32 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 YE3283 f80b0d754c1744ed130ec54dd7e02d51 285 Gene3D G3DSA:3.30.479.20 230 268 5.0E-32 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 YE3283 f80b0d754c1744ed130ec54dd7e02d51 285 SUPERFAMILY SSF54713 56 141 2.62E-21 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 YE3283 f80b0d754c1744ed130ec54dd7e02d51 285 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 284 1.6E-115 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 YE3283 f80b0d754c1744ed130ec54dd7e02d51 285 SUPERFAMILY SSF54713 144 283 3.92E-53 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 YE3283 f80b0d754c1744ed130ec54dd7e02d51 285 PANTHER PTHR11741 1 285 1.6E-145 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 YE3283 f80b0d754c1744ed130ec54dd7e02d51 285 Gene3D G3DSA:1.10.286.20 185 229 9.4E-21 T 22-04-2016 YE3283 f80b0d754c1744ed130ec54dd7e02d51 285 Pfam PF00889 Elongation factor TS 73 265 1.7E-67 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 YE3283 f80b0d754c1744ed130ec54dd7e02d51 285 SUPERFAMILY SSF46934 4 55 4.01E-18 T 22-04-2016 IPR009060 UBA-like GO:0005515 YE0591 07fff63c584df78da9787a07ca01f4dc 175 PANTHER PTHR34699:SF3 1 174 2.0E-109 T 22-04-2016 YE0591 07fff63c584df78da9787a07ca01f4dc 175 Gene3D G3DSA:3.90.950.10 2 168 4.5E-59 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like YE0591 07fff63c584df78da9787a07ca01f4dc 175 SUPERFAMILY SSF52972 1 167 6.98E-56 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like YE0591 07fff63c584df78da9787a07ca01f4dc 175 Hamap MF_00648 Non-canonical purine NTP phosphatase. 2 171 29.053 T 22-04-2016 IPR002786 Non-canonical purine NTP phosphatase YE0591 07fff63c584df78da9787a07ca01f4dc 175 Pfam PF01931 Protein of unknown function DUF84 7 165 1.2E-51 T 22-04-2016 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 YE0591 07fff63c584df78da9787a07ca01f4dc 175 PANTHER PTHR34699 1 174 2.0E-109 T 22-04-2016 YE0591 07fff63c584df78da9787a07ca01f4dc 175 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 7 170 3.9E-49 T 22-04-2016 IPR002786 Non-canonical purine NTP phosphatase YE1546 b52c9cf5b8ce2ddc34217658255fd5d9 69 SMART SM00357 5 69 4.8E-28 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 YE1546 b52c9cf5b8ce2ddc34217658255fd5d9 69 PRINTS PR00050 Cold shock protein signature 27 36 9.0E-16 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YE1546 b52c9cf5b8ce2ddc34217658255fd5d9 69 PRINTS PR00050 Cold shock protein signature 42 60 9.0E-16 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YE1546 b52c9cf5b8ce2ddc34217658255fd5d9 69 PRINTS PR00050 Cold shock protein signature 6 21 9.0E-16 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YE1546 b52c9cf5b8ce2ddc34217658255fd5d9 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 1.2E-30 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YE1546 b52c9cf5b8ce2ddc34217658255fd5d9 69 SUPERFAMILY SSF50249 4 68 1.1E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE1546 b52c9cf5b8ce2ddc34217658255fd5d9 69 Gene3D G3DSA:2.40.50.140 4 67 4.2E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE1546 b52c9cf5b8ce2ddc34217658255fd5d9 69 PANTHER PTHR11544 1 69 5.3E-40 T 22-04-2016 YE1546 b52c9cf5b8ce2ddc34217658255fd5d9 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 22-04-2016 IPR019844 Cold-shock conserved site YE1546 b52c9cf5b8ce2ddc34217658255fd5d9 69 PIRSF PIRSF002599 1 69 2.6E-24 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 YE2260 7434d820e080dadd0923362ea10b1501 616 Pfam PF01343 Peptidase family S49 390 541 3.9E-47 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 YE2260 7434d820e080dadd0923362ea10b1501 616 Pfam PF01343 Peptidase family S49 139 289 7.3E-38 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 YE2260 7434d820e080dadd0923362ea10b1501 616 PANTHER PTHR33209:SF1 1 612 5.8E-239 T 22-04-2016 YE2260 7434d820e080dadd0923362ea10b1501 616 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 607 6.9E-225 T 22-04-2016 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 YE2260 7434d820e080dadd0923362ea10b1501 616 PANTHER PTHR33209 1 612 5.8E-239 T 22-04-2016 YE2260 7434d820e080dadd0923362ea10b1501 616 Gene3D G3DSA:3.90.226.10 321 430 2.9E-66 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YE2260 7434d820e080dadd0923362ea10b1501 616 Gene3D G3DSA:3.90.226.10 467 550 2.9E-66 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YE2260 7434d820e080dadd0923362ea10b1501 616 Gene3D G3DSA:3.90.226.10 30 175 9.9E-66 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YE2260 7434d820e080dadd0923362ea10b1501 616 Gene3D G3DSA:3.90.226.10 218 314 9.9E-66 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YE2260 7434d820e080dadd0923362ea10b1501 616 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 326 539 5.0E-51 T 22-04-2016 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 YE2260 7434d820e080dadd0923362ea10b1501 616 PIRSF PIRSF001217 8 616 9.3E-217 T 22-04-2016 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 YE2260 7434d820e080dadd0923362ea10b1501 616 SUPERFAMILY SSF52096 210 286 1.33E-28 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YE2260 7434d820e080dadd0923362ea10b1501 616 SUPERFAMILY SSF52096 34 179 1.33E-28 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YE2260 7434d820e080dadd0923362ea10b1501 616 SUPERFAMILY SSF52096 466 528 2.6E-41 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YE2260 7434d820e080dadd0923362ea10b1501 616 SUPERFAMILY SSF52096 316 438 2.6E-41 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YE1824 e1df903a42db54742e2d715576a17305 327 Pfam PF03237 Terminase-like family 3 310 4.4E-28 T 22-04-2016 IPR004921 Terminase, large subunit YE0279 7d268b38a2610bbc42cc2ad020dd387f 127 PRINTS PR01650 Bacterial translocase SecE signature 44 65 1.8E-38 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 YE0279 7d268b38a2610bbc42cc2ad020dd387f 127 PRINTS PR01650 Bacterial translocase SecE signature 65 85 1.8E-38 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 YE0279 7d268b38a2610bbc42cc2ad020dd387f 127 PRINTS PR01650 Bacterial translocase SecE signature 89 109 1.8E-38 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 YE0279 7d268b38a2610bbc42cc2ad020dd387f 127 PRINTS PR01650 Bacterial translocase SecE signature 109 125 1.8E-38 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 YE0279 7d268b38a2610bbc42cc2ad020dd387f 127 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 70 122 3.5E-20 T 22-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 YE0279 7d268b38a2610bbc42cc2ad020dd387f 127 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 69 123 4.1E-17 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 YE0279 7d268b38a2610bbc42cc2ad020dd387f 127 PANTHER PTHR33910 1 126 5.4E-35 T 22-04-2016 YE0279 7d268b38a2610bbc42cc2ad020dd387f 127 Gene3D G3DSA:1.20.5.1030 64 123 3.1E-25 T 22-04-2016 YE0279 7d268b38a2610bbc42cc2ad020dd387f 127 PANTHER PTHR33910:SF1 1 126 5.4E-35 T 22-04-2016 YE0279 7d268b38a2610bbc42cc2ad020dd387f 127 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 71 99 - T 22-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 YE0279 7d268b38a2610bbc42cc2ad020dd387f 127 Hamap MF_00422 Protein translocase subunit SecE [secE]. 67 121 13.188 T 22-04-2016 IPR022943 Preprotein translocase subunit SecE YE0622 eb9f10f1ded7b4d3e2faa3e5c62eec86 1077 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1068 13.334 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YE0622 eb9f10f1ded7b4d3e2faa3e5c62eec86 1077 Gene3D G3DSA:1.10.1030.10 400 538 1.3E-51 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YE0622 eb9f10f1ded7b4d3e2faa3e5c62eec86 1077 SUPERFAMILY SSF52335 939 1071 1.26E-34 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain YE0622 eb9f10f1ded7b4d3e2faa3e5c62eec86 1077 SUPERFAMILY SSF48108 396 554 2.88E-53 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YE0622 eb9f10f1ded7b4d3e2faa3e5c62eec86 1077 SUPERFAMILY SSF56059 674 934 6.36E-104 T 22-04-2016 YE0622 eb9f10f1ded7b4d3e2faa3e5c62eec86 1077 Pfam PF02142 MGS-like domain 957 1041 4.5E-18 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain YE0622 eb9f10f1ded7b4d3e2faa3e5c62eec86 1077 Gene3D G3DSA:3.30.1490.20 141 199 4.4E-28 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 YE0622 eb9f10f1ded7b4d3e2faa3e5c62eec86 1077 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1053 0.0 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YE0622 eb9f10f1ded7b4d3e2faa3e5c62eec86 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 6.5E-64 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YE0622 eb9f10f1ded7b4d3e2faa3e5c62eec86 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 6.5E-64 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YE0622 eb9f10f1ded7b4d3e2faa3e5c62eec86 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 6.5E-64 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YE0622 eb9f10f1ded7b4d3e2faa3e5c62eec86 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 6.5E-64 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YE0622 eb9f10f1ded7b4d3e2faa3e5c62eec86 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 6.5E-64 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YE0622 eb9f10f1ded7b4d3e2faa3e5c62eec86 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 6.5E-64 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YE0622 eb9f10f1ded7b4d3e2faa3e5c62eec86 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 6.5E-64 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YE0622 eb9f10f1ded7b4d3e2faa3e5c62eec86 1077 Gene3D G3DSA:3.40.50.20 539 663 8.3E-62 T 22-04-2016 IPR016185 Pre-ATP-grasp domain YE0622 eb9f10f1ded7b4d3e2faa3e5c62eec86 1077 Gene3D G3DSA:3.40.50.1380 939 1072 8.5E-40 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain YE0622 eb9f10f1ded7b4d3e2faa3e5c62eec86 1077 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 1.4E-39 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YE0622 eb9f10f1ded7b4d3e2faa3e5c62eec86 1077 Gene3D G3DSA:3.30.470.20 200 399 4.3E-75 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 YE0622 eb9f10f1ded7b4d3e2faa3e5c62eec86 1077 Gene3D G3DSA:3.30.470.20 746 933 3.4E-80 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 YE0622 eb9f10f1ded7b4d3e2faa3e5c62eec86 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 674 876 2.4E-37 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 YE0622 eb9f10f1ded7b4d3e2faa3e5c62eec86 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 1.3E-76 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 YE0622 eb9f10f1ded7b4d3e2faa3e5c62eec86 1077 SMART SM01096 424 547 2.4E-74 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YE0622 eb9f10f1ded7b4d3e2faa3e5c62eec86 1077 SUPERFAMILY SSF52440 1 127 5.75E-50 T 22-04-2016 IPR016185 Pre-ATP-grasp domain YE0622 eb9f10f1ded7b4d3e2faa3e5c62eec86 1077 PANTHER PTHR11405 1 1073 0.0 T 22-04-2016 YE0622 eb9f10f1ded7b4d3e2faa3e5c62eec86 1077 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1063 13.139 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 YE0622 eb9f10f1ded7b4d3e2faa3e5c62eec86 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 839 846 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 YE0622 eb9f10f1ded7b4d3e2faa3e5c62eec86 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 YE0622 eb9f10f1ded7b4d3e2faa3e5c62eec86 1077 SUPERFAMILY SSF56059 128 401 4.42E-109 T 22-04-2016 YE0622 eb9f10f1ded7b4d3e2faa3e5c62eec86 1077 Gene3D G3DSA:3.30.1490.20 687 745 1.3E-24 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 YE0622 eb9f10f1ded7b4d3e2faa3e5c62eec86 1077 PANTHER PTHR11405:SF5 1 1073 0.0 T 22-04-2016 YE0622 eb9f10f1ded7b4d3e2faa3e5c62eec86 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 YE0622 eb9f10f1ded7b4d3e2faa3e5c62eec86 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 710 724 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 YE0622 eb9f10f1ded7b4d3e2faa3e5c62eec86 1077 Gene3D G3DSA:3.40.50.20 3 108 1.2E-46 T 22-04-2016 IPR016185 Pre-ATP-grasp domain YE0622 eb9f10f1ded7b4d3e2faa3e5c62eec86 1077 SUPERFAMILY SSF52440 558 676 2.16E-48 T 22-04-2016 IPR016185 Pre-ATP-grasp domain YE0622 eb9f10f1ded7b4d3e2faa3e5c62eec86 1077 SMART SM00851 956 1042 1.3E-30 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain YE3092 e50ee0b8ced18911cb964c38b9a13adf 110 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 106 2.9E-41 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family YE3092 e50ee0b8ced18911cb964c38b9a13adf 110 PANTHER PTHR33449:SF1 1 110 1.1E-54 T 22-04-2016 YE3092 e50ee0b8ced18911cb964c38b9a13adf 110 Pfam PF02575 YbaB/EbfC DNA-binding family 11 100 1.5E-35 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family YE3092 e50ee0b8ced18911cb964c38b9a13adf 110 SUPERFAMILY SSF82607 11 104 5.62E-35 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family YE3092 e50ee0b8ced18911cb964c38b9a13adf 110 PIRSF PIRSF004555 3 110 6.0E-39 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family YE3092 e50ee0b8ced18911cb964c38b9a13adf 110 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 99 22.868 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family YE3092 e50ee0b8ced18911cb964c38b9a13adf 110 PANTHER PTHR33449 1 110 1.1E-54 T 22-04-2016 YE3092 e50ee0b8ced18911cb964c38b9a13adf 110 Gene3D G3DSA:3.30.1310.10 1 110 3.3E-50 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family YE0747 17caeb7d7ff070539c3143071347e959 431 PANTHER PTHR11902 1 427 7.0E-274 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 YE0747 17caeb7d7ff070539c3143071347e959 431 Hamap MF_00318 Enolase [eno]. 2 416 44.217 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 YE0747 17caeb7d7ff070539c3143071347e959 431 PRINTS PR00148 Enolase signature 165 178 1.2E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 YE0747 17caeb7d7ff070539c3143071347e959 431 PRINTS PR00148 Enolase signature 368 385 1.2E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 YE0747 17caeb7d7ff070539c3143071347e959 431 PRINTS PR00148 Enolase signature 339 353 1.2E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 YE0747 17caeb7d7ff070539c3143071347e959 431 PRINTS PR00148 Enolase signature 37 51 1.2E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 YE0747 17caeb7d7ff070539c3143071347e959 431 PRINTS PR00148 Enolase signature 107 123 1.2E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 YE0747 17caeb7d7ff070539c3143071347e959 431 PRINTS PR00148 Enolase signature 316 327 1.2E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 YE0747 17caeb7d7ff070539c3143071347e959 431 Gene3D G3DSA:3.20.20.120 128 428 9.2E-136 T 22-04-2016 IPR029065 Enolase C-terminal domain-like YE0747 17caeb7d7ff070539c3143071347e959 431 Pfam PF03952 Enolase, N-terminal domain 4 134 2.0E-58 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 YE0747 17caeb7d7ff070539c3143071347e959 431 PIRSF PIRSF001400 1 429 1.4E-191 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 YE0747 17caeb7d7ff070539c3143071347e959 431 SUPERFAMILY SSF54826 3 138 3.16E-56 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YE0747 17caeb7d7ff070539c3143071347e959 431 SUPERFAMILY SSF51604 143 427 3.54E-127 T 22-04-2016 IPR029065 Enolase C-terminal domain-like YE0747 17caeb7d7ff070539c3143071347e959 431 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 429 1.1E-139 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 YE0747 17caeb7d7ff070539c3143071347e959 431 Gene3D G3DSA:3.30.390.10 3 126 1.2E-54 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YE0747 17caeb7d7ff070539c3143071347e959 431 ProSitePatterns PS00164 Enolase signature. 339 352 - T 22-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 YE0747 17caeb7d7ff070539c3143071347e959 431 SMART SM01193 4 134 5.3E-93 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 YE0747 17caeb7d7ff070539c3143071347e959 431 SMART SM01192 143 430 1.8E-212 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 YE0747 17caeb7d7ff070539c3143071347e959 431 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 428 1.1E-205 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 YE1438 7a7321e43d143f73f314b62be5094d94 490 PRINTS PR00084 Mannitol dehydrogenase signature 248 263 7.5E-22 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YE1438 7a7321e43d143f73f314b62be5094d94 490 PRINTS PR00084 Mannitol dehydrogenase signature 218 231 7.5E-22 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YE1438 7a7321e43d143f73f314b62be5094d94 490 PRINTS PR00084 Mannitol dehydrogenase signature 179 192 7.5E-22 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YE1438 7a7321e43d143f73f314b62be5094d94 490 PRINTS PR00084 Mannitol dehydrogenase signature 27 37 7.5E-22 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YE1438 7a7321e43d143f73f314b62be5094d94 490 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 26 188 1.5E-43 T 22-04-2016 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 YE1438 7a7321e43d143f73f314b62be5094d94 490 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 216 463 4.8E-96 T 22-04-2016 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 YE1438 7a7321e43d143f73f314b62be5094d94 490 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 218 230 - T 22-04-2016 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 YE1438 7a7321e43d143f73f314b62be5094d94 490 PANTHER PTHR30562:SF7 1 488 0.0 T 22-04-2016 YE1438 7a7321e43d143f73f314b62be5094d94 490 Gene3D G3DSA:1.10.1040.10 282 487 4.8E-76 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 YE1438 7a7321e43d143f73f314b62be5094d94 490 SUPERFAMILY SSF48179 283 487 4.42E-66 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 YE1438 7a7321e43d143f73f314b62be5094d94 490 SUPERFAMILY SSF51735 3 282 1.18E-95 T 22-04-2016 IPR016040 NAD(P)-binding domain YE1438 7a7321e43d143f73f314b62be5094d94 490 Gene3D G3DSA:3.40.50.720 6 281 2.3E-109 T 22-04-2016 IPR016040 NAD(P)-binding domain YE1438 7a7321e43d143f73f314b62be5094d94 490 PANTHER PTHR30562 1 488 0.0 T 22-04-2016 YE1716 d2d690064919a621131dd098edc81019 373 SUPERFAMILY SSF51197 7 289 1.18E-74 T 22-04-2016 YE1716 d2d690064919a621131dd098edc81019 373 SMART SM00558 87 215 1.1E-9 T 22-04-2016 IPR003347 JmjC domain YE1716 d2d690064919a621131dd098edc81019 373 Gene3D G3DSA:2.60.120.650 7 205 3.7E-43 T 22-04-2016 YE1716 d2d690064919a621131dd098edc81019 373 Pfam PF08007 Cupin superfamily protein 10 310 1.0E-101 T 22-04-2016 IPR003347 JmjC domain YE1716 d2d690064919a621131dd098edc81019 373 PANTHER PTHR13096 7 335 4.9E-76 T 22-04-2016 YE2956 85c464e880ec0e40c732480fadba5c3c 321 PANTHER PTHR28283 3 321 9.0E-123 T 22-04-2016 YE2956 85c464e880ec0e40c732480fadba5c3c 321 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 91 109 1.2E-29 T 22-04-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 YE2956 85c464e880ec0e40c732480fadba5c3c 321 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 272 283 1.2E-29 T 22-04-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 YE2956 85c464e880ec0e40c732480fadba5c3c 321 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 118 139 1.2E-29 T 22-04-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 YE2956 85c464e880ec0e40c732480fadba5c3c 321 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 227 238 1.2E-29 T 22-04-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 YE2956 85c464e880ec0e40c732480fadba5c3c 321 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 246 259 1.2E-29 T 22-04-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 YE2956 85c464e880ec0e40c732480fadba5c3c 321 ProSitePatterns PS00607 cAMP phosphodiesterases class-II signature. 95 109 - T 22-04-2016 IPR024225 Cyclic-AMP phosphodiesterase class-II, conserved site GO:0008081 YE2956 85c464e880ec0e40c732480fadba5c3c 321 SUPERFAMILY SSF56281 19 288 7.85E-22 T 22-04-2016 IPR001279 Metallo-beta-lactamase YE2956 85c464e880ec0e40c732480fadba5c3c 321 PIRSF PIRSF000962 2 321 6.1E-121 T 22-04-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 YE2956 85c464e880ec0e40c732480fadba5c3c 321 Pfam PF02112 cAMP phosphodiesterases class-II 18 316 7.0E-55 T 22-04-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 YE2956 85c464e880ec0e40c732480fadba5c3c 321 Gene3D G3DSA:3.60.15.10 25 283 1.6E-27 T 22-04-2016 IPR001279 Metallo-beta-lactamase YE2956 85c464e880ec0e40c732480fadba5c3c 321 PANTHER PTHR28283:SF1 3 321 9.0E-123 T 22-04-2016 YE0106 a6dea691dc14e3627708eb8b1a54eff1 287 PANTHER PTHR11064:SF39 78 287 2.6E-58 T 22-04-2016 YE0106 a6dea691dc14e3627708eb8b1a54eff1 287 Pfam PF05036 Sporulation related domain 213 281 7.3E-20 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 YE0106 a6dea691dc14e3627708eb8b1a54eff1 287 SUPERFAMILY SSF110997 213 282 2.62E-21 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 YE0106 a6dea691dc14e3627708eb8b1a54eff1 287 Gene3D G3DSA:3.30.70.1070 208 283 1.1E-29 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 YE0106 a6dea691dc14e3627708eb8b1a54eff1 287 PANTHER PTHR11064 78 287 2.6E-58 T 22-04-2016 YE0106 a6dea691dc14e3627708eb8b1a54eff1 287 Hamap MF_02039 Cell division protein FtsN [ftsN]. 33 287 37.576 T 22-04-2016 IPR011930 Cell division protein FtsN GO:0005515 YE0106 a6dea691dc14e3627708eb8b1a54eff1 287 TIGRFAM TIGR02223 ftsN: cell division protein FtsN 2 281 3.7E-78 T 22-04-2016 IPR011930 Cell division protein FtsN GO:0005515 YE2124 91a6782f0ff53e7159b6a1db413f4050 275 SUPERFAMILY SSF56399 23 250 5.9E-70 T 22-04-2016 YE2124 91a6782f0ff53e7159b6a1db413f4050 275 Gene3D G3DSA:3.90.210.10 22 253 5.1E-71 T 22-04-2016 YE2124 91a6782f0ff53e7159b6a1db413f4050 275 PRINTS PR01395 Bordetella pertussis toxin A subunit signature 97 118 1.4E-8 T 22-04-2016 IPR003898 Bordetella pertussis toxin A GO:0003950|GO:0005576|GO:0009405 YE2124 91a6782f0ff53e7159b6a1db413f4050 275 PRINTS PR01395 Bordetella pertussis toxin A subunit signature 22 45 1.4E-8 T 22-04-2016 IPR003898 Bordetella pertussis toxin A GO:0003950|GO:0005576|GO:0009405 YE2124 91a6782f0ff53e7159b6a1db413f4050 275 PRINTS PR01395 Bordetella pertussis toxin A subunit signature 174 198 1.4E-8 T 22-04-2016 IPR003898 Bordetella pertussis toxin A GO:0003950|GO:0005576|GO:0009405 YE2124 91a6782f0ff53e7159b6a1db413f4050 275 Pfam PF02917 Pertussis toxin, subunit 1 24 207 6.7E-17 T 22-04-2016 IPR003898 Bordetella pertussis toxin A GO:0003950|GO:0005576|GO:0009405 YE0636 ea7c5b1de5c05c88d206a4e0611084ed 968 SUPERFAMILY SSF52540 125 378 5.2E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0636 ea7c5b1de5c05c88d206a4e0611084ed 968 PANTHER PTHR10799 892 968 2.0E-264 T 22-04-2016 YE0636 ea7c5b1de5c05c88d206a4e0611084ed 968 PANTHER PTHR10799 150 354 2.0E-264 T 22-04-2016 YE0636 ea7c5b1de5c05c88d206a4e0611084ed 968 PANTHER PTHR10799 399 694 2.0E-264 T 22-04-2016 YE0636 ea7c5b1de5c05c88d206a4e0611084ed 968 PANTHER PTHR10799 799 840 2.0E-264 T 22-04-2016 YE0636 ea7c5b1de5c05c88d206a4e0611084ed 968 SMART SM00487 150 342 5.4E-21 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain YE0636 ea7c5b1de5c05c88d206a4e0611084ed 968 Pfam PF00176 SNF2 family N-terminal domain 174 441 8.7E-20 T 22-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 YE0636 ea7c5b1de5c05c88d206a4e0611084ed 968 Gene3D G3DSA:3.40.50.300 154 322 1.1E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0636 ea7c5b1de5c05c88d206a4e0611084ed 968 SUPERFAMILY SSF52540 480 643 1.95E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0636 ea7c5b1de5c05c88d206a4e0611084ed 968 SUPERFAMILY SSF52540 273 337 1.95E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0636 ea7c5b1de5c05c88d206a4e0611084ed 968 SMART SM00490 517 601 4.9E-15 T 22-04-2016 IPR001650 Helicase, C-terminal YE0636 ea7c5b1de5c05c88d206a4e0611084ed 968 Pfam PF12137 RNA polymerase recycling family C-terminal 605 965 2.6E-156 T 22-04-2016 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 YE0636 ea7c5b1de5c05c88d206a4e0611084ed 968 Pfam PF00271 Helicase conserved C-terminal domain 492 601 4.6E-14 T 22-04-2016 IPR001650 Helicase, C-terminal YE0636 ea7c5b1de5c05c88d206a4e0611084ed 968 PANTHER PTHR10799:SF610 892 968 2.0E-264 T 22-04-2016 YE0636 ea7c5b1de5c05c88d206a4e0611084ed 968 PANTHER PTHR10799:SF610 150 354 2.0E-264 T 22-04-2016 YE0636 ea7c5b1de5c05c88d206a4e0611084ed 968 PANTHER PTHR10799:SF610 399 694 2.0E-264 T 22-04-2016 YE0636 ea7c5b1de5c05c88d206a4e0611084ed 968 PANTHER PTHR10799:SF610 799 840 2.0E-264 T 22-04-2016 YE0636 ea7c5b1de5c05c88d206a4e0611084ed 968 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 966 71.191 T 22-04-2016 IPR023949 RNA polymerase-associated protein RapA GO:0006355 YE0636 ea7c5b1de5c05c88d206a4e0611084ed 968 Gene3D G3DSA:3.40.50.300 483 624 6.4E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3939 c3d1ce86baa8f941ec0d93bc381b7fcd 73 Gene3D G3DSA:3.30.50.10 18 51 1.4E-4 T 22-04-2016 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 YE3939 c3d1ce86baa8f941ec0d93bc381b7fcd 73 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 9 67 3.0E-30 T 22-04-2016 IPR012658 Conserved hypothetical protein CHP02443 YE3939 c3d1ce86baa8f941ec0d93bc381b7fcd 73 Pfam PF09526 Probable metal-binding protein (DUF2387) 10 59 8.9E-20 T 22-04-2016 IPR012658 Conserved hypothetical protein CHP02443 YE3232 5b2bb01475d28788947f58ee0c971c32 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 164 184 2.3E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YE3232 5b2bb01475d28788947f58ee0c971c32 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 114 127 2.3E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YE3232 5b2bb01475d28788947f58ee0c971c32 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 191 204 2.3E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YE3232 5b2bb01475d28788947f58ee0c971c32 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 2.3E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YE3232 5b2bb01475d28788947f58ee0c971c32 229 TIGRFAM TIGR01691 enolase-ppase: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 2 221 4.9E-88 T 22-04-2016 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|UniPathway: UPA00904|UniPathway: UPA00904 YE3232 5b2bb01475d28788947f58ee0c971c32 229 Gene3D G3DSA:3.40.50.1000 1 212 8.1E-21 T 22-04-2016 IPR023214 HAD-like domain YE3232 5b2bb01475d28788947f58ee0c971c32 229 SUPERFAMILY SSF56784 1 221 3.57E-56 T 22-04-2016 IPR023214 HAD-like domain YE3232 5b2bb01475d28788947f58ee0c971c32 229 Hamap MF_01681 Enolase-phosphatase E1 [mtnC]. 1 222 41.461 T 22-04-2016 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|UniPathway: UPA00904|UniPathway: UPA00904 YE3232 5b2bb01475d28788947f58ee0c971c32 229 PANTHER PTHR20371 2 227 3.8E-91 T 22-04-2016 YE2655 460e45095af53e9e233e2d4282c226c1 228 SUPERFAMILY SSF52172 4 158 3.13E-32 T 22-04-2016 IPR011006 CheY-like superfamily YE2655 460e45095af53e9e233e2d4282c226c1 228 PIRSF PIRSF006171 2 227 1.2E-74 T 22-04-2016 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0001071|GO:0003677|GO:0005737|GO:0009605 YE2655 460e45095af53e9e233e2d4282c226c1 228 PANTHER PTHR26402 4 212 9.9E-74 T 22-04-2016 YE2655 460e45095af53e9e233e2d4282c226c1 228 Pfam PF00072 Response regulator receiver domain 6 117 4.7E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE2655 460e45095af53e9e233e2d4282c226c1 228 Gene3D G3DSA:3.40.50.2300 3 129 5.1E-29 T 22-04-2016 YE2655 460e45095af53e9e233e2d4282c226c1 228 Gene3D G3DSA:1.10.10.10 168 197 8.8E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2655 460e45095af53e9e233e2d4282c226c1 228 Pfam PF12431 Transcriptional regulator 133 161 4.1E-8 T 22-04-2016 IPR028141 Transcriptional regulator YE2655 460e45095af53e9e233e2d4282c226c1 228 SMART SM00448 4 117 3.3E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE2655 460e45095af53e9e233e2d4282c226c1 228 PANTHER PTHR26402:SF550 4 212 9.9E-74 T 22-04-2016 YE2941 44df0319653f350e29eeb33a2a6d135f 292 Pfam PF02629 CoA binding domain 6 99 1.8E-32 T 22-04-2016 IPR003781 CoA-binding GO:0048037 YE2941 44df0319653f350e29eeb33a2a6d135f 292 SMART SM00881 4 100 6.1E-39 T 22-04-2016 IPR003781 CoA-binding GO:0048037 YE2941 44df0319653f350e29eeb33a2a6d135f 292 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 22-04-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site YE2941 44df0319653f350e29eeb33a2a6d135f 292 PIRSF PIRSF001553 1 291 1.1E-134 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 YE2941 44df0319653f350e29eeb33a2a6d135f 292 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.1E-40 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 YE2941 44df0319653f350e29eeb33a2a6d135f 292 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.1E-40 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 YE2941 44df0319653f350e29eeb33a2a6d135f 292 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.1E-40 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 YE2941 44df0319653f350e29eeb33a2a6d135f 292 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.1E-40 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 YE2941 44df0319653f350e29eeb33a2a6d135f 292 PANTHER PTHR11117 1 289 9.0E-199 T 22-04-2016 YE2941 44df0319653f350e29eeb33a2a6d135f 292 Gene3D G3DSA:3.40.50.261 119 287 2.7E-77 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 YE2941 44df0319653f350e29eeb33a2a6d135f 292 Pfam PF00549 CoA-ligase 151 271 3.9E-21 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 YE2941 44df0319653f350e29eeb33a2a6d135f 292 SUPERFAMILY SSF52210 123 288 1.11E-56 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 YE2941 44df0319653f350e29eeb33a2a6d135f 292 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 287 4.3E-146 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 YE2941 44df0319653f350e29eeb33a2a6d135f 292 Gene3D G3DSA:3.40.50.720 2 118 2.8E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2941 44df0319653f350e29eeb33a2a6d135f 292 SUPERFAMILY SSF51735 1 122 4.22E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2941 44df0319653f350e29eeb33a2a6d135f 292 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 YE2950 7b8ffb2c42db708e1488b172b062c766 215 PANTHER PTHR23402:SF1 1 214 9.4E-73 T 22-04-2016 YE2950 7b8ffb2c42db708e1488b172b062c766 215 ProSitePatterns PS01333 Pyrrolidone-carboxylate peptidase glutamic acid active site. 69 85 - T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 YE2950 7b8ffb2c42db708e1488b172b062c766 215 Gene3D G3DSA:3.40.630.20 2 208 2.2E-71 T 22-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like YE2950 7b8ffb2c42db708e1488b172b062c766 215 PANTHER PTHR23402 1 214 9.4E-73 T 22-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like YE2950 7b8ffb2c42db708e1488b172b062c766 215 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 130 144 - T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 YE2950 7b8ffb2c42db708e1488b172b062c766 215 SUPERFAMILY SSF53182 1 215 3.79E-76 T 22-04-2016 YE2950 7b8ffb2c42db708e1488b172b062c766 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 162 174 2.0E-47 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 YE2950 7b8ffb2c42db708e1488b172b062c766 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 132 148 2.0E-47 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 YE2950 7b8ffb2c42db708e1488b172b062c766 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 80 100 2.0E-47 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 YE2950 7b8ffb2c42db708e1488b172b062c766 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 62 74 2.0E-47 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 YE2950 7b8ffb2c42db708e1488b172b062c766 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 4 27 2.0E-47 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 YE2950 7b8ffb2c42db708e1488b172b062c766 215 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 2 201 42.157 T 22-04-2016 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 YE2950 7b8ffb2c42db708e1488b172b062c766 215 PIRSF PIRSF015592 1 213 4.4E-90 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 YE2950 7b8ffb2c42db708e1488b172b062c766 215 Pfam PF01470 Pyroglutamyl peptidase 3 202 1.0E-83 T 22-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like YE2950 7b8ffb2c42db708e1488b172b062c766 215 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 4 214 9.0E-92 T 22-04-2016 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 YE2225 15fec86004030f552f90ea1a773cd200 240 PANTHER PTHR33121 10 220 4.1E-59 T 22-04-2016 YE2225 15fec86004030f552f90ea1a773cd200 240 PANTHER PTHR33121:SF6 10 220 4.1E-59 T 22-04-2016 YE2225 15fec86004030f552f90ea1a773cd200 240 SUPERFAMILY SSF141868 16 221 7.85E-25 T 22-04-2016 IPR001633 EAL domain YE2225 15fec86004030f552f90ea1a773cd200 240 Gene3D G3DSA:3.20.20.450 16 229 1.5E-20 T 22-04-2016 IPR001633 EAL domain YE2225 15fec86004030f552f90ea1a773cd200 240 SMART SM00052 3 228 2.3E-5 T 22-04-2016 IPR001633 EAL domain YE2225 15fec86004030f552f90ea1a773cd200 240 Pfam PF00563 EAL domain 16 220 7.2E-19 T 22-04-2016 IPR001633 EAL domain YE2409 0ba1d51b34591cdbf7a44b6905d81783 511 PANTHER PTHR11206:SF90 217 442 1.3E-100 T 22-04-2016 YE2409 0ba1d51b34591cdbf7a44b6905d81783 511 PANTHER PTHR11206:SF90 70 82 1.3E-100 T 22-04-2016 YE2409 0ba1d51b34591cdbf7a44b6905d81783 511 PANTHER PTHR11206:SF90 466 499 1.3E-100 T 22-04-2016 YE2409 0ba1d51b34591cdbf7a44b6905d81783 511 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 506 2.0E-166 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ YE2409 0ba1d51b34591cdbf7a44b6905d81783 511 PIRSF PIRSF002869 1 511 9.6E-179 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ YE2409 0ba1d51b34591cdbf7a44b6905d81783 511 Pfam PF03023 MviN-like protein 28 477 5.7E-154 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ YE2409 0ba1d51b34591cdbf7a44b6905d81783 511 PRINTS PR01806 Virulence factor MviN signature 52 68 1.6E-86 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ YE2409 0ba1d51b34591cdbf7a44b6905d81783 511 PRINTS PR01806 Virulence factor MviN signature 409 426 1.6E-86 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ YE2409 0ba1d51b34591cdbf7a44b6905d81783 511 PRINTS PR01806 Virulence factor MviN signature 157 178 1.6E-86 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ YE2409 0ba1d51b34591cdbf7a44b6905d81783 511 PRINTS PR01806 Virulence factor MviN signature 133 157 1.6E-86 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ YE2409 0ba1d51b34591cdbf7a44b6905d81783 511 PRINTS PR01806 Virulence factor MviN signature 357 376 1.6E-86 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ YE2409 0ba1d51b34591cdbf7a44b6905d81783 511 PRINTS PR01806 Virulence factor MviN signature 259 285 1.6E-86 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ YE2409 0ba1d51b34591cdbf7a44b6905d81783 511 PRINTS PR01806 Virulence factor MviN signature 33 52 1.6E-86 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ YE2409 0ba1d51b34591cdbf7a44b6905d81783 511 PANTHER PTHR11206 217 442 1.3E-100 T 22-04-2016 YE2409 0ba1d51b34591cdbf7a44b6905d81783 511 PANTHER PTHR11206 70 82 1.3E-100 T 22-04-2016 YE2409 0ba1d51b34591cdbf7a44b6905d81783 511 PANTHER PTHR11206 466 499 1.3E-100 T 22-04-2016 YE0617 8704c7fcf56b21d74f66c794953cd0b7 169 Pfam PF01252 Signal peptidase (SPase) II 16 154 2.8E-37 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 YE0617 8704c7fcf56b21d74f66c794953cd0b7 169 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 7 162 17.439 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 YE0617 8704c7fcf56b21d74f66c794953cd0b7 169 TIGRFAM TIGR00077 lspA: signal peptidase II 2 161 9.6E-53 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 YE0617 8704c7fcf56b21d74f66c794953cd0b7 169 ProSitePatterns PS00855 Signal peptidases II signature. 104 116 - T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 YE0617 8704c7fcf56b21d74f66c794953cd0b7 169 PANTHER PTHR33695:SF1 9 169 6.0E-63 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 YE0617 8704c7fcf56b21d74f66c794953cd0b7 169 PANTHER PTHR33695 9 169 6.0E-63 T 22-04-2016 YE0617 8704c7fcf56b21d74f66c794953cd0b7 169 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 53 61 1.3E-18 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 YE0617 8704c7fcf56b21d74f66c794953cd0b7 169 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 137 153 1.3E-18 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 YE0617 8704c7fcf56b21d74f66c794953cd0b7 169 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 101 116 1.3E-18 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 YE0355 4edabfa6f1db45e6895d3743a625ca65 112 Pfam PF13698 Domain of unknown function (DUF4156) 22 111 2.5E-31 T 22-04-2016 IPR025294 Protein of unknown function DUF4156 YE0389 97afd666bf946996643045ebce040d1e 95 Gene3D G3DSA:3.30.1660.10 28 95 2.8E-18 T 22-04-2016 IPR025543 Dodecin-like YE0389 97afd666bf946996643045ebce040d1e 95 PANTHER PTHR34156 6 95 1.5E-21 T 22-04-2016 YE0389 97afd666bf946996643045ebce040d1e 95 Pfam PF07338 Protein of unknown function (DUF1471) 41 95 1.7E-17 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 YE0389 97afd666bf946996643045ebce040d1e 95 SUPERFAMILY SSF159871 5 95 4.58E-24 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 YE1681 c92d94530509a69b6a86b2693774d42e 452 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 85 97 - T 22-04-2016 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37 YE1681 c92d94530509a69b6a86b2693774d42e 452 Pfam PF00145 C-5 cytosine-specific DNA methylase 1 427 1.9E-51 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE1681 c92d94530509a69b6a86b2693774d42e 452 PANTHER PTHR10629:SF32 3 450 3.5E-58 T 22-04-2016 YE1681 c92d94530509a69b6a86b2693774d42e 452 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 3 427 1.2E-41 T 22-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 YE1681 c92d94530509a69b6a86b2693774d42e 452 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 415 433 - T 22-04-2016 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 YE1681 c92d94530509a69b6a86b2693774d42e 452 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 123 137 3.0E-15 T 22-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 YE1681 c92d94530509a69b6a86b2693774d42e 452 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 173 186 3.0E-15 T 22-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 YE1681 c92d94530509a69b6a86b2693774d42e 452 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 2 18 3.0E-15 T 22-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 YE1681 c92d94530509a69b6a86b2693774d42e 452 PANTHER PTHR10629 3 450 3.5E-58 T 22-04-2016 YE1681 c92d94530509a69b6a86b2693774d42e 452 SUPERFAMILY SSF53335 342 434 7.39E-66 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE1681 c92d94530509a69b6a86b2693774d42e 452 SUPERFAMILY SSF53335 233 257 7.39E-66 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE1681 c92d94530509a69b6a86b2693774d42e 452 SUPERFAMILY SSF53335 1 193 7.39E-66 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE1681 c92d94530509a69b6a86b2693774d42e 452 Gene3D G3DSA:3.40.50.150 1 179 4.1E-40 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE1681 c92d94530509a69b6a86b2693774d42e 452 Gene3D G3DSA:3.90.120.10 343 423 4.8E-28 T 22-04-2016 YE1681 c92d94530509a69b6a86b2693774d42e 452 Gene3D G3DSA:3.90.120.10 285 286 4.8E-28 T 22-04-2016 YE1681 c92d94530509a69b6a86b2693774d42e 452 Gene3D G3DSA:3.90.120.10 180 245 4.8E-28 T 22-04-2016 YE3720 214fd56215ee0c4ff10d9a72989c1e1a 298 Gene3D G3DSA:1.10.10.10 7 92 4.3E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3720 214fd56215ee0c4ff10d9a72989c1e1a 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 5.0E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE3720 214fd56215ee0c4ff10d9a72989c1e1a 298 SUPERFAMILY SSF46785 8 91 2.07E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3720 214fd56215ee0c4ff10d9a72989c1e1a 298 SUPERFAMILY SSF53850 93 288 5.12E-22 T 22-04-2016 YE3720 214fd56215ee0c4ff10d9a72989c1e1a 298 Pfam PF03466 LysR substrate binding domain 114 280 6.1E-18 T 22-04-2016 IPR005119 LysR, substrate-binding YE3720 214fd56215ee0c4ff10d9a72989c1e1a 298 Gene3D G3DSA:3.40.190.10 124 181 1.3E-4 T 22-04-2016 YE3720 214fd56215ee0c4ff10d9a72989c1e1a 298 PANTHER PTHR30126:SF22 6 295 3.6E-213 T 22-04-2016 YE3720 214fd56215ee0c4ff10d9a72989c1e1a 298 PANTHER PTHR30126 6 295 3.6E-213 T 22-04-2016 YE3720 214fd56215ee0c4ff10d9a72989c1e1a 298 Gene3D G3DSA:3.40.190.10 182 265 9.4E-10 T 22-04-2016 YE0702 bf8d2509aedcabe594dc688618c464e4 475 Gene3D G3DSA:3.30.390.30 343 459 7.0E-44 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 YE0702 bf8d2509aedcabe594dc688618c464e4 475 Gene3D G3DSA:3.50.50.60 273 341 6.3E-64 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE0702 bf8d2509aedcabe594dc688618c464e4 475 Gene3D G3DSA:3.50.50.60 7 150 6.3E-64 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE0702 bf8d2509aedcabe594dc688618c464e4 475 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 9 329 2.5E-63 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE0702 bf8d2509aedcabe594dc688618c464e4 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 409 424 1.2E-68 T 22-04-2016 YE0702 bf8d2509aedcabe594dc688618c464e4 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 344 365 1.2E-68 T 22-04-2016 YE0702 bf8d2509aedcabe594dc688618c464e4 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 42 57 1.2E-68 T 22-04-2016 YE0702 bf8d2509aedcabe594dc688618c464e4 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 1.2E-68 T 22-04-2016 YE0702 bf8d2509aedcabe594dc688618c464e4 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 431 451 1.2E-68 T 22-04-2016 YE0702 bf8d2509aedcabe594dc688618c464e4 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 1.2E-68 T 22-04-2016 YE0702 bf8d2509aedcabe594dc688618c464e4 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 266 280 1.2E-68 T 22-04-2016 YE0702 bf8d2509aedcabe594dc688618c464e4 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 309 316 1.2E-68 T 22-04-2016 YE0702 bf8d2509aedcabe594dc688618c464e4 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 9 31 1.2E-68 T 22-04-2016 YE0702 bf8d2509aedcabe594dc688618c464e4 475 PANTHER PTHR22912:SF160 1 460 1.5E-273 T 22-04-2016 YE0702 bf8d2509aedcabe594dc688618c464e4 475 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 348 456 2.1E-35 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 YE0702 bf8d2509aedcabe594dc688618c464e4 475 PIRSF PIRSF000350 1 469 4.6E-86 T 22-04-2016 YE0702 bf8d2509aedcabe594dc688618c464e4 475 SUPERFAMILY SSF51905 1 338 1.42E-57 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE0702 bf8d2509aedcabe594dc688618c464e4 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 6.2E-41 T 22-04-2016 YE0702 bf8d2509aedcabe594dc688618c464e4 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 265 281 6.2E-41 T 22-04-2016 YE0702 bf8d2509aedcabe594dc688618c464e4 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 6.2E-41 T 22-04-2016 YE0702 bf8d2509aedcabe594dc688618c464e4 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 6.2E-41 T 22-04-2016 YE0702 bf8d2509aedcabe594dc688618c464e4 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 294 316 6.2E-41 T 22-04-2016 YE0702 bf8d2509aedcabe594dc688618c464e4 475 Gene3D G3DSA:3.50.50.60 153 272 8.1E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE0702 bf8d2509aedcabe594dc688618c464e4 475 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 8 459 2.2E-148 T 22-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 YE0702 bf8d2509aedcabe594dc688618c464e4 475 PANTHER PTHR22912 1 460 1.5E-273 T 22-04-2016 YE0702 bf8d2509aedcabe594dc688618c464e4 475 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 43 53 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 YE0702 bf8d2509aedcabe594dc688618c464e4 475 SUPERFAMILY SSF55424 344 467 5.84E-39 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 YE3960 ace4b31210ab72ef14cc8057660548c4 189 PANTHER PTHR11071 25 188 2.9E-68 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 YE3960 ace4b31210ab72ef14cc8057660548c4 189 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 30 187 3.4E-48 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 YE3960 ace4b31210ab72ef14cc8057660548c4 189 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 64 81 - T 22-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 YE3960 ace4b31210ab72ef14cc8057660548c4 189 SUPERFAMILY SSF50891 26 188 1.11E-57 T 22-04-2016 IPR029000 Cyclophilin-like domain YE3960 ace4b31210ab72ef14cc8057660548c4 189 Gene3D G3DSA:2.40.100.10 26 188 1.0E-54 T 22-04-2016 IPR029000 Cyclophilin-like domain YE3960 ace4b31210ab72ef14cc8057660548c4 189 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 43 58 5.0E-11 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 YE3960 ace4b31210ab72ef14cc8057660548c4 189 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 143 158 5.0E-11 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 YE3960 ace4b31210ab72ef14cc8057660548c4 189 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 69 81 5.0E-11 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 YE3960 ace4b31210ab72ef14cc8057660548c4 189 PANTHER PTHR11071:SF265 25 188 2.9E-68 T 22-04-2016 YE0084 fe3a684ba318551ce646c86b5c8a4acd 332 SUPERFAMILY SSF57884 1 62 8.89E-23 T 22-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 YE0084 fe3a684ba318551ce646c86b5c8a4acd 332 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 240 319 2.6E-35 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 YE0084 fe3a684ba318551ce646c86b5c8a4acd 332 Gene3D G3DSA:1.10.10.60 108 151 1.5E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE0084 fe3a684ba318551ce646c86b5c8a4acd 332 Gene3D G3DSA:3.40.10.10 1 56 4.1E-23 T 22-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 YE0084 fe3a684ba318551ce646c86b5c8a4acd 332 Gene3D G3DSA:1.10.10.60 57 107 1.2E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE0084 fe3a684ba318551ce646c86b5c8a4acd 332 PANTHER PTHR10815:SF9 128 323 5.5E-119 T 22-04-2016 YE0084 fe3a684ba318551ce646c86b5c8a4acd 332 SUPERFAMILY SSF53155 160 238 4.51E-20 T 22-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 YE0084 fe3a684ba318551ce646c86b5c8a4acd 332 Pfam PF12833 Helix-turn-helix domain 76 153 3.0E-18 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YE0084 fe3a684ba318551ce646c86b5c8a4acd 332 Gene3D G3DSA:3.30.160.70 152 238 1.8E-33 T 22-04-2016 YE0084 fe3a684ba318551ce646c86b5c8a4acd 332 PIRSF PIRSF000409 1 328 4.0E-133 T 22-04-2016 IPR016221 Bifunctional regulatory protein Ada YE0084 fe3a684ba318551ce646c86b5c8a4acd 332 Gene3D G3DSA:1.10.10.10 239 323 1.7E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0084 fe3a684ba318551ce646c86b5c8a4acd 332 SUPERFAMILY SSF46767 239 320 3.66E-30 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 YE0084 fe3a684ba318551ce646c86b5c8a4acd 332 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 163 221 6.3E-5 T 22-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 YE0084 fe3a684ba318551ce646c86b5c8a4acd 332 PANTHER PTHR10815 128 323 5.5E-119 T 22-04-2016 YE0084 fe3a684ba318551ce646c86b5c8a4acd 332 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 241 320 3.5E-32 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 YE0084 fe3a684ba318551ce646c86b5c8a4acd 332 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 290 296 - T 22-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 YE0084 fe3a684ba318551ce646c86b5c8a4acd 332 SMART SM00342 70 152 2.4E-17 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YE0084 fe3a684ba318551ce646c86b5c8a4acd 332 Pfam PF02805 Metal binding domain of Ada 1 44 2.8E-20 T 22-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 YE0084 fe3a684ba318551ce646c86b5c8a4acd 332 SUPERFAMILY SSF46689 55 102 8.69E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE1704 d87475decdec4dedba2907df85a19b44 306 Gene3D G3DSA:3.90.1200.10 96 295 5.7E-23 T 22-04-2016 YE1704 d87475decdec4dedba2907df85a19b44 306 SUPERFAMILY SSF56112 36 303 6.12E-41 T 22-04-2016 IPR011009 Protein kinase-like domain YE1704 d87475decdec4dedba2907df85a19b44 306 TIGRFAM TIGR02721 ycfN_thiK: thiamine kinase 40 302 1.2E-99 T 22-04-2016 IPR014093 Thiamine kinase GO:0006772|GO:0016310|GO:0019165 KEGG: 00730+2.7.1.89|MetaCyc: PWY-6896|UniPathway: UPA00060 YE1704 d87475decdec4dedba2907df85a19b44 306 Pfam PF01636 Phosphotransferase enzyme family 81 255 2.2E-15 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase YE3630 b79e7ff7c9c57c6081c3012bb49d9691 1043 SUPERFAMILY SSF82714 722 806 2.75E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YE3630 b79e7ff7c9c57c6081c3012bb49d9691 1043 SUPERFAMILY SSF82693 45 126 6.8E-20 T 22-04-2016 YE3630 b79e7ff7c9c57c6081c3012bb49d9691 1043 SUPERFAMILY SSF82693 137 184 1.31E-21 T 22-04-2016 YE3630 b79e7ff7c9c57c6081c3012bb49d9691 1043 SUPERFAMILY SSF82693 270 327 1.31E-21 T 22-04-2016 YE3630 b79e7ff7c9c57c6081c3012bb49d9691 1043 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1042 0.0 T 22-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 YE3630 b79e7ff7c9c57c6081c3012bb49d9691 1043 Gene3D G3DSA:3.30.2090.10 185 268 4.3E-20 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YE3630 b79e7ff7c9c57c6081c3012bb49d9691 1043 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 9.1E-26 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE3630 b79e7ff7c9c57c6081c3012bb49d9691 1043 PRINTS PR00702 Acriflavin resistance protein family signature 551 568 9.1E-26 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE3630 b79e7ff7c9c57c6081c3012bb49d9691 1043 PRINTS PR00702 Acriflavin resistance protein family signature 360 381 9.1E-26 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE3630 b79e7ff7c9c57c6081c3012bb49d9691 1043 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 9.1E-26 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE3630 b79e7ff7c9c57c6081c3012bb49d9691 1043 PRINTS PR00702 Acriflavin resistance protein family signature 388 412 9.1E-26 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE3630 b79e7ff7c9c57c6081c3012bb49d9691 1043 PRINTS PR00702 Acriflavin resistance protein family signature 333 356 9.1E-26 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE3630 b79e7ff7c9c57c6081c3012bb49d9691 1043 SUPERFAMILY SSF82866 804 1040 3.92E-48 T 22-04-2016 YE3630 b79e7ff7c9c57c6081c3012bb49d9691 1043 Gene3D G3DSA:3.30.70.1430 45 141 5.1E-24 T 22-04-2016 YE3630 b79e7ff7c9c57c6081c3012bb49d9691 1043 SUPERFAMILY SSF82866 293 504 5.36E-39 T 22-04-2016 YE3630 b79e7ff7c9c57c6081c3012bb49d9691 1043 Pfam PF00873 AcrB/AcrD/AcrF family 5 1036 5.2E-237 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE3630 b79e7ff7c9c57c6081c3012bb49d9691 1043 PANTHER PTHR32063 2 1042 0.0 T 22-04-2016 YE3630 b79e7ff7c9c57c6081c3012bb49d9691 1043 SUPERFAMILY SSF82714 185 268 7.72E-19 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YE3630 b79e7ff7c9c57c6081c3012bb49d9691 1043 Gene3D G3DSA:1.10.3850.10 276 506 4.2E-64 T 22-04-2016 YE3630 b79e7ff7c9c57c6081c3012bb49d9691 1043 Gene3D G3DSA:1.10.3850.10 815 1038 2.1E-50 T 22-04-2016 YE3630 b79e7ff7c9c57c6081c3012bb49d9691 1043 Gene3D G3DSA:3.30.2090.10 722 810 1.1E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YE3630 b79e7ff7c9c57c6081c3012bb49d9691 1043 PANTHER PTHR32063:SF19 2 1042 0.0 T 22-04-2016 YE2158 84ad1ddaaefbc0698aa46f5298119a14 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.1E-18 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE2158 84ad1ddaaefbc0698aa46f5298119a14 341 Gene3D G3DSA:1.10.260.40 2 60 1.1E-23 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE2158 84ad1ddaaefbc0698aa46f5298119a14 341 PANTHER PTHR30146 1 340 2.4E-165 T 22-04-2016 YE2158 84ad1ddaaefbc0698aa46f5298119a14 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 5.6E-6 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE2158 84ad1ddaaefbc0698aa46f5298119a14 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 5.6E-6 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE2158 84ad1ddaaefbc0698aa46f5298119a14 341 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE2158 84ad1ddaaefbc0698aa46f5298119a14 341 Hamap MF_01277 HTH-type transcriptional repressor PurR [purR]. 1 335 63.452 T 22-04-2016 IPR023588 Transcription regulator HTH, PurR GO:0006355 UniPathway: UPA00488 YE2158 84ad1ddaaefbc0698aa46f5298119a14 341 SUPERFAMILY SSF53822 60 340 3.73E-95 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YE2158 84ad1ddaaefbc0698aa46f5298119a14 341 SUPERFAMILY SSF47413 1 59 2.25E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE2158 84ad1ddaaefbc0698aa46f5298119a14 341 Gene3D G3DSA:3.40.50.2300 61 170 2.1E-34 T 22-04-2016 YE2158 84ad1ddaaefbc0698aa46f5298119a14 341 PANTHER PTHR30146:SF30 1 340 2.4E-165 T 22-04-2016 YE2158 84ad1ddaaefbc0698aa46f5298119a14 341 Pfam PF13377 Periplasmic binding protein-like domain 171 331 1.3E-41 T 22-04-2016 YE2158 84ad1ddaaefbc0698aa46f5298119a14 341 SMART SM00354 1 71 2.0E-36 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE2158 84ad1ddaaefbc0698aa46f5298119a14 341 Gene3D G3DSA:3.40.50.2300 171 332 4.5E-62 T 22-04-2016 YE0603 aa928b2a708666f7dc4321f323f34d9e 258 PANTHER PTHR30283 2 254 5.6E-128 T 22-04-2016 YE0603 aa928b2a708666f7dc4321f323f34d9e 258 PANTHER PTHR30283:SF3 2 254 5.6E-128 T 22-04-2016 YE0603 aa928b2a708666f7dc4321f323f34d9e 258 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 38.244 T 22-04-2016 IPR005583 Peroxide stress protein YaaA YE0603 aa928b2a708666f7dc4321f323f34d9e 258 Pfam PF03883 Protein of unknown function (DUF328) 1 242 1.9E-92 T 22-04-2016 IPR005583 Peroxide stress protein YaaA YE0990 4cfe540f791fa7e6a1c1638b5a4ac341 611 Pfam PF12532 Protein of unknown function (DUF3732) 434 607 3.8E-34 T 22-04-2016 IPR022205 Protein of unknown function DUF3732 YE0990 4cfe540f791fa7e6a1c1638b5a4ac341 611 Gene3D G3DSA:3.40.50.300 23 67 6.9E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0990 4cfe540f791fa7e6a1c1638b5a4ac341 611 SUPERFAMILY SSF52540 440 537 7.83E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0990 4cfe540f791fa7e6a1c1638b5a4ac341 611 SUPERFAMILY SSF52540 205 333 7.83E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0990 4cfe540f791fa7e6a1c1638b5a4ac341 611 SUPERFAMILY SSF52540 23 88 7.83E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0293 3fea298196fd296a018f64b1b8942d81 628 PANTHER PTHR30557 5 85 0.0 T 22-04-2016 YE0293 3fea298196fd296a018f64b1b8942d81 628 PANTHER PTHR30557 177 613 0.0 T 22-04-2016 YE0293 3fea298196fd296a018f64b1b8942d81 628 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 126 578 2.9E-224 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 YE0293 3fea298196fd296a018f64b1b8942d81 628 PANTHER PTHR30557:SF1 119 149 0.0 T 22-04-2016 YE0293 3fea298196fd296a018f64b1b8942d81 628 PANTHER PTHR30557:SF1 177 613 0.0 T 22-04-2016 YE0293 3fea298196fd296a018f64b1b8942d81 628 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 126 580 56.304 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 YE0293 3fea298196fd296a018f64b1b8942d81 628 PANTHER PTHR30557:SF1 5 85 0.0 T 22-04-2016 YE0293 3fea298196fd296a018f64b1b8942d81 628 PANTHER PTHR30557 119 149 0.0 T 22-04-2016 YE0293 3fea298196fd296a018f64b1b8942d81 628 Pfam PF01964 Radical SAM ThiC family 127 575 1.7E-200 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 YE0293 3fea298196fd296a018f64b1b8942d81 628 Pfam PF13667 ThiC-associated domain 6 86 8.0E-34 T 22-04-2016 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 YE2744 24fd9ad6a4043e09720f948b842d6a1b 185 PANTHER PTHR33941 66 184 5.1E-41 T 22-04-2016 YE2744 24fd9ad6a4043e09720f948b842d6a1b 185 SUPERFAMILY SSF143414 3 94 9.55E-23 T 22-04-2016 YE2744 24fd9ad6a4043e09720f948b842d6a1b 185 SUPERFAMILY SSF143414 95 181 3.14E-23 T 22-04-2016 YE2744 24fd9ad6a4043e09720f948b842d6a1b 185 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 95 156 1.0E-21 T 22-04-2016 YE2744 24fd9ad6a4043e09720f948b842d6a1b 185 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 1 66 6.0E-22 T 22-04-2016 YE2744 24fd9ad6a4043e09720f948b842d6a1b 185 Pfam PF00936 BMC domain 4 76 3.4E-19 T 22-04-2016 IPR000249 Microcompartment protein, bacteria YE2744 24fd9ad6a4043e09720f948b842d6a1b 185 Pfam PF00936 BMC domain 96 173 4.0E-21 T 22-04-2016 IPR000249 Microcompartment protein, bacteria YE2744 24fd9ad6a4043e09720f948b842d6a1b 185 PANTHER PTHR33941:SF3 66 184 5.1E-41 T 22-04-2016 YE2744 24fd9ad6a4043e09720f948b842d6a1b 185 PIRSF PIRSF034834 1 183 3.7E-73 T 22-04-2016 IPR011238 Polyhedral organelle shell protein PduT YE2744 24fd9ad6a4043e09720f948b842d6a1b 185 SMART SM00877 3 77 8.6E-21 T 22-04-2016 IPR000249 Microcompartment protein, bacteria YE2744 24fd9ad6a4043e09720f948b842d6a1b 185 SMART SM00877 95 173 3.9E-27 T 22-04-2016 IPR000249 Microcompartment protein, bacteria YE0664 5bffee1cacafa310f6f7b94f3fb6325a 320 SUPERFAMILY SSF53335 220 318 9.1E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE0664 5bffee1cacafa310f6f7b94f3fb6325a 320 SUPERFAMILY SSF53335 14 120 9.1E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE0664 5bffee1cacafa310f6f7b94f3fb6325a 320 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 14 318 38.187 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YE0664 5bffee1cacafa310f6f7b94f3fb6325a 320 Gene3D G3DSA:3.40.50.150 223 319 8.2E-50 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE0664 5bffee1cacafa310f6f7b94f3fb6325a 320 Gene3D G3DSA:3.40.50.150 14 117 8.2E-50 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE0664 5bffee1cacafa310f6f7b94f3fb6325a 320 PANTHER PTHR11265 9 320 3.0E-156 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YE0664 5bffee1cacafa310f6f7b94f3fb6325a 320 Gene3D G3DSA:1.10.150.170 119 222 4.3E-37 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YE0664 5bffee1cacafa310f6f7b94f3fb6325a 320 SUPERFAMILY SSF81799 121 220 2.88E-34 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YE0664 5bffee1cacafa310f6f7b94f3fb6325a 320 PIRSF PIRSF004486 8 319 3.4E-100 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YE0664 5bffee1cacafa310f6f7b94f3fb6325a 320 Pfam PF01795 MraW methylase family 12 317 2.5E-115 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YE0664 5bffee1cacafa310f6f7b94f3fb6325a 320 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 10 317 4.5E-125 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YE0664 5bffee1cacafa310f6f7b94f3fb6325a 320 PANTHER PTHR11265:SF0 9 320 3.0E-156 T 22-04-2016 YE1355 825cd4097041852842bbce4d5bb9bdaf 507 PANTHER PTHR22773:SF40 1 499 3.1E-197 T 22-04-2016 YE1355 825cd4097041852842bbce4d5bb9bdaf 507 Pfam PF00361 Proton-conducting membrane transporter 134 431 9.3E-71 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 YE1355 825cd4097041852842bbce4d5bb9bdaf 507 PANTHER PTHR22773 1 499 3.1E-197 T 22-04-2016 YE1355 825cd4097041852842bbce4d5bb9bdaf 507 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 389 415 7.7E-37 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 YE1355 825cd4097041852842bbce4d5bb9bdaf 507 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 174 198 7.7E-37 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 YE1355 825cd4097041852842bbce4d5bb9bdaf 507 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 139 158 7.7E-37 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 YE1355 825cd4097041852842bbce4d5bb9bdaf 507 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 337 356 7.7E-37 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 YE1355 825cd4097041852842bbce4d5bb9bdaf 507 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 249 273 7.7E-37 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 YE1355 825cd4097041852842bbce4d5bb9bdaf 507 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 3 496 3.0E-182 T 22-04-2016 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 YE1066 5953438425560579e08dde757f1ddc2a 1678 Pfam PF10569 Alpha-macro-globulin thiol-ester bond-forming region 1200 1218 7.3E-5 T 22-04-2016 IPR019565 Alpha-2-macroglobulin, thiol-ester bond-forming YE1066 5953438425560579e08dde757f1ddc2a 1678 PANTHER PTHR11412 266 665 6.8E-253 T 22-04-2016 YE1066 5953438425560579e08dde757f1ddc2a 1678 PANTHER PTHR11412 1660 1677 6.8E-253 T 22-04-2016 YE1066 5953438425560579e08dde757f1ddc2a 1678 PANTHER PTHR11412 681 979 6.8E-253 T 22-04-2016 YE1066 5953438425560579e08dde757f1ddc2a 1678 SMART SM01360 986 1075 3.2E-18 T 22-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 YE1066 5953438425560579e08dde757f1ddc2a 1678 PANTHER PTHR11412:SF104 266 665 6.8E-253 T 22-04-2016 YE1066 5953438425560579e08dde757f1ddc2a 1678 PANTHER PTHR11412:SF104 1660 1677 6.8E-253 T 22-04-2016 YE1066 5953438425560579e08dde757f1ddc2a 1678 PANTHER PTHR11412:SF104 681 979 6.8E-253 T 22-04-2016 YE1066 5953438425560579e08dde757f1ddc2a 1678 SMART SM01359 773 921 7.0E-38 T 22-04-2016 IPR011625 Alpha-2-macroglobulin, N-terminal 2 YE1066 5953438425560579e08dde757f1ddc2a 1678 Pfam PF00207 Alpha-2-macroglobulin family 993 1072 1.6E-7 T 22-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 YE1066 5953438425560579e08dde757f1ddc2a 1678 PIRSF PIRSF038980 8 1678 0.0 T 22-04-2016 IPR026284 Alpha-2-macroglobulin domain protein, bacteria YE1066 5953438425560579e08dde757f1ddc2a 1678 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 774 921 1.4E-12 T 22-04-2016 IPR011625 Alpha-2-macroglobulin, N-terminal 2 YE1066 5953438425560579e08dde757f1ddc2a 1678 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 303 395 8.5E-21 T 22-04-2016 IPR021868 Alpha-2-macroglobulin MG1 domain YE1066 5953438425560579e08dde757f1ddc2a 1678 SUPERFAMILY SSF48239 1195 1451 1.1E-37 T 22-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid YE1066 5953438425560579e08dde757f1ddc2a 1678 Gene3D G3DSA:1.50.10.20 1194 1451 1.5E-36 T 22-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid YE1066 5953438425560579e08dde757f1ddc2a 1678 Pfam PF01835 MG2 domain 402 493 2.5E-19 T 22-04-2016 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 YE0705 fd7a5a1eb936a354b10abece3ec80162 865 ProSitePatterns PS01244 Aconitase family signature 2. 761 774 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YE0705 fd7a5a1eb936a354b10abece3ec80162 865 Pfam PF00330 Aconitase family (aconitate hydratase) 472 818 7.8E-41 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YE0705 fd7a5a1eb936a354b10abece3ec80162 865 PANTHER PTHR11670 305 860 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YE0705 fd7a5a1eb936a354b10abece3ec80162 865 PIRSF PIRSF036687 1 859 0.0 T 22-04-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 YE0705 fd7a5a1eb936a354b10abece3ec80162 865 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 4.8E-96 T 22-04-2016 IPR015929 Aconitase B, N-terminal GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 YE0705 fd7a5a1eb936a354b10abece3ec80162 865 ProSitePatterns PS00450 Aconitase family signature 1. 702 719 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YE0705 fd7a5a1eb936a354b10abece3ec80162 865 SUPERFAMILY SSF52016 162 370 9.22E-72 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YE0705 fd7a5a1eb936a354b10abece3ec80162 865 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 854 0.0 T 22-04-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 YE0705 fd7a5a1eb936a354b10abece3ec80162 865 PANTHER PTHR11670:SF39 305 860 0.0 T 22-04-2016 YE0705 fd7a5a1eb936a354b10abece3ec80162 865 SUPERFAMILY SSF74778 2 160 1.07E-67 T 22-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 YE0705 fd7a5a1eb936a354b10abece3ec80162 865 Gene3D G3DSA:3.20.19.10 162 360 6.7E-94 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YE0705 fd7a5a1eb936a354b10abece3ec80162 865 Gene3D G3DSA:3.30.499.10 402 519 4.9E-64 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YE0705 fd7a5a1eb936a354b10abece3ec80162 865 SUPERFAMILY SSF53732 379 859 2.22E-151 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YE0705 fd7a5a1eb936a354b10abece3ec80162 865 Pfam PF11791 Aconitate B N-terminal domain 4 156 6.4E-66 T 22-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 YE0705 fd7a5a1eb936a354b10abece3ec80162 865 Gene3D G3DSA:3.30.499.10 684 859 7.0E-55 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YE0705 fd7a5a1eb936a354b10abece3ec80162 865 Gene3D G3DSA:3.40.1060.10 520 682 9.9E-87 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YE3561 6de23a5a80bf567e6cf50dafde2deaf5 789 Gene3D G3DSA:3.40.190.10 132 215 5.5E-5 T 22-04-2016 YE3561 6de23a5a80bf567e6cf50dafde2deaf5 789 Pfam PF00072 Response regulator receiver domain 665 777 2.0E-17 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE3561 6de23a5a80bf567e6cf50dafde2deaf5 789 SUPERFAMILY SSF52172 661 783 9.11E-24 T 22-04-2016 IPR011006 CheY-like superfamily YE3561 6de23a5a80bf567e6cf50dafde2deaf5 789 SMART SM00388 308 373 9.8E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE3561 6de23a5a80bf567e6cf50dafde2deaf5 789 SUPERFAMILY SSF53850 34 258 4.27E-29 T 22-04-2016 YE3561 6de23a5a80bf567e6cf50dafde2deaf5 789 Gene3D G3DSA:1.10.287.130 310 354 1.9E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE3561 6de23a5a80bf567e6cf50dafde2deaf5 789 Gene3D G3DSA:3.40.190.10 40 128 3.9E-10 T 22-04-2016 YE3561 6de23a5a80bf567e6cf50dafde2deaf5 789 Gene3D G3DSA:3.40.190.10 222 262 3.9E-10 T 22-04-2016 YE3561 6de23a5a80bf567e6cf50dafde2deaf5 789 Gene3D G3DSA:3.40.50.2300 661 787 1.1E-24 T 22-04-2016 YE3561 6de23a5a80bf567e6cf50dafde2deaf5 789 SMART SM00062 42 262 1.6E-8 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YE3561 6de23a5a80bf567e6cf50dafde2deaf5 789 PANTHER PTHR24423 294 543 2.1E-68 T 22-04-2016 YE3561 6de23a5a80bf567e6cf50dafde2deaf5 789 PANTHER PTHR24423 70 78 2.1E-68 T 22-04-2016 YE3561 6de23a5a80bf567e6cf50dafde2deaf5 789 PANTHER PTHR24423 579 787 2.1E-68 T 22-04-2016 YE3561 6de23a5a80bf567e6cf50dafde2deaf5 789 SUPERFAMILY SSF47384 295 373 1.24E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE3561 6de23a5a80bf567e6cf50dafde2deaf5 789 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 46 259 3.0E-18 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YE3561 6de23a5a80bf567e6cf50dafde2deaf5 789 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 475 7.3E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE3561 6de23a5a80bf567e6cf50dafde2deaf5 789 PRINTS PR00344 Bacterial sensor protein C-terminal signature 524 537 7.3E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE3561 6de23a5a80bf567e6cf50dafde2deaf5 789 PRINTS PR00344 Bacterial sensor protein C-terminal signature 500 518 7.3E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE3561 6de23a5a80bf567e6cf50dafde2deaf5 789 SMART SM00387 421 540 2.5E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE3561 6de23a5a80bf567e6cf50dafde2deaf5 789 SMART SM00448 662 777 7.6E-17 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE3561 6de23a5a80bf567e6cf50dafde2deaf5 789 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 425 537 1.1E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE3561 6de23a5a80bf567e6cf50dafde2deaf5 789 Gene3D G3DSA:3.30.565.10 377 538 3.0E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE3561 6de23a5a80bf567e6cf50dafde2deaf5 789 SUPERFAMILY SSF55874 365 539 1.23E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE3269 245beb21863a704e4f4127135ead254c 1171 SMART SM00481 18 85 2.0E-28 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 YE3269 245beb21863a704e4f4127135ead254c 1171 Gene3D G3DSA:2.40.50.140 996 1089 2.5E-9 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE3269 245beb21863a704e4f4127135ead254c 1171 Gene3D G3DSA:3.20.20.140 17 267 1.4E-21 T 22-04-2016 YE3269 245beb21863a704e4f4127135ead254c 1171 Pfam PF02811 PHP domain 19 183 8.3E-45 T 22-04-2016 IPR004013 PHP domain GO:0003824 YE3269 245beb21863a704e4f4127135ead254c 1171 PANTHER PTHR32294:SF0 13 1171 0.0 T 22-04-2016 YE3269 245beb21863a704e4f4127135ead254c 1171 Pfam PF14579 Helix-hairpin-helix motif 819 908 6.7E-24 T 22-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE3269 245beb21863a704e4f4127135ead254c 1171 Pfam PF01336 OB-fold nucleic acid binding domain 1011 1082 1.6E-7 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 YE3269 245beb21863a704e4f4127135ead254c 1171 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 302 745 2.3E-176 T 22-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE3269 245beb21863a704e4f4127135ead254c 1171 Gene3D G3DSA:1.10.150.280 847 893 7.0E-5 T 22-04-2016 YE3269 245beb21863a704e4f4127135ead254c 1171 PANTHER PTHR32294 13 1171 0.0 T 22-04-2016 YE3269 245beb21863a704e4f4127135ead254c 1171 SUPERFAMILY SSF89550 17 274 4.71E-18 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 YE3269 245beb21863a704e4f4127135ead254c 1171 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 17 1042 0.0 T 22-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE2612 5ba7eb196f0679db732e81f354058b8a 434 SUPERFAMILY SSF56322 10 432 5.49E-96 T 22-04-2016 IPR005801 ADC synthase GO:0009058 YE2612 5ba7eb196f0679db732e81f354058b8a 434 PANTHER PTHR11236 20 434 7.8E-274 T 22-04-2016 YE2612 5ba7eb196f0679db732e81f354058b8a 434 PANTHER PTHR11236:SF17 20 434 7.8E-274 T 22-04-2016 YE2612 5ba7eb196f0679db732e81f354058b8a 434 Pfam PF00425 chorismate binding enzyme 173 424 3.9E-69 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal YE2612 5ba7eb196f0679db732e81f354058b8a 434 Gene3D G3DSA:3.60.120.10 48 432 8.9E-85 T 22-04-2016 IPR005801 ADC synthase GO:0009058 YE2612 5ba7eb196f0679db732e81f354058b8a 434 TIGRFAM TIGR03494 salicyl_syn: salicylate synthase 15 434 4.1E-205 T 22-04-2016 IPR019996 Salicylate synthase GO:0008909|GO:0016833 KEGG: 00130+5.4.4.2|KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6120|MetaCyc: PWY-6406|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00011 YE4017 4b3987d13f67170771a9d79d0b995d70 559 Gene3D G3DSA:3.40.50.970 369 552 5.6E-54 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE4017 4b3987d13f67170771a9d79d0b995d70 559 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 12 177 7.6E-48 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 YE4017 4b3987d13f67170771a9d79d0b995d70 559 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 393 538 2.7E-38 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 YE4017 4b3987d13f67170771a9d79d0b995d70 559 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 430 449 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 YE4017 4b3987d13f67170771a9d79d0b995d70 559 PANTHER PTHR18968 12 552 3.1E-254 T 22-04-2016 YE4017 4b3987d13f67170771a9d79d0b995d70 559 Gene3D G3DSA:3.40.50.1220 195 352 4.4E-37 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain YE4017 4b3987d13f67170771a9d79d0b995d70 559 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 199 331 1.1E-28 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 YE4017 4b3987d13f67170771a9d79d0b995d70 559 SUPERFAMILY SSF52518 371 551 7.27E-51 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE4017 4b3987d13f67170771a9d79d0b995d70 559 PANTHER PTHR18968:SF129 12 552 3.1E-254 T 22-04-2016 YE4017 4b3987d13f67170771a9d79d0b995d70 559 SUPERFAMILY SSF52518 11 181 1.03E-45 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE4017 4b3987d13f67170771a9d79d0b995d70 559 SUPERFAMILY SSF52467 195 355 2.1E-36 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain YE4017 4b3987d13f67170771a9d79d0b995d70 559 Gene3D G3DSA:3.40.50.970 12 179 1.1E-57 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE4017 4b3987d13f67170771a9d79d0b995d70 559 TIGRFAM TIGR02418 acolac_catab: acetolactate synthase, catabolic 13 551 8.1E-261 T 22-04-2016 IPR012782 Acetolactate synthase, catabolic GO:0000287|GO:0003984|GO:0030976|GO:0034077 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00626 YE0280 3f0db8b79c3aa21e2123b26b5ffd87e7 181 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 24.616 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 YE0280 3f0db8b79c3aa21e2123b26b5ffd87e7 181 Pfam PF00467 KOW motif 130 162 6.2E-8 T 22-04-2016 IPR005824 KOW YE0280 3f0db8b79c3aa21e2123b26b5ffd87e7 181 SMART SM00738 6 115 2.0E-50 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 YE0280 3f0db8b79c3aa21e2123b26b5ffd87e7 181 Gene3D G3DSA:3.30.70.940 6 116 7.6E-43 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 YE0280 3f0db8b79c3aa21e2123b26b5ffd87e7 181 SUPERFAMILY SSF82679 6 116 3.4E-40 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 YE0280 3f0db8b79c3aa21e2123b26b5ffd87e7 181 SUPERFAMILY SSF50104 125 180 1.15E-19 T 22-04-2016 IPR008991 Translation protein SH3-like domain YE0280 3f0db8b79c3aa21e2123b26b5ffd87e7 181 Gene3D G3DSA:2.30.30.30 120 180 2.0E-31 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 YE0280 3f0db8b79c3aa21e2123b26b5ffd87e7 181 SMART SM00739 127 154 2.0E-6 T 22-04-2016 IPR005824 KOW YE0280 3f0db8b79c3aa21e2123b26b5ffd87e7 181 Pfam PF02357 Transcription termination factor nusG 7 112 1.9E-27 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 YE0280 3f0db8b79c3aa21e2123b26b5ffd87e7 181 ProSitePatterns PS01014 Transcription termination factor nusG signature. 164 173 - T 22-04-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site YE0280 3f0db8b79c3aa21e2123b26b5ffd87e7 181 PANTHER PTHR30265 3 180 9.4E-87 T 22-04-2016 YE0280 3f0db8b79c3aa21e2123b26b5ffd87e7 181 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 1.9E-21 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 YE0280 3f0db8b79c3aa21e2123b26b5ffd87e7 181 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 1.9E-21 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 YE0280 3f0db8b79c3aa21e2123b26b5ffd87e7 181 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 1.9E-21 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 YE0280 3f0db8b79c3aa21e2123b26b5ffd87e7 181 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 180 1.1E-70 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 YE3215 f37ba2b97c0b972961338db369c9c315 407 Pfam PF00175 Oxidoreductase NAD-binding domain 277 386 9.3E-19 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 YE3215 f37ba2b97c0b972961338db369c9c315 407 SUPERFAMILY SSF52343 255 402 2.62E-38 T 22-04-2016 YE3215 f37ba2b97c0b972961338db369c9c315 407 SUPERFAMILY SSF54292 36 124 2.56E-22 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YE3215 f37ba2b97c0b972961338db369c9c315 407 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 1 407 63.036 T 22-04-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 YE3215 f37ba2b97c0b972961338db369c9c315 407 PIRSF PIRSF000044 1 407 4.3E-219 T 22-04-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 YE3215 f37ba2b97c0b972961338db369c9c315 407 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 43 114 3.1E-10 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YE3215 f37ba2b97c0b972961338db369c9c315 407 PANTHER PTHR19370:SF32 62 176 7.7E-147 T 22-04-2016 YE3215 f37ba2b97c0b972961338db369c9c315 407 PANTHER PTHR19370:SF32 205 407 7.7E-147 T 22-04-2016 YE3215 f37ba2b97c0b972961338db369c9c315 407 PANTHER PTHR19370 62 176 7.7E-147 T 22-04-2016 YE3215 f37ba2b97c0b972961338db369c9c315 407 PANTHER PTHR19370 205 407 7.7E-147 T 22-04-2016 YE3215 f37ba2b97c0b972961338db369c9c315 407 SUPERFAMILY SSF63380 105 272 2.92E-35 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 YE3215 f37ba2b97c0b972961338db369c9c315 407 Pfam PF00970 Oxidoreductase FAD-binding domain 204 266 7.2E-9 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain YE3215 f37ba2b97c0b972961338db369c9c315 407 Gene3D G3DSA:3.40.50.80 269 406 1.8E-43 T 22-04-2016 YE3215 f37ba2b97c0b972961338db369c9c315 407 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 3 407 2.0E-235 T 22-04-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 YE3215 f37ba2b97c0b972961338db369c9c315 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 314 325 9.9E-5 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YE3215 f37ba2b97c0b972961338db369c9c315 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 276 295 9.9E-5 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YE3215 f37ba2b97c0b972961338db369c9c315 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 209 216 9.9E-5 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YE3215 f37ba2b97c0b972961338db369c9c315 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 242 251 9.9E-5 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 YE3215 f37ba2b97c0b972961338db369c9c315 407 Gene3D G3DSA:2.40.30.10 124 264 5.8E-59 T 22-04-2016 YE3215 f37ba2b97c0b972961338db369c9c315 407 Gene3D G3DSA:3.10.20.30 34 123 1.8E-22 T 22-04-2016 IPR012675 Beta-grasp domain YE1826 2e62760cf377eae326f1178e8ddfe725 249 PANTHER PTHR32552 16 247 3.7E-54 T 22-04-2016 YE1826 2e62760cf377eae326f1178e8ddfe725 249 SUPERFAMILY SSF53098 78 243 3.67E-37 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE1826 2e62760cf377eae326f1178e8ddfe725 249 Pfam PF13276 HTH-like domain 11 61 1.5E-10 T 22-04-2016 IPR025948 HTH-like domain YE1826 2e62760cf377eae326f1178e8ddfe725 249 Gene3D G3DSA:3.30.420.10 79 238 1.7E-30 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE1826 2e62760cf377eae326f1178e8ddfe725 249 Pfam PF00665 Integrase core domain 88 199 8.9E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YE0832 2e62760cf377eae326f1178e8ddfe725 249 PANTHER PTHR32552 16 247 3.7E-54 T 22-04-2016 YE0832 2e62760cf377eae326f1178e8ddfe725 249 SUPERFAMILY SSF53098 78 243 3.67E-37 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE0832 2e62760cf377eae326f1178e8ddfe725 249 Pfam PF13276 HTH-like domain 11 61 1.5E-10 T 22-04-2016 IPR025948 HTH-like domain YE0832 2e62760cf377eae326f1178e8ddfe725 249 Gene3D G3DSA:3.30.420.10 79 238 1.7E-30 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE0832 2e62760cf377eae326f1178e8ddfe725 249 Pfam PF00665 Integrase core domain 88 199 8.9E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YE0029 76af5a154cef9cc3c7b902b490512a7a 607 Gene3D G3DSA:2.40.30.10 206 303 2.3E-28 T 22-04-2016 YE0029 76af5a154cef9cc3c7b902b490512a7a 607 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 134 1.2E-25 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 YE0029 76af5a154cef9cc3c7b902b490512a7a 607 PANTHER PTHR23115:SF14 3 593 7.0E-304 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 YE0029 76af5a154cef9cc3c7b902b490512a7a 607 Gene3D G3DSA:3.30.70.240 400 478 2.9E-30 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain YE0029 76af5a154cef9cc3c7b902b490512a7a 607 PANTHER PTHR23115 3 593 7.0E-304 T 22-04-2016 YE0029 76af5a154cef9cc3c7b902b490512a7a 607 Pfam PF00009 Elongation factor Tu GTP binding domain 4 194 3.4E-57 T 22-04-2016 YE0029 76af5a154cef9cc3c7b902b490512a7a 607 PRINTS PR00315 GTP-binding elongation factor signature 87 98 9.6E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YE0029 76af5a154cef9cc3c7b902b490512a7a 607 PRINTS PR00315 GTP-binding elongation factor signature 123 132 9.6E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YE0029 76af5a154cef9cc3c7b902b490512a7a 607 PRINTS PR00315 GTP-binding elongation factor signature 71 81 9.6E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YE0029 76af5a154cef9cc3c7b902b490512a7a 607 PRINTS PR00315 GTP-binding elongation factor signature 51 59 9.6E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YE0029 76af5a154cef9cc3c7b902b490512a7a 607 PRINTS PR00315 GTP-binding elongation factor signature 7 20 9.6E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YE0029 76af5a154cef9cc3c7b902b490512a7a 607 SUPERFAMILY SSF54980 302 387 1.01E-15 T 22-04-2016 IPR009022 Elongation factor G, III-V domain YE0029 76af5a154cef9cc3c7b902b490512a7a 607 Gene3D G3DSA:2.40.50.250 483 577 8.6E-40 T 22-04-2016 YE0029 76af5a154cef9cc3c7b902b490512a7a 607 Gene3D G3DSA:3.40.50.300 3 205 2.8E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0029 76af5a154cef9cc3c7b902b490512a7a 607 SUPERFAMILY SSF50447 151 299 9.28E-34 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain YE0029 76af5a154cef9cc3c7b902b490512a7a 607 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site YE0029 76af5a154cef9cc3c7b902b490512a7a 607 Pfam PF00679 Elongation factor G C-terminus 397 476 5.5E-21 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain YE0029 76af5a154cef9cc3c7b902b490512a7a 607 SUPERFAMILY SSF52540 3 219 4.43E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0029 76af5a154cef9cc3c7b902b490512a7a 607 Pfam PF03144 Elongation factor Tu domain 2 219 289 1.1E-12 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 YE0029 76af5a154cef9cc3c7b902b490512a7a 607 SUPERFAMILY SSF54980 398 512 1.1E-25 T 22-04-2016 IPR009022 Elongation factor G, III-V domain YE0029 76af5a154cef9cc3c7b902b490512a7a 607 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 5 599 1.2E-290 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 YE0029 76af5a154cef9cc3c7b902b490512a7a 607 Gene3D G3DSA:3.30.70.870 304 399 3.1E-37 T 22-04-2016 YE3931 ac4b0d67923d65bdf831e4b2d3f071fb 95 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 2 95 3.9E-29 T 22-04-2016 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 YE3931 ac4b0d67923d65bdf831e4b2d3f071fb 95 Gene3D G3DSA:3.40.1260.10 1 93 5.2E-32 T 22-04-2016 IPR027396 DsrEFH-like YE3931 ac4b0d67923d65bdf831e4b2d3f071fb 95 Hamap MF_01564 Protein TusB [tusB]. 1 95 27.602 T 22-04-2016 IPR023526 Sulphur relay, TusB GO:0002143|GO:0005737 YE3931 ac4b0d67923d65bdf831e4b2d3f071fb 95 SUPERFAMILY SSF75169 1 95 5.89E-29 T 22-04-2016 IPR027396 DsrEFH-like YE3931 ac4b0d67923d65bdf831e4b2d3f071fb 95 Pfam PF04077 DsrH like protein 7 92 1.3E-27 T 22-04-2016 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 YE3931 ac4b0d67923d65bdf831e4b2d3f071fb 95 PANTHER PTHR37526 1 95 3.2E-32 T 22-04-2016 YE1226 f15c718e2c07b2dd5e21d3c0bb296d25 414 Gene3D G3DSA:1.20.1250.20 6 188 9.6E-21 T 22-04-2016 YE1226 f15c718e2c07b2dd5e21d3c0bb296d25 414 Pfam PF07690 Major Facilitator Superfamily 219 398 1.2E-16 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YE1226 f15c718e2c07b2dd5e21d3c0bb296d25 414 PANTHER PTHR11360:SF3 4 392 8.1E-99 T 22-04-2016 YE1226 f15c718e2c07b2dd5e21d3c0bb296d25 414 Gene3D G3DSA:1.20.1250.20 218 393 1.3E-19 T 22-04-2016 YE1226 f15c718e2c07b2dd5e21d3c0bb296d25 414 PANTHER PTHR11360 4 392 8.1E-99 T 22-04-2016 YE1226 f15c718e2c07b2dd5e21d3c0bb296d25 414 SUPERFAMILY SSF103473 6 391 3.27E-47 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE3943 931f498d23f1ffd7f030558dd0caffbf 322 SUPERFAMILY SSF53448 1 229 2.72E-47 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YE3943 931f498d23f1ffd7f030558dd0caffbf 322 Gene3D G3DSA:3.90.550.10 1 198 5.6E-45 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YE3943 931f498d23f1ffd7f030558dd0caffbf 322 PANTHER PTHR22916:SF17 1 307 1.8E-76 T 22-04-2016 YE3943 931f498d23f1ffd7f030558dd0caffbf 322 PANTHER PTHR22916 1 307 1.8E-76 T 22-04-2016 YE3943 931f498d23f1ffd7f030558dd0caffbf 322 Pfam PF00535 Glycosyl transferase family 2 1 116 1.5E-27 T 22-04-2016 IPR001173 Glycosyltransferase 2-like YE3175 84db7ea6debdefbb1bf47edbc2743ed0 587 SUPERFAMILY SSF56235 25 587 2.32E-184 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal YE3175 84db7ea6debdefbb1bf47edbc2743ed0 587 ProSitePatterns PS00462 Gamma-glutamyltranspeptidase signature. 375 399 - T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 YE3175 84db7ea6debdefbb1bf47edbc2743ed0 587 PANTHER PTHR11686 25 587 2.1E-208 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 YE3175 84db7ea6debdefbb1bf47edbc2743ed0 587 PANTHER PTHR11686:SF9 25 587 2.1E-208 T 22-04-2016 YE3175 84db7ea6debdefbb1bf47edbc2743ed0 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 375 393 1.64E-77 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 YE3175 84db7ea6debdefbb1bf47edbc2743ed0 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 399 417 1.64E-77 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 YE3175 84db7ea6debdefbb1bf47edbc2743ed0 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 56 81 1.64E-77 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 YE3175 84db7ea6debdefbb1bf47edbc2743ed0 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 464 481 1.64E-77 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 YE3175 84db7ea6debdefbb1bf47edbc2743ed0 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 246 262 1.64E-77 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 YE3175 84db7ea6debdefbb1bf47edbc2743ed0 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 147 166 1.64E-77 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 YE3175 84db7ea6debdefbb1bf47edbc2743ed0 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 440 455 1.64E-77 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 YE3175 84db7ea6debdefbb1bf47edbc2743ed0 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 129 147 1.64E-77 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 YE3175 84db7ea6debdefbb1bf47edbc2743ed0 587 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 276 295 1.64E-77 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 YE3175 84db7ea6debdefbb1bf47edbc2743ed0 587 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 34 551 9.1E-174 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 YE3175 84db7ea6debdefbb1bf47edbc2743ed0 587 Pfam PF01019 Gamma-glutamyltranspeptidase 49 578 3.6E-182 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 YE3132 f580d61028e0550b76ebb018f2aee76a 784 Gene3D G3DSA:3.30.230.10 590 771 8.3E-77 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YE3132 f580d61028e0550b76ebb018f2aee76a 784 SUPERFAMILY SSF88697 10 201 1.22E-52 T 22-04-2016 IPR015947 PUA-like domain YE3132 f580d61028e0550b76ebb018f2aee76a 784 SMART SM00382 348 492 2.8E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YE3132 f580d61028e0550b76ebb018f2aee76a 784 PIRSF PIRSF001174 1 775 0.0 T 22-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 YE3132 f580d61028e0550b76ebb018f2aee76a 784 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 352 489 2.0E-17 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 YE3132 f580d61028e0550b76ebb018f2aee76a 784 SUPERFAMILY SSF54211 595 771 1.25E-58 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YE3132 f580d61028e0550b76ebb018f2aee76a 784 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 201 1.3E-44 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 YE3132 f580d61028e0550b76ebb018f2aee76a 784 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 676 684 - T 22-04-2016 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 YE3132 f580d61028e0550b76ebb018f2aee76a 784 Gene3D G3DSA:3.40.50.300 312 499 4.5E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3132 f580d61028e0550b76ebb018f2aee76a 784 Hamap MF_01973 Lon protease [lon]. 11 772 72.143 T 22-04-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 YE3132 f580d61028e0550b76ebb018f2aee76a 784 Gene3D G3DSA:1.10.8.60 500 583 1.5E-33 T 22-04-2016 YE3132 f580d61028e0550b76ebb018f2aee76a 784 SMART SM00464 10 202 7.1E-84 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 YE3132 f580d61028e0550b76ebb018f2aee76a 784 PANTHER PTHR10046:SF43 8 776 0.0 T 22-04-2016 YE3132 f580d61028e0550b76ebb018f2aee76a 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 673 692 5.0E-56 T 22-04-2016 YE3132 f580d61028e0550b76ebb018f2aee76a 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 703 722 5.0E-56 T 22-04-2016 YE3132 f580d61028e0550b76ebb018f2aee76a 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 595 611 5.0E-56 T 22-04-2016 YE3132 f580d61028e0550b76ebb018f2aee76a 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 356 375 5.0E-56 T 22-04-2016 YE3132 f580d61028e0550b76ebb018f2aee76a 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 726 744 5.0E-56 T 22-04-2016 YE3132 f580d61028e0550b76ebb018f2aee76a 784 SUPERFAMILY SSF52540 313 586 1.66E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3132 f580d61028e0550b76ebb018f2aee76a 784 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 570 772 6.7E-96 T 22-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 YE3132 f580d61028e0550b76ebb018f2aee76a 784 PANTHER PTHR10046 8 776 0.0 T 22-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 YE3132 f580d61028e0550b76ebb018f2aee76a 784 TIGRFAM TIGR00763 lon: endopeptidase La 12 770 0.0 T 22-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 YE2840 dd909e1dab851d1e13be789f78f1e5b5 184 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 181 1.6E-27 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE2840 dd909e1dab851d1e13be789f78f1e5b5 184 Pfam PF04542 Sigma-70 region 2 27 93 1.3E-13 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE2840 dd909e1dab851d1e13be789f78f1e5b5 184 Gene3D G3DSA:1.10.1740.10 10 113 1.2E-23 T 22-04-2016 YE2840 dd909e1dab851d1e13be789f78f1e5b5 184 PANTHER PTHR30173:SF16 1 181 9.8E-43 T 22-04-2016 YE2840 dd909e1dab851d1e13be789f78f1e5b5 184 SUPERFAMILY SSF88946 9 106 1.37E-21 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE2840 dd909e1dab851d1e13be789f78f1e5b5 184 Gene3D G3DSA:1.10.10.10 120 182 2.0E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2840 dd909e1dab851d1e13be789f78f1e5b5 184 Pfam PF08281 Sigma-70, region 4 127 178 6.4E-13 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE2840 dd909e1dab851d1e13be789f78f1e5b5 184 PANTHER PTHR30173 1 181 9.8E-43 T 22-04-2016 YE2840 dd909e1dab851d1e13be789f78f1e5b5 184 SUPERFAMILY SSF88659 120 182 2.18E-14 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE0695 5737caa114526e4a67cfac9019ff5a63 457 PANTHER PTHR11785:SF26 1 457 0.0 T 22-04-2016 YE0695 5737caa114526e4a67cfac9019ff5a63 457 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 YE0695 5737caa114526e4a67cfac9019ff5a63 457 Gene3D G3DSA:3.40.50.1820 38 75 7.2E-4 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE0695 5737caa114526e4a67cfac9019ff5a63 457 PIRSF PIRSF006060 1 455 1.5E-70 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YE0695 5737caa114526e4a67cfac9019ff5a63 457 Pfam PF00324 Amino acid permease 18 446 1.9E-116 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 YE0695 5737caa114526e4a67cfac9019ff5a63 457 PANTHER PTHR11785 1 457 0.0 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YE0477 d2e575fddcc65fd879ee59dbbd5822f0 158 Pfam PF06754 Phosphonate metabolism protein PhnG 7 156 3.9E-50 T 22-04-2016 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399 YE0477 d2e575fddcc65fd879ee59dbbd5822f0 158 TIGRFAM TIGR03293 PhnG_redo: phosphonate C-P lyase system protein PhnG 6 157 6.7E-51 T 22-04-2016 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399 YE3048 880724541d543f531d13d73283ef1226 461 PANTHER PTHR10890 1 460 5.8E-259 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 YE3048 880724541d543f531d13d73283ef1226 461 Gene3D G3DSA:3.40.50.620 19 305 1.0E-110 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YE3048 880724541d543f531d13d73283ef1226 461 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 460 2.4E-191 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 YE3048 880724541d543f531d13d73283ef1226 461 SMART SM00840 341 402 7.1E-28 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 YE3048 880724541d543f531d13d73283ef1226 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 6.1E-30 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 YE3048 880724541d543f531d13d73283ef1226 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 6.1E-30 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 YE3048 880724541d543f531d13d73283ef1226 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 6.1E-30 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 YE3048 880724541d543f531d13d73283ef1226 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 6.1E-30 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 YE3048 880724541d543f531d13d73283ef1226 461 SUPERFAMILY SSF52374 1 313 5.63E-101 T 22-04-2016 YE3048 880724541d543f531d13d73283ef1226 461 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 461 39.154 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 YE3048 880724541d543f531d13d73283ef1226 461 SUPERFAMILY SSF47323 316 460 7.45E-43 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YE3048 880724541d543f531d13d73283ef1226 461 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 2.8E-141 T 22-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 YE3048 880724541d543f531d13d73283ef1226 461 Gene3D G3DSA:1.20.120.640 306 392 4.8E-28 T 22-04-2016 YE3048 880724541d543f531d13d73283ef1226 461 Pfam PF09190 DALR domain 341 402 3.0E-24 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 YE0399 19e4c69d0ba086bbce1b3d2d00febe22 657 Pfam PF02872 5'-nucleotidase, C-terminal domain 364 559 1.8E-23 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 YE0399 19e4c69d0ba086bbce1b3d2d00febe22 657 SUPERFAMILY SSF56300 26 362 5.91E-86 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like YE0399 19e4c69d0ba086bbce1b3d2d00febe22 657 Gene3D G3DSA:3.90.780.10 369 604 1.1E-45 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 YE0399 19e4c69d0ba086bbce1b3d2d00febe22 657 PANTHER PTHR11575 1 654 0.0 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 YE0399 19e4c69d0ba086bbce1b3d2d00febe22 657 Pfam PF00149 Calcineurin-like phosphoesterase 33 268 8.6E-11 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 YE0399 19e4c69d0ba086bbce1b3d2d00febe22 657 PANTHER PTHR11575:SF6 1 654 0.0 T 22-04-2016 YE0399 19e4c69d0ba086bbce1b3d2d00febe22 657 PRINTS PR01607 Apyrase family signature 31 49 8.3E-32 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 YE0399 19e4c69d0ba086bbce1b3d2d00febe22 657 PRINTS PR01607 Apyrase family signature 252 275 8.3E-32 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 YE0399 19e4c69d0ba086bbce1b3d2d00febe22 657 PRINTS PR01607 Apyrase family signature 224 241 8.3E-32 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 YE0399 19e4c69d0ba086bbce1b3d2d00febe22 657 PRINTS PR01607 Apyrase family signature 292 312 8.3E-32 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 YE0399 19e4c69d0ba086bbce1b3d2d00febe22 657 PRINTS PR01607 Apyrase family signature 539 558 8.3E-32 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 YE0399 19e4c69d0ba086bbce1b3d2d00febe22 657 PRINTS PR01607 Apyrase family signature 437 460 8.3E-32 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 YE0399 19e4c69d0ba086bbce1b3d2d00febe22 657 ProSitePatterns PS00785 5'-nucleotidase signature 1. 33 45 - T 22-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 YE0399 19e4c69d0ba086bbce1b3d2d00febe22 657 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 31 656 0.0 T 22-04-2016 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 YE0399 19e4c69d0ba086bbce1b3d2d00febe22 657 ProSitePatterns PS00786 5'-nucleotidase signature 2. 118 129 - T 22-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 YE0399 19e4c69d0ba086bbce1b3d2d00febe22 657 Gene3D G3DSA:3.60.21.10 22 368 5.7E-96 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like YE0399 19e4c69d0ba086bbce1b3d2d00febe22 657 SUPERFAMILY SSF55816 364 605 5.49E-39 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 YE2918 2eeafb85bebce15df13c1b4e215c4a96 368 PANTHER PTHR11943:SF2 3 291 3.5E-212 T 22-04-2016 YE2918 2eeafb85bebce15df13c1b4e215c4a96 368 PANTHER PTHR11943:SF2 309 368 3.5E-212 T 22-04-2016 YE2918 2eeafb85bebce15df13c1b4e215c4a96 368 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 151 168 - T 22-04-2016 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YE2918 2eeafb85bebce15df13c1b4e215c4a96 368 SUPERFAMILY SSF54197 179 364 1.19E-52 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 YE2918 2eeafb85bebce15df13c1b4e215c4a96 368 SUPERFAMILY SSF54197 4 177 3.02E-73 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 YE2918 2eeafb85bebce15df13c1b4e215c4a96 368 Gene3D G3DSA:3.30.428.10 45 175 1.0E-58 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 YE2918 2eeafb85bebce15df13c1b4e215c4a96 368 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 1 366 6.8E-195 T 22-04-2016 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YE2918 2eeafb85bebce15df13c1b4e215c4a96 368 Gene3D G3DSA:3.30.428.10 176 364 2.2E-75 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 YE2918 2eeafb85bebce15df13c1b4e215c4a96 368 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 4 176 2.5E-71 T 22-04-2016 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YE2918 2eeafb85bebce15df13c1b4e215c4a96 368 PANTHER PTHR11943 3 291 3.5E-212 T 22-04-2016 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YE2918 2eeafb85bebce15df13c1b4e215c4a96 368 PANTHER PTHR11943 309 368 3.5E-212 T 22-04-2016 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YE2918 2eeafb85bebce15df13c1b4e215c4a96 368 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 183 365 9.8E-63 T 22-04-2016 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YE2918 2eeafb85bebce15df13c1b4e215c4a96 368 PIRSF PIRSF000808 1 360 4.7E-122 T 22-04-2016 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YE3226 b253853d3980d0e2b7fb91534c7ee205 2065 SMART SM00912 70 182 1.6E-38 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal YE3226 b253853d3980d0e2b7fb91534c7ee205 2065 SUPERFAMILY SSF51126 71 363 7.22E-47 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YE3226 b253853d3980d0e2b7fb91534c7ee205 2065 SMART SM00710 1854 1895 1900.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat YE3226 b253853d3980d0e2b7fb91534c7ee205 2065 SMART SM00710 1401 1425 3400.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat YE3226 b253853d3980d0e2b7fb91534c7ee205 2065 SMART SM00710 756 777 1200.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat YE3226 b253853d3980d0e2b7fb91534c7ee205 2065 SMART SM00710 780 812 3500.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat YE3226 b253853d3980d0e2b7fb91534c7ee205 2065 SMART SM00710 1679 1703 590.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat YE3226 b253853d3980d0e2b7fb91534c7ee205 2065 SMART SM00710 1764 1795 6900.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat YE3226 b253853d3980d0e2b7fb91534c7ee205 2065 SMART SM00710 626 647 660.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat YE3226 b253853d3980d0e2b7fb91534c7ee205 2065 SMART SM00710 1557 1579 5600.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat YE3226 b253853d3980d0e2b7fb91534c7ee205 2065 SMART SM00710 1825 1849 400.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat YE3226 b253853d3980d0e2b7fb91534c7ee205 2065 SMART SM00710 819 843 3000.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat YE3226 b253853d3980d0e2b7fb91534c7ee205 2065 SMART SM00710 1724 1748 2600.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat YE3226 b253853d3980d0e2b7fb91534c7ee205 2065 SMART SM00710 905 925 4900.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat YE3226 b253853d3980d0e2b7fb91534c7ee205 2065 SMART SM00710 1359 1378 9200.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat YE3226 b253853d3980d0e2b7fb91534c7ee205 2065 PANTHER PTHR12338 336 1761 6.5E-269 T 22-04-2016 YE3226 b253853d3980d0e2b7fb91534c7ee205 2065 PANTHER PTHR12338 2 307 6.5E-269 T 22-04-2016 YE3226 b253853d3980d0e2b7fb91534c7ee205 2065 PANTHER PTHR12338:SF6 336 1761 6.5E-269 T 22-04-2016 YE3226 b253853d3980d0e2b7fb91534c7ee205 2065 PANTHER PTHR12338:SF6 2 307 6.5E-269 T 22-04-2016 YE3226 b253853d3980d0e2b7fb91534c7ee205 2065 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 104 177 3.3E-25 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal YE3226 b253853d3980d0e2b7fb91534c7ee205 2065 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 25 2.9E-4 T 22-04-2016 IPR024973 ESPR domain YE3226 b253853d3980d0e2b7fb91534c7ee205 2065 Pfam PF05860 haemagglutination activity domain 81 182 5.5E-24 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal YE2804 4489e4417b7457d359c2b5ca3742660a 601 SUPERFAMILY SSF143243 31 226 8.24E-45 T 22-04-2016 YE2804 4489e4417b7457d359c2b5ca3742660a 601 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 248 259 - T 22-04-2016 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 YE2804 4489e4417b7457d359c2b5ca3742660a 601 Pfam PF00374 Nickel-dependent hydrogenase 250 318 3.4E-13 T 22-04-2016 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 YE2804 4489e4417b7457d359c2b5ca3742660a 601 PANTHER PTHR11993:SF30 157 576 1.2E-283 T 22-04-2016 YE2804 4489e4417b7457d359c2b5ca3742660a 601 SUPERFAMILY SSF56762 225 569 3.92E-108 T 22-04-2016 IPR029014 NiFe hydrogenase-like YE2804 4489e4417b7457d359c2b5ca3742660a 601 PANTHER PTHR11993 157 576 1.2E-283 T 22-04-2016 YE2804 4489e4417b7457d359c2b5ca3742660a 601 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 57 185 5.1E-21 T 22-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 YE2804 4489e4417b7457d359c2b5ca3742660a 601 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 327 497 2.2E-36 T 22-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 YE2804 4489e4417b7457d359c2b5ca3742660a 601 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 505 569 1.5E-10 T 22-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 YE2804 4489e4417b7457d359c2b5ca3742660a 601 Gene3D G3DSA:1.10.645.10 198 568 4.0E-85 T 22-04-2016 IPR029014 NiFe hydrogenase-like YE2804 4489e4417b7457d359c2b5ca3742660a 601 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 120 164 8.0E-14 T 22-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 YE3980 b08ffc8151aba78368187db3745485c6 185 ProSitePatterns PS00893 Nudix box signature. 79 100 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 YE3980 b08ffc8151aba78368187db3745485c6 185 SUPERFAMILY SSF55811 3 180 1.62E-36 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YE3980 b08ffc8151aba78368187db3745485c6 185 Gene3D G3DSA:3.90.79.10 8 181 1.9E-41 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YE3980 b08ffc8151aba78368187db3745485c6 185 PANTHER PTHR11839 1 179 9.1E-102 T 22-04-2016 YE3980 b08ffc8151aba78368187db3745485c6 185 PANTHER PTHR11839:SF12 1 179 9.1E-102 T 22-04-2016 YE3980 b08ffc8151aba78368187db3745485c6 185 Pfam PF00293 NUDIX domain 46 124 4.3E-13 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 YE2007 b715a06052a7202e7b38c9be8e6dc201 349 SUPERFAMILY SSF51735 3 198 6.4E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2007 b715a06052a7202e7b38c9be8e6dc201 349 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 121 4.8E-23 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 YE2007 b715a06052a7202e7b38c9be8e6dc201 349 Gene3D G3DSA:3.30.360.10 130 339 2.5E-29 T 22-04-2016 YE2007 b715a06052a7202e7b38c9be8e6dc201 349 PANTHER PTHR22604 1 345 2.2E-134 T 22-04-2016 YE2007 b715a06052a7202e7b38c9be8e6dc201 349 PANTHER PTHR22604:SF53 1 345 2.2E-134 T 22-04-2016 YE2007 b715a06052a7202e7b38c9be8e6dc201 349 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 134 241 6.0E-13 T 22-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 YE2007 b715a06052a7202e7b38c9be8e6dc201 349 Gene3D G3DSA:3.40.50.720 1 129 1.0E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3000 32aa3dbb463ac3696dc670b41a7886c0 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 24.917 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS YE3000 32aa3dbb463ac3696dc670b41a7886c0 105 SUPERFAMILY SSF81301 4 105 3.11E-37 T 22-04-2016 YE3000 32aa3dbb463ac3696dc670b41a7886c0 105 Pfam PF02410 Ribosomal silencing factor during starvation 10 104 6.9E-29 T 22-04-2016 YE3000 32aa3dbb463ac3696dc670b41a7886c0 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 7 104 4.4E-38 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS YE3000 32aa3dbb463ac3696dc670b41a7886c0 105 Gene3D G3DSA:3.30.460.10 4 105 4.9E-38 T 22-04-2016 YE3000 32aa3dbb463ac3696dc670b41a7886c0 105 PANTHER PTHR21043 1 105 3.9E-48 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS YE3727 e1f758b58cd8a1243716aa284533a722 657 Gene3D G3DSA:3.40.50.2300 582 644 5.4E-71 T 22-04-2016 YE3727 e1f758b58cd8a1243716aa284533a722 657 Gene3D G3DSA:3.40.50.2300 328 398 5.4E-71 T 22-04-2016 YE3727 e1f758b58cd8a1243716aa284533a722 657 Gene3D G3DSA:3.40.50.2300 256 286 5.4E-71 T 22-04-2016 YE3727 e1f758b58cd8a1243716aa284533a722 657 PANTHER PTHR38038 1 657 4.4E-215 T 22-04-2016 YE3727 e1f758b58cd8a1243716aa284533a722 657 Pfam PF04348 LppC putative lipoprotein 40 296 2.2E-54 T 22-04-2016 IPR007443 Penicillin-binding protein activator LpoA YE3727 e1f758b58cd8a1243716aa284533a722 657 Pfam PF04348 LppC putative lipoprotein 327 651 2.6E-90 T 22-04-2016 IPR007443 Penicillin-binding protein activator LpoA YE3727 e1f758b58cd8a1243716aa284533a722 657 Gene3D G3DSA:3.40.50.2300 504 581 8.4E-58 T 22-04-2016 YE3727 e1f758b58cd8a1243716aa284533a722 657 Gene3D G3DSA:3.40.50.2300 399 459 8.4E-58 T 22-04-2016 YE3727 e1f758b58cd8a1243716aa284533a722 657 SUPERFAMILY SSF53822 258 286 6.59E-78 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YE3727 e1f758b58cd8a1243716aa284533a722 657 SUPERFAMILY SSF53822 328 458 6.59E-78 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YE3727 e1f758b58cd8a1243716aa284533a722 657 SUPERFAMILY SSF53822 511 654 6.59E-78 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YE3727 e1f758b58cd8a1243716aa284533a722 657 Hamap MF_01890 Penicillin-binding protein activator LpoA [lpoA]. 6 651 37.17 T 22-04-2016 IPR007443 Penicillin-binding protein activator LpoA YE3727 e1f758b58cd8a1243716aa284533a722 657 PANTHER PTHR38038:SF1 1 657 4.4E-215 T 22-04-2016 YE3201 bcd6ea4838613156fd034fded046b3d4 419 PANTHER PTHR11063:SF8 1 419 6.0E-191 T 22-04-2016 YE3201 bcd6ea4838613156fd034fded046b3d4 419 Gene3D G3DSA:3.40.605.10 2 222 2.1E-106 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 YE3201 bcd6ea4838613156fd034fded046b3d4 419 Gene3D G3DSA:3.40.605.10 377 417 2.1E-106 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 YE3201 bcd6ea4838613156fd034fded046b3d4 419 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 3 418 40.986 T 22-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 YE3201 bcd6ea4838613156fd034fded046b3d4 419 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 11 408 5.9E-185 T 22-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 YE3201 bcd6ea4838613156fd034fded046b3d4 419 Gene3D G3DSA:3.40.309.10 225 376 7.6E-38 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 YE3201 bcd6ea4838613156fd034fded046b3d4 419 SUPERFAMILY SSF53720 3 414 4.06E-112 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 YE3201 bcd6ea4838613156fd034fded046b3d4 419 Pfam PF00171 Aldehyde dehydrogenase family 5 284 3.0E-14 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 YE3201 bcd6ea4838613156fd034fded046b3d4 419 PIRSF PIRSF000151 1 419 6.3E-172 T 22-04-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 YE3201 bcd6ea4838613156fd034fded046b3d4 419 PANTHER PTHR11063 1 419 6.0E-191 T 22-04-2016 YE3201 bcd6ea4838613156fd034fded046b3d4 419 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 325 346 - T 22-04-2016 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 YE1092 5671f9b828e923b9611127585952c296 321 Pfam PF00571 CBS domain 199 256 7.7E-7 T 22-04-2016 IPR000644 CBS domain YE1092 5671f9b828e923b9611127585952c296 321 Pfam PF00571 CBS domain 275 315 1.9E-5 T 22-04-2016 IPR000644 CBS domain YE1092 5671f9b828e923b9611127585952c296 321 PANTHER PTHR11911:SF98 35 318 2.4E-61 T 22-04-2016 YE1092 5671f9b828e923b9611127585952c296 321 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 43 311 1.1E-113 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 YE1092 5671f9b828e923b9611127585952c296 321 SMART SM00116 208 256 0.053 T 22-04-2016 IPR000644 CBS domain YE1092 5671f9b828e923b9611127585952c296 321 SMART SM00116 272 320 0.64 T 22-04-2016 IPR000644 CBS domain YE1092 5671f9b828e923b9611127585952c296 321 PANTHER PTHR11911 35 318 2.4E-61 T 22-04-2016 YE1092 5671f9b828e923b9611127585952c296 321 SUPERFAMILY SSF53697 7 256 3.34E-54 T 22-04-2016 YE1092 5671f9b828e923b9611127585952c296 321 Gene3D G3DSA:3.10.580.10 190 317 2.5E-30 T 22-04-2016 YE1092 5671f9b828e923b9611127585952c296 321 Pfam PF01380 SIS domain 38 169 4.0E-30 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 YE1092 5671f9b828e923b9611127585952c296 321 SUPERFAMILY SSF54631 262 318 1.87E-7 T 22-04-2016 YE1092 5671f9b828e923b9611127585952c296 321 PIRSF PIRSF004692 1 321 2.9E-118 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 YE1092 5671f9b828e923b9611127585952c296 321 Gene3D G3DSA:3.40.50.10490 9 189 5.1E-42 T 22-04-2016 YE2459 a95e2f0804be02e5f2a2f06ce62e9e75 456 Pfam PF01979 Amidohydrolase family 48 429 9.6E-34 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 YE2459 a95e2f0804be02e5f2a2f06ce62e9e75 456 SUPERFAMILY SSF51556 50 353 2.51E-72 T 22-04-2016 IPR032466 Metal-dependent hydrolase YE2459 a95e2f0804be02e5f2a2f06ce62e9e75 456 Gene3D G3DSA:3.20.20.140 54 396 1.3E-76 T 22-04-2016 YE2459 a95e2f0804be02e5f2a2f06ce62e9e75 456 PANTHER PTHR11271:SF4 15 454 5.1E-207 T 22-04-2016 IPR010252 Formiminoglutamate deiminase YE2459 a95e2f0804be02e5f2a2f06ce62e9e75 456 TIGRFAM TIGR02022 hutF: formiminoglutamate deiminase 1 453 8.4E-223 T 22-04-2016 IPR010252 Formiminoglutamate deiminase YE2459 a95e2f0804be02e5f2a2f06ce62e9e75 456 SUPERFAMILY SSF51338 378 436 6.48E-6 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YE2459 a95e2f0804be02e5f2a2f06ce62e9e75 456 PANTHER PTHR11271 15 454 5.1E-207 T 22-04-2016 YE2818 b845fb8243df0b774f71e9802eb0616c 220 Pfam PF01227 GTP cyclohydrolase I 38 216 3.7E-63 T 22-04-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 YE2818 b845fb8243df0b774f71e9802eb0616c 220 SUPERFAMILY SSF55620 5 219 8.89E-75 T 22-04-2016 YE2818 b845fb8243df0b774f71e9802eb0616c 220 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 38 218 1.8E-85 T 22-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 YE2818 b845fb8243df0b774f71e9802eb0616c 220 PANTHER PTHR11109 1 220 2.0E-106 T 22-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 YE2818 b845fb8243df0b774f71e9802eb0616c 220 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 34 217 34.139 T 22-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 YE2818 b845fb8243df0b774f71e9802eb0616c 220 Gene3D G3DSA:3.30.1130.10 90 218 3.9E-51 T 22-04-2016 YE2818 b845fb8243df0b774f71e9802eb0616c 220 Gene3D G3DSA:1.10.286.10 4 84 1.4E-31 T 22-04-2016 YE2818 b845fb8243df0b774f71e9802eb0616c 220 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 96 112 - T 22-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 YE2818 b845fb8243df0b774f71e9802eb0616c 220 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 144 154 - T 22-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 YE2971 a10c1960e94b866b703bedba5138eac9 552 Pfam PF02203 Tar ligand binding domain homologue 3 174 6.5E-12 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 YE2971 a10c1960e94b866b703bedba5138eac9 552 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 294 316 - T 22-04-2016 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site YE2971 a10c1960e94b866b703bedba5138eac9 552 PANTHER PTHR32089:SF48 117 163 2.4E-174 T 22-04-2016 YE2971 a10c1960e94b866b703bedba5138eac9 552 PANTHER PTHR32089:SF48 190 519 2.4E-174 T 22-04-2016 YE2971 a10c1960e94b866b703bedba5138eac9 552 SMART SM00283 269 516 7.8E-91 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 YE2971 a10c1960e94b866b703bedba5138eac9 552 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 328 515 8.8E-61 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 YE2971 a10c1960e94b866b703bedba5138eac9 552 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 1.4E-61 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE2971 a10c1960e94b866b703bedba5138eac9 552 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 1.4E-61 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE2971 a10c1960e94b866b703bedba5138eac9 552 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 7 32 1.4E-61 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE2971 a10c1960e94b866b703bedba5138eac9 552 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 394 1.4E-61 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE2971 a10c1960e94b866b703bedba5138eac9 552 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 1.4E-61 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE2971 a10c1960e94b866b703bedba5138eac9 552 SUPERFAMILY SSF58104 240 523 1.96E-70 T 22-04-2016 YE2971 a10c1960e94b866b703bedba5138eac9 552 PANTHER PTHR32089 117 163 2.4E-174 T 22-04-2016 YE2971 a10c1960e94b866b703bedba5138eac9 552 PANTHER PTHR32089 190 519 2.4E-174 T 22-04-2016 YE2971 a10c1960e94b866b703bedba5138eac9 552 Gene3D G3DSA:1.10.287.950 284 488 3.4E-61 T 22-04-2016 YE0681 3ae37c83710fd7d522f94957244f43db 904 ProSitePatterns PS01312 SecA family signature. 500 515 - T 22-04-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 YE0681 3ae37c83710fd7d522f94957244f43db 904 Pfam PF01043 SecA preprotein cross-linking domain 232 358 1.0E-39 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 YE0681 3ae37c83710fd7d522f94957244f43db 904 SUPERFAMILY SSF81886 880 892 6.67E-83 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 YE0681 3ae37c83710fd7d522f94957244f43db 904 SUPERFAMILY SSF81886 620 840 6.67E-83 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 YE0681 3ae37c83710fd7d522f94957244f43db 904 SMART SM00957 6 402 0.0 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 YE0681 3ae37c83710fd7d522f94957244f43db 904 SUPERFAMILY SSF81767 227 368 3.79E-45 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 YE0681 3ae37c83710fd7d522f94957244f43db 904 Pfam PF02810 SEC-C motif 884 902 9.9E-11 T 22-04-2016 IPR004027 SEC-C motif YE0681 3ae37c83710fd7d522f94957244f43db 904 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 19.917 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 YE0681 3ae37c83710fd7d522f94957244f43db 904 SUPERFAMILY SSF52540 368 415 1.19E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0681 3ae37c83710fd7d522f94957244f43db 904 SUPERFAMILY SSF52540 5 228 1.19E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0681 3ae37c83710fd7d522f94957244f43db 904 SMART SM00958 228 358 7.8E-86 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 YE0681 3ae37c83710fd7d522f94957244f43db 904 Pfam PF07517 SecA DEAD-like domain 7 402 1.9E-131 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 YE0681 3ae37c83710fd7d522f94957244f43db 904 Gene3D G3DSA:3.40.50.300 369 416 6.9E-124 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0681 3ae37c83710fd7d522f94957244f43db 904 Gene3D G3DSA:3.40.50.300 2 228 6.9E-124 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0681 3ae37c83710fd7d522f94957244f43db 904 Pfam PF07516 SecA Wing and Scaffold domain 617 830 5.6E-68 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 YE0681 3ae37c83710fd7d522f94957244f43db 904 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 817 0.0 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 YE0681 3ae37c83710fd7d522f94957244f43db 904 Gene3D G3DSA:3.40.50.300 417 619 1.1E-87 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0681 3ae37c83710fd7d522f94957244f43db 904 PANTHER PTHR30612 1 520 0.0 T 22-04-2016 YE0681 3ae37c83710fd7d522f94957244f43db 904 PANTHER PTHR30612 550 904 0.0 T 22-04-2016 YE0681 3ae37c83710fd7d522f94957244f43db 904 Gene3D G3DSA:1.10.3060.10 648 831 4.6E-58 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 YE0681 3ae37c83710fd7d522f94957244f43db 904 PRINTS PR00906 SecA protein signature 339 361 1.4E-73 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 YE0681 3ae37c83710fd7d522f94957244f43db 904 PRINTS PR00906 SecA protein signature 63 87 1.4E-73 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 YE0681 3ae37c83710fd7d522f94957244f43db 904 PRINTS PR00906 SecA protein signature 170 190 1.4E-73 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 YE0681 3ae37c83710fd7d522f94957244f43db 904 PRINTS PR00906 SecA protein signature 101 115 1.4E-73 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 YE0681 3ae37c83710fd7d522f94957244f43db 904 PRINTS PR00906 SecA protein signature 413 426 1.4E-73 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 YE0681 3ae37c83710fd7d522f94957244f43db 904 PRINTS PR00906 SecA protein signature 117 127 1.4E-73 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 YE0681 3ae37c83710fd7d522f94957244f43db 904 PRINTS PR00906 SecA protein signature 376 393 1.4E-73 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 YE0681 3ae37c83710fd7d522f94957244f43db 904 SUPERFAMILY SSF52540 416 618 3.77E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0681 3ae37c83710fd7d522f94957244f43db 904 Gene3D G3DSA:3.90.1440.10 230 368 3.2E-47 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 YE1067 c3f694f97a3090e96d19bfe415bf72dc 779 Gene3D G3DSA:3.40.710.10 233 623 4.8E-71 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YE1067 c3f694f97a3090e96d19bfe415bf72dc 779 Pfam PF00905 Penicillin binding protein transpeptidase domain 307 425 2.5E-10 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 YE1067 c3f694f97a3090e96d19bfe415bf72dc 779 SUPERFAMILY SSF56601 211 646 5.23E-93 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YE1067 c3f694f97a3090e96d19bfe415bf72dc 779 PANTHER PTHR32282 7 682 6.7E-198 T 22-04-2016 YE1067 c3f694f97a3090e96d19bfe415bf72dc 779 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 695 773 5.5E-17 T 22-04-2016 IPR009647 Penicillin-binding, C-terminal KEGG: 00230+2.4.2.-|KEGG: 00514+2.4.2.-|UniPathway: UPA00219 YE1067 c3f694f97a3090e96d19bfe415bf72dc 779 Pfam PF00912 Transglycosylase 63 229 1.3E-50 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 YE1067 c3f694f97a3090e96d19bfe415bf72dc 779 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 41 779 5.0E-247 T 22-04-2016 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 KEGG: 00230+2.4.2.-|KEGG: 00514+2.4.2.-|UniPathway: UPA00219 YE1067 c3f694f97a3090e96d19bfe415bf72dc 779 PANTHER PTHR32282:SF0 7 682 6.7E-198 T 22-04-2016 YE1067 c3f694f97a3090e96d19bfe415bf72dc 779 SUPERFAMILY SSF53955 42 262 9.56E-65 T 22-04-2016 IPR023346 Lysozyme-like domain YE1067 c3f694f97a3090e96d19bfe415bf72dc 779 Gene3D G3DSA:1.10.3810.10 62 232 5.2E-53 T 22-04-2016 YE1348 b334e1890f32c12fffc000bd2e6e5e44 456 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 61 233 3.3E-50 T 22-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain YE1348 b334e1890f32c12fffc000bd2e6e5e44 456 PANTHER PTHR11780 13 434 3.2E-219 T 22-04-2016 YE1348 b334e1890f32c12fffc000bd2e6e5e44 456 SUPERFAMILY SSF142984 257 339 6.15E-22 T 22-04-2016 YE1348 b334e1890f32c12fffc000bd2e6e5e44 456 SUPERFAMILY SSF142019 23 252 1.96E-84 T 22-04-2016 YE1348 b334e1890f32c12fffc000bd2e6e5e44 456 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 181 196 - T 22-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 YE1348 b334e1890f32c12fffc000bd2e6e5e44 456 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 348 430 3.3E-26 T 22-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 YE1348 b334e1890f32c12fffc000bd2e6e5e44 456 SMART SM00928 345 390 2.0E-21 T 22-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 YE1348 b334e1890f32c12fffc000bd2e6e5e44 456 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 358 369 - T 22-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 YE1348 b334e1890f32c12fffc000bd2e6e5e44 456 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 20 432 1.3E-199 T 22-04-2016 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 YE1348 b334e1890f32c12fffc000bd2e6e5e44 456 SUPERFAMILY SSF140490 343 434 6.28E-31 T 22-04-2016 YE1701 f4ccfeb13a8439104175a2d083b2f16c 117 PRINTS PR00332 Histidine triad family signature 27 45 3.9E-19 T 22-04-2016 IPR001310 Histidine triad (HIT) protein YE1701 f4ccfeb13a8439104175a2d083b2f16c 117 PRINTS PR00332 Histidine triad family signature 95 105 3.9E-19 T 22-04-2016 IPR001310 Histidine triad (HIT) protein YE1701 f4ccfeb13a8439104175a2d083b2f16c 117 PRINTS PR00332 Histidine triad family signature 6 22 3.9E-19 T 22-04-2016 IPR001310 Histidine triad (HIT) protein YE1701 f4ccfeb13a8439104175a2d083b2f16c 117 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 22-04-2016 IPR019808 Histidine triad, conserved site YE1701 f4ccfeb13a8439104175a2d083b2f16c 117 PANTHER PTHR23089 2 112 5.5E-50 T 22-04-2016 IPR001310 Histidine triad (HIT) protein YE1701 f4ccfeb13a8439104175a2d083b2f16c 117 SUPERFAMILY SSF54197 2 111 1.08E-35 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 YE1701 f4ccfeb13a8439104175a2d083b2f16c 117 Pfam PF01230 HIT domain 12 109 3.9E-30 T 22-04-2016 IPR001310 Histidine triad (HIT) protein YE1701 f4ccfeb13a8439104175a2d083b2f16c 117 Gene3D G3DSA:3.30.428.10 3 110 4.8E-38 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 YE1701 f4ccfeb13a8439104175a2d083b2f16c 117 PANTHER PTHR23089:SF2 2 112 5.5E-50 T 22-04-2016 YE0383 46c924b785e0ecc60c327b1a5f4feea6 141 Pfam PF02082 Transcriptional regulator 2 82 2.3E-24 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type YE0383 46c924b785e0ecc60c327b1a5f4feea6 141 PANTHER PTHR33221:SF4 2 141 1.7E-81 T 22-04-2016 YE0383 46c924b785e0ecc60c327b1a5f4feea6 141 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 22-04-2016 IPR030489 Transcription regulator Rrf2-type, conserved site YE0383 46c924b785e0ecc60c327b1a5f4feea6 141 Gene3D G3DSA:1.10.10.10 2 132 6.5E-40 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0383 46c924b785e0ecc60c327b1a5f4feea6 141 SUPERFAMILY SSF46785 2 131 1.44E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0383 46c924b785e0ecc60c327b1a5f4feea6 141 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 2 128 1.7E-36 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type YE0383 46c924b785e0ecc60c327b1a5f4feea6 141 Hamap MF_01177 HTH-type transcriptional repressor NsrR [nsrR]. 1 141 45.932 T 22-04-2016 IPR023761 Transcriptional repressor HTH, NsrR GO:0045892 YE0383 46c924b785e0ecc60c327b1a5f4feea6 141 PANTHER PTHR33221 2 141 1.7E-81 T 22-04-2016 YE2681 1ad2bd6e43333b92a56ffdd767a48fa0 159 Pfam PF04965 Gene 25-like lysozyme 36 136 1.8E-17 T 22-04-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD YE2681 1ad2bd6e43333b92a56ffdd767a48fa0 159 PANTHER PTHR38595:SF1 1 159 2.1E-80 T 22-04-2016 YE2681 1ad2bd6e43333b92a56ffdd767a48fa0 159 SUPERFAMILY SSF160719 72 144 7.19E-12 T 22-04-2016 YE2681 1ad2bd6e43333b92a56ffdd767a48fa0 159 Gene3D G3DSA:3.10.450.40 73 130 8.1E-5 T 22-04-2016 YE2681 1ad2bd6e43333b92a56ffdd767a48fa0 159 PANTHER PTHR38595 1 159 2.1E-80 T 22-04-2016 YE3443 4917dbf40e95329fa45a0a942c5d51e7 362 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 192 208 - T 22-04-2016 IPR004035 Endonuclease III, iron-sulphur binding site YE3443 4917dbf40e95329fa45a0a942c5d51e7 362 Pfam PF14815 NUDIX domain 234 341 3.5E-22 T 22-04-2016 IPR029119 MutY, C-terminal YE3443 4917dbf40e95329fa45a0a942c5d51e7 362 SUPERFAMILY SSF48150 2 225 1.15E-78 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 YE3443 4917dbf40e95329fa45a0a942c5d51e7 362 Gene3D G3DSA:1.10.1670.10 123 224 5.7E-40 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal YE3443 4917dbf40e95329fa45a0a942c5d51e7 362 SMART SM00478 39 190 7.5E-53 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 YE3443 4917dbf40e95329fa45a0a942c5d51e7 362 Gene3D G3DSA:1.10.340.30 22 122 1.5E-45 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 YE3443 4917dbf40e95329fa45a0a942c5d51e7 362 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 22-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 YE3443 4917dbf40e95329fa45a0a942c5d51e7 362 Gene3D G3DSA:3.90.79.10 229 346 2.3E-21 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YE3443 4917dbf40e95329fa45a0a942c5d51e7 362 SMART SM00525 191 211 7.6E-5 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 YE3443 4917dbf40e95329fa45a0a942c5d51e7 362 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 5 276 5.4E-123 T 22-04-2016 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 YE3443 4917dbf40e95329fa45a0a942c5d51e7 362 SUPERFAMILY SSF55811 220 344 9.33E-24 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YE3443 4917dbf40e95329fa45a0a942c5d51e7 362 PANTHER PTHR10359 10 341 2.0E-112 T 22-04-2016 YE3443 4917dbf40e95329fa45a0a942c5d51e7 362 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 192 208 5.8E-4 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 YE3443 4917dbf40e95329fa45a0a942c5d51e7 362 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 36 167 6.0E-20 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 YE3443 4917dbf40e95329fa45a0a942c5d51e7 362 Pfam PF00633 Helix-hairpin-helix motif 99 127 1.9E-9 T 22-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 YE0782 8ecfed3f4ebf47adb2afd1d44e7129fe 255 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 176 237 3.7E-16 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YE0782 8ecfed3f4ebf47adb2afd1d44e7129fe 255 PANTHER PTHR30251:SF6 4 246 1.1E-116 T 22-04-2016 YE0782 8ecfed3f4ebf47adb2afd1d44e7129fe 255 PANTHER PTHR30251 4 246 1.1E-116 T 22-04-2016 YE0782 8ecfed3f4ebf47adb2afd1d44e7129fe 255 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 108 125 - T 22-04-2016 IPR018046 Pili assembly chaperone, conserved site YE0782 8ecfed3f4ebf47adb2afd1d44e7129fe 255 SUPERFAMILY SSF49584 160 249 6.02E-24 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YE0782 8ecfed3f4ebf47adb2afd1d44e7129fe 255 Gene3D G3DSA:2.60.40.1070 158 249 6.3E-28 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YE0782 8ecfed3f4ebf47adb2afd1d44e7129fe 255 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 33 150 2.1E-35 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 YE0782 8ecfed3f4ebf47adb2afd1d44e7129fe 255 PRINTS PR00969 Pili chaperone signature 33 42 1.4E-30 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YE0782 8ecfed3f4ebf47adb2afd1d44e7129fe 255 PRINTS PR00969 Pili chaperone signature 79 100 1.4E-30 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YE0782 8ecfed3f4ebf47adb2afd1d44e7129fe 255 PRINTS PR00969 Pili chaperone signature 109 126 1.4E-30 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YE0782 8ecfed3f4ebf47adb2afd1d44e7129fe 255 PRINTS PR00969 Pili chaperone signature 132 147 1.4E-30 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YE0782 8ecfed3f4ebf47adb2afd1d44e7129fe 255 PRINTS PR00969 Pili chaperone signature 171 186 1.4E-30 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YE0782 8ecfed3f4ebf47adb2afd1d44e7129fe 255 SUPERFAMILY SSF49354 28 150 3.4E-37 T 22-04-2016 IPR008962 PapD-like YE0782 8ecfed3f4ebf47adb2afd1d44e7129fe 255 Gene3D G3DSA:2.60.40.360 33 150 1.2E-42 T 22-04-2016 IPR008962 PapD-like YE2923 a9c65f380d4c8c54b64cb542334e6411 283 SMART SM00477 63 264 2.6E-41 T 22-04-2016 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 YE2923 a9c65f380d4c8c54b64cb542334e6411 283 SUPERFAMILY SSF54060 46 267 3.0E-46 T 22-04-2016 YE2923 a9c65f380d4c8c54b64cb542334e6411 283 SMART SM00892 62 264 1.5E-42 T 22-04-2016 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 YE2923 a9c65f380d4c8c54b64cb542334e6411 283 Pfam PF01223 DNA/RNA non-specific endonuclease 47 263 2.5E-43 T 22-04-2016 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 YE2923 a9c65f380d4c8c54b64cb542334e6411 283 PANTHER PTHR13966 50 256 8.3E-30 T 22-04-2016 YE2923 a9c65f380d4c8c54b64cb542334e6411 283 Gene3D G3DSA:3.40.570.10 47 276 8.1E-51 T 22-04-2016 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 YE0756 18f8128ba9fb50ebfc98a3b2be4abbe6 576 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 10 571 58.489 T 22-04-2016 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YE0756 18f8128ba9fb50ebfc98a3b2be4abbe6 576 PRINTS PR00397 Sirohaem Fe-binding site signature 430 448 4.1E-8 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YE0756 18f8128ba9fb50ebfc98a3b2be4abbe6 576 PRINTS PR00397 Sirohaem Fe-binding site signature 478 496 4.1E-8 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YE0756 18f8128ba9fb50ebfc98a3b2be4abbe6 576 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 353 417 9.8E-15 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YE0756 18f8128ba9fb50ebfc98a3b2be4abbe6 576 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 80 139 6.0E-13 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YE0756 18f8128ba9fb50ebfc98a3b2be4abbe6 576 Gene3D G3DSA:3.30.413.10 150 339 5.2E-69 T 22-04-2016 YE0756 18f8128ba9fb50ebfc98a3b2be4abbe6 576 Gene3D G3DSA:3.30.413.10 431 558 3.0E-35 T 22-04-2016 YE0756 18f8128ba9fb50ebfc98a3b2be4abbe6 576 PANTHER PTHR11493 1 560 6.6E-278 T 22-04-2016 YE0756 18f8128ba9fb50ebfc98a3b2be4abbe6 576 PANTHER PTHR11493:SF47 1 560 6.6E-278 T 22-04-2016 YE0756 18f8128ba9fb50ebfc98a3b2be4abbe6 576 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 19 559 8.3E-289 T 22-04-2016 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YE0756 18f8128ba9fb50ebfc98a3b2be4abbe6 576 SUPERFAMILY SSF55124 346 422 9.49E-22 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YE0756 18f8128ba9fb50ebfc98a3b2be4abbe6 576 Gene3D G3DSA:3.90.480.10 74 146 2.1E-63 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YE0756 18f8128ba9fb50ebfc98a3b2be4abbe6 576 Gene3D G3DSA:3.90.480.10 342 422 2.1E-63 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YE0756 18f8128ba9fb50ebfc98a3b2be4abbe6 576 SUPERFAMILY SSF55124 12 142 8.67E-26 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YE0756 18f8128ba9fb50ebfc98a3b2be4abbe6 576 SUPERFAMILY SSF56014 150 344 1.27E-58 T 22-04-2016 YE0756 18f8128ba9fb50ebfc98a3b2be4abbe6 576 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 173 329 1.1E-45 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YE0756 18f8128ba9fb50ebfc98a3b2be4abbe6 576 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 431 558 3.9E-6 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YE0756 18f8128ba9fb50ebfc98a3b2be4abbe6 576 SUPERFAMILY SSF56014 429 561 2.49E-36 T 22-04-2016 YE0756 18f8128ba9fb50ebfc98a3b2be4abbe6 576 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 478 494 - T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YE1207 337ac4fe715ee06b689cfeed86da94bd 85 PANTHER PTHR33705:SF1 1 84 2.5E-39 T 22-04-2016 YE1207 337ac4fe715ee06b689cfeed86da94bd 85 Gene3D G3DSA:3.30.1340.10 1 83 2.9E-33 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YE1207 337ac4fe715ee06b689cfeed86da94bd 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 4.2E-31 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YE1207 337ac4fe715ee06b689cfeed86da94bd 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 22-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site YE1207 337ac4fe715ee06b689cfeed86da94bd 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 2.5E-20 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YE1207 337ac4fe715ee06b689cfeed86da94bd 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.5E-20 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YE1207 337ac4fe715ee06b689cfeed86da94bd 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 2.5E-20 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YE1207 337ac4fe715ee06b689cfeed86da94bd 85 SUPERFAMILY SSF55594 1 82 1.83E-27 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YE1207 337ac4fe715ee06b689cfeed86da94bd 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site YE1207 337ac4fe715ee06b689cfeed86da94bd 85 PANTHER PTHR33705 1 84 2.5E-39 T 22-04-2016 YE1207 337ac4fe715ee06b689cfeed86da94bd 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 1.5E-27 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YE0232 387117f750d102ea696d0730f6c0e45b 428 PANTHER PTHR30482 59 428 1.1E-223 T 22-04-2016 YE0232 387117f750d102ea696d0730f6c0e45b 428 Pfam PF02653 Branched-chain amino acid transport system / permease component 113 398 1.2E-56 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YE0232 387117f750d102ea696d0730f6c0e45b 428 PANTHER PTHR30482:SF9 59 428 1.1E-223 T 22-04-2016 YE0232 387117f750d102ea696d0730f6c0e45b 428 Pfam PF11862 Domain of unknown function (DUF3382) 5 103 1.0E-25 T 22-04-2016 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal YE0918 e8337b5ae098aaf95bbb5b60f5d4f522 476 SUPERFAMILY SSF54106 368 411 3.79E-10 T 22-04-2016 IPR018392 LysM domain YE0918 e8337b5ae098aaf95bbb5b60f5d4f522 476 Pfam PF01476 LysM domain 369 410 3.0E-11 T 22-04-2016 IPR018392 LysM domain YE0918 e8337b5ae098aaf95bbb5b60f5d4f522 476 Pfam PF01476 LysM domain 423 465 8.8E-7 T 22-04-2016 IPR018392 LysM domain YE0918 e8337b5ae098aaf95bbb5b60f5d4f522 476 PANTHER PTHR21666 40 451 2.0E-184 T 22-04-2016 YE0918 e8337b5ae098aaf95bbb5b60f5d4f522 476 PANTHER PTHR21666:SF206 40 451 2.0E-184 T 22-04-2016 YE0918 e8337b5ae098aaf95bbb5b60f5d4f522 476 Pfam PF01464 Transglycosylase SLT domain 128 236 6.4E-28 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 YE0918 e8337b5ae098aaf95bbb5b60f5d4f522 476 Gene3D G3DSA:1.10.530.10 119 278 4.3E-47 T 22-04-2016 YE0918 e8337b5ae098aaf95bbb5b60f5d4f522 476 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 143 171 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 YE0918 e8337b5ae098aaf95bbb5b60f5d4f522 476 SMART SM00257 368 412 6.3E-13 T 22-04-2016 IPR018392 LysM domain YE0918 e8337b5ae098aaf95bbb5b60f5d4f522 476 SMART SM00257 422 467 8.2E-8 T 22-04-2016 IPR018392 LysM domain YE0918 e8337b5ae098aaf95bbb5b60f5d4f522 476 SUPERFAMILY SSF53955 121 273 1.03E-40 T 22-04-2016 IPR023346 Lysozyme-like domain YE0918 e8337b5ae098aaf95bbb5b60f5d4f522 476 SUPERFAMILY SSF54106 420 467 2.22E-9 T 22-04-2016 IPR018392 LysM domain YE0918 e8337b5ae098aaf95bbb5b60f5d4f522 476 Gene3D G3DSA:3.10.350.10 367 411 1.4E-16 T 22-04-2016 IPR018392 LysM domain YE0918 e8337b5ae098aaf95bbb5b60f5d4f522 476 Gene3D G3DSA:3.10.350.10 420 467 9.2E-15 T 22-04-2016 IPR018392 LysM domain YE1950 2f7d0ef0d5378228abdd284b973b6604 367 Pfam PF00296 Luciferase-like monooxygenase 1 319 8.9E-69 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 YE1950 2f7d0ef0d5378228abdd284b973b6604 367 Gene3D G3DSA:3.20.20.30 1 352 3.9E-84 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 YE1950 2f7d0ef0d5378228abdd284b973b6604 367 SUPERFAMILY SSF51679 1 352 3.24E-76 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 YE1950 2f7d0ef0d5378228abdd284b973b6604 367 Hamap MF_01699 Pyrimidine monooxygenase RutA [rutA]. 1 360 69.419 T 22-04-2016 IPR019914 Pyrimidine monooxygenase RutA GO:0004497|GO:0006212|GO:0055114 KEGG: 00240+1.14.99.46 YE1950 2f7d0ef0d5378228abdd284b973b6604 367 PANTHER PTHR30011:SF1 1 360 3.4E-141 T 22-04-2016 YE1950 2f7d0ef0d5378228abdd284b973b6604 367 TIGRFAM TIGR03612 RutA: pyrimidine utilization protein A 1 355 2.1E-214 T 22-04-2016 IPR019914 Pyrimidine monooxygenase RutA GO:0004497|GO:0006212|GO:0055114 KEGG: 00240+1.14.99.46 YE1950 2f7d0ef0d5378228abdd284b973b6604 367 PANTHER PTHR30011 1 360 3.4E-141 T 22-04-2016 YE2044 f55db5978193d2c8df7589d35042e783 257 PANTHER PTHR18966 24 250 1.9E-61 T 22-04-2016 YE2044 f55db5978193d2c8df7589d35042e783 257 Gene3D G3DSA:3.40.190.10 24 111 7.1E-44 T 22-04-2016 YE2044 f55db5978193d2c8df7589d35042e783 257 Gene3D G3DSA:3.40.190.10 212 254 7.1E-44 T 22-04-2016 YE2044 f55db5978193d2c8df7589d35042e783 257 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 26 251 1.7E-62 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YE2044 f55db5978193d2c8df7589d35042e783 257 Gene3D G3DSA:3.40.190.10 112 209 2.2E-28 T 22-04-2016 YE2044 f55db5978193d2c8df7589d35042e783 257 PANTHER PTHR18966:SF152 24 250 1.9E-61 T 22-04-2016 YE2044 f55db5978193d2c8df7589d35042e783 257 SUPERFAMILY SSF53850 1 254 5.43E-67 T 22-04-2016 YE2044 f55db5978193d2c8df7589d35042e783 257 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 48 61 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 YE2044 f55db5978193d2c8df7589d35042e783 257 SMART SM00062 25 253 1.9E-70 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YE1602 d6a6f324a999409f0b9224c30f90edf3 575 Gene3D G3DSA:3.30.70.1450 421 483 2.1E-7 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YE1602 d6a6f324a999409f0b9224c30f90edf3 575 Gene3D G3DSA:3.30.465.10 497 570 4.0E-14 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 YE1602 d6a6f324a999409f0b9224c30f90edf3 575 PANTHER PTHR32507 1 575 1.1E-280 T 22-04-2016 YE1602 d6a6f324a999409f0b9224c30f90edf3 575 Pfam PF02080 TrkA-C domain 420 483 2.7E-12 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YE1602 d6a6f324a999409f0b9224c30f90edf3 575 PANTHER PTHR32507:SF7 1 575 1.1E-280 T 22-04-2016 IPR030151 K(+)/H(+) antiporter NhaP GO:0005451|GO:0006813|GO:0016021 YE1602 d6a6f324a999409f0b9224c30f90edf3 575 SMART SM01091 492 572 1.9E-22 T 22-04-2016 IPR005170 Transporter-associated domain YE1602 d6a6f324a999409f0b9224c30f90edf3 575 SUPERFAMILY SSF56176 497 570 2.34E-13 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 YE1602 d6a6f324a999409f0b9224c30f90edf3 575 Pfam PF03471 Transporter associated domain 493 570 1.8E-15 T 22-04-2016 IPR005170 Transporter-associated domain YE1602 d6a6f324a999409f0b9224c30f90edf3 575 SUPERFAMILY SSF116726 419 483 3.01E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YE1602 d6a6f324a999409f0b9224c30f90edf3 575 Pfam PF00999 Sodium/hydrogen exchanger family 15 387 3.3E-57 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 YE1602 d6a6f324a999409f0b9224c30f90edf3 575 Hamap MF_01075 K(+)/H(+) antiporter NhaP2 [nhaP2]. 1 575 49.466 T 22-04-2016 IPR023729 K(+)/H(+) antiporter NhaP2 GO:0005451|GO:0006812|GO:0006813|GO:0006884|GO:0016021 YE1448 ced12da2fbb2372a99de8db70e6beb6d 312 SUPERFAMILY SSF53613 7 306 2.65E-66 T 22-04-2016 IPR029056 Ribokinase-like YE1448 ced12da2fbb2372a99de8db70e6beb6d 312 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 5 308 4.3E-100 T 22-04-2016 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 YE1448 ced12da2fbb2372a99de8db70e6beb6d 312 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 5 308 1.8E-98 T 22-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 YE1448 ced12da2fbb2372a99de8db70e6beb6d 312 PIRSF PIRSF000535 2 311 7.4E-115 T 22-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 YE1448 ced12da2fbb2372a99de8db70e6beb6d 312 PANTHER PTHR10584:SF170 1 308 6.5E-127 T 22-04-2016 YE1448 ced12da2fbb2372a99de8db70e6beb6d 312 Pfam PF00294 pfkB family carbohydrate kinase 14 293 1.5E-62 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB YE1448 ced12da2fbb2372a99de8db70e6beb6d 312 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 39 63 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 YE1448 ced12da2fbb2372a99de8db70e6beb6d 312 Gene3D G3DSA:3.40.1190.20 37 309 2.1E-83 T 22-04-2016 IPR029056 Ribokinase-like YE1448 ced12da2fbb2372a99de8db70e6beb6d 312 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 249 262 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 YE1448 ced12da2fbb2372a99de8db70e6beb6d 312 PANTHER PTHR10584 1 308 6.5E-127 T 22-04-2016 YE2270 680c1f7ebc7aad3a9688567d44612fd5 397 Pfam PF01609 Transposase DDE domain 104 323 4.6E-20 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 YE2270 680c1f7ebc7aad3a9688567d44612fd5 397 SUPERFAMILY SSF53098 14 371 3.11E-38 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE2270 680c1f7ebc7aad3a9688567d44612fd5 397 PANTHER PTHR35404 2 397 2.1E-70 T 22-04-2016 YE2040 7c086f71c3ede3e3988cc4b0962058c1 151 Pfam PF13412 Winged helix-turn-helix DNA-binding 7 54 4.2E-16 T 22-04-2016 YE2040 7c086f71c3ede3e3988cc4b0962058c1 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 53 7.0E-15 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 YE2040 7c086f71c3ede3e3988cc4b0962058c1 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 7 23 7.0E-15 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 YE2040 7c086f71c3ede3e3988cc4b0962058c1 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 34 7.0E-15 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 YE2040 7c086f71c3ede3e3988cc4b0962058c1 151 PANTHER PTHR30154:SF28 1 131 9.0E-38 T 22-04-2016 YE2040 7c086f71c3ede3e3988cc4b0962058c1 151 SUPERFAMILY SSF54909 73 149 1.34E-12 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel YE2040 7c086f71c3ede3e3988cc4b0962058c1 151 Pfam PF01037 Lrp/AsnC ligand binding domain 81 131 9.1E-12 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain YE2040 7c086f71c3ede3e3988cc4b0962058c1 151 SMART SM00344 7 115 1.9E-26 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 YE2040 7c086f71c3ede3e3988cc4b0962058c1 151 Gene3D G3DSA:1.10.10.10 6 58 9.3E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2040 7c086f71c3ede3e3988cc4b0962058c1 151 SUPERFAMILY SSF46785 6 61 6.52E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2040 7c086f71c3ede3e3988cc4b0962058c1 151 PANTHER PTHR30154 1 131 9.0E-38 T 22-04-2016 YE2040 7c086f71c3ede3e3988cc4b0962058c1 151 Gene3D G3DSA:3.30.70.920 71 132 3.8E-13 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain YE4037 dd44a5c2ba2b93a335782a2e5bb2b86b 306 SUPERFAMILY SSF46785 3 83 3.25E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE4037 dd44a5c2ba2b93a335782a2e5bb2b86b 306 PANTHER PTHR30537:SF15 1 299 8.4E-75 T 22-04-2016 YE4037 dd44a5c2ba2b93a335782a2e5bb2b86b 306 Gene3D G3DSA:3.40.190.10 92 169 4.9E-11 T 22-04-2016 YE4037 dd44a5c2ba2b93a335782a2e5bb2b86b 306 SUPERFAMILY SSF53850 94 297 8.32E-28 T 22-04-2016 YE4037 dd44a5c2ba2b93a335782a2e5bb2b86b 306 Gene3D G3DSA:3.40.190.10 170 265 1.9E-29 T 22-04-2016 YE4037 dd44a5c2ba2b93a335782a2e5bb2b86b 306 PANTHER PTHR30537 1 299 8.4E-75 T 22-04-2016 YE4037 dd44a5c2ba2b93a335782a2e5bb2b86b 306 Pfam PF03466 LysR substrate binding domain 92 293 3.0E-29 T 22-04-2016 IPR005119 LysR, substrate-binding YE4037 dd44a5c2ba2b93a335782a2e5bb2b86b 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.7E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE4037 dd44a5c2ba2b93a335782a2e5bb2b86b 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.7E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE4037 dd44a5c2ba2b93a335782a2e5bb2b86b 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.7E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE4037 dd44a5c2ba2b93a335782a2e5bb2b86b 306 Gene3D G3DSA:1.10.10.10 3 85 6.9E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE4037 dd44a5c2ba2b93a335782a2e5bb2b86b 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 5.0E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE3437 f7645c7700b4c90f354a6084549b7b41 197 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 194 2.9E-68 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 YE3437 f7645c7700b4c90f354a6084549b7b41 197 SUPERFAMILY SSF52972 1 196 2.01E-74 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like YE3437 f7645c7700b4c90f354a6084549b7b41 197 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 2 196 50.628 T 22-04-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 YE3437 f7645c7700b4c90f354a6084549b7b41 197 Gene3D G3DSA:3.90.950.10 1 196 2.1E-83 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like YE3437 f7645c7700b4c90f354a6084549b7b41 197 PANTHER PTHR11067:SF9 1 197 8.5E-91 T 22-04-2016 YE3437 f7645c7700b4c90f354a6084549b7b41 197 Pfam PF01725 Ham1 family 4 191 4.4E-56 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 YE3437 f7645c7700b4c90f354a6084549b7b41 197 PANTHER PTHR11067 1 197 8.5E-91 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 YE1473 b68fc70c50b76ebefc2bfb3ef8548e5e 431 PANTHER PTHR35334:SF2 1 430 2.8E-302 T 22-04-2016 YE1473 b68fc70c50b76ebefc2bfb3ef8548e5e 431 PANTHER PTHR35334 1 430 2.8E-302 T 22-04-2016 YE1473 b68fc70c50b76ebefc2bfb3ef8548e5e 431 Pfam PF03222 Tryptophan/tyrosine permease family 32 397 1.3E-10 T 22-04-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 YE1473 b68fc70c50b76ebefc2bfb3ef8548e5e 431 TIGRFAM TIGR00814 stp: serine transporter 20 419 8.9E-180 T 22-04-2016 IPR004694 Hydroxy amino acid transporter GO:0005215|GO:0006810|GO:0016021 YE2808 b679eefb6e2c66094ac8ca82acf435fb 157 PANTHER PTHR30302:SF4 4 157 8.0E-55 T 22-04-2016 YE2808 b679eefb6e2c66094ac8ca82acf435fb 157 PRINTS PR00446 Hydrogen uptake protein signature 62 72 2.1E-12 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 YE2808 b679eefb6e2c66094ac8ca82acf435fb 157 PRINTS PR00446 Hydrogen uptake protein signature 21 32 2.1E-12 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 YE2808 b679eefb6e2c66094ac8ca82acf435fb 157 PRINTS PR00446 Hydrogen uptake protein signature 9 21 2.1E-12 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 YE2808 b679eefb6e2c66094ac8ca82acf435fb 157 PRINTS PR00446 Hydrogen uptake protein signature 39 56 2.1E-12 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 YE2808 b679eefb6e2c66094ac8ca82acf435fb 157 PRINTS PR00446 Hydrogen uptake protein signature 73 89 2.1E-12 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 YE2808 b679eefb6e2c66094ac8ca82acf435fb 157 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 10 145 1.1E-37 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 YE2808 b679eefb6e2c66094ac8ca82acf435fb 157 Gene3D G3DSA:3.40.50.1450 10 155 2.8E-29 T 22-04-2016 IPR023430 Peptidase HybD-like domain YE2808 b679eefb6e2c66094ac8ca82acf435fb 157 SUPERFAMILY SSF53163 10 155 2.43E-36 T 22-04-2016 IPR023430 Peptidase HybD-like domain YE2808 b679eefb6e2c66094ac8ca82acf435fb 157 PANTHER PTHR30302 4 157 8.0E-55 T 22-04-2016 YE2808 b679eefb6e2c66094ac8ca82acf435fb 157 Pfam PF01750 Hydrogenase maturation protease 28 145 3.2E-27 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 YE2808 b679eefb6e2c66094ac8ca82acf435fb 157 TIGRFAM TIGR00142 hycI: hydrogenase maturation peptidase HycI 10 152 3.0E-55 T 22-04-2016 IPR004420 Peptidase A31, hydrogenase maturation protease HycI GO:0008233 YE2516 d1587c0734de60744adca5e830b93a4f 266 PANTHER PTHR18966 1 264 6.8E-177 T 22-04-2016 YE2516 d1587c0734de60744adca5e830b93a4f 266 SUPERFAMILY SSF53850 15 264 7.61E-79 T 22-04-2016 YE2516 d1587c0734de60744adca5e830b93a4f 266 SMART SM00079 42 262 8.7E-5 T 22-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 YE2516 d1587c0734de60744adca5e830b93a4f 266 Gene3D G3DSA:3.40.190.10 120 222 9.0E-31 T 22-04-2016 YE2516 d1587c0734de60744adca5e830b93a4f 266 PANTHER PTHR18966:SF189 1 264 6.8E-177 T 22-04-2016 YE2516 d1587c0734de60744adca5e830b93a4f 266 SMART SM00062 42 263 9.5E-86 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YE2516 d1587c0734de60744adca5e830b93a4f 266 Gene3D G3DSA:3.40.190.10 38 119 5.5E-49 T 22-04-2016 YE2516 d1587c0734de60744adca5e830b93a4f 266 Gene3D G3DSA:3.40.190.10 223 265 5.5E-49 T 22-04-2016 YE2516 d1587c0734de60744adca5e830b93a4f 266 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 65 78 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 YE2516 d1587c0734de60744adca5e830b93a4f 266 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 43 261 5.1E-73 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YE2798 365756f08a2ae265b6fae67790bad840 213 Gene3D G3DSA:3.30.70.20 65 87 1.3E-15 T 22-04-2016 YE2798 365756f08a2ae265b6fae67790bad840 213 PANTHER PTHR11938:SF111 1 101 3.9E-35 T 22-04-2016 YE2798 365756f08a2ae265b6fae67790bad840 213 PANTHER PTHR11938:SF111 140 169 3.9E-35 T 22-04-2016 YE2798 365756f08a2ae265b6fae67790bad840 213 Pfam PF00037 4Fe-4S binding domain 76 98 5.0E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YE2798 365756f08a2ae265b6fae67790bad840 213 SUPERFAMILY SSF54862 1 101 1.41E-38 T 22-04-2016 YE2798 365756f08a2ae265b6fae67790bad840 213 SUPERFAMILY SSF54862 140 180 1.41E-38 T 22-04-2016 YE2798 365756f08a2ae265b6fae67790bad840 213 Gene3D G3DSA:3.30.70.20 138 183 6.3E-16 T 22-04-2016 YE2798 365756f08a2ae265b6fae67790bad840 213 Gene3D G3DSA:3.30.70.20 8 64 4.3E-10 T 22-04-2016 YE2798 365756f08a2ae265b6fae67790bad840 213 Gene3D G3DSA:3.30.70.20 88 101 6.3E-16 T 22-04-2016 YE2798 365756f08a2ae265b6fae67790bad840 213 PANTHER PTHR11938 1 101 3.9E-35 T 22-04-2016 YE2798 365756f08a2ae265b6fae67790bad840 213 PANTHER PTHR11938 140 169 3.9E-35 T 22-04-2016 YE2798 365756f08a2ae265b6fae67790bad840 213 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 82 93 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YE2798 365756f08a2ae265b6fae67790bad840 213 Pfam PF12798 4Fe-4S binding domain 147 167 0.012 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YE1078 af946fac02c00abfaee98acc0ecbe200 318 PANTHER PTHR31752:SF13 86 314 1.5E-108 T 22-04-2016 YE1078 af946fac02c00abfaee98acc0ecbe200 318 Pfam PF03547 Membrane transport protein 168 307 2.1E-10 T 22-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 YE1078 af946fac02c00abfaee98acc0ecbe200 318 Pfam PF03547 Membrane transport protein 14 147 3.7E-9 T 22-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 YE1078 af946fac02c00abfaee98acc0ecbe200 318 PANTHER PTHR31752 86 314 1.5E-108 T 22-04-2016 YE3690 3b304a5cff7acf59de449a890a712f99 483 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 YE3690 3b304a5cff7acf59de449a890a712f99 483 Pfam PF02378 Phosphotransferase system, EIIC 128 410 3.2E-33 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 YE3690 3b304a5cff7acf59de449a890a712f99 483 Pfam PF00367 phosphotransferase system, EIIB 11 42 3.5E-11 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 YE3690 3b304a5cff7acf59de449a890a712f99 483 Gene3D G3DSA:3.30.1360.60 7 80 2.5E-21 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YE3690 3b304a5cff7acf59de449a890a712f99 483 PANTHER PTHR30175 1 483 5.1E-199 T 22-04-2016 YE3690 3b304a5cff7acf59de449a890a712f99 483 SUPERFAMILY SSF55604 9 80 4.71E-18 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YE3690 3b304a5cff7acf59de449a890a712f99 483 PANTHER PTHR30175:SF3 1 483 5.1E-199 T 22-04-2016 YE2157 1c5a3af6bc69743cd825e4a7fa618301 192 Gene3D G3DSA:1.10.287.990 20 82 1.0E-24 T 22-04-2016 YE2157 1c5a3af6bc69743cd825e4a7fa618301 192 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 82 9.8E-35 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YE2157 1c5a3af6bc69743cd825e4a7fa618301 192 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 190 4.6E-41 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YE2157 1c5a3af6bc69743cd825e4a7fa618301 192 PIRSF PIRSF000349 1 192 1.7E-86 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YE2157 1c5a3af6bc69743cd825e4a7fa618301 192 PANTHER PTHR11404 1 192 1.3E-111 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YE2157 1c5a3af6bc69743cd825e4a7fa618301 192 SUPERFAMILY SSF46609 1 84 1.2E-35 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YE2157 1c5a3af6bc69743cd825e4a7fa618301 192 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 3.9E-22 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YE2157 1c5a3af6bc69743cd825e4a7fa618301 192 PRINTS PR01703 Manganese superoxide dismutase signature 155 167 3.9E-22 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YE2157 1c5a3af6bc69743cd825e4a7fa618301 192 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 3.9E-22 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YE2157 1c5a3af6bc69743cd825e4a7fa618301 192 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 3.9E-22 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YE2157 1c5a3af6bc69743cd825e4a7fa618301 192 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 3.9E-22 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YE2157 1c5a3af6bc69743cd825e4a7fa618301 192 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 157 164 - T 22-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YE2157 1c5a3af6bc69743cd825e4a7fa618301 192 SUPERFAMILY SSF54719 82 191 1.83E-44 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YE2157 1c5a3af6bc69743cd825e4a7fa618301 192 PANTHER PTHR11404:SF8 1 192 1.3E-111 T 22-04-2016 YE1878 a8304b9dcd634b1336b86aa18b34622e 283 SMART SM00644 36 182 2.0E-27 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 YE1878 a8304b9dcd634b1336b86aa18b34622e 283 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 45 183 4.6E-21 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 YE1878 a8304b9dcd634b1336b86aa18b34622e 283 PANTHER PTHR30417 45 279 1.9E-87 T 22-04-2016 YE1878 a8304b9dcd634b1336b86aa18b34622e 283 Pfam PF01471 Putative peptidoglycan binding domain 216 269 3.9E-9 T 22-04-2016 IPR002477 Peptidoglycan binding-like YE1878 a8304b9dcd634b1336b86aa18b34622e 283 Gene3D G3DSA:1.10.101.10 217 255 7.6E-5 T 22-04-2016 IPR002477 Peptidoglycan binding-like YE1878 a8304b9dcd634b1336b86aa18b34622e 283 SUPERFAMILY SSF47090 201 280 1.16E-22 T 22-04-2016 IPR002477 Peptidoglycan binding-like YE1878 a8304b9dcd634b1336b86aa18b34622e 283 SUPERFAMILY SSF55846 29 198 2.22E-53 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 YE1878 a8304b9dcd634b1336b86aa18b34622e 283 Gene3D G3DSA:3.40.80.10 36 201 5.3E-57 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 YE3008 a27ec76264a9462ab63d84cfe3c3993d 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 156.322 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 YE3008 a27ec76264a9462ab63d84cfe3c3993d 321 SUPERFAMILY SSF102114 53 316 4.71E-68 T 22-04-2016 YE3008 a27ec76264a9462ab63d84cfe3c3993d 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 321 1.2E-159 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 YE3008 a27ec76264a9462ab63d84cfe3c3993d 321 PANTHER PTHR10949 4 321 1.8E-185 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 YE3008 a27ec76264a9462ab63d84cfe3c3993d 321 PIRSF PIRSF005963 2 320 8.0E-131 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 YE3008 a27ec76264a9462ab63d84cfe3c3993d 321 Gene3D G3DSA:3.20.20.70 55 312 7.1E-72 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YE3008 a27ec76264a9462ab63d84cfe3c3993d 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 27 73 6.8E-7 T 22-04-2016 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 YE3008 a27ec76264a9462ab63d84cfe3c3993d 321 SMART SM00729 84 293 1.3E-16 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 YE3008 a27ec76264a9462ab63d84cfe3c3993d 321 Pfam PF04055 Radical SAM superfamily 91 251 5.3E-16 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 YE0850 fd09e396f3ab0f03aa3e33326721ffa2 359 PANTHER PTHR21225:SF0 1 359 8.4E-225 T 22-04-2016 YE0850 fd09e396f3ab0f03aa3e33326721ffa2 359 PIRSF PIRSF001361 1 354 1.5E-163 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 YE0850 fd09e396f3ab0f03aa3e33326721ffa2 359 Pfam PF00793 DAHP synthetase I family 41 340 9.0E-106 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 YE0850 fd09e396f3ab0f03aa3e33326721ffa2 359 PANTHER PTHR21225 1 359 8.4E-225 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 YE0850 fd09e396f3ab0f03aa3e33326721ffa2 359 SUPERFAMILY SSF51569 8 347 1.01E-135 T 22-04-2016 YE0850 fd09e396f3ab0f03aa3e33326721ffa2 359 Gene3D G3DSA:3.20.20.70 10 350 3.9E-154 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YE0850 fd09e396f3ab0f03aa3e33326721ffa2 359 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 8 349 1.1E-167 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 YE3306 9ccb27b4e98d35967940bb3d602860e7 390 Pfam PF06725 3D domain 279 356 2.3E-25 T 22-04-2016 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 YE3306 9ccb27b4e98d35967940bb3d602860e7 390 Pfam PF03562 MltA specific insert domain 103 259 8.9E-42 T 22-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 YE3306 9ccb27b4e98d35967940bb3d602860e7 390 Gene3D G3DSA:2.40.40.10 168 356 2.3E-47 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain YE3306 9ccb27b4e98d35967940bb3d602860e7 390 Gene3D G3DSA:2.40.40.10 95 163 3.8E-10 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain YE3306 9ccb27b4e98d35967940bb3d602860e7 390 SMART SM00925 125 259 6.3E-73 T 22-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 YE3306 9ccb27b4e98d35967940bb3d602860e7 390 PANTHER PTHR30124:SF0 1 388 3.8E-158 T 22-04-2016 YE3306 9ccb27b4e98d35967940bb3d602860e7 390 PIRSF PIRSF019422 1 367 2.1E-87 T 22-04-2016 IPR026044 Membrane-bound lytic murein transglycosylase A YE3306 9ccb27b4e98d35967940bb3d602860e7 390 SUPERFAMILY SSF50685 25 355 9.42E-110 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain YE3306 9ccb27b4e98d35967940bb3d602860e7 390 PANTHER PTHR30124 1 388 3.8E-158 T 22-04-2016 YE3754 7dc46d260d9f881e63b7b9d2590d4664 325 PANTHER PTHR11911:SF90 177 322 1.2E-42 T 22-04-2016 YE3754 7dc46d260d9f881e63b7b9d2590d4664 325 SUPERFAMILY SSF53697 11 322 1.71E-66 T 22-04-2016 YE3754 7dc46d260d9f881e63b7b9d2590d4664 325 Pfam PF01380 SIS domain 44 174 4.7E-31 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 YE3754 7dc46d260d9f881e63b7b9d2590d4664 325 PIRSF PIRSF004692 2 325 1.8E-134 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 YE3754 7dc46d260d9f881e63b7b9d2590d4664 325 Gene3D G3DSA:3.40.50.10490 14 193 2.1E-52 T 22-04-2016 YE3754 7dc46d260d9f881e63b7b9d2590d4664 325 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 47 315 2.1E-124 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 YE3754 7dc46d260d9f881e63b7b9d2590d4664 325 PANTHER PTHR11911 177 322 1.2E-42 T 22-04-2016 YE3754 7dc46d260d9f881e63b7b9d2590d4664 325 Pfam PF00571 CBS domain 203 258 1.3E-5 T 22-04-2016 IPR000644 CBS domain YE3754 7dc46d260d9f881e63b7b9d2590d4664 325 Pfam PF00571 CBS domain 271 322 3.4E-6 T 22-04-2016 IPR000644 CBS domain YE3754 7dc46d260d9f881e63b7b9d2590d4664 325 Gene3D G3DSA:3.10.580.10 194 322 5.4E-39 T 22-04-2016 YE0157 da5ccd04bc895e2edda981e4a0e44efd 225 Gene3D G3DSA:2.60.40.360 10 134 1.6E-38 T 22-04-2016 IPR008962 PapD-like YE0157 da5ccd04bc895e2edda981e4a0e44efd 225 PANTHER PTHR30251:SF7 1 225 3.4E-109 T 22-04-2016 YE0157 da5ccd04bc895e2edda981e4a0e44efd 225 PANTHER PTHR30251 1 225 3.4E-109 T 22-04-2016 YE0157 da5ccd04bc895e2edda981e4a0e44efd 225 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 88 105 - T 22-04-2016 IPR018046 Pili assembly chaperone, conserved site YE0157 da5ccd04bc895e2edda981e4a0e44efd 225 SUPERFAMILY SSF49354 5 134 7.59E-38 T 22-04-2016 IPR008962 PapD-like YE0157 da5ccd04bc895e2edda981e4a0e44efd 225 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 160 218 3.8E-13 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YE0157 da5ccd04bc895e2edda981e4a0e44efd 225 Gene3D G3DSA:2.60.40.1070 139 220 5.1E-17 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YE0157 da5ccd04bc895e2edda981e4a0e44efd 225 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 11 134 8.2E-40 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 YE0157 da5ccd04bc895e2edda981e4a0e44efd 225 PRINTS PR00969 Pili chaperone signature 11 20 6.0E-29 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YE0157 da5ccd04bc895e2edda981e4a0e44efd 225 PRINTS PR00969 Pili chaperone signature 89 106 6.0E-29 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YE0157 da5ccd04bc895e2edda981e4a0e44efd 225 PRINTS PR00969 Pili chaperone signature 60 81 6.0E-29 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YE0157 da5ccd04bc895e2edda981e4a0e44efd 225 PRINTS PR00969 Pili chaperone signature 155 170 6.0E-29 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YE0157 da5ccd04bc895e2edda981e4a0e44efd 225 PRINTS PR00969 Pili chaperone signature 116 131 6.0E-29 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YE0157 da5ccd04bc895e2edda981e4a0e44efd 225 SUPERFAMILY SSF49584 128 220 2.49E-16 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YE2467 1f3e8bf793603952be029b6d02e5bab8 488 Gene3D G3DSA:3.40.605.10 1 254 3.9E-74 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 YE2467 1f3e8bf793603952be029b6d02e5bab8 488 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 1 484 57.393 T 22-04-2016 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71|UniPathway: UPA00185 YE2467 1f3e8bf793603952be029b6d02e5bab8 488 PANTHER PTHR11699:SF197 1 459 0.0 T 22-04-2016 YE2467 1f3e8bf793603952be029b6d02e5bab8 488 Gene3D G3DSA:3.40.309.10 255 441 1.3E-42 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 YE2467 1f3e8bf793603952be029b6d02e5bab8 488 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 1 484 5.3E-260 T 22-04-2016 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71|UniPathway: UPA00185 YE2467 1f3e8bf793603952be029b6d02e5bab8 488 SUPERFAMILY SSF53720 1 453 5.24E-123 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 YE2467 1f3e8bf793603952be029b6d02e5bab8 488 PANTHER PTHR11699 1 459 0.0 T 22-04-2016 YE2467 1f3e8bf793603952be029b6d02e5bab8 488 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 268 279 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 YE2467 1f3e8bf793603952be029b6d02e5bab8 488 Pfam PF00171 Aldehyde dehydrogenase family 7 456 1.8E-121 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 YE2467 1f3e8bf793603952be029b6d02e5bab8 488 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 240 247 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 YE3311 2259393af151b2a4a5a9dc13f60f761c 963 Gene3D G3DSA:3.30.830.10 275 508 1.4E-67 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 YE3311 2259393af151b2a4a5a9dc13f60f761c 963 PANTHER PTHR11851 6 396 0.0 T 22-04-2016 YE3311 2259393af151b2a4a5a9dc13f60f761c 963 PANTHER PTHR11851 413 931 0.0 T 22-04-2016 YE3311 2259393af151b2a4a5a9dc13f60f761c 963 Pfam PF16187 Middle or third domain of peptidase_M16 402 676 7.4E-60 T 22-04-2016 IPR032632 Peptidase M16, middle/third domain YE3311 2259393af151b2a4a5a9dc13f60f761c 963 PANTHER PTHR11851:SF135 6 396 0.0 T 22-04-2016 YE3311 2259393af151b2a4a5a9dc13f60f761c 963 PANTHER PTHR11851:SF135 413 931 0.0 T 22-04-2016 YE3311 2259393af151b2a4a5a9dc13f60f761c 963 Pfam PF05193 Peptidase M16 inactive domain 218 394 3.7E-20 T 22-04-2016 IPR007863 Peptidase M16, C-terminal YE3311 2259393af151b2a4a5a9dc13f60f761c 963 Pfam PF05193 Peptidase M16 inactive domain 683 860 1.1E-9 T 22-04-2016 IPR007863 Peptidase M16, C-terminal YE3311 2259393af151b2a4a5a9dc13f60f761c 963 Gene3D G3DSA:3.30.830.10 509 730 2.8E-62 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 YE3311 2259393af151b2a4a5a9dc13f60f761c 963 Gene3D G3DSA:3.30.830.10 731 957 2.6E-54 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 YE3311 2259393af151b2a4a5a9dc13f60f761c 963 SUPERFAMILY SSF63411 36 263 3.85E-52 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 YE3311 2259393af151b2a4a5a9dc13f60f761c 963 Gene3D G3DSA:3.30.830.10 32 267 2.8E-64 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 YE3311 2259393af151b2a4a5a9dc13f60f761c 963 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 77 100 - T 22-04-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 YE3311 2259393af151b2a4a5a9dc13f60f761c 963 SUPERFAMILY SSF63411 267 503 8.8E-69 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 YE3311 2259393af151b2a4a5a9dc13f60f761c 963 Pfam PF00675 Insulinase (Peptidase family M16) 57 193 2.5E-34 T 22-04-2016 IPR011765 Peptidase M16, N-terminal YE3311 2259393af151b2a4a5a9dc13f60f761c 963 SUPERFAMILY SSF63411 747 956 1.67E-43 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 YE3311 2259393af151b2a4a5a9dc13f60f761c 963 SUPERFAMILY SSF63411 506 731 3.67E-48 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 YE3208 8cfe663ad7fe4bd792c3b6552d79bd2e 130 SUPERFAMILY SSF55298 6 129 9.27E-36 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like YE3208 8cfe663ad7fe4bd792c3b6552d79bd2e 130 Gene3D G3DSA:3.30.1330.40 2 129 7.2E-34 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like YE3208 8cfe663ad7fe4bd792c3b6552d79bd2e 130 Pfam PF01042 Endoribonuclease L-PSP 15 127 6.8E-29 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family YE3208 8cfe663ad7fe4bd792c3b6552d79bd2e 130 PANTHER PTHR11803 6 129 1.8E-27 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family YE2160 d2c10ffb182a6cf79af513bf462239ca 405 PANTHER PTHR23502:SF28 1 388 1.9E-206 T 22-04-2016 YE2160 d2c10ffb182a6cf79af513bf462239ca 405 Gene3D G3DSA:1.20.1250.20 203 392 6.1E-9 T 22-04-2016 YE2160 d2c10ffb182a6cf79af513bf462239ca 405 PANTHER PTHR23502 1 388 1.9E-206 T 22-04-2016 YE2160 d2c10ffb182a6cf79af513bf462239ca 405 Gene3D G3DSA:1.20.1250.20 10 186 1.4E-28 T 22-04-2016 YE2160 d2c10ffb182a6cf79af513bf462239ca 405 Pfam PF07690 Major Facilitator Superfamily 14 345 9.1E-41 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YE2160 d2c10ffb182a6cf79af513bf462239ca 405 SUPERFAMILY SSF103473 7 390 3.01E-60 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE2160 d2c10ffb182a6cf79af513bf462239ca 405 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 4 383 2.5E-108 T 22-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 YE3120 70eb157966fa0ccc6e1de75f03e8f716 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.7E-41 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YE3120 70eb157966fa0ccc6e1de75f03e8f716 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 22-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 YE3120 70eb157966fa0ccc6e1de75f03e8f716 112 SUPERFAMILY SSF54913 1 112 2.13E-42 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta YE3120 70eb157966fa0ccc6e1de75f03e8f716 112 Gene3D G3DSA:3.30.70.120 1 112 4.3E-48 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal YE3120 70eb157966fa0ccc6e1de75f03e8f716 112 PANTHER PTHR30115 1 112 2.0E-83 T 22-04-2016 YE3120 70eb157966fa0ccc6e1de75f03e8f716 112 PRINTS PR00340 P-II protein signature 83 103 3.1E-41 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YE3120 70eb157966fa0ccc6e1de75f03e8f716 112 PRINTS PR00340 P-II protein signature 52 75 3.1E-41 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YE3120 70eb157966fa0ccc6e1de75f03e8f716 112 PRINTS PR00340 P-II protein signature 2 17 3.1E-41 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YE3120 70eb157966fa0ccc6e1de75f03e8f716 112 PRINTS PR00340 P-II protein signature 23 41 3.1E-41 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YE3120 70eb157966fa0ccc6e1de75f03e8f716 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 22-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 YE3120 70eb157966fa0ccc6e1de75f03e8f716 112 PANTHER PTHR30115:SF12 1 112 2.0E-83 T 22-04-2016 YE3120 70eb157966fa0ccc6e1de75f03e8f716 112 SMART SM00938 4 105 5.9E-61 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YE3120 70eb157966fa0ccc6e1de75f03e8f716 112 PIRSF PIRSF039144 1 112 3.9E-53 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YE2229 170c58e1c38afe5dac64c82a7d57121c 333 Gene3D G3DSA:3.40.50.300 7 267 7.0E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2229 170c58e1c38afe5dac64c82a7d57121c 333 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 310 1.0E-18 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 YE2229 170c58e1c38afe5dac64c82a7d57121c 333 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 241 328 2.5E-29 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 YE2229 170c58e1c38afe5dac64c82a7d57121c 333 PANTHER PTHR24220 12 328 3.5E-200 T 22-04-2016 YE2229 170c58e1c38afe5dac64c82a7d57121c 333 PANTHER PTHR24220:SF544 12 328 3.5E-200 T 22-04-2016 YE2229 170c58e1c38afe5dac64c82a7d57121c 333 SMART SM00382 48 241 4.0E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain YE2229 170c58e1c38afe5dac64c82a7d57121c 333 SUPERFAMILY SSF52540 22 263 2.06E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2229 170c58e1c38afe5dac64c82a7d57121c 333 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE2229 170c58e1c38afe5dac64c82a7d57121c 333 Pfam PF00005 ABC transporter 40 191 2.6E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE2556 9f06ef1c877af85da8e16ef1a95db62b 251 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 172 247 1.9E-20 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YE2556 9f06ef1c877af85da8e16ef1a95db62b 251 SUPERFAMILY SSF117143 77 209 8.89E-18 T 22-04-2016 YE2556 9f06ef1c877af85da8e16ef1a95db62b 251 PANTHER PTHR30435:SF18 1 251 3.0E-114 T 22-04-2016 YE2556 9f06ef1c877af85da8e16ef1a95db62b 251 PANTHER PTHR30435 1 251 3.0E-114 T 22-04-2016 YE2556 9f06ef1c877af85da8e16ef1a95db62b 251 Pfam PF00460 Flagella basal body rod protein 5 35 4.9E-8 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 YE2556 9f06ef1c877af85da8e16ef1a95db62b 251 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 120 4.4E-34 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G YE3913 13b85a28b0b4b309ba6e7945e5bc55a1 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 22-04-2016 IPR019972 Ribosomal protein L14P, conserved site YE3913 13b85a28b0b4b309ba6e7945e5bc55a1 123 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 123 5.0E-60 T 22-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 YE3913 13b85a28b0b4b309ba6e7945e5bc55a1 123 Gene3D G3DSA:2.40.150.20 1 123 6.1E-56 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 YE3913 13b85a28b0b4b309ba6e7945e5bc55a1 123 PANTHER PTHR11761 1 123 3.9E-78 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 YE3913 13b85a28b0b4b309ba6e7945e5bc55a1 123 SMART SM01374 1 123 2.8E-86 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 YE3913 13b85a28b0b4b309ba6e7945e5bc55a1 123 SUPERFAMILY SSF50193 2 122 1.57E-51 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 YE3913 13b85a28b0b4b309ba6e7945e5bc55a1 123 Pfam PF00238 Ribosomal protein L14p/L23e 1 123 7.8E-55 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 YE3913 13b85a28b0b4b309ba6e7945e5bc55a1 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 28.101 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 YE2618 b3aadde0cfad52935c7df4877b26443f 3161 Pfam PF00975 Thioesterase domain 2913 2999 1.1E-19 T 22-04-2016 IPR001031 Thioesterase GO:0009058|GO:0016788 YE2618 b3aadde0cfad52935c7df4877b26443f 3161 Pfam PF00550 Phosphopantetheine attachment site 1821 1887 9.6E-8 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YE2618 b3aadde0cfad52935c7df4877b26443f 3161 Pfam PF00550 Phosphopantetheine attachment site 2830 2892 3.8E-13 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YE2618 b3aadde0cfad52935c7df4877b26443f 3161 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 404 515 2.9E-13 T 22-04-2016 IPR032821 Ketoacyl-synthetase, C-terminal extension YE2618 b3aadde0cfad52935c7df4877b26443f 3161 SUPERFAMILY SSF53335 2573 2748 2.97E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE2618 b3aadde0cfad52935c7df4877b26443f 3161 Pfam PF08242 Methyltransferase domain 2591 2691 1.1E-16 T 22-04-2016 IPR013217 Methyltransferase type 12 YE2618 b3aadde0cfad52935c7df4877b26443f 3161 Pfam PF08242 Methyltransferase domain 1093 1194 1.1E-20 T 22-04-2016 IPR013217 Methyltransferase type 12 YE2618 b3aadde0cfad52935c7df4877b26443f 3161 SUPERFAMILY SSF55048 675 736 2.09E-6 T 22-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 YE2618 b3aadde0cfad52935c7df4877b26443f 3161 Gene3D G3DSA:3.40.47.10 29 288 1.6E-71 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YE2618 b3aadde0cfad52935c7df4877b26443f 3161 SMART SM00825 Beta-ketoacyl synthase 29 452 4.4E-182 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YE2618 b3aadde0cfad52935c7df4877b26443f 3161 Pfam PF00668 Condensation domain 1914 2205 7.3E-41 T 22-04-2016 IPR001242 Condensation domain YE2618 b3aadde0cfad52935c7df4877b26443f 3161 PANTHER PTHR11712 14 1887 0.0 T 22-04-2016 YE2618 b3aadde0cfad52935c7df4877b26443f 3161 PANTHER PTHR11712 2927 3019 0.0 T 22-04-2016 YE2618 b3aadde0cfad52935c7df4877b26443f 3161 Pfam PF08659 KR domain 1558 1727 3.4E-37 T 22-04-2016 IPR013968 Polyketide synthase, ketoreductase domain YE2618 b3aadde0cfad52935c7df4877b26443f 3161 SUPERFAMILY SSF53474 2896 3150 3.45E-44 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE2618 b3aadde0cfad52935c7df4877b26443f 3161 SUPERFAMILY SSF52777 2096 2341 5.67E-42 T 22-04-2016 YE2618 b3aadde0cfad52935c7df4877b26443f 3161 Gene3D G3DSA:3.40.50.1820 3083 3150 3.7E-34 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE2618 b3aadde0cfad52935c7df4877b26443f 3161 Gene3D G3DSA:3.40.50.1820 2898 3009 3.7E-34 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE2618 b3aadde0cfad52935c7df4877b26443f 3161 SUPERFAMILY SSF52151 550 677 5.75E-60 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 YE2618 b3aadde0cfad52935c7df4877b26443f 3161 SUPERFAMILY SSF52151 738 835 5.75E-60 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 YE2618 b3aadde0cfad52935c7df4877b26443f 3161 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 27 276 3.0E-74 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal YE2618 b3aadde0cfad52935c7df4877b26443f 3161 SUPERFAMILY SSF51735 1384 1537 1.57E-9 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2618 b3aadde0cfad52935c7df4877b26443f 3161 SUPERFAMILY SSF52777 1910 2106 2.67E-23 T 22-04-2016 YE2618 b3aadde0cfad52935c7df4877b26443f 3161 Gene3D G3DSA:3.40.47.10 290 453 1.3E-58 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YE2618 b3aadde0cfad52935c7df4877b26443f 3161 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 553 844 1.9E-76 T 22-04-2016 IPR020801 Polyketide synthase, acyl transferase domain YE2618 b3aadde0cfad52935c7df4877b26443f 3161 Gene3D G3DSA:1.10.1200.10 1817 1890 2.7E-8 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YE2618 b3aadde0cfad52935c7df4877b26443f 3161 SUPERFAMILY SSF53901 427 447 1.17E-78 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YE2618 b3aadde0cfad52935c7df4877b26443f 3161 SUPERFAMILY SSF53901 172 397 1.17E-78 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YE2618 b3aadde0cfad52935c7df4877b26443f 3161 SUPERFAMILY SSF53901 23 143 1.17E-78 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YE2618 b3aadde0cfad52935c7df4877b26443f 3161 SMART SM00824 Thioesterase 2916 3150 7.5E-4 T 22-04-2016 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 YE2618 b3aadde0cfad52935c7df4877b26443f 3161 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1846 1861 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site YE2618 b3aadde0cfad52935c7df4877b26443f 3161 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2851 2866 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site YE2618 b3aadde0cfad52935c7df4877b26443f 3161 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 285 401 1.2E-39 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal YE2618 b3aadde0cfad52935c7df4877b26443f 3161 Pfam PF08415 Nonribosomal peptide synthase 2230 2291 1.4E-16 T 22-04-2016 IPR013624 Non-ribosomal peptide synthetase YE2618 b3aadde0cfad52935c7df4877b26443f 3161 Gene3D G3DSA:3.40.366.10 546 671 2.8E-63 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 YE2618 b3aadde0cfad52935c7df4877b26443f 3161 Gene3D G3DSA:3.40.366.10 736 846 2.8E-63 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 YE2618 b3aadde0cfad52935c7df4877b26443f 3161 SUPERFAMILY SSF53335 1060 1250 2.66E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE2618 b3aadde0cfad52935c7df4877b26443f 3161 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 189 205 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site YE2618 b3aadde0cfad52935c7df4877b26443f 3161 PANTHER PTHR11712:SF288 14 1887 0.0 T 22-04-2016 YE2618 b3aadde0cfad52935c7df4877b26443f 3161 PANTHER PTHR11712:SF288 2927 3019 0.0 T 22-04-2016 YE2618 b3aadde0cfad52935c7df4877b26443f 3161 SUPERFAMILY SSF51735 1554 1784 9.61E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2618 b3aadde0cfad52935c7df4877b26443f 3161 Pfam PF00698 Acyl transferase domain 551 846 5.5E-52 T 22-04-2016 IPR014043 Acyl transferase YE2618 b3aadde0cfad52935c7df4877b26443f 3161 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1556 1729 7.0E-25 T 22-04-2016 YE2618 b3aadde0cfad52935c7df4877b26443f 3161 Gene3D G3DSA:3.40.50.150 1049 1246 9.0E-36 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE2618 b3aadde0cfad52935c7df4877b26443f 3161 Gene3D G3DSA:1.10.1200.10 2826 2897 5.7E-19 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YE2618 b3aadde0cfad52935c7df4877b26443f 3161 Gene3D G3DSA:3.40.50.720 1554 1743 3.9E-26 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2618 b3aadde0cfad52935c7df4877b26443f 3161 SUPERFAMILY SSF47336 2826 2892 1.31E-12 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YE2618 b3aadde0cfad52935c7df4877b26443f 3161 Gene3D G3DSA:3.40.50.150 1905 1938 5.1E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE2618 b3aadde0cfad52935c7df4877b26443f 3161 Gene3D G3DSA:3.40.50.150 2582 2744 5.1E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE2618 b3aadde0cfad52935c7df4877b26443f 3161 SMART SM00823 Phosphopantetheine attachment site 1819 1891 7.8E-4 T 22-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 YE2618 b3aadde0cfad52935c7df4877b26443f 3161 SMART SM00823 Phosphopantetheine attachment site 2828 2896 0.0025 T 22-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 YE2618 b3aadde0cfad52935c7df4877b26443f 3161 SUPERFAMILY SSF47336 1815 1926 1.44E-12 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YE2349 202def3819a4a97794ca1eb65c4a078d 90 Gene3D G3DSA:1.10.8.320 1 79 6.6E-31 T 22-04-2016 YE2349 202def3819a4a97794ca1eb65c4a078d 90 SUPERFAMILY SSF47413 6 80 3.26E-25 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE2349 202def3819a4a97794ca1eb65c4a078d 90 Pfam PF05269 Bacteriophage CII protein 1 86 7.9E-30 T 22-04-2016 IPR007933 Transcription activator CII GO:0003677|GO:0006355 YE0552 a0f65f377d6990ef186a8cd86f2b47cc 456 Pfam PF02378 Phosphotransferase system, EIIC 110 395 9.4E-48 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 YE0552 a0f65f377d6990ef186a8cd86f2b47cc 456 TIGRFAM TIGR01996 PTS-II-BC-sucr: PTS system, sucrose-specific IIBC component 3 448 1.6E-192 T 22-04-2016 IPR010973 Phosphotransferase system, sucrose-specific IIBC component GO:0008982|GO:0009401|GO:0016021 YE0552 a0f65f377d6990ef186a8cd86f2b47cc 456 Gene3D G3DSA:3.30.1360.60 1 82 6.0E-26 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YE0552 a0f65f377d6990ef186a8cd86f2b47cc 456 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 153 437 2.4E-89 T 22-04-2016 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 YE0552 a0f65f377d6990ef186a8cd86f2b47cc 456 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 28 111 1.4E-21 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YE0552 a0f65f377d6990ef186a8cd86f2b47cc 456 PANTHER PTHR30175:SF7 1 456 9.9E-193 T 22-04-2016 YE0552 a0f65f377d6990ef186a8cd86f2b47cc 456 Pfam PF00367 phosphotransferase system, EIIB 9 40 4.4E-14 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 YE0552 a0f65f377d6990ef186a8cd86f2b47cc 456 SUPERFAMILY SSF55604 6 82 2.48E-20 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YE0552 a0f65f377d6990ef186a8cd86f2b47cc 456 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 YE0552 a0f65f377d6990ef186a8cd86f2b47cc 456 PANTHER PTHR30175 1 456 9.9E-193 T 22-04-2016 YE3017 dd024e0c3967d5d36f034ed766a6a285 64 Gene3D G3DSA:1.20.58.250 11 63 4.6E-17 T 22-04-2016 IPR011326 Homologue of theta DNA polymerase III YE3017 dd024e0c3967d5d36f034ed766a6a285 64 Pfam PF08971 Glycogen synthesis protein 11 58 2.4E-8 T 22-04-2016 IPR015065 Surface composition regulator YE3017 dd024e0c3967d5d36f034ed766a6a285 64 SUPERFAMILY SSF46575 15 60 1.57E-7 T 22-04-2016 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 YE1999 a7bd967ff9fd08a0f048ed59c810b6c0 464 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 50 464 5.5E-116 T 22-04-2016 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 YE1999 a7bd967ff9fd08a0f048ed59c810b6c0 464 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 59 82 7.9E-57 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YE1999 a7bd967ff9fd08a0f048ed59c810b6c0 464 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 428 443 7.9E-57 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YE1999 a7bd967ff9fd08a0f048ed59c810b6c0 464 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 385 408 7.9E-57 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YE1999 a7bd967ff9fd08a0f048ed59c810b6c0 464 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 101 121 7.9E-57 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YE1999 a7bd967ff9fd08a0f048ed59c810b6c0 464 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 443 463 7.9E-57 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YE1999 a7bd967ff9fd08a0f048ed59c810b6c0 464 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 328 349 7.9E-57 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YE1999 a7bd967ff9fd08a0f048ed59c810b6c0 464 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 361 385 7.9E-57 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YE1999 a7bd967ff9fd08a0f048ed59c810b6c0 464 Pfam PF13533 Biotin-lipoyl like 93 137 5.7E-8 T 22-04-2016 YE1999 a7bd967ff9fd08a0f048ed59c810b6c0 464 PANTHER PTHR30386:SF8 175 464 2.1E-83 T 22-04-2016 YE1999 a7bd967ff9fd08a0f048ed59c810b6c0 464 PANTHER PTHR30386:SF8 21 144 2.1E-83 T 22-04-2016 YE1999 a7bd967ff9fd08a0f048ed59c810b6c0 464 PANTHER PTHR30386 175 464 2.1E-83 T 22-04-2016 YE1999 a7bd967ff9fd08a0f048ed59c810b6c0 464 PANTHER PTHR30386 21 144 2.1E-83 T 22-04-2016 YE1999 a7bd967ff9fd08a0f048ed59c810b6c0 464 Pfam PF13437 HlyD family secretion protein 315 423 9.6E-18 T 22-04-2016 YE1999 a7bd967ff9fd08a0f048ed59c810b6c0 464 ProSitePatterns PS00543 HlyD family secretion proteins signature. 428 450 - T 22-04-2016 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 YE1999 a7bd967ff9fd08a0f048ed59c810b6c0 464 Gene3D G3DSA:2.40.50.100 93 123 7.0E-17 T 22-04-2016 YE1999 a7bd967ff9fd08a0f048ed59c810b6c0 464 Gene3D G3DSA:2.40.50.100 313 348 7.0E-17 T 22-04-2016 YE0045 5396b87ac1194042235fac5ce7f639fd 700 SUPERFAMILY SSF81301 180 392 4.41E-62 T 22-04-2016 YE0045 5396b87ac1194042235fac5ce7f639fd 700 PANTHER PTHR21262 3 700 0.0 T 22-04-2016 YE0045 5396b87ac1194042235fac5ce7f639fd 700 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 1.0E-35 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 YE0045 5396b87ac1194042235fac5ce7f639fd 700 SMART SM00471 41 153 1.3E-11 T 22-04-2016 IPR003607 HD/PDEase domain YE0045 5396b87ac1194042235fac5ce7f639fd 700 PANTHER PTHR21262:SF0 3 700 0.0 T 22-04-2016 YE0045 5396b87ac1194042235fac5ce7f639fd 700 Pfam PF02824 TGS domain 388 447 1.6E-21 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 YE0045 5396b87ac1194042235fac5ce7f639fd 700 SUPERFAMILY SSF55021 627 697 3.41E-5 T 22-04-2016 YE0045 5396b87ac1194042235fac5ce7f639fd 700 Gene3D G3DSA:3.30.460.10 178 324 3.7E-47 T 22-04-2016 YE0045 5396b87ac1194042235fac5ce7f639fd 700 SUPERFAMILY SSF81271 375 447 2.83E-21 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 YE0045 5396b87ac1194042235fac5ce7f639fd 700 Pfam PF13291 ACT domain 620 697 1.5E-17 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 YE0045 5396b87ac1194042235fac5ce7f639fd 700 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 696 2.2E-286 T 22-04-2016 IPR004811 RelA/SpoT family GO:0015969 YE0045 5396b87ac1194042235fac5ce7f639fd 700 SUPERFAMILY SSF109604 3 190 2.39E-75 T 22-04-2016 YE0045 5396b87ac1194042235fac5ce7f639fd 700 SMART SM00954 235 345 3.0E-62 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 YE0045 5396b87ac1194042235fac5ce7f639fd 700 Pfam PF13328 HD domain 26 175 3.9E-53 T 22-04-2016 IPR003607 HD/PDEase domain YE0045 5396b87ac1194042235fac5ce7f639fd 700 Gene3D G3DSA:3.10.20.30 387 448 9.3E-23 T 22-04-2016 IPR012675 Beta-grasp domain YE0045 5396b87ac1194042235fac5ce7f639fd 700 Gene3D G3DSA:3.30.70.260 625 695 7.1E-7 T 22-04-2016 YE2585 2e18a4dbe1feccb26d0d9129477b6452 872 Pfam PF00689 Cation transporting ATPase, C-terminus 695 863 1.3E-16 T 22-04-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal YE2585 2e18a4dbe1feccb26d0d9129477b6452 872 Gene3D G3DSA:1.20.1110.10 48 111 3.2E-68 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain YE2585 2e18a4dbe1feccb26d0d9129477b6452 872 Gene3D G3DSA:1.20.1110.10 581 863 3.2E-68 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain YE2585 2e18a4dbe1feccb26d0d9129477b6452 872 Gene3D G3DSA:2.70.150.10 112 243 2.1E-37 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 YE2585 2e18a4dbe1feccb26d0d9129477b6452 872 Gene3D G3DSA:2.70.150.10 13 47 2.1E-37 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 YE2585 2e18a4dbe1feccb26d0d9129477b6452 872 TIGRFAM TIGR01524 ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 5 871 0.0 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 YE2585 2e18a4dbe1feccb26d0d9129477b6452 872 Pfam PF00690 Cation transporter/ATPase, N-terminus 1 63 9.8E-16 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal YE2585 2e18a4dbe1feccb26d0d9129477b6452 872 SUPERFAMILY SSF81653 132 242 2.09E-24 T 22-04-2016 YE2585 2e18a4dbe1feccb26d0d9129477b6452 872 Pfam PF00122 E1-E2 ATPase 85 333 1.6E-54 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 YE2585 2e18a4dbe1feccb26d0d9129477b6452 872 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 344 350 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site YE2585 2e18a4dbe1feccb26d0d9129477b6452 872 Pfam PF00702 haloacid dehalogenase-like hydrolase 338 626 7.6E-19 T 22-04-2016 YE2585 2e18a4dbe1feccb26d0d9129477b6452 872 PANTHER PTHR24093 1 871 0.0 T 22-04-2016 YE2585 2e18a4dbe1feccb26d0d9129477b6452 872 PANTHER PTHR24093:SF128 1 871 0.0 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 YE2585 2e18a4dbe1feccb26d0d9129477b6452 872 PRINTS PR01836 Magnesium-transporting ATPase signature 272 291 9.2E-89 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 YE2585 2e18a4dbe1feccb26d0d9129477b6452 872 PRINTS PR01836 Magnesium-transporting ATPase signature 255 271 9.2E-89 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 YE2585 2e18a4dbe1feccb26d0d9129477b6452 872 PRINTS PR01836 Magnesium-transporting ATPase signature 376 389 9.2E-89 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 YE2585 2e18a4dbe1feccb26d0d9129477b6452 872 PRINTS PR01836 Magnesium-transporting ATPase signature 740 756 9.2E-89 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 YE2585 2e18a4dbe1feccb26d0d9129477b6452 872 PRINTS PR01836 Magnesium-transporting ATPase signature 688 699 9.2E-89 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 YE2585 2e18a4dbe1feccb26d0d9129477b6452 872 PRINTS PR01836 Magnesium-transporting ATPase signature 825 846 9.2E-89 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 YE2585 2e18a4dbe1feccb26d0d9129477b6452 872 PRINTS PR01836 Magnesium-transporting ATPase signature 720 733 9.2E-89 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 YE2585 2e18a4dbe1feccb26d0d9129477b6452 872 PRINTS PR01836 Magnesium-transporting ATPase signature 670 685 9.2E-89 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 YE2585 2e18a4dbe1feccb26d0d9129477b6452 872 PRINTS PR01836 Magnesium-transporting ATPase signature 775 796 9.2E-89 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 YE2585 2e18a4dbe1feccb26d0d9129477b6452 872 SUPERFAMILY SSF56784 466 711 1.07E-34 T 22-04-2016 IPR023214 HAD-like domain YE2585 2e18a4dbe1feccb26d0d9129477b6452 872 SUPERFAMILY SSF56784 340 360 1.07E-34 T 22-04-2016 IPR023214 HAD-like domain YE2585 2e18a4dbe1feccb26d0d9129477b6452 872 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 239 378 2.7E-19 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 YE2585 2e18a4dbe1feccb26d0d9129477b6452 872 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 586 701 3.2E-28 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 YE2585 2e18a4dbe1feccb26d0d9129477b6452 872 SUPERFAMILY SSF81665 2 117 6.41E-102 T 22-04-2016 YE2585 2e18a4dbe1feccb26d0d9129477b6452 872 SUPERFAMILY SSF81665 243 336 6.41E-102 T 22-04-2016 YE2585 2e18a4dbe1feccb26d0d9129477b6452 872 SUPERFAMILY SSF81665 661 869 6.41E-102 T 22-04-2016 YE2585 2e18a4dbe1feccb26d0d9129477b6452 872 Gene3D G3DSA:3.40.1110.10 334 519 4.7E-31 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 YE2585 2e18a4dbe1feccb26d0d9129477b6452 872 SMART SM00831 1 68 9.1E-17 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal YE1555 5f1e96c8e5a5eab772dc9c6749c5e88e 233 Hamap MF_01802 Chromosome partition protein MukE [mukE]. 1 231 51.628 T 22-04-2016 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 YE1555 5f1e96c8e5a5eab772dc9c6749c5e88e 233 Pfam PF04288 MukE-like family 1 218 2.5E-126 T 22-04-2016 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 YE0148 67c8577fc84229ebeea0fa77182fbcc0 548 SUPERFAMILY SSF52467 184 342 4.91E-59 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain YE0148 67c8577fc84229ebeea0fa77182fbcc0 548 Gene3D G3DSA:3.40.50.970 1 169 6.1E-73 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE0148 67c8577fc84229ebeea0fa77182fbcc0 548 PANTHER PTHR18968:SF116 1 545 1.2E-261 T 22-04-2016 YE0148 67c8577fc84229ebeea0fa77182fbcc0 548 SUPERFAMILY SSF52518 357 545 7.68E-64 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE0148 67c8577fc84229ebeea0fa77182fbcc0 548 Gene3D G3DSA:3.40.50.970 335 537 3.4E-71 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE0148 67c8577fc84229ebeea0fa77182fbcc0 548 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 545 4.2E-216 T 22-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YE0148 67c8577fc84229ebeea0fa77182fbcc0 548 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 374 522 1.8E-48 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 YE0148 67c8577fc84229ebeea0fa77182fbcc0 548 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 186 321 6.0E-44 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 YE0148 67c8577fc84229ebeea0fa77182fbcc0 548 Gene3D G3DSA:3.40.50.1220 184 334 2.8E-59 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain YE0148 67c8577fc84229ebeea0fa77182fbcc0 548 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 164 1.2E-57 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 YE0148 67c8577fc84229ebeea0fa77182fbcc0 548 PANTHER PTHR18968 1 545 1.2E-261 T 22-04-2016 YE0148 67c8577fc84229ebeea0fa77182fbcc0 548 SUPERFAMILY SSF52518 1 176 3.68E-64 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE0148 67c8577fc84229ebeea0fa77182fbcc0 548 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 411 430 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 YE0838 5731ea3ecc52f55417adde7ce0c11c94 519 PANTHER PTHR38761 2 518 1.7E-303 T 22-04-2016 YE0838 5731ea3ecc52f55417adde7ce0c11c94 519 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 6 514 5.2E-255 T 22-04-2016 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 YE0838 5731ea3ecc52f55417adde7ce0c11c94 519 Pfam PF04262 Glutamate-cysteine ligase 10 380 1.5E-172 T 22-04-2016 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 YE0838 5731ea3ecc52f55417adde7ce0c11c94 519 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 519 228.056 T 22-04-2016 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 YE0838 5731ea3ecc52f55417adde7ce0c11c94 519 SUPERFAMILY SSF55931 4 514 1.7E-203 T 22-04-2016 YE1075 1aaa28d7e66a4c8f522ca600c02c583f 206 Pfam PF09976 Tetratricopeptide repeat-like domain 15 205 1.4E-57 T 22-04-2016 IPR018704 Tetratricopeptide repeat-like domain YE1075 1aaa28d7e66a4c8f522ca600c02c583f 206 Gene3D G3DSA:1.25.40.10 92 190 8.2E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YE1075 1aaa28d7e66a4c8f522ca600c02c583f 206 PIRSF PIRSF006170 1 206 2.7E-57 T 22-04-2016 IPR026039 Uncharacterised protein family UPF0070 YE1075 1aaa28d7e66a4c8f522ca600c02c583f 206 SUPERFAMILY SSF48452 91 191 1.52E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YE1075 1aaa28d7e66a4c8f522ca600c02c583f 206 PANTHER PTHR38035 2 206 1.7E-90 T 22-04-2016 YE3088 328ecda5f1e23d0a8f8dcb9d7df0f4de 322 PANTHER PTHR11108 1 320 9.1E-142 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 YE3088 328ecda5f1e23d0a8f8dcb9d7df0f4de 322 Gene3D G3DSA:3.40.50.1400 201 320 1.2E-33 T 22-04-2016 YE3088 328ecda5f1e23d0a8f8dcb9d7df0f4de 322 TIGRFAM TIGR00109 hemH: ferrochelatase 1 320 2.3E-109 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 YE3088 328ecda5f1e23d0a8f8dcb9d7df0f4de 322 ProSitePatterns PS00534 Ferrochelatase signature. 189 207 - T 22-04-2016 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 YE3088 328ecda5f1e23d0a8f8dcb9d7df0f4de 322 SUPERFAMILY SSF53800 4 321 1.57E-100 T 22-04-2016 YE3088 328ecda5f1e23d0a8f8dcb9d7df0f4de 322 Hamap MF_00323 Ferrochelatase [hemH]. 4 320 37.974 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 YE3088 328ecda5f1e23d0a8f8dcb9d7df0f4de 322 Gene3D G3DSA:3.40.50.1400 3 200 4.4E-68 T 22-04-2016 YE3088 328ecda5f1e23d0a8f8dcb9d7df0f4de 322 Pfam PF00762 Ferrochelatase 6 320 7.5E-109 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 YE1151 74cc4cf9de8c74e9228749665ec5ecf4 1043 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 2.1E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE1151 74cc4cf9de8c74e9228749665ec5ecf4 1043 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 2.1E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE1151 74cc4cf9de8c74e9228749665ec5ecf4 1043 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 2.1E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE1151 74cc4cf9de8c74e9228749665ec5ecf4 1043 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 2.1E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE1151 74cc4cf9de8c74e9228749665ec5ecf4 1043 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 2.1E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE1151 74cc4cf9de8c74e9228749665ec5ecf4 1043 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 2.1E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE1151 74cc4cf9de8c74e9228749665ec5ecf4 1043 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 2.1E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE1151 74cc4cf9de8c74e9228749665ec5ecf4 1043 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 2.1E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE1151 74cc4cf9de8c74e9228749665ec5ecf4 1043 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 2.1E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE1151 74cc4cf9de8c74e9228749665ec5ecf4 1043 SUPERFAMILY SSF82714 723 810 9.16E-23 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YE1151 74cc4cf9de8c74e9228749665ec5ecf4 1043 SUPERFAMILY SSF82693 39 131 3.49E-27 T 22-04-2016 YE1151 74cc4cf9de8c74e9228749665ec5ecf4 1043 SUPERFAMILY SSF82693 136 182 1.27E-24 T 22-04-2016 YE1151 74cc4cf9de8c74e9228749665ec5ecf4 1043 SUPERFAMILY SSF82693 274 330 1.27E-24 T 22-04-2016 YE1151 74cc4cf9de8c74e9228749665ec5ecf4 1043 Gene3D G3DSA:1.10.3850.10 279 498 3.1E-59 T 22-04-2016 YE1151 74cc4cf9de8c74e9228749665ec5ecf4 1043 Gene3D G3DSA:1.10.3850.10 815 1028 3.6E-55 T 22-04-2016 YE1151 74cc4cf9de8c74e9228749665ec5ecf4 1043 SUPERFAMILY SSF82693 566 672 1.05E-27 T 22-04-2016 YE1151 74cc4cf9de8c74e9228749665ec5ecf4 1043 SUPERFAMILY SSF82714 182 272 6.41E-23 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YE1151 74cc4cf9de8c74e9228749665ec5ecf4 1043 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1041 0.0 T 22-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 YE1151 74cc4cf9de8c74e9228749665ec5ecf4 1043 Gene3D G3DSA:3.30.70.1430 568 672 1.1E-31 T 22-04-2016 YE1151 74cc4cf9de8c74e9228749665ec5ecf4 1043 Gene3D G3DSA:3.30.2090.10 722 811 4.6E-27 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YE1151 74cc4cf9de8c74e9228749665ec5ecf4 1043 Gene3D G3DSA:3.30.2090.10 181 275 5.9E-28 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YE1151 74cc4cf9de8c74e9228749665ec5ecf4 1043 PANTHER PTHR32063:SF32 1 1034 0.0 T 22-04-2016 YE1151 74cc4cf9de8c74e9228749665ec5ecf4 1043 SUPERFAMILY SSF82866 298 497 7.19E-48 T 22-04-2016 YE1151 74cc4cf9de8c74e9228749665ec5ecf4 1043 Gene3D G3DSA:3.30.70.1430 39 139 1.0E-34 T 22-04-2016 YE1151 74cc4cf9de8c74e9228749665ec5ecf4 1043 Pfam PF00873 AcrB/AcrD/AcrF family 1 1027 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE1151 74cc4cf9de8c74e9228749665ec5ecf4 1043 SUPERFAMILY SSF82866 807 1031 3.53E-45 T 22-04-2016 YE1151 74cc4cf9de8c74e9228749665ec5ecf4 1043 PANTHER PTHR32063 1 1034 0.0 T 22-04-2016 YE1760 faebca7e499190c5eee9f69b0a904262 89 Pfam PF13269 Protein of unknown function (DUF4060) 11 83 3.3E-40 T 22-04-2016 IPR025135 Protein of unknown function DUF4060 YE1010 d72eaa35cf08109f7a6b03c86a4d0396 191 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 1 189 2.4E-99 T 22-04-2016 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE1010 d72eaa35cf08109f7a6b03c86a4d0396 191 PANTHER PTHR30173 1 186 1.1E-54 T 22-04-2016 YE1010 d72eaa35cf08109f7a6b03c86a4d0396 191 SUPERFAMILY SSF88659 122 183 5.23E-18 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE1010 d72eaa35cf08109f7a6b03c86a4d0396 191 PANTHER PTHR30173:SF1 1 186 1.1E-54 T 22-04-2016 YE1010 d72eaa35cf08109f7a6b03c86a4d0396 191 Gene3D G3DSA:1.10.10.10 122 187 2.8E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1010 d72eaa35cf08109f7a6b03c86a4d0396 191 Gene3D G3DSA:1.10.1740.10 2 109 3.5E-36 T 22-04-2016 YE1010 d72eaa35cf08109f7a6b03c86a4d0396 191 Pfam PF08281 Sigma-70, region 4 129 180 1.1E-18 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE1010 d72eaa35cf08109f7a6b03c86a4d0396 191 SUPERFAMILY SSF88946 2 103 6.75E-30 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE1010 d72eaa35cf08109f7a6b03c86a4d0396 191 Pfam PF04542 Sigma-70 region 2 25 91 1.2E-16 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE1010 d72eaa35cf08109f7a6b03c86a4d0396 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 183 4.3E-30 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE1010 d72eaa35cf08109f7a6b03c86a4d0396 191 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 46 77 - T 22-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE3658 b6266ac80eca1ac2ddbf006c9620c0e3 101 Gene3D G3DSA:3.30.70.900 1 99 5.6E-34 T 22-04-2016 YE3658 b6266ac80eca1ac2ddbf006c9620c0e3 101 SUPERFAMILY SSF54909 1 97 9.91E-29 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel YE3658 b6266ac80eca1ac2ddbf006c9620c0e3 101 PANTHER PTHR33336 1 101 3.3E-16 T 22-04-2016 YE3658 b6266ac80eca1ac2ddbf006c9620c0e3 101 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 84 7.3E-17 T 22-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain YE1303 2610ddb6a773b645e4464249431e3104 493 Gene3D G3DSA:1.10.10.10 12 85 8.0E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1303 2610ddb6a773b645e4464249431e3104 493 SUPERFAMILY SSF53383 104 488 7.29E-97 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YE1303 2610ddb6a773b645e4464249431e3104 493 PANTHER PTHR11751 105 492 7.4E-99 T 22-04-2016 YE1303 2610ddb6a773b645e4464249431e3104 493 Gene3D G3DSA:3.90.1150.10 371 487 5.2E-6 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YE1303 2610ddb6a773b645e4464249431e3104 493 Gene3D G3DSA:3.40.640.10 153 370 3.7E-72 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YE1303 2610ddb6a773b645e4464249431e3104 493 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 84 1.0E-17 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YE1303 2610ddb6a773b645e4464249431e3104 493 Pfam PF00155 Aminotransferase class I and II 153 482 1.2E-29 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YE1303 2610ddb6a773b645e4464249431e3104 493 PANTHER PTHR11751:SF294 105 492 7.4E-99 T 22-04-2016 YE1303 2610ddb6a773b645e4464249431e3104 493 SUPERFAMILY SSF46785 14 88 6.2E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1303 2610ddb6a773b645e4464249431e3104 493 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 58 2.4E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YE1303 2610ddb6a773b645e4464249431e3104 493 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 58 74 2.4E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YE1303 2610ddb6a773b645e4464249431e3104 493 SMART SM00345 25 84 4.8E-18 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YE3622 0d41641cc0c5a8d223b2cfe974de4070 458 Gene3D G3DSA:2.60.40.10 20 171 2.5E-46 T 22-04-2016 IPR013783 Immunoglobulin-like fold YE3622 0d41641cc0c5a8d223b2cfe974de4070 458 SUPERFAMILY SSF53474 191 438 4.23E-49 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE3622 0d41641cc0c5a8d223b2cfe974de4070 458 SUPERFAMILY SSF81296 24 176 1.3E-42 T 22-04-2016 IPR014756 Immunoglobulin E-set YE3622 0d41641cc0c5a8d223b2cfe974de4070 458 Pfam PF11806 Domain of unknown function (DUF3327) 53 182 4.2E-38 T 22-04-2016 IPR021764 Enterochelin esterase, N-terminal GO:0005506|GO:0005737|GO:0006826|GO:0008849 YE3622 0d41641cc0c5a8d223b2cfe974de4070 458 PANTHER PTHR10907 91 397 1.6E-53 T 22-04-2016 YE3622 0d41641cc0c5a8d223b2cfe974de4070 458 Pfam PF00756 Putative esterase 205 431 2.5E-34 T 22-04-2016 IPR000801 Putative esterase YE3622 0d41641cc0c5a8d223b2cfe974de4070 458 PANTHER PTHR10907:SF55 91 397 1.6E-53 T 22-04-2016 YE3622 0d41641cc0c5a8d223b2cfe974de4070 458 Gene3D G3DSA:3.40.50.1820 194 441 1.5E-68 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE0651 698029af7aa221d565817882c591f0ce 206 Gene3D G3DSA:3.20.19.10 3 201 5.1E-48 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YE0651 698029af7aa221d565817882c591f0ce 206 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 9 194 1.2E-96 T 22-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YE0651 698029af7aa221d565817882c591f0ce 206 PANTHER PTHR11670 10 206 4.6E-118 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YE0651 698029af7aa221d565817882c591f0ce 206 PANTHER PTHR11670:SF27 10 206 4.6E-118 T 22-04-2016 YE0651 698029af7aa221d565817882c591f0ce 206 SUPERFAMILY SSF52016 4 203 4.51E-61 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YE0651 698029af7aa221d565817882c591f0ce 206 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 7 205 44.677 T 22-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YE0651 698029af7aa221d565817882c591f0ce 206 Pfam PF00694 Aconitase C-terminal domain 9 131 1.8E-39 T 22-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YE1560 8f12a135112930e5cac794d04b50a7f1 509 Pfam PF12792 CSS motif domain associated with EAL 42 231 1.8E-36 T 22-04-2016 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain YE1560 8f12a135112930e5cac794d04b50a7f1 509 SMART SM00052 256 502 1.6E-97 T 22-04-2016 IPR001633 EAL domain YE1560 8f12a135112930e5cac794d04b50a7f1 509 PANTHER PTHR33121 203 507 6.5E-100 T 22-04-2016 YE1560 8f12a135112930e5cac794d04b50a7f1 509 Gene3D G3DSA:3.20.20.450 263 507 2.0E-78 T 22-04-2016 IPR001633 EAL domain YE1560 8f12a135112930e5cac794d04b50a7f1 509 SUPERFAMILY SSF141868 263 508 4.18E-75 T 22-04-2016 IPR001633 EAL domain YE1560 8f12a135112930e5cac794d04b50a7f1 509 Pfam PF00563 EAL domain 263 497 1.4E-62 T 22-04-2016 IPR001633 EAL domain YE1560 8f12a135112930e5cac794d04b50a7f1 509 PANTHER PTHR33121:SF1 203 507 6.5E-100 T 22-04-2016 YE0791 709f9c32ab65a01519259a84be7dc401 716 SUPERFAMILY SSF52540 476 703 1.71E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0791 709f9c32ab65a01519259a84be7dc401 716 Pfam PF00005 ABC transporter 502 649 5.5E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE0791 709f9c32ab65a01519259a84be7dc401 716 Gene3D G3DSA:1.20.1560.10 167 438 1.4E-25 T 22-04-2016 YE0791 709f9c32ab65a01519259a84be7dc401 716 PANTHER PTHR24221:SF161 169 699 1.6E-73 T 22-04-2016 YE0791 709f9c32ab65a01519259a84be7dc401 716 SMART SM00382 509 697 6.0E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain YE0791 709f9c32ab65a01519259a84be7dc401 716 SUPERFAMILY SSF90123 167 444 4.97E-32 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YE0791 709f9c32ab65a01519259a84be7dc401 716 PANTHER PTHR24221 169 699 1.6E-73 T 22-04-2016 YE0791 709f9c32ab65a01519259a84be7dc401 716 Gene3D G3DSA:3.40.50.300 487 703 7.6E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0791 709f9c32ab65a01519259a84be7dc401 716 Gene3D G3DSA:3.90.70.10 12 133 4.8E-19 T 22-04-2016 YE0791 709f9c32ab65a01519259a84be7dc401 716 ProSitePatterns PS00211 ABC transporters family signature. 621 635 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE0791 709f9c32ab65a01519259a84be7dc401 716 Pfam PF00664 ABC transporter transmembrane region 171 430 5.0E-11 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YE0791 709f9c32ab65a01519259a84be7dc401 716 Pfam PF03412 Peptidase C39 family 8 133 1.8E-23 T 22-04-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 YE0020 19afc74df75d98ad80ab4aa84ef5e91a 207 PANTHER PTHR35891:SF2 1 207 9.3E-101 T 22-04-2016 YE0020 19afc74df75d98ad80ab4aa84ef5e91a 207 Gene3D G3DSA:3.40.30.10 120 204 2.1E-24 T 22-04-2016 IPR012336 Thioredoxin-like fold YE0020 19afc74df75d98ad80ab4aa84ef5e91a 207 Gene3D G3DSA:3.40.30.10 1 118 2.3E-41 T 22-04-2016 IPR012336 Thioredoxin-like fold YE0020 19afc74df75d98ad80ab4aa84ef5e91a 207 PIRSF PIRSF001488 1 207 3.8E-90 T 22-04-2016 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL YE0020 19afc74df75d98ad80ab4aa84ef5e91a 207 Pfam PF01323 DSBA-like thioredoxin domain 40 195 6.4E-29 T 22-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 YE0020 19afc74df75d98ad80ab4aa84ef5e91a 207 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 YE0020 19afc74df75d98ad80ab4aa84ef5e91a 207 PANTHER PTHR35891 1 207 9.3E-101 T 22-04-2016 YE0020 19afc74df75d98ad80ab4aa84ef5e91a 207 SUPERFAMILY SSF52833 20 204 1.76E-46 T 22-04-2016 IPR012336 Thioredoxin-like fold YE0145 26ef82caa05d67f09755940b31b9e618 293 Gene3D G3DSA:1.10.10.10 2 82 3.6E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0145 26ef82caa05d67f09755940b31b9e618 293 Gene3D G3DSA:3.40.190.10 84 171 4.7E-9 T 22-04-2016 YE0145 26ef82caa05d67f09755940b31b9e618 293 PANTHER PTHR30579:SF0 1 280 4.3E-107 T 22-04-2016 YE0145 26ef82caa05d67f09755940b31b9e618 293 SUPERFAMILY SSF46785 2 82 3.97E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0145 26ef82caa05d67f09755940b31b9e618 293 SUPERFAMILY SSF53850 88 281 2.58E-20 T 22-04-2016 YE0145 26ef82caa05d67f09755940b31b9e618 293 Pfam PF03466 LysR substrate binding domain 88 280 1.6E-19 T 22-04-2016 IPR005119 LysR, substrate-binding YE0145 26ef82caa05d67f09755940b31b9e618 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.5E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE0145 26ef82caa05d67f09755940b31b9e618 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.5E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE0145 26ef82caa05d67f09755940b31b9e618 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.5E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE0145 26ef82caa05d67f09755940b31b9e618 293 Hamap MF_01233 HTH-type transcriptional regulator HdfR [hdfR]. 1 287 58.016 T 22-04-2016 IPR020890 Transcription regulator HTH, HdfR GO:0003677|GO:0003700|GO:0045892 YE0145 26ef82caa05d67f09755940b31b9e618 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.2E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE0145 26ef82caa05d67f09755940b31b9e618 293 PANTHER PTHR30579 1 280 4.3E-107 T 22-04-2016 YE4068 d9ed6ee46527d0ca3962a056c940c4df 159 SUPERFAMILY SSF49785 23 147 1.49E-23 T 22-04-2016 IPR008979 Galactose-binding domain-like YE4068 d9ed6ee46527d0ca3962a056c940c4df 159 Gene3D G3DSA:2.60.120.260 23 150 8.9E-23 T 22-04-2016 IPR008979 Galactose-binding domain-like YE4068 d9ed6ee46527d0ca3962a056c940c4df 159 Pfam PF00754 F5/8 type C domain 27 145 1.6E-17 T 22-04-2016 IPR000421 Coagulation factor 5/8 C-terminal domain YE0663 0fb2578ace45047901c597f5e59d0f4d 152 SUPERFAMILY SSF89447 1 138 2.3E-45 T 22-04-2016 YE0663 0fb2578ace45047901c597f5e59d0f4d 152 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 152 56.73 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 YE0663 0fb2578ace45047901c597f5e59d0f4d 152 Pfam PF02381 MraZ protein, putative antitoxin-like 77 142 1.5E-20 T 22-04-2016 IPR020603 MraZ domain YE0663 0fb2578ace45047901c597f5e59d0f4d 152 Pfam PF02381 MraZ protein, putative antitoxin-like 1 75 9.7E-22 T 22-04-2016 IPR020603 MraZ domain YE0663 0fb2578ace45047901c597f5e59d0f4d 152 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 141 6.0E-77 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 YE0663 0fb2578ace45047901c597f5e59d0f4d 152 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 152 7.3E-62 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 YE0663 0fb2578ace45047901c597f5e59d0f4d 152 PANTHER PTHR34701 2 151 6.1E-67 T 22-04-2016 YE0645 b183f22ef7036378141420856a2e0fd1 299 PANTHER PTHR30352:SF4 100 299 1.3E-104 T 22-04-2016 YE0645 b183f22ef7036378141420856a2e0fd1 299 PANTHER PTHR30352:SF4 1 54 1.3E-104 T 22-04-2016 YE0645 b183f22ef7036378141420856a2e0fd1 299 PANTHER PTHR30352 100 299 1.3E-104 T 22-04-2016 YE0645 b183f22ef7036378141420856a2e0fd1 299 PANTHER PTHR30352 1 54 1.3E-104 T 22-04-2016 YE0645 b183f22ef7036378141420856a2e0fd1 299 Pfam PF04055 Radical SAM superfamily 19 228 1.4E-24 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 YE0645 b183f22ef7036378141420856a2e0fd1 299 TIGRFAM TIGR02494 PFLE_PFLC: glycyl-radical enzyme activating protein 2 290 1.2E-103 T 22-04-2016 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 YE0645 b183f22ef7036378141420856a2e0fd1 299 Pfam PF13353 4Fe-4S single cluster domain 12 155 4.2E-13 T 22-04-2016 YE0645 b183f22ef7036378141420856a2e0fd1 299 PIRSF PIRSF000371 1 297 1.0E-93 T 22-04-2016 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 YE0645 b183f22ef7036378141420856a2e0fd1 299 SUPERFAMILY SSF102114 109 262 5.49E-18 T 22-04-2016 YE0645 b183f22ef7036378141420856a2e0fd1 299 Gene3D G3DSA:3.80.30.10 122 297 9.2E-56 T 22-04-2016 YE0645 b183f22ef7036378141420856a2e0fd1 299 ProSitePatterns PS01087 Radical activating enzymes signature. 13 34 - T 22-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 YE0645 b183f22ef7036378141420856a2e0fd1 299 SUPERFAMILY SSF54862 4 141 2.42E-7 T 22-04-2016 YE0580 5a5a50ed7c0bc5cbc8141b3f0453303c 427 Gene3D G3DSA:3.40.50.620 64 230 9.2E-53 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YE0580 5a5a50ed7c0bc5cbc8141b3f0453303c 427 SUPERFAMILY SSF52374 64 231 1.13E-19 T 22-04-2016 YE0580 5a5a50ed7c0bc5cbc8141b3f0453303c 427 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 66 136 4.4E-19 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 YE0580 5a5a50ed7c0bc5cbc8141b3f0453303c 427 PIRSF PIRSF004776 2 415 2.9E-218 T 22-04-2016 IPR016429 Bifunctional transcriptional regulator NadR GO:0045892 KEGG: 00760+2.7.7.1+2.7.1.22|UniPathway: UPA00253|UniPathway: UPA00253 YE0580 5a5a50ed7c0bc5cbc8141b3f0453303c 427 SMART SM00530 6 62 6.3E-8 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YE0580 5a5a50ed7c0bc5cbc8141b3f0453303c 427 Gene3D G3DSA:3.40.50.300 231 400 2.4E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0580 5a5a50ed7c0bc5cbc8141b3f0453303c 427 SUPERFAMILY SSF52540 232 404 8.51E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0580 5a5a50ed7c0bc5cbc8141b3f0453303c 427 TIGRFAM TIGR01526 nadR_NMN_Atrans: nicotinamide-nucleotide adenylyltransferase 64 395 2.6E-154 T 22-04-2016 IPR006417 Nicotinamide-nucleotide adenylyltransferase GO:0003677|GO:0006355|GO:0006810|GO:0019363 KEGG: 00760+2.7.7.1+2.7.1.22|UniPathway: UPA00253|UniPathway: UPA00253 YE0580 5a5a50ed7c0bc5cbc8141b3f0453303c 427 Pfam PF01381 Helix-turn-helix 7 58 2.1E-8 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YE0580 5a5a50ed7c0bc5cbc8141b3f0453303c 427 SUPERFAMILY SSF47413 6 59 6.22E-9 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE0580 5a5a50ed7c0bc5cbc8141b3f0453303c 427 Gene3D G3DSA:1.10.260.40 6 58 2.9E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE0580 5a5a50ed7c0bc5cbc8141b3f0453303c 427 Pfam PF13521 AAA domain 234 394 6.3E-33 T 22-04-2016 YE0580 5a5a50ed7c0bc5cbc8141b3f0453303c 427 PANTHER PTHR37512 14 417 2.5E-155 T 22-04-2016 YE0189 90570e35312ee9c2e6cb6a4fbf2f7778 848 Pfam PF12633 Adenylate cyclase NT domain 5 200 9.5E-81 T 22-04-2016 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 YE0189 90570e35312ee9c2e6cb6a4fbf2f7778 848 Pfam PF01295 Adenylate cyclase, class-I 228 825 1.4E-261 T 22-04-2016 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 YE0189 90570e35312ee9c2e6cb6a4fbf2f7778 848 ProSitePatterns PS01093 Adenylate cyclase class-I signature 2. 598 612 - T 22-04-2016 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 YE0189 90570e35312ee9c2e6cb6a4fbf2f7778 848 PIRSF PIRSF001444 1 847 0.0 T 22-04-2016 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 YE0189 90570e35312ee9c2e6cb6a4fbf2f7778 848 ProSitePatterns PS01092 Adenylate cyclase class-I signature 1. 242 253 - T 22-04-2016 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 YE0189 90570e35312ee9c2e6cb6a4fbf2f7778 848 PANTHER PTHR38760 2 848 0.0 T 22-04-2016 YE2759 870f5f26cf3bacd21a61b8142b916dc6 462 PANTHER PTHR11785 17 462 0.0 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YE2759 870f5f26cf3bacd21a61b8142b916dc6 462 Pfam PF13520 Amino acid permease 53 420 2.3E-33 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YE2759 870f5f26cf3bacd21a61b8142b916dc6 462 PANTHER PTHR11785:SF350 17 462 0.0 T 22-04-2016 YE2759 870f5f26cf3bacd21a61b8142b916dc6 462 PIRSF PIRSF006060 7 455 2.9E-70 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YE1909 ddb5b82cb7e123f3167580e681ad5e13 237 PANTHER PTHR36111:SF1 1 237 2.7E-65 T 22-04-2016 YE1909 ddb5b82cb7e123f3167580e681ad5e13 237 PANTHER PTHR36111 1 237 2.7E-65 T 22-04-2016 YE1909 ddb5b82cb7e123f3167580e681ad5e13 237 Pfam PF04474 Protein of unknown function (DUF554) 2 229 1.8E-62 T 22-04-2016 IPR007563 Protein of unknown function DUF554 YE2661 1a178e93a5092cd55fa1b7021319809b 363 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE2661 1a178e93a5092cd55fa1b7021319809b 363 PANTHER PTHR24220:SF536 21 350 7.6E-220 T 22-04-2016 YE2661 1a178e93a5092cd55fa1b7021319809b 363 PANTHER PTHR24220 21 350 7.6E-220 T 22-04-2016 YE2661 1a178e93a5092cd55fa1b7021319809b 363 Gene3D G3DSA:3.40.50.300 16 251 5.9E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2661 1a178e93a5092cd55fa1b7021319809b 363 SMART SM00382 44 227 2.6E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain YE2661 1a178e93a5092cd55fa1b7021319809b 363 SUPERFAMILY SSF50331 253 358 1.65E-13 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal YE2661 1a178e93a5092cd55fa1b7021319809b 363 Pfam PF08402 TOBE domain 287 358 4.4E-10 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 YE2661 1a178e93a5092cd55fa1b7021319809b 363 Pfam PF00005 ABC transporter 36 177 1.1E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE2661 1a178e93a5092cd55fa1b7021319809b 363 SUPERFAMILY SSF52540 20 259 6.93E-87 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3955 677797853f26d0ffd9d0cda9ef8774c2 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 8.8E-11 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 YE3955 677797853f26d0ffd9d0cda9ef8774c2 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 8.8E-11 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 YE3955 677797853f26d0ffd9d0cda9ef8774c2 210 Pfam PF00027 Cyclic nucleotide-binding domain 23 109 6.4E-24 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain YE3955 677797853f26d0ffd9d0cda9ef8774c2 210 ProSitePatterns PS00042 Crp-type HTH domain signature. 168 191 - T 22-04-2016 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 YE3955 677797853f26d0ffd9d0cda9ef8774c2 210 Gene3D G3DSA:1.10.10.10 144 207 1.1E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3955 677797853f26d0ffd9d0cda9ef8774c2 210 SUPERFAMILY SSF46785 139 207 3.64E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3955 677797853f26d0ffd9d0cda9ef8774c2 210 SMART SM00419 160 208 4.5E-17 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 YE3955 677797853f26d0ffd9d0cda9ef8774c2 210 Pfam PF00325 Bacterial regulatory proteins, crp family 166 197 1.7E-15 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 YE3955 677797853f26d0ffd9d0cda9ef8774c2 210 PANTHER PTHR24567:SF27 1 207 1.4E-156 T 22-04-2016 YE3955 677797853f26d0ffd9d0cda9ef8774c2 210 Gene3D G3DSA:2.60.120.10 6 143 1.2E-44 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YE3955 677797853f26d0ffd9d0cda9ef8774c2 210 SUPERFAMILY SSF51206 8 136 1.23E-35 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like YE3955 677797853f26d0ffd9d0cda9ef8774c2 210 PANTHER PTHR24567 1 207 1.4E-156 T 22-04-2016 YE3955 677797853f26d0ffd9d0cda9ef8774c2 210 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 89 - T 22-04-2016 IPR018488 Cyclic nucleotide-binding, conserved site YE3955 677797853f26d0ffd9d0cda9ef8774c2 210 SMART SM00100 2 122 1.1E-26 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain YE3955 677797853f26d0ffd9d0cda9ef8774c2 210 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 22-04-2016 IPR018488 Cyclic nucleotide-binding, conserved site YE1364 5c260bee8a3f7da6030a01e79432bd40 330 SUPERFAMILY SSF53822 62 317 3.53E-52 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YE1364 5c260bee8a3f7da6030a01e79432bd40 330 PANTHER PTHR30146:SF37 4 330 3.2E-223 T 22-04-2016 YE1364 5c260bee8a3f7da6030a01e79432bd40 330 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE1364 5c260bee8a3f7da6030a01e79432bd40 330 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 50 2.7E-17 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE1364 5c260bee8a3f7da6030a01e79432bd40 330 PANTHER PTHR30146 4 330 3.2E-223 T 22-04-2016 YE1364 5c260bee8a3f7da6030a01e79432bd40 330 SUPERFAMILY SSF47413 4 53 2.09E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE1364 5c260bee8a3f7da6030a01e79432bd40 330 SMART SM00354 5 75 5.0E-18 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE1364 5c260bee8a3f7da6030a01e79432bd40 330 Gene3D G3DSA:1.10.260.40 4 52 7.7E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE1364 5c260bee8a3f7da6030a01e79432bd40 330 Gene3D G3DSA:3.40.50.2300 62 173 1.2E-32 T 22-04-2016 YE1364 5c260bee8a3f7da6030a01e79432bd40 330 Gene3D G3DSA:3.40.50.2300 174 326 7.3E-39 T 22-04-2016 YE1364 5c260bee8a3f7da6030a01e79432bd40 330 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 64 311 4.5E-24 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain YE2386 b80165cd266c324e1a53327764f0e06a 320 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 5 311 53.659 T 22-04-2016 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24|UniPathway: UPA00030|UniPathway: UPA00360 YE2386 b80165cd266c324e1a53327764f0e06a 320 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 11 315 1.7E-132 T 22-04-2016 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24|UniPathway: UPA00030|UniPathway: UPA00360 YE2386 b80165cd266c324e1a53327764f0e06a 320 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 14 306 3.1E-94 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 YE2386 b80165cd266c324e1a53327764f0e06a 320 PANTHER PTHR30606 10 320 6.1E-208 T 22-04-2016 YE2386 b80165cd266c324e1a53327764f0e06a 320 PANTHER PTHR30606:SF4 10 320 6.1E-208 T 22-04-2016 YE2386 b80165cd266c324e1a53327764f0e06a 320 PIRSF PIRSF026649 11 315 3.9E-91 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 YE3072 32b79f8daee4c0550cb56fa9e69a2175 456 SUPERFAMILY SSF55957 373 456 2.2E-15 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YE3072 32b79f8daee4c0550cb56fa9e69a2175 456 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 378 452 1.3E-8 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YE3072 32b79f8daee4c0550cb56fa9e69a2175 456 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 154 258 3.1E-20 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YE3072 32b79f8daee4c0550cb56fa9e69a2175 456 PANTHER PTHR22573 7 456 3.4E-176 T 22-04-2016 YE3072 32b79f8daee4c0550cb56fa9e69a2175 456 SUPERFAMILY SSF53738 263 368 1.02E-30 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YE3072 32b79f8daee4c0550cb56fa9e69a2175 456 Gene3D G3DSA:3.40.120.10 256 368 8.5E-37 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YE3072 32b79f8daee4c0550cb56fa9e69a2175 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 209 222 5.3E-29 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YE3072 32b79f8daee4c0550cb56fa9e69a2175 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 170 189 5.3E-29 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YE3072 32b79f8daee4c0550cb56fa9e69a2175 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 91 105 5.3E-29 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YE3072 32b79f8daee4c0550cb56fa9e69a2175 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 238 253 5.3E-29 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YE3072 32b79f8daee4c0550cb56fa9e69a2175 456 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 92 101 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YE3072 32b79f8daee4c0550cb56fa9e69a2175 456 Gene3D G3DSA:3.40.120.10 173 254 5.2E-28 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YE3072 32b79f8daee4c0550cb56fa9e69a2175 456 SUPERFAMILY SSF53738 5 176 1.73E-37 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YE3072 32b79f8daee4c0550cb56fa9e69a2175 456 Gene3D G3DSA:3.40.120.10 6 148 2.1E-34 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YE3072 32b79f8daee4c0550cb56fa9e69a2175 456 PANTHER PTHR22573:SF18 7 456 3.4E-176 T 22-04-2016 YE3072 32b79f8daee4c0550cb56fa9e69a2175 456 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 263 373 3.5E-25 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YE3072 32b79f8daee4c0550cb56fa9e69a2175 456 SUPERFAMILY SSF53738 153 261 4.32E-26 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YE3072 32b79f8daee4c0550cb56fa9e69a2175 456 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 7 127 1.5E-31 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YE3072 32b79f8daee4c0550cb56fa9e69a2175 456 Gene3D G3DSA:3.30.310.50 374 455 6.8E-15 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 YE0292 f279be8dfb600bbd8db9da3081381f59 203 Pfam PF02581 Thiamine monophosphate synthase/TENI 7 175 1.5E-56 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 YE0292 f279be8dfb600bbd8db9da3081381f59 203 PANTHER PTHR20857 1 193 1.6E-68 T 22-04-2016 YE0292 f279be8dfb600bbd8db9da3081381f59 203 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 8 188 1.6E-58 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 YE0292 f279be8dfb600bbd8db9da3081381f59 203 Gene3D G3DSA:3.20.20.70 1 193 3.0E-69 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YE0292 f279be8dfb600bbd8db9da3081381f59 203 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 1 193 19.764 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 YE0292 f279be8dfb600bbd8db9da3081381f59 203 SUPERFAMILY SSF51391 1 193 1.14E-63 T 22-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 YE2460 71a73672308cd490f8525b1261aef8b6 255 PANTHER PTHR11751 17 108 2.2E-45 T 22-04-2016 YE2460 71a73672308cd490f8525b1261aef8b6 255 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 20 249 1.0E-106 T 22-04-2016 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 UniPathway: UPA00379 YE2460 71a73672308cd490f8525b1261aef8b6 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 58 74 1.2E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YE2460 71a73672308cd490f8525b1261aef8b6 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 58 1.2E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YE2460 71a73672308cd490f8525b1261aef8b6 255 SMART SM00866 105 242 1.4E-34 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 YE2460 71a73672308cd490f8525b1261aef8b6 255 Pfam PF07702 UTRA domain 105 242 2.2E-35 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 YE2460 71a73672308cd490f8525b1261aef8b6 255 SMART SM00345 25 84 1.7E-20 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YE2460 71a73672308cd490f8525b1261aef8b6 255 PANTHER PTHR11751:SF364 17 108 2.2E-45 T 22-04-2016 YE2460 71a73672308cd490f8525b1261aef8b6 255 Gene3D G3DSA:1.10.10.10 17 90 7.1E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2460 71a73672308cd490f8525b1261aef8b6 255 Gene3D G3DSA:3.40.1410.10 102 237 2.4E-50 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain YE2460 71a73672308cd490f8525b1261aef8b6 255 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 84 5.4E-21 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YE2460 71a73672308cd490f8525b1261aef8b6 255 SUPERFAMILY SSF64288 72 248 8.64E-44 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain YE2460 71a73672308cd490f8525b1261aef8b6 255 SUPERFAMILY SSF46785 18 88 7.81E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2428 5111fd8ac68ee5e0b33649658f0e443f 269 Pfam PF13369 Transglutaminase-like superfamily 33 184 6.1E-43 T 22-04-2016 IPR032698 Protein SirB1, N-terminal YE2428 5111fd8ac68ee5e0b33649658f0e443f 269 Gene3D G3DSA:1.25.40.10 188 258 7.9E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YE2428 5111fd8ac68ee5e0b33649658f0e443f 269 SUPERFAMILY SSF48452 190 258 1.94E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YE2428 5111fd8ac68ee5e0b33649658f0e443f 269 Pfam PF13371 Tetratricopeptide repeat 187 258 2.7E-26 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YE2428 5111fd8ac68ee5e0b33649658f0e443f 269 PANTHER PTHR31350 24 265 1.3E-58 T 22-04-2016 YE1705 42c2b6640fafc3ea1d9e2e6449505db7 341 SUPERFAMILY SSF51445 3 297 2.32E-84 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YE1705 42c2b6640fafc3ea1d9e2e6449505db7 341 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 11 291 1.1E-94 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YE1705 42c2b6640fafc3ea1d9e2e6449505db7 341 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 234 251 - T 22-04-2016 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 YE1705 42c2b6640fafc3ea1d9e2e6449505db7 341 PANTHER PTHR30480:SF7 4 322 9.6E-141 T 22-04-2016 YE1705 42c2b6640fafc3ea1d9e2e6449505db7 341 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 3 332 48.277 T 22-04-2016 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|UniPathway: UPA00544 YE1705 42c2b6640fafc3ea1d9e2e6449505db7 341 PANTHER PTHR30480 4 322 9.6E-141 T 22-04-2016 YE1705 42c2b6640fafc3ea1d9e2e6449505db7 341 Gene3D G3DSA:3.20.20.300 3 317 1.9E-95 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YE3576 d17dcf70055ca73350a767dbfc43b39a 494 SUPERFAMILY SSF81296 22 194 7.84E-53 T 22-04-2016 IPR014756 Immunoglobulin E-set YE3576 d17dcf70055ca73350a767dbfc43b39a 494 SUPERFAMILY SSF51055 431 494 1.57E-8 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 YE3576 d17dcf70055ca73350a767dbfc43b39a 494 Gene3D G3DSA:2.70.50.50 22 193 1.2E-55 T 22-04-2016 YE3576 d17dcf70055ca73350a767dbfc43b39a 494 Gene3D G3DSA:2.10.10.20 433 494 1.4E-8 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 YE3576 d17dcf70055ca73350a767dbfc43b39a 494 PANTHER PTHR34823 6 408 7.9E-101 T 22-04-2016 YE3576 d17dcf70055ca73350a767dbfc43b39a 494 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 22 189 2.9E-33 T 22-04-2016 IPR004302 Chitin-binding protein, N-terminal YE3576 d17dcf70055ca73350a767dbfc43b39a 494 Hamap MF_01905 GlcNAc-binding protein A [gbpA]. 1 491 51.209 T 22-04-2016 IPR020879 N-acetylglucosamine-binding protein A GO:0008061 YE3576 d17dcf70055ca73350a767dbfc43b39a 494 Pfam PF02839 Carbohydrate binding domain 435 463 4.3E-7 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 YE3576 d17dcf70055ca73350a767dbfc43b39a 494 PANTHER PTHR34823:SF1 6 408 7.9E-101 T 22-04-2016 YE2926 637df828021654f2b8fcc7820214deaa 310 Gene3D G3DSA:3.30.70.1350 222 285 9.3E-5 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain YE2926 637df828021654f2b8fcc7820214deaa 310 PANTHER PTHR11562 9 294 4.4E-114 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 YE2926 637df828021654f2b8fcc7820214deaa 310 SUPERFAMILY SSF161111 10 209 1.83E-63 T 22-04-2016 YE2926 637df828021654f2b8fcc7820214deaa 310 SUPERFAMILY SSF160240 214 287 2.62E-9 T 22-04-2016 YE2926 637df828021654f2b8fcc7820214deaa 310 Gene3D G3DSA:1.20.1510.10 13 208 3.4E-68 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain YE2926 637df828021654f2b8fcc7820214deaa 310 Pfam PF01545 Cation efflux family 16 208 6.2E-54 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 YE2926 637df828021654f2b8fcc7820214deaa 310 PANTHER PTHR11562:SF17 9 294 4.4E-114 T 22-04-2016 YE2926 637df828021654f2b8fcc7820214deaa 310 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 12 288 2.5E-97 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 YE0498 ad7d4e47dec9d1f72cdc3093a5c89b56 965 SUPERFAMILY SSF52374 378 585 1.5E-136 T 22-04-2016 YE0498 ad7d4e47dec9d1f72cdc3093a5c89b56 965 SUPERFAMILY SSF52374 14 206 1.5E-136 T 22-04-2016 YE0498 ad7d4e47dec9d1f72cdc3093a5c89b56 965 SUPERFAMILY SSF52374 623 655 1.5E-136 T 22-04-2016 YE0498 ad7d4e47dec9d1f72cdc3093a5c89b56 965 Pfam PF08264 Anticodon-binding domain of tRNA 688 839 1.4E-44 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 YE0498 ad7d4e47dec9d1f72cdc3093a5c89b56 965 Gene3D G3DSA:3.40.50.620 17 207 6.6E-141 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YE0498 ad7d4e47dec9d1f72cdc3093a5c89b56 965 Gene3D G3DSA:3.40.50.620 378 585 6.6E-141 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YE0498 ad7d4e47dec9d1f72cdc3093a5c89b56 965 Gene3D G3DSA:3.40.50.620 623 644 6.6E-141 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YE0498 ad7d4e47dec9d1f72cdc3093a5c89b56 965 PANTHER PTHR11946 622 874 0.0 T 22-04-2016 YE0498 ad7d4e47dec9d1f72cdc3093a5c89b56 965 PANTHER PTHR11946 894 956 0.0 T 22-04-2016 YE0498 ad7d4e47dec9d1f72cdc3093a5c89b56 965 PANTHER PTHR11946 6 328 0.0 T 22-04-2016 YE0498 ad7d4e47dec9d1f72cdc3093a5c89b56 965 PANTHER PTHR11946 347 584 0.0 T 22-04-2016 YE0498 ad7d4e47dec9d1f72cdc3093a5c89b56 965 Gene3D G3DSA:1.10.287.380 892 950 1.3E-7 T 22-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 YE0498 ad7d4e47dec9d1f72cdc3093a5c89b56 965 SUPERFAMILY SSF46589 898 962 3.82E-16 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 YE0498 ad7d4e47dec9d1f72cdc3093a5c89b56 965 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 900 958 9.2E-17 T 22-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 YE0498 ad7d4e47dec9d1f72cdc3093a5c89b56 965 PANTHER PTHR11946:SF5 622 874 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 YE0498 ad7d4e47dec9d1f72cdc3093a5c89b56 965 PANTHER PTHR11946:SF5 894 956 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 YE0498 ad7d4e47dec9d1f72cdc3093a5c89b56 965 PANTHER PTHR11946:SF5 6 328 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 YE0498 ad7d4e47dec9d1f72cdc3093a5c89b56 965 PANTHER PTHR11946:SF5 347 584 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 YE0498 ad7d4e47dec9d1f72cdc3093a5c89b56 965 Hamap MF_02004 Valine--tRNA ligase [valS]. 15 963 16.209 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 YE0498 ad7d4e47dec9d1f72cdc3093a5c89b56 965 Gene3D G3DSA:1.10.730.10 645 830 3.5E-66 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YE0498 ad7d4e47dec9d1f72cdc3093a5c89b56 965 Gene3D G3DSA:3.90.740.10 208 373 4.7E-48 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 YE0498 ad7d4e47dec9d1f72cdc3093a5c89b56 965 TIGRFAM TIGR00422 valS: valine--tRNA ligase 16 944 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 YE0498 ad7d4e47dec9d1f72cdc3093a5c89b56 965 SUPERFAMILY SSF47323 656 913 1.81E-73 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YE0498 ad7d4e47dec9d1f72cdc3093a5c89b56 965 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 56 67 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YE0498 ad7d4e47dec9d1f72cdc3093a5c89b56 965 SUPERFAMILY SSF50677 205 379 1.57E-56 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 YE0498 ad7d4e47dec9d1f72cdc3093a5c89b56 965 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 645 9.7E-227 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YE0498 ad7d4e47dec9d1f72cdc3093a5c89b56 965 PRINTS PR00986 Valyl-tRNA synthetase signature 483 504 2.1E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 YE0498 ad7d4e47dec9d1f72cdc3093a5c89b56 965 PRINTS PR00986 Valyl-tRNA synthetase signature 514 532 2.1E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 YE0498 ad7d4e47dec9d1f72cdc3093a5c89b56 965 PRINTS PR00986 Valyl-tRNA synthetase signature 383 396 2.1E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 YE0498 ad7d4e47dec9d1f72cdc3093a5c89b56 965 PRINTS PR00986 Valyl-tRNA synthetase signature 250 267 2.1E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 YE0498 ad7d4e47dec9d1f72cdc3093a5c89b56 965 PRINTS PR00986 Valyl-tRNA synthetase signature 49 60 2.1E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 YE0742 b380073c1ed2f3474a6a0aa33ca9b4ee 944 SUPERFAMILY SSF47384 277 357 4.9E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE0742 b380073c1ed2f3474a6a0aa33ca9b4ee 944 Pfam PF00672 HAMP domain 181 247 6.5E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YE0742 b380073c1ed2f3474a6a0aa33ca9b4ee 944 Pfam PF00072 Response regulator receiver domain 670 781 1.4E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE0742 b380073c1ed2f3474a6a0aa33ca9b4ee 944 SMART SM00388 291 356 8.3E-22 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE0742 b380073c1ed2f3474a6a0aa33ca9b4ee 944 SMART SM00387 403 519 4.6E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE0742 b380073c1ed2f3474a6a0aa33ca9b4ee 944 Pfam PF00512 His Kinase A (phospho-acceptor) domain 292 355 9.3E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE0742 b380073c1ed2f3474a6a0aa33ca9b4ee 944 PANTHER PTHR24423 193 230 1.4E-202 T 22-04-2016 YE0742 b380073c1ed2f3474a6a0aa33ca9b4ee 944 PANTHER PTHR24423 270 522 1.4E-202 T 22-04-2016 YE0742 b380073c1ed2f3474a6a0aa33ca9b4ee 944 PANTHER PTHR24423 6 20 1.4E-202 T 22-04-2016 YE0742 b380073c1ed2f3474a6a0aa33ca9b4ee 944 PANTHER PTHR24423 573 824 1.4E-202 T 22-04-2016 YE0742 b380073c1ed2f3474a6a0aa33ca9b4ee 944 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 403 518 6.1E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE0742 b380073c1ed2f3474a6a0aa33ca9b4ee 944 SUPERFAMILY SSF55874 345 516 1.7E-43 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE0742 b380073c1ed2f3474a6a0aa33ca9b4ee 944 SMART SM00073 842 934 6.8E-5 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YE0742 b380073c1ed2f3474a6a0aa33ca9b4ee 944 Pfam PF01627 Hpt domain 852 932 1.8E-11 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YE0742 b380073c1ed2f3474a6a0aa33ca9b4ee 944 Gene3D G3DSA:3.40.50.2300 667 788 1.1E-33 T 22-04-2016 YE0742 b380073c1ed2f3474a6a0aa33ca9b4ee 944 PANTHER PTHR24423:SF540 193 230 1.4E-202 T 22-04-2016 YE0742 b380073c1ed2f3474a6a0aa33ca9b4ee 944 PANTHER PTHR24423:SF540 270 522 1.4E-202 T 22-04-2016 YE0742 b380073c1ed2f3474a6a0aa33ca9b4ee 944 PANTHER PTHR24423:SF540 6 20 1.4E-202 T 22-04-2016 YE0742 b380073c1ed2f3474a6a0aa33ca9b4ee 944 PANTHER PTHR24423:SF540 573 824 1.4E-202 T 22-04-2016 YE0742 b380073c1ed2f3474a6a0aa33ca9b4ee 944 SMART SM00304 199 251 2.6E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YE0742 b380073c1ed2f3474a6a0aa33ca9b4ee 944 SMART SM00448 668 781 2.0E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE0742 b380073c1ed2f3474a6a0aa33ca9b4ee 944 SUPERFAMILY SSF52172 668 793 1.71E-33 T 22-04-2016 IPR011006 CheY-like superfamily YE0742 b380073c1ed2f3474a6a0aa33ca9b4ee 944 PRINTS PR00344 Bacterial sensor protein C-terminal signature 444 458 6.5E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE0742 b380073c1ed2f3474a6a0aa33ca9b4ee 944 PRINTS PR00344 Bacterial sensor protein C-terminal signature 503 516 6.5E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE0742 b380073c1ed2f3474a6a0aa33ca9b4ee 944 PRINTS PR00344 Bacterial sensor protein C-terminal signature 462 472 6.5E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE0742 b380073c1ed2f3474a6a0aa33ca9b4ee 944 PRINTS PR00344 Bacterial sensor protein C-terminal signature 479 497 6.5E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE0742 b380073c1ed2f3474a6a0aa33ca9b4ee 944 SUPERFAMILY SSF52172 531 651 4.05E-5 T 22-04-2016 IPR011006 CheY-like superfamily YE0742 b380073c1ed2f3474a6a0aa33ca9b4ee 944 Gene3D G3DSA:1.20.120.160 844 941 6.6E-17 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YE0742 b380073c1ed2f3474a6a0aa33ca9b4ee 944 SUPERFAMILY SSF47226 764 777 6.28E-20 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YE0742 b380073c1ed2f3474a6a0aa33ca9b4ee 944 SUPERFAMILY SSF47226 832 933 6.28E-20 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YE0742 b380073c1ed2f3474a6a0aa33ca9b4ee 944 Gene3D G3DSA:1.10.287.130 283 341 6.3E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE0742 b380073c1ed2f3474a6a0aa33ca9b4ee 944 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 31 176 1.2E-57 T 22-04-2016 IPR019247 Histidine kinase BarA, N-terminal YE0742 b380073c1ed2f3474a6a0aa33ca9b4ee 944 Gene3D G3DSA:3.30.565.10 342 517 3.5E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE0742 b380073c1ed2f3474a6a0aa33ca9b4ee 944 SUPERFAMILY SSF158472 199 248 1.57E-5 T 22-04-2016 YE3996 a8a3fadd6cb9672571281716526b19c4 87 Pfam PF07338 Protein of unknown function (DUF1471) 34 87 1.1E-20 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 YE3996 a8a3fadd6cb9672571281716526b19c4 87 PANTHER PTHR34156:SF9 2 87 5.7E-47 T 22-04-2016 YE3996 a8a3fadd6cb9672571281716526b19c4 87 SUPERFAMILY SSF159871 4 87 1.7E-24 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 YE3996 a8a3fadd6cb9672571281716526b19c4 87 Gene3D G3DSA:3.30.1660.10 18 87 6.8E-29 T 22-04-2016 IPR025543 Dodecin-like YE3996 a8a3fadd6cb9672571281716526b19c4 87 PANTHER PTHR34156 2 87 5.7E-47 T 22-04-2016 YE3850 79ac2bcefbd53f1014683df5e60a3c87 327 SUPERFAMILY SSF51735 113 275 2.23E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3850 79ac2bcefbd53f1014683df5e60a3c87 327 Gene3D G3DSA:3.90.180.10 3 146 1.3E-40 T 22-04-2016 IPR011032 GroES-like YE3850 79ac2bcefbd53f1014683df5e60a3c87 327 SUPERFAMILY SSF50129 2 145 4.09E-32 T 22-04-2016 IPR011032 GroES-like YE3850 79ac2bcefbd53f1014683df5e60a3c87 327 PANTHER PTHR11695 16 327 2.5E-129 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 YE3850 79ac2bcefbd53f1014683df5e60a3c87 327 Pfam PF00107 Zinc-binding dehydrogenase 152 257 3.6E-30 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 YE3850 79ac2bcefbd53f1014683df5e60a3c87 327 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 88 1.6E-9 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 YE3850 79ac2bcefbd53f1014683df5e60a3c87 327 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 141 162 - T 22-04-2016 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 YE3850 79ac2bcefbd53f1014683df5e60a3c87 327 Gene3D G3DSA:3.40.50.720 147 257 1.8E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3850 79ac2bcefbd53f1014683df5e60a3c87 327 PANTHER PTHR11695:SF605 16 327 2.5E-129 T 22-04-2016 YE3850 79ac2bcefbd53f1014683df5e60a3c87 327 SMART SM00829 11 325 7.4E-29 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 YE0337 fb72a97500eb1bc6471332725e8ecf96 442 Hamap MF_01583 Threonine/serine transporter TdcC [tdcC]. 1 442 51.939 T 22-04-2016 IPR023726 Threonine/serine transporter TdcC GO:0015565|GO:0015826|GO:0016021|GO:0022889|GO:0032329 YE0337 fb72a97500eb1bc6471332725e8ecf96 442 TIGRFAM TIGR00814 stp: serine transporter 16 432 1.5E-166 T 22-04-2016 IPR004694 Hydroxy amino acid transporter GO:0005215|GO:0006810|GO:0016021 YE0337 fb72a97500eb1bc6471332725e8ecf96 442 Pfam PF01490 Transmembrane amino acid transporter protein 24 440 1.2E-7 T 22-04-2016 IPR013057 Amino acid transporter, transmembrane domain YE0337 fb72a97500eb1bc6471332725e8ecf96 442 PANTHER PTHR35334 16 442 0.0 T 22-04-2016 YE0337 fb72a97500eb1bc6471332725e8ecf96 442 PANTHER PTHR35334:SF1 16 442 0.0 T 22-04-2016 YE1236A 9b7009ce8569ba3254f946272a4c8ed3 67 PANTHER PTHR10353 1 66 8.5E-26 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YE1236A 9b7009ce8569ba3254f946272a4c8ed3 67 Gene3D G3DSA:3.20.20.80 1 65 1.5E-15 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 YE1236A 9b7009ce8569ba3254f946272a4c8ed3 67 Pfam PF00232 Glycosyl hydrolase family 1 1 62 2.4E-13 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YE1236A 9b7009ce8569ba3254f946272a4c8ed3 67 SUPERFAMILY SSF51445 1 64 2.49E-17 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YE1236A 9b7009ce8569ba3254f946272a4c8ed3 67 PANTHER PTHR10353:SF35 1 66 8.5E-26 T 22-04-2016 YE3219 4970eae4eb52412e016ea370cb8f33c2 413 PANTHER PTHR30578 3 413 5.8E-266 T 22-04-2016 YE3219 4970eae4eb52412e016ea370cb8f33c2 413 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 412 36.636 T 22-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 YE3219 4970eae4eb52412e016ea370cb8f33c2 413 Pfam PF03116 NQR2, RnfD, RnfE family 43 405 1.6E-107 T 22-04-2016 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 YE3219 4970eae4eb52412e016ea370cb8f33c2 413 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 408 2.7E-193 T 22-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 YE3219 4970eae4eb52412e016ea370cb8f33c2 413 PIRSF PIRSF016055 1 413 3.9E-198 T 22-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 YE3219 4970eae4eb52412e016ea370cb8f33c2 413 PANTHER PTHR30578:SF1 3 413 5.8E-266 T 22-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 YE3731 272e3c51cd1e88f333c23de467ac78d5 241 PANTHER PTHR30400 1 241 2.2E-123 T 22-04-2016 YE3731 272e3c51cd1e88f333c23de467ac78d5 241 Hamap MF_00766 Monofunctional biosynthetic peptidoglycan transglycosylase [mtgA]. 7 232 42.999 T 22-04-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 YE3731 272e3c51cd1e88f333c23de467ac78d5 241 Gene3D G3DSA:1.10.3810.10 61 230 7.9E-61 T 22-04-2016 YE3731 272e3c51cd1e88f333c23de467ac78d5 241 Pfam PF00912 Transglycosylase 59 226 1.3E-50 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 YE3731 272e3c51cd1e88f333c23de467ac78d5 241 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 17 230 9.0E-84 T 22-04-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 YE3731 272e3c51cd1e88f333c23de467ac78d5 241 SUPERFAMILY SSF53955 52 231 1.72E-61 T 22-04-2016 IPR023346 Lysozyme-like domain YE3731 272e3c51cd1e88f333c23de467ac78d5 241 PANTHER PTHR30400:SF0 1 241 2.2E-123 T 22-04-2016 YE1424 ce9ba22cc45f23676cd7ff0ccd3ae65d 235 Pfam PF01479 S4 domain 1 46 5.8E-8 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YE1424 ce9ba22cc45f23676cd7ff0ccd3ae65d 235 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 YE1424 ce9ba22cc45f23676cd7ff0ccd3ae65d 235 PANTHER PTHR21600 1 230 4.1E-79 T 22-04-2016 YE1424 ce9ba22cc45f23676cd7ff0ccd3ae65d 235 SUPERFAMILY SSF55120 61 227 1.07E-47 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 YE1424 ce9ba22cc45f23676cd7ff0ccd3ae65d 235 SMART SM00363 1 69 1.7E-7 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YE1424 ce9ba22cc45f23676cd7ff0ccd3ae65d 235 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 223 8.4E-59 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 YE1424 ce9ba22cc45f23676cd7ff0ccd3ae65d 235 SUPERFAMILY SSF55174 1 55 2.36E-11 T 22-04-2016 YE1424 ce9ba22cc45f23676cd7ff0ccd3ae65d 235 Pfam PF00849 RNA pseudouridylate synthase 62 192 3.6E-19 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 YE1424 ce9ba22cc45f23676cd7ff0ccd3ae65d 235 PANTHER PTHR21600:SF19 1 230 4.1E-79 T 22-04-2016 YE1424 ce9ba22cc45f23676cd7ff0ccd3ae65d 235 Gene3D G3DSA:3.10.290.10 1 64 4.7E-21 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YE3811 29d68fe5269dab4b1cc48d1397350813 154 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 154 2.9E-65 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 YE3811 29d68fe5269dab4b1cc48d1397350813 154 SUPERFAMILY SSF51230 79 154 3.27E-26 T 22-04-2016 IPR011053 Single hybrid motif YE3811 29d68fe5269dab4b1cc48d1397350813 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 100 114 1.9E-18 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 YE3811 29d68fe5269dab4b1cc48d1397350813 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 83 96 1.9E-18 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 YE3811 29d68fe5269dab4b1cc48d1397350813 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 115 128 1.9E-18 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 YE3811 29d68fe5269dab4b1cc48d1397350813 154 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 110 127 - T 22-04-2016 IPR001882 Biotin-binding site YE3811 29d68fe5269dab4b1cc48d1397350813 154 PANTHER PTHR23151 1 154 2.0E-54 T 22-04-2016 YE3811 29d68fe5269dab4b1cc48d1397350813 154 Gene3D G3DSA:2.40.50.100 78 154 9.5E-33 T 22-04-2016 YE3811 29d68fe5269dab4b1cc48d1397350813 154 Pfam PF00364 Biotin-requiring enzyme 81 153 6.1E-25 T 22-04-2016 IPR000089 Biotin/lipoyl attachment YE2743 c684ad8cd0c996d5d9f8e98c84704601 453 SUPERFAMILY SSF142984 174 242 7.45E-14 T 22-04-2016 YE2743 c684ad8cd0c996d5d9f8e98c84704601 453 Pfam PF10531 SLBB domain 176 221 8.0E-11 T 22-04-2016 IPR019554 Soluble ligand binding domain YE2743 c684ad8cd0c996d5d9f8e98c84704601 453 Pfam PF13534 4Fe-4S dicluster domain 266 326 8.6E-8 T 22-04-2016 YE2743 c684ad8cd0c996d5d9f8e98c84704601 453 Pfam PF13375 RnfC Barrel sandwich hybrid domain 388 448 2.7E-17 T 22-04-2016 IPR026902 RnfC Barrel sandwich hybrid domain YE2743 c684ad8cd0c996d5d9f8e98c84704601 453 PANTHER PTHR11780 16 382 3.6E-188 T 22-04-2016 YE2743 c684ad8cd0c996d5d9f8e98c84704601 453 PANTHER PTHR11780:SF9 16 382 3.6E-188 T 22-04-2016 YE2743 c684ad8cd0c996d5d9f8e98c84704601 453 SUPERFAMILY SSF46548 216 343 4.71E-11 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 YE2743 c684ad8cd0c996d5d9f8e98c84704601 453 Gene3D G3DSA:1.10.1060.10 263 343 1.5E-8 T 22-04-2016 YE2743 c684ad8cd0c996d5d9f8e98c84704601 453 SUPERFAMILY SSF142019 13 180 6.15E-44 T 22-04-2016 YE2743 c684ad8cd0c996d5d9f8e98c84704601 453 PIRSF PIRSF036408 14 452 2.3E-182 T 22-04-2016 IPR017054 Propanediol utilization protein, PduS, predicted YE2743 c684ad8cd0c996d5d9f8e98c84704601 453 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 266 277 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YE2743 c684ad8cd0c996d5d9f8e98c84704601 453 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 23 162 1.0E-36 T 22-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain YE1753 11f80f374a6ccadcaecd084c5006b2ad 128 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 61 103 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 YE1753 11f80f374a6ccadcaecd084c5006b2ad 128 Gene3D G3DSA:1.10.10.60 61 110 3.2E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE1753 11f80f374a6ccadcaecd084c5006b2ad 128 SMART SM00342 24 107 4.2E-26 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YE1753 11f80f374a6ccadcaecd084c5006b2ad 128 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 76 91 1.4E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YE1753 11f80f374a6ccadcaecd084c5006b2ad 128 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 91 107 1.4E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YE1753 11f80f374a6ccadcaecd084c5006b2ad 128 PANTHER PTHR11019:SF84 6 115 6.5E-59 T 22-04-2016 YE1753 11f80f374a6ccadcaecd084c5006b2ad 128 Pfam PF12833 Helix-turn-helix domain 30 108 3.2E-23 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YE1753 11f80f374a6ccadcaecd084c5006b2ad 128 PANTHER PTHR11019 6 115 6.5E-59 T 22-04-2016 YE1753 11f80f374a6ccadcaecd084c5006b2ad 128 SUPERFAMILY SSF46689 60 110 5.82E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE1753 11f80f374a6ccadcaecd084c5006b2ad 128 Gene3D G3DSA:1.10.10.60 4 60 1.4E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE1753 11f80f374a6ccadcaecd084c5006b2ad 128 SUPERFAMILY SSF46689 9 58 1.43E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE3086 7629ebe558ba92e453d6a3846541c158 357 PANTHER PTHR10366 11 356 1.1E-147 T 22-04-2016 YE3086 7629ebe558ba92e453d6a3846541c158 357 PANTHER PTHR10366:SF33 11 356 1.1E-147 T 22-04-2016 YE3086 7629ebe558ba92e453d6a3846541c158 357 TIGRFAM TIGR02622 CDP_4_6_dhtase: CDP-glucose 4,6-dehydratase 6 354 1.5E-156 T 22-04-2016 IPR013445 CDP-glucose 4,6-dehydratase KEGG: 00520+4.2.1.45|MetaCyc: PWY-5833|UniPathway: UPA00055|UniPathway: UPA00281 YE3086 7629ebe558ba92e453d6a3846541c158 357 SUPERFAMILY SSF51735 5 346 9.93E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3086 7629ebe558ba92e453d6a3846541c158 357 Gene3D G3DSA:3.40.50.720 4 196 1.1E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3086 7629ebe558ba92e453d6a3846541c158 357 Pfam PF16363 GDP-mannose 4,6 dehydratase 13 324 4.5E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3086 7629ebe558ba92e453d6a3846541c158 357 Gene3D G3DSA:3.90.25.10 197 355 6.8E-47 T 22-04-2016 YE0147 1bf7e5b32addec672470cfc59147ca13 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 289 303 3.6E-7 T 22-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 YE0147 1bf7e5b32addec672470cfc59147ca13 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 341 353 3.6E-7 T 22-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 YE0147 1bf7e5b32addec672470cfc59147ca13 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 317 330 3.6E-7 T 22-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 YE0147 1bf7e5b32addec672470cfc59147ca13 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 209 224 3.6E-7 T 22-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 YE0147 1bf7e5b32addec672470cfc59147ca13 507 SMART SM00382 210 390 7.6E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain YE0147 1bf7e5b32addec672470cfc59147ca13 507 Gene3D G3DSA:3.30.230.10 6 150 1.3E-24 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YE0147 1bf7e5b32addec672470cfc59147ca13 507 Gene3D G3DSA:3.40.50.300 190 387 1.2E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0147 1bf7e5b32addec672470cfc59147ca13 507 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 493 6.9E-212 T 22-04-2016 IPR004482 Mg chelatase-related protein YE0147 1bf7e5b32addec672470cfc59147ca13 507 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 9.8E-45 T 22-04-2016 YE0147 1bf7e5b32addec672470cfc59147ca13 507 SUPERFAMILY SSF54211 9 169 6.07E-28 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YE0147 1bf7e5b32addec672470cfc59147ca13 507 PANTHER PTHR32039 1 504 2.4E-258 T 22-04-2016 YE0147 1bf7e5b32addec672470cfc59147ca13 507 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 390 7.8E-90 T 22-04-2016 IPR000523 Magnesium chelatase ChlI domain YE0147 1bf7e5b32addec672470cfc59147ca13 507 PANTHER PTHR32039:SF7 1 504 2.4E-258 T 22-04-2016 IPR004482 Mg chelatase-related protein YE0147 1bf7e5b32addec672470cfc59147ca13 507 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 401 493 1.4E-28 T 22-04-2016 IPR025158 Mg chelatase-related protein, C-terminal domain YE0147 1bf7e5b32addec672470cfc59147ca13 507 SUPERFAMILY SSF52540 456 502 7.77E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0147 1bf7e5b32addec672470cfc59147ca13 507 SUPERFAMILY SSF52540 190 418 7.77E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0365 bc0ec15dc232f22bb685f60b066e318e 325 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 2 325 56.616 T 22-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 YE0365 bc0ec15dc232f22bb685f60b066e318e 325 Pfam PF00152 tRNA synthetases class II (D, K and N) 14 321 1.7E-47 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YE0365 bc0ec15dc232f22bb685f60b066e318e 325 PANTHER PTHR22594:SF7 14 324 1.4E-159 T 22-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 YE0365 bc0ec15dc232f22bb685f60b066e318e 325 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 17 320 1.7E-130 T 22-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 YE0365 bc0ec15dc232f22bb685f60b066e318e 325 PANTHER PTHR22594 14 324 1.4E-159 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YE0365 bc0ec15dc232f22bb685f60b066e318e 325 SUPERFAMILY SSF55681 13 322 1.21E-84 T 22-04-2016 YE0365 bc0ec15dc232f22bb685f60b066e318e 325 Gene3D G3DSA:3.30.930.10 14 321 2.7E-74 T 22-04-2016 YE0365 bc0ec15dc232f22bb685f60b066e318e 325 PRINTS PR00982 Lysyl-tRNA synthetase signature 31 41 4.5E-6 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 YE0365 bc0ec15dc232f22bb685f60b066e318e 325 PRINTS PR00982 Lysyl-tRNA synthetase signature 99 116 4.5E-6 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 YE4073 b8760b66bd85cdf58552388745668d07 768 PANTHER PTHR39083 470 767 2.4E-150 T 22-04-2016 YE4073 b8760b66bd85cdf58552388745668d07 768 PANTHER PTHR39083 20 454 2.4E-150 T 22-04-2016 YE4073 b8760b66bd85cdf58552388745668d07 768 Pfam PF03170 Bacterial cellulose synthase subunit 60 668 4.8E-216 T 22-04-2016 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 UniPathway: UPA00694 YE4073 b8760b66bd85cdf58552388745668d07 768 PANTHER PTHR39083:SF1 470 767 2.4E-150 T 22-04-2016 YE4073 b8760b66bd85cdf58552388745668d07 768 PANTHER PTHR39083:SF1 20 454 2.4E-150 T 22-04-2016 YE4073 b8760b66bd85cdf58552388745668d07 768 PRINTS PR01440 Cellulose synthase subunit B signature 384 405 8.1E-32 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 YE4073 b8760b66bd85cdf58552388745668d07 768 PRINTS PR01440 Cellulose synthase subunit B signature 220 243 8.1E-32 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 YE4073 b8760b66bd85cdf58552388745668d07 768 PRINTS PR01440 Cellulose synthase subunit B signature 517 536 8.1E-32 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 YE4073 b8760b66bd85cdf58552388745668d07 768 PRINTS PR01440 Cellulose synthase subunit B signature 554 574 8.1E-32 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 YE4073 b8760b66bd85cdf58552388745668d07 768 PRINTS PR01440 Cellulose synthase subunit B signature 88 109 8.1E-32 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 YE4073 b8760b66bd85cdf58552388745668d07 768 PRINTS PR01440 Cellulose synthase subunit B signature 301 322 8.1E-32 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 YE4073 b8760b66bd85cdf58552388745668d07 768 PRINTS PR01440 Cellulose synthase subunit B signature 178 199 8.1E-32 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 YE4073 b8760b66bd85cdf58552388745668d07 768 PRINTS PR01440 Cellulose synthase subunit B signature 707 727 8.1E-32 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 YE2076 bf87bf4b283a4445d012aa7cbe8e5314 318 SUPERFAMILY SSF52402 4 153 8.2E-29 T 22-04-2016 YE2076 bf87bf4b283a4445d012aa7cbe8e5314 318 Pfam PF00582 Universal stress protein family 182 300 1.2E-11 T 22-04-2016 IPR006016 UspA GO:0006950 YE2076 bf87bf4b283a4445d012aa7cbe8e5314 318 Pfam PF00582 Universal stress protein family 4 146 1.4E-20 T 22-04-2016 IPR006016 UspA GO:0006950 YE2076 bf87bf4b283a4445d012aa7cbe8e5314 318 Gene3D G3DSA:3.40.50.620 143 304 2.8E-31 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YE2076 bf87bf4b283a4445d012aa7cbe8e5314 318 PANTHER PTHR31964:SF41 244 318 3.0E-77 T 22-04-2016 YE2076 bf87bf4b283a4445d012aa7cbe8e5314 318 PANTHER PTHR31964:SF41 1 88 3.0E-77 T 22-04-2016 YE2076 bf87bf4b283a4445d012aa7cbe8e5314 318 SUPERFAMILY SSF52402 156 306 1.0E-23 T 22-04-2016 YE2076 bf87bf4b283a4445d012aa7cbe8e5314 318 Gene3D G3DSA:3.40.50.620 1 142 1.0E-26 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YE2076 bf87bf4b283a4445d012aa7cbe8e5314 318 PANTHER PTHR31964 244 318 3.0E-77 T 22-04-2016 YE2076 bf87bf4b283a4445d012aa7cbe8e5314 318 PANTHER PTHR31964 1 88 3.0E-77 T 22-04-2016 YE2644 e58983feb1b70c3c1a3132188676b72a 279 PANTHER PTHR33376 1 275 1.0E-158 T 22-04-2016 YE2644 e58983feb1b70c3c1a3132188676b72a 279 PANTHER PTHR33376:SF6 1 275 1.0E-158 T 22-04-2016 YE2644 e58983feb1b70c3c1a3132188676b72a 279 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 3 240 2.7E-61 T 22-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 YE2644 e58983feb1b70c3c1a3132188676b72a 279 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 3 264 1.4E-69 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 YE1890 199642b9067cda08d2eef19988991060 221 PANTHER PTHR18901 1 217 6.6E-73 T 22-04-2016 YE1890 199642b9067cda08d2eef19988991060 221 Gene3D G3DSA:1.10.150.240 21 91 1.4E-32 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 YE1890 199642b9067cda08d2eef19988991060 221 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 105 170 7.2E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YE1890 199642b9067cda08d2eef19988991060 221 SUPERFAMILY SSF56784 7 216 9.98E-50 T 22-04-2016 IPR023214 HAD-like domain YE1890 199642b9067cda08d2eef19988991060 221 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 86 191 3.8E-14 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YE1890 199642b9067cda08d2eef19988991060 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 153 173 1.4E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YE1890 199642b9067cda08d2eef19988991060 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 104 117 1.4E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YE1890 199642b9067cda08d2eef19988991060 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 135 151 1.4E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YE1890 199642b9067cda08d2eef19988991060 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 1.4E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YE1890 199642b9067cda08d2eef19988991060 221 Gene3D G3DSA:3.40.50.1000 95 218 1.8E-39 T 22-04-2016 IPR023214 HAD-like domain YE1890 199642b9067cda08d2eef19988991060 221 Gene3D G3DSA:3.40.50.1000 3 20 1.8E-39 T 22-04-2016 IPR023214 HAD-like domain YE1890 199642b9067cda08d2eef19988991060 221 PANTHER PTHR18901:SF34 1 217 6.6E-73 T 22-04-2016 YE1890 199642b9067cda08d2eef19988991060 221 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 190 2.8E-28 T 22-04-2016 IPR023214 HAD-like domain YE2156 1e9c4da509d9d083b97db6d8070f6f6d 296 PANTHER PTHR21666 169 290 1.1E-41 T 22-04-2016 YE2156 1e9c4da509d9d083b97db6d8070f6f6d 296 SUPERFAMILY SSF54001 159 290 4.9E-40 T 22-04-2016 YE2156 1e9c4da509d9d083b97db6d8070f6f6d 296 Pfam PF00877 NlpC/P60 family 178 288 7.2E-31 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- YE2156 1e9c4da509d9d083b97db6d8070f6f6d 296 Gene3D G3DSA:3.90.1720.10 158 291 2.6E-45 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- YE1422 86f6f09d1b7d28159ba3ead620f90b03 95 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 8 95 2.0E-41 T 22-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 YE1422 86f6f09d1b7d28159ba3ead620f90b03 95 Pfam PF01386 Ribosomal L25p family 4 92 2.2E-22 T 22-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 YE1422 86f6f09d1b7d28159ba3ead620f90b03 95 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 2 95 26.061 T 22-04-2016 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 YE1422 86f6f09d1b7d28159ba3ead620f90b03 95 PANTHER PTHR33284 1 95 4.9E-37 T 22-04-2016 YE1422 86f6f09d1b7d28159ba3ead620f90b03 95 SUPERFAMILY SSF50715 1 95 6.28E-27 T 22-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 YE1422 86f6f09d1b7d28159ba3ead620f90b03 95 Gene3D G3DSA:2.40.240.10 1 95 4.5E-31 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 YE1312 c7e8ed3d8530c8e622b0495864c1c02b 422 TIGRFAM TIGR01499 folC: bifunctional protein FolC 32 418 6.0E-104 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 YE1312 c7e8ed3d8530c8e622b0495864c1c02b 422 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 52 75 - T 22-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 YE1312 c7e8ed3d8530c8e622b0495864c1c02b 422 Gene3D G3DSA:3.40.1190.10 10 293 1.5E-88 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YE1312 c7e8ed3d8530c8e622b0495864c1c02b 422 Gene3D G3DSA:3.90.190.20 294 420 4.5E-47 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YE1312 c7e8ed3d8530c8e622b0495864c1c02b 422 Pfam PF02875 Mur ligase family, glutamate ligase domain 293 344 3.9E-7 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YE1312 c7e8ed3d8530c8e622b0495864c1c02b 422 PANTHER PTHR11136:SF0 8 421 8.6E-140 T 22-04-2016 YE1312 c7e8ed3d8530c8e622b0495864c1c02b 422 Pfam PF08245 Mur ligase middle domain 54 194 1.1E-8 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YE1312 c7e8ed3d8530c8e622b0495864c1c02b 422 PANTHER PTHR11136 8 421 8.6E-140 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 YE1312 c7e8ed3d8530c8e622b0495864c1c02b 422 PIRSF PIRSF001563 5 422 6.7E-111 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 YE1312 c7e8ed3d8530c8e622b0495864c1c02b 422 SUPERFAMILY SSF53623 13 290 4.58E-85 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YE1312 c7e8ed3d8530c8e622b0495864c1c02b 422 SUPERFAMILY SSF53244 292 418 3.4E-34 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YE1312 c7e8ed3d8530c8e622b0495864c1c02b 422 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 22-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 YE3568 3ba1c35638d9e23de43b1cfc22b085f0 155 Gene3D G3DSA:3.30.700.10 17 80 4.0E-9 T 22-04-2016 YE3568 3ba1c35638d9e23de43b1cfc22b085f0 155 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 15 35 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site YE3568 3ba1c35638d9e23de43b1cfc22b085f0 155 Pfam PF08334 Type II secretion system (T2SS), protein G 40 145 9.4E-37 T 22-04-2016 IPR013545 Type II secretion system protein G YE3568 3ba1c35638d9e23de43b1cfc22b085f0 155 PANTHER PTHR30093:SF9 14 147 1.1E-68 T 22-04-2016 YE3568 3ba1c35638d9e23de43b1cfc22b085f0 155 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 15 146 4.8E-55 T 22-04-2016 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 YE3568 3ba1c35638d9e23de43b1cfc22b085f0 155 Pfam PF13633 Prokaryotic N-terminal methylation site 14 39 1.1E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site YE3568 3ba1c35638d9e23de43b1cfc22b085f0 155 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 14 36 1.7E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site YE3568 3ba1c35638d9e23de43b1cfc22b085f0 155 PANTHER PTHR30093 14 147 1.1E-68 T 22-04-2016 YE3568 3ba1c35638d9e23de43b1cfc22b085f0 155 SUPERFAMILY SSF54523 42 145 9.42E-39 T 22-04-2016 YE3568 3ba1c35638d9e23de43b1cfc22b085f0 155 PRINTS PR00813 Bacterial general secretion pathway protein G signature 52 70 4.8E-22 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 YE3568 3ba1c35638d9e23de43b1cfc22b085f0 155 PRINTS PR00813 Bacterial general secretion pathway protein G signature 16 41 4.8E-22 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 YE2475 8419ef7971cd58e7cc51bd34ff2644a1 388 PANTHER PTHR23501:SF4 1 383 2.9E-137 T 22-04-2016 YE2475 8419ef7971cd58e7cc51bd34ff2644a1 388 Gene3D G3DSA:1.20.1250.20 199 376 6.0E-11 T 22-04-2016 YE2475 8419ef7971cd58e7cc51bd34ff2644a1 388 SUPERFAMILY SSF103473 3 379 1.29E-54 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE2475 8419ef7971cd58e7cc51bd34ff2644a1 388 Gene3D G3DSA:1.20.1250.20 5 180 1.2E-29 T 22-04-2016 YE2475 8419ef7971cd58e7cc51bd34ff2644a1 388 Pfam PF07690 Major Facilitator Superfamily 9 310 1.5E-40 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YE2475 8419ef7971cd58e7cc51bd34ff2644a1 388 PANTHER PTHR23501 1 383 2.9E-137 T 22-04-2016 YE1579 3c70e91cd710e2d029c5097aaba589bd 590 PANTHER PTHR10046:SF49 158 551 8.0E-159 T 22-04-2016 YE1579 3c70e91cd710e2d029c5097aaba589bd 590 Pfam PF13654 AAA domain 139 328 5.2E-21 T 22-04-2016 YE1579 3c70e91cd710e2d029c5097aaba589bd 590 Gene3D G3DSA:3.30.230.10 346 546 1.9E-34 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YE1579 3c70e91cd710e2d029c5097aaba589bd 590 SUPERFAMILY SSF54211 354 545 1.21E-35 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YE1579 3c70e91cd710e2d029c5097aaba589bd 590 PANTHER PTHR10046 158 551 8.0E-159 T 22-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 YE1579 3c70e91cd710e2d029c5097aaba589bd 590 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 354 370 6.7E-11 T 22-04-2016 YE1579 3c70e91cd710e2d029c5097aaba589bd 590 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 497 515 6.7E-11 T 22-04-2016 YE1579 3c70e91cd710e2d029c5097aaba589bd 590 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 437 456 6.7E-11 T 22-04-2016 YE1579 3c70e91cd710e2d029c5097aaba589bd 590 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 467 486 6.7E-11 T 22-04-2016 YE1579 3c70e91cd710e2d029c5097aaba589bd 590 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 440 540 1.9E-10 T 22-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 YE4088 d299113cb9d260074c8ba3c6bbfc91a8 509 PANTHER PTHR24421:SF1 173 501 1.0E-44 T 22-04-2016 YE4088 d299113cb9d260074c8ba3c6bbfc91a8 509 PANTHER PTHR24421 173 501 1.0E-44 T 22-04-2016 YE4088 d299113cb9d260074c8ba3c6bbfc91a8 509 Pfam PF07730 Histidine kinase 310 374 1.7E-9 T 22-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 YE4088 d299113cb9d260074c8ba3c6bbfc91a8 509 Pfam PF05231 MASE1 8 282 7.4E-21 T 22-04-2016 IPR007895 MASE1 YE4088 d299113cb9d260074c8ba3c6bbfc91a8 509 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 416 475 9.9E-6 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE4088 d299113cb9d260074c8ba3c6bbfc91a8 509 Gene3D G3DSA:3.30.565.10 393 464 2.0E-7 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE4088 d299113cb9d260074c8ba3c6bbfc91a8 509 SUPERFAMILY SSF55874 382 500 7.6E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE4088 d299113cb9d260074c8ba3c6bbfc91a8 509 SMART SM00387 413 503 9.8E-5 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE0589 a32fefbf27378007a17c988bbb7e0db2 639 PANTHER PTHR21666:SF184 457 639 1.3E-98 T 22-04-2016 YE0589 a32fefbf27378007a17c988bbb7e0db2 639 Gene3D G3DSA:1.10.530.10 470 634 8.2E-51 T 22-04-2016 YE0589 a32fefbf27378007a17c988bbb7e0db2 639 Pfam PF14718 Soluble lytic murein transglycosylase L domain 400 466 1.4E-25 T 22-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 YE0589 a32fefbf27378007a17c988bbb7e0db2 639 SUPERFAMILY SSF48435 23 471 2.88E-137 T 22-04-2016 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 YE0589 a32fefbf27378007a17c988bbb7e0db2 639 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 495 523 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 YE0589 a32fefbf27378007a17c988bbb7e0db2 639 SUPERFAMILY SSF53955 473 635 1.63E-50 T 22-04-2016 IPR023346 Lysozyme-like domain YE0589 a32fefbf27378007a17c988bbb7e0db2 639 Pfam PF01464 Transglycosylase SLT domain 478 590 3.7E-33 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 YE0589 a32fefbf27378007a17c988bbb7e0db2 639 Gene3D G3DSA:1.10.1240.20 399 466 1.1E-29 T 22-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 YE0589 a32fefbf27378007a17c988bbb7e0db2 639 PANTHER PTHR21666 457 639 1.3E-98 T 22-04-2016 YE0589 a32fefbf27378007a17c988bbb7e0db2 639 Gene3D G3DSA:1.25.20.10 24 384 6.2E-120 T 22-04-2016 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 YE0002 5330852fe23802c941bd62133cad0f64 153 SMART SM00344 7 114 6.7E-44 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 YE0002 5330852fe23802c941bd62133cad0f64 153 Gene3D G3DSA:1.10.10.10 3 54 4.6E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0002 5330852fe23802c941bd62133cad0f64 153 SUPERFAMILY SSF54909 68 153 2.15E-19 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel YE0002 5330852fe23802c941bd62133cad0f64 153 PANTHER PTHR30154:SF2 1 153 1.5E-67 T 22-04-2016 YE0002 5330852fe23802c941bd62133cad0f64 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 34 3.4E-14 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 YE0002 5330852fe23802c941bd62133cad0f64 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 7 23 3.4E-14 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 YE0002 5330852fe23802c941bd62133cad0f64 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 53 3.4E-14 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 YE0002 5330852fe23802c941bd62133cad0f64 153 Gene3D G3DSA:3.30.70.920 60 141 2.4E-24 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain YE0002 5330852fe23802c941bd62133cad0f64 153 Pfam PF13404 AsnC-type helix-turn-helix domain 7 48 1.1E-14 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 YE0002 5330852fe23802c941bd62133cad0f64 153 ProSitePatterns PS00519 AsnC-type HTH domain signature. 25 51 - T 22-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site YE0002 5330852fe23802c941bd62133cad0f64 153 PANTHER PTHR30154 1 153 1.5E-67 T 22-04-2016 YE0002 5330852fe23802c941bd62133cad0f64 153 SUPERFAMILY SSF46785 5 67 7.93E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0002 5330852fe23802c941bd62133cad0f64 153 Pfam PF01037 Lrp/AsnC ligand binding domain 77 144 4.4E-17 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain YE3287 83265c6a862322f1c94c81dab19507b8 274 Gene3D G3DSA:2.160.10.10 89 255 2.8E-63 T 22-04-2016 YE3287 83265c6a862322f1c94c81dab19507b8 274 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 3 69 2.6E-25 T 22-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 YE3287 83265c6a862322f1c94c81dab19507b8 274 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 132 166 5.4E-4 T 22-04-2016 IPR001451 Hexapeptide repeat YE3287 83265c6a862322f1c94c81dab19507b8 274 PANTHER PTHR19136:SF52 13 273 3.9E-137 T 22-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 YE3287 83265c6a862322f1c94c81dab19507b8 274 SUPERFAMILY SSF51161 1 256 4.16E-80 T 22-04-2016 IPR011004 Trimeric LpxA-like YE3287 83265c6a862322f1c94c81dab19507b8 274 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 3 273 8.5E-161 T 22-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 YE3287 83265c6a862322f1c94c81dab19507b8 274 PANTHER PTHR19136 13 273 3.9E-137 T 22-04-2016 YE3287 83265c6a862322f1c94c81dab19507b8 274 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 YE3287 83265c6a862322f1c94c81dab19507b8 274 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 175 209 7.2E-12 T 22-04-2016 IPR001451 Hexapeptide repeat YE3287 83265c6a862322f1c94c81dab19507b8 274 Gene3D G3DSA:1.10.166.10 1 70 1.9E-32 T 22-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 YE3287 83265c6a862322f1c94c81dab19507b8 274 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 272 58.685 T 22-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 YE3360 6f9617e3d9f7dd29fcc7c43f85d600de 138 Pfam PF09391 Protein of unknown function (DUF2000) 6 138 7.4E-35 T 22-04-2016 IPR018988 Protein of unknown function DUF2000 YE3360 6f9617e3d9f7dd29fcc7c43f85d600de 138 PIRSF PIRSF033736 1 138 2.4E-25 T 22-04-2016 IPR017021 Uncharacterised conserved protein UCP033763 YE3360 6f9617e3d9f7dd29fcc7c43f85d600de 138 SUPERFAMILY SSF102462 4 138 4.76E-30 T 22-04-2016 IPR023476 Peptidyl-tRNA hydrolase II domain MetaCyc: PWY-6308 YE3360 6f9617e3d9f7dd29fcc7c43f85d600de 138 Gene3D G3DSA:3.40.1490.10 4 138 7.0E-34 T 22-04-2016 IPR023476 Peptidyl-tRNA hydrolase II domain MetaCyc: PWY-6308 YE4098 06975bdab01e8d5ce12464ca906ab2c4 397 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 9 389 2.9E-84 T 22-04-2016 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 YE4098 06975bdab01e8d5ce12464ca906ab2c4 397 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 131 139 - T 22-04-2016 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 YE4098 06975bdab01e8d5ce12464ca906ab2c4 397 PRINTS PR00714 Phosphomannose isomerase type I signature 131 154 4.43E-62 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 YE4098 06975bdab01e8d5ce12464ca906ab2c4 397 PRINTS PR00714 Phosphomannose isomerase type I signature 40 55 4.43E-62 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 YE4098 06975bdab01e8d5ce12464ca906ab2c4 397 PRINTS PR00714 Phosphomannose isomerase type I signature 88 109 4.43E-62 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 YE4098 06975bdab01e8d5ce12464ca906ab2c4 397 PRINTS PR00714 Phosphomannose isomerase type I signature 228 243 4.43E-62 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 YE4098 06975bdab01e8d5ce12464ca906ab2c4 397 PRINTS PR00714 Phosphomannose isomerase type I signature 12 30 4.43E-62 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 YE4098 06975bdab01e8d5ce12464ca906ab2c4 397 PRINTS PR00714 Phosphomannose isomerase type I signature 263 282 4.43E-62 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 YE4098 06975bdab01e8d5ce12464ca906ab2c4 397 PRINTS PR00714 Phosphomannose isomerase type I signature 244 263 4.43E-62 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 YE4098 06975bdab01e8d5ce12464ca906ab2c4 397 PRINTS PR00714 Phosphomannose isomerase type I signature 282 301 4.43E-62 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 YE4098 06975bdab01e8d5ce12464ca906ab2c4 397 PANTHER PTHR10309:SF0 5 379 3.1E-116 T 22-04-2016 YE4098 06975bdab01e8d5ce12464ca906ab2c4 397 Gene3D G3DSA:2.60.120.10 341 381 5.1E-6 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YE4098 06975bdab01e8d5ce12464ca906ab2c4 397 Gene3D G3DSA:2.60.120.10 14 145 1.8E-57 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YE4098 06975bdab01e8d5ce12464ca906ab2c4 397 Gene3D G3DSA:2.60.120.10 246 281 1.8E-57 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YE4098 06975bdab01e8d5ce12464ca906ab2c4 397 SUPERFAMILY SSF51182 8 381 3.67E-90 T 22-04-2016 IPR011051 RmlC-like cupin domain YE4098 06975bdab01e8d5ce12464ca906ab2c4 397 PIRSF PIRSF001480 7 397 7.7E-95 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 YE4098 06975bdab01e8d5ce12464ca906ab2c4 397 PANTHER PTHR10309 5 379 3.1E-116 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 YE4098 06975bdab01e8d5ce12464ca906ab2c4 397 Gene3D G3DSA:1.10.441.10 146 239 1.7E-27 T 22-04-2016 YE4098 06975bdab01e8d5ce12464ca906ab2c4 397 Gene3D G3DSA:1.10.441.10 282 306 1.7E-27 T 22-04-2016 YE4098 06975bdab01e8d5ce12464ca906ab2c4 397 Pfam PF01238 Phosphomannose isomerase type I 10 358 4.5E-77 T 22-04-2016 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 YE0448 a69559dc313041969dda209b8d6c1dac 438 Hamap MF_01845 UPF0597 protein YhaM [yhaM]. 9 433 34.307 T 22-04-2016 IPR021144 Uncharacterised protein family UPF0597 YE0448 a69559dc313041969dda209b8d6c1dac 438 Pfam PF03313 Serine dehydratase alpha chain 187 428 1.1E-45 T 22-04-2016 IPR005130 Serine dehydratase-like, alpha subunit YE0448 a69559dc313041969dda209b8d6c1dac 438 PANTHER PTHR30501 2 436 3.6E-129 T 22-04-2016 YE0448 a69559dc313041969dda209b8d6c1dac 438 PIRSF PIRSF006054 7 435 1.7E-160 T 22-04-2016 IPR021144 Uncharacterised protein family UPF0597 YE0448 a69559dc313041969dda209b8d6c1dac 438 PANTHER PTHR30501:SF2 2 436 3.6E-129 T 22-04-2016 YE0310 e6b4e345a3007e06f2ae82ab095cd1b9 437 SUPERFAMILY SSF118215 8 412 6.28E-124 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YE0310 e6b4e345a3007e06f2ae82ab095cd1b9 437 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 306 329 - T 22-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 YE0310 e6b4e345a3007e06f2ae82ab095cd1b9 437 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 43 58 - T 22-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 YE0310 e6b4e345a3007e06f2ae82ab095cd1b9 437 PANTHER PTHR11958:SF26 1 427 5.9E-247 T 22-04-2016 IPR033380 Glutamate-aspartate symport protein GltP/GltT GO:0015293|GO:0015810|GO:0015813|GO:0016021 YE0310 e6b4e345a3007e06f2ae82ab095cd1b9 437 Gene3D G3DSA:1.10.3860.10 4 416 9.4E-131 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YE0310 e6b4e345a3007e06f2ae82ab095cd1b9 437 Pfam PF00375 Sodium:dicarboxylate symporter family 8 411 4.3E-119 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YE0310 e6b4e345a3007e06f2ae82ab095cd1b9 437 PRINTS PR00173 Glutamate-aspartate symporter signature 6 26 4.651782E-53 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YE0310 e6b4e345a3007e06f2ae82ab095cd1b9 437 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 4.651782E-53 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YE0310 e6b4e345a3007e06f2ae82ab095cd1b9 437 PRINTS PR00173 Glutamate-aspartate symporter signature 155 177 4.651782E-53 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YE0310 e6b4e345a3007e06f2ae82ab095cd1b9 437 PRINTS PR00173 Glutamate-aspartate symporter signature 303 329 4.651782E-53 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YE0310 e6b4e345a3007e06f2ae82ab095cd1b9 437 PRINTS PR00173 Glutamate-aspartate symporter signature 203 222 4.651782E-53 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YE0310 e6b4e345a3007e06f2ae82ab095cd1b9 437 PRINTS PR00173 Glutamate-aspartate symporter signature 338 357 4.651782E-53 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YE0310 e6b4e345a3007e06f2ae82ab095cd1b9 437 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 4.651782E-53 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YE0310 e6b4e345a3007e06f2ae82ab095cd1b9 437 PRINTS PR00173 Glutamate-aspartate symporter signature 365 385 4.651782E-53 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YE0310 e6b4e345a3007e06f2ae82ab095cd1b9 437 PANTHER PTHR11958 1 427 5.9E-247 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YE2570 78e128c9a57d903485408e4878f26b0e 129 PANTHER PTHR26402 6 126 6.6E-42 T 22-04-2016 YE2570 78e128c9a57d903485408e4878f26b0e 129 SUPERFAMILY SSF52172 5 125 3.42E-36 T 22-04-2016 IPR011006 CheY-like superfamily YE2570 78e128c9a57d903485408e4878f26b0e 129 SMART SM00448 6 120 3.4E-35 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE2570 78e128c9a57d903485408e4878f26b0e 129 Pfam PF00072 Response regulator receiver domain 9 120 5.9E-32 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE2570 78e128c9a57d903485408e4878f26b0e 129 Gene3D G3DSA:3.40.50.2300 4 126 1.2E-38 T 22-04-2016 YE1592 e016f9d33f5b16b9e7a25873bb20e2c4 105 TIGRFAM TIGR02097 yccV: hemimethylated DNA binding domain 4 102 1.6E-32 T 22-04-2016 IPR011722 Hemimethylated DNA-binding domain GO:0003677 YE1592 e016f9d33f5b16b9e7a25873bb20e2c4 105 PANTHER PTHR31350:SF6 1 90 5.7E-38 T 22-04-2016 YE1592 e016f9d33f5b16b9e7a25873bb20e2c4 105 PANTHER PTHR31350 1 90 5.7E-38 T 22-04-2016 YE1592 e016f9d33f5b16b9e7a25873bb20e2c4 105 Hamap MF_01194 Heat shock protein HspQ [hspQ]. 1 105 37.553 T 22-04-2016 IPR022866 Heat shock protein HspQ YE1592 e016f9d33f5b16b9e7a25873bb20e2c4 105 Pfam PF08755 Hemimethylated DNA-binding protein YccV like 5 96 2.5E-19 T 22-04-2016 IPR011722 Hemimethylated DNA-binding domain GO:0003677 YE1592 e016f9d33f5b16b9e7a25873bb20e2c4 105 SUPERFAMILY SSF141255 4 96 4.58E-30 T 22-04-2016 IPR011722 Hemimethylated DNA-binding domain GO:0003677 YE1592 e016f9d33f5b16b9e7a25873bb20e2c4 105 SMART SM00992 3 102 1.6E-37 T 22-04-2016 IPR011722 Hemimethylated DNA-binding domain GO:0003677 YE0134 83bc688d66125db440e3f4fd575952ac 466 SUPERFAMILY SSF55424 345 463 4.47E-30 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 YE0134 83bc688d66125db440e3f4fd575952ac 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 3.3E-52 T 22-04-2016 YE0134 83bc688d66125db440e3f4fd575952ac 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 3.3E-52 T 22-04-2016 YE0134 83bc688d66125db440e3f4fd575952ac 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 3.3E-52 T 22-04-2016 YE0134 83bc688d66125db440e3f4fd575952ac 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 3.3E-52 T 22-04-2016 YE0134 83bc688d66125db440e3f4fd575952ac 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 3.3E-52 T 22-04-2016 YE0134 83bc688d66125db440e3f4fd575952ac 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 3.3E-52 T 22-04-2016 YE0134 83bc688d66125db440e3f4fd575952ac 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 3.3E-52 T 22-04-2016 YE0134 83bc688d66125db440e3f4fd575952ac 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 3.3E-52 T 22-04-2016 YE0134 83bc688d66125db440e3f4fd575952ac 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 3.3E-52 T 22-04-2016 YE0134 83bc688d66125db440e3f4fd575952ac 466 Gene3D G3DSA:3.50.50.60 146 334 2.1E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE0134 83bc688d66125db440e3f4fd575952ac 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 2.1E-27 T 22-04-2016 YE0134 83bc688d66125db440e3f4fd575952ac 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.1E-27 T 22-04-2016 YE0134 83bc688d66125db440e3f4fd575952ac 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 2.1E-27 T 22-04-2016 YE0134 83bc688d66125db440e3f4fd575952ac 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 2.1E-27 T 22-04-2016 YE0134 83bc688d66125db440e3f4fd575952ac 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 2.1E-27 T 22-04-2016 YE0134 83bc688d66125db440e3f4fd575952ac 466 PANTHER PTHR22912 1 461 7.0E-294 T 22-04-2016 YE0134 83bc688d66125db440e3f4fd575952ac 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 457 4.5E-30 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 YE0134 83bc688d66125db440e3f4fd575952ac 466 Gene3D G3DSA:3.30.390.30 345 460 3.6E-33 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 YE0134 83bc688d66125db440e3f4fd575952ac 466 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 2 466 66.316 T 22-04-2016 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 YE0134 83bc688d66125db440e3f4fd575952ac 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 326 1.4E-58 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE0134 83bc688d66125db440e3f4fd575952ac 466 PIRSF PIRSF000350 1 463 1.3E-71 T 22-04-2016 YE0134 83bc688d66125db440e3f4fd575952ac 466 PANTHER PTHR22912:SF93 1 461 7.0E-294 T 22-04-2016 YE0134 83bc688d66125db440e3f4fd575952ac 466 Gene3D G3DSA:3.50.50.60 6 145 9.6E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE0134 83bc688d66125db440e3f4fd575952ac 466 SUPERFAMILY SSF51905 1 322 2.5E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE1511 70dea4ed080185d72fbd21e05926fad1 299 Pfam PF03956 Membrane protein of unknown function (DUF340) 113 297 3.2E-56 T 22-04-2016 IPR005642 Lysine exporter LysO YE1511 70dea4ed080185d72fbd21e05926fad1 299 PANTHER PTHR35804 2 299 3.5E-99 T 22-04-2016 YE1511 70dea4ed080185d72fbd21e05926fad1 299 PANTHER PTHR35804:SF1 2 299 3.5E-99 T 22-04-2016 YE1511 70dea4ed080185d72fbd21e05926fad1 299 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 137 296 4.0E-73 T 22-04-2016 IPR005642 Lysine exporter LysO YE3695 56015b6e730df421b067ac2d69e003ad 412 SUPERFAMILY SSF103473 20 405 2.88E-56 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE3695 56015b6e730df421b067ac2d69e003ad 412 PANTHER PTHR23501:SF79 21 406 1.8E-130 T 22-04-2016 YE3695 56015b6e730df421b067ac2d69e003ad 412 Pfam PF07690 Major Facilitator Superfamily 30 213 2.5E-29 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YE3695 56015b6e730df421b067ac2d69e003ad 412 Pfam PF07690 Major Facilitator Superfamily 235 401 3.4E-13 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YE3695 56015b6e730df421b067ac2d69e003ad 412 Gene3D G3DSA:1.20.1250.20 234 405 1.8E-12 T 22-04-2016 YE3695 56015b6e730df421b067ac2d69e003ad 412 Gene3D G3DSA:1.20.1250.20 29 206 3.7E-26 T 22-04-2016 YE3695 56015b6e730df421b067ac2d69e003ad 412 PANTHER PTHR23501 21 406 1.8E-130 T 22-04-2016 YE2259 ef56b372b0652bd79f9b608685a79544 183 PANTHER PTHR23026 1 174 1.2E-91 T 22-04-2016 YE2259 ef56b372b0652bd79f9b608685a79544 183 PANTHER PTHR23026:SF107 1 174 1.2E-91 T 22-04-2016 YE2259 ef56b372b0652bd79f9b608685a79544 183 SUPERFAMILY SSF55469 1 182 1.28E-38 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 YE2259 ef56b372b0652bd79f9b608685a79544 183 PIRSF PIRSF000232 1 183 1.4E-62 T 22-04-2016 IPR026021 Putative NAD(P)H nitroreductase YdjA-like KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- YE2259 ef56b372b0652bd79f9b608685a79544 183 Gene3D G3DSA:3.40.109.10 1 174 1.9E-39 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 YE2259 ef56b372b0652bd79f9b608685a79544 183 Pfam PF00881 Nitroreductase family 8 161 5.9E-21 T 22-04-2016 IPR029479 Nitroreductase YE0818 30ae32597cafe6e7ad8550f049de7f60 324 Pfam PF13407 Periplasmic binding protein domain 40 292 1.4E-56 T 22-04-2016 IPR025997 Periplasmic binding protein YE0818 30ae32597cafe6e7ad8550f049de7f60 324 SUPERFAMILY SSF53822 39 316 7.07E-76 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YE0818 30ae32597cafe6e7ad8550f049de7f60 324 PANTHER PTHR32196 40 300 4.4E-82 T 22-04-2016 YE0818 30ae32597cafe6e7ad8550f049de7f60 324 Gene3D G3DSA:3.40.50.2300 155 316 1.0E-47 T 22-04-2016 YE0818 30ae32597cafe6e7ad8550f049de7f60 324 Gene3D G3DSA:3.40.50.2300 38 154 1.3E-34 T 22-04-2016 YE0818 30ae32597cafe6e7ad8550f049de7f60 324 PANTHER PTHR32196:SF9 40 300 4.4E-82 T 22-04-2016 YE1123A 82cc9fda45ad0583b2bebd3df6afefc5 141 SUPERFAMILY SSF50203 19 136 1.08E-39 T 22-04-2016 IPR008992 Enterotoxin GO:0009405 YE1123A 82cc9fda45ad0583b2bebd3df6afefc5 141 Gene3D G3DSA:2.40.50.110 19 136 9.7E-41 T 22-04-2016 YE1123A 82cc9fda45ad0583b2bebd3df6afefc5 141 Pfam PF02918 Pertussis toxin, subunit 2 and 3, C-terminal domain 28 130 2.0E-8 T 22-04-2016 IPR020063 Bordetella pertussis toxin B, subunit 2/3, C-terminal GO:0005576|GO:0009405 YE0174 7456c7d552ce333f1c5fc28a6bc5b6b1 293 PANTHER PTHR22572:SF105 2 268 3.9E-170 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 YE0174 7456c7d552ce333f1c5fc28a6bc5b6b1 293 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 2.3E-159 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 YE0174 7456c7d552ce333f1c5fc28a6bc5b6b1 293 PANTHER PTHR22572 2 268 3.9E-170 T 22-04-2016 YE0174 7456c7d552ce333f1c5fc28a6bc5b6b1 293 SUPERFAMILY SSF53448 1 286 3.15E-93 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YE0174 7456c7d552ce333f1c5fc28a6bc5b6b1 293 Pfam PF00483 Nucleotidyl transferase 2 238 1.1E-70 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 YE0174 7456c7d552ce333f1c5fc28a6bc5b6b1 293 Gene3D G3DSA:3.90.550.10 1 263 7.1E-67 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YE4163 0484dcdb424d6c7fcc02aed8f4bf4b02 157 Hamap MF_02001 Small heat shock protein IbpB [ibpB]. 1 147 47.428 T 22-04-2016 IPR022848 Small heat shock protein IbpB YE4163 0484dcdb424d6c7fcc02aed8f4bf4b02 157 PANTHER PTHR11527 1 142 6.6E-79 T 22-04-2016 IPR031107 Small heat shock protein HSP20 YE4163 0484dcdb424d6c7fcc02aed8f4bf4b02 157 PANTHER PTHR11527:SF127 1 142 6.6E-79 T 22-04-2016 YE4163 0484dcdb424d6c7fcc02aed8f4bf4b02 157 Pfam PF00011 Hsp20/alpha crystallin family 39 134 8.2E-17 T 22-04-2016 IPR002068 Alpha crystallin/Hsp20 domain YE4163 0484dcdb424d6c7fcc02aed8f4bf4b02 157 SUPERFAMILY SSF49764 30 134 9.42E-20 T 22-04-2016 IPR008978 HSP20-like chaperone YE4163 0484dcdb424d6c7fcc02aed8f4bf4b02 157 Gene3D G3DSA:2.60.40.790 21 134 5.8E-16 T 22-04-2016 IPR008978 HSP20-like chaperone YE1854 b3c76c38ede07d8a1b49bd69b7d6304c 80 ProDom PD060427 YEBV CYTOPLASMIC Y1856 ESCHERICHIA ECS2546 YPO1694 COLI STY1982 SIMILAR 3 79 4.0E-29 T 22-04-2016 IPR009950 Protein of unknown function DUF1480 YE1854 b3c76c38ede07d8a1b49bd69b7d6304c 80 Pfam PF07351 Protein of unknown function (DUF1480) 1 79 6.1E-42 T 22-04-2016 IPR009950 Protein of unknown function DUF1480 YE3818 431941da918092e537a4721ec4920cf4 519 SUPERFAMILY SSF55073 371 518 4.87E-43 T 22-04-2016 IPR029787 Nucleotide cyclase YE3818 431941da918092e537a4721ec4920cf4 519 Pfam PF00990 Diguanylate cyclase, GGDEF domain 366 515 4.8E-43 T 22-04-2016 IPR000160 GGDEF domain YE3818 431941da918092e537a4721ec4920cf4 519 SUPERFAMILY SSF103190 73 181 2.28E-9 T 22-04-2016 IPR029151 Periplasmic sensor domain-like YE3818 431941da918092e537a4721ec4920cf4 519 PANTHER PTHR10799 172 349 2.5E-26 T 22-04-2016 YE3818 431941da918092e537a4721ec4920cf4 519 PANTHER PTHR10799 1 25 2.5E-26 T 22-04-2016 YE3818 431941da918092e537a4721ec4920cf4 519 PANTHER PTHR10799 395 516 2.5E-26 T 22-04-2016 YE3818 431941da918092e537a4721ec4920cf4 519 SMART SM00267 355 519 3.3E-58 T 22-04-2016 IPR000160 GGDEF domain YE3818 431941da918092e537a4721ec4920cf4 519 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 363 518 1.9E-46 T 22-04-2016 IPR000160 GGDEF domain YE3818 431941da918092e537a4721ec4920cf4 519 Gene3D G3DSA:3.30.450.20 146 282 3.5E-14 T 22-04-2016 YE3818 431941da918092e537a4721ec4920cf4 519 SUPERFAMILY SSF103190 186 267 4.71E-11 T 22-04-2016 IPR029151 Periplasmic sensor domain-like YE3818 431941da918092e537a4721ec4920cf4 519 Pfam PF02743 Cache domain 45 267 6.3E-19 T 22-04-2016 IPR033479 Double Cache domain 1 YE3818 431941da918092e537a4721ec4920cf4 519 PANTHER PTHR10799:SF750 172 349 2.5E-26 T 22-04-2016 YE3818 431941da918092e537a4721ec4920cf4 519 PANTHER PTHR10799:SF750 1 25 2.5E-26 T 22-04-2016 YE3818 431941da918092e537a4721ec4920cf4 519 PANTHER PTHR10799:SF750 395 516 2.5E-26 T 22-04-2016 YE3818 431941da918092e537a4721ec4920cf4 519 Gene3D G3DSA:3.30.70.270 368 518 2.3E-48 T 22-04-2016 YE0318 9b759cf04ce373d5f524ecc3a9487d53 924 Pfam PF07660 Secretin and TonB N terminus short domain 57 105 1.4E-10 T 22-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 YE0318 9b759cf04ce373d5f524ecc3a9487d53 924 SUPERFAMILY SSF56935 311 628 1.37E-51 T 22-04-2016 YE0318 9b759cf04ce373d5f524ecc3a9487d53 924 SUPERFAMILY SSF56935 662 923 1.37E-51 T 22-04-2016 YE0318 9b759cf04ce373d5f524ecc3a9487d53 924 SUPERFAMILY SSF56935 116 280 1.37E-51 T 22-04-2016 YE0318 9b759cf04ce373d5f524ecc3a9487d53 924 SMART SM00965 56 106 3.0E-13 T 22-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 YE0318 9b759cf04ce373d5f524ecc3a9487d53 924 Gene3D G3DSA:2.40.170.20 303 923 6.8E-26 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YE0318 9b759cf04ce373d5f524ecc3a9487d53 924 Pfam PF07715 TonB-dependent Receptor Plug Domain 135 258 2.0E-9 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YE0318 9b759cf04ce373d5f524ecc3a9487d53 924 Gene3D G3DSA:2.170.130.10 132 260 1.0E-6 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YE2144 acfffc2fd7a643fff82437e5c7efa241 143 Hamap MF_01819 Transcriptional regulator SlyA [slyA]. 1 143 37.508 T 22-04-2016 IPR023071 Transcriptional regulator, SlyA YE2144 acfffc2fd7a643fff82437e5c7efa241 143 SMART SM00347 22 123 1.4E-26 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YE2144 acfffc2fd7a643fff82437e5c7efa241 143 Gene3D G3DSA:1.10.10.10 2 137 3.6E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2144 acfffc2fd7a643fff82437e5c7efa241 143 PANTHER PTHR33164 2 141 1.2E-24 T 22-04-2016 YE2144 acfffc2fd7a643fff82437e5c7efa241 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 47 63 2.8E-26 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YE2144 acfffc2fd7a643fff82437e5c7efa241 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 64 79 2.8E-26 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YE2144 acfffc2fd7a643fff82437e5c7efa241 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 99 2.8E-26 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YE2144 acfffc2fd7a643fff82437e5c7efa241 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 113 133 2.8E-26 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YE2144 acfffc2fd7a643fff82437e5c7efa241 143 Pfam PF01047 MarR family 29 87 5.0E-17 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YE2144 acfffc2fd7a643fff82437e5c7efa241 143 ProSitePatterns PS01117 MarR-type HTH domain signature. 62 96 - T 22-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site YE2144 acfffc2fd7a643fff82437e5c7efa241 143 PANTHER PTHR33164:SF16 2 141 1.2E-24 T 22-04-2016 YE2144 acfffc2fd7a643fff82437e5c7efa241 143 SUPERFAMILY SSF46785 4 139 1.27E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3562 46225e5f6b23ca3af017aeb249db0d69 169 Pfam PF01292 Prokaryotic cytochrome b561 5 167 9.4E-20 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 YE3562 46225e5f6b23ca3af017aeb249db0d69 169 PANTHER PTHR30529 1 167 7.7E-19 T 22-04-2016 YE3562 46225e5f6b23ca3af017aeb249db0d69 169 SUPERFAMILY SSF81342 3 167 1.1E-20 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 YE2114 e1f5d1c97795ec37c774c286d90fadc6 525 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 292 307 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YE2114 e1f5d1c97795ec37c774c286d90fadc6 525 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 230 243 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YE2114 e1f5d1c97795ec37c774c286d90fadc6 525 Pfam PF00158 Sigma-54 interaction domain 207 372 2.0E-60 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 YE2114 e1f5d1c97795ec37c774c286d90fadc6 525 SMART SM00091 80 146 6.2E-7 T 22-04-2016 IPR000014 PAS domain YE2114 e1f5d1c97795ec37c774c286d90fadc6 525 Gene3D G3DSA:1.10.10.60 457 513 2.9E-27 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE2114 e1f5d1c97795ec37c774c286d90fadc6 525 SMART SM00382 226 370 5.1E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain YE2114 e1f5d1c97795ec37c774c286d90fadc6 525 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 419 428 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site YE2114 e1f5d1c97795ec37c774c286d90fadc6 525 Gene3D G3DSA:3.30.450.20 76 179 7.7E-13 T 22-04-2016 YE2114 e1f5d1c97795ec37c774c286d90fadc6 525 SUPERFAMILY SSF52540 206 447 6.59E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2114 e1f5d1c97795ec37c774c286d90fadc6 525 Gene3D G3DSA:3.40.50.300 202 378 1.9E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2114 e1f5d1c97795ec37c774c286d90fadc6 525 PANTHER PTHR32071:SF3 5 523 9.7E-227 T 22-04-2016 YE2114 e1f5d1c97795ec37c774c286d90fadc6 525 Gene3D G3DSA:1.10.8.60 379 449 7.7E-20 T 22-04-2016 YE2114 e1f5d1c97795ec37c774c286d90fadc6 525 Gene3D G3DSA:3.30.70.260 2 68 1.4E-5 T 22-04-2016 YE2114 e1f5d1c97795ec37c774c286d90fadc6 525 Pfam PF00989 PAS fold 82 124 2.6E-6 T 22-04-2016 IPR013767 PAS fold GO:0006355 YE2114 e1f5d1c97795ec37c774c286d90fadc6 525 PANTHER PTHR32071 5 523 9.7E-227 T 22-04-2016 YE2114 e1f5d1c97795ec37c774c286d90fadc6 525 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 466 513 8.0E-28 T 22-04-2016 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 YE2114 e1f5d1c97795ec37c774c286d90fadc6 525 SUPERFAMILY SSF46689 459 513 1.43E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE2114 e1f5d1c97795ec37c774c286d90fadc6 525 SUPERFAMILY SSF55785 81 173 7.61E-10 T 22-04-2016 IPR000014 PAS domain YE1188 d22105460d839650c67be59999e26f0c 296 SUPERFAMILY SSF51569 1 292 3.24E-72 T 22-04-2016 YE1188 d22105460d839650c67be59999e26f0c 296 Pfam PF00701 Dihydrodipicolinate synthetase family 4 289 1.9E-51 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 YE1188 d22105460d839650c67be59999e26f0c 296 PIRSF PIRSF001365 1 295 5.9E-66 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 YE1188 d22105460d839650c67be59999e26f0c 296 PANTHER PTHR12128:SF30 2 296 1.0E-148 T 22-04-2016 YE1188 d22105460d839650c67be59999e26f0c 296 Gene3D G3DSA:3.20.20.70 1 292 2.1E-76 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YE1188 d22105460d839650c67be59999e26f0c 296 SMART SM01130 3 294 4.6E-69 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 YE1188 d22105460d839650c67be59999e26f0c 296 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 40 57 - T 22-04-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YE1188 d22105460d839650c67be59999e26f0c 296 PANTHER PTHR12128 2 296 1.0E-148 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 YE1188 d22105460d839650c67be59999e26f0c 296 PRINTS PR00146 Dihydrodipicolinate synthase signature 73 91 4.4E-7 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 YE1188 d22105460d839650c67be59999e26f0c 296 PRINTS PR00146 Dihydrodipicolinate synthase signature 37 58 4.4E-7 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 YE0273 8e02410d98b475e1f6538af32452f71f 177 Gene3D G3DSA:3.40.50.360 104 173 7.6E-23 T 22-04-2016 IPR029039 Flavoprotein-like domain YE0273 8e02410d98b475e1f6538af32452f71f 177 Gene3D G3DSA:3.40.50.360 2 72 7.6E-23 T 22-04-2016 IPR029039 Flavoprotein-like domain YE0273 8e02410d98b475e1f6538af32452f71f 177 PANTHER PTHR38030:SF2 1 173 1.0E-103 T 22-04-2016 YE0273 8e02410d98b475e1f6538af32452f71f 177 PANTHER PTHR38030 1 173 1.0E-103 T 22-04-2016 YE0273 8e02410d98b475e1f6538af32452f71f 177 Pfam PF12724 Flavodoxin domain 4 151 4.0E-55 T 22-04-2016 IPR026816 Flavodoxin domain YE0273 8e02410d98b475e1f6538af32452f71f 177 SUPERFAMILY SSF52218 1 156 2.16E-33 T 22-04-2016 IPR029039 Flavoprotein-like domain YE0273 8e02410d98b475e1f6538af32452f71f 177 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 22-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 YE2191 42a9747d089c22e5b83a8fab37779832 327 PANTHER PTHR10859 3 327 3.8E-160 T 22-04-2016 YE2191 42a9747d089c22e5b83a8fab37779832 327 PANTHER PTHR10859:SF49 3 327 3.8E-160 T 22-04-2016 YE2191 42a9747d089c22e5b83a8fab37779832 327 Gene3D G3DSA:3.90.550.10 8 146 2.0E-26 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YE2191 42a9747d089c22e5b83a8fab37779832 327 SUPERFAMILY SSF53448 8 230 1.97E-38 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YE2191 42a9747d089c22e5b83a8fab37779832 327 Hamap MF_01164 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [arnC]. 2 326 61.763 T 22-04-2016 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase GO:0016780 KEGG: 00520+2.4.2.53|UniPathway: UPA00030|UniPathway: UPA00036 YE2191 42a9747d089c22e5b83a8fab37779832 327 Pfam PF00535 Glycosyl transferase family 2 11 172 9.9E-32 T 22-04-2016 IPR001173 Glycosyltransferase 2-like YE2122 9c9ed1192a52a906e188999141a0197a 339 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 222 231 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site YE2122 9c9ed1192a52a906e188999141a0197a 339 SUPERFAMILY SSF52540 8 248 1.2E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2122 9c9ed1192a52a906e188999141a0197a 339 Gene3D G3DSA:3.40.50.300 4 179 7.8E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2122 9c9ed1192a52a906e188999141a0197a 339 Gene3D G3DSA:1.10.10.60 282 331 2.6E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE2122 9c9ed1192a52a906e188999141a0197a 339 PANTHER PTHR32071:SF38 1 339 2.7E-228 T 22-04-2016 YE2122 9c9ed1192a52a906e188999141a0197a 339 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 8 329 2.3E-165 T 22-04-2016 IPR014317 Transcription activator PspF YE2122 9c9ed1192a52a906e188999141a0197a 339 Gene3D G3DSA:1.10.8.60 180 250 1.1E-23 T 22-04-2016 YE2122 9c9ed1192a52a906e188999141a0197a 339 SUPERFAMILY SSF46689 222 331 6.72E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE2122 9c9ed1192a52a906e188999141a0197a 339 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 295 312 2.7E-8 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YE2122 9c9ed1192a52a906e188999141a0197a 339 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 312 332 2.7E-8 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YE2122 9c9ed1192a52a906e188999141a0197a 339 Pfam PF02954 Bacterial regulatory protein, Fis family 292 328 1.1E-7 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YE2122 9c9ed1192a52a906e188999141a0197a 339 PANTHER PTHR32071 1 339 2.7E-228 T 22-04-2016 YE2122 9c9ed1192a52a906e188999141a0197a 339 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 94 109 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YE2122 9c9ed1192a52a906e188999141a0197a 339 Pfam PF00158 Sigma-54 interaction domain 9 170 3.2E-60 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 YE2122 9c9ed1192a52a906e188999141a0197a 339 SMART SM00382 28 171 7.6E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YE3089 53df39d7c519c046c94e7a0572c8df58 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 212 2.5E-75 T 22-04-2016 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 YE3089 53df39d7c519c046c94e7a0572c8df58 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 YE3089 53df39d7c519c046c94e7a0572c8df58 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 52.57 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 YE3089 53df39d7c519c046c94e7a0572c8df58 214 Pfam PF00406 Adenylate kinase 5 185 4.3E-60 T 22-04-2016 YE3089 53df39d7c519c046c94e7a0572c8df58 214 SUPERFAMILY SSF52540 1 210 6.06E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3089 53df39d7c519c046c94e7a0572c8df58 214 Gene3D G3DSA:3.40.50.300 1 212 7.3E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3089 53df39d7c519c046c94e7a0572c8df58 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 2.4E-14 T 22-04-2016 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 YE3089 53df39d7c519c046c94e7a0572c8df58 214 PANTHER PTHR23359 1 213 4.7E-110 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 YE3089 53df39d7c519c046c94e7a0572c8df58 214 PRINTS PR00094 Adenylate kinase signature 32 46 3.1E-35 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 YE3089 53df39d7c519c046c94e7a0572c8df58 214 PRINTS PR00094 Adenylate kinase signature 156 171 3.1E-35 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 YE3089 53df39d7c519c046c94e7a0572c8df58 214 PRINTS PR00094 Adenylate kinase signature 4 17 3.1E-35 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 YE3089 53df39d7c519c046c94e7a0572c8df58 214 PRINTS PR00094 Adenylate kinase signature 81 97 3.1E-35 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 YE3089 53df39d7c519c046c94e7a0572c8df58 214 PRINTS PR00094 Adenylate kinase signature 173 187 3.1E-35 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 YE0718 26bcd4a8d3c0c42798406452a0ad62d7 126 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 123 7.0E-65 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 YE0718 26bcd4a8d3c0c42798406452a0ad62d7 126 Pfam PF02261 Aspartate decarboxylase 1 114 1.1E-47 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 YE0718 26bcd4a8d3c0c42798406452a0ad62d7 126 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 126 70.163 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 YE0718 26bcd4a8d3c0c42798406452a0ad62d7 126 Gene3D G3DSA:2.40.40.20 1 124 1.9E-54 T 22-04-2016 YE0718 26bcd4a8d3c0c42798406452a0ad62d7 126 PANTHER PTHR21012 2 126 2.4E-68 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 YE0718 26bcd4a8d3c0c42798406452a0ad62d7 126 SUPERFAMILY SSF50692 1 115 1.16E-46 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain YE0718 26bcd4a8d3c0c42798406452a0ad62d7 126 PANTHER PTHR21012:SF0 2 126 2.4E-68 T 22-04-2016 YE0718 26bcd4a8d3c0c42798406452a0ad62d7 126 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 126 1.9E-60 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 YE0718 26bcd4a8d3c0c42798406452a0ad62d7 126 PIRSF PIRSF006246 1 125 6.6E-53 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 YE2860 c6a8a1caa91c4976f2eefb1fc63ce2ea 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 27 245 7.8E-37 T 22-04-2016 YE2860 c6a8a1caa91c4976f2eefb1fc63ce2ea 248 Gene3D G3DSA:3.40.50.720 12 245 6.6E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2860 c6a8a1caa91c4976f2eefb1fc63ce2ea 248 SUPERFAMILY SSF51735 18 245 1.85E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2860 c6a8a1caa91c4976f2eefb1fc63ce2ea 248 PANTHER PTHR24322 22 140 3.3E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE2860 c6a8a1caa91c4976f2eefb1fc63ce2ea 248 PANTHER PTHR24322 156 185 3.3E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE2860 c6a8a1caa91c4976f2eefb1fc63ce2ea 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 7.3E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE2860 c6a8a1caa91c4976f2eefb1fc63ce2ea 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 7.3E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE2860 c6a8a1caa91c4976f2eefb1fc63ce2ea 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 7.3E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE2860 c6a8a1caa91c4976f2eefb1fc63ce2ea 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 19 36 7.3E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE2860 c6a8a1caa91c4976f2eefb1fc63ce2ea 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 7.3E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE2860 c6a8a1caa91c4976f2eefb1fc63ce2ea 248 PANTHER PTHR24322:SF551 22 140 3.3E-22 T 22-04-2016 YE2860 c6a8a1caa91c4976f2eefb1fc63ce2ea 248 PANTHER PTHR24322:SF551 156 185 3.3E-22 T 22-04-2016 YE4158 94a787d7bd0092505318a7b979d5ccd9 486 PANTHER PTHR23501 19 201 3.4E-50 T 22-04-2016 YE4158 94a787d7bd0092505318a7b979d5ccd9 486 PANTHER PTHR23501 238 466 3.4E-50 T 22-04-2016 YE4158 94a787d7bd0092505318a7b979d5ccd9 486 Pfam PF07690 Major Facilitator Superfamily 27 421 6.4E-31 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YE4158 94a787d7bd0092505318a7b979d5ccd9 486 Gene3D G3DSA:1.20.1250.20 23 197 6.4E-20 T 22-04-2016 YE4158 94a787d7bd0092505318a7b979d5ccd9 486 Gene3D G3DSA:1.20.1250.20 276 465 2.9E-5 T 22-04-2016 YE4158 94a787d7bd0092505318a7b979d5ccd9 486 SUPERFAMILY SSF103473 254 467 3.66E-37 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE4158 94a787d7bd0092505318a7b979d5ccd9 486 SUPERFAMILY SSF103473 12 198 3.66E-37 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE0848 5368265a2f6b0002eafbc0cca94739c1 447 PANTHER PTHR36106:SF3 1 447 1.5E-285 T 22-04-2016 YE0848 5368265a2f6b0002eafbc0cca94739c1 447 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 379 7.2E-151 T 22-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 YE0848 5368265a2f6b0002eafbc0cca94739c1 447 PANTHER PTHR36106 1 447 1.5E-285 T 22-04-2016 YE0848 5368265a2f6b0002eafbc0cca94739c1 447 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 444 2.6E-158 T 22-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 YE0848 5368265a2f6b0002eafbc0cca94739c1 447 PIRSF PIRSF004539 1 447 1.6E-184 T 22-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 YE4207 97ad3dd620de90af5bb26588051872f4 287 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 273 286 - T 22-04-2016 IPR023632 ATPase, F1 complex, gamma subunit conserved site YE4207 97ad3dd620de90af5bb26588051872f4 287 Gene3D G3DSA:1.10.287.80 202 235 6.4E-40 T 22-04-2016 YE4207 97ad3dd620de90af5bb26588051872f4 287 Gene3D G3DSA:1.10.287.80 19 60 6.4E-40 T 22-04-2016 YE4207 97ad3dd620de90af5bb26588051872f4 287 SUPERFAMILY SSF52943 2 287 2.09E-96 T 22-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain YE4207 97ad3dd620de90af5bb26588051872f4 287 Gene3D G3DSA:1.10.287.80 236 282 3.7E-30 T 22-04-2016 YE4207 97ad3dd620de90af5bb26588051872f4 287 PANTHER PTHR11693 1 287 1.5E-138 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 YE4207 97ad3dd620de90af5bb26588051872f4 287 Pfam PF00231 ATP synthase 5 286 1.4E-90 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 YE4207 97ad3dd620de90af5bb26588051872f4 287 Gene3D G3DSA:3.40.1380.10 63 191 3.5E-43 T 22-04-2016 YE4207 97ad3dd620de90af5bb26588051872f4 287 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 287 36.349 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 YE4207 97ad3dd620de90af5bb26588051872f4 287 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 3.4E-38 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 YE4207 97ad3dd620de90af5bb26588051872f4 287 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 3.4E-38 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 YE4207 97ad3dd620de90af5bb26588051872f4 287 PRINTS PR00126 ATP synthase gamma subunit signature 265 286 3.4E-38 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 YE4207 97ad3dd620de90af5bb26588051872f4 287 PRINTS PR00126 ATP synthase gamma subunit signature 234 253 3.4E-38 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 YE4207 97ad3dd620de90af5bb26588051872f4 287 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 287 2.2E-111 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 YE2896 9f92d2accb1622ed07ffb458e14e0786 151 Gene3D G3DSA:3.90.1170.40 4 151 8.7E-56 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 YE2896 9f92d2accb1622ed07ffb458e14e0786 151 PANTHER PTHR23404 1 151 3.4E-46 T 22-04-2016 YE2896 9f92d2accb1622ed07ffb458e14e0786 151 SUPERFAMILY SSF54690 6 151 6.28E-54 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 YE2896 9f92d2accb1622ed07ffb458e14e0786 151 PANTHER PTHR23404:SF2 1 151 3.4E-46 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 YE2896 9f92d2accb1622ed07ffb458e14e0786 151 Pfam PF02391 MoaE protein 14 122 9.0E-36 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 YE1389 b71f9decc80126f3b58f0877f1804c88 1803 PANTHER PTHR10795:SF416 1171 1393 3.0E-34 T 22-04-2016 YE1389 b71f9decc80126f3b58f0877f1804c88 1803 PANTHER PTHR10795:SF416 928 1062 3.0E-34 T 22-04-2016 YE1389 b71f9decc80126f3b58f0877f1804c88 1803 PANTHER PTHR10795:SF416 1081 1131 3.0E-34 T 22-04-2016 YE1389 b71f9decc80126f3b58f0877f1804c88 1803 PANTHER PTHR10795:SF416 46 137 3.0E-34 T 22-04-2016 YE1389 b71f9decc80126f3b58f0877f1804c88 1803 SUPERFAMILY SSF51120 573 762 4.83E-17 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal YE1389 b71f9decc80126f3b58f0877f1804c88 1803 SUPERFAMILY SSF52743 937 1271 3.53E-48 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 YE1389 b71f9decc80126f3b58f0877f1804c88 1803 SUPERFAMILY SSF51120 1444 1594 9.03E-15 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal YE1389 b71f9decc80126f3b58f0877f1804c88 1803 Gene3D G3DSA:2.150.10.10 575 719 1.8E-20 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal YE1389 b71f9decc80126f3b58f0877f1804c88 1803 Gene3D G3DSA:2.150.10.10 1486 1594 4.7E-16 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal YE1389 b71f9decc80126f3b58f0877f1804c88 1803 Gene3D G3DSA:3.40.50.200 928 1270 8.5E-60 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 YE1389 b71f9decc80126f3b58f0877f1804c88 1803 PANTHER PTHR10795 1171 1393 3.0E-34 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related YE1389 b71f9decc80126f3b58f0877f1804c88 1803 PANTHER PTHR10795 928 1062 3.0E-34 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related YE1389 b71f9decc80126f3b58f0877f1804c88 1803 PANTHER PTHR10795 1081 1131 3.0E-34 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related YE1389 b71f9decc80126f3b58f0877f1804c88 1803 PANTHER PTHR10795 46 137 3.0E-34 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related YE1389 b71f9decc80126f3b58f0877f1804c88 1803 Gene3D G3DSA:2.60.120.260 1300 1409 1.7E-23 T 22-04-2016 IPR008979 Galactose-binding domain-like YE1389 b71f9decc80126f3b58f0877f1804c88 1803 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 1189 1199 - T 22-04-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site YE1389 b71f9decc80126f3b58f0877f1804c88 1803 SUPERFAMILY SSF49785 1298 1411 5.53E-24 T 22-04-2016 IPR008979 Galactose-binding domain-like YE1389 b71f9decc80126f3b58f0877f1804c88 1803 Pfam PF01483 Proprotein convertase P-domain 1312 1406 2.2E-21 T 22-04-2016 IPR002884 Proprotein convertase, P GO:0004252|GO:0006508 YE1389 b71f9decc80126f3b58f0877f1804c88 1803 Pfam PF00082 Subtilase family 993 1233 1.6E-24 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 YE1389 b71f9decc80126f3b58f0877f1804c88 1803 Pfam PF08548 Peptidase M10 serralysin C terminal 1444 1690 1.0E-4 T 22-04-2016 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 YE1389 b71f9decc80126f3b58f0877f1804c88 1803 PRINTS PR00313 NodO calcium binding signature 574 585 3.3E-6 T 22-04-2016 YE1389 b71f9decc80126f3b58f0877f1804c88 1803 PRINTS PR00313 NodO calcium binding signature 690 699 3.3E-6 T 22-04-2016 YE1389 b71f9decc80126f3b58f0877f1804c88 1803 PRINTS PR00313 NodO calcium binding signature 681 689 3.3E-6 T 22-04-2016 YE1389 b71f9decc80126f3b58f0877f1804c88 1803 PRINTS PR00313 NodO calcium binding signature 653 661 3.3E-6 T 22-04-2016 YE4123 80e2892df84546bd6c469a4b7327433f 520 Gene3D G3DSA:3.30.420.40 244 482 1.4E-54 T 22-04-2016 YE4123 80e2892df84546bd6c469a4b7327433f 520 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 1 240 1.9E-82 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 YE4123 80e2892df84546bd6c469a4b7327433f 520 PANTHER PTHR10196:SF72 1 491 0.0 T 22-04-2016 YE4123 80e2892df84546bd6c469a4b7327433f 520 TIGRFAM TIGR01312 XylB: xylulokinase 3 477 4.3E-183 T 22-04-2016 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 YE4123 80e2892df84546bd6c469a4b7327433f 520 SUPERFAMILY SSF53067 242 482 1.57E-65 T 22-04-2016 YE4123 80e2892df84546bd6c469a4b7327433f 520 PIRSF PIRSF000538 1 488 1.7E-137 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 YE4123 80e2892df84546bd6c469a4b7327433f 520 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 249 435 1.1E-30 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 YE4123 80e2892df84546bd6c469a4b7327433f 520 PANTHER PTHR10196 1 491 0.0 T 22-04-2016 YE4123 80e2892df84546bd6c469a4b7327433f 520 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 126 138 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 YE4123 80e2892df84546bd6c469a4b7327433f 520 Gene3D G3DSA:3.30.420.40 1 240 2.8E-69 T 22-04-2016 YE4123 80e2892df84546bd6c469a4b7327433f 520 SUPERFAMILY SSF53067 2 242 1.4E-74 T 22-04-2016 YE2660 3c963dfd9afae4ae009efd95536b17fc 692 PANTHER PTHR30183:SF7 132 688 0.0 T 22-04-2016 YE2660 3c963dfd9afae4ae009efd95536b17fc 692 SUPERFAMILY SSF161098 140 405 5.23E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE2660 3c963dfd9afae4ae009efd95536b17fc 692 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 209 400 3.1E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE2660 3c963dfd9afae4ae009efd95536b17fc 692 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 501 677 3.1E-11 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE2660 3c963dfd9afae4ae009efd95536b17fc 692 Gene3D G3DSA:1.10.3720.10 146 404 1.5E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE2660 3c963dfd9afae4ae009efd95536b17fc 692 Gene3D G3DSA:1.10.3720.10 431 680 3.6E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE2660 3c963dfd9afae4ae009efd95536b17fc 692 SUPERFAMILY SSF161098 434 674 3.27E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE2660 3c963dfd9afae4ae009efd95536b17fc 692 PANTHER PTHR30183 132 688 0.0 T 22-04-2016 YE0177 8ab1bd47eaae14f716b00dc4165c0901 418 PANTHER PTHR30250:SF9 3 416 1.9E-177 T 22-04-2016 YE0177 8ab1bd47eaae14f716b00dc4165c0901 418 Hamap MF_02024 Lipid III flippase [wzxE]. 1 416 40.729 T 22-04-2016 IPR032896 Lipid III flippase WzxE GO:0005886|GO:0009246 UniPathway: UPA00566 YE0177 8ab1bd47eaae14f716b00dc4165c0901 418 PANTHER PTHR30250 3 416 1.9E-177 T 22-04-2016 YE0177 8ab1bd47eaae14f716b00dc4165c0901 418 Pfam PF01943 Polysaccharide biosynthesis protein 4 283 4.3E-13 T 22-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 YE0831 e603c815a874d83a94b0956973b30851 110 Pfam PF01527 Transposase 10 82 2.6E-13 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 YE0831 e603c815a874d83a94b0956973b30851 110 SUPERFAMILY SSF46689 9 101 7.7E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE0831 e603c815a874d83a94b0956973b30851 110 PANTHER PTHR33215 8 108 1.6E-32 T 22-04-2016 YE0831 e603c815a874d83a94b0956973b30851 110 Gene3D G3DSA:1.10.10.60 15 97 1.0E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE0831 e603c815a874d83a94b0956973b30851 110 PANTHER PTHR33215:SF4 8 108 1.6E-32 T 22-04-2016 YE3043 e603c815a874d83a94b0956973b30851 110 Pfam PF01527 Transposase 10 82 2.6E-13 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 YE3043 e603c815a874d83a94b0956973b30851 110 SUPERFAMILY SSF46689 9 101 7.7E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE3043 e603c815a874d83a94b0956973b30851 110 PANTHER PTHR33215 8 108 1.6E-32 T 22-04-2016 YE3043 e603c815a874d83a94b0956973b30851 110 Gene3D G3DSA:1.10.10.60 15 97 1.0E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE3043 e603c815a874d83a94b0956973b30851 110 PANTHER PTHR33215:SF4 8 108 1.6E-32 T 22-04-2016 YE2626 e603c815a874d83a94b0956973b30851 110 Pfam PF01527 Transposase 10 82 2.6E-13 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 YE2626 e603c815a874d83a94b0956973b30851 110 SUPERFAMILY SSF46689 9 101 7.7E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE2626 e603c815a874d83a94b0956973b30851 110 PANTHER PTHR33215 8 108 1.6E-32 T 22-04-2016 YE2626 e603c815a874d83a94b0956973b30851 110 Gene3D G3DSA:1.10.10.60 15 97 1.0E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE2626 e603c815a874d83a94b0956973b30851 110 PANTHER PTHR33215:SF4 8 108 1.6E-32 T 22-04-2016 YE1827 e603c815a874d83a94b0956973b30851 110 Pfam PF01527 Transposase 10 82 2.6E-13 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 YE1827 e603c815a874d83a94b0956973b30851 110 SUPERFAMILY SSF46689 9 101 7.7E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE1827 e603c815a874d83a94b0956973b30851 110 PANTHER PTHR33215 8 108 1.6E-32 T 22-04-2016 YE1827 e603c815a874d83a94b0956973b30851 110 Gene3D G3DSA:1.10.10.60 15 97 1.0E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE1827 e603c815a874d83a94b0956973b30851 110 PANTHER PTHR33215:SF4 8 108 1.6E-32 T 22-04-2016 YE3415 00db4d0027a388e942d2677cb83cdfaa 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 176 192 1.3E-29 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 YE3415 00db4d0027a388e942d2677cb83cdfaa 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 149 167 1.3E-29 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 YE3415 00db4d0027a388e942d2677cb83cdfaa 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 272 287 1.3E-29 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 YE3415 00db4d0027a388e942d2677cb83cdfaa 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 232 249 1.3E-29 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 YE3415 00db4d0027a388e942d2677cb83cdfaa 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 112 125 1.3E-29 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 YE3415 00db4d0027a388e942d2677cb83cdfaa 338 Gene3D G3DSA:3.30.360.10 164 318 9.6E-59 T 22-04-2016 YE3415 00db4d0027a388e942d2677cb83cdfaa 338 PANTHER PTHR10836:SF47 1 335 3.0E-249 T 22-04-2016 YE3415 00db4d0027a388e942d2677cb83cdfaa 338 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 160 316 2.8E-52 T 22-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 YE3415 00db4d0027a388e942d2677cb83cdfaa 338 SUPERFAMILY SSF51735 1 174 7.2E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3415 00db4d0027a388e942d2677cb83cdfaa 338 SUPERFAMILY SSF55347 155 317 6.55E-55 T 22-04-2016 YE3415 00db4d0027a388e942d2677cb83cdfaa 338 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 2 337 64.219 T 22-04-2016 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72|UniPathway: UPA00244 YE3415 00db4d0027a388e942d2677cb83cdfaa 338 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 153 160 - T 22-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 YE3415 00db4d0027a388e942d2677cb83cdfaa 338 PANTHER PTHR10836 1 335 3.0E-249 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 YE3415 00db4d0027a388e942d2677cb83cdfaa 338 PIRSF PIRSF000149 1 337 4.4E-128 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 YE3415 00db4d0027a388e942d2677cb83cdfaa 338 Gene3D G3DSA:3.40.50.720 1 163 2.3E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3415 00db4d0027a388e942d2677cb83cdfaa 338 SMART SM00846 3 155 3.8E-79 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 YE3415 00db4d0027a388e942d2677cb83cdfaa 338 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 155 4.7E-51 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 YE3415 00db4d0027a388e942d2677cb83cdfaa 338 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 4 328 5.8E-183 T 22-04-2016 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72|UniPathway: UPA00244 YE1232 08819a1f1d4020b107958019ddb15271 174 PANTHER PTHR30529 1 174 1.7E-93 T 22-04-2016 YE1232 08819a1f1d4020b107958019ddb15271 174 SUPERFAMILY SSF81342 3 174 8.63E-28 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 YE1232 08819a1f1d4020b107958019ddb15271 174 PANTHER PTHR30529:SF3 1 174 1.7E-93 T 22-04-2016 YE1232 08819a1f1d4020b107958019ddb15271 174 Pfam PF01292 Prokaryotic cytochrome b561 4 173 8.1E-21 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 YE3272 9a754179df07f13bba793833b4817b5a 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 7.2E-10 T 22-04-2016 IPR001451 Hexapeptide repeat YE3272 9a754179df07f13bba793833b4817b5a 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 17 52 4.7E-7 T 22-04-2016 IPR001451 Hexapeptide repeat YE3272 9a754179df07f13bba793833b4817b5a 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 153 181 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 YE3272 9a754179df07f13bba793833b4817b5a 262 PIRSF PIRSF000456 4 262 1.3E-106 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 YE3272 9a754179df07f13bba793833b4817b5a 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 260 1.8E-108 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 YE3272 9a754179df07f13bba793833b4817b5a 262 Gene3D G3DSA:1.20.1180.10 197 262 2.7E-27 T 22-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 YE3272 9a754179df07f13bba793833b4817b5a 262 SUPERFAMILY SSF51161 2 262 8.84E-77 T 22-04-2016 IPR011004 Trimeric LpxA-like YE3272 9a754179df07f13bba793833b4817b5a 262 Gene3D G3DSA:2.160.10.10 4 194 1.0E-47 T 22-04-2016 YE3272 9a754179df07f13bba793833b4817b5a 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 262 47.834 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 YE3272 9a754179df07f13bba793833b4817b5a 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 261 1.5E-29 T 22-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 YE3272 9a754179df07f13bba793833b4817b5a 262 PANTHER PTHR23416 1 254 3.2E-140 T 22-04-2016 YE3272 9a754179df07f13bba793833b4817b5a 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 20 48 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 YE3272 9a754179df07f13bba793833b4817b5a 262 PANTHER PTHR23416:SF8 1 254 3.2E-140 T 22-04-2016 YE3732 a40e673fce4ecaea86116119c61a8b5d 217 PANTHER PTHR10224 1 217 2.7E-123 T 22-04-2016 YE3732 a40e673fce4ecaea86116119c61a8b5d 217 SUPERFAMILY SSF52317 1 215 1.3E-59 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YE3732 a40e673fce4ecaea86116119c61a8b5d 217 PIRSF PIRSF006320 1 216 2.2E-101 T 22-04-2016 IPR026041 Enhancing lycopene biosynthesis protein 2 YE3732 a40e673fce4ecaea86116119c61a8b5d 217 Gene3D G3DSA:3.40.50.880 1 216 4.6E-99 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YE2106 d73cf2064130d9fa56c9acf9776f1683 313 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 10 271 57.355 T 22-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 YE2106 d73cf2064130d9fa56c9acf9776f1683 313 PANTHER PTHR11807:SF16 9 288 2.5E-123 T 22-04-2016 YE2106 d73cf2064130d9fa56c9acf9776f1683 313 Pfam PF01171 PP-loop family 42 201 8.0E-13 T 22-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal YE2106 d73cf2064130d9fa56c9acf9776f1683 313 SUPERFAMILY SSF52402 17 236 1.99E-54 T 22-04-2016 YE2106 d73cf2064130d9fa56c9acf9776f1683 313 PIRSF PIRSF004976 2 273 2.4E-75 T 22-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 YE2106 d73cf2064130d9fa56c9acf9776f1683 313 Gene3D G3DSA:3.40.50.620 23 206 1.8E-20 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YE2106 d73cf2064130d9fa56c9acf9776f1683 313 PANTHER PTHR11807 9 288 2.5E-123 T 22-04-2016 YE1468 6587136aef75bfd20ecc163c2db5048e 223 PANTHER PTHR30450:SF1 1 223 1.3E-121 T 22-04-2016 YE1468 6587136aef75bfd20ecc163c2db5048e 223 Gene3D G3DSA:1.10.3720.10 14 219 1.2E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE1468 6587136aef75bfd20ecc163c2db5048e 223 PANTHER PTHR30450 1 223 1.3E-121 T 22-04-2016 YE1468 6587136aef75bfd20ecc163c2db5048e 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 205 1.6E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE1468 6587136aef75bfd20ecc163c2db5048e 223 SUPERFAMILY SSF161098 14 205 4.58E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE2448 f8975da3a78eb77176076137b85b1172 269 SUPERFAMILY SSF46785 16 70 3.56E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2448 f8975da3a78eb77176076137b85b1172 269 Pfam PF00455 DeoR C terminal sensor domain 89 247 6.4E-55 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain YE2448 f8975da3a78eb77176076137b85b1172 269 PANTHER PTHR30363:SF11 12 269 6.2E-122 T 22-04-2016 YE2448 f8975da3a78eb77176076137b85b1172 269 PANTHER PTHR30363 12 269 6.2E-122 T 22-04-2016 YE2448 f8975da3a78eb77176076137b85b1172 269 Gene3D G3DSA:1.10.10.10 9 64 8.6E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2448 f8975da3a78eb77176076137b85b1172 269 Gene3D G3DSA:3.40.50.1360 91 231 2.2E-14 T 22-04-2016 YE2448 f8975da3a78eb77176076137b85b1172 269 SMART SM00420 18 70 9.9E-22 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YE2448 f8975da3a78eb77176076137b85b1172 269 Pfam PF08220 DeoR-like helix-turn-helix domain 18 72 3.8E-20 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YE2448 f8975da3a78eb77176076137b85b1172 269 SUPERFAMILY SSF100950 89 250 2.65E-33 T 22-04-2016 YE2448 f8975da3a78eb77176076137b85b1172 269 ProSitePatterns PS00894 DeoR-type HTH domain signature. 18 52 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 YE2448 f8975da3a78eb77176076137b85b1172 269 SMART SM01134 87 248 1.5E-69 T 22-04-2016 YE1972 23497702f5478560076dae60facd966f 86 Gene3D G3DSA:3.30.1660.10 18 86 1.9E-26 T 22-04-2016 IPR025543 Dodecin-like YE1972 23497702f5478560076dae60facd966f 86 PANTHER PTHR34156 2 86 2.5E-27 T 22-04-2016 YE1972 23497702f5478560076dae60facd966f 86 SUPERFAMILY SSF159871 3 86 2.22E-25 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 YE1972 23497702f5478560076dae60facd966f 86 Pfam PF07338 Protein of unknown function (DUF1471) 34 86 3.3E-19 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 YE1331 fbe7e6a1aefb3b7b92f5f04194fdee49 341 SUPERFAMILY SSF53822 70 323 6.87E-43 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YE1331 fbe7e6a1aefb3b7b92f5f04194fdee49 341 PANTHER PTHR30146 12 341 1.8E-224 T 22-04-2016 YE1331 fbe7e6a1aefb3b7b92f5f04194fdee49 341 Gene3D G3DSA:3.40.50.2300 185 341 4.6E-38 T 22-04-2016 YE1331 fbe7e6a1aefb3b7b92f5f04194fdee49 341 ProSitePatterns PS00356 LacI-type HTH domain signature. 15 33 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE1331 fbe7e6a1aefb3b7b92f5f04194fdee49 341 SMART SM00354 12 82 6.3E-29 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE1331 fbe7e6a1aefb3b7b92f5f04194fdee49 341 SUPERFAMILY SSF47413 12 70 3.56E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE1331 fbe7e6a1aefb3b7b92f5f04194fdee49 341 Gene3D G3DSA:3.40.50.2300 62 184 3.4E-28 T 22-04-2016 YE1331 fbe7e6a1aefb3b7b92f5f04194fdee49 341 Pfam PF13377 Periplasmic binding protein-like domain 180 341 1.7E-28 T 22-04-2016 YE1331 fbe7e6a1aefb3b7b92f5f04194fdee49 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 14 59 6.7E-18 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE1331 fbe7e6a1aefb3b7b92f5f04194fdee49 341 Gene3D G3DSA:1.10.260.40 11 61 8.2E-22 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE1331 fbe7e6a1aefb3b7b92f5f04194fdee49 341 PANTHER PTHR30146:SF33 12 341 1.8E-224 T 22-04-2016 YE3318 5388989962c05b1cd5064093e0537a66 290 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 285 20.466 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 YE3318 5388989962c05b1cd5064093e0537a66 290 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 1 286 2.0E-105 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 YE3318 5388989962c05b1cd5064093e0537a66 290 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 280 5.9E-80 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 YE3318 5388989962c05b1cd5064093e0537a66 290 PANTHER PTHR30589 2 288 6.8E-136 T 22-04-2016 YE3318 5388989962c05b1cd5064093e0537a66 290 PANTHER PTHR30589:SF0 2 288 6.8E-136 T 22-04-2016 YE3318 5388989962c05b1cd5064093e0537a66 290 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 YE0713 8f99cf99103219fb7aaa42e9b34899ed 178 Gene3D G3DSA:3.40.50.2020 2 173 1.6E-79 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YE0713 8f99cf99103219fb7aaa42e9b34899ed 178 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 7 173 4.3E-74 T 22-04-2016 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620|UniPathway: UPA00591 YE0713 8f99cf99103219fb7aaa42e9b34899ed 178 PANTHER PTHR22573 1 171 9.3E-83 T 22-04-2016 YE0713 8f99cf99103219fb7aaa42e9b34899ed 178 PANTHER PTHR22573:SF56 1 171 9.3E-83 T 22-04-2016 YE0713 8f99cf99103219fb7aaa42e9b34899ed 178 Pfam PF00156 Phosphoribosyl transferase domain 12 160 2.6E-25 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 YE0713 8f99cf99103219fb7aaa42e9b34899ed 178 SUPERFAMILY SSF53271 3 173 4.33E-55 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YE2977 ecd499fec1941e1a75c7fbfda952b44b 555 PANTHER PTHR11451 7 247 2.5E-239 T 22-04-2016 YE2977 ecd499fec1941e1a75c7fbfda952b44b 555 PANTHER PTHR11451 267 550 2.5E-239 T 22-04-2016 YE2977 ecd499fec1941e1a75c7fbfda952b44b 555 Gene3D G3DSA:3.90.800.10 101 209 5.5E-49 T 22-04-2016 YE2977 ecd499fec1941e1a75c7fbfda952b44b 555 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 528 2.2E-62 T 22-04-2016 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: REACT_71 YE2977 ecd499fec1941e1a75c7fbfda952b44b 555 Gene3D G3DSA:1.10.1160.10 263 338 3.3E-37 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 YE2977 ecd499fec1941e1a75c7fbfda952b44b 555 Gene3D G3DSA:3.40.50.620 212 262 4.9E-43 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YE2977 ecd499fec1941e1a75c7fbfda952b44b 555 Gene3D G3DSA:3.40.50.620 28 96 4.9E-43 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YE2977 ecd499fec1941e1a75c7fbfda952b44b 555 PANTHER PTHR11451:SF29 7 247 2.5E-239 T 22-04-2016 YE2977 ecd499fec1941e1a75c7fbfda952b44b 555 PANTHER PTHR11451:SF29 267 550 2.5E-239 T 22-04-2016 YE2977 ecd499fec1941e1a75c7fbfda952b44b 555 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 1.2E-126 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 YE2977 ecd499fec1941e1a75c7fbfda952b44b 555 Gene3D G3DSA:2.40.240.10 348 461 1.4E-48 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 YE2977 ecd499fec1941e1a75c7fbfda952b44b 555 Gene3D G3DSA:2.40.240.10 462 547 2.0E-34 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 YE2977 ecd499fec1941e1a75c7fbfda952b44b 555 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 550 2.5E-303 T 22-04-2016 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18 YE2977 ecd499fec1941e1a75c7fbfda952b44b 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 2.4E-9 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 YE2977 ecd499fec1941e1a75c7fbfda952b44b 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 2.4E-9 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 YE2977 ecd499fec1941e1a75c7fbfda952b44b 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 2.4E-9 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 YE2977 ecd499fec1941e1a75c7fbfda952b44b 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 2.4E-9 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 YE2977 ecd499fec1941e1a75c7fbfda952b44b 555 SUPERFAMILY SSF50715 340 547 2.2E-80 T 22-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 YE2977 ecd499fec1941e1a75c7fbfda952b44b 555 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YE2977 ecd499fec1941e1a75c7fbfda952b44b 555 SUPERFAMILY SSF52374 28 346 1.75E-101 T 22-04-2016 YE2977 ecd499fec1941e1a75c7fbfda952b44b 555 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 549 53.609 T 22-04-2016 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 YE2890 606b7df83d18f06036c1a2e188397ce3 235 PANTHER PTHR30328:SF8 1 230 1.8E-30 T 22-04-2016 YE2890 606b7df83d18f06036c1a2e188397ce3 235 ProSitePatterns PS01081 TetR-type HTH domain signature. 38 68 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site YE2890 606b7df83d18f06036c1a2e188397ce3 235 Gene3D G3DSA:1.10.357.10 64 234 6.4E-63 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 YE2890 606b7df83d18f06036c1a2e188397ce3 235 SUPERFAMILY SSF46689 14 92 1.08E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE2890 606b7df83d18f06036c1a2e188397ce3 235 Pfam PF09209 Domain of unknown function (DUF1956) 104 230 6.5E-33 T 22-04-2016 IPR015292 Transcription regulator YbiH, C-terminal YE2890 606b7df83d18f06036c1a2e188397ce3 235 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 39 4.4E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YE2890 606b7df83d18f06036c1a2e188397ce3 235 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 47 70 4.4E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YE2890 606b7df83d18f06036c1a2e188397ce3 235 PANTHER PTHR30328 1 230 1.8E-30 T 22-04-2016 YE2890 606b7df83d18f06036c1a2e188397ce3 235 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 72 5.5E-15 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YE2890 606b7df83d18f06036c1a2e188397ce3 235 SUPERFAMILY SSF48498 100 231 1.78E-34 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal YE2890 606b7df83d18f06036c1a2e188397ce3 235 Gene3D G3DSA:1.10.10.60 15 63 2.7E-23 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE2170 382a519aa0a8cb9aac30c3a81a4f79d5 248 PANTHER PTHR24220 3 248 1.5E-127 T 22-04-2016 YE2170 382a519aa0a8cb9aac30c3a81a4f79d5 248 PANTHER PTHR24220:SF85 3 248 1.5E-127 T 22-04-2016 YE2170 382a519aa0a8cb9aac30c3a81a4f79d5 248 Gene3D G3DSA:3.40.50.300 1 235 1.9E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2170 382a519aa0a8cb9aac30c3a81a4f79d5 248 SMART SM00382 26 223 5.3E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain YE2170 382a519aa0a8cb9aac30c3a81a4f79d5 248 Pfam PF00005 ABC transporter 17 172 4.4E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE2170 382a519aa0a8cb9aac30c3a81a4f79d5 248 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 2 244 3.3E-112 T 22-04-2016 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524|GO:0006810 YE2170 382a519aa0a8cb9aac30c3a81a4f79d5 248 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE2170 382a519aa0a8cb9aac30c3a81a4f79d5 248 SUPERFAMILY SSF52540 2 231 1.36E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0806 5947b879dcb9b07f54ab929714aba2a9 198 PANTHER PTHR31527:SF0 1 196 4.9E-48 T 22-04-2016 YE0806 5947b879dcb9b07f54ab929714aba2a9 198 Pfam PF09347 Domain of unknown function (DUF1989) 7 171 7.7E-52 T 22-04-2016 IPR018959 Domain of unknown function DUF1989 YE0806 5947b879dcb9b07f54ab929714aba2a9 198 PANTHER PTHR31527 1 196 4.9E-48 T 22-04-2016 YE3905 58c42f57a3daae6651d63045c445eb25 59 PIRSF PIRSF002211 1 59 2.9E-28 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 YE3905 58c42f57a3daae6651d63045c445eb25 59 Gene3D G3DSA:3.30.1390.20 2 59 2.4E-30 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain YE3905 58c42f57a3daae6651d63045c445eb25 59 Pfam PF00327 Ribosomal protein L30p/L7e 5 55 8.7E-20 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain YE3905 58c42f57a3daae6651d63045c445eb25 59 ProSitePatterns PS00634 Ribosomal protein L30 signature. 23 55 - T 22-04-2016 IPR018038 Ribosomal protein L30, conserved site YE3905 58c42f57a3daae6651d63045c445eb25 59 SUPERFAMILY SSF55129 3 59 1.7E-21 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain YE3905 58c42f57a3daae6651d63045c445eb25 59 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 59 22.06 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 YE3905 58c42f57a3daae6651d63045c445eb25 59 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 5 59 2.5E-26 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 YE3905 58c42f57a3daae6651d63045c445eb25 59 PANTHER PTHR15892 1 59 8.1E-29 T 22-04-2016 YE0129 24ab05982078906ca22e87e3c9dcac75 266 SUPERFAMILY SSF74653 166 262 5.1E-21 T 22-04-2016 YE0129 24ab05982078906ca22e87e3c9dcac75 266 PANTHER PTHR33446:SF2 2 266 4.1E-25 T 22-04-2016 YE0129 24ab05982078906ca22e87e3c9dcac75 266 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 183 262 1.2E-22 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 YE0129 24ab05982078906ca22e87e3c9dcac75 266 Gene3D G3DSA:3.30.1150.10 152 263 7.1E-24 T 22-04-2016 YE0129 24ab05982078906ca22e87e3c9dcac75 266 PANTHER PTHR33446 2 266 4.1E-25 T 22-04-2016 YE0129 24ab05982078906ca22e87e3c9dcac75 266 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 183 261 5.8E-18 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 YE2870 9cc8c1a04587dc4905015994bae0ad84 278 SUPERFAMILY SSF52540 36 276 2.11E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2870 9cc8c1a04587dc4905015994bae0ad84 278 PANTHER PTHR24220:SF366 39 278 1.3E-143 T 22-04-2016 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD YE2870 9cc8c1a04587dc4905015994bae0ad84 278 Pfam PF00005 ABC transporter 53 207 1.0E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE2870 9cc8c1a04587dc4905015994bae0ad84 278 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 255 277 3.7E-9 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal YE2870 9cc8c1a04587dc4905015994bae0ad84 278 Gene3D G3DSA:3.40.50.300 34 275 2.4E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2870 9cc8c1a04587dc4905015994bae0ad84 278 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 37 278 1.1E-110 T 22-04-2016 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD YE2870 9cc8c1a04587dc4905015994bae0ad84 278 PANTHER PTHR24220 39 278 1.3E-143 T 22-04-2016 YE2581 f2894a19d609e01bc53564909ad33afb 119 SUPERFAMILY SSF63592 4 101 5.23E-39 T 22-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 YE2581 f2894a19d609e01bc53564909ad33afb 119 ProDom PD015582 ACTIVATOR TRANSCRIPTIONAL TRANSCRIPTION FLAGELLUM FLHD FLAGELLAR DNA-BINDING REGULATION REGULATOR PROBABLE 12 97 2.0E-45 T 22-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 YE2581 f2894a19d609e01bc53564909ad33afb 119 Hamap MF_00725 Flagellar transcriptional regulator FlhD [flhD]. 4 107 28.706 T 22-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 YE2581 f2894a19d609e01bc53564909ad33afb 119 Pfam PF05247 Flagellar transcriptional activator (FlhD) 4 103 2.4E-40 T 22-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 YE4065 a883a9c2c8882d574c1c6e33be8e87ad 314 SUPERFAMILY SSF53613 1 308 2.18E-73 T 22-04-2016 IPR029056 Ribokinase-like YE4065 a883a9c2c8882d574c1c6e33be8e87ad 314 PANTHER PTHR10584 1 308 7.9E-185 T 22-04-2016 YE4065 a883a9c2c8882d574c1c6e33be8e87ad 314 Pfam PF00294 pfkB family carbohydrate kinase 4 308 2.4E-68 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB YE4065 a883a9c2c8882d574c1c6e33be8e87ad 314 Gene3D G3DSA:3.40.1190.20 1 305 5.5E-75 T 22-04-2016 IPR029056 Ribokinase-like YE4065 a883a9c2c8882d574c1c6e33be8e87ad 314 PANTHER PTHR10584:SF57 1 308 7.9E-185 T 22-04-2016 YE4065 a883a9c2c8882d574c1c6e33be8e87ad 314 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 262 275 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 YE1136 f356a16a000d4d0c2cef32e91bc77ea9 189 SUPERFAMILY SSF55021 7 87 5.83E-17 T 22-04-2016 YE1136 f356a16a000d4d0c2cef32e91bc77ea9 189 PIRSF PIRSF028103 5 180 9.7E-65 T 22-04-2016 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 YE1136 f356a16a000d4d0c2cef32e91bc77ea9 189 PANTHER PTHR34875:SF3 1 189 1.4E-87 T 22-04-2016 YE1136 f356a16a000d4d0c2cef32e91bc77ea9 189 PANTHER PTHR34875 1 189 1.4E-87 T 22-04-2016 YE1136 f356a16a000d4d0c2cef32e91bc77ea9 189 SUPERFAMILY SSF55021 91 179 2.12E-18 T 22-04-2016 YE1136 f356a16a000d4d0c2cef32e91bc77ea9 189 Gene3D G3DSA:3.30.70.260 6 84 1.9E-32 T 22-04-2016 YE1136 f356a16a000d4d0c2cef32e91bc77ea9 189 Pfam PF13740 ACT domain 7 82 8.0E-27 T 22-04-2016 YE1136 f356a16a000d4d0c2cef32e91bc77ea9 189 Gene3D G3DSA:3.30.70.260 91 188 6.0E-44 T 22-04-2016 YE2182 21ad0cf29a77a4994131cae84d8cdd16 277 Pfam PF01497 Periplasmic binding protein 28 253 8.6E-30 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 YE2182 21ad0cf29a77a4994131cae84d8cdd16 277 Gene3D G3DSA:3.40.50.1980 27 145 2.5E-25 T 22-04-2016 YE2182 21ad0cf29a77a4994131cae84d8cdd16 277 PANTHER PTHR30535 27 273 2.3E-78 T 22-04-2016 YE2182 21ad0cf29a77a4994131cae84d8cdd16 277 Gene3D G3DSA:3.40.50.1980 157 273 2.0E-11 T 22-04-2016 YE2182 21ad0cf29a77a4994131cae84d8cdd16 277 SUPERFAMILY SSF53807 26 270 2.2E-45 T 22-04-2016 YE2182 21ad0cf29a77a4994131cae84d8cdd16 277 PANTHER PTHR30535:SF4 27 273 2.3E-78 T 22-04-2016 YE3559 f7fca4573ac7e935d0d00c164b9649df 144 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 42 134 2.0E-5 T 22-04-2016 YE0230 98ceb1906939d29e5877bda7f5307045 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 49 65 1.3E-63 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 YE0230 98ceb1906939d29e5877bda7f5307045 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 255 273 1.3E-63 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 YE0230 98ceb1906939d29e5877bda7f5307045 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 331 346 1.3E-63 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 YE0230 98ceb1906939d29e5877bda7f5307045 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 68 86 1.3E-63 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 YE0230 98ceb1906939d29e5877bda7f5307045 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 27 43 1.3E-63 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 YE0230 98ceb1906939d29e5877bda7f5307045 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 89 99 1.3E-63 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 YE0230 98ceb1906939d29e5877bda7f5307045 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 278 291 1.3E-63 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 YE0230 98ceb1906939d29e5877bda7f5307045 371 PANTHER PTHR30483 5 361 1.3E-234 T 22-04-2016 YE0230 98ceb1906939d29e5877bda7f5307045 371 PANTHER PTHR30483:SF16 5 361 1.3E-234 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 YE0230 98ceb1906939d29e5877bda7f5307045 371 Pfam PF13458 Periplasmic binding protein 27 353 2.6E-62 T 22-04-2016 IPR028081 Leucine-binding protein domain YE0230 98ceb1906939d29e5877bda7f5307045 371 SUPERFAMILY SSF53822 25 368 6.39E-89 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YE0230 98ceb1906939d29e5877bda7f5307045 371 Gene3D G3DSA:3.40.50.2300 26 225 2.4E-65 T 22-04-2016 YE2653 f79f7d6f1ed9cd3c42f8a62677becbec 358 TIGRFAM TIGR00124 cit_ly_ligase: [citrate (pro-3S)-lyase] ligase 5 339 5.0E-155 T 22-04-2016 IPR005216 Citrate lyase ligase GO:0008771 YE2653 f79f7d6f1ed9cd3c42f8a62677becbec 358 SUPERFAMILY SSF55729 21 116 2.88E-9 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE2653 f79f7d6f1ed9cd3c42f8a62677becbec 358 Gene3D G3DSA:3.40.50.620 128 333 5.5E-36 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YE2653 f79f7d6f1ed9cd3c42f8a62677becbec 358 SMART SM00764 145 331 4.9E-123 T 22-04-2016 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 YE2653 f79f7d6f1ed9cd3c42f8a62677becbec 358 PANTHER PTHR40599 2 352 1.0E-220 T 22-04-2016 YE2653 f79f7d6f1ed9cd3c42f8a62677becbec 358 Gene3D G3DSA:3.40.630.30 8 111 5.9E-8 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE2653 f79f7d6f1ed9cd3c42f8a62677becbec 358 SUPERFAMILY SSF52374 143 333 4.74E-25 T 22-04-2016 YE2653 f79f7d6f1ed9cd3c42f8a62677becbec 358 PIRSF PIRSF005751 1 349 1.4E-133 T 22-04-2016 IPR005216 Citrate lyase ligase GO:0008771 YE2653 f79f7d6f1ed9cd3c42f8a62677becbec 358 PANTHER PTHR40599:SF2 2 352 1.0E-220 T 22-04-2016 YE2653 f79f7d6f1ed9cd3c42f8a62677becbec 358 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 145 201 9.9E-9 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 YE2653 f79f7d6f1ed9cd3c42f8a62677becbec 358 Pfam PF08218 Citrate lyase ligase C-terminal domain 145 331 2.0E-77 T 22-04-2016 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 YE2653 f79f7d6f1ed9cd3c42f8a62677becbec 358 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 111 335 7.0E-94 T 22-04-2016 YE1324 53df25c6730a68686098e9946be060ac 232 PANTHER PTHR33121:SF6 10 220 7.6E-94 T 22-04-2016 YE1324 53df25c6730a68686098e9946be060ac 232 Gene3D G3DSA:3.20.20.450 14 220 1.4E-16 T 22-04-2016 IPR001633 EAL domain YE1324 53df25c6730a68686098e9946be060ac 232 SMART SM00052 3 225 2.1E-5 T 22-04-2016 IPR001633 EAL domain YE1324 53df25c6730a68686098e9946be060ac 232 SUPERFAMILY SSF141868 13 220 4.45E-21 T 22-04-2016 IPR001633 EAL domain YE1324 53df25c6730a68686098e9946be060ac 232 Pfam PF00563 EAL domain 14 219 3.6E-16 T 22-04-2016 IPR001633 EAL domain YE1324 53df25c6730a68686098e9946be060ac 232 PANTHER PTHR33121 10 220 7.6E-94 T 22-04-2016 YE3411 db537e0c0d17cdd9ea419a90491ce02b 145 Gene3D G3DSA:1.10.530.10 12 140 7.2E-20 T 22-04-2016 YE3411 db537e0c0d17cdd9ea419a90491ce02b 145 SUPERFAMILY SSF53955 12 138 4.56E-32 T 22-04-2016 IPR023346 Lysozyme-like domain YE3411 db537e0c0d17cdd9ea419a90491ce02b 145 PANTHER PTHR21666:SF108 5 141 1.8E-15 T 22-04-2016 YE3411 db537e0c0d17cdd9ea419a90491ce02b 145 PANTHER PTHR21666 5 141 1.8E-15 T 22-04-2016 YE3411 db537e0c0d17cdd9ea419a90491ce02b 145 Pfam PF01464 Transglycosylase SLT domain 14 129 3.3E-23 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 YE2770 b960f6494db51776e73acab434e70703 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 238 5.0E-79 T 22-04-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 YE2770 b960f6494db51776e73acab434e70703 245 PANTHER PTHR21235:SF15 1 244 1.2E-114 T 22-04-2016 YE2770 b960f6494db51776e73acab434e70703 245 Gene3D G3DSA:3.20.20.70 1 243 1.4E-79 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YE2770 b960f6494db51776e73acab434e70703 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 35.267 T 22-04-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 YE2770 b960f6494db51776e73acab434e70703 245 Pfam PF00977 Histidine biosynthesis protein 1 233 3.2E-77 T 22-04-2016 IPR006062 Histidine biosynthesis GO:0000105 YE2770 b960f6494db51776e73acab434e70703 245 PANTHER PTHR21235 1 244 1.2E-114 T 22-04-2016 YE2770 b960f6494db51776e73acab434e70703 245 SUPERFAMILY SSF51366 1 242 4.17E-66 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 YE0083 32698d03b3c78484e6e90bf1536c5b65 167 PANTHER PTHR12029 1 163 2.5E-76 T 22-04-2016 YE0083 32698d03b3c78484e6e90bf1536c5b65 167 PIRSF PIRSF029256 1 164 1.2E-68 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 YE0083 32698d03b3c78484e6e90bf1536c5b65 167 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 161 33.987 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 YE0083 32698d03b3c78484e6e90bf1536c5b65 167 Pfam PF00588 SpoU rRNA Methylase family 2 152 1.1E-30 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 YE0083 32698d03b3c78484e6e90bf1536c5b65 167 SUPERFAMILY SSF75217 1 162 3.2E-41 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases YE0083 32698d03b3c78484e6e90bf1536c5b65 167 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 162 2.0E-68 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 YE0083 32698d03b3c78484e6e90bf1536c5b65 167 Gene3D G3DSA:3.40.1280.10 1 165 4.4E-71 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YE0083 32698d03b3c78484e6e90bf1536c5b65 167 PANTHER PTHR12029:SF31 1 163 2.5E-76 T 22-04-2016 YE3001 8dce2b378c60b72dd0906b6207abe68b 156 Pfam PF02590 Predicted SPOUT methyltransferase 2 154 4.9E-46 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YE3001 8dce2b378c60b72dd0906b6207abe68b 156 PIRSF PIRSF004505 1 155 2.0E-39 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YE3001 8dce2b378c60b72dd0906b6207abe68b 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 26.277 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YE3001 8dce2b378c60b72dd0906b6207abe68b 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 1 156 1.8E-81 T 22-04-2016 IPR016051 Ribosomal RNA large subunit methyltransferase H GO:0005737|GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YE3001 8dce2b378c60b72dd0906b6207abe68b 156 PANTHER PTHR33603 1 155 9.5E-70 T 22-04-2016 YE3001 8dce2b378c60b72dd0906b6207abe68b 156 PANTHER PTHR33603:SF1 1 155 9.5E-70 T 22-04-2016 YE3001 8dce2b378c60b72dd0906b6207abe68b 156 Gene3D G3DSA:3.40.1280.10 2 155 5.0E-52 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YE3001 8dce2b378c60b72dd0906b6207abe68b 156 SUPERFAMILY SSF75217 2 154 2.04E-48 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases YE2805 45c91f1d3b679c0e5254a743823e10c6 195 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YE2805 45c91f1d3b679c0e5254a743823e10c6 195 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YE2805 45c91f1d3b679c0e5254a743823e10c6 195 PANTHER PTHR10849:SF11 1 125 4.3E-55 T 22-04-2016 YE2805 45c91f1d3b679c0e5254a743823e10c6 195 Gene3D G3DSA:3.30.70.20 84 121 3.4E-5 T 22-04-2016 YE2805 45c91f1d3b679c0e5254a743823e10c6 195 Pfam PF12838 4Fe-4S dicluster domain 39 89 1.4E-12 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YE2805 45c91f1d3b679c0e5254a743823e10c6 195 Gene3D G3DSA:3.30.70.20 8 83 3.0E-19 T 22-04-2016 YE2805 45c91f1d3b679c0e5254a743823e10c6 195 PANTHER PTHR10849 1 125 4.3E-55 T 22-04-2016 YE2805 45c91f1d3b679c0e5254a743823e10c6 195 SUPERFAMILY SSF54862 18 119 6.28E-25 T 22-04-2016 YE3875 97d0937b57b275bdadf6805166f2346a 1231 SUPERFAMILY SSF56507 907 1230 1.7E-134 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 YE3875 97d0937b57b275bdadf6805166f2346a 1231 SUPERFAMILY SSF82282 12 404 3.92E-115 T 22-04-2016 IPR003726 Homocysteine-binding domain YE3875 97d0937b57b275bdadf6805166f2346a 1231 Gene3D G3DSA:3.20.20.330 6 368 2.9E-125 T 22-04-2016 IPR003726 Homocysteine-binding domain YE3875 97d0937b57b275bdadf6805166f2346a 1231 TIGRFAM TIGR02082 metH: methionine synthase 18 1196 0.0 T 22-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 YE3875 97d0937b57b275bdadf6805166f2346a 1231 SUPERFAMILY SSF47644 657 743 6.54E-28 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain YE3875 97d0937b57b275bdadf6805166f2346a 1231 Gene3D G3DSA:3.10.196.10 961 1230 2.6E-116 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 YE3875 97d0937b57b275bdadf6805166f2346a 1231 Pfam PF00809 Pterin binding enzyme 365 603 1.1E-61 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 YE3875 97d0937b57b275bdadf6805166f2346a 1231 PANTHER PTHR21091 11 403 2.5E-165 T 22-04-2016 YE3875 97d0937b57b275bdadf6805166f2346a 1231 SUPERFAMILY SSF51717 361 635 2.22E-88 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 YE3875 97d0937b57b275bdadf6805166f2346a 1231 SUPERFAMILY SSF52242 748 898 5.36E-47 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 YE3875 97d0937b57b275bdadf6805166f2346a 1231 Pfam PF02607 B12 binding domain 664 737 8.2E-24 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain YE3875 97d0937b57b275bdadf6805166f2346a 1231 SMART SM01018 661 744 8.5E-44 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain YE3875 97d0937b57b275bdadf6805166f2346a 1231 Gene3D G3DSA:3.40.50.280 749 899 3.1E-65 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 YE3875 97d0937b57b275bdadf6805166f2346a 1231 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 942 1212 3.2E-125 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 YE3875 97d0937b57b275bdadf6805166f2346a 1231 Gene3D G3DSA:3.20.20.20 369 641 3.2E-114 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 YE3875 97d0937b57b275bdadf6805166f2346a 1231 Pfam PF02574 Homocysteine S-methyltransferase 22 330 3.3E-91 T 22-04-2016 IPR003726 Homocysteine-binding domain YE3875 97d0937b57b275bdadf6805166f2346a 1231 PIRSF PIRSF000381 6 1199 0.0 T 22-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 YE3875 97d0937b57b275bdadf6805166f2346a 1231 PANTHER PTHR21091:SF97 11 403 2.5E-165 T 22-04-2016 YE3875 97d0937b57b275bdadf6805166f2346a 1231 Pfam PF02310 B12 binding domain 752 844 3.2E-19 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 YE3875 97d0937b57b275bdadf6805166f2346a 1231 Gene3D G3DSA:1.10.1240.10 654 741 5.2E-39 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain YE2564 ab603f34d7063b515b5fdfd52c7da140 835 SUPERFAMILY SSF49373 450 541 6.44E-38 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YE2564 ab603f34d7063b515b5fdfd52c7da140 835 SMART SM00634 450 539 1.6E-16 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YE2564 ab603f34d7063b515b5fdfd52c7da140 835 PRINTS PR01369 Intimin signature 178 193 2.3E-11 T 22-04-2016 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 YE2564 ab603f34d7063b515b5fdfd52c7da140 835 PRINTS PR01369 Intimin signature 362 374 2.3E-11 T 22-04-2016 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 YE2564 ab603f34d7063b515b5fdfd52c7da140 835 PRINTS PR01369 Intimin signature 274 293 2.3E-11 T 22-04-2016 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 YE2564 ab603f34d7063b515b5fdfd52c7da140 835 PRINTS PR01369 Intimin signature 206 225 2.3E-11 T 22-04-2016 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 YE2564 ab603f34d7063b515b5fdfd52c7da140 835 SUPERFAMILY SSF49373 645 734 3.88E-28 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YE2564 ab603f34d7063b515b5fdfd52c7da140 835 SUPERFAMILY SSF56436 736 835 9.23E-52 T 22-04-2016 IPR016187 C-type lectin fold YE2564 ab603f34d7063b515b5fdfd52c7da140 835 PANTHER PTHR39576 64 566 5.0E-140 T 22-04-2016 YE2564 ab603f34d7063b515b5fdfd52c7da140 835 Pfam PF07979 Intimin C-type lectin domain 735 833 1.2E-20 T 22-04-2016 IPR013117 Intimin, C-terminal YE2564 ab603f34d7063b515b5fdfd52c7da140 835 Gene3D G3DSA:2.60.40.1080 645 734 6.1E-29 T 22-04-2016 YE2564 ab603f34d7063b515b5fdfd52c7da140 835 Pfam PF11924 Invasin beta-domain of outer membrane 64 325 3.5E-101 T 22-04-2016 IPR024519 Invasin beta-domain of outer membrane YE2564 ab603f34d7063b515b5fdfd52c7da140 835 SUPERFAMILY SSF49373 548 640 1.36E-16 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YE2564 ab603f34d7063b515b5fdfd52c7da140 835 PANTHER PTHR39576:SF2 64 566 5.0E-140 T 22-04-2016 YE2564 ab603f34d7063b515b5fdfd52c7da140 835 Pfam PF09134 Invasin, domain 3 545 641 2.3E-20 T 22-04-2016 IPR015217 Invasin, domain 3 YE2564 ab603f34d7063b515b5fdfd52c7da140 835 Gene3D G3DSA:2.60.40.920 455 540 1.3E-12 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YE2564 ab603f34d7063b515b5fdfd52c7da140 835 Gene3D G3DSA:3.10.100.10 737 833 1.1E-21 T 22-04-2016 IPR016186 C-type lectin-like YE2564 ab603f34d7063b515b5fdfd52c7da140 835 Gene3D G3DSA:2.60.40.920 545 635 5.0E-15 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YE2527 0d3b28cc6a17f6c5a1a3158fa66205ef 289 Gene3D G3DSA:1.10.10.60 218 272 1.2E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE2527 0d3b28cc6a17f6c5a1a3158fa66205ef 289 SMART SM00342 183 265 1.1E-18 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YE2527 0d3b28cc6a17f6c5a1a3158fa66205ef 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 234 249 4.5E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YE2527 0d3b28cc6a17f6c5a1a3158fa66205ef 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 249 265 4.5E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YE2527 0d3b28cc6a17f6c5a1a3158fa66205ef 289 SUPERFAMILY SSF46689 218 270 2.51E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE2527 0d3b28cc6a17f6c5a1a3158fa66205ef 289 PANTHER PTHR11019 28 273 1.1E-113 T 22-04-2016 YE2527 0d3b28cc6a17f6c5a1a3158fa66205ef 289 PANTHER PTHR11019:SF119 28 273 1.1E-113 T 22-04-2016 YE2527 0d3b28cc6a17f6c5a1a3158fa66205ef 289 Pfam PF12833 Helix-turn-helix domain 190 265 4.5E-12 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YE3868 54ba008fb34d2953e47b24de5108f22e 296 PANTHER PTHR32243 3 296 1.3E-144 T 22-04-2016 YE3868 54ba008fb34d2953e47b24de5108f22e 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 106 286 5.0E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE3868 54ba008fb34d2953e47b24de5108f22e 296 PANTHER PTHR32243:SF4 3 296 1.3E-144 T 22-04-2016 YE3868 54ba008fb34d2953e47b24de5108f22e 296 SUPERFAMILY SSF161098 8 296 5.23E-69 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE3868 54ba008fb34d2953e47b24de5108f22e 296 Gene3D G3DSA:1.10.3720.10 5 283 5.1E-62 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE1775 558caa7f2c2fb82a0135e1bd0e111939 287 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 16 285 3.5E-111 T 22-04-2016 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 YE1775 558caa7f2c2fb82a0135e1bd0e111939 287 PANTHER PTHR32502 1 286 4.3E-181 T 22-04-2016 YE1775 558caa7f2c2fb82a0135e1bd0e111939 287 PANTHER PTHR32502:SF5 1 286 4.3E-181 T 22-04-2016 YE1775 558caa7f2c2fb82a0135e1bd0e111939 287 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 15 285 7.6E-142 T 22-04-2016 IPR018405 Phosphotransferase system, mannose/fructose/sorbose family IID component, subgroup GO:0009401|GO:0016021 YE1583 acf7831d17b8ec0cce69a494314cc9db 211 Gene3D G3DSA:3.30.1460.30 5 107 4.5E-34 T 22-04-2016 IPR007076 TfoX, N-terminal YE1583 acf7831d17b8ec0cce69a494314cc9db 211 Pfam PF04993 TfoX N-terminal domain 17 105 1.5E-25 T 22-04-2016 IPR007076 TfoX, N-terminal YE1583 acf7831d17b8ec0cce69a494314cc9db 211 SUPERFAMILY SSF159894 15 106 1.07E-27 T 22-04-2016 YE1583 acf7831d17b8ec0cce69a494314cc9db 211 PANTHER PTHR36121 2 211 3.5E-50 T 22-04-2016 YE1583 acf7831d17b8ec0cce69a494314cc9db 211 PANTHER PTHR36121:SF1 2 211 3.5E-50 T 22-04-2016 YE1583 acf7831d17b8ec0cce69a494314cc9db 211 Gene3D G3DSA:1.10.150.20 119 201 3.5E-27 T 22-04-2016 YE1583 acf7831d17b8ec0cce69a494314cc9db 211 PIRSF PIRSF028788 1 209 1.3E-62 T 22-04-2016 IPR026256 Transcriptional regulator, TfoX/Sxy-type YE1583 acf7831d17b8ec0cce69a494314cc9db 211 Pfam PF04994 TfoX C-terminal domain 119 196 2.2E-23 T 22-04-2016 IPR007077 TfoX, C-terminal YE2071 c60520d4a8acf5654c48dba9a171376a 172 Pfam PF04463 Protein of unknown function (DUF523) 8 151 9.5E-44 T 22-04-2016 IPR007553 Domain of unknown function DUF523 YE2071 c60520d4a8acf5654c48dba9a171376a 172 PANTHER PTHR30087 1 163 3.0E-56 T 22-04-2016 YE2071 c60520d4a8acf5654c48dba9a171376a 172 PANTHER PTHR30087:SF1 1 163 3.0E-56 T 22-04-2016 YE3656 f20e5800cb9daabb1027b6408dcee35f 758 SUPERFAMILY SSF56719 32 483 2.88E-153 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 YE3656 f20e5800cb9daabb1027b6408dcee35f 758 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 5 743 34.027 T 22-04-2016 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YE3656 f20e5800cb9daabb1027b6408dcee35f 758 Gene3D G3DSA:3.30.1360.40 239 332 3.5E-24 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain YE3656 f20e5800cb9daabb1027b6408dcee35f 758 Gene3D G3DSA:2.120.10.90 497 708 4.0E-25 T 22-04-2016 YE3656 f20e5800cb9daabb1027b6408dcee35f 758 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 597 633 1.8E-4 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 YE3656 f20e5800cb9daabb1027b6408dcee35f 758 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 645 696 4.6E-8 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 YE3656 f20e5800cb9daabb1027b6408dcee35f 758 SMART SM00434 12 462 3.6E-237 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 YE3656 f20e5800cb9daabb1027b6408dcee35f 758 PANTHER PTHR10169 5 523 0.0 T 22-04-2016 YE3656 f20e5800cb9daabb1027b6408dcee35f 758 Gene3D G3DSA:3.90.199.10 334 398 2.4E-105 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 YE3656 f20e5800cb9daabb1027b6408dcee35f 758 Gene3D G3DSA:3.90.199.10 31 238 2.4E-105 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 YE3656 f20e5800cb9daabb1027b6408dcee35f 758 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 33 468 6.9E-134 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 YE3656 f20e5800cb9daabb1027b6408dcee35f 758 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 9 742 0.0 T 22-04-2016 YE3656 f20e5800cb9daabb1027b6408dcee35f 758 SUPERFAMILY SSF101904 498 741 1.7E-51 T 22-04-2016 YE3656 f20e5800cb9daabb1027b6408dcee35f 758 PANTHER PTHR10169:SF30 5 523 0.0 T 22-04-2016 YE3588 ff57e267d185c4b98b9bdbff88fbb684 467 SUPERFAMILY SSF103473 21 461 4.84E-65 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE3588 ff57e267d185c4b98b9bdbff88fbb684 467 Pfam PF00083 Sugar (and other) transporter 79 461 7.6E-29 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 YE3588 ff57e267d185c4b98b9bdbff88fbb684 467 PANTHER PTHR23508 15 466 3.1E-121 T 22-04-2016 YE3588 ff57e267d185c4b98b9bdbff88fbb684 467 PANTHER PTHR23508:SF6 15 466 3.1E-121 T 22-04-2016 YE3588 ff57e267d185c4b98b9bdbff88fbb684 467 Gene3D G3DSA:1.20.1250.20 33 240 6.9E-24 T 22-04-2016 YE3588 ff57e267d185c4b98b9bdbff88fbb684 467 Gene3D G3DSA:1.20.1250.20 269 458 6.4E-16 T 22-04-2016 YE3467 029406f693b2d8dbee87f64fad3099c4 317 TIGRFAM TIGR03756 conj_TIGR03756: integrating conjugative element protein, PFL_4710 family 27 315 1.3E-128 T 22-04-2016 IPR026331 Integrating conjugative element protein PFL_4710 YE3467 029406f693b2d8dbee87f64fad3099c4 317 Pfam PF06834 TraU protein 34 308 1.0E-68 T 22-04-2016 IPR009649 TraU YE2778 9c9bbad9f68d6a9ec0774412a9940929 293 PANTHER PTHR22572:SF118 2 290 4.4E-149 T 22-04-2016 YE2778 9c9bbad9f68d6a9ec0774412a9940929 293 SUPERFAMILY SSF53448 2 279 2.7E-59 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YE2778 9c9bbad9f68d6a9ec0774412a9940929 293 Gene3D G3DSA:3.90.550.10 2 274 7.3E-69 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YE2778 9c9bbad9f68d6a9ec0774412a9940929 293 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 2 269 1.1E-114 T 22-04-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 YE2778 9c9bbad9f68d6a9ec0774412a9940929 293 PANTHER PTHR22572 2 290 4.4E-149 T 22-04-2016 YE2778 9c9bbad9f68d6a9ec0774412a9940929 293 Pfam PF00483 Nucleotidyl transferase 2 269 3.6E-25 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 YE1457 7693bdf430ba650501dd766369fd4111 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 4.2E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE1457 7693bdf430ba650501dd766369fd4111 290 Pfam PF03466 LysR substrate binding domain 86 289 4.6E-47 T 22-04-2016 IPR005119 LysR, substrate-binding YE1457 7693bdf430ba650501dd766369fd4111 290 PANTHER PTHR30126 2 289 8.3E-196 T 22-04-2016 YE1457 7693bdf430ba650501dd766369fd4111 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.1E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE1457 7693bdf430ba650501dd766369fd4111 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.1E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE1457 7693bdf430ba650501dd766369fd4111 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.1E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE1457 7693bdf430ba650501dd766369fd4111 290 SUPERFAMILY SSF53850 89 289 5.33E-47 T 22-04-2016 YE1457 7693bdf430ba650501dd766369fd4111 290 PANTHER PTHR30126:SF36 2 289 8.3E-196 T 22-04-2016 YE1457 7693bdf430ba650501dd766369fd4111 290 Gene3D G3DSA:1.10.10.10 2 82 1.0E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1457 7693bdf430ba650501dd766369fd4111 290 SUPERFAMILY SSF46785 2 109 3.7E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1457 7693bdf430ba650501dd766369fd4111 290 Gene3D G3DSA:3.40.190.10 88 225 1.7E-33 T 22-04-2016 YE1214 4370d93085afb36cdf560568b4604077 186 PANTHER PTHR39166 1 186 1.5E-64 T 22-04-2016 YE1214 4370d93085afb36cdf560568b4604077 186 Pfam PF06042 Nucleotidyltransferase 23 183 5.3E-66 T 22-04-2016 IPR009267 Putative nucleotidyltransferase YE2477 49de98eca45990e1c1d03a1319e7cccd 369 PANTHER PTHR37958:SF1 7 369 1.6E-128 T 22-04-2016 YE2477 49de98eca45990e1c1d03a1319e7cccd 369 Pfam PF01699 Sodium/calcium exchanger protein 42 192 6.1E-14 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 YE2477 49de98eca45990e1c1d03a1319e7cccd 369 Pfam PF01699 Sodium/calcium exchanger protein 227 366 2.5E-7 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 YE2477 49de98eca45990e1c1d03a1319e7cccd 369 PANTHER PTHR37958 7 369 1.6E-128 T 22-04-2016 YE2477 49de98eca45990e1c1d03a1319e7cccd 369 TIGRFAM TIGR00846 caca2: calcium/proton exchanger 11 367 2.2E-103 T 22-04-2016 IPR004713 Calcium/proton exchanger GO:0006812|GO:0008324|GO:0016021|GO:0055085 YE1773 e99fed5ae42edd58cf57f1d078983331 153 Hamap MF_01071 UPF0266 membrane protein YobD [yobD]. 1 152 32.309 T 22-04-2016 IPR009328 Protein of unknown function DUF986 YE1773 e99fed5ae42edd58cf57f1d078983331 153 Pfam PF06173 Protein of unknown function (DUF986) 4 151 1.9E-65 T 22-04-2016 IPR009328 Protein of unknown function DUF986 YE1773 e99fed5ae42edd58cf57f1d078983331 153 ProDom PD091196 MEMBRANE UPF0266 TRANSMEMBRANE INNER YOBD PLU2700 LMO0779 PM0830 YPO1755/Y2554/YP1637 LIN0773 22 144 2.0E-59 T 22-04-2016 IPR009328 Protein of unknown function DUF986 YE1773 e99fed5ae42edd58cf57f1d078983331 153 PIRSF PIRSF020687 1 152 6.2E-71 T 22-04-2016 IPR009328 Protein of unknown function DUF986 YE1313 8d9752922165406e4a8737959689e738 239 PANTHER PTHR38687:SF1 2 239 6.6E-62 T 22-04-2016 YE1313 8d9752922165406e4a8737959689e738 239 SUPERFAMILY SSF110997 160 232 3.01E-13 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 YE1313 8d9752922165406e4a8737959689e738 239 Pfam PF05036 Sporulation related domain 160 232 8.3E-11 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 YE1313 8d9752922165406e4a8737959689e738 239 PANTHER PTHR38687 2 239 6.6E-62 T 22-04-2016 YE1313 8d9752922165406e4a8737959689e738 239 Gene3D G3DSA:3.30.70.1070 158 232 1.9E-14 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 YE1313 8d9752922165406e4a8737959689e738 239 Hamap MF_02022 Cell division protein DedD [dedD]. 10 237 26.597 T 22-04-2016 IPR032898 Cell division protein DedD GO:0030428|GO:0032506 YE0064 183ada4498d340bd390c602cce3ab8ad 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 57 9.0E-29 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0064 183ada4498d340bd390c602cce3ab8ad 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.265 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0064 183ada4498d340bd390c602cce3ab8ad 78 Gene3D G3DSA:2.30.170.40 2 77 3.1E-35 T 22-04-2016 YE0064 183ada4498d340bd390c602cce3ab8ad 78 Pfam PF00830 Ribosomal L28 family 3 62 1.5E-25 T 22-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 YE0064 183ada4498d340bd390c602cce3ab8ad 78 PANTHER PTHR13528 1 74 7.0E-34 T 22-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 YE0064 183ada4498d340bd390c602cce3ab8ad 78 SUPERFAMILY SSF143800 1 77 6.47E-30 T 22-04-2016 YE0612 65cdd5f64d0480d54e7b6eafba72576a 299 PANTHER PTHR30293:SF2 4 299 1.1E-220 T 22-04-2016 YE0612 65cdd5f64d0480d54e7b6eafba72576a 299 Pfam PF03466 LysR substrate binding domain 98 288 9.2E-13 T 22-04-2016 IPR005119 LysR, substrate-binding YE0612 65cdd5f64d0480d54e7b6eafba72576a 299 Gene3D G3DSA:1.10.10.10 5 85 2.3E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0612 65cdd5f64d0480d54e7b6eafba72576a 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.1E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE0612 65cdd5f64d0480d54e7b6eafba72576a 299 PANTHER PTHR30293 4 299 1.1E-220 T 22-04-2016 YE0612 65cdd5f64d0480d54e7b6eafba72576a 299 SUPERFAMILY SSF46785 1 87 8.17E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0612 65cdd5f64d0480d54e7b6eafba72576a 299 SUPERFAMILY SSF53850 92 290 1.01E-26 T 22-04-2016 YE0612 65cdd5f64d0480d54e7b6eafba72576a 299 Gene3D G3DSA:3.40.190.10 99 229 1.2E-9 T 22-04-2016 YE0568 2f47ffd56f9ace2f4ae578e227407a13 265 PIRSF PIRSF005902 1 260 6.8E-67 T 22-04-2016 IPR001130 TatD family GO:0016788 YE0568 2f47ffd56f9ace2f4ae578e227407a13 265 SUPERFAMILY SSF51556 4 257 1.79E-72 T 22-04-2016 IPR032466 Metal-dependent hydrolase YE0568 2f47ffd56f9ace2f4ae578e227407a13 265 PANTHER PTHR10060 4 259 1.6E-79 T 22-04-2016 IPR001130 TatD family GO:0016788 YE0568 2f47ffd56f9ace2f4ae578e227407a13 265 Pfam PF01026 TatD related DNase 5 256 8.3E-65 T 22-04-2016 IPR001130 TatD family GO:0016788 YE0568 2f47ffd56f9ace2f4ae578e227407a13 265 Gene3D G3DSA:3.20.20.140 2 257 1.2E-74 T 22-04-2016 YE0568 2f47ffd56f9ace2f4ae578e227407a13 265 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 4 12 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 YE3923 a0390d77be1154b924ab7b5a15831ca0 209 SUPERFAMILY SSF50447 1 208 1.15E-79 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain YE3923 a0390d77be1154b924ab7b5a15831ca0 209 Pfam PF00297 Ribosomal protein L3 94 182 2.8E-12 T 22-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3923 a0390d77be1154b924ab7b5a15831ca0 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 22-04-2016 IPR019926 Ribosomal protein L3, conserved site YE3923 a0390d77be1154b924ab7b5a15831ca0 209 PANTHER PTHR11229 1 208 3.5E-123 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3923 a0390d77be1154b924ab7b5a15831ca0 209 Gene3D G3DSA:2.40.30.10 3 32 5.4E-7 T 22-04-2016 YE3923 a0390d77be1154b924ab7b5a15831ca0 209 Gene3D G3DSA:2.40.30.10 158 207 5.4E-7 T 22-04-2016 YE3923 a0390d77be1154b924ab7b5a15831ca0 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 204 3.6E-92 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3923 a0390d77be1154b924ab7b5a15831ca0 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 207 40.962 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3923 a0390d77be1154b924ab7b5a15831ca0 209 Gene3D G3DSA:4.10.960.10 77 157 1.3E-34 T 22-04-2016 YE0408 7d38206f9287b25ac9b17ec19e539a06 175 SUPERFAMILY SSF50324 3 175 4.45E-67 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 YE0408 7d38206f9287b25ac9b17ec19e539a06 175 Pfam PF00719 Inorganic pyrophosphatase 18 173 2.0E-54 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 YE0408 7d38206f9287b25ac9b17ec19e539a06 175 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 37.024 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 YE0408 7d38206f9287b25ac9b17ec19e539a06 175 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 YE0408 7d38206f9287b25ac9b17ec19e539a06 175 Gene3D G3DSA:3.90.80.10 4 174 1.2E-61 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 YE0408 7d38206f9287b25ac9b17ec19e539a06 175 PANTHER PTHR10286 6 175 4.5E-80 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 YE1099 382d154f570b0d4dff87614c08afb75e 296 SUPERFAMILY SSF111331 1 293 4.58E-69 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain YE1099 382d154f570b0d4dff87614c08afb75e 296 Hamap MF_01377 Probable lipid kinase YegS [yegS]. 1 296 49.96 T 22-04-2016 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 YE1099 382d154f570b0d4dff87614c08afb75e 296 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 5 290 5.2E-96 T 22-04-2016 IPR005218 Diacylglycerol/lipid kinase YE1099 382d154f570b0d4dff87614c08afb75e 296 TIGRFAM TIGR03702 lip_kinase_YegS: lipid kinase YegS 3 295 1.6E-146 T 22-04-2016 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 YE1099 382d154f570b0d4dff87614c08afb75e 296 Pfam PF00781 Diacylglycerol kinase catalytic domain 4 126 6.0E-29 T 22-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 YE1099 382d154f570b0d4dff87614c08afb75e 296 PANTHER PTHR12358 2 294 9.4E-66 T 22-04-2016 YE1099 382d154f570b0d4dff87614c08afb75e 296 SMART SM00046 3 130 4.8E-20 T 22-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 YE1636 6921b6e3b114446f07f2df933b9c9d46 78 Gene3D G3DSA:1.10.1200.10 3 77 4.5E-35 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YE1636 6921b6e3b114446f07f2df933b9c9d46 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 77 3.9E-37 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 YE1636 6921b6e3b114446f07f2df933b9c9d46 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 76 0.003 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 YE1636 6921b6e3b114446f07f2df933b9c9d46 78 PANTHER PTHR20863 4 78 2.1E-31 T 22-04-2016 YE1636 6921b6e3b114446f07f2df933b9c9d46 78 SUPERFAMILY SSF47336 2 76 1.09E-23 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YE1636 6921b6e3b114446f07f2df933b9c9d46 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 7.3E-16 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YE1636 6921b6e3b114446f07f2df933b9c9d46 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.174 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 YE1636 6921b6e3b114446f07f2df933b9c9d46 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site YE3890 96e5bc50956e8d3d32e41d3ef0d9c560 315 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 22-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YE3890 96e5bc50956e8d3d32e41d3ef0d9c560 315 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 310 6.8E-115 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YE3890 96e5bc50956e8d3d32e41d3ef0d9c560 315 SUPERFAMILY SSF50486 208 310 8.44E-37 T 22-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 YE3890 96e5bc50956e8d3d32e41d3ef0d9c560 315 Gene3D G3DSA:3.40.50.170 4 208 3.1E-74 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YE3890 96e5bc50956e8d3d32e41d3ef0d9c560 315 SUPERFAMILY SSF53328 5 207 9.68E-67 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YE3890 96e5bc50956e8d3d32e41d3ef0d9c560 315 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 307 36.943 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YE3890 96e5bc50956e8d3d32e41d3ef0d9c560 315 Gene3D G3DSA:3.10.25.10 210 307 6.6E-36 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YE3890 96e5bc50956e8d3d32e41d3ef0d9c560 315 PANTHER PTHR11138 2 307 1.1E-122 T 22-04-2016 YE3890 96e5bc50956e8d3d32e41d3ef0d9c560 315 Pfam PF00551 Formyl transferase 6 181 1.4E-51 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YE3890 96e5bc50956e8d3d32e41d3ef0d9c560 315 Pfam PF02911 Formyl transferase, C-terminal domain 207 304 3.2E-31 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YE1395 fa60aaa2041a68c824e4a72e8db51cec 885 Gene3D G3DSA:1.10.268.10 363 497 3.6E-48 T 22-04-2016 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 YE1395 fa60aaa2041a68c824e4a72e8db51cec 885 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 843 30.322 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YE1395 fa60aaa2041a68c824e4a72e8db51cec 885 Gene3D G3DSA:3.90.199.10 34 216 3.5E-84 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 YE1395 fa60aaa2041a68c824e4a72e8db51cec 885 Gene3D G3DSA:2.120.10.90 531 839 1.3E-144 T 22-04-2016 YE1395 fa60aaa2041a68c824e4a72e8db51cec 885 SUPERFAMILY SSF56719 30 521 1.44E-182 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 YE1395 fa60aaa2041a68c824e4a72e8db51cec 885 PANTHER PTHR10169:SF48 450 812 0.0 T 22-04-2016 YE1395 fa60aaa2041a68c824e4a72e8db51cec 885 PANTHER PTHR10169:SF48 2 418 0.0 T 22-04-2016 YE1395 fa60aaa2041a68c824e4a72e8db51cec 885 PANTHER PTHR10169 450 812 0.0 T 22-04-2016 YE1395 fa60aaa2041a68c824e4a72e8db51cec 885 PANTHER PTHR10169 2 418 0.0 T 22-04-2016 YE1395 fa60aaa2041a68c824e4a72e8db51cec 885 Gene3D G3DSA:3.30.1360.40 236 333 2.2E-38 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain YE1395 fa60aaa2041a68c824e4a72e8db51cec 885 SUPERFAMILY SSF101904 533 848 4.58E-115 T 22-04-2016 YE1395 fa60aaa2041a68c824e4a72e8db51cec 885 SMART SM00434 11 499 1.0E-298 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 YE1395 fa60aaa2041a68c824e4a72e8db51cec 885 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 506 1.2E-151 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 YE1395 fa60aaa2041a68c824e4a72e8db51cec 885 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 743 789 8.0E-15 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 YE1395 fa60aaa2041a68c824e4a72e8db51cec 885 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 693 737 1.6E-15 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 YE1395 fa60aaa2041a68c824e4a72e8db51cec 885 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 793 839 3.8E-13 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 YE1395 fa60aaa2041a68c824e4a72e8db51cec 885 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 538 584 2.4E-10 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 YE1395 fa60aaa2041a68c824e4a72e8db51cec 885 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 588 637 4.7E-11 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 YE1395 fa60aaa2041a68c824e4a72e8db51cec 885 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 645 688 1.2E-8 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 YE1395 fa60aaa2041a68c824e4a72e8db51cec 885 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 840 0.0 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YE3995 855929c8f75b0bc8ce4867b2f037c3a4 258 PANTHER PTHR10992:SF812 1 255 2.2E-135 T 22-04-2016 YE3995 855929c8f75b0bc8ce4867b2f037c3a4 258 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 4 254 47.287 T 22-04-2016 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519|UniPathway: UPA00078 YE3995 855929c8f75b0bc8ce4867b2f037c3a4 258 SUPERFAMILY SSF53474 3 252 5.86E-51 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE3995 855929c8f75b0bc8ce4867b2f037c3a4 258 Pfam PF00561 alpha/beta hydrolase fold 16 241 1.3E-25 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 YE3995 855929c8f75b0bc8ce4867b2f037c3a4 258 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 10 252 2.2E-106 T 22-04-2016 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519|UniPathway: UPA00078 YE3995 855929c8f75b0bc8ce4867b2f037c3a4 258 Gene3D G3DSA:3.40.50.1820 3 255 2.3E-58 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE3995 855929c8f75b0bc8ce4867b2f037c3a4 258 PANTHER PTHR10992 1 255 2.2E-135 T 22-04-2016 YE3392 58945a373b3094fa90a38eafd9fed027 128 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 127 3.8E-55 T 22-04-2016 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 YE3392 58945a373b3094fa90a38eafd9fed027 128 Gene3D G3DSA:2.40.50.100 7 128 7.0E-50 T 22-04-2016 YE3392 58945a373b3094fa90a38eafd9fed027 128 PANTHER PTHR11715:SF12 1 128 4.0E-73 T 22-04-2016 YE3392 58945a373b3094fa90a38eafd9fed027 128 SUPERFAMILY SSF51230 4 127 3.48E-44 T 22-04-2016 IPR011053 Single hybrid motif YE3392 58945a373b3094fa90a38eafd9fed027 128 Pfam PF01597 Glycine cleavage H-protein 8 127 7.8E-47 T 22-04-2016 IPR002930 Glycine cleavage system H-protein YE3392 58945a373b3094fa90a38eafd9fed027 128 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site YE3392 58945a373b3094fa90a38eafd9fed027 128 PANTHER PTHR11715 1 128 4.0E-73 T 22-04-2016 IPR002930 Glycine cleavage system H-protein YE3392 58945a373b3094fa90a38eafd9fed027 128 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 127 31.321 T 22-04-2016 IPR002930 Glycine cleavage system H-protein YE1334 271a11cd264d87a31f53a5978469ea34 400 Gene3D G3DSA:3.30.420.40 5 207 2.7E-11 T 22-04-2016 YE1334 271a11cd264d87a31f53a5978469ea34 400 SUPERFAMILY SSF53067 4 199 2.01E-62 T 22-04-2016 YE1334 271a11cd264d87a31f53a5978469ea34 400 PIRSF PIRSF000722 2 400 9.8E-143 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YE1334 271a11cd264d87a31f53a5978469ea34 400 TIGRFAM TIGR00016 ackA: acetate kinase 1 399 6.9E-183 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YE1334 271a11cd264d87a31f53a5978469ea34 400 PANTHER PTHR21060 2 398 7.2E-281 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YE1334 271a11cd264d87a31f53a5978469ea34 400 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 206 223 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YE1334 271a11cd264d87a31f53a5978469ea34 400 PANTHER PTHR21060:SF15 2 398 7.2E-281 T 22-04-2016 YE1334 271a11cd264d87a31f53a5978469ea34 400 Pfam PF00871 Acetokinase family 6 393 3.9E-174 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YE1334 271a11cd264d87a31f53a5978469ea34 400 PRINTS PR00471 Acetate kinase family signature 325 341 1.6E-48 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YE1334 271a11cd264d87a31f53a5978469ea34 400 PRINTS PR00471 Acetate kinase family signature 380 392 1.6E-48 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YE1334 271a11cd264d87a31f53a5978469ea34 400 PRINTS PR00471 Acetate kinase family signature 206 227 1.6E-48 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YE1334 271a11cd264d87a31f53a5978469ea34 400 PRINTS PR00471 Acetate kinase family signature 176 189 1.6E-48 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YE1334 271a11cd264d87a31f53a5978469ea34 400 PRINTS PR00471 Acetate kinase family signature 6 17 1.6E-48 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YE1334 271a11cd264d87a31f53a5978469ea34 400 PRINTS PR00471 Acetate kinase family signature 302 315 1.6E-48 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YE1334 271a11cd264d87a31f53a5978469ea34 400 Gene3D G3DSA:3.30.420.40 208 398 2.0E-75 T 22-04-2016 YE1334 271a11cd264d87a31f53a5978469ea34 400 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 6 17 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YE1334 271a11cd264d87a31f53a5978469ea34 400 Hamap MF_00020 Acetate kinase [ackA]. 1 400 187.406 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YE1334 271a11cd264d87a31f53a5978469ea34 400 SUPERFAMILY SSF53067 160 398 1.12E-84 T 22-04-2016 YE2718 8d70eac954bf2b309c5128318f07e9d1 241 PANTHER PTHR21091:SF9 1 164 1.5E-50 T 22-04-2016 YE2718 8d70eac954bf2b309c5128318f07e9d1 241 TIGRFAM TIGR01466 cobJ_cbiH: precorrin-3B C17-methyltransferase 2 239 3.5E-103 T 22-04-2016 IPR006363 Precorrin-3B C17-methyltransferase domain GO:0008168|GO:0009236 YE2718 8d70eac954bf2b309c5128318f07e9d1 241 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 1 208 4.6E-36 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 YE2718 8d70eac954bf2b309c5128318f07e9d1 241 Gene3D G3DSA:3.40.1010.10 1 112 1.9E-30 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 YE2718 8d70eac954bf2b309c5128318f07e9d1 241 Gene3D G3DSA:3.30.950.10 113 224 6.6E-12 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 YE2718 8d70eac954bf2b309c5128318f07e9d1 241 PANTHER PTHR21091 1 164 1.5E-50 T 22-04-2016 YE2718 8d70eac954bf2b309c5128318f07e9d1 241 SUPERFAMILY SSF53790 1 239 5.1E-54 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 YE2058 d0cc03bfd52ac845a1767ceaee7553f8 1011 Pfam PF07520 Virulence factor SrfB 1 1008 0.0 T 22-04-2016 IPR009216 Virulence factor SrfB YE2058 d0cc03bfd52ac845a1767ceaee7553f8 1011 Gene3D G3DSA:3.30.420.40 569 664 4.9E-4 T 22-04-2016 YE2058 d0cc03bfd52ac845a1767ceaee7553f8 1011 PIRSF PIRSF034585 1 1011 0.0 T 22-04-2016 IPR009216 Virulence factor SrfB YE2913 0f4fe285c4d471ca5b4337e05036dd5b 258 Gene3D G3DSA:3.40.190.10 111 217 1.6E-44 T 22-04-2016 YE2913 0f4fe285c4d471ca5b4337e05036dd5b 258 PIRSF PIRSF004846 5 258 1.2E-78 T 22-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 YE2913 0f4fe285c4d471ca5b4337e05036dd5b 258 Gene3D G3DSA:3.40.190.10 218 256 1.9E-14 T 22-04-2016 YE2913 0f4fe285c4d471ca5b4337e05036dd5b 258 Gene3D G3DSA:3.40.190.10 30 110 1.9E-14 T 22-04-2016 YE2913 0f4fe285c4d471ca5b4337e05036dd5b 258 PANTHER PTHR30632 22 255 1.1E-76 T 22-04-2016 YE2913 0f4fe285c4d471ca5b4337e05036dd5b 258 PANTHER PTHR30632:SF0 22 255 1.1E-76 T 22-04-2016 YE2913 0f4fe285c4d471ca5b4337e05036dd5b 258 Pfam PF13531 Bacterial extracellular solute-binding protein 30 255 4.5E-49 T 22-04-2016 YE2913 0f4fe285c4d471ca5b4337e05036dd5b 258 SUPERFAMILY SSF53850 29 256 2.79E-69 T 22-04-2016 YE2913 0f4fe285c4d471ca5b4337e05036dd5b 258 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 35 254 2.1E-79 T 22-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 YE0336 e4203d913821e3e505f9386b8c75e8fe 330 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 22 312 1.3E-77 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YE0336 e4203d913821e3e505f9386b8c75e8fe 330 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 49 62 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 YE0336 e4203d913821e3e505f9386b8c75e8fe 330 Gene3D G3DSA:3.40.50.1100 77 323 1.3E-74 T 22-04-2016 YE0336 e4203d913821e3e505f9386b8c75e8fe 330 TIGRFAM TIGR01127 ilvA_1Cterm: threonine ammonia-lyase 28 323 1.4E-118 T 22-04-2016 IPR005789 Threonine dehydratase, catabolic GO:0004794|GO:0006567 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00052 YE0336 e4203d913821e3e505f9386b8c75e8fe 330 PANTHER PTHR10314:SF17 9 323 2.9E-148 T 22-04-2016 YE0336 e4203d913821e3e505f9386b8c75e8fe 330 SUPERFAMILY SSF53686 10 320 1.22E-93 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YE0336 e4203d913821e3e505f9386b8c75e8fe 330 PANTHER PTHR10314 9 323 2.9E-148 T 22-04-2016 YE1191 66920adf86076a835ffe7f1c62dfd748 136 PANTHER PTHR34986 1 136 4.6E-78 T 22-04-2016 YE1191 66920adf86076a835ffe7f1c62dfd748 136 Pfam PF04074 Domain of unknown function (DUF386) 2 132 1.1E-39 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family YE1191 66920adf86076a835ffe7f1c62dfd748 136 Gene3D G3DSA:2.60.120.370 2 135 1.5E-45 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family YE1191 66920adf86076a835ffe7f1c62dfd748 136 PANTHER PTHR34986:SF2 1 136 4.6E-78 T 22-04-2016 YE1191 66920adf86076a835ffe7f1c62dfd748 136 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 2 135 1.7E-42 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family YE1191 66920adf86076a835ffe7f1c62dfd748 136 SUPERFAMILY SSF51197 2 136 3.57E-42 T 22-04-2016 YE3513 d4815eb55748c3a10d88db7ebd94797f 528 Pfam PF02195 ParB-like nuclease domain 42 92 1.7E-4 T 22-04-2016 IPR003115 ParB/Sulfiredoxin YE3513 d4815eb55748c3a10d88db7ebd94797f 528 SUPERFAMILY SSF110849 41 162 9.77E-9 T 22-04-2016 IPR003115 ParB/Sulfiredoxin YE3513 d4815eb55748c3a10d88db7ebd94797f 528 TIGRFAM TIGR03764 ICE_PFGI_1_parB: integrating conjugative element, PFGI_1 class, ParB family protein 30 294 9.3E-119 T 22-04-2016 IPR022304 Integrating conjugative element, PFGI-1, ParB YE3513 d4815eb55748c3a10d88db7ebd94797f 528 Gene3D G3DSA:3.90.1530.10 40 109 1.2E-6 T 22-04-2016 YE0971 8eea6af70eff0046a1694c3fbc4d6f4d 276 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 218 260 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 YE0971 8eea6af70eff0046a1694c3fbc4d6f4d 276 Pfam PF12833 Helix-turn-helix domain 192 265 7.8E-16 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YE0971 8eea6af70eff0046a1694c3fbc4d6f4d 276 Pfam PF07883 Cupin domain 21 73 8.1E-7 T 22-04-2016 IPR013096 Cupin 2, conserved barrel YE0971 8eea6af70eff0046a1694c3fbc4d6f4d 276 SMART SM00342 182 264 6.2E-17 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YE0971 8eea6af70eff0046a1694c3fbc4d6f4d 276 Gene3D G3DSA:1.10.10.60 216 267 6.5E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE0971 8eea6af70eff0046a1694c3fbc4d6f4d 276 PANTHER PTHR11019:SF120 1 272 5.3E-168 T 22-04-2016 YE0971 8eea6af70eff0046a1694c3fbc4d6f4d 276 Gene3D G3DSA:2.60.120.10 22 88 3.1E-11 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YE0971 8eea6af70eff0046a1694c3fbc4d6f4d 276 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 233 248 3.6E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YE0971 8eea6af70eff0046a1694c3fbc4d6f4d 276 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 248 264 3.6E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YE0971 8eea6af70eff0046a1694c3fbc4d6f4d 276 SUPERFAMILY SSF51182 7 88 1.31E-12 T 22-04-2016 IPR011051 RmlC-like cupin domain YE0971 8eea6af70eff0046a1694c3fbc4d6f4d 276 SUPERFAMILY SSF46689 217 267 1.39E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE0971 8eea6af70eff0046a1694c3fbc4d6f4d 276 PANTHER PTHR11019 1 272 5.3E-168 T 22-04-2016 YE2964 04d1833f68d08e84e5748705143fd716 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 227 3.6E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YE2964 04d1833f68d08e84e5748705143fd716 229 SMART SM00448 6 116 8.0E-38 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE2964 04d1833f68d08e84e5748705143fd716 229 SUPERFAMILY SSF52172 4 181 2.05E-38 T 22-04-2016 IPR011006 CheY-like superfamily YE2964 04d1833f68d08e84e5748705143fd716 229 Gene3D G3DSA:1.10.10.10 129 228 1.5E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2964 04d1833f68d08e84e5748705143fd716 229 SMART SM00862 151 227 2.7E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YE2964 04d1833f68d08e84e5748705143fd716 229 PANTHER PTHR26402 6 229 9.6E-115 T 22-04-2016 YE2964 04d1833f68d08e84e5748705143fd716 229 Pfam PF00072 Response regulator receiver domain 8 117 7.7E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE2964 04d1833f68d08e84e5748705143fd716 229 PANTHER PTHR26402:SF399 6 229 9.6E-115 T 22-04-2016 YE2964 04d1833f68d08e84e5748705143fd716 229 Gene3D G3DSA:3.40.50.2300 6 128 1.5E-36 T 22-04-2016 YE1631 7f3eaee928b008b8c80fd81346c2a94d 55 SUPERFAMILY SSF57829 2 54 1.04E-18 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 YE1631 7f3eaee928b008b8c80fd81346c2a94d 55 Pfam PF01783 Ribosomal L32p protein family 2 54 1.1E-19 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 YE1631 7f3eaee928b008b8c80fd81346c2a94d 55 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.225 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 YE1631 7f3eaee928b008b8c80fd81346c2a94d 55 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 3.5E-20 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 YE0813 7e4a7f4e9d53993f647c724b7b4b899b 163 Gene3D G3DSA:3.40.35.10 1 159 2.3E-60 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 YE0813 7e4a7f4e9d53993f647c724b7b4b899b 163 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 3 152 2.2E-61 T 22-04-2016 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 YE0813 7e4a7f4e9d53993f647c724b7b4b899b 163 SUPERFAMILY SSF52728 1 159 3.53E-53 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 YE0813 7e4a7f4e9d53993f647c724b7b4b899b 163 PANTHER PTHR33799 1 161 2.5E-74 T 22-04-2016 YE0813 7e4a7f4e9d53993f647c724b7b4b899b 163 PANTHER PTHR33799:SF3 1 161 2.5E-74 T 22-04-2016 YE0813 7e4a7f4e9d53993f647c724b7b4b899b 163 Pfam PF03830 PTS system sorbose subfamily IIB component 3 149 3.4E-52 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 YE1768 a4f4b37ab1ddfa2dcfc6686fb13a20f0 286 PIRSF PIRSF018249 1 272 6.3E-82 T 22-04-2016 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 YE1768 a4f4b37ab1ddfa2dcfc6686fb13a20f0 286 SUPERFAMILY SSF53335 4 246 1.46E-42 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE1768 a4f4b37ab1ddfa2dcfc6686fb13a20f0 286 Pfam PF13847 Methyltransferase domain 86 199 1.5E-10 T 22-04-2016 IPR025714 Methyltransferase domain YE1768 a4f4b37ab1ddfa2dcfc6686fb13a20f0 286 PANTHER PTHR10108:SF886 17 270 1.2E-40 T 22-04-2016 YE1768 a4f4b37ab1ddfa2dcfc6686fb13a20f0 286 PANTHER PTHR10108 17 270 1.2E-40 T 22-04-2016 YE1768 a4f4b37ab1ddfa2dcfc6686fb13a20f0 286 Gene3D G3DSA:3.40.50.150 64 205 6.0E-19 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE3741 206779735ac24d6f3f6ac319c1bc53b1 142 SUPERFAMILY SSF52161 1 140 3.4E-60 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 YE3741 206779735ac24d6f3f6ac319c1bc53b1 142 PANTHER PTHR11545 1 142 1.3E-81 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 YE3741 206779735ac24d6f3f6ac319c1bc53b1 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 6.3E-67 T 22-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 YE3741 206779735ac24d6f3f6ac319c1bc53b1 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 22-04-2016 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 YE3741 206779735ac24d6f3f6ac319c1bc53b1 142 Pfam PF00572 Ribosomal protein L13 15 138 3.8E-56 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 YE3741 206779735ac24d6f3f6ac319c1bc53b1 142 Gene3D G3DSA:3.90.1180.10 3 141 1.6E-64 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 YE3741 206779735ac24d6f3f6ac319c1bc53b1 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.268 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 YE3741 206779735ac24d6f3f6ac319c1bc53b1 142 PIRSF PIRSF002181 1 142 9.7E-51 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 YE1885 db61ae4e91665ce403b0ea43c6d3f721 296 SUPERFAMILY SSF160964 4 42 1.23E-5 T 22-04-2016 YE1885 db61ae4e91665ce403b0ea43c6d3f721 296 SUPERFAMILY SSF161098 50 273 1.31E-58 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE1885 db61ae4e91665ce403b0ea43c6d3f721 296 Gene3D G3DSA:1.20.58.370 4 39 7.0E-5 T 22-04-2016 YE1885 db61ae4e91665ce403b0ea43c6d3f721 296 Gene3D G3DSA:1.10.3720.10 56 282 1.2E-60 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE1885 db61ae4e91665ce403b0ea43c6d3f721 296 PANTHER PTHR30193 3 292 1.7E-155 T 22-04-2016 YE1885 db61ae4e91665ce403b0ea43c6d3f721 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 274 1.2E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE1885 db61ae4e91665ce403b0ea43c6d3f721 296 PANTHER PTHR30193:SF1 3 292 1.7E-155 T 22-04-2016 YE2047 81c3ccb7e506d3945587f503995921e7 329 Gene3D G3DSA:3.60.110.10 7 306 1.2E-57 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 YE2047 81c3ccb7e506d3945587f503995921e7 329 PANTHER PTHR23088 7 186 6.9E-47 T 22-04-2016 YE2047 81c3ccb7e506d3945587f503995921e7 329 PANTHER PTHR23088 223 307 6.9E-47 T 22-04-2016 YE2047 81c3ccb7e506d3945587f503995921e7 329 SUPERFAMILY SSF56317 5 183 1.01E-53 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 YE2047 81c3ccb7e506d3945587f503995921e7 329 SUPERFAMILY SSF56317 217 284 1.01E-53 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 YE2047 81c3ccb7e506d3945587f503995921e7 329 Pfam PF00795 Carbon-nitrogen hydrolase 8 284 6.4E-38 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 YE3004 a3f9d7501897e71be04dbc1bafb82d51 365 SUPERFAMILY SSF110997 290 362 1.29E-15 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 YE3004 a3f9d7501897e71be04dbc1bafb82d51 365 SUPERFAMILY SSF50685 76 164 6.98E-9 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain YE3004 a3f9d7501897e71be04dbc1bafb82d51 365 Gene3D G3DSA:2.40.40.10 115 167 2.6E-4 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain YE3004 a3f9d7501897e71be04dbc1bafb82d51 365 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 78 177 4.4E-36 T 22-04-2016 IPR012997 Rare lipoprotein A YE3004 a3f9d7501897e71be04dbc1bafb82d51 365 PANTHER PTHR34183:SF1 287 365 3.2E-119 T 22-04-2016 YE3004 a3f9d7501897e71be04dbc1bafb82d51 365 PANTHER PTHR34183:SF1 32 228 3.2E-119 T 22-04-2016 YE3004 a3f9d7501897e71be04dbc1bafb82d51 365 PANTHER PTHR34183 287 365 3.2E-119 T 22-04-2016 YE3004 a3f9d7501897e71be04dbc1bafb82d51 365 PANTHER PTHR34183 32 228 3.2E-119 T 22-04-2016 YE3004 a3f9d7501897e71be04dbc1bafb82d51 365 Pfam PF03330 Lytic transglycolase 76 164 2.9E-25 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain YE3004 a3f9d7501897e71be04dbc1bafb82d51 365 Pfam PF05036 Sporulation related domain 290 362 1.2E-15 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 YE3004 a3f9d7501897e71be04dbc1bafb82d51 365 Gene3D G3DSA:3.30.70.1070 287 362 1.9E-17 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 YE1380 d5e3200a805098f4778cf45d9149e745 480 PRINTS PR00067 Catalase signature 106 123 2.2E-70 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 YE1380 d5e3200a805098f4778cf45d9149e745 480 PRINTS PR00067 Catalase signature 85 103 2.2E-70 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 YE1380 d5e3200a805098f4778cf45d9149e745 480 PRINTS PR00067 Catalase signature 125 143 2.2E-70 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 YE1380 d5e3200a805098f4778cf45d9149e745 480 PRINTS PR00067 Catalase signature 322 348 2.2E-70 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 YE1380 d5e3200a805098f4778cf45d9149e745 480 PRINTS PR00067 Catalase signature 22 45 2.2E-70 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 YE1380 d5e3200a805098f4778cf45d9149e745 480 PRINTS PR00067 Catalase signature 290 317 2.2E-70 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 YE1380 d5e3200a805098f4778cf45d9149e745 480 Pfam PF06628 Catalase-related immune-responsive 416 477 1.0E-21 T 22-04-2016 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 YE1380 d5e3200a805098f4778cf45d9149e745 480 Gene3D G3DSA:2.40.180.10 3 358 1.8E-173 T 22-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 YE1380 d5e3200a805098f4778cf45d9149e745 480 SMART SM01060 9 393 1.6E-280 T 22-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 YE1380 d5e3200a805098f4778cf45d9149e745 480 PIRSF PIRSF038928 1 480 3.6E-221 T 22-04-2016 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 YE1380 d5e3200a805098f4778cf45d9149e745 480 Pfam PF00199 Catalase 9 389 3.2E-187 T 22-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 YE1380 d5e3200a805098f4778cf45d9149e745 480 SUPERFAMILY SSF56634 4 479 6.02E-210 T 22-04-2016 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 YE1380 d5e3200a805098f4778cf45d9149e745 480 PANTHER PTHR11465 8 479 4.3E-295 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 YE1380 d5e3200a805098f4778cf45d9149e745 480 ProSitePatterns PS00438 Catalase proximal active site signature. 45 61 - T 22-04-2016 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 YE1724 ac776fb8081fd8243dc361ae1cea3827 208 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 66 80 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 YE1724 ac776fb8081fd8243dc361ae1cea3827 208 PANTHER PTHR21600 150 205 1.1E-96 T 22-04-2016 YE1724 ac776fb8081fd8243dc361ae1cea3827 208 PANTHER PTHR21600 1 132 1.1E-96 T 22-04-2016 YE1724 ac776fb8081fd8243dc361ae1cea3827 208 SUPERFAMILY SSF55120 29 206 7.84E-42 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 YE1724 ac776fb8081fd8243dc361ae1cea3827 208 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 35 206 3.0E-57 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 YE1724 ac776fb8081fd8243dc361ae1cea3827 208 Pfam PF00849 RNA pseudouridylate synthase 60 176 9.8E-12 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 YE1724 ac776fb8081fd8243dc361ae1cea3827 208 PANTHER PTHR21600:SF23 150 205 1.1E-96 T 22-04-2016 YE1724 ac776fb8081fd8243dc361ae1cea3827 208 PANTHER PTHR21600:SF23 1 132 1.1E-96 T 22-04-2016 YE0016 8dc2b8bf6e6464f0ff19b34092ab1ebd 175 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 9 167 3.4E-44 T 22-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 YE0016 8dc2b8bf6e6464f0ff19b34092ab1ebd 175 SUPERFAMILY SSF52540 6 168 6.11E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0016 8dc2b8bf6e6464f0ff19b34092ab1ebd 175 PANTHER PTHR19136 1 143 5.8E-40 T 22-04-2016 YE0016 8dc2b8bf6e6464f0ff19b34092ab1ebd 175 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 9 142 3.1E-47 T 22-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 YE0016 8dc2b8bf6e6464f0ff19b34092ab1ebd 175 Gene3D G3DSA:3.40.50.300 5 169 2.5E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0016 8dc2b8bf6e6464f0ff19b34092ab1ebd 175 PANTHER PTHR19136:SF82 1 143 5.8E-40 T 22-04-2016 YE0758 15880e5a5db4f2628348bbd13bcae1fe 135 PANTHER PTHR34873 1 135 1.3E-63 T 22-04-2016 YE0758 15880e5a5db4f2628348bbd13bcae1fe 135 PANTHER PTHR34873:SF2 1 135 1.3E-63 T 22-04-2016 YE0758 15880e5a5db4f2628348bbd13bcae1fe 135 SUPERFAMILY SSF143100 1 61 6.15E-15 T 22-04-2016 YE0758 15880e5a5db4f2628348bbd13bcae1fe 135 Gene3D G3DSA:1.10.1220.10 95 134 4.7E-6 T 22-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 YE0758 15880e5a5db4f2628348bbd13bcae1fe 135 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 3 129 2.7E-29 T 22-04-2016 IPR031807 HicB-like antitoxin of toxin-antitoxin system YE1106 a18cbfffd3cddcd244bf23554e2a320e 459 Gene3D G3DSA:1.20.1250.20 241 436 4.6E-11 T 22-04-2016 YE1106 a18cbfffd3cddcd244bf23554e2a320e 459 Hamap MF_01577 Putative multidrug resistance protein MdtD [mdtD]. 1 451 40.723 T 22-04-2016 IPR023721 Multidrug resistance protein MdtD, putative YE1106 a18cbfffd3cddcd244bf23554e2a320e 459 PANTHER PTHR23501 1 451 0.0 T 22-04-2016 YE1106 a18cbfffd3cddcd244bf23554e2a320e 459 Gene3D G3DSA:1.20.1250.20 2 180 3.0E-29 T 22-04-2016 YE1106 a18cbfffd3cddcd244bf23554e2a320e 459 SUPERFAMILY SSF103473 230 437 3.27E-57 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE1106 a18cbfffd3cddcd244bf23554e2a320e 459 SUPERFAMILY SSF103473 2 180 3.27E-57 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE1106 a18cbfffd3cddcd244bf23554e2a320e 459 Pfam PF07690 Major Facilitator Superfamily 1 391 5.8E-46 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YE1106 a18cbfffd3cddcd244bf23554e2a320e 459 PANTHER PTHR23501:SF36 1 451 0.0 T 22-04-2016 YE1394 79952babe300c29bdfcab006263d8f84 242 Pfam PF13489 Methyltransferase domain 57 197 7.3E-25 T 22-04-2016 YE1394 79952babe300c29bdfcab006263d8f84 242 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 16 234 2.7E-89 T 22-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 YE1394 79952babe300c29bdfcab006263d8f84 242 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 14 240 38.476 T 22-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 YE1394 79952babe300c29bdfcab006263d8f84 242 PANTHER PTHR10108:SF910 1 238 5.6E-166 T 22-04-2016 YE1394 79952babe300c29bdfcab006263d8f84 242 PANTHER PTHR10108 1 238 5.6E-166 T 22-04-2016 YE1394 79952babe300c29bdfcab006263d8f84 242 SUPERFAMILY SSF53335 20 235 6.85E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE1394 79952babe300c29bdfcab006263d8f84 242 Gene3D G3DSA:3.40.50.150 28 225 3.5E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE3143 365afc3f2828aba611dea111a50d6545 204 Gene3D G3DSA:1.20.120.80 25 202 3.2E-52 T 22-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 YE3143 365afc3f2828aba611dea111a50d6545 204 SUPERFAMILY SSF81452 21 202 7.85E-59 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 YE3143 365afc3f2828aba611dea111a50d6545 204 Pfam PF00510 Cytochrome c oxidase subunit III 16 202 1.4E-14 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 YE3143 365afc3f2828aba611dea111a50d6545 204 PANTHER PTHR11403:SF2 8 204 3.6E-121 T 22-04-2016 YE3143 365afc3f2828aba611dea111a50d6545 204 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 25 204 2.2E-89 T 22-04-2016 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 YE3143 365afc3f2828aba611dea111a50d6545 204 PANTHER PTHR11403 8 204 3.6E-121 T 22-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 YE1025 694e5bb2a6d3f90fcdf77951daef41c4 280 PANTHER PTHR30514:SF5 1 273 1.1E-176 T 22-04-2016 YE1025 694e5bb2a6d3f90fcdf77951daef41c4 280 SUPERFAMILY SSF46689 1 73 1.4E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE1025 694e5bb2a6d3f90fcdf77951daef41c4 280 Gene3D G3DSA:3.40.50.10490 99 269 3.6E-37 T 22-04-2016 YE1025 694e5bb2a6d3f90fcdf77951daef41c4 280 Pfam PF01418 Helix-turn-helix domain, rpiR family 2 73 2.1E-24 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 YE1025 694e5bb2a6d3f90fcdf77951daef41c4 280 PANTHER PTHR30514 1 273 1.1E-176 T 22-04-2016 YE1025 694e5bb2a6d3f90fcdf77951daef41c4 280 Gene3D G3DSA:1.10.10.10 1 75 3.1E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1025 694e5bb2a6d3f90fcdf77951daef41c4 280 Pfam PF01380 SIS domain 126 255 7.8E-30 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 YE1025 694e5bb2a6d3f90fcdf77951daef41c4 280 SUPERFAMILY SSF53697 98 276 4.65E-38 T 22-04-2016 YE1901 12aae1752c0b2ebaf100fc64e0e4daac 220 PANTHER PTHR21666:SF216 39 220 2.4E-109 T 22-04-2016 YE1901 12aae1752c0b2ebaf100fc64e0e4daac 220 PANTHER PTHR21666 39 220 2.4E-109 T 22-04-2016 YE1901 12aae1752c0b2ebaf100fc64e0e4daac 220 SUPERFAMILY SSF53955 53 217 2.34E-29 T 22-04-2016 IPR023346 Lysozyme-like domain YE1901 12aae1752c0b2ebaf100fc64e0e4daac 220 Pfam PF01464 Transglycosylase SLT domain 57 182 3.4E-28 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 YE1901 12aae1752c0b2ebaf100fc64e0e4daac 220 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 75 103 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 YE1901 12aae1752c0b2ebaf100fc64e0e4daac 220 Gene3D G3DSA:1.10.530.10 53 218 5.7E-33 T 22-04-2016 YE2601 f9c548ca8158a56fc653ab2afdc14178 425 SUPERFAMILY SSF53448 344 359 7.27E-77 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YE2601 f9c548ca8158a56fc653ab2afdc14178 425 SUPERFAMILY SSF53448 19 294 7.27E-77 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YE2601 f9c548ca8158a56fc653ab2afdc14178 425 Pfam PF00483 Nucleotidyl transferase 22 290 8.7E-68 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 YE2601 f9c548ca8158a56fc653ab2afdc14178 425 Gene3D G3DSA:3.90.550.10 21 301 1.2E-76 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YE2601 f9c548ca8158a56fc653ab2afdc14178 425 Gene3D G3DSA:3.90.550.10 344 386 1.2E-76 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YE2601 f9c548ca8158a56fc653ab2afdc14178 425 PANTHER PTHR22572:SF10 21 401 5.6E-172 T 22-04-2016 YE2601 f9c548ca8158a56fc653ab2afdc14178 425 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 21 397 1.3E-153 T 22-04-2016 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 YE2601 f9c548ca8158a56fc653ab2afdc14178 425 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 26 45 - T 22-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 YE2601 f9c548ca8158a56fc653ab2afdc14178 425 SUPERFAMILY SSF51161 310 411 2.91E-18 T 22-04-2016 IPR011004 Trimeric LpxA-like YE2601 f9c548ca8158a56fc653ab2afdc14178 425 PANTHER PTHR22572 21 401 5.6E-172 T 22-04-2016 YE2601 f9c548ca8158a56fc653ab2afdc14178 425 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 17 423 51.406 T 22-04-2016 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 YE2601 f9c548ca8158a56fc653ab2afdc14178 425 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 211 221 - T 22-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 YE2601 f9c548ca8158a56fc653ab2afdc14178 425 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 113 121 - T 22-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 YE1427 592f4f4725ede2e09b601a8e2c02982b 530 Pfam PF00005 ABC transporter 27 185 6.6E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE1427 592f4f4725ede2e09b601a8e2c02982b 530 Pfam PF00005 ABC transporter 303 454 2.3E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE1427 592f4f4725ede2e09b601a8e2c02982b 530 SMART SM00382 312 502 3.6E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain YE1427 592f4f4725ede2e09b601a8e2c02982b 530 SMART SM00382 35 235 3.0E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain YE1427 592f4f4725ede2e09b601a8e2c02982b 530 ProSitePatterns PS00211 ABC transporters family signature. 426 440 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE1427 592f4f4725ede2e09b601a8e2c02982b 530 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE1427 592f4f4725ede2e09b601a8e2c02982b 530 PANTHER PTHR24220 8 411 6.2E-199 T 22-04-2016 YE1427 592f4f4725ede2e09b601a8e2c02982b 530 SUPERFAMILY SSF52540 6 257 1.01E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1427 592f4f4725ede2e09b601a8e2c02982b 530 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 264 6.3E-4 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 YE1427 592f4f4725ede2e09b601a8e2c02982b 530 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 505 527 0.45 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 YE1427 592f4f4725ede2e09b601a8e2c02982b 530 SUPERFAMILY SSF52540 276 525 2.46E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1427 592f4f4725ede2e09b601a8e2c02982b 530 PANTHER PTHR24220:SF574 8 411 6.2E-199 T 22-04-2016 YE1427 592f4f4725ede2e09b601a8e2c02982b 530 Gene3D G3DSA:3.40.50.300 275 527 3.8E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1427 592f4f4725ede2e09b601a8e2c02982b 530 Gene3D G3DSA:3.40.50.300 5 259 3.4E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0266 b304cfb00ef6b0d314ec2d821fb5d7ae 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 107 126 1.1E-12 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 YE0266 b304cfb00ef6b0d314ec2d821fb5d7ae 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 91 100 1.1E-12 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 YE0266 b304cfb00ef6b0d314ec2d821fb5d7ae 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 31 43 1.1E-12 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 YE0266 b304cfb00ef6b0d314ec2d821fb5d7ae 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 141 1.1E-12 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 YE0266 b304cfb00ef6b0d314ec2d821fb5d7ae 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 47 54 1.1E-12 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 YE0266 b304cfb00ef6b0d314ec2d821fb5d7ae 233 Pfam PF00175 Oxidoreductase NAD-binding domain 108 211 9.0E-22 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 YE0266 b304cfb00ef6b0d314ec2d821fb5d7ae 233 PANTHER PTHR19370 4 233 1.9E-127 T 22-04-2016 YE0266 b304cfb00ef6b0d314ec2d821fb5d7ae 233 Gene3D G3DSA:2.40.30.10 3 97 2.0E-28 T 22-04-2016 YE0266 b304cfb00ef6b0d314ec2d821fb5d7ae 233 Pfam PF00970 Oxidoreductase FAD-binding domain 6 96 3.1E-5 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain YE0266 b304cfb00ef6b0d314ec2d821fb5d7ae 233 SUPERFAMILY SSF63380 3 97 5.02E-20 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 YE0266 b304cfb00ef6b0d314ec2d821fb5d7ae 233 Gene3D G3DSA:3.40.50.80 101 231 1.1E-36 T 22-04-2016 YE0266 b304cfb00ef6b0d314ec2d821fb5d7ae 233 PANTHER PTHR19370:SF119 4 233 1.9E-127 T 22-04-2016 YE0266 b304cfb00ef6b0d314ec2d821fb5d7ae 233 SUPERFAMILY SSF52343 100 231 1.03E-33 T 22-04-2016 YE3074 9cbbf5421829c92af55dffd370f7a13c 321 Gene3D G3DSA:3.40.50.720 3 168 9.1E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3074 9cbbf5421829c92af55dffd370f7a13c 321 Gene3D G3DSA:3.40.50.720 210 258 9.1E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3074 9cbbf5421829c92af55dffd370f7a13c 321 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 233 3.6E-72 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 YE3074 9cbbf5421829c92af55dffd370f7a13c 321 Hamap MF_00956 GDP-L-fucose synthase [fcl]. 3 314 48.857 T 22-04-2016 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase GO:0009226|GO:0016491 KEGG: 00010+1.1.1.27|KEGG: 00051+1.1.1.271|KEGG: 00270+1.1.1.27|KEGG: 00520+1.1.1.271|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-66|MetaCyc: PWY-6901|UniPathway: UPA00128 YE3074 9cbbf5421829c92af55dffd370f7a13c 321 SUPERFAMILY SSF51735 3 318 2.07E-72 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3074 9cbbf5421829c92af55dffd370f7a13c 321 Gene3D G3DSA:3.90.25.10 259 305 1.1E-38 T 22-04-2016 YE3074 9cbbf5421829c92af55dffd370f7a13c 321 Gene3D G3DSA:3.90.25.10 169 209 1.1E-38 T 22-04-2016 YE3074 9cbbf5421829c92af55dffd370f7a13c 321 PANTHER PTHR10366:SF246 5 321 4.3E-137 T 22-04-2016 YE3074 9cbbf5421829c92af55dffd370f7a13c 321 PANTHER PTHR10366 5 321 4.3E-137 T 22-04-2016 YE1128 93dca4161445640c32786c541d97185f 208 PANTHER PTHR10285 1 197 1.9E-101 T 22-04-2016 YE1128 93dca4161445640c32786c541d97185f 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 43.773 T 22-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 YE1128 93dca4161445640c32786c541d97185f 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 208 1.6E-89 T 22-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 YE1128 93dca4161445640c32786c541d97185f 208 SUPERFAMILY SSF53271 4 206 1.7E-66 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YE1128 93dca4161445640c32786c541d97185f 208 Gene3D G3DSA:3.40.50.2020 2 208 4.6E-74 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YE1128 93dca4161445640c32786c541d97185f 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 6.1E-64 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YE0666 2275d930c636b8813fb0a4fd06dcb1a9 587 Pfam PF00905 Penicillin binding protein transpeptidase domain 259 553 1.4E-80 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 YE0666 2275d930c636b8813fb0a4fd06dcb1a9 587 PANTHER PTHR30627:SF1 7 586 4.2E-253 T 22-04-2016 YE0666 2275d930c636b8813fb0a4fd06dcb1a9 587 SUPERFAMILY SSF56519 62 233 9.03E-45 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 YE0666 2275d930c636b8813fb0a4fd06dcb1a9 587 SUPERFAMILY SSF56601 234 562 9.98E-86 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YE0666 2275d930c636b8813fb0a4fd06dcb1a9 587 Pfam PF03717 Penicillin-binding Protein dimerisation domain 67 219 1.1E-18 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 YE0666 2275d930c636b8813fb0a4fd06dcb1a9 587 Gene3D G3DSA:3.40.710.10 242 559 1.4E-84 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YE0666 2275d930c636b8813fb0a4fd06dcb1a9 587 Gene3D G3DSA:3.90.1310.10 141 241 3.9E-31 T 22-04-2016 YE0666 2275d930c636b8813fb0a4fd06dcb1a9 587 PANTHER PTHR30627 7 586 4.2E-253 T 22-04-2016 YE0528 514ffc0384df7281d60ef6d3758e4089 527 SUPERFAMILY SSF52540 10 230 3.41E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0528 514ffc0384df7281d60ef6d3758e4089 527 ProSitePatterns PS00211 ABC transporters family signature. 407 421 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE0528 514ffc0384df7281d60ef6d3758e4089 527 Gene3D G3DSA:3.40.50.300 265 485 5.0E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0528 514ffc0384df7281d60ef6d3758e4089 527 Pfam PF00005 ABC transporter 27 169 1.5E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE0528 514ffc0384df7281d60ef6d3758e4089 527 Pfam PF00005 ABC transporter 284 434 1.8E-17 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE0528 514ffc0384df7281d60ef6d3758e4089 527 Gene3D G3DSA:3.40.50.300 10 230 2.3E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0528 514ffc0384df7281d60ef6d3758e4089 527 PANTHER PTHR24220 13 391 1.1E-266 T 22-04-2016 YE0528 514ffc0384df7281d60ef6d3758e4089 527 SUPERFAMILY SSF52540 282 484 3.47E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0528 514ffc0384df7281d60ef6d3758e4089 527 SMART SM00382 36 257 3.3E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain YE0528 514ffc0384df7281d60ef6d3758e4089 527 SMART SM00382 291 483 3.2E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain YE0528 514ffc0384df7281d60ef6d3758e4089 527 PANTHER PTHR24220:SF555 13 391 1.1E-266 T 22-04-2016 IPR030281 Autoinducer 2 import ATP-binding protein LsrA GO:0005524|GO:0006810|GO:0016021|GO:0042626 KEGG: 00920+3.6.3.- YE0369 cecb1fe8eaa25f5697c0dda2b16e10af 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 44.848 T 22-04-2016 IPR022894 Oligoribonuclease GO:0016788 YE0369 cecb1fe8eaa25f5697c0dda2b16e10af 181 Gene3D G3DSA:3.30.420.10 4 180 4.9E-72 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE0369 cecb1fe8eaa25f5697c0dda2b16e10af 181 SUPERFAMILY SSF53098 4 179 3.22E-48 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE0369 cecb1fe8eaa25f5697c0dda2b16e10af 181 PANTHER PTHR11046 2 180 5.0E-129 T 22-04-2016 YE0369 cecb1fe8eaa25f5697c0dda2b16e10af 181 Pfam PF00929 Exonuclease 9 170 1.0E-34 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III YE0369 cecb1fe8eaa25f5697c0dda2b16e10af 181 PANTHER PTHR11046:SF1 2 180 5.0E-129 T 22-04-2016 YE0369 cecb1fe8eaa25f5697c0dda2b16e10af 181 SMART SM00479 7 180 1.0E-21 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III YE0031 ff1eeb0df3c1188a3a888d58f20bb97d 296 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 13 288 23.033 T 22-04-2016 IPR023679 Uncharacterised protein family UPF0761, bacterial YE0031 ff1eeb0df3c1188a3a888d58f20bb97d 296 Pfam PF03631 Virulence factor BrkB 29 276 3.1E-53 T 22-04-2016 IPR017039 Virulence factor BrkB YE0031 ff1eeb0df3c1188a3a888d58f20bb97d 296 PANTHER PTHR30213 6 295 9.6E-110 T 22-04-2016 YE0031 ff1eeb0df3c1188a3a888d58f20bb97d 296 PIRSF PIRSF035875 5 295 5.0E-60 T 22-04-2016 IPR017039 Virulence factor BrkB YE0031 ff1eeb0df3c1188a3a888d58f20bb97d 296 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 19 277 1.8E-90 T 22-04-2016 IPR017039 Virulence factor BrkB YE0031 ff1eeb0df3c1188a3a888d58f20bb97d 296 PANTHER PTHR30213:SF0 6 295 9.6E-110 T 22-04-2016 YE3394 14a7734e75a282f9f50f4523d4fff0d9 404 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 394 3.4E-139 T 22-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 YE3394 14a7734e75a282f9f50f4523d4fff0d9 404 SUPERFAMILY SSF51905 271 388 7.5E-61 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE3394 14a7734e75a282f9f50f4523d4fff0d9 404 SUPERFAMILY SSF51905 4 180 7.5E-61 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE3394 14a7734e75a282f9f50f4523d4fff0d9 404 Pfam PF01494 FAD binding domain 4 349 9.7E-29 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 YE3394 14a7734e75a282f9f50f4523d4fff0d9 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 299 315 5.7E-19 T 22-04-2016 YE3394 14a7734e75a282f9f50f4523d4fff0d9 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 5.7E-19 T 22-04-2016 YE3394 14a7734e75a282f9f50f4523d4fff0d9 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 284 299 5.7E-19 T 22-04-2016 YE3394 14a7734e75a282f9f50f4523d4fff0d9 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 159 174 5.7E-19 T 22-04-2016 YE3394 14a7734e75a282f9f50f4523d4fff0d9 404 PANTHER PTHR13789 1 404 1.4E-185 T 22-04-2016 YE3394 14a7734e75a282f9f50f4523d4fff0d9 404 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 298 311 - T 22-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 YE3394 14a7734e75a282f9f50f4523d4fff0d9 404 Gene3D G3DSA:3.50.50.60 272 360 3.3E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE3394 14a7734e75a282f9f50f4523d4fff0d9 404 Gene3D G3DSA:3.50.50.60 3 185 3.3E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE3394 14a7734e75a282f9f50f4523d4fff0d9 404 PANTHER PTHR13789:SF5 1 404 1.4E-185 T 22-04-2016 YE2264 f5665e72008cdbcf3c5d0601573b34dc 137 Gene3D G3DSA:2.170.150.20 6 132 1.4E-57 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 YE2264 f5665e72008cdbcf3c5d0601573b34dc 137 SUPERFAMILY SSF51316 6 132 2.72E-56 T 22-04-2016 IPR011057 Mss4-like YE2264 f5665e72008cdbcf3c5d0601573b34dc 137 PANTHER PTHR10173 10 134 1.4E-58 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 YE2264 f5665e72008cdbcf3c5d0601573b34dc 137 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 3 129 36.29 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 YE2264 f5665e72008cdbcf3c5d0601573b34dc 137 PANTHER PTHR10173:SF18 10 134 1.4E-58 T 22-04-2016 YE2264 f5665e72008cdbcf3c5d0601573b34dc 137 Pfam PF01641 SelR domain 12 127 1.6E-51 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 YE2264 f5665e72008cdbcf3c5d0601573b34dc 137 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 8 135 3.6E-58 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 YE0584 586c173c07d82b32d32a905617fa26e2 548 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE0584 586c173c07d82b32d32a905617fa26e2 548 SUPERFAMILY SSF52540 296 521 2.71E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0584 586c173c07d82b32d32a905617fa26e2 548 Gene3D G3DSA:3.40.50.300 315 526 7.7E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0584 586c173c07d82b32d32a905617fa26e2 548 SUPERFAMILY SSF52540 7 236 6.03E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0584 586c173c07d82b32d32a905617fa26e2 548 Gene3D G3DSA:3.40.50.300 134 278 1.4E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0584 586c173c07d82b32d32a905617fa26e2 548 Gene3D G3DSA:3.40.50.300 7 95 1.4E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0584 586c173c07d82b32d32a905617fa26e2 548 PANTHER PTHR19211:SF7 1 548 0.0 T 22-04-2016 YE0584 586c173c07d82b32d32a905617fa26e2 548 PANTHER PTHR19211 1 548 0.0 T 22-04-2016 YE0584 586c173c07d82b32d32a905617fa26e2 548 SMART SM00382 341 515 7.7E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain YE0584 586c173c07d82b32d32a905617fa26e2 548 SMART SM00382 24 229 1.2E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain YE0584 586c173c07d82b32d32a905617fa26e2 548 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 1 546 9.9E-290 T 22-04-2016 IPR022374 ABC transporter, ATP-binding protein, ChvD YE0584 586c173c07d82b32d32a905617fa26e2 548 Pfam PF12848 ABC transporter 223 299 1.4E-11 T 22-04-2016 IPR032781 ABC-transporter extension domain YE0584 586c173c07d82b32d32a905617fa26e2 548 Pfam PF00005 ABC transporter 15 184 3.4E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE0584 586c173c07d82b32d32a905617fa26e2 548 Pfam PF00005 ABC transporter 333 466 1.2E-22 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE3889 f8200ae5128c1fbb86acebebf62dc974 170 Hamap MF_00163 Peptide deformylase [def]. 2 162 31.257 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 YE3889 f8200ae5128c1fbb86acebebf62dc974 170 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 6.8E-65 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 YE3889 f8200ae5128c1fbb86acebebf62dc974 170 PANTHER PTHR10458 1 168 4.0E-112 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 YE3889 f8200ae5128c1fbb86acebebf62dc974 170 Gene3D G3DSA:3.90.45.10 5 166 1.5E-63 T 22-04-2016 IPR023635 Peptide deformylase YE3889 f8200ae5128c1fbb86acebebf62dc974 170 PANTHER PTHR10458:SF10 1 168 4.0E-112 T 22-04-2016 YE3889 f8200ae5128c1fbb86acebebf62dc974 170 PIRSF PIRSF004749 1 169 9.4E-55 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 YE3889 f8200ae5128c1fbb86acebebf62dc974 170 SUPERFAMILY SSF56420 3 165 7.2E-62 T 22-04-2016 IPR023635 Peptide deformylase YE3889 f8200ae5128c1fbb86acebebf62dc974 170 Pfam PF01327 Polypeptide deformylase 4 152 2.0E-49 T 22-04-2016 IPR023635 Peptide deformylase YE3889 f8200ae5128c1fbb86acebebf62dc974 170 PRINTS PR01576 Peptide deformylase signature 89 100 3.6E-38 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 YE3889 f8200ae5128c1fbb86acebebf62dc974 170 PRINTS PR01576 Peptide deformylase signature 33 62 3.6E-38 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 YE3889 f8200ae5128c1fbb86acebebf62dc974 170 PRINTS PR01576 Peptide deformylase signature 101 119 3.6E-38 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 YE3889 f8200ae5128c1fbb86acebebf62dc974 170 PRINTS PR01576 Peptide deformylase signature 120 149 3.6E-38 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 YE2210 75feb7007a70a79cfba1cd59ffb81eb2 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 4.6E-14 T 22-04-2016 YE2210 75feb7007a70a79cfba1cd59ffb81eb2 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 4.6E-14 T 22-04-2016 YE2210 75feb7007a70a79cfba1cd59ffb81eb2 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 4.6E-14 T 22-04-2016 YE2210 75feb7007a70a79cfba1cd59ffb81eb2 196 SUPERFAMILY SSF52317 3 190 4.41E-46 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YE2210 75feb7007a70a79cfba1cd59ffb81eb2 196 PRINTS PR00097 Anthranilate synthase component II signature 52 61 1.2E-36 T 22-04-2016 YE2210 75feb7007a70a79cfba1cd59ffb81eb2 196 PRINTS PR00097 Anthranilate synthase component II signature 104 112 1.2E-36 T 22-04-2016 YE2210 75feb7007a70a79cfba1cd59ffb81eb2 196 PRINTS PR00097 Anthranilate synthase component II signature 4 18 1.2E-36 T 22-04-2016 YE2210 75feb7007a70a79cfba1cd59ffb81eb2 196 PRINTS PR00097 Anthranilate synthase component II signature 124 136 1.2E-36 T 22-04-2016 YE2210 75feb7007a70a79cfba1cd59ffb81eb2 196 PRINTS PR00097 Anthranilate synthase component II signature 79 90 1.2E-36 T 22-04-2016 YE2210 75feb7007a70a79cfba1cd59ffb81eb2 196 PRINTS PR00097 Anthranilate synthase component II signature 166 179 1.2E-36 T 22-04-2016 YE2210 75feb7007a70a79cfba1cd59ffb81eb2 196 Gene3D G3DSA:3.40.50.880 3 189 2.8E-56 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YE2210 75feb7007a70a79cfba1cd59ffb81eb2 196 Pfam PF00117 Glutamine amidotransferase class-I 6 186 3.8E-44 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 YE2210 75feb7007a70a79cfba1cd59ffb81eb2 196 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 2.8E-6 T 22-04-2016 YE2210 75feb7007a70a79cfba1cd59ffb81eb2 196 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 2.8E-6 T 22-04-2016 YE2210 75feb7007a70a79cfba1cd59ffb81eb2 196 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 186 5.7E-56 T 22-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 YE2210 75feb7007a70a79cfba1cd59ffb81eb2 196 PANTHER PTHR11922 1 189 2.0E-91 T 22-04-2016 YE2210 75feb7007a70a79cfba1cd59ffb81eb2 196 PANTHER PTHR11922:SF25 1 189 2.0E-91 T 22-04-2016 YE0606 c1125b8fc69a8159c56ee1bf4634c9a6 455 PANTHER PTHR23508:SF5 7 455 1.3E-304 T 22-04-2016 YE0606 c1125b8fc69a8159c56ee1bf4634c9a6 455 Gene3D G3DSA:1.20.1250.20 33 240 1.1E-20 T 22-04-2016 YE0606 c1125b8fc69a8159c56ee1bf4634c9a6 455 Gene3D G3DSA:1.20.1250.20 259 443 5.6E-18 T 22-04-2016 YE0606 c1125b8fc69a8159c56ee1bf4634c9a6 455 Pfam PF07690 Major Facilitator Superfamily 77 403 2.7E-27 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YE0606 c1125b8fc69a8159c56ee1bf4634c9a6 455 SUPERFAMILY SSF103473 3 437 1.14E-63 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE0606 c1125b8fc69a8159c56ee1bf4634c9a6 455 PANTHER PTHR23508 7 455 1.3E-304 T 22-04-2016 YE3687 b03e30a4e8ad3506ea74dddf100ad1fe 625 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 49 391 7.2E-83 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YE3687 b03e30a4e8ad3506ea74dddf100ad1fe 625 PANTHER PTHR30480:SF5 33 623 1.5E-128 T 22-04-2016 YE3687 b03e30a4e8ad3506ea74dddf100ad1fe 625 Gene3D G3DSA:3.20.20.300 54 416 1.6E-96 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YE3687 b03e30a4e8ad3506ea74dddf100ad1fe 625 PRINTS PR00133 Glycosyl hydrolase family 3 signature 143 162 1.2E-5 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YE3687 b03e30a4e8ad3506ea74dddf100ad1fe 625 PRINTS PR00133 Glycosyl hydrolase family 3 signature 219 235 1.2E-5 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YE3687 b03e30a4e8ad3506ea74dddf100ad1fe 625 PRINTS PR00133 Glycosyl hydrolase family 3 signature 118 134 1.2E-5 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YE3687 b03e30a4e8ad3506ea74dddf100ad1fe 625 PRINTS PR00133 Glycosyl hydrolase family 3 signature 305 323 1.2E-5 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 YE3687 b03e30a4e8ad3506ea74dddf100ad1fe 625 Gene3D G3DSA:3.40.50.1700 417 623 1.5E-4 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 YE3687 b03e30a4e8ad3506ea74dddf100ad1fe 625 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 305 322 - T 22-04-2016 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 YE3687 b03e30a4e8ad3506ea74dddf100ad1fe 625 PANTHER PTHR30480 33 623 1.5E-128 T 22-04-2016 YE3687 b03e30a4e8ad3506ea74dddf100ad1fe 625 SUPERFAMILY SSF51445 30 421 2.32E-80 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YE3288 189c94dfcc0ab9a495312cea76c5f2f3 129 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 1 126 32.45 T 22-04-2016 IPR020911 Uncharacterised protein family UPF0325 YE3288 189c94dfcc0ab9a495312cea76c5f2f3 129 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 1 125 1.0E-66 T 22-04-2016 IPR020911 Uncharacterised protein family UPF0325 YE3288 189c94dfcc0ab9a495312cea76c5f2f3 129 Pfam PF11944 Protein of unknown function (DUF3461) 1 125 3.3E-57 T 22-04-2016 IPR020911 Uncharacterised protein family UPF0325 YE3282 df5aa52b71d4e9b7daa525b6afdbe6c5 248 Pfam PF00696 Amino acid kinase family 11 219 8.8E-28 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YE3282 df5aa52b71d4e9b7daa525b6afdbe6c5 248 PIRSF PIRSF005650 4 248 6.4E-91 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 YE3282 df5aa52b71d4e9b7daa525b6afdbe6c5 248 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 44.145 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 YE3282 df5aa52b71d4e9b7daa525b6afdbe6c5 248 SUPERFAMILY SSF53633 7 240 2.75E-73 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YE3282 df5aa52b71d4e9b7daa525b6afdbe6c5 248 Gene3D G3DSA:3.40.1160.10 3 240 5.0E-87 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YE3282 df5aa52b71d4e9b7daa525b6afdbe6c5 248 PANTHER PTHR21499 4 240 1.9E-113 T 22-04-2016 YE3282 df5aa52b71d4e9b7daa525b6afdbe6c5 248 PANTHER PTHR21499:SF23 4 240 1.9E-113 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 YE3282 df5aa52b71d4e9b7daa525b6afdbe6c5 248 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 5.4E-104 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 YE3158 ff0b1c72dc48549bbff4b6ba6b43c62d 329 Pfam PF02769 AIR synthase related protein, C-terminal domain 151 300 7.8E-11 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain YE3158 ff0b1c72dc48549bbff4b6ba6b43c62d 329 PANTHER PTHR30270 1 329 3.6E-153 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 YE3158 ff0b1c72dc48549bbff4b6ba6b43c62d 329 SUPERFAMILY SSF56042 143 305 7.63E-41 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain YE3158 ff0b1c72dc48549bbff4b6ba6b43c62d 329 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 3 319 32.744 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 YE3158 ff0b1c72dc48549bbff4b6ba6b43c62d 329 Gene3D G3DSA:3.90.650.10 146 322 1.3E-54 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain YE3158 ff0b1c72dc48549bbff4b6ba6b43c62d 329 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 4 322 1.7E-116 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 YE3158 ff0b1c72dc48549bbff4b6ba6b43c62d 329 SUPERFAMILY SSF55326 4 138 1.55E-34 T 22-04-2016 YE3158 ff0b1c72dc48549bbff4b6ba6b43c62d 329 PIRSF PIRSF005303 1 322 1.1E-89 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 YE3158 ff0b1c72dc48549bbff4b6ba6b43c62d 329 PANTHER PTHR30270:SF0 1 329 3.6E-153 T 22-04-2016 YE3158 ff0b1c72dc48549bbff4b6ba6b43c62d 329 Pfam PF00586 AIR synthase related protein, N-terminal domain 29 138 8.3E-22 T 22-04-2016 IPR016188 PurM-like, N-terminal domain YE3158 ff0b1c72dc48549bbff4b6ba6b43c62d 329 Gene3D G3DSA:3.30.1330.10 3 140 1.5E-46 T 22-04-2016 IPR016188 PurM-like, N-terminal domain YE3430 90971dbf0cf952c27bf6ff6d43b7bc26 294 PANTHER PTHR23088 1 288 5.7E-155 T 22-04-2016 YE3430 90971dbf0cf952c27bf6ff6d43b7bc26 294 SUPERFAMILY SSF56317 1 285 2.49E-81 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 YE3430 90971dbf0cf952c27bf6ff6d43b7bc26 294 Pfam PF00795 Carbon-nitrogen hydrolase 5 268 2.3E-53 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 YE3430 90971dbf0cf952c27bf6ff6d43b7bc26 294 TIGRFAM TIGR03381 agmatine_aguB: N-carbamoylputrescine amidase 4 284 8.9E-146 T 22-04-2016 IPR017755 N-carbamoylputrescine amidase GO:0006596|GO:0050126 KEGG: 00330+3.5.1.53|MetaCyc: PWY-43|UniPathway: UPA00534 YE3430 90971dbf0cf952c27bf6ff6d43b7bc26 294 Gene3D G3DSA:3.60.110.10 1 285 2.7E-93 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 YE3430 90971dbf0cf952c27bf6ff6d43b7bc26 294 PANTHER PTHR23088:SF11 1 288 5.7E-155 T 22-04-2016 YE3052 7ce024716dc3e7b76302cbc164fc73fd 354 PANTHER PTHR11609:SF5 1 334 7.0E-109 T 22-04-2016 YE3052 7ce024716dc3e7b76302cbc164fc73fd 354 SUPERFAMILY SSF51246 278 352 1.26E-18 T 22-04-2016 IPR011054 Rudiment single hybrid motif YE3052 7ce024716dc3e7b76302cbc164fc73fd 354 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 3 325 32.733 T 22-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 YE3052 7ce024716dc3e7b76302cbc164fc73fd 354 Gene3D G3DSA:3.30.470.20 119 352 2.4E-79 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 YE3052 7ce024716dc3e7b76302cbc164fc73fd 354 Gene3D G3DSA:3.40.50.20 1 69 1.7E-23 T 22-04-2016 IPR016185 Pre-ATP-grasp domain YE3052 7ce024716dc3e7b76302cbc164fc73fd 354 SUPERFAMILY SSF52440 2 74 4.03E-15 T 22-04-2016 IPR016185 Pre-ATP-grasp domain YE3052 7ce024716dc3e7b76302cbc164fc73fd 354 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 4 327 8.8E-110 T 22-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 YE3052 7ce024716dc3e7b76302cbc164fc73fd 354 PANTHER PTHR11609 1 334 7.0E-109 T 22-04-2016 YE3052 7ce024716dc3e7b76302cbc164fc73fd 354 Pfam PF02222 ATP-grasp domain 88 254 1.8E-53 T 22-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 YE3052 7ce024716dc3e7b76302cbc164fc73fd 354 SUPERFAMILY SSF56059 79 274 4.09E-56 T 22-04-2016 YE0262 e7351dc79161f9645fbd99694f5b8308 260 PANTHER PTHR10060:SF13 1 260 1.1E-135 T 22-04-2016 YE0262 e7351dc79161f9645fbd99694f5b8308 260 Pfam PF01026 TatD related DNase 2 257 1.1E-65 T 22-04-2016 IPR001130 TatD family GO:0016788 YE0262 e7351dc79161f9645fbd99694f5b8308 260 Hamap MF_00901 Tat-linked quality control protein TatD [tatD]. 1 260 63.96 T 22-04-2016 IPR024918 3'-5' ssDNA/RNA exonuclease TatD GO:0008408 YE0262 e7351dc79161f9645fbd99694f5b8308 260 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 YE0262 e7351dc79161f9645fbd99694f5b8308 260 Gene3D G3DSA:3.20.20.140 1 259 1.0E-82 T 22-04-2016 YE0262 e7351dc79161f9645fbd99694f5b8308 260 PANTHER PTHR10060 1 260 1.1E-135 T 22-04-2016 IPR001130 TatD family GO:0016788 YE0262 e7351dc79161f9645fbd99694f5b8308 260 PIRSF PIRSF005902 1 260 9.4E-71 T 22-04-2016 IPR001130 TatD family GO:0016788 YE0262 e7351dc79161f9645fbd99694f5b8308 260 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 124 134 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 YE0262 e7351dc79161f9645fbd99694f5b8308 260 SUPERFAMILY SSF51556 1 259 2.68E-79 T 22-04-2016 IPR032466 Metal-dependent hydrolase YE3729 db567ce605158372533e075a2ddc8155 196 SUPERFAMILY SSF53697 2 191 4.85E-51 T 22-04-2016 YE3729 db567ce605158372533e075a2ddc8155 196 PANTHER PTHR30390:SF5 1 196 4.7E-133 T 22-04-2016 YE3729 db567ce605158372533e075a2ddc8155 196 PANTHER PTHR30390 1 196 4.7E-133 T 22-04-2016 YE3729 db567ce605158372533e075a2ddc8155 196 Hamap MF_01157 DnaA initiator-associating protein DiaA [diaA]. 1 196 61.413 T 22-04-2016 IPR023070 DnaA initiator-associating protein YE3729 db567ce605158372533e075a2ddc8155 196 Pfam PF13580 SIS domain 9 144 8.6E-33 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 YE3729 db567ce605158372533e075a2ddc8155 196 Gene3D G3DSA:3.40.50.10490 3 191 5.1E-55 T 22-04-2016 YE1667 5ed74bc07c7f8623fe0353786165710d 195 Pfam PF02661 Fic/DOC family 55 153 6.2E-17 T 22-04-2016 IPR003812 Fido domain YE1667 5ed74bc07c7f8623fe0353786165710d 195 PANTHER PTHR39560:SF1 1 194 1.7E-40 T 22-04-2016 YE1667 5ed74bc07c7f8623fe0353786165710d 195 Gene3D G3DSA:1.10.3290.10 12 194 6.8E-53 T 22-04-2016 IPR003812 Fido domain YE1667 5ed74bc07c7f8623fe0353786165710d 195 SUPERFAMILY SSF140931 43 194 6.02E-35 T 22-04-2016 IPR003812 Fido domain YE1667 5ed74bc07c7f8623fe0353786165710d 195 PANTHER PTHR39560 1 194 1.7E-40 T 22-04-2016 YE1564 105767a7fbb0514a125d53414cddb34c 466 Gene3D G3DSA:3.30.930.10 109 462 6.9E-113 T 22-04-2016 YE1564 105767a7fbb0514a125d53414cddb34c 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 460 6.7E-83 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YE1564 105767a7fbb0514a125d53414cddb34c 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 466 4.0E-209 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 YE1564 105767a7fbb0514a125d53414cddb34c 466 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 5.1E-12 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 YE1564 105767a7fbb0514a125d53414cddb34c 466 PANTHER PTHR22594:SF6 8 180 1.9E-252 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 YE1564 105767a7fbb0514a125d53414cddb34c 466 PANTHER PTHR22594:SF6 199 464 1.9E-252 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 YE1564 105767a7fbb0514a125d53414cddb34c 466 SUPERFAMILY SSF55681 99 464 5.38E-96 T 22-04-2016 YE1564 105767a7fbb0514a125d53414cddb34c 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 3.2E-14 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YE1564 105767a7fbb0514a125d53414cddb34c 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 3.2E-14 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YE1564 105767a7fbb0514a125d53414cddb34c 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 3.2E-14 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YE1564 105767a7fbb0514a125d53414cddb34c 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 3.2E-14 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YE1564 105767a7fbb0514a125d53414cddb34c 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 466 46.525 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 YE1564 105767a7fbb0514a125d53414cddb34c 466 PANTHER PTHR22594 8 180 1.9E-252 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YE1564 105767a7fbb0514a125d53414cddb34c 466 PANTHER PTHR22594 199 464 1.9E-252 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YE1564 105767a7fbb0514a125d53414cddb34c 466 SUPERFAMILY SSF50249 15 102 5.36E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE1564 105767a7fbb0514a125d53414cddb34c 466 Gene3D G3DSA:2.40.50.140 14 104 5.7E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE0001 a083122fe38b72f1dffaddfca69fb91e 146 Gene3D G3DSA:3.40.50.360 1 146 3.3E-37 T 22-04-2016 IPR029039 Flavoprotein-like domain YE0001 a083122fe38b72f1dffaddfca69fb91e 146 SUPERFAMILY SSF52218 1 146 7.38E-40 T 22-04-2016 IPR029039 Flavoprotein-like domain YE0001 a083122fe38b72f1dffaddfca69fb91e 146 PANTHER PTHR19384 1 146 6.1E-59 T 22-04-2016 YE0001 a083122fe38b72f1dffaddfca69fb91e 146 PRINTS PR00369 Flavodoxin signature 82 92 1.9E-7 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 YE0001 a083122fe38b72f1dffaddfca69fb91e 146 PRINTS PR00369 Flavodoxin signature 5 18 1.9E-7 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 YE0001 a083122fe38b72f1dffaddfca69fb91e 146 PRINTS PR00369 Flavodoxin signature 106 125 1.9E-7 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 YE0001 a083122fe38b72f1dffaddfca69fb91e 146 PRINTS PR00369 Flavodoxin signature 51 62 1.9E-7 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 YE0001 a083122fe38b72f1dffaddfca69fb91e 146 PANTHER PTHR19384:SF81 1 146 6.1E-59 T 22-04-2016 YE0001 a083122fe38b72f1dffaddfca69fb91e 146 Pfam PF00258 Flavodoxin 7 138 4.1E-26 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 YE3472 9f738ddf4b341cc264ea275d52a2d70c 117 SMART SM00418 8 86 7.4E-30 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YE3472 9f738ddf4b341cc264ea275d52a2d70c 117 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 32 50 - T 22-04-2016 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 YE3472 9f738ddf4b341cc264ea275d52a2d70c 117 Pfam PF01022 Bacterial regulatory protein, arsR family 15 61 5.5E-18 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YE3472 9f738ddf4b341cc264ea275d52a2d70c 117 Gene3D G3DSA:1.10.10.10 7 105 3.9E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3472 9f738ddf4b341cc264ea275d52a2d70c 117 SUPERFAMILY SSF46785 4 105 4.97E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3472 9f738ddf4b341cc264ea275d52a2d70c 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 58 73 9.1E-26 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YE3472 9f738ddf4b341cc264ea275d52a2d70c 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 9.1E-26 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YE3472 9f738ddf4b341cc264ea275d52a2d70c 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 30 41 9.1E-26 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YE3472 9f738ddf4b341cc264ea275d52a2d70c 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 43 58 9.1E-26 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YE3472 9f738ddf4b341cc264ea275d52a2d70c 117 PANTHER PTHR33154 8 99 1.3E-26 T 22-04-2016 YE1535 a77a3856eddd544f1bc7fd6da755e7d4 345 Pfam PF00710 Asparaginase, N-terminal 25 215 3.8E-61 T 22-04-2016 IPR027474 L-asparaginase, N-terminal YE1535 a77a3856eddd544f1bc7fd6da755e7d4 345 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 104 114 - T 22-04-2016 IPR027475 Asparaginase/glutaminase, active site 2 YE1535 a77a3856eddd544f1bc7fd6da755e7d4 345 PIRSF PIRSF500176 22 344 6.5E-83 T 22-04-2016 YE1535 a77a3856eddd544f1bc7fd6da755e7d4 345 SUPERFAMILY SSF53774 23 343 1.11E-106 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 YE1535 a77a3856eddd544f1bc7fd6da755e7d4 345 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 4 345 8.3E-154 T 22-04-2016 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 YE1535 a77a3856eddd544f1bc7fd6da755e7d4 345 Gene3D G3DSA:3.40.50.1170 23 221 9.5E-73 T 22-04-2016 IPR027474 L-asparaginase, N-terminal YE1535 a77a3856eddd544f1bc7fd6da755e7d4 345 PANTHER PTHR11707:SF29 23 342 4.7E-103 T 22-04-2016 YE1535 a77a3856eddd544f1bc7fd6da755e7d4 345 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 28 36 - T 22-04-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 YE1535 a77a3856eddd544f1bc7fd6da755e7d4 345 PANTHER PTHR11707 23 342 4.7E-103 T 22-04-2016 YE1535 a77a3856eddd544f1bc7fd6da755e7d4 345 PIRSF PIRSF001220 21 345 2.7E-94 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 YE1535 a77a3856eddd544f1bc7fd6da755e7d4 345 PRINTS PR00139 Asparaginase/glutaminase family signature 26 37 9.2E-23 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 YE1535 a77a3856eddd544f1bc7fd6da755e7d4 345 PRINTS PR00139 Asparaginase/glutaminase family signature 279 297 9.2E-23 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 YE1535 a77a3856eddd544f1bc7fd6da755e7d4 345 PRINTS PR00139 Asparaginase/glutaminase family signature 103 121 9.2E-23 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 YE1535 a77a3856eddd544f1bc7fd6da755e7d4 345 Gene3D G3DSA:3.40.50.40 232 343 2.1E-40 T 22-04-2016 IPR027473 L-asparaginase, C-terminal domain YE1535 a77a3856eddd544f1bc7fd6da755e7d4 345 SMART SM00870 25 339 8.7E-144 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 YE2817 2beb010fd8ee58d41e257e8b61029702 388 PANTHER PTHR30590 1 388 3.9E-146 T 22-04-2016 YE2817 2beb010fd8ee58d41e257e8b61029702 388 PANTHER PTHR30590:SF2 1 388 3.9E-146 T 22-04-2016 YE2817 2beb010fd8ee58d41e257e8b61029702 388 Pfam PF04235 Protein of unknown function (DUF418) 216 374 1.1E-45 T 22-04-2016 IPR007349 Domain of unknown function DUF418 YE1449 38c6a89f13494bad41cb7bf602263542 561 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 108 191 2.8E-39 T 22-04-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 YE1449 38c6a89f13494bad41cb7bf602263542 561 PANTHER PTHR30505 14 550 9.3E-274 T 22-04-2016 YE1449 38c6a89f13494bad41cb7bf602263542 561 Gene3D G3DSA:3.40.50.2300 103 207 5.1E-42 T 22-04-2016 YE1449 38c6a89f13494bad41cb7bf602263542 561 Gene3D G3DSA:3.40.50.2300 11 88 1.1E-5 T 22-04-2016 YE1449 38c6a89f13494bad41cb7bf602263542 561 PANTHER PTHR30505:SF0 14 550 9.3E-274 T 22-04-2016 YE1449 38c6a89f13494bad41cb7bf602263542 561 Pfam PF02378 Phosphotransferase system, EIIC 232 495 4.3E-15 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 YE1449 38c6a89f13494bad41cb7bf602263542 561 SUPERFAMILY SSF52794 106 206 1.1E-34 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 YE1449 38c6a89f13494bad41cb7bf602263542 561 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 218 551 5.5E-142 T 22-04-2016 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 YE1449 38c6a89f13494bad41cb7bf602263542 561 SUPERFAMILY SSF52794 4 88 1.07E-9 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 YE1449 38c6a89f13494bad41cb7bf602263542 561 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 109 195 2.2E-18 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 YE0770 3442a47a3827f0879ba173172beb7918 162 Pfam PF02542 YgbB family 1 156 1.6E-65 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 YE0770 3442a47a3827f0879ba173172beb7918 162 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 158 3.1E-69 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 YE0770 3442a47a3827f0879ba173172beb7918 162 Gene3D G3DSA:3.30.1330.50 1 159 7.3E-73 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 YE0770 3442a47a3827f0879ba173172beb7918 162 SUPERFAMILY SSF69765 1 159 1.44E-64 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 YE0770 3442a47a3827f0879ba173172beb7918 162 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 37 52 - T 22-04-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 YE0770 3442a47a3827f0879ba173172beb7918 162 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 158 36.646 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 YE0770 3442a47a3827f0879ba173172beb7918 162 PANTHER PTHR32125 1 162 1.8E-60 T 22-04-2016 YE2629 e02812ad615ee0b02835c3cef9f3d43e 264 Pfam PF13276 HTH-like domain 26 80 3.9E-8 T 22-04-2016 IPR025948 HTH-like domain YE2629 e02812ad615ee0b02835c3cef9f3d43e 264 PANTHER PTHR32552 25 250 1.2E-110 T 22-04-2016 YE2629 e02812ad615ee0b02835c3cef9f3d43e 264 SUPERFAMILY SSF53098 89 252 4.05E-40 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE2629 e02812ad615ee0b02835c3cef9f3d43e 264 PANTHER PTHR32552:SF26 25 250 1.2E-110 T 22-04-2016 YE2629 e02812ad615ee0b02835c3cef9f3d43e 264 Gene3D G3DSA:3.30.420.10 90 246 6.2E-44 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE2629 e02812ad615ee0b02835c3cef9f3d43e 264 Pfam PF13683 Integrase core domain 180 246 5.6E-28 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YE1196 cabb30c2a3c424a26a8c52c6dc7d072f 291 PANTHER PTHR30406 11 283 3.5E-156 T 22-04-2016 YE1196 cabb30c2a3c424a26a8c52c6dc7d072f 291 Gene3D G3DSA:1.10.3720.10 19 275 4.8E-48 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE1196 cabb30c2a3c424a26a8c52c6dc7d072f 291 PANTHER PTHR30406:SF1 11 283 3.5E-156 T 22-04-2016 YE1196 cabb30c2a3c424a26a8c52c6dc7d072f 291 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 19 276 8.6E-115 T 22-04-2016 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 YE1196 cabb30c2a3c424a26a8c52c6dc7d072f 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 267 3.9E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE1196 cabb30c2a3c424a26a8c52c6dc7d072f 291 SUPERFAMILY SSF161098 16 268 9.81E-54 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE1196 cabb30c2a3c424a26a8c52c6dc7d072f 291 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 15 275 6.9E-108 T 22-04-2016 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 YE1206 23359118968b9937a414d4296610b64e 575 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 7.1E-23 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 YE1206 23359118968b9937a414d4296610b64e 575 Gene3D G3DSA:3.20.20.60 256 571 2.3E-116 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YE1206 23359118968b9937a414d4296610b64e 575 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 YE1206 23359118968b9937a414d4296610b64e 575 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 1.7E-29 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 YE1206 23359118968b9937a414d4296610b64e 575 PIRSF PIRSF000732 1 574 1.7E-218 T 22-04-2016 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 YE1206 23359118968b9937a414d4296610b64e 575 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 252 541 1.8E-125 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 YE1206 23359118968b9937a414d4296610b64e 575 Gene3D G3DSA:3.50.30.10 133 255 1.7E-40 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 YE1206 23359118968b9937a414d4296610b64e 575 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 565 1.1E-258 T 22-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 YE1206 23359118968b9937a414d4296610b64e 575 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 YE1206 23359118968b9937a414d4296610b64e 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 4.5E-31 T 22-04-2016 YE1206 23359118968b9937a414d4296610b64e 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 4.5E-31 T 22-04-2016 YE1206 23359118968b9937a414d4296610b64e 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 4.5E-31 T 22-04-2016 YE1206 23359118968b9937a414d4296610b64e 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 4.5E-31 T 22-04-2016 YE1206 23359118968b9937a414d4296610b64e 575 SUPERFAMILY SSF51621 252 549 3.66E-110 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YE1206 23359118968b9937a414d4296610b64e 575 SUPERFAMILY SSF47831 23 143 1.2E-33 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 YE1206 23359118968b9937a414d4296610b64e 575 SUPERFAMILY SSF52009 125 246 5.23E-37 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 YE1206 23359118968b9937a414d4296610b64e 575 Gene3D G3DSA:1.10.274.10 23 132 2.0E-37 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 YE1206 23359118968b9937a414d4296610b64e 575 PANTHER PTHR22931 66 550 7.7E-219 T 22-04-2016 YE1350 b9dbf144671beb75e744687807ec5533 325 PANTHER PTHR11432:SF8 1 323 3.4E-244 T 22-04-2016 YE1350 b9dbf144671beb75e744687807ec5533 325 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 56 71 - T 22-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 YE1350 b9dbf144671beb75e744687807ec5533 325 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 211 224 - T 22-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 YE1350 b9dbf144671beb75e744687807ec5533 325 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 10 323 23.92 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 YE1350 b9dbf144671beb75e744687807ec5533 325 Pfam PF00146 NADH dehydrogenase 17 316 1.3E-120 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 YE1350 b9dbf144671beb75e744687807ec5533 325 PANTHER PTHR11432 1 323 3.4E-244 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 YE0047 f1a6fb4d924a15ad5f5a4663f5f9be65 207 SMART SM00072 3 187 4.7E-81 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit YE0047 f1a6fb4d924a15ad5f5a4663f5f9be65 207 Gene3D G3DSA:3.40.50.300 3 17 9.5E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0047 f1a6fb4d924a15ad5f5a4663f5f9be65 207 Gene3D G3DSA:3.40.50.300 88 204 9.5E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0047 f1a6fb4d924a15ad5f5a4663f5f9be65 207 PANTHER PTHR23117 1 204 5.0E-106 T 22-04-2016 YE0047 f1a6fb4d924a15ad5f5a4663f5f9be65 207 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 37.47 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 YE0047 f1a6fb4d924a15ad5f5a4663f5f9be65 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 184 3.6E-75 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 YE0047 f1a6fb4d924a15ad5f5a4663f5f9be65 207 SUPERFAMILY SSF52540 3 189 1.64E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0047 f1a6fb4d924a15ad5f5a4663f5f9be65 207 Gene3D G3DSA:3.30.63.10 41 87 4.7E-28 T 22-04-2016 YE0047 f1a6fb4d924a15ad5f5a4663f5f9be65 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 22-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 YE0047 f1a6fb4d924a15ad5f5a4663f5f9be65 207 Pfam PF00625 Guanylate kinase 5 186 1.3E-67 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit YE0047 f1a6fb4d924a15ad5f5a4663f5f9be65 207 Gene3D G3DSA:3.40.50.300 18 40 1.6E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0047 f1a6fb4d924a15ad5f5a4663f5f9be65 207 PANTHER PTHR23117:SF13 1 204 5.0E-106 T 22-04-2016 YE2176 3c3e1e50a0ba4ec50f0f78813b763093 793 Gene3D G3DSA:3.20.20.60 484 790 1.0E-102 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YE2176 3c3e1e50a0ba4ec50f0f78813b763093 793 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 23 349 4.4E-118 T 22-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 YE2176 3c3e1e50a0ba4ec50f0f78813b763093 793 Pfam PF00391 PEP-utilising enzyme, mobile domain 386 457 8.9E-27 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 YE2176 3c3e1e50a0ba4ec50f0f78813b763093 793 SUPERFAMILY SSF52009 350 468 9.55E-36 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 YE2176 3c3e1e50a0ba4ec50f0f78813b763093 793 Gene3D G3DSA:3.50.30.10 376 472 2.0E-36 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 YE2176 3c3e1e50a0ba4ec50f0f78813b763093 793 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 416 427 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 YE2176 3c3e1e50a0ba4ec50f0f78813b763093 793 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 484 787 5.5E-59 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 YE2176 3c3e1e50a0ba4ec50f0f78813b763093 793 PANTHER PTHR22931 287 789 0.0 T 22-04-2016 YE2176 3c3e1e50a0ba4ec50f0f78813b763093 793 PANTHER PTHR22931 10 271 0.0 T 22-04-2016 YE2176 3c3e1e50a0ba4ec50f0f78813b763093 793 PIRSF PIRSF000854 7 793 0.0 T 22-04-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 YE2176 3c3e1e50a0ba4ec50f0f78813b763093 793 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 696 714 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 YE2176 3c3e1e50a0ba4ec50f0f78813b763093 793 SUPERFAMILY SSF56059 10 386 3.06E-105 T 22-04-2016 YE2176 3c3e1e50a0ba4ec50f0f78813b763093 793 Gene3D G3DSA:3.30.1490.20 11 197 6.7E-67 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 YE2176 3c3e1e50a0ba4ec50f0f78813b763093 793 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 11 790 0.0 T 22-04-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 YE2176 3c3e1e50a0ba4ec50f0f78813b763093 793 SUPERFAMILY SSF51621 470 790 1.96E-95 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YE2176 3c3e1e50a0ba4ec50f0f78813b763093 793 PANTHER PTHR22931:SF7 287 789 0.0 T 22-04-2016 YE2176 3c3e1e50a0ba4ec50f0f78813b763093 793 PANTHER PTHR22931:SF7 10 271 0.0 T 22-04-2016 YE2176 3c3e1e50a0ba4ec50f0f78813b763093 793 Gene3D G3DSA:3.30.470.20 199 355 8.9E-61 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 YE2727 07cf47ffbe9c4a2542d955e2d99ede9b 271 TIGRFAM TIGR00861 MIP: MIP family channel proteins 11 249 1.1E-66 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 YE2727 07cf47ffbe9c4a2542d955e2d99ede9b 271 PANTHER PTHR19139 8 258 1.3E-85 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 YE2727 07cf47ffbe9c4a2542d955e2d99ede9b 271 SUPERFAMILY SSF81338 6 255 7.85E-76 T 22-04-2016 IPR023271 Aquaporin-like YE2727 07cf47ffbe9c4a2542d955e2d99ede9b 271 Gene3D G3DSA:1.20.1080.10 3 255 1.6E-83 T 22-04-2016 IPR023271 Aquaporin-like YE2727 07cf47ffbe9c4a2542d955e2d99ede9b 271 PRINTS PR00783 Major intrinsic protein family signature 232 252 1.7E-50 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 YE2727 07cf47ffbe9c4a2542d955e2d99ede9b 271 PRINTS PR00783 Major intrinsic protein family signature 7 26 1.7E-50 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 YE2727 07cf47ffbe9c4a2542d955e2d99ede9b 271 PRINTS PR00783 Major intrinsic protein family signature 182 204 1.7E-50 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 YE2727 07cf47ffbe9c4a2542d955e2d99ede9b 271 PRINTS PR00783 Major intrinsic protein family signature 46 70 1.7E-50 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 YE2727 07cf47ffbe9c4a2542d955e2d99ede9b 271 PRINTS PR00783 Major intrinsic protein family signature 149 167 1.7E-50 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 YE2727 07cf47ffbe9c4a2542d955e2d99ede9b 271 PRINTS PR00783 Major intrinsic protein family signature 83 102 1.7E-50 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 YE2727 07cf47ffbe9c4a2542d955e2d99ede9b 271 PANTHER PTHR19139:SF100 8 258 1.3E-85 T 22-04-2016 YE2727 07cf47ffbe9c4a2542d955e2d99ede9b 271 ProSitePatterns PS00221 MIP family signature. 64 72 - T 22-04-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 YE2727 07cf47ffbe9c4a2542d955e2d99ede9b 271 Pfam PF00230 Major intrinsic protein 6 249 2.6E-65 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 YE1340 2d6666f0de1bcacc9c4b5747bf273a32 197 SUPERFAMILY SSF109604 2 191 1.31E-44 T 22-04-2016 YE1340 2d6666f0de1bcacc9c4b5747bf273a32 197 Pfam PF13023 HD domain 9 161 1.9E-18 T 22-04-2016 IPR006674 HD domain YE1340 2d6666f0de1bcacc9c4b5747bf273a32 197 SMART SM00471 24 149 4.2E-7 T 22-04-2016 IPR003607 HD/PDEase domain YE1340 2d6666f0de1bcacc9c4b5747bf273a32 197 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 1 193 45.953 T 22-04-2016 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 YE1340 2d6666f0de1bcacc9c4b5747bf273a32 197 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 78 174 1.0E-48 T 22-04-2016 YE1340 2d6666f0de1bcacc9c4b5747bf273a32 197 Gene3D G3DSA:1.10.3210.10 2 192 1.8E-50 T 22-04-2016 IPR006674 HD domain YE1340 2d6666f0de1bcacc9c4b5747bf273a32 197 PANTHER PTHR11845 1 188 6.2E-49 T 22-04-2016 YE1875 941c153d60c4cc03b5ecd2ebc0f8f43e 455 PRINTS PR01036 Tetracycline resistance protein TetB signature 111 131 4.0E-9 T 22-04-2016 YE1875 941c153d60c4cc03b5ecd2ebc0f8f43e 455 PRINTS PR01036 Tetracycline resistance protein TetB signature 141 165 4.0E-9 T 22-04-2016 YE1875 941c153d60c4cc03b5ecd2ebc0f8f43e 455 PRINTS PR01036 Tetracycline resistance protein TetB signature 305 329 4.0E-9 T 22-04-2016 YE1875 941c153d60c4cc03b5ecd2ebc0f8f43e 455 PRINTS PR01036 Tetracycline resistance protein TetB signature 20 44 4.0E-9 T 22-04-2016 YE1875 941c153d60c4cc03b5ecd2ebc0f8f43e 455 PRINTS PR01036 Tetracycline resistance protein TetB signature 403 422 4.0E-9 T 22-04-2016 YE1875 941c153d60c4cc03b5ecd2ebc0f8f43e 455 Pfam PF07690 Major Facilitator Superfamily 21 412 2.4E-46 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YE1875 941c153d60c4cc03b5ecd2ebc0f8f43e 455 SUPERFAMILY SSF103473 251 450 7.19E-62 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE1875 941c153d60c4cc03b5ecd2ebc0f8f43e 455 SUPERFAMILY SSF103473 10 195 7.19E-62 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE1875 941c153d60c4cc03b5ecd2ebc0f8f43e 455 Gene3D G3DSA:1.20.1250.20 264 449 2.2E-18 T 22-04-2016 YE1875 941c153d60c4cc03b5ecd2ebc0f8f43e 455 Gene3D G3DSA:1.20.1250.20 14 194 2.8E-26 T 22-04-2016 YE1875 941c153d60c4cc03b5ecd2ebc0f8f43e 455 PANTHER PTHR23501:SF5 6 455 2.8E-165 T 22-04-2016 YE1875 941c153d60c4cc03b5ecd2ebc0f8f43e 455 PANTHER PTHR23501 6 455 2.8E-165 T 22-04-2016 YE3482 8d89388a31c4443306e08c9f8c4bc99c 880 SUPERFAMILY SSF52540 409 525 2.22E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3482 8d89388a31c4443306e08c9f8c4bc99c 880 SUPERFAMILY SSF52540 562 827 2.22E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3482 8d89388a31c4443306e08c9f8c4bc99c 880 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 2 260 5.8E-69 T 22-04-2016 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase YE3482 8d89388a31c4443306e08c9f8c4bc99c 880 Gene3D G3DSA:3.40.50.300 674 805 5.9E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3482 8d89388a31c4443306e08c9f8c4bc99c 880 Gene3D G3DSA:3.40.50.300 449 521 5.9E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3482 8d89388a31c4443306e08c9f8c4bc99c 880 TIGRFAM TIGR03744 traC_PFL_4706: conjugative transfer ATPase, PFL_4706 family 1 874 0.0 T 22-04-2016 IPR022303 Conjugative transfer ATPase YE2138 cb0975022d9345aa90c1d1c272a640e3 286 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 1 285 1.9E-129 T 22-04-2016 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 YE2138 cb0975022d9345aa90c1d1c272a640e3 286 SUPERFAMILY SSF53613 1 284 2.18E-75 T 22-04-2016 IPR029056 Ribokinase-like YE2138 cb0975022d9345aa90c1d1c272a640e3 286 Hamap MF_01639 Pyridoxamine kinase [pdxY]. 1 286 54.081 T 22-04-2016 IPR023685 Pyridoxal kinase PdxY GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 YE2138 cb0975022d9345aa90c1d1c272a640e3 286 PANTHER PTHR10534:SF0 1 286 1.3E-142 T 22-04-2016 YE2138 cb0975022d9345aa90c1d1c272a640e3 286 Gene3D G3DSA:3.40.1190.20 1 285 1.7E-90 T 22-04-2016 IPR029056 Ribokinase-like YE2138 cb0975022d9345aa90c1d1c272a640e3 286 PANTHER PTHR10534 1 286 1.3E-142 T 22-04-2016 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 YE2138 cb0975022d9345aa90c1d1c272a640e3 286 Pfam PF08543 Phosphomethylpyrimidine kinase 91 264 3.7E-16 T 22-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 YE3295 f47e5e3af3eabf9e022751e3b0ede760 281 Pfam PF14489 QueF-like protein 195 269 1.2E-27 T 22-04-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 YE3295 f47e5e3af3eabf9e022751e3b0ede760 281 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 21 131 2.4E-48 T 22-04-2016 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 YE3295 f47e5e3af3eabf9e022751e3b0ede760 281 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 281 165.376 T 22-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 YE3295 f47e5e3af3eabf9e022751e3b0ede760 281 Gene3D G3DSA:3.30.1130.10 21 137 2.0E-43 T 22-04-2016 YE3295 f47e5e3af3eabf9e022751e3b0ede760 281 PIRSF PIRSF004750 6 281 2.9E-124 T 22-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 YE3295 f47e5e3af3eabf9e022751e3b0ede760 281 PANTHER PTHR34354:SF1 2 281 3.5E-109 T 22-04-2016 YE3295 f47e5e3af3eabf9e022751e3b0ede760 281 TIGRFAM TIGR03138 QueF: queuine synthase 10 281 4.8E-127 T 22-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 YE3295 f47e5e3af3eabf9e022751e3b0ede760 281 Gene3D G3DSA:3.30.1130.10 145 279 3.7E-54 T 22-04-2016 YE3295 f47e5e3af3eabf9e022751e3b0ede760 281 SUPERFAMILY SSF55620 185 266 2.22E-9 T 22-04-2016 YE3295 f47e5e3af3eabf9e022751e3b0ede760 281 PANTHER PTHR34354 2 281 3.5E-109 T 22-04-2016 YE0890 08829330636b91cf695451020e01e059 243 Pfam PF13525 Outer membrane lipoprotein 28 236 2.9E-84 T 22-04-2016 YE0890 08829330636b91cf695451020e01e059 243 PANTHER PTHR37423 1 242 6.6E-119 T 22-04-2016 YE0890 08829330636b91cf695451020e01e059 243 Gene3D G3DSA:1.25.40.10 32 186 1.3E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YE0890 08829330636b91cf695451020e01e059 243 SUPERFAMILY SSF48452 27 119 1.42E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YE0890 08829330636b91cf695451020e01e059 243 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 4 243 48.228 T 22-04-2016 IPR017689 Outer membrane protein assembly factor BamD YE0890 08829330636b91cf695451020e01e059 243 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 5 241 3.3E-89 T 22-04-2016 IPR017689 Outer membrane protein assembly factor BamD YE2113 2692c7997300c73d828cd57a5b51564d 167 ProSitePatterns PS01265 Tpx family signature. 84 95 - T 22-04-2016 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 YE2113 2692c7997300c73d828cd57a5b51564d 167 PANTHER PTHR10681 1 167 5.3E-53 T 22-04-2016 YE2113 2692c7997300c73d828cd57a5b51564d 167 PANTHER PTHR10681:SF81 1 167 5.3E-53 T 22-04-2016 YE2113 2692c7997300c73d828cd57a5b51564d 167 Gene3D G3DSA:3.40.30.10 4 167 2.9E-46 T 22-04-2016 IPR012336 Thioredoxin-like fold YE2113 2692c7997300c73d828cd57a5b51564d 167 SUPERFAMILY SSF52833 4 164 3.02E-43 T 22-04-2016 IPR012336 Thioredoxin-like fold YE2113 2692c7997300c73d828cd57a5b51564d 167 Pfam PF08534 Redoxin 20 163 5.0E-28 T 22-04-2016 IPR013740 Redoxin GO:0016491 YE2113 2692c7997300c73d828cd57a5b51564d 167 Hamap MF_00269 Probable thiol peroxidase [tpx]. 4 167 39.774 T 22-04-2016 IPR002065 Putative thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 YE2213 7692df3bbb3e462257cfc17a13f0be22 396 Gene3D G3DSA:3.40.50.1100 176 391 1.6E-91 T 22-04-2016 YE2213 7692df3bbb3e462257cfc17a13f0be22 396 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 390 49.287 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 YE2213 7692df3bbb3e462257cfc17a13f0be22 396 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 79 93 - T 22-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 YE2213 7692df3bbb3e462257cfc17a13f0be22 396 Gene3D G3DSA:3.40.50.1100 96 175 8.1E-22 T 22-04-2016 YE2213 7692df3bbb3e462257cfc17a13f0be22 396 PIRSF PIRSF001413 1 396 1.5E-169 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 YE2213 7692df3bbb3e462257cfc17a13f0be22 396 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 7 388 5.1E-189 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 YE2213 7692df3bbb3e462257cfc17a13f0be22 396 PANTHER PTHR10314 6 395 1.8E-225 T 22-04-2016 YE2213 7692df3bbb3e462257cfc17a13f0be22 396 PANTHER PTHR10314:SF3 6 395 1.8E-225 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 YE2213 7692df3bbb3e462257cfc17a13f0be22 396 SUPERFAMILY SSF53686 4 389 6.29E-142 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YE2213 7692df3bbb3e462257cfc17a13f0be22 396 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 51 376 6.5E-50 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YE4049 e5983b2ff9564d8571c8aca27279f3e6 111 Hamap MF_01088 Universal stress protein B [uspB]. 1 107 36.513 T 22-04-2016 IPR019598 Universal stress protein B YE4049 e5983b2ff9564d8571c8aca27279f3e6 111 Pfam PF10625 Universal stress protein B (UspB) 1 105 7.4E-54 T 22-04-2016 IPR019598 Universal stress protein B YE1919 ba563997c9bd28b21c3b1e5844743318 96 Gene3D G3DSA:1.10.10.60 21 92 9.6E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE1919 ba563997c9bd28b21c3b1e5844743318 96 Pfam PF01527 Transposase 10 79 4.3E-21 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 YE1919 ba563997c9bd28b21c3b1e5844743318 96 PANTHER PTHR33609:SF1 10 95 9.4E-51 T 22-04-2016 YE1919 ba563997c9bd28b21c3b1e5844743318 96 SUPERFAMILY SSF46689 9 81 2.15E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE1919 ba563997c9bd28b21c3b1e5844743318 96 PANTHER PTHR33609 10 95 9.4E-51 T 22-04-2016 YE1581 9c4eb373f1d28528d0b7d8b4d6801e15 357 Gene3D G3DSA:2.40.160.20 11 222 1.9E-75 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YE1581 9c4eb373f1d28528d0b7d8b4d6801e15 357 PANTHER PTHR30128 1 357 8.7E-128 T 22-04-2016 YE1581 9c4eb373f1d28528d0b7d8b4d6801e15 357 Gene3D G3DSA:3.30.1330.60 223 345 1.5E-36 T 22-04-2016 IPR006665 OmpA-like domain YE1581 9c4eb373f1d28528d0b7d8b4d6801e15 357 PRINTS PR01022 Outer membrane protein A signature 290 309 1.2E-62 T 22-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 YE1581 9c4eb373f1d28528d0b7d8b4d6801e15 357 PRINTS PR01022 Outer membrane protein A signature 251 270 1.2E-62 T 22-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 YE1581 9c4eb373f1d28528d0b7d8b4d6801e15 357 PRINTS PR01022 Outer membrane protein A signature 324 337 1.2E-62 T 22-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 YE1581 9c4eb373f1d28528d0b7d8b4d6801e15 357 PRINTS PR01022 Outer membrane protein A signature 113 129 1.2E-62 T 22-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 YE1581 9c4eb373f1d28528d0b7d8b4d6801e15 357 PRINTS PR01022 Outer membrane protein A signature 176 190 1.2E-62 T 22-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 YE1581 9c4eb373f1d28528d0b7d8b4d6801e15 357 PRINTS PR01022 Outer membrane protein A signature 190 204 1.2E-62 T 22-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 YE1581 9c4eb373f1d28528d0b7d8b4d6801e15 357 PRINTS PR01022 Outer membrane protein A signature 222 237 1.2E-62 T 22-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 YE1581 9c4eb373f1d28528d0b7d8b4d6801e15 357 Pfam PF00691 OmpA family 233 326 6.6E-20 T 22-04-2016 IPR006665 OmpA-like domain YE1581 9c4eb373f1d28528d0b7d8b4d6801e15 357 ProSitePatterns PS01068 OmpA-like domain. 268 312 - T 22-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 YE1581 9c4eb373f1d28528d0b7d8b4d6801e15 357 PANTHER PTHR30128:SF16 1 357 8.7E-128 T 22-04-2016 YE1581 9c4eb373f1d28528d0b7d8b4d6801e15 357 SUPERFAMILY SSF103088 220 345 1.31E-32 T 22-04-2016 IPR006665 OmpA-like domain YE1581 9c4eb373f1d28528d0b7d8b4d6801e15 357 Pfam PF01389 OmpA-like transmembrane domain 23 205 2.6E-69 T 22-04-2016 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 YE1581 9c4eb373f1d28528d0b7d8b4d6801e15 357 SUPERFAMILY SSF56925 22 205 1.67E-39 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YE1581 9c4eb373f1d28528d0b7d8b4d6801e15 357 PRINTS PR01021 OMPA domain signature 266 281 1.8E-20 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YE1581 9c4eb373f1d28528d0b7d8b4d6801e15 357 PRINTS PR01021 OMPA domain signature 234 256 1.8E-20 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YE1581 9c4eb373f1d28528d0b7d8b4d6801e15 357 PRINTS PR01021 OMPA domain signature 281 297 1.8E-20 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YE1576 640cdadb5ffb4de0cd41b2e1a1610241 424 Gene3D G3DSA:3.40.47.10 274 422 5.1E-55 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YE1576 640cdadb5ffb4de0cd41b2e1a1610241 424 SMART SM00825 Beta-ketoacyl synthase 6 424 7.5E-14 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YE1576 640cdadb5ffb4de0cd41b2e1a1610241 424 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 420 1.7E-165 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 YE1576 640cdadb5ffb4de0cd41b2e1a1610241 424 PIRSF PIRSF000447 1 424 8.4E-163 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 YE1576 640cdadb5ffb4de0cd41b2e1a1610241 424 SUPERFAMILY SSF53901 225 422 3.15E-65 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YE1576 640cdadb5ffb4de0cd41b2e1a1610241 424 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 257 2.3E-58 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal YE1576 640cdadb5ffb4de0cd41b2e1a1610241 424 Gene3D G3DSA:3.40.47.10 2 270 1.3E-75 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YE1576 640cdadb5ffb4de0cd41b2e1a1610241 424 PANTHER PTHR11712 1 422 1.4E-179 T 22-04-2016 YE1576 640cdadb5ffb4de0cd41b2e1a1610241 424 SUPERFAMILY SSF53901 3 262 8.57E-72 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YE1576 640cdadb5ffb4de0cd41b2e1a1610241 424 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 265 378 2.5E-35 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal YE1576 640cdadb5ffb4de0cd41b2e1a1610241 424 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 164 180 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site YE2615 ba05855e0defb202ffff7ba2ab480c7b 600 Gene3D G3DSA:1.20.1560.10 16 326 1.1E-35 T 22-04-2016 YE2615 ba05855e0defb202ffff7ba2ab480c7b 600 PANTHER PTHR24222:SF24 2 596 0.0 T 22-04-2016 YE2615 ba05855e0defb202ffff7ba2ab480c7b 600 Gene3D G3DSA:3.40.50.300 341 573 3.5E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2615 ba05855e0defb202ffff7ba2ab480c7b 600 Pfam PF00005 ABC transporter 360 509 6.0E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE2615 ba05855e0defb202ffff7ba2ab480c7b 600 Pfam PF00664 ABC transporter transmembrane region 67 282 3.2E-21 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YE2615 ba05855e0defb202ffff7ba2ab480c7b 600 SUPERFAMILY SSF52540 337 579 9.84E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2615 ba05855e0defb202ffff7ba2ab480c7b 600 SUPERFAMILY SSF90123 16 331 1.57E-45 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YE2615 ba05855e0defb202ffff7ba2ab480c7b 600 PANTHER PTHR24222 2 596 0.0 T 22-04-2016 YE2615 ba05855e0defb202ffff7ba2ab480c7b 600 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE2615 ba05855e0defb202ffff7ba2ab480c7b 600 SMART SM00382 369 563 1.4E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain YE4079 ef4c2dd6d0d5a98f281669115a9b04a4 285 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 190 274 1.5E-25 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 YE4079 ef4c2dd6d0d5a98f281669115a9b04a4 285 PANTHER PTHR24220:SF493 1 280 1.4E-195 T 22-04-2016 YE4079 ef4c2dd6d0d5a98f281669115a9b04a4 285 SUPERFAMILY SSF52540 1 271 2.72E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE4079 ef4c2dd6d0d5a98f281669115a9b04a4 285 ProSitePatterns PS00211 ABC transporters family signature. 112 126 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE4079 ef4c2dd6d0d5a98f281669115a9b04a4 285 SMART SM00382 1 189 1.4E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain YE4079 ef4c2dd6d0d5a98f281669115a9b04a4 285 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 191 256 3.6E-18 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 YE4079 ef4c2dd6d0d5a98f281669115a9b04a4 285 Pfam PF00005 ABC transporter 2 139 1.4E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE4079 ef4c2dd6d0d5a98f281669115a9b04a4 285 PANTHER PTHR24220 1 280 1.4E-195 T 22-04-2016 YE4079 ef4c2dd6d0d5a98f281669115a9b04a4 285 Gene3D G3DSA:3.40.50.300 1 213 1.8E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2579 16b834e93b7f24c4cd68b014ad852af4 295 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 2 281 6.8E-118 T 22-04-2016 IPR022522 Flagellar motor stator, MotA YE2579 16b834e93b7f24c4cd68b014ad852af4 295 Pfam PF01618 MotA/TolQ/ExbB proton channel family 139 239 2.5E-11 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 YE2579 16b834e93b7f24c4cd68b014ad852af4 295 PANTHER PTHR30433:SF4 1 289 3.2E-191 T 22-04-2016 IPR022522 Flagellar motor stator, MotA YE2579 16b834e93b7f24c4cd68b014ad852af4 295 PANTHER PTHR30433 1 289 3.2E-191 T 22-04-2016 YE2579 16b834e93b7f24c4cd68b014ad852af4 295 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 22-04-2016 IPR000540 Flagellar motor protein MotA, conserved site YE2407 73d66ed0db4da404c630b9df7f5b44ea 1626 PANTHER PTHR32093 1 175 4.9E-40 T 22-04-2016 YE2407 73d66ed0db4da404c630b9df7f5b44ea 1626 Gene3D G3DSA:2.160.20.10 40 332 1.5E-60 T 22-04-2016 IPR012334 Pectin lyase fold YE2407 73d66ed0db4da404c630b9df7f5b44ea 1626 Pfam PF05860 haemagglutination activity domain 51 166 3.8E-22 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal YE2407 73d66ed0db4da404c630b9df7f5b44ea 1626 SUPERFAMILY SSF51126 44 320 2.79E-38 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YE2407 73d66ed0db4da404c630b9df7f5b44ea 1626 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 68 151 5.2E-13 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal YE2407 73d66ed0db4da404c630b9df7f5b44ea 1626 SMART SM00912 50 170 9.8E-35 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal YE2407 73d66ed0db4da404c630b9df7f5b44ea 1626 Pfam PF13332 Haemagluttinin repeat 936 1097 1.3E-11 T 22-04-2016 IPR025157 Haemagluttinin repeat YE2407 73d66ed0db4da404c630b9df7f5b44ea 1626 Pfam PF13332 Haemagluttinin repeat 635 701 0.0014 T 22-04-2016 IPR025157 Haemagluttinin repeat YE2407 73d66ed0db4da404c630b9df7f5b44ea 1626 Pfam PF13332 Haemagluttinin repeat 406 622 7.3E-5 T 22-04-2016 IPR025157 Haemagluttinin repeat YE2407 73d66ed0db4da404c630b9df7f5b44ea 1626 Pfam PF13332 Haemagluttinin repeat 821 899 3.7E-4 T 22-04-2016 IPR025157 Haemagluttinin repeat YE2407 73d66ed0db4da404c630b9df7f5b44ea 1626 Pfam PF13332 Haemagluttinin repeat 1221 1385 5.2E-17 T 22-04-2016 IPR025157 Haemagluttinin repeat YE0682 71261a55fe8a7a4974b350d85bdb806d 128 Pfam PF00293 NUDIX domain 6 124 1.4E-21 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 YE0682 71261a55fe8a7a4974b350d85bdb806d 128 Gene3D G3DSA:3.90.79.10 4 126 1.6E-35 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YE0682 71261a55fe8a7a4974b350d85bdb806d 128 PRINTS PR00502 NUDIX hydrolase family signature 33 47 1.2E-9 T 22-04-2016 IPR020476 NUDIX hydrolase YE0682 71261a55fe8a7a4974b350d85bdb806d 128 PRINTS PR00502 NUDIX hydrolase family signature 47 62 1.2E-9 T 22-04-2016 IPR020476 NUDIX hydrolase YE0682 71261a55fe8a7a4974b350d85bdb806d 128 SUPERFAMILY SSF55811 2 126 1.62E-37 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YE0682 71261a55fe8a7a4974b350d85bdb806d 128 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 YE0682 71261a55fe8a7a4974b350d85bdb806d 128 PANTHER PTHR22769 2 126 1.6E-71 T 22-04-2016 YE0682 71261a55fe8a7a4974b350d85bdb806d 128 TIGRFAM TIGR00586 mutt: mutator mutT protein 2 126 4.9E-50 T 22-04-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 YE0682 71261a55fe8a7a4974b350d85bdb806d 128 PANTHER PTHR22769:SF36 2 126 1.6E-71 T 22-04-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 YE0682 71261a55fe8a7a4974b350d85bdb806d 128 PRINTS PR01401 Mutator MutT protein signature 77 90 2.4E-11 T 22-04-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 YE0682 71261a55fe8a7a4974b350d85bdb806d 128 PRINTS PR01401 Mutator MutT protein signature 2 23 2.4E-11 T 22-04-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 YE2442 8d602115bc0985010aafe100e61e9a19 218 Pfam PF04391 Protein of unknown function (DUF533) 32 209 7.5E-51 T 22-04-2016 IPR007486 Inner membrane protein YebE YE2442 8d602115bc0985010aafe100e61e9a19 218 SUPERFAMILY SSF158682 69 210 6.54E-19 T 22-04-2016 IPR029024 TerB-like YE2442 8d602115bc0985010aafe100e61e9a19 218 Gene3D G3DSA:1.10.3680.10 81 209 1.1E-14 T 22-04-2016 IPR029024 TerB-like YE2442 8d602115bc0985010aafe100e61e9a19 218 Gene3D G3DSA:1.10.3680.10 35 49 1.1E-14 T 22-04-2016 IPR029024 TerB-like YE3920 6217cbf14a2732c102ed6fdcb7193770 274 SUPERFAMILY SSF50104 127 269 1.08E-59 T 22-04-2016 IPR008991 Translation protein SH3-like domain YE3920 6217cbf14a2732c102ed6fdcb7193770 274 SMART SM01383 42 118 3.6E-48 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3920 6217cbf14a2732c102ed6fdcb7193770 274 Gene3D G3DSA:2.40.50.140 1 114 3.5E-51 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE3920 6217cbf14a2732c102ed6fdcb7193770 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 249 2.6E-55 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 YE3920 6217cbf14a2732c102ed6fdcb7193770 274 SMART SM01382 124 251 4.1E-90 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 YE3920 6217cbf14a2732c102ed6fdcb7193770 274 Gene3D G3DSA:4.10.950.10 196 272 5.8E-35 T 22-04-2016 IPR014726 Ribosomal protein L2, domain 3 YE3920 6217cbf14a2732c102ed6fdcb7193770 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 272 1.1E-131 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 YE3920 6217cbf14a2732c102ed6fdcb7193770 274 PANTHER PTHR13691 1 273 6.9E-150 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3920 6217cbf14a2732c102ed6fdcb7193770 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 3.8E-34 T 22-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3920 6217cbf14a2732c102ed6fdcb7193770 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 22-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 YE3920 6217cbf14a2732c102ed6fdcb7193770 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 272 47.334 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 YE3920 6217cbf14a2732c102ed6fdcb7193770 274 SUPERFAMILY SSF50249 2 125 1.1E-50 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE3920 6217cbf14a2732c102ed6fdcb7193770 274 PIRSF PIRSF002158 12 274 2.4E-100 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3920 6217cbf14a2732c102ed6fdcb7193770 274 Gene3D G3DSA:2.30.30.30 119 195 1.8E-33 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 YE0110 565a2fd799ede53726702e8f6e5120c2 105 SUPERFAMILY SSF47598 2 105 3.78E-57 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 YE0110 565a2fd799ede53726702e8f6e5120c2 105 Gene3D G3DSA:1.10.140.10 2 105 1.7E-64 T 22-04-2016 IPR023453 Methionine repressor MetJ domain YE0110 565a2fd799ede53726702e8f6e5120c2 105 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 8.0E-49 T 22-04-2016 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 YE0110 565a2fd799ede53726702e8f6e5120c2 105 Pfam PF01340 Met Apo-repressor, MetJ 3 99 5.1E-58 T 22-04-2016 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 YE0110 565a2fd799ede53726702e8f6e5120c2 105 Hamap MF_00744 Met repressor [metJ]. 1 105 40.23 T 22-04-2016 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 YE1302 70fc9936275621132d179c8f222eb5b7 166 Pfam PF00578 AhpC/TSA family 38 139 4.9E-15 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 YE1302 70fc9936275621132d179c8f222eb5b7 166 PANTHER PTHR10681:SF106 11 153 5.6E-26 T 22-04-2016 YE1302 70fc9936275621132d179c8f222eb5b7 166 Gene3D G3DSA:3.40.30.10 14 154 2.3E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold YE1302 70fc9936275621132d179c8f222eb5b7 166 SUPERFAMILY SSF52833 36 157 2.05E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold YE1302 70fc9936275621132d179c8f222eb5b7 166 PANTHER PTHR10681 11 153 5.6E-26 T 22-04-2016 YE2883 a57839c486f5f6400175d9481767a577 570 Gene3D G3DSA:3.30.465.10 106 268 7.1E-85 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 YE2883 a57839c486f5f6400175d9481767a577 570 Gene3D G3DSA:3.30.70.610 269 337 9.0E-23 T 22-04-2016 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 YE2883 a57839c486f5f6400175d9481767a577 570 Gene3D G3DSA:3.30.70.610 338 434 3.9E-24 T 22-04-2016 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 YE2883 a57839c486f5f6400175d9481767a577 570 PIRSF PIRSF000101 4 569 1.7E-291 T 22-04-2016 IPR012256 D-lactate dehydrogenase GO:0004457|GO:0005887|GO:0006089|GO:0050660|GO:0051287 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 YE2883 a57839c486f5f6400175d9481767a577 570 Pfam PF01565 FAD binding domain 47 167 4.2E-7 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 YE2883 a57839c486f5f6400175d9481767a577 570 PANTHER PTHR11748 242 317 6.4E-62 T 22-04-2016 YE2883 a57839c486f5f6400175d9481767a577 570 PANTHER PTHR11748 10 191 6.4E-62 T 22-04-2016 YE2883 a57839c486f5f6400175d9481767a577 570 Gene3D G3DSA:3.30.43.10 4 104 8.2E-8 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 YE2883 a57839c486f5f6400175d9481767a577 570 PANTHER PTHR11748:SF82 242 317 6.4E-62 T 22-04-2016 YE2883 a57839c486f5f6400175d9481767a577 570 PANTHER PTHR11748:SF82 10 191 6.4E-62 T 22-04-2016 YE2883 a57839c486f5f6400175d9481767a577 570 SUPERFAMILY SSF56176 10 271 5.12E-71 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 YE2883 a57839c486f5f6400175d9481767a577 570 Gene3D G3DSA:3.30.1370.20 435 519 7.2E-45 T 22-04-2016 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 YE2883 a57839c486f5f6400175d9481767a577 570 SUPERFAMILY SSF55103 275 567 5.23E-116 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 YE2883 a57839c486f5f6400175d9481767a577 570 Pfam PF09330 D-lactate dehydrogenase, membrane binding 278 567 1.3E-146 T 22-04-2016 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 YE1707 69e0e910296d4ffe39998db0f1d3e2c5 434 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 338 2.7E-65 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE1707 69e0e910296d4ffe39998db0f1d3e2c5 434 PANTHER PTHR22912 171 192 2.7E-25 T 22-04-2016 YE1707 69e0e910296d4ffe39998db0f1d3e2c5 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 172 197 1.0E-7 T 22-04-2016 YE1707 69e0e910296d4ffe39998db0f1d3e2c5 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 1.0E-7 T 22-04-2016 YE1707 69e0e910296d4ffe39998db0f1d3e2c5 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 310 317 1.0E-7 T 22-04-2016 YE1707 69e0e910296d4ffe39998db0f1d3e2c5 434 PANTHER PTHR22912:SF140 5 154 2.7E-25 T 22-04-2016 YE1707 69e0e910296d4ffe39998db0f1d3e2c5 434 PANTHER PTHR22912 208 317 2.7E-25 T 22-04-2016 YE1707 69e0e910296d4ffe39998db0f1d3e2c5 434 PANTHER PTHR22912 5 154 2.7E-25 T 22-04-2016 YE1707 69e0e910296d4ffe39998db0f1d3e2c5 434 Gene3D G3DSA:3.50.50.60 5 119 3.3E-20 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE1707 69e0e910296d4ffe39998db0f1d3e2c5 434 SUPERFAMILY SSF51905 3 345 1.02E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE1707 69e0e910296d4ffe39998db0f1d3e2c5 434 PANTHER PTHR22912:SF140 208 317 2.7E-25 T 22-04-2016 YE1707 69e0e910296d4ffe39998db0f1d3e2c5 434 PANTHER PTHR22912:SF140 171 192 2.7E-25 T 22-04-2016 YE1707 69e0e910296d4ffe39998db0f1d3e2c5 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 295 317 9.8E-16 T 22-04-2016 YE1707 69e0e910296d4ffe39998db0f1d3e2c5 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 115 133 9.8E-16 T 22-04-2016 YE1707 69e0e910296d4ffe39998db0f1d3e2c5 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 9.8E-16 T 22-04-2016 YE1707 69e0e910296d4ffe39998db0f1d3e2c5 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 172 190 9.8E-16 T 22-04-2016 YE1707 69e0e910296d4ffe39998db0f1d3e2c5 434 Gene3D G3DSA:3.50.50.60 120 346 1.8E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE2597 2f49b9a565fa1ad8eab2375fd7f205b9 152 PANTHER PTHR30154 1 145 1.3E-89 T 22-04-2016 YE2597 2f49b9a565fa1ad8eab2375fd7f205b9 152 Gene3D G3DSA:1.10.10.10 1 51 2.2E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2597 2f49b9a565fa1ad8eab2375fd7f205b9 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 3.3E-11 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 YE2597 2f49b9a565fa1ad8eab2375fd7f205b9 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 3.3E-11 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 YE2597 2f49b9a565fa1ad8eab2375fd7f205b9 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 3.3E-11 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 YE2597 2f49b9a565fa1ad8eab2375fd7f205b9 152 Pfam PF01037 Lrp/AsnC ligand binding domain 67 132 1.8E-11 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain YE2597 2f49b9a565fa1ad8eab2375fd7f205b9 152 SUPERFAMILY SSF46785 1 61 3.95E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2597 2f49b9a565fa1ad8eab2375fd7f205b9 152 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 1.5E-13 T 22-04-2016 YE2597 2f49b9a565fa1ad8eab2375fd7f205b9 152 PANTHER PTHR30154:SF14 1 145 1.3E-89 T 22-04-2016 YE2597 2f49b9a565fa1ad8eab2375fd7f205b9 152 SMART SM00344 1 107 6.4E-25 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 YE2597 2f49b9a565fa1ad8eab2375fd7f205b9 152 Gene3D G3DSA:3.30.70.920 54 128 9.8E-14 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain YE2597 2f49b9a565fa1ad8eab2375fd7f205b9 152 SUPERFAMILY SSF54909 62 135 1.55E-13 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel YE3998 149cc29a8e4fa560d5bd1cc45bcc308c 771 Pfam PF07670 Nucleoside recognition 354 444 8.6E-13 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 YE3998 149cc29a8e4fa560d5bd1cc45bcc308c 771 Pfam PF07670 Nucleoside recognition 513 690 4.7E-37 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 YE3998 149cc29a8e4fa560d5bd1cc45bcc308c 771 Pfam PF07664 Ferrous iron transport protein B C terminus 456 508 7.6E-22 T 22-04-2016 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 YE3998 149cc29a8e4fa560d5bd1cc45bcc308c 771 PANTHER PTHR11649 659 726 1.1E-289 T 22-04-2016 YE3998 149cc29a8e4fa560d5bd1cc45bcc308c 771 PANTHER PTHR11649 1 150 1.1E-289 T 22-04-2016 YE3998 149cc29a8e4fa560d5bd1cc45bcc308c 771 PANTHER PTHR11649 263 612 1.1E-289 T 22-04-2016 YE3998 149cc29a8e4fa560d5bd1cc45bcc308c 771 PANTHER PTHR11649:SF37 659 726 1.1E-289 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 YE3998 149cc29a8e4fa560d5bd1cc45bcc308c 771 PANTHER PTHR11649:SF37 1 150 1.1E-289 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 YE3998 149cc29a8e4fa560d5bd1cc45bcc308c 771 PANTHER PTHR11649:SF37 263 612 1.1E-289 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 YE3998 149cc29a8e4fa560d5bd1cc45bcc308c 771 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 10 688 1.2E-227 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 YE3998 149cc29a8e4fa560d5bd1cc45bcc308c 771 SUPERFAMILY SSF52540 4 182 1.15E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3998 149cc29a8e4fa560d5bd1cc45bcc308c 771 Gene3D G3DSA:3.40.50.300 3 168 3.1E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3998 149cc29a8e4fa560d5bd1cc45bcc308c 771 Pfam PF02421 Ferrous iron transport protein B 5 163 3.1E-65 T 22-04-2016 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 YE4159 0263ea65f8d936b699f4c27eea6c94b7 326 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 148 176 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YE4159 0263ea65f8d936b699f4c27eea6c94b7 326 PANTHER PTHR10996 1 325 3.6E-154 T 22-04-2016 YE4159 0263ea65f8d936b699f4c27eea6c94b7 326 Gene3D G3DSA:3.40.50.720 114 287 4.5E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain YE4159 0263ea65f8d936b699f4c27eea6c94b7 326 Gene3D G3DSA:3.40.50.720 2 113 5.2E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain YE4159 0263ea65f8d936b699f4c27eea6c94b7 326 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 287 8.1E-60 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 YE4159 0263ea65f8d936b699f4c27eea6c94b7 326 SUPERFAMILY SSF52283 1 133 7.37E-30 T 22-04-2016 YE4159 0263ea65f8d936b699f4c27eea6c94b7 326 SUPERFAMILY SSF51735 100 288 9.54E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain YE4159 0263ea65f8d936b699f4c27eea6c94b7 326 PANTHER PTHR10996:SF118 1 325 3.6E-154 T 22-04-2016 YE4159 0263ea65f8d936b699f4c27eea6c94b7 326 Hamap MF_01667 Glyoxylate/hydroxypyruvate reductase B [ghrB]. 1 324 67.344 T 22-04-2016 IPR023756 Glyoxylate/hydroxypyruvate reductase B GO:0016618|GO:0030267|GO:0055114 KEGG: 00260+1.1.1.81|KEGG: 00620+1.1.1.79|KEGG: 00630+1.1.1.79+1.1.1.81|MetaCyc: PWY-1622 YE4159 0263ea65f8d936b699f4c27eea6c94b7 326 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 226 242 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YE4159 0263ea65f8d936b699f4c27eea6c94b7 326 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 319 7.7E-30 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 YE0761 ce211c205483f6cbd816ebef03ea294b 472 PIRSF PIRSF036426 1 465 1.1E-204 T 22-04-2016 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YE0761 ce211c205483f6cbd816ebef03ea294b 472 Pfam PF10414 Sirohaem synthase dimerisation region 150 205 9.1E-22 T 22-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YE0761 ce211c205483f6cbd816ebef03ea294b 472 PANTHER PTHR21091:SF16 164 426 3.4E-85 T 22-04-2016 YE0761 ce211c205483f6cbd816ebef03ea294b 472 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 215 448 1.2E-93 T 22-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YE0761 ce211c205483f6cbd816ebef03ea294b 472 Gene3D G3DSA:3.40.1010.10 214 330 4.8E-48 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 YE0761 ce211c205483f6cbd816ebef03ea294b 472 SUPERFAMILY SSF53790 211 456 5.76E-81 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 YE0761 ce211c205483f6cbd816ebef03ea294b 472 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 295 328 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YE0761 ce211c205483f6cbd816ebef03ea294b 472 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 220 234 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YE0761 ce211c205483f6cbd816ebef03ea294b 472 Gene3D G3DSA:3.30.160.110 113 148 9.1E-19 T 22-04-2016 YE0761 ce211c205483f6cbd816ebef03ea294b 472 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 206 2.1E-79 T 22-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YE0761 ce211c205483f6cbd816ebef03ea294b 472 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 217 426 2.8E-52 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 YE0761 ce211c205483f6cbd816ebef03ea294b 472 Gene3D G3DSA:3.40.50.720 2 112 7.2E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain YE0761 ce211c205483f6cbd816ebef03ea294b 472 Pfam PF13241 Putative NAD(P)-binding 6 115 1.1E-28 T 22-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YE0761 ce211c205483f6cbd816ebef03ea294b 472 Pfam PF14824 Sirohaem biosynthesis protein central 119 145 2.5E-7 T 22-04-2016 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YE0761 ce211c205483f6cbd816ebef03ea294b 472 PANTHER PTHR21091 164 426 3.4E-85 T 22-04-2016 YE0761 ce211c205483f6cbd816ebef03ea294b 472 SUPERFAMILY SSF75615 114 210 1.83E-28 T 22-04-2016 YE0761 ce211c205483f6cbd816ebef03ea294b 472 Gene3D G3DSA:3.30.950.10 331 462 1.8E-48 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 YE0761 ce211c205483f6cbd816ebef03ea294b 472 Hamap MF_01646 Siroheme synthase [cysG]. 1 457 52.655 T 22-04-2016 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YE0761 ce211c205483f6cbd816ebef03ea294b 472 Gene3D G3DSA:1.10.8.210 150 209 2.0E-23 T 22-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YE0761 ce211c205483f6cbd816ebef03ea294b 472 SUPERFAMILY SSF51735 2 113 2.19E-26 T 22-04-2016 IPR016040 NAD(P)-binding domain YE1061 02766ecdbfd1afac073873ff0a940a44 616 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 615 2.8E-271 T 22-04-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 YE1061 02766ecdbfd1afac073873ff0a940a44 616 Gene3D G3DSA:2.60.34.10 387 527 1.1E-53 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain YE1061 02766ecdbfd1afac073873ff0a940a44 616 Pfam PF00012 Hsp70 protein 22 600 5.4E-197 T 22-04-2016 IPR013126 Heat shock protein 70 family YE1061 02766ecdbfd1afac073873ff0a940a44 616 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site YE1061 02766ecdbfd1afac073873ff0a940a44 616 PANTHER PTHR19375:SF176 19 606 0.0 T 22-04-2016 YE1061 02766ecdbfd1afac073873ff0a940a44 616 PRINTS PR00301 70kDa heat shock protein signature 466 482 1.5E-52 T 22-04-2016 IPR013126 Heat shock protein 70 family YE1061 02766ecdbfd1afac073873ff0a940a44 616 PRINTS PR00301 70kDa heat shock protein signature 329 345 1.5E-52 T 22-04-2016 IPR013126 Heat shock protein 70 family YE1061 02766ecdbfd1afac073873ff0a940a44 616 PRINTS PR00301 70kDa heat shock protein signature 152 172 1.5E-52 T 22-04-2016 IPR013126 Heat shock protein 70 family YE1061 02766ecdbfd1afac073873ff0a940a44 616 PRINTS PR00301 70kDa heat shock protein signature 211 221 1.5E-52 T 22-04-2016 IPR013126 Heat shock protein 70 family YE1061 02766ecdbfd1afac073873ff0a940a44 616 PRINTS PR00301 70kDa heat shock protein signature 20 33 1.5E-52 T 22-04-2016 IPR013126 Heat shock protein 70 family YE1061 02766ecdbfd1afac073873ff0a940a44 616 PRINTS PR00301 70kDa heat shock protein signature 360 380 1.5E-52 T 22-04-2016 IPR013126 Heat shock protein 70 family YE1061 02766ecdbfd1afac073873ff0a940a44 616 PRINTS PR00301 70kDa heat shock protein signature 385 404 1.5E-52 T 22-04-2016 IPR013126 Heat shock protein 70 family YE1061 02766ecdbfd1afac073873ff0a940a44 616 PANTHER PTHR19375 19 606 0.0 T 22-04-2016 YE1061 02766ecdbfd1afac073873ff0a940a44 616 Gene3D G3DSA:3.30.30.30 88 127 6.4E-8 T 22-04-2016 YE1061 02766ecdbfd1afac073873ff0a940a44 616 SUPERFAMILY SSF100934 504 615 7.26E-38 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain YE1061 02766ecdbfd1afac073873ff0a940a44 616 Gene3D G3DSA:1.20.1270.10 528 615 6.0E-32 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain YE1061 02766ecdbfd1afac073873ff0a940a44 616 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site YE1061 02766ecdbfd1afac073873ff0a940a44 616 Gene3D G3DSA:3.30.420.40 20 87 4.8E-54 T 22-04-2016 YE1061 02766ecdbfd1afac073873ff0a940a44 616 Gene3D G3DSA:3.30.420.40 128 200 4.8E-54 T 22-04-2016 YE1061 02766ecdbfd1afac073873ff0a940a44 616 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 616 45.756 T 22-04-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 YE1061 02766ecdbfd1afac073873ff0a940a44 616 Gene3D G3DSA:3.90.640.10 239 310 8.4E-10 T 22-04-2016 YE1061 02766ecdbfd1afac073873ff0a940a44 616 SUPERFAMILY SSF100920 384 534 7.72E-50 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain YE1061 02766ecdbfd1afac073873ff0a940a44 616 Gene3D G3DSA:3.30.420.40 201 238 8.5E-32 T 22-04-2016 YE1061 02766ecdbfd1afac073873ff0a940a44 616 Gene3D G3DSA:3.30.420.40 314 356 8.5E-32 T 22-04-2016 YE1061 02766ecdbfd1afac073873ff0a940a44 616 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 332 346 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site YE1061 02766ecdbfd1afac073873ff0a940a44 616 SUPERFAMILY SSF53067 200 377 4.57E-51 T 22-04-2016 YE1061 02766ecdbfd1afac073873ff0a940a44 616 SUPERFAMILY SSF53067 20 196 2.75E-50 T 22-04-2016 YE0673 1b0bd445ecf00369400ef019335272c6 491 Pfam PF08245 Mur ligase middle domain 124 304 2.8E-27 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YE0673 1b0bd445ecf00369400ef019335272c6 491 Gene3D G3DSA:3.90.190.20 326 477 2.5E-56 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YE0673 1b0bd445ecf00369400ef019335272c6 491 PANTHER PTHR23135:SF5 14 469 2.7E-234 T 22-04-2016 YE0673 1b0bd445ecf00369400ef019335272c6 491 Gene3D G3DSA:3.40.1190.10 108 325 4.5E-85 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YE0673 1b0bd445ecf00369400ef019335272c6 491 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 19 481 43.622 T 22-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YE0673 1b0bd445ecf00369400ef019335272c6 491 SUPERFAMILY SSF53244 323 477 1.1E-46 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YE0673 1b0bd445ecf00369400ef019335272c6 491 SUPERFAMILY SSF51984 20 106 2.88E-29 T 22-04-2016 YE0673 1b0bd445ecf00369400ef019335272c6 491 PANTHER PTHR23135 14 469 2.7E-234 T 22-04-2016 YE0673 1b0bd445ecf00369400ef019335272c6 491 SUPERFAMILY SSF53623 105 322 8.77E-74 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YE0673 1b0bd445ecf00369400ef019335272c6 491 Pfam PF01225 Mur ligase family, catalytic domain 21 118 3.5E-29 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 YE0673 1b0bd445ecf00369400ef019335272c6 491 Pfam PF02875 Mur ligase family, glutamate ligase domain 333 418 3.8E-21 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YE0673 1b0bd445ecf00369400ef019335272c6 491 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 21 475 1.0E-183 T 22-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YE0673 1b0bd445ecf00369400ef019335272c6 491 Gene3D G3DSA:3.40.50.720 20 107 1.1E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2705 ba6571d656ac5f5644318e2900934eb6 200 SUPERFAMILY SSF46894 122 188 1.09E-13 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YE2705 ba6571d656ac5f5644318e2900934eb6 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 144 160 1.7E-6 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE2705 ba6571d656ac5f5644318e2900934eb6 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 130 144 1.7E-6 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE2705 ba6571d656ac5f5644318e2900934eb6 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 172 1.7E-6 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE2705 ba6571d656ac5f5644318e2900934eb6 200 Pfam PF00196 Bacterial regulatory proteins, luxR family 129 184 2.7E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE2705 ba6571d656ac5f5644318e2900934eb6 200 Gene3D G3DSA:1.10.10.10 126 188 6.8E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2705 ba6571d656ac5f5644318e2900934eb6 200 SMART SM00421 127 184 3.6E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE3091 44c630b1aebfbcbc388ef0d63ef081af 201 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 22-04-2016 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 YE3091 44c630b1aebfbcbc388ef0d63ef081af 201 TIGRFAM TIGR00615 recR: recombination protein RecR 2 197 4.6E-80 T 22-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 YE3091 44c630b1aebfbcbc388ef0d63ef081af 201 PANTHER PTHR30446 1 201 1.2E-119 T 22-04-2016 YE3091 44c630b1aebfbcbc388ef0d63ef081af 201 Pfam PF13662 Toprim domain 82 172 4.9E-21 T 22-04-2016 IPR006171 Toprim domain YE3091 44c630b1aebfbcbc388ef0d63ef081af 201 PANTHER PTHR30446:SF0 1 201 1.2E-119 T 22-04-2016 YE3091 44c630b1aebfbcbc388ef0d63ef081af 201 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 101.422 T 22-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 YE3091 44c630b1aebfbcbc388ef0d63ef081af 201 SMART SM00493 81 166 2.6E-17 T 22-04-2016 IPR006171 Toprim domain YE3091 44c630b1aebfbcbc388ef0d63ef081af 201 Pfam PF02132 RecR protein 41 77 1.6E-14 T 22-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger YE3091 44c630b1aebfbcbc388ef0d63ef081af 201 SUPERFAMILY SSF111304 2 199 3.01E-70 T 22-04-2016 IPR023627 Recombination protein RecR YE1137 b526702e96118ecc7e63e10c906267ab 293 SMART SM01130 1 291 3.6E-144 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 YE1137 b526702e96118ecc7e63e10c906267ab 293 PANTHER PTHR12128:SF34 1 293 1.4E-146 T 22-04-2016 YE1137 b526702e96118ecc7e63e10c906267ab 293 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 22-04-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YE1137 b526702e96118ecc7e63e10c906267ab 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 7.89E-34 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 YE1137 b526702e96118ecc7e63e10c906267ab 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 7.89E-34 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 YE1137 b526702e96118ecc7e63e10c906267ab 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 7.89E-34 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 YE1137 b526702e96118ecc7e63e10c906267ab 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 7.89E-34 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 YE1137 b526702e96118ecc7e63e10c906267ab 293 Pfam PF00701 Dihydrodipicolinate synthetase family 2 289 1.3E-114 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 YE1137 b526702e96118ecc7e63e10c906267ab 293 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 22-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YE1137 b526702e96118ecc7e63e10c906267ab 293 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 289 5.8E-120 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YE1137 b526702e96118ecc7e63e10c906267ab 293 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 289 65.059 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YE1137 b526702e96118ecc7e63e10c906267ab 293 SUPERFAMILY SSF51569 2 291 2.62E-98 T 22-04-2016 YE1137 b526702e96118ecc7e63e10c906267ab 293 PIRSF PIRSF001365 1 293 2.4E-94 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 YE1137 b526702e96118ecc7e63e10c906267ab 293 PANTHER PTHR12128 1 293 1.4E-146 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 YE1137 b526702e96118ecc7e63e10c906267ab 293 Gene3D G3DSA:3.20.20.70 1 293 9.1E-116 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YE2401 594a2d98e36aad11c6817082690b1354 233 PANTHER PTHR10108:SF809 3 227 5.5E-108 T 22-04-2016 YE2401 594a2d98e36aad11c6817082690b1354 233 Hamap MF_01589 tRNA (cmo5U34)-methyltransferase [cmoA]. 1 228 40.249 T 22-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 YE2401 594a2d98e36aad11c6817082690b1354 233 SUPERFAMILY SSF53335 6 228 2.01E-40 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE2401 594a2d98e36aad11c6817082690b1354 233 Pfam PF13649 Methyltransferase domain 46 144 6.9E-14 T 22-04-2016 YE2401 594a2d98e36aad11c6817082690b1354 233 Gene3D G3DSA:3.40.50.150 5 227 2.6E-65 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE2401 594a2d98e36aad11c6817082690b1354 233 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 1 228 2.1E-120 T 22-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 YE2401 594a2d98e36aad11c6817082690b1354 233 PIRSF PIRSF006325 1 229 1.7E-126 T 22-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 YE2401 594a2d98e36aad11c6817082690b1354 233 PANTHER PTHR10108 3 227 5.5E-108 T 22-04-2016 YE0091 be7dccf2c62ee323d285be7a35e99655 329 PANTHER PTHR30368:SF2 1 329 4.8E-195 T 22-04-2016 YE0091 be7dccf2c62ee323d285be7a35e99655 329 Gene3D G3DSA:3.40.190.10 21 165 4.3E-52 T 22-04-2016 YE0091 be7dccf2c62ee323d285be7a35e99655 329 Gene3D G3DSA:3.40.190.10 170 295 2.1E-33 T 22-04-2016 YE0091 be7dccf2c62ee323d285be7a35e99655 329 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 13 326 2.3E-175 T 22-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 YE0091 be7dccf2c62ee323d285be7a35e99655 329 Pfam PF13531 Bacterial extracellular solute-binding protein 31 280 4.6E-46 T 22-04-2016 YE0091 be7dccf2c62ee323d285be7a35e99655 329 PANTHER PTHR30368 1 329 4.8E-195 T 22-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 YE0091 be7dccf2c62ee323d285be7a35e99655 329 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 145 153 - T 22-04-2016 IPR000957 Sulphate/thiosulphate-binding, conserved site GO:0008271|GO:0008272|GO:0030288 YE0091 be7dccf2c62ee323d285be7a35e99655 329 SUPERFAMILY SSF53850 21 326 5.91E-92 T 22-04-2016 YE3354 f45348415f99b787b1ee4d77ea07d3b9 249 SUPERFAMILY SSF51735 5 247 4.21E-74 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3354 f45348415f99b787b1ee4d77ea07d3b9 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 247 2.3E-58 T 22-04-2016 YE3354 f45348415f99b787b1ee4d77ea07d3b9 249 Gene3D G3DSA:3.40.50.720 1 246 7.9E-77 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3354 f45348415f99b787b1ee4d77ea07d3b9 249 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 181 1.5E-5 T 22-04-2016 YE3354 f45348415f99b787b1ee4d77ea07d3b9 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 2.6E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE3354 f45348415f99b787b1ee4d77ea07d3b9 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 2.6E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE3354 f45348415f99b787b1ee4d77ea07d3b9 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.6E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE3354 f45348415f99b787b1ee4d77ea07d3b9 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 2.6E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE3354 f45348415f99b787b1ee4d77ea07d3b9 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.6E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE3354 f45348415f99b787b1ee4d77ea07d3b9 249 PANTHER PTHR24322 11 182 3.3E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE3354 f45348415f99b787b1ee4d77ea07d3b9 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YE4081 5a77902bbe034efb7da07edca875857b 300 Gene3D G3DSA:1.10.3720.10 88 296 1.0E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE4081 5a77902bbe034efb7da07edca875857b 300 PANTHER PTHR30465 10 300 5.7E-143 T 22-04-2016 YE4081 5a77902bbe034efb7da07edca875857b 300 PANTHER PTHR30465:SF10 10 300 5.7E-143 T 22-04-2016 YE4081 5a77902bbe034efb7da07edca875857b 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 17 69 6.6E-14 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YE4081 5a77902bbe034efb7da07edca875857b 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 299 4.2E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE4081 5a77902bbe034efb7da07edca875857b 300 SUPERFAMILY SSF161098 93 280 1.57E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE3600 cabedd243c2efaca701daa2155b2b74e 758 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 22-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 YE3600 cabedd243c2efaca701daa2155b2b74e 758 Pfam PF07503 HypF finger 107 140 1.7E-18 T 22-04-2016 IPR011125 Zinc finger, HypF-type GO:0008270 UniPathway: UPA00335 YE3600 cabedd243c2efaca701daa2155b2b74e 758 Pfam PF07503 HypF finger 157 189 7.9E-17 T 22-04-2016 IPR011125 Zinc finger, HypF-type GO:0008270 UniPathway: UPA00335 YE3600 cabedd243c2efaca701daa2155b2b74e 758 Pfam PF00708 Acylphosphatase 6 89 2.9E-16 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 YE3600 cabedd243c2efaca701daa2155b2b74e 758 SUPERFAMILY SSF53067 674 755 8.58E-5 T 22-04-2016 YE3600 cabedd243c2efaca701daa2155b2b74e 758 Gene3D G3DSA:3.90.870.10 202 377 1.8E-44 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain YE3600 cabedd243c2efaca701daa2155b2b74e 758 TIGRFAM TIGR00143 hypF: carbamoyltransferase HypF 8 754 3.5E-258 T 22-04-2016 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 UniPathway: UPA00335 YE3600 cabedd243c2efaca701daa2155b2b74e 758 PIRSF PIRSF006256 2 758 2.8E-272 T 22-04-2016 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 UniPathway: UPA00335 YE3600 cabedd243c2efaca701daa2155b2b74e 758 Pfam PF01300 Telomere recombination 210 386 3.0E-49 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 YE3600 cabedd243c2efaca701daa2155b2b74e 758 Gene3D G3DSA:3.30.70.100 4 89 2.0E-22 T 22-04-2016 YE3600 cabedd243c2efaca701daa2155b2b74e 758 SUPERFAMILY SSF54975 6 89 2.4E-18 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 YE3600 cabedd243c2efaca701daa2155b2b74e 758 SUPERFAMILY SSF55821 174 391 2.29E-46 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain YE3600 cabedd243c2efaca701daa2155b2b74e 758 PANTHER PTHR10029:SF4 6 757 0.0 T 22-04-2016 YE3600 cabedd243c2efaca701daa2155b2b74e 758 PANTHER PTHR10029 6 757 0.0 T 22-04-2016 YE1490 ce7a29bbb9d4ed9e7c37590170fb4000 375 Hamap MF_01012 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC [rlmC]. 1 375 80.519 T 22-04-2016 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 YE1490 ce7a29bbb9d4ed9e7c37590170fb4000 375 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 3 367 3.9E-57 T 22-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 YE1490 ce7a29bbb9d4ed9e7c37590170fb4000 375 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 21 373 1.5E-19 T 22-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 YE1490 ce7a29bbb9d4ed9e7c37590170fb4000 375 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 307 338 - T 22-04-2016 IPR030390 RNA methyltransferase TrmA, active site YE1490 ce7a29bbb9d4ed9e7c37590170fb4000 375 PANTHER PTHR11061:SF36 8 374 1.5E-246 T 22-04-2016 YE1490 ce7a29bbb9d4ed9e7c37590170fb4000 375 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 357 367 - T 22-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site YE1490 ce7a29bbb9d4ed9e7c37590170fb4000 375 TIGRFAM TIGR02085 meth_trns_rumB: 23S rRNA (uracil-5-)-methyltransferase RumB 2 374 1.7E-213 T 22-04-2016 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 YE1490 ce7a29bbb9d4ed9e7c37590170fb4000 375 PANTHER PTHR11061 8 374 1.5E-246 T 22-04-2016 YE1490 ce7a29bbb9d4ed9e7c37590170fb4000 375 Gene3D G3DSA:3.40.50.150 181 372 7.0E-50 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE1490 ce7a29bbb9d4ed9e7c37590170fb4000 375 SUPERFAMILY SSF53335 4 374 1.08E-55 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE0822 74731ccfcdd96a7b505230c3f5dc0093 276 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 26 267 5.2E-38 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 YE0822 74731ccfcdd96a7b505230c3f5dc0093 276 SUPERFAMILY SSF52518 3 273 1.54E-72 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE0822 74731ccfcdd96a7b505230c3f5dc0093 276 PANTHER PTHR11624:SF86 7 276 1.7E-80 T 22-04-2016 YE0822 74731ccfcdd96a7b505230c3f5dc0093 276 Gene3D G3DSA:3.40.50.970 3 274 2.0E-79 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE0822 74731ccfcdd96a7b505230c3f5dc0093 276 PANTHER PTHR11624 7 276 1.7E-80 T 22-04-2016 IPR033247 Transketolase family YE2902 04362aa1704f58de0b9de9bba886458a 670 Pfam PF02151 UvrB/uvrC motif 631 665 2.3E-9 T 22-04-2016 IPR001943 UVR domain GO:0005515 YE2902 04362aa1704f58de0b9de9bba886458a 670 Pfam PF04851 Type III restriction enzyme, res subunit 11 92 9.8E-10 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 YE2902 04362aa1704f58de0b9de9bba886458a 670 Pfam PF00271 Helicase conserved C-terminal domain 435 545 5.2E-19 T 22-04-2016 IPR001650 Helicase, C-terminal YE2902 04362aa1704f58de0b9de9bba886458a 670 Gene3D G3DSA:3.30.2060.10 159 231 3.1E-11 T 22-04-2016 YE2902 04362aa1704f58de0b9de9bba886458a 670 Pfam PF12344 Ultra-violet resistance protein B 552 593 7.0E-20 T 22-04-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain YE2902 04362aa1704f58de0b9de9bba886458a 670 SUPERFAMILY SSF46600 618 666 1.44E-12 T 22-04-2016 IPR001943 UVR domain GO:0005515 YE2902 04362aa1704f58de0b9de9bba886458a 670 PANTHER PTHR24029 1 669 0.0 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 YE2902 04362aa1704f58de0b9de9bba886458a 670 SMART SM00487 9 426 4.4E-29 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain YE2902 04362aa1704f58de0b9de9bba886458a 670 SUPERFAMILY SSF52540 459 579 1.54E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2902 04362aa1704f58de0b9de9bba886458a 670 SUPERFAMILY SSF52540 37 82 1.54E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2902 04362aa1704f58de0b9de9bba886458a 670 Gene3D G3DSA:3.40.50.300 5 89 3.0E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2902 04362aa1704f58de0b9de9bba886458a 670 Gene3D G3DSA:3.40.50.300 388 406 3.0E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2902 04362aa1704f58de0b9de9bba886458a 670 Gene3D G3DSA:3.40.50.300 278 338 3.0E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2902 04362aa1704f58de0b9de9bba886458a 670 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 663 0.0 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 YE2902 04362aa1704f58de0b9de9bba886458a 670 Gene3D G3DSA:3.40.50.300 421 581 1.4E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2902 04362aa1704f58de0b9de9bba886458a 670 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 665 44.044 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 YE2902 04362aa1704f58de0b9de9bba886458a 670 Gene3D G3DSA:4.10.860.10 626 669 5.2E-19 T 22-04-2016 IPR001943 UVR domain GO:0005515 YE2902 04362aa1704f58de0b9de9bba886458a 670 SMART SM00490 460 546 6.3E-20 T 22-04-2016 IPR001650 Helicase, C-terminal YE2902 04362aa1704f58de0b9de9bba886458a 670 SUPERFAMILY SSF52540 4 415 4.78E-139 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0062 f1de8b0d8515910d90ad35c117b79144 409 SUPERFAMILY SSF102645 190 405 6.54E-80 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 YE0062 f1de8b0d8515910d90ad35c117b79144 409 PANTHER PTHR14359 9 405 3.1E-206 T 22-04-2016 YE0062 f1de8b0d8515910d90ad35c117b79144 409 PANTHER PTHR14359:SF20 9 405 3.1E-206 T 22-04-2016 YE0062 f1de8b0d8515910d90ad35c117b79144 409 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 193 374 7.0E-75 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 YE0062 f1de8b0d8515910d90ad35c117b79144 409 Gene3D G3DSA:3.40.50.1950 8 190 5.1E-65 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 YE0062 f1de8b0d8515910d90ad35c117b79144 409 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 10 400 1.3E-162 T 22-04-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|UniPathway: UPA00241|UniPathway: UPA00241 YE0062 f1de8b0d8515910d90ad35c117b79144 409 Pfam PF02441 Flavoprotein 12 139 1.6E-32 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 YE0062 f1de8b0d8515910d90ad35c117b79144 409 Gene3D G3DSA:3.40.50.10300 191 407 2.9E-89 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 YE0062 f1de8b0d8515910d90ad35c117b79144 409 SUPERFAMILY SSF52507 8 185 1.83E-59 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 YE2982 d9f57cd993067d101c9febe3b70cdf7a 250 SUPERFAMILY SSF56784 1 247 4.14E-65 T 22-04-2016 IPR023214 HAD-like domain YE2982 d9f57cd993067d101c9febe3b70cdf7a 250 PANTHER PTHR19288:SF40 3 247 1.7E-167 T 22-04-2016 YE2982 d9f57cd993067d101c9febe3b70cdf7a 250 Gene3D G3DSA:3.40.50.10410 83 173 1.2E-31 T 22-04-2016 IPR023215 Nitrophenylphosphatase-like domain YE2982 d9f57cd993067d101c9febe3b70cdf7a 250 Pfam PF13242 HAD-hyrolase-like 174 246 1.1E-20 T 22-04-2016 YE2982 d9f57cd993067d101c9febe3b70cdf7a 250 Pfam PF13344 Haloacid dehalogenase-like hydrolase 6 105 5.9E-24 T 22-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA YE2982 d9f57cd993067d101c9febe3b70cdf7a 250 PANTHER PTHR19288 3 247 1.7E-167 T 22-04-2016 YE2982 d9f57cd993067d101c9febe3b70cdf7a 250 Gene3D G3DSA:3.40.50.1000 1 79 2.4E-42 T 22-04-2016 IPR023214 HAD-like domain YE2982 d9f57cd993067d101c9febe3b70cdf7a 250 Gene3D G3DSA:3.40.50.1000 174 247 2.4E-42 T 22-04-2016 IPR023214 HAD-like domain YE2982 d9f57cd993067d101c9febe3b70cdf7a 250 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 6 223 3.6E-63 T 22-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA YE3210 7d55fc13c8143b30cec325bdf2327f98 210 Gene3D G3DSA:1.10.10.60 160 208 9.5E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE3210 7d55fc13c8143b30cec325bdf2327f98 210 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 9 128 2.0E-51 T 22-04-2016 IPR013559 YheO-like YE3210 7d55fc13c8143b30cec325bdf2327f98 210 PANTHER PTHR35568 5 205 6.7E-58 T 22-04-2016 YE3210 7d55fc13c8143b30cec325bdf2327f98 210 Pfam PF08348 YheO-like PAS domain 10 118 1.7E-32 T 22-04-2016 IPR013559 YheO-like YE3210 7d55fc13c8143b30cec325bdf2327f98 210 Pfam PF13309 HTH domain 144 205 1.4E-16 T 22-04-2016 YE3210 7d55fc13c8143b30cec325bdf2327f98 210 PANTHER PTHR35568:SF1 5 205 6.7E-58 T 22-04-2016 YE0922 b6e1053961c08a34926bb49df3015dc3 238 Pfam PF00929 Exonuclease 6 158 5.3E-35 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III YE0922 b6e1053961c08a34926bb49df3015dc3 238 SMART SM00479 1 167 3.3E-40 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III YE0922 b6e1053961c08a34926bb49df3015dc3 238 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 1 208 8.0E-83 T 22-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE0922 b6e1053961c08a34926bb49df3015dc3 238 PANTHER PTHR30231:SF0 5 232 2.2E-155 T 22-04-2016 YE0922 b6e1053961c08a34926bb49df3015dc3 238 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 9 225 6.8E-85 T 22-04-2016 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE0922 b6e1053961c08a34926bb49df3015dc3 238 Gene3D G3DSA:3.30.420.10 7 168 2.8E-59 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE0922 b6e1053961c08a34926bb49df3015dc3 238 SUPERFAMILY SSF53098 5 168 2.12E-49 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE0922 b6e1053961c08a34926bb49df3015dc3 238 PANTHER PTHR30231 5 232 2.2E-155 T 22-04-2016 YE2963 4a28a22fa6fa9b37546483a75ce0ff71 899 SUPERFAMILY SSF47384 660 733 2.55E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE2963 4a28a22fa6fa9b37546483a75ce0ff71 899 Pfam PF13492 GAF domain 569 646 1.5E-10 T 22-04-2016 IPR003018 GAF domain GO:0005515 YE2963 4a28a22fa6fa9b37546483a75ce0ff71 899 Gene3D G3DSA:3.30.565.10 734 889 3.5E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE2963 4a28a22fa6fa9b37546483a75ce0ff71 899 SUPERFAMILY SSF52402 254 361 2.09E-7 T 22-04-2016 YE2963 4a28a22fa6fa9b37546483a75ce0ff71 899 SUPERFAMILY SSF55781 510 658 1.33E-5 T 22-04-2016 IPR029016 GAF domain-like YE2963 4a28a22fa6fa9b37546483a75ce0ff71 899 PANTHER PTHR24423:SF562 23 198 5.3E-135 T 22-04-2016 YE2963 4a28a22fa6fa9b37546483a75ce0ff71 899 PANTHER PTHR24423:SF562 599 889 5.3E-135 T 22-04-2016 YE2963 4a28a22fa6fa9b37546483a75ce0ff71 899 SUPERFAMILY SSF55874 721 887 3.93E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE2963 4a28a22fa6fa9b37546483a75ce0ff71 899 Gene3D G3DSA:1.20.120.620 398 503 3.7E-40 T 22-04-2016 YE2963 4a28a22fa6fa9b37546483a75ce0ff71 899 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 777 886 3.7E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE2963 4a28a22fa6fa9b37546483a75ce0ff71 899 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 23 231 3.8E-99 T 22-04-2016 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 YE2963 4a28a22fa6fa9b37546483a75ce0ff71 899 Gene3D G3DSA:3.40.50.300 21 230 2.1E-102 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2963 4a28a22fa6fa9b37546483a75ce0ff71 899 Pfam PF00512 His Kinase A (phospho-acceptor) domain 666 732 2.1E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE2963 4a28a22fa6fa9b37546483a75ce0ff71 899 Pfam PF13493 Domain of unknown function (DUF4118) 404 508 2.1E-30 T 22-04-2016 IPR025201 Sensor protein KdpD, transmembrane domain YE2963 4a28a22fa6fa9b37546483a75ce0ff71 899 Gene3D G3DSA:1.10.287.130 660 728 4.4E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE2963 4a28a22fa6fa9b37546483a75ce0ff71 899 PRINTS PR00344 Bacterial sensor protein C-terminal signature 870 883 2.2E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE2963 4a28a22fa6fa9b37546483a75ce0ff71 899 PRINTS PR00344 Bacterial sensor protein C-terminal signature 813 827 2.2E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE2963 4a28a22fa6fa9b37546483a75ce0ff71 899 PRINTS PR00344 Bacterial sensor protein C-terminal signature 831 841 2.2E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE2963 4a28a22fa6fa9b37546483a75ce0ff71 899 PRINTS PR00344 Bacterial sensor protein C-terminal signature 846 864 2.2E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE2963 4a28a22fa6fa9b37546483a75ce0ff71 899 PANTHER PTHR24423 23 198 5.3E-135 T 22-04-2016 YE2963 4a28a22fa6fa9b37546483a75ce0ff71 899 PANTHER PTHR24423 599 889 5.3E-135 T 22-04-2016 YE2963 4a28a22fa6fa9b37546483a75ce0ff71 899 SMART SM00388 665 732 7.3E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE2963 4a28a22fa6fa9b37546483a75ce0ff71 899 Gene3D G3DSA:3.40.50.620 245 360 2.0E-8 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YE2963 4a28a22fa6fa9b37546483a75ce0ff71 899 SMART SM00387 776 886 8.8E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE0659 b8926b51cce76f3ffa73000e1ed2ba06 164 Pfam PF10369 Small subunit of acetolactate synthase 85 159 1.3E-23 T 22-04-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YE0659 b8926b51cce76f3ffa73000e1ed2ba06 164 Gene3D G3DSA:3.30.70.260 1 77 8.6E-36 T 22-04-2016 YE0659 b8926b51cce76f3ffa73000e1ed2ba06 164 Gene3D G3DSA:3.30.70.1150 84 163 6.7E-27 T 22-04-2016 YE0659 b8926b51cce76f3ffa73000e1ed2ba06 164 PANTHER PTHR30239 1 163 1.5E-94 T 22-04-2016 YE0659 b8926b51cce76f3ffa73000e1ed2ba06 164 Pfam PF01842 ACT domain 5 69 6.9E-15 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 YE0659 b8926b51cce76f3ffa73000e1ed2ba06 164 SUPERFAMILY SSF55021 3 75 1.16E-21 T 22-04-2016 YE0659 b8926b51cce76f3ffa73000e1ed2ba06 164 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 2 77 8.0E-37 T 22-04-2016 YE0659 b8926b51cce76f3ffa73000e1ed2ba06 164 SUPERFAMILY SSF55021 80 163 4.43E-25 T 22-04-2016 YE0659 b8926b51cce76f3ffa73000e1ed2ba06 164 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 3 160 4.0E-66 T 22-04-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YE3978 311b838e240325e96bf1b6952c516271 305 PANTHER PTHR32432 10 222 2.4E-39 T 22-04-2016 YE3978 311b838e240325e96bf1b6952c516271 305 Pfam PF11104 Type IV pilus assembly protein PilM; 24 180 9.3E-17 T 22-04-2016 IPR005883 Type IV pilus assembly protein PilM YE3978 311b838e240325e96bf1b6952c516271 305 SUPERFAMILY SSF53067 59 178 9.71E-5 T 22-04-2016 YE3978 311b838e240325e96bf1b6952c516271 305 PANTHER PTHR32432:SF3 10 222 2.4E-39 T 22-04-2016 YE3743 60d5bd4dfe44b2d1f7224e1f3f5378dd 134 PANTHER PTHR39579 1 134 1.9E-54 T 22-04-2016 YE3743 60d5bd4dfe44b2d1f7224e1f3f5378dd 134 PIRSF PIRSF006318 1 134 1.7E-52 T 22-04-2016 IPR009386 Protein of unknown function DUF1043 YE3743 60d5bd4dfe44b2d1f7224e1f3f5378dd 134 Pfam PF06295 Protein of unknown function (DUF1043) 6 127 6.2E-51 T 22-04-2016 IPR009386 Protein of unknown function DUF1043 YE0543 2eef9896c13caefab658e37c939dcada 401 PANTHER PTHR12526 163 384 3.7E-19 T 22-04-2016 YE0543 2eef9896c13caefab658e37c939dcada 401 Pfam PF00534 Glycosyl transferases group 1 213 360 5.3E-12 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 YE0543 2eef9896c13caefab658e37c939dcada 401 SUPERFAMILY SSF53756 67 385 5.23E-28 T 22-04-2016 YE0543 2eef9896c13caefab658e37c939dcada 401 Gene3D G3DSA:3.40.50.2000 174 361 2.5E-12 T 22-04-2016 YE2371 7cdfa20281ec0eee03bcff1af39e001d 228 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 5 228 28.78 T 22-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 YE2371 7cdfa20281ec0eee03bcff1af39e001d 228 PANTHER PTHR34108:SF1 3 228 1.3E-79 T 22-04-2016 YE2371 7cdfa20281ec0eee03bcff1af39e001d 228 SUPERFAMILY SSF63848 122 227 5.75E-31 T 22-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 YE2371 7cdfa20281ec0eee03bcff1af39e001d 228 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 6 227 2.1E-72 T 22-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 YE2371 7cdfa20281ec0eee03bcff1af39e001d 228 Gene3D G3DSA:2.160.20.70 115 227 1.6E-37 T 22-04-2016 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 YE2371 7cdfa20281ec0eee03bcff1af39e001d 228 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 124 224 1.7E-30 T 22-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 YE2371 7cdfa20281ec0eee03bcff1af39e001d 228 PANTHER PTHR34108 3 228 1.3E-79 T 22-04-2016 YE2371 7cdfa20281ec0eee03bcff1af39e001d 228 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 102 2.4E-34 T 22-04-2016 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 YE1375 db97bd0542808c22219ef263c944a1f6 557 Gene3D G3DSA:3.40.50.970 343 549 1.7E-30 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE1375 db97bd0542808c22219ef263c944a1f6 557 Gene3D G3DSA:3.40.50.970 7 176 1.6E-42 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE1375 db97bd0542808c22219ef263c944a1f6 557 PANTHER PTHR18968:SF114 1 556 6.2E-223 T 22-04-2016 YE1375 db97bd0542808c22219ef263c944a1f6 557 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 420 536 5.1E-7 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 YE1375 db97bd0542808c22219ef263c944a1f6 557 SUPERFAMILY SSF52518 366 553 1.77E-31 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE1375 db97bd0542808c22219ef263c944a1f6 557 PANTHER PTHR18968 1 556 6.2E-223 T 22-04-2016 YE1375 db97bd0542808c22219ef263c944a1f6 557 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 4 554 32.398 T 22-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 YE1375 db97bd0542808c22219ef263c944a1f6 557 SUPERFAMILY SSF52518 7 175 4.18E-30 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE1375 db97bd0542808c22219ef263c944a1f6 557 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 130 3.2E-26 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 YE1375 db97bd0542808c22219ef263c944a1f6 557 Pfam PF16582 Middle domain of thiamine pyrophosphate 184 389 4.5E-87 T 22-04-2016 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 YE1375 db97bd0542808c22219ef263c944a1f6 557 SUPERFAMILY SSF52467 204 360 2.76E-6 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain YE1375 db97bd0542808c22219ef263c944a1f6 557 PIRSF PIRSF004983 1 557 2.4E-176 T 22-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 YE1375 db97bd0542808c22219ef263c944a1f6 557 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 10 431 3.9E-139 T 22-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 YE0855 fcab7167428a539bea98a8682cb9f39a 118 Pfam PF10743 Regulatory phage protein cox 5 82 4.8E-21 T 22-04-2016 IPR019679 Bacteriophage P2, regulatory protein Cox YE0852 fb8573933b936bc99e2d926191be8f70 385 Gene3D G3DSA:1.20.59.10 2 104 9.1E-42 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 YE0852 fb8573933b936bc99e2d926191be8f70 385 Gene3D G3DSA:3.30.70.260 294 377 1.4E-26 T 22-04-2016 YE0852 fb8573933b936bc99e2d926191be8f70 385 Pfam PF01817 Chorismate mutase type II 10 88 4.0E-16 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 YE0852 fb8573933b936bc99e2d926191be8f70 385 SUPERFAMILY SSF53850 104 290 1.74E-57 T 22-04-2016 YE0852 fb8573933b936bc99e2d926191be8f70 385 SUPERFAMILY SSF55021 279 376 6.14E-23 T 22-04-2016 YE0852 fb8573933b936bc99e2d926191be8f70 385 Pfam PF00800 Prephenate dehydratase 105 285 8.5E-63 T 22-04-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 YE0852 fb8573933b936bc99e2d926191be8f70 385 Gene3D G3DSA:3.40.190.10 193 272 3.7E-29 T 22-04-2016 YE0852 fb8573933b936bc99e2d926191be8f70 385 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 324 331 - T 22-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 YE0852 fb8573933b936bc99e2d926191be8f70 385 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 6 88 2.7E-34 T 22-04-2016 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00121 YE0852 fb8573933b936bc99e2d926191be8f70 385 PIRSF PIRSF001500 1 379 1.1E-143 T 22-04-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 YE0852 fb8573933b936bc99e2d926191be8f70 385 PANTHER PTHR21022 3 378 5.5E-155 T 22-04-2016 YE0852 fb8573933b936bc99e2d926191be8f70 385 SUPERFAMILY SSF48600 5 91 4.03E-21 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 YE0852 fb8573933b936bc99e2d926191be8f70 385 SMART SM00830 10 90 1.4E-22 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 YE0852 fb8573933b936bc99e2d926191be8f70 385 PANTHER PTHR21022:SF0 3 378 5.5E-155 T 22-04-2016 YE0852 fb8573933b936bc99e2d926191be8f70 385 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 260 282 - T 22-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 YE0852 fb8573933b936bc99e2d926191be8f70 385 Gene3D G3DSA:3.40.190.10 105 192 5.7E-33 T 22-04-2016 YE3249 86d434fefc7926452514bd14acff022c 171 SUPERFAMILY SSF46689 1 54 9.14E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE3249 86d434fefc7926452514bd14acff022c 171 Gene3D G3DSA:1.10.10.60 64 160 4.8E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE3249 86d434fefc7926452514bd14acff022c 171 Gene3D G3DSA:1.10.10.60 7 54 8.0E-4 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE3249 86d434fefc7926452514bd14acff022c 171 SUPERFAMILY SSF46689 57 164 6.45E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE3249 86d434fefc7926452514bd14acff022c 171 Pfam PF13518 Helix-turn-helix domain 66 118 3.1E-11 T 22-04-2016 YE3249 86d434fefc7926452514bd14acff022c 171 PANTHER PTHR33795 1 171 8.5E-34 T 22-04-2016 YE3249 86d434fefc7926452514bd14acff022c 171 PANTHER PTHR33795:SF1 1 171 8.5E-34 T 22-04-2016 YE3672 15053f92bbeb8a7477bb551b00849218 414 Pfam PF13520 Amino acid permease 8 397 1.4E-29 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YE3672 15053f92bbeb8a7477bb551b00849218 414 PIRSF PIRSF006060 1 411 4.7E-50 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YE3672 15053f92bbeb8a7477bb551b00849218 414 PANTHER PTHR11785 1 408 1.4E-158 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YE3672 15053f92bbeb8a7477bb551b00849218 414 PANTHER PTHR11785:SF415 1 408 1.4E-158 T 22-04-2016 YE0551 c83c0dab7934dfe48bffe9151c1a47ae 469 PANTHER PTHR30175 21 344 2.8E-101 T 22-04-2016 YE0551 c83c0dab7934dfe48bffe9151c1a47ae 469 SMART SM00640 31 432 1.5E-134 T 22-04-2016 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 YE0551 c83c0dab7934dfe48bffe9151c1a47ae 469 Gene3D G3DSA:2.60.120.560 318 443 6.8E-16 T 22-04-2016 IPR013189 Glycosyl hydrolase family 32, C-terminal YE0551 c83c0dab7934dfe48bffe9151c1a47ae 469 SUPERFAMILY SSF49899 336 462 4.99E-17 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain YE0551 c83c0dab7934dfe48bffe9151c1a47ae 469 PANTHER PTHR30175:SF8 21 344 2.8E-101 T 22-04-2016 YE0551 c83c0dab7934dfe48bffe9151c1a47ae 469 Gene3D G3DSA:2.115.10.20 38 317 4.9E-21 T 22-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain YE0551 c83c0dab7934dfe48bffe9151c1a47ae 469 SUPERFAMILY SSF75005 21 336 3.71E-109 T 22-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain YE0551 c83c0dab7934dfe48bffe9151c1a47ae 469 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 31 44 - T 22-04-2016 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 YE0551 c83c0dab7934dfe48bffe9151c1a47ae 469 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 16 442 1.2E-156 T 22-04-2016 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26|UniPathway: UPA00238 YE0551 c83c0dab7934dfe48bffe9151c1a47ae 469 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 31 336 1.4E-102 T 22-04-2016 IPR013148 Glycosyl hydrolase family 32, N-terminal YE4198 0de03a2c4d941cfcfc789efff13c9c1b 258 PANTHER PTHR24220:SF560 13 253 5.0E-198 T 22-04-2016 YE4198 0de03a2c4d941cfcfc789efff13c9c1b 258 SMART SM00382 36 238 4.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YE4198 0de03a2c4d941cfcfc789efff13c9c1b 258 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE4198 0de03a2c4d941cfcfc789efff13c9c1b 258 Pfam PF00005 ABC transporter 27 182 2.0E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE4198 0de03a2c4d941cfcfc789efff13c9c1b 258 PANTHER PTHR24220 13 253 5.0E-198 T 22-04-2016 YE4198 0de03a2c4d941cfcfc789efff13c9c1b 258 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 12 258 7.3E-121 T 22-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 YE4198 0de03a2c4d941cfcfc789efff13c9c1b 258 Gene3D G3DSA:3.40.50.300 12 252 2.9E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE4198 0de03a2c4d941cfcfc789efff13c9c1b 258 SUPERFAMILY SSF52540 12 245 4.61E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0076 13ba4681caac6dcc91c33fb099d15aeb 455 Pfam PF01551 Peptidase family M23 356 449 1.3E-25 T 22-04-2016 IPR016047 Peptidase M23 YE0076 13ba4681caac6dcc91c33fb099d15aeb 455 PANTHER PTHR21666:SF213 9 455 1.8E-197 T 22-04-2016 YE0076 13ba4681caac6dcc91c33fb099d15aeb 455 SUPERFAMILY SSF51261 282 453 5.62E-47 T 22-04-2016 IPR011055 Duplicated hybrid motif YE0076 13ba4681caac6dcc91c33fb099d15aeb 455 Gene3D G3DSA:2.70.70.10 318 454 2.7E-37 T 22-04-2016 YE0076 13ba4681caac6dcc91c33fb099d15aeb 455 PANTHER PTHR21666 9 455 1.8E-197 T 22-04-2016 YE2335 d409067fa1b71027402039960d069e16 176 Pfam PF00847 AP2 domain 121 168 2.7E-6 T 22-04-2016 IPR001471 AP2/ERF domain GO:0003700|GO:0006355 YE2335 d409067fa1b71027402039960d069e16 176 SUPERFAMILY SSF54171 121 170 4.38E-9 T 22-04-2016 IPR016177 DNA-binding domain GO:0003677 YE2335 d409067fa1b71027402039960d069e16 176 Pfam PF13392 HNH endonuclease 70 111 5.4E-17 T 22-04-2016 IPR003615 HNH nuclease YE2335 d409067fa1b71027402039960d069e16 176 SUPERFAMILY SSF54060 13 115 1.53E-22 T 22-04-2016 YE2713 b45a17070e42ebd36b3c96bc0dce963f 225 PANTHER PTHR34857 1 225 5.2E-68 T 22-04-2016 YE2713 b45a17070e42ebd36b3c96bc0dce963f 225 TIGRFAM TIGR02454 ECF_T_CbiQ: cobalt ECF transporter T component CbiQ 17 215 1.2E-50 T 22-04-2016 IPR012809 Cobalt ECF transporter T component CbiQ GO:0005887|GO:0006824|GO:0043190 YE2713 b45a17070e42ebd36b3c96bc0dce963f 225 PANTHER PTHR34857:SF1 1 225 5.2E-68 T 22-04-2016 YE2713 b45a17070e42ebd36b3c96bc0dce963f 225 Pfam PF02361 Cobalt transport protein 14 221 4.6E-44 T 22-04-2016 IPR003339 ABC/ECF transporter, transmembrane component YE0698 aee20d6cdd19734b14c602271513c871 254 Pfam PF07729 FCD domain 99 226 2.7E-19 T 22-04-2016 IPR011711 GntR, C-terminal YE0698 aee20d6cdd19734b14c602271513c871 254 Gene3D G3DSA:1.20.120.530 95 238 2.5E-19 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal YE0698 aee20d6cdd19734b14c602271513c871 254 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 2.6E-22 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YE0698 aee20d6cdd19734b14c602271513c871 254 SMART SM00895 99 227 1.6E-19 T 22-04-2016 IPR011711 GntR, C-terminal YE0698 aee20d6cdd19734b14c602271513c871 254 SMART SM00345 15 74 1.6E-26 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YE0698 aee20d6cdd19734b14c602271513c871 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 2.978799E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YE0698 aee20d6cdd19734b14c602271513c871 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 2.978799E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YE0698 aee20d6cdd19734b14c602271513c871 254 PANTHER PTHR11751 93 115 1.1E-49 T 22-04-2016 YE0698 aee20d6cdd19734b14c602271513c871 254 PANTHER PTHR11751 1 77 1.1E-49 T 22-04-2016 YE0698 aee20d6cdd19734b14c602271513c871 254 Gene3D G3DSA:1.10.10.10 7 76 5.8E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0698 aee20d6cdd19734b14c602271513c871 254 SUPERFAMILY SSF48008 95 235 8.63E-22 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal YE0698 aee20d6cdd19734b14c602271513c871 254 PANTHER PTHR11751:SF355 93 115 1.1E-49 T 22-04-2016 YE0698 aee20d6cdd19734b14c602271513c871 254 PANTHER PTHR11751:SF355 1 77 1.1E-49 T 22-04-2016 YE0698 aee20d6cdd19734b14c602271513c871 254 SUPERFAMILY SSF46785 5 76 2.45E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3678 8d1fdc8374050142da179311bc99cde2 272 PANTHER PTHR30622:SF3 3 272 5.4E-147 T 22-04-2016 YE3678 8d1fdc8374050142da179311bc99cde2 272 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 10 264 6.5E-99 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 YE3678 8d1fdc8374050142da179311bc99cde2 272 PANTHER PTHR30622 3 272 5.4E-147 T 22-04-2016 YE3678 8d1fdc8374050142da179311bc99cde2 272 Pfam PF02673 Bacitracin resistance protein BacA 10 265 7.4E-80 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 YE3678 8d1fdc8374050142da179311bc99cde2 272 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 5 271 18.169 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 YE4077 7b3fbea5b281ddc32d0b63ed2a5c0f7b 519 Gene3D G3DSA:3.40.50.1240 117 186 8.9E-4 T 22-04-2016 IPR029033 Histidine phosphatase superfamily YE4077 7b3fbea5b281ddc32d0b63ed2a5c0f7b 519 Pfam PF10995 GGDEF I-site like or GIL domain 160 471 1.4E-132 T 22-04-2016 IPR017745 Cellulose biosynthesis protein BcsE YE4077 7b3fbea5b281ddc32d0b63ed2a5c0f7b 519 TIGRFAM TIGR03369 cellulose_bcsE: cellulose biosynthesis protein BcsE 155 471 1.8E-111 T 22-04-2016 IPR017745 Cellulose biosynthesis protein BcsE YE2092 db4c41863ccf0756a519931bf06bdd1c 201 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 199 32.727 T 22-04-2016 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 YE2092 db4c41863ccf0756a519931bf06bdd1c 201 SUPERFAMILY SSF52218 1 199 1.61E-58 T 22-04-2016 IPR029039 Flavoprotein-like domain YE2092 db4c41863ccf0756a519931bf06bdd1c 201 Pfam PF02525 Flavodoxin-like fold 3 195 5.9E-47 T 22-04-2016 IPR003680 Flavodoxin-like fold YE2092 db4c41863ccf0756a519931bf06bdd1c 201 Gene3D G3DSA:3.40.50.360 1 199 3.2E-67 T 22-04-2016 IPR029039 Flavoprotein-like domain YE2092 db4c41863ccf0756a519931bf06bdd1c 201 PANTHER PTHR10204 1 201 4.7E-116 T 22-04-2016 YE2092 db4c41863ccf0756a519931bf06bdd1c 201 PANTHER PTHR10204:SF16 1 201 4.7E-116 T 22-04-2016 YE3831 9ddc33a16633efac8ea659a8ef78aafc 174 Pfam PF13518 Helix-turn-helix domain 69 121 3.2E-11 T 22-04-2016 YE3831 9ddc33a16633efac8ea659a8ef78aafc 174 SUPERFAMILY SSF48295 41 122 9.94E-15 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 YE3831 9ddc33a16633efac8ea659a8ef78aafc 174 PANTHER PTHR33795 4 174 8.5E-34 T 22-04-2016 YE3831 9ddc33a16633efac8ea659a8ef78aafc 174 SUPERFAMILY SSF46689 4 57 9.5E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE3831 9ddc33a16633efac8ea659a8ef78aafc 174 Gene3D G3DSA:1.10.10.60 67 163 5.0E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE3831 9ddc33a16633efac8ea659a8ef78aafc 174 Gene3D G3DSA:1.10.10.60 10 57 8.3E-4 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE3831 9ddc33a16633efac8ea659a8ef78aafc 174 PANTHER PTHR33795:SF1 4 174 8.5E-34 T 22-04-2016 YE2173 dd574aaa25c770aa76b21c91b2d48cb9 140 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 20 135 5.0E-47 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain YE2173 dd574aaa25c770aa76b21c91b2d48cb9 140 SUPERFAMILY SSF54637 20 138 4.27E-32 T 22-04-2016 IPR029069 HotDog domain YE2173 dd574aaa25c770aa76b21c91b2d48cb9 140 Gene3D G3DSA:3.10.129.10 2 138 1.1E-51 T 22-04-2016 IPR029069 HotDog domain YE2173 dd574aaa25c770aa76b21c91b2d48cb9 140 Pfam PF03061 Thioesterase superfamily 50 127 1.2E-15 T 22-04-2016 IPR006683 Thioesterase domain YE2173 dd574aaa25c770aa76b21c91b2d48cb9 140 Hamap MF_01936 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [menI]. 1 136 42.808 T 22-04-2016 IPR030863 1,4-dihydroxy-2-naphthoyl-CoA hydrolase, MenI GO:0009234|GO:0061522 KEGG: 00130+3.1.2.28|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 YE2173 dd574aaa25c770aa76b21c91b2d48cb9 140 PANTHER PTHR12418 1 136 2.7E-53 T 22-04-2016 YE2173 dd574aaa25c770aa76b21c91b2d48cb9 140 PANTHER PTHR12418:SF34 1 136 2.7E-53 T 22-04-2016 YE0278 dccd70da4f311673ad96ca95f945a934 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 1.4E-17 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 YE0278 dccd70da4f311673ad96ca95f945a934 394 SUPERFAMILY SSF50465 298 393 2.42E-35 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal YE0278 dccd70da4f311673ad96ca95f945a934 394 Gene3D G3DSA:2.40.30.10 300 393 2.8E-46 T 22-04-2016 YE0278 dccd70da4f311673ad96ca95f945a934 394 Gene3D G3DSA:2.40.30.10 209 298 4.2E-37 T 22-04-2016 YE0278 dccd70da4f311673ad96ca95f945a934 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site YE0278 dccd70da4f311673ad96ca95f945a934 394 SUPERFAMILY SSF52540 6 219 1.69E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0278 dccd70da4f311673ad96ca95f945a934 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 145 3.4E-14 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 YE0278 dccd70da4f311673ad96ca95f945a934 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 1.6E-33 T 22-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal YE0278 dccd70da4f311673ad96ca95f945a934 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 5.3E-58 T 22-04-2016 YE0278 dccd70da4f311673ad96ca95f945a934 394 PANTHER PTHR23115:SF151 1 393 0.0 T 22-04-2016 YE0278 dccd70da4f311673ad96ca95f945a934 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 394 7.6E-238 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 YE0278 dccd70da4f311673ad96ca95f945a934 394 Gene3D G3DSA:3.40.50.300 3 208 3.9E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0278 dccd70da4f311673ad96ca95f945a934 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 2.0E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YE0278 dccd70da4f311673ad96ca95f945a934 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 2.0E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YE0278 dccd70da4f311673ad96ca95f945a934 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.0E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YE0278 dccd70da4f311673ad96ca95f945a934 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 2.0E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YE0278 dccd70da4f311673ad96ca95f945a934 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.0E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YE0278 dccd70da4f311673ad96ca95f945a934 394 PANTHER PTHR23115 1 393 0.0 T 22-04-2016 YE0278 dccd70da4f311673ad96ca95f945a934 394 SUPERFAMILY SSF50447 205 301 4.71E-31 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain YE0278 dccd70da4f311673ad96ca95f945a934 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 61.074 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 YE0624 fd30d12f7e03fb65aad5d2fd1262baef 265 PANTHER PTHR34390:SF2 1 265 2.1E-145 T 22-04-2016 YE0624 fd30d12f7e03fb65aad5d2fd1262baef 265 PANTHER PTHR34390 1 265 2.1E-145 T 22-04-2016 YE0624 fd30d12f7e03fb65aad5d2fd1262baef 265 Pfam PF06738 Putative threonine/serine exporter 21 259 6.1E-69 T 22-04-2016 IPR010619 Putative threonine/serine exporter YE2965 05e4ce00d38c65c97736bd4ffbdb00ce 142 SUPERFAMILY SSF103481 41 141 7.32E-15 T 22-04-2016 YE2965 05e4ce00d38c65c97736bd4ffbdb00ce 142 Pfam PF00892 EamA-like transporter family 4 140 5.5E-22 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YE2965 05e4ce00d38c65c97736bd4ffbdb00ce 142 PANTHER PTHR22911 4 140 2.9E-28 T 22-04-2016 YE2736 be668ca47b5ffd3e9aabaf81a23e12a2 200 SMART SM00877 3 80 1.1E-24 T 22-04-2016 IPR000249 Microcompartment protein, bacteria YE2736 be668ca47b5ffd3e9aabaf81a23e12a2 200 SUPERFAMILY SSF143414 4 91 2.09E-22 T 22-04-2016 YE2736 be668ca47b5ffd3e9aabaf81a23e12a2 200 PANTHER PTHR33941:SF2 132 198 1.4E-39 T 22-04-2016 YE2736 be668ca47b5ffd3e9aabaf81a23e12a2 200 PANTHER PTHR33941:SF2 4 88 1.4E-39 T 22-04-2016 YE2736 be668ca47b5ffd3e9aabaf81a23e12a2 200 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 4 66 4.0E-21 T 22-04-2016 YE2736 be668ca47b5ffd3e9aabaf81a23e12a2 200 Pfam PF00936 BMC domain 4 80 1.4E-20 T 22-04-2016 IPR000249 Microcompartment protein, bacteria YE2736 be668ca47b5ffd3e9aabaf81a23e12a2 200 PANTHER PTHR33941 132 198 1.4E-39 T 22-04-2016 YE2736 be668ca47b5ffd3e9aabaf81a23e12a2 200 PANTHER PTHR33941 4 88 1.4E-39 T 22-04-2016 YE2745 66947ff566643715105bc56bed8709ed 116 SUPERFAMILY SSF143414 44 108 3.53E-14 T 22-04-2016 YE2745 66947ff566643715105bc56bed8709ed 116 SMART SM00877 44 116 3.0E-17 T 22-04-2016 IPR000249 Microcompartment protein, bacteria YE2745 66947ff566643715105bc56bed8709ed 116 PANTHER PTHR40449 1 116 1.3E-76 T 22-04-2016 YE2745 66947ff566643715105bc56bed8709ed 116 Pfam PF00936 BMC domain 45 111 4.1E-13 T 22-04-2016 IPR000249 Microcompartment protein, bacteria YE2745 66947ff566643715105bc56bed8709ed 116 PANTHER PTHR40449:SF2 1 116 1.3E-76 T 22-04-2016 YE2745 66947ff566643715105bc56bed8709ed 116 PIRSF PIRSF012296 1 116 9.6E-57 T 22-04-2016 IPR009307 Ethanolamine utilisation EutS GO:0006580 YE4176 5bb593e6cd09ce6468a4f3ca9692f12a 119 Pfam PF00825 Ribonuclease P 6 111 3.0E-32 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 YE4176 5bb593e6cd09ce6468a4f3ca9692f12a 119 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 115 17.596 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 YE4176 5bb593e6cd09ce6468a4f3ca9692f12a 119 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 56 70 - T 22-04-2016 IPR020539 Ribonuclease P, conserved site GO:0004526 YE4176 5bb593e6cd09ce6468a4f3ca9692f12a 119 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 5 114 1.2E-35 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 YE4176 5bb593e6cd09ce6468a4f3ca9692f12a 119 SUPERFAMILY SSF54211 5 114 7.84E-32 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YE4176 5bb593e6cd09ce6468a4f3ca9692f12a 119 Gene3D G3DSA:3.30.230.10 5 115 4.7E-34 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YE4176 5bb593e6cd09ce6468a4f3ca9692f12a 119 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 17 98 3.0E-41 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 YE4176 5bb593e6cd09ce6468a4f3ca9692f12a 119 PANTHER PTHR33992 2 119 1.2E-43 T 22-04-2016 YE3261 c743e034bddb42f7916a891ec00bb885 182 PANTHER PTHR38784 1 182 1.8E-99 T 22-04-2016 YE3261 c743e034bddb42f7916a891ec00bb885 182 SUPERFAMILY SSF52980 2 179 1.47E-71 T 22-04-2016 IPR011335 Restriction endonuclease type II-like YE3261 c743e034bddb42f7916a891ec00bb885 182 Pfam PF07152 YaeQ protein 1 173 9.7E-76 T 22-04-2016 IPR009822 YaeQ YE3261 c743e034bddb42f7916a891ec00bb885 182 PIRSF PIRSF011484 1 180 1.1E-69 T 22-04-2016 IPR009822 YaeQ YE3261 c743e034bddb42f7916a891ec00bb885 182 PANTHER PTHR38784:SF1 1 182 1.8E-99 T 22-04-2016 YE3261 c743e034bddb42f7916a891ec00bb885 182 SMART SM01322 1 176 2.4E-119 T 22-04-2016 IPR009822 YaeQ YE3261 c743e034bddb42f7916a891ec00bb885 182 Gene3D G3DSA:3.10.640.10 1 179 3.2E-82 T 22-04-2016 YE3434 aa73540bb1a4d25509b3e5dbe0b5cc66 273 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 6 100 8.5E-18 T 22-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal YE3434 aa73540bb1a4d25509b3e5dbe0b5cc66 273 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 269 1.4E-68 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 YE3434 aa73540bb1a4d25509b3e5dbe0b5cc66 273 SUPERFAMILY SSF48179 163 271 3.23E-27 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 YE3434 aa73540bb1a4d25509b3e5dbe0b5cc66 273 PANTHER PTHR11645 1 271 4.1E-103 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 YE3434 aa73540bb1a4d25509b3e5dbe0b5cc66 273 PANTHER PTHR11645:SF0 1 271 4.1E-103 T 22-04-2016 YE3434 aa73540bb1a4d25509b3e5dbe0b5cc66 273 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 269 24.622 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 YE3434 aa73540bb1a4d25509b3e5dbe0b5cc66 273 Gene3D G3DSA:3.40.50.720 4 161 7.8E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3434 aa73540bb1a4d25509b3e5dbe0b5cc66 273 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 224 247 - T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 YE3434 aa73540bb1a4d25509b3e5dbe0b5cc66 273 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 164 269 3.9E-28 T 22-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 YE3434 aa73540bb1a4d25509b3e5dbe0b5cc66 273 SUPERFAMILY SSF51735 4 162 1.37E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3434 aa73540bb1a4d25509b3e5dbe0b5cc66 273 Gene3D G3DSA:1.10.3730.10 164 269 2.9E-27 T 22-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 YE3434 aa73540bb1a4d25509b3e5dbe0b5cc66 273 PIRSF PIRSF000193 3 271 8.6E-74 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 YE1252 ba7df53fd0706c6cb2395af30f6ec97c 308 SUPERFAMILY SSF53474 28 305 9.87E-50 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE1252 ba7df53fd0706c6cb2395af30f6ec97c 308 PANTHER PTHR23024:SF47 28 282 1.6E-48 T 22-04-2016 YE1252 ba7df53fd0706c6cb2395af30f6ec97c 308 Pfam PF07859 alpha/beta hydrolase fold 63 266 5.4E-23 T 22-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 YE1252 ba7df53fd0706c6cb2395af30f6ec97c 308 PANTHER PTHR23024 28 282 1.6E-48 T 22-04-2016 YE1252 ba7df53fd0706c6cb2395af30f6ec97c 308 Gene3D G3DSA:3.40.50.1820 32 304 3.5E-63 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE0011 7abfa091301308b02869462834f208fd 295 Gene3D G3DSA:3.40.50.2300 139 295 2.9E-55 T 22-04-2016 YE0011 7abfa091301308b02869462834f208fd 295 Pfam PF13407 Periplasmic binding protein domain 29 281 4.8E-61 T 22-04-2016 IPR025997 Periplasmic binding protein YE0011 7abfa091301308b02869462834f208fd 295 SUPERFAMILY SSF53822 7 295 7.07E-88 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YE0011 7abfa091301308b02869462834f208fd 295 PANTHER PTHR32196 7 295 6.1E-108 T 22-04-2016 YE0011 7abfa091301308b02869462834f208fd 295 Gene3D G3DSA:3.40.50.2300 27 138 1.7E-41 T 22-04-2016 YE0011 7abfa091301308b02869462834f208fd 295 PANTHER PTHR32196:SF9 7 295 6.1E-108 T 22-04-2016 YE3951 c33d9daa45b07a77589e738161e6976f 326 PANTHER PTHR10794:SF46 1 324 2.0E-92 T 22-04-2016 YE3951 c33d9daa45b07a77589e738161e6976f 326 Pfam PF00561 alpha/beta hydrolase fold 60 299 1.4E-18 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 YE3951 c33d9daa45b07a77589e738161e6976f 326 SUPERFAMILY SSF53474 26 306 1.85E-41 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE3951 c33d9daa45b07a77589e738161e6976f 326 PIRSF PIRSF005211 1 326 1.2E-101 T 22-04-2016 IPR012020 AB hydrolase 4 family KEGG: 00051+3.1.1.-|KEGG: 00053+3.1.1.-|KEGG: 00363+3.1.1.-|KEGG: 00365+3.1.1.-|KEGG: 00534+3.1.1.-|KEGG: 00564+3.1.1.-|KEGG: 00623+3.1.1.-|KEGG: 00640+3.1.1.-|KEGG: 00830+3.1.1.-|KEGG: 00900+3.1.1.-|KEGG: 00940+3.1.1.-|KEGG: 00960+3.1.1.- YE3951 c33d9daa45b07a77589e738161e6976f 326 Gene3D G3DSA:3.40.50.1820 41 171 2.9E-30 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE3951 c33d9daa45b07a77589e738161e6976f 326 Gene3D G3DSA:3.40.50.1820 247 323 2.9E-30 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE3951 c33d9daa45b07a77589e738161e6976f 326 PANTHER PTHR10794 1 324 2.0E-92 T 22-04-2016 YE3951 c33d9daa45b07a77589e738161e6976f 326 ProSitePatterns PS01133 Uncharacterized protein family UPF0017 signature. 226 267 - T 22-04-2016 IPR000952 AB hydrolase 4, conserved site KEGG: 00051+3.1.1.-|KEGG: 00053+3.1.1.-|KEGG: 00363+3.1.1.-|KEGG: 00365+3.1.1.-|KEGG: 00534+3.1.1.-|KEGG: 00564+3.1.1.-|KEGG: 00623+3.1.1.-|KEGG: 00640+3.1.1.-|KEGG: 00830+3.1.1.-|KEGG: 00900+3.1.1.-|KEGG: 00940+3.1.1.-|KEGG: 00960+3.1.1.- YE2742 403d85eb9b5b30dd4b855d53f5a78390 371 PANTHER PTHR11496 1 371 5.4E-187 T 22-04-2016 YE2742 403d85eb9b5b30dd4b855d53f5a78390 371 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 362 2.3E-109 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 YE2742 403d85eb9b5b30dd4b855d53f5a78390 371 SUPERFAMILY SSF56796 2 369 3.53E-107 T 22-04-2016 YE2742 403d85eb9b5b30dd4b855d53f5a78390 371 Gene3D G3DSA:1.20.1090.10 166 370 3.0E-66 T 22-04-2016 YE2742 403d85eb9b5b30dd4b855d53f5a78390 371 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 154 182 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 YE2742 403d85eb9b5b30dd4b855d53f5a78390 371 Gene3D G3DSA:3.40.50.1970 1 165 1.5E-47 T 22-04-2016 YE2742 403d85eb9b5b30dd4b855d53f5a78390 371 PANTHER PTHR11496:SF71 1 371 5.4E-187 T 22-04-2016 YE0926 113404545f9c6196369de3e7d1985eda 323 TIGRFAM TIGR04171 RNR_1b_NrdF: ribonucleoside-diphosphate reductase, class 1b, beta subunit 11 323 4.7E-146 T 22-04-2016 IPR026494 Ribonucleoside reductase subunit beta, NrdF GO:0005971|GO:0009263 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 YE0926 113404545f9c6196369de3e7d1985eda 323 Pfam PF00268 Ribonucleotide reductase, small chain 13 283 9.7E-86 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 YE0926 113404545f9c6196369de3e7d1985eda 323 PANTHER PTHR23409 13 319 1.6E-114 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 YE0926 113404545f9c6196369de3e7d1985eda 323 Gene3D G3DSA:1.10.620.20 9 284 2.2E-92 T 22-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 YE0926 113404545f9c6196369de3e7d1985eda 323 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 101 117 - T 22-04-2016 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 YE0926 113404545f9c6196369de3e7d1985eda 323 SUPERFAMILY SSF47240 9 323 2.03E-106 T 22-04-2016 IPR009078 Ferritin-like superfamily YE0926 113404545f9c6196369de3e7d1985eda 323 PIRSF PIRSF000355 2 320 7.9E-84 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 YE0348 57eae68f7493de3c9d36db54c983e941 578 ProSitePatterns PS00194 Thioredoxin family active site. 485 503 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 YE0348 57eae68f7493de3c9d36db54c983e941 578 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 184 389 8.0E-21 T 22-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 YE0348 57eae68f7493de3c9d36db54c983e941 578 SUPERFAMILY SSF74863 38 152 1.06E-40 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain YE0348 57eae68f7493de3c9d36db54c983e941 578 Gene3D G3DSA:2.60.40.1250 36 152 7.1E-45 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain YE0348 57eae68f7493de3c9d36db54c983e941 578 SUPERFAMILY SSF52833 464 575 1.07E-23 T 22-04-2016 IPR012336 Thioredoxin-like fold YE0348 57eae68f7493de3c9d36db54c983e941 578 Gene3D G3DSA:3.40.30.10 466 575 2.6E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold YE0348 57eae68f7493de3c9d36db54c983e941 578 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 577 40.587 T 22-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 YE0348 57eae68f7493de3c9d36db54c983e941 578 Pfam PF13899 Thioredoxin-like 475 550 3.7E-13 T 22-04-2016 YE0348 57eae68f7493de3c9d36db54c983e941 578 PANTHER PTHR32234 3 578 7.3E-244 T 22-04-2016 YE0348 57eae68f7493de3c9d36db54c983e941 578 PANTHER PTHR32234:SF0 3 578 7.3E-244 T 22-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 YE0348 57eae68f7493de3c9d36db54c983e941 578 Pfam PF11412 Disulphide bond corrector protein DsbC 39 149 4.8E-34 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain YE2001 7d46a29e05bb1ca6b39e71289a091f44 500 Pfam PF11762 L-arabinose isomerase C-terminal domain 363 476 2.0E-46 T 22-04-2016 IPR024664 L-arabinose isomerase, C-terminal KEGG: 00040+5.3.1.4|UniPathway: UPA00145 YE2001 7d46a29e05bb1ca6b39e71289a091f44 500 Pfam PF02610 L-arabinose isomerase 5 359 1.8E-177 T 22-04-2016 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4|UniPathway: UPA00145 YE2001 7d46a29e05bb1ca6b39e71289a091f44 500 Hamap MF_00519 L-arabinose isomerase [araA]. 1 477 64.511 T 22-04-2016 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4|UniPathway: UPA00145 YE2001 7d46a29e05bb1ca6b39e71289a091f44 500 SUPERFAMILY SSF53743 1 326 7.59E-123 T 22-04-2016 IPR009015 L-fucose isomerase, N-terminal/central domain GO:0005737|GO:0005996|GO:0016861 YE2001 7d46a29e05bb1ca6b39e71289a091f44 500 PIRSF PIRSF001478 1 500 3.4E-258 T 22-04-2016 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4|UniPathway: UPA00145 YE2001 7d46a29e05bb1ca6b39e71289a091f44 500 ProDom PD018364 ISOMERASE L-ARABINOSE ARABINOSE METABOLISM CARBOHYDRATE CATABOLISM ARAA 1 304 9.0E-164 T 22-04-2016 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4|UniPathway: UPA00145 YE2001 7d46a29e05bb1ca6b39e71289a091f44 500 PANTHER PTHR38464:SF1 2 500 4.2E-242 T 22-04-2016 YE2001 7d46a29e05bb1ca6b39e71289a091f44 500 SUPERFAMILY SSF50443 329 498 1.6E-71 T 22-04-2016 IPR004216 L-fucose/L-arabinose isomerase, C-terminal YE2001 7d46a29e05bb1ca6b39e71289a091f44 500 PANTHER PTHR38464 2 500 4.2E-242 T 22-04-2016 YE2732 d910ff565232a81e56ec48be76f362aa 174 SUPERFAMILY SSF47148 40 174 1.31E-59 T 22-04-2016 IPR003207 Propanediol/glycerol dehydratase, small subunit KEGG: 00640+4.2.1.28|MetaCyc: PWY-7013|UniPathway: UPA00621 YE2732 d910ff565232a81e56ec48be76f362aa 174 Pfam PF02287 Dehydratase small subunit 40 171 4.3E-59 T 22-04-2016 IPR003207 Propanediol/glycerol dehydratase, small subunit KEGG: 00640+4.2.1.28|MetaCyc: PWY-7013|UniPathway: UPA00621 YE2732 d910ff565232a81e56ec48be76f362aa 174 PIRSF PIRSF018505 1 174 2.9E-72 T 22-04-2016 IPR003207 Propanediol/glycerol dehydratase, small subunit KEGG: 00640+4.2.1.28|MetaCyc: PWY-7013|UniPathway: UPA00621 YE2762 0efe86b1de46ddc1869166f907eab3dd 503 ProSitePatterns PS00211 ABC transporters family signature. 402 416 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE2762 0efe86b1de46ddc1869166f907eab3dd 503 Gene3D G3DSA:3.40.50.300 264 490 1.5E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2762 0efe86b1de46ddc1869166f907eab3dd 503 SUPERFAMILY SSF52540 8 234 6.98E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2762 0efe86b1de46ddc1869166f907eab3dd 503 PANTHER PTHR24220:SF308 10 384 5.8E-131 T 22-04-2016 YE2762 0efe86b1de46ddc1869166f907eab3dd 503 Gene3D G3DSA:3.40.50.300 8 240 1.1E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2762 0efe86b1de46ddc1869166f907eab3dd 503 Pfam PF00005 ABC transporter 24 175 2.0E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE2762 0efe86b1de46ddc1869166f907eab3dd 503 Pfam PF00005 ABC transporter 275 429 3.2E-18 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE2762 0efe86b1de46ddc1869166f907eab3dd 503 SUPERFAMILY SSF52540 269 488 5.33E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2762 0efe86b1de46ddc1869166f907eab3dd 503 PANTHER PTHR24220 10 384 5.8E-131 T 22-04-2016 YE2762 0efe86b1de46ddc1869166f907eab3dd 503 SMART SM00382 284 480 1.4E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain YE2762 0efe86b1de46ddc1869166f907eab3dd 503 SMART SM00382 33 223 6.6E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain YE2834 18741b5d45acab38640dc9bd58d2f9cb 230 PANTHER PTHR10992 6 228 2.4E-37 T 22-04-2016 YE2834 18741b5d45acab38640dc9bd58d2f9cb 230 Gene3D G3DSA:3.40.50.1820 6 227 1.3E-35 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE2834 18741b5d45acab38640dc9bd58d2f9cb 230 SUPERFAMILY SSF53474 7 224 6.72E-30 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE2834 18741b5d45acab38640dc9bd58d2f9cb 230 Pfam PF12697 Alpha/beta hydrolase family 7 220 1.2E-17 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 YE2834 18741b5d45acab38640dc9bd58d2f9cb 230 PANTHER PTHR10992:SF832 6 228 2.4E-37 T 22-04-2016 YE0216 de58f9635d198f16352926e44aaa8b20 226 PANTHER PTHR34300:SF1 1 223 3.5E-132 T 22-04-2016 YE0216 de58f9635d198f16352926e44aaa8b20 226 Pfam PF02592 Putative vitamin uptake transporter 43 198 1.4E-32 T 22-04-2016 IPR003744 Protein of unknown function DUF165 YE0216 de58f9635d198f16352926e44aaa8b20 226 PANTHER PTHR34300 1 223 3.5E-132 T 22-04-2016 YE0216 de58f9635d198f16352926e44aaa8b20 226 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 12 205 9.4E-62 T 22-04-2016 IPR003744 Protein of unknown function DUF165 YE1506 82a75c56bf3179ba2ce4dd3f5718ecdf 295 Pfam PF04072 Leucine carboxyl methyltransferase 17 196 2.9E-30 T 22-04-2016 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- YE1506 82a75c56bf3179ba2ce4dd3f5718ecdf 295 TIGRFAM TIGR00027 mthyl_TIGR00027: methyltransferase, TIGR00027 family 13 273 5.0E-37 T 22-04-2016 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative GO:0008168 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- YE1506 82a75c56bf3179ba2ce4dd3f5718ecdf 295 Gene3D G3DSA:3.40.50.150 55 211 4.4E-14 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE1506 82a75c56bf3179ba2ce4dd3f5718ecdf 295 SUPERFAMILY SSF53335 10 285 5.4E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE1506 82a75c56bf3179ba2ce4dd3f5718ecdf 295 PANTHER PTHR13600:SF12 25 273 1.2E-31 T 22-04-2016 YE1506 82a75c56bf3179ba2ce4dd3f5718ecdf 295 PANTHER PTHR13600 25 273 1.2E-31 T 22-04-2016 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- YE0805 4f62a588c40090a10772aea7d4d2c979 427 SUPERFAMILY SSF55031 220 317 2.09E-22 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain YE0805 4f62a588c40090a10772aea7d4d2c979 427 Pfam PF01546 Peptidase family M20/M25/M40 86 406 5.0E-29 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 YE0805 4f62a588c40090a10772aea7d4d2c979 427 SUPERFAMILY SSF53187 13 229 1.39E-80 T 22-04-2016 YE0805 4f62a588c40090a10772aea7d4d2c979 427 SUPERFAMILY SSF53187 340 412 1.39E-80 T 22-04-2016 YE0805 4f62a588c40090a10772aea7d4d2c979 427 PIRSF PIRSF001235 12 413 6.4E-114 T 22-04-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 YE0805 4f62a588c40090a10772aea7d4d2c979 427 Gene3D G3DSA:3.40.630.10 352 411 3.5E-105 T 22-04-2016 YE0805 4f62a588c40090a10772aea7d4d2c979 427 Gene3D G3DSA:3.40.630.10 13 232 3.5E-105 T 22-04-2016 YE0805 4f62a588c40090a10772aea7d4d2c979 427 Pfam PF07687 Peptidase dimerisation domain 217 316 1.2E-6 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain YE0805 4f62a588c40090a10772aea7d4d2c979 427 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 16 407 1.1E-113 T 22-04-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 YE0805 4f62a588c40090a10772aea7d4d2c979 427 PANTHER PTHR32494 13 417 9.1E-133 T 22-04-2016 YE0805 4f62a588c40090a10772aea7d4d2c979 427 Gene3D G3DSA:3.30.70.360 233 316 2.5E-30 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain YE0648 0885438da4c451fc64644036a7b9a91c 393 PANTHER PTHR23535 2 392 5.4E-178 T 22-04-2016 YE0648 0885438da4c451fc64644036a7b9a91c 393 SUPERFAMILY SSF103473 10 391 1.44E-47 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE0648 0885438da4c451fc64644036a7b9a91c 393 Gene3D G3DSA:1.20.1250.20 216 392 7.8E-22 T 22-04-2016 YE0648 0885438da4c451fc64644036a7b9a91c 393 Gene3D G3DSA:1.20.1250.20 12 197 2.0E-21 T 22-04-2016 YE0648 0885438da4c451fc64644036a7b9a91c 393 TIGRFAM TIGR00899 2A0120: sugar efflux transporter 17 391 3.4E-159 T 22-04-2016 IPR004750 Sugar efflux GO:0008643|GO:0015542|GO:0016021 YE0648 0885438da4c451fc64644036a7b9a91c 393 Pfam PF07690 Major Facilitator Superfamily 19 355 1.9E-31 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YE0648 0885438da4c451fc64644036a7b9a91c 393 PANTHER PTHR23535:SF2 2 392 5.4E-178 T 22-04-2016 YE2871 7e71dd32939407c55d073b27a08b7ace 358 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 42 351 3.9E-129 T 22-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC YE2871 7e71dd32939407c55d073b27a08b7ace 358 PANTHER PTHR30482 116 357 3.3E-194 T 22-04-2016 YE2871 7e71dd32939407c55d073b27a08b7ace 358 PANTHER PTHR30482 1 94 3.3E-194 T 22-04-2016 YE2871 7e71dd32939407c55d073b27a08b7ace 358 Pfam PF02653 Branched-chain amino acid transport system / permease component 52 340 9.9E-40 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YE2871 7e71dd32939407c55d073b27a08b7ace 358 PANTHER PTHR30482:SF4 116 357 3.3E-194 T 22-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC YE2871 7e71dd32939407c55d073b27a08b7ace 358 PANTHER PTHR30482:SF4 1 94 3.3E-194 T 22-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC YE0970 cc2c8e3dd2f29aebd9d784fe17597302 115 PIRSF PIRSF000699 11 115 1.2E-39 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YE0970 cc2c8e3dd2f29aebd9d784fe17597302 115 Gene3D G3DSA:1.20.58.80 15 114 8.4E-42 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YE0970 cc2c8e3dd2f29aebd9d784fe17597302 115 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 20 112 7.1E-34 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YE0970 cc2c8e3dd2f29aebd9d784fe17597302 115 PANTHER PTHR34382 8 114 9.1E-52 T 22-04-2016 YE0970 cc2c8e3dd2f29aebd9d784fe17597302 115 PANTHER PTHR34382:SF2 8 114 9.1E-52 T 22-04-2016 YE0970 cc2c8e3dd2f29aebd9d784fe17597302 115 SUPERFAMILY SSF46973 15 113 4.05E-35 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YE4156 5e5a256d7ebc484f11a260a271158293 219 Pfam PF13488 Glycine zipper 38 85 1.6E-11 T 22-04-2016 YE4156 5e5a256d7ebc484f11a260a271158293 219 PRINTS PR01021 OMPA domain signature 116 138 8.9E-14 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YE4156 5e5a256d7ebc484f11a260a271158293 219 PRINTS PR01021 OMPA domain signature 161 177 8.9E-14 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YE4156 5e5a256d7ebc484f11a260a271158293 219 PRINTS PR01021 OMPA domain signature 146 161 8.9E-14 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YE4156 5e5a256d7ebc484f11a260a271158293 219 Pfam PF00691 OmpA family 115 210 1.3E-21 T 22-04-2016 IPR006665 OmpA-like domain YE4156 5e5a256d7ebc484f11a260a271158293 219 SUPERFAMILY SSF103088 103 218 5.89E-37 T 22-04-2016 IPR006665 OmpA-like domain YE4156 5e5a256d7ebc484f11a260a271158293 219 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 199 219 3.4E-7 T 22-04-2016 YE4156 5e5a256d7ebc484f11a260a271158293 219 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 179 198 3.4E-7 T 22-04-2016 YE4156 5e5a256d7ebc484f11a260a271158293 219 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 132 158 3.4E-7 T 22-04-2016 YE4156 5e5a256d7ebc484f11a260a271158293 219 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 161 178 3.4E-7 T 22-04-2016 YE4156 5e5a256d7ebc484f11a260a271158293 219 PANTHER PTHR30128 13 219 6.5E-73 T 22-04-2016 YE4156 5e5a256d7ebc484f11a260a271158293 219 Gene3D G3DSA:3.30.1330.60 96 216 9.8E-39 T 22-04-2016 IPR006665 OmpA-like domain YE0703 7b654d19102a6cbe21238aef638024e4 337 Gene3D G3DSA:1.10.10.60 286 330 1.1E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE0703 7b654d19102a6cbe21238aef638024e4 337 PANTHER PTHR11019:SF61 230 330 1.5E-21 T 22-04-2016 YE0703 7b654d19102a6cbe21238aef638024e4 337 SMART SM00342 247 330 5.4E-23 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YE0703 7b654d19102a6cbe21238aef638024e4 337 SUPERFAMILY SSF46689 283 331 5.02E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE0703 7b654d19102a6cbe21238aef638024e4 337 SUPERFAMILY SSF46689 230 281 1.85E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE0703 7b654d19102a6cbe21238aef638024e4 337 PANTHER PTHR11019 230 330 1.5E-21 T 22-04-2016 YE0703 7b654d19102a6cbe21238aef638024e4 337 Gene3D G3DSA:1.10.10.60 231 285 2.2E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE0703 7b654d19102a6cbe21238aef638024e4 337 Pfam PF12833 Helix-turn-helix domain 253 330 2.6E-19 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YE3199 817392635646b2613fc99fa313bc1d48 514 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 452 469 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 YE3199 817392635646b2613fc99fa313bc1d48 514 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 404 499 1.4E-18 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YE3199 817392635646b2613fc99fa313bc1d48 514 Pfam PF02378 Phosphotransferase system, EIIC 10 341 3.2E-62 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 YE3199 817392635646b2613fc99fa313bc1d48 514 SUPERFAMILY SSF55604 439 514 6.67E-20 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YE3199 817392635646b2613fc99fa313bc1d48 514 PANTHER PTHR30009 2 514 2.8E-208 T 22-04-2016 YE3199 817392635646b2613fc99fa313bc1d48 514 TIGRFAM TIGR02005 PTS-IIBC-alpha: PTS system, alpha-glucoside-specific IIBC component 3 513 7.3E-218 T 22-04-2016 IPR010975 Phosphotransferase system, alpha-glucoside-specific IIBC component GO:0008982|GO:0009401 YE3199 817392635646b2613fc99fa313bc1d48 514 Gene3D G3DSA:3.30.1360.60 435 513 3.2E-24 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YE3199 817392635646b2613fc99fa313bc1d48 514 PANTHER PTHR30009:SF12 2 514 2.8E-208 T 22-04-2016 YE3199 817392635646b2613fc99fa313bc1d48 514 Pfam PF00367 phosphotransferase system, EIIB 443 473 1.7E-13 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 YE0745 f2137e55e7680a6bcfd4e411126055de 280 Gene3D G3DSA:1.10.287.1080 29 83 3.1E-8 T 22-04-2016 YE0745 f2137e55e7680a6bcfd4e411126055de 280 Gene3D G3DSA:1.10.287.1080 149 236 9.4E-12 T 22-04-2016 YE0745 f2137e55e7680a6bcfd4e411126055de 280 TIGRFAM TIGR00444 mazG: MazG family protein 21 274 2.7E-107 T 22-04-2016 IPR011551 NTP pyrophosphohydrolase MazG YE0745 f2137e55e7680a6bcfd4e411126055de 280 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 38 111 1.1E-27 T 22-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core YE0745 f2137e55e7680a6bcfd4e411126055de 280 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 185 246 1.8E-6 T 22-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core YE0745 f2137e55e7680a6bcfd4e411126055de 280 SUPERFAMILY SSF101386 153 253 3.36E-23 T 22-04-2016 YE0745 f2137e55e7680a6bcfd4e411126055de 280 PANTHER PTHR30522 13 280 1.1E-133 T 22-04-2016 YE0745 f2137e55e7680a6bcfd4e411126055de 280 PANTHER PTHR30522:SF0 13 280 1.1E-133 T 22-04-2016 IPR011551 NTP pyrophosphohydrolase MazG YE0745 f2137e55e7680a6bcfd4e411126055de 280 SUPERFAMILY SSF101386 14 114 4.49E-25 T 22-04-2016 YE2608 b5f9e6974babe273532fdf4f0c45d4f5 522 SMART SM00382 292 486 0.032 T 22-04-2016 IPR003593 AAA+ ATPase domain YE2608 b5f9e6974babe273532fdf4f0c45d4f5 522 SMART SM00382 39 231 2.8E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain YE2608 b5f9e6974babe273532fdf4f0c45d4f5 522 Gene3D G3DSA:3.40.50.300 280 500 1.1E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2608 b5f9e6974babe273532fdf4f0c45d4f5 522 Gene3D G3DSA:3.40.50.300 15 237 1.2E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2608 b5f9e6974babe273532fdf4f0c45d4f5 522 PANTHER PTHR24220:SF416 16 392 4.9E-126 T 22-04-2016 YE2608 b5f9e6974babe273532fdf4f0c45d4f5 522 Pfam PF00005 ABC transporter 285 437 4.5E-19 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE2608 b5f9e6974babe273532fdf4f0c45d4f5 522 Pfam PF00005 ABC transporter 33 182 5.0E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE2608 b5f9e6974babe273532fdf4f0c45d4f5 522 SUPERFAMILY SSF52540 265 498 2.09E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2608 b5f9e6974babe273532fdf4f0c45d4f5 522 PANTHER PTHR24220 16 392 4.9E-126 T 22-04-2016 YE2608 b5f9e6974babe273532fdf4f0c45d4f5 522 SUPERFAMILY SSF52540 15 237 6.53E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2608 b5f9e6974babe273532fdf4f0c45d4f5 522 ProSitePatterns PS00211 ABC transporters family signature. 410 424 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE4168 508a0471a5b226eb51491241daf794ef 312 PANTHER PTHR13812:SF19 1 310 4.4E-69 T 22-04-2016 YE4168 508a0471a5b226eb51491241daf794ef 312 PANTHER PTHR13812 1 310 4.4E-69 T 22-04-2016 YE4168 508a0471a5b226eb51491241daf794ef 312 SUPERFAMILY SSF51735 1 306 4.81E-70 T 22-04-2016 IPR016040 NAD(P)-binding domain YE4168 508a0471a5b226eb51491241daf794ef 312 Gene3D G3DSA:3.40.50.720 139 297 4.1E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain YE4168 508a0471a5b226eb51491241daf794ef 312 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 6 307 1.1E-59 T 22-04-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin YE4168 508a0471a5b226eb51491241daf794ef 312 PIRSF PIRSF001439 1 310 5.5E-54 T 22-04-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin YE4168 508a0471a5b226eb51491241daf794ef 312 Gene3D G3DSA:3.30.1780.10 1 138 2.9E-34 T 22-04-2016 IPR023401 Ornithine cyclodeaminase, N-terminal YE0068 b659c04db983a437abfa6f383aabdce4 260 Pfam PF00535 Glycosyl transferase family 2 8 141 1.9E-20 T 22-04-2016 IPR001173 Glycosyltransferase 2-like YE0068 b659c04db983a437abfa6f383aabdce4 260 PANTHER PTHR10859:SF99 4 132 1.1E-33 T 22-04-2016 YE0068 b659c04db983a437abfa6f383aabdce4 260 Gene3D G3DSA:3.90.550.10 3 114 3.5E-16 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YE0068 b659c04db983a437abfa6f383aabdce4 260 SUPERFAMILY SSF53448 3 149 1.31E-28 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YE0068 b659c04db983a437abfa6f383aabdce4 260 PANTHER PTHR10859 4 132 1.1E-33 T 22-04-2016 YE4144 e924dcb68af93becf73ea753987524c7 493 SUPERFAMILY SSF53383 99 467 6.83E-81 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YE4144 e924dcb68af93becf73ea753987524c7 493 SMART SM00345 13 72 3.9E-15 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YE4144 e924dcb68af93becf73ea753987524c7 493 PANTHER PTHR11751:SF314 87 465 1.0E-114 T 22-04-2016 YE4144 e924dcb68af93becf73ea753987524c7 493 Gene3D G3DSA:1.10.10.10 9 73 1.4E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE4144 e924dcb68af93becf73ea753987524c7 493 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 72 1.2E-13 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YE4144 e924dcb68af93becf73ea753987524c7 493 SUPERFAMILY SSF46785 9 76 4.69E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE4144 e924dcb68af93becf73ea753987524c7 493 Pfam PF00155 Aminotransferase class I and II 142 449 6.0E-24 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YE4144 e924dcb68af93becf73ea753987524c7 493 Gene3D G3DSA:3.90.1150.10 364 466 4.6E-6 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YE4144 e924dcb68af93becf73ea753987524c7 493 Gene3D G3DSA:3.40.640.10 136 360 2.2E-57 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YE4144 e924dcb68af93becf73ea753987524c7 493 PANTHER PTHR11751 87 465 1.0E-114 T 22-04-2016 YE4140 3368e44d6732eff2c7ef0e56d066e1e6 223 Pfam PF03475 3-alpha domain 170 211 2.0E-14 T 22-04-2016 IPR005163 3-alpha domain YE4140 3368e44d6732eff2c7ef0e56d066e1e6 223 PANTHER PTHR30212:SF2 20 222 2.5E-73 T 22-04-2016 YE4140 3368e44d6732eff2c7ef0e56d066e1e6 223 PANTHER PTHR30212 20 222 2.5E-73 T 22-04-2016 YE4140 3368e44d6732eff2c7ef0e56d066e1e6 223 Pfam PF03473 MOSC domain 46 159 1.0E-20 T 22-04-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 YE4140 3368e44d6732eff2c7ef0e56d066e1e6 223 SUPERFAMILY SSF50800 3 222 4.92E-73 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain YE4140 3368e44d6732eff2c7ef0e56d066e1e6 223 Gene3D G3DSA:2.40.33.20 1 222 2.1E-84 T 22-04-2016 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like YE1237 6fe1abe8dacb388f26db3e9132be13ad 176 Pfam PF09900 Predicted membrane protein (DUF2127) 23 161 2.0E-31 T 22-04-2016 IPR021125 Protein of unknown function DUF2127 YE1237 6fe1abe8dacb388f26db3e9132be13ad 176 PIRSF PIRSF034455 3 171 1.9E-50 T 22-04-2016 IPR014591 Uncharacterised conserved protein UCP034455 YE1248 207e12e4f7478ba9f19dd981ae767f98 267 PANTHER PTHR24220 11 250 2.5E-136 T 22-04-2016 YE1248 207e12e4f7478ba9f19dd981ae767f98 267 Pfam PF00005 ABC transporter 26 175 5.7E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE1248 207e12e4f7478ba9f19dd981ae767f98 267 SMART SM00382 34 223 1.1E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain YE1248 207e12e4f7478ba9f19dd981ae767f98 267 PANTHER PTHR24220:SF483 11 250 2.5E-136 T 22-04-2016 YE1248 207e12e4f7478ba9f19dd981ae767f98 267 SUPERFAMILY SSF52540 8 245 5.21E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1248 207e12e4f7478ba9f19dd981ae767f98 267 Gene3D G3DSA:3.40.50.300 3 239 1.2E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3979 70f2635f3064cb5202cd5f89b2644c19 851 SUPERFAMILY SSF56601 422 610 3.55E-114 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YE3979 70f2635f3064cb5202cd5f89b2644c19 851 SUPERFAMILY SSF56601 211 233 3.55E-114 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YE3979 70f2635f3064cb5202cd5f89b2644c19 851 SUPERFAMILY SSF56601 262 313 3.55E-114 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YE3979 70f2635f3064cb5202cd5f89b2644c19 851 SUPERFAMILY SSF56601 672 834 3.55E-114 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YE3979 70f2635f3064cb5202cd5f89b2644c19 851 Gene3D G3DSA:2.40.50.140 347 421 8.4E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE3979 70f2635f3064cb5202cd5f89b2644c19 851 PANTHER PTHR32282:SF5 767 844 1.2E-292 T 22-04-2016 YE3979 70f2635f3064cb5202cd5f89b2644c19 851 Gene3D G3DSA:1.10.3810.10 55 232 2.6E-76 T 22-04-2016 YE3979 70f2635f3064cb5202cd5f89b2644c19 851 Gene3D G3DSA:3.40.710.10 422 613 1.3E-133 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YE3979 70f2635f3064cb5202cd5f89b2644c19 851 Gene3D G3DSA:3.40.710.10 673 833 1.3E-133 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YE3979 70f2635f3064cb5202cd5f89b2644c19 851 Gene3D G3DSA:3.40.710.10 233 313 1.3E-133 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YE3979 70f2635f3064cb5202cd5f89b2644c19 851 PANTHER PTHR32282 2 310 1.2E-292 T 22-04-2016 YE3979 70f2635f3064cb5202cd5f89b2644c19 851 Pfam PF00912 Transglycosylase 55 229 1.7E-65 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 YE3979 70f2635f3064cb5202cd5f89b2644c19 851 PANTHER PTHR32282 421 612 1.2E-292 T 22-04-2016 YE3979 70f2635f3064cb5202cd5f89b2644c19 851 Pfam PF00905 Penicillin binding protein transpeptidase domain 429 608 1.1E-23 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 YE3979 70f2635f3064cb5202cd5f89b2644c19 851 Pfam PF17092 Penicillin-binding protein OB-like domain 316 425 8.3E-32 T 22-04-2016 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00230+2.4.2.-|KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00514+2.4.2.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.-|UniPathway: UPA00219 YE3979 70f2635f3064cb5202cd5f89b2644c19 851 SUPERFAMILY SSF53955 43 257 1.66E-80 T 22-04-2016 IPR023346 Lysozyme-like domain YE3979 70f2635f3064cb5202cd5f89b2644c19 851 PANTHER PTHR32282:SF5 672 751 1.2E-292 T 22-04-2016 YE3979 70f2635f3064cb5202cd5f89b2644c19 851 PANTHER PTHR32282:SF5 2 310 1.2E-292 T 22-04-2016 YE3979 70f2635f3064cb5202cd5f89b2644c19 851 PANTHER PTHR32282 767 844 1.2E-292 T 22-04-2016 YE3979 70f2635f3064cb5202cd5f89b2644c19 851 PANTHER PTHR32282 672 751 1.2E-292 T 22-04-2016 YE3979 70f2635f3064cb5202cd5f89b2644c19 851 PANTHER PTHR32282:SF5 421 612 1.2E-292 T 22-04-2016 YE3979 70f2635f3064cb5202cd5f89b2644c19 851 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 65 786 5.2E-173 T 22-04-2016 YE1054 0ecdae517b56a7a69b75c945ca1259e5 268 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 22-04-2016 IPR020583 Inositol monophosphatase, metal-binding site YE1054 0ecdae517b56a7a69b75c945ca1259e5 268 Gene3D G3DSA:3.30.540.10 2 152 1.8E-51 T 22-04-2016 YE1054 0ecdae517b56a7a69b75c945ca1259e5 268 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 2.0E-37 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 YE1054 0ecdae517b56a7a69b75c945ca1259e5 268 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 2.0E-37 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 YE1054 0ecdae517b56a7a69b75c945ca1259e5 268 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 2.0E-37 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 YE1054 0ecdae517b56a7a69b75c945ca1259e5 268 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 2.0E-37 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 YE1054 0ecdae517b56a7a69b75c945ca1259e5 268 PANTHER PTHR20854:SF4 1 265 6.9E-107 T 22-04-2016 YE1054 0ecdae517b56a7a69b75c945ca1259e5 268 Pfam PF00459 Inositol monophosphatase family 2 259 9.2E-71 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 YE1054 0ecdae517b56a7a69b75c945ca1259e5 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 2.2E-59 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 YE1054 0ecdae517b56a7a69b75c945ca1259e5 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 2.2E-59 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 YE1054 0ecdae517b56a7a69b75c945ca1259e5 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 2.2E-59 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 YE1054 0ecdae517b56a7a69b75c945ca1259e5 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 2.2E-59 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 YE1054 0ecdae517b56a7a69b75c945ca1259e5 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 2.2E-59 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 YE1054 0ecdae517b56a7a69b75c945ca1259e5 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 2.2E-59 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 YE1054 0ecdae517b56a7a69b75c945ca1259e5 268 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 22-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 YE1054 0ecdae517b56a7a69b75c945ca1259e5 268 PANTHER PTHR20854 1 265 6.9E-107 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 YE1054 0ecdae517b56a7a69b75c945ca1259e5 268 Gene3D G3DSA:3.40.190.80 153 259 6.7E-38 T 22-04-2016 YE1054 0ecdae517b56a7a69b75c945ca1259e5 268 SUPERFAMILY SSF56655 1 257 4.84E-85 T 22-04-2016 YE3435 5ba2db9a8f7898d3cec7fd6ad11d9d76 184 PANTHER PTHR33219:SF5 3 184 9.3E-90 T 22-04-2016 YE3435 5ba2db9a8f7898d3cec7fd6ad11d9d76 184 PANTHER PTHR33219 3 184 9.3E-90 T 22-04-2016 YE3435 5ba2db9a8f7898d3cec7fd6ad11d9d76 184 Pfam PF02325 YGGT family 108 171 5.2E-19 T 22-04-2016 IPR003425 CCB3/YggT GO:0016020 YE3435 5ba2db9a8f7898d3cec7fd6ad11d9d76 184 Pfam PF02325 YGGT family 10 76 2.7E-21 T 22-04-2016 IPR003425 CCB3/YggT GO:0016020 YE3066 78e6d604ec805207c7f148526b667e20 550 PRINTS PR01607 Apyrase family signature 32 50 7.4E-62 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 YE3066 78e6d604ec805207c7f148526b667e20 550 PRINTS PR01607 Apyrase family signature 238 261 7.4E-62 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 YE3066 78e6d604ec805207c7f148526b667e20 550 PRINTS PR01607 Apyrase family signature 417 440 7.4E-62 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 YE3066 78e6d604ec805207c7f148526b667e20 550 PRINTS PR01607 Apyrase family signature 207 224 7.4E-62 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 YE3066 78e6d604ec805207c7f148526b667e20 550 PRINTS PR01607 Apyrase family signature 484 503 7.4E-62 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 YE3066 78e6d604ec805207c7f148526b667e20 550 PRINTS PR01607 Apyrase family signature 283 303 7.4E-62 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 YE3066 78e6d604ec805207c7f148526b667e20 550 ProSitePatterns PS00786 5'-nucleotidase signature 2. 109 120 - T 22-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 YE3066 78e6d604ec805207c7f148526b667e20 550 SUPERFAMILY SSF56300 27 361 6.48E-98 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like YE3066 78e6d604ec805207c7f148526b667e20 550 Pfam PF02872 5'-nucleotidase, C-terminal domain 363 509 2.5E-36 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 YE3066 78e6d604ec805207c7f148526b667e20 550 Gene3D G3DSA:3.90.780.10 364 540 1.2E-55 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 YE3066 78e6d604ec805207c7f148526b667e20 550 PANTHER PTHR11575 9 549 2.1E-234 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 YE3066 78e6d604ec805207c7f148526b667e20 550 Gene3D G3DSA:3.60.21.10 28 361 4.5E-101 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like YE3066 78e6d604ec805207c7f148526b667e20 550 ProSitePatterns PS00785 5'-nucleotidase signature 1. 34 46 - T 22-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 YE3066 78e6d604ec805207c7f148526b667e20 550 PANTHER PTHR11575:SF27 9 549 2.1E-234 T 22-04-2016 YE3066 78e6d604ec805207c7f148526b667e20 550 SUPERFAMILY SSF55816 363 542 2.35E-54 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 YE3066 78e6d604ec805207c7f148526b667e20 550 Pfam PF00149 Calcineurin-like phosphoesterase 35 254 4.8E-18 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 YE1835 827ec2d0bdec80a2cb48d5be111d975d 139 Pfam PF01381 Helix-turn-helix 17 69 1.0E-7 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YE1835 827ec2d0bdec80a2cb48d5be111d975d 139 Gene3D G3DSA:1.10.260.40 12 73 5.6E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE1835 827ec2d0bdec80a2cb48d5be111d975d 139 SUPERFAMILY SSF47413 12 76 1.83E-8 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE1835 827ec2d0bdec80a2cb48d5be111d975d 139 SMART SM00530 15 69 6.4E-6 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YE1789 498c388601e2043c69bf9802975f86d6 684 SUPERFAMILY SSF50993 2 414 1.65E-86 T 22-04-2016 YE1789 498c388601e2043c69bf9802975f86d6 684 PANTHER PTHR11757 3 683 0.0 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 YE1789 498c388601e2043c69bf9802975f86d6 684 PANTHER PTHR11757:SF3 3 683 0.0 T 22-04-2016 YE1789 498c388601e2043c69bf9802975f86d6 684 Gene3D G3DSA:3.40.50.1820 424 666 1.3E-40 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE1789 498c388601e2043c69bf9802975f86d6 684 Gene3D G3DSA:2.130.10.120 76 415 3.5E-100 T 22-04-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 YE1789 498c388601e2043c69bf9802975f86d6 684 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 5 412 8.1E-98 T 22-04-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 YE1789 498c388601e2043c69bf9802975f86d6 684 Pfam PF00326 Prolyl oligopeptidase family 469 682 4.8E-70 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 YE1789 498c388601e2043c69bf9802975f86d6 684 SUPERFAMILY SSF53474 422 663 4.46E-48 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE1789 498c388601e2043c69bf9802975f86d6 684 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 614 636 5.7E-55 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 YE1789 498c388601e2043c69bf9802975f86d6 684 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 480 504 5.7E-55 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 YE1789 498c388601e2043c69bf9802975f86d6 684 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 538 558 5.7E-55 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 YE1789 498c388601e2043c69bf9802975f86d6 684 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 454 472 5.7E-55 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 YE1789 498c388601e2043c69bf9802975f86d6 684 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 596 611 5.7E-55 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 YE1789 498c388601e2043c69bf9802975f86d6 684 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 508 527 5.7E-55 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 YE3524 f5f985a49de21bcd66a72c8e22dfeeac 268 Pfam PF01548 Transposase 5 151 2.0E-19 T 22-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 YE3524 f5f985a49de21bcd66a72c8e22dfeeac 268 Pfam PF02371 Transposase IS116/IS110/IS902 family 227 268 1.1E-6 T 22-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 YE3133 9ca8ab88b9b8fc5448bb6efc8d8229f0 423 SMART SM01086 317 412 5.8E-34 T 22-04-2016 IPR019489 Clp ATPase, C-terminal YE3133 9ca8ab88b9b8fc5448bb6efc8d8229f0 423 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 5 412 1.8E-213 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 YE3133 9ca8ab88b9b8fc5448bb6efc8d8229f0 423 PANTHER PTHR11262 10 413 1.7E-257 T 22-04-2016 YE3133 9ca8ab88b9b8fc5448bb6efc8d8229f0 423 SMART SM00382 111 333 4.3E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain YE3133 9ca8ab88b9b8fc5448bb6efc8d8229f0 423 SUPERFAMILY SSF57716 13 48 5.84E-12 T 22-04-2016 YE3133 9ca8ab88b9b8fc5448bb6efc8d8229f0 423 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 4 415 53.341 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 YE3133 9ca8ab88b9b8fc5448bb6efc8d8229f0 423 SMART SM00994 12 51 1.0E-24 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 YE3133 9ca8ab88b9b8fc5448bb6efc8d8229f0 423 Gene3D G3DSA:3.40.50.300 294 311 1.1E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3133 9ca8ab88b9b8fc5448bb6efc8d8229f0 423 Gene3D G3DSA:3.40.50.300 66 253 1.1E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3133 9ca8ab88b9b8fc5448bb6efc8d8229f0 423 Pfam PF06689 ClpX C4-type zinc finger 13 50 3.0E-21 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 YE3133 9ca8ab88b9b8fc5448bb6efc8d8229f0 423 Gene3D G3DSA:1.10.8.60 316 413 3.0E-37 T 22-04-2016 YE3133 9ca8ab88b9b8fc5448bb6efc8d8229f0 423 Pfam PF07724 AAA domain (Cdc48 subfamily) 112 310 1.9E-48 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 YE3133 9ca8ab88b9b8fc5448bb6efc8d8229f0 423 SUPERFAMILY SSF52540 63 402 1.59E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3133 9ca8ab88b9b8fc5448bb6efc8d8229f0 423 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 317 394 4.8E-17 T 22-04-2016 IPR019489 Clp ATPase, C-terminal YE0497 b24d21ccbf0ff30328607e2e1626e462 167 Pfam PF00583 Acetyltransferase (GNAT) family 66 145 6.4E-13 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YE0497 b24d21ccbf0ff30328607e2e1626e462 167 Gene3D G3DSA:3.40.630.30 10 167 2.0E-33 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE0497 b24d21ccbf0ff30328607e2e1626e462 167 PANTHER PTHR13947 1 167 4.1E-60 T 22-04-2016 YE0497 b24d21ccbf0ff30328607e2e1626e462 167 PANTHER PTHR13947:SF7 1 167 4.1E-60 T 22-04-2016 YE0497 b24d21ccbf0ff30328607e2e1626e462 167 SUPERFAMILY SSF55729 9 167 2.06E-29 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE3617 b6937f3269fb4fba71192ee889616e49 436 Gene3D G3DSA:1.20.1250.20 22 226 1.3E-46 T 22-04-2016 YE3617 b6937f3269fb4fba71192ee889616e49 436 Pfam PF07690 Major Facilitator Superfamily 33 395 1.3E-46 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YE3617 b6937f3269fb4fba71192ee889616e49 436 SUPERFAMILY SSF103473 18 435 1.05E-85 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE3617 b6937f3269fb4fba71192ee889616e49 436 Gene3D G3DSA:1.20.1250.20 244 429 4.2E-20 T 22-04-2016 YE3617 b6937f3269fb4fba71192ee889616e49 436 PANTHER PTHR11662:SF283 1 423 7.6E-182 T 22-04-2016 YE3617 b6937f3269fb4fba71192ee889616e49 436 PANTHER PTHR11662 1 423 7.6E-182 T 22-04-2016 YE1192 f6d37facbfabd6cd0463c6ea9d7cf688 292 Pfam PF01418 Helix-turn-helix domain, rpiR family 13 86 7.6E-23 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 YE1192 f6d37facbfabd6cd0463c6ea9d7cf688 292 Gene3D G3DSA:3.40.50.10490 119 275 1.2E-43 T 22-04-2016 YE1192 f6d37facbfabd6cd0463c6ea9d7cf688 292 SUPERFAMILY SSF46689 12 86 1.97E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE1192 f6d37facbfabd6cd0463c6ea9d7cf688 292 PANTHER PTHR30514:SF1 12 282 5.0E-109 T 22-04-2016 YE1192 f6d37facbfabd6cd0463c6ea9d7cf688 292 PANTHER PTHR30514 12 282 5.0E-109 T 22-04-2016 YE1192 f6d37facbfabd6cd0463c6ea9d7cf688 292 SUPERFAMILY SSF53697 104 289 3.27E-44 T 22-04-2016 YE1192 f6d37facbfabd6cd0463c6ea9d7cf688 292 Gene3D G3DSA:1.10.10.10 12 87 1.9E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1192 f6d37facbfabd6cd0463c6ea9d7cf688 292 Pfam PF01380 SIS domain 138 265 5.9E-21 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 YE1175A 95bc869c5a86eb31a84e059316df5ee1 135 SUPERFAMILY SSF47413 11 62 3.49E-9 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE1175A 95bc869c5a86eb31a84e059316df5ee1 135 SMART SM00530 19 72 1.8E-5 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YE1175A 95bc869c5a86eb31a84e059316df5ee1 135 Gene3D G3DSA:1.10.260.40 12 66 1.1E-9 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE1175A 95bc869c5a86eb31a84e059316df5ee1 135 Pfam PF13560 Helix-turn-helix domain 18 56 2.1E-8 T 22-04-2016 YE3966 ffb697868332bfd90df5f04c7a46f67d 108 SUPERFAMILY SSF50022 1 107 8.45E-35 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 YE3966 ffb697868332bfd90df5f04c7a46f67d 108 Gene3D G3DSA:2.102.10.10 2 107 1.5E-39 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 YE3966 ffb697868332bfd90df5f04c7a46f67d 108 Pfam PF13806 Rieske-like [2Fe-2S] domain 3 107 9.9E-39 T 22-04-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 YE3966 ffb697868332bfd90df5f04c7a46f67d 108 PANTHER PTHR40562 1 106 9.6E-63 T 22-04-2016 YE3966 ffb697868332bfd90df5f04c7a46f67d 108 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 3 107 3.4E-34 T 22-04-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 YE0637 e91a2b49e8846ed939cc0260471cf8be 790 SUPERFAMILY SSF53098 5 395 2.61E-92 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE0637 e91a2b49e8846ed939cc0260471cf8be 790 Gene3D G3DSA:3.30.420.10 151 369 1.2E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE0637 e91a2b49e8846ed939cc0260471cf8be 790 PANTHER PTHR10322 58 790 1.6E-218 T 22-04-2016 YE0637 e91a2b49e8846ed939cc0260471cf8be 790 ProSitePatterns PS00116 DNA polymerase family B signature. 549 557 - T 22-04-2016 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE0637 e91a2b49e8846ed939cc0260471cf8be 790 Pfam PF03104 DNA polymerase family B, exonuclease domain 74 166 6.4E-5 T 22-04-2016 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE0637 e91a2b49e8846ed939cc0260471cf8be 790 Pfam PF03104 DNA polymerase family B, exonuclease domain 210 302 4.9E-5 T 22-04-2016 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE0637 e91a2b49e8846ed939cc0260471cf8be 790 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 495 507 7.2E-10 T 22-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE0637 e91a2b49e8846ed939cc0260471cf8be 790 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 421 434 7.2E-10 T 22-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE0637 e91a2b49e8846ed939cc0260471cf8be 790 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 547 555 7.2E-10 T 22-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE0637 e91a2b49e8846ed939cc0260471cf8be 790 SUPERFAMILY SSF56672 391 784 2.0E-118 T 22-04-2016 YE0637 e91a2b49e8846ed939cc0260471cf8be 790 Pfam PF00136 DNA polymerase family B 386 743 8.8E-42 T 22-04-2016 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE0637 e91a2b49e8846ed939cc0260471cf8be 790 Gene3D G3DSA:3.90.1600.10 398 437 1.8E-11 T 22-04-2016 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE0637 e91a2b49e8846ed939cc0260471cf8be 790 Gene3D G3DSA:3.90.1600.10 518 575 1.8E-11 T 22-04-2016 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE0637 e91a2b49e8846ed939cc0260471cf8be 790 SMART SM00486 151 561 7.3E-63 T 22-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE0630 18c4366f5e18f97075da7444bbee7437 272 PANTHER PTHR11727 1 267 1.2E-98 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm YE0630 18c4366f5e18f97075da7444bbee7437 272 SMART SM00650 25 198 1.9E-81 T 22-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 YE0630 18c4366f5e18f97075da7444bbee7437 272 Pfam PF00398 Ribosomal RNA adenine dimethylase 11 264 6.6E-77 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm YE0630 18c4366f5e18f97075da7444bbee7437 272 SUPERFAMILY SSF53335 17 265 2.55E-77 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE0630 18c4366f5e18f97075da7444bbee7437 272 Gene3D G3DSA:1.10.8.100 203 265 2.8E-23 T 22-04-2016 IPR023165 rRNA adenine dimethylase-like YE0630 18c4366f5e18f97075da7444bbee7437 272 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 11 264 4.9E-87 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 YE0630 18c4366f5e18f97075da7444bbee7437 272 Gene3D G3DSA:3.40.50.150 6 197 1.9E-69 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE0630 18c4366f5e18f97075da7444bbee7437 272 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 265 55.671 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 YE0630 18c4366f5e18f97075da7444bbee7437 272 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 22-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 YE4191 a3bc1c91c32e66bfdb2b6376f6f2dff8 245 Gene3D G3DSA:1.10.3720.10 17 239 8.4E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE4191 a3bc1c91c32e66bfdb2b6376f6f2dff8 245 PANTHER PTHR30085:SF1 14 239 1.0E-62 T 22-04-2016 YE4191 a3bc1c91c32e66bfdb2b6376f6f2dff8 245 PANTHER PTHR30085 14 239 1.0E-62 T 22-04-2016 YE4191 a3bc1c91c32e66bfdb2b6376f6f2dff8 245 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 228 6.6E-13 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE4191 a3bc1c91c32e66bfdb2b6376f6f2dff8 245 SUPERFAMILY SSF161098 17 229 3.16E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE4191 a3bc1c91c32e66bfdb2b6376f6f2dff8 245 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 17 85 2.5E-16 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 YE1784 0dea4bf8ab9d08a32079d3f6d604c077 393 SUPERFAMILY SSF56059 114 314 8.84E-55 T 22-04-2016 YE1784 0dea4bf8ab9d08a32079d3f6d604c077 393 Pfam PF02222 ATP-grasp domain 123 295 2.2E-55 T 22-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 YE1784 0dea4bf8ab9d08a32079d3f6d604c077 393 Gene3D G3DSA:3.40.50.20 5 119 2.2E-40 T 22-04-2016 IPR016185 Pre-ATP-grasp domain YE1784 0dea4bf8ab9d08a32079d3f6d604c077 393 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 14 390 2.6E-186 T 22-04-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 UniPathway: UPA00074 YE1784 0dea4bf8ab9d08a32079d3f6d604c077 393 Gene3D G3DSA:3.30.470.20 199 388 1.0E-65 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 YE1784 0dea4bf8ab9d08a32079d3f6d604c077 393 PANTHER PTHR11609 1 381 7.2E-221 T 22-04-2016 YE1784 0dea4bf8ab9d08a32079d3f6d604c077 393 Hamap MF_01643 Phosphoribosylglycinamide formyltransferase 2 [purT]. 8 391 51.115 T 22-04-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 UniPathway: UPA00074 YE1784 0dea4bf8ab9d08a32079d3f6d604c077 393 PANTHER PTHR11609:SF7 1 381 7.2E-221 T 22-04-2016 YE1784 0dea4bf8ab9d08a32079d3f6d604c077 393 SUPERFAMILY SSF52440 3 112 3.6E-35 T 22-04-2016 IPR016185 Pre-ATP-grasp domain YE1784 0dea4bf8ab9d08a32079d3f6d604c077 393 Gene3D G3DSA:3.30.1490.20 124 198 4.8E-26 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 YE1784 0dea4bf8ab9d08a32079d3f6d604c077 393 SUPERFAMILY SSF51246 319 390 3.3E-18 T 22-04-2016 IPR011054 Rudiment single hybrid motif YE0595 aff0b30d35a2841b3d2eb46d1396fa88 238 SMART SM00862 156 232 2.1E-14 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YE0595 aff0b30d35a2841b3d2eb46d1396fa88 238 Pfam PF00072 Response regulator receiver domain 6 113 2.5E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE0595 aff0b30d35a2841b3d2eb46d1396fa88 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 232 7.0E-18 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YE0595 aff0b30d35a2841b3d2eb46d1396fa88 238 SMART SM00448 4 114 2.6E-38 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE0595 aff0b30d35a2841b3d2eb46d1396fa88 238 SUPERFAMILY SSF46894 137 234 2.72E-21 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YE0595 aff0b30d35a2841b3d2eb46d1396fa88 238 PANTHER PTHR26402:SF586 4 238 5.9E-155 T 22-04-2016 YE0595 aff0b30d35a2841b3d2eb46d1396fa88 238 SUPERFAMILY SSF52172 2 125 1.32E-35 T 22-04-2016 IPR011006 CheY-like superfamily YE0595 aff0b30d35a2841b3d2eb46d1396fa88 238 PANTHER PTHR26402 4 238 5.9E-155 T 22-04-2016 YE0595 aff0b30d35a2841b3d2eb46d1396fa88 238 Gene3D G3DSA:3.40.50.2300 2 122 1.2E-35 T 22-04-2016 YE0595 aff0b30d35a2841b3d2eb46d1396fa88 238 Gene3D G3DSA:1.10.10.10 136 233 2.0E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2429 1038cfa98d85e89d4479ebfaa3cf7d03 133 Pfam PF04247 Invasion gene expression up-regulator, SirB 5 126 7.5E-45 T 22-04-2016 IPR007360 Invasion gene expression up-regulator, SirB YE2429 1038cfa98d85e89d4479ebfaa3cf7d03 133 PANTHER PTHR39594 1 131 8.1E-53 T 22-04-2016 YE2429 1038cfa98d85e89d4479ebfaa3cf7d03 133 PIRSF PIRSF005610 1 125 5.2E-28 T 22-04-2016 IPR007360 Invasion gene expression up-regulator, SirB YE2949 741b6991ae0abdc10f4c7ef0886aee06 426 PIRSF PIRSF001369 37 426 2.2E-174 T 22-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 YE2949 741b6991ae0abdc10f4c7ef0886aee06 426 Pfam PF00285 Citrate synthase, C-terminal domain 45 409 2.5E-133 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 YE2949 741b6991ae0abdc10f4c7ef0886aee06 426 SUPERFAMILY SSF48256 3 421 8.9E-168 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 YE2949 741b6991ae0abdc10f4c7ef0886aee06 426 Gene3D G3DSA:1.10.230.10 280 372 8.1E-43 T 22-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain YE2949 741b6991ae0abdc10f4c7ef0886aee06 426 PANTHER PTHR11739 38 420 1.2E-206 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 YE2949 741b6991ae0abdc10f4c7ef0886aee06 426 ProSitePatterns PS00480 Citrate synthase signature. 302 314 - T 22-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 YE2949 741b6991ae0abdc10f4c7ef0886aee06 426 PRINTS PR00143 Citrate synthase signature 378 392 7.1E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 YE2949 741b6991ae0abdc10f4c7ef0886aee06 426 PRINTS PR00143 Citrate synthase signature 295 315 7.1E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 YE2949 741b6991ae0abdc10f4c7ef0886aee06 426 PRINTS PR00143 Citrate synthase signature 218 233 7.1E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 YE2949 741b6991ae0abdc10f4c7ef0886aee06 426 PRINTS PR00143 Citrate synthase signature 358 374 7.1E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 YE2949 741b6991ae0abdc10f4c7ef0886aee06 426 PRINTS PR00143 Citrate synthase signature 164 177 7.1E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 YE2949 741b6991ae0abdc10f4c7ef0886aee06 426 PRINTS PR00143 Citrate synthase signature 240 268 7.1E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 YE2949 741b6991ae0abdc10f4c7ef0886aee06 426 Gene3D G3DSA:1.10.580.10 51 279 9.2E-98 T 22-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 YE2949 741b6991ae0abdc10f4c7ef0886aee06 426 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 13 420 1.5E-236 T 22-04-2016 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 UniPathway: UPA00223 YE0843 a589ca72213566fd140ba11f16025406 82 Gene3D G3DSA:3.30.1320.10 1 79 1.4E-32 T 22-04-2016 IPR023803 Ribosomal protein S16 domain YE0843 a589ca72213566fd140ba11f16025406 82 Pfam PF00886 Ribosomal protein S16 8 68 1.1E-23 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0843 a589ca72213566fd140ba11f16025406 82 PANTHER PTHR12919 1 78 1.4E-40 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0843 a589ca72213566fd140ba11f16025406 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 23.948 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0843 a589ca72213566fd140ba11f16025406 82 SUPERFAMILY SSF54565 1 76 1.83E-28 T 22-04-2016 IPR023803 Ribosomal protein S16 domain YE0843 a589ca72213566fd140ba11f16025406 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 22-04-2016 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0843 a589ca72213566fd140ba11f16025406 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 4.0E-29 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0412 fffaa27d88fa20cee0733284da03cb0b 87 SUPERFAMILY SSF159871 3 87 1.44E-28 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 YE0412 fffaa27d88fa20cee0733284da03cb0b 87 PANTHER PTHR34156:SF5 2 87 1.5E-53 T 22-04-2016 YE0412 fffaa27d88fa20cee0733284da03cb0b 87 Gene3D G3DSA:3.30.1660.10 18 87 1.5E-30 T 22-04-2016 IPR025543 Dodecin-like YE0412 fffaa27d88fa20cee0733284da03cb0b 87 Pfam PF07338 Protein of unknown function (DUF1471) 34 87 7.7E-25 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 YE0412 fffaa27d88fa20cee0733284da03cb0b 87 PANTHER PTHR34156 2 87 1.5E-53 T 22-04-2016 YE1223 cad639094d7e6e795241436c1ea5df0f 295 SUPERFAMILY SSF53850 90 290 3.26E-33 T 22-04-2016 YE1223 cad639094d7e6e795241436c1ea5df0f 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 4.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE1223 cad639094d7e6e795241436c1ea5df0f 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 4.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE1223 cad639094d7e6e795241436c1ea5df0f 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 4.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE1223 cad639094d7e6e795241436c1ea5df0f 295 Pfam PF03466 LysR substrate binding domain 89 284 1.5E-28 T 22-04-2016 IPR005119 LysR, substrate-binding YE1223 cad639094d7e6e795241436c1ea5df0f 295 Gene3D G3DSA:3.40.190.10 92 181 6.7E-11 T 22-04-2016 YE1223 cad639094d7e6e795241436c1ea5df0f 295 Gene3D G3DSA:3.40.190.10 182 255 2.5E-8 T 22-04-2016 YE1223 cad639094d7e6e795241436c1ea5df0f 295 PANTHER PTHR30126:SF29 2 284 5.4E-121 T 22-04-2016 YE1223 cad639094d7e6e795241436c1ea5df0f 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 4.5E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE1223 cad639094d7e6e795241436c1ea5df0f 295 Gene3D G3DSA:1.10.10.10 4 81 7.0E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1223 cad639094d7e6e795241436c1ea5df0f 295 PANTHER PTHR30126 2 284 5.4E-121 T 22-04-2016 YE1223 cad639094d7e6e795241436c1ea5df0f 295 SUPERFAMILY SSF46785 6 83 2.84E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3421 e137cbc37fbed361032820f8314be409 384 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 380 9.6E-200 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 YE3421 e137cbc37fbed361032820f8314be409 384 SUPERFAMILY SSF55973 112 232 2.63E-52 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 YE3421 e137cbc37fbed361032820f8314be409 384 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 1.1E-45 T 22-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 YE3421 e137cbc37fbed361032820f8314be409 384 SUPERFAMILY SSF55973 233 382 7.46E-72 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 YE3421 e137cbc37fbed361032820f8314be409 384 SUPERFAMILY SSF55973 3 109 2.08E-47 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 YE3421 e137cbc37fbed361032820f8314be409 384 Gene3D G3DSA:3.30.300.10 136 233 2.7E-44 T 22-04-2016 YE3421 e137cbc37fbed361032820f8314be409 384 Gene3D G3DSA:3.30.300.10 244 381 1.2E-71 T 22-04-2016 YE3421 e137cbc37fbed361032820f8314be409 384 PANTHER PTHR11964 1 376 1.6E-290 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 YE3421 e137cbc37fbed361032820f8314be409 384 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 3.6E-43 T 22-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 YE3421 e137cbc37fbed361032820f8314be409 384 PIRSF PIRSF000497 1 381 1.0E-174 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 YE3421 e137cbc37fbed361032820f8314be409 384 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 370 4.7E-70 T 22-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 YE3421 e137cbc37fbed361032820f8314be409 384 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 59.727 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 YE3421 e137cbc37fbed361032820f8314be409 384 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 YE3421 e137cbc37fbed361032820f8314be409 384 Gene3D G3DSA:3.30.300.10 11 135 1.7E-50 T 22-04-2016 YE3421 e137cbc37fbed361032820f8314be409 384 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 YE1140 a3cadd5d7b074735e9dc8edc7f41646f 237 PANTHER PTHR11609 3 236 2.3E-120 T 22-04-2016 YE1140 a3cadd5d7b074735e9dc8edc7f41646f 237 Pfam PF01259 SAICAR synthetase 6 231 3.0E-57 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 YE1140 a3cadd5d7b074735e9dc8edc7f41646f 237 Gene3D G3DSA:3.30.200.20 7 93 2.1E-32 T 22-04-2016 YE1140 a3cadd5d7b074735e9dc8edc7f41646f 237 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 234 28.801 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 YE1140 a3cadd5d7b074735e9dc8edc7f41646f 237 Gene3D G3DSA:3.30.470.20 94 219 1.9E-48 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 YE1140 a3cadd5d7b074735e9dc8edc7f41646f 237 SUPERFAMILY SSF56104 2 232 1.93E-75 T 22-04-2016 YE1140 a3cadd5d7b074735e9dc8edc7f41646f 237 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 22-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 YE1140 a3cadd5d7b074735e9dc8edc7f41646f 237 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 22-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 YE1140 a3cadd5d7b074735e9dc8edc7f41646f 237 PANTHER PTHR11609:SF2 3 236 2.3E-120 T 22-04-2016 YE1140 a3cadd5d7b074735e9dc8edc7f41646f 237 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 3 234 2.2E-79 T 22-04-2016 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 YE1799 939fdf882f0db56382b96ab538af68ea 351 SUPERFAMILY SSF54171 11 60 1.7E-12 T 22-04-2016 IPR016177 DNA-binding domain GO:0003677 YE1799 939fdf882f0db56382b96ab538af68ea 351 Pfam PF09003 Bacteriophage lambda integrase, N-terminal domain 1 70 7.6E-19 T 22-04-2016 IPR015094 Integrase, lambda-type, N-terminal DNA-binding GO:0003677|GO:0008907|GO:0015074 YE1799 939fdf882f0db56382b96ab538af68ea 351 Gene3D G3DSA:3.30.160.60 1 65 4.8E-20 T 22-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 YE1799 939fdf882f0db56382b96ab538af68ea 351 Gene3D G3DSA:1.10.443.10 188 315 3.3E-20 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 YE1799 939fdf882f0db56382b96ab538af68ea 351 Gene3D G3DSA:1.10.150.130 84 185 4.0E-33 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal YE1799 939fdf882f0db56382b96ab538af68ea 351 SUPERFAMILY SSF56349 84 314 1.8E-42 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YE1799 939fdf882f0db56382b96ab538af68ea 351 Pfam PF00589 Phage integrase family 197 318 5.1E-7 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 YE2777 ddfe8bde2ad7aea86b63e01b519d6ab4 297 PANTHER PTHR22572 5 296 3.9E-204 T 22-04-2016 YE2777 ddfe8bde2ad7aea86b63e01b519d6ab4 297 Pfam PF00483 Nucleotidyl transferase 5 253 2.8E-22 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 YE2777 ddfe8bde2ad7aea86b63e01b519d6ab4 297 Gene3D G3DSA:3.90.550.10 3 284 2.0E-65 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YE2777 ddfe8bde2ad7aea86b63e01b519d6ab4 297 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 5 273 1.1E-103 T 22-04-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 YE2777 ddfe8bde2ad7aea86b63e01b519d6ab4 297 PANTHER PTHR22572:SF118 5 296 3.9E-204 T 22-04-2016 YE2777 ddfe8bde2ad7aea86b63e01b519d6ab4 297 SUPERFAMILY SSF53448 1 290 8.11E-58 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YE3256 176f3463c195745edbc12e1a4fd1292a 135 Hamap MF_00976 Outer membrane lipoprotein RcsF [rcsF]. 1 134 37.092 T 22-04-2016 IPR030852 Outer membrane lipoprotein RcsF GO:0009279|GO:0035556 YE3256 176f3463c195745edbc12e1a4fd1292a 135 Pfam PF16358 RcsF lipoprotein 34 133 1.1E-52 T 22-04-2016 IPR030852 Outer membrane lipoprotein RcsF GO:0009279|GO:0035556 YE2090 4e48edb1b8d36d9bef625f613d3e7129 1280 PANTHER PTHR18934 719 847 0.0 T 22-04-2016 YE2090 4e48edb1b8d36d9bef625f613d3e7129 1280 PANTHER PTHR18934 5 682 0.0 T 22-04-2016 YE2090 4e48edb1b8d36d9bef625f613d3e7129 1280 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 562 678 3.2E-16 T 22-04-2016 IPR011709 Domain of unknown function DUF1605 YE2090 4e48edb1b8d36d9bef625f613d3e7129 1280 Pfam PF11898 Domain of unknown function (DUF3418) 693 1276 3.1E-238 T 22-04-2016 IPR024590 RNA helicase HrpA, C-terminal YE2090 4e48edb1b8d36d9bef625f613d3e7129 1280 PANTHER PTHR18934:SF109 719 847 0.0 T 22-04-2016 YE2090 4e48edb1b8d36d9bef625f613d3e7129 1280 PANTHER PTHR18934:SF109 5 682 0.0 T 22-04-2016 YE2090 4e48edb1b8d36d9bef625f613d3e7129 1280 SMART SM00382 73 365 3.0E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain YE2090 4e48edb1b8d36d9bef625f613d3e7129 1280 Pfam PF00271 Helicase conserved C-terminal domain 267 384 7.0E-11 T 22-04-2016 IPR001650 Helicase, C-terminal YE2090 4e48edb1b8d36d9bef625f613d3e7129 1280 Gene3D G3DSA:3.40.50.300 471 598 1.5E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2090 4e48edb1b8d36d9bef625f613d3e7129 1280 SMART SM00847 445 539 5.5E-35 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 YE2090 4e48edb1b8d36d9bef625f613d3e7129 1280 Gene3D G3DSA:3.40.50.300 253 397 7.3E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2090 4e48edb1b8d36d9bef625f613d3e7129 1280 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 1 1277 0.0 T 22-04-2016 IPR010222 RNA helicase HrpA GO:0004004 YE2090 4e48edb1b8d36d9bef625f613d3e7129 1280 Pfam PF04408 Helicase associated domain (HA2) 447 537 4.0E-16 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 YE2090 4e48edb1b8d36d9bef625f613d3e7129 1280 SUPERFAMILY SSF52540 55 581 2.85E-109 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2090 4e48edb1b8d36d9bef625f613d3e7129 1280 SMART SM00487 56 240 1.7E-26 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain YE2090 4e48edb1b8d36d9bef625f613d3e7129 1280 SMART SM00490 286 385 2.0E-15 T 22-04-2016 IPR001650 Helicase, C-terminal YE2090 4e48edb1b8d36d9bef625f613d3e7129 1280 Pfam PF00270 DEAD/DEAH box helicase 67 214 2.8E-6 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YE2090 4e48edb1b8d36d9bef625f613d3e7129 1280 Gene3D G3DSA:3.40.50.300 58 214 7.9E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1870 c17253ee1dae4fa81c95b397bdd6567f 339 Pfam PF01548 Transposase 6 146 1.8E-15 T 22-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 YE1870 c17253ee1dae4fa81c95b397bdd6567f 339 Pfam PF02371 Transposase IS116/IS110/IS902 family 211 287 1.1E-25 T 22-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 YE1870 c17253ee1dae4fa81c95b397bdd6567f 339 PANTHER PTHR33055:SF2 2 334 3.9E-137 T 22-04-2016 YE1870 c17253ee1dae4fa81c95b397bdd6567f 339 PANTHER PTHR33055 2 334 3.9E-137 T 22-04-2016 YE2212 3bb573f85dc75872bb19f28534ceb76f 444 SUPERFAMILY SSF51366 249 442 4.55E-58 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 YE2212 3bb573f85dc75872bb19f28534ceb76f 444 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 249 439 1.0E-58 T 22-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 YE2212 3bb573f85dc75872bb19f28534ceb76f 444 Pfam PF00218 Indole-3-glycerol phosphate synthase 2 243 2.5E-95 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 YE2212 3bb573f85dc75872bb19f28534ceb76f 444 Gene3D G3DSA:3.20.20.70 1 250 1.6E-99 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YE2212 3bb573f85dc75872bb19f28534ceb76f 444 PANTHER PTHR22854:SF2 1 274 2.2E-138 T 22-04-2016 YE2212 3bb573f85dc75872bb19f28534ceb76f 444 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 247 444 30.219 T 22-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 YE2212 3bb573f85dc75872bb19f28534ceb76f 444 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 42 60 - T 22-04-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 YE2212 3bb573f85dc75872bb19f28534ceb76f 444 PANTHER PTHR22854 1 274 2.2E-138 T 22-04-2016 YE2212 3bb573f85dc75872bb19f28534ceb76f 444 Gene3D G3DSA:3.20.20.70 251 437 2.4E-64 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YE2212 3bb573f85dc75872bb19f28534ceb76f 444 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 1 246 32.651 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 YE2212 3bb573f85dc75872bb19f28534ceb76f 444 SUPERFAMILY SSF51366 2 243 5.18E-82 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 YE0074 a269ff587f5760d5fa18a32c0372d172 341 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 134 4.4E-32 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 YE0074 a269ff587f5760d5fa18a32c0372d172 341 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 1 340 60.4 T 22-04-2016 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378|UniPathway: UPA00046 YE0074 a269ff587f5760d5fa18a32c0372d172 341 SMART SM00829 12 338 2.2E-6 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 YE0074 a269ff587f5760d5fa18a32c0372d172 341 PANTHER PTHR11695 13 341 2.2E-161 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 YE0074 a269ff587f5760d5fa18a32c0372d172 341 Gene3D G3DSA:3.90.180.10 1 172 4.4E-52 T 22-04-2016 IPR011032 GroES-like YE0074 a269ff587f5760d5fa18a32c0372d172 341 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 YE0074 a269ff587f5760d5fa18a32c0372d172 341 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 3 340 7.4E-183 T 22-04-2016 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378|UniPathway: UPA00046 YE0074 a269ff587f5760d5fa18a32c0372d172 341 SUPERFAMILY SSF50129 1 173 5.17E-54 T 22-04-2016 IPR011032 GroES-like YE0074 a269ff587f5760d5fa18a32c0372d172 341 Gene3D G3DSA:3.40.50.720 173 287 5.9E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain YE0074 a269ff587f5760d5fa18a32c0372d172 341 SUPERFAMILY SSF51735 141 305 6.05E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain YE0074 a269ff587f5760d5fa18a32c0372d172 341 PANTHER PTHR11695:SF285 13 341 2.2E-161 T 22-04-2016 YE0074 a269ff587f5760d5fa18a32c0372d172 341 Pfam PF00107 Zinc-binding dehydrogenase 174 301 4.8E-28 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 YE3545 82f67a77385da6611cd1b9d20680f64a 135 PRINTS PR01305 Invasion protein B family signature 30 40 2.7E-22 T 22-04-2016 IPR003065 Surface presentation of antigens protein SpaK YE3545 82f67a77385da6611cd1b9d20680f64a 135 PRINTS PR01305 Invasion protein B family signature 98 111 2.7E-22 T 22-04-2016 IPR003065 Surface presentation of antigens protein SpaK YE3545 82f67a77385da6611cd1b9d20680f64a 135 PRINTS PR01305 Invasion protein B family signature 17 30 2.7E-22 T 22-04-2016 IPR003065 Surface presentation of antigens protein SpaK YE3545 82f67a77385da6611cd1b9d20680f64a 135 PRINTS PR01305 Invasion protein B family signature 40 54 2.7E-22 T 22-04-2016 IPR003065 Surface presentation of antigens protein SpaK YE3545 82f67a77385da6611cd1b9d20680f64a 135 PRINTS PR01305 Invasion protein B family signature 111 123 2.7E-22 T 22-04-2016 IPR003065 Surface presentation of antigens protein SpaK YE3545 82f67a77385da6611cd1b9d20680f64a 135 Gene3D G3DSA:3.30.1460.10 1 132 2.4E-42 T 22-04-2016 YE3545 82f67a77385da6611cd1b9d20680f64a 135 SUPERFAMILY SSF69635 1 133 9.81E-45 T 22-04-2016 YE3545 82f67a77385da6611cd1b9d20680f64a 135 Pfam PF03519 Invasion protein B family 17 92 2.0E-22 T 22-04-2016 IPR003065 Surface presentation of antigens protein SpaK YE1247 55f0dd5289a5f46031939dc036405710 381 PANTHER PTHR30188 38 381 2.1E-156 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 YE1247 55f0dd5289a5f46031939dc036405710 381 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 137 377 5.4E-72 T 22-04-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria YE1247 55f0dd5289a5f46031939dc036405710 381 Pfam PF02405 Permease MlaE 165 374 3.9E-67 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 YE1247 55f0dd5289a5f46031939dc036405710 381 PANTHER PTHR30188:SF3 38 381 2.1E-156 T 22-04-2016 YE0575 7eac7957c9a91685ff0243144f384949 447 Pfam PF07804 HipA-like C-terminal domain 327 407 1.4E-9 T 22-04-2016 IPR012893 HipA-like, C-terminal YE0575 7eac7957c9a91685ff0243144f384949 447 PANTHER PTHR37419:SF2 44 446 6.1E-87 T 22-04-2016 YE0575 7eac7957c9a91685ff0243144f384949 447 Pfam PF01022 Bacterial regulatory protein, arsR family 6 38 4.4E-6 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YE0575 7eac7957c9a91685ff0243144f384949 447 Pfam PF07805 HipA-like N-terminal domain 203 284 4.1E-9 T 22-04-2016 IPR012894 HipA, N-terminal subdomain 2 YE0575 7eac7957c9a91685ff0243144f384949 447 SUPERFAMILY SSF46785 6 38 1.13E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0575 7eac7957c9a91685ff0243144f384949 447 Gene3D G3DSA:1.10.10.10 4 39 1.1E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0575 7eac7957c9a91685ff0243144f384949 447 PANTHER PTHR37419 44 446 6.1E-87 T 22-04-2016 YE0454 1592106e1083715c29338465091259e6 438 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 1 429 2.6E-142 T 22-04-2016 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 YE0454 1592106e1083715c29338465091259e6 438 PANTHER PTHR11785:SF341 2 438 2.9E-209 T 22-04-2016 YE0454 1592106e1083715c29338465091259e6 438 Pfam PF13520 Amino acid permease 9 415 6.1E-48 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YE0454 1592106e1083715c29338465091259e6 438 PANTHER PTHR11785 2 438 2.9E-209 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YE0454 1592106e1083715c29338465091259e6 438 TIGRFAM TIGR04299 antiport_PotE: putrescine-ornithine antiporter 5 432 2.0E-241 T 22-04-2016 IPR027566 Putrescine-ornithine antiporter GO:0015496|GO:0015822|GO:0015847 YE0454 1592106e1083715c29338465091259e6 438 PIRSF PIRSF006060 1 436 1.3E-48 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YE3400 327b03c2a3214ccad8969d7aa2ca2796 413 PANTHER PTHR10996:SF18 1 370 6.9E-245 T 22-04-2016 IPR029015 D-3-phosphoglycerate dehydrogenase, type2 GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|UniPathway: UPA00135 YE3400 327b03c2a3214ccad8969d7aa2ca2796 413 Gene3D G3DSA:3.40.50.720 8 119 2.7E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3400 327b03c2a3214ccad8969d7aa2ca2796 413 Gene3D G3DSA:3.30.70.260 324 412 3.4E-28 T 22-04-2016 YE3400 327b03c2a3214ccad8969d7aa2ca2796 413 SUPERFAMILY SSF52283 7 135 1.49E-48 T 22-04-2016 YE3400 327b03c2a3214ccad8969d7aa2ca2796 413 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 14 326 1.0E-37 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 YE3400 327b03c2a3214ccad8969d7aa2ca2796 413 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 119 294 1.4E-51 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 YE3400 327b03c2a3214ccad8969d7aa2ca2796 413 PANTHER PTHR10996 1 370 6.9E-245 T 22-04-2016 YE3400 327b03c2a3214ccad8969d7aa2ca2796 413 Pfam PF01842 ACT domain 347 404 1.4E-6 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 YE3400 327b03c2a3214ccad8969d7aa2ca2796 413 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YE3400 327b03c2a3214ccad8969d7aa2ca2796 413 Gene3D G3DSA:3.40.50.720 120 297 1.9E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3400 327b03c2a3214ccad8969d7aa2ca2796 413 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YE3400 327b03c2a3214ccad8969d7aa2ca2796 413 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YE3400 327b03c2a3214ccad8969d7aa2ca2796 413 SUPERFAMILY SSF51735 108 295 1.89E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3400 327b03c2a3214ccad8969d7aa2ca2796 413 SUPERFAMILY SSF55021 338 412 1.19E-18 T 22-04-2016 YE2462 47bc0c2f56184b03f6a788deeace9e5e 269 SUPERFAMILY SSF53187 4 265 3.98E-76 T 22-04-2016 YE2462 47bc0c2f56184b03f6a788deeace9e5e 269 Gene3D G3DSA:3.40.630.40 5 265 3.7E-85 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 YE2462 47bc0c2f56184b03f6a788deeace9e5e 269 TIGRFAM TIGR02017 hutG_amidohyd: N-formylglutamate deformylase 7 265 2.0E-116 T 22-04-2016 IPR010247 N-formylglutamate deformylase YE2462 47bc0c2f56184b03f6a788deeace9e5e 269 Pfam PF05013 N-formylglutamate amidohydrolase 15 232 3.9E-63 T 22-04-2016 IPR007709 N-formylglutamate amidohydrolase YE0059 736c0120adde2a011712e7e0fee19506 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 35.795 T 22-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 YE0059 736c0120adde2a011712e7e0fee19506 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 5.5E-67 T 22-04-2016 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 YE0059 736c0120adde2a011712e7e0fee19506 213 PANTHER PTHR19278 1 213 3.0E-149 T 22-04-2016 YE0059 736c0120adde2a011712e7e0fee19506 213 PANTHER PTHR19278:SF36 1 213 3.0E-149 T 22-04-2016 YE0059 736c0120adde2a011712e7e0fee19506 213 SUPERFAMILY SSF53271 2 212 8.66E-50 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YE0059 736c0120adde2a011712e7e0fee19506 213 Gene3D G3DSA:3.40.50.2020 7 212 3.5E-82 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YE0059 736c0120adde2a011712e7e0fee19506 213 Pfam PF00156 Phosphoribosyl transferase domain 43 159 4.1E-12 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 YE2430 36db0829b1825937789b2af753ff78dc 284 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 179 185 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 YE2430 36db0829b1825937789b2af753ff78dc 284 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 1 274 3.0E-88 T 22-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 YE2430 36db0829b1825937789b2af753ff78dc 284 Gene3D G3DSA:3.40.50.150 87 274 6.5E-69 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE2430 36db0829b1825937789b2af753ff78dc 284 Gene3D G3DSA:1.10.8.10 1 84 2.0E-29 T 22-04-2016 YE2430 36db0829b1825937789b2af753ff78dc 284 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 4 274 44.224 T 22-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 YE2430 36db0829b1825937789b2af753ff78dc 284 SUPERFAMILY SSF53335 3 272 9.31E-58 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE2430 36db0829b1825937789b2af753ff78dc 284 PANTHER PTHR18895:SF64 1 274 1.7E-113 T 22-04-2016 YE2430 36db0829b1825937789b2af753ff78dc 284 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 23 270 4.0E-90 T 22-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 YE2430 36db0829b1825937789b2af753ff78dc 284 Pfam PF13847 Methyltransferase domain 111 252 9.7E-23 T 22-04-2016 IPR025714 Methyltransferase domain YE2430 36db0829b1825937789b2af753ff78dc 284 PANTHER PTHR18895 1 274 1.7E-113 T 22-04-2016 YE2396 08292613aa273b0379fc399f29397dab 140 SUPERFAMILY SSF55811 5 133 2.3E-22 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YE2396 08292613aa273b0379fc399f29397dab 140 Pfam PF00293 NUDIX domain 4 122 2.6E-16 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 YE2396 08292613aa273b0379fc399f29397dab 140 PRINTS PR01404 DATP pyrophosphohydrolase signature 9 30 6.4E-38 T 22-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 YE2396 08292613aa273b0379fc399f29397dab 140 PRINTS PR01404 DATP pyrophosphohydrolase signature 88 109 6.4E-38 T 22-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 YE2396 08292613aa273b0379fc399f29397dab 140 PRINTS PR01404 DATP pyrophosphohydrolase signature 115 128 6.4E-38 T 22-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 YE2396 08292613aa273b0379fc399f29397dab 140 PRINTS PR01404 DATP pyrophosphohydrolase signature 60 79 6.4E-38 T 22-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 YE2396 08292613aa273b0379fc399f29397dab 140 Gene3D G3DSA:3.90.79.10 4 132 2.5E-25 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YE2396 08292613aa273b0379fc399f29397dab 140 ProSitePatterns PS00893 Nudix box signature. 27 48 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 YE2396 08292613aa273b0379fc399f29397dab 140 PANTHER PTHR22769:SF28 1 136 6.0E-61 T 22-04-2016 YE2396 08292613aa273b0379fc399f29397dab 140 PANTHER PTHR22769 1 136 6.0E-61 T 22-04-2016 YE2988 81d44765ab7e9f764ee8d0a47de76be9 292 Pfam PF03471 Transporter associated domain 206 281 3.3E-22 T 22-04-2016 IPR005170 Transporter-associated domain YE2988 81d44765ab7e9f764ee8d0a47de76be9 292 PANTHER PTHR22777:SF17 18 292 2.1E-129 T 22-04-2016 YE2988 81d44765ab7e9f764ee8d0a47de76be9 292 SMART SM01091 205 283 1.1E-30 T 22-04-2016 IPR005170 Transporter-associated domain YE2988 81d44765ab7e9f764ee8d0a47de76be9 292 Pfam PF00571 CBS domain 143 189 9.2E-5 T 22-04-2016 IPR000644 CBS domain YE2988 81d44765ab7e9f764ee8d0a47de76be9 292 Pfam PF00571 CBS domain 69 123 4.9E-8 T 22-04-2016 IPR000644 CBS domain YE2988 81d44765ab7e9f764ee8d0a47de76be9 292 SUPERFAMILY SSF54631 66 202 3.16E-32 T 22-04-2016 YE2988 81d44765ab7e9f764ee8d0a47de76be9 292 SMART SM00116 78 127 3.9 T 22-04-2016 IPR000644 CBS domain YE2988 81d44765ab7e9f764ee8d0a47de76be9 292 SMART SM00116 141 189 3.7 T 22-04-2016 IPR000644 CBS domain YE2988 81d44765ab7e9f764ee8d0a47de76be9 292 Gene3D G3DSA:3.10.580.10 55 197 1.6E-22 T 22-04-2016 YE2988 81d44765ab7e9f764ee8d0a47de76be9 292 Gene3D G3DSA:3.30.465.10 198 283 8.3E-32 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 YE2988 81d44765ab7e9f764ee8d0a47de76be9 292 PANTHER PTHR22777 18 292 2.1E-129 T 22-04-2016 YE2988 81d44765ab7e9f764ee8d0a47de76be9 292 SUPERFAMILY SSF56176 203 289 3.54E-24 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 YE2614 91c6f26fd774fa07d40d021ac7925fa5 600 Pfam PF00664 ABC transporter transmembrane region 34 292 1.5E-7 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YE2614 91c6f26fd774fa07d40d021ac7925fa5 600 SUPERFAMILY SSF52540 338 581 1.41E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2614 91c6f26fd774fa07d40d021ac7925fa5 600 Pfam PF00005 ABC transporter 361 510 1.9E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE2614 91c6f26fd774fa07d40d021ac7925fa5 600 PANTHER PTHR24222:SF25 1 597 0.0 T 22-04-2016 YE2614 91c6f26fd774fa07d40d021ac7925fa5 600 Gene3D G3DSA:3.40.50.300 344 575 1.5E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2614 91c6f26fd774fa07d40d021ac7925fa5 600 SMART SM00382 370 562 6.0E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain YE2614 91c6f26fd774fa07d40d021ac7925fa5 600 PANTHER PTHR24222 1 597 0.0 T 22-04-2016 YE2614 91c6f26fd774fa07d40d021ac7925fa5 600 Gene3D G3DSA:1.20.1560.10 17 331 6.7E-34 T 22-04-2016 YE2614 91c6f26fd774fa07d40d021ac7925fa5 600 ProSitePatterns PS00211 ABC transporters family signature. 482 496 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE2614 91c6f26fd774fa07d40d021ac7925fa5 600 SUPERFAMILY SSF90123 17 329 1.26E-36 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YE3791 f1a2221b21972c21225f74a871053711 88 SUPERFAMILY SSF52038 1 87 7.98E-29 T 22-04-2016 IPR000468 Barstar (barnase inhibitor) YE3791 f1a2221b21972c21225f74a871053711 88 Gene3D G3DSA:3.30.370.10 1 84 1.5E-23 T 22-04-2016 IPR000468 Barstar (barnase inhibitor) YE3791 f1a2221b21972c21225f74a871053711 88 Pfam PF01337 Barstar (barnase inhibitor) 6 80 1.5E-11 T 22-04-2016 IPR000468 Barstar (barnase inhibitor) YE2276 e81c7e8f4367cf647adfa7d17078e17d 301 Gene3D G3DSA:3.40.190.10 180 263 1.0E-19 T 22-04-2016 YE2276 e81c7e8f4367cf647adfa7d17078e17d 301 SUPERFAMILY SSF46785 3 83 1.06E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2276 e81c7e8f4367cf647adfa7d17078e17d 301 Pfam PF03466 LysR substrate binding domain 88 292 2.7E-32 T 22-04-2016 IPR005119 LysR, substrate-binding YE2276 e81c7e8f4367cf647adfa7d17078e17d 301 Gene3D G3DSA:1.10.10.10 2 83 7.3E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2276 e81c7e8f4367cf647adfa7d17078e17d 301 SUPERFAMILY SSF53850 88 294 3.08E-33 T 22-04-2016 YE2276 e81c7e8f4367cf647adfa7d17078e17d 301 PANTHER PTHR30537:SF29 1 298 7.5E-197 T 22-04-2016 YE2276 e81c7e8f4367cf647adfa7d17078e17d 301 Gene3D G3DSA:3.40.190.10 92 179 1.2E-15 T 22-04-2016 YE2276 e81c7e8f4367cf647adfa7d17078e17d 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 6.0E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE2276 e81c7e8f4367cf647adfa7d17078e17d 301 PANTHER PTHR30537 1 298 7.5E-197 T 22-04-2016 YE1873 6b59ac5b99b230b591f190e4b997e734 212 SUPERFAMILY SSF54523 120 212 1.73E-22 T 22-04-2016 YE1873 6b59ac5b99b230b591f190e4b997e734 212 Pfam PF03895 YadA-like C-terminal region 136 212 3.5E-20 T 22-04-2016 IPR005594 YadA-like, C-terminal YE1873 6b59ac5b99b230b591f190e4b997e734 212 Gene3D G3DSA:3.30.1300.30 120 212 5.9E-21 T 22-04-2016 YE1847 f8d851b0b56b8dcf0a0e80f459f433b1 346 SUPERFAMILY SSF82689 231 335 7.19E-17 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 YE1847 f8d851b0b56b8dcf0a0e80f459f433b1 346 Pfam PF00924 Mechanosensitive ion channel 121 323 1.4E-57 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 YE1847 f8d851b0b56b8dcf0a0e80f459f433b1 346 PANTHER PTHR30566 37 346 4.0E-82 T 22-04-2016 YE1847 f8d851b0b56b8dcf0a0e80f459f433b1 346 Gene3D G3DSA:2.30.30.60 178 228 6.8E-15 T 22-04-2016 YE1847 f8d851b0b56b8dcf0a0e80f459f433b1 346 SUPERFAMILY SSF82861 79 160 5.36E-10 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 YE1847 f8d851b0b56b8dcf0a0e80f459f433b1 346 PANTHER PTHR30566:SF5 37 346 4.0E-82 T 22-04-2016 YE1847 f8d851b0b56b8dcf0a0e80f459f433b1 346 SUPERFAMILY SSF50182 162 228 1.34E-17 T 22-04-2016 IPR010920 LSM domain YE1847 f8d851b0b56b8dcf0a0e80f459f433b1 346 Gene3D G3DSA:3.30.70.100 233 321 6.0E-11 T 22-04-2016 YE0482 93272c2322baf311b4b77fb678c465be 712 Pfam PF03477 ATP cone domain 4 89 9.4E-19 T 22-04-2016 IPR005144 ATP-cone domain YE0482 93272c2322baf311b4b77fb678c465be 712 PANTHER PTHR21075 1 711 0.0 T 22-04-2016 YE0482 93272c2322baf311b4b77fb678c465be 712 Gene3D G3DSA:3.20.70.20 124 685 6.5E-184 T 22-04-2016 YE0482 93272c2322baf311b4b77fb678c465be 712 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 116 705 2.3E-181 T 22-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 YE0482 93272c2322baf311b4b77fb678c465be 712 ProSitePatterns PS00850 Glycine radical domain signature. 676 684 - T 22-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site YE0482 93272c2322baf311b4b77fb678c465be 712 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 115 705 1.9E-204 T 22-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 YE0482 93272c2322baf311b4b77fb678c465be 712 SUPERFAMILY SSF51998 121 687 3.66E-193 T 22-04-2016 YE1613 13a8f301bfefe35fea21cc0a7ab9a893 167 PANTHER PTHR26402 1 160 4.0E-60 T 22-04-2016 YE1613 13a8f301bfefe35fea21cc0a7ab9a893 167 Pfam PF00072 Response regulator receiver domain 2 86 1.9E-18 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE1613 13a8f301bfefe35fea21cc0a7ab9a893 167 SUPERFAMILY SSF52172 7 131 5.69E-22 T 22-04-2016 IPR011006 CheY-like superfamily YE1613 13a8f301bfefe35fea21cc0a7ab9a893 167 PANTHER PTHR26402:SF599 1 160 4.0E-60 T 22-04-2016 YE1613 13a8f301bfefe35fea21cc0a7ab9a893 167 Gene3D G3DSA:3.40.50.2300 3 113 1.1E-20 T 22-04-2016 YE1613 13a8f301bfefe35fea21cc0a7ab9a893 167 Gene3D G3DSA:1.10.10.10 114 162 1.5E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1613 13a8f301bfefe35fea21cc0a7ab9a893 167 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 109 123 1.4E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE1613 13a8f301bfefe35fea21cc0a7ab9a893 167 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 139 151 1.4E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE1613 13a8f301bfefe35fea21cc0a7ab9a893 167 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 123 139 1.4E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE1613 13a8f301bfefe35fea21cc0a7ab9a893 167 SMART SM00421 106 163 7.6E-19 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE1613 13a8f301bfefe35fea21cc0a7ab9a893 167 Pfam PF00196 Bacterial regulatory proteins, luxR family 108 162 2.0E-18 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE0112 1fd8f671539b6b228cf1acbbc3551593 811 SUPERFAMILY SSF53633 13 300 9.61E-57 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YE0112 1fd8f671539b6b228cf1acbbc3551593 811 SUPERFAMILY SSF55347 609 792 1.24E-46 T 22-04-2016 YE0112 1fd8f671539b6b228cf1acbbc3551593 811 Pfam PF00696 Amino acid kinase family 13 285 7.8E-41 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YE0112 1fd8f671539b6b228cf1acbbc3551593 811 PANTHER PTHR21499:SF29 387 811 1.4E-247 T 22-04-2016 YE0112 1fd8f671539b6b228cf1acbbc3551593 811 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 16 454 8.3E-64 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 YE0112 1fd8f671539b6b228cf1acbbc3551593 811 Gene3D G3DSA:3.40.1160.10 115 300 1.4E-46 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YE0112 1fd8f671539b6b228cf1acbbc3551593 811 Gene3D G3DSA:3.40.1160.10 13 60 1.4E-46 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YE0112 1fd8f671539b6b228cf1acbbc3551593 811 Gene3D G3DSA:3.30.360.10 630 787 3.5E-52 T 22-04-2016 YE0112 1fd8f671539b6b228cf1acbbc3551593 811 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 655 677 - T 22-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 YE0112 1fd8f671539b6b228cf1acbbc3551593 811 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 466 601 3.9E-22 T 22-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 YE0112 1fd8f671539b6b228cf1acbbc3551593 811 Pfam PF00742 Homoserine dehydrogenase 609 804 2.5E-43 T 22-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 YE0112 1fd8f671539b6b228cf1acbbc3551593 811 PIRSF PIRSF000727 13 811 1.2E-291 T 22-04-2016 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00050|UniPathway: UPA00051|UniPathway: UPA00051 YE0112 1fd8f671539b6b228cf1acbbc3551593 811 PANTHER PTHR21499 387 811 1.4E-247 T 22-04-2016 YE0112 1fd8f671539b6b228cf1acbbc3551593 811 ProSitePatterns PS00324 Aspartokinase signature. 15 23 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 YE0112 1fd8f671539b6b228cf1acbbc3551593 811 SUPERFAMILY SSF51735 458 631 1.86E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain YE0112 1fd8f671539b6b228cf1acbbc3551593 811 Gene3D G3DSA:3.40.50.720 458 629 9.7E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3683 403b2337ca7920e366f0e64c4ba1a9c1 582 SUPERFAMILY SSF117023 447 578 7.72E-47 T 22-04-2016 YE3683 403b2337ca7920e366f0e64c4ba1a9c1 582 Gene3D G3DSA:1.10.860.10 437 580 1.7E-54 T 22-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal YE3683 403b2337ca7920e366f0e64c4ba1a9c1 582 Hamap MF_00974 DNA primase [dnaG]. 4 576 30.561 T 22-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 YE3683 403b2337ca7920e366f0e64c4ba1a9c1 582 Gene3D G3DSA:3.90.580.10 1 101 8.3E-41 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 YE3683 403b2337ca7920e366f0e64c4ba1a9c1 582 Pfam PF08278 DNA primase DnaG DnaB-binding 451 574 1.2E-35 T 22-04-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 YE3683 403b2337ca7920e366f0e64c4ba1a9c1 582 TIGRFAM TIGR01391 dnaG: DNA primase 4 419 5.0E-151 T 22-04-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 YE3683 403b2337ca7920e366f0e64c4ba1a9c1 582 Pfam PF08275 DNA primase catalytic core, N-terminal domain 126 251 4.8E-44 T 22-04-2016 IPR013264 DNA primase, catalytic core, N-terminal YE3683 403b2337ca7920e366f0e64c4ba1a9c1 582 Gene3D G3DSA:3.90.980.10 115 240 2.9E-48 T 22-04-2016 IPR013264 DNA primase, catalytic core, N-terminal YE3683 403b2337ca7920e366f0e64c4ba1a9c1 582 Pfam PF10410 DnaB-helicase binding domain of primase 370 424 1.7E-12 T 22-04-2016 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 YE3683 403b2337ca7920e366f0e64c4ba1a9c1 582 Gene3D G3DSA:3.40.1360.10 241 367 2.1E-47 T 22-04-2016 YE3683 403b2337ca7920e366f0e64c4ba1a9c1 582 Pfam PF13155 Toprim-like 263 348 5.1E-15 T 22-04-2016 YE3683 403b2337ca7920e366f0e64c4ba1a9c1 582 PIRSF PIRSF002811 2 581 3.1E-147 T 22-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 YE3683 403b2337ca7920e366f0e64c4ba1a9c1 582 Gene3D G3DSA:1.20.50.20 368 426 1.3E-27 T 22-04-2016 YE3683 403b2337ca7920e366f0e64c4ba1a9c1 582 SUPERFAMILY SSF56731 115 427 1.05E-114 T 22-04-2016 YE3683 403b2337ca7920e366f0e64c4ba1a9c1 582 Pfam PF01807 CHC2 zinc finger 7 100 1.0E-40 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 YE3683 403b2337ca7920e366f0e64c4ba1a9c1 582 PANTHER PTHR30313 3 580 3.0E-185 T 22-04-2016 YE3683 403b2337ca7920e366f0e64c4ba1a9c1 582 SMART SM00766 450 575 1.1E-55 T 22-04-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 YE3683 403b2337ca7920e366f0e64c4ba1a9c1 582 SUPERFAMILY SSF57783 4 100 2.21E-35 T 22-04-2016 YE3683 403b2337ca7920e366f0e64c4ba1a9c1 582 SMART SM00493 259 330 1.8E-22 T 22-04-2016 IPR006171 Toprim domain YE3683 403b2337ca7920e366f0e64c4ba1a9c1 582 SMART SM00400 36 90 1.4E-36 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 YE2857 74a7ec8b15442d1e784bf826ccf2202f 436 Pfam PF05426 Alginate lyase 92 372 1.5E-90 T 22-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 YE2857 74a7ec8b15442d1e784bf826ccf2202f 436 Gene3D G3DSA:1.50.10.110 74 404 1.8E-88 T 22-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 YE2857 74a7ec8b15442d1e784bf826ccf2202f 436 SUPERFAMILY SSF48230 98 375 7.69E-57 T 22-04-2016 IPR008929 Chondroitin AC/alginate lyase YE2857 74a7ec8b15442d1e784bf826ccf2202f 436 PANTHER PTHR41379 8 380 9.2E-81 T 22-04-2016 YE2857 74a7ec8b15442d1e784bf826ccf2202f 436 PANTHER PTHR41379:SF1 8 380 9.2E-81 T 22-04-2016 YE2891 2e352a39de8870c0bddd837822289b37 328 SUPERFAMILY SSF111369 41 119 1.2E-8 T 22-04-2016 YE2891 2e352a39de8870c0bddd837822289b37 328 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 34 289 6.8E-17 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YE2891 2e352a39de8870c0bddd837822289b37 328 PANTHER PTHR32347 26 325 1.1E-78 T 22-04-2016 YE2891 2e352a39de8870c0bddd837822289b37 328 PANTHER PTHR32347:SF12 26 325 1.1E-78 T 22-04-2016 YE2891 2e352a39de8870c0bddd837822289b37 328 Gene3D G3DSA:2.40.50.100 44 77 1.6E-12 T 22-04-2016 YE2891 2e352a39de8870c0bddd837822289b37 328 Gene3D G3DSA:2.40.50.100 204 235 1.6E-12 T 22-04-2016 YE2891 2e352a39de8870c0bddd837822289b37 328 SUPERFAMILY SSF111369 178 324 7.98E-13 T 22-04-2016 YE2891 2e352a39de8870c0bddd837822289b37 328 Hamap MF_01304 UPF0194 membrane protein YbhG [ybhG]. 2 328 51.177 T 22-04-2016 IPR022936 Uncharacterised protein family UPF0194, membrane protein YbhG YE3067 2e03af4a361be1d73a963f0ddb62892d 368 SUPERFAMILY SSF103473 3 363 9.29E-53 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE3067 2e03af4a361be1d73a963f0ddb62892d 368 Gene3D G3DSA:1.20.1250.20 3 165 2.0E-19 T 22-04-2016 YE3067 2e03af4a361be1d73a963f0ddb62892d 368 Gene3D G3DSA:1.20.1250.20 192 363 1.0E-19 T 22-04-2016 YE3067 2e03af4a361be1d73a963f0ddb62892d 368 PANTHER PTHR23505:SF8 1 368 5.0E-154 T 22-04-2016 YE3067 2e03af4a361be1d73a963f0ddb62892d 368 PANTHER PTHR23505 1 368 5.0E-154 T 22-04-2016 YE3067 2e03af4a361be1d73a963f0ddb62892d 368 Pfam PF07690 Major Facilitator Superfamily 3 217 4.3E-20 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YE2796 0b488bd8f7953425735314f50d3bb72d 92 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 84 8.5E-26 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC YE2796 0b488bd8f7953425735314f50d3bb72d 92 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 1.0E-21 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC YE2796 0b488bd8f7953425735314f50d3bb72d 92 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 47 63 1.0E-21 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC YE2796 0b488bd8f7953425735314f50d3bb72d 92 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 65 77 1.0E-21 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC YE2796 0b488bd8f7953425735314f50d3bb72d 92 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 20 36 1.0E-21 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC YE2796 0b488bd8f7953425735314f50d3bb72d 92 SUPERFAMILY SSF159127 1 87 6.54E-28 T 22-04-2016 YE2796 0b488bd8f7953425735314f50d3bb72d 92 ProSitePatterns PS01097 Hydrogenases expression/synthesis hupF/hypC family signature. 1 9 - T 22-04-2016 IPR019812 Hydrogenase assembly chaperone, conserved site YE2796 0b488bd8f7953425735314f50d3bb72d 92 Pfam PF01455 HupF/HypC family 1 74 1.1E-26 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC YE2796 0b488bd8f7953425735314f50d3bb72d 92 PANTHER PTHR35177 2 88 5.1E-25 T 22-04-2016 YE2796 0b488bd8f7953425735314f50d3bb72d 92 PANTHER PTHR35177:SF1 2 88 5.1E-25 T 22-04-2016 YE0007 8a7a8d4dbae7e95a7e6b19be6808b48e 575 PANTHER PTHR30540:SF7 2 575 2.6E-260 T 22-04-2016 YE0007 8a7a8d4dbae7e95a7e6b19be6808b48e 575 TIGRFAM TIGR00794 kup: potassium uptake protein 50 503 4.2E-185 T 22-04-2016 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 YE0007 8a7a8d4dbae7e95a7e6b19be6808b48e 575 PANTHER PTHR30540 2 575 2.6E-260 T 22-04-2016 YE0007 8a7a8d4dbae7e95a7e6b19be6808b48e 575 Pfam PF02705 K+ potassium transporter 2 497 1.4E-193 T 22-04-2016 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 YE0007 8a7a8d4dbae7e95a7e6b19be6808b48e 575 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 1 575 30.405 T 22-04-2016 IPR023051 Potassium uptake protein, low affinity, Kup YE1688 5c41193fb9f94bad3127136ac5bb3684 75 Pfam PF10809 Protein of unknown function (DUF2732) 1 69 6.3E-16 T 22-04-2016 IPR020126 Protein of unknown function DUF2732 YE1688 5c41193fb9f94bad3127136ac5bb3684 75 ProDom PD057914 C0939 STY4639 GPA GP33 PRECURSOR FELS-2 5'REGION STY3665 SIGNAL PHAGE-RELATED 14 75 1.0E-4 T 22-04-2016 IPR020126 Protein of unknown function DUF2732 YE2664 f9434e827058660f048b0e3afcebd727 176 SUPERFAMILY SSF49401 25 175 5.97E-27 T 22-04-2016 IPR008966 Adhesion domain YE2664 f9434e827058660f048b0e3afcebd727 176 PANTHER PTHR33420 1 176 5.5E-52 T 22-04-2016 YE2664 f9434e827058660f048b0e3afcebd727 176 Gene3D G3DSA:2.60.40.1090 25 176 8.7E-25 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YE2664 f9434e827058660f048b0e3afcebd727 176 PANTHER PTHR33420:SF10 1 176 5.5E-52 T 22-04-2016 YE2664 f9434e827058660f048b0e3afcebd727 176 Pfam PF00419 Fimbrial protein 26 175 2.9E-12 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YE3638 f6b270651defdb69e0c2e8a80ab87efa 424 SUPERFAMILY SSF52540 49 352 4.05E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3638 f6b270651defdb69e0c2e8a80ab87efa 424 Gene3D G3DSA:3.40.50.300 169 384 6.0E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3638 f6b270651defdb69e0c2e8a80ab87efa 424 PANTHER PTHR30258:SF3 4 415 5.5E-133 T 22-04-2016 YE3638 f6b270651defdb69e0c2e8a80ab87efa 424 PANTHER PTHR30258 4 415 5.5E-133 T 22-04-2016 YE3638 f6b270651defdb69e0c2e8a80ab87efa 424 Gene3D G3DSA:3.30.450.90 66 163 3.6E-32 T 22-04-2016 YE3638 f6b270651defdb69e0c2e8a80ab87efa 424 Pfam PF00437 Type II/IV secretion system protein 70 345 4.1E-82 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 YE2771 0823626b398482c3ec7e87f2b182f7f5 258 PANTHER PTHR21235 1 258 3.8E-117 T 22-04-2016 YE2771 0823626b398482c3ec7e87f2b182f7f5 258 Gene3D G3DSA:3.20.20.70 4 257 4.6E-85 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YE2771 0823626b398482c3ec7e87f2b182f7f5 258 SUPERFAMILY SSF51366 1 257 7.77E-72 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 YE2771 0823626b398482c3ec7e87f2b182f7f5 258 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 43.966 T 22-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 YE2771 0823626b398482c3ec7e87f2b182f7f5 258 Pfam PF00977 Histidine biosynthesis protein 5 239 4.2E-76 T 22-04-2016 IPR006062 Histidine biosynthesis GO:0000105 YE2771 0823626b398482c3ec7e87f2b182f7f5 258 PANTHER PTHR21235:SF2 1 258 3.8E-117 T 22-04-2016 YE2771 0823626b398482c3ec7e87f2b182f7f5 258 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 5.6E-114 T 22-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 YE0176 46d663786663c5446a2e38cf8088abee 376 TIGRFAM TIGR02379 ECA_wecE: TDP-4-keto-6-deoxy-D-glucose transaminase 1 375 7.9E-214 T 22-04-2016 IPR012749 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE-like MetaCyc: PWY-7315|UniPathway: UPA00566 YE0176 46d663786663c5446a2e38cf8088abee 376 Gene3D G3DSA:3.90.1150.10 251 375 2.1E-21 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YE0176 46d663786663c5446a2e38cf8088abee 376 PANTHER PTHR30244:SF14 1 376 6.0E-301 T 22-04-2016 YE0176 46d663786663c5446a2e38cf8088abee 376 SUPERFAMILY SSF53383 2 375 2.58E-101 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YE0176 46d663786663c5446a2e38cf8088abee 376 Gene3D G3DSA:3.40.640.10 1 248 3.9E-78 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YE0176 46d663786663c5446a2e38cf8088abee 376 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 16 371 2.1E-85 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase YE0176 46d663786663c5446a2e38cf8088abee 376 Hamap MF_02026 dTDP-4-amino-4,6-dideoxygalactose transaminase [wecE]. 1 376 79.356 T 22-04-2016 IPR032894 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE GO:0009246|GO:0019180 MetaCyc: PWY-7315|UniPathway: UPA00566 YE0176 46d663786663c5446a2e38cf8088abee 376 PIRSF PIRSF000390 1 376 1.4E-116 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase YE0176 46d663786663c5446a2e38cf8088abee 376 PANTHER PTHR30244 1 376 6.0E-301 T 22-04-2016 YE3123 e72ff755e8e0a8bdf3f5434c7da1d2f8 153 SUPERFAMILY SSF46785 2 92 2.63E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3123 e72ff755e8e0a8bdf3f5434c7da1d2f8 153 Gene3D G3DSA:1.10.10.10 3 54 2.0E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3123 e72ff755e8e0a8bdf3f5434c7da1d2f8 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 2 49 1.1E-16 T 22-04-2016 YE3123 e72ff755e8e0a8bdf3f5434c7da1d2f8 153 Gene3D G3DSA:3.30.70.920 55 139 2.4E-29 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain YE3123 e72ff755e8e0a8bdf3f5434c7da1d2f8 153 SUPERFAMILY SSF54909 62 151 1.74E-21 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel YE3123 e72ff755e8e0a8bdf3f5434c7da1d2f8 153 Pfam PF01037 Lrp/AsnC ligand binding domain 68 141 1.7E-20 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain YE3123 e72ff755e8e0a8bdf3f5434c7da1d2f8 153 SMART SM00344 2 111 4.6E-37 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 YE3123 e72ff755e8e0a8bdf3f5434c7da1d2f8 153 PANTHER PTHR30154:SF17 1 151 5.8E-103 T 22-04-2016 YE3123 e72ff755e8e0a8bdf3f5434c7da1d2f8 153 PANTHER PTHR30154 1 151 5.8E-103 T 22-04-2016 YE3123 e72ff755e8e0a8bdf3f5434c7da1d2f8 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 4.6E-9 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 YE3123 e72ff755e8e0a8bdf3f5434c7da1d2f8 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 4.6E-9 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 YE1197 e5062eb0459c6f5e3e4ed60cf5a816d9 363 Pfam PF00005 ABC transporter 18 164 1.8E-36 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE1197 e5062eb0459c6f5e3e4ed60cf5a816d9 363 Gene3D G3DSA:3.40.50.300 3 244 2.7E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1197 e5062eb0459c6f5e3e4ed60cf5a816d9 363 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE1197 e5062eb0459c6f5e3e4ed60cf5a816d9 363 SUPERFAMILY SSF52540 3 244 7.52E-87 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1197 e5062eb0459c6f5e3e4ed60cf5a816d9 363 PANTHER PTHR24220 4 281 3.2E-142 T 22-04-2016 YE1197 e5062eb0459c6f5e3e4ed60cf5a816d9 363 PANTHER PTHR24220:SF123 4 281 3.2E-142 T 22-04-2016 YE1197 e5062eb0459c6f5e3e4ed60cf5a816d9 363 SMART SM00382 27 214 1.6E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain YE1197 e5062eb0459c6f5e3e4ed60cf5a816d9 363 SUPERFAMILY SSF50331 239 326 2.44E-9 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal YE1197 e5062eb0459c6f5e3e4ed60cf5a816d9 363 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 243 3.5E-126 T 22-04-2016 IPR005666 Sulphate transport system permease protein 1 GO:0006810|GO:0016020|GO:0042626 KEGG: 00920+3.6.3.25 YE0436 4107f0ba0b7f878f3baa93c91d07c37f 329 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 33 180 4.1E-57 T 22-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 YE0436 4107f0ba0b7f878f3baa93c91d07c37f 329 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 181 248 6.1E-24 T 22-04-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal YE0436 4107f0ba0b7f878f3baa93c91d07c37f 329 SUPERFAMILY SSF88697 251 310 6.96E-14 T 22-04-2016 IPR015947 PUA-like domain YE0436 4107f0ba0b7f878f3baa93c91d07c37f 329 PANTHER PTHR13767:SF2 3 309 7.3E-133 T 22-04-2016 YE0436 4107f0ba0b7f878f3baa93c91d07c37f 329 PANTHER PTHR13767 3 309 7.3E-133 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 YE0436 4107f0ba0b7f878f3baa93c91d07c37f 329 Gene3D G3DSA:2.30.130.10 250 312 1.5E-28 T 22-04-2016 IPR015947 PUA-like domain YE0436 4107f0ba0b7f878f3baa93c91d07c37f 329 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 11 309 18.868 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 YE0436 4107f0ba0b7f878f3baa93c91d07c37f 329 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 252 309 2.0E-20 T 22-04-2016 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 YE0436 4107f0ba0b7f878f3baa93c91d07c37f 329 SUPERFAMILY SSF55120 10 248 4.32E-82 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 YE0436 4107f0ba0b7f878f3baa93c91d07c37f 329 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 11 219 2.3E-89 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 YE0853 75ff45016401d0be5711d68e99679a57 332 Gene3D G3DSA:1.10.443.10 161 315 1.7E-35 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 YE0853 75ff45016401d0be5711d68e99679a57 332 PANTHER PTHR30349:SF20 63 315 1.8E-38 T 22-04-2016 YE0853 75ff45016401d0be5711d68e99679a57 332 Pfam PF00589 Phage integrase family 164 306 7.7E-20 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 YE0853 75ff45016401d0be5711d68e99679a57 332 SUPERFAMILY SSF56349 61 314 6.47E-48 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YE0853 75ff45016401d0be5711d68e99679a57 332 Gene3D G3DSA:1.10.150.130 61 156 2.4E-4 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal YE0853 75ff45016401d0be5711d68e99679a57 332 PANTHER PTHR30349 63 315 1.8E-38 T 22-04-2016 YE0744 8a6ddb7405bc92110494f6d14e69bfc7 744 Pfam PF13291 ACT domain 664 740 7.8E-18 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 YE0744 8a6ddb7405bc92110494f6d14e69bfc7 744 Pfam PF04607 Region found in RelA / SpoT proteins 251 360 1.6E-36 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 YE0744 8a6ddb7405bc92110494f6d14e69bfc7 744 PANTHER PTHR21262:SF5 55 743 0.0 T 22-04-2016 YE0744 8a6ddb7405bc92110494f6d14e69bfc7 744 SUPERFAMILY SSF81301 196 409 1.8E-64 T 22-04-2016 YE0744 8a6ddb7405bc92110494f6d14e69bfc7 744 PANTHER PTHR21262 55 743 0.0 T 22-04-2016 YE0744 8a6ddb7405bc92110494f6d14e69bfc7 744 SUPERFAMILY SSF55021 665 741 1.22E-13 T 22-04-2016 YE0744 8a6ddb7405bc92110494f6d14e69bfc7 744 Pfam PF13328 HD domain 46 191 2.7E-41 T 22-04-2016 IPR003607 HD/PDEase domain YE0744 8a6ddb7405bc92110494f6d14e69bfc7 744 Gene3D G3DSA:3.30.460.10 193 341 2.5E-51 T 22-04-2016 YE0744 8a6ddb7405bc92110494f6d14e69bfc7 744 SMART SM00954 251 361 3.5E-66 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 YE0744 8a6ddb7405bc92110494f6d14e69bfc7 744 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 64 739 1.4E-187 T 22-04-2016 IPR004811 RelA/SpoT family GO:0015969 YE0744 8a6ddb7405bc92110494f6d14e69bfc7 744 SUPERFAMILY SSF109604 27 207 2.26E-45 T 22-04-2016 YE0744 8a6ddb7405bc92110494f6d14e69bfc7 744 Gene3D G3DSA:3.30.70.260 664 739 3.9E-27 T 22-04-2016 YE0744 8a6ddb7405bc92110494f6d14e69bfc7 744 Pfam PF02824 TGS domain 405 464 1.2E-21 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 YE0744 8a6ddb7405bc92110494f6d14e69bfc7 744 Gene3D G3DSA:3.10.20.30 405 466 5.2E-26 T 22-04-2016 IPR012675 Beta-grasp domain YE0744 8a6ddb7405bc92110494f6d14e69bfc7 744 SUPERFAMILY SSF81271 398 464 2.62E-22 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 YE1367 0a80c20de734e1e553c94fac45448b5d 168 Hamap MF_00761 UPF0303 protein . 2 155 33.824 T 22-04-2016 IPR010371 Uncharacterised protein family UPF0303 YE1367 0a80c20de734e1e553c94fac45448b5d 168 SUPERFAMILY SSF143744 14 152 1.96E-25 T 22-04-2016 YE1367 0a80c20de734e1e553c94fac45448b5d 168 PANTHER PTHR28255 1 164 4.0E-52 T 22-04-2016 YE1367 0a80c20de734e1e553c94fac45448b5d 168 PANTHER PTHR28255:SF1 1 164 4.0E-52 T 22-04-2016 YE1367 0a80c20de734e1e553c94fac45448b5d 168 PIRSF PIRSF008757 1 164 6.6E-59 T 22-04-2016 IPR010371 Uncharacterised protein family UPF0303 YE1367 0a80c20de734e1e553c94fac45448b5d 168 Pfam PF03928 Haem-degrading 22 147 2.3E-27 T 22-04-2016 IPR005624 Haem-degrading YE3244 4c83c6d8a48e5871b8dde6f3140b62ad 368 PANTHER PTHR12029:SF57 1 366 9.9E-199 T 22-04-2016 YE3244 4c83c6d8a48e5871b8dde6f3140b62ad 368 PIRSF PIRSF006280 1 368 2.5E-175 T 22-04-2016 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted GO:0008168 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- YE3244 4c83c6d8a48e5871b8dde6f3140b62ad 368 Gene3D G3DSA:3.30.1330.30 118 195 2.3E-8 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like YE3244 4c83c6d8a48e5871b8dde6f3140b62ad 368 SUPERFAMILY SSF75217 213 367 3.01E-39 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases YE3244 4c83c6d8a48e5871b8dde6f3140b62ad 368 SUPERFAMILY SSF55315 119 196 1.0E-9 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like YE3244 4c83c6d8a48e5871b8dde6f3140b62ad 368 SMART SM00967 126 201 2.2E-8 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 YE3244 4c83c6d8a48e5871b8dde6f3140b62ad 368 Gene3D G3DSA:3.40.1280.10 210 366 2.0E-39 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YE3244 4c83c6d8a48e5871b8dde6f3140b62ad 368 Pfam PF00588 SpoU rRNA Methylase family 222 359 7.6E-31 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 YE3244 4c83c6d8a48e5871b8dde6f3140b62ad 368 PANTHER PTHR12029 1 366 9.9E-199 T 22-04-2016 YE3244 4c83c6d8a48e5871b8dde6f3140b62ad 368 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 127 199 1.6E-11 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 YE2472 b2e584d2c8b56e966f17b53274ee8a1e 335 PANTHER PTHR30365:SF4 1 335 4.3E-176 T 22-04-2016 YE2472 b2e584d2c8b56e966f17b53274ee8a1e 335 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 5 324 5.7E-101 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 YE2472 b2e584d2c8b56e966f17b53274ee8a1e 335 PIRSF PIRSF000267 2 335 3.0E-90 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 YE2472 b2e584d2c8b56e966f17b53274ee8a1e 335 PANTHER PTHR30365 1 335 4.3E-176 T 22-04-2016 YE2472 b2e584d2c8b56e966f17b53274ee8a1e 335 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 6 213 9.0E-44 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 YE2647 7987511c9178f6b456cfa2dbf741e734 487 PIRSF PIRSF002457 1 487 1.5E-157 T 22-04-2016 IPR030676 Citrate carrier CitT-related YE2647 7987511c9178f6b456cfa2dbf741e734 487 PANTHER PTHR10283:SF13 1 69 1.6E-186 T 22-04-2016 IPR030676 Citrate carrier CitT-related YE2647 7987511c9178f6b456cfa2dbf741e734 487 PANTHER PTHR10283:SF13 88 485 1.6E-186 T 22-04-2016 IPR030676 Citrate carrier CitT-related YE2647 7987511c9178f6b456cfa2dbf741e734 487 PANTHER PTHR10283 1 69 1.6E-186 T 22-04-2016 YE2647 7987511c9178f6b456cfa2dbf741e734 487 PANTHER PTHR10283 88 485 1.6E-186 T 22-04-2016 YE2647 7987511c9178f6b456cfa2dbf741e734 487 Pfam PF00939 Sodium:sulfate symporter transmembrane region 5 485 8.7E-174 T 22-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 YE2647 7987511c9178f6b456cfa2dbf741e734 487 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 25 480 7.8E-164 T 22-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 YE0586 2fa498e3b1599cbe9ca46bfc56d73c29 407 PANTHER PTHR10799 109 380 5.7E-53 T 22-04-2016 YE0586 2fa498e3b1599cbe9ca46bfc56d73c29 407 Gene3D G3DSA:3.30.70.270 227 378 2.4E-52 T 22-04-2016 YE0586 2fa498e3b1599cbe9ca46bfc56d73c29 407 PANTHER PTHR10799:SF774 109 380 5.7E-53 T 22-04-2016 YE0586 2fa498e3b1599cbe9ca46bfc56d73c29 407 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 221 378 1.1E-44 T 22-04-2016 IPR000160 GGDEF domain YE0586 2fa498e3b1599cbe9ca46bfc56d73c29 407 Pfam PF00990 Diguanylate cyclase, GGDEF domain 225 378 7.4E-49 T 22-04-2016 IPR000160 GGDEF domain YE0586 2fa498e3b1599cbe9ca46bfc56d73c29 407 Pfam PF17152 Periplasmic sensor domain 21 122 2.6E-31 T 22-04-2016 IPR033417 Periplasmic sensor domain CHASE8 UniPathway: UPA00599 YE0586 2fa498e3b1599cbe9ca46bfc56d73c29 407 SUPERFAMILY SSF55073 230 380 6.75E-47 T 22-04-2016 IPR029787 Nucleotide cyclase YE0586 2fa498e3b1599cbe9ca46bfc56d73c29 407 SMART SM00267 214 386 5.6E-62 T 22-04-2016 IPR000160 GGDEF domain YE2548 298c9744aef447aa112f2719f7b0b59e 89 PANTHER PTHR34040:SF2 1 89 4.0E-36 T 22-04-2016 YE2548 298c9744aef447aa112f2719f7b0b59e 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 88 4.5E-33 T 22-04-2016 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 YE2548 298c9744aef447aa112f2719f7b0b59e 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 1.4E-23 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YE2548 298c9744aef447aa112f2719f7b0b59e 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 1.4E-23 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YE2548 298c9744aef447aa112f2719f7b0b59e 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 1.4E-23 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YE2548 298c9744aef447aa112f2719f7b0b59e 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 9.4E-30 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YE2548 298c9744aef447aa112f2719f7b0b59e 89 PANTHER PTHR34040 1 89 4.0E-36 T 22-04-2016 YE2548 298c9744aef447aa112f2719f7b0b59e 89 PIRSF PIRSF004669 1 89 1.3E-32 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YE1787 6e5a8746b714ee947982c39fd2d1593f 102 SMART SM01022 5 101 5.6E-25 T 22-04-2016 IPR007374 ASCH domain YE1787 6e5a8746b714ee947982c39fd2d1593f 102 Gene3D G3DSA:2.30.130.30 2 100 8.4E-45 T 22-04-2016 YE1787 6e5a8746b714ee947982c39fd2d1593f 102 PANTHER PTHR38088:SF2 1 102 1.8E-66 T 22-04-2016 YE1787 6e5a8746b714ee947982c39fd2d1593f 102 SUPERFAMILY SSF88697 2 100 7.12E-33 T 22-04-2016 IPR015947 PUA-like domain YE1787 6e5a8746b714ee947982c39fd2d1593f 102 PIRSF PIRSF029143 1 102 7.5E-49 T 22-04-2016 IPR008314 Uncharacterised conserved protein UCP029143 YE1787 6e5a8746b714ee947982c39fd2d1593f 102 Pfam PF04266 ASCH domain 6 98 4.1E-14 T 22-04-2016 IPR007374 ASCH domain YE1787 6e5a8746b714ee947982c39fd2d1593f 102 Hamap MF_00684 UPF0267 protein YqfB [yqfB]. 1 102 31.883 T 22-04-2016 IPR008314 Uncharacterised conserved protein UCP029143 YE1787 6e5a8746b714ee947982c39fd2d1593f 102 PANTHER PTHR38088 1 102 1.8E-66 T 22-04-2016 YE1337 72ccd39e8952836bd8377518cca7de6d 220 SUPERFAMILY SSF56784 6 205 1.87E-44 T 22-04-2016 IPR023214 HAD-like domain YE1337 72ccd39e8952836bd8377518cca7de6d 220 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 81 183 9.6E-15 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YE1337 72ccd39e8952836bd8377518cca7de6d 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 5 16 5.8E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YE1337 72ccd39e8952836bd8377518cca7de6d 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 145 165 5.8E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YE1337 72ccd39e8952836bd8377518cca7de6d 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 127 143 5.8E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YE1337 72ccd39e8952836bd8377518cca7de6d 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 97 110 5.8E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YE1337 72ccd39e8952836bd8377518cca7de6d 220 Gene3D G3DSA:1.10.150.240 21 65 1.0E-6 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 YE1337 72ccd39e8952836bd8377518cca7de6d 220 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 183 1.3E-23 T 22-04-2016 IPR023214 HAD-like domain YE1337 72ccd39e8952836bd8377518cca7de6d 220 PANTHER PTHR18901 1 219 9.1E-139 T 22-04-2016 YE1337 72ccd39e8952836bd8377518cca7de6d 220 PANTHER PTHR18901:SF20 1 219 9.1E-139 T 22-04-2016 YE1337 72ccd39e8952836bd8377518cca7de6d 220 Gene3D G3DSA:3.40.50.1000 66 210 1.6E-44 T 22-04-2016 IPR023214 HAD-like domain YE2066 3580acda85a3611f6dea6b9f456bf65a 443 TIGRFAM TIGR00885 fucP: L-fucose:H+ symporter permease 20 422 1.3E-100 T 22-04-2016 IPR005275 L-fucose permease FucP GO:0015150|GO:0015756 YE2066 3580acda85a3611f6dea6b9f456bf65a 443 Gene3D G3DSA:1.20.1250.20 22 223 3.5E-13 T 22-04-2016 YE2066 3580acda85a3611f6dea6b9f456bf65a 443 Pfam PF07690 Major Facilitator Superfamily 44 276 4.3E-14 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YE2066 3580acda85a3611f6dea6b9f456bf65a 443 PANTHER PTHR23514:SF11 3 179 7.4E-195 T 22-04-2016 YE2066 3580acda85a3611f6dea6b9f456bf65a 443 PANTHER PTHR23514:SF11 197 442 7.4E-195 T 22-04-2016 YE2066 3580acda85a3611f6dea6b9f456bf65a 443 SUPERFAMILY SSF103473 21 170 2.09E-37 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE2066 3580acda85a3611f6dea6b9f456bf65a 443 SUPERFAMILY SSF103473 202 432 2.09E-37 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE2066 3580acda85a3611f6dea6b9f456bf65a 443 PANTHER PTHR23514 3 179 7.4E-195 T 22-04-2016 YE2066 3580acda85a3611f6dea6b9f456bf65a 443 PANTHER PTHR23514 197 442 7.4E-195 T 22-04-2016 YE2066 3580acda85a3611f6dea6b9f456bf65a 443 Gene3D G3DSA:1.20.1250.20 260 431 9.4E-11 T 22-04-2016 YE4215 a2f5fad23f24aeff548b12c07d334b71 629 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.748 T 22-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 YE4215 a2f5fad23f24aeff548b12c07d334b71 629 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 22-04-2016 IPR020595 MnmG-related, conserved site YE4215 a2f5fad23f24aeff548b12c07d334b71 629 PANTHER PTHR11806 1 629 0.0 T 22-04-2016 YE4215 a2f5fad23f24aeff548b12c07d334b71 629 PANTHER PTHR11806:SF0 1 629 0.0 T 22-04-2016 YE4215 a2f5fad23f24aeff548b12c07d334b71 629 SUPERFAMILY SSF51905 6 66 5.65E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE4215 a2f5fad23f24aeff548b12c07d334b71 629 SUPERFAMILY SSF51905 97 261 5.65E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE4215 a2f5fad23f24aeff548b12c07d334b71 629 Gene3D G3DSA:3.50.50.60 6 232 2.1E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE4215 a2f5fad23f24aeff548b12c07d334b71 629 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 22-04-2016 IPR020595 MnmG-related, conserved site YE4215 a2f5fad23f24aeff548b12c07d334b71 629 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 4.3E-295 T 22-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 YE4215 a2f5fad23f24aeff548b12c07d334b71 629 SMART SM01228 546 617 4.1E-45 T 22-04-2016 YE4215 a2f5fad23f24aeff548b12c07d334b71 629 Pfam PF01134 Glucose inhibited division protein A 8 398 2.4E-169 T 22-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 YE4215 a2f5fad23f24aeff548b12c07d334b71 629 Pfam PF13932 GidA associated domain 403 616 2.1E-71 T 22-04-2016 IPR026904 GidA associated domain 3 YE2867 1ab9eef4d9ae2b97d0db14076abd6fbc 376 Gene3D G3DSA:3.30.360.10 325 373 6.9E-46 T 22-04-2016 YE2867 1ab9eef4d9ae2b97d0db14076abd6fbc 376 Gene3D G3DSA:3.30.360.10 150 277 6.9E-46 T 22-04-2016 YE2867 1ab9eef4d9ae2b97d0db14076abd6fbc 376 PANTHER PTHR22604 1 373 3.5E-96 T 22-04-2016 YE2867 1ab9eef4d9ae2b97d0db14076abd6fbc 376 SUPERFAMILY SSF51735 3 158 7.39E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2867 1ab9eef4d9ae2b97d0db14076abd6fbc 376 Gene3D G3DSA:3.40.50.720 1 149 3.1E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2867 1ab9eef4d9ae2b97d0db14076abd6fbc 376 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 130 6.3E-25 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 YE2867 1ab9eef4d9ae2b97d0db14076abd6fbc 376 SUPERFAMILY SSF55347 135 310 8.34E-37 T 22-04-2016 YE2867 1ab9eef4d9ae2b97d0db14076abd6fbc 376 PANTHER PTHR22604:SF123 1 373 3.5E-96 T 22-04-2016 YE2867 1ab9eef4d9ae2b97d0db14076abd6fbc 376 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 142 265 1.1E-8 T 22-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 YE3260 5a70cf6a8a68e6138a3a09683f2f59d1 138 Gene3D G3DSA:3.30.160.200 5 107 1.1E-32 T 22-04-2016 YE3260 5a70cf6a8a68e6138a3a09683f2f59d1 138 PANTHER PTHR11075 7 135 1.9E-42 T 22-04-2016 YE3260 5a70cf6a8a68e6138a3a09683f2f59d1 138 Pfam PF00472 RF-1 domain 5 132 4.7E-25 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 YE3260 5a70cf6a8a68e6138a3a09683f2f59d1 138 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 21 37 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 YE3260 5a70cf6a8a68e6138a3a09683f2f59d1 138 SUPERFAMILY SSF75620 7 113 6.67E-14 T 22-04-2016 YE1848 8c2d7fa3405576ecacc857f75789412a 211 Gene3D G3DSA:1.20.1050.10 105 210 9.1E-42 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like YE1848 8c2d7fa3405576ecacc857f75789412a 211 Gene3D G3DSA:3.40.30.10 2 104 1.2E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold YE1848 8c2d7fa3405576ecacc857f75789412a 211 Pfam PF14834 Glutathione S-transferase, C-terminal domain 95 211 2.5E-51 T 22-04-2016 YE1848 8c2d7fa3405576ecacc857f75789412a 211 Pfam PF13417 Glutathione S-transferase, N-terminal domain 15 84 4.6E-11 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 YE1848 8c2d7fa3405576ecacc857f75789412a 211 PANTHER PTHR11260 1 120 2.5E-44 T 22-04-2016 YE1848 8c2d7fa3405576ecacc857f75789412a 211 SUPERFAMILY SSF52833 7 87 2.24E-16 T 22-04-2016 IPR012336 Thioredoxin-like fold YE1848 8c2d7fa3405576ecacc857f75789412a 211 SUPERFAMILY SSF47616 91 209 1.38E-11 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like YE1848 8c2d7fa3405576ecacc857f75789412a 211 PANTHER PTHR11260:SF322 1 120 2.5E-44 T 22-04-2016 YE1725 142b58018e53b265887ee7211d894c2a 417 SUPERFAMILY SSF53659 4 417 9.22E-149 T 22-04-2016 YE1725 142b58018e53b265887ee7211d894c2a 417 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 1 417 8.7E-235 T 22-04-2016 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 YE1725 142b58018e53b265887ee7211d894c2a 417 SMART SM01329 29 413 4.9E-181 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 YE1725 142b58018e53b265887ee7211d894c2a 417 PANTHER PTHR11835 189 256 5.2E-246 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 YE1725 142b58018e53b265887ee7211d894c2a 417 PANTHER PTHR11835 276 417 5.2E-246 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 YE1725 142b58018e53b265887ee7211d894c2a 417 PANTHER PTHR11835 1 165 5.2E-246 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 YE1725 142b58018e53b265887ee7211d894c2a 417 PANTHER PTHR11835:SF52 189 256 5.2E-246 T 22-04-2016 YE1725 142b58018e53b265887ee7211d894c2a 417 PANTHER PTHR11835:SF52 276 417 5.2E-246 T 22-04-2016 YE1725 142b58018e53b265887ee7211d894c2a 417 PANTHER PTHR11835:SF52 1 165 5.2E-246 T 22-04-2016 YE1725 142b58018e53b265887ee7211d894c2a 417 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 304 323 - T 22-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 YE1725 142b58018e53b265887ee7211d894c2a 417 Gene3D G3DSA:3.40.718.10 12 417 4.3E-168 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 YE1725 142b58018e53b265887ee7211d894c2a 417 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 30 413 6.3E-117 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 YE1771 b1c474924a979a2043a7dd0f51d8c5d8 684 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 667 684 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site YE1771 b1c474924a979a2043a7dd0f51d8c5d8 684 Pfam PF00593 TonB dependent receptor 451 682 6.3E-16 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YE1771 b1c474924a979a2043a7dd0f51d8c5d8 684 PANTHER PTHR32552:SF14 30 684 0.0 T 22-04-2016 IPR030149 TonB-dependent siderophore receptor FcuA/FatA GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 YE1771 b1c474924a979a2043a7dd0f51d8c5d8 684 SUPERFAMILY SSF56935 31 684 1.14E-85 T 22-04-2016 YE1771 b1c474924a979a2043a7dd0f51d8c5d8 684 PANTHER PTHR32552 30 684 0.0 T 22-04-2016 YE1771 b1c474924a979a2043a7dd0f51d8c5d8 684 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 40 684 3.4E-149 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 YE1771 b1c474924a979a2043a7dd0f51d8c5d8 684 Pfam PF07715 TonB-dependent Receptor Plug Domain 38 129 3.6E-10 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YE1771 b1c474924a979a2043a7dd0f51d8c5d8 684 Gene3D G3DSA:2.40.170.20 155 684 1.7E-89 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YE1771 b1c474924a979a2043a7dd0f51d8c5d8 684 Gene3D G3DSA:2.170.130.10 34 151 1.4E-20 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YE1293 1ea222f65c3a3e5353cbf1d72ae766ac 443 PIRSF PIRSF006351 5 434 4.4E-134 T 22-04-2016 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 YE1293 1ea222f65c3a3e5353cbf1d72ae766ac 443 PANTHER PTHR33989 3 428 2.2E-139 T 22-04-2016 YE1293 1ea222f65c3a3e5353cbf1d72ae766ac 443 Pfam PF02378 Phosphotransferase system, EIIC 33 352 8.8E-49 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 YE1293 1ea222f65c3a3e5353cbf1d72ae766ac 443 PANTHER PTHR33989:SF4 3 428 2.2E-139 T 22-04-2016 YE1293 1ea222f65c3a3e5353cbf1d72ae766ac 443 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 16 426 1.0E-109 T 22-04-2016 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 YE4055 d195dd1ba3337e76cc1a191d1ab30941 280 PANTHER PTHR37426:SF1 2 280 1.4E-165 T 22-04-2016 YE4055 d195dd1ba3337e76cc1a191d1ab30941 280 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 278 2.3E-112 T 22-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 YE4055 d195dd1ba3337e76cc1a191d1ab30941 280 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 42.183 T 22-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 YE4055 d195dd1ba3337e76cc1a191d1ab30941 280 SUPERFAMILY SSF53335 9 279 1.27E-100 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE4055 d195dd1ba3337e76cc1a191d1ab30941 280 PANTHER PTHR37426 2 280 1.4E-165 T 22-04-2016 YE4055 d195dd1ba3337e76cc1a191d1ab30941 280 Gene3D G3DSA:3.40.50.150 1 280 5.4E-120 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE4055 d195dd1ba3337e76cc1a191d1ab30941 280 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 161 167 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 YE4055 d195dd1ba3337e76cc1a191d1ab30941 280 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 241 247 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 YE3090 e70c011c6182bd6a93ca3e31b8517d46 624 PANTHER PTHR11528:SF44 7 623 0.0 T 22-04-2016 YE3090 e70c011c6182bd6a93ca3e31b8517d46 624 Pfam PF00183 Hsp90 protein 214 623 9.0E-127 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 YE3090 e70c011c6182bd6a93ca3e31b8517d46 624 SUPERFAMILY SSF54211 230 485 3.79E-101 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YE3090 e70c011c6182bd6a93ca3e31b8517d46 624 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 27 36 - T 22-04-2016 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 YE3090 e70c011c6182bd6a93ca3e31b8517d46 624 SUPERFAMILY SSF55874 6 214 4.45E-66 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE3090 e70c011c6182bd6a93ca3e31b8517d46 624 SUPERFAMILY SSF110942 510 623 4.97E-36 T 22-04-2016 YE3090 e70c011c6182bd6a93ca3e31b8517d46 624 Gene3D G3DSA:3.30.565.10 6 216 3.0E-82 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE3090 e70c011c6182bd6a93ca3e31b8517d46 624 Hamap MF_00505 Chaperone protein HtpG [htpG]. 4 623 32.943 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 YE3090 e70c011c6182bd6a93ca3e31b8517d46 624 PRINTS PR00775 90kDa heat shock protein signature 28 50 2.1E-64 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal YE3090 e70c011c6182bd6a93ca3e31b8517d46 624 PRINTS PR00775 90kDa heat shock protein signature 122 144 2.1E-64 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal YE3090 e70c011c6182bd6a93ca3e31b8517d46 624 PRINTS PR00775 90kDa heat shock protein signature 95 112 2.1E-64 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal YE3090 e70c011c6182bd6a93ca3e31b8517d46 624 PRINTS PR00775 90kDa heat shock protein signature 192 210 2.1E-64 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal YE3090 e70c011c6182bd6a93ca3e31b8517d46 624 PRINTS PR00775 90kDa heat shock protein signature 174 191 2.1E-64 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal YE3090 e70c011c6182bd6a93ca3e31b8517d46 624 PRINTS PR00775 90kDa heat shock protein signature 77 94 2.1E-64 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal YE3090 e70c011c6182bd6a93ca3e31b8517d46 624 PRINTS PR00775 90kDa heat shock protein signature 7 27 2.1E-64 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal YE3090 e70c011c6182bd6a93ca3e31b8517d46 624 PIRSF PIRSF002583 1 624 7.6E-218 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 YE3090 e70c011c6182bd6a93ca3e31b8517d46 624 PANTHER PTHR11528 7 623 0.0 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 YE3090 e70c011c6182bd6a93ca3e31b8517d46 624 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 29 184 1.5E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE3090 e70c011c6182bd6a93ca3e31b8517d46 624 SMART SM00387 29 186 1.1E-9 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE2481 ae395a85f958891aa11eee59c71e97f4 155 Pfam PF13994 PgaD-like protein 5 134 7.4E-32 T 22-04-2016 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0042710 YE2481 ae395a85f958891aa11eee59c71e97f4 155 TIGRFAM TIGR03940 PGA_PgaD: poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD 5 138 9.7E-34 T 22-04-2016 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0042710 YE2481 ae395a85f958891aa11eee59c71e97f4 155 ProDom PD460230 MEMBRANE STORAGE INNER HAEMIN SYSTEM HMSS PGA BIOFILM PGAD TRANSMEMBRANE 1 137 5.0E-49 T 22-04-2016 YE4060 298c10f9c2960f68808601db47bcd6b8 329 PANTHER PTHR30213 12 321 8.2E-90 T 22-04-2016 YE4060 298c10f9c2960f68808601db47bcd6b8 329 PANTHER PTHR30213:SF1 12 321 8.2E-90 T 22-04-2016 YE4060 298c10f9c2960f68808601db47bcd6b8 329 TIGRFAM TIGR00766 TIGR00766: inner membrane protein YhjD 40 313 8.7E-122 T 22-04-2016 IPR005274 Inner membrane protein YhjD YE4060 298c10f9c2960f68808601db47bcd6b8 329 PIRSF PIRSF035875 24 323 2.8E-22 T 22-04-2016 IPR017039 Virulence factor BrkB YE4060 298c10f9c2960f68808601db47bcd6b8 329 Pfam PF03631 Virulence factor BrkB 54 312 4.5E-46 T 22-04-2016 IPR017039 Virulence factor BrkB YE3987 582ea74dab6c435dcfadf7b2fe25d163 252 SUPERFAMILY SSF46785 3 73 1.62E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3987 582ea74dab6c435dcfadf7b2fe25d163 252 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 1.0E-24 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YE3987 582ea74dab6c435dcfadf7b2fe25d163 252 PANTHER PTHR30363 1 252 1.1E-127 T 22-04-2016 YE3987 582ea74dab6c435dcfadf7b2fe25d163 252 Gene3D G3DSA:3.30.750.70 74 153 1.1E-18 T 22-04-2016 YE3987 582ea74dab6c435dcfadf7b2fe25d163 252 Pfam PF00455 DeoR C terminal sensor domain 76 232 9.7E-54 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain YE3987 582ea74dab6c435dcfadf7b2fe25d163 252 SMART SM00420 6 58 5.2E-27 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YE3987 582ea74dab6c435dcfadf7b2fe25d163 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 5.7E-12 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YE3987 582ea74dab6c435dcfadf7b2fe25d163 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 5.7E-12 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YE3987 582ea74dab6c435dcfadf7b2fe25d163 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 YE3987 582ea74dab6c435dcfadf7b2fe25d163 252 Gene3D G3DSA:1.10.10.10 2 58 2.1E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3987 582ea74dab6c435dcfadf7b2fe25d163 252 SMART SM01134 72 233 2.1E-71 T 22-04-2016 YE3987 582ea74dab6c435dcfadf7b2fe25d163 252 PANTHER PTHR30363:SF1 1 252 1.1E-127 T 22-04-2016 YE3987 582ea74dab6c435dcfadf7b2fe25d163 252 SUPERFAMILY SSF100950 74 234 1.07E-29 T 22-04-2016 YE0405 8c89ee07acc7316ca24ae315fe293d32 566 PANTHER PTHR12815:SF12 1 566 1.6E-286 T 22-04-2016 YE0405 8c89ee07acc7316ca24ae315fe293d32 566 Pfam PF01103 Surface antigen 341 563 3.2E-29 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 YE0405 8c89ee07acc7316ca24ae315fe293d32 566 Gene3D G3DSA:2.40.160.50 288 563 1.5E-23 T 22-04-2016 YE0405 8c89ee07acc7316ca24ae315fe293d32 566 PANTHER PTHR12815 1 566 1.6E-286 T 22-04-2016 YE0405 8c89ee07acc7316ca24ae315fe293d32 566 Pfam PF07244 Surface antigen variable number repeat 178 241 6.8E-7 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 YE1617 615bff7b041ef8fe8edf9ecb863e5b34 1027 PANTHER PTHR11615:SF136 75 105 8.6E-192 T 22-04-2016 YE1617 615bff7b041ef8fe8edf9ecb863e5b34 1027 PANTHER PTHR11615:SF136 553 760 8.6E-192 T 22-04-2016 YE1617 615bff7b041ef8fe8edf9ecb863e5b34 1027 PANTHER PTHR11615:SF136 125 368 8.6E-192 T 22-04-2016 YE1617 615bff7b041ef8fe8edf9ecb863e5b34 1027 PANTHER PTHR11615:SF136 413 489 8.6E-192 T 22-04-2016 YE1617 615bff7b041ef8fe8edf9ecb863e5b34 1027 PANTHER PTHR11615:SF136 798 1026 8.6E-192 T 22-04-2016 YE1617 615bff7b041ef8fe8edf9ecb863e5b34 1027 Pfam PF01568 Molydopterin dinucleotide binding domain 895 999 4.3E-16 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 YE1617 615bff7b041ef8fe8edf9ecb863e5b34 1027 SUPERFAMILY SSF53706 137 895 1.93E-112 T 22-04-2016 YE1617 615bff7b041ef8fe8edf9ecb863e5b34 1027 SUPERFAMILY SSF53706 74 110 1.93E-112 T 22-04-2016 YE1617 615bff7b041ef8fe8edf9ecb863e5b34 1027 Gene3D G3DSA:2.40.40.20 854 1000 6.9E-28 T 22-04-2016 YE1617 615bff7b041ef8fe8edf9ecb863e5b34 1027 Gene3D G3DSA:3.40.50.740 614 683 3.8E-30 T 22-04-2016 YE1617 615bff7b041ef8fe8edf9ecb863e5b34 1027 Gene3D G3DSA:3.40.50.740 715 735 3.8E-30 T 22-04-2016 YE1617 615bff7b041ef8fe8edf9ecb863e5b34 1027 Gene3D G3DSA:3.40.50.740 158 260 3.8E-30 T 22-04-2016 YE1617 615bff7b041ef8fe8edf9ecb863e5b34 1027 Gene3D G3DSA:2.20.25.90 74 157 2.4E-11 T 22-04-2016 YE1617 615bff7b041ef8fe8edf9ecb863e5b34 1027 SUPERFAMILY SSF50692 877 1003 1.76E-28 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain YE1617 615bff7b041ef8fe8edf9ecb863e5b34 1027 PANTHER PTHR11615 75 105 8.6E-192 T 22-04-2016 YE1617 615bff7b041ef8fe8edf9ecb863e5b34 1027 PANTHER PTHR11615 553 760 8.6E-192 T 22-04-2016 YE1617 615bff7b041ef8fe8edf9ecb863e5b34 1027 PANTHER PTHR11615 125 368 8.6E-192 T 22-04-2016 YE1617 615bff7b041ef8fe8edf9ecb863e5b34 1027 PANTHER PTHR11615 413 489 8.6E-192 T 22-04-2016 YE1617 615bff7b041ef8fe8edf9ecb863e5b34 1027 PANTHER PTHR11615 798 1026 8.6E-192 T 22-04-2016 YE1617 615bff7b041ef8fe8edf9ecb863e5b34 1027 SMART SM00926 71 153 5.4E-14 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 YE1617 615bff7b041ef8fe8edf9ecb863e5b34 1027 Pfam PF00384 Molybdopterin oxidoreductase 243 689 7.4E-14 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 YE1617 615bff7b041ef8fe8edf9ecb863e5b34 1027 Gene3D G3DSA:3.40.228.10 261 375 7.6E-40 T 22-04-2016 YE1617 615bff7b041ef8fe8edf9ecb863e5b34 1027 Gene3D G3DSA:3.40.228.10 463 549 7.6E-40 T 22-04-2016 YE0386 69915093ebab8db8fc85e93d845b32c3 547 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 293 445 1.7E-29 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 YE0386 69915093ebab8db8fc85e93d845b32c3 547 PANTHER PTHR10909:SF289 1 467 1.2E-228 T 22-04-2016 YE0386 69915093ebab8db8fc85e93d845b32c3 547 PANTHER PTHR10909 1 467 1.2E-228 T 22-04-2016 YE0386 69915093ebab8db8fc85e93d845b32c3 547 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 187 199 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 YE0386 69915093ebab8db8fc85e93d845b32c3 547 SUPERFAMILY SSF56645 81 300 4.23E-30 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 YE0386 69915093ebab8db8fc85e93d845b32c3 547 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 185 283 2.7E-13 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 YE0386 69915093ebab8db8fc85e93d845b32c3 547 Gene3D G3DSA:2.40.110.10 185 284 5.0E-19 T 22-04-2016 YE0386 69915093ebab8db8fc85e93d845b32c3 547 SUPERFAMILY SSF47203 299 450 1.08E-37 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 YE0386 69915093ebab8db8fc85e93d845b32c3 547 Gene3D G3DSA:1.20.140.10 285 452 1.6E-37 T 22-04-2016 YE3827 6b514c0987ec6bb1330dbfe0c2037299 470 PANTHER PTHR10283 1 470 1.0E-181 T 22-04-2016 YE3827 6b514c0987ec6bb1330dbfe0c2037299 470 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 25 464 8.7E-115 T 22-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 YE3827 6b514c0987ec6bb1330dbfe0c2037299 470 PIRSF PIRSF002457 2 470 5.7E-135 T 22-04-2016 IPR030676 Citrate carrier CitT-related YE3827 6b514c0987ec6bb1330dbfe0c2037299 470 Pfam PF00939 Sodium:sulfate symporter transmembrane region 7 470 5.7E-144 T 22-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 YE3827 6b514c0987ec6bb1330dbfe0c2037299 470 PANTHER PTHR10283:SF13 1 470 1.0E-181 T 22-04-2016 IPR030676 Citrate carrier CitT-related YE1059 39070d87428fcc05be3fa083a5e2ee1b 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 7.0E-37 T 22-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 YE1059 39070d87428fcc05be3fa083a5e2ee1b 107 PANTHER PTHR10072 3 107 1.7E-50 T 22-04-2016 YE1059 39070d87428fcc05be3fa083a5e2ee1b 107 Hamap MF_01429 Iron-binding protein IscA [iscA]. 1 107 38.858 T 22-04-2016 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0016226|GO:0051536 YE1059 39070d87428fcc05be3fa083a5e2ee1b 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 22-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site YE1059 39070d87428fcc05be3fa083a5e2ee1b 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 5.6E-58 T 22-04-2016 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0016226|GO:0051536 YE1059 39070d87428fcc05be3fa083a5e2ee1b 107 Gene3D G3DSA:2.60.300.12 2 96 1.5E-34 T 22-04-2016 IPR000361 FeS cluster biogenesis YE1059 39070d87428fcc05be3fa083a5e2ee1b 107 SUPERFAMILY SSF89360 1 95 3.66E-33 T 22-04-2016 IPR000361 FeS cluster biogenesis YE1059 39070d87428fcc05be3fa083a5e2ee1b 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 2.0E-25 T 22-04-2016 IPR000361 FeS cluster biogenesis YE1409 0f55e340d341c716949ffcd804f69ca2 240 Pfam PF01381 Helix-turn-helix 25 73 3.8E-9 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YE1409 0f55e340d341c716949ffcd804f69ca2 240 Gene3D G3DSA:2.10.109.10 145 235 3.8E-31 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain YE1409 0f55e340d341c716949ffcd804f69ca2 240 SUPERFAMILY SSF51306 109 233 4.53E-27 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C YE1409 0f55e340d341c716949ffcd804f69ca2 240 SMART SM00530 16 75 5.1E-8 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YE1409 0f55e340d341c716949ffcd804f69ca2 240 PANTHER PTHR33516 2 232 3.9E-120 T 22-04-2016 YE1409 0f55e340d341c716949ffcd804f69ca2 240 Gene3D G3DSA:1.10.260.40 5 83 6.1E-32 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE1409 0f55e340d341c716949ffcd804f69ca2 240 SUPERFAMILY SSF47413 1 92 2.95E-21 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE1409 0f55e340d341c716949ffcd804f69ca2 240 Pfam PF00717 Peptidase S24-like 152 223 5.3E-15 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B YE1409 0f55e340d341c716949ffcd804f69ca2 240 PANTHER PTHR33516:SF3 2 232 3.9E-120 T 22-04-2016 YE0769 02e67a64c86f981a801582d45e283f03 214 SUPERFAMILY SSF53448 1 208 2.14E-50 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YE0769 02e67a64c86f981a801582d45e283f03 214 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 82 89 - T 22-04-2016 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 YE0769 02e67a64c86f981a801582d45e283f03 214 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 2 210 24.355 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 YE0769 02e67a64c86f981a801582d45e283f03 214 Gene3D G3DSA:3.90.550.10 1 211 7.3E-64 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YE0769 02e67a64c86f981a801582d45e283f03 214 PANTHER PTHR32125 1 211 2.1E-75 T 22-04-2016 YE0769 02e67a64c86f981a801582d45e283f03 214 PANTHER PTHR32125:SF4 1 211 2.1E-75 T 22-04-2016 YE0769 02e67a64c86f981a801582d45e283f03 214 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 1 209 1.5E-76 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 YE0769 02e67a64c86f981a801582d45e283f03 214 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 1 207 1.0E-67 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 YE4010 ba3f8702be10a2708db770f64d17fbe7 476 Hamap MF_00484 Glycogen synthase [glgA]. 1 476 46.049 T 22-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 YE4010 ba3f8702be10a2708db770f64d17fbe7 476 PANTHER PTHR12526:SF17 1 476 2.7E-152 T 22-04-2016 YE4010 ba3f8702be10a2708db770f64d17fbe7 476 Pfam PF00534 Glycosyl transferases group 1 289 448 5.2E-16 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 YE4010 ba3f8702be10a2708db770f64d17fbe7 476 Pfam PF08323 Starch synthase catalytic domain 2 234 9.4E-71 T 22-04-2016 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 YE4010 ba3f8702be10a2708db770f64d17fbe7 476 PANTHER PTHR12526 1 476 2.7E-152 T 22-04-2016 YE4010 ba3f8702be10a2708db770f64d17fbe7 476 Gene3D G3DSA:3.40.50.2000 250 456 1.6E-71 T 22-04-2016 YE4010 ba3f8702be10a2708db770f64d17fbe7 476 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 1 476 3.4E-169 T 22-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 YE4010 ba3f8702be10a2708db770f64d17fbe7 476 SUPERFAMILY SSF53756 3 476 6.63E-116 T 22-04-2016 YE3579 06e0a74d2d1d65dff973f1aa256d5b7b 785 SMART SM00062 43 263 8.1E-5 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YE3579 06e0a74d2d1d65dff973f1aa256d5b7b 785 PANTHER PTHR24423 313 543 9.4E-71 T 22-04-2016 YE3579 06e0a74d2d1d65dff973f1aa256d5b7b 785 PANTHER PTHR24423 579 783 9.4E-71 T 22-04-2016 YE3579 06e0a74d2d1d65dff973f1aa256d5b7b 785 SMART SM00388 308 373 9.8E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE3579 06e0a74d2d1d65dff973f1aa256d5b7b 785 Pfam PF00072 Response regulator receiver domain 665 777 2.0E-17 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE3579 06e0a74d2d1d65dff973f1aa256d5b7b 785 SUPERFAMILY SSF53850 38 260 2.17E-27 T 22-04-2016 YE3579 06e0a74d2d1d65dff973f1aa256d5b7b 785 PRINTS PR00344 Bacterial sensor protein C-terminal signature 524 537 7.2E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE3579 06e0a74d2d1d65dff973f1aa256d5b7b 785 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 475 7.2E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE3579 06e0a74d2d1d65dff973f1aa256d5b7b 785 PRINTS PR00344 Bacterial sensor protein C-terminal signature 500 518 7.2E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE3579 06e0a74d2d1d65dff973f1aa256d5b7b 785 Gene3D G3DSA:3.40.190.10 223 263 3.6E-8 T 22-04-2016 YE3579 06e0a74d2d1d65dff973f1aa256d5b7b 785 Gene3D G3DSA:3.40.190.10 41 129 3.6E-8 T 22-04-2016 YE3579 06e0a74d2d1d65dff973f1aa256d5b7b 785 SUPERFAMILY SSF47384 313 373 3.53E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE3579 06e0a74d2d1d65dff973f1aa256d5b7b 785 Gene3D G3DSA:3.30.565.10 377 538 1.1E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE3579 06e0a74d2d1d65dff973f1aa256d5b7b 785 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 425 537 1.1E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE3579 06e0a74d2d1d65dff973f1aa256d5b7b 785 Gene3D G3DSA:3.40.190.10 132 216 4.8E-4 T 22-04-2016 YE3579 06e0a74d2d1d65dff973f1aa256d5b7b 785 Gene3D G3DSA:3.40.50.2300 661 782 5.1E-24 T 22-04-2016 YE3579 06e0a74d2d1d65dff973f1aa256d5b7b 785 SMART SM00387 421 540 2.5E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE3579 06e0a74d2d1d65dff973f1aa256d5b7b 785 SMART SM00448 662 777 7.6E-17 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE3579 06e0a74d2d1d65dff973f1aa256d5b7b 785 SUPERFAMILY SSF55874 365 539 3.36E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE3579 06e0a74d2d1d65dff973f1aa256d5b7b 785 Gene3D G3DSA:1.10.287.130 313 354 2.4E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE3579 06e0a74d2d1d65dff973f1aa256d5b7b 785 SUPERFAMILY SSF52172 661 781 1.85E-23 T 22-04-2016 IPR011006 CheY-like superfamily YE3579 06e0a74d2d1d65dff973f1aa256d5b7b 785 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 260 3.0E-16 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YE3976 83b1361938281787ac3193513bebbdcd 376 PANTHER PTHR30332 5 375 4.7E-95 T 22-04-2016 YE3976 83b1361938281787ac3193513bebbdcd 376 PRINTS PR00811 Bacterial general secretion pathway protein D signature 211 235 5.3E-14 T 22-04-2016 IPR001775 GspD/PilQ family YE3976 83b1361938281787ac3193513bebbdcd 376 PRINTS PR00811 Bacterial general secretion pathway protein D signature 339 357 5.3E-14 T 22-04-2016 IPR001775 GspD/PilQ family YE3976 83b1361938281787ac3193513bebbdcd 376 PRINTS PR00811 Bacterial general secretion pathway protein D signature 362 376 5.3E-14 T 22-04-2016 IPR001775 GspD/PilQ family YE3976 83b1361938281787ac3193513bebbdcd 376 PANTHER PTHR30332:SF8 5 375 4.7E-95 T 22-04-2016 YE3976 83b1361938281787ac3193513bebbdcd 376 Pfam PF03958 Bacterial type II/III secretion system short domain 84 145 5.0E-11 T 22-04-2016 IPR005644 NolW-like YE3976 83b1361938281787ac3193513bebbdcd 376 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 320 353 - T 22-04-2016 IPR004845 Type II secretion system GspD, conserved site GO:0008565 YE3976 83b1361938281787ac3193513bebbdcd 376 PRINTS PR01032 Gene IV protein signature 236 259 1.5E-9 T 22-04-2016 YE3976 83b1361938281787ac3193513bebbdcd 376 PRINTS PR01032 Gene IV protein signature 355 376 1.5E-9 T 22-04-2016 YE3976 83b1361938281787ac3193513bebbdcd 376 PRINTS PR01032 Gene IV protein signature 195 218 1.5E-9 T 22-04-2016 YE3976 83b1361938281787ac3193513bebbdcd 376 PRINTS PR01032 Gene IV protein signature 302 330 1.5E-9 T 22-04-2016 YE3976 83b1361938281787ac3193513bebbdcd 376 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 2 374 6.4E-118 T 22-04-2016 IPR013355 Type IV pilus secretin PilQ GO:0009297|GO:0009306 YE3976 83b1361938281787ac3193513bebbdcd 376 Pfam PF00263 Bacterial type II and III secretion system protein 215 374 1.5E-47 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 YE0483 52816eb6a52f98a35edd11ec3e8d4941 302 Gene3D G3DSA:3.40.190.10 96 180 5.9E-25 T 22-04-2016 YE0483 52816eb6a52f98a35edd11ec3e8d4941 302 PANTHER PTHR30537:SF5 11 298 3.1E-94 T 22-04-2016 YE0483 52816eb6a52f98a35edd11ec3e8d4941 302 Pfam PF03466 LysR substrate binding domain 92 297 3.9E-46 T 22-04-2016 IPR005119 LysR, substrate-binding YE0483 52816eb6a52f98a35edd11ec3e8d4941 302 SUPERFAMILY SSF53850 93 300 8.53E-46 T 22-04-2016 YE0483 52816eb6a52f98a35edd11ec3e8d4941 302 PANTHER PTHR30537 11 298 3.1E-94 T 22-04-2016 YE0483 52816eb6a52f98a35edd11ec3e8d4941 302 Gene3D G3DSA:3.40.190.10 181 266 1.4E-6 T 22-04-2016 YE0483 52816eb6a52f98a35edd11ec3e8d4941 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 8.3E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE0483 52816eb6a52f98a35edd11ec3e8d4941 302 Gene3D G3DSA:1.10.10.10 9 89 6.3E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0483 52816eb6a52f98a35edd11ec3e8d4941 302 SUPERFAMILY SSF46785 9 116 1.61E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0138 062a20eeb2326bcf9195c4ead7faa3d6 367 Gene3D G3DSA:3.40.50.150 156 364 8.4E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE0138 062a20eeb2326bcf9195c4ead7faa3d6 367 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 11 366 1.5E-188 T 22-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 YE0138 062a20eeb2326bcf9195c4ead7faa3d6 367 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 299 328 - T 22-04-2016 IPR030390 RNA methyltransferase TrmA, active site YE0138 062a20eeb2326bcf9195c4ead7faa3d6 367 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 11 366 5.1E-189 T 22-04-2016 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 YE0138 062a20eeb2326bcf9195c4ead7faa3d6 367 PANTHER PTHR11061 6 367 1.3E-236 T 22-04-2016 YE0138 062a20eeb2326bcf9195c4ead7faa3d6 367 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 348 358 - T 22-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site YE0138 062a20eeb2326bcf9195c4ead7faa3d6 367 SUPERFAMILY SSF53335 9 365 3.89E-52 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE0138 062a20eeb2326bcf9195c4ead7faa3d6 367 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 366 42.911 T 22-04-2016 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 YE0138 062a20eeb2326bcf9195c4ead7faa3d6 367 PANTHER PTHR11061:SF25 6 367 1.3E-236 T 22-04-2016 YE1195 ce5ec7e12b04492bb71c5615207590f4 278 Gene3D G3DSA:1.10.3720.10 20 274 1.6E-52 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE1195 ce5ec7e12b04492bb71c5615207590f4 278 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 6 270 5.1E-110 T 22-04-2016 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 YE1195 ce5ec7e12b04492bb71c5615207590f4 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 275 8.8E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE1195 ce5ec7e12b04492bb71c5615207590f4 278 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 9 272 1.5E-113 T 22-04-2016 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 YE1195 ce5ec7e12b04492bb71c5615207590f4 278 PANTHER PTHR30406:SF7 7 278 3.6E-206 T 22-04-2016 YE1195 ce5ec7e12b04492bb71c5615207590f4 278 SUPERFAMILY SSF161098 17 266 5.1E-57 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE1195 ce5ec7e12b04492bb71c5615207590f4 278 PANTHER PTHR30406 7 278 3.6E-206 T 22-04-2016 YE3084 cc75572f53332dd6fe3c69a85212a414 292 Gene3D G3DSA:3.90.25.10 175 289 1.4E-11 T 22-04-2016 YE3084 cc75572f53332dd6fe3c69a85212a414 292 SUPERFAMILY SSF51735 1 288 5.1E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3084 cc75572f53332dd6fe3c69a85212a414 292 PANTHER PTHR10366:SF466 2 289 2.0E-42 T 22-04-2016 YE3084 cc75572f53332dd6fe3c69a85212a414 292 PANTHER PTHR10366 2 289 2.0E-42 T 22-04-2016 YE3084 cc75572f53332dd6fe3c69a85212a414 292 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 219 1.8E-35 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 YE3084 cc75572f53332dd6fe3c69a85212a414 292 Gene3D G3DSA:3.40.50.720 1 174 7.3E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain YE4009 ad0a18316e8a895e2892aa6f06c10a99 815 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 14 810 0.0 T 22-04-2016 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 YE4009 ad0a18316e8a895e2892aa6f06c10a99 815 PIRSF PIRSF000460 2 815 2.5E-231 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 YE4009 ad0a18316e8a895e2892aa6f06c10a99 815 SUPERFAMILY SSF53756 12 814 0.0 T 22-04-2016 YE4009 ad0a18316e8a895e2892aa6f06c10a99 815 PANTHER PTHR11468 13 815 0.0 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 YE4009 ad0a18316e8a895e2892aa6f06c10a99 815 Gene3D G3DSA:3.40.50.2000 13 479 8.0E-206 T 22-04-2016 YE4009 ad0a18316e8a895e2892aa6f06c10a99 815 Pfam PF00343 Carbohydrate phosphorylase 102 810 0.0 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 YE4009 ad0a18316e8a895e2892aa6f06c10a99 815 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 654 666 - T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 YE4009 ad0a18316e8a895e2892aa6f06c10a99 815 Gene3D G3DSA:3.40.50.2000 480 795 3.4E-140 T 22-04-2016 YE4009 ad0a18316e8a895e2892aa6f06c10a99 815 PANTHER PTHR11468:SF3 13 815 0.0 T 22-04-2016 YE2694 01143b75dedef259fcb2831becd91b30 265 PRINTS PR00969 Pili chaperone signature 40 49 3.1E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YE2694 01143b75dedef259fcb2831becd91b30 265 PRINTS PR00969 Pili chaperone signature 89 110 3.1E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YE2694 01143b75dedef259fcb2831becd91b30 265 PRINTS PR00969 Pili chaperone signature 183 198 3.1E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YE2694 01143b75dedef259fcb2831becd91b30 265 PRINTS PR00969 Pili chaperone signature 117 134 3.1E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YE2694 01143b75dedef259fcb2831becd91b30 265 PRINTS PR00969 Pili chaperone signature 143 158 3.1E-33 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YE2694 01143b75dedef259fcb2831becd91b30 265 PANTHER PTHR30251:SF2 8 258 2.0E-81 T 22-04-2016 YE2694 01143b75dedef259fcb2831becd91b30 265 Gene3D G3DSA:2.60.40.1070 166 249 1.6E-18 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YE2694 01143b75dedef259fcb2831becd91b30 265 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 40 161 5.6E-43 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 YE2694 01143b75dedef259fcb2831becd91b30 265 SUPERFAMILY SSF49584 155 251 4.06E-17 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YE2694 01143b75dedef259fcb2831becd91b30 265 PANTHER PTHR30251 8 258 2.0E-81 T 22-04-2016 YE2694 01143b75dedef259fcb2831becd91b30 265 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 188 248 7.8E-16 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YE2694 01143b75dedef259fcb2831becd91b30 265 SUPERFAMILY SSF49354 36 161 1.81E-41 T 22-04-2016 IPR008962 PapD-like YE2694 01143b75dedef259fcb2831becd91b30 265 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 116 133 - T 22-04-2016 IPR018046 Pili assembly chaperone, conserved site YE2694 01143b75dedef259fcb2831becd91b30 265 Gene3D G3DSA:2.60.40.360 40 161 3.1E-45 T 22-04-2016 IPR008962 PapD-like YE4027 ba54efbdf4ed94ccce93a26ce6d330cb 646 Gene3D G3DSA:3.40.50.970 414 618 2.5E-56 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE4027 ba54efbdf4ed94ccce93a26ce6d330cb 646 PANTHER PTHR18968 3 646 0.0 T 22-04-2016 YE4027 ba54efbdf4ed94ccce93a26ce6d330cb 646 TIGRFAM TIGR04377 myo_inos_iolD: 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase 5 644 2.1E-289 T 22-04-2016 IPR030817 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase GO:0016823|GO:0019310|GO:0030976 KEGG: 00562+3.7.1.22|UniPathway: UPA00076 YE4027 ba54efbdf4ed94ccce93a26ce6d330cb 646 SUPERFAMILY SSF52518 419 631 1.18E-52 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE4027 ba54efbdf4ed94ccce93a26ce6d330cb 646 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 220 353 3.6E-30 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 YE4027 ba54efbdf4ed94ccce93a26ce6d330cb 646 Gene3D G3DSA:3.40.50.1220 212 363 2.2E-37 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain YE4027 ba54efbdf4ed94ccce93a26ce6d330cb 646 PANTHER PTHR18968:SF9 3 646 0.0 T 22-04-2016 IPR030817 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase GO:0016823|GO:0019310|GO:0030976 KEGG: 00562+3.7.1.22|UniPathway: UPA00076 YE4027 ba54efbdf4ed94ccce93a26ce6d330cb 646 SUPERFAMILY SSF52467 185 371 1.23E-39 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain YE4027 ba54efbdf4ed94ccce93a26ce6d330cb 646 Gene3D G3DSA:3.40.50.970 2 211 3.4E-56 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE4027 ba54efbdf4ed94ccce93a26ce6d330cb 646 SUPERFAMILY SSF52518 2 208 7.23E-32 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE4027 ba54efbdf4ed94ccce93a26ce6d330cb 646 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 442 601 2.2E-39 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 YE4027 ba54efbdf4ed94ccce93a26ce6d330cb 646 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 7 196 2.7E-32 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 YE4027 ba54efbdf4ed94ccce93a26ce6d330cb 646 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 478 497 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 YE3604 fc381f9d58db9066313a480c03e04e43 172 ProDom PD008308 HUPJ HYDROGENASE EXPRESSION/FORMATION HYDROGENASE-2 HYBE COMPONENT OPERON ELECTRON METAL-BINDING IRON 16 147 1.0E-40 T 22-04-2016 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE YE3604 fc381f9d58db9066313a480c03e04e43 172 Pfam PF11939 Protein of unknown function (DUF3457) 12 162 6.5E-44 T 22-04-2016 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE YE3604 fc381f9d58db9066313a480c03e04e43 172 TIGRFAM TIGR03993 hydrog_HybE: [NiFe] hydrogenase assembly chaperone, HybE family 16 162 1.9E-52 T 22-04-2016 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE YE3745 e8ebce3d5c8a9e6b75f389e23d4e735b 362 SMART SM00228 256 338 3.5E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YE3745 e8ebce3d5c8a9e6b75f389e23d4e735b 362 PANTHER PTHR22939 9 351 2.0E-169 T 22-04-2016 YE3745 e8ebce3d5c8a9e6b75f389e23d4e735b 362 Gene3D G3DSA:2.40.10.10 146 258 9.5E-39 T 22-04-2016 YE3745 e8ebce3d5c8a9e6b75f389e23d4e735b 362 Gene3D G3DSA:2.30.42.10 259 356 6.8E-24 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YE3745 e8ebce3d5c8a9e6b75f389e23d4e735b 362 Gene3D G3DSA:2.40.10.10 43 143 2.3E-30 T 22-04-2016 YE3745 e8ebce3d5c8a9e6b75f389e23d4e735b 362 SUPERFAMILY SSF50494 45 253 2.08E-58 T 22-04-2016 IPR009003 Peptidase S1, PA clan YE3745 e8ebce3d5c8a9e6b75f389e23d4e735b 362 Pfam PF13180 PDZ domain 278 346 1.5E-12 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YE3745 e8ebce3d5c8a9e6b75f389e23d4e735b 362 PRINTS PR00834 HtrA/DegQ protease family signature 110 130 2.6E-46 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YE3745 e8ebce3d5c8a9e6b75f389e23d4e735b 362 PRINTS PR00834 HtrA/DegQ protease family signature 150 174 2.6E-46 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YE3745 e8ebce3d5c8a9e6b75f389e23d4e735b 362 PRINTS PR00834 HtrA/DegQ protease family signature 296 308 2.6E-46 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YE3745 e8ebce3d5c8a9e6b75f389e23d4e735b 362 PRINTS PR00834 HtrA/DegQ protease family signature 185 202 2.6E-46 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YE3745 e8ebce3d5c8a9e6b75f389e23d4e735b 362 PRINTS PR00834 HtrA/DegQ protease family signature 207 224 2.6E-46 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YE3745 e8ebce3d5c8a9e6b75f389e23d4e735b 362 PRINTS PR00834 HtrA/DegQ protease family signature 89 101 2.6E-46 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YE3745 e8ebce3d5c8a9e6b75f389e23d4e735b 362 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 2 349 3.8E-155 T 22-04-2016 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 YE3745 e8ebce3d5c8a9e6b75f389e23d4e735b 362 SUPERFAMILY SSF50156 239 346 3.15E-20 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YE3745 e8ebce3d5c8a9e6b75f389e23d4e735b 362 PANTHER PTHR22939:SF93 9 351 2.0E-169 T 22-04-2016 YE3745 e8ebce3d5c8a9e6b75f389e23d4e735b 362 Pfam PF13365 Trypsin-like peptidase domain 80 214 2.6E-26 T 22-04-2016 YE3771 e6ad38f90cef7d2c58320d853797c023 273 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 3 79 4.6E-22 T 22-04-2016 IPR013589 Bacterial transglutaminase-like, N-terminal YE3771 e6ad38f90cef7d2c58320d853797c023 273 SUPERFAMILY SSF54001 50 257 4.8E-41 T 22-04-2016 YE3771 e6ad38f90cef7d2c58320d853797c023 273 PANTHER PTHR33490 1 273 6.1E-81 T 22-04-2016 YE3771 e6ad38f90cef7d2c58320d853797c023 273 Pfam PF01841 Transglutaminase-like superfamily 125 217 7.4E-23 T 22-04-2016 IPR002931 Transglutaminase-like YE3771 e6ad38f90cef7d2c58320d853797c023 273 SMART SM00460 158 220 8.2E-19 T 22-04-2016 IPR002931 Transglutaminase-like YE3771 e6ad38f90cef7d2c58320d853797c023 273 PANTHER PTHR33490:SF5 1 273 6.1E-81 T 22-04-2016 YE3771 e6ad38f90cef7d2c58320d853797c023 273 Gene3D G3DSA:3.90.260.10 145 251 6.1E-14 T 22-04-2016 IPR002931 Transglutaminase-like YE1431 7ec2b0261008d3198d0505507383540c 520 Gene3D G3DSA:3.20.20.450 270 517 3.2E-72 T 22-04-2016 IPR001633 EAL domain YE1431 7ec2b0261008d3198d0505507383540c 520 Pfam PF00563 EAL domain 272 505 1.4E-61 T 22-04-2016 IPR001633 EAL domain YE1431 7ec2b0261008d3198d0505507383540c 520 SUPERFAMILY SSF141868 271 517 1.07E-71 T 22-04-2016 IPR001633 EAL domain YE1431 7ec2b0261008d3198d0505507383540c 520 SMART SM00052 265 510 7.6E-81 T 22-04-2016 IPR001633 EAL domain YE1431 7ec2b0261008d3198d0505507383540c 520 PANTHER PTHR33121 180 517 4.0E-121 T 22-04-2016 YE1431 7ec2b0261008d3198d0505507383540c 520 Pfam PF12792 CSS motif domain associated with EAL 46 243 8.2E-35 T 22-04-2016 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain YE1431 7ec2b0261008d3198d0505507383540c 520 PANTHER PTHR33121:SF1 180 517 4.0E-121 T 22-04-2016 YE1453 0fd76b06d1a05b50d18a78948aa5f2e0 267 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 44 174 2.6E-31 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 YE1453 0fd76b06d1a05b50d18a78948aa5f2e0 267 PRINTS PR00969 Pili chaperone signature 89 110 6.3E-30 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YE1453 0fd76b06d1a05b50d18a78948aa5f2e0 267 PRINTS PR00969 Pili chaperone signature 156 171 6.3E-30 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YE1453 0fd76b06d1a05b50d18a78948aa5f2e0 267 PRINTS PR00969 Pili chaperone signature 117 134 6.3E-30 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YE1453 0fd76b06d1a05b50d18a78948aa5f2e0 267 PRINTS PR00969 Pili chaperone signature 191 206 6.3E-30 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YE1453 0fd76b06d1a05b50d18a78948aa5f2e0 267 PRINTS PR00969 Pili chaperone signature 44 53 6.3E-30 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YE1453 0fd76b06d1a05b50d18a78948aa5f2e0 267 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 196 260 1.4E-16 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YE1453 0fd76b06d1a05b50d18a78948aa5f2e0 267 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 116 133 - T 22-04-2016 IPR018046 Pili assembly chaperone, conserved site YE1453 0fd76b06d1a05b50d18a78948aa5f2e0 267 Gene3D G3DSA:2.60.40.360 44 174 2.9E-32 T 22-04-2016 IPR008962 PapD-like YE1453 0fd76b06d1a05b50d18a78948aa5f2e0 267 SUPERFAMILY SSF49584 169 265 4.06E-20 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YE1453 0fd76b06d1a05b50d18a78948aa5f2e0 267 SUPERFAMILY SSF49354 40 174 5.23E-33 T 22-04-2016 IPR008962 PapD-like YE1453 0fd76b06d1a05b50d18a78948aa5f2e0 267 PANTHER PTHR30251:SF9 14 267 9.1E-105 T 22-04-2016 YE1453 0fd76b06d1a05b50d18a78948aa5f2e0 267 PANTHER PTHR30251 14 267 9.1E-105 T 22-04-2016 YE1453 0fd76b06d1a05b50d18a78948aa5f2e0 267 Gene3D G3DSA:2.60.40.1070 177 264 5.9E-27 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YE2901 55695bc754e9fdfe01c20a2ddd7471e0 82 Pfam PF09905 Uncharacterized conserved protein (DUF2132) 7 68 1.2E-35 T 22-04-2016 IPR018668 DNA-binding protein VF530-like, bacteria GO:0003677 YE2901 55695bc754e9fdfe01c20a2ddd7471e0 82 Gene3D G3DSA:1.10.720.30 14 71 2.0E-33 T 22-04-2016 IPR003034 SAP domain YE1007 41b856a91274dd5b8a54fd5b9db1a093 441 SMART SM00487 23 225 4.7E-58 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain YE1007 41b856a91274dd5b8a54fd5b9db1a093 441 Pfam PF00270 DEAD/DEAH box helicase 28 196 7.8E-47 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YE1007 41b856a91274dd5b8a54fd5b9db1a093 441 Pfam PF00271 Helicase conserved C-terminal domain 236 343 2.8E-25 T 22-04-2016 IPR001650 Helicase, C-terminal YE1007 41b856a91274dd5b8a54fd5b9db1a093 441 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 4 427 49.376 T 22-04-2016 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 YE1007 41b856a91274dd5b8a54fd5b9db1a093 441 SUPERFAMILY SSF52540 35 354 2.91E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1007 41b856a91274dd5b8a54fd5b9db1a093 441 Gene3D G3DSA:3.40.50.300 215 376 8.3E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1007 41b856a91274dd5b8a54fd5b9db1a093 441 PANTHER PTHR24031 3 434 2.3E-230 T 22-04-2016 YE1007 41b856a91274dd5b8a54fd5b9db1a093 441 SMART SM00490 262 343 1.8E-27 T 22-04-2016 IPR001650 Helicase, C-terminal YE1007 41b856a91274dd5b8a54fd5b9db1a093 441 Gene3D G3DSA:3.40.50.300 3 214 5.1E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1007 41b856a91274dd5b8a54fd5b9db1a093 441 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site YE1007 41b856a91274dd5b8a54fd5b9db1a093 441 PANTHER PTHR24031:SF334 3 434 2.3E-230 T 22-04-2016 YE3857 82e1c78a75a6c067044df69f44571221 822 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 806 32.614 T 22-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 YE3857 82e1c78a75a6c067044df69f44571221 822 Pfam PF01553 Acyltransferase 281 423 3.5E-26 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 YE3857 82e1c78a75a6c067044df69f44571221 822 SUPERFAMILY SSF69593 270 487 1.18E-25 T 22-04-2016 YE3857 82e1c78a75a6c067044df69f44571221 822 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 11 798 0.0 T 22-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 YE3857 82e1c78a75a6c067044df69f44571221 822 PIRSF PIRSF000437 19 810 0.0 T 22-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 YE3857 82e1c78a75a6c067044df69f44571221 822 SMART SM00563 299 426 6.3E-28 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 YE3857 82e1c78a75a6c067044df69f44571221 822 PANTHER PTHR12563 1 117 0.0 T 22-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 YE3857 82e1c78a75a6c067044df69f44571221 822 PANTHER PTHR12563 143 812 0.0 T 22-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 YE3857 82e1c78a75a6c067044df69f44571221 822 PANTHER PTHR12563:SF14 1 117 0.0 T 22-04-2016 YE3857 82e1c78a75a6c067044df69f44571221 822 PANTHER PTHR12563:SF14 143 812 0.0 T 22-04-2016 YE3857 82e1c78a75a6c067044df69f44571221 822 PIRSF PIRSF500064 2 814 0.0 T 22-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 YE1017 54c010c0c74b04142e2017f52005d1b4 226 Pfam PF00035 Double-stranded RNA binding motif 156 223 2.8E-15 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain YE1017 54c010c0c74b04142e2017f52005d1b4 226 PANTHER PTHR11207 4 225 9.5E-113 T 22-04-2016 YE1017 54c010c0c74b04142e2017f52005d1b4 226 Gene3D G3DSA:1.10.1520.10 6 148 1.2E-46 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 YE1017 54c010c0c74b04142e2017f52005d1b4 226 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 9 223 9.7E-74 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 YE1017 54c010c0c74b04142e2017f52005d1b4 226 ProSitePatterns PS00517 Ribonuclease III family signature. 38 46 - T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 YE1017 54c010c0c74b04142e2017f52005d1b4 226 SMART SM00535 21 149 1.5E-54 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 YE1017 54c010c0c74b04142e2017f52005d1b4 226 SUPERFAMILY SSF54768 109 223 1.29E-27 T 22-04-2016 YE1017 54c010c0c74b04142e2017f52005d1b4 226 Gene3D G3DSA:3.30.160.20 153 223 9.4E-29 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain YE1017 54c010c0c74b04142e2017f52005d1b4 226 Hamap MF_00104 Ribonuclease 3 [rnc]. 9 220 29.57 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 YE1017 54c010c0c74b04142e2017f52005d1b4 226 SMART SM00358 156 224 1.5E-23 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain YE1017 54c010c0c74b04142e2017f52005d1b4 226 SUPERFAMILY SSF69065 5 159 3.49E-49 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 YE1017 54c010c0c74b04142e2017f52005d1b4 226 Pfam PF14622 Ribonuclease-III-like 20 142 2.6E-33 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 YE3769 d2a4e955b684905a7f0a01e10bda28e4 478 PIRSF PIRSF005522 1 478 6.9E-233 T 22-04-2016 IPR016450 Uncharacterised conserved protein UCP005522 YE3769 d2a4e955b684905a7f0a01e10bda28e4 478 Pfam PF14403 Circularly permuted ATP-grasp type 2 78 451 9.7E-162 T 22-04-2016 IPR025841 Circularly permuted ATP-grasp type 2 YE3769 d2a4e955b684905a7f0a01e10bda28e4 478 PANTHER PTHR34595:SF3 10 476 6.6E-289 T 22-04-2016 YE3769 d2a4e955b684905a7f0a01e10bda28e4 478 PANTHER PTHR34595 10 476 6.6E-289 T 22-04-2016 YE3769 d2a4e955b684905a7f0a01e10bda28e4 478 SUPERFAMILY SSF56059 321 466 1.71E-64 T 22-04-2016 YE3769 d2a4e955b684905a7f0a01e10bda28e4 478 SUPERFAMILY SSF56059 21 216 1.71E-64 T 22-04-2016 YE2908 ea17fa58ff54d116aa64cc1a835a83c0 425 SUPERFAMILY SSF53383 1 422 1.36E-136 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YE2908 ea17fa58ff54d116aa64cc1a835a83c0 425 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 424 51.57 T 22-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 YE2908 ea17fa58ff54d116aa64cc1a835a83c0 425 PIRSF PIRSF000521 30 423 9.9E-31 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YE2908 ea17fa58ff54d116aa64cc1a835a83c0 425 PANTHER PTHR11986 4 421 4.1E-216 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YE2908 ea17fa58ff54d116aa64cc1a835a83c0 425 Pfam PF00202 Aminotransferase class-III 27 419 2.4E-131 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YE2908 ea17fa58ff54d116aa64cc1a835a83c0 425 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 242 279 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YE2908 ea17fa58ff54d116aa64cc1a835a83c0 425 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 13 420 2.3E-185 T 22-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 YE2908 ea17fa58ff54d116aa64cc1a835a83c0 425 Gene3D G3DSA:3.90.1150.10 2 61 7.4E-62 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YE2908 ea17fa58ff54d116aa64cc1a835a83c0 425 Gene3D G3DSA:3.90.1150.10 332 421 7.4E-62 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YE2908 ea17fa58ff54d116aa64cc1a835a83c0 425 PANTHER PTHR11986:SF8 4 421 4.1E-216 T 22-04-2016 YE2908 ea17fa58ff54d116aa64cc1a835a83c0 425 Gene3D G3DSA:3.40.640.10 62 329 1.1E-91 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YE0012 c9b806c1578ab278d4cc175ae57f392a 308 SUPERFAMILY SSF53613 5 304 7.17E-83 T 22-04-2016 IPR029056 Ribokinase-like YE0012 c9b806c1578ab278d4cc175ae57f392a 308 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 248 261 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 YE0012 c9b806c1578ab278d4cc175ae57f392a 308 Pfam PF00294 pfkB family carbohydrate kinase 5 296 8.3E-75 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB YE0012 c9b806c1578ab278d4cc175ae57f392a 308 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 7 301 6.6E-110 T 22-04-2016 IPR011877 Ribokinase, bacterial type GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|UniPathway: UPA00916 YE0012 c9b806c1578ab278d4cc175ae57f392a 308 Gene3D G3DSA:3.40.1190.20 5 306 6.9E-97 T 22-04-2016 IPR029056 Ribokinase-like YE0012 c9b806c1578ab278d4cc175ae57f392a 308 PANTHER PTHR10584:SF166 1 306 1.4E-107 T 22-04-2016 YE0012 c9b806c1578ab278d4cc175ae57f392a 308 PANTHER PTHR10584 1 306 1.4E-107 T 22-04-2016 YE0012 c9b806c1578ab278d4cc175ae57f392a 308 PRINTS PR00990 Ribokinase signature 175 190 5.4E-38 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 YE0012 c9b806c1578ab278d4cc175ae57f392a 308 PRINTS PR00990 Ribokinase signature 219 230 5.4E-38 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 YE0012 c9b806c1578ab278d4cc175ae57f392a 308 PRINTS PR00990 Ribokinase signature 35 54 5.4E-38 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 YE0012 c9b806c1578ab278d4cc175ae57f392a 308 PRINTS PR00990 Ribokinase signature 8 29 5.4E-38 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 YE0012 c9b806c1578ab278d4cc175ae57f392a 308 PRINTS PR00990 Ribokinase signature 107 120 5.4E-38 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 YE0948 93a687d3a62c1c4b761a4c70cf32c75b 268 SUPERFAMILY SSF161098 65 256 6.8E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE0948 93a687d3a62c1c4b761a4c70cf32c75b 268 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 262 6.7E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE0948 93a687d3a62c1c4b761a4c70cf32c75b 268 Gene3D G3DSA:1.10.3720.10 64 262 3.5E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE0948 93a687d3a62c1c4b761a4c70cf32c75b 268 PANTHER PTHR30465 1 267 2.0E-190 T 22-04-2016 YE0948 93a687d3a62c1c4b761a4c70cf32c75b 268 PANTHER PTHR30465:SF50 1 267 2.0E-190 T 22-04-2016 YE4139 e583917aef06455e4026acf11f38bdd3 649 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 384 413 7.1E-59 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE4139 e583917aef06455e4026acf11f38bdd3 649 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 461 488 7.1E-59 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE4139 e583917aef06455e4026acf11f38bdd3 649 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 490 519 7.1E-59 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE4139 e583917aef06455e4026acf11f38bdd3 649 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 538 567 7.1E-59 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE4139 e583917aef06455e4026acf11f38bdd3 649 SMART SM00304 310 362 7.3E-5 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YE4139 e583917aef06455e4026acf11f38bdd3 649 SMART SM01358 39 288 1.2E-49 T 22-04-2016 IPR032255 Helical bimodular sensor domain YE4139 e583917aef06455e4026acf11f38bdd3 649 Gene3D G3DSA:1.10.287.950 378 582 4.0E-63 T 22-04-2016 YE4139 e583917aef06455e4026acf11f38bdd3 649 PANTHER PTHR32089:SF35 266 613 1.3E-222 T 22-04-2016 YE4139 e583917aef06455e4026acf11f38bdd3 649 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 422 609 9.0E-63 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 YE4139 e583917aef06455e4026acf11f38bdd3 649 PANTHER PTHR32089 266 613 1.3E-222 T 22-04-2016 YE4139 e583917aef06455e4026acf11f38bdd3 649 SMART SM00283 363 610 2.4E-90 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 YE4139 e583917aef06455e4026acf11f38bdd3 649 Pfam PF16591 Helical bimodular sensor domain 57 282 2.1E-15 T 22-04-2016 IPR032255 Helical bimodular sensor domain YE4139 e583917aef06455e4026acf11f38bdd3 649 SUPERFAMILY SSF58104 330 612 6.93E-75 T 22-04-2016 YE4139 e583917aef06455e4026acf11f38bdd3 649 Pfam PF00672 HAMP domain 291 359 4.4E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YE1966 d1bffaaf24e349aa1a9558d24fffc6d9 253 SMART SM00014 76 227 4.1E-32 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YE1966 d1bffaaf24e349aa1a9558d24fffc6d9 253 SUPERFAMILY SSF48317 2 118 1.7E-30 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YE1966 d1bffaaf24e349aa1a9558d24fffc6d9 253 SUPERFAMILY SSF48317 150 234 1.7E-30 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YE1966 d1bffaaf24e349aa1a9558d24fffc6d9 253 Gene3D G3DSA:1.20.144.10 36 124 6.6E-25 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YE1966 d1bffaaf24e349aa1a9558d24fffc6d9 253 Gene3D G3DSA:1.20.144.10 156 231 6.6E-25 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YE1966 d1bffaaf24e349aa1a9558d24fffc6d9 253 Pfam PF01569 PAP2 superfamily 80 232 1.9E-26 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YE1966 d1bffaaf24e349aa1a9558d24fffc6d9 253 PANTHER PTHR14969:SF22 157 253 2.3E-93 T 22-04-2016 YE1966 d1bffaaf24e349aa1a9558d24fffc6d9 253 PANTHER PTHR14969:SF22 1 118 2.3E-93 T 22-04-2016 YE1966 d1bffaaf24e349aa1a9558d24fffc6d9 253 PANTHER PTHR14969 157 253 2.3E-93 T 22-04-2016 YE1966 d1bffaaf24e349aa1a9558d24fffc6d9 253 PANTHER PTHR14969 1 118 2.3E-93 T 22-04-2016 YE1426 077dc99d2acf68351fe7f32865430c23 115 Pfam PF13989 YejG-like protein 4 109 4.8E-51 T 22-04-2016 IPR020489 Uncharacterised protein family YejG YE1426 077dc99d2acf68351fe7f32865430c23 115 ProDom PD073777 YEJG CYTOPLASMIC SIMILAR Y2914 YPO1269 STY2456 ECS3073 ESCHERICHIA COLI 1 115 2.0E-53 T 22-04-2016 IPR020489 Uncharacterised protein family YejG YE2621 fa23d5a0f259cde65f256138849caf95 525 Gene3D G3DSA:3.40.50.980 16 178 1.6E-25 T 22-04-2016 YE2621 fa23d5a0f259cde65f256138849caf95 525 Pfam PF13193 AMP-binding enzyme C-terminal domain 431 506 1.5E-14 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain YE2621 fa23d5a0f259cde65f256138849caf95 525 PANTHER PTHR24095:SF123 15 519 1.7E-262 T 22-04-2016 YE2621 fa23d5a0f259cde65f256138849caf95 525 SUPERFAMILY SSF56801 10 518 1.07E-126 T 22-04-2016 YE2621 fa23d5a0f259cde65f256138849caf95 525 Gene3D G3DSA:3.30.300.30 417 519 6.3E-26 T 22-04-2016 YE2621 fa23d5a0f259cde65f256138849caf95 525 Pfam PF00501 AMP-binding enzyme 21 422 3.6E-79 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 YE2621 fa23d5a0f259cde65f256138849caf95 525 Gene3D G3DSA:2.30.38.10 341 416 2.8E-22 T 22-04-2016 YE2621 fa23d5a0f259cde65f256138849caf95 525 ProSitePatterns PS00455 Putative AMP-binding domain signature. 174 185 - T 22-04-2016 IPR020845 AMP-binding, conserved site YE2621 fa23d5a0f259cde65f256138849caf95 525 PANTHER PTHR24095 15 519 1.7E-262 T 22-04-2016 YE2621 fa23d5a0f259cde65f256138849caf95 525 Gene3D G3DSA:3.40.50.980 179 331 1.1E-36 T 22-04-2016 YE3255 c1b08dce13f27befce24a055739dce6f 271 PANTHER PTHR30429 3 271 8.3E-156 T 22-04-2016 IPR004872 Lipoprotein NlpA family YE3255 c1b08dce13f27befce24a055739dce6f 271 Gene3D G3DSA:3.40.190.10 30 162 2.8E-59 T 22-04-2016 YE3255 c1b08dce13f27befce24a055739dce6f 271 PIRSF PIRSF002854 1 271 3.3E-105 T 22-04-2016 IPR004872 Lipoprotein NlpA family YE3255 c1b08dce13f27befce24a055739dce6f 271 PANTHER PTHR30429:SF1 3 271 8.3E-156 T 22-04-2016 YE3255 c1b08dce13f27befce24a055739dce6f 271 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 14 271 7.5E-145 T 22-04-2016 IPR004872 Lipoprotein NlpA family YE3255 c1b08dce13f27befce24a055739dce6f 271 Pfam PF03180 NLPA lipoprotein 33 271 2.1E-98 T 22-04-2016 IPR004872 Lipoprotein NlpA family YE3255 c1b08dce13f27befce24a055739dce6f 271 SUPERFAMILY SSF53850 33 271 1.01E-82 T 22-04-2016 YE3912 9e3fed48ee66402aee55fea0a390cc77 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 22-04-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3912 9e3fed48ee66402aee55fea0a390cc77 104 Pfam PF00467 KOW motif 8 35 7.0E-5 T 22-04-2016 IPR005824 KOW YE3912 9e3fed48ee66402aee55fea0a390cc77 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 20.052 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3912 9e3fed48ee66402aee55fea0a390cc77 104 PANTHER PTHR12903 4 103 1.1E-49 T 22-04-2016 YE3912 9e3fed48ee66402aee55fea0a390cc77 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 103 4.2E-23 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3912 9e3fed48ee66402aee55fea0a390cc77 104 SUPERFAMILY SSF50104 4 100 9.03E-33 T 22-04-2016 IPR008991 Translation protein SH3-like domain YE3912 9e3fed48ee66402aee55fea0a390cc77 104 Gene3D G3DSA:2.30.30.30 3 92 7.1E-22 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 YE3912 9e3fed48ee66402aee55fea0a390cc77 104 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 8.0E-40 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3912 9e3fed48ee66402aee55fea0a390cc77 104 SMART SM00739 4 31 0.0014 T 22-04-2016 IPR005824 KOW YE1978 a08f9517666b24e74570f16443309f10 248 SMART SM01134 67 227 1.3E-51 T 22-04-2016 YE1978 a08f9517666b24e74570f16443309f10 248 Pfam PF08220 DeoR-like helix-turn-helix domain 4 59 4.7E-15 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YE1978 a08f9517666b24e74570f16443309f10 248 Gene3D G3DSA:3.40.50.1360 71 217 5.6E-10 T 22-04-2016 YE1978 a08f9517666b24e74570f16443309f10 248 ProSitePatterns PS00894 DeoR-type HTH domain signature. 4 38 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 YE1978 a08f9517666b24e74570f16443309f10 248 Gene3D G3DSA:1.10.10.10 1 50 1.3E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1978 a08f9517666b24e74570f16443309f10 248 PANTHER PTHR30363:SF16 1 248 8.8E-109 T 22-04-2016 YE1978 a08f9517666b24e74570f16443309f10 248 SUPERFAMILY SSF100950 67 227 3.93E-26 T 22-04-2016 YE1978 a08f9517666b24e74570f16443309f10 248 SMART SM00420 4 56 4.8E-20 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YE1978 a08f9517666b24e74570f16443309f10 248 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 36 54 2.4E-6 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YE1978 a08f9517666b24e74570f16443309f10 248 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 22 36 2.4E-6 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YE1978 a08f9517666b24e74570f16443309f10 248 SUPERFAMILY SSF46785 1 59 3.05E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1978 a08f9517666b24e74570f16443309f10 248 PANTHER PTHR30363 1 248 8.8E-109 T 22-04-2016 YE1978 a08f9517666b24e74570f16443309f10 248 Pfam PF00455 DeoR C terminal sensor domain 71 226 3.1E-41 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain YE1356 839548f0b2e8c600db59f6ea3e539a49 485 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 9 475 6.6E-134 T 22-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 YE1356 839548f0b2e8c600db59f6ea3e539a49 485 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 6 475 17.693 T 22-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 YE1356 839548f0b2e8c600db59f6ea3e539a49 485 Pfam PF00361 Proton-conducting membrane transporter 122 420 8.4E-84 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 YE1356 839548f0b2e8c600db59f6ea3e539a49 485 PANTHER PTHR22773 1 485 1.4E-198 T 22-04-2016 YE1356 839548f0b2e8c600db59f6ea3e539a49 485 PANTHER PTHR22773:SF41 1 485 1.4E-198 T 22-04-2016 YE2087 7dc6d641beaa3ae82de0e52f7b4aba83 280 Gene3D G3DSA:2.40.10.10 157 247 1.8E-8 T 22-04-2016 YE2087 7dc6d641beaa3ae82de0e52f7b4aba83 280 SUPERFAMILY SSF50494 2 270 1.69E-30 T 22-04-2016 IPR009003 Peptidase S1, PA clan YE2087 7dc6d641beaa3ae82de0e52f7b4aba83 280 PRINTS PR00839 V8 serine protease family signature 70 87 3.3E-18 T 22-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 YE2087 7dc6d641beaa3ae82de0e52f7b4aba83 280 PRINTS PR00839 V8 serine protease family signature 45 62 3.3E-18 T 22-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 YE2087 7dc6d641beaa3ae82de0e52f7b4aba83 280 PRINTS PR00839 V8 serine protease family signature 179 192 3.3E-18 T 22-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 YE2087 7dc6d641beaa3ae82de0e52f7b4aba83 280 PRINTS PR00839 V8 serine protease family signature 213 229 3.3E-18 T 22-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 YE2087 7dc6d641beaa3ae82de0e52f7b4aba83 280 PRINTS PR00839 V8 serine protease family signature 233 245 3.3E-18 T 22-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 YE2087 7dc6d641beaa3ae82de0e52f7b4aba83 280 Gene3D G3DSA:2.40.10.10 55 156 4.8E-15 T 22-04-2016 YE2087 7dc6d641beaa3ae82de0e52f7b4aba83 280 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 218 229 - T 22-04-2016 IPR033116 Serine proteases, trypsin family, serine active site YE2087 7dc6d641beaa3ae82de0e52f7b4aba83 280 Pfam PF00089 Trypsin 50 245 9.1E-15 T 22-04-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 YE2087 7dc6d641beaa3ae82de0e52f7b4aba83 280 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 81 86 - T 22-04-2016 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 YE2087 7dc6d641beaa3ae82de0e52f7b4aba83 280 PANTHER PTHR15462 38 265 3.2E-51 T 22-04-2016 YE2087 7dc6d641beaa3ae82de0e52f7b4aba83 280 SMART SM00020 45 254 0.0027 T 22-04-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 YE1011 580fd1059e9ac7c462378c5d502b1f0b 218 SUPERFAMILY SSF89069 1 66 2.48E-20 T 22-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 YE1011 580fd1059e9ac7c462378c5d502b1f0b 218 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 132 188 6.5E-22 T 22-04-2016 IPR005573 Anti sigma-E protein RseA, C-terminal YE1011 580fd1059e9ac7c462378c5d502b1f0b 218 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 1 87 2.6E-36 T 22-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 YE1011 580fd1059e9ac7c462378c5d502b1f0b 218 PANTHER PTHR38104 1 218 2.1E-80 T 22-04-2016 YE1011 580fd1059e9ac7c462378c5d502b1f0b 218 PIRSF PIRSF016938 1 202 4.8E-32 T 22-04-2016 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0006950|GO:0016989 YE2882 9ad51e7ce934ae2200ad494ab071d8a4 179 SUPERFAMILY SSF55154 8 177 4.74E-36 T 22-04-2016 IPR033469 CYTH-like domain YE2882 9ad51e7ce934ae2200ad494ab071d8a4 179 ProDom PD009560 CYCLASE ADENYLATE CYCLASE ADENYLYL CYAB LYASE CLASS CYAB-TYPE THERMOPHILIC MJ0240 9 148 3.0E-7 T 22-04-2016 YE2882 9ad51e7ce934ae2200ad494ab071d8a4 179 PANTHER PTHR21028:SF2 2 177 5.4E-43 T 22-04-2016 YE2882 9ad51e7ce934ae2200ad494ab071d8a4 179 SMART SM01118 8 179 7.8E-12 T 22-04-2016 IPR023577 CYTH domain YE2882 9ad51e7ce934ae2200ad494ab071d8a4 179 PANTHER PTHR21028 2 177 5.4E-43 T 22-04-2016 YE2882 9ad51e7ce934ae2200ad494ab071d8a4 179 Gene3D G3DSA:2.40.320.10 9 177 2.7E-36 T 22-04-2016 IPR023577 CYTH domain YE2882 9ad51e7ce934ae2200ad494ab071d8a4 179 Pfam PF01928 CYTH domain 9 173 4.9E-22 T 22-04-2016 IPR023577 CYTH domain YE1328 9a5ea16f8583ba3c9831165c16e42e3f 418 PANTHER PTHR33843:SF4 1 418 4.3E-253 T 22-04-2016 YE1328 9a5ea16f8583ba3c9831165c16e42e3f 418 Pfam PF03611 PTS system sugar-specific permease component 11 405 2.4E-149 T 22-04-2016 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 YE1328 9a5ea16f8583ba3c9831165c16e42e3f 418 PANTHER PTHR33843 1 418 4.3E-253 T 22-04-2016 YE0171 d88cfa7458afe17024c3c637bf81ffe6 376 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 22 370 1.5E-127 T 22-04-2016 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain YE0171 d88cfa7458afe17024c3c637bf81ffe6 376 Hamap MF_02028 UDP-N-acetylglucosamine 2-epimerase [wecB]. 16 374 70.178 T 22-04-2016 IPR032892 UDP-N-acetylglucosamine 2-epimerase WecB GO:0008761|GO:0009246 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335|UniPathway: UPA00566 YE0171 d88cfa7458afe17024c3c637bf81ffe6 376 PANTHER PTHR18964:SF2 1 372 9.2E-217 T 22-04-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 YE0171 d88cfa7458afe17024c3c637bf81ffe6 376 Gene3D G3DSA:3.40.50.2000 211 371 1.0E-66 T 22-04-2016 YE0171 d88cfa7458afe17024c3c637bf81ffe6 376 SUPERFAMILY SSF53756 2 372 7.68E-142 T 22-04-2016 YE0171 d88cfa7458afe17024c3c637bf81ffe6 376 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 1 372 2.3E-171 T 22-04-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 YE0171 d88cfa7458afe17024c3c637bf81ffe6 376 PANTHER PTHR18964 1 372 9.2E-217 T 22-04-2016 YE0171 d88cfa7458afe17024c3c637bf81ffe6 376 Gene3D G3DSA:3.40.50.2000 2 210 5.7E-90 T 22-04-2016 YE3061 d399efc9d728d6ca99f2d6129d222852 918 PANTHER PTHR24093:SF319 160 913 0.0 T 22-04-2016 YE3061 d399efc9d728d6ca99f2d6129d222852 918 SUPERFAMILY SSF81665 504 599 1.44E-10 T 22-04-2016 YE3061 d399efc9d728d6ca99f2d6129d222852 918 SUPERFAMILY SSF81665 370 407 1.44E-10 T 22-04-2016 YE3061 d399efc9d728d6ca99f2d6129d222852 918 SUPERFAMILY SSF81665 851 869 1.44E-10 T 22-04-2016 YE3061 d399efc9d728d6ca99f2d6129d222852 918 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 375 880 2.0E-84 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 YE3061 d399efc9d728d6ca99f2d6129d222852 918 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 336 911 1.2E-178 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 YE3061 d399efc9d728d6ca99f2d6129d222852 918 ProSitePatterns PS01229 Hypothetical cof family signature 2. 802 824 - T 22-04-2016 YE3061 d399efc9d728d6ca99f2d6129d222852 918 Pfam PF00122 E1-E2 ATPase 374 595 2.6E-61 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 YE3061 d399efc9d728d6ca99f2d6129d222852 918 ProSitePatterns PS01047 Heavy-metal-associated domain. 9 38 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 YE3061 d399efc9d728d6ca99f2d6129d222852 918 ProSitePatterns PS01047 Heavy-metal-associated domain. 189 218 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 YE3061 d399efc9d728d6ca99f2d6129d222852 918 Gene3D G3DSA:3.40.1110.10 620 729 1.1E-17 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 YE3061 d399efc9d728d6ca99f2d6129d222852 918 Gene3D G3DSA:3.30.70.100 71 130 7.1E-16 T 22-04-2016 YE3061 d399efc9d728d6ca99f2d6129d222852 918 PANTHER PTHR24093 160 913 0.0 T 22-04-2016 YE3061 d399efc9d728d6ca99f2d6129d222852 918 SUPERFAMILY SSF55008 70 134 7.85E-13 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 YE3061 d399efc9d728d6ca99f2d6129d222852 918 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 802 818 8.3E-8 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 YE3061 d399efc9d728d6ca99f2d6129d222852 918 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 833 858 8.3E-8 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 YE3061 d399efc9d728d6ca99f2d6129d222852 918 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 774 790 8.3E-8 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 YE3061 d399efc9d728d6ca99f2d6129d222852 918 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 727 738 6.8E-25 T 22-04-2016 YE3061 d399efc9d728d6ca99f2d6129d222852 918 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 605 619 6.8E-25 T 22-04-2016 YE3061 d399efc9d728d6ca99f2d6129d222852 918 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 802 821 6.8E-25 T 22-04-2016 YE3061 d399efc9d728d6ca99f2d6129d222852 918 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 453 467 6.8E-25 T 22-04-2016 YE3061 d399efc9d728d6ca99f2d6129d222852 918 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 825 837 6.8E-25 T 22-04-2016 YE3061 d399efc9d728d6ca99f2d6129d222852 918 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 749 759 6.8E-25 T 22-04-2016 YE3061 d399efc9d728d6ca99f2d6129d222852 918 Gene3D G3DSA:3.30.70.100 185 250 2.4E-22 T 22-04-2016 YE3061 d399efc9d728d6ca99f2d6129d222852 918 SUPERFAMILY SSF55008 1 67 1.83E-11 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 YE3061 d399efc9d728d6ca99f2d6129d222852 918 SUPERFAMILY SSF81653 406 503 9.29E-24 T 22-04-2016 YE3061 d399efc9d728d6ca99f2d6129d222852 918 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 317 911 1.8E-185 T 22-04-2016 YE3061 d399efc9d728d6ca99f2d6129d222852 918 Pfam PF00403 Heavy-metal-associated domain 7 62 2.3E-8 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 YE3061 d399efc9d728d6ca99f2d6129d222852 918 Pfam PF00403 Heavy-metal-associated domain 191 243 1.7E-12 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 YE3061 d399efc9d728d6ca99f2d6129d222852 918 Pfam PF00403 Heavy-metal-associated domain 73 128 3.6E-8 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 YE3061 d399efc9d728d6ca99f2d6129d222852 918 SUPERFAMILY SSF55008 184 250 1.7E-17 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 YE3061 d399efc9d728d6ca99f2d6129d222852 918 Gene3D G3DSA:2.70.150.10 335 503 1.2E-25 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 YE3061 d399efc9d728d6ca99f2d6129d222852 918 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 607 613 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site YE3061 d399efc9d728d6ca99f2d6129d222852 918 SUPERFAMILY SSF56784 603 623 1.1E-60 T 22-04-2016 IPR023214 HAD-like domain YE3061 d399efc9d728d6ca99f2d6129d222852 918 SUPERFAMILY SSF56784 660 908 1.1E-60 T 22-04-2016 IPR023214 HAD-like domain YE3061 d399efc9d728d6ca99f2d6129d222852 918 Gene3D G3DSA:3.40.50.1000 578 619 1.8E-55 T 22-04-2016 IPR023214 HAD-like domain YE3061 d399efc9d728d6ca99f2d6129d222852 918 Gene3D G3DSA:3.40.50.1000 730 871 1.8E-55 T 22-04-2016 IPR023214 HAD-like domain YE3061 d399efc9d728d6ca99f2d6129d222852 918 Pfam PF00702 haloacid dehalogenase-like hydrolase 602 816 6.4E-49 T 22-04-2016 YE3061 d399efc9d728d6ca99f2d6129d222852 918 Gene3D G3DSA:3.30.70.100 3 64 2.3E-13 T 22-04-2016 YE2858 f461e9edd8cb193097ccd8d0a896b40b 296 SUPERFAMILY SSF103481 187 290 9.15E-12 T 22-04-2016 YE2858 f461e9edd8cb193097ccd8d0a896b40b 296 Pfam PF00892 EamA-like transporter family 153 287 1.7E-17 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YE2858 f461e9edd8cb193097ccd8d0a896b40b 296 Pfam PF00892 EamA-like transporter family 16 144 6.0E-21 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YE2858 f461e9edd8cb193097ccd8d0a896b40b 296 SUPERFAMILY SSF103481 45 147 9.55E-12 T 22-04-2016 YE2858 f461e9edd8cb193097ccd8d0a896b40b 296 PANTHER PTHR32322 1 293 3.1E-152 T 22-04-2016 YE2858 f461e9edd8cb193097ccd8d0a896b40b 296 PANTHER PTHR32322:SF8 1 293 3.1E-152 T 22-04-2016 YE2712 8c789aed0690e8b550ea1c7a81acdcea 271 Gene3D G3DSA:3.40.50.300 1 236 3.4E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2712 8c789aed0690e8b550ea1c7a81acdcea 271 TIGRFAM TIGR01166 cbiO: cobalt ABC transporter, ATP-binding protein 11 199 3.9E-81 T 22-04-2016 IPR005876 Cobalt transport protein ATP-binding subunit GO:0006824 YE2712 8c789aed0690e8b550ea1c7a81acdcea 271 SMART SM00382 26 212 9.1E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain YE2712 8c789aed0690e8b550ea1c7a81acdcea 271 PANTHER PTHR24220 3 238 2.1E-80 T 22-04-2016 YE2712 8c789aed0690e8b550ea1c7a81acdcea 271 SUPERFAMILY SSF52540 3 233 4.22E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2712 8c789aed0690e8b550ea1c7a81acdcea 271 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE2712 8c789aed0690e8b550ea1c7a81acdcea 271 PANTHER PTHR24220:SF66 3 238 2.1E-80 T 22-04-2016 YE2712 8c789aed0690e8b550ea1c7a81acdcea 271 Pfam PF00005 ABC transporter 17 165 4.6E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE3891 53c1028130662358041930a1d849e30c 429 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 8 429 3.5E-172 T 22-04-2016 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YE3891 53c1028130662358041930a1d849e30c 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 411 428 5.4E-31 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YE3891 53c1028130662358041930a1d849e30c 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 367 383 5.4E-31 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YE3891 53c1028130662358041930a1d849e30c 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 317 329 5.4E-31 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YE3891 53c1028130662358041930a1d849e30c 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 222 236 5.4E-31 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YE3891 53c1028130662358041930a1d849e30c 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 251 261 5.4E-31 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YE3891 53c1028130662358041930a1d849e30c 429 Gene3D G3DSA:3.40.50.150 232 428 8.1E-58 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE3891 53c1028130662358041930a1d849e30c 429 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 316 327 - T 22-04-2016 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YE3891 53c1028130662358041930a1d849e30c 429 Pfam PF01189 16S rRNA methyltransferase RsmB/F 241 426 5.5E-75 T 22-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YE3891 53c1028130662358041930a1d849e30c 429 Gene3D G3DSA:1.10.287.730 148 172 2.9E-14 T 22-04-2016 YE3891 53c1028130662358041930a1d849e30c 429 Gene3D G3DSA:3.30.70.1170 173 230 1.7E-26 T 22-04-2016 YE3891 53c1028130662358041930a1d849e30c 429 PANTHER PTHR22807:SF30 33 429 4.0E-139 T 22-04-2016 YE3891 53c1028130662358041930a1d849e30c 429 Hamap MF_01856 Ribosomal RNA small subunit methyltransferase B [rsmB]. 1 429 69.407 T 22-04-2016 IPR023541 rRNA small subunit methyltransferase B, enterobacteriaceae GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YE3891 53c1028130662358041930a1d849e30c 429 Pfam PF01029 NusB family 7 127 4.7E-24 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 YE3891 53c1028130662358041930a1d849e30c 429 Gene3D G3DSA:1.10.940.10 3 147 5.5E-45 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 YE3891 53c1028130662358041930a1d849e30c 429 PANTHER PTHR22807 33 429 4.0E-139 T 22-04-2016 YE3891 53c1028130662358041930a1d849e30c 429 SUPERFAMILY SSF53335 142 429 4.22E-78 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE3891 53c1028130662358041930a1d849e30c 429 SUPERFAMILY SSF48013 6 149 9.32E-36 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 YE0706 bf96c449d66e582b29c91ccf937697c4 120 PIRSF PIRSF006287 1 120 9.5E-52 T 22-04-2016 IPR008249 Uncharacterised protein family UPF0231 YE0706 bf96c449d66e582b29c91ccf937697c4 120 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 117 1.7E-46 T 22-04-2016 IPR008249 Uncharacterised protein family UPF0231 YE0706 bf96c449d66e582b29c91ccf937697c4 120 Hamap MF_01053 UPF0231 protein YacL [yacL]. 1 119 30.634 T 22-04-2016 IPR008249 Uncharacterised protein family UPF0231 YE0706 bf96c449d66e582b29c91ccf937697c4 120 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 117 1.0E-55 T 22-04-2016 IPR008249 Uncharacterised protein family UPF0231 YE1379 19226d592a6fab01570ccf32de468a75 412 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 2 392 3.6E-116 T 22-04-2016 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 YE1379 19226d592a6fab01570ccf32de468a75 412 Gene3D G3DSA:2.30.38.10 250 299 2.6E-9 T 22-04-2016 YE1379 19226d592a6fab01570ccf32de468a75 412 ProSitePatterns PS00455 Putative AMP-binding domain signature. 87 98 - T 22-04-2016 IPR020845 AMP-binding, conserved site YE1379 19226d592a6fab01570ccf32de468a75 412 PANTHER PTHR24096:SF109 1 405 1.6E-183 T 22-04-2016 YE1379 19226d592a6fab01570ccf32de468a75 412 Gene3D G3DSA:3.30.300.30 302 394 9.8E-16 T 22-04-2016 YE1379 19226d592a6fab01570ccf32de468a75 412 Pfam PF13193 AMP-binding enzyme C-terminal domain 316 384 1.8E-6 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain YE1379 19226d592a6fab01570ccf32de468a75 412 Pfam PF00501 AMP-binding enzyme 1 304 1.3E-39 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 YE1379 19226d592a6fab01570ccf32de468a75 412 PANTHER PTHR24096 1 405 1.6E-183 T 22-04-2016 YE1379 19226d592a6fab01570ccf32de468a75 412 Gene3D G3DSA:3.40.50.980 95 234 5.0E-22 T 22-04-2016 YE1379 19226d592a6fab01570ccf32de468a75 412 SUPERFAMILY SSF56801 1 397 1.31E-77 T 22-04-2016 YE1379 19226d592a6fab01570ccf32de468a75 412 Gene3D G3DSA:3.40.50.980 1 94 3.0E-8 T 22-04-2016 YE3812 02c71965a510f8f31c07f502daea1019 449 Gene3D G3DSA:3.30.470.20 204 444 6.3E-100 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 YE3812 02c71965a510f8f31c07f502daea1019 449 SMART SM00878 336 441 3.2E-65 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal YE3812 02c71965a510f8f31c07f502daea1019 449 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 447 5.1E-250 T 22-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 YE3812 02c71965a510f8f31c07f502daea1019 449 SUPERFAMILY SSF52440 1 113 3.67E-46 T 22-04-2016 IPR016185 Pre-ATP-grasp domain YE3812 02c71965a510f8f31c07f502daea1019 449 Gene3D G3DSA:3.30.1490.20 130 203 2.9E-30 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 YE3812 02c71965a510f8f31c07f502daea1019 449 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 1.2E-43 T 22-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain YE3812 02c71965a510f8f31c07f502daea1019 449 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 YE3812 02c71965a510f8f31c07f502daea1019 449 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 323 4.9E-85 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 YE3812 02c71965a510f8f31c07f502daea1019 449 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 1.2E-38 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal YE3812 02c71965a510f8f31c07f502daea1019 449 Gene3D G3DSA:3.40.50.20 1 129 2.3E-50 T 22-04-2016 IPR016185 Pre-ATP-grasp domain YE3812 02c71965a510f8f31c07f502daea1019 449 SUPERFAMILY SSF56059 83 347 2.36E-68 T 22-04-2016 YE3812 02c71965a510f8f31c07f502daea1019 449 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 YE3812 02c71965a510f8f31c07f502daea1019 449 SUPERFAMILY SSF51246 331 444 1.31E-43 T 22-04-2016 IPR011054 Rudiment single hybrid motif YE3812 02c71965a510f8f31c07f502daea1019 449 PANTHER PTHR18866 1 442 0.0 T 22-04-2016 YE2172 5c1c3cf553f74a54c41c5e28ddf8028c 123 PANTHER PTHR10072:SF47 1 123 3.3E-78 T 22-04-2016 YE2172 5c1c3cf553f74a54c41c5e28ddf8028c 123 Pfam PF01521 Iron-sulphur cluster biosynthesis 19 119 2.2E-18 T 22-04-2016 IPR000361 FeS cluster biogenesis YE2172 5c1c3cf553f74a54c41c5e28ddf8028c 123 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 104 121 - T 22-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site YE2172 5c1c3cf553f74a54c41c5e28ddf8028c 123 Gene3D G3DSA:2.60.300.12 19 112 8.2E-28 T 22-04-2016 IPR000361 FeS cluster biogenesis YE2172 5c1c3cf553f74a54c41c5e28ddf8028c 123 PANTHER PTHR10072 1 123 3.3E-78 T 22-04-2016 YE2172 5c1c3cf553f74a54c41c5e28ddf8028c 123 SUPERFAMILY SSF89360 19 112 1.73E-26 T 22-04-2016 IPR000361 FeS cluster biogenesis YE2172 5c1c3cf553f74a54c41c5e28ddf8028c 123 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 19 122 9.8E-32 T 22-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 YE3267 95b4d390df469e951635e36651bb20dd 713 Gene3D G3DSA:3.90.100.10 588 709 7.0E-32 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 YE3267 95b4d390df469e951635e36651bb20dd 713 Gene3D G3DSA:3.90.1150.10 427 587 2.5E-62 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YE3267 95b4d390df469e951635e36651bb20dd 713 Gene3D G3DSA:3.40.640.10 130 423 1.2E-99 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YE3267 95b4d390df469e951635e36651bb20dd 713 PANTHER PTHR11751 510 630 6.5E-245 T 22-04-2016 YE3267 95b4d390df469e951635e36651bb20dd 713 PANTHER PTHR11751 482 490 6.5E-245 T 22-04-2016 YE3267 95b4d390df469e951635e36651bb20dd 713 PANTHER PTHR11751 131 459 6.5E-245 T 22-04-2016 YE3267 95b4d390df469e951635e36651bb20dd 713 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 130 545 1.8E-184 T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 YE3267 95b4d390df469e951635e36651bb20dd 713 SUPERFAMILY SSF53383 130 561 2.89E-100 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YE3267 95b4d390df469e951635e36651bb20dd 713 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 570 700 1.4E-41 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 YE3267 95b4d390df469e951635e36651bb20dd 713 PIRSF PIRSF009393 1 712 2.2E-270 T 22-04-2016 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 YE3267 95b4d390df469e951635e36651bb20dd 713 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 362 376 - T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 YE3267 95b4d390df469e951635e36651bb20dd 713 PANTHER PTHR11751:SF406 510 630 6.5E-245 T 22-04-2016 YE3267 95b4d390df469e951635e36651bb20dd 713 PANTHER PTHR11751:SF406 482 490 6.5E-245 T 22-04-2016 YE3267 95b4d390df469e951635e36651bb20dd 713 PANTHER PTHR11751:SF406 131 459 6.5E-245 T 22-04-2016 YE3267 95b4d390df469e951635e36651bb20dd 713 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 14 124 3.0E-27 T 22-04-2016 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 YE3267 95b4d390df469e951635e36651bb20dd 713 SUPERFAMILY SSF55904 566 708 1.57E-39 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 YE3194 1e3805cd640d2f32b579dc7f7f8bc91b 164 Pfam PF00583 Acetyltransferase (GNAT) family 73 147 4.0E-12 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YE3194 1e3805cd640d2f32b579dc7f7f8bc91b 164 PANTHER PTHR23091 46 151 1.0E-16 T 22-04-2016 YE3194 1e3805cd640d2f32b579dc7f7f8bc91b 164 PANTHER PTHR23091 1 28 1.0E-16 T 22-04-2016 YE3194 1e3805cd640d2f32b579dc7f7f8bc91b 164 SUPERFAMILY SSF55729 1 152 4.15E-24 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE3194 1e3805cd640d2f32b579dc7f7f8bc91b 164 Gene3D G3DSA:3.40.630.30 1 155 1.6E-27 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE3667 7f53c213bf5d5075e1d04ae5aff3cff0 386 PANTHER PTHR30094 6 385 5.8E-169 T 22-04-2016 YE3667 7f53c213bf5d5075e1d04ae5aff3cff0 386 SUPERFAMILY SSF56059 1 168 2.47E-93 T 22-04-2016 YE3667 7f53c213bf5d5075e1d04ae5aff3cff0 386 SUPERFAMILY SSF56059 266 383 2.47E-93 T 22-04-2016 YE3667 7f53c213bf5d5075e1d04ae5aff3cff0 386 SUPERFAMILY SSF52440 174 279 1.04E-41 T 22-04-2016 IPR016185 Pre-ATP-grasp domain YE3667 7f53c213bf5d5075e1d04ae5aff3cff0 386 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 384 1.8E-165 T 22-04-2016 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain YE3667 7f53c213bf5d5075e1d04ae5aff3cff0 386 PANTHER PTHR30094:SF0 6 385 5.8E-169 T 22-04-2016 YE4121 956ca4423671f068f41c18362d7505fc 331 Gene3D G3DSA:3.40.50.2300 143 317 5.4E-47 T 22-04-2016 YE4121 956ca4423671f068f41c18362d7505fc 331 PANTHER PTHR30036 1 331 3.7E-185 T 22-04-2016 YE4121 956ca4423671f068f41c18362d7505fc 331 Gene3D G3DSA:3.40.50.2300 25 142 3.5E-34 T 22-04-2016 YE4121 956ca4423671f068f41c18362d7505fc 331 TIGRFAM TIGR02634 xylF: D-xylose ABC transporter, D-xylose-binding protein 28 330 2.1E-164 T 22-04-2016 IPR013456 D-xylose ABC transporter, substrate-binding protein GO:0015753|GO:0048029 YE4121 956ca4423671f068f41c18362d7505fc 331 SUPERFAMILY SSF53822 24 317 3.08E-71 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YE4121 956ca4423671f068f41c18362d7505fc 331 Pfam PF13407 Periplasmic binding protein domain 38 286 9.2E-61 T 22-04-2016 IPR025997 Periplasmic binding protein YE4121 956ca4423671f068f41c18362d7505fc 331 PANTHER PTHR30036:SF1 1 331 3.7E-185 T 22-04-2016 YE3222 3e773a60485fbfc7797c6e6e5a22e7f7 254 Gene3D G3DSA:3.60.20.10 1 248 1.2E-66 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal YE3222 3e773a60485fbfc7797c6e6e5a22e7f7 254 SUPERFAMILY SSF56235 2 252 1.76E-50 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal YE3222 3e773a60485fbfc7797c6e6e5a22e7f7 254 PANTHER PTHR11907 1 254 8.9E-132 T 22-04-2016 YE3222 3e773a60485fbfc7797c6e6e5a22e7f7 254 Pfam PF13230 Glutamine amidotransferases class-II 1 252 9.9E-113 T 22-04-2016 IPR026869 Putative glutamine amidotransferase type 2 YE3222 3e773a60485fbfc7797c6e6e5a22e7f7 254 PANTHER PTHR11907:SF10 1 254 8.9E-132 T 22-04-2016 YE0207 ad82338da219649a9a67f59f71c1d51a 351 Gene3D G3DSA:3.40.50.1820 33 331 5.4E-34 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE0207 ad82338da219649a9a67f59f71c1d51a 351 SUPERFAMILY SSF53474 36 329 3.45E-35 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE0207 ad82338da219649a9a67f59f71c1d51a 351 PANTHER PTHR11614 7 338 7.0E-170 T 22-04-2016 YE0207 ad82338da219649a9a67f59f71c1d51a 351 PANTHER PTHR11614:SF100 7 338 7.0E-170 T 22-04-2016 YE0207 ad82338da219649a9a67f59f71c1d51a 351 Pfam PF12146 Serine aminopeptidase, S33 54 314 8.0E-56 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 YE1895 2b72e201f7deef80235e8c8f40b2cafa 714 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 28 547 3.8E-273 T 22-04-2016 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0008152|GO:0031419 YE1895 2b72e201f7deef80235e8c8f40b2cafa 714 Pfam PF01642 Methylmalonyl-CoA mutase 28 539 7.0E-235 T 22-04-2016 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0008152|GO:0016866|GO:0031419 YE1895 2b72e201f7deef80235e8c8f40b2cafa 714 SUPERFAMILY SSF51703 3 542 1.88E-217 T 22-04-2016 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 YE1895 2b72e201f7deef80235e8c8f40b2cafa 714 PANTHER PTHR23408 5 690 0.0 T 22-04-2016 YE1895 2b72e201f7deef80235e8c8f40b2cafa 714 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 583 713 6.8E-62 T 22-04-2016 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 YE1895 2b72e201f7deef80235e8c8f40b2cafa 714 Gene3D G3DSA:3.20.20.240 27 494 7.7E-205 T 22-04-2016 IPR014348 Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain GO:0008152|GO:0016866|GO:0031419 YE1895 2b72e201f7deef80235e8c8f40b2cafa 714 Pfam PF02310 B12 binding domain 586 700 5.9E-16 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 YE1895 2b72e201f7deef80235e8c8f40b2cafa 714 SUPERFAMILY SSF52242 555 713 4.19E-55 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 YE1895 2b72e201f7deef80235e8c8f40b2cafa 714 Gene3D G3DSA:3.40.50.280 553 711 2.8E-66 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 YE1895 2b72e201f7deef80235e8c8f40b2cafa 714 PANTHER PTHR23408:SF1 5 690 0.0 T 22-04-2016 YE1895 2b72e201f7deef80235e8c8f40b2cafa 714 ProSitePatterns PS00544 Methylmalonyl-CoA mutase signature. 370 395 - T 22-04-2016 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0008152|GO:0016866|GO:0031419 YE2151 e4735d895e8873a30ae88637ea735493 200 PANTHER PTHR30055 1 197 9.8E-93 T 22-04-2016 YE2151 e4735d895e8873a30ae88637ea735493 200 Pfam PF16925 Bacterial transcriptional repressor C-terminal 87 188 3.1E-11 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal YE2151 e4735d895e8873a30ae88637ea735493 200 Gene3D G3DSA:1.10.357.10 10 192 2.2E-34 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 YE2151 e4735d895e8873a30ae88637ea735493 200 PANTHER PTHR30055:SF20 1 197 9.8E-93 T 22-04-2016 YE2151 e4735d895e8873a30ae88637ea735493 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 56 2.8E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YE2151 e4735d895e8873a30ae88637ea735493 200 SUPERFAMILY SSF48498 85 196 8.64E-24 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal YE2151 e4735d895e8873a30ae88637ea735493 200 SUPERFAMILY SSF46689 2 76 3.49E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE3777 1c18dc1ed768f3c0400c16603b00f451 642 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 503 633 2.7E-19 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YE3777 1c18dc1ed768f3c0400c16603b00f451 642 ProSitePatterns PS00894 DeoR-type HTH domain signature. 7 40 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 YE3777 1c18dc1ed768f3c0400c16603b00f451 642 SUPERFAMILY SSF63520 297 396 1.96E-23 T 22-04-2016 IPR011608 PRD domain GO:0006355 YE3777 1c18dc1ed768f3c0400c16603b00f451 642 PANTHER PTHR30185:SF5 6 640 4.6E-182 T 22-04-2016 YE3777 1c18dc1ed768f3c0400c16603b00f451 642 Gene3D G3DSA:1.10.10.10 6 65 2.3E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3777 1c18dc1ed768f3c0400c16603b00f451 642 Gene3D G3DSA:1.10.10.10 88 151 1.1E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3777 1c18dc1ed768f3c0400c16603b00f451 642 Gene3D G3DSA:1.10.1790.10 299 396 5.5E-25 T 22-04-2016 IPR011608 PRD domain GO:0006355 YE3777 1c18dc1ed768f3c0400c16603b00f451 642 PANTHER PTHR30185 6 640 4.6E-182 T 22-04-2016 YE3777 1c18dc1ed768f3c0400c16603b00f451 642 Pfam PF08279 HTH domain 17 63 3.6E-7 T 22-04-2016 IPR013196 Helix-turn-helix, type 11 YE3777 1c18dc1ed768f3c0400c16603b00f451 642 SUPERFAMILY SSF52794 406 483 4.81E-9 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 YE3777 1c18dc1ed768f3c0400c16603b00f451 642 Gene3D G3DSA:3.40.930.10 494 634 3.5E-26 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YE3777 1c18dc1ed768f3c0400c16603b00f451 642 SUPERFAMILY SSF55804 495 634 9.59E-26 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 YE3777 1c18dc1ed768f3c0400c16603b00f451 642 Pfam PF00874 PRD domain 305 391 5.5E-21 T 22-04-2016 IPR011608 PRD domain GO:0006355 YE3777 1c18dc1ed768f3c0400c16603b00f451 642 Gene3D G3DSA:3.40.50.270 407 484 6.2E-5 T 22-04-2016 YE3777 1c18dc1ed768f3c0400c16603b00f451 642 Pfam PF05043 Mga helix-turn-helix domain 84 165 3.6E-13 T 22-04-2016 IPR007737 Mga helix-turn-helix domain YE1353 3061c45f6e1df194d1cc1d29f2c031c8 100 PANTHER PTHR11434:SF4 3 100 3.1E-66 T 22-04-2016 YE1353 3061c45f6e1df194d1cc1d29f2c031c8 100 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 8 95 6.9E-22 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 YE1353 3061c45f6e1df194d1cc1d29f2c031c8 100 PANTHER PTHR11434 3 100 3.1E-66 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 YE1353 3061c45f6e1df194d1cc1d29f2c031c8 100 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 100 19.962 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 YE1103 8f03f454a5182fca903eda479f96523d 112 SUPERFAMILY SSF160113 55 109 2.75E-16 T 22-04-2016 IPR010879 Domain of unknown function DUF1508 YE1103 8f03f454a5182fca903eda479f96523d 112 Pfam PF07411 Domain of unknown function (DUF1508) 11 58 7.1E-23 T 22-04-2016 IPR010879 Domain of unknown function DUF1508 YE1103 8f03f454a5182fca903eda479f96523d 112 Pfam PF07411 Domain of unknown function (DUF1508) 63 109 1.3E-20 T 22-04-2016 IPR010879 Domain of unknown function DUF1508 YE1103 8f03f454a5182fca903eda479f96523d 112 Gene3D G3DSA:3.30.160.160 56 101 3.3E-20 T 22-04-2016 IPR010879 Domain of unknown function DUF1508 YE1103 8f03f454a5182fca903eda479f96523d 112 Gene3D G3DSA:3.30.160.160 5 50 1.5E-24 T 22-04-2016 IPR010879 Domain of unknown function DUF1508 YE1103 8f03f454a5182fca903eda479f96523d 112 SUPERFAMILY SSF160113 4 58 3.53E-19 T 22-04-2016 IPR010879 Domain of unknown function DUF1508 YE1103 8f03f454a5182fca903eda479f96523d 112 PANTHER PTHR40606 3 111 1.0E-70 T 22-04-2016 YE1103 8f03f454a5182fca903eda479f96523d 112 PANTHER PTHR40606:SF1 3 111 1.0E-70 T 22-04-2016 YE1147 a714c00098bff3a4b18774acc24624fa 375 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 6 373 1.0E-177 T 22-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 YE1147 a714c00098bff3a4b18774acc24624fa 375 PANTHER PTHR11014:SF106 4 374 4.1E-100 T 22-04-2016 YE1147 a714c00098bff3a4b18774acc24624fa 375 Pfam PF01546 Peptidase family M20/M25/M40 62 371 4.4E-42 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 YE1147 a714c00098bff3a4b18774acc24624fa 375 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 3 375 52.175 T 22-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 YE1147 a714c00098bff3a4b18774acc24624fa 375 Pfam PF07687 Peptidase dimerisation domain 175 282 9.2E-24 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain YE1147 a714c00098bff3a4b18774acc24624fa 375 Gene3D G3DSA:3.40.630.10 5 187 8.7E-73 T 22-04-2016 YE1147 a714c00098bff3a4b18774acc24624fa 375 Gene3D G3DSA:3.40.630.10 316 374 8.7E-73 T 22-04-2016 YE1147 a714c00098bff3a4b18774acc24624fa 375 SUPERFAMILY SSF53187 292 373 1.36E-63 T 22-04-2016 YE1147 a714c00098bff3a4b18774acc24624fa 375 SUPERFAMILY SSF53187 5 178 1.36E-63 T 22-04-2016 YE1147 a714c00098bff3a4b18774acc24624fa 375 Gene3D G3DSA:3.30.70.360 188 288 1.7E-33 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain YE1147 a714c00098bff3a4b18774acc24624fa 375 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 61 70 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 YE1147 a714c00098bff3a4b18774acc24624fa 375 PANTHER PTHR11014 4 374 4.1E-100 T 22-04-2016 YE1147 a714c00098bff3a4b18774acc24624fa 375 SUPERFAMILY SSF55031 179 286 2.99E-28 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain YE3110 96c2a7bd7f9c6aacb39bf29e24b15be5 285 PANTHER PTHR30477:SF3 4 285 2.9E-63 T 22-04-2016 YE3110 96c2a7bd7f9c6aacb39bf29e24b15be5 285 Pfam PF00950 ABC 3 transport family 14 273 1.0E-52 T 22-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 YE3110 96c2a7bd7f9c6aacb39bf29e24b15be5 285 PANTHER PTHR30477 4 285 2.9E-63 T 22-04-2016 YE3110 96c2a7bd7f9c6aacb39bf29e24b15be5 285 SUPERFAMILY SSF81345 12 270 9.81E-22 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YE3006 4c5273fdcf735a3932b35d0f0c63a0b0 87 SUPERFAMILY SSF117991 1 87 3.27E-32 T 22-04-2016 IPR027471 YbeD-like domain YE3006 4c5273fdcf735a3932b35d0f0c63a0b0 87 Pfam PF04359 Protein of unknown function (DUF493) 7 87 4.5E-30 T 22-04-2016 IPR007454 Uncharacterised protein family UPF0250 YE3006 4c5273fdcf735a3932b35d0f0c63a0b0 87 PANTHER PTHR38036:SF1 1 87 3.1E-43 T 22-04-2016 YE3006 4c5273fdcf735a3932b35d0f0c63a0b0 87 Gene3D G3DSA:3.30.70.1460 1 87 1.4E-37 T 22-04-2016 IPR027471 YbeD-like domain YE3006 4c5273fdcf735a3932b35d0f0c63a0b0 87 PANTHER PTHR38036 1 87 3.1E-43 T 22-04-2016 YE3006 4c5273fdcf735a3932b35d0f0c63a0b0 87 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 1 87 26.829 T 22-04-2016 IPR007454 Uncharacterised protein family UPF0250 YE0026 5ee12fdf59ef0c5bf3eacc9f0ee3d2ee 349 SMART SM00091 7 75 2.9E-6 T 22-04-2016 IPR000014 PAS domain YE0026 5ee12fdf59ef0c5bf3eacc9f0ee3d2ee 349 SUPERFAMILY SSF55874 198 346 4.32E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE0026 5ee12fdf59ef0c5bf3eacc9f0ee3d2ee 349 Gene3D G3DSA:3.30.565.10 198 348 1.2E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE0026 5ee12fdf59ef0c5bf3eacc9f0ee3d2ee 349 PANTHER PTHR24423 11 349 6.8E-181 T 22-04-2016 YE0026 5ee12fdf59ef0c5bf3eacc9f0ee3d2ee 349 Pfam PF00989 PAS fold 11 98 2.6E-6 T 22-04-2016 IPR013767 PAS fold GO:0006355 YE0026 5ee12fdf59ef0c5bf3eacc9f0ee3d2ee 349 SMART SM00388 129 194 1.6E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE0026 5ee12fdf59ef0c5bf3eacc9f0ee3d2ee 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 310 328 2.6E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE0026 5ee12fdf59ef0c5bf3eacc9f0ee3d2ee 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 333 346 2.6E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE0026 5ee12fdf59ef0c5bf3eacc9f0ee3d2ee 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 281 295 2.6E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE0026 5ee12fdf59ef0c5bf3eacc9f0ee3d2ee 349 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 347 1.0E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE0026 5ee12fdf59ef0c5bf3eacc9f0ee3d2ee 349 Pfam PF00512 His Kinase A (phospho-acceptor) domain 131 190 3.2E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE0026 5ee12fdf59ef0c5bf3eacc9f0ee3d2ee 349 PANTHER PTHR24423:SF488 11 349 6.8E-181 T 22-04-2016 YE0026 5ee12fdf59ef0c5bf3eacc9f0ee3d2ee 349 SUPERFAMILY SSF47384 121 190 1.28E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE0026 5ee12fdf59ef0c5bf3eacc9f0ee3d2ee 349 Gene3D G3DSA:1.10.287.130 129 186 1.6E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE0026 5ee12fdf59ef0c5bf3eacc9f0ee3d2ee 349 SMART SM00387 233 349 1.4E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE0026 5ee12fdf59ef0c5bf3eacc9f0ee3d2ee 349 SUPERFAMILY SSF55785 11 97 4.67E-6 T 22-04-2016 IPR000014 PAS domain YE0026 5ee12fdf59ef0c5bf3eacc9f0ee3d2ee 349 Gene3D G3DSA:3.30.450.20 11 99 6.2E-20 T 22-04-2016 YE3188 8c5394a3cb104f73155683d4b21a0814 174 ProSitePatterns PS01128 Shikimate kinase signature. 58 82 - T 22-04-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 YE3188 8c5394a3cb104f73155683d4b21a0814 174 Hamap MF_00109 Shikimate kinase [aroK]. 2 169 26.077 T 22-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 YE3188 8c5394a3cb104f73155683d4b21a0814 174 Gene3D G3DSA:3.40.50.300 2 169 1.2E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3188 8c5394a3cb104f73155683d4b21a0814 174 PRINTS PR01100 Shikimate kinase family signature 95 112 2.9E-22 T 22-04-2016 YE3188 8c5394a3cb104f73155683d4b21a0814 174 PRINTS PR01100 Shikimate kinase family signature 29 42 2.9E-22 T 22-04-2016 YE3188 8c5394a3cb104f73155683d4b21a0814 174 PRINTS PR01100 Shikimate kinase family signature 57 65 2.9E-22 T 22-04-2016 YE3188 8c5394a3cb104f73155683d4b21a0814 174 PRINTS PR01100 Shikimate kinase family signature 5 20 2.9E-22 T 22-04-2016 YE3188 8c5394a3cb104f73155683d4b21a0814 174 PRINTS PR01100 Shikimate kinase family signature 74 83 2.9E-22 T 22-04-2016 YE3188 8c5394a3cb104f73155683d4b21a0814 174 PANTHER PTHR21087:SF9 1 173 3.1E-103 T 22-04-2016 YE3188 8c5394a3cb104f73155683d4b21a0814 174 Pfam PF01202 Shikimate kinase 11 167 2.8E-49 T 22-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 YE3188 8c5394a3cb104f73155683d4b21a0814 174 PANTHER PTHR21087 1 173 3.1E-103 T 22-04-2016 YE3188 8c5394a3cb104f73155683d4b21a0814 174 Hamap MF_01269 Shikimate kinase 2 [aroL]. 1 173 43.488 T 22-04-2016 IPR027544 Shikimate kinase 2 GO:0004765|GO:0009073 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 YE3188 8c5394a3cb104f73155683d4b21a0814 174 SUPERFAMILY SSF52540 3 168 4.51E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0775 409ac930f5381d1f652838174d32e241 332 Gene3D G3DSA:1.10.10.10 259 324 2.3E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0775 409ac930f5381d1f652838174d32e241 332 Pfam PF04545 Sigma-70, region 4 264 317 1.8E-15 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE0775 409ac930f5381d1f652838174d32e241 332 PANTHER PTHR30603 13 331 6.4E-210 T 22-04-2016 YE0775 409ac930f5381d1f652838174d32e241 332 SUPERFAMILY SSF88659 227 324 1.55E-23 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE0775 409ac930f5381d1f652838174d32e241 332 PANTHER PTHR30603:SF15 13 331 6.4E-210 T 22-04-2016 YE0775 409ac930f5381d1f652838174d32e241 332 Gene3D G3DSA:1.10.601.10 52 165 3.2E-54 T 22-04-2016 YE0775 409ac930f5381d1f652838174d32e241 332 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 289 315 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE0775 409ac930f5381d1f652838174d32e241 332 SUPERFAMILY SSF88946 58 166 1.96E-45 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE0775 409ac930f5381d1f652838174d32e241 332 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 50 330 5.0E-144 T 22-04-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE0775 409ac930f5381d1f652838174d32e241 332 SUPERFAMILY SSF88659 169 243 8.72E-15 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE0775 409ac930f5381d1f652838174d32e241 332 Pfam PF04539 Sigma-70 region 3 176 250 2.5E-20 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE0775 409ac930f5381d1f652838174d32e241 332 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 93 319 4.2E-35 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE0775 409ac930f5381d1f652838174d32e241 332 Pfam PF04542 Sigma-70 region 2 96 165 2.9E-21 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE0775 409ac930f5381d1f652838174d32e241 332 PRINTS PR00046 Major sigma-70 factor signature 144 152 2.5E-27 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE0775 409ac930f5381d1f652838174d32e241 332 PRINTS PR00046 Major sigma-70 factor signature 268 280 2.5E-27 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE0775 409ac930f5381d1f652838174d32e241 332 PRINTS PR00046 Major sigma-70 factor signature 304 315 2.5E-27 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE0775 409ac930f5381d1f652838174d32e241 332 PRINTS PR00046 Major sigma-70 factor signature 120 133 2.5E-27 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE0775 409ac930f5381d1f652838174d32e241 332 PRINTS PR00046 Major sigma-70 factor signature 289 304 2.5E-27 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE0775 409ac930f5381d1f652838174d32e241 332 Gene3D G3DSA:1.10.10.10 169 218 2.3E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0775 409ac930f5381d1f652838174d32e241 332 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 12 330 39.918 T 22-04-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE0775 409ac930f5381d1f652838174d32e241 332 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 120 133 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE0775 409ac930f5381d1f652838174d32e241 332 Pfam PF00140 Sigma-70 factor, region 1.2 58 89 5.2E-11 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE4035 98482e01254099972af609b937d062fa 196 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 29 196 1.7E-59 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 YE4035 98482e01254099972af609b937d062fa 196 PANTHER PTHR30069 3 196 1.2E-61 T 22-04-2016 YE4035 98482e01254099972af609b937d062fa 196 PIRSF PIRSF015617 1 196 1.4E-66 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 YE4035 98482e01254099972af609b937d062fa 196 Gene3D G3DSA:3.40.50.300 3 196 5.1E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE4035 98482e01254099972af609b937d062fa 196 SUPERFAMILY SSF52540 7 196 2.66E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE4035 98482e01254099972af609b937d062fa 196 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 27 196 9.2E-74 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 YE0564 89078446cefec05c3573f7c9025b27d2 529 Gene3D G3DSA:3.30.70.870 395 463 6.5E-13 T 22-04-2016 YE0564 89078446cefec05c3573f7c9025b27d2 529 PANTHER PTHR23115:SF69 1 184 8.4E-253 T 22-04-2016 YE0564 89078446cefec05c3573f7c9025b27d2 529 PANTHER PTHR23115:SF69 251 472 8.4E-253 T 22-04-2016 YE0564 89078446cefec05c3573f7c9025b27d2 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 6 529 0.0 T 22-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 YE0564 89078446cefec05c3573f7c9025b27d2 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 52.19 T 22-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 YE0564 89078446cefec05c3573f7c9025b27d2 529 SUPERFAMILY SSF54980 393 468 8.27E-17 T 22-04-2016 IPR009022 Elongation factor G, III-V domain YE0564 89078446cefec05c3573f7c9025b27d2 529 PRINTS PR00315 GTP-binding elongation factor signature 101 112 6.6E-11 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YE0564 89078446cefec05c3573f7c9025b27d2 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 6.6E-11 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YE0564 89078446cefec05c3573f7c9025b27d2 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 6.6E-11 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YE0564 89078446cefec05c3573f7c9025b27d2 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 6.6E-11 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YE0564 89078446cefec05c3573f7c9025b27d2 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 6.6E-11 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YE0564 89078446cefec05c3573f7c9025b27d2 529 Pfam PF00009 Elongation factor Tu GTP binding domain 13 277 6.8E-46 T 22-04-2016 YE0564 89078446cefec05c3573f7c9025b27d2 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 9.4E-47 T 22-04-2016 IPR032090 Peptide chain release factor 3, C-terminal YE0564 89078446cefec05c3573f7c9025b27d2 529 Gene3D G3DSA:3.40.50.300 11 283 1.2E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0564 89078446cefec05c3573f7c9025b27d2 529 PANTHER PTHR23115 1 184 8.4E-253 T 22-04-2016 YE0564 89078446cefec05c3573f7c9025b27d2 529 PANTHER PTHR23115 251 472 8.4E-253 T 22-04-2016 YE0564 89078446cefec05c3573f7c9025b27d2 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 9.6E-12 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 YE0564 89078446cefec05c3573f7c9025b27d2 529 Gene3D G3DSA:2.40.30.10 293 394 5.1E-25 T 22-04-2016 YE0564 89078446cefec05c3573f7c9025b27d2 529 SUPERFAMILY SSF50447 262 393 3.31E-29 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain YE0564 89078446cefec05c3573f7c9025b27d2 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site YE0564 89078446cefec05c3573f7c9025b27d2 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 15 158 3.2E-18 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 YE0564 89078446cefec05c3573f7c9025b27d2 529 SUPERFAMILY SSF52540 10 277 9.48E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1951 94777347038d4fd12784290283035657 222 Gene3D G3DSA:1.10.10.60 16 60 3.0E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE1951 94777347038d4fd12784290283035657 222 SUPERFAMILY SSF46689 16 96 2.1E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE1951 94777347038d4fd12784290283035657 222 PANTHER PTHR30055:SF53 12 180 4.1E-53 T 22-04-2016 YE1951 94777347038d4fd12784290283035657 222 SUPERFAMILY SSF48498 93 217 9.89E-40 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal YE1951 94777347038d4fd12784290283035657 222 PANTHER PTHR30055 12 180 4.1E-53 T 22-04-2016 YE1951 94777347038d4fd12784290283035657 222 Pfam PF08362 YcdC-like protein, C-terminal region 76 216 4.5E-55 T 22-04-2016 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 YE1951 94777347038d4fd12784290283035657 222 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 50 73 1.8E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YE1951 94777347038d4fd12784290283035657 222 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 42 1.8E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YE1951 94777347038d4fd12784290283035657 222 Gene3D G3DSA:1.10.10.60 61 84 7.7E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE1951 94777347038d4fd12784290283035657 222 Pfam PF00440 Bacterial regulatory proteins, tetR family 29 75 9.2E-16 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YE1951 94777347038d4fd12784290283035657 222 Gene3D G3DSA:1.10.357.10 85 216 1.1E-56 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 YE1069 0a9febd1295939cc7e647e94a0c78d22 141 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 22-04-2016 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YE1069 0a9febd1295939cc7e647e94a0c78d22 141 Pfam PF00334 Nucleoside diphosphate kinase 4 138 5.6E-57 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YE1069 0a9febd1295939cc7e647e94a0c78d22 141 PANTHER PTHR11349 1 140 8.0E-78 T 22-04-2016 YE1069 0a9febd1295939cc7e647e94a0c78d22 141 SMART SM00562 3 140 7.5E-88 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YE1069 0a9febd1295939cc7e647e94a0c78d22 141 SUPERFAMILY SSF54919 1 140 4.58E-60 T 22-04-2016 YE1069 0a9febd1295939cc7e647e94a0c78d22 141 Gene3D G3DSA:3.30.70.141 1 139 4.4E-61 T 22-04-2016 YE1069 0a9febd1295939cc7e647e94a0c78d22 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 7.2E-40 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YE1069 0a9febd1295939cc7e647e94a0c78d22 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 7.2E-40 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YE1069 0a9febd1295939cc7e647e94a0c78d22 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 7.2E-40 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YE1069 0a9febd1295939cc7e647e94a0c78d22 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 7.2E-40 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YE1069 0a9febd1295939cc7e647e94a0c78d22 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 7.2E-40 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YE1069 0a9febd1295939cc7e647e94a0c78d22 141 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 35.852 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YE1540 4570ae43d49be061c1037362266f69ae 557 Pfam PF00575 S1 RNA binding domain 103 171 6.7E-10 T 22-04-2016 IPR003029 S1 domain GO:0003676 YE1540 4570ae43d49be061c1037362266f69ae 557 Pfam PF00575 S1 RNA binding domain 449 520 4.2E-16 T 22-04-2016 IPR003029 S1 domain GO:0003676 YE1540 4570ae43d49be061c1037362266f69ae 557 Pfam PF00575 S1 RNA binding domain 279 347 2.7E-19 T 22-04-2016 IPR003029 S1 domain GO:0003676 YE1540 4570ae43d49be061c1037362266f69ae 557 Pfam PF00575 S1 RNA binding domain 20 78 6.6E-7 T 22-04-2016 IPR003029 S1 domain GO:0003676 YE1540 4570ae43d49be061c1037362266f69ae 557 Pfam PF00575 S1 RNA binding domain 361 434 3.2E-21 T 22-04-2016 IPR003029 S1 domain GO:0003676 YE1540 4570ae43d49be061c1037362266f69ae 557 Pfam PF00575 S1 RNA binding domain 190 260 2.4E-21 T 22-04-2016 IPR003029 S1 domain GO:0003676 YE1540 4570ae43d49be061c1037362266f69ae 557 SUPERFAMILY SSF50249 104 185 4.25E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE1540 4570ae43d49be061c1037362266f69ae 557 SMART SM00316 190 260 2.8E-28 T 22-04-2016 IPR022967 RNA-binding domain, S1 YE1540 4570ae43d49be061c1037362266f69ae 557 SMART SM00316 19 87 5.0E-5 T 22-04-2016 IPR022967 RNA-binding domain, S1 YE1540 4570ae43d49be061c1037362266f69ae 557 SMART SM00316 449 520 2.0E-21 T 22-04-2016 IPR022967 RNA-binding domain, S1 YE1540 4570ae43d49be061c1037362266f69ae 557 SMART SM00316 362 434 1.8E-20 T 22-04-2016 IPR022967 RNA-binding domain, S1 YE1540 4570ae43d49be061c1037362266f69ae 557 SMART SM00316 275 347 6.5E-26 T 22-04-2016 IPR022967 RNA-binding domain, S1 YE1540 4570ae43d49be061c1037362266f69ae 557 SMART SM00316 103 171 8.1E-9 T 22-04-2016 IPR022967 RNA-binding domain, S1 YE1540 4570ae43d49be061c1037362266f69ae 557 SUPERFAMILY SSF50249 363 444 4.77E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE1540 4570ae43d49be061c1037362266f69ae 557 PRINTS PR00681 Ribosomal protein S1 signature 126 143 6.7E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 YE1540 4570ae43d49be061c1037362266f69ae 557 PRINTS PR00681 Ribosomal protein S1 signature 108 124 6.7E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 YE1540 4570ae43d49be061c1037362266f69ae 557 PRINTS PR00681 Ribosomal protein S1 signature 155 175 6.7E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 YE1540 4570ae43d49be061c1037362266f69ae 557 PRINTS PR00681 Ribosomal protein S1 signature 21 39 6.7E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 YE1540 4570ae43d49be061c1037362266f69ae 557 PRINTS PR00681 Ribosomal protein S1 signature 290 309 6.7E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 YE1540 4570ae43d49be061c1037362266f69ae 557 PRINTS PR00681 Ribosomal protein S1 signature 330 348 6.7E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 YE1540 4570ae43d49be061c1037362266f69ae 557 PRINTS PR00681 Ribosomal protein S1 signature 39 53 6.7E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 YE1540 4570ae43d49be061c1037362266f69ae 557 PRINTS PR00681 Ribosomal protein S1 signature 84 103 6.7E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 YE1540 4570ae43d49be061c1037362266f69ae 557 PRINTS PR00681 Ribosomal protein S1 signature 212 233 6.7E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 YE1540 4570ae43d49be061c1037362266f69ae 557 Gene3D G3DSA:2.40.50.140 21 101 8.6E-11 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE1540 4570ae43d49be061c1037362266f69ae 557 Gene3D G3DSA:2.40.50.140 192 279 9.3E-31 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE1540 4570ae43d49be061c1037362266f69ae 557 Gene3D G3DSA:2.40.50.140 280 362 4.1E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE1540 4570ae43d49be061c1037362266f69ae 557 SUPERFAMILY SSF50249 189 275 7.46E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE1540 4570ae43d49be061c1037362266f69ae 557 Gene3D G3DSA:2.40.50.140 363 443 6.4E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE1540 4570ae43d49be061c1037362266f69ae 557 Gene3D G3DSA:2.40.50.140 102 172 3.9E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE1540 4570ae43d49be061c1037362266f69ae 557 Gene3D G3DSA:2.40.50.140 444 521 1.9E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE1540 4570ae43d49be061c1037362266f69ae 557 SUPERFAMILY SSF50249 255 371 8.24E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE1540 4570ae43d49be061c1037362266f69ae 557 PIRSF PIRSF002111 1 534 2.1E-217 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 YE1540 4570ae43d49be061c1037362266f69ae 557 SUPERFAMILY SSF50249 429 535 4.62E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE1540 4570ae43d49be061c1037362266f69ae 557 SUPERFAMILY SSF50249 1 112 4.91E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE1540 4570ae43d49be061c1037362266f69ae 557 PANTHER PTHR10724 1 514 3.3E-279 T 22-04-2016 YE1540 4570ae43d49be061c1037362266f69ae 557 PANTHER PTHR10724:SF6 1 514 3.3E-279 T 22-04-2016 YE1540 4570ae43d49be061c1037362266f69ae 557 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 2.3E-236 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 YE3098 7f7d27e5c7926539961e3f0929464af1 121 SUPERFAMILY SSF75169 7 121 1.24E-30 T 22-04-2016 IPR027396 DsrEFH-like YE3098 7f7d27e5c7926539961e3f0929464af1 121 Gene3D G3DSA:3.40.1260.10 7 121 6.2E-40 T 22-04-2016 IPR027396 DsrEFH-like YE3098 7f7d27e5c7926539961e3f0929464af1 121 PANTHER PTHR34874 6 121 2.2E-74 T 22-04-2016 YE3098 7f7d27e5c7926539961e3f0929464af1 121 PANTHER PTHR34874:SF2 6 121 2.2E-74 T 22-04-2016 YE3098 7f7d27e5c7926539961e3f0929464af1 121 Pfam PF02635 DsrE/DsrF-like family 8 121 1.0E-19 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein YE1447 ce22bfddd9c3e4906d4cdcdfcfe59af5 377 Gene3D G3DSA:3.40.930.10 4 141 2.1E-39 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YE1447 ce22bfddd9c3e4906d4cdcdfcfe59af5 377 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 297 304 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site YE1447 ce22bfddd9c3e4906d4cdcdfcfe59af5 377 SUPERFAMILY SSF55804 148 276 3.31E-13 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 YE1447 ce22bfddd9c3e4906d4cdcdfcfe59af5 377 SUPERFAMILY SSF55594 286 374 1.83E-23 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YE1447 ce22bfddd9c3e4906d4cdcdfcfe59af5 377 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 139 2.5E-29 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YE1447 ce22bfddd9c3e4906d4cdcdfcfe59af5 377 PRINTS PR00107 Phosphocarrier protein signature 325 340 8.8E-18 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YE1447 ce22bfddd9c3e4906d4cdcdfcfe59af5 377 PRINTS PR00107 Phosphocarrier protein signature 297 313 8.8E-18 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YE1447 ce22bfddd9c3e4906d4cdcdfcfe59af5 377 PRINTS PR00107 Phosphocarrier protein signature 340 357 8.8E-18 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YE1447 ce22bfddd9c3e4906d4cdcdfcfe59af5 377 Gene3D G3DSA:3.30.1340.10 287 374 7.0E-30 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YE1447 ce22bfddd9c3e4906d4cdcdfcfe59af5 377 Gene3D G3DSA:3.40.930.10 150 278 7.1E-8 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YE1447 ce22bfddd9c3e4906d4cdcdfcfe59af5 377 PANTHER PTHR30181 2 377 2.5E-187 T 22-04-2016 YE1447 ce22bfddd9c3e4906d4cdcdfcfe59af5 377 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 286 368 4.1E-22 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YE1447 ce22bfddd9c3e4906d4cdcdfcfe59af5 377 SUPERFAMILY SSF55804 2 140 3.79E-38 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 YE1447 ce22bfddd9c3e4906d4cdcdfcfe59af5 377 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 326 341 - T 22-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site YE1447 ce22bfddd9c3e4906d4cdcdfcfe59af5 377 PANTHER PTHR30181:SF3 2 377 2.5E-187 T 22-04-2016 YE1447 ce22bfddd9c3e4906d4cdcdfcfe59af5 377 Pfam PF00381 PTS HPr component phosphorylation site 287 368 8.1E-23 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YE1447 ce22bfddd9c3e4906d4cdcdfcfe59af5 377 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YE3332 5f722a6c6a6cf20b4e81f4410c695ef1 420 SUPERFAMILY SSF51419 25 277 6.54E-56 T 22-04-2016 IPR029066 PLP-binding barrel YE3332 5f722a6c6a6cf20b4e81f4410c695ef1 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 182 195 5.4E-20 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 YE3332 5f722a6c6a6cf20b4e81f4410c695ef1 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 376 389 5.4E-20 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 YE3332 5f722a6c6a6cf20b4e81f4410c695ef1 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 265 284 5.4E-20 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 YE3332 5f722a6c6a6cf20b4e81f4410c695ef1 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 71 83 5.4E-20 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 YE3332 5f722a6c6a6cf20b4e81f4410c695ef1 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 51 69 5.4E-20 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 YE3332 5f722a6c6a6cf20b4e81f4410c695ef1 420 SUPERFAMILY SSF50621 251 419 2.51E-57 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 YE3332 5f722a6c6a6cf20b4e81f4410c695ef1 420 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 280 395 8.7E-17 T 22-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 YE3332 5f722a6c6a6cf20b4e81f4410c695ef1 420 Gene3D G3DSA:3.20.20.10 48 263 1.3E-62 T 22-04-2016 IPR029066 PLP-binding barrel YE3332 5f722a6c6a6cf20b4e81f4410c695ef1 420 PANTHER PTHR11482:SF5 16 418 2.5E-147 T 22-04-2016 YE3332 5f722a6c6a6cf20b4e81f4410c695ef1 420 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 51 69 - T 22-04-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 YE3332 5f722a6c6a6cf20b4e81f4410c695ef1 420 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 14 419 38.396 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YE3332 5f722a6c6a6cf20b4e81f4410c695ef1 420 PANTHER PTHR11482 16 418 2.5E-147 T 22-04-2016 YE3332 5f722a6c6a6cf20b4e81f4410c695ef1 420 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 7 418 5.7E-129 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YE3332 5f722a6c6a6cf20b4e81f4410c695ef1 420 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 214 229 - T 22-04-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 YE3332 5f722a6c6a6cf20b4e81f4410c695ef1 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 69 86 2.8E-26 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YE3332 5f722a6c6a6cf20b4e81f4410c695ef1 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 386 408 2.8E-26 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YE3332 5f722a6c6a6cf20b4e81f4410c695ef1 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 293 311 2.8E-26 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YE3332 5f722a6c6a6cf20b4e81f4410c695ef1 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 157 166 2.8E-26 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YE3332 5f722a6c6a6cf20b4e81f4410c695ef1 420 Gene3D G3DSA:2.40.37.10 264 419 3.4E-56 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 YE3332 5f722a6c6a6cf20b4e81f4410c695ef1 420 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 49 275 9.4E-57 T 22-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 YE2559 00d0ab41a1c4ce4f8624027cdb694125 134 Pfam PF00460 Flagella basal body rod protein 7 37 3.3E-9 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 YE2559 00d0ab41a1c4ce4f8624027cdb694125 134 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 134 5.4E-50 T 22-04-2016 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 YE2559 00d0ab41a1c4ce4f8624027cdb694125 134 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site YE2559 00d0ab41a1c4ce4f8624027cdb694125 134 PANTHER PTHR30435 1 134 1.2E-66 T 22-04-2016 YE2559 00d0ab41a1c4ce4f8624027cdb694125 134 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 87 131 1.1E-10 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YE2559 00d0ab41a1c4ce4f8624027cdb694125 134 PANTHER PTHR30435:SF2 1 134 1.2E-66 T 22-04-2016 YE2105 fd2f1eaaae6aec3bcfb91d889c7d2038 277 SUPERFAMILY SSF63520 171 272 6.02E-26 T 22-04-2016 IPR011608 PRD domain GO:0006355 YE2105 fd2f1eaaae6aec3bcfb91d889c7d2038 277 SUPERFAMILY SSF50151 1 53 1.06E-16 T 22-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 YE2105 fd2f1eaaae6aec3bcfb91d889c7d2038 277 Pfam PF00874 PRD domain 76 162 2.7E-21 T 22-04-2016 IPR011608 PRD domain GO:0006355 YE2105 fd2f1eaaae6aec3bcfb91d889c7d2038 277 Pfam PF00874 PRD domain 180 271 9.0E-20 T 22-04-2016 IPR011608 PRD domain GO:0006355 YE2105 fd2f1eaaae6aec3bcfb91d889c7d2038 277 Pfam PF03123 CAT RNA binding domain 1 54 1.2E-21 T 22-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 YE2105 fd2f1eaaae6aec3bcfb91d889c7d2038 277 Gene3D G3DSA:1.10.1790.10 171 273 1.3E-29 T 22-04-2016 IPR011608 PRD domain GO:0006355 YE2105 fd2f1eaaae6aec3bcfb91d889c7d2038 277 PANTHER PTHR30185 1 274 1.1E-106 T 22-04-2016 YE2105 fd2f1eaaae6aec3bcfb91d889c7d2038 277 SUPERFAMILY SSF63520 61 166 3.4E-26 T 22-04-2016 IPR011608 PRD domain GO:0006355 YE2105 fd2f1eaaae6aec3bcfb91d889c7d2038 277 PANTHER PTHR30185:SF2 1 274 1.1E-106 T 22-04-2016 YE2105 fd2f1eaaae6aec3bcfb91d889c7d2038 277 Gene3D G3DSA:1.10.1790.10 66 165 2.1E-26 T 22-04-2016 IPR011608 PRD domain GO:0006355 YE2105 fd2f1eaaae6aec3bcfb91d889c7d2038 277 Gene3D G3DSA:2.30.24.10 1 53 5.0E-22 T 22-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 YE2105 fd2f1eaaae6aec3bcfb91d889c7d2038 277 SMART SM01061 1 59 7.9E-27 T 22-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 YE2528 f202edd0297910750e1405fca6bd5d97 984 SUPERFAMILY SSF55781 438 588 2.42E-7 T 22-04-2016 IPR029016 GAF domain-like YE2528 f202edd0297910750e1405fca6bd5d97 984 SUPERFAMILY SSF109604 600 682 2.67E-8 T 22-04-2016 YE2528 f202edd0297910750e1405fca6bd5d97 984 SMART SM00471 604 914 1.6E-4 T 22-04-2016 IPR003607 HD/PDEase domain YE2528 f202edd0297910750e1405fca6bd5d97 984 Gene3D G3DSA:3.30.450.20 224 348 2.6E-6 T 22-04-2016 YE2528 f202edd0297910750e1405fca6bd5d97 984 Gene3D G3DSA:3.30.450.40 417 589 9.6E-5 T 22-04-2016 IPR029016 GAF domain-like YE2528 f202edd0297910750e1405fca6bd5d97 984 Pfam PF13487 HD domain 831 896 1.2E-20 T 22-04-2016 YE2528 f202edd0297910750e1405fca6bd5d97 984 Pfam PF02743 Cache domain 49 332 1.5E-12 T 22-04-2016 IPR033479 Double Cache domain 1 YE2528 f202edd0297910750e1405fca6bd5d97 984 Gene3D G3DSA:1.10.3210.10 594 674 9.6E-5 T 22-04-2016 IPR006674 HD domain YE2528 f202edd0297910750e1405fca6bd5d97 984 Gene3D G3DSA:3.30.450.20 86 223 1.3E-14 T 22-04-2016 YE2528 f202edd0297910750e1405fca6bd5d97 984 SUPERFAMILY SSF109604 833 939 1.7E-6 T 22-04-2016 YE0375 aa5e3aea9543aa36264e398b8bd05916 635 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 310 2.6E-102 T 22-04-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 YE0375 aa5e3aea9543aa36264e398b8bd05916 635 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 120 4.4E-11 T 22-04-2016 YE0375 aa5e3aea9543aa36264e398b8bd05916 635 Gene3D G3DSA:3.30.565.10 2 207 2.7E-75 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE0375 aa5e3aea9543aa36264e398b8bd05916 635 SUPERFAMILY SSF54211 191 330 1.9E-38 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YE0375 aa5e3aea9543aa36264e398b8bd05916 635 SUPERFAMILY SSF118116 453 631 2.75E-43 T 22-04-2016 YE0375 aa5e3aea9543aa36264e398b8bd05916 635 Pfam PF08676 MutL C terminal dimerisation domain 455 584 4.0E-27 T 22-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 YE0375 aa5e3aea9543aa36264e398b8bd05916 635 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 213 329 3.6E-39 T 22-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 YE0375 aa5e3aea9543aa36264e398b8bd05916 635 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 632 26.11 T 22-04-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 YE0375 aa5e3aea9543aa36264e398b8bd05916 635 PANTHER PTHR10073 3 371 4.7E-162 T 22-04-2016 YE0375 aa5e3aea9543aa36264e398b8bd05916 635 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 22-04-2016 IPR014762 DNA mismatch repair, conserved site YE0375 aa5e3aea9543aa36264e398b8bd05916 635 Gene3D G3DSA:3.30.230.10 218 329 1.3E-39 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YE0375 aa5e3aea9543aa36264e398b8bd05916 635 SMART SM00853 458 593 8.0E-15 T 22-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 YE0375 aa5e3aea9543aa36264e398b8bd05916 635 SUPERFAMILY SSF55874 1 204 1.2E-55 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE0375 aa5e3aea9543aa36264e398b8bd05916 635 SMART SM01340 212 330 5.1E-59 T 22-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 YE2220 9b3abff6f85bea4b5c6d4ffc05b78e75 180 Pfam PF04279 Intracellular septation protein A 1 175 1.7E-71 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 YE2220 9b3abff6f85bea4b5c6d4ffc05b78e75 180 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 178 8.3E-71 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 YE2220 9b3abff6f85bea4b5c6d4ffc05b78e75 180 PANTHER PTHR36917:SF1 1 180 3.9E-83 T 22-04-2016 YE2220 9b3abff6f85bea4b5c6d4ffc05b78e75 180 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 176 19.622 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 YE2220 9b3abff6f85bea4b5c6d4ffc05b78e75 180 PANTHER PTHR36917 1 180 3.9E-83 T 22-04-2016 YE1325 c6dc70a3a19d86ddb3bd325759f9333a 184 SUPERFAMILY SSF56300 1 163 1.82E-37 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like YE1325 c6dc70a3a19d86ddb3bd325759f9333a 184 Gene3D G3DSA:3.60.21.10 1 166 1.9E-46 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like YE1325 c6dc70a3a19d86ddb3bd325759f9333a 184 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 161 3.9E-24 T 22-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type YE1325 c6dc70a3a19d86ddb3bd325759f9333a 184 PANTHER PTHR11124 1 161 6.4E-65 T 22-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 YE1325 c6dc70a3a19d86ddb3bd325759f9333a 184 ProSitePatterns PS01269 Uncharacterized protein family UPF0025 signature. 120 144 - T 22-04-2016 IPR020935 Phosphodiesterase YfcE, conserved site KEGG: 00564+3.1.4.-|KEGG: 00565+3.1.4.- YE1325 c6dc70a3a19d86ddb3bd325759f9333a 184 PANTHER PTHR11124:SF14 1 161 6.4E-65 T 22-04-2016 YE1325 c6dc70a3a19d86ddb3bd325759f9333a 184 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 1 166 6.4E-39 T 22-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 YE0404 0ead3dfba989ace96cbbf9f99873fa59 212 PANTHER PTHR10173:SF36 6 204 4.5E-99 T 22-04-2016 YE0404 0ead3dfba989ace96cbbf9f99873fa59 212 Pfam PF01625 Peptide methionine sulfoxide reductase 46 199 3.1E-64 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 YE0404 0ead3dfba989ace96cbbf9f99873fa59 212 Gene3D G3DSA:3.30.1060.10 8 199 1.2E-76 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 YE0404 0ead3dfba989ace96cbbf9f99873fa59 212 SUPERFAMILY SSF55068 6 208 1.44E-81 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 YE0404 0ead3dfba989ace96cbbf9f99873fa59 212 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 44 199 1.1E-65 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 YE0404 0ead3dfba989ace96cbbf9f99873fa59 212 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 43 205 37.973 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 YE0404 0ead3dfba989ace96cbbf9f99873fa59 212 PANTHER PTHR10173 6 204 4.5E-99 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 YE2005 8f92bdd540b393f40a2e39249d529dfa 302 PANTHER PTHR32196:SF37 1 302 8.1E-237 T 22-04-2016 YE2005 8f92bdd540b393f40a2e39249d529dfa 302 PANTHER PTHR32196 1 302 8.1E-237 T 22-04-2016 YE2005 8f92bdd540b393f40a2e39249d529dfa 302 Pfam PF02653 Branched-chain amino acid transport system / permease component 32 289 7.7E-44 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YE1897 553aa757f1fa847bed6690467c978c2e 295 PANTHER PTHR30477 5 271 1.1E-188 T 22-04-2016 YE1897 553aa757f1fa847bed6690467c978c2e 295 SUPERFAMILY SSF81345 5 266 2.62E-45 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YE1897 553aa757f1fa847bed6690467c978c2e 295 Pfam PF00950 ABC 3 transport family 14 268 1.0E-97 T 22-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 YE1897 553aa757f1fa847bed6690467c978c2e 295 PANTHER PTHR30477:SF9 5 271 1.1E-188 T 22-04-2016 YE1897 553aa757f1fa847bed6690467c978c2e 295 Gene3D G3DSA:1.10.3470.10 57 267 1.7E-11 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YE3161 bb4c3f812a0bf2877f37308597016515 369 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 147 366 4.7E-74 T 22-04-2016 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 YE3161 bb4c3f812a0bf2877f37308597016515 369 PANTHER PTHR11079:SF10 1 233 4.7E-69 T 22-04-2016 YE3161 bb4c3f812a0bf2877f37308597016515 369 PIRSF PIRSF006769 1 368 8.9E-131 T 22-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 YE3161 bb4c3f812a0bf2877f37308597016515 369 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 8 362 1.0E-144 T 22-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 YE3161 bb4c3f812a0bf2877f37308597016515 369 Gene3D G3DSA:3.40.430.10 131 363 1.1E-69 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain YE3161 bb4c3f812a0bf2877f37308597016515 369 PANTHER PTHR11079 1 233 4.7E-69 T 22-04-2016 YE3161 bb4c3f812a0bf2877f37308597016515 369 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 51 89 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 YE3161 bb4c3f812a0bf2877f37308597016515 369 Gene3D G3DSA:3.40.140.10 4 130 3.1E-35 T 22-04-2016 YE3161 bb4c3f812a0bf2877f37308597016515 369 SUPERFAMILY SSF53597 145 363 1.54E-58 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain YE3161 bb4c3f812a0bf2877f37308597016515 369 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 1 100 1.8E-20 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 YE3161 bb4c3f812a0bf2877f37308597016515 369 Pfam PF01872 RibD C-terminal domain 148 361 2.8E-59 T 22-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 YE3161 bb4c3f812a0bf2877f37308597016515 369 SUPERFAMILY SSF53927 4 146 3.35E-49 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 YE1281 60a62d0dea6fc18141879a060dfd26e4 361 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 YE1281 60a62d0dea6fc18141879a060dfd26e4 361 Hamap MF_00300 Chorismate synthase [aroC]. 10 354 37.954 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 YE1281 60a62d0dea6fc18141879a060dfd26e4 361 PANTHER PTHR21085 2 352 8.7E-225 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 YE1281 60a62d0dea6fc18141879a060dfd26e4 361 Gene3D G3DSA:3.60.150.10 10 352 7.9E-162 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 YE1281 60a62d0dea6fc18141879a060dfd26e4 361 SUPERFAMILY SSF103263 4 351 3.4E-149 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 YE1281 60a62d0dea6fc18141879a060dfd26e4 361 PIRSF PIRSF001456 3 358 3.2E-143 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 YE1281 60a62d0dea6fc18141879a060dfd26e4 361 Pfam PF01264 Chorismate synthase 10 345 5.3E-144 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 YE1281 60a62d0dea6fc18141879a060dfd26e4 361 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 1.6E-141 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 YE1281 60a62d0dea6fc18141879a060dfd26e4 361 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 YE1281 60a62d0dea6fc18141879a060dfd26e4 361 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 YE0909 b350b5e05be7fc26e4b0dcfd2154a690 154 PIRSF PIRSF020565 1 152 9.2E-43 T 22-04-2016 IPR016776 3-hydroxylacyl-(acyl carrier protein) dehydratase, predicted YE0909 b350b5e05be7fc26e4b0dcfd2154a690 154 SUPERFAMILY SSF54637 5 142 4.18E-24 T 22-04-2016 IPR029069 HotDog domain YE0909 b350b5e05be7fc26e4b0dcfd2154a690 154 Gene3D G3DSA:3.10.129.10 7 137 3.2E-18 T 22-04-2016 IPR029069 HotDog domain YE0909 b350b5e05be7fc26e4b0dcfd2154a690 154 Pfam PF07977 FabA-like domain 9 131 2.7E-5 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 YE3192 3094b8269b7c18ea90fea59847c5fb03 89 PANTHER PTHR34156 2 89 2.0E-23 T 22-04-2016 YE3192 3094b8269b7c18ea90fea59847c5fb03 89 SUPERFAMILY SSF159871 2 89 7.06E-25 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 YE3192 3094b8269b7c18ea90fea59847c5fb03 89 Pfam PF07338 Protein of unknown function (DUF1471) 33 89 2.9E-20 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 YE3192 3094b8269b7c18ea90fea59847c5fb03 89 Gene3D G3DSA:3.30.1660.10 17 89 3.1E-21 T 22-04-2016 IPR025543 Dodecin-like YE4185 eb8908a258b651513552c30399bc58fa 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 331 436 5.6E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE4185 eb8908a258b651513552c30399bc58fa 449 Gene3D G3DSA:3.30.565.10 288 436 1.2E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE4185 eb8908a258b651513552c30399bc58fa 449 SUPERFAMILY SSF47384 213 282 8.63E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE4185 eb8908a258b651513552c30399bc58fa 449 PANTHER PTHR24423 219 436 3.7E-53 T 22-04-2016 YE4185 eb8908a258b651513552c30399bc58fa 449 PANTHER PTHR24423 26 45 3.7E-53 T 22-04-2016 YE4185 eb8908a258b651513552c30399bc58fa 449 SUPERFAMILY SSF55874 275 439 1.57E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE4185 eb8908a258b651513552c30399bc58fa 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 369 383 1.3E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE4185 eb8908a258b651513552c30399bc58fa 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 416 1.3E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE4185 eb8908a258b651513552c30399bc58fa 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 435 1.3E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE4185 eb8908a258b651513552c30399bc58fa 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 397 1.3E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE4185 eb8908a258b651513552c30399bc58fa 449 SMART SM00388 221 288 1.8E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE4185 eb8908a258b651513552c30399bc58fa 449 Pfam PF00512 His Kinase A (phospho-acceptor) domain 222 283 1.7E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE4185 eb8908a258b651513552c30399bc58fa 449 Gene3D G3DSA:1.10.287.130 218 281 3.4E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE4185 eb8908a258b651513552c30399bc58fa 449 SMART SM00387 330 438 2.7E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE0088 ca72a989081912ae02ca6222e39016b7 300 Gene3D G3DSA:3.30.70.1350 207 287 3.0E-30 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain YE0088 ca72a989081912ae02ca6222e39016b7 300 SUPERFAMILY SSF160240 209 287 9.94E-25 T 22-04-2016 YE0088 ca72a989081912ae02ca6222e39016b7 300 PANTHER PTHR11562:SF55 1 296 1.6E-122 T 22-04-2016 YE0088 ca72a989081912ae02ca6222e39016b7 300 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 286 8.7E-25 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain YE0088 ca72a989081912ae02ca6222e39016b7 300 Gene3D G3DSA:1.20.1510.10 12 206 2.6E-44 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain YE0088 ca72a989081912ae02ca6222e39016b7 300 PANTHER PTHR11562 1 296 1.6E-122 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 YE0088 ca72a989081912ae02ca6222e39016b7 300 SUPERFAMILY SSF161111 9 207 3.53E-51 T 22-04-2016 YE0088 ca72a989081912ae02ca6222e39016b7 300 Hamap MF_01425 Ferrous-iron efflux pump FieF [fieF]. 1 300 61.5 T 22-04-2016 IPR023783 Cation efflux pump FieF GO:0006829|GO:0015684|GO:0016021|GO:0046873 YE0088 ca72a989081912ae02ca6222e39016b7 300 Pfam PF01545 Cation efflux family 16 206 1.1E-44 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 YE0088 ca72a989081912ae02ca6222e39016b7 300 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 11 286 7.2E-73 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 YE2128 a85d257134b684a56d1fd1d227fcd3fe 330 PANTHER PTHR24220 5 329 2.8E-221 T 22-04-2016 YE2128 a85d257134b684a56d1fd1d227fcd3fe 330 SMART SM00382 32 235 3.2E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain YE2128 a85d257134b684a56d1fd1d227fcd3fe 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 4.1E-16 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 YE2128 a85d257134b684a56d1fd1d227fcd3fe 330 Gene3D G3DSA:3.40.50.300 2 262 1.5E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2128 a85d257134b684a56d1fd1d227fcd3fe 330 Pfam PF00005 ABC transporter 24 187 7.0E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE2128 a85d257134b684a56d1fd1d227fcd3fe 330 PANTHER PTHR24220:SF514 5 329 2.8E-221 T 22-04-2016 YE2128 a85d257134b684a56d1fd1d227fcd3fe 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 323 3.9E-20 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 YE2128 a85d257134b684a56d1fd1d227fcd3fe 330 SUPERFAMILY SSF52540 3 266 3.41E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3458 a77a8112fb0a4d712ede6e3d2bad3ab3 300 SUPERFAMILY SSF160940 3 278 4.18E-124 T 22-04-2016 YE3458 a77a8112fb0a4d712ede6e3d2bad3ab3 300 Gene3D G3DSA:1.10.3530.10 30 194 1.5E-74 T 22-04-2016 IPR023136 Api92-like domain YE3458 a77a8112fb0a4d712ede6e3d2bad3ab3 300 Pfam PF06924 Protein of unknown function (DUF1281) 9 141 1.3E-55 T 22-04-2016 IPR009694 Protein of unknown function DUF1281 YE3458 a77a8112fb0a4d712ede6e3d2bad3ab3 300 Gene3D G3DSA:3.30.70.1270 195 275 1.2E-41 T 22-04-2016 YE0428 468504a7cbd79b8f2c1f3d87fd4f7275 644 SUPERFAMILY SSF140990 402 601 1.44E-72 T 22-04-2016 YE0428 468504a7cbd79b8f2c1f3d87fd4f7275 644 Gene3D G3DSA:3.40.50.300 144 331 4.7E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0428 468504a7cbd79b8f2c1f3d87fd4f7275 644 Gene3D G3DSA:1.10.8.60 332 406 8.0E-28 T 22-04-2016 YE0428 468504a7cbd79b8f2c1f3d87fd4f7275 644 SUPERFAMILY SSF52540 142 391 2.96E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0428 468504a7cbd79b8f2c1f3d87fd4f7275 644 PANTHER PTHR23076 1 628 0.0 T 22-04-2016 YE0428 468504a7cbd79b8f2c1f3d87fd4f7275 644 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 188 320 5.2E-46 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 YE0428 468504a7cbd79b8f2c1f3d87fd4f7275 644 Pfam PF06480 FtsH Extracellular 5 93 9.5E-15 T 22-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 YE0428 468504a7cbd79b8f2c1f3d87fd4f7275 644 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 608 37.313 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 YE0428 468504a7cbd79b8f2c1f3d87fd4f7275 644 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 100 593 1.1E-246 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 YE0428 468504a7cbd79b8f2c1f3d87fd4f7275 644 Pfam PF01434 Peptidase family M41 382 591 9.2E-82 T 22-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 YE0428 468504a7cbd79b8f2c1f3d87fd4f7275 644 ProSitePatterns PS00674 AAA-protein family signature. 291 309 - T 22-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 YE0428 468504a7cbd79b8f2c1f3d87fd4f7275 644 SMART SM00382 184 323 1.9E-26 T 22-04-2016 IPR003593 AAA+ ATPase domain YE0172 159f632af435e5c8a56df3d53620ee43 420 PANTHER PTHR11374:SF4 1 420 3.0E-197 T 22-04-2016 YE0172 159f632af435e5c8a56df3d53620ee43 420 SUPERFAMILY SSF51735 5 198 8.83E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain YE0172 159f632af435e5c8a56df3d53620ee43 420 Gene3D G3DSA:3.40.50.720 237 419 5.5E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain YE0172 159f632af435e5c8a56df3d53620ee43 420 SUPERFAMILY SSF52413 311 419 5.1E-26 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 YE0172 159f632af435e5c8a56df3d53620ee43 420 PANTHER PTHR11374 1 420 3.0E-197 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 YE0172 159f632af435e5c8a56df3d53620ee43 420 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 206 293 6.5E-26 T 22-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 YE0172 159f632af435e5c8a56df3d53620ee43 420 SMART SM00984 324 420 2.0E-24 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 YE0172 159f632af435e5c8a56df3d53620ee43 420 Gene3D G3DSA:3.40.50.720 6 202 8.4E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain YE0172 159f632af435e5c8a56df3d53620ee43 420 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 5 189 5.0E-58 T 22-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 YE0172 159f632af435e5c8a56df3d53620ee43 420 PIRSF PIRSF500136 1 420 6.7E-148 T 22-04-2016 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 YE0172 159f632af435e5c8a56df3d53620ee43 420 Gene3D G3DSA:1.20.5.100 206 234 9.7E-6 T 22-04-2016 YE0172 159f632af435e5c8a56df3d53620ee43 420 PIRSF PIRSF000124 4 418 4.2E-74 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 YE0172 159f632af435e5c8a56df3d53620ee43 420 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 324 419 4.5E-19 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 YE0172 159f632af435e5c8a56df3d53620ee43 420 SUPERFAMILY SSF48179 206 298 1.62E-27 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 YE0172 159f632af435e5c8a56df3d53620ee43 420 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 5 416 1.2E-118 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 YE0172 159f632af435e5c8a56df3d53620ee43 420 Hamap MF_02029 UDP-N-acetyl-D-mannosamine dehydrogenase [wecC]. 1 420 75.891 T 22-04-2016 IPR032891 UDP-N-acetyl-D-mannosamine dehydrogenase WecC GO:0009246|GO:0089714 KEGG: 00520+1.1.1.336|MetaCyc: PWY-7335|UniPathway: UPA00566 YE0385 f39d2eaa663c5005a6e7b2e9e09434ac 246 Gene3D G3DSA:3.30.1330.30 1 75 3.8E-26 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like YE0385 f39d2eaa663c5005a6e7b2e9e09434ac 246 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 2 243 44.269 T 22-04-2016 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB YE0385 f39d2eaa663c5005a6e7b2e9e09434ac 246 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 4 76 1.0E-19 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 YE0385 f39d2eaa663c5005a6e7b2e9e09434ac 246 PANTHER PTHR12029 3 242 3.0E-81 T 22-04-2016 YE0385 f39d2eaa663c5005a6e7b2e9e09434ac 246 SUPERFAMILY SSF75217 69 243 5.1E-49 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases YE0385 f39d2eaa663c5005a6e7b2e9e09434ac 246 Gene3D G3DSA:3.40.1280.10 93 243 5.4E-54 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YE0385 f39d2eaa663c5005a6e7b2e9e09434ac 246 SUPERFAMILY SSF55315 2 75 6.0E-20 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like YE0385 f39d2eaa663c5005a6e7b2e9e09434ac 246 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 1 242 5.7E-90 T 22-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 YE0385 f39d2eaa663c5005a6e7b2e9e09434ac 246 Pfam PF00588 SpoU rRNA Methylase family 96 236 9.0E-40 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 YE0385 f39d2eaa663c5005a6e7b2e9e09434ac 246 SMART SM00967 4 80 6.4E-22 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 YE4212 d743bef4d838c087eea3971985d9f65e 274 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 42 269 1.7E-43 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 YE4212 d743bef4d838c087eea3971985d9f65e 274 SUPERFAMILY SSF81336 98 268 1.96E-48 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 YE4212 d743bef4d838c087eea3971985d9f65e 274 PRINTS PR00123 ATP synthase A subunit signature 254 269 3.7E-15 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 YE4212 d743bef4d838c087eea3971985d9f65e 274 PRINTS PR00123 ATP synthase A subunit signature 107 123 3.7E-15 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 YE4212 d743bef4d838c087eea3971985d9f65e 274 PRINTS PR00123 ATP synthase A subunit signature 206 228 3.7E-15 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 YE4212 d743bef4d838c087eea3971985d9f65e 274 PANTHER PTHR11410 141 274 6.4E-113 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 YE4212 d743bef4d838c087eea3971985d9f65e 274 PANTHER PTHR11410 1 125 6.4E-113 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 YE4212 d743bef4d838c087eea3971985d9f65e 274 Hamap MF_01393 ATP synthase subunit a [atpB]. 14 274 15.942 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 YE4212 d743bef4d838c087eea3971985d9f65e 274 Gene3D G3DSA:1.20.120.220 99 274 5.9E-58 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 YE4212 d743bef4d838c087eea3971985d9f65e 274 ProSitePatterns PS00449 ATP synthase a subunit signature. 209 218 - T 22-04-2016 IPR023011 ATPase, F0 complex, subunit A, active site YE4212 d743bef4d838c087eea3971985d9f65e 274 Pfam PF00119 ATP synthase A chain 50 268 7.4E-55 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 YE4212 d743bef4d838c087eea3971985d9f65e 274 PANTHER PTHR11410:SF7 141 274 6.4E-113 T 22-04-2016 YE4212 d743bef4d838c087eea3971985d9f65e 274 PANTHER PTHR11410:SF7 1 125 6.4E-113 T 22-04-2016 YE0555 43bfa31d13d0fd63e165e88942515633 381 PANTHER PTHR30535 1 380 1.4E-65 T 22-04-2016 YE0555 43bfa31d13d0fd63e165e88942515633 381 PANTHER PTHR30535:SF5 1 380 1.4E-65 T 22-04-2016 YE0555 43bfa31d13d0fd63e165e88942515633 381 Gene3D G3DSA:3.40.50.1980 183 357 3.6E-23 T 22-04-2016 YE0555 43bfa31d13d0fd63e165e88942515633 381 Gene3D G3DSA:3.40.50.1980 48 182 1.6E-13 T 22-04-2016 YE0555 43bfa31d13d0fd63e165e88942515633 381 Pfam PF01497 Periplasmic binding protein 70 325 1.2E-23 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 YE0555 43bfa31d13d0fd63e165e88942515633 381 SUPERFAMILY SSF53807 30 349 3.92E-45 T 22-04-2016 YE3723 02e9bc7a0e642b3f54a808b917e4692c 331 PANTHER PTHR11732 1 323 5.5E-188 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta YE3723 02e9bc7a0e642b3f54a808b917e4692c 331 Gene3D G3DSA:3.20.20.100 1 323 6.2E-114 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YE3723 02e9bc7a0e642b3f54a808b917e4692c 331 Pfam PF00248 Aldo/keto reductase family 16 310 9.6E-77 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YE3723 02e9bc7a0e642b3f54a808b917e4692c 331 PANTHER PTHR11732:SF215 1 323 5.5E-188 T 22-04-2016 YE3723 02e9bc7a0e642b3f54a808b917e4692c 331 SUPERFAMILY SSF51430 1 313 8.12E-104 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YE2387 1045bdcf72cd81876f3052ca8b37e72b 417 Pfam PF01551 Peptidase family M23 290 384 3.5E-34 T 22-04-2016 IPR016047 Peptidase M23 YE2387 1045bdcf72cd81876f3052ca8b37e72b 417 SUPERFAMILY SSF51261 142 385 1.94E-70 T 22-04-2016 IPR011055 Duplicated hybrid motif YE2387 1045bdcf72cd81876f3052ca8b37e72b 417 Gene3D G3DSA:3.10.350.10 75 117 1.7E-5 T 22-04-2016 IPR018392 LysM domain YE2387 1045bdcf72cd81876f3052ca8b37e72b 417 PANTHER PTHR21666:SF207 1 411 1.5E-220 T 22-04-2016 YE2387 1045bdcf72cd81876f3052ca8b37e72b 417 SMART SM00257 75 120 8.3E-5 T 22-04-2016 IPR018392 LysM domain YE2387 1045bdcf72cd81876f3052ca8b37e72b 417 Pfam PF04225 Opacity-associated protein A LysM-like domain 74 137 2.3E-6 T 22-04-2016 IPR007340 Opacity-associated protein A YE2387 1045bdcf72cd81876f3052ca8b37e72b 417 Gene3D G3DSA:2.70.70.10 244 386 1.7E-49 T 22-04-2016 YE2387 1045bdcf72cd81876f3052ca8b37e72b 417 PANTHER PTHR21666 1 411 1.5E-220 T 22-04-2016 YE2362 5d778f86bd55ea1c15e54d78c49555e2 581 Gene3D G3DSA:3.90.120.10 497 559 1.3E-17 T 22-04-2016 YE2362 5d778f86bd55ea1c15e54d78c49555e2 581 Gene3D G3DSA:3.90.120.10 213 266 1.3E-17 T 22-04-2016 YE2362 5d778f86bd55ea1c15e54d78c49555e2 581 Gene3D G3DSA:3.90.120.10 370 371 1.3E-17 T 22-04-2016 YE2362 5d778f86bd55ea1c15e54d78c49555e2 581 PANTHER PTHR10629:SF32 2 153 3.1E-41 T 22-04-2016 YE2362 5d778f86bd55ea1c15e54d78c49555e2 581 SUPERFAMILY SSF53335 5 153 3.43E-62 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE2362 5d778f86bd55ea1c15e54d78c49555e2 581 SUPERFAMILY SSF53335 471 566 3.43E-62 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE2362 5d778f86bd55ea1c15e54d78c49555e2 581 SUPERFAMILY SSF53335 185 265 3.43E-62 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE2362 5d778f86bd55ea1c15e54d78c49555e2 581 PANTHER PTHR10629 185 283 3.1E-41 T 22-04-2016 YE2362 5d778f86bd55ea1c15e54d78c49555e2 581 PANTHER PTHR10629:SF32 185 283 3.1E-41 T 22-04-2016 YE2362 5d778f86bd55ea1c15e54d78c49555e2 581 Pfam PF00145 C-5 cytosine-specific DNA methylase 5 121 6.0E-9 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE2362 5d778f86bd55ea1c15e54d78c49555e2 581 Pfam PF00145 C-5 cytosine-specific DNA methylase 499 566 9.3E-5 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE2362 5d778f86bd55ea1c15e54d78c49555e2 581 Gene3D G3DSA:3.40.50.150 184 212 1.2E-26 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE2362 5d778f86bd55ea1c15e54d78c49555e2 581 Gene3D G3DSA:3.40.50.150 5 124 1.2E-26 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE2362 5d778f86bd55ea1c15e54d78c49555e2 581 PANTHER PTHR10629 2 153 3.1E-41 T 22-04-2016 YE2856 dd15866ee9a7c32f4b49baae80f2fc0f 371 PANTHER PTHR34501:SF3 2 371 5.0E-263 T 22-04-2016 YE2856 dd15866ee9a7c32f4b49baae80f2fc0f 371 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 326 342 - T 22-04-2016 IPR013793 Porin, Gram-negative type, conserved site YE2856 dd15866ee9a7c32f4b49baae80f2fc0f 371 Pfam PF00267 Gram-negative porin 27 371 1.1E-144 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 YE2856 dd15866ee9a7c32f4b49baae80f2fc0f 371 PANTHER PTHR34501 2 371 5.0E-263 T 22-04-2016 YE2856 dd15866ee9a7c32f4b49baae80f2fc0f 371 Gene3D G3DSA:2.40.160.10 22 371 8.2E-104 T 22-04-2016 IPR023614 Porin domain YE2856 dd15866ee9a7c32f4b49baae80f2fc0f 371 SUPERFAMILY SSF56935 22 371 3.14E-78 T 22-04-2016 YE2856 dd15866ee9a7c32f4b49baae80f2fc0f 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 153 164 1.7E-17 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 YE2856 dd15866ee9a7c32f4b49baae80f2fc0f 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 326 343 1.7E-17 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 YE2856 dd15866ee9a7c32f4b49baae80f2fc0f 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 52 63 1.7E-17 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 YE2856 dd15866ee9a7c32f4b49baae80f2fc0f 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 236 248 1.7E-17 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 YE2856 dd15866ee9a7c32f4b49baae80f2fc0f 371 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 96 106 1.7E-17 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 YE2856 dd15866ee9a7c32f4b49baae80f2fc0f 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 282 301 5.5E-65 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 YE2856 dd15866ee9a7c32f4b49baae80f2fc0f 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 96 118 5.5E-65 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 YE2856 dd15866ee9a7c32f4b49baae80f2fc0f 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 5.5E-65 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 YE2856 dd15866ee9a7c32f4b49baae80f2fc0f 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 151 173 5.5E-65 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 YE2856 dd15866ee9a7c32f4b49baae80f2fc0f 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 242 259 5.5E-65 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 YE2856 dd15866ee9a7c32f4b49baae80f2fc0f 371 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 5.5E-65 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 YE0688 cf8fb4ff857ed01830e6c4be76efaaf2 399 PRINTS PR00812 Bacterial general secretion pathway protein F signature 363 377 2.1E-17 T 22-04-2016 IPR003004 GspF/PilC family YE0688 cf8fb4ff857ed01830e6c4be76efaaf2 399 PRINTS PR00812 Bacterial general secretion pathway protein F signature 60 72 2.1E-17 T 22-04-2016 IPR003004 GspF/PilC family YE0688 cf8fb4ff857ed01830e6c4be76efaaf2 399 PRINTS PR00812 Bacterial general secretion pathway protein F signature 379 398 2.1E-17 T 22-04-2016 IPR003004 GspF/PilC family YE0688 cf8fb4ff857ed01830e6c4be76efaaf2 399 PRINTS PR00812 Bacterial general secretion pathway protein F signature 159 187 2.1E-17 T 22-04-2016 IPR003004 GspF/PilC family YE0688 cf8fb4ff857ed01830e6c4be76efaaf2 399 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 159 187 - T 22-04-2016 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 YE0688 cf8fb4ff857ed01830e6c4be76efaaf2 399 Pfam PF00482 Type II secretion system (T2SS), protein F 65 187 4.9E-26 T 22-04-2016 IPR018076 Type II secretion system F domain YE0688 cf8fb4ff857ed01830e6c4be76efaaf2 399 Pfam PF00482 Type II secretion system (T2SS), protein F 270 390 7.7E-28 T 22-04-2016 IPR018076 Type II secretion system F domain YE0688 cf8fb4ff857ed01830e6c4be76efaaf2 399 PANTHER PTHR30012:SF0 5 399 3.9E-147 T 22-04-2016 YE0688 cf8fb4ff857ed01830e6c4be76efaaf2 399 PANTHER PTHR30012 5 399 3.9E-147 T 22-04-2016 YE4108 c5a820ac890629333e327d9ce3e6f231 153 SUPERFAMILY SSF55729 2 136 2.03E-18 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE4108 c5a820ac890629333e327d9ce3e6f231 153 Gene3D G3DSA:3.40.630.30 2 149 2.8E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE4108 c5a820ac890629333e327d9ce3e6f231 153 Pfam PF13673 Acetyltransferase (GNAT) domain 75 135 1.1E-9 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YE3127 8ab4ed093e249c7382af192d2221fe74 232 PIRSF PIRSF006293 1 226 2.4E-83 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 YE3127 8ab4ed093e249c7382af192d2221fe74 232 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 220 51.24 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 YE3127 8ab4ed093e249c7382af192d2221fe74 232 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 207 6.7E-83 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 YE3127 8ab4ed093e249c7382af192d2221fe74 232 PANTHER PTHR11587 1 212 6.3E-104 T 22-04-2016 YE3127 8ab4ed093e249c7382af192d2221fe74 232 Gene3D G3DSA:3.40.50.620 1 219 9.8E-83 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YE3127 8ab4ed093e249c7382af192d2221fe74 232 PANTHER PTHR11587:SF3 1 212 6.3E-104 T 22-04-2016 YE3127 8ab4ed093e249c7382af192d2221fe74 232 Pfam PF06508 Queuosine biosynthesis protein QueC 3 212 2.7E-81 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 YE3127 8ab4ed093e249c7382af192d2221fe74 232 SUPERFAMILY SSF52402 1 221 7.94E-68 T 22-04-2016 YE3967 f5ac9676e4d89cf32ba28ea6506dbfb3 268 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 157 167 - T 22-04-2016 IPR024002 Formate/nitrite transporter, conserved site YE3967 f5ac9676e4d89cf32ba28ea6506dbfb3 268 Pfam PF01226 Formate/nitrite transporter 18 247 1.5E-56 T 22-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 YE3967 f5ac9676e4d89cf32ba28ea6506dbfb3 268 PANTHER PTHR30520 1 268 3.5E-133 T 22-04-2016 YE3967 f5ac9676e4d89cf32ba28ea6506dbfb3 268 PANTHER PTHR30520:SF5 1 268 3.5E-133 T 22-04-2016 YE3967 f5ac9676e4d89cf32ba28ea6506dbfb3 268 Gene3D G3DSA:1.20.1080.10 23 249 2.1E-61 T 22-04-2016 IPR023271 Aquaporin-like YE3967 f5ac9676e4d89cf32ba28ea6506dbfb3 268 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 73 82 - T 22-04-2016 IPR024002 Formate/nitrite transporter, conserved site YE3967 f5ac9676e4d89cf32ba28ea6506dbfb3 268 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 20 250 4.9E-79 T 22-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 YE3463 618b6257273bf8ab1143c6347757d7ec 327 Gene3D G3DSA:3.30.460.10 10 159 7.2E-20 T 22-04-2016 YE3463 618b6257273bf8ab1143c6347757d7ec 327 SMART SM00954 49 179 9.1E-18 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 YE3463 618b6257273bf8ab1143c6347757d7ec 327 SUPERFAMILY SSF81301 6 210 9.81E-31 T 22-04-2016 YE3463 618b6257273bf8ab1143c6347757d7ec 327 Pfam PF04607 Region found in RelA / SpoT proteins 49 176 7.9E-16 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 YE2440 209f61e249f5458c684f83747c5e9871 388 PANTHER PTHR22935:SF64 23 388 1.1E-66 T 22-04-2016 YE2440 209f61e249f5458c684f83747c5e9871 388 ProSitePatterns PS00336 Beta-lactamase class-C active site. 85 92 - T 22-04-2016 IPR001586 Beta-lactamase, class-C active site GO:0008800|GO:0017001|GO:0030288 KEGG: 00311+3.5.2.6 YE2440 209f61e249f5458c684f83747c5e9871 388 Gene3D G3DSA:3.40.710.10 31 387 3.1E-86 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YE2440 209f61e249f5458c684f83747c5e9871 388 PANTHER PTHR22935 23 388 1.1E-66 T 22-04-2016 YE2440 209f61e249f5458c684f83747c5e9871 388 SUPERFAMILY SSF56601 30 387 6.95E-99 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YE2440 209f61e249f5458c684f83747c5e9871 388 Pfam PF00144 Beta-lactamase 38 386 2.4E-79 T 22-04-2016 IPR001466 Beta-lactamase-related YE1924 4b48b185139ab6108160aa088ebd3b8e 298 PANTHER PTHR34611 1 298 7.5E-190 T 22-04-2016 YE1924 4b48b185139ab6108160aa088ebd3b8e 298 Pfam PF04754 Putative transposase, YhgA-like 6 207 7.2E-86 T 22-04-2016 IPR006842 Transposase (putative), YhgA-like YE1924 4b48b185139ab6108160aa088ebd3b8e 298 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 7 296 9.8E-67 T 22-04-2016 IPR010106 Conserved hypothetical protein CHP01784 YE1924 4b48b185139ab6108160aa088ebd3b8e 298 PANTHER PTHR34611:SF3 1 298 7.5E-190 T 22-04-2016 YE2563 533488d88fcf75ac10c70ca0d593809d 146 SUPERFAMILY SSF140566 2 120 4.58E-18 T 22-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 YE2563 533488d88fcf75ac10c70ca0d593809d 146 Gene3D G3DSA:1.20.58.300 3 119 1.1E-11 T 22-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 YE2563 533488d88fcf75ac10c70ca0d593809d 146 Pfam PF05130 FlgN protein 2 135 8.7E-25 T 22-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 YE0142 79df69dccc350298dfd27929d341e09a 496 Gene3D G3DSA:3.40.50.300 261 485 1.6E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0142 79df69dccc350298dfd27929d341e09a 496 PANTHER PTHR24220:SF440 6 380 7.8E-269 T 22-04-2016 YE0142 79df69dccc350298dfd27929d341e09a 496 SMART SM00382 280 474 3.7E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain YE0142 79df69dccc350298dfd27929d341e09a 496 SMART SM00382 29 217 8.5E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain YE0142 79df69dccc350298dfd27929d341e09a 496 SUPERFAMILY SSF52540 263 484 5.52E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0142 79df69dccc350298dfd27929d341e09a 496 SUPERFAMILY SSF52540 3 227 1.58E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0142 79df69dccc350298dfd27929d341e09a 496 Gene3D G3DSA:3.40.50.300 2 229 2.6E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0142 79df69dccc350298dfd27929d341e09a 496 ProSitePatterns PS00211 ABC transporters family signature. 398 412 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE0142 79df69dccc350298dfd27929d341e09a 496 PANTHER PTHR24220 6 380 7.8E-269 T 22-04-2016 YE0142 79df69dccc350298dfd27929d341e09a 496 Pfam PF00005 ABC transporter 20 169 2.3E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE0142 79df69dccc350298dfd27929d341e09a 496 Pfam PF00005 ABC transporter 272 425 3.0E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE3949 9af495aef644a516cb59a9939fd2a238 262 Pfam PF02567 Phenazine biosynthesis-like protein 8 240 7.6E-48 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- YE3949 9af495aef644a516cb59a9939fd2a238 262 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 1 235 3.8E-30 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- YE3949 9af495aef644a516cb59a9939fd2a238 262 PIRSF PIRSF016184 1 260 3.2E-52 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- YE3949 9af495aef644a516cb59a9939fd2a238 262 Gene3D G3DSA:3.10.310.10 1 126 1.1E-39 T 22-04-2016 YE3949 9af495aef644a516cb59a9939fd2a238 262 PANTHER PTHR13774 1 260 3.3E-88 T 22-04-2016 YE3949 9af495aef644a516cb59a9939fd2a238 262 Gene3D G3DSA:3.10.310.10 127 248 5.0E-42 T 22-04-2016 YE3949 9af495aef644a516cb59a9939fd2a238 262 SUPERFAMILY SSF54506 1 259 1.36E-69 T 22-04-2016 YE3949 9af495aef644a516cb59a9939fd2a238 262 PANTHER PTHR13774:SF17 1 260 3.3E-88 T 22-04-2016 YE1485 4563235bb64ad02b9b432816e64f3d82 377 SUPERFAMILY SSF50331 252 375 9.52E-18 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal YE1485 4563235bb64ad02b9b432816e64f3d82 377 Pfam PF00005 ABC transporter 36 177 4.7E-39 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE1485 4563235bb64ad02b9b432816e64f3d82 377 SUPERFAMILY SSF52540 19 257 4.5E-88 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1485 4563235bb64ad02b9b432816e64f3d82 377 Pfam PF08402 TOBE domain 295 375 1.4E-20 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 YE1485 4563235bb64ad02b9b432816e64f3d82 377 PANTHER PTHR24220:SF481 21 331 6.2E-204 T 22-04-2016 YE1485 4563235bb64ad02b9b432816e64f3d82 377 SMART SM00382 44 227 2.0E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain YE1485 4563235bb64ad02b9b432816e64f3d82 377 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE1485 4563235bb64ad02b9b432816e64f3d82 377 PANTHER PTHR24220 21 331 6.2E-204 T 22-04-2016 YE1485 4563235bb64ad02b9b432816e64f3d82 377 Gene3D G3DSA:3.40.50.300 11 254 5.1E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1485 4563235bb64ad02b9b432816e64f3d82 377 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 50 375 1.1E-145 T 22-04-2016 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 YE3403 a49b5a34e400fdb62a2a04df2f72f517 251 Pfam PF04402 Protein of unknown function (DUF541) 36 237 3.8E-45 T 22-04-2016 IPR007497 Protein of unknown function DUF541 YE3403 a49b5a34e400fdb62a2a04df2f72f517 251 PANTHER PTHR34387 6 246 1.9E-65 T 22-04-2016 YE3403 a49b5a34e400fdb62a2a04df2f72f517 251 PANTHER PTHR34387:SF1 6 246 1.9E-65 T 22-04-2016 YE3527 dc50f8870dd5babbddb735d154afed9e 720 SUPERFAMILY SSF52172 1 108 2.39E-35 T 22-04-2016 IPR011006 CheY-like superfamily YE3527 dc50f8870dd5babbddb735d154afed9e 720 TIGRFAM TIGR04301 ODC_inducible: ornithine decarboxylase SpeF 1 719 0.0 T 22-04-2016 IPR027568 Ornithine decarboxylase SpeF GO:0004586 KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 YE3527 dc50f8870dd5babbddb735d154afed9e 720 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 576 705 1.2E-48 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 YE3527 dc50f8870dd5babbddb735d154afed9e 720 Gene3D G3DSA:3.40.640.10 109 419 2.3E-114 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YE3527 dc50f8870dd5babbddb735d154afed9e 720 SUPERFAMILY SSF55904 571 719 7.19E-47 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 YE3527 dc50f8870dd5babbddb735d154afed9e 720 Gene3D G3DSA:3.90.1150.10 421 593 1.9E-71 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YE3527 dc50f8870dd5babbddb735d154afed9e 720 SUPERFAMILY SSF53383 109 567 1.17E-121 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YE3527 dc50f8870dd5babbddb735d154afed9e 720 PANTHER PTHR11751:SF425 110 580 1.3E-231 T 22-04-2016 YE3527 dc50f8870dd5babbddb735d154afed9e 720 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 350 364 - T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 YE3527 dc50f8870dd5babbddb735d154afed9e 720 Gene3D G3DSA:3.90.100.10 594 719 4.3E-38 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 YE3527 dc50f8870dd5babbddb735d154afed9e 720 PIRSF PIRSF009393 1 720 8.4E-292 T 22-04-2016 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 YE3527 dc50f8870dd5babbddb735d154afed9e 720 Gene3D G3DSA:3.40.50.220 1 108 4.9E-38 T 22-04-2016 IPR027464 Ornithine decarboxylase, N-terminal domain KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 YE3527 dc50f8870dd5babbddb735d154afed9e 720 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 109 551 1.4E-195 T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 YE3527 dc50f8870dd5babbddb735d154afed9e 720 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 5 103 3.6E-24 T 22-04-2016 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 YE3527 dc50f8870dd5babbddb735d154afed9e 720 PANTHER PTHR11751 110 580 1.3E-231 T 22-04-2016 YE1567 5b087c01cd25e887fbf3089779bcde33 871 Gene3D G3DSA:1.10.390.10 308 451 7.8E-34 T 22-04-2016 YE1567 5b087c01cd25e887fbf3089779bcde33 871 Pfam PF01433 Peptidase family M1 21 384 7.7E-70 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 YE1567 5b087c01cd25e887fbf3089779bcde33 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 258 268 5.8E-9 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 YE1567 5b087c01cd25e887fbf3089779bcde33 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 126 141 5.8E-9 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 YE1567 5b087c01cd25e887fbf3089779bcde33 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 176 191 5.8E-9 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 YE1567 5b087c01cd25e887fbf3089779bcde33 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 294 309 5.8E-9 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 YE1567 5b087c01cd25e887fbf3089779bcde33 871 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 313 325 5.8E-9 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 YE1567 5b087c01cd25e887fbf3089779bcde33 871 Gene3D G3DSA:1.25.50.10 546 870 1.7E-128 T 22-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal YE1567 5b087c01cd25e887fbf3089779bcde33 871 SUPERFAMILY SSF63737 1 193 1.05E-49 T 22-04-2016 YE1567 5b087c01cd25e887fbf3089779bcde33 871 PANTHER PTHR11533 609 869 0.0 T 22-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 YE1567 5b087c01cd25e887fbf3089779bcde33 871 PANTHER PTHR11533 10 586 0.0 T 22-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 YE1567 5b087c01cd25e887fbf3089779bcde33 871 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 12 869 0.0 T 22-04-2016 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 YE1567 5b087c01cd25e887fbf3089779bcde33 871 PANTHER PTHR11533:SF152 609 869 0.0 T 22-04-2016 YE1567 5b087c01cd25e887fbf3089779bcde33 871 PANTHER PTHR11533:SF152 10 586 0.0 T 22-04-2016 YE1567 5b087c01cd25e887fbf3089779bcde33 871 Pfam PF11940 Domain of unknown function (DUF3458) 459 827 2.2E-141 T 22-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal YE1567 5b087c01cd25e887fbf3089779bcde33 871 SUPERFAMILY SSF55486 204 450 1.1E-73 T 22-04-2016 YE3800 9f0d2525ecbb586ffbc64b6493ad067a 1291 Pfam PF13116 Protein of unknown function 504 784 7.2E-100 T 22-04-2016 IPR025263 Domain of unknown function DUF3971 YE3800 9f0d2525ecbb586ffbc64b6493ad067a 1291 PANTHER PTHR38690 1 1291 0.0 T 22-04-2016 YE3800 9f0d2525ecbb586ffbc64b6493ad067a 1291 Pfam PF13502 AsmA-like C-terminal region 1035 1277 1.8E-65 T 22-04-2016 IPR032712 AsmA-like, C-terminal YE3800 9f0d2525ecbb586ffbc64b6493ad067a 1291 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 2 1287 0.0 T 22-04-2016 IPR011836 Conserved hypothetical protein CHP02099 YE1478 3d0036acce06c52169e194f73eda0a3e 562 Gene3D G3DSA:3.30.70.1450 303 374 6.6E-7 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YE1478 3d0036acce06c52169e194f73eda0a3e 562 PANTHER PTHR30445 3 558 0.0 T 22-04-2016 YE1478 3d0036acce06c52169e194f73eda0a3e 562 Hamap MF_01015 Putative transport protein YbjL [ybjL]. 1 557 59.026 T 22-04-2016 IPR023017 Transport protein YbjL, putative YE1478 3d0036acce06c52169e194f73eda0a3e 562 Pfam PF02080 TrkA-C domain 305 372 1.4E-9 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YE1478 3d0036acce06c52169e194f73eda0a3e 562 Pfam PF02080 TrkA-C domain 227 278 5.7E-9 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YE1478 3d0036acce06c52169e194f73eda0a3e 562 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 21 169 2.6E-39 T 22-04-2016 IPR006512 YidE/YbjL duplication YE1478 3d0036acce06c52169e194f73eda0a3e 562 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 390 541 5.6E-47 T 22-04-2016 IPR006512 YidE/YbjL duplication YE1478 3d0036acce06c52169e194f73eda0a3e 562 PANTHER PTHR30445:SF4 3 558 0.0 T 22-04-2016 YE1478 3d0036acce06c52169e194f73eda0a3e 562 SUPERFAMILY SSF116726 291 374 5.23E-11 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YE1478 3d0036acce06c52169e194f73eda0a3e 562 Gene3D G3DSA:3.30.70.1450 228 283 3.9E-9 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YE1478 3d0036acce06c52169e194f73eda0a3e 562 SUPERFAMILY SSF116726 227 282 1.7E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YE1478 3d0036acce06c52169e194f73eda0a3e 562 Pfam PF06826 Predicted Permease Membrane Region 17 182 4.2E-40 T 22-04-2016 IPR006512 YidE/YbjL duplication YE1478 3d0036acce06c52169e194f73eda0a3e 562 Pfam PF06826 Predicted Permease Membrane Region 385 554 1.1E-41 T 22-04-2016 IPR006512 YidE/YbjL duplication YE2542 f0722486cb980494821def3ed16b57dc 408 Pfam PF02120 Flagellar hook-length control protein FliK 272 354 8.4E-21 T 22-04-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal YE2542 f0722486cb980494821def3ed16b57dc 408 PRINTS PR01007 Flagellar hook-length control protein signature 320 343 1.8E-39 T 22-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 YE2542 f0722486cb980494821def3ed16b57dc 408 PRINTS PR01007 Flagellar hook-length control protein signature 11 24 1.8E-39 T 22-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 YE2542 f0722486cb980494821def3ed16b57dc 408 PRINTS PR01007 Flagellar hook-length control protein signature 287 305 1.8E-39 T 22-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 YE2542 f0722486cb980494821def3ed16b57dc 408 PRINTS PR01007 Flagellar hook-length control protein signature 30 47 1.8E-39 T 22-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 YE2542 f0722486cb980494821def3ed16b57dc 408 PRINTS PR01007 Flagellar hook-length control protein signature 262 284 1.8E-39 T 22-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 YE2542 f0722486cb980494821def3ed16b57dc 408 PRINTS PR01007 Flagellar hook-length control protein signature 305 320 1.8E-39 T 22-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 YE2542 f0722486cb980494821def3ed16b57dc 408 PRINTS PR01007 Flagellar hook-length control protein signature 239 261 1.8E-39 T 22-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 YE2542 f0722486cb980494821def3ed16b57dc 408 PANTHER PTHR37533 162 408 1.7E-68 T 22-04-2016 YE2542 f0722486cb980494821def3ed16b57dc 408 PANTHER PTHR37533:SF2 162 408 1.7E-68 T 22-04-2016 YE3276 5391a5a930ab174b6e985250ef542749 794 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 794 1.8E-284 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 YE3276 5391a5a930ab174b6e985250ef542749 794 Pfam PF07244 Surface antigen variable number repeat 348 421 6.5E-15 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 YE3276 5391a5a930ab174b6e985250ef542749 794 Pfam PF07244 Surface antigen variable number repeat 176 263 4.4E-16 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 YE3276 5391a5a930ab174b6e985250ef542749 794 Pfam PF07244 Surface antigen variable number repeat 266 344 2.9E-12 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 YE3276 5391a5a930ab174b6e985250ef542749 794 Pfam PF07244 Surface antigen variable number repeat 92 172 2.5E-11 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 YE3276 5391a5a930ab174b6e985250ef542749 794 PANTHER PTHR12815 5 794 0.0 T 22-04-2016 YE3276 5391a5a930ab174b6e985250ef542749 794 PANTHER PTHR12815:SF11 5 794 0.0 T 22-04-2016 YE3276 5391a5a930ab174b6e985250ef542749 794 Pfam PF01103 Surface antigen 448 794 6.1E-102 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 YE3276 5391a5a930ab174b6e985250ef542749 794 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 794 26.098 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 YE3276 5391a5a930ab174b6e985250ef542749 794 Gene3D G3DSA:2.40.160.50 387 791 2.2E-25 T 22-04-2016 YE3276 5391a5a930ab174b6e985250ef542749 794 PIRSF PIRSF006076 1 794 1.6E-255 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 YE0338 033cff1c558af8dd3d25f1e211a3ff41 418 Hamap MF_00020 Acetate kinase [ackA]. 1 409 159.879 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YE0338 033cff1c558af8dd3d25f1e211a3ff41 418 SUPERFAMILY SSF53067 165 404 1.02E-83 T 22-04-2016 YE0338 033cff1c558af8dd3d25f1e211a3ff41 418 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 211 228 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YE0338 033cff1c558af8dd3d25f1e211a3ff41 418 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 19 30 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YE0338 033cff1c558af8dd3d25f1e211a3ff41 418 Gene3D G3DSA:3.30.420.40 18 212 3.7E-11 T 22-04-2016 YE0338 033cff1c558af8dd3d25f1e211a3ff41 418 Pfam PF00871 Acetokinase family 19 398 5.0E-148 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YE0338 033cff1c558af8dd3d25f1e211a3ff41 418 PIRSF PIRSF000722 15 409 2.0E-136 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YE0338 033cff1c558af8dd3d25f1e211a3ff41 418 PANTHER PTHR21060 15 414 2.5E-226 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YE0338 033cff1c558af8dd3d25f1e211a3ff41 418 PRINTS PR00471 Acetate kinase family signature 211 232 1.4E-46 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YE0338 033cff1c558af8dd3d25f1e211a3ff41 418 PRINTS PR00471 Acetate kinase family signature 386 398 1.4E-46 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YE0338 033cff1c558af8dd3d25f1e211a3ff41 418 PRINTS PR00471 Acetate kinase family signature 308 321 1.4E-46 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YE0338 033cff1c558af8dd3d25f1e211a3ff41 418 PRINTS PR00471 Acetate kinase family signature 181 194 1.4E-46 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YE0338 033cff1c558af8dd3d25f1e211a3ff41 418 PRINTS PR00471 Acetate kinase family signature 19 30 1.4E-46 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YE0338 033cff1c558af8dd3d25f1e211a3ff41 418 PRINTS PR00471 Acetate kinase family signature 330 346 1.4E-46 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YE0338 033cff1c558af8dd3d25f1e211a3ff41 418 SUPERFAMILY SSF53067 18 203 8.33E-63 T 22-04-2016 YE0338 033cff1c558af8dd3d25f1e211a3ff41 418 Gene3D G3DSA:3.30.420.40 213 404 1.3E-72 T 22-04-2016 YE0338 033cff1c558af8dd3d25f1e211a3ff41 418 Hamap MF_01881 Propionate kinase [tdcD]. 13 414 78.116 T 22-04-2016 IPR024917 Propionate kinase KEGG: 00640+2.7.2.15|MetaCyc: PWY-5437|MetaCyc: PWY-7013|UniPathway: UPA00052 YE0338 033cff1c558af8dd3d25f1e211a3ff41 418 TIGRFAM TIGR00016 ackA: acetate kinase 18 404 3.6E-153 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 YE0338 033cff1c558af8dd3d25f1e211a3ff41 418 PANTHER PTHR21060:SF17 15 414 2.5E-226 T 22-04-2016 YE1578 54b0a069f706f3fd29e2ef8142740104 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 172 7.8E-94 T 22-04-2016 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 YE1578 54b0a069f706f3fd29e2ef8142740104 172 Gene3D G3DSA:3.10.129.10 2 169 4.2E-62 T 22-04-2016 IPR029069 HotDog domain YE1578 54b0a069f706f3fd29e2ef8142740104 172 SUPERFAMILY SSF54637 3 169 6.88E-57 T 22-04-2016 IPR029069 HotDog domain YE1578 54b0a069f706f3fd29e2ef8142740104 172 Pfam PF07977 FabA-like domain 29 158 5.8E-54 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 YE1578 54b0a069f706f3fd29e2ef8142740104 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 172 51.464 T 22-04-2016 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 YE1341 117a22614d17aa995022f3940e616012 404 Gene3D G3DSA:3.40.640.10 55 279 4.1E-67 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YE1341 117a22614d17aa995022f3940e616012 404 PANTHER PTHR11751 9 404 6.3E-195 T 22-04-2016 YE1341 117a22614d17aa995022f3940e616012 404 Gene3D G3DSA:3.90.1150.10 280 403 1.6E-41 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YE1341 117a22614d17aa995022f3940e616012 404 SUPERFAMILY SSF53383 7 401 1.46E-94 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YE1341 117a22614d17aa995022f3940e616012 404 Pfam PF00155 Aminotransferase class I and II 58 388 4.0E-45 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YE1341 117a22614d17aa995022f3940e616012 404 PANTHER PTHR11751:SF303 9 404 6.3E-195 T 22-04-2016 YE0287 3042144a9c9f349ea0f0c2a927df0505 1406 PANTHER PTHR19376:SF32 963 1157 0.0 T 22-04-2016 YE0287 3042144a9c9f349ea0f0c2a927df0505 1406 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 4.0E-27 T 22-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YE0287 3042144a9c9f349ea0f0c2a927df0505 1406 PANTHER PTHR19376 1303 1384 0.0 T 22-04-2016 YE0287 3042144a9c9f349ea0f0c2a927df0505 1406 PANTHER PTHR19376 4 551 0.0 T 22-04-2016 YE0287 3042144a9c9f349ea0f0c2a927df0505 1406 PANTHER PTHR19376:SF32 4 551 0.0 T 22-04-2016 YE0287 3042144a9c9f349ea0f0c2a927df0505 1406 PANTHER PTHR19376 963 1157 0.0 T 22-04-2016 YE0287 3042144a9c9f349ea0f0c2a927df0505 1406 PANTHER PTHR19376 570 943 0.0 T 22-04-2016 YE0287 3042144a9c9f349ea0f0c2a927df0505 1406 Gene3D G3DSA:2.40.50.100 1156 1209 6.8E-5 T 22-04-2016 YE0287 3042144a9c9f349ea0f0c2a927df0505 1406 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 15 1377 10.426 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YE0287 3042144a9c9f349ea0f0c2a927df0505 1406 PANTHER PTHR19376:SF32 1177 1262 0.0 T 22-04-2016 YE0287 3042144a9c9f349ea0f0c2a927df0505 1406 Hamap MF_01323 DNA-directed RNA polymerase subunit gamma [rpoC1]. 13 588 32.158 T 22-04-2016 YE0287 3042144a9c9f349ea0f0c2a927df0505 1406 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1315 1.2E-78 T 22-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YE0287 3042144a9c9f349ea0f0c2a927df0505 1406 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 3.5E-89 T 22-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YE0287 3042144a9c9f349ea0f0c2a927df0505 1406 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 1.5E-18 T 22-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YE0287 3042144a9c9f349ea0f0c2a927df0505 1406 PANTHER PTHR19376 1177 1262 0.0 T 22-04-2016 YE0287 3042144a9c9f349ea0f0c2a927df0505 1406 SMART SM00663 235 514 1.1E-184 T 22-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YE0287 3042144a9c9f349ea0f0c2a927df0505 1406 Pfam PF00623 RNA polymerase Rpb1, domain 2 392 485 3.8E-27 T 22-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YE0287 3042144a9c9f349ea0f0c2a927df0505 1406 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 393 1.2E-7 T 22-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 YE0287 3042144a9c9f349ea0f0c2a927df0505 1406 PANTHER PTHR19376:SF32 1303 1384 0.0 T 22-04-2016 YE0287 3042144a9c9f349ea0f0c2a927df0505 1406 PANTHER PTHR19376:SF32 570 943 0.0 T 22-04-2016 YE0287 3042144a9c9f349ea0f0c2a927df0505 1406 Gene3D G3DSA:2.40.40.20 417 489 2.8E-37 T 22-04-2016 YE0287 3042144a9c9f349ea0f0c2a927df0505 1406 Gene3D G3DSA:2.40.40.20 349 376 2.8E-37 T 22-04-2016 YE0287 3042144a9c9f349ea0f0c2a927df0505 1406 SUPERFAMILY SSF64484 1133 1364 0.0 T 22-04-2016 YE0287 3042144a9c9f349ea0f0c2a927df0505 1406 SUPERFAMILY SSF64484 16 944 0.0 T 22-04-2016 YE0287 3042144a9c9f349ea0f0c2a927df0505 1406 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1367 0.0 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YE3076 7ff6d3282c36b9311df581a8fe79d5d7 358 PANTHER PTHR12526 20 322 1.9E-26 T 22-04-2016 YE3076 7ff6d3282c36b9311df581a8fe79d5d7 358 Gene3D G3DSA:3.40.50.2000 179 321 7.5E-23 T 22-04-2016 YE3076 7ff6d3282c36b9311df581a8fe79d5d7 358 Pfam PF00534 Glycosyl transferases group 1 181 323 7.6E-28 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 YE3076 7ff6d3282c36b9311df581a8fe79d5d7 358 SUPERFAMILY SSF53756 22 357 7.85E-50 T 22-04-2016 YE1891 95fb74ea16ef993a1570645748fd42ec 184 ProDom PD035714 MEMBRANE REGULATOR YNIB TRANSMEMBRANE YFEABCD YFEE PROBABLE LOCUS ESCHERICHIA ECS2432 1 181 2.0E-90 T 22-04-2016 YE1891 95fb74ea16ef993a1570645748fd42ec 184 Pfam PF14002 YniB-like protein 15 179 7.0E-83 T 22-04-2016 IPR025229 YniB-like protein YE1306 f9172c389804a0dae62d16a9965f5e7c 261 SUPERFAMILY SSF46689 208 256 1.75E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE1306 f9172c389804a0dae62d16a9965f5e7c 261 Pfam PF07883 Cupin domain 25 88 1.9E-7 T 22-04-2016 IPR013096 Cupin 2, conserved barrel YE1306 f9172c389804a0dae62d16a9965f5e7c 261 Gene3D G3DSA:2.60.120.10 14 88 2.0E-11 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YE1306 f9172c389804a0dae62d16a9965f5e7c 261 PANTHER PTHR11019:SF98 1 255 1.2E-126 T 22-04-2016 YE1306 f9172c389804a0dae62d16a9965f5e7c 261 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 223 238 3.3E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YE1306 f9172c389804a0dae62d16a9965f5e7c 261 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 238 254 3.3E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YE1306 f9172c389804a0dae62d16a9965f5e7c 261 SUPERFAMILY SSF51182 14 88 1.19E-13 T 22-04-2016 IPR011051 RmlC-like cupin domain YE1306 f9172c389804a0dae62d16a9965f5e7c 261 Gene3D G3DSA:1.10.10.60 153 208 8.8E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE1306 f9172c389804a0dae62d16a9965f5e7c 261 Gene3D G3DSA:1.10.10.60 209 256 5.2E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE1306 f9172c389804a0dae62d16a9965f5e7c 261 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 207 250 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 YE1306 f9172c389804a0dae62d16a9965f5e7c 261 Pfam PF12833 Helix-turn-helix domain 178 255 2.7E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YE1306 f9172c389804a0dae62d16a9965f5e7c 261 SMART SM00342 172 254 6.5E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YE1306 f9172c389804a0dae62d16a9965f5e7c 261 PANTHER PTHR11019 1 255 1.2E-126 T 22-04-2016 YE0833 e72e033c5975f211f64623fbf0471bfd 167 PANTHER PTHR33602 1 26 8.0E-47 T 22-04-2016 YE0833 e72e033c5975f211f64623fbf0471bfd 167 PANTHER PTHR33602 48 165 8.0E-47 T 22-04-2016 YE0833 e72e033c5975f211f64623fbf0471bfd 167 Gene3D G3DSA:1.10.10.10 71 116 2.7E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0833 e72e033c5975f211f64623fbf0471bfd 167 Gene3D G3DSA:1.10.10.10 2 70 1.0E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0833 e72e033c5975f211f64623fbf0471bfd 167 Pfam PF02631 RecX family 51 163 3.8E-31 T 22-04-2016 IPR003783 Regulatory protein RecX GO:0006282 YE0833 e72e033c5975f211f64623fbf0471bfd 167 PANTHER PTHR33602:SF1 1 26 8.0E-47 T 22-04-2016 YE0833 e72e033c5975f211f64623fbf0471bfd 167 PANTHER PTHR33602:SF1 48 165 8.0E-47 T 22-04-2016 YE0833 e72e033c5975f211f64623fbf0471bfd 167 Hamap MF_01114 Regulatory protein RecX [recX]. 2 167 14.985 T 22-04-2016 IPR003783 Regulatory protein RecX GO:0006282 YE0833 e72e033c5975f211f64623fbf0471bfd 167 Gene3D G3DSA:1.10.10.10 117 165 3.5E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0928 244bc6658483cb40d8a6103f92abe9ef 134 PIRSF PIRSF005087 1 134 3.5E-55 T 22-04-2016 IPR004465 Ribonucleotide reductase Class Ib, NrdI YE0928 244bc6658483cb40d8a6103f92abe9ef 134 SUPERFAMILY SSF52218 1 132 2.79E-23 T 22-04-2016 IPR029039 Flavoprotein-like domain YE0928 244bc6658483cb40d8a6103f92abe9ef 134 PANTHER PTHR37297:SF1 2 134 2.2E-51 T 22-04-2016 YE0928 244bc6658483cb40d8a6103f92abe9ef 134 Gene3D G3DSA:3.40.50.360 4 133 5.4E-56 T 22-04-2016 IPR029039 Flavoprotein-like domain YE0928 244bc6658483cb40d8a6103f92abe9ef 134 PANTHER PTHR37297 2 134 2.2E-51 T 22-04-2016 YE0928 244bc6658483cb40d8a6103f92abe9ef 134 Pfam PF07972 NrdI Flavodoxin like 5 123 1.1E-47 T 22-04-2016 IPR004465 Ribonucleotide reductase Class Ib, NrdI YE0928 244bc6658483cb40d8a6103f92abe9ef 134 Hamap MF_00128 Protein NrdI [nrdI]. 3 133 36.082 T 22-04-2016 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial YE0928 244bc6658483cb40d8a6103f92abe9ef 134 TIGRFAM TIGR00333 nrdI: nrdI protein 5 132 6.0E-53 T 22-04-2016 IPR004465 Ribonucleotide reductase Class Ib, NrdI YE0502 ea8d8b344eb439f8ebe459493455ebc1 356 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 354 3.4E-75 T 22-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 YE0502 ea8d8b344eb439f8ebe459493455ebc1 356 PANTHER PTHR33529:SF1 1 356 7.4E-174 T 22-04-2016 YE0502 ea8d8b344eb439f8ebe459493455ebc1 356 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 354 2.3E-141 T 22-04-2016 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 YE0502 ea8d8b344eb439f8ebe459493455ebc1 356 PANTHER PTHR33529 1 356 7.4E-174 T 22-04-2016 YE3776 6ea5319c44fb25ad1476cb86777f190c 906 SMART SM00831 51 124 1.9E-5 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal YE3776 6ea5319c44fb25ad1476cb86777f190c 906 Pfam PF00702 haloacid dehalogenase-like hydrolase 374 661 3.5E-19 T 22-04-2016 YE3776 6ea5319c44fb25ad1476cb86777f190c 906 SUPERFAMILY SSF81653 175 276 6.28E-26 T 22-04-2016 YE3776 6ea5319c44fb25ad1476cb86777f190c 906 Pfam PF00122 E1-E2 ATPase 129 369 1.8E-58 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 YE3776 6ea5319c44fb25ad1476cb86777f190c 906 SUPERFAMILY SSF56784 536 691 2.5E-37 T 22-04-2016 IPR023214 HAD-like domain YE3776 6ea5319c44fb25ad1476cb86777f190c 906 SUPERFAMILY SSF81660 347 551 2.42E-40 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 YE3776 6ea5319c44fb25ad1476cb86777f190c 906 Gene3D G3DSA:1.20.1110.10 616 896 9.8E-70 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain YE3776 6ea5319c44fb25ad1476cb86777f190c 906 Gene3D G3DSA:1.20.1110.10 105 156 9.8E-70 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain YE3776 6ea5319c44fb25ad1476cb86777f190c 906 Gene3D G3DSA:3.40.1110.10 370 554 2.0E-33 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 YE3776 6ea5319c44fb25ad1476cb86777f190c 906 PANTHER PTHR24093 59 906 0.0 T 22-04-2016 YE3776 6ea5319c44fb25ad1476cb86777f190c 906 Pfam PF00690 Cation transporter/ATPase, N-terminus 57 119 2.3E-14 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal YE3776 6ea5319c44fb25ad1476cb86777f190c 906 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 131 395 9.8E-34 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 YE3776 6ea5319c44fb25ad1476cb86777f190c 906 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 618 736 5.6E-29 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 YE3776 6ea5319c44fb25ad1476cb86777f190c 906 TIGRFAM TIGR01524 ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 45 906 0.0 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 YE3776 6ea5319c44fb25ad1476cb86777f190c 906 Gene3D G3DSA:2.70.150.10 68 104 3.9E-41 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 YE3776 6ea5319c44fb25ad1476cb86777f190c 906 Gene3D G3DSA:2.70.150.10 157 278 3.9E-41 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 YE3776 6ea5319c44fb25ad1476cb86777f190c 906 PRINTS PR01836 Magnesium-transporting ATPase signature 810 831 2.5E-84 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 YE3776 6ea5319c44fb25ad1476cb86777f190c 906 PRINTS PR01836 Magnesium-transporting ATPase signature 308 327 2.5E-84 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 YE3776 6ea5319c44fb25ad1476cb86777f190c 906 PRINTS PR01836 Magnesium-transporting ATPase signature 755 768 2.5E-84 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 YE3776 6ea5319c44fb25ad1476cb86777f190c 906 PRINTS PR01836 Magnesium-transporting ATPase signature 291 307 2.5E-84 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 YE3776 6ea5319c44fb25ad1476cb86777f190c 906 PRINTS PR01836 Magnesium-transporting ATPase signature 412 425 2.5E-84 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 YE3776 6ea5319c44fb25ad1476cb86777f190c 906 PRINTS PR01836 Magnesium-transporting ATPase signature 705 720 2.5E-84 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 YE3776 6ea5319c44fb25ad1476cb86777f190c 906 PRINTS PR01836 Magnesium-transporting ATPase signature 775 791 2.5E-84 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 YE3776 6ea5319c44fb25ad1476cb86777f190c 906 PRINTS PR01836 Magnesium-transporting ATPase signature 723 734 2.5E-84 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 YE3776 6ea5319c44fb25ad1476cb86777f190c 906 PRINTS PR01836 Magnesium-transporting ATPase signature 860 881 2.5E-84 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 YE3776 6ea5319c44fb25ad1476cb86777f190c 906 SUPERFAMILY SSF81665 696 904 8.76E-102 T 22-04-2016 YE3776 6ea5319c44fb25ad1476cb86777f190c 906 SUPERFAMILY SSF81665 279 372 8.76E-102 T 22-04-2016 YE3776 6ea5319c44fb25ad1476cb86777f190c 906 SUPERFAMILY SSF81665 58 162 8.76E-102 T 22-04-2016 YE3776 6ea5319c44fb25ad1476cb86777f190c 906 PANTHER PTHR24093:SF356 59 906 0.0 T 22-04-2016 YE3776 6ea5319c44fb25ad1476cb86777f190c 906 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 380 386 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site YE1609 ab77f22fd67241d52629cdf2b73006ec 511 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 79 103 - T 22-04-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 YE1609 ab77f22fd67241d52629cdf2b73006ec 511 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 9 501 6.4E-110 T 22-04-2016 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 YE1609 ab77f22fd67241d52629cdf2b73006ec 511 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 155 167 - T 22-04-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 YE1609 ab77f22fd67241d52629cdf2b73006ec 511 PANTHER PTHR11654 11 233 7.8E-127 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 YE1609 ab77f22fd67241d52629cdf2b73006ec 511 PANTHER PTHR11654 281 504 7.8E-127 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 YE1609 ab77f22fd67241d52629cdf2b73006ec 511 PANTHER PTHR11654:SF119 11 233 7.8E-127 T 22-04-2016 YE1609 ab77f22fd67241d52629cdf2b73006ec 511 PANTHER PTHR11654:SF119 281 504 7.8E-127 T 22-04-2016 YE1609 ab77f22fd67241d52629cdf2b73006ec 511 Gene3D G3DSA:1.20.1250.20 23 201 1.6E-16 T 22-04-2016 YE1609 ab77f22fd67241d52629cdf2b73006ec 511 Gene3D G3DSA:1.20.1250.20 293 501 4.5E-8 T 22-04-2016 YE1609 ab77f22fd67241d52629cdf2b73006ec 511 SUPERFAMILY SSF103473 336 499 2.22E-11 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE1609 ab77f22fd67241d52629cdf2b73006ec 511 SUPERFAMILY SSF103473 14 312 3.27E-25 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE1609 ab77f22fd67241d52629cdf2b73006ec 511 Pfam PF00854 POT family 91 464 3.6E-63 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 YE1503 32abfb4a46079435d78f097255156564 336 Gene3D G3DSA:3.40.50.720 1 232 3.3E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain YE1503 32abfb4a46079435d78f097255156564 336 SUPERFAMILY SSF51735 1 268 3.69E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain YE1503 32abfb4a46079435d78f097255156564 336 SUPERFAMILY SSF51735 296 332 3.69E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain YE1503 32abfb4a46079435d78f097255156564 336 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 232 4.3E-29 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 YE1503 32abfb4a46079435d78f097255156564 336 PANTHER PTHR10366:SF409 2 334 1.1E-192 T 22-04-2016 YE1503 32abfb4a46079435d78f097255156564 336 Gene3D G3DSA:3.90.25.10 233 330 1.5E-6 T 22-04-2016 YE1503 32abfb4a46079435d78f097255156564 336 PANTHER PTHR10366 2 334 1.1E-192 T 22-04-2016 YE1219 1902fe037db36aa8668cae29b556973b 409 Pfam PF01566 Natural resistance-associated macrophage protein 38 384 1.1E-122 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 YE1219 1902fe037db36aa8668cae29b556973b 409 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 19 377 2.8E-96 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 YE1219 1902fe037db36aa8668cae29b556973b 409 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 1 409 36.8 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 YE1219 1902fe037db36aa8668cae29b556973b 409 PRINTS PR00447 Natural resistance-associated macrophage protein signature 150 171 1.5E-30 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 YE1219 1902fe037db36aa8668cae29b556973b 409 PRINTS PR00447 Natural resistance-associated macrophage protein signature 299 318 1.5E-30 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 YE1219 1902fe037db36aa8668cae29b556973b 409 PRINTS PR00447 Natural resistance-associated macrophage protein signature 200 223 1.5E-30 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 YE1219 1902fe037db36aa8668cae29b556973b 409 PRINTS PR00447 Natural resistance-associated macrophage protein signature 97 123 1.5E-30 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 YE1219 1902fe037db36aa8668cae29b556973b 409 PRINTS PR00447 Natural resistance-associated macrophage protein signature 125 144 1.5E-30 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 YE1219 1902fe037db36aa8668cae29b556973b 409 PANTHER PTHR11706 12 409 1.4E-244 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 YE1219 1902fe037db36aa8668cae29b556973b 409 PANTHER PTHR11706:SF42 12 409 1.4E-244 T 22-04-2016 YE4196 f5fafb5249ef71c3b55849b8889af0dd 240 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 13 221 8.2E-75 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 YE4196 f5fafb5249ef71c3b55849b8889af0dd 240 Pfam PF01895 PhoU domain 128 212 5.4E-17 T 22-04-2016 IPR026022 PhoU domain YE4196 f5fafb5249ef71c3b55849b8889af0dd 240 Pfam PF01895 PhoU domain 26 111 1.4E-22 T 22-04-2016 IPR026022 PhoU domain YE4196 f5fafb5249ef71c3b55849b8889af0dd 240 PANTHER PTHR10010 1 224 2.7E-97 T 22-04-2016 YE4196 f5fafb5249ef71c3b55849b8889af0dd 240 Gene3D G3DSA:1.20.58.220 9 114 1.3E-37 T 22-04-2016 YE4196 f5fafb5249ef71c3b55849b8889af0dd 240 SUPERFAMILY SSF109755 13 230 1.67E-71 T 22-04-2016 YE4196 f5fafb5249ef71c3b55849b8889af0dd 240 PIRSF PIRSF003107 7 226 6.7E-69 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 YE4196 f5fafb5249ef71c3b55849b8889af0dd 240 PANTHER PTHR10010:SF14 1 224 2.7E-97 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 YE4196 f5fafb5249ef71c3b55849b8889af0dd 240 Gene3D G3DSA:1.20.58.220 127 236 9.0E-32 T 22-04-2016 YE0780 1309ce13b04adaa250ee754d03f5b086 181 PANTHER PTHR33420 14 181 2.1E-17 T 22-04-2016 YE0780 1309ce13b04adaa250ee754d03f5b086 181 SUPERFAMILY SSF49401 35 180 2.88E-32 T 22-04-2016 IPR008966 Adhesion domain YE0780 1309ce13b04adaa250ee754d03f5b086 181 Gene3D G3DSA:2.60.40.1090 33 180 3.3E-25 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YE3715 b1d01f25a04c9640e428398cb3710899 101 PANTHER PTHR35893:SF2 1 101 4.0E-73 T 22-04-2016 YE3715 b1d01f25a04c9640e428398cb3710899 101 PANTHER PTHR35893 1 101 4.0E-73 T 22-04-2016 YE3715 b1d01f25a04c9640e428398cb3710899 101 Pfam PF05957 Bacterial protein of unknown function (DUF883) 9 101 3.1E-32 T 22-04-2016 IPR010279 Protein of unknown function DUF883, ElaB YE3715 b1d01f25a04c9640e428398cb3710899 101 Gene3D G3DSA:1.20.120.20 8 75 1.2E-4 T 22-04-2016 YE1156 c94f47fc68fb0c8618a6160a797e926a 831 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 2 829 0.0 T 22-04-2016 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 YE1156 c94f47fc68fb0c8618a6160a797e926a 831 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 2 23 3.8E-6 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal YE1156 c94f47fc68fb0c8618a6160a797e926a 831 Pfam PF01568 Molydopterin dinucleotide binding domain 715 823 8.7E-25 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 YE1156 c94f47fc68fb0c8618a6160a797e926a 831 SUPERFAMILY SSF53706 37 702 7.2E-203 T 22-04-2016 YE1156 c94f47fc68fb0c8618a6160a797e926a 831 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 28 7.3E-5 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal YE1156 c94f47fc68fb0c8618a6160a797e926a 831 Pfam PF00384 Molybdopterin oxidoreductase 97 569 2.9E-90 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 YE1156 c94f47fc68fb0c8618a6160a797e926a 831 Gene3D G3DSA:3.40.50.740 622 669 2.0E-80 T 22-04-2016 YE1156 c94f47fc68fb0c8618a6160a797e926a 831 Gene3D G3DSA:3.40.50.740 97 179 2.0E-80 T 22-04-2016 YE1156 c94f47fc68fb0c8618a6160a797e926a 831 Gene3D G3DSA:3.40.50.740 400 576 2.0E-80 T 22-04-2016 YE1156 c94f47fc68fb0c8618a6160a797e926a 831 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 41 93 1.2E-17 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 YE1156 c94f47fc68fb0c8618a6160a797e926a 831 Gene3D G3DSA:3.40.228.10 180 292 1.8E-56 T 22-04-2016 YE1156 c94f47fc68fb0c8618a6160a797e926a 831 Gene3D G3DSA:3.40.228.10 326 399 1.8E-56 T 22-04-2016 YE1156 c94f47fc68fb0c8618a6160a797e926a 831 Gene3D G3DSA:2.40.40.20 670 828 2.7E-45 T 22-04-2016 YE1156 c94f47fc68fb0c8618a6160a797e926a 831 SMART SM00926 40 94 6.7E-16 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 YE1156 c94f47fc68fb0c8618a6160a797e926a 831 PANTHER PTHR11615:SF123 644 829 0.0 T 22-04-2016 YE1156 c94f47fc68fb0c8618a6160a797e926a 831 PANTHER PTHR11615:SF123 346 597 0.0 T 22-04-2016 YE1156 c94f47fc68fb0c8618a6160a797e926a 831 PANTHER PTHR11615:SF123 40 285 0.0 T 22-04-2016 YE1156 c94f47fc68fb0c8618a6160a797e926a 831 SUPERFAMILY SSF50692 689 828 9.04E-42 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain YE1156 c94f47fc68fb0c8618a6160a797e926a 831 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 45 62 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 YE1156 c94f47fc68fb0c8618a6160a797e926a 831 Gene3D G3DSA:2.20.25.90 39 96 5.0E-21 T 22-04-2016 YE1156 c94f47fc68fb0c8618a6160a797e926a 831 Hamap MF_01630 Nitrate reductase [napA]. 1 829 30.104 T 22-04-2016 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 YE1156 c94f47fc68fb0c8618a6160a797e926a 831 PANTHER PTHR11615 644 829 0.0 T 22-04-2016 YE1156 c94f47fc68fb0c8618a6160a797e926a 831 PANTHER PTHR11615 346 597 0.0 T 22-04-2016 YE1156 c94f47fc68fb0c8618a6160a797e926a 831 PANTHER PTHR11615 40 285 0.0 T 22-04-2016 YE2111 d2cf8d621f76e16c5e536fc2870008f1 235 SUPERFAMILY SSF53187 134 214 9.59E-32 T 22-04-2016 YE2111 d2cf8d621f76e16c5e536fc2870008f1 235 SUPERFAMILY SSF53187 18 107 9.59E-32 T 22-04-2016 YE2111 d2cf8d621f76e16c5e536fc2870008f1 235 Gene3D G3DSA:3.40.630.10 10 224 3.7E-39 T 22-04-2016 YE2111 d2cf8d621f76e16c5e536fc2870008f1 235 Pfam PF00246 Zinc carboxypeptidase 43 157 3.4E-11 T 22-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 YE3358 ae3267da214dec66740a7b12e9d4d96d 435 Pfam PF07690 Major Facilitator Superfamily 29 389 2.4E-52 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YE3358 ae3267da214dec66740a7b12e9d4d96d 435 Gene3D G3DSA:1.20.1250.20 19 211 5.7E-45 T 22-04-2016 YE3358 ae3267da214dec66740a7b12e9d4d96d 435 PANTHER PTHR11662:SF285 14 433 9.0E-276 T 22-04-2016 YE3358 ae3267da214dec66740a7b12e9d4d96d 435 Gene3D G3DSA:1.20.1250.20 237 432 2.7E-22 T 22-04-2016 YE3358 ae3267da214dec66740a7b12e9d4d96d 435 PANTHER PTHR11662 14 433 9.0E-276 T 22-04-2016 YE3358 ae3267da214dec66740a7b12e9d4d96d 435 SUPERFAMILY SSF103473 13 431 1.02E-79 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE2552 bf232c25e8ca15aedceb081f51bd54c0 307 PRINTS PR01002 Flagellar protein FlgJ signature 289 306 2.2E-99 T 22-04-2016 YE2552 bf232c25e8ca15aedceb081f51bd54c0 307 PRINTS PR01002 Flagellar protein FlgJ signature 271 289 2.2E-99 T 22-04-2016 YE2552 bf232c25e8ca15aedceb081f51bd54c0 307 PRINTS PR01002 Flagellar protein FlgJ signature 207 228 2.2E-99 T 22-04-2016 YE2552 bf232c25e8ca15aedceb081f51bd54c0 307 PRINTS PR01002 Flagellar protein FlgJ signature 229 250 2.2E-99 T 22-04-2016 YE2552 bf232c25e8ca15aedceb081f51bd54c0 307 PRINTS PR01002 Flagellar protein FlgJ signature 21 44 2.2E-99 T 22-04-2016 YE2552 bf232c25e8ca15aedceb081f51bd54c0 307 PRINTS PR01002 Flagellar protein FlgJ signature 104 129 2.2E-99 T 22-04-2016 YE2552 bf232c25e8ca15aedceb081f51bd54c0 307 PRINTS PR01002 Flagellar protein FlgJ signature 46 66 2.2E-99 T 22-04-2016 YE2552 bf232c25e8ca15aedceb081f51bd54c0 307 PRINTS PR01002 Flagellar protein FlgJ signature 141 164 2.2E-99 T 22-04-2016 YE2552 bf232c25e8ca15aedceb081f51bd54c0 307 PRINTS PR01002 Flagellar protein FlgJ signature 251 270 2.2E-99 T 22-04-2016 YE2552 bf232c25e8ca15aedceb081f51bd54c0 307 PRINTS PR01002 Flagellar protein FlgJ signature 165 183 2.2E-99 T 22-04-2016 YE2552 bf232c25e8ca15aedceb081f51bd54c0 307 PRINTS PR01002 Flagellar protein FlgJ signature 185 206 2.2E-99 T 22-04-2016 YE2552 bf232c25e8ca15aedceb081f51bd54c0 307 Pfam PF10135 Rod binding protein 43 89 1.8E-16 T 22-04-2016 IPR019301 Flagellar protein FlgJ, N-terminal YE2552 bf232c25e8ca15aedceb081f51bd54c0 307 SMART SM00047 136 300 2.9E-47 T 22-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 YE2552 bf232c25e8ca15aedceb081f51bd54c0 307 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 155 289 1.7E-20 T 22-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 YE2552 bf232c25e8ca15aedceb081f51bd54c0 307 PANTHER PTHR33308 9 296 1.8E-53 T 22-04-2016 YE2552 bf232c25e8ca15aedceb081f51bd54c0 307 PANTHER PTHR33308:SF3 9 296 1.8E-53 T 22-04-2016 YE2552 bf232c25e8ca15aedceb081f51bd54c0 307 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 5 289 7.9E-110 T 22-04-2016 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- YE0352 0c3857aa5e2e0a4957938fa84c3982c2 175 PANTHER PTHR35335 1 168 3.8E-43 T 22-04-2016 YE0352 0c3857aa5e2e0a4957938fa84c3982c2 175 PANTHER PTHR35335:SF1 1 168 3.8E-43 T 22-04-2016 YE0352 0c3857aa5e2e0a4957938fa84c3982c2 175 Pfam PF04186 FxsA cytoplasmic membrane protein 8 109 8.5E-33 T 22-04-2016 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 YE4074 28df197a72d14d8e01fa0f5da8d8f727 875 Pfam PF00535 Glycosyl transferase family 2 281 450 2.5E-33 T 22-04-2016 IPR001173 Glycosyltransferase 2-like YE4074 28df197a72d14d8e01fa0f5da8d8f727 875 SUPERFAMILY SSF53448 278 553 5.77E-53 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YE4074 28df197a72d14d8e01fa0f5da8d8f727 875 Pfam PF07238 PilZ domain 697 793 1.8E-9 T 22-04-2016 IPR009875 PilZ domain GO:0035438 YE4074 28df197a72d14d8e01fa0f5da8d8f727 875 Gene3D G3DSA:3.90.550.10 278 511 1.5E-24 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YE4074 28df197a72d14d8e01fa0f5da8d8f727 875 SUPERFAMILY SSF141371 699 786 7.26E-7 T 22-04-2016 YE4074 28df197a72d14d8e01fa0f5da8d8f727 875 Pfam PF03552 Cellulose synthase 454 574 3.1E-12 T 22-04-2016 IPR005150 Cellulose synthase GO:0016020|GO:0016760|GO:0030244 YE4074 28df197a72d14d8e01fa0f5da8d8f727 875 TIGRFAM TIGR03030 CelA: cellulose synthase catalytic subunit (UDP-forming) 150 832 1.4E-288 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 YE4074 28df197a72d14d8e01fa0f5da8d8f727 875 PANTHER PTHR10587 182 717 3.5E-126 T 22-04-2016 YE4074 28df197a72d14d8e01fa0f5da8d8f727 875 PANTHER PTHR10587:SF94 182 717 3.5E-126 T 22-04-2016 YE4074 28df197a72d14d8e01fa0f5da8d8f727 875 PRINTS PR01439 Cellulose synthase subunit A signature 556 575 4.4E-58 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 YE4074 28df197a72d14d8e01fa0f5da8d8f727 875 PRINTS PR01439 Cellulose synthase subunit A signature 527 553 4.4E-58 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 YE4074 28df197a72d14d8e01fa0f5da8d8f727 875 PRINTS PR01439 Cellulose synthase subunit A signature 596 615 4.4E-58 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 YE4074 28df197a72d14d8e01fa0f5da8d8f727 875 PRINTS PR01439 Cellulose synthase subunit A signature 230 255 4.4E-58 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 YE4074 28df197a72d14d8e01fa0f5da8d8f727 875 PRINTS PR01439 Cellulose synthase subunit A signature 366 390 4.4E-58 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 YE4074 28df197a72d14d8e01fa0f5da8d8f727 875 PRINTS PR01439 Cellulose synthase subunit A signature 202 222 4.4E-58 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 YE4074 28df197a72d14d8e01fa0f5da8d8f727 875 PRINTS PR01439 Cellulose synthase subunit A signature 670 691 4.4E-58 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 YE4074 28df197a72d14d8e01fa0f5da8d8f727 875 PRINTS PR01439 Cellulose synthase subunit A signature 285 304 4.4E-58 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 YE0860 d3188bf7f202dfc9d32aeffae91c63c1 222 Pfam PF12961 Domain of Unknown Function with PDB structure (DUF3850) 140 212 1.9E-22 T 22-04-2016 YE0860 d3188bf7f202dfc9d32aeffae91c63c1 222 SMART SM01022 142 217 1.5E-4 T 22-04-2016 IPR007374 ASCH domain YE0860 d3188bf7f202dfc9d32aeffae91c63c1 222 SUPERFAMILY SSF88697 139 202 3.11E-12 T 22-04-2016 IPR015947 PUA-like domain YE0860 d3188bf7f202dfc9d32aeffae91c63c1 222 Gene3D G3DSA:3.10.480.10 139 201 9.2E-9 T 22-04-2016 YE1278 2c973360125f0aa266a3ddf19cb9167c 163 PANTHER PTHR23029 1 77 1.7E-20 T 22-04-2016 YE1278 2c973360125f0aa266a3ddf19cb9167c 163 PANTHER PTHR23029 127 156 1.7E-20 T 22-04-2016 YE1278 2c973360125f0aa266a3ddf19cb9167c 163 Gene3D G3DSA:3.40.50.1240 1 156 4.4E-40 T 22-04-2016 IPR029033 Histidine phosphatase superfamily YE1278 2c973360125f0aa266a3ddf19cb9167c 163 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 73 3.8E-7 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 YE1278 2c973360125f0aa266a3ddf19cb9167c 163 SUPERFAMILY SSF53254 1 143 1.28E-17 T 22-04-2016 IPR029033 Histidine phosphatase superfamily YE1278 2c973360125f0aa266a3ddf19cb9167c 163 PANTHER PTHR23029:SF49 1 77 1.7E-20 T 22-04-2016 YE1278 2c973360125f0aa266a3ddf19cb9167c 163 PANTHER PTHR23029:SF49 127 156 1.7E-20 T 22-04-2016 YE1278 2c973360125f0aa266a3ddf19cb9167c 163 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 153 9.0E-50 T 22-04-2016 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0008969 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- YE0924 55a8402ece79b7c8bec0c2dc19e64b87 393 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 200 365 1.1E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE0924 55a8402ece79b7c8bec0c2dc19e64b87 393 PANTHER PTHR30177:SF2 97 381 1.5E-141 T 22-04-2016 YE0924 55a8402ece79b7c8bec0c2dc19e64b87 393 PANTHER PTHR30177 97 381 1.5E-141 T 22-04-2016 YE0924 55a8402ece79b7c8bec0c2dc19e64b87 393 Gene3D G3DSA:1.10.3720.10 176 362 6.6E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE0924 55a8402ece79b7c8bec0c2dc19e64b87 393 SUPERFAMILY SSF161098 179 361 6.93E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE4151 0c9edee812f6284a9f40aa1195d0f231 304 Gene3D G3DSA:3.30.930.10 4 213 2.3E-105 T 22-04-2016 YE4151 0c9edee812f6284a9f40aa1195d0f231 304 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 291 7.8E-149 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YE4151 0c9edee812f6284a9f40aa1195d0f231 304 PANTHER PTHR30075 1 304 5.8E-280 T 22-04-2016 YE4151 0c9edee812f6284a9f40aa1195d0f231 304 SUPERFAMILY SSF55681 8 292 1.12E-133 T 22-04-2016 YE4151 0c9edee812f6284a9f40aa1195d0f231 304 Gene3D G3DSA:1.20.58.180 215 298 1.2E-36 T 22-04-2016 YE4151 0c9edee812f6284a9f40aa1195d0f231 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 4.1E-71 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YE4151 0c9edee812f6284a9f40aa1195d0f231 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 4.1E-71 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YE4151 0c9edee812f6284a9f40aa1195d0f231 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 4.1E-71 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YE4151 0c9edee812f6284a9f40aa1195d0f231 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 253 269 4.1E-71 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YE4151 0c9edee812f6284a9f40aa1195d0f231 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 4.1E-71 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YE4151 0c9edee812f6284a9f40aa1195d0f231 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 4.1E-71 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YE4151 0c9edee812f6284a9f40aa1195d0f231 304 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 293 62.36 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YE4151 0c9edee812f6284a9f40aa1195d0f231 304 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 301 5.9E-174 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 YE2919 7d3df2aab457c078d7da2139db2cd0d9 383 Pfam PF08544 GHMP kinases C terminal 279 361 1.0E-10 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain YE2919 7d3df2aab457c078d7da2139db2cd0d9 383 Hamap MF_00246 Galactokinase [galK]. 25 382 42.632 T 22-04-2016 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YE2919 7d3df2aab457c078d7da2139db2cd0d9 383 PANTHER PTHR10457:SF6 2 381 9.0E-150 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YE2919 7d3df2aab457c078d7da2139db2cd0d9 383 TIGRFAM TIGR00131 gal_kin: galactokinase 5 383 8.3E-154 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YE2919 7d3df2aab457c078d7da2139db2cd0d9 383 Pfam PF10509 Galactokinase galactose-binding signature 11 57 7.9E-22 T 22-04-2016 IPR019539 Galactokinase galactose-binding domain KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YE2919 7d3df2aab457c078d7da2139db2cd0d9 383 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 121 132 - T 22-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 YE2919 7d3df2aab457c078d7da2139db2cd0d9 383 PRINTS PR00959 Mevalonate kinase family signature 119 141 4.0E-46 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YE2919 7d3df2aab457c078d7da2139db2cd0d9 383 PRINTS PR00959 Mevalonate kinase family signature 328 345 4.0E-46 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YE2919 7d3df2aab457c078d7da2139db2cd0d9 383 PRINTS PR00959 Mevalonate kinase family signature 25 49 4.0E-46 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YE2919 7d3df2aab457c078d7da2139db2cd0d9 383 PRINTS PR00959 Mevalonate kinase family signature 162 181 4.0E-46 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YE2919 7d3df2aab457c078d7da2139db2cd0d9 383 Gene3D G3DSA:3.30.230.10 5 207 5.7E-78 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YE2919 7d3df2aab457c078d7da2139db2cd0d9 383 PANTHER PTHR10457 2 381 9.0E-150 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YE2919 7d3df2aab457c078d7da2139db2cd0d9 383 SUPERFAMILY SSF55060 205 381 5.76E-54 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain YE2919 7d3df2aab457c078d7da2139db2cd0d9 383 SUPERFAMILY SSF54211 3 203 1.06E-63 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YE2919 7d3df2aab457c078d7da2139db2cd0d9 383 Gene3D G3DSA:3.30.70.890 208 381 7.3E-59 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain YE2919 7d3df2aab457c078d7da2139db2cd0d9 383 ProSitePatterns PS00106 Galactokinase signature. 27 38 - T 22-04-2016 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YE2919 7d3df2aab457c078d7da2139db2cd0d9 383 PIRSF PIRSF000530 1 383 1.3E-119 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YE2919 7d3df2aab457c078d7da2139db2cd0d9 383 PRINTS PR00473 Galactokinase signature 27 45 2.5E-29 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YE2919 7d3df2aab457c078d7da2139db2cd0d9 383 PRINTS PR00473 Galactokinase signature 92 103 2.5E-29 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YE2919 7d3df2aab457c078d7da2139db2cd0d9 383 PRINTS PR00473 Galactokinase signature 263 277 2.5E-29 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YE2919 7d3df2aab457c078d7da2139db2cd0d9 383 PRINTS PR00473 Galactokinase signature 112 130 2.5E-29 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 YE2919 7d3df2aab457c078d7da2139db2cd0d9 383 Pfam PF00288 GHMP kinases N terminal domain 115 181 5.5E-15 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 YE3310 e109dba7f2df04d47f1cc7c8e80fbc4e 1209 PANTHER PTHR11070:SF23 300 772 0.0 T 22-04-2016 YE3310 e109dba7f2df04d47f1cc7c8e80fbc4e 1209 PANTHER PTHR11070:SF23 119 216 0.0 T 22-04-2016 YE3310 e109dba7f2df04d47f1cc7c8e80fbc4e 1209 PANTHER PTHR11070:SF23 1 90 0.0 T 22-04-2016 YE3310 e109dba7f2df04d47f1cc7c8e80fbc4e 1209 PANTHER PTHR11070:SF23 794 1181 0.0 T 22-04-2016 YE3310 e109dba7f2df04d47f1cc7c8e80fbc4e 1209 SUPERFAMILY SSF52540 119 203 2.57E-109 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3310 e109dba7f2df04d47f1cc7c8e80fbc4e 1209 SUPERFAMILY SSF52540 4 81 2.57E-109 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3310 e109dba7f2df04d47f1cc7c8e80fbc4e 1209 SUPERFAMILY SSF52540 325 819 2.57E-109 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3310 e109dba7f2df04d47f1cc7c8e80fbc4e 1209 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 9 1185 0.0 T 22-04-2016 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 YE3310 e109dba7f2df04d47f1cc7c8e80fbc4e 1209 Gene3D G3DSA:1.10.3170.10 156 349 2.9E-66 T 22-04-2016 YE3310 e109dba7f2df04d47f1cc7c8e80fbc4e 1209 Gene3D G3DSA:1.10.486.10 583 728 1.6E-57 T 22-04-2016 YE3310 e109dba7f2df04d47f1cc7c8e80fbc4e 1209 Gene3D G3DSA:3.90.320.10 893 1189 1.0E-105 T 22-04-2016 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 YE3310 e109dba7f2df04d47f1cc7c8e80fbc4e 1209 SUPERFAMILY SSF52980 904 1187 4.4E-93 T 22-04-2016 IPR011335 Restriction endonuclease type II-like YE3310 e109dba7f2df04d47f1cc7c8e80fbc4e 1209 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 6 1186 15.277 T 22-04-2016 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 YE3310 e109dba7f2df04d47f1cc7c8e80fbc4e 1209 Gene3D G3DSA:3.40.50.300 729 865 8.9E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3310 e109dba7f2df04d47f1cc7c8e80fbc4e 1209 Gene3D G3DSA:3.40.50.300 449 580 8.9E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3310 e109dba7f2df04d47f1cc7c8e80fbc4e 1209 Pfam PF13361 UvrD-like helicase C-terminal domain 530 809 4.5E-19 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 YE3310 e109dba7f2df04d47f1cc7c8e80fbc4e 1209 Gene3D G3DSA:3.40.50.300 3 83 5.5E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3310 e109dba7f2df04d47f1cc7c8e80fbc4e 1209 Gene3D G3DSA:3.40.50.300 121 150 5.5E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3310 e109dba7f2df04d47f1cc7c8e80fbc4e 1209 Gene3D G3DSA:3.40.50.300 350 448 5.5E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3310 e109dba7f2df04d47f1cc7c8e80fbc4e 1209 PANTHER PTHR11070 300 772 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 YE3310 e109dba7f2df04d47f1cc7c8e80fbc4e 1209 PANTHER PTHR11070 119 216 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 YE3310 e109dba7f2df04d47f1cc7c8e80fbc4e 1209 PANTHER PTHR11070 1 90 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 YE3310 e109dba7f2df04d47f1cc7c8e80fbc4e 1209 PANTHER PTHR11070 794 1181 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 YE3310 e109dba7f2df04d47f1cc7c8e80fbc4e 1209 Pfam PF00580 UvrD/REP helicase N-terminal domain 4 436 1.3E-60 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 YE0089 88be7c2f0bc21be22edc8ae239f2b83e 331 PANTHER PTHR13697 3 285 5.6E-129 T 22-04-2016 YE0089 88be7c2f0bc21be22edc8ae239f2b83e 331 PANTHER PTHR13697:SF4 3 285 5.6E-129 T 22-04-2016 YE0089 88be7c2f0bc21be22edc8ae239f2b83e 331 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 4 305 1.8E-120 T 22-04-2016 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 YE0089 88be7c2f0bc21be22edc8ae239f2b83e 331 Pfam PF00365 Phosphofructokinase 4 277 7.7E-107 T 22-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 YE0089 88be7c2f0bc21be22edc8ae239f2b83e 331 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 160 176 1.6E-81 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 YE0089 88be7c2f0bc21be22edc8ae239f2b83e 331 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 122 139 1.6E-81 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 YE0089 88be7c2f0bc21be22edc8ae239f2b83e 331 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 214 226 1.6E-81 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 YE0089 88be7c2f0bc21be22edc8ae239f2b83e 331 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 32 45 1.6E-81 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 YE0089 88be7c2f0bc21be22edc8ae239f2b83e 331 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 140 158 1.6E-81 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 YE0089 88be7c2f0bc21be22edc8ae239f2b83e 331 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 1.6E-81 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 YE0089 88be7c2f0bc21be22edc8ae239f2b83e 331 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 241 263 1.6E-81 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 YE0089 88be7c2f0bc21be22edc8ae239f2b83e 331 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 1.6E-81 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 YE0089 88be7c2f0bc21be22edc8ae239f2b83e 331 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 178 195 1.6E-81 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 YE0089 88be7c2f0bc21be22edc8ae239f2b83e 331 ProSitePatterns PS00433 Phosphofructokinase signature. 245 263 - T 22-04-2016 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 YE0089 88be7c2f0bc21be22edc8ae239f2b83e 331 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 2 331 45.091 T 22-04-2016 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 YE0089 88be7c2f0bc21be22edc8ae239f2b83e 331 SUPERFAMILY SSF53784 3 319 5.1E-108 T 22-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 YE0089 88be7c2f0bc21be22edc8ae239f2b83e 331 PIRSF PIRSF000532 1 331 3.5E-123 T 22-04-2016 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 YE0089 88be7c2f0bc21be22edc8ae239f2b83e 331 Gene3D G3DSA:3.40.50.450 3 216 7.2E-76 T 22-04-2016 YE0593 c28faf3ef9b4a6ad77442a9c9224d980 288 Gene3D G3DSA:1.10.10.60 58 119 3.0E-24 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE0593 c28faf3ef9b4a6ad77442a9c9224d980 288 PANTHER PTHR11019 5 112 1.8E-67 T 22-04-2016 YE0593 c28faf3ef9b4a6ad77442a9c9224d980 288 SUPERFAMILY SSF46689 6 55 6.72E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE0593 c28faf3ef9b4a6ad77442a9c9224d980 288 Pfam PF12833 Helix-turn-helix domain 27 105 1.5E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YE0593 c28faf3ef9b4a6ad77442a9c9224d980 288 PANTHER PTHR11019:SF84 5 112 1.8E-67 T 22-04-2016 YE0593 c28faf3ef9b4a6ad77442a9c9224d980 288 SMART SM00871 126 287 2.2E-20 T 22-04-2016 IPR010499 Bacterial transcription activator, effector binding YE0593 c28faf3ef9b4a6ad77442a9c9224d980 288 Pfam PF06445 GyrI-like small molecule binding domain 127 287 3.6E-25 T 22-04-2016 IPR029442 GyrI-like small molecule binding domain YE0593 c28faf3ef9b4a6ad77442a9c9224d980 288 Gene3D G3DSA:1.10.10.60 2 57 7.2E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE0593 c28faf3ef9b4a6ad77442a9c9224d980 288 SUPERFAMILY SSF55136 122 287 1.92E-56 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain YE0593 c28faf3ef9b4a6ad77442a9c9224d980 288 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 4.3E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YE0593 c28faf3ef9b4a6ad77442a9c9224d980 288 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 4.3E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YE0593 c28faf3ef9b4a6ad77442a9c9224d980 288 Gene3D G3DSA:3.20.80.10 124 288 3.7E-61 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain YE0593 c28faf3ef9b4a6ad77442a9c9224d980 288 SUPERFAMILY SSF46689 57 107 5.82E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE0593 c28faf3ef9b4a6ad77442a9c9224d980 288 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 55 100 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 YE0593 c28faf3ef9b4a6ad77442a9c9224d980 288 SMART SM00342 21 104 3.0E-31 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YE3118 a5b2b38e69a56898dc77ab0d1bd3f274 287 PANTHER PTHR11066 1 286 1.2E-119 T 22-04-2016 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 YE3118 a5b2b38e69a56898dc77ab0d1bd3f274 287 SUPERFAMILY SSF54637 116 283 8.53E-62 T 22-04-2016 IPR029069 HotDog domain YE3118 a5b2b38e69a56898dc77ab0d1bd3f274 287 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 13 283 5.4E-102 T 22-04-2016 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 YE3118 a5b2b38e69a56898dc77ab0d1bd3f274 287 Gene3D G3DSA:3.10.129.10 5 116 3.9E-49 T 22-04-2016 IPR029069 HotDog domain YE3118 a5b2b38e69a56898dc77ab0d1bd3f274 287 Gene3D G3DSA:3.10.129.10 124 285 7.9E-59 T 22-04-2016 IPR029069 HotDog domain YE3118 a5b2b38e69a56898dc77ab0d1bd3f274 287 SUPERFAMILY SSF54637 6 114 2.44E-41 T 22-04-2016 IPR029069 HotDog domain YE3118 a5b2b38e69a56898dc77ab0d1bd3f274 287 Pfam PF13622 Thioesterase-like superfamily 32 282 3.3E-59 T 22-04-2016 YE3118 a5b2b38e69a56898dc77ab0d1bd3f274 287 PANTHER PTHR11066:SF34 1 286 1.2E-119 T 22-04-2016 YE4043 3b8c592f97d95e1ce9ac25938455ebdf 414 PIRSF PIRSF017107 1 413 7.6E-221 T 22-04-2016 IPR006395 Methylaspartate ammonia-lyase GO:0050096 KEGG: 00630+4.3.1.2|KEGG: 00660+4.3.1.2|MetaCyc: PWY-5087|MetaCyc: PWY-6728|UniPathway: UPA00561 YE4043 3b8c592f97d95e1ce9ac25938455ebdf 414 Gene3D G3DSA:3.20.20.120 166 411 7.1E-72 T 22-04-2016 IPR029065 Enolase C-terminal domain-like YE4043 3b8c592f97d95e1ce9ac25938455ebdf 414 SUPERFAMILY SSF54826 1 159 4.16E-58 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YE4043 3b8c592f97d95e1ce9ac25938455ebdf 414 Pfam PF05034 Methylaspartate ammonia-lyase N-terminus 1 159 8.1E-71 T 22-04-2016 IPR022665 Methylaspartate ammonia-lyase, N-terminal KEGG: 00630+4.3.1.2|KEGG: 00660+4.3.1.2|MetaCyc: PWY-5087|MetaCyc: PWY-6728|UniPathway: UPA00561 YE4043 3b8c592f97d95e1ce9ac25938455ebdf 414 SUPERFAMILY SSF51604 164 411 2.1E-76 T 22-04-2016 IPR029065 Enolase C-terminal domain-like YE4043 3b8c592f97d95e1ce9ac25938455ebdf 414 PANTHER PTHR13794 12 184 2.5E-90 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 YE4043 3b8c592f97d95e1ce9ac25938455ebdf 414 PANTHER PTHR13794 203 406 2.5E-90 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 YE4043 3b8c592f97d95e1ce9ac25938455ebdf 414 Pfam PF07476 Methylaspartate ammonia-lyase C-terminus 162 409 1.8E-115 T 22-04-2016 IPR022662 Methylaspartate ammonia-lyase, C-terminal KEGG: 00630+4.3.1.2|KEGG: 00660+4.3.1.2|MetaCyc: PWY-5087|MetaCyc: PWY-6728|UniPathway: UPA00561 YE4043 3b8c592f97d95e1ce9ac25938455ebdf 414 PANTHER PTHR13794:SF57 12 184 2.5E-90 T 22-04-2016 YE4043 3b8c592f97d95e1ce9ac25938455ebdf 414 PANTHER PTHR13794:SF57 203 406 2.5E-90 T 22-04-2016 YE4043 3b8c592f97d95e1ce9ac25938455ebdf 414 Gene3D G3DSA:3.30.390.10 1 163 2.6E-78 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YE4043 3b8c592f97d95e1ce9ac25938455ebdf 414 TIGRFAM TIGR01502 B_methylAsp_ase: methylaspartate ammonia-lyase 2 411 2.6E-161 T 22-04-2016 IPR006395 Methylaspartate ammonia-lyase GO:0050096 KEGG: 00630+4.3.1.2|KEGG: 00660+4.3.1.2|MetaCyc: PWY-5087|MetaCyc: PWY-6728|UniPathway: UPA00561 YE0346 4346437f31f6b056e8c1d3e6ee5a0f80 191 Gene3D G3DSA:1.10.357.10 3 181 3.3E-20 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 YE0346 4346437f31f6b056e8c1d3e6ee5a0f80 191 PANTHER PTHR30055 3 191 8.9E-36 T 22-04-2016 YE0346 4346437f31f6b056e8c1d3e6ee5a0f80 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 49 8.2E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YE0346 4346437f31f6b056e8c1d3e6ee5a0f80 191 PANTHER PTHR30055:SF92 3 191 8.9E-36 T 22-04-2016 YE0346 4346437f31f6b056e8c1d3e6ee5a0f80 191 SUPERFAMILY SSF46689 2 66 4.31E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE0346 4346437f31f6b056e8c1d3e6ee5a0f80 191 SUPERFAMILY SSF48498 74 175 6.38E-5 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal YE4211 fb7786ab362cf67342a12597eb194d21 79 Gene3D G3DSA:1.20.20.10 2 77 3.0E-31 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 YE4211 fb7786ab362cf67342a12597eb194d21 79 ProSitePatterns PS00605 ATP synthase c subunit signature. 40 61 - T 22-04-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site YE4211 fb7786ab362cf67342a12597eb194d21 79 PRINTS PR00124 ATP synthase C subunit signature 50 75 2.1E-8 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 YE4211 fb7786ab362cf67342a12597eb194d21 79 PRINTS PR00124 ATP synthase C subunit signature 12 31 2.1E-8 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 YE4211 fb7786ab362cf67342a12597eb194d21 79 PRINTS PR00124 ATP synthase C subunit signature 33 48 2.1E-8 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 YE4211 fb7786ab362cf67342a12597eb194d21 79 SUPERFAMILY SSF81333 3 77 2.75E-18 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 YE4211 fb7786ab362cf67342a12597eb194d21 79 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 77 14.423 T 22-04-2016 YE4211 fb7786ab362cf67342a12597eb194d21 79 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 77 1.9E-31 T 22-04-2016 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 YE4211 fb7786ab362cf67342a12597eb194d21 79 Pfam PF00137 ATP synthase subunit C 11 69 1.0E-9 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 YE3819 11dea6f4ad1461358e368198a014a276 156 Pfam PF05433 Glycine zipper 2TM domain 62 102 9.5E-6 T 22-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 YE3819 11dea6f4ad1461358e368198a014a276 156 PANTHER PTHR35603 1 156 1.2E-42 T 22-04-2016 YE3739 c206ae6b38332c83b0db9f88ebbabdad 213 SUPERFAMILY SSF47616 82 208 2.84E-27 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like YE3739 c206ae6b38332c83b0db9f88ebbabdad 213 Gene3D G3DSA:3.40.30.10 7 101 2.7E-29 T 22-04-2016 IPR012336 Thioredoxin-like fold YE3739 c206ae6b38332c83b0db9f88ebbabdad 213 Gene3D G3DSA:1.20.1050.10 102 208 5.3E-17 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like YE3739 c206ae6b38332c83b0db9f88ebbabdad 213 Pfam PF00043 Glutathione S-transferase, C-terminal domain 102 194 1.2E-12 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal YE3739 c206ae6b38332c83b0db9f88ebbabdad 213 PANTHER PTHR11260 9 208 8.5E-129 T 22-04-2016 YE3739 c206ae6b38332c83b0db9f88ebbabdad 213 SUPERFAMILY SSF52833 11 110 1.39E-22 T 22-04-2016 IPR012336 Thioredoxin-like fold YE3739 c206ae6b38332c83b0db9f88ebbabdad 213 PANTHER PTHR11260:SF44 9 208 8.5E-129 T 22-04-2016 YE3739 c206ae6b38332c83b0db9f88ebbabdad 213 Pfam PF02798 Glutathione S-transferase, N-terminal domain 10 81 1.4E-17 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 YE0440 f9962e62b73191789f8d19646fd3ae2f 657 Gene3D G3DSA:3.40.50.300 6 208 3.8E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0440 f9962e62b73191789f8d19646fd3ae2f 657 Pfam PF00270 DEAD/DEAH box helicase 32 196 1.2E-50 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YE0440 f9962e62b73191789f8d19646fd3ae2f 657 SMART SM00487 26 224 7.2E-65 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain YE0440 f9962e62b73191789f8d19646fd3ae2f 657 SMART SM00490 260 341 6.3E-32 T 22-04-2016 IPR001650 Helicase, C-terminal YE0440 f9962e62b73191789f8d19646fd3ae2f 657 Pfam PF00271 Helicase conserved C-terminal domain 233 341 6.4E-29 T 22-04-2016 IPR001650 Helicase, C-terminal YE0440 f9962e62b73191789f8d19646fd3ae2f 657 PANTHER PTHR24031 539 656 4.5E-270 T 22-04-2016 YE0440 f9962e62b73191789f8d19646fd3ae2f 657 PANTHER PTHR24031 7 462 4.5E-270 T 22-04-2016 YE0440 f9962e62b73191789f8d19646fd3ae2f 657 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site YE0440 f9962e62b73191789f8d19646fd3ae2f 657 SUPERFAMILY SSF52540 75 362 4.9E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0440 f9962e62b73191789f8d19646fd3ae2f 657 Pfam PF12343 Cold shock protein DEAD box A 584 657 2.8E-17 T 22-04-2016 IPR021046 Cold-shock protein, DEAD box A, C-terminal GO:0016817 YE0440 f9962e62b73191789f8d19646fd3ae2f 657 PANTHER PTHR24031:SF261 539 656 4.5E-270 T 22-04-2016 YE0440 f9962e62b73191789f8d19646fd3ae2f 657 PANTHER PTHR24031:SF261 7 462 4.5E-270 T 22-04-2016 YE0440 f9962e62b73191789f8d19646fd3ae2f 657 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 2 567 46.893 T 22-04-2016 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 YE0440 f9962e62b73191789f8d19646fd3ae2f 657 Pfam PF03880 DbpA RNA binding domain 496 565 1.6E-19 T 22-04-2016 IPR005580 DbpA, RNA-binding domain YE0440 f9962e62b73191789f8d19646fd3ae2f 657 Gene3D G3DSA:3.40.50.300 209 375 1.2E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1556 80a5704a295e3fa6e6728a748cfcddea 1481 SUPERFAMILY SSF52540 1268 1433 4.46E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1556 80a5704a295e3fa6e6728a748cfcddea 1481 SUPERFAMILY SSF52540 21 55 4.46E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1556 80a5704a295e3fa6e6728a748cfcddea 1481 SUPERFAMILY SSF52540 22 224 8.77E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1556 80a5704a295e3fa6e6728a748cfcddea 1481 Pfam PF16330 MukB hinge domain 645 810 9.6E-74 T 22-04-2016 IPR032520 MukB, hinge domain YE1556 80a5704a295e3fa6e6728a748cfcddea 1481 Pfam PF04310 MukB N-terminal 2 227 3.8E-124 T 22-04-2016 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 YE1556 80a5704a295e3fa6e6728a748cfcddea 1481 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1336 1424 4.1E-15 T 22-04-2016 YE1556 80a5704a295e3fa6e6728a748cfcddea 1481 Hamap MF_01800 Chromosome partition protein MukB [mukB]. 1 1471 11.077 T 22-04-2016 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 YE1556 80a5704a295e3fa6e6728a748cfcddea 1481 PANTHER PTHR18937 847 878 0.0 T 22-04-2016 YE1556 80a5704a295e3fa6e6728a748cfcddea 1481 PANTHER PTHR18937 981 1116 0.0 T 22-04-2016 YE1556 80a5704a295e3fa6e6728a748cfcddea 1481 PANTHER PTHR18937 1426 1459 0.0 T 22-04-2016 YE1556 80a5704a295e3fa6e6728a748cfcddea 1481 PANTHER PTHR18937 560 814 0.0 T 22-04-2016 YE1556 80a5704a295e3fa6e6728a748cfcddea 1481 PANTHER PTHR18937 99 426 0.0 T 22-04-2016 YE1556 80a5704a295e3fa6e6728a748cfcddea 1481 PANTHER PTHR18937 897 938 0.0 T 22-04-2016 YE1556 80a5704a295e3fa6e6728a748cfcddea 1481 PANTHER PTHR18937 444 529 0.0 T 22-04-2016 YE1556 80a5704a295e3fa6e6728a748cfcddea 1481 PANTHER PTHR18937 1212 1248 0.0 T 22-04-2016 YE1556 80a5704a295e3fa6e6728a748cfcddea 1481 PANTHER PTHR18937:SF201 847 878 0.0 T 22-04-2016 YE1556 80a5704a295e3fa6e6728a748cfcddea 1481 PANTHER PTHR18937:SF201 981 1116 0.0 T 22-04-2016 YE1556 80a5704a295e3fa6e6728a748cfcddea 1481 PANTHER PTHR18937:SF201 1426 1459 0.0 T 22-04-2016 YE1556 80a5704a295e3fa6e6728a748cfcddea 1481 PANTHER PTHR18937:SF201 560 814 0.0 T 22-04-2016 YE1556 80a5704a295e3fa6e6728a748cfcddea 1481 PANTHER PTHR18937:SF201 99 426 0.0 T 22-04-2016 YE1556 80a5704a295e3fa6e6728a748cfcddea 1481 PANTHER PTHR18937:SF201 897 938 0.0 T 22-04-2016 YE1556 80a5704a295e3fa6e6728a748cfcddea 1481 PANTHER PTHR18937:SF201 444 529 0.0 T 22-04-2016 YE1556 80a5704a295e3fa6e6728a748cfcddea 1481 PANTHER PTHR18937:SF201 1212 1248 0.0 T 22-04-2016 YE1556 80a5704a295e3fa6e6728a748cfcddea 1481 PIRSF PIRSF005246 1 1478 0.0 T 22-04-2016 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 YE1556 80a5704a295e3fa6e6728a748cfcddea 1481 Gene3D G3DSA:3.40.1140.10 1 226 1.0E-51 T 22-04-2016 YE1039 1e929a88e07fba04ea99e462ea391b5c 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 22-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 YE1039 1e929a88e07fba04ea99e462ea391b5c 112 SMART SM00938 4 105 9.7E-69 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YE1039 1e929a88e07fba04ea99e462ea391b5c 112 SUPERFAMILY SSF54913 1 112 5.4E-47 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta YE1039 1e929a88e07fba04ea99e462ea391b5c 112 PRINTS PR00340 P-II protein signature 83 103 1.2E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YE1039 1e929a88e07fba04ea99e462ea391b5c 112 PRINTS PR00340 P-II protein signature 52 75 1.2E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YE1039 1e929a88e07fba04ea99e462ea391b5c 112 PRINTS PR00340 P-II protein signature 2 17 1.2E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YE1039 1e929a88e07fba04ea99e462ea391b5c 112 PRINTS PR00340 P-II protein signature 23 41 1.2E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YE1039 1e929a88e07fba04ea99e462ea391b5c 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 22-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 YE1039 1e929a88e07fba04ea99e462ea391b5c 112 Gene3D G3DSA:3.30.70.120 1 112 9.7E-52 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal YE1039 1e929a88e07fba04ea99e462ea391b5c 112 PIRSF PIRSF039144 1 112 3.7E-58 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YE1039 1e929a88e07fba04ea99e462ea391b5c 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.3E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 YE1039 1e929a88e07fba04ea99e462ea391b5c 112 PANTHER PTHR30115 1 112 6.0E-68 T 22-04-2016 YE3590 555584c1080dab2f779b1f97a40822d5 356 SUPERFAMILY SSF53590 2 322 3.79E-70 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain YE3590 555584c1080dab2f779b1f97a40822d5 356 PANTHER PTHR12304 1 345 2.3E-68 T 22-04-2016 IPR023186 Inosine/uridine-preferring nucleoside hydrolase YE3590 555584c1080dab2f779b1f97a40822d5 356 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 2 316 4.1E-52 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain YE3590 555584c1080dab2f779b1f97a40822d5 356 Gene3D G3DSA:3.90.245.10 2 325 8.3E-78 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain YE0159 7d2985ff8156bce5d0662529945fd351 739 PANTHER PTHR30451:SF7 1 434 0.0 T 22-04-2016 YE0159 7d2985ff8156bce5d0662529945fd351 739 PANTHER PTHR30451:SF7 454 739 0.0 T 22-04-2016 YE0159 7d2985ff8156bce5d0662529945fd351 739 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 188 198 - T 22-04-2016 IPR018030 Fimbrial membrane usher, conserved site YE0159 7d2985ff8156bce5d0662529945fd351 739 SUPERFAMILY SSF141729 2 44 1.96E-10 T 22-04-2016 YE0159 7d2985ff8156bce5d0662529945fd351 739 PANTHER PTHR30451 1 434 0.0 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YE0159 7d2985ff8156bce5d0662529945fd351 739 PANTHER PTHR30451 454 739 0.0 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YE0159 7d2985ff8156bce5d0662529945fd351 739 Pfam PF13953 PapC C-terminal domain 658 721 4.3E-18 T 22-04-2016 IPR025949 PapC-like, C-terminal domain YE0159 7d2985ff8156bce5d0662529945fd351 739 Pfam PF13954 PapC N-terminal domain 2 55 2.8E-16 T 22-04-2016 IPR025885 PapC, N-terminal domain GO:0005515 YE0159 7d2985ff8156bce5d0662529945fd351 739 Pfam PF00577 Outer membrane usher protein 75 649 3.0E-148 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YE1037 05af5c3f62852a74c898b5fdedd06853 445 SUPERFAMILY SSF46689 388 438 1.08E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE1037 05af5c3f62852a74c898b5fdedd06853 445 SMART SM00382 157 300 3.7E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain YE1037 05af5c3f62852a74c898b5fdedd06853 445 Gene3D G3DSA:3.40.50.300 135 308 1.3E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1037 05af5c3f62852a74c898b5fdedd06853 445 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 223 238 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YE1037 05af5c3f62852a74c898b5fdedd06853 445 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 161 174 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YE1037 05af5c3f62852a74c898b5fdedd06853 445 Gene3D G3DSA:3.40.50.2300 4 123 4.1E-37 T 22-04-2016 YE1037 05af5c3f62852a74c898b5fdedd06853 445 PANTHER PTHR32071 1 445 5.3E-259 T 22-04-2016 YE1037 05af5c3f62852a74c898b5fdedd06853 445 SUPERFAMILY SSF52172 6 181 2.42E-43 T 22-04-2016 IPR011006 CheY-like superfamily YE1037 05af5c3f62852a74c898b5fdedd06853 445 SUPERFAMILY SSF52540 136 381 3.33E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1037 05af5c3f62852a74c898b5fdedd06853 445 Pfam PF00072 Response regulator receiver domain 10 118 1.9E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE1037 05af5c3f62852a74c898b5fdedd06853 445 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 350 359 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site YE1037 05af5c3f62852a74c898b5fdedd06853 445 SMART SM00448 7 118 1.1E-34 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE1037 05af5c3f62852a74c898b5fdedd06853 445 Gene3D G3DSA:1.10.10.60 391 438 5.2E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE1037 05af5c3f62852a74c898b5fdedd06853 445 PANTHER PTHR32071:SF5 1 445 5.3E-259 T 22-04-2016 YE1037 05af5c3f62852a74c898b5fdedd06853 445 Gene3D G3DSA:1.10.8.60 310 386 2.4E-22 T 22-04-2016 YE1037 05af5c3f62852a74c898b5fdedd06853 445 Pfam PF00158 Sigma-54 interaction domain 137 303 2.8E-72 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 YE3173 3e8b16076dc7b41e4dca8792287093dc 193 PIRSF PIRSF011489 1 193 3.1E-78 T 22-04-2016 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 YE3173 3e8b16076dc7b41e4dca8792287093dc 193 PANTHER PTHR38764:SF1 2 193 8.6E-88 T 22-04-2016 YE3173 3e8b16076dc7b41e4dca8792287093dc 193 Hamap MF_01950 Acyl carrier protein phosphodiesterase [acpH]. 1 193 56.626 T 22-04-2016 IPR023491 Acyl carrier protein phosphodiesterase, gammaproteobacteria GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 YE3173 3e8b16076dc7b41e4dca8792287093dc 193 PANTHER PTHR38764 2 193 8.6E-88 T 22-04-2016 YE3173 3e8b16076dc7b41e4dca8792287093dc 193 Pfam PF04336 Protein of unknown function, DUF479 81 185 5.5E-31 T 22-04-2016 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 YE0307 5c0670d664e7aa5b61fd3b8fcd815191 551 Hamap MF_01426 Cation/acetate symporter ActP [actP]. 2 551 51.08 T 22-04-2016 IPR014083 Cation/acetate symporter ActP GO:0005887|GO:0015123|GO:0043879 YE0307 5c0670d664e7aa5b61fd3b8fcd815191 551 Pfam PF00474 Sodium:solute symporter family 64 470 9.2E-128 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 YE0307 5c0670d664e7aa5b61fd3b8fcd815191 551 PANTHER PTHR11819:SF13 33 540 1.1E-289 T 22-04-2016 YE0307 5c0670d664e7aa5b61fd3b8fcd815191 551 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 452 472 - T 22-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 YE0307 5c0670d664e7aa5b61fd3b8fcd815191 551 PANTHER PTHR11819 33 540 1.1E-289 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 YE0307 5c0670d664e7aa5b61fd3b8fcd815191 551 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 179 204 - T 22-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 YE0307 5c0670d664e7aa5b61fd3b8fcd815191 551 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 64 468 1.3E-60 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 YE0307 5c0670d664e7aa5b61fd3b8fcd815191 551 TIGRFAM TIGR02711 symport_actP: cation/acetate symporter ActP 4 551 0.0 T 22-04-2016 IPR014083 Cation/acetate symporter ActP GO:0005887|GO:0015123|GO:0043879 YE3938 2bba76418076f63301997697ac428cb8 194 Gene3D G3DSA:3.10.50.40 2 80 5.1E-16 T 22-04-2016 YE3938 2bba76418076f63301997697ac428cb8 194 Gene3D G3DSA:3.10.50.40 126 141 5.1E-16 T 22-04-2016 YE3938 2bba76418076f63301997697ac428cb8 194 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 5 136 9.2E-9 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 YE3938 2bba76418076f63301997697ac428cb8 194 PANTHER PTHR10516 1 83 1.0E-65 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type YE3938 2bba76418076f63301997697ac428cb8 194 PANTHER PTHR10516 129 190 1.0E-65 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type YE3938 2bba76418076f63301997697ac428cb8 194 PANTHER PTHR10516:SF316 1 83 1.0E-65 T 22-04-2016 YE3938 2bba76418076f63301997697ac428cb8 194 PANTHER PTHR10516:SF316 129 190 1.0E-65 T 22-04-2016 YE3938 2bba76418076f63301997697ac428cb8 194 SUPERFAMILY SSF54534 2 140 1.87E-32 T 22-04-2016 YE0724 155b63675e9dabe1f1f582ad0fa39eed 309 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 15 239 6.2E-43 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 YE0724 155b63675e9dabe1f1f582ad0fa39eed 309 PANTHER PTHR11451 1 227 7.9E-117 T 22-04-2016 YE0724 155b63675e9dabe1f1f582ad0fa39eed 309 Gene3D G3DSA:3.40.50.620 178 226 1.9E-39 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YE0724 155b63675e9dabe1f1f582ad0fa39eed 309 Gene3D G3DSA:3.40.50.620 12 77 1.9E-39 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YE0724 155b63675e9dabe1f1f582ad0fa39eed 309 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 12 268 2.1E-110 T 22-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 YE0724 155b63675e9dabe1f1f582ad0fa39eed 309 PRINTS PR00987 Glutamyl-tRNA synthetase signature 192 200 2.3E-14 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 YE0724 155b63675e9dabe1f1f582ad0fa39eed 309 PRINTS PR00987 Glutamyl-tRNA synthetase signature 15 27 2.3E-14 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 YE0724 155b63675e9dabe1f1f582ad0fa39eed 309 PRINTS PR00987 Glutamyl-tRNA synthetase signature 44 57 2.3E-14 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 YE0724 155b63675e9dabe1f1f582ad0fa39eed 309 PRINTS PR00987 Glutamyl-tRNA synthetase signature 29 40 2.3E-14 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 YE0724 155b63675e9dabe1f1f582ad0fa39eed 309 PRINTS PR00987 Glutamyl-tRNA synthetase signature 176 186 2.3E-14 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 YE0724 155b63675e9dabe1f1f582ad0fa39eed 309 SUPERFAMILY SSF52374 12 290 5.33E-84 T 22-04-2016 YE0724 155b63675e9dabe1f1f582ad0fa39eed 309 Gene3D G3DSA:3.90.800.10 78 176 4.3E-15 T 22-04-2016 YE0724 155b63675e9dabe1f1f582ad0fa39eed 309 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 12 296 40.602 T 22-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 YE0724 155b63675e9dabe1f1f582ad0fa39eed 309 PANTHER PTHR11451:SF35 1 227 7.9E-117 T 22-04-2016 YE3413 9e7d2a899b5d789b3d06cdfb60a41c14 359 PANTHER PTHR30559 2 359 8.9E-249 T 22-04-2016 YE3413 9e7d2a899b5d789b3d06cdfb60a41c14 359 Gene3D G3DSA:3.20.20.70 11 355 7.7E-124 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YE3413 9e7d2a899b5d789b3d06cdfb60a41c14 359 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 101 112 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 YE3413 9e7d2a899b5d789b3d06cdfb60a41c14 359 PANTHER PTHR30559:SF0 2 359 8.9E-249 T 22-04-2016 YE3413 9e7d2a899b5d789b3d06cdfb60a41c14 359 PIRSF PIRSF001359 13 359 1.1E-102 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 YE3413 9e7d2a899b5d789b3d06cdfb60a41c14 359 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 172 183 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 YE3413 9e7d2a899b5d789b3d06cdfb60a41c14 359 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 357 2.6E-114 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 YE3413 9e7d2a899b5d789b3d06cdfb60a41c14 359 SUPERFAMILY SSF51569 4 357 1.9E-131 T 22-04-2016 YE3413 9e7d2a899b5d789b3d06cdfb60a41c14 359 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 355 1.3E-88 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 YE3413 9e7d2a899b5d789b3d06cdfb60a41c14 359 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 358 9.3E-190 T 22-04-2016 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 YE2466 e0d04b5ae90efb09053d012fecce53e9 447 Hamap MF_01172 N-succinylarginine dihydrolase [astB]. 1 446 59.078 T 22-04-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23|UniPathway: UPA00185 YE2466 e0d04b5ae90efb09053d012fecce53e9 447 Pfam PF04996 Succinylarginine dihydrolase 4 445 1.2E-216 T 22-04-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23|UniPathway: UPA00185 YE2466 e0d04b5ae90efb09053d012fecce53e9 447 PANTHER PTHR30420:SF2 2 446 0.0 T 22-04-2016 YE2466 e0d04b5ae90efb09053d012fecce53e9 447 Gene3D G3DSA:3.75.10.20 1 446 1.2E-224 T 22-04-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23|UniPathway: UPA00185 YE2466 e0d04b5ae90efb09053d012fecce53e9 447 PANTHER PTHR30420 2 446 0.0 T 22-04-2016 YE2466 e0d04b5ae90efb09053d012fecce53e9 447 SUPERFAMILY SSF55909 4 445 5.4E-202 T 22-04-2016 YE2466 e0d04b5ae90efb09053d012fecce53e9 447 TIGRFAM TIGR03241 arg_catab_astB: succinylarginine dihydrolase 3 445 3.3E-246 T 22-04-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23|UniPathway: UPA00185 YE3999 f22064bdab8533794a5f4ba8d1f6f05d 74 SUPERFAMILY SSF50037 5 70 2.17E-14 T 22-04-2016 IPR008988 Transcriptional repressor, C-terminal YE3999 f22064bdab8533794a5f4ba8d1f6f05d 74 Pfam PF04023 FeoA domain 7 63 1.1E-6 T 22-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 YE3999 f22064bdab8533794a5f4ba8d1f6f05d 74 SMART SM00899 1 72 1.1E-7 T 22-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 YE3999 f22064bdab8533794a5f4ba8d1f6f05d 74 PANTHER PTHR33238 3 74 8.1E-22 T 22-04-2016 YE3388 64dc8793239ef8c160d6859ac1557182 190 PANTHER PTHR20855 1 190 1.6E-59 T 22-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 YE3388 64dc8793239ef8c160d6859ac1557182 190 PANTHER PTHR20855:SF3 1 190 1.6E-59 T 22-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 YE3388 64dc8793239ef8c160d6859ac1557182 190 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 1 190 2.4E-65 T 22-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 YE3388 64dc8793239ef8c160d6859ac1557182 190 Pfam PF03006 Haemolysin-III related 5 183 2.7E-31 T 22-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 YE1464 2820e95637f919934aa9b55549d16ce0 219 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 199 4.3E-48 T 22-04-2016 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial YE1464 2820e95637f919934aa9b55549d16ce0 219 PANTHER PTHR10000 1 213 6.8E-100 T 22-04-2016 YE1464 2820e95637f919934aa9b55549d16ce0 219 PANTHER PTHR10000:SF10 1 213 6.8E-100 T 22-04-2016 YE1464 2820e95637f919934aa9b55549d16ce0 219 Gene3D G3DSA:3.40.50.1000 81 217 5.1E-42 T 22-04-2016 IPR023214 HAD-like domain YE1464 2820e95637f919934aa9b55549d16ce0 219 Gene3D G3DSA:1.20.1440.100 16 80 3.2E-18 T 22-04-2016 YE1464 2820e95637f919934aa9b55549d16ce0 219 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 188 3.3E-26 T 22-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 YE1464 2820e95637f919934aa9b55549d16ce0 219 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 188 3.0E-33 T 22-04-2016 YE1464 2820e95637f919934aa9b55549d16ce0 219 SUPERFAMILY SSF56784 1 214 1.15E-27 T 22-04-2016 IPR023214 HAD-like domain YE2837 71495ac13b64dd4a2c500b9c7ea056f1 295 PANTHER PTHR22911 8 294 7.7E-115 T 22-04-2016 YE2837 71495ac13b64dd4a2c500b9c7ea056f1 295 Pfam PF00892 EamA-like transporter family 150 278 2.8E-15 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YE2837 71495ac13b64dd4a2c500b9c7ea056f1 295 PANTHER PTHR22911:SF37 8 294 7.7E-115 T 22-04-2016 YE2837 71495ac13b64dd4a2c500b9c7ea056f1 295 SUPERFAMILY SSF103481 187 281 7.59E-10 T 22-04-2016 YE0521 7dc06264cb70673be9ed24a5f63580d5 160 Pfam PF10696 Protein of unknown function (DUF2501) 79 157 3.1E-29 T 22-04-2016 IPR019637 Protein of unknown function DUF2501 YE0175 93078da6e945a8e7995dd5808cbfef0d 208 Gene3D G3DSA:3.40.630.30 54 201 5.1E-26 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE0175 93078da6e945a8e7995dd5808cbfef0d 208 TIGRFAM TIGR02382 wecD_rffC: TDP-D-fucosamine acetyltransferase 7 207 3.7E-98 T 22-04-2016 IPR012752 dTDP-fucosamine acetyltransferase WecD GO:0008080|GO:0009246 KEGG: 00071+2.3.1.21|MetaCyc: PWY-6111|MetaCyc: PWY-7315|UniPathway: UPA00566 YE0175 93078da6e945a8e7995dd5808cbfef0d 208 PANTHER PTHR23091 63 201 1.4E-20 T 22-04-2016 YE0175 93078da6e945a8e7995dd5808cbfef0d 208 Hamap MF_02027 dTDP-fucosamine acetyltransferase [wecD]. 7 207 46.609 T 22-04-2016 IPR012752 dTDP-fucosamine acetyltransferase WecD GO:0008080|GO:0009246 KEGG: 00071+2.3.1.21|MetaCyc: PWY-6111|MetaCyc: PWY-7315|UniPathway: UPA00566 YE0175 93078da6e945a8e7995dd5808cbfef0d 208 SUPERFAMILY SSF55729 10 201 2.49E-29 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE0175 93078da6e945a8e7995dd5808cbfef0d 208 Pfam PF00583 Acetyltransferase (GNAT) family 124 195 3.4E-13 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YE0117 3cf0896a2eb8c08e94db0d4b86ce29b7 394 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 10 387 3.2E-151 T 22-04-2016 IPR010169 Acetylornithine deacetylase (ArgE) GO:0005737|GO:0006526|GO:0008270|GO:0008777|GO:0050897 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154|UniPathway: UPA00068 YE0117 3cf0896a2eb8c08e94db0d4b86ce29b7 394 PANTHER PTHR11014:SF75 7 394 4.3E-232 T 22-04-2016 YE0117 3cf0896a2eb8c08e94db0d4b86ce29b7 394 SUPERFAMILY SSF55031 191 306 3.89E-22 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain YE0117 3cf0896a2eb8c08e94db0d4b86ce29b7 394 Pfam PF07687 Peptidase dimerisation domain 188 298 8.0E-26 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain YE0117 3cf0896a2eb8c08e94db0d4b86ce29b7 394 Hamap MF_01108 Acetylornithine deacetylase [argE]. 3 392 65.068 T 22-04-2016 IPR010169 Acetylornithine deacetylase (ArgE) GO:0005737|GO:0006526|GO:0008270|GO:0008777|GO:0050897 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154|UniPathway: UPA00068 YE0117 3cf0896a2eb8c08e94db0d4b86ce29b7 394 Pfam PF01546 Peptidase family M20/M25/M40 86 387 8.3E-34 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 YE0117 3cf0896a2eb8c08e94db0d4b86ce29b7 394 PANTHER PTHR11014 7 394 4.3E-232 T 22-04-2016 YE0117 3cf0896a2eb8c08e94db0d4b86ce29b7 394 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 85 94 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 YE0117 3cf0896a2eb8c08e94db0d4b86ce29b7 394 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 120 157 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 YE0117 3cf0896a2eb8c08e94db0d4b86ce29b7 394 SUPERFAMILY SSF53187 315 392 1.97E-56 T 22-04-2016 YE0117 3cf0896a2eb8c08e94db0d4b86ce29b7 394 SUPERFAMILY SSF53187 4 190 1.97E-56 T 22-04-2016 YE0117 3cf0896a2eb8c08e94db0d4b86ce29b7 394 Gene3D G3DSA:3.40.630.10 6 199 2.8E-61 T 22-04-2016 YE0117 3cf0896a2eb8c08e94db0d4b86ce29b7 394 Gene3D G3DSA:3.40.630.10 333 392 2.8E-61 T 22-04-2016 YE0117 3cf0896a2eb8c08e94db0d4b86ce29b7 394 Gene3D G3DSA:3.30.70.360 200 300 1.3E-26 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain YE3131 5e129d5d118afacc5682f63d456df80a 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 YE3131 5e129d5d118afacc5682f63d456df80a 90 SUPERFAMILY SSF47729 1 90 9.57E-32 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 YE3131 5e129d5d118afacc5682f63d456df80a 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 2.1E-32 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YE3131 5e129d5d118afacc5682f63d456df80a 90 PANTHER PTHR33175 1 90 2.5E-44 T 22-04-2016 YE3131 5e129d5d118afacc5682f63d456df80a 90 Gene3D G3DSA:4.10.520.10 1 90 2.4E-36 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 YE3131 5e129d5d118afacc5682f63d456df80a 90 SMART SM00411 1 90 4.1E-43 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YE3131 5e129d5d118afacc5682f63d456df80a 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.2E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YE3131 5e129d5d118afacc5682f63d456df80a 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.2E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YE3131 5e129d5d118afacc5682f63d456df80a 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.2E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YE0259 1c0f8facc56d91edca874311ff1a6a5e 88 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 47 5.8E-21 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 YE0259 1c0f8facc56d91edca874311ff1a6a5e 88 PANTHER PTHR33162 1 72 3.4E-22 T 22-04-2016 YE0259 1c0f8facc56d91edca874311ff1a6a5e 88 Pfam PF02416 mttA/Hcf106 family 4 49 8.8E-13 T 22-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 YE0259 1c0f8facc56d91edca874311ff1a6a5e 88 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 86 23.526 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 YE2945 d971557a29a23d2ab16d6a42e5781a9c 238 Gene3D G3DSA:3.10.20.30 1 106 3.5E-37 T 22-04-2016 IPR012675 Beta-grasp domain YE2945 d971557a29a23d2ab16d6a42e5781a9c 238 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 111 3.9E-32 T 22-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 YE2945 d971557a29a23d2ab16d6a42e5781a9c 238 PANTHER PTHR11921 4 236 1.0E-133 T 22-04-2016 YE2945 d971557a29a23d2ab16d6a42e5781a9c 238 PANTHER PTHR11921:SF29 4 236 1.0E-133 T 22-04-2016 YE2945 d971557a29a23d2ab16d6a42e5781a9c 238 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YE2945 d971557a29a23d2ab16d6a42e5781a9c 238 SUPERFAMILY SSF54292 1 106 3.68E-31 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YE2945 d971557a29a23d2ab16d6a42e5781a9c 238 Pfam PF13534 4Fe-4S dicluster domain 148 221 1.3E-9 T 22-04-2016 YE2945 d971557a29a23d2ab16d6a42e5781a9c 238 SUPERFAMILY SSF46548 107 236 8.02E-40 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 YE2945 d971557a29a23d2ab16d6a42e5781a9c 238 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 7 230 9.4E-91 T 22-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 YE2945 d971557a29a23d2ab16d6a42e5781a9c 238 Gene3D G3DSA:1.10.1060.10 108 236 3.8E-47 T 22-04-2016 YE1308 edd28f2640a7dd3b2b64799c8ddde6da 336 SMART SM00859 6 121 3.8E-34 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 YE1308 edd28f2640a7dd3b2b64799c8ddde6da 336 PANTHER PTHR10174 48 336 7.7E-54 T 22-04-2016 YE1308 edd28f2640a7dd3b2b64799c8ddde6da 336 Gene3D G3DSA:3.40.50.720 1 144 9.5E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain YE1308 edd28f2640a7dd3b2b64799c8ddde6da 336 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 316 2.8E-34 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YE1308 edd28f2640a7dd3b2b64799c8ddde6da 336 SUPERFAMILY SSF55347 132 318 1.28E-49 T 22-04-2016 YE1308 edd28f2640a7dd3b2b64799c8ddde6da 336 PANTHER PTHR10174:SF2 48 336 7.7E-54 T 22-04-2016 YE1308 edd28f2640a7dd3b2b64799c8ddde6da 336 PIRSF PIRSF000148 4 336 7.5E-96 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 YE1308 edd28f2640a7dd3b2b64799c8ddde6da 336 SUPERFAMILY SSF51735 5 156 2.45E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain YE1308 edd28f2640a7dd3b2b64799c8ddde6da 336 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 120 1.5E-26 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 YE1308 edd28f2640a7dd3b2b64799c8ddde6da 336 Gene3D G3DSA:3.30.360.10 145 313 1.8E-51 T 22-04-2016 YE2978 33f508dbb1f4841ba739c9a6edccd1a7 677 Pfam PF02378 Phosphotransferase system, EIIC 12 324 5.6E-78 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 YE2978 33f508dbb1f4841ba739c9a6edccd1a7 677 Gene3D G3DSA:2.70.70.10 521 671 1.6E-55 T 22-04-2016 YE2978 33f508dbb1f4841ba739c9a6edccd1a7 677 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 591 603 - T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YE2978 33f508dbb1f4841ba739c9a6edccd1a7 677 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 435 452 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 YE2978 33f508dbb1f4841ba739c9a6edccd1a7 677 Gene3D G3DSA:3.30.1360.60 420 496 2.3E-23 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YE2978 33f508dbb1f4841ba739c9a6edccd1a7 677 SUPERFAMILY SSF55604 422 495 7.59E-18 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YE2978 33f508dbb1f4841ba739c9a6edccd1a7 677 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 3 493 1.2E-203 T 22-04-2016 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 YE2978 33f508dbb1f4841ba739c9a6edccd1a7 677 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 529 652 2.1E-46 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YE2978 33f508dbb1f4841ba739c9a6edccd1a7 677 SUPERFAMILY SSF51261 521 672 1.38E-50 T 22-04-2016 IPR011055 Duplicated hybrid motif YE2978 33f508dbb1f4841ba739c9a6edccd1a7 677 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 383 482 9.0E-20 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YE2978 33f508dbb1f4841ba739c9a6edccd1a7 677 PANTHER PTHR30009:SF4 4 507 3.9E-267 T 22-04-2016 YE2978 33f508dbb1f4841ba739c9a6edccd1a7 677 PANTHER PTHR30009 4 507 3.9E-267 T 22-04-2016 YE2978 33f508dbb1f4841ba739c9a6edccd1a7 677 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 529 649 9.0E-47 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YE2978 33f508dbb1f4841ba739c9a6edccd1a7 677 Pfam PF00367 phosphotransferase system, EIIB 425 457 9.1E-12 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 YE3917 e4854c3184f2f6bef7a38facf4b9e29c 232 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 22-04-2016 IPR018280 Ribosomal protein S3, conserved site YE3917 e4854c3184f2f6bef7a38facf4b9e29c 232 SMART SM00322 60 125 1.6E-6 T 22-04-2016 IPR004087 K Homology domain GO:0003676 YE3917 e4854c3184f2f6bef7a38facf4b9e29c 232 PANTHER PTHR11760 2 232 4.8E-149 T 22-04-2016 YE3917 e4854c3184f2f6bef7a38facf4b9e29c 232 Gene3D G3DSA:3.30.1140.32 108 207 5.9E-48 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 YE3917 e4854c3184f2f6bef7a38facf4b9e29c 232 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 2.3E-100 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 YE3917 e4854c3184f2f6bef7a38facf4b9e29c 232 Gene3D G3DSA:3.30.300.20 18 107 1.1E-33 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta YE3917 e4854c3184f2f6bef7a38facf4b9e29c 232 PANTHER PTHR11760:SF19 2 232 4.8E-149 T 22-04-2016 YE3917 e4854c3184f2f6bef7a38facf4b9e29c 232 SUPERFAMILY SSF54821 108 206 6.93E-41 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 YE3917 e4854c3184f2f6bef7a38facf4b9e29c 232 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 1.8E-41 T 22-04-2016 YE3917 e4854c3184f2f6bef7a38facf4b9e29c 232 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.264 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 YE3917 e4854c3184f2f6bef7a38facf4b9e29c 232 SUPERFAMILY SSF54814 2 106 1.91E-37 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 YE3917 e4854c3184f2f6bef7a38facf4b9e29c 232 Pfam PF07650 KH domain 38 111 7.8E-19 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 YE3738 abc362102bab1e052dd26a4e25e3bdd6 171 SUPERFAMILY SSF101738 4 113 2.75E-48 T 22-04-2016 IPR007481 Stringent starvation protein B YE3738 abc362102bab1e052dd26a4e25e3bdd6 171 PANTHER PTHR37486 2 171 6.3E-86 T 22-04-2016 YE3738 abc362102bab1e052dd26a4e25e3bdd6 171 PANTHER PTHR37486:SF1 2 171 6.3E-86 T 22-04-2016 YE3738 abc362102bab1e052dd26a4e25e3bdd6 171 PIRSF PIRSF005276 3 171 4.7E-60 T 22-04-2016 IPR007481 Stringent starvation protein B YE3738 abc362102bab1e052dd26a4e25e3bdd6 171 Pfam PF04386 Stringent starvation protein B 9 171 3.4E-42 T 22-04-2016 IPR007481 Stringent starvation protein B YE3738 abc362102bab1e052dd26a4e25e3bdd6 171 Gene3D G3DSA:2.30.30.220 4 111 9.8E-52 T 22-04-2016 IPR007481 Stringent starvation protein B YE3364 634de95665413df42e4f072bc925ed65 141 PANTHER PTHR30041 1 136 2.4E-50 T 22-04-2016 YE3364 634de95665413df42e4f072bc925ed65 141 PANTHER PTHR30041:SF0 1 136 2.4E-50 T 22-04-2016 YE3364 634de95665413df42e4f072bc925ed65 141 Gene3D G3DSA:3.40.30.10 1 140 7.0E-57 T 22-04-2016 IPR012336 Thioredoxin-like fold YE3364 634de95665413df42e4f072bc925ed65 141 Pfam PF03960 ArsC family 7 115 1.0E-17 T 22-04-2016 IPR006660 Arsenate reductase-like YE3364 634de95665413df42e4f072bc925ed65 141 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 4 116 1.5E-36 T 22-04-2016 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 YE3364 634de95665413df42e4f072bc925ed65 141 SUPERFAMILY SSF52833 3 136 1.36E-36 T 22-04-2016 IPR012336 Thioredoxin-like fold YE1998 6e747f2ff8a7a0d0530353cb79300a02 708 Pfam PF00005 ABC transporter 480 629 2.2E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE1998 6e747f2ff8a7a0d0530353cb79300a02 708 PANTHER PTHR24221 131 708 2.0E-216 T 22-04-2016 YE1998 6e747f2ff8a7a0d0530353cb79300a02 708 Pfam PF00664 ABC transporter transmembrane region 150 418 2.3E-54 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YE1998 6e747f2ff8a7a0d0530353cb79300a02 708 Gene3D G3DSA:1.20.1560.10 135 445 5.3E-72 T 22-04-2016 YE1998 6e747f2ff8a7a0d0530353cb79300a02 708 SUPERFAMILY SSF52540 456 699 6.63E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1998 6e747f2ff8a7a0d0530353cb79300a02 708 Gene3D G3DSA:3.90.70.10 9 128 5.8E-8 T 22-04-2016 YE1998 6e747f2ff8a7a0d0530353cb79300a02 708 ProSitePatterns PS00211 ABC transporters family signature. 601 615 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE1998 6e747f2ff8a7a0d0530353cb79300a02 708 TIGRFAM TIGR01846 type_I_sec_HlyB: type I secretion system ATPase 54 701 5.4E-230 T 22-04-2016 IPR010132 ATPase, type I secretion system, HlyB GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 YE1998 6e747f2ff8a7a0d0530353cb79300a02 708 SMART SM00382 489 674 2.8E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain YE1998 6e747f2ff8a7a0d0530353cb79300a02 708 SUPERFAMILY SSF90123 135 447 3.53E-64 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YE1998 6e747f2ff8a7a0d0530353cb79300a02 708 PANTHER PTHR24221:SF246 131 708 2.0E-216 T 22-04-2016 YE1998 6e747f2ff8a7a0d0530353cb79300a02 708 Gene3D G3DSA:3.40.50.300 463 694 6.3E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE4120 3432a15093184a1a5e70c0288520b650 510 Gene3D G3DSA:3.40.50.300 252 502 1.7E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE4120 3432a15093184a1a5e70c0288520b650 510 SUPERFAMILY SSF52540 244 485 1.09E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE4120 3432a15093184a1a5e70c0288520b650 510 Gene3D G3DSA:3.40.50.300 3 235 2.7E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE4120 3432a15093184a1a5e70c0288520b650 510 ProSitePatterns PS00211 ABC transporters family signature. 406 420 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE4120 3432a15093184a1a5e70c0288520b650 510 SUPERFAMILY SSF52540 3 229 4.49E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE4120 3432a15093184a1a5e70c0288520b650 510 TIGRFAM TIGR02633 xylG: D-xylose ABC transporter, ATP-binding protein 4 502 1.0E-264 T 22-04-2016 IPR013455 ABC transporter, D-xylose, ATP-binding protein GO:0005524|GO:0015614|GO:0015753|GO:0016020 YE4120 3432a15093184a1a5e70c0288520b650 510 PANTHER PTHR24220 6 387 1.7E-222 T 22-04-2016 YE4120 3432a15093184a1a5e70c0288520b650 510 PANTHER PTHR24220:SF392 6 387 1.7E-222 T 22-04-2016 YE4120 3432a15093184a1a5e70c0288520b650 510 SMART SM00382 286 482 1.4E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain YE4120 3432a15093184a1a5e70c0288520b650 510 SMART SM00382 29 219 3.5E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain YE4120 3432a15093184a1a5e70c0288520b650 510 Pfam PF00005 ABC transporter 278 433 4.7E-19 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE4120 3432a15093184a1a5e70c0288520b650 510 Pfam PF00005 ABC transporter 20 171 5.0E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE1266 2c6c50e6b5173b06f830539835dcd394 81 PANTHER PTHR37531:SF1 2 74 2.0E-28 T 22-04-2016 YE1266 2c6c50e6b5173b06f830539835dcd394 81 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 12 58 3.1E-18 T 22-04-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 YE1266 2c6c50e6b5173b06f830539835dcd394 81 PANTHER PTHR37531 2 74 2.0E-28 T 22-04-2016 YE1266 2c6c50e6b5173b06f830539835dcd394 81 Pfam PF04995 Heme exporter protein D (CcmD) 15 58 2.0E-18 T 22-04-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 YE4183 70c77755ee2de4890163a7501f69c84c 652 SMART SM00283 404 651 2.7E-78 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 YE4183 70c77755ee2de4890163a7501f69c84c 652 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 425 454 2.6E-53 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE4183 70c77755ee2de4890163a7501f69c84c 652 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 502 529 2.6E-53 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE4183 70c77755ee2de4890163a7501f69c84c 652 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 579 608 2.6E-53 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE4183 70c77755ee2de4890163a7501f69c84c 652 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 531 560 2.6E-53 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE4183 70c77755ee2de4890163a7501f69c84c 652 Pfam PF00672 HAMP domain 334 400 9.6E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YE4183 70c77755ee2de4890163a7501f69c84c 652 SUPERFAMILY SSF58104 371 652 1.83E-71 T 22-04-2016 YE4183 70c77755ee2de4890163a7501f69c84c 652 Gene3D G3DSA:3.30.450.20 179 325 9.3E-13 T 22-04-2016 YE4183 70c77755ee2de4890163a7501f69c84c 652 PANTHER PTHR32089 324 652 6.4E-135 T 22-04-2016 YE4183 70c77755ee2de4890163a7501f69c84c 652 PANTHER PTHR32089:SF63 324 652 6.4E-135 T 22-04-2016 YE4183 70c77755ee2de4890163a7501f69c84c 652 Gene3D G3DSA:1.10.287.950 419 623 5.9E-58 T 22-04-2016 YE4183 70c77755ee2de4890163a7501f69c84c 652 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 459 650 5.8E-57 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 YE4183 70c77755ee2de4890163a7501f69c84c 652 SMART SM00304 349 403 8.7E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YE4183 70c77755ee2de4890163a7501f69c84c 652 Pfam PF02743 Cache domain 60 311 3.2E-25 T 22-04-2016 IPR033479 Double Cache domain 1 YE3477 18d555c4f1d6ac1ce98cc03474ca4cfb 236 TIGRFAM TIGR02690 resist_ArsH: arsenical resistance protein ArsH 22 222 9.9E-122 T 22-04-2016 IPR014063 Arsenate resistance ArsH YE3477 18d555c4f1d6ac1ce98cc03474ca4cfb 236 PANTHER PTHR30041 11 232 1.4E-128 T 22-04-2016 YE3477 18d555c4f1d6ac1ce98cc03474ca4cfb 236 Pfam PF03358 NADPH-dependent FMN reductase 30 175 2.1E-26 T 22-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 YE3477 18d555c4f1d6ac1ce98cc03474ca4cfb 236 Gene3D G3DSA:3.40.50.360 3 225 2.7E-103 T 22-04-2016 IPR029039 Flavoprotein-like domain YE3477 18d555c4f1d6ac1ce98cc03474ca4cfb 236 SUPERFAMILY SSF52218 21 223 1.53E-63 T 22-04-2016 IPR029039 Flavoprotein-like domain YE3477 18d555c4f1d6ac1ce98cc03474ca4cfb 236 PANTHER PTHR30041:SF1 11 232 1.4E-128 T 22-04-2016 YE0341 f38fe931847e711ad8474c275b9e6b09 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 9.0E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE0341 f38fe931847e711ad8474c275b9e6b09 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 9.0E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE0341 f38fe931847e711ad8474c275b9e6b09 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 9.0E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE0341 f38fe931847e711ad8474c275b9e6b09 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 9.0E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE0341 f38fe931847e711ad8474c275b9e6b09 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 9.0E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE0341 f38fe931847e711ad8474c275b9e6b09 257 PANTHER PTHR24322:SF366 152 184 1.7E-48 T 22-04-2016 YE0341 f38fe931847e711ad8474c275b9e6b09 257 PANTHER PTHR24322:SF366 13 136 1.7E-48 T 22-04-2016 YE0341 f38fe931847e711ad8474c275b9e6b09 257 PANTHER PTHR24322 152 184 1.7E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE0341 f38fe931847e711ad8474c275b9e6b09 257 PANTHER PTHR24322 13 136 1.7E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE0341 f38fe931847e711ad8474c275b9e6b09 257 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 183 0.0038 T 22-04-2016 YE0341 f38fe931847e711ad8474c275b9e6b09 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 250 5.8E-54 T 22-04-2016 YE0341 f38fe931847e711ad8474c275b9e6b09 257 Gene3D G3DSA:3.40.50.720 3 251 2.0E-74 T 22-04-2016 IPR016040 NAD(P)-binding domain YE0341 f38fe931847e711ad8474c275b9e6b09 257 SUPERFAMILY SSF51735 7 251 2.72E-70 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2048 5372236fc9dc5c0015332b0dea239cb4 288 Pfam PF03466 LysR substrate binding domain 88 266 9.9E-25 T 22-04-2016 IPR005119 LysR, substrate-binding YE2048 5372236fc9dc5c0015332b0dea239cb4 288 Gene3D G3DSA:3.40.190.10 217 257 8.3E-11 T 22-04-2016 YE2048 5372236fc9dc5c0015332b0dea239cb4 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.5E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE2048 5372236fc9dc5c0015332b0dea239cb4 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.5E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE2048 5372236fc9dc5c0015332b0dea239cb4 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.5E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE2048 5372236fc9dc5c0015332b0dea239cb4 288 Gene3D G3DSA:1.10.10.10 2 76 1.9E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2048 5372236fc9dc5c0015332b0dea239cb4 288 Gene3D G3DSA:3.40.190.10 88 216 3.7E-18 T 22-04-2016 YE2048 5372236fc9dc5c0015332b0dea239cb4 288 SUPERFAMILY SSF46785 2 84 1.23E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2048 5372236fc9dc5c0015332b0dea239cb4 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.3E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE2048 5372236fc9dc5c0015332b0dea239cb4 288 SUPERFAMILY SSF53850 88 282 3.86E-25 T 22-04-2016 YE2048 5372236fc9dc5c0015332b0dea239cb4 288 PANTHER PTHR30126 1 282 2.0E-47 T 22-04-2016 YE3356 b2567677e62effc65984ecfb6634674c 317 PANTHER PTHR24078 4 77 3.1E-78 T 22-04-2016 YE3356 b2567677e62effc65984ecfb6634674c 317 PANTHER PTHR24078 96 307 3.1E-78 T 22-04-2016 YE3356 b2567677e62effc65984ecfb6634674c 317 SUPERFAMILY SSF49493 129 225 6.67E-17 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 YE3356 b2567677e62effc65984ecfb6634674c 317 SMART SM00271 4 61 5.5E-27 T 22-04-2016 IPR001623 DnaJ domain YE3356 b2567677e62effc65984ecfb6634674c 317 SUPERFAMILY SSF49493 218 301 6.41E-18 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 YE3356 b2567677e62effc65984ecfb6634674c 317 Gene3D G3DSA:2.60.260.20 130 213 5.4E-17 T 22-04-2016 YE3356 b2567677e62effc65984ecfb6634674c 317 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 22-04-2016 IPR018253 DnaJ domain, conserved site YE3356 b2567677e62effc65984ecfb6634674c 317 PANTHER PTHR24078:SF190 4 77 3.1E-78 T 22-04-2016 YE3356 b2567677e62effc65984ecfb6634674c 317 PANTHER PTHR24078:SF190 96 307 3.1E-78 T 22-04-2016 YE3356 b2567677e62effc65984ecfb6634674c 317 PRINTS PR00625 DnaJ domain signature 41 61 1.3E-20 T 22-04-2016 IPR001623 DnaJ domain YE3356 b2567677e62effc65984ecfb6634674c 317 PRINTS PR00625 DnaJ domain signature 25 40 1.3E-20 T 22-04-2016 IPR001623 DnaJ domain YE3356 b2567677e62effc65984ecfb6634674c 317 PRINTS PR00625 DnaJ domain signature 7 25 1.3E-20 T 22-04-2016 IPR001623 DnaJ domain YE3356 b2567677e62effc65984ecfb6634674c 317 PRINTS PR00625 DnaJ domain signature 61 80 1.3E-20 T 22-04-2016 IPR001623 DnaJ domain YE3356 b2567677e62effc65984ecfb6634674c 317 Pfam PF00226 DnaJ domain 5 66 4.0E-24 T 22-04-2016 IPR001623 DnaJ domain YE3356 b2567677e62effc65984ecfb6634674c 317 Pfam PF01556 DnaJ C terminal domain 134 290 3.7E-34 T 22-04-2016 IPR002939 Chaperone DnaJ, C-terminal YE3356 b2567677e62effc65984ecfb6634674c 317 Gene3D G3DSA:1.10.287.110 1 113 9.5E-29 T 22-04-2016 IPR001623 DnaJ domain YE3356 b2567677e62effc65984ecfb6634674c 317 Gene3D G3DSA:2.60.260.20 215 290 7.9E-18 T 22-04-2016 YE3356 b2567677e62effc65984ecfb6634674c 317 SUPERFAMILY SSF46565 1 97 1.44E-28 T 22-04-2016 IPR001623 DnaJ domain YE3926 360a6bde643ab1e048413810eb5068e8 64 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 52 4.0E-15 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain YE3926 360a6bde643ab1e048413810eb5068e8 64 PANTHER PTHR37424 2 64 1.8E-21 T 22-04-2016 YE3926 360a6bde643ab1e048413810eb5068e8 64 PANTHER PTHR37424:SF1 2 64 1.8E-21 T 22-04-2016 YE1531 1282e6279c2c1a86a2799106122803c6 215 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 1 208 1.5E-88 T 22-04-2016 IPR012838 Pyruvate formate-lyase activating enzyme GO:0043365|GO:0055114 YE1531 1282e6279c2c1a86a2799106122803c6 215 PANTHER PTHR30352 1 215 4.5E-129 T 22-04-2016 YE1531 1282e6279c2c1a86a2799106122803c6 215 Gene3D G3DSA:3.80.30.10 38 215 6.3E-68 T 22-04-2016 YE1531 1282e6279c2c1a86a2799106122803c6 215 PANTHER PTHR30352:SF9 1 215 4.5E-129 T 22-04-2016 YE1531 1282e6279c2c1a86a2799106122803c6 215 Pfam PF13353 4Fe-4S single cluster domain 1 99 1.8E-9 T 22-04-2016 YE1531 1282e6279c2c1a86a2799106122803c6 215 Pfam PF04055 Radical SAM superfamily 1 147 7.4E-28 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 YE1531 1282e6279c2c1a86a2799106122803c6 215 SUPERFAMILY SSF102114 1 182 1.39E-20 T 22-04-2016 YE1987 23c5e8919b5f8c7d4264217ae7eaf628 213 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 22-04-2016 IPR004035 Endonuclease III, iron-sulphur binding site YE1987 23c5e8919b5f8c7d4264217ae7eaf628 213 PANTHER PTHR10359:SF18 1 212 8.7E-90 T 22-04-2016 YE1987 23c5e8919b5f8c7d4264217ae7eaf628 213 Pfam PF00633 Helix-hairpin-helix motif 100 127 3.9E-7 T 22-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 YE1987 23c5e8919b5f8c7d4264217ae7eaf628 213 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 1.1E-4 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 YE1987 23c5e8919b5f8c7d4264217ae7eaf628 213 PIRSF PIRSF001435 1 211 2.5E-50 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 YE1987 23c5e8919b5f8c7d4264217ae7eaf628 213 SMART SM00478 38 185 2.1E-53 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 YE1987 23c5e8919b5f8c7d4264217ae7eaf628 213 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 1.1E-19 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 YE1987 23c5e8919b5f8c7d4264217ae7eaf628 213 Gene3D G3DSA:1.10.340.30 23 122 2.8E-32 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 YE1987 23c5e8919b5f8c7d4264217ae7eaf628 213 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 22-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 YE1987 23c5e8919b5f8c7d4264217ae7eaf628 213 Gene3D G3DSA:1.10.1670.10 123 208 1.0E-35 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal YE1987 23c5e8919b5f8c7d4264217ae7eaf628 213 PANTHER PTHR10359 1 212 8.7E-90 T 22-04-2016 YE1987 23c5e8919b5f8c7d4264217ae7eaf628 213 TIGRFAM TIGR01083 nth: endonuclease III 4 194 5.2E-87 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 YE1987 23c5e8919b5f8c7d4264217ae7eaf628 213 Hamap MF_00942 Endonuclease III [nth]. 1 209 36.796 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 YE1987 23c5e8919b5f8c7d4264217ae7eaf628 213 SUPERFAMILY SSF48150 2 207 5.02E-72 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 YE1987 23c5e8919b5f8c7d4264217ae7eaf628 213 SMART SM00525 186 206 4.4E-5 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 YE0942 407341b7e26669307550d2d6d045b7da 145 Pfam PF00581 Rhodanese-like domain 36 122 1.2E-8 T 22-04-2016 IPR001763 Rhodanese-like domain YE0942 407341b7e26669307550d2d6d045b7da 145 SUPERFAMILY SSF52821 24 131 1.19E-22 T 22-04-2016 IPR001763 Rhodanese-like domain YE0942 407341b7e26669307550d2d6d045b7da 145 SMART SM00450 30 127 7.3E-8 T 22-04-2016 IPR001763 Rhodanese-like domain YE0942 407341b7e26669307550d2d6d045b7da 145 Gene3D G3DSA:3.40.250.10 31 129 2.4E-17 T 22-04-2016 IPR001763 Rhodanese-like domain YE0263 873fa7af5d4c41ccb7ebe324d20aa4e3 340 SUPERFAMILY SSF51569 7 335 2.34E-143 T 22-04-2016 YE0263 873fa7af5d4c41ccb7ebe324d20aa4e3 340 PANTHER PTHR11458 1 340 1.8E-190 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YE0263 873fa7af5d4c41ccb7ebe324d20aa4e3 340 SMART SM01004 9 333 3.8E-238 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YE0263 873fa7af5d4c41ccb7ebe324d20aa4e3 340 Gene3D G3DSA:3.20.20.70 9 336 6.5E-152 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YE0263 873fa7af5d4c41ccb7ebe324d20aa4e3 340 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 252 264 - T 22-04-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YE0263 873fa7af5d4c41ccb7ebe324d20aa4e3 340 Pfam PF00490 Delta-aminolevulinic acid dehydratase 12 332 1.0E-139 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YE0263 873fa7af5d4c41ccb7ebe324d20aa4e3 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 198 217 2.9E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YE0263 873fa7af5d4c41ccb7ebe324d20aa4e3 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 277 292 2.9E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YE0263 873fa7af5d4c41ccb7ebe324d20aa4e3 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 252 268 2.9E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YE0263 873fa7af5d4c41ccb7ebe324d20aa4e3 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 160 179 2.9E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YE0263 873fa7af5d4c41ccb7ebe324d20aa4e3 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 2.9E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YE0263 873fa7af5d4c41ccb7ebe324d20aa4e3 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 129 143 2.9E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YE0263 873fa7af5d4c41ccb7ebe324d20aa4e3 340 PIRSF PIRSF001415 2 336 9.5E-153 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YE3706 0243b0e48c3c35e7f9ef535447c7ad40 496 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 108 495 9.1E-154 T 22-04-2016 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 YE3706 0243b0e48c3c35e7f9ef535447c7ad40 496 SMART SM00858 11 82 4.0E-12 T 22-04-2016 IPR013974 SAF domain YE3706 0243b0e48c3c35e7f9ef535447c7ad40 496 PANTHER PTHR30536:SF5 1 496 8.3E-285 T 22-04-2016 YE3706 0243b0e48c3c35e7f9ef535447c7ad40 496 PANTHER PTHR30536 1 496 8.3E-285 T 22-04-2016 YE3706 0243b0e48c3c35e7f9ef535447c7ad40 496 Pfam PF08666 SAF domain 11 80 9.6E-12 T 22-04-2016 IPR013974 SAF domain YE2390 0b617e2a3ea3c82b5f6f991a9fbedaf5 261 PANTHER PTHR30477 9 260 1.7E-89 T 22-04-2016 YE2390 0b617e2a3ea3c82b5f6f991a9fbedaf5 261 Gene3D G3DSA:1.10.3470.10 44 259 6.9E-12 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YE2390 0b617e2a3ea3c82b5f6f991a9fbedaf5 261 Pfam PF00950 ABC 3 transport family 2 255 2.0E-84 T 22-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 YE2390 0b617e2a3ea3c82b5f6f991a9fbedaf5 261 SUPERFAMILY SSF81345 3 255 4.97E-42 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YE2390 0b617e2a3ea3c82b5f6f991a9fbedaf5 261 PANTHER PTHR30477:SF0 9 260 1.7E-89 T 22-04-2016 YE3365 62a8e8dfd5ca174beadc79dff3229614 429 PANTHER PTHR10283 1 427 9.4E-162 T 22-04-2016 YE3365 62a8e8dfd5ca174beadc79dff3229614 429 PRINTS PR00758 Arsenical pump membrane protein signature 144 168 4.2E-123 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YE3365 62a8e8dfd5ca174beadc79dff3229614 429 PRINTS PR00758 Arsenical pump membrane protein signature 323 345 4.2E-123 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YE3365 62a8e8dfd5ca174beadc79dff3229614 429 PRINTS PR00758 Arsenical pump membrane protein signature 217 242 4.2E-123 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YE3365 62a8e8dfd5ca174beadc79dff3229614 429 PRINTS PR00758 Arsenical pump membrane protein signature 397 421 4.2E-123 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YE3365 62a8e8dfd5ca174beadc79dff3229614 429 PRINTS PR00758 Arsenical pump membrane protein signature 278 302 4.2E-123 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YE3365 62a8e8dfd5ca174beadc79dff3229614 429 PRINTS PR00758 Arsenical pump membrane protein signature 364 389 4.2E-123 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YE3365 62a8e8dfd5ca174beadc79dff3229614 429 PRINTS PR00758 Arsenical pump membrane protein signature 101 125 4.2E-123 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YE3365 62a8e8dfd5ca174beadc79dff3229614 429 PRINTS PR00758 Arsenical pump membrane protein signature 177 200 4.2E-123 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YE3365 62a8e8dfd5ca174beadc79dff3229614 429 PANTHER PTHR10283:SF21 1 427 9.4E-162 T 22-04-2016 YE3365 62a8e8dfd5ca174beadc79dff3229614 429 Pfam PF02040 Arsenical pump membrane protein 4 423 1.7E-163 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YE3365 62a8e8dfd5ca174beadc79dff3229614 429 TIGRFAM TIGR00935 2a45: arsenite/antimonite efflux pump membrane protein 3 427 1.6E-219 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YE1001 02c1826e717b532ef29b7d23acaee2e1 152 SUPERFAMILY SSF143422 1 129 9.29E-48 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YE1001 02c1826e717b532ef29b7d23acaee2e1 152 SMART SM01321 11 129 1.8E-41 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YE1001 02c1826e717b532ef29b7d23acaee2e1 152 Gene3D G3DSA:3.30.70.1290 3 132 3.4E-56 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YE1001 02c1826e717b532ef29b7d23acaee2e1 152 PANTHER PTHR33360:SF2 2 145 1.4E-93 T 22-04-2016 YE1001 02c1826e717b532ef29b7d23acaee2e1 152 Pfam PF01797 Transposase IS200 like 12 129 2.5E-37 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YE1001 02c1826e717b532ef29b7d23acaee2e1 152 PANTHER PTHR33360 2 145 1.4E-93 T 22-04-2016 YE1694 02c1826e717b532ef29b7d23acaee2e1 152 SUPERFAMILY SSF143422 1 129 9.29E-48 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YE1694 02c1826e717b532ef29b7d23acaee2e1 152 SMART SM01321 11 129 1.8E-41 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YE1694 02c1826e717b532ef29b7d23acaee2e1 152 Gene3D G3DSA:3.30.70.1290 3 132 3.4E-56 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YE1694 02c1826e717b532ef29b7d23acaee2e1 152 PANTHER PTHR33360:SF2 2 145 1.4E-93 T 22-04-2016 YE1694 02c1826e717b532ef29b7d23acaee2e1 152 Pfam PF01797 Transposase IS200 like 12 129 2.5E-37 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 YE1694 02c1826e717b532ef29b7d23acaee2e1 152 PANTHER PTHR33360 2 145 1.4E-93 T 22-04-2016 YE3846 9eb965e70f349f50a13563d7b10397fa 117 SUPERFAMILY SSF142906 1 116 1.57E-37 T 22-04-2016 YE3846 9eb965e70f349f50a13563d7b10397fa 117 Pfam PF04237 YjbR 12 102 3.3E-21 T 22-04-2016 IPR007351 Uncharacterised protein YjbR YE3846 9eb965e70f349f50a13563d7b10397fa 117 PANTHER PTHR35145 1 117 2.3E-41 T 22-04-2016 YE0764 b9cc4a828400fc028dcea5a06500cdfa 188 Pfam PF01583 Adenylylsulphate kinase 14 166 6.0E-73 T 22-04-2016 YE0764 b9cc4a828400fc028dcea5a06500cdfa 188 SUPERFAMILY SSF52540 12 178 2.26E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0764 b9cc4a828400fc028dcea5a06500cdfa 188 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 13 184 38.328 T 22-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 YE0764 b9cc4a828400fc028dcea5a06500cdfa 188 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 2 180 1.5E-83 T 22-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 YE0764 b9cc4a828400fc028dcea5a06500cdfa 188 Gene3D G3DSA:3.40.50.300 2 187 8.6E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0764 b9cc4a828400fc028dcea5a06500cdfa 188 PANTHER PTHR11055 2 187 4.4E-129 T 22-04-2016 YE0670 bfcf7b717f256285b1380384aa721b3a 444 Gene3D G3DSA:3.40.1190.10 94 305 7.4E-67 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YE0670 bfcf7b717f256285b1380384aa721b3a 444 SUPERFAMILY SSF53623 95 303 4.84E-55 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YE0670 bfcf7b717f256285b1380384aa721b3a 444 SUPERFAMILY SSF51984 3 94 6.93E-25 T 22-04-2016 YE0670 bfcf7b717f256285b1380384aa721b3a 444 PANTHER PTHR23135:SF2 1 443 1.7E-173 T 22-04-2016 YE0670 bfcf7b717f256285b1380384aa721b3a 444 Gene3D G3DSA:3.40.50.720 3 92 2.2E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain YE0670 bfcf7b717f256285b1380384aa721b3a 444 Pfam PF02875 Mur ligase family, glutamate ligase domain 307 363 4.0E-8 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YE0670 bfcf7b717f256285b1380384aa721b3a 444 Gene3D G3DSA:3.90.190.20 306 439 5.6E-43 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YE0670 bfcf7b717f256285b1380384aa721b3a 444 SUPERFAMILY SSF53244 305 443 1.88E-50 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 YE0670 bfcf7b717f256285b1380384aa721b3a 444 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 8 441 1.8E-125 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YE0670 bfcf7b717f256285b1380384aa721b3a 444 PANTHER PTHR23135 1 443 1.7E-173 T 22-04-2016 YE0670 bfcf7b717f256285b1380384aa721b3a 444 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 7 443 34.754 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YE0670 bfcf7b717f256285b1380384aa721b3a 444 Pfam PF08245 Mur ligase middle domain 110 286 9.9E-27 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 YE3919 b809f598f80073bab3bc75627b009ce4 92 PIRSF PIRSF002144 1 92 1.9E-31 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 YE3919 b809f598f80073bab3bc75627b009ce4 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 1.5E-24 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 YE3919 b809f598f80073bab3bc75627b009ce4 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 1.5E-24 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 YE3919 b809f598f80073bab3bc75627b009ce4 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 1.5E-24 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 YE3919 b809f598f80073bab3bc75627b009ce4 92 Pfam PF00203 Ribosomal protein S19 3 83 2.7E-36 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 YE3919 b809f598f80073bab3bc75627b009ce4 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.571 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 YE3919 b809f598f80073bab3bc75627b009ce4 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 1.1E-45 T 22-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 YE3919 b809f598f80073bab3bc75627b009ce4 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 22-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 YE3919 b809f598f80073bab3bc75627b009ce4 92 Gene3D G3DSA:3.30.860.10 1 91 2.9E-40 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 YE3919 b809f598f80073bab3bc75627b009ce4 92 PANTHER PTHR11880 1 91 5.6E-57 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 YE3919 b809f598f80073bab3bc75627b009ce4 92 SUPERFAMILY SSF54570 3 84 5.75E-35 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 YE0382 e166617562b46396775cede742114d62 432 Gene3D G3DSA:3.40.440.10 3 94 2.6E-70 T 22-04-2016 YE0382 e166617562b46396775cede742114d62 432 Gene3D G3DSA:3.40.440.10 196 266 2.6E-70 T 22-04-2016 YE0382 e166617562b46396775cede742114d62 432 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 432 217.621 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 YE0382 e166617562b46396775cede742114d62 432 Pfam PF00709 Adenylosuccinate synthetase 5 423 4.8E-176 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 YE0382 e166617562b46396775cede742114d62 432 Gene3D G3DSA:1.10.300.10 103 195 7.0E-38 T 22-04-2016 YE0382 e166617562b46396775cede742114d62 432 PANTHER PTHR11846 1 429 1.1E-260 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 YE0382 e166617562b46396775cede742114d62 432 Gene3D G3DSA:3.90.170.10 267 426 1.6E-66 T 22-04-2016 YE0382 e166617562b46396775cede742114d62 432 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 22-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 YE0382 e166617562b46396775cede742114d62 432 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 22-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 YE0382 e166617562b46396775cede742114d62 432 SMART SM00788 4 425 6.4E-296 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 YE0382 e166617562b46396775cede742114d62 432 SUPERFAMILY SSF52540 3 431 1.49E-177 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0382 e166617562b46396775cede742114d62 432 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 430 1.2E-202 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 YE1803A f4391e56fa2f15ab3bbc0ee317cb528a 46 SUPERFAMILY SSF46689 4 37 8.06E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE1803A f4391e56fa2f15ab3bbc0ee317cb528a 46 Gene3D G3DSA:1.10.10.60 2 34 4.7E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE0247 fd1430aeadeb64f2937371de3dfc8c0d 299 SUPERFAMILY SSF103481 36 131 2.48E-7 T 22-04-2016 YE0247 fd1430aeadeb64f2937371de3dfc8c0d 299 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 11 273 1.1E-84 T 22-04-2016 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 YE0247 fd1430aeadeb64f2937371de3dfc8c0d 299 Pfam PF00892 EamA-like transporter family 1 129 3.7E-8 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YE0247 fd1430aeadeb64f2937371de3dfc8c0d 299 Pfam PF00892 EamA-like transporter family 138 274 6.4E-12 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YE0247 fd1430aeadeb64f2937371de3dfc8c0d 299 SUPERFAMILY SSF103481 198 278 4.45E-9 T 22-04-2016 YE0247 fd1430aeadeb64f2937371de3dfc8c0d 299 PANTHER PTHR22911:SF27 1 293 4.3E-90 T 22-04-2016 YE0247 fd1430aeadeb64f2937371de3dfc8c0d 299 PANTHER PTHR22911 1 293 4.3E-90 T 22-04-2016 YE3965 90d98d2c18405c77c6d92fc3d4366078 848 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 678 694 - T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YE3965 90d98d2c18405c77c6d92fc3d4366078 848 SUPERFAMILY SSF55124 501 626 2.33E-32 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YE3965 90d98d2c18405c77c6d92fc3d4366078 848 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 632 756 1.0E-14 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YE3965 90d98d2c18405c77c6d92fc3d4366078 848 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 285 3.6E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE3965 90d98d2c18405c77c6d92fc3d4366078 848 SUPERFAMILY SSF56014 632 808 1.7E-45 T 22-04-2016 YE3965 90d98d2c18405c77c6d92fc3d4366078 848 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 5.9E-14 T 22-04-2016 YE3965 90d98d2c18405c77c6d92fc3d4366078 848 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 5.9E-14 T 22-04-2016 YE3965 90d98d2c18405c77c6d92fc3d4366078 848 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 5.9E-14 T 22-04-2016 YE3965 90d98d2c18405c77c6d92fc3d4366078 848 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 5.9E-14 T 22-04-2016 YE3965 90d98d2c18405c77c6d92fc3d4366078 848 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 800 0.0 T 22-04-2016 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 UniPathway: UPA00653 YE3965 90d98d2c18405c77c6d92fc3d4366078 848 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 559 621 8.0E-12 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YE3965 90d98d2c18405c77c6d92fc3d4366078 848 Pfam PF04324 BFD-like [2Fe-2S] binding domain 423 470 5.6E-15 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain YE3965 90d98d2c18405c77c6d92fc3d4366078 848 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 4.2E-11 T 22-04-2016 YE3965 90d98d2c18405c77c6d92fc3d4366078 848 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 4.2E-11 T 22-04-2016 YE3965 90d98d2c18405c77c6d92fc3d4366078 848 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 4.2E-11 T 22-04-2016 YE3965 90d98d2c18405c77c6d92fc3d4366078 848 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 105 114 4.2E-11 T 22-04-2016 YE3965 90d98d2c18405c77c6d92fc3d4366078 848 PANTHER PTHR11493:SF52 2 256 0.0 T 22-04-2016 YE3965 90d98d2c18405c77c6d92fc3d4366078 848 PANTHER PTHR11493:SF52 418 833 0.0 T 22-04-2016 YE3965 90d98d2c18405c77c6d92fc3d4366078 848 Gene3D G3DSA:3.50.50.60 105 309 2.1E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE3965 90d98d2c18405c77c6d92fc3d4366078 848 PRINTS PR00397 Sirohaem Fe-binding site signature 635 653 1.0E-5 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YE3965 90d98d2c18405c77c6d92fc3d4366078 848 PRINTS PR00397 Sirohaem Fe-binding site signature 678 696 1.0E-5 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 YE3965 90d98d2c18405c77c6d92fc3d4366078 848 PIRSF PIRSF037149 1 834 0.0 T 22-04-2016 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 YE3965 90d98d2c18405c77c6d92fc3d4366078 848 SUPERFAMILY SSF51905 2 189 8.55E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE3965 90d98d2c18405c77c6d92fc3d4366078 848 Gene3D G3DSA:3.50.50.60 2 104 4.4E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE3965 90d98d2c18405c77c6d92fc3d4366078 848 PANTHER PTHR11493 2 256 0.0 T 22-04-2016 YE3965 90d98d2c18405c77c6d92fc3d4366078 848 PANTHER PTHR11493 418 833 0.0 T 22-04-2016 YE3965 90d98d2c18405c77c6d92fc3d4366078 848 SUPERFAMILY SSF51905 144 310 5.74E-29 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE3965 90d98d2c18405c77c6d92fc3d4366078 848 Gene3D G3DSA:3.30.413.10 633 768 5.1E-30 T 22-04-2016 YE2254 5ac17a8dae85f445bebe3940ce7af59c 268 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 266 1.2E-88 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 YE2254 5ac17a8dae85f445bebe3940ce7af59c 268 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 266 4.0E-105 T 22-04-2016 YE2254 5ac17a8dae85f445bebe3940ce7af59c 268 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 22-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 YE2254 5ac17a8dae85f445bebe3940ce7af59c 268 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 223 234 - T 22-04-2016 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 YE2254 5ac17a8dae85f445bebe3940ce7af59c 268 Gene3D G3DSA:3.60.10.10 1 266 4.2E-86 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase YE2254 5ac17a8dae85f445bebe3940ce7af59c 268 SUPERFAMILY SSF56219 1 267 1.31E-87 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase YE2254 5ac17a8dae85f445bebe3940ce7af59c 268 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 259 8.6E-29 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase YE2254 5ac17a8dae85f445bebe3940ce7af59c 268 PANTHER PTHR22748:SF7 1 268 9.0E-140 T 22-04-2016 YE2254 5ac17a8dae85f445bebe3940ce7af59c 268 PANTHER PTHR22748 1 268 9.0E-140 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 YE1012 283d964debad8f0028e2ddb189e65613 318 Gene3D G3DSA:2.50.20.10 122 185 1.3E-8 T 22-04-2016 YE1012 283d964debad8f0028e2ddb189e65613 318 Pfam PF03888 MucB/RseB N-terminal domain 28 196 1.5E-61 T 22-04-2016 IPR033434 MucB/RseB, N-terminal YE1012 283d964debad8f0028e2ddb189e65613 318 Pfam PF17188 MucB/RseB C-terminal domain 218 312 5.6E-29 T 22-04-2016 IPR033436 MucB/RseB, C-terminal YE1012 283d964debad8f0028e2ddb189e65613 318 PIRSF PIRSF005427 1 318 7.3E-88 T 22-04-2016 IPR005588 MucB/RseB YE1012 283d964debad8f0028e2ddb189e65613 318 PANTHER PTHR38782 2 318 3.7E-138 T 22-04-2016 YE1012 283d964debad8f0028e2ddb189e65613 318 PANTHER PTHR38782:SF1 2 318 3.7E-138 T 22-04-2016 YE2813 844c77f646b88ad2c5fcaaf7786a5b73 336 PANTHER PTHR32196 1 336 2.4E-231 T 22-04-2016 YE2813 844c77f646b88ad2c5fcaaf7786a5b73 336 PANTHER PTHR32196:SF18 1 336 2.4E-231 T 22-04-2016 IPR030158 Galactoside transport system permease protein MglC GO:0008643|GO:0016021 YE2813 844c77f646b88ad2c5fcaaf7786a5b73 336 Pfam PF02653 Branched-chain amino acid transport system / permease component 42 325 2.1E-48 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YE1383 ce50b0db90aed9f9e9b2014394a3b42e 397 Pfam PF00994 Probable molybdopterin binding domain 6 170 1.7E-32 T 22-04-2016 IPR001453 MoaB/Mog domain YE1383 ce50b0db90aed9f9e9b2014394a3b42e 397 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 1 397 1.7E-124 T 22-04-2016 IPR008135 Competence-induced protein CinA YE1383 ce50b0db90aed9f9e9b2014394a3b42e 397 SUPERFAMILY SSF142433 250 380 2.09E-5 T 22-04-2016 IPR008136 CinA, C-terminal YE1383 ce50b0db90aed9f9e9b2014394a3b42e 397 PANTHER PTHR13939 2 387 1.7E-214 T 22-04-2016 YE1383 ce50b0db90aed9f9e9b2014394a3b42e 397 Gene3D G3DSA:3.40.980.10 2 200 1.6E-29 T 22-04-2016 IPR001453 MoaB/Mog domain YE1383 ce50b0db90aed9f9e9b2014394a3b42e 397 SMART SM00852 5 172 4.9E-34 T 22-04-2016 IPR001453 MoaB/Mog domain YE1383 ce50b0db90aed9f9e9b2014394a3b42e 397 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 397 118.275 T 22-04-2016 IPR008135 Competence-induced protein CinA YE1383 ce50b0db90aed9f9e9b2014394a3b42e 397 PIRSF PIRSF006728 1 385 6.5E-114 T 22-04-2016 IPR008135 Competence-induced protein CinA YE1383 ce50b0db90aed9f9e9b2014394a3b42e 397 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 2 165 7.5E-32 T 22-04-2016 IPR001453 MoaB/Mog domain YE1383 ce50b0db90aed9f9e9b2014394a3b42e 397 SUPERFAMILY SSF53218 1 203 7.2E-37 T 22-04-2016 IPR001453 MoaB/Mog domain YE1383 ce50b0db90aed9f9e9b2014394a3b42e 397 PANTHER PTHR13939:SF3 2 387 1.7E-214 T 22-04-2016 YE0540 ed422a28eef6cd40fb01a8de5f9190f1 374 SUPERFAMILY SSF82549 30 371 7.59E-124 T 22-04-2016 YE0540 ed422a28eef6cd40fb01a8de5f9190f1 374 Gene3D G3DSA:3.30.1180.20 204 371 4.1E-66 T 22-04-2016 YE0540 ed422a28eef6cd40fb01a8de5f9190f1 374 PANTHER PTHR28629 280 371 2.5E-162 T 22-04-2016 YE0540 ed422a28eef6cd40fb01a8de5f9190f1 374 Pfam PF02733 Dak1 domain 36 370 7.8E-126 T 22-04-2016 IPR004006 DhaK domain GO:0004371|GO:0006071 YE0540 ed422a28eef6cd40fb01a8de5f9190f1 374 PANTHER PTHR28629:SF2 20 262 2.5E-162 T 22-04-2016 YE0540 ed422a28eef6cd40fb01a8de5f9190f1 374 Gene3D G3DSA:3.40.50.10440 31 201 7.4E-68 T 22-04-2016 YE0540 ed422a28eef6cd40fb01a8de5f9190f1 374 TIGRFAM TIGR02363 dhaK1: dihydroxyacetone kinase, DhaK subunit 20 371 2.2E-148 T 22-04-2016 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 KEGG: 00563+2.7.-.-|UniPathway: UPA00616 YE0540 ed422a28eef6cd40fb01a8de5f9190f1 374 PANTHER PTHR28629 20 262 2.5E-162 T 22-04-2016 YE0540 ed422a28eef6cd40fb01a8de5f9190f1 374 PANTHER PTHR28629:SF2 280 371 2.5E-162 T 22-04-2016 YE3502 3c3ae5e3b04e2179c0c338efc6fc097d 517 PANTHER PTHR30258:SF1 100 459 7.2E-56 T 22-04-2016 YE3502 3c3ae5e3b04e2179c0c338efc6fc097d 517 Pfam PF00437 Type II/IV secretion system protein 98 373 6.6E-41 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 YE3502 3c3ae5e3b04e2179c0c338efc6fc097d 517 SUPERFAMILY SSF52540 74 498 8.8E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3502 3c3ae5e3b04e2179c0c338efc6fc097d 517 Gene3D G3DSA:3.30.450.90 85 195 9.4E-14 T 22-04-2016 YE3502 3c3ae5e3b04e2179c0c338efc6fc097d 517 Gene3D G3DSA:3.40.50.300 201 502 2.8E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3502 3c3ae5e3b04e2179c0c338efc6fc097d 517 PANTHER PTHR30258 100 459 7.2E-56 T 22-04-2016 YE0320 e22b4106a5bff479de314a1ccc46d4f5 928 Pfam PF00675 Insulinase (Peptidase family M16) 54 165 1.1E-23 T 22-04-2016 IPR011765 Peptidase M16, N-terminal YE0320 e22b4106a5bff479de314a1ccc46d4f5 928 SUPERFAMILY SSF63411 349 464 1.08E-5 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 YE0320 e22b4106a5bff479de314a1ccc46d4f5 928 Gene3D G3DSA:3.30.830.10 25 244 5.0E-43 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 YE0320 e22b4106a5bff479de314a1ccc46d4f5 928 SUPERFAMILY SSF63411 515 728 1.04E-16 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 YE0320 e22b4106a5bff479de314a1ccc46d4f5 928 PANTHER PTHR11851 5 815 3.1E-71 T 22-04-2016 YE0320 e22b4106a5bff479de314a1ccc46d4f5 928 SUPERFAMILY SSF63411 33 249 1.16E-43 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 YE0320 e22b4106a5bff479de314a1ccc46d4f5 928 Gene3D G3DSA:3.30.830.10 514 723 1.5E-12 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 YE0320 e22b4106a5bff479de314a1ccc46d4f5 928 Gene3D G3DSA:3.30.830.10 754 920 2.6E-9 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 YE0320 e22b4106a5bff479de314a1ccc46d4f5 928 Pfam PF05193 Peptidase M16 inactive domain 211 386 8.1E-6 T 22-04-2016 IPR007863 Peptidase M16, C-terminal YE0320 e22b4106a5bff479de314a1ccc46d4f5 928 Pfam PF05193 Peptidase M16 inactive domain 682 859 4.5E-12 T 22-04-2016 IPR007863 Peptidase M16, C-terminal YE0320 e22b4106a5bff479de314a1ccc46d4f5 928 PANTHER PTHR11851:SF144 5 815 3.1E-71 T 22-04-2016 YE0320 e22b4106a5bff479de314a1ccc46d4f5 928 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 64 87 - T 22-04-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 YE0320 e22b4106a5bff479de314a1ccc46d4f5 928 SUPERFAMILY SSF63411 754 922 2.17E-16 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 YE0306 44d8f1fd74d6cb4003de1a6e5495d321 389 PANTHER PTHR17630 168 280 1.6E-17 T 22-04-2016 YE0306 44d8f1fd74d6cb4003de1a6e5495d321 389 PANTHER PTHR17630 117 143 1.6E-17 T 22-04-2016 YE0306 44d8f1fd74d6cb4003de1a6e5495d321 389 PANTHER PTHR17630 312 346 1.6E-17 T 22-04-2016 YE0306 44d8f1fd74d6cb4003de1a6e5495d321 389 SUPERFAMILY SSF53474 98 142 2.72E-37 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE0306 44d8f1fd74d6cb4003de1a6e5495d321 389 SUPERFAMILY SSF53474 167 388 2.72E-37 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE0306 44d8f1fd74d6cb4003de1a6e5495d321 389 Gene3D G3DSA:3.40.50.1820 45 388 2.3E-65 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE0306 44d8f1fd74d6cb4003de1a6e5495d321 389 Pfam PF12715 Abhydrolase family 62 345 8.6E-18 T 22-04-2016 IPR025890 Abhydrolase, bacterial YE3817 b35aa6e9977e10a02a1243efe8e50ad3 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 5.1E-34 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 YE3817 b35aa6e9977e10a02a1243efe8e50ad3 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 5.1E-34 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 YE3817 b35aa6e9977e10a02a1243efe8e50ad3 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 5.1E-34 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 YE3817 b35aa6e9977e10a02a1243efe8e50ad3 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 5.1E-34 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 YE3817 b35aa6e9977e10a02a1243efe8e50ad3 98 Gene3D G3DSA:1.10.10.60 27 98 1.7E-28 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE3817 b35aa6e9977e10a02a1243efe8e50ad3 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 3.7E-14 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YE3817 b35aa6e9977e10a02a1243efe8e50ad3 98 SUPERFAMILY SSF46689 4 98 5.38E-27 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE3817 b35aa6e9977e10a02a1243efe8e50ad3 98 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 33.512 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 YE3817 b35aa6e9977e10a02a1243efe8e50ad3 98 PANTHER PTHR32071 5 98 3.6E-34 T 22-04-2016 YE3817 b35aa6e9977e10a02a1243efe8e50ad3 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 8.3E-13 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YE3817 b35aa6e9977e10a02a1243efe8e50ad3 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 8.3E-13 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YE3817 b35aa6e9977e10a02a1243efe8e50ad3 98 PIRSF PIRSF002097 1 98 7.0E-46 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 YE3684 e14d1d30bb2403342834cee91f29d43e 612 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 571 597 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE3684 e14d1d30bb2403342834cee91f29d43e 612 Gene3D G3DSA:1.10.10.10 542 611 1.1E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3684 e14d1d30bb2403342834cee91f29d43e 612 SUPERFAMILY SSF88659 508 610 2.32E-25 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE3684 e14d1d30bb2403342834cee91f29d43e 612 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 611 46.97 T 22-04-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 YE3684 e14d1d30bb2403342834cee91f29d43e 612 SUPERFAMILY SSF88946 115 445 3.14E-102 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE3684 e14d1d30bb2403342834cee91f29d43e 612 SUPERFAMILY SSF88659 451 524 1.54E-20 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE3684 e14d1d30bb2403342834cee91f29d43e 612 PANTHER PTHR30603:SF0 325 611 9.8E-253 T 22-04-2016 YE3684 e14d1d30bb2403342834cee91f29d43e 612 PANTHER PTHR30603:SF0 1 152 9.8E-253 T 22-04-2016 YE3684 e14d1d30bb2403342834cee91f29d43e 612 Pfam PF00140 Sigma-70 factor, region 1.2 98 128 1.4E-12 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE3684 e14d1d30bb2403342834cee91f29d43e 612 PANTHER PTHR30603 325 611 9.8E-253 T 22-04-2016 YE3684 e14d1d30bb2403342834cee91f29d43e 612 PANTHER PTHR30603 1 152 9.8E-253 T 22-04-2016 YE3684 e14d1d30bb2403342834cee91f29d43e 612 Pfam PF04545 Sigma-70, region 4 546 599 8.9E-19 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE3684 e14d1d30bb2403342834cee91f29d43e 612 Gene3D G3DSA:1.10.601.10 112 447 1.0E-138 T 22-04-2016 YE3684 e14d1d30bb2403342834cee91f29d43e 612 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 374 610 7.8E-121 T 22-04-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 YE3684 e14d1d30bb2403342834cee91f29d43e 612 PRINTS PR00046 Major sigma-70 factor signature 402 415 6.3E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE3684 e14d1d30bb2403342834cee91f29d43e 612 PRINTS PR00046 Major sigma-70 factor signature 586 597 6.3E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE3684 e14d1d30bb2403342834cee91f29d43e 612 PRINTS PR00046 Major sigma-70 factor signature 550 562 6.3E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE3684 e14d1d30bb2403342834cee91f29d43e 612 PRINTS PR00046 Major sigma-70 factor signature 426 434 6.3E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE3684 e14d1d30bb2403342834cee91f29d43e 612 PRINTS PR00046 Major sigma-70 factor signature 571 586 6.3E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE3684 e14d1d30bb2403342834cee91f29d43e 612 Pfam PF04546 Sigma-70, non-essential region 139 347 2.5E-75 T 22-04-2016 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE3684 e14d1d30bb2403342834cee91f29d43e 612 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 402 415 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE3684 e14d1d30bb2403342834cee91f29d43e 612 Pfam PF04542 Sigma-70 region 2 378 447 1.7E-21 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE3684 e14d1d30bb2403342834cee91f29d43e 612 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 374 599 3.5E-38 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE3684 e14d1d30bb2403342834cee91f29d43e 612 Gene3D G3DSA:1.10.10.10 451 502 1.8E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3684 e14d1d30bb2403342834cee91f29d43e 612 Pfam PF04539 Sigma-70 region 3 457 532 3.4E-29 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE3684 e14d1d30bb2403342834cee91f29d43e 612 Pfam PF03979 Sigma-70 factor, region 1.1 4 79 1.7E-30 T 22-04-2016 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 YE0042 93a9bed854a8ef549c9e652e7cb6eff3 404 PANTHER PTHR36178:SF1 1 402 5.6E-209 T 22-04-2016 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 YE0042 93a9bed854a8ef549c9e652e7cb6eff3 404 PANTHER PTHR36178 1 402 5.6E-209 T 22-04-2016 YE0042 93a9bed854a8ef549c9e652e7cb6eff3 404 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 2 397 1.5E-192 T 22-04-2016 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 YE0042 93a9bed854a8ef549c9e652e7cb6eff3 404 Pfam PF03616 Sodium/glutamate symporter 2 366 1.2E-161 T 22-04-2016 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 YE3138 7909e79135835edbd89a6325fa20d2f6 192 Pfam PF03923 Uncharacterized lipoprotein 29 188 2.1E-54 T 22-04-2016 IPR005619 Uncharacterised protein family, YajG YE3138 7909e79135835edbd89a6325fa20d2f6 192 Pfam PF08139 Prokaryotic membrane lipoprotein lipid attachment site 1 20 4.2E-5 T 22-04-2016 IPR012640 Membrane lipoprotein, lipid attachment site YE3019 3ea4647f7fbc0b23c21dfb095cc5b24e 590 SUPERFAMILY SSF90123 10 324 1.19E-56 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YE3019 3ea4647f7fbc0b23c21dfb095cc5b24e 590 Pfam PF00005 ABC transporter 362 511 2.0E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE3019 3ea4647f7fbc0b23c21dfb095cc5b24e 590 Gene3D G3DSA:1.20.1560.10 9 334 3.5E-59 T 22-04-2016 YE3019 3ea4647f7fbc0b23c21dfb095cc5b24e 590 Gene3D G3DSA:3.40.50.300 346 576 1.9E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3019 3ea4647f7fbc0b23c21dfb095cc5b24e 590 ProSitePatterns PS00211 ABC transporters family signature. 483 497 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE3019 3ea4647f7fbc0b23c21dfb095cc5b24e 590 SMART SM00382 371 557 9.5E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain YE3019 3ea4647f7fbc0b23c21dfb095cc5b24e 590 Pfam PF00664 ABC transporter transmembrane region 26 300 9.6E-36 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YE3019 3ea4647f7fbc0b23c21dfb095cc5b24e 590 PANTHER PTHR24221:SF250 1 590 0.0 T 22-04-2016 YE3019 3ea4647f7fbc0b23c21dfb095cc5b24e 590 PANTHER PTHR24221 1 590 0.0 T 22-04-2016 YE3019 3ea4647f7fbc0b23c21dfb095cc5b24e 590 SUPERFAMILY SSF52540 335 582 1.67E-92 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0736 af0a21c3922d03c67e3bc39835af8318 114 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 114 36.592 T 22-04-2016 IPR023063 FeS cluster insertion protein ErpA GO:0016226 YE0736 af0a21c3922d03c67e3bc39835af8318 114 PANTHER PTHR10072 9 114 2.2E-49 T 22-04-2016 YE0736 af0a21c3922d03c67e3bc39835af8318 114 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 95 112 - T 22-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site YE0736 af0a21c3922d03c67e3bc39835af8318 114 SUPERFAMILY SSF89360 8 103 5.89E-31 T 22-04-2016 IPR000361 FeS cluster biogenesis YE0736 af0a21c3922d03c67e3bc39835af8318 114 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 9 113 4.9E-39 T 22-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 YE0736 af0a21c3922d03c67e3bc39835af8318 114 Gene3D G3DSA:2.60.300.12 9 104 8.3E-32 T 22-04-2016 IPR000361 FeS cluster biogenesis YE0736 af0a21c3922d03c67e3bc39835af8318 114 Pfam PF01521 Iron-sulphur cluster biosynthesis 9 109 3.7E-20 T 22-04-2016 IPR000361 FeS cluster biogenesis YE2877 39a468a9f9cf9a05511eb27a97f88369 309 Gene3D G3DSA:3.40.190.10 53 131 7.0E-6 T 22-04-2016 YE2877 39a468a9f9cf9a05511eb27a97f88369 309 PANTHER PTHR35841:SF1 4 306 1.5E-92 T 22-04-2016 YE2877 39a468a9f9cf9a05511eb27a97f88369 309 SUPERFAMILY SSF53850 44 299 3.72E-48 T 22-04-2016 YE2877 39a468a9f9cf9a05511eb27a97f88369 309 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 1 268 1.8E-84 T 22-04-2016 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 YE2877 39a468a9f9cf9a05511eb27a97f88369 309 PANTHER PTHR35841 4 306 1.5E-92 T 22-04-2016 YE2877 39a468a9f9cf9a05511eb27a97f88369 309 Gene3D G3DSA:3.40.190.10 132 214 1.6E-10 T 22-04-2016 YE2877 39a468a9f9cf9a05511eb27a97f88369 309 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 44 292 3.0E-47 T 22-04-2016 YE2877 39a468a9f9cf9a05511eb27a97f88369 309 TIGRFAM TIGR03431 PhnD: phosphonate ABC transporter, periplasmic phosphonate binding protein 1 305 4.2E-100 T 22-04-2016 IPR017797 Phosphonate ABC transporter, periplasmic substrate-binding protein GO:0015604|GO:0015716|GO:0043190 YE3009 da759da528bbff6070f6a250ec5bab45 71 PANTHER PTHR33162:SF2 1 70 2.2E-31 T 22-04-2016 YE3009 da759da528bbff6070f6a250ec5bab45 71 PANTHER PTHR33162 1 70 2.2E-31 T 22-04-2016 YE3009 da759da528bbff6070f6a250ec5bab45 71 Hamap MF_00903 Probable Sec-independent protein translocase protein TatE [tatE]. 1 71 29.773 T 22-04-2016 IPR024905 Sec-independent protein translocase protein TatE YE3009 da759da528bbff6070f6a250ec5bab45 71 Pfam PF02416 mttA/Hcf106 family 4 46 7.0E-11 T 22-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 YE3009 da759da528bbff6070f6a250ec5bab45 71 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 68 18.938 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 YE3009 da759da528bbff6070f6a250ec5bab45 71 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 47 5.3E-18 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 YE3134 1ee426d574edff9b15dee8e3f9895885 207 PANTHER PTHR10381 2 206 2.9E-143 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA YE3134 1ee426d574edff9b15dee8e3f9895885 207 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 14 205 1.9E-109 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 YE3134 1ee426d574edff9b15dee8e3f9895885 207 SUPERFAMILY SSF52096 23 206 9.29E-76 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YE3134 1ee426d574edff9b15dee8e3f9895885 207 Pfam PF00574 Clp protease 25 205 3.3E-90 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA YE3134 1ee426d574edff9b15dee8e3f9895885 207 PANTHER PTHR10381:SF22 2 206 2.9E-143 T 22-04-2016 YE3134 1ee426d574edff9b15dee8e3f9895885 207 PRINTS PR00127 Clp protease catalytic subunit P signature 181 200 3.3E-53 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 YE3134 1ee426d574edff9b15dee8e3f9895885 207 PRINTS PR00127 Clp protease catalytic subunit P signature 32 47 3.3E-53 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 YE3134 1ee426d574edff9b15dee8e3f9895885 207 PRINTS PR00127 Clp protease catalytic subunit P signature 124 143 3.3E-53 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 YE3134 1ee426d574edff9b15dee8e3f9895885 207 PRINTS PR00127 Clp protease catalytic subunit P signature 72 92 3.3E-53 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 YE3134 1ee426d574edff9b15dee8e3f9895885 207 PRINTS PR00127 Clp protease catalytic subunit P signature 103 120 3.3E-53 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 YE3134 1ee426d574edff9b15dee8e3f9895885 207 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 103 114 - T 22-04-2016 IPR018215 ClpP, Ser active site YE3134 1ee426d574edff9b15dee8e3f9895885 207 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 16 206 44.366 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 YE3134 1ee426d574edff9b15dee8e3f9895885 207 Gene3D G3DSA:3.90.226.10 16 205 2.5E-91 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YE3134 1ee426d574edff9b15dee8e3f9895885 207 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 125 138 - T 22-04-2016 IPR033135 ClpP, histidine active site YE2907 b0c926325e13da8f77c0e0bc4860107e 350 Hamap MF_01694 Biotin synthase [bioB]. 5 313 41.452 T 22-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 YE2907 b0c926325e13da8f77c0e0bc4860107e 350 Gene3D G3DSA:3.20.20.70 6 314 5.2E-107 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YE2907 b0c926325e13da8f77c0e0bc4860107e 350 TIGRFAM TIGR00433 bioB: biotin synthase 14 310 1.3E-125 T 22-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 YE2907 b0c926325e13da8f77c0e0bc4860107e 350 SMART SM00729 43 255 6.7E-41 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 YE2907 b0c926325e13da8f77c0e0bc4860107e 350 PANTHER PTHR22976 6 349 5.8E-195 T 22-04-2016 YE2907 b0c926325e13da8f77c0e0bc4860107e 350 PIRSF PIRSF001619 1 319 1.5E-139 T 22-04-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 YE2907 b0c926325e13da8f77c0e0bc4860107e 350 SMART SM00876 220 312 2.1E-49 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 YE2907 b0c926325e13da8f77c0e0bc4860107e 350 PANTHER PTHR22976:SF1 6 349 5.8E-195 T 22-04-2016 YE2907 b0c926325e13da8f77c0e0bc4860107e 350 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 1.4E-20 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 YE2907 b0c926325e13da8f77c0e0bc4860107e 350 Pfam PF04055 Radical SAM superfamily 50 202 4.2E-17 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 YE2907 b0c926325e13da8f77c0e0bc4860107e 350 SUPERFAMILY SSF102114 6 313 7.85E-95 T 22-04-2016 YE0665 b3526afb204f6f7e25ffba6e4695d329 106 Hamap MF_00910 Cell division protein FtsL [ftsL]. 20 103 16.437 T 22-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 YE0665 b3526afb204f6f7e25ffba6e4695d329 106 PANTHER PTHR37479:SF1 1 106 1.8E-40 T 22-04-2016 YE0665 b3526afb204f6f7e25ffba6e4695d329 106 PANTHER PTHR37479 1 106 1.8E-40 T 22-04-2016 YE0665 b3526afb204f6f7e25ffba6e4695d329 106 Pfam PF04999 Cell division protein FtsL 11 104 1.4E-33 T 22-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 YE0665 b3526afb204f6f7e25ffba6e4695d329 106 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 22 103 3.8E-27 T 22-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 YE3481 d13b2dcbbd04cb173d9cb9d6b07b62d8 78 Pfam PF07362 Post-segregation antitoxin CcdA 9 78 1.3E-26 T 22-04-2016 IPR009956 Post-segregation antitoxin CcdA YE3330 bf65212ad47843c5e78aac288982a6b3 752 Pfam PF01568 Molydopterin dinucleotide binding domain 625 745 2.6E-25 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 YE3330 bf65212ad47843c5e78aac288982a6b3 752 SUPERFAMILY SSF50692 618 752 2.07E-34 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain YE3330 bf65212ad47843c5e78aac288982a6b3 752 Gene3D G3DSA:3.90.55.10 455 557 8.6E-36 T 22-04-2016 YE3330 bf65212ad47843c5e78aac288982a6b3 752 PANTHER PTHR11615 18 368 1.1E-258 T 22-04-2016 YE3330 bf65212ad47843c5e78aac288982a6b3 752 PANTHER PTHR11615 398 751 1.1E-258 T 22-04-2016 YE3330 bf65212ad47843c5e78aac288982a6b3 752 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 453 470 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 YE3330 bf65212ad47843c5e78aac288982a6b3 752 SUPERFAMILY SSF53706 10 627 5.1E-153 T 22-04-2016 YE3330 bf65212ad47843c5e78aac288982a6b3 752 Gene3D G3DSA:3.40.228.10 154 361 3.8E-46 T 22-04-2016 YE3330 bf65212ad47843c5e78aac288982a6b3 752 PANTHER PTHR11615:SF102 18 368 1.1E-258 T 22-04-2016 YE3330 bf65212ad47843c5e78aac288982a6b3 752 PANTHER PTHR11615:SF102 398 751 1.1E-258 T 22-04-2016 YE3330 bf65212ad47843c5e78aac288982a6b3 752 Gene3D G3DSA:3.40.50.740 46 147 2.3E-41 T 22-04-2016 YE3330 bf65212ad47843c5e78aac288982a6b3 752 Gene3D G3DSA:3.40.50.740 362 454 2.3E-41 T 22-04-2016 YE3330 bf65212ad47843c5e78aac288982a6b3 752 Pfam PF00384 Molybdopterin oxidoreductase 52 509 6.8E-61 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 YE3330 bf65212ad47843c5e78aac288982a6b3 752 Gene3D G3DSA:2.40.40.20 599 752 7.9E-49 T 22-04-2016 YE3122 11748d7ca2b4823ba30d95ae6adf3f56 588 Pfam PF00664 ABC transporter transmembrane region 21 291 2.9E-38 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YE3122 11748d7ca2b4823ba30d95ae6adf3f56 588 Pfam PF00005 ABC transporter 352 500 3.8E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE3122 11748d7ca2b4823ba30d95ae6adf3f56 588 PANTHER PTHR24221 2 580 5.8E-197 T 22-04-2016 YE3122 11748d7ca2b4823ba30d95ae6adf3f56 588 SUPERFAMILY SSF90123 7 319 1.31E-70 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YE3122 11748d7ca2b4823ba30d95ae6adf3f56 588 Gene3D G3DSA:1.20.1560.10 7 319 1.1E-69 T 22-04-2016 YE3122 11748d7ca2b4823ba30d95ae6adf3f56 588 SUPERFAMILY SSF52540 327 572 5.23E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3122 11748d7ca2b4823ba30d95ae6adf3f56 588 SMART SM00382 361 547 8.0E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain YE3122 11748d7ca2b4823ba30d95ae6adf3f56 588 Gene3D G3DSA:3.40.50.300 341 565 1.5E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3122 11748d7ca2b4823ba30d95ae6adf3f56 588 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE1743 6e5e3fd3ebb24e4b4770a344fe7ff0dc 368 PANTHER PTHR11019:SF105 21 366 3.2E-45 T 22-04-2016 YE1743 6e5e3fd3ebb24e4b4770a344fe7ff0dc 368 PANTHER PTHR11019 21 366 3.2E-45 T 22-04-2016 YE1743 6e5e3fd3ebb24e4b4770a344fe7ff0dc 368 Gene3D G3DSA:1.10.10.60 265 318 3.1E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE1743 6e5e3fd3ebb24e4b4770a344fe7ff0dc 368 SUPERFAMILY SSF46689 267 315 5.82E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE1743 6e5e3fd3ebb24e4b4770a344fe7ff0dc 368 SUPERFAMILY SSF46689 318 366 3.76E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE1743 6e5e3fd3ebb24e4b4770a344fe7ff0dc 368 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 333 348 1.9E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YE1743 6e5e3fd3ebb24e4b4770a344fe7ff0dc 368 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 348 364 1.9E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YE1743 6e5e3fd3ebb24e4b4770a344fe7ff0dc 368 Gene3D G3DSA:1.10.10.60 319 366 2.3E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE1743 6e5e3fd3ebb24e4b4770a344fe7ff0dc 368 SMART SM00342 281 364 1.8E-28 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YE1743 6e5e3fd3ebb24e4b4770a344fe7ff0dc 368 Pfam PF12833 Helix-turn-helix domain 287 366 1.8E-21 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YE0344 1ab61a02e10a580541bb306ad4d5e02b 324 PANTHER PTHR30386 3 305 3.1E-49 T 22-04-2016 YE0344 1ab61a02e10a580541bb306ad4d5e02b 324 Pfam PF13437 HlyD family secretion protein 216 308 5.4E-12 T 22-04-2016 YE0344 1ab61a02e10a580541bb306ad4d5e02b 324 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 32 52 1.9E-7 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YE0344 1ab61a02e10a580541bb306ad4d5e02b 324 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 261 285 1.9E-7 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YE0344 1ab61a02e10a580541bb306ad4d5e02b 324 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 227 248 1.9E-7 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 YE0344 1ab61a02e10a580541bb306ad4d5e02b 324 Gene3D G3DSA:2.40.50.100 213 246 3.3E-12 T 22-04-2016 YE0344 1ab61a02e10a580541bb306ad4d5e02b 324 Gene3D G3DSA:2.40.50.100 21 54 3.3E-12 T 22-04-2016 YE0344 1ab61a02e10a580541bb306ad4d5e02b 324 PANTHER PTHR30386:SF8 3 305 3.1E-49 T 22-04-2016 YE0414 e46a356fa878998da1b74e2bcad66d82 311 Gene3D G3DSA:3.90.110.10 147 311 3.2E-62 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 YE0414 e46a356fa878998da1b74e2bcad66d82 311 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 311 5.8E-136 T 22-04-2016 IPR010097 Malate dehydrogenase, type 1 GO:0006108|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 YE0414 e46a356fa878998da1b74e2bcad66d82 311 PANTHER PTHR11540 1 311 9.2E-238 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 YE0414 e46a356fa878998da1b74e2bcad66d82 311 PIRSF PIRSF000102 1 310 1.0E-59 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 YE0414 e46a356fa878998da1b74e2bcad66d82 311 PANTHER PTHR11540:SF22 1 311 9.2E-238 T 22-04-2016 YE0414 e46a356fa878998da1b74e2bcad66d82 311 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 22-04-2016 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: REACT_474 YE0414 e46a356fa878998da1b74e2bcad66d82 311 SUPERFAMILY SSF51735 1 145 1.73E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain YE0414 e46a356fa878998da1b74e2bcad66d82 311 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 310 1.9E-50 T 22-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 YE0414 e46a356fa878998da1b74e2bcad66d82 311 SUPERFAMILY SSF56327 146 310 2.78E-41 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 YE0414 e46a356fa878998da1b74e2bcad66d82 311 Gene3D G3DSA:3.40.50.720 1 145 5.1E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain YE0414 e46a356fa878998da1b74e2bcad66d82 311 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 2.6E-45 T 22-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 YE0414 e46a356fa878998da1b74e2bcad66d82 311 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 311 59.495 T 22-04-2016 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 YE0794 8ee0128e5f4e9a3c481b07c8006bede7 468 SUPERFAMILY SSF56954 2 458 3.53E-88 T 22-04-2016 YE0794 8ee0128e5f4e9a3c481b07c8006bede7 468 Pfam PF02321 Outer membrane efflux protein 276 454 7.1E-19 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 YE0794 8ee0128e5f4e9a3c481b07c8006bede7 468 Pfam PF02321 Outer membrane efflux protein 64 248 1.3E-23 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 YE0794 8ee0128e5f4e9a3c481b07c8006bede7 468 Gene3D G3DSA:1.20.1600.10 54 90 1.2E-75 T 22-04-2016 YE0794 8ee0128e5f4e9a3c481b07c8006bede7 468 Gene3D G3DSA:1.20.1600.10 136 307 1.2E-75 T 22-04-2016 YE0794 8ee0128e5f4e9a3c481b07c8006bede7 468 Gene3D G3DSA:1.20.1600.10 343 456 1.2E-75 T 22-04-2016 YE0794 8ee0128e5f4e9a3c481b07c8006bede7 468 Gene3D G3DSA:2.20.200.10 116 135 4.4E-9 T 22-04-2016 YE0794 8ee0128e5f4e9a3c481b07c8006bede7 468 Gene3D G3DSA:2.20.200.10 308 338 4.4E-9 T 22-04-2016 YE0794 8ee0128e5f4e9a3c481b07c8006bede7 468 PANTHER PTHR30203 1 456 2.1E-88 T 22-04-2016 YE0794 8ee0128e5f4e9a3c481b07c8006bede7 468 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 12 456 6.4E-77 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 YE0794 8ee0128e5f4e9a3c481b07c8006bede7 468 PANTHER PTHR30203:SF13 1 456 2.1E-88 T 22-04-2016 YE3957 3d2b5ad4561b24ff495be93cacbe313e 405 PANTHER PTHR11986 12 403 2.4E-216 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YE3957 3d2b5ad4561b24ff495be93cacbe313e 405 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 13 400 45.993 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 YE3957 3d2b5ad4561b24ff495be93cacbe313e 405 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 222 259 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YE3957 3d2b5ad4561b24ff495be93cacbe313e 405 Pfam PF00202 Aminotransferase class-III 24 399 8.3E-135 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YE3957 3d2b5ad4561b24ff495be93cacbe313e 405 Gene3D G3DSA:3.90.1150.10 306 400 4.6E-35 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YE3957 3d2b5ad4561b24ff495be93cacbe313e 405 Gene3D G3DSA:3.90.1150.10 13 59 4.6E-35 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YE3957 3d2b5ad4561b24ff495be93cacbe313e 405 Gene3D G3DSA:3.40.640.10 60 302 1.5E-91 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YE3957 3d2b5ad4561b24ff495be93cacbe313e 405 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 16 399 1.7E-153 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 YE3957 3d2b5ad4561b24ff495be93cacbe313e 405 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 7 403 1.7E-207 T 22-04-2016 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 YE3957 3d2b5ad4561b24ff495be93cacbe313e 405 PANTHER PTHR11986:SF71 12 403 2.4E-216 T 22-04-2016 YE3957 3d2b5ad4561b24ff495be93cacbe313e 405 SUPERFAMILY SSF53383 17 400 2.02E-126 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YE3129 68daad62a15ac72628fb575000dfd91f 140 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 76 138 3.0E-25 T 22-04-2016 IPR004509 Competence protein ComEA, helix-hairpin-helix domain YE3129 68daad62a15ac72628fb575000dfd91f 140 Pfam PF12836 Helix-hairpin-helix motif 78 139 6.1E-21 T 22-04-2016 YE3129 68daad62a15ac72628fb575000dfd91f 140 SMART SM00278 88 107 0.34 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 YE3129 68daad62a15ac72628fb575000dfd91f 140 SMART SM00278 118 137 130.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 YE3129 68daad62a15ac72628fb575000dfd91f 140 SUPERFAMILY SSF47781 75 137 2.56E-24 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 YE3129 68daad62a15ac72628fb575000dfd91f 140 Gene3D G3DSA:1.10.150.280 62 137 3.8E-15 T 22-04-2016 YE3129 68daad62a15ac72628fb575000dfd91f 140 PANTHER PTHR21180 78 139 1.0E-22 T 22-04-2016 YE1199 e055b55d62e8e49e6bbe884ffa7b73b0 651 PANTHER PTHR24220:SF86 3 224 1.7E-111 T 22-04-2016 YE1199 e055b55d62e8e49e6bbe884ffa7b73b0 651 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE1199 e055b55d62e8e49e6bbe884ffa7b73b0 651 SMART SM00382 30 217 2.2E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain YE1199 e055b55d62e8e49e6bbe884ffa7b73b0 651 Gene3D G3DSA:3.40.50.300 2 222 1.1E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1199 e055b55d62e8e49e6bbe884ffa7b73b0 651 Pfam PF00005 ABC transporter 21 169 6.1E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE1199 e055b55d62e8e49e6bbe884ffa7b73b0 651 PANTHER PTHR24220 3 224 1.7E-111 T 22-04-2016 YE1199 e055b55d62e8e49e6bbe884ffa7b73b0 651 SUPERFAMILY SSF52540 1 223 5.08E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1199 e055b55d62e8e49e6bbe884ffa7b73b0 651 Pfam PF02687 FtsX-like permease family 530 644 3.8E-19 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 YE1199 e055b55d62e8e49e6bbe884ffa7b73b0 651 Pfam PF12704 MacB-like periplasmic core domain 275 494 1.4E-39 T 22-04-2016 IPR025857 MacB-like periplasmic core domain YE2129 277471e100281033f166f59c2f8ceb40 271 SMART SM00382 39 228 1.6E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain YE2129 277471e100281033f166f59c2f8ceb40 271 SUPERFAMILY SSF52540 5 249 7.24E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2129 277471e100281033f166f59c2f8ceb40 271 PANTHER PTHR24220:SF81 7 255 2.7E-128 T 22-04-2016 YE2129 277471e100281033f166f59c2f8ceb40 271 PANTHER PTHR24220 7 255 2.7E-128 T 22-04-2016 YE2129 277471e100281033f166f59c2f8ceb40 271 Gene3D G3DSA:3.40.50.300 2 252 5.6E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2129 277471e100281033f166f59c2f8ceb40 271 Pfam PF00005 ABC transporter 31 178 4.1E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE2129 277471e100281033f166f59c2f8ceb40 271 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE3802 b8a98cd016fa4ba896563fe96e922ee0 197 Pfam PF02545 Maf-like protein 4 184 9.3E-57 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 YE3802 b8a98cd016fa4ba896563fe96e922ee0 197 SUPERFAMILY SSF52972 2 184 7.19E-59 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like YE3802 b8a98cd016fa4ba896563fe96e922ee0 197 Gene3D G3DSA:3.90.950.10 2 185 1.0E-67 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like YE3802 b8a98cd016fa4ba896563fe96e922ee0 197 PANTHER PTHR11746 120 186 1.4E-14 T 22-04-2016 YE3802 b8a98cd016fa4ba896563fe96e922ee0 197 Hamap MF_00528 Septum formation protein Maf [maf]. 3 189 31.181 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 YE3802 b8a98cd016fa4ba896563fe96e922ee0 197 PIRSF PIRSF006305 1 191 2.8E-50 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 YE3802 b8a98cd016fa4ba896563fe96e922ee0 197 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 182 3.2E-63 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 YE2773 49a967c7d46c2fbfe4dd6d0b90d534ef 468 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 5 468 8.8E-228 T 22-04-2016 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 YE2773 49a967c7d46c2fbfe4dd6d0b90d534ef 468 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 179 467 1.1E-131 T 22-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 YE2773 49a967c7d46c2fbfe4dd6d0b90d534ef 468 SUPERFAMILY SSF48179 177 467 5.1E-132 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 YE2773 49a967c7d46c2fbfe4dd6d0b90d534ef 468 Gene3D G3DSA:3.40.50.720 1 180 4.4E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2773 49a967c7d46c2fbfe4dd6d0b90d534ef 468 PANTHER PTHR11811:SF25 1 467 7.2E-303 T 22-04-2016 YE2773 49a967c7d46c2fbfe4dd6d0b90d534ef 468 PANTHER PTHR11811 1 467 7.2E-303 T 22-04-2016 YE2773 49a967c7d46c2fbfe4dd6d0b90d534ef 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 1.5E-89 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 YE2773 49a967c7d46c2fbfe4dd6d0b90d534ef 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 168 196 1.5E-89 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 YE2773 49a967c7d46c2fbfe4dd6d0b90d534ef 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 1.5E-89 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 YE2773 49a967c7d46c2fbfe4dd6d0b90d534ef 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 357 379 1.5E-89 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 YE2773 49a967c7d46c2fbfe4dd6d0b90d534ef 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 4 27 1.5E-89 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 YE2773 49a967c7d46c2fbfe4dd6d0b90d534ef 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 1.5E-89 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 YE2773 49a967c7d46c2fbfe4dd6d0b90d534ef 468 SMART SM01350 179 468 9.9E-224 T 22-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 YE2773 49a967c7d46c2fbfe4dd6d0b90d534ef 468 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 174 8.3E-52 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 YE2773 49a967c7d46c2fbfe4dd6d0b90d534ef 468 PIRSF PIRSF000109 1 468 7.8E-241 T 22-04-2016 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 YE2773 49a967c7d46c2fbfe4dd6d0b90d534ef 468 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 22-04-2016 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 YE2773 49a967c7d46c2fbfe4dd6d0b90d534ef 468 Gene3D G3DSA:1.20.5.320 437 467 5.0E-22 T 22-04-2016 IPR012284 6-phosphogluconate dehydrogenase, domain 3 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 YE2773 49a967c7d46c2fbfe4dd6d0b90d534ef 468 Gene3D G3DSA:1.10.1040.10 181 434 2.8E-117 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 YE2773 49a967c7d46c2fbfe4dd6d0b90d534ef 468 SUPERFAMILY SSF51735 4 172 3.26E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain YE1722 65f8042a1076c88f411daad2cfcd916f 373 Gene3D G3DSA:3.40.50.620 4 212 5.2E-98 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YE1722 65f8042a1076c88f411daad2cfcd916f 373 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 7 362 40.835 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 YE1722 65f8042a1076c88f411daad2cfcd916f 373 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 7 361 1.1E-156 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 YE1722 65f8042a1076c88f411daad2cfcd916f 373 SUPERFAMILY SSF52402 5 245 1.06E-56 T 22-04-2016 YE1722 65f8042a1076c88f411daad2cfcd916f 373 Gene3D G3DSA:2.30.30.280 214 281 1.2E-33 T 22-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 YE1722 65f8042a1076c88f411daad2cfcd916f 373 Gene3D G3DSA:2.40.30.10 283 365 1.8E-33 T 22-04-2016 YE1722 65f8042a1076c88f411daad2cfcd916f 373 PANTHER PTHR11933:SF10 1 366 2.2E-220 T 22-04-2016 YE1722 65f8042a1076c88f411daad2cfcd916f 373 PANTHER PTHR11933 1 366 2.2E-220 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 YE1722 65f8042a1076c88f411daad2cfcd916f 373 Pfam PF03054 tRNA methyl transferase 7 361 2.0E-143 T 22-04-2016 YE0691 51de0fb2f3049d1ff77e067422e2a0a8 302 SUPERFAMILY SSF51690 130 301 2.47E-56 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 YE0691 51de0fb2f3049d1ff77e067422e2a0a8 302 PIRSF PIRSF006250 17 302 1.5E-102 T 22-04-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD YE0691 51de0fb2f3049d1ff77e067422e2a0a8 302 PANTHER PTHR32179 1 301 1.9E-127 T 22-04-2016 YE0691 51de0fb2f3049d1ff77e067422e2a0a8 302 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 130 300 9.8E-59 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 YE0691 51de0fb2f3049d1ff77e067422e2a0a8 302 Gene3D G3DSA:3.90.1170.20 19 150 1.1E-48 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 YE0691 51de0fb2f3049d1ff77e067422e2a0a8 302 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 43 128 4.7E-25 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 YE0691 51de0fb2f3049d1ff77e067422e2a0a8 302 SUPERFAMILY SSF54675 14 129 7.85E-31 T 22-04-2016 YE0691 51de0fb2f3049d1ff77e067422e2a0a8 302 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 27 301 5.5E-96 T 22-04-2016 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|UniPathway: UPA00253 YE0691 51de0fb2f3049d1ff77e067422e2a0a8 302 Gene3D G3DSA:3.20.20.70 151 290 2.5E-58 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YE1371 255bca48e8803a008739e910ce4694ae 102 Pfam PF05957 Bacterial protein of unknown function (DUF883) 10 102 6.4E-31 T 22-04-2016 IPR010279 Protein of unknown function DUF883, ElaB YE1371 255bca48e8803a008739e910ce4694ae 102 PANTHER PTHR35893 1 102 4.8E-59 T 22-04-2016 YE1371 255bca48e8803a008739e910ce4694ae 102 PANTHER PTHR35893:SF1 1 102 4.8E-59 T 22-04-2016 YE3829 0d0206a3073561c9d67a5919961891b2 306 PIRSF PIRSF026649 3 306 9.5E-94 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 YE3829 0d0206a3073561c9d67a5919961891b2 306 Hamap MF_01943 Lipid A biosynthesis palmitoleoyltransferase [lpxP]. 3 306 69.042 T 22-04-2016 IPR030857 Lipid A biosynthesis palmitoleoyltransferase, LpxP GO:0008951|GO:0009409|GO:0036104 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 YE3829 0d0206a3073561c9d67a5919961891b2 306 PANTHER PTHR30606:SF7 2 306 1.4E-234 T 22-04-2016 YE3829 0d0206a3073561c9d67a5919961891b2 306 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 6 306 1.8E-136 T 22-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 YE3829 0d0206a3073561c9d67a5919961891b2 306 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 6 297 1.8E-101 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 YE3829 0d0206a3073561c9d67a5919961891b2 306 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 4 306 50.112 T 22-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 YE3829 0d0206a3073561c9d67a5919961891b2 306 PANTHER PTHR30606 2 306 1.4E-234 T 22-04-2016 YE1509 d8b7dd7bb15b66324f443227e2d6388b 340 PANTHER PTHR19370 13 264 2.2E-131 T 22-04-2016 YE1509 d8b7dd7bb15b66324f443227e2d6388b 340 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 267 332 5.5E-13 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YE1509 d8b7dd7bb15b66324f443227e2d6388b 340 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 291 299 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 YE1509 d8b7dd7bb15b66324f443227e2d6388b 340 Pfam PF00175 Oxidoreductase NAD-binding domain 122 225 2.6E-14 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 YE1509 d8b7dd7bb15b66324f443227e2d6388b 340 SUPERFAMILY SSF63380 17 110 5.79E-20 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 YE1509 d8b7dd7bb15b66324f443227e2d6388b 340 SUPERFAMILY SSF54292 235 338 5.9E-24 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YE1509 d8b7dd7bb15b66324f443227e2d6388b 340 Gene3D G3DSA:3.40.50.80 103 237 6.7E-29 T 22-04-2016 YE1509 d8b7dd7bb15b66324f443227e2d6388b 340 SUPERFAMILY SSF52343 116 244 4.19E-30 T 22-04-2016 YE1509 d8b7dd7bb15b66324f443227e2d6388b 340 Gene3D G3DSA:3.10.20.30 238 339 1.1E-25 T 22-04-2016 IPR012675 Beta-grasp domain YE1509 d8b7dd7bb15b66324f443227e2d6388b 340 PANTHER PTHR19370:SF89 13 264 2.2E-131 T 22-04-2016 YE1509 d8b7dd7bb15b66324f443227e2d6388b 340 Gene3D G3DSA:2.40.30.10 17 102 2.9E-17 T 22-04-2016 YE1509 d8b7dd7bb15b66324f443227e2d6388b 340 PRINTS PR00410 Phenol hydroxylase reductase family signature 121 140 1.3E-5 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 YE1509 d8b7dd7bb15b66324f443227e2d6388b 340 PRINTS PR00410 Phenol hydroxylase reductase family signature 43 55 1.3E-5 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 YE1509 d8b7dd7bb15b66324f443227e2d6388b 340 PRINTS PR00410 Phenol hydroxylase reductase family signature 212 220 1.3E-5 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 YE1509 d8b7dd7bb15b66324f443227e2d6388b 340 Pfam PF00970 Oxidoreductase FAD-binding domain 40 110 4.2E-8 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain YE0490 d5ff80571e87f9548b1d3e9dff45b6de 349 PANTHER PTHR30465:SF77 207 349 7.8E-236 T 22-04-2016 YE0490 d5ff80571e87f9548b1d3e9dff45b6de 349 PANTHER PTHR30465:SF77 2 183 7.8E-236 T 22-04-2016 YE0490 d5ff80571e87f9548b1d3e9dff45b6de 349 PANTHER PTHR30465 207 349 7.8E-236 T 22-04-2016 YE0490 d5ff80571e87f9548b1d3e9dff45b6de 349 PANTHER PTHR30465 2 183 7.8E-236 T 22-04-2016 YE0490 d5ff80571e87f9548b1d3e9dff45b6de 349 SUPERFAMILY SSF161098 106 174 1.2E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE0490 d5ff80571e87f9548b1d3e9dff45b6de 349 SUPERFAMILY SSF161098 213 337 1.2E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE0490 d5ff80571e87f9548b1d3e9dff45b6de 349 Gene3D G3DSA:1.10.3720.10 102 177 1.6E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE0490 d5ff80571e87f9548b1d3e9dff45b6de 349 Gene3D G3DSA:1.10.3720.10 216 346 1.6E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE0490 d5ff80571e87f9548b1d3e9dff45b6de 349 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 128 349 4.2E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE2892 5ea590cc2a283ad9e671bf7902061902 583 Gene3D G3DSA:3.40.50.300 325 551 3.9E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2892 5ea590cc2a283ad9e671bf7902061902 583 Gene3D G3DSA:3.40.50.300 6 233 2.6E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2892 5ea590cc2a283ad9e671bf7902061902 583 PANTHER PTHR24220 9 231 7.1E-231 T 22-04-2016 YE2892 5ea590cc2a283ad9e671bf7902061902 583 PANTHER PTHR24220 347 451 7.1E-231 T 22-04-2016 YE2892 5ea590cc2a283ad9e671bf7902061902 583 PANTHER PTHR24220 254 302 7.1E-231 T 22-04-2016 YE2892 5ea590cc2a283ad9e671bf7902061902 583 SMART SM00382 356 537 2.4E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain YE2892 5ea590cc2a283ad9e671bf7902061902 583 SMART SM00382 34 268 1.5E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain YE2892 5ea590cc2a283ad9e671bf7902061902 583 Pfam PF00005 ABC transporter 28 167 4.3E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE2892 5ea590cc2a283ad9e671bf7902061902 583 Pfam PF00005 ABC transporter 348 491 2.4E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE2892 5ea590cc2a283ad9e671bf7902061902 583 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE2892 5ea590cc2a283ad9e671bf7902061902 583 SUPERFAMILY SSF52540 6 230 1.64E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2892 5ea590cc2a283ad9e671bf7902061902 583 SUPERFAMILY SSF52540 330 551 2.5E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2892 5ea590cc2a283ad9e671bf7902061902 583 PANTHER PTHR24220:SF546 9 231 7.1E-231 T 22-04-2016 YE2892 5ea590cc2a283ad9e671bf7902061902 583 PANTHER PTHR24220:SF546 347 451 7.1E-231 T 22-04-2016 YE2892 5ea590cc2a283ad9e671bf7902061902 583 PANTHER PTHR24220:SF546 254 302 7.1E-231 T 22-04-2016 YE3954 37e36d44c83c843724e0fb5c21d11e08 135 PANTHER PTHR34352 1 135 9.3E-57 T 22-04-2016 YE3954 37e36d44c83c843724e0fb5c21d11e08 135 Gene3D G3DSA:2.20.25.10 1 34 1.1E-19 T 22-04-2016 YE3954 37e36d44c83c843724e0fb5c21d11e08 135 Gene3D G3DSA:3.30.300.20 35 132 2.2E-42 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta YE3954 37e36d44c83c843724e0fb5c21d11e08 135 Pfam PF02566 OsmC-like protein 30 127 3.2E-19 T 22-04-2016 IPR003718 OsmC/Ohr family YE3954 37e36d44c83c843724e0fb5c21d11e08 135 SUPERFAMILY SSF82784 1 132 3.66E-42 T 22-04-2016 IPR003718 OsmC/Ohr family YE2061 9281861e3823ddb37c78cadb9e4d482d 88 Pfam PF13710 ACT domain 7 67 3.7E-9 T 22-04-2016 YE2061 9281861e3823ddb37c78cadb9e4d482d 88 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 4 67 1.0E-14 T 22-04-2016 YE2061 9281861e3823ddb37c78cadb9e4d482d 88 PANTHER PTHR30239 1 80 4.1E-51 T 22-04-2016 YE2061 9281861e3823ddb37c78cadb9e4d482d 88 SUPERFAMILY SSF55021 2 70 1.94E-15 T 22-04-2016 YE2061 9281861e3823ddb37c78cadb9e4d482d 88 Gene3D G3DSA:3.30.70.260 2 71 2.3E-19 T 22-04-2016 YE2061 9281861e3823ddb37c78cadb9e4d482d 88 PANTHER PTHR30239:SF4 1 80 4.1E-51 T 22-04-2016 YE2474 b5b2c0175b4df31fdc07086bf6c1226e 318 Pfam PF03466 LysR substrate binding domain 90 289 1.7E-42 T 22-04-2016 IPR005119 LysR, substrate-binding YE2474 b5b2c0175b4df31fdc07086bf6c1226e 318 PANTHER PTHR30126 1 309 1.3E-152 T 22-04-2016 YE2474 b5b2c0175b4df31fdc07086bf6c1226e 318 Gene3D G3DSA:1.10.10.10 1 82 3.7E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2474 b5b2c0175b4df31fdc07086bf6c1226e 318 SUPERFAMILY SSF53850 91 294 2.1E-42 T 22-04-2016 YE2474 b5b2c0175b4df31fdc07086bf6c1226e 318 SUPERFAMILY SSF46785 4 113 7.5E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2474 b5b2c0175b4df31fdc07086bf6c1226e 318 PANTHER PTHR30126:SF6 1 309 1.3E-152 T 22-04-2016 YE2474 b5b2c0175b4df31fdc07086bf6c1226e 318 Gene3D G3DSA:3.40.190.10 91 179 2.2E-23 T 22-04-2016 YE2474 b5b2c0175b4df31fdc07086bf6c1226e 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.5E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE2474 b5b2c0175b4df31fdc07086bf6c1226e 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.5E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE2474 b5b2c0175b4df31fdc07086bf6c1226e 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.5E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE2474 b5b2c0175b4df31fdc07086bf6c1226e 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 63 1.5E-12 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE2474 b5b2c0175b4df31fdc07086bf6c1226e 318 Gene3D G3DSA:3.40.190.10 180 260 1.8E-26 T 22-04-2016 YE1187 5e4b56f802fad0a249c93644198642e3 301 PANTHER PTHR30521:SF0 1 301 2.8E-130 T 22-04-2016 YE1187 5e4b56f802fad0a249c93644198642e3 301 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 298 4.0E-86 T 22-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- YE1187 5e4b56f802fad0a249c93644198642e3 301 SUPERFAMILY SSF54909 1 299 3.04E-92 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel YE1187 5e4b56f802fad0a249c93644198642e3 301 Pfam PF04261 Dyp-type peroxidase family 5 297 3.1E-92 T 22-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- YE1187 5e4b56f802fad0a249c93644198642e3 301 PANTHER PTHR30521 1 301 2.8E-130 T 22-04-2016 YE0951 a3146419f9bca7692336c5cdbe6c0346 100 SUPERFAMILY SSF54111 1 99 7.19E-41 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YE0951 a3146419f9bca7692336c5cdbe6c0346 100 PANTHER PTHR33569 2 99 3.9E-39 T 22-04-2016 YE0951 a3146419f9bca7692336c5cdbe6c0346 100 Pfam PF00547 Urease, gamma subunit 1 99 2.4E-42 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YE0951 a3146419f9bca7692336c5cdbe6c0346 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 1.0E-46 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YE0951 a3146419f9bca7692336c5cdbe6c0346 100 PANTHER PTHR33569:SF1 2 99 3.9E-39 T 22-04-2016 YE0951 a3146419f9bca7692336c5cdbe6c0346 100 Gene3D G3DSA:3.30.280.10 1 100 6.6E-43 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YE0951 a3146419f9bca7692336c5cdbe6c0346 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 32.942 T 22-04-2016 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YE0951 a3146419f9bca7692336c5cdbe6c0346 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 100 2.9E-43 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YE0951 a3146419f9bca7692336c5cdbe6c0346 100 PIRSF PIRSF001223 1 100 3.2E-48 T 22-04-2016 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 YE1965 7debda3f44bef10d8b5298390e9c9b71 196 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 1 196 48.033 T 22-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 YE1965 7debda3f44bef10d8b5298390e9c9b71 196 Pfam PF00925 GTP cyclohydrolase II 4 170 4.3E-67 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 YE1965 7debda3f44bef10d8b5298390e9c9b71 196 SUPERFAMILY SSF142695 3 173 1.15E-65 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 YE1965 7debda3f44bef10d8b5298390e9c9b71 196 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 5 194 3.4E-91 T 22-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 YE1965 7debda3f44bef10d8b5298390e9c9b71 196 PANTHER PTHR21327 1 196 1.9E-144 T 22-04-2016 YE1965 7debda3f44bef10d8b5298390e9c9b71 196 PANTHER PTHR21327:SF14 1 196 1.9E-144 T 22-04-2016 YE2928 8c56721c5fcbb79e05fe86bb803afb75 353 Pfam PF02445 Quinolinate synthetase A protein 31 340 3.5E-102 T 22-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 YE2928 8c56721c5fcbb79e05fe86bb803afb75 353 PANTHER PTHR30573 1 352 7.0E-171 T 22-04-2016 YE2928 8c56721c5fcbb79e05fe86bb803afb75 353 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 347 70.769 T 22-04-2016 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 YE2928 8c56721c5fcbb79e05fe86bb803afb75 353 SUPERFAMILY SSF142754 29 341 5.36E-106 T 22-04-2016 YE2928 8c56721c5fcbb79e05fe86bb803afb75 353 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 29 341 6.8E-120 T 22-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 YE1326 30b8f78ef37fdf0a6cba50515d2fb8e7 182 PANTHER PTHR22769:SF25 1 182 4.3E-137 T 22-04-2016 YE1326 30b8f78ef37fdf0a6cba50515d2fb8e7 182 PANTHER PTHR22769 1 182 4.3E-137 T 22-04-2016 YE1326 30b8f78ef37fdf0a6cba50515d2fb8e7 182 SUPERFAMILY SSF55811 11 167 3.25E-33 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YE1326 30b8f78ef37fdf0a6cba50515d2fb8e7 182 Gene3D G3DSA:3.90.79.10 11 172 8.4E-61 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YE1326 30b8f78ef37fdf0a6cba50515d2fb8e7 182 Pfam PF00293 NUDIX domain 37 151 1.7E-17 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 YE1326 30b8f78ef37fdf0a6cba50515d2fb8e7 182 PIRSF PIRSF017340 2 171 3.4E-69 T 22-04-2016 IPR024195 NUDIX hydrolase, YfcD, predicted GO:0016817 YE2973 98ec5e485d0189256090db08d9afe815 148 Pfam PF01475 Ferric uptake regulator family 11 130 1.1E-46 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 YE2973 98ec5e485d0189256090db08d9afe815 148 SUPERFAMILY SSF46785 5 134 5.19E-44 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2973 98ec5e485d0189256090db08d9afe815 148 PANTHER PTHR33202 1 146 6.3E-46 T 22-04-2016 YE2973 98ec5e485d0189256090db08d9afe815 148 Gene3D G3DSA:1.10.10.10 2 82 1.4E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2991 deffa753c803ee2b88980705640793b4 304 Gene3D G3DSA:3.40.190.10 40 128 8.1E-28 T 22-04-2016 YE2991 deffa753c803ee2b88980705640793b4 304 Gene3D G3DSA:3.40.190.10 236 278 8.1E-28 T 22-04-2016 YE2991 deffa753c803ee2b88980705640793b4 304 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 273 5.0E-46 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YE2991 deffa753c803ee2b88980705640793b4 304 PANTHER PTHR30085:SF2 10 302 4.4E-134 T 22-04-2016 YE2991 deffa753c803ee2b88980705640793b4 304 SUPERFAMILY SSF53850 3 276 1.61E-61 T 22-04-2016 YE2991 deffa753c803ee2b88980705640793b4 304 Gene3D G3DSA:3.40.190.10 129 235 3.9E-30 T 22-04-2016 YE2991 deffa753c803ee2b88980705640793b4 304 PANTHER PTHR30085 10 302 4.4E-134 T 22-04-2016 YE2991 deffa753c803ee2b88980705640793b4 304 SMART SM00062 43 275 1.6E-64 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YE2488 8db162fe7e6c38550e4cadd911217e4a 310 SUPERFAMILY SSF53850 94 304 4.52E-44 T 22-04-2016 YE2488 8db162fe7e6c38550e4cadd911217e4a 310 Gene3D G3DSA:1.10.10.10 10 86 1.8E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2488 8db162fe7e6c38550e4cadd911217e4a 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 4.6E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE2488 8db162fe7e6c38550e4cadd911217e4a 310 PANTHER PTHR30537:SF5 2 306 2.0E-112 T 22-04-2016 YE2488 8db162fe7e6c38550e4cadd911217e4a 310 PANTHER PTHR30537 2 306 2.0E-112 T 22-04-2016 YE2488 8db162fe7e6c38550e4cadd911217e4a 310 Gene3D G3DSA:3.40.190.10 182 266 2.0E-21 T 22-04-2016 YE2488 8db162fe7e6c38550e4cadd911217e4a 310 Pfam PF03466 LysR substrate binding domain 93 300 5.0E-43 T 22-04-2016 IPR005119 LysR, substrate-binding YE2488 8db162fe7e6c38550e4cadd911217e4a 310 Gene3D G3DSA:3.40.190.10 99 181 6.1E-23 T 22-04-2016 YE2488 8db162fe7e6c38550e4cadd911217e4a 310 SUPERFAMILY SSF46785 11 94 2.01E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0631 60c1ae1c1ea1a264815571d8c2e72919 331 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 7 325 3.8E-129 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 YE0631 60c1ae1c1ea1a264815571d8c2e72919 331 PANTHER PTHR30004 2 331 2.3E-229 T 22-04-2016 YE0631 60c1ae1c1ea1a264815571d8c2e72919 331 SUPERFAMILY SSF53659 7 328 5.44E-114 T 22-04-2016 YE0631 60c1ae1c1ea1a264815571d8c2e72919 331 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 4 326 35.607 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 YE0631 60c1ae1c1ea1a264815571d8c2e72919 331 PANTHER PTHR30004:SF5 2 331 2.3E-229 T 22-04-2016 YE0631 60c1ae1c1ea1a264815571d8c2e72919 331 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 35 322 1.5E-107 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 YE0631 60c1ae1c1ea1a264815571d8c2e72919 331 Gene3D G3DSA:3.40.718.10 2 329 1.2E-135 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 YE2734 bef30502b6a1a66c476df41f8d982f20 113 SUPERFAMILY SSF52968 2 113 1.14E-37 T 22-04-2016 IPR010254 B12-dependent dehydratases, beta subunit YE2734 bef30502b6a1a66c476df41f8d982f20 113 Pfam PF02288 Dehydratase medium subunit 7 113 4.1E-34 T 22-04-2016 IPR003208 Diol/glycerol dehydratase/dehydratase reactivating factor YE2734 bef30502b6a1a66c476df41f8d982f20 113 Gene3D G3DSA:3.40.50.10150 5 113 1.1E-39 T 22-04-2016 IPR010254 B12-dependent dehydratases, beta subunit YE2734 bef30502b6a1a66c476df41f8d982f20 113 PIRSF PIRSF011503 1 113 4.9E-39 T 22-04-2016 IPR009192 Diol/glycerol dehydratase reactivating factor, small subunit YE4189 187e5c4b3f59a02b723c9ed196ed718b 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 97 110 3.7E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YE4189 187e5c4b3f59a02b723c9ed196ed718b 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 3.7E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YE4189 187e5c4b3f59a02b723c9ed196ed718b 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 129 145 3.7E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YE4189 187e5c4b3f59a02b723c9ed196ed718b 222 Gene3D G3DSA:3.40.50.1000 3 19 1.2E-32 T 22-04-2016 IPR023214 HAD-like domain YE4189 187e5c4b3f59a02b723c9ed196ed718b 222 Gene3D G3DSA:3.40.50.1000 88 214 1.2E-32 T 22-04-2016 IPR023214 HAD-like domain YE4189 187e5c4b3f59a02b723c9ed196ed718b 222 PANTHER PTHR18901:SF2 2 220 2.7E-61 T 22-04-2016 YE4189 187e5c4b3f59a02b723c9ed196ed718b 222 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 56 183 1.5E-13 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YE4189 187e5c4b3f59a02b723c9ed196ed718b 222 Gene3D G3DSA:1.10.150.240 20 81 4.3E-5 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 YE4189 187e5c4b3f59a02b723c9ed196ed718b 222 PANTHER PTHR18901 2 220 2.7E-61 T 22-04-2016 YE4189 187e5c4b3f59a02b723c9ed196ed718b 222 SUPERFAMILY SSF56784 4 212 1.23E-46 T 22-04-2016 IPR023214 HAD-like domain YE4189 187e5c4b3f59a02b723c9ed196ed718b 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 182 2.1E-26 T 22-04-2016 IPR023214 HAD-like domain YE3181 ba6e358b5bbf5b3cd1be2971fa288182 438 SMART SM00388 203 269 9.6E-22 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE3181 ba6e358b5bbf5b3cd1be2971fa288182 438 Pfam PF00989 PAS fold 99 194 2.1E-9 T 22-04-2016 IPR013767 PAS fold GO:0006355 YE3181 ba6e358b5bbf5b3cd1be2971fa288182 438 SMART SM00387 313 425 1.9E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE3181 ba6e358b5bbf5b3cd1be2971fa288182 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 8.1E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE3181 ba6e358b5bbf5b3cd1be2971fa288182 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 378 8.1E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE3181 ba6e358b5bbf5b3cd1be2971fa288182 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 364 8.1E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE3181 ba6e358b5bbf5b3cd1be2971fa288182 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 422 8.1E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE3181 ba6e358b5bbf5b3cd1be2971fa288182 438 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 98 211 8.5E-9 T 22-04-2016 IPR000014 PAS domain YE3181 ba6e358b5bbf5b3cd1be2971fa288182 438 PANTHER PTHR24423 1 428 6.9E-196 T 22-04-2016 YE3181 ba6e358b5bbf5b3cd1be2971fa288182 438 Pfam PF11808 Domain of unknown function (DUF3329) 6 91 3.6E-29 T 22-04-2016 IPR021766 Protein of unknown function DUF3329 GO:0004673 YE3181 ba6e358b5bbf5b3cd1be2971fa288182 438 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 313 423 1.4E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE3181 ba6e358b5bbf5b3cd1be2971fa288182 438 SUPERFAMILY SSF55874 259 423 1.15E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE3181 ba6e358b5bbf5b3cd1be2971fa288182 438 Gene3D G3DSA:1.10.287.130 195 254 1.7E-22 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE3181 ba6e358b5bbf5b3cd1be2971fa288182 438 Gene3D G3DSA:3.30.565.10 255 422 1.5E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE3181 ba6e358b5bbf5b3cd1be2971fa288182 438 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 96 420 3.7E-135 T 22-04-2016 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 YE3181 ba6e358b5bbf5b3cd1be2971fa288182 438 SMART SM00091 98 164 9.9E-8 T 22-04-2016 IPR000014 PAS domain YE3181 ba6e358b5bbf5b3cd1be2971fa288182 438 PANTHER PTHR24423:SF554 1 428 6.9E-196 T 22-04-2016 YE3181 ba6e358b5bbf5b3cd1be2971fa288182 438 SUPERFAMILY SSF47384 190 268 3.73E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE3181 ba6e358b5bbf5b3cd1be2971fa288182 438 Pfam PF00512 His Kinase A (phospho-acceptor) domain 203 268 3.4E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE3181 ba6e358b5bbf5b3cd1be2971fa288182 438 Gene3D G3DSA:3.30.450.20 99 194 2.2E-10 T 22-04-2016 YE3181 ba6e358b5bbf5b3cd1be2971fa288182 438 SUPERFAMILY SSF55785 87 195 1.4E-12 T 22-04-2016 IPR000014 PAS domain YE3387 b6c973e1144aa664c4ead490acf368a2 330 SUPERFAMILY SSF101790 245 326 5.69E-26 T 22-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain YE3387 b6c973e1144aa664c4ead490acf368a2 330 Hamap MF_01175 tRNA-modifying protein YgfZ [ygfZ]. 1 323 50.706 T 22-04-2016 IPR023758 tRNA-modifying protein YgfZ GO:0005542|GO:0009451 YE3387 b6c973e1144aa664c4ead490acf368a2 330 PANTHER PTHR22602 15 319 5.9E-78 T 22-04-2016 YE3387 b6c973e1144aa664c4ead490acf368a2 330 PANTHER PTHR22602:SF0 15 319 5.9E-78 T 22-04-2016 YE3387 b6c973e1144aa664c4ead490acf368a2 330 Gene3D G3DSA:3.30.70.1400 28 112 3.1E-31 T 22-04-2016 YE3387 b6c973e1144aa664c4ead490acf368a2 330 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 188 253 2.2E-26 T 22-04-2016 IPR017703 YgfZ/GcvT conserved site YE3387 b6c973e1144aa664c4ead490acf368a2 330 SUPERFAMILY SSF103025 19 243 1.11E-65 T 22-04-2016 YE3387 b6c973e1144aa664c4ead490acf368a2 330 Pfam PF01571 Aminomethyltransferase folate-binding domain 32 216 8.2E-9 T 22-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal YE1035 ebf0841bc5d36958ddc2b9168487ff12 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 433 9.9E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE1035 ebf0841bc5d36958ddc2b9168487ff12 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 419 9.9E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE1035 ebf0841bc5d36958ddc2b9168487ff12 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 458 9.9E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE1035 ebf0841bc5d36958ddc2b9168487ff12 483 Gene3D G3DSA:3.30.565.10 329 481 3.2E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE1035 ebf0841bc5d36958ddc2b9168487ff12 483 Pfam PF00512 His Kinase A (phospho-acceptor) domain 258 321 9.0E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE1035 ebf0841bc5d36958ddc2b9168487ff12 483 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 369 479 2.0E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE1035 ebf0841bc5d36958ddc2b9168487ff12 483 Pfam PF00672 HAMP domain 184 251 5.3E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YE1035 ebf0841bc5d36958ddc2b9168487ff12 483 SUPERFAMILY SSF55874 329 478 2.1E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE1035 ebf0841bc5d36958ddc2b9168487ff12 483 SMART SM00387 368 480 9.6E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE1035 ebf0841bc5d36958ddc2b9168487ff12 483 SMART SM00388 257 325 8.3E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE1035 ebf0841bc5d36958ddc2b9168487ff12 483 PANTHER PTHR24423:SF473 197 483 2.6E-219 T 22-04-2016 YE1035 ebf0841bc5d36958ddc2b9168487ff12 483 PANTHER PTHR24423:SF473 1 19 2.6E-219 T 22-04-2016 YE1035 ebf0841bc5d36958ddc2b9168487ff12 483 PANTHER PTHR24423 197 483 2.6E-219 T 22-04-2016 YE1035 ebf0841bc5d36958ddc2b9168487ff12 483 PANTHER PTHR24423 1 19 2.6E-219 T 22-04-2016 YE1035 ebf0841bc5d36958ddc2b9168487ff12 483 SUPERFAMILY SSF47384 240 321 1.37E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE1035 ebf0841bc5d36958ddc2b9168487ff12 483 Gene3D G3DSA:1.10.287.130 249 321 5.9E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE3139 fbccc721855a7e55afd9a26127b7cd4d 492 Gene3D G3DSA:1.20.1250.20 12 198 3.4E-19 T 22-04-2016 YE3139 fbccc721855a7e55afd9a26127b7cd4d 492 Gene3D G3DSA:1.20.1250.20 221 404 8.8E-12 T 22-04-2016 YE3139 fbccc721855a7e55afd9a26127b7cd4d 492 PANTHER PTHR12778 3 404 5.7E-126 T 22-04-2016 YE3139 fbccc721855a7e55afd9a26127b7cd4d 492 Pfam PF07690 Major Facilitator Superfamily 17 366 2.0E-32 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YE3139 fbccc721855a7e55afd9a26127b7cd4d 492 SUPERFAMILY SSF103473 6 404 2.88E-45 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE3139 fbccc721855a7e55afd9a26127b7cd4d 492 TIGRFAM TIGR00901 2A0125: AmpG-like permease 25 363 4.6E-118 T 22-04-2016 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 GO:0016020 YE0919 903cd27ae89a6507e79dc2abf18374e6 251 PANTHER PTHR11935 1 251 5.9E-97 T 22-04-2016 YE0919 903cd27ae89a6507e79dc2abf18374e6 251 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 251 4.1E-103 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 YE0919 903cd27ae89a6507e79dc2abf18374e6 251 PANTHER PTHR11935:SF7 1 251 5.9E-97 T 22-04-2016 YE0919 903cd27ae89a6507e79dc2abf18374e6 251 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 166 251 1.5E-22 T 22-04-2016 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 YE0919 903cd27ae89a6507e79dc2abf18374e6 251 Gene3D G3DSA:3.60.15.10 4 251 2.5E-81 T 22-04-2016 IPR001279 Metallo-beta-lactamase YE0919 903cd27ae89a6507e79dc2abf18374e6 251 SMART SM00849 11 165 1.6E-38 T 22-04-2016 IPR001279 Metallo-beta-lactamase YE0919 903cd27ae89a6507e79dc2abf18374e6 251 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 1 251 44.906 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 YE0919 903cd27ae89a6507e79dc2abf18374e6 251 Pfam PF00753 Metallo-beta-lactamase superfamily 13 165 1.4E-16 T 22-04-2016 IPR001279 Metallo-beta-lactamase YE0919 903cd27ae89a6507e79dc2abf18374e6 251 PIRSF PIRSF005457 1 251 6.6E-88 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 YE0919 903cd27ae89a6507e79dc2abf18374e6 251 SUPERFAMILY SSF56281 1 251 1.57E-67 T 22-04-2016 IPR001279 Metallo-beta-lactamase YE3944 bc3ff1a961cae7df9bf5928e5a3e0fae 325 SUPERFAMILY SSF53756 2 323 1.99E-58 T 22-04-2016 YE3944 bc3ff1a961cae7df9bf5928e5a3e0fae 325 Gene3D G3DSA:3.40.50.2000 2 103 1.3E-28 T 22-04-2016 YE3944 bc3ff1a961cae7df9bf5928e5a3e0fae 325 Gene3D G3DSA:3.40.50.2000 169 324 2.5E-25 T 22-04-2016 YE3944 bc3ff1a961cae7df9bf5928e5a3e0fae 325 PANTHER PTHR30160:SF7 1 311 1.6E-44 T 22-04-2016 YE3944 bc3ff1a961cae7df9bf5928e5a3e0fae 325 PANTHER PTHR30160 1 311 1.6E-44 T 22-04-2016 YE3944 bc3ff1a961cae7df9bf5928e5a3e0fae 325 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 80 298 6.3E-13 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 YE2833 7d18409667444042494900759a02f29e 312 PANTHER PTHR11562 12 311 6.2E-41 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 YE2833 7d18409667444042494900759a02f29e 312 Gene3D G3DSA:1.20.1510.10 19 221 1.7E-27 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain YE2833 7d18409667444042494900759a02f29e 312 SUPERFAMILY SSF161111 16 223 4.18E-35 T 22-04-2016 YE2833 7d18409667444042494900759a02f29e 312 PANTHER PTHR11562:SF17 12 311 6.2E-41 T 22-04-2016 YE2833 7d18409667444042494900759a02f29e 312 Pfam PF01545 Cation efflux family 22 221 1.3E-35 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 YE1396 028fc4548b2fdc83b258fab7b94b612b 955 Gene3D G3DSA:3.40.50.2300 831 950 1.6E-39 T 22-04-2016 YE1396 028fc4548b2fdc83b258fab7b94b612b 955 Pfam PF00072 Response regulator receiver domain 835 944 2.8E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE1396 028fc4548b2fdc83b258fab7b94b612b 955 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 583 692 3.4E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE1396 028fc4548b2fdc83b258fab7b94b612b 955 SUPERFAMILY SSF52172 709 823 6.96E-39 T 22-04-2016 IPR011006 CheY-like superfamily YE1396 028fc4548b2fdc83b258fab7b94b612b 955 Pfam PF00512 His Kinase A (phospho-acceptor) domain 471 535 5.5E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE1396 028fc4548b2fdc83b258fab7b94b612b 955 SMART SM00448 833 944 2.8E-37 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE1396 028fc4548b2fdc83b258fab7b94b612b 955 SMART SM00387 583 694 5.5E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE1396 028fc4548b2fdc83b258fab7b94b612b 955 PANTHER PTHR24423:SF382 41 83 3.0E-255 T 22-04-2016 YE1396 028fc4548b2fdc83b258fab7b94b612b 955 Gene3D G3DSA:1.10.287.130 475 522 3.0E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE1396 028fc4548b2fdc83b258fab7b94b612b 955 SUPERFAMILY SSF55874 525 694 2.23E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE1396 028fc4548b2fdc83b258fab7b94b612b 955 Hamap MF_00979 Sensor histidine kinase RcsC [rcsC]. 24 949 27.653 T 22-04-2016 IPR030856 Sensor histidine kinase RcsC GO:0000155|GO:0000160|GO:0016021|GO:0042710 YE1396 028fc4548b2fdc83b258fab7b94b612b 955 PANTHER PTHR24423:SF382 357 697 3.0E-255 T 22-04-2016 YE1396 028fc4548b2fdc83b258fab7b94b612b 955 PANTHER PTHR24423 357 697 3.0E-255 T 22-04-2016 YE1396 028fc4548b2fdc83b258fab7b94b612b 955 SUPERFAMILY SSF47384 455 537 3.14E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE1396 028fc4548b2fdc83b258fab7b94b612b 955 PANTHER PTHR24423 760 955 3.0E-255 T 22-04-2016 YE1396 028fc4548b2fdc83b258fab7b94b612b 955 SMART SM00388 471 536 1.6E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE1396 028fc4548b2fdc83b258fab7b94b612b 955 PANTHER PTHR24423 41 83 3.0E-255 T 22-04-2016 YE1396 028fc4548b2fdc83b258fab7b94b612b 955 PANTHER PTHR24423:SF382 760 955 3.0E-255 T 22-04-2016 YE1396 028fc4548b2fdc83b258fab7b94b612b 955 Gene3D G3DSA:3.30.450.20 429 474 6.1E-6 T 22-04-2016 YE1396 028fc4548b2fdc83b258fab7b94b612b 955 SUPERFAMILY SSF52172 833 951 8.54E-39 T 22-04-2016 IPR011006 CheY-like superfamily YE1396 028fc4548b2fdc83b258fab7b94b612b 955 Pfam PF09456 RcsC Alpha-Beta-Loop (ABL) 717 806 1.5E-31 T 22-04-2016 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal GO:0000160|GO:0004673|GO:0004871|GO:0005524|GO:0005886|GO:0006355|GO:0016021|GO:0018106 YE1396 028fc4548b2fdc83b258fab7b94b612b 955 Gene3D G3DSA:3.30.565.10 523 692 4.6E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE1396 028fc4548b2fdc83b258fab7b94b612b 955 PRINTS PR00344 Bacterial sensor protein C-terminal signature 637 647 8.1E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE1396 028fc4548b2fdc83b258fab7b94b612b 955 PRINTS PR00344 Bacterial sensor protein C-terminal signature 654 672 8.1E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE1396 028fc4548b2fdc83b258fab7b94b612b 955 PRINTS PR00344 Bacterial sensor protein C-terminal signature 619 633 8.1E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE1396 028fc4548b2fdc83b258fab7b94b612b 955 PRINTS PR00344 Bacterial sensor protein C-terminal signature 678 691 8.1E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE0051 2be2313808f684cd30d45f897d9a2186 394 PANTHER PTHR10590 3 394 2.7E-220 T 22-04-2016 IPR008276 Concentrative nucleoside transporter GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 YE0051 2be2313808f684cd30d45f897d9a2186 394 PANTHER PTHR10590:SF13 3 394 2.7E-220 T 22-04-2016 YE0051 2be2313808f684cd30d45f897d9a2186 394 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 10 82 1.4E-16 T 22-04-2016 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 YE0051 2be2313808f684cd30d45f897d9a2186 394 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 193 392 9.4E-56 T 22-04-2016 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 YE2290 c54e069f8238369200b70b5bd02c45fc 108 Pfam PF07377 Protein of unknown function (DUF1493) 1 108 3.0E-43 T 22-04-2016 IPR010862 Protein of unknown function DUF1493 YE2797 479f7e920420e317b1ff486314956697 115 PANTHER PTHR34535:SF1 2 115 2.6E-51 T 22-04-2016 YE2797 479f7e920420e317b1ff486314956697 115 PIRSF PIRSF004761 1 115 1.3E-31 T 22-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 YE2797 479f7e920420e317b1ff486314956697 115 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 115 4.0E-35 T 22-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 YE2797 479f7e920420e317b1ff486314956697 115 ProSitePatterns PS01249 Hydrogenases expression/synthesis hypA family signature. 34 76 - T 22-04-2016 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site YE2797 479f7e920420e317b1ff486314956697 115 Hamap MF_00213 Probable hydrogenase nickel incorporation protein HypA [hypA]. 1 115 21.442 T 22-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 YE2797 479f7e920420e317b1ff486314956697 115 PANTHER PTHR34535 2 115 2.6E-51 T 22-04-2016 YE2797 479f7e920420e317b1ff486314956697 115 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 114 7.8E-28 T 22-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 YE3810 3257000510cbd9ac4e6af34a10d84bae 150 Pfam PF01220 Dehydroquinase class II 7 142 3.6E-59 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 YE3810 3257000510cbd9ac4e6af34a10d84bae 150 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 150 74.569 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 YE3810 3257000510cbd9ac4e6af34a10d84bae 150 Gene3D G3DSA:3.40.50.9100 5 147 4.4E-67 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 YE3810 3257000510cbd9ac4e6af34a10d84bae 150 SUPERFAMILY SSF52304 6 148 1.07E-61 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 YE3810 3257000510cbd9ac4e6af34a10d84bae 150 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 22-04-2016 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 YE3810 3257000510cbd9ac4e6af34a10d84bae 150 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 21 150 6.0E-69 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 YE3810 3257000510cbd9ac4e6af34a10d84bae 150 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 145 1.6E-61 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 YE3810 3257000510cbd9ac4e6af34a10d84bae 150 PANTHER PTHR21272 2 150 2.2E-90 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 YE3810 3257000510cbd9ac4e6af34a10d84bae 150 PIRSF PIRSF001399 3 149 8.2E-59 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 YE2851 a0716a678be139d46e0514d47af875cf 86 Pfam PF07338 Protein of unknown function (DUF1471) 34 86 4.3E-18 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 YE2851 a0716a678be139d46e0514d47af875cf 86 PANTHER PTHR34156 2 85 9.5E-48 T 22-04-2016 YE2851 a0716a678be139d46e0514d47af875cf 86 SUPERFAMILY SSF159871 3 86 5.36E-26 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 YE2851 a0716a678be139d46e0514d47af875cf 86 Gene3D G3DSA:3.30.1660.10 18 85 1.2E-26 T 22-04-2016 IPR025543 Dodecin-like YE2851 a0716a678be139d46e0514d47af875cf 86 PANTHER PTHR34156:SF1 2 85 9.5E-48 T 22-04-2016 YE3708 5f0e975946a5f1a3e858c30e81456868 469 SUPERFAMILY SSF51556 3 465 1.87E-180 T 22-04-2016 IPR032466 Metal-dependent hydrolase YE3708 5f0e975946a5f1a3e858c30e81456868 469 PANTHER PTHR30068 2 469 0.0 T 22-04-2016 YE3708 5f0e975946a5f1a3e858c30e81456868 469 Gene3D G3DSA:1.10.2020.10 46 137 1.6E-42 T 22-04-2016 IPR023177 Uronate isomerase, domain 2 GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248|UniPathway: UPA00246 YE3708 5f0e975946a5f1a3e858c30e81456868 469 Pfam PF02614 Glucuronate isomerase 1 465 2.5E-227 T 22-04-2016 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248|UniPathway: UPA00246 YE3708 5f0e975946a5f1a3e858c30e81456868 469 Hamap MF_00675 Uronate isomerase [uxaC]. 2 467 49.438 T 22-04-2016 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248|UniPathway: UPA00246 YE3708 5f0e975946a5f1a3e858c30e81456868 469 Gene3D G3DSA:3.20.20.140 139 466 5.8E-163 T 22-04-2016 YE3708 5f0e975946a5f1a3e858c30e81456868 469 Gene3D G3DSA:3.20.20.140 3 44 5.8E-163 T 22-04-2016 YE3708 5f0e975946a5f1a3e858c30e81456868 469 PANTHER PTHR30068:SF4 2 469 0.0 T 22-04-2016 YE1279 974e2630e2e9548c3ade83f8db4920a9 176 PANTHER PTHR35562 1 176 1.7E-116 T 22-04-2016 YE1279 974e2630e2e9548c3ade83f8db4920a9 176 SUPERFAMILY SSF160443 96 171 2.09E-10 T 22-04-2016 IPR002625 Smr domain YE1279 974e2630e2e9548c3ade83f8db4920a9 176 SMART SM00463 95 173 9.7E-20 T 22-04-2016 IPR002625 Smr domain YE1279 974e2630e2e9548c3ade83f8db4920a9 176 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 174 40.215 T 22-04-2016 IPR022990 Uncharacterised protein family UPF0115 YE1279 974e2630e2e9548c3ade83f8db4920a9 176 PANTHER PTHR35562:SF1 1 176 1.7E-116 T 22-04-2016 YE1279 974e2630e2e9548c3ade83f8db4920a9 176 Pfam PF01713 Smr domain 98 172 2.3E-19 T 22-04-2016 IPR002625 Smr domain YE3595 24b50dbaf86e909fc317598146edaf7b 1041 Gene3D G3DSA:3.30.70.1430 566 666 3.2E-30 T 22-04-2016 YE3595 24b50dbaf86e909fc317598146edaf7b 1041 SUPERFAMILY SSF82693 136 182 4.84E-23 T 22-04-2016 YE3595 24b50dbaf86e909fc317598146edaf7b 1041 SUPERFAMILY SSF82693 275 331 4.84E-23 T 22-04-2016 YE3595 24b50dbaf86e909fc317598146edaf7b 1041 Gene3D G3DSA:3.30.70.1430 38 137 3.8E-32 T 22-04-2016 YE3595 24b50dbaf86e909fc317598146edaf7b 1041 Pfam PF00873 AcrB/AcrD/AcrF family 1 1021 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE3595 24b50dbaf86e909fc317598146edaf7b 1041 Gene3D G3DSA:3.30.2090.10 717 800 1.3E-14 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YE3595 24b50dbaf86e909fc317598146edaf7b 1041 Gene3D G3DSA:3.30.2090.10 182 276 9.8E-29 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YE3595 24b50dbaf86e909fc317598146edaf7b 1041 PANTHER PTHR32063:SF27 1 1036 0.0 T 22-04-2016 YE3595 24b50dbaf86e909fc317598146edaf7b 1041 PANTHER PTHR32063 1 1036 0.0 T 22-04-2016 YE3595 24b50dbaf86e909fc317598146edaf7b 1041 Gene3D G3DSA:1.10.3850.10 808 1023 5.1E-57 T 22-04-2016 YE3595 24b50dbaf86e909fc317598146edaf7b 1041 SUPERFAMILY SSF82866 297 499 5.1E-44 T 22-04-2016 YE3595 24b50dbaf86e909fc317598146edaf7b 1041 SUPERFAMILY SSF82693 564 666 5.23E-28 T 22-04-2016 YE3595 24b50dbaf86e909fc317598146edaf7b 1041 SUPERFAMILY SSF82714 717 803 5.75E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YE3595 24b50dbaf86e909fc317598146edaf7b 1041 SUPERFAMILY SSF82866 826 1021 7.72E-45 T 22-04-2016 YE3595 24b50dbaf86e909fc317598146edaf7b 1041 SUPERFAMILY SSF82693 38 131 2.88E-26 T 22-04-2016 YE3595 24b50dbaf86e909fc317598146edaf7b 1041 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 1.3E-85 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE3595 24b50dbaf86e909fc317598146edaf7b 1041 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 1.3E-85 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE3595 24b50dbaf86e909fc317598146edaf7b 1041 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 1.3E-85 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE3595 24b50dbaf86e909fc317598146edaf7b 1041 PRINTS PR00702 Acriflavin resistance protein family signature 551 568 1.3E-85 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE3595 24b50dbaf86e909fc317598146edaf7b 1041 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 1.3E-85 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE3595 24b50dbaf86e909fc317598146edaf7b 1041 PRINTS PR00702 Acriflavin resistance protein family signature 620 634 1.3E-85 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE3595 24b50dbaf86e909fc317598146edaf7b 1041 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.3E-85 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE3595 24b50dbaf86e909fc317598146edaf7b 1041 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 1.3E-85 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE3595 24b50dbaf86e909fc317598146edaf7b 1041 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 1.3E-85 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE3595 24b50dbaf86e909fc317598146edaf7b 1041 SUPERFAMILY SSF82714 183 273 1.83E-22 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YE3595 24b50dbaf86e909fc317598146edaf7b 1041 SUPERFAMILY SSF82693 667 716 3.66E-24 T 22-04-2016 YE3595 24b50dbaf86e909fc317598146edaf7b 1041 SUPERFAMILY SSF82693 803 852 3.66E-24 T 22-04-2016 YE3595 24b50dbaf86e909fc317598146edaf7b 1041 Gene3D G3DSA:1.20.1640.10 292 500 1.4E-53 T 22-04-2016 YE3595 24b50dbaf86e909fc317598146edaf7b 1041 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1037 0.0 T 22-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 YE3797 fe666d25cfb8d245a1ffbced8f7036d5 303 PANTHER PTHR30126 1 303 2.4E-165 T 22-04-2016 YE3797 fe666d25cfb8d245a1ffbced8f7036d5 303 SUPERFAMILY SSF53850 90 295 7.76E-42 T 22-04-2016 YE3797 fe666d25cfb8d245a1ffbced8f7036d5 303 Gene3D G3DSA:1.10.10.10 3 87 5.8E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3797 fe666d25cfb8d245a1ffbced8f7036d5 303 PANTHER PTHR30126:SF26 1 303 2.4E-165 T 22-04-2016 YE3797 fe666d25cfb8d245a1ffbced8f7036d5 303 Pfam PF03466 LysR substrate binding domain 89 292 1.1E-40 T 22-04-2016 IPR005119 LysR, substrate-binding YE3797 fe666d25cfb8d245a1ffbced8f7036d5 303 Gene3D G3DSA:3.40.190.10 174 256 4.1E-17 T 22-04-2016 YE3797 fe666d25cfb8d245a1ffbced8f7036d5 303 Gene3D G3DSA:3.40.190.10 89 173 1.3E-9 T 22-04-2016 YE3797 fe666d25cfb8d245a1ffbced8f7036d5 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 3.5E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE3797 fe666d25cfb8d245a1ffbced8f7036d5 303 SUPERFAMILY SSF46785 4 109 1.49E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0032 d0c87f3137a061415ca3427c833ec2ec 145 Gene3D G3DSA:3.50.80.10 1 144 8.3E-57 T 22-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain YE0032 d0c87f3137a061415ca3427c833ec2ec 145 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 34.791 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 YE0032 d0c87f3137a061415ca3427c833ec2ec 145 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 144 2.6E-68 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 YE0032 d0c87f3137a061415ca3427c833ec2ec 145 PANTHER PTHR10472 2 144 7.0E-75 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 YE0032 d0c87f3137a061415ca3427c833ec2ec 145 SUPERFAMILY SSF69500 1 144 1.09E-56 T 22-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain YE0032 d0c87f3137a061415ca3427c833ec2ec 145 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 143 6.6E-52 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 YE0014 a5618dd2b3b9a6f6d7387ab51fcb091f 229 SMART SM00345 18 77 9.3E-19 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YE0014 a5618dd2b3b9a6f6d7387ab51fcb091f 229 SMART SM00895 106 227 2.7E-16 T 22-04-2016 IPR011711 GntR, C-terminal YE0014 a5618dd2b3b9a6f6d7387ab51fcb091f 229 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 77 4.0E-18 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YE0014 a5618dd2b3b9a6f6d7387ab51fcb091f 229 SUPERFAMILY SSF48008 107 222 3.4E-21 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal YE0014 a5618dd2b3b9a6f6d7387ab51fcb091f 229 Gene3D G3DSA:1.10.10.10 9 87 5.5E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0014 a5618dd2b3b9a6f6d7387ab51fcb091f 229 PANTHER PTHR11751:SF408 104 122 5.3E-50 T 22-04-2016 YE0014 a5618dd2b3b9a6f6d7387ab51fcb091f 229 PANTHER PTHR11751:SF408 18 84 5.3E-50 T 22-04-2016 YE0014 a5618dd2b3b9a6f6d7387ab51fcb091f 229 PANTHER PTHR11751 104 122 5.3E-50 T 22-04-2016 YE0014 a5618dd2b3b9a6f6d7387ab51fcb091f 229 PANTHER PTHR11751 18 84 5.3E-50 T 22-04-2016 YE0014 a5618dd2b3b9a6f6d7387ab51fcb091f 229 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 1.6E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YE0014 a5618dd2b3b9a6f6d7387ab51fcb091f 229 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 1.6E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YE0014 a5618dd2b3b9a6f6d7387ab51fcb091f 229 Gene3D G3DSA:1.20.120.530 106 222 1.8E-18 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal YE0014 a5618dd2b3b9a6f6d7387ab51fcb091f 229 Pfam PF07729 FCD domain 110 221 4.2E-21 T 22-04-2016 IPR011711 GntR, C-terminal YE0014 a5618dd2b3b9a6f6d7387ab51fcb091f 229 SUPERFAMILY SSF46785 10 81 1.07E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3125 de3dac1091acc8e3d739f6c54e24b59b 273 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 22-04-2016 IPR000150 Cof protein GO:0016787 YE3125 de3dac1091acc8e3d739f6c54e24b59b 273 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 229 1.2E-33 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 YE3125 de3dac1091acc8e3d739f6c54e24b59b 273 Gene3D G3DSA:3.40.50.1000 1 72 1.6E-47 T 22-04-2016 IPR023214 HAD-like domain YE3125 de3dac1091acc8e3d739f6c54e24b59b 273 Gene3D G3DSA:3.40.50.1000 175 263 1.6E-47 T 22-04-2016 IPR023214 HAD-like domain YE3125 de3dac1091acc8e3d739f6c54e24b59b 273 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 258 1.5E-52 T 22-04-2016 IPR023214 HAD-like domain YE3125 de3dac1091acc8e3d739f6c54e24b59b 273 Hamap MF_01847 HMP-PP phosphatase [cof]. 1 273 63.95 T 22-04-2016 IPR023938 HMP-PP phosphatase GO:0016818 YE3125 de3dac1091acc8e3d739f6c54e24b59b 273 ProSitePatterns PS01229 Hypothetical cof family signature 2. 210 232 - T 22-04-2016 YE3125 de3dac1091acc8e3d739f6c54e24b59b 273 SUPERFAMILY SSF56784 1 262 7.5E-61 T 22-04-2016 IPR023214 HAD-like domain YE3125 de3dac1091acc8e3d739f6c54e24b59b 273 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 258 4.1E-53 T 22-04-2016 IPR000150 Cof protein GO:0016787 YE3125 de3dac1091acc8e3d739f6c54e24b59b 273 PANTHER PTHR10000:SF21 1 264 1.9E-173 T 22-04-2016 YE3125 de3dac1091acc8e3d739f6c54e24b59b 273 PANTHER PTHR10000 1 264 1.9E-173 T 22-04-2016 YE3125 de3dac1091acc8e3d739f6c54e24b59b 273 Gene3D G3DSA:3.30.1240.10 83 174 1.9E-13 T 22-04-2016 YE3597 5314237baecfc6f39e97c00f0d5fe130 832 PANTHER PTHR10799:SF657 4 77 2.5E-74 T 22-04-2016 YE3597 5314237baecfc6f39e97c00f0d5fe130 832 PANTHER PTHR10799 4 77 2.5E-74 T 22-04-2016 YE3597 5314237baecfc6f39e97c00f0d5fe130 832 SUPERFAMILY SSF141868 584 826 2.88E-87 T 22-04-2016 IPR001633 EAL domain YE3597 5314237baecfc6f39e97c00f0d5fe130 832 SMART SM00267 396 568 4.3E-66 T 22-04-2016 IPR000160 GGDEF domain YE3597 5314237baecfc6f39e97c00f0d5fe130 832 Pfam PF00989 PAS fold 284 393 3.4E-8 T 22-04-2016 IPR013767 PAS fold GO:0006355 YE3597 5314237baecfc6f39e97c00f0d5fe130 832 Gene3D G3DSA:3.20.20.450 581 826 6.4E-94 T 22-04-2016 IPR001633 EAL domain YE3597 5314237baecfc6f39e97c00f0d5fe130 832 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 403 565 3.9E-44 T 22-04-2016 IPR000160 GGDEF domain YE3597 5314237baecfc6f39e97c00f0d5fe130 832 Gene3D G3DSA:3.30.70.270 409 576 1.2E-57 T 22-04-2016 YE3597 5314237baecfc6f39e97c00f0d5fe130 832 SUPERFAMILY SSF55785 277 394 1.13E-18 T 22-04-2016 IPR000014 PAS domain YE3597 5314237baecfc6f39e97c00f0d5fe130 832 Gene3D G3DSA:3.30.450.20 276 394 8.9E-18 T 22-04-2016 YE3597 5314237baecfc6f39e97c00f0d5fe130 832 Pfam PF00563 EAL domain 586 815 2.4E-71 T 22-04-2016 IPR001633 EAL domain YE3597 5314237baecfc6f39e97c00f0d5fe130 832 PANTHER PTHR10799:SF657 440 678 2.5E-74 T 22-04-2016 YE3597 5314237baecfc6f39e97c00f0d5fe130 832 SMART SM00091 284 349 2.8E-7 T 22-04-2016 IPR000014 PAS domain YE3597 5314237baecfc6f39e97c00f0d5fe130 832 SMART SM00052 578 820 4.4E-111 T 22-04-2016 IPR001633 EAL domain YE3597 5314237baecfc6f39e97c00f0d5fe130 832 PANTHER PTHR10799 440 678 2.5E-74 T 22-04-2016 YE3597 5314237baecfc6f39e97c00f0d5fe130 832 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 282 402 3.4E-13 T 22-04-2016 IPR000014 PAS domain YE3597 5314237baecfc6f39e97c00f0d5fe130 832 SUPERFAMILY SSF55073 412 570 4.16E-50 T 22-04-2016 IPR029787 Nucleotide cyclase YE3597 5314237baecfc6f39e97c00f0d5fe130 832 Pfam PF05228 CHASE4 domain 44 203 2.4E-20 T 22-04-2016 IPR007892 CHASE4 YE3597 5314237baecfc6f39e97c00f0d5fe130 832 Pfam PF00990 Diguanylate cyclase, GGDEF domain 408 564 1.9E-49 T 22-04-2016 IPR000160 GGDEF domain YE3056 bc88295368c16d9b9c962a99d1d3d0e6 258 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 182 0.0011 T 22-04-2016 YE3056 bc88295368c16d9b9c962a99d1d3d0e6 258 Pfam PF00106 short chain dehydrogenase 3 191 1.2E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE3056 bc88295368c16d9b9c962a99d1d3d0e6 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 1.9E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE3056 bc88295368c16d9b9c962a99d1d3d0e6 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 1.9E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE3056 bc88295368c16d9b9c962a99d1d3d0e6 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 1.9E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE3056 bc88295368c16d9b9c962a99d1d3d0e6 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.9E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE3056 bc88295368c16d9b9c962a99d1d3d0e6 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 1.9E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE3056 bc88295368c16d9b9c962a99d1d3d0e6 258 PANTHER PTHR24322 146 178 7.6E-108 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE3056 bc88295368c16d9b9c962a99d1d3d0e6 258 PANTHER PTHR24322 7 130 7.6E-108 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE3056 bc88295368c16d9b9c962a99d1d3d0e6 258 PANTHER PTHR24322:SF463 146 178 7.6E-108 T 22-04-2016 YE3056 bc88295368c16d9b9c962a99d1d3d0e6 258 PANTHER PTHR24322:SF463 7 130 7.6E-108 T 22-04-2016 YE3056 bc88295368c16d9b9c962a99d1d3d0e6 258 SUPERFAMILY SSF51735 3 254 1.55E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3056 bc88295368c16d9b9c962a99d1d3d0e6 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YE3056 bc88295368c16d9b9c962a99d1d3d0e6 258 Gene3D G3DSA:3.40.50.720 2 234 1.0E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3056 bc88295368c16d9b9c962a99d1d3d0e6 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 4.2E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE3056 bc88295368c16d9b9c962a99d1d3d0e6 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 4.2E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE3056 bc88295368c16d9b9c962a99d1d3d0e6 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 4.2E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE1528 889cec898a5415bf21c2fd885674ed96 430 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 228 406 3.8E-35 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YE1528 889cec898a5415bf21c2fd885674ed96 430 Gene3D G3DSA:3.30.930.10 105 427 6.6E-142 T 22-04-2016 YE1528 889cec898a5415bf21c2fd885674ed96 430 PANTHER PTHR11778:SF0 1 429 1.3E-220 T 22-04-2016 YE1528 889cec898a5415bf21c2fd885674ed96 430 PANTHER PTHR11778 1 429 1.3E-220 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 YE1528 889cec898a5415bf21c2fd885674ed96 430 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 428 41.668 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 YE1528 889cec898a5415bf21c2fd885674ed96 430 PRINTS PR00981 Seryl-tRNA synthetase signature 357 373 1.2E-33 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 YE1528 889cec898a5415bf21c2fd885674ed96 430 PRINTS PR00981 Seryl-tRNA synthetase signature 282 295 1.2E-33 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 YE1528 889cec898a5415bf21c2fd885674ed96 430 PRINTS PR00981 Seryl-tRNA synthetase signature 339 355 1.2E-33 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 YE1528 889cec898a5415bf21c2fd885674ed96 430 PRINTS PR00981 Seryl-tRNA synthetase signature 270 282 1.2E-33 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 YE1528 889cec898a5415bf21c2fd885674ed96 430 PRINTS PR00981 Seryl-tRNA synthetase signature 322 335 1.2E-33 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 YE1528 889cec898a5415bf21c2fd885674ed96 430 SUPERFAMILY SSF46589 1 112 2.62E-30 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 YE1528 889cec898a5415bf21c2fd885674ed96 430 SUPERFAMILY SSF55681 116 425 1.49E-99 T 22-04-2016 YE1528 889cec898a5415bf21c2fd885674ed96 430 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 1.4E-29 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 YE1528 889cec898a5415bf21c2fd885674ed96 430 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 423 3.5E-181 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 YE1528 889cec898a5415bf21c2fd885674ed96 430 Gene3D G3DSA:1.10.287.40 1 104 2.1E-24 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 YE1528 889cec898a5415bf21c2fd885674ed96 430 PIRSF PIRSF001529 1 430 8.3E-183 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 YE1912 31fa88eb315db2f59d025aa0062a8c66 642 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 634 34.007 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 YE1912 31fa88eb315db2f59d025aa0062a8c66 642 Gene3D G3DSA:3.10.20.30 1 64 3.2E-24 T 22-04-2016 IPR012675 Beta-grasp domain YE1912 31fa88eb315db2f59d025aa0062a8c66 642 Gene3D G3DSA:3.30.930.10 242 530 5.2E-121 T 22-04-2016 YE1912 31fa88eb315db2f59d025aa0062a8c66 642 PANTHER PTHR11451:SF31 1 642 0.0 T 22-04-2016 YE1912 31fa88eb315db2f59d025aa0062a8c66 642 PANTHER PTHR11451 1 642 0.0 T 22-04-2016 YE1912 31fa88eb315db2f59d025aa0062a8c66 642 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 631 5.4E-243 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 YE1912 31fa88eb315db2f59d025aa0062a8c66 642 SMART SM00863 170 219 2.6E-19 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 YE1912 31fa88eb315db2f59d025aa0062a8c66 642 SUPERFAMILY SSF55186 63 241 3.79E-64 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 YE1912 31fa88eb315db2f59d025aa0062a8c66 642 Pfam PF03129 Anticodon binding domain 541 628 4.3E-21 T 22-04-2016 IPR004154 Anticodon-binding YE1912 31fa88eb315db2f59d025aa0062a8c66 642 SUPERFAMILY SSF81271 3 61 8.94E-17 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 YE1912 31fa88eb315db2f59d025aa0062a8c66 642 Gene3D G3DSA:3.30.54.20 130 187 1.6E-20 T 22-04-2016 YE1912 31fa88eb315db2f59d025aa0062a8c66 642 SUPERFAMILY SSF55681 243 525 6.49E-96 T 22-04-2016 YE1912 31fa88eb315db2f59d025aa0062a8c66 642 Gene3D G3DSA:3.30.980.10 66 129 2.9E-40 T 22-04-2016 YE1912 31fa88eb315db2f59d025aa0062a8c66 642 Gene3D G3DSA:3.30.980.10 188 223 2.9E-40 T 22-04-2016 YE1912 31fa88eb315db2f59d025aa0062a8c66 642 SUPERFAMILY SSF52954 529 636 1.15E-31 T 22-04-2016 IPR004154 Anticodon-binding YE1912 31fa88eb315db2f59d025aa0062a8c66 642 Gene3D G3DSA:3.40.50.800 532 640 4.0E-36 T 22-04-2016 IPR004154 Anticodon-binding YE1912 31fa88eb315db2f59d025aa0062a8c66 642 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 318 529 2.8E-50 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YE1912 31fa88eb315db2f59d025aa0062a8c66 642 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 172 219 3.9E-14 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 YE1912 31fa88eb315db2f59d025aa0062a8c66 642 Pfam PF02824 TGS domain 4 61 1.5E-11 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 YE1912 31fa88eb315db2f59d025aa0062a8c66 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 362 385 9.0E-55 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 YE1912 31fa88eb315db2f59d025aa0062a8c66 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 329 357 9.0E-55 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 YE1912 31fa88eb315db2f59d025aa0062a8c66 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 464 492 9.0E-55 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 YE1912 31fa88eb315db2f59d025aa0062a8c66 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 507 520 9.0E-55 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 YE1912 31fa88eb315db2f59d025aa0062a8c66 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 534 546 9.0E-55 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 YE3322 e40813c289e22724171e74ab686107f5 228 Pfam PF02976 DNA mismatch repair enzyme MutH 59 157 6.0E-35 T 22-04-2016 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 YE3322 e40813c289e22724171e74ab686107f5 228 Gene3D G3DSA:3.40.600.10 8 226 1.7E-80 T 22-04-2016 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 YE3322 e40813c289e22724171e74ab686107f5 228 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 228 154.662 T 22-04-2016 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 YE3322 e40813c289e22724171e74ab686107f5 228 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 11 226 8.1E-107 T 22-04-2016 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 YE3322 e40813c289e22724171e74ab686107f5 228 SMART SM00927 59 157 3.4E-66 T 22-04-2016 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 YE3322 e40813c289e22724171e74ab686107f5 228 SUPERFAMILY SSF52980 10 227 8.58E-83 T 22-04-2016 IPR011335 Restriction endonuclease type II-like YE3649 4fd9393bab2b4b039fdf1ef3b27a09e5 297 SUPERFAMILY SSF46689 244 291 1.48E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE3649 4fd9393bab2b4b039fdf1ef3b27a09e5 297 SMART SM00342 208 291 7.7E-27 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YE3649 4fd9393bab2b4b039fdf1ef3b27a09e5 297 Pfam PF12833 Helix-turn-helix domain 214 289 1.7E-21 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YE3649 4fd9393bab2b4b039fdf1ef3b27a09e5 297 PANTHER PTHR11019 1 296 4.2E-163 T 22-04-2016 YE3649 4fd9393bab2b4b039fdf1ef3b27a09e5 297 PANTHER PTHR11019:SF134 1 296 4.2E-163 T 22-04-2016 YE3649 4fd9393bab2b4b039fdf1ef3b27a09e5 297 SUPERFAMILY SSF46689 191 242 4.12E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE3649 4fd9393bab2b4b039fdf1ef3b27a09e5 297 Gene3D G3DSA:1.10.10.60 247 289 3.2E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE3649 4fd9393bab2b4b039fdf1ef3b27a09e5 297 Pfam PF06719 AraC-type transcriptional regulator N-terminus 29 179 5.6E-43 T 22-04-2016 IPR009594 Transcription regulator HTH, AraC, N-terminal YE3649 4fd9393bab2b4b039fdf1ef3b27a09e5 297 Gene3D G3DSA:1.10.10.60 192 246 3.7E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE0162 9158feaa2bb6524960ea150ef3c76093 93 Pfam PF13616 PPIC-type PPIASE domain 15 90 1.1E-24 T 22-04-2016 YE0162 9158feaa2bb6524960ea150ef3c76093 93 SUPERFAMILY SSF54534 4 90 2.68E-30 T 22-04-2016 YE0162 9158feaa2bb6524960ea150ef3c76093 93 PANTHER PTHR10657 2 92 2.0E-38 T 22-04-2016 YE0162 9158feaa2bb6524960ea150ef3c76093 93 Gene3D G3DSA:3.10.50.40 4 91 2.4E-35 T 22-04-2016 YE4078 a5c89ac497d308a20700775ac68bbf26 550 TIGRFAM TIGR03368 cellulose_yhjU: cellulose synthase operon protein YhjU 21 548 7.3E-231 T 22-04-2016 IPR017744 Cellulose biosynthesis protein BcsG YE4078 a5c89ac497d308a20700775ac68bbf26 550 Pfam PF11658 Cellulose biosynthesis protein BcsG 23 545 1.5E-236 T 22-04-2016 IPR017744 Cellulose biosynthesis protein BcsG YE2501 191509137e3a16f96e4a6753a02c8b81 259 Gene3D G3DSA:3.20.20.150 1 258 4.6E-86 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YE2501 191509137e3a16f96e4a6753a02c8b81 259 PANTHER PTHR12110 1 258 7.1E-143 T 22-04-2016 YE2501 191509137e3a16f96e4a6753a02c8b81 259 PANTHER PTHR12110:SF12 1 258 7.1E-143 T 22-04-2016 YE2501 191509137e3a16f96e4a6753a02c8b81 259 Pfam PF01261 Xylose isomerase-like TIM barrel 21 219 1.7E-32 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YE2501 191509137e3a16f96e4a6753a02c8b81 259 SUPERFAMILY SSF51658 1 258 1.05E-84 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YE2501 191509137e3a16f96e4a6753a02c8b81 259 PIRSF PIRSF006241 1 259 1.3E-89 T 22-04-2016 IPR026040 Hydroxypyruvate isomerase-like KEGG: 00630+5.3.1.22 YE3816 aba0cdd2970716c4f0acbb038f36a55c 321 Pfam PF01207 Dihydrouridine synthase (Dus) 14 318 3.5E-114 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 YE3816 aba0cdd2970716c4f0acbb038f36a55c 321 PANTHER PTHR11082 1 318 1.8E-149 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 YE3816 aba0cdd2970716c4f0acbb038f36a55c 321 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 48.701 T 22-04-2016 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 YE3816 aba0cdd2970716c4f0acbb038f36a55c 321 PANTHER PTHR11082:SF25 1 318 1.8E-149 T 22-04-2016 YE3816 aba0cdd2970716c4f0acbb038f36a55c 321 PIRSF PIRSF006621 1 321 1.9E-100 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 YE3816 aba0cdd2970716c4f0acbb038f36a55c 321 Gene3D G3DSA:3.20.20.70 8 244 2.8E-82 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YE3816 aba0cdd2970716c4f0acbb038f36a55c 321 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 YE3816 aba0cdd2970716c4f0acbb038f36a55c 321 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 319 7.7E-136 T 22-04-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 YE3816 aba0cdd2970716c4f0acbb038f36a55c 321 SUPERFAMILY SSF51395 11 319 1.15E-88 T 22-04-2016 YE3816 aba0cdd2970716c4f0acbb038f36a55c 321 Gene3D G3DSA:1.10.1200.80 252 320 7.7E-17 T 22-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 YE3247 791f843879339c393f5d95b981e12c07 880 PANTHER PTHR11117:SF8 29 699 3.9E-231 T 22-04-2016 YE3247 791f843879339c393f5d95b981e12c07 880 Gene3D G3DSA:3.40.50.261 278 439 2.4E-14 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 YE3247 791f843879339c393f5d95b981e12c07 880 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 147 280 5.3E-45 T 22-04-2016 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain YE3247 791f843879339c393f5d95b981e12c07 880 Gene3D G3DSA:3.40.50.261 129 277 1.6E-24 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 YE3247 791f843879339c393f5d95b981e12c07 880 SUPERFAMILY SSF55729 701 866 6.56E-21 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE3247 791f843879339c393f5d95b981e12c07 880 SUPERFAMILY SSF55729 616 664 6.56E-21 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE3247 791f843879339c393f5d95b981e12c07 880 PANTHER PTHR11117 29 699 3.9E-231 T 22-04-2016 YE3247 791f843879339c393f5d95b981e12c07 880 SUPERFAMILY SSF52210 125 286 1.14E-36 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 YE3247 791f843879339c393f5d95b981e12c07 880 SUPERFAMILY SSF51735 2 136 6.19E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3247 791f843879339c393f5d95b981e12c07 880 Pfam PF00583 Acetyltransferase (GNAT) family 792 863 8.7E-11 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YE3247 791f843879339c393f5d95b981e12c07 880 Pfam PF13549 ATP-grasp domain 472 694 4.6E-74 T 22-04-2016 YE3247 791f843879339c393f5d95b981e12c07 880 Gene3D G3DSA:3.40.630.30 718 878 1.0E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE3247 791f843879339c393f5d95b981e12c07 880 SUPERFAMILY SSF52210 287 447 9.16E-39 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 YE3247 791f843879339c393f5d95b981e12c07 880 Pfam PF13380 CoA binding domain 13 129 1.9E-21 T 22-04-2016 IPR003781 CoA-binding GO:0048037 YE3247 791f843879339c393f5d95b981e12c07 880 Gene3D G3DSA:3.40.50.720 1 128 3.4E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3247 791f843879339c393f5d95b981e12c07 880 SUPERFAMILY SSF56059 481 692 2.75E-25 T 22-04-2016 YE3247 791f843879339c393f5d95b981e12c07 880 SMART SM00881 9 104 2.8E-24 T 22-04-2016 IPR003781 CoA-binding GO:0048037 YE3185 dfda6ee82f87c2921100db1e6ed542a2 304 SUPERFAMILY SSF53067 2 299 4.87E-59 T 22-04-2016 YE3185 dfda6ee82f87c2921100db1e6ed542a2 304 ProSitePatterns PS01125 ROK family signature. 130 157 - T 22-04-2016 IPR000600 ROK family YE3185 dfda6ee82f87c2921100db1e6ed542a2 304 Gene3D G3DSA:3.30.420.40 2 132 1.3E-35 T 22-04-2016 YE3185 dfda6ee82f87c2921100db1e6ed542a2 304 PANTHER PTHR18964:SF123 3 299 7.5E-99 T 22-04-2016 YE3185 dfda6ee82f87c2921100db1e6ed542a2 304 Pfam PF00480 ROK family 3 300 3.2E-84 T 22-04-2016 IPR000600 ROK family YE3185 dfda6ee82f87c2921100db1e6ed542a2 304 Gene3D G3DSA:3.30.420.40 133 280 7.6E-49 T 22-04-2016 YE3185 dfda6ee82f87c2921100db1e6ed542a2 304 PANTHER PTHR18964 3 299 7.5E-99 T 22-04-2016 YE3487 1bd49f9377ca56a4386d9822d0dea4bb 124 Pfam PF11990 Protein of unknown function (DUF3487) 4 115 6.9E-33 T 22-04-2016 IPR021877 Protein of unknown function DUF3487 YE3487 1bd49f9377ca56a4386d9822d0dea4bb 124 TIGRFAM TIGR03750 conj_TIGR03750: conjugative transfer region protein, TIGR03750 family 4 114 5.4E-39 T 22-04-2016 IPR021877 Protein of unknown function DUF3487 YE1676 78f8c0307ef0a64e1e5cd28cc5518d34 348 TIGRFAM TIGR01551 major_capsid_P2: phage major capsid protein, P2 family 7 341 6.4E-88 T 22-04-2016 IPR006441 Bacteriophage P2, GpN, major capsid GO:0019028 YE1676 78f8c0307ef0a64e1e5cd28cc5518d34 348 Pfam PF05125 Phage major capsid protein, P2 family 8 340 9.4E-127 T 22-04-2016 IPR006441 Bacteriophage P2, GpN, major capsid GO:0019028 YE0563 9be98a86cdd3e7b41252ab4b5ede031e 147 PANTHER PTHR23091 3 146 1.3E-34 T 22-04-2016 YE0563 9be98a86cdd3e7b41252ab4b5ede031e 147 PANTHER PTHR23091:SF247 3 146 1.3E-34 T 22-04-2016 YE0563 9be98a86cdd3e7b41252ab4b5ede031e 147 SUPERFAMILY SSF55729 3 145 9.51E-31 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE0563 9be98a86cdd3e7b41252ab4b5ede031e 147 Pfam PF13673 Acetyltransferase (GNAT) domain 37 125 3.7E-15 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YE0563 9be98a86cdd3e7b41252ab4b5ede031e 147 Gene3D G3DSA:3.40.630.30 3 145 1.1E-31 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE0563 9be98a86cdd3e7b41252ab4b5ede031e 147 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 12 142 3.7E-44 T 22-04-2016 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 YE1761 61f2f0bb40766d7b4319dbcf39e07b00 463 PANTHER PTHR11785 1 454 3.6E-292 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YE1761 61f2f0bb40766d7b4319dbcf39e07b00 463 PIRSF PIRSF006060 1 462 4.6E-78 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YE1761 61f2f0bb40766d7b4319dbcf39e07b00 463 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 YE1761 61f2f0bb40766d7b4319dbcf39e07b00 463 PANTHER PTHR11785:SF26 1 454 3.6E-292 T 22-04-2016 YE1761 61f2f0bb40766d7b4319dbcf39e07b00 463 Pfam PF00324 Amino acid permease 18 451 8.4E-118 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 YE2886 4134317eda1a8ef22d8b34550c404508 312 SUPERFAMILY SSF51395 1 302 1.61E-70 T 22-04-2016 YE2886 4134317eda1a8ef22d8b34550c404508 312 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 YE2886 4134317eda1a8ef22d8b34550c404508 312 Pfam PF01207 Dihydrouridine synthase (Dus) 4 295 3.7E-89 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 YE2886 4134317eda1a8ef22d8b34550c404508 312 PIRSF PIRSF006621 1 311 5.4E-82 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 YE2886 4134317eda1a8ef22d8b34550c404508 312 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 310 51.707 T 22-04-2016 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 YE2886 4134317eda1a8ef22d8b34550c404508 312 PANTHER PTHR11082 1 311 9.9E-203 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 YE2886 4134317eda1a8ef22d8b34550c404508 312 PANTHER PTHR11082:SF26 1 311 9.9E-203 T 22-04-2016 YE2886 4134317eda1a8ef22d8b34550c404508 312 Gene3D G3DSA:3.20.20.70 2 240 1.0E-63 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YE1781 d69a9492868141608e53027c542c5fb1 456 PANTHER PTHR11236:SF18 30 454 9.2E-172 T 22-04-2016 YE1781 d69a9492868141608e53027c542c5fb1 456 PRINTS PR00095 Anthranilate synthase component I signature 292 305 1.0E-17 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 YE1781 d69a9492868141608e53027c542c5fb1 456 PRINTS PR00095 Anthranilate synthase component I signature 306 319 1.0E-17 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 YE1781 d69a9492868141608e53027c542c5fb1 456 PRINTS PR00095 Anthranilate synthase component I signature 386 400 1.0E-17 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 YE1781 d69a9492868141608e53027c542c5fb1 456 PRINTS PR00095 Anthranilate synthase component I signature 401 415 1.0E-17 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 YE1781 d69a9492868141608e53027c542c5fb1 456 Pfam PF00425 chorismate binding enzyme 190 444 2.2E-94 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal YE1781 d69a9492868141608e53027c542c5fb1 456 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 107 447 5.5E-130 T 22-04-2016 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543|UniPathway: UPA00077 YE1781 d69a9492868141608e53027c542c5fb1 456 Gene3D G3DSA:3.60.120.10 25 454 1.1E-152 T 22-04-2016 IPR005801 ADC synthase GO:0009058 YE1781 d69a9492868141608e53027c542c5fb1 456 PANTHER PTHR11236 30 454 9.2E-172 T 22-04-2016 YE1781 d69a9492868141608e53027c542c5fb1 456 SUPERFAMILY SSF56322 7 452 5.36E-146 T 22-04-2016 IPR005801 ADC synthase GO:0009058 YE1781 d69a9492868141608e53027c542c5fb1 456 Pfam PF04715 Anthranilate synthase component I, N terminal region 18 154 6.2E-29 T 22-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 YE0248 8f580cbe1c58c5f5818a77eb53670e9a 317 SUPERFAMILY SSF46785 1 109 6.53E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0248 8f580cbe1c58c5f5818a77eb53670e9a 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.6E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE0248 8f580cbe1c58c5f5818a77eb53670e9a 317 Gene3D G3DSA:3.40.190.10 91 177 1.5E-15 T 22-04-2016 YE0248 8f580cbe1c58c5f5818a77eb53670e9a 317 PANTHER PTHR30126:SF25 1 303 2.5E-200 T 22-04-2016 YE0248 8f580cbe1c58c5f5818a77eb53670e9a 317 Gene3D G3DSA:1.10.10.10 1 86 4.6E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0248 8f580cbe1c58c5f5818a77eb53670e9a 317 Gene3D G3DSA:3.40.190.10 178 253 6.5E-18 T 22-04-2016 YE0248 8f580cbe1c58c5f5818a77eb53670e9a 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.2E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE0248 8f580cbe1c58c5f5818a77eb53670e9a 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.2E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE0248 8f580cbe1c58c5f5818a77eb53670e9a 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.2E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE0248 8f580cbe1c58c5f5818a77eb53670e9a 317 PANTHER PTHR30126 1 303 2.5E-200 T 22-04-2016 YE0248 8f580cbe1c58c5f5818a77eb53670e9a 317 Pfam PF03466 LysR substrate binding domain 87 288 9.4E-41 T 22-04-2016 IPR005119 LysR, substrate-binding YE0248 8f580cbe1c58c5f5818a77eb53670e9a 317 SUPERFAMILY SSF53850 88 290 7.91E-38 T 22-04-2016 YE1541 5df1095b805aa14febf0fdd98e2f8904 94 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 YE1541 5df1095b805aa14febf0fdd98e2f8904 94 Pfam PF00216 Bacterial DNA-binding protein 1 91 6.4E-29 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YE1541 5df1095b805aa14febf0fdd98e2f8904 94 SUPERFAMILY SSF47729 1 91 4.12E-29 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 YE1541 5df1095b805aa14febf0fdd98e2f8904 94 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 1.2E-18 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YE1541 5df1095b805aa14febf0fdd98e2f8904 94 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 1.2E-18 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YE1541 5df1095b805aa14febf0fdd98e2f8904 94 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 1.2E-18 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YE1541 5df1095b805aa14febf0fdd98e2f8904 94 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 29.989 T 22-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 YE1541 5df1095b805aa14febf0fdd98e2f8904 94 Gene3D G3DSA:4.10.520.10 1 91 9.1E-33 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 YE1541 5df1095b805aa14febf0fdd98e2f8904 94 PANTHER PTHR33175 1 93 6.2E-48 T 22-04-2016 YE1541 5df1095b805aa14febf0fdd98e2f8904 94 SMART SM00411 1 91 1.5E-40 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YE1541 5df1095b805aa14febf0fdd98e2f8904 94 PANTHER PTHR33175:SF5 1 93 6.2E-48 T 22-04-2016 YE1541 5df1095b805aa14febf0fdd98e2f8904 94 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 93 1.9E-50 T 22-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 YE2899 fd2bfc81453b588f01b2e2b12f545cec 326 Pfam PF04055 Radical SAM superfamily 18 178 4.7E-29 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 YE2899 fd2bfc81453b588f01b2e2b12f545cec 326 PANTHER PTHR22960 1 282 4.0E-139 T 22-04-2016 YE2899 fd2bfc81453b588f01b2e2b12f545cec 326 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 4 326 3.3E-106 T 22-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 YE2899 fd2bfc81453b588f01b2e2b12f545cec 326 SMART SM00729 13 216 1.2E-4 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 YE2899 fd2bfc81453b588f01b2e2b12f545cec 326 Pfam PF06463 Molybdenum Cofactor Synthesis C 183 309 8.1E-41 T 22-04-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 YE2899 fd2bfc81453b588f01b2e2b12f545cec 326 SUPERFAMILY SSF102114 4 275 2.35E-71 T 22-04-2016 YE2899 fd2bfc81453b588f01b2e2b12f545cec 326 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 19 30 - T 22-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 YE2899 fd2bfc81453b588f01b2e2b12f545cec 326 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 4 326 38.639 T 22-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 YE2899 fd2bfc81453b588f01b2e2b12f545cec 326 Gene3D G3DSA:3.20.20.70 3 304 2.1E-73 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YE2899 fd2bfc81453b588f01b2e2b12f545cec 326 Pfam PF13353 4Fe-4S single cluster domain 22 122 3.5E-6 T 22-04-2016 YE3908 c3585cd03e547f9676f7ec2390414c9f 177 Pfam PF00347 Ribosomal protein L6 90 164 6.4E-19 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 YE3908 c3585cd03e547f9676f7ec2390414c9f 177 Pfam PF00347 Ribosomal protein L6 11 82 2.7E-19 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 YE3908 c3585cd03e547f9676f7ec2390414c9f 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 2.3E-73 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 YE3908 c3585cd03e547f9676f7ec2390414c9f 177 Gene3D G3DSA:3.90.930.12 2 82 9.8E-29 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 YE3908 c3585cd03e547f9676f7ec2390414c9f 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 2.0E-33 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 YE3908 c3585cd03e547f9676f7ec2390414c9f 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 2.0E-33 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 YE3908 c3585cd03e547f9676f7ec2390414c9f 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 2.0E-33 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 YE3908 c3585cd03e547f9676f7ec2390414c9f 177 PANTHER PTHR11655 1 176 4.1E-88 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 YE3908 c3585cd03e547f9676f7ec2390414c9f 177 SUPERFAMILY SSF56053 83 177 9.08E-36 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 YE3908 c3585cd03e547f9676f7ec2390414c9f 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.625 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 YE3908 c3585cd03e547f9676f7ec2390414c9f 177 Gene3D G3DSA:3.90.930.12 83 177 3.9E-40 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 YE3908 c3585cd03e547f9676f7ec2390414c9f 177 PIRSF PIRSF002162 1 177 4.1E-44 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 YE3908 c3585cd03e547f9676f7ec2390414c9f 177 PANTHER PTHR11655:SF14 1 176 4.1E-88 T 22-04-2016 YE3908 c3585cd03e547f9676f7ec2390414c9f 177 SUPERFAMILY SSF56053 1 82 2.09E-23 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 YE3908 c3585cd03e547f9676f7ec2390414c9f 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 22-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0689 9bd49341d05fb130f2bc55369311cd3b 484 Gene3D G3DSA:3.40.50.300 210 474 1.5E-89 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0689 9bd49341d05fb130f2bc55369311cd3b 484 SUPERFAMILY SSF160246 14 70 1.83E-6 T 22-04-2016 YE0689 9bd49341d05fb130f2bc55369311cd3b 484 Pfam PF00437 Type II/IV secretion system protein 113 372 2.1E-76 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 YE0689 9bd49341d05fb130f2bc55369311cd3b 484 PANTHER PTHR30258 15 483 1.1E-191 T 22-04-2016 YE0689 9bd49341d05fb130f2bc55369311cd3b 484 Gene3D G3DSA:3.30.450.90 86 206 1.3E-44 T 22-04-2016 YE0689 9bd49341d05fb130f2bc55369311cd3b 484 PANTHER PTHR30258:SF1 15 483 1.1E-191 T 22-04-2016 YE0689 9bd49341d05fb130f2bc55369311cd3b 484 SUPERFAMILY SSF52540 87 474 1.46E-92 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0689 9bd49341d05fb130f2bc55369311cd3b 484 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 14 70 2.1E-5 T 22-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 YE0689 9bd49341d05fb130f2bc55369311cd3b 484 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 300 314 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 YE1537 f6a098b69a2f7c241b8085d5279f0acc 361 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 360 51.911 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 YE1537 f6a098b69a2f7c241b8085d5279f0acc 361 Gene3D G3DSA:3.90.1150.10 259 360 3.6E-41 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YE1537 f6a098b69a2f7c241b8085d5279f0acc 361 Gene3D G3DSA:3.40.640.10 17 258 6.7E-107 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YE1537 f6a098b69a2f7c241b8085d5279f0acc 361 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 188 207 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site YE1537 f6a098b69a2f7c241b8085d5279f0acc 361 SUPERFAMILY SSF53383 1 359 2.1E-119 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YE1537 f6a098b69a2f7c241b8085d5279f0acc 361 PANTHER PTHR21152:SF1 3 361 2.3E-193 T 22-04-2016 YE1537 f6a098b69a2f7c241b8085d5279f0acc 361 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 360 1.6E-157 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 YE1537 f6a098b69a2f7c241b8085d5279f0acc 361 Pfam PF00266 Aminotransferase class-V 4 349 1.7E-68 T 22-04-2016 IPR000192 Aminotransferase class V domain YE1537 f6a098b69a2f7c241b8085d5279f0acc 361 PANTHER PTHR21152 3 361 2.3E-193 T 22-04-2016 YE1537 f6a098b69a2f7c241b8085d5279f0acc 361 PIRSF PIRSF000525 1 361 5.1E-151 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 YE3073 e56f90a2ad6f59db22e1721e6f092f49 465 Pfam PF00483 Nucleotidyl transferase 4 284 4.2E-73 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 YE3073 e56f90a2ad6f59db22e1721e6f092f49 465 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 2 464 2.8E-237 T 22-04-2016 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 YE3073 e56f90a2ad6f59db22e1721e6f092f49 465 PANTHER PTHR12526:SF387 152 287 3.1E-109 T 22-04-2016 YE3073 e56f90a2ad6f59db22e1721e6f092f49 465 PANTHER PTHR12526:SF387 350 462 3.1E-109 T 22-04-2016 YE3073 e56f90a2ad6f59db22e1721e6f092f49 465 SUPERFAMILY SSF51182 183 462 5.34E-79 T 22-04-2016 IPR011051 RmlC-like cupin domain YE3073 e56f90a2ad6f59db22e1721e6f092f49 465 Gene3D G3DSA:2.60.120.10 356 463 1.6E-36 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YE3073 e56f90a2ad6f59db22e1721e6f092f49 465 PANTHER PTHR12526 152 287 3.1E-109 T 22-04-2016 YE3073 e56f90a2ad6f59db22e1721e6f092f49 465 PANTHER PTHR12526 350 462 3.1E-109 T 22-04-2016 YE3073 e56f90a2ad6f59db22e1721e6f092f49 465 SUPERFAMILY SSF53448 2 280 3.9E-74 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YE3073 e56f90a2ad6f59db22e1721e6f092f49 465 Gene3D G3DSA:3.90.550.10 2 269 8.9E-101 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YE3073 e56f90a2ad6f59db22e1721e6f092f49 465 Pfam PF01050 Mannose-6-phosphate isomerase 313 462 7.3E-61 T 22-04-2016 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 YE3509 b0ba673eed60dfa610afe6c3b432b7c4 180 Pfam PF12101 Protein of unknown function (DUF3577) 33 161 1.0E-50 T 22-04-2016 IPR021960 Protein of unknown function DUF3577 YE0678 20fa4dbd31f6a40cda9fa1046a2dd3d4 311 Hamap MF_00388 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [lpxC]. 7 286 49.159 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 YE0678 20fa4dbd31f6a40cda9fa1046a2dd3d4 311 PANTHER PTHR33694 5 311 1.1E-147 T 22-04-2016 YE0678 20fa4dbd31f6a40cda9fa1046a2dd3d4 311 SUPERFAMILY SSF54211 8 129 1.06E-41 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YE0678 20fa4dbd31f6a40cda9fa1046a2dd3d4 311 PANTHER PTHR33694:SF1 5 311 1.1E-147 T 22-04-2016 YE0678 20fa4dbd31f6a40cda9fa1046a2dd3d4 311 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 9 281 7.7E-109 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 YE0678 20fa4dbd31f6a40cda9fa1046a2dd3d4 311 Gene3D G3DSA:3.30.1700.10 134 288 9.7E-63 T 22-04-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 YE0678 20fa4dbd31f6a40cda9fa1046a2dd3d4 311 SUPERFAMILY SSF54211 139 283 1.44E-54 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YE0678 20fa4dbd31f6a40cda9fa1046a2dd3d4 311 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 7 306 2.9E-159 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 YE0678 20fa4dbd31f6a40cda9fa1046a2dd3d4 311 Gene3D G3DSA:3.30.230.20 8 130 8.7E-46 T 22-04-2016 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 YE2715 ef02349d123cdd62e9344a35e79ecea1 237 PIRSF PIRSF036427 1 236 1.4E-71 T 22-04-2016 IPR012382 Precorrin-2 C(20)-methyltransferase GO:0008757|GO:0009236|GO:0030788 YE2715 ef02349d123cdd62e9344a35e79ecea1 237 TIGRFAM TIGR01467 cobI_cbiL: precorrin-2 C(20)-methyltransferase 3 231 7.7E-77 T 22-04-2016 IPR006364 Precorrin-2 C(20)-methyltransferase domain GO:0008757|GO:0009236 YE2715 ef02349d123cdd62e9344a35e79ecea1 237 Gene3D G3DSA:3.40.1010.10 1 127 6.1E-27 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 YE2715 ef02349d123cdd62e9344a35e79ecea1 237 PANTHER PTHR21091 1 151 3.7E-62 T 22-04-2016 YE2715 ef02349d123cdd62e9344a35e79ecea1 237 SUPERFAMILY SSF53790 1 231 1.83E-42 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 YE2715 ef02349d123cdd62e9344a35e79ecea1 237 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 210 1.8E-44 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 YE2715 ef02349d123cdd62e9344a35e79ecea1 237 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 94 126 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YE2715 ef02349d123cdd62e9344a35e79ecea1 237 PANTHER PTHR21091:SF121 1 151 3.7E-62 T 22-04-2016 YE3886 908437d13212b2d3498d07af5f4ed29e 178 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 104 140 2.1E-14 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 YE3886 908437d13212b2d3498d07af5f4ed29e 178 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 11 47 4.9E-15 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 YE3886 908437d13212b2d3498d07af5f4ed29e 178 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 60 96 8.7E-18 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 YE3886 908437d13212b2d3498d07af5f4ed29e 178 PANTHER PTHR11390 7 175 4.4E-92 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 YE3886 908437d13212b2d3498d07af5f4ed29e 178 PANTHER PTHR11390:SF26 7 175 4.4E-92 T 22-04-2016 YE3886 908437d13212b2d3498d07af5f4ed29e 178 SUPERFAMILY SSF57783 10 48 1.68E-12 T 22-04-2016 YE3886 908437d13212b2d3498d07af5f4ed29e 178 Gene3D G3DSA:3.30.65.10 100 135 5.3E-6 T 22-04-2016 YE3886 908437d13212b2d3498d07af5f4ed29e 178 Gene3D G3DSA:3.30.65.10 58 94 2.6E-15 T 22-04-2016 YE3886 908437d13212b2d3498d07af5f4ed29e 178 Gene3D G3DSA:3.30.65.10 12 47 9.6E-14 T 22-04-2016 YE3886 908437d13212b2d3498d07af5f4ed29e 178 SUPERFAMILY SSF57783 58 97 9.52E-14 T 22-04-2016 YE2208 5bb87d6325ce165a958306cea3fc09e4 262 SUPERFAMILY SSF89550 2 63 5.3E-41 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 YE2208 5bb87d6325ce165a958306cea3fc09e4 262 SUPERFAMILY SSF89550 145 255 5.3E-41 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 YE2208 5bb87d6325ce165a958306cea3fc09e4 262 PANTHER PTHR30007 1 255 4.3E-96 T 22-04-2016 YE2208 5bb87d6325ce165a958306cea3fc09e4 262 Gene3D G3DSA:3.20.20.140 2 68 6.1E-33 T 22-04-2016 YE2208 5bb87d6325ce165a958306cea3fc09e4 262 Gene3D G3DSA:3.20.20.140 137 240 6.1E-33 T 22-04-2016 YE2208 5bb87d6325ce165a958306cea3fc09e4 262 PANTHER PTHR30007:SF4 1 255 4.3E-96 T 22-04-2016 YE1859 c744d6432418b0e32c35aadc562c661b 185 Pfam PF05229 Spore Coat Protein U domain 33 182 5.5E-30 T 22-04-2016 IPR007893 Spore coat protein U YE1859 c744d6432418b0e32c35aadc562c661b 185 PANTHER PTHR37089:SF3 33 185 2.4E-67 T 22-04-2016 YE1859 c744d6432418b0e32c35aadc562c661b 185 PANTHER PTHR37089 33 185 2.4E-67 T 22-04-2016 YE1859 c744d6432418b0e32c35aadc562c661b 185 SMART SM00972 122 182 2.6E-19 T 22-04-2016 IPR007893 Spore coat protein U YE2374 154f0c4e4a245f1604b47c33ff21830a 373 SMART SM00474 3 171 8.2E-41 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 YE2374 154f0c4e4a245f1604b47c33ff21830a 373 PANTHER PTHR12124 2 358 1.1E-88 T 22-04-2016 YE2374 154f0c4e4a245f1604b47c33ff21830a 373 PANTHER PTHR12124:SF42 2 358 1.1E-88 T 22-04-2016 YE2374 154f0c4e4a245f1604b47c33ff21830a 373 Gene3D G3DSA:3.30.420.10 2 177 4.3E-12 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE2374 154f0c4e4a245f1604b47c33ff21830a 373 Pfam PF01612 3'-5' exonuclease 3 168 5.9E-36 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 YE2374 154f0c4e4a245f1604b47c33ff21830a 373 SUPERFAMILY SSF53098 2 210 4.99E-63 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE2374 154f0c4e4a245f1604b47c33ff21830a 373 SUPERFAMILY SSF47819 295 372 6.02E-23 T 22-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 YE2374 154f0c4e4a245f1604b47c33ff21830a 373 TIGRFAM TIGR01388 rnd: ribonuclease D 5 371 2.9E-145 T 22-04-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 YE2374 154f0c4e4a245f1604b47c33ff21830a 373 SUPERFAMILY SSF47819 194 300 4.58E-29 T 22-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 YE2374 154f0c4e4a245f1604b47c33ff21830a 373 Hamap MF_01899 Ribonuclease D [rnd]. 3 371 45.445 T 22-04-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 YE2374 154f0c4e4a245f1604b47c33ff21830a 373 SMART SM00341 210 289 5.7E-16 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 YE2374 154f0c4e4a245f1604b47c33ff21830a 373 Pfam PF00570 HRDC domain 213 279 7.8E-16 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 YE2819 f83821134807f041a958140f14f3bcb3 390 PANTHER PTHR23537:SF1 3 382 1.8E-54 T 22-04-2016 YE2819 f83821134807f041a958140f14f3bcb3 390 PANTHER PTHR23537 3 382 1.8E-54 T 22-04-2016 YE2819 f83821134807f041a958140f14f3bcb3 390 SUPERFAMILY SSF103473 6 375 8.89E-24 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE2819 f83821134807f041a958140f14f3bcb3 390 Gene3D G3DSA:1.20.1250.20 9 187 3.2E-12 T 22-04-2016 YE2819 f83821134807f041a958140f14f3bcb3 390 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 13 370 4.8E-87 T 22-04-2016 IPR010645 Uncharacterised MFS-type transporter YbfB YE0256 03367bb3dfefbb6d3ea0348ebf1a5902 251 Gene3D G3DSA:3.40.50.150 24 247 4.1E-59 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE0256 03367bb3dfefbb6d3ea0348ebf1a5902 251 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 36 51 - T 22-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 YE0256 03367bb3dfefbb6d3ea0348ebf1a5902 251 PANTHER PTHR10108:SF864 1 251 1.7E-188 T 22-04-2016 YE0256 03367bb3dfefbb6d3ea0348ebf1a5902 251 PANTHER PTHR10108 1 251 1.7E-188 T 22-04-2016 YE0256 03367bb3dfefbb6d3ea0348ebf1a5902 251 Pfam PF01209 ubiE/COQ5 methyltransferase family 16 250 5.8E-107 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 YE0256 03367bb3dfefbb6d3ea0348ebf1a5902 251 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 16 250 39.373 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 YE0256 03367bb3dfefbb6d3ea0348ebf1a5902 251 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 158 172 - T 22-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 YE0256 03367bb3dfefbb6d3ea0348ebf1a5902 251 SUPERFAMILY SSF53335 19 248 2.63E-51 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE0256 03367bb3dfefbb6d3ea0348ebf1a5902 251 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 25 250 3.9E-87 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 YE0132 77668fe73ddc089d5e35e557e6951d46 243 PANTHER PTHR10430:SF19 1 168 1.8E-110 T 22-04-2016 YE0132 77668fe73ddc089d5e35e557e6951d46 243 Gene3D G3DSA:3.40.30.10 169 241 7.8E-28 T 22-04-2016 IPR012336 Thioredoxin-like fold YE0132 77668fe73ddc089d5e35e557e6951d46 243 PRINTS PR00160 Glutaredoxin signature 214 227 4.9E-15 T 22-04-2016 IPR014025 Glutaredoxin subgroup YE0132 77668fe73ddc089d5e35e557e6951d46 243 PRINTS PR00160 Glutaredoxin signature 228 241 4.9E-15 T 22-04-2016 IPR014025 Glutaredoxin subgroup YE0132 77668fe73ddc089d5e35e557e6951d46 243 PRINTS PR00160 Glutaredoxin signature 173 191 4.9E-15 T 22-04-2016 IPR014025 Glutaredoxin subgroup YE0132 77668fe73ddc089d5e35e557e6951d46 243 PANTHER PTHR10430 1 168 1.8E-110 T 22-04-2016 YE0132 77668fe73ddc089d5e35e557e6951d46 243 Pfam PF08534 Redoxin 5 160 3.3E-33 T 22-04-2016 IPR013740 Redoxin GO:0016491 YE0132 77668fe73ddc089d5e35e557e6951d46 243 ProSitePatterns PS00195 Glutaredoxin active site. 175 191 - T 22-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 YE0132 77668fe73ddc089d5e35e557e6951d46 243 TIGRFAM TIGR02190 GlrX-dom: glutaredoxin-family domain 164 242 2.6E-40 T 22-04-2016 IPR011906 Glutaredoxin domain KEGG: 00480+1.11.1.15 YE0132 77668fe73ddc089d5e35e557e6951d46 243 Gene3D G3DSA:3.40.30.10 2 163 1.1E-64 T 22-04-2016 IPR012336 Thioredoxin-like fold YE0132 77668fe73ddc089d5e35e557e6951d46 243 Pfam PF00462 Glutaredoxin 173 231 5.1E-19 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 YE0132 77668fe73ddc089d5e35e557e6951d46 243 SUPERFAMILY SSF52833 2 241 4.02E-46 T 22-04-2016 IPR012336 Thioredoxin-like fold YE0309 f7b2ad8fd831c551c8be7b92b1b83593 652 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 2.9E-19 T 22-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 YE0309 f7b2ad8fd831c551c8be7b92b1b83593 652 Gene3D G3DSA:2.30.38.10 439 515 5.1E-8 T 22-04-2016 YE0309 f7b2ad8fd831c551c8be7b92b1b83593 652 Pfam PF00501 AMP-binding enzyme 83 522 2.1E-89 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 YE0309 f7b2ad8fd831c551c8be7b92b1b83593 652 Gene3D G3DSA:3.30.300.30 518 633 2.1E-29 T 22-04-2016 YE0309 f7b2ad8fd831c551c8be7b92b1b83593 652 Gene3D G3DSA:3.40.50.980 79 266 5.9E-46 T 22-04-2016 YE0309 f7b2ad8fd831c551c8be7b92b1b83593 652 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 645 53.282 T 22-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 YE0309 f7b2ad8fd831c551c8be7b92b1b83593 652 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 643 0.0 T 22-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 YE0309 f7b2ad8fd831c551c8be7b92b1b83593 652 PANTHER PTHR24095 20 643 0.0 T 22-04-2016 YE0309 f7b2ad8fd831c551c8be7b92b1b83593 652 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 22-04-2016 IPR020845 AMP-binding, conserved site YE0309 f7b2ad8fd831c551c8be7b92b1b83593 652 PANTHER PTHR24095:SF178 20 643 0.0 T 22-04-2016 YE0309 f7b2ad8fd831c551c8be7b92b1b83593 652 SUPERFAMILY SSF56801 9 643 8.11E-190 T 22-04-2016 YE0309 f7b2ad8fd831c551c8be7b92b1b83593 652 Gene3D G3DSA:3.40.50.980 267 424 3.6E-25 T 22-04-2016 YE0309 f7b2ad8fd831c551c8be7b92b1b83593 652 Pfam PF13193 AMP-binding enzyme C-terminal domain 531 609 3.3E-26 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain YE1475 6cc380dc4853ade4ee396ac391d65c4b 223 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 5 213 1.6E-84 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 YE1475 6cc380dc4853ade4ee396ac391d65c4b 223 Pfam PF01791 DeoC/LacD family aldolase 8 212 4.4E-18 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 YE1475 6cc380dc4853ade4ee396ac391d65c4b 223 SUPERFAMILY SSF51569 3 216 1.47E-79 T 22-04-2016 YE1475 6cc380dc4853ade4ee396ac391d65c4b 223 Gene3D G3DSA:3.20.20.70 4 217 5.4E-89 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YE1475 6cc380dc4853ade4ee396ac391d65c4b 223 PANTHER PTHR10889 3 217 1.5E-112 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 YE1475 6cc380dc4853ade4ee396ac391d65c4b 223 SMART SM01133 4 215 2.7E-95 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 YE1475 6cc380dc4853ade4ee396ac391d65c4b 223 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 3 217 34.895 T 22-04-2016 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 YE1475 6cc380dc4853ade4ee396ac391d65c4b 223 PIRSF PIRSF001357 2 222 2.1E-73 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 YE2635 829d199e529eef5847d51258706f71c5 379 SUPERFAMILY SSF56281 1 92 6.65E-21 T 22-04-2016 IPR001279 Metallo-beta-lactamase YE2635 829d199e529eef5847d51258706f71c5 379 SUPERFAMILY SSF56281 243 336 6.65E-21 T 22-04-2016 IPR001279 Metallo-beta-lactamase YE2635 829d199e529eef5847d51258706f71c5 379 SUPERFAMILY SSF56281 138 175 6.65E-21 T 22-04-2016 IPR001279 Metallo-beta-lactamase YE2635 829d199e529eef5847d51258706f71c5 379 Gene3D G3DSA:3.60.15.10 9 129 9.5E-21 T 22-04-2016 IPR001279 Metallo-beta-lactamase YE2635 829d199e529eef5847d51258706f71c5 379 Gene3D G3DSA:3.60.15.10 244 293 9.5E-21 T 22-04-2016 IPR001279 Metallo-beta-lactamase YE2635 829d199e529eef5847d51258706f71c5 379 Pfam PF00753 Metallo-beta-lactamase superfamily 8 73 6.9E-6 T 22-04-2016 IPR001279 Metallo-beta-lactamase YE2635 829d199e529eef5847d51258706f71c5 379 PANTHER PTHR30619 7 90 1.9E-20 T 22-04-2016 YE2635 829d199e529eef5847d51258706f71c5 379 PANTHER PTHR30619 202 335 1.9E-20 T 22-04-2016 YE3475 a4dae26c0fff4785910b00af344b6e2d 141 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 4 116 8.7E-40 T 22-04-2016 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 YE3475 a4dae26c0fff4785910b00af344b6e2d 141 SUPERFAMILY SSF52833 3 137 2.73E-37 T 22-04-2016 IPR012336 Thioredoxin-like fold YE3475 a4dae26c0fff4785910b00af344b6e2d 141 PANTHER PTHR30041 1 136 9.1E-56 T 22-04-2016 YE3475 a4dae26c0fff4785910b00af344b6e2d 141 PANTHER PTHR30041:SF0 1 136 9.1E-56 T 22-04-2016 YE3475 a4dae26c0fff4785910b00af344b6e2d 141 Gene3D G3DSA:3.40.30.10 1 140 8.0E-61 T 22-04-2016 IPR012336 Thioredoxin-like fold YE3475 a4dae26c0fff4785910b00af344b6e2d 141 Pfam PF03960 ArsC family 7 114 5.0E-19 T 22-04-2016 IPR006660 Arsenate reductase-like YE3273 fb0a08cc384a88b55af8f8783c25ae0c 168 Pfam PF07977 FabA-like domain 17 141 1.8E-40 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 YE3273 fb0a08cc384a88b55af8f8783c25ae0c 168 PANTHER PTHR30272 1 151 1.2E-89 T 22-04-2016 YE3273 fb0a08cc384a88b55af8f8783c25ae0c 168 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 8 146 4.0E-60 T 22-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 YE3273 fb0a08cc384a88b55af8f8783c25ae0c 168 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 8 149 37.239 T 22-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 YE3273 fb0a08cc384a88b55af8f8783c25ae0c 168 Gene3D G3DSA:3.10.129.10 4 147 2.7E-58 T 22-04-2016 IPR029069 HotDog domain YE3273 fb0a08cc384a88b55af8f8783c25ae0c 168 SUPERFAMILY SSF54637 10 151 8.34E-51 T 22-04-2016 IPR029069 HotDog domain YE2553 1d077d0bd005afba949326f56d3b046e 358 PANTHER PTHR30381:SF1 1 358 7.9E-231 T 22-04-2016 YE2553 1d077d0bd005afba949326f56d3b046e 358 PANTHER PTHR30381 1 358 7.9E-231 T 22-04-2016 YE2553 1d077d0bd005afba949326f56d3b046e 358 Hamap MF_00416 Flagellar P-ring protein [flgI]. 1 358 37.911 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YE2553 1d077d0bd005afba949326f56d3b046e 358 Pfam PF02119 Flagellar P-ring protein 14 357 2.7E-136 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YE2553 1d077d0bd005afba949326f56d3b046e 358 PRINTS PR01010 Flagellar P-ring protein signature 154 172 1.7E-89 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YE2553 1d077d0bd005afba949326f56d3b046e 358 PRINTS PR01010 Flagellar P-ring protein signature 49 64 1.7E-89 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YE2553 1d077d0bd005afba949326f56d3b046e 358 PRINTS PR01010 Flagellar P-ring protein signature 114 132 1.7E-89 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YE2553 1d077d0bd005afba949326f56d3b046e 358 PRINTS PR01010 Flagellar P-ring protein signature 14 29 1.7E-89 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YE2553 1d077d0bd005afba949326f56d3b046e 358 PRINTS PR01010 Flagellar P-ring protein signature 29 44 1.7E-89 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YE2553 1d077d0bd005afba949326f56d3b046e 358 PRINTS PR01010 Flagellar P-ring protein signature 244 256 1.7E-89 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YE2553 1d077d0bd005afba949326f56d3b046e 358 PRINTS PR01010 Flagellar P-ring protein signature 75 94 1.7E-89 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YE2553 1d077d0bd005afba949326f56d3b046e 358 PRINTS PR01010 Flagellar P-ring protein signature 97 114 1.7E-89 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YE2553 1d077d0bd005afba949326f56d3b046e 358 PRINTS PR01010 Flagellar P-ring protein signature 180 198 1.7E-89 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 YE3209 2ffbe7bb67cacca7213a406ab7ebeacf 322 PANTHER PTHR10314:SF124 8 319 1.9E-170 T 22-04-2016 YE3209 2ffbe7bb67cacca7213a406ab7ebeacf 322 Gene3D G3DSA:3.40.50.1100 73 320 5.9E-69 T 22-04-2016 YE3209 2ffbe7bb67cacca7213a406ab7ebeacf 322 SUPERFAMILY SSF53686 8 318 1.7E-96 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YE3209 2ffbe7bb67cacca7213a406ab7ebeacf 322 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 19 307 1.2E-74 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YE3209 2ffbe7bb67cacca7213a406ab7ebeacf 322 PANTHER PTHR10314 8 319 1.9E-170 T 22-04-2016 YE3609 e06cb81809ff7ef1c107c62d619b7102 371 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 38 60 4.0E-68 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 YE3609 e06cb81809ff7ef1c107c62d619b7102 371 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 223 241 4.0E-68 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 YE3609 e06cb81809ff7ef1c107c62d619b7102 371 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 61 85 4.0E-68 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 YE3609 e06cb81809ff7ef1c107c62d619b7102 371 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 179 202 4.0E-68 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 YE3609 e06cb81809ff7ef1c107c62d619b7102 371 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 247 273 4.0E-68 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 YE3609 e06cb81809ff7ef1c107c62d619b7102 371 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 150 174 4.0E-68 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 YE3609 e06cb81809ff7ef1c107c62d619b7102 371 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 107 130 4.0E-68 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 YE3609 e06cb81809ff7ef1c107c62d619b7102 371 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 205 222 4.0E-68 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 YE3609 e06cb81809ff7ef1c107c62d619b7102 371 PANTHER PTHR30013 1 364 1.1E-249 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 YE3609 e06cb81809ff7ef1c107c62d619b7102 371 Gene3D G3DSA:4.10.480.10 218 294 5.2E-31 T 22-04-2016 IPR027394 Cytochrome-c3 hydrogenase, C-terminal YE3609 e06cb81809ff7ef1c107c62d619b7102 371 PANTHER PTHR30013:SF8 1 364 1.1E-249 T 22-04-2016 YE3609 e06cb81809ff7ef1c107c62d619b7102 371 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 218 296 1.6E-26 T 22-04-2016 IPR027394 Cytochrome-c3 hydrogenase, C-terminal YE3609 e06cb81809ff7ef1c107c62d619b7102 371 PIRSF PIRSF000310 1 363 2.9E-135 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 YE3609 e06cb81809ff7ef1c107c62d619b7102 371 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 7 31 3.8E-6 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal YE3609 e06cb81809ff7ef1c107c62d619b7102 371 SUPERFAMILY SSF56770 40 296 4.6E-85 T 22-04-2016 YE3609 e06cb81809ff7ef1c107c62d619b7102 371 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 4 359 2.6E-173 T 22-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 YE3609 e06cb81809ff7ef1c107c62d619b7102 371 Gene3D G3DSA:3.40.50.700 41 216 1.3E-60 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 YE3609 e06cb81809ff7ef1c107c62d619b7102 371 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 53 198 1.3E-33 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 YE2192 433013990f7d482156c1146b1cbfcfcf 382 Gene3D G3DSA:3.40.640.10 4 251 3.5E-86 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YE2192 433013990f7d482156c1146b1cbfcfcf 382 PANTHER PTHR30244 1 380 1.8E-170 T 22-04-2016 YE2192 433013990f7d482156c1146b1cbfcfcf 382 PANTHER PTHR30244:SF3 1 380 1.8E-170 T 22-04-2016 YE2192 433013990f7d482156c1146b1cbfcfcf 382 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 12 373 1.5E-127 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase YE2192 433013990f7d482156c1146b1cbfcfcf 382 PIRSF PIRSF000390 1 380 1.5E-110 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase YE2192 433013990f7d482156c1146b1cbfcfcf 382 Hamap MF_01167 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase [arnB]. 1 379 70.828 T 22-04-2016 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB GO:0008483 KEGG: 00520+2.6.1.87|UniPathway: UPA00030|UniPathway: UPA00032 YE2192 433013990f7d482156c1146b1cbfcfcf 382 SUPERFAMILY SSF53383 4 376 3.63E-113 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YE2192 433013990f7d482156c1146b1cbfcfcf 382 Gene3D G3DSA:3.90.1150.10 253 378 2.5E-40 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YE1456 23a36fa30b0b05b34b85fd36f4ffcf28 337 Pfam PF03601 Conserved hypothetical protein 698 1 314 4.7E-106 T 22-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 YE1456 23a36fa30b0b05b34b85fd36f4ffcf28 337 TIGRFAM TIGR00698 TIGR00698: conserved hypothetical protein 2 334 1.8E-125 T 22-04-2016 IPR004630 Uncharacterised protein family UPF0324, bacteria GO:0016021 YE1456 23a36fa30b0b05b34b85fd36f4ffcf28 337 PANTHER PTHR30106 1 337 1.8E-145 T 22-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 YE1456 23a36fa30b0b05b34b85fd36f4ffcf28 337 PANTHER PTHR30106:SF2 1 337 1.8E-145 T 22-04-2016 YE2165 0869f91afc82594772feab3d7d775fba 78 Pfam PF04728 Lipoprotein leucine-zipper 26 78 4.0E-25 T 22-04-2016 IPR006817 Lipoprotein leucine-zipper GO:0019867 YE2165 0869f91afc82594772feab3d7d775fba 78 PIRSF PIRSF002855 1 78 8.5E-29 T 22-04-2016 IPR016367 Murein-lipoprotein YE2165 0869f91afc82594772feab3d7d775fba 78 Gene3D G3DSA:1.20.5.190 22 73 1.6E-24 T 22-04-2016 YE2165 0869f91afc82594772feab3d7d775fba 78 PANTHER PTHR38763 1 78 1.7E-28 T 22-04-2016 YE2165 0869f91afc82594772feab3d7d775fba 78 SUPERFAMILY SSF58042 24 73 7.72E-23 T 22-04-2016 YE2011 dcf19b3da8e93e3e9beed5d64b5bf426 536 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 421 514 1.6E-23 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YE2011 dcf19b3da8e93e3e9beed5d64b5bf426 536 TIGRFAM TIGR02004 PTS-IIBC-malX: PTS system, maltose and glucose-specific IIBC component 8 527 6.6E-261 T 22-04-2016 IPR011301 PTS system, maltose/glucose-specific IIBC component GO:0008982|GO:0009401 YE2011 dcf19b3da8e93e3e9beed5d64b5bf426 536 SUPERFAMILY SSF55604 457 528 6.8E-21 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YE2011 dcf19b3da8e93e3e9beed5d64b5bf426 536 Pfam PF02378 Phosphotransferase system, EIIC 19 361 8.9E-85 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 YE2011 dcf19b3da8e93e3e9beed5d64b5bf426 536 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 467 484 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 YE2011 dcf19b3da8e93e3e9beed5d64b5bf426 536 PANTHER PTHR30009 12 536 0.0 T 22-04-2016 YE2011 dcf19b3da8e93e3e9beed5d64b5bf426 536 PANTHER PTHR30009:SF1 12 536 0.0 T 22-04-2016 YE2011 dcf19b3da8e93e3e9beed5d64b5bf426 536 Gene3D G3DSA:3.30.1360.60 457 528 2.6E-27 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YE2011 dcf19b3da8e93e3e9beed5d64b5bf426 536 Pfam PF00367 phosphotransferase system, EIIB 458 489 3.7E-15 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 YE0529 1270fb52ab5ee0f46e1e2aceb6420fae 325 Pfam PF04198 Putative sugar-binding domain 74 322 4.7E-69 T 22-04-2016 IPR007324 Sugar-binding domain, putative GO:0030246 YE0529 1270fb52ab5ee0f46e1e2aceb6420fae 325 PANTHER PTHR34294 4 325 2.1E-142 T 22-04-2016 YE0529 1270fb52ab5ee0f46e1e2aceb6420fae 325 SUPERFAMILY SSF100950 77 322 6.05E-59 T 22-04-2016 YE0529 1270fb52ab5ee0f46e1e2aceb6420fae 325 Gene3D G3DSA:1.10.10.10 38 70 9.4E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0529 1270fb52ab5ee0f46e1e2aceb6420fae 325 PANTHER PTHR34294:SF1 4 325 2.1E-142 T 22-04-2016 YE0529 1270fb52ab5ee0f46e1e2aceb6420fae 325 Gene3D G3DSA:3.40.50.1360 71 324 2.9E-68 T 22-04-2016 YE3504 0494dd43f2ac23dbf6e8c09561f73d32 562 TIGRFAM TIGR02520 pilus_B_mal_scr: type IVB pilus formation outer membrane protein, R64 PilN family 61 560 3.5E-138 T 22-04-2016 IPR013359 Pilus formation type IVB, outer membrane PilN YE3504 0494dd43f2ac23dbf6e8c09561f73d32 562 Pfam PF07655 Secretin N-terminal domain 210 289 3.9E-15 T 22-04-2016 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 YE3504 0494dd43f2ac23dbf6e8c09561f73d32 562 Pfam PF00263 Bacterial type II and III secretion system protein 392 523 2.0E-9 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 YE3159 dd41203a8988a4da13a9349660328978 138 Gene3D G3DSA:1.10.940.10 3 136 3.4E-47 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 YE3159 dd41203a8988a4da13a9349660328978 138 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 6 132 2.4E-46 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 YE3159 dd41203a8988a4da13a9349660328978 138 PANTHER PTHR11078 1 138 5.0E-56 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 YE3159 dd41203a8988a4da13a9349660328978 138 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 4 135 23.881 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 YE3159 dd41203a8988a4da13a9349660328978 138 Pfam PF01029 NusB family 7 131 3.8E-36 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 YE3159 dd41203a8988a4da13a9349660328978 138 SUPERFAMILY SSF48013 3 135 1.57E-43 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 YE2746 1c628d8bd1db75c2d41ba952a54d5910 144 Pfam PF10662 Ethanolamine utilisation - propanediol utilisation 1 142 7.8E-55 T 22-04-2016 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 YE2746 1c628d8bd1db75c2d41ba952a54d5910 144 TIGRFAM TIGR02528 EutP: ethanolamine utilization protein, EutP 2 142 5.3E-51 T 22-04-2016 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 YE2746 1c628d8bd1db75c2d41ba952a54d5910 144 PANTHER PTHR40453 2 141 3.2E-26 T 22-04-2016 YE2746 1c628d8bd1db75c2d41ba952a54d5910 144 PANTHER PTHR40453:SF1 2 141 3.2E-26 T 22-04-2016 YE2746 1c628d8bd1db75c2d41ba952a54d5910 144 PIRSF PIRSF036409 1 144 2.8E-52 T 22-04-2016 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 YE2746 1c628d8bd1db75c2d41ba952a54d5910 144 SUPERFAMILY SSF52540 3 141 2.81E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2746 1c628d8bd1db75c2d41ba952a54d5910 144 Gene3D G3DSA:3.40.50.300 3 141 7.1E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2689 34de83d056dd0d6dcce3fc7987058377 161 Pfam PF05638 Type VI secretion system effector, Hcp 6 136 1.9E-40 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YE2689 34de83d056dd0d6dcce3fc7987058377 161 PANTHER PTHR36152:SF1 1 161 5.2E-88 T 22-04-2016 YE2689 34de83d056dd0d6dcce3fc7987058377 161 PANTHER PTHR36152 1 161 5.2E-88 T 22-04-2016 YE2689 34de83d056dd0d6dcce3fc7987058377 161 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 9 145 1.7E-20 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YE2689 34de83d056dd0d6dcce3fc7987058377 161 Gene3D G3DSA:2.30.110.20 1 160 1.4E-62 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YE2689 34de83d056dd0d6dcce3fc7987058377 161 SUPERFAMILY SSF141452 3 159 1.07E-51 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp YE2373 b57e73dea97e6a7c2f3b8b21224ce6df 89 Pfam PF03776 Septum formation topological specificity factor MinE 14 82 3.0E-24 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 YE2373 b57e73dea97e6a7c2f3b8b21224ce6df 89 SUPERFAMILY SSF55229 32 85 1.44E-17 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 YE2373 b57e73dea97e6a7c2f3b8b21224ce6df 89 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 83 3.0E-33 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 YE2373 b57e73dea97e6a7c2f3b8b21224ce6df 89 PANTHER PTHR33404 1 89 1.0E-37 T 22-04-2016 YE2373 b57e73dea97e6a7c2f3b8b21224ce6df 89 Gene3D G3DSA:3.30.1070.10 31 86 2.1E-24 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 YE2373 b57e73dea97e6a7c2f3b8b21224ce6df 89 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 86 18.604 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 YE3988 5bc69b8a8f58d57f99cb23032e91b92f 278 Pfam PF01694 Rhomboid family 132 271 1.6E-28 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 YE3988 5bc69b8a8f58d57f99cb23032e91b92f 278 PANTHER PTHR22936:SF30 1 272 4.7E-101 T 22-04-2016 YE3988 5bc69b8a8f58d57f99cb23032e91b92f 278 PANTHER PTHR22936 1 272 4.7E-101 T 22-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 YE3988 5bc69b8a8f58d57f99cb23032e91b92f 278 Gene3D G3DSA:1.20.1540.10 96 268 4.3E-35 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 YE3988 5bc69b8a8f58d57f99cb23032e91b92f 278 SUPERFAMILY SSF144091 94 271 8.37E-44 T 22-04-2016 YE3988 5bc69b8a8f58d57f99cb23032e91b92f 278 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 4 271 5.0E-122 T 22-04-2016 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 YE3988 5bc69b8a8f58d57f99cb23032e91b92f 278 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 84 1.0E-27 T 22-04-2016 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 YE3988 5bc69b8a8f58d57f99cb23032e91b92f 278 Hamap MF_01594 Rhomboid protease GlpG [glpG]. 1 277 51.767 T 22-04-2016 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 YE1154 e1c2248b4301817ed7959960c416c198 167 TIGRFAM TIGR00402 napF: ferredoxin-type protein NapF 6 159 4.0E-47 T 22-04-2016 IPR004496 Ferredoxin-type protein NapF GO:0005506|GO:0009055 YE1154 e1c2248b4301817ed7959960c416c198 167 Gene3D G3DSA:3.30.70.20 79 114 2.7E-5 T 22-04-2016 YE1154 e1c2248b4301817ed7959960c416c198 167 Pfam PF13187 4Fe-4S dicluster domain 39 84 5.2E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YE1154 e1c2248b4301817ed7959960c416c198 167 Pfam PF12838 4Fe-4S dicluster domain 110 157 1.2E-8 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YE1154 e1c2248b4301817ed7959960c416c198 167 Gene3D G3DSA:3.30.70.20 115 164 3.2E-11 T 22-04-2016 YE1154 e1c2248b4301817ed7959960c416c198 167 Gene3D G3DSA:3.30.70.20 38 78 6.0E-10 T 22-04-2016 YE1154 e1c2248b4301817ed7959960c416c198 167 PANTHER PTHR24960 3 160 3.0E-40 T 22-04-2016 YE1154 e1c2248b4301817ed7959960c416c198 167 PANTHER PTHR24960:SF46 3 160 3.0E-40 T 22-04-2016 YE1154 e1c2248b4301817ed7959960c416c198 167 SUPERFAMILY SSF54862 36 161 7.95E-20 T 22-04-2016 YE1154 e1c2248b4301817ed7959960c416c198 167 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 71 82 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YE1154 e1c2248b4301817ed7959960c416c198 167 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 39 50 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YE1154 e1c2248b4301817ed7959960c416c198 167 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 143 154 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YE2710 86a2382311a97340b486b9626a20c368 181 SUPERFAMILY SSF52540 1 181 1.33E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2710 86a2382311a97340b486b9626a20c368 181 Gene3D G3DSA:3.40.50.300 1 181 3.6E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2710 86a2382311a97340b486b9626a20c368 181 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 2 180 8.1E-61 T 22-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 YE2710 86a2382311a97340b486b9626a20c368 181 PANTHER PTHR34848 1 181 6.8E-71 T 22-04-2016 YE2710 86a2382311a97340b486b9626a20c368 181 PIRSF PIRSF006135 1 181 5.9E-56 T 22-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 YE0841 24475c187820904a37c91239f4c86d15 263 PANTHER PTHR38034 2 263 1.5E-106 T 22-04-2016 YE0841 24475c187820904a37c91239f4c86d15 263 Pfam PF01578 Cytochrome C assembly protein 37 261 3.8E-42 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 YE3401 3a7f97db6657f08e8f261c2588853cfc 220 PANTHER PTHR11934:SF11 1 220 3.0E-149 T 22-04-2016 YE3401 3a7f97db6657f08e8f261c2588853cfc 220 Gene3D G3DSA:3.30.70.260 137 196 2.2E-28 T 22-04-2016 YE3401 3a7f97db6657f08e8f261c2588853cfc 220 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 1.1E-58 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 YE3401 3a7f97db6657f08e8f261c2588853cfc 220 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 34.062 T 22-04-2016 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 YE3401 3a7f97db6657f08e8f261c2588853cfc 220 Gene3D G3DSA:3.40.50.1360 1 136 8.5E-60 T 22-04-2016 YE3401 3a7f97db6657f08e8f261c2588853cfc 220 PANTHER PTHR11934 1 220 3.0E-149 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 YE3401 3a7f97db6657f08e8f261c2588853cfc 220 SUPERFAMILY SSF100950 1 146 1.3E-47 T 22-04-2016 YE3401 3a7f97db6657f08e8f261c2588853cfc 220 SUPERFAMILY SSF75445 127 198 1.06E-23 T 22-04-2016 YE3401 3a7f97db6657f08e8f261c2588853cfc 220 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 215 4.5E-70 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 YE2395 80eb5da9fdabb6e0a18423f4876bae82 247 PANTHER PTHR12532 1 241 1.1E-118 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like YE2395 80eb5da9fdabb6e0a18423f4876bae82 247 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 35.727 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like YE2395 80eb5da9fdabb6e0a18423f4876bae82 247 Gene3D G3DSA:3.30.70.980 135 205 4.0E-25 T 22-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 YE2395 80eb5da9fdabb6e0a18423f4876bae82 247 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 237 5.4E-103 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like YE2395 80eb5da9fdabb6e0a18423f4876bae82 247 Pfam PF01709 Transcriptional regulator 5 236 6.7E-90 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like YE2395 80eb5da9fdabb6e0a18423f4876bae82 247 Gene3D G3DSA:3.30.1270.10 212 246 7.5E-42 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 YE2395 80eb5da9fdabb6e0a18423f4876bae82 247 Gene3D G3DSA:3.30.1270.10 82 134 7.5E-42 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 YE2395 80eb5da9fdabb6e0a18423f4876bae82 247 SUPERFAMILY SSF75625 3 245 1.31E-94 T 22-04-2016 IPR029072 YebC-like YE2395 80eb5da9fdabb6e0a18423f4876bae82 247 Gene3D G3DSA:1.10.10.200 1 80 1.3E-34 T 22-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like YE3740 59bae44fd6fb260a4d5ce88164b468cc 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 34.054 T 22-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid YE3740 59bae44fd6fb260a4d5ce88164b468cc 130 Gene3D G3DSA:3.30.230.10 4 130 4.6E-51 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YE3740 59bae44fd6fb260a4d5ce88164b468cc 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 22-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 YE3740 59bae44fd6fb260a4d5ce88164b468cc 130 PANTHER PTHR21569 1 130 2.6E-76 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 YE3740 59bae44fd6fb260a4d5ce88164b468cc 130 SUPERFAMILY SSF54211 5 130 3.3E-49 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YE3740 59bae44fd6fb260a4d5ce88164b468cc 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 2.5E-47 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 YE2494 4dbc04f9fbd9dde0e13ded16cb2332d3 430 Pfam PF02687 FtsX-like permease family 310 421 5.0E-22 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 YE2494 4dbc04f9fbd9dde0e13ded16cb2332d3 430 PANTHER PTHR30489 278 430 6.0E-132 T 22-04-2016 YE2494 4dbc04f9fbd9dde0e13ded16cb2332d3 430 PANTHER PTHR30489 1 259 6.0E-132 T 22-04-2016 YE2494 4dbc04f9fbd9dde0e13ded16cb2332d3 430 PANTHER PTHR30489:SF16 278 430 6.0E-132 T 22-04-2016 YE2494 4dbc04f9fbd9dde0e13ded16cb2332d3 430 PANTHER PTHR30489:SF16 1 259 6.0E-132 T 22-04-2016 YE3063 eb7cc5d025229103a523b3e13b76a3c5 159 PANTHER PTHR30411 1 158 2.9E-73 T 22-04-2016 YE3063 eb7cc5d025229103a523b3e13b76a3c5 159 Pfam PF04073 Aminoacyl-tRNA editing domain 31 146 6.2E-24 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 YE3063 eb7cc5d025229103a523b3e13b76a3c5 159 SUPERFAMILY SSF55826 2 155 1.83E-44 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 YE3063 eb7cc5d025229103a523b3e13b76a3c5 159 PANTHER PTHR30411:SF0 1 158 2.9E-73 T 22-04-2016 YE3063 eb7cc5d025229103a523b3e13b76a3c5 159 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 156 9.9E-55 T 22-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC YE3063 eb7cc5d025229103a523b3e13b76a3c5 159 PIRSF PIRSF006181 1 159 1.2E-55 T 22-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC YE3063 eb7cc5d025229103a523b3e13b76a3c5 159 Gene3D G3DSA:3.90.960.10 1 157 5.2E-60 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 YE0394 3f4b75464bdfc56f443a4f9c474a954f 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.3E-17 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0394 3f4b75464bdfc56f443a4f9c474a954f 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.3E-17 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0394 3f4b75464bdfc56f443a4f9c474a954f 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.3E-17 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0394 3f4b75464bdfc56f443a4f9c474a954f 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.3E-17 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0394 3f4b75464bdfc56f443a4f9c474a954f 75 Gene3D G3DSA:4.10.640.10 8 74 7.9E-32 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0394 3f4b75464bdfc56f443a4f9c474a954f 75 PANTHER PTHR13479 2 74 2.7E-34 T 22-04-2016 YE0394 3f4b75464bdfc56f443a4f9c474a954f 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 22-04-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0394 3f4b75464bdfc56f443a4f9c474a954f 75 Pfam PF01084 Ribosomal protein S18 19 68 4.2E-24 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0394 3f4b75464bdfc56f443a4f9c474a954f 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 20.759 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0394 3f4b75464bdfc56f443a4f9c474a954f 75 SUPERFAMILY SSF46911 3 74 1.07E-28 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0394 3f4b75464bdfc56f443a4f9c474a954f 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 2.3E-36 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0394 3f4b75464bdfc56f443a4f9c474a954f 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 71 1.0E-22 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3051 eb87151b1a600759552c812d4e97f8a5 174 SUPERFAMILY SSF52255 14 170 3.01E-65 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 YE3051 eb87151b1a600759552c812d4e97f8a5 174 SMART SM01001 13 164 4.8E-100 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 YE3051 eb87151b1a600759552c812d4e97f8a5 174 Gene3D G3DSA:3.40.50.7700 10 169 8.1E-74 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 YE3051 eb87151b1a600759552c812d4e97f8a5 174 Pfam PF00731 AIR carboxylase 14 162 1.2E-62 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 YE3051 eb87151b1a600759552c812d4e97f8a5 174 PIRSF PIRSF001338 10 173 1.2E-65 T 22-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 YE3051 eb87151b1a600759552c812d4e97f8a5 174 PANTHER PTHR23046:SF2 14 173 8.1E-89 T 22-04-2016 YE3051 eb87151b1a600759552c812d4e97f8a5 174 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 15 169 1.6E-64 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 YE3051 eb87151b1a600759552c812d4e97f8a5 174 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 15 168 31.984 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 YE3051 eb87151b1a600759552c812d4e97f8a5 174 PANTHER PTHR23046 14 173 8.1E-89 T 22-04-2016 YE2910 651c716c248cd7cd371cbd63c2026995 273 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 240 1.4E-22 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 YE2910 651c716c248cd7cd371cbd63c2026995 273 ProSitePatterns PS01229 Hypothetical cof family signature 2. 221 243 - T 22-04-2016 YE2910 651c716c248cd7cd371cbd63c2026995 273 PANTHER PTHR10000 1 273 2.9E-89 T 22-04-2016 YE2910 651c716c248cd7cd371cbd63c2026995 273 SUPERFAMILY SSF56784 1 271 2.56E-66 T 22-04-2016 IPR023214 HAD-like domain YE2910 651c716c248cd7cd371cbd63c2026995 273 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 267 2.9E-61 T 22-04-2016 IPR023214 HAD-like domain YE2910 651c716c248cd7cd371cbd63c2026995 273 PANTHER PTHR10000:SF8 1 273 2.9E-89 T 22-04-2016 YE2910 651c716c248cd7cd371cbd63c2026995 273 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 244 256 1.2E-5 T 22-04-2016 YE2910 651c716c248cd7cd371cbd63c2026995 273 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 221 240 1.2E-5 T 22-04-2016 YE2910 651c716c248cd7cd371cbd63c2026995 273 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 7 21 1.2E-5 T 22-04-2016 YE2910 651c716c248cd7cd371cbd63c2026995 273 Gene3D G3DSA:3.40.50.1000 1 73 3.5E-52 T 22-04-2016 IPR023214 HAD-like domain YE2910 651c716c248cd7cd371cbd63c2026995 273 Gene3D G3DSA:3.40.50.1000 176 272 3.5E-52 T 22-04-2016 IPR023214 HAD-like domain YE2910 651c716c248cd7cd371cbd63c2026995 273 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 267 5.3E-65 T 22-04-2016 IPR000150 Cof protein GO:0016787 YE2450 7e6f0812e9edfc36904050eab9e430ac 136 PANTHER PTHR30304:SF5 1 136 2.5E-72 T 22-04-2016 YE2450 7e6f0812e9edfc36904050eab9e430ac 136 Gene3D G3DSA:3.20.20.70 1 136 4.2E-45 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YE2450 7e6f0812e9edfc36904050eab9e430ac 136 SUPERFAMILY SSF51569 1 136 1.61E-38 T 22-04-2016 YE2450 7e6f0812e9edfc36904050eab9e430ac 136 PANTHER PTHR30304 1 136 2.5E-72 T 22-04-2016 YE2450 7e6f0812e9edfc36904050eab9e430ac 136 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 136 2.4E-39 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 YE3216 4768d50637e542b16d0517c4cb8ac0be 198 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 198 29.601 T 22-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 YE3216 4768d50637e542b16d0517c4cb8ac0be 198 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 197 1.3E-104 T 22-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 YE3216 4768d50637e542b16d0517c4cb8ac0be 198 PIRSF PIRSF006102 1 198 7.3E-65 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 YE3216 4768d50637e542b16d0517c4cb8ac0be 198 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 196 4.9E-59 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 YE3216 4768d50637e542b16d0517c4cb8ac0be 198 PANTHER PTHR30335 2 198 1.6E-145 T 22-04-2016 YE3216 4768d50637e542b16d0517c4cb8ac0be 198 PANTHER PTHR30335:SF1 2 198 1.6E-145 T 22-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 YE1113 1d095652484c061a6bdf8ead844d0054 226 PRINTS PR00969 Pili chaperone signature 123 138 4.2E-35 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YE1113 1d095652484c061a6bdf8ead844d0054 226 PRINTS PR00969 Pili chaperone signature 99 116 4.2E-35 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YE1113 1d095652484c061a6bdf8ead844d0054 226 PRINTS PR00969 Pili chaperone signature 158 173 4.2E-35 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YE1113 1d095652484c061a6bdf8ead844d0054 226 PRINTS PR00969 Pili chaperone signature 71 92 4.2E-35 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YE1113 1d095652484c061a6bdf8ead844d0054 226 PRINTS PR00969 Pili chaperone signature 24 33 4.2E-35 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YE1113 1d095652484c061a6bdf8ead844d0054 226 PANTHER PTHR30251 4 226 7.6E-85 T 22-04-2016 YE1113 1d095652484c061a6bdf8ead844d0054 226 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 98 115 - T 22-04-2016 IPR018046 Pili assembly chaperone, conserved site YE1113 1d095652484c061a6bdf8ead844d0054 226 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 23 141 1.2E-43 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 YE1113 1d095652484c061a6bdf8ead844d0054 226 Gene3D G3DSA:2.60.40.360 23 142 2.7E-47 T 22-04-2016 IPR008962 PapD-like YE1113 1d095652484c061a6bdf8ead844d0054 226 SUPERFAMILY SSF49354 18 141 1.73E-44 T 22-04-2016 IPR008962 PapD-like YE1113 1d095652484c061a6bdf8ead844d0054 226 Gene3D G3DSA:2.60.40.1070 144 222 7.4E-27 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YE1113 1d095652484c061a6bdf8ead844d0054 226 PANTHER PTHR30251:SF11 4 226 7.6E-85 T 22-04-2016 YE1113 1d095652484c061a6bdf8ead844d0054 226 SUPERFAMILY SSF49584 143 222 1.7E-23 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YE1113 1d095652484c061a6bdf8ead844d0054 226 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 163 219 3.9E-16 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YE0709 4f80beb85780feb919c5ec63ade886df 264 Pfam PF02675 S-adenosylmethionine decarboxylase 33 169 1.7E-29 T 22-04-2016 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 YE0709 4f80beb85780feb919c5ec63ade886df 264 SUPERFAMILY SSF56276 112 173 4.32E-23 T 22-04-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 YE0709 4f80beb85780feb919c5ec63ade886df 264 SUPERFAMILY SSF56276 43 84 4.32E-23 T 22-04-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 YE0709 4f80beb85780feb919c5ec63ade886df 264 PANTHER PTHR33866:SF1 15 84 1.5E-174 T 22-04-2016 YE0709 4f80beb85780feb919c5ec63ade886df 264 PANTHER PTHR33866 112 263 1.5E-174 T 22-04-2016 YE0709 4f80beb85780feb919c5ec63ade886df 264 PANTHER PTHR33866 15 84 1.5E-174 T 22-04-2016 YE0709 4f80beb85780feb919c5ec63ade886df 264 PIRSF PIRSF001356 1 263 7.7E-158 T 22-04-2016 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 YE0709 4f80beb85780feb919c5ec63ade886df 264 TIGRFAM TIGR03331 SAM_DCase_Eco: S-adenosylmethionine decarboxylase proenzyme 3 261 6.8E-149 T 22-04-2016 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 YE0709 4f80beb85780feb919c5ec63ade886df 264 PANTHER PTHR33866:SF1 112 263 1.5E-174 T 22-04-2016 YE0709 4f80beb85780feb919c5ec63ade886df 264 Gene3D G3DSA:3.60.90.10 33 186 2.2E-46 T 22-04-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 YE0709 4f80beb85780feb919c5ec63ade886df 264 Hamap MF_00465 S-adenosylmethionine decarboxylase proenzyme [speD]. 1 264 178.362 T 22-04-2016 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 YE0194 47b73ea01013d115e3cae103cfaf8a8b 303 PANTHER PTHR30349:SF17 3 300 3.4E-171 T 22-04-2016 YE0194 47b73ea01013d115e3cae103cfaf8a8b 303 PANTHER PTHR30349 3 300 3.4E-171 T 22-04-2016 YE0194 47b73ea01013d115e3cae103cfaf8a8b 303 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 8 298 36.798 T 22-04-2016 IPR023009 Tyrosine recombinase XerC/XerD YE0194 47b73ea01013d115e3cae103cfaf8a8b 303 Gene3D G3DSA:1.10.150.130 10 105 4.5E-25 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal YE0194 47b73ea01013d115e3cae103cfaf8a8b 303 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 13 300 2.4E-109 T 22-04-2016 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 YE0194 47b73ea01013d115e3cae103cfaf8a8b 303 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 12 95 6.9E-22 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 YE0194 47b73ea01013d115e3cae103cfaf8a8b 303 Gene3D G3DSA:1.10.443.10 119 291 1.2E-53 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 YE0194 47b73ea01013d115e3cae103cfaf8a8b 303 SUPERFAMILY SSF47823 10 102 4.9E-11 T 22-04-2016 IPR010998 Integrase, Lambda-type, N-terminal YE0194 47b73ea01013d115e3cae103cfaf8a8b 303 Pfam PF00589 Phage integrase family 117 284 1.7E-51 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 YE0194 47b73ea01013d115e3cae103cfaf8a8b 303 SUPERFAMILY SSF56349 113 296 9.42E-54 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YE3124 73ef908c36b4fd54fef34899f392e1c0 346 Gene3D G3DSA:3.40.50.1100 141 331 4.2E-39 T 22-04-2016 YE3124 73ef908c36b4fd54fef34899f392e1c0 346 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 23 313 5.4E-43 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YE3124 73ef908c36b4fd54fef34899f392e1c0 346 PANTHER PTHR10314:SF126 1 345 2.7E-207 T 22-04-2016 YE3124 73ef908c36b4fd54fef34899f392e1c0 346 PANTHER PTHR10314 1 345 2.7E-207 T 22-04-2016 YE3124 73ef908c36b4fd54fef34899f392e1c0 346 Gene3D G3DSA:3.40.50.1100 46 140 1.1E-21 T 22-04-2016 YE3124 73ef908c36b4fd54fef34899f392e1c0 346 SUPERFAMILY SSF53686 10 331 1.83E-68 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YE2610 822347e9e4158b27cf2788d30c1972f0 267 SUPERFAMILY SSF55486 33 245 1.03E-40 T 22-04-2016 YE2610 822347e9e4158b27cf2788d30c1972f0 267 Hamap MF_01593 Protein MtfA [mtfA]. 1 265 65.182 T 22-04-2016 IPR010384 MtfA family YE2610 822347e9e4158b27cf2788d30c1972f0 267 Gene3D G3DSA:3.40.390.10 27 244 1.1E-24 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 YE2610 822347e9e4158b27cf2788d30c1972f0 267 PANTHER PTHR30164 1 266 2.5E-109 T 22-04-2016 YE2610 822347e9e4158b27cf2788d30c1972f0 267 Pfam PF06167 Glucose-regulated metallo-peptidase M90 11 243 7.7E-63 T 22-04-2016 IPR010384 MtfA family YE0768 b6703e252d886583c6658620ad2bbed9 107 Pfam PF04977 Septum formation initiator 11 89 1.9E-27 T 22-04-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 YE0768 b6703e252d886583c6658620ad2bbed9 107 PANTHER PTHR37485 2 106 4.6E-53 T 22-04-2016 YE0768 b6703e252d886583c6658620ad2bbed9 107 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 34.552 T 22-04-2016 IPR023081 Cell division protein FtsB YE0768 b6703e252d886583c6658620ad2bbed9 107 PANTHER PTHR37485:SF1 2 106 4.6E-53 T 22-04-2016 YE3425 340d02029017206b87e5c923024af4cc 235 SUPERFAMILY SSF54060 25 230 1.15E-85 T 22-04-2016 YE3425 340d02029017206b87e5c923024af4cc 235 PANTHER PTHR33607 7 231 3.9E-68 T 22-04-2016 YE3425 340d02029017206b87e5c923024af4cc 235 Pfam PF04231 Endonuclease I 42 229 7.5E-41 T 22-04-2016 IPR007346 Endonuclease I GO:0004518 YE0403 6e9985f4a8d337442325903fc73a5594 443 SUPERFAMILY SSF56176 344 429 3.0E-22 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 YE0403 6e9985f4a8d337442325903fc73a5594 443 Gene3D G3DSA:3.10.580.10 198 337 2.7E-13 T 22-04-2016 YE0403 6e9985f4a8d337442325903fc73a5594 443 SUPERFAMILY SSF54631 200 335 1.08E-20 T 22-04-2016 YE0403 6e9985f4a8d337442325903fc73a5594 443 Pfam PF03471 Transporter associated domain 347 424 2.5E-20 T 22-04-2016 IPR005170 Transporter-associated domain YE0403 6e9985f4a8d337442325903fc73a5594 443 Gene3D G3DSA:3.30.465.10 341 424 2.1E-27 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 YE0403 6e9985f4a8d337442325903fc73a5594 443 PANTHER PTHR22777:SF16 1 440 0.0 T 22-04-2016 YE0403 6e9985f4a8d337442325903fc73a5594 443 Pfam PF01595 Domain of unknown function DUF21 6 197 9.8E-38 T 22-04-2016 IPR002550 Domain of unknown function DUF21 YE0403 6e9985f4a8d337442325903fc73a5594 443 Pfam PF00571 CBS domain 287 333 0.0028 T 22-04-2016 IPR000644 CBS domain YE0403 6e9985f4a8d337442325903fc73a5594 443 SMART SM01091 346 426 6.9E-27 T 22-04-2016 IPR005170 Transporter-associated domain YE0403 6e9985f4a8d337442325903fc73a5594 443 PANTHER PTHR22777 1 440 0.0 T 22-04-2016 YE1881 0b67a46f3ab285609061d75654145715 232 PANTHER PTHR38105 1 232 1.9E-129 T 22-04-2016 YE1881 0b67a46f3ab285609061d75654145715 232 Gene3D G3DSA:2.40.230.30 22 232 2.1E-69 T 22-04-2016 YE1881 0b67a46f3ab285609061d75654145715 232 SUPERFAMILY SSF56935 50 232 2.9E-14 T 22-04-2016 YE1881 0b67a46f3ab285609061d75654145715 232 PANTHER PTHR38105:SF1 1 232 1.9E-129 T 22-04-2016 YE1881 0b67a46f3ab285609061d75654145715 232 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 15 232 8.3E-77 T 22-04-2016 IPR009331 Oligogalacturonate-specific porin YE3319 2dd9abea34858048c20950eeea8dac07 748 Pfam PF05524 PEP-utilising enzyme, N-terminal 174 294 4.1E-24 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 YE3319 2dd9abea34858048c20950eeea8dac07 748 SUPERFAMILY SSF51621 420 715 3.93E-94 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YE3319 2dd9abea34858048c20950eeea8dac07 748 PANTHER PTHR22931:SF23 1 716 0.0 T 22-04-2016 YE3319 2dd9abea34858048c20950eeea8dac07 748 Gene3D G3DSA:3.30.450.40 1 159 4.9E-47 T 22-04-2016 IPR029016 GAF domain-like YE3319 2dd9abea34858048c20950eeea8dac07 748 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 613 631 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 YE3319 2dd9abea34858048c20950eeea8dac07 748 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 351 362 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 YE3319 2dd9abea34858048c20950eeea8dac07 748 Gene3D G3DSA:1.10.274.10 197 300 5.4E-35 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 YE3319 2dd9abea34858048c20950eeea8dac07 748 SUPERFAMILY SSF55781 2 159 6.98E-31 T 22-04-2016 IPR029016 GAF domain-like YE3319 2dd9abea34858048c20950eeea8dac07 748 SUPERFAMILY SSF52009 293 413 1.83E-26 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 YE3319 2dd9abea34858048c20950eeea8dac07 748 SUPERFAMILY SSF47831 200 309 9.81E-27 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 YE3319 2dd9abea34858048c20950eeea8dac07 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 459 478 7.6E-25 T 22-04-2016 YE3319 2dd9abea34858048c20950eeea8dac07 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 666 678 7.6E-25 T 22-04-2016 YE3319 2dd9abea34858048c20950eeea8dac07 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 630 645 7.6E-25 T 22-04-2016 YE3319 2dd9abea34858048c20950eeea8dac07 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 613 628 7.6E-25 T 22-04-2016 YE3319 2dd9abea34858048c20950eeea8dac07 748 Pfam PF00391 PEP-utilising enzyme, mobile domain 320 391 5.3E-16 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 YE3319 2dd9abea34858048c20950eeea8dac07 748 Gene3D G3DSA:3.20.20.60 420 736 9.8E-97 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YE3319 2dd9abea34858048c20950eeea8dac07 748 Gene3D G3DSA:3.50.30.10 301 415 6.2E-31 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 YE3319 2dd9abea34858048c20950eeea8dac07 748 PANTHER PTHR22931 1 716 0.0 T 22-04-2016 YE3319 2dd9abea34858048c20950eeea8dac07 748 SMART SM00065 17 164 2.6E-27 T 22-04-2016 IPR003018 GAF domain GO:0005515 YE3319 2dd9abea34858048c20950eeea8dac07 748 Pfam PF01590 GAF domain 18 151 3.5E-15 T 22-04-2016 IPR003018 GAF domain GO:0005515 YE3319 2dd9abea34858048c20950eeea8dac07 748 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 176 730 2.0E-131 T 22-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 YE3319 2dd9abea34858048c20950eeea8dac07 748 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 419 707 7.0E-102 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 YE2815 d0ede557e892e35321954ef6e467c24a 330 SUPERFAMILY SSF53822 24 329 4.12E-85 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YE2815 d0ede557e892e35321954ef6e467c24a 330 PANTHER PTHR30036:SF2 3 330 1.0E-152 T 22-04-2016 YE2815 d0ede557e892e35321954ef6e467c24a 330 Pfam PF13407 Periplasmic binding protein domain 27 298 6.8E-65 T 22-04-2016 IPR025997 Periplasmic binding protein YE2815 d0ede557e892e35321954ef6e467c24a 330 Gene3D G3DSA:3.40.50.2300 143 292 4.4E-55 T 22-04-2016 YE2815 d0ede557e892e35321954ef6e467c24a 330 Gene3D G3DSA:3.40.50.2300 26 142 1.4E-27 T 22-04-2016 YE2815 d0ede557e892e35321954ef6e467c24a 330 PANTHER PTHR30036 3 330 1.0E-152 T 22-04-2016 YE0201 357b84b6173c764a71bd420c6502bd80 296 SUPERFAMILY SSF103481 188 285 1.18E-6 T 22-04-2016 YE0201 357b84b6173c764a71bd420c6502bd80 296 SUPERFAMILY SSF103481 42 145 2.48E-15 T 22-04-2016 YE0201 357b84b6173c764a71bd420c6502bd80 296 TIGRFAM TIGR00688 rarD: protein RarD 8 261 1.5E-98 T 22-04-2016 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 YE0201 357b84b6173c764a71bd420c6502bd80 296 PANTHER PTHR22911:SF41 1 295 1.7E-157 T 22-04-2016 YE0201 357b84b6173c764a71bd420c6502bd80 296 Pfam PF00892 EamA-like transporter family 9 142 4.3E-17 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YE0201 357b84b6173c764a71bd420c6502bd80 296 PANTHER PTHR22911 1 295 1.7E-157 T 22-04-2016 YE1381 f2903895a8dd4561f109041bec10c866 169 SUPERFAMILY SSF56925 34 168 3.61E-11 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YE1381 f2903895a8dd4561f109041bec10c866 169 Pfam PF07437 YfaZ precursor 1 169 2.5E-81 T 22-04-2016 IPR009998 YfaZ YE1381 f2903895a8dd4561f109041bec10c866 169 Gene3D G3DSA:2.40.160.10 14 107 5.2E-5 T 22-04-2016 IPR023614 Porin domain YE3952 0d3756de69c59e0959424f2119fe988e 78 Hamap MF_00690 UPF0270 protein YheU [yheU]. 1 70 24.662 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 YE3952 0d3756de69c59e0959424f2119fe988e 78 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 67 2.4E-34 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 YE3952 0d3756de69c59e0959424f2119fe988e 78 PIRSF PIRSF006169 1 76 4.4E-37 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 YE3952 0d3756de69c59e0959424f2119fe988e 78 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 67 5.0E-27 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 YE3952 0d3756de69c59e0959424f2119fe988e 78 SUPERFAMILY SSF118001 1 71 8.37E-29 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 YE3952 0d3756de69c59e0959424f2119fe988e 78 Gene3D G3DSA:1.10.10.610 1 72 1.3E-36 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 YE3762 65b26e51c57250547c0ae110e53bef17 283 PANTHER PTHR30448 1 283 1.2E-157 T 22-04-2016 YE3762 65b26e51c57250547c0ae110e53bef17 283 Pfam PF03668 P-loop ATPase protein family 1 282 2.2E-144 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 YE3762 65b26e51c57250547c0ae110e53bef17 283 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 281 40.967 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 YE3762 65b26e51c57250547c0ae110e53bef17 283 SUPERFAMILY SSF52540 2 151 1.68E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3762 65b26e51c57250547c0ae110e53bef17 283 Gene3D G3DSA:3.40.50.300 2 150 5.5E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3762 65b26e51c57250547c0ae110e53bef17 283 PANTHER PTHR30448:SF0 1 283 1.2E-157 T 22-04-2016 YE3762 65b26e51c57250547c0ae110e53bef17 283 PIRSF PIRSF005052 1 283 8.4E-114 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 YE0345 b7f0ea77cf37ad9f4064315258bfa045 52 Gene3D G3DSA:1.10.443.10 2 46 1.1E-4 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 YE2010 cc65156863416d8c1613072ad564f318 398 PANTHER PTHR11751:SF361 11 398 3.8E-217 T 22-04-2016 YE2010 cc65156863416d8c1613072ad564f318 398 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 10 390 3.3E-114 T 22-04-2016 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 YE2010 cc65156863416d8c1613072ad564f318 398 Gene3D G3DSA:3.90.1150.10 258 392 1.4E-40 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YE2010 cc65156863416d8c1613072ad564f318 398 Pfam PF00155 Aminotransferase class I and II 36 384 2.2E-51 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YE2010 cc65156863416d8c1613072ad564f318 398 PANTHER PTHR11751 11 398 3.8E-217 T 22-04-2016 YE2010 cc65156863416d8c1613072ad564f318 398 Gene3D G3DSA:3.40.640.10 50 257 5.0E-44 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YE2010 cc65156863416d8c1613072ad564f318 398 SUPERFAMILY SSF53383 7 390 7.45E-88 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YE2838 4585dcb9a796ed719c3b5c6c4a43be24 163 Gene3D G3DSA:3.40.630.30 1 160 7.6E-34 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE2838 4585dcb9a796ed719c3b5c6c4a43be24 163 PANTHER PTHR23091:SF210 1 163 6.5E-50 T 22-04-2016 YE2838 4585dcb9a796ed719c3b5c6c4a43be24 163 SUPERFAMILY SSF55729 1 160 9.09E-29 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE2838 4585dcb9a796ed719c3b5c6c4a43be24 163 PANTHER PTHR23091 1 163 6.5E-50 T 22-04-2016 YE2838 4585dcb9a796ed719c3b5c6c4a43be24 163 Pfam PF00583 Acetyltransferase (GNAT) family 54 134 2.9E-10 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YE1045 d40c2292e20a623c0ec16d21c10caed9 299 Pfam PF14502 Helix-turn-helix domain 25 71 1.6E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1045 d40c2292e20a623c0ec16d21c10caed9 299 Gene3D G3DSA:3.40.190.10 75 208 5.3E-60 T 22-04-2016 YE1045 d40c2292e20a623c0ec16d21c10caed9 299 SUPERFAMILY SSF53850 74 299 1.02E-83 T 22-04-2016 YE1045 d40c2292e20a623c0ec16d21c10caed9 299 Pfam PF14503 YhfZ C-terminal domain 76 299 1.8E-82 T 22-04-2016 IPR032791 Uncharacterised protein YhfZ, C-terminal domain YE1045 d40c2292e20a623c0ec16d21c10caed9 299 Gene3D G3DSA:1.10.10.10 25 74 4.9E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1045 d40c2292e20a623c0ec16d21c10caed9 299 SUPERFAMILY SSF46785 18 71 8.65E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3773 0a33734d8dc1fe72bd1fc5795c80c682 553 SUPERFAMILY SSF51011 475 551 5.54E-17 T 22-04-2016 YE3773 0a33734d8dc1fe72bd1fc5795c80c682 553 Gene3D G3DSA:2.60.40.1180 476 550 1.4E-20 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta YE3773 0a33734d8dc1fe72bd1fc5795c80c682 553 PANTHER PTHR10357:SF142 1 386 2.2E-248 T 22-04-2016 YE3773 0a33734d8dc1fe72bd1fc5795c80c682 553 PANTHER PTHR10357:SF142 451 551 2.2E-248 T 22-04-2016 YE3773 0a33734d8dc1fe72bd1fc5795c80c682 553 PANTHER PTHR10357:SF142 407 419 2.2E-248 T 22-04-2016 YE3773 0a33734d8dc1fe72bd1fc5795c80c682 553 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 7 550 3.9E-251 T 22-04-2016 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 YE3773 0a33734d8dc1fe72bd1fc5795c80c682 553 SMART SM00642 15 414 3.1E-153 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 YE3773 0a33734d8dc1fe72bd1fc5795c80c682 553 SUPERFAMILY SSF51445 5 472 9.64E-153 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YE3773 0a33734d8dc1fe72bd1fc5795c80c682 553 PANTHER PTHR10357 1 386 2.2E-248 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 YE3773 0a33734d8dc1fe72bd1fc5795c80c682 553 PANTHER PTHR10357 451 551 2.2E-248 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 YE3773 0a33734d8dc1fe72bd1fc5795c80c682 553 PANTHER PTHR10357 407 419 2.2E-248 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 YE3773 0a33734d8dc1fe72bd1fc5795c80c682 553 Gene3D G3DSA:3.20.20.80 176 473 1.0E-122 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 YE3773 0a33734d8dc1fe72bd1fc5795c80c682 553 Gene3D G3DSA:3.20.20.80 5 106 1.0E-122 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 YE3773 0a33734d8dc1fe72bd1fc5795c80c682 553 Gene3D G3DSA:3.90.400.10 107 175 1.1E-28 T 22-04-2016 YE3773 0a33734d8dc1fe72bd1fc5795c80c682 553 Pfam PF00128 Alpha amylase, catalytic domain 30 372 2.8E-123 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 YE3773 0a33734d8dc1fe72bd1fc5795c80c682 553 Pfam PF11941 Domain of unknown function (DUF3459) 459 543 2.8E-6 T 22-04-2016 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) YE3983 83ab1c3a970846eba180fc04df1323c2 225 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 190 3.3E-13 T 22-04-2016 IPR023214 HAD-like domain YE3983 83ab1c3a970846eba180fc04df1323c2 225 PANTHER PTHR18901:SF7 1 224 1.6E-134 T 22-04-2016 YE3983 83ab1c3a970846eba180fc04df1323c2 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 136 152 5.3E-9 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YE3983 83ab1c3a970846eba180fc04df1323c2 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 105 118 5.3E-9 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YE3983 83ab1c3a970846eba180fc04df1323c2 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 10 21 5.3E-9 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YE3983 83ab1c3a970846eba180fc04df1323c2 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 154 174 5.3E-9 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YE3983 83ab1c3a970846eba180fc04df1323c2 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 181 194 5.3E-9 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YE3983 83ab1c3a970846eba180fc04df1323c2 225 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 13 191 2.9E-16 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YE3983 83ab1c3a970846eba180fc04df1323c2 225 PANTHER PTHR18901 1 224 1.6E-134 T 22-04-2016 YE3983 83ab1c3a970846eba180fc04df1323c2 225 Gene3D G3DSA:3.40.50.1000 10 217 4.7E-29 T 22-04-2016 IPR023214 HAD-like domain YE3983 83ab1c3a970846eba180fc04df1323c2 225 SUPERFAMILY SSF56784 6 217 3.45E-43 T 22-04-2016 IPR023214 HAD-like domain YE0774 b8fd1765d26a1de03f9c4be120d95f1a 327 Gene3D G3DSA:3.10.350.10 77 121 3.5E-11 T 22-04-2016 IPR018392 LysM domain YE0774 b8fd1765d26a1de03f9c4be120d95f1a 327 Pfam PF01551 Peptidase family M23 227 320 3.8E-31 T 22-04-2016 IPR016047 Peptidase M23 YE0774 b8fd1765d26a1de03f9c4be120d95f1a 327 PANTHER PTHR21666 198 325 2.0E-60 T 22-04-2016 YE0774 b8fd1765d26a1de03f9c4be120d95f1a 327 SUPERFAMILY SSF51261 78 324 4.5E-50 T 22-04-2016 IPR011055 Duplicated hybrid motif YE0774 b8fd1765d26a1de03f9c4be120d95f1a 327 SMART SM00257 78 122 5.4E-10 T 22-04-2016 IPR018392 LysM domain YE0774 b8fd1765d26a1de03f9c4be120d95f1a 327 Pfam PF01476 LysM domain 79 120 6.2E-8 T 22-04-2016 IPR018392 LysM domain YE0774 b8fd1765d26a1de03f9c4be120d95f1a 327 Gene3D G3DSA:2.70.70.10 204 325 4.6E-40 T 22-04-2016 YE0774 b8fd1765d26a1de03f9c4be120d95f1a 327 PANTHER PTHR21666:SF222 198 325 2.0E-60 T 22-04-2016 YE0409 e1e88619e823507ce2a45e65a2d271cf 526 SUPERFAMILY SSF58104 236 522 1.7E-71 T 22-04-2016 YE0409 e1e88619e823507ce2a45e65a2d271cf 526 SMART SM00283 269 516 9.8E-88 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 YE0409 e1e88619e823507ce2a45e65a2d271cf 526 PANTHER PTHR32089:SF63 135 519 7.4E-139 T 22-04-2016 YE0409 e1e88619e823507ce2a45e65a2d271cf 526 PANTHER PTHR32089 135 519 7.4E-139 T 22-04-2016 YE0409 e1e88619e823507ce2a45e65a2d271cf 526 Pfam PF00672 HAMP domain 196 264 5.6E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YE0409 e1e88619e823507ce2a45e65a2d271cf 526 Gene3D G3DSA:1.10.287.950 284 488 8.4E-60 T 22-04-2016 YE0409 e1e88619e823507ce2a45e65a2d271cf 526 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 323 515 4.0E-62 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 YE0409 e1e88619e823507ce2a45e65a2d271cf 526 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 2.1E-54 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE0409 e1e88619e823507ce2a45e65a2d271cf 526 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 2.1E-54 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE0409 e1e88619e823507ce2a45e65a2d271cf 526 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 2.1E-54 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE0409 e1e88619e823507ce2a45e65a2d271cf 526 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 2.1E-54 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE0409 e1e88619e823507ce2a45e65a2d271cf 526 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 394 2.1E-54 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE0409 e1e88619e823507ce2a45e65a2d271cf 526 Pfam PF02203 Tar ligand binding domain homologue 1 174 1.1E-19 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 YE0409 e1e88619e823507ce2a45e65a2d271cf 526 SMART SM00304 216 268 3.7E-5 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YE0409 e1e88619e823507ce2a45e65a2d271cf 526 SUPERFAMILY SSF47170 30 173 2.62E-9 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 YE0592 dcfe8f19021db18a814c7675253c9e0b 215 SMART SM00855 3 157 6.7E-22 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 YE0592 dcfe8f19021db18a814c7675253c9e0b 215 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 194 1.0E-57 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 YE0592 dcfe8f19021db18a814c7675253c9e0b 215 SUPERFAMILY SSF53254 1 208 7.86E-57 T 22-04-2016 IPR029033 Histidine phosphatase superfamily YE0592 dcfe8f19021db18a814c7675253c9e0b 215 Hamap MF_01040 Probable phosphoglycerate mutase GpmB [gpmB]. 1 215 50.923 T 22-04-2016 IPR023086 Phosphoglycerate mutase, GpmB, probable GO:0004619|GO:0006096 UniPathway: UPA00109 YE0592 dcfe8f19021db18a814c7675253c9e0b 215 Gene3D G3DSA:3.40.50.1240 2 208 7.0E-62 T 22-04-2016 IPR029033 Histidine phosphatase superfamily YE0592 dcfe8f19021db18a814c7675253c9e0b 215 PANTHER PTHR23029:SF53 1 215 3.6E-151 T 22-04-2016 YE0592 dcfe8f19021db18a814c7675253c9e0b 215 PANTHER PTHR23029 1 215 3.6E-151 T 22-04-2016 YE0592 dcfe8f19021db18a814c7675253c9e0b 215 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 22-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 YE0730 f905e41756d5e3732f53a8911bd7f9d5 264 Gene3D G3DSA:3.40.50.300 5 239 1.5E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0730 f905e41756d5e3732f53a8911bd7f9d5 264 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE0730 f905e41756d5e3732f53a8911bd7f9d5 264 SUPERFAMILY SSF52540 11 237 1.2E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0730 f905e41756d5e3732f53a8911bd7f9d5 264 Pfam PF00005 ABC transporter 26 175 6.7E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE0730 f905e41756d5e3732f53a8911bd7f9d5 264 PANTHER PTHR24220:SF266 12 259 3.4E-139 T 22-04-2016 YE0730 f905e41756d5e3732f53a8911bd7f9d5 264 PANTHER PTHR24220 12 259 3.4E-139 T 22-04-2016 YE0730 f905e41756d5e3732f53a8911bd7f9d5 264 SMART SM00382 35 223 9.3E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain YE2065 74a1c91888829a7f3aaaf76cba0859f3 337 Pfam PF14486 Domain of unknown function (DUF4432) 34 335 1.4E-14 T 22-04-2016 IPR027839 Protein of unknown function DUF4432 YE2065 74a1c91888829a7f3aaaf76cba0859f3 337 SUPERFAMILY SSF74650 37 334 8.79E-6 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 YE0331 928d9bba003fdd4fcbf2b4df7434cd44 687 PANTHER PTHR32552 14 687 0.0 T 22-04-2016 YE0331 928d9bba003fdd4fcbf2b4df7434cd44 687 Gene3D G3DSA:2.40.170.20 162 687 4.4E-73 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YE0331 928d9bba003fdd4fcbf2b4df7434cd44 687 PANTHER PTHR32552:SF22 14 687 0.0 T 22-04-2016 YE0331 928d9bba003fdd4fcbf2b4df7434cd44 687 Pfam PF00593 TonB dependent receptor 427 686 7.9E-28 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YE0331 928d9bba003fdd4fcbf2b4df7434cd44 687 SUPERFAMILY SSF56935 44 687 1.77E-98 T 22-04-2016 YE0331 928d9bba003fdd4fcbf2b4df7434cd44 687 Gene3D G3DSA:2.170.130.10 44 161 2.8E-36 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YE0331 928d9bba003fdd4fcbf2b4df7434cd44 687 Pfam PF07715 TonB-dependent Receptor Plug Domain 59 161 7.1E-24 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YE0331 928d9bba003fdd4fcbf2b4df7434cd44 687 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 44 687 6.1E-186 T 22-04-2016 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 YE0331 928d9bba003fdd4fcbf2b4df7434cd44 687 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 51 - T 22-04-2016 IPR010916 TonB box, conserved site YE0331 928d9bba003fdd4fcbf2b4df7434cd44 687 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 44 687 6.4E-149 T 22-04-2016 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 YE3304 3629e5de0e2fcd998bd50dbbef788f6e 146 Pfam PF02657 Fe-S metabolism associated domain 19 138 7.2E-39 T 22-04-2016 IPR003808 Fe-S metabolism associated domain, SufE-like UniPathway: UPA00266 YE3304 3629e5de0e2fcd998bd50dbbef788f6e 146 TIGRFAM TIGR03391 FeS_syn_CsdE: cysteine desulfurase, sulfur acceptor subunit CsdE 3 141 1.4E-76 T 22-04-2016 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE YE3304 3629e5de0e2fcd998bd50dbbef788f6e 146 PANTHER PTHR12735 2 146 1.4E-58 T 22-04-2016 YE3304 3629e5de0e2fcd998bd50dbbef788f6e 146 Gene3D G3DSA:3.90.1010.10 2 145 2.0E-49 T 22-04-2016 YE3304 3629e5de0e2fcd998bd50dbbef788f6e 146 PANTHER PTHR12735:SF11 2 146 1.4E-58 T 22-04-2016 YE3304 3629e5de0e2fcd998bd50dbbef788f6e 146 SUPERFAMILY SSF82649 3 145 4.19E-45 T 22-04-2016 YE4201 193bd484b5e2f0fb2f4d708a92f23f5b 346 Pfam PF12849 PBP superfamily domain 23 306 2.2E-60 T 22-04-2016 IPR024370 PBP domain YE4201 193bd484b5e2f0fb2f4d708a92f23f5b 346 SUPERFAMILY SSF53850 28 339 1.68E-94 T 22-04-2016 YE4201 193bd484b5e2f0fb2f4d708a92f23f5b 346 PIRSF PIRSF002756 1 338 3.7E-105 T 22-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 YE4201 193bd484b5e2f0fb2f4d708a92f23f5b 346 Gene3D G3DSA:3.40.190.10 27 177 4.0E-55 T 22-04-2016 YE4201 193bd484b5e2f0fb2f4d708a92f23f5b 346 Gene3D G3DSA:3.40.190.10 181 338 2.8E-36 T 22-04-2016 YE4201 193bd484b5e2f0fb2f4d708a92f23f5b 346 PANTHER PTHR30570:SF0 1 340 1.1E-133 T 22-04-2016 YE4201 193bd484b5e2f0fb2f4d708a92f23f5b 346 PANTHER PTHR30570 1 340 1.1E-133 T 22-04-2016 YE4201 193bd484b5e2f0fb2f4d708a92f23f5b 346 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 29 335 4.5E-127 T 22-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 YE2078 442c7a0d8e528f71f7f311be88a1de7d 508 SUPERFAMILY SSF51735 137 317 1.09E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2078 442c7a0d8e528f71f7f311be88a1de7d 508 SUPERFAMILY SSF52283 1 168 1.02E-57 T 22-04-2016 YE2078 442c7a0d8e528f71f7f311be88a1de7d 508 Gene3D G3DSA:3.40.50.1770 2 173 1.1E-73 T 22-04-2016 YE2078 442c7a0d8e528f71f7f311be88a1de7d 508 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 425 507 4.9E-36 T 22-04-2016 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2 YE2078 442c7a0d8e528f71f7f311be88a1de7d 508 Gene3D G3DSA:3.40.50.720 174 199 1.6E-5 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2078 442c7a0d8e528f71f7f311be88a1de7d 508 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 2 508 8.3E-293 T 22-04-2016 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0015992|GO:0055114 KEGG: 00760+1.6.1.2 YE2078 442c7a0d8e528f71f7f311be88a1de7d 508 Gene3D G3DSA:3.40.50.1770 200 371 4.7E-48 T 22-04-2016 YE2078 442c7a0d8e528f71f7f311be88a1de7d 508 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 368 2.5E-75 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain YE2078 442c7a0d8e528f71f7f311be88a1de7d 508 SMART SM01002 146 311 5.8E-86 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain YE2078 442c7a0d8e528f71f7f311be88a1de7d 508 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 22-04-2016 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 YE2078 442c7a0d8e528f71f7f311be88a1de7d 508 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 2.5E-52 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal YE2078 442c7a0d8e528f71f7f311be88a1de7d 508 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 170 195 - T 22-04-2016 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 YE2078 442c7a0d8e528f71f7f311be88a1de7d 508 PIRSF PIRSF000203 1 507 1.2E-278 T 22-04-2016 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0015992|GO:0055114 KEGG: 00760+1.6.1.2 YE2078 442c7a0d8e528f71f7f311be88a1de7d 508 SMART SM01003 4 137 1.5E-76 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal YE2078 442c7a0d8e528f71f7f311be88a1de7d 508 PANTHER PTHR10160 1 508 0.0 T 22-04-2016 YE0610 73c7d3bcea511ccc41b7df369a24e60c 376 SUPERFAMILY SSF46565 1 106 3.14E-36 T 22-04-2016 IPR001623 DnaJ domain YE0610 73c7d3bcea511ccc41b7df369a24e60c 376 SUPERFAMILY SSF57938 131 208 1.23E-23 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 YE0610 73c7d3bcea511ccc41b7df369a24e60c 376 Pfam PF01556 DnaJ C terminal domain 118 330 8.7E-46 T 22-04-2016 IPR002939 Chaperone DnaJ, C-terminal YE0610 73c7d3bcea511ccc41b7df369a24e60c 376 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 370 42.348 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 YE0610 73c7d3bcea511ccc41b7df369a24e60c 376 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 347 5.2E-141 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 YE0610 73c7d3bcea511ccc41b7df369a24e60c 376 PANTHER PTHR24078:SF231 1 347 3.9E-173 T 22-04-2016 YE0610 73c7d3bcea511ccc41b7df369a24e60c 376 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 22-04-2016 IPR018253 DnaJ domain, conserved site YE0610 73c7d3bcea511ccc41b7df369a24e60c 376 SMART SM00271 4 62 3.8E-28 T 22-04-2016 IPR001623 DnaJ domain YE0610 73c7d3bcea511ccc41b7df369a24e60c 376 Gene3D G3DSA:2.10.230.10 138 207 1.1E-25 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 YE0610 73c7d3bcea511ccc41b7df369a24e60c 376 Gene3D G3DSA:2.60.260.20 253 330 9.3E-24 T 22-04-2016 YE0610 73c7d3bcea511ccc41b7df369a24e60c 376 Gene3D G3DSA:1.10.287.110 1 103 9.0E-38 T 22-04-2016 IPR001623 DnaJ domain YE0610 73c7d3bcea511ccc41b7df369a24e60c 376 SUPERFAMILY SSF49493 183 259 4.45E-21 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 YE0610 73c7d3bcea511ccc41b7df369a24e60c 376 SUPERFAMILY SSF49493 112 135 4.45E-21 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 YE0610 73c7d3bcea511ccc41b7df369a24e60c 376 PRINTS PR00625 DnaJ domain signature 62 81 6.8E-32 T 22-04-2016 IPR001623 DnaJ domain YE0610 73c7d3bcea511ccc41b7df369a24e60c 376 PRINTS PR00625 DnaJ domain signature 42 62 6.8E-32 T 22-04-2016 IPR001623 DnaJ domain YE0610 73c7d3bcea511ccc41b7df369a24e60c 376 PRINTS PR00625 DnaJ domain signature 7 25 6.8E-32 T 22-04-2016 IPR001623 DnaJ domain YE0610 73c7d3bcea511ccc41b7df369a24e60c 376 PRINTS PR00625 DnaJ domain signature 25 40 6.8E-32 T 22-04-2016 IPR001623 DnaJ domain YE0610 73c7d3bcea511ccc41b7df369a24e60c 376 SUPERFAMILY SSF49493 256 341 5.23E-22 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 YE0610 73c7d3bcea511ccc41b7df369a24e60c 376 PANTHER PTHR24078 1 347 3.9E-173 T 22-04-2016 YE0610 73c7d3bcea511ccc41b7df369a24e60c 376 Pfam PF00226 DnaJ domain 5 67 9.0E-27 T 22-04-2016 IPR001623 DnaJ domain YE0610 73c7d3bcea511ccc41b7df369a24e60c 376 Pfam PF00684 DnaJ central domain 144 204 2.2E-15 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 YE0610 73c7d3bcea511ccc41b7df369a24e60c 376 Gene3D G3DSA:2.60.260.20 104 137 5.1E-22 T 22-04-2016 YE0610 73c7d3bcea511ccc41b7df369a24e60c 376 Gene3D G3DSA:2.60.260.20 208 251 5.1E-22 T 22-04-2016 YE4117 adb0e2ad3ebb69a2f816ca9bb86d1bf1 404 Pfam PF00589 Phage integrase family 206 370 6.5E-24 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 YE4117 adb0e2ad3ebb69a2f816ca9bb86d1bf1 404 PANTHER PTHR30629:SF3 1 396 2.7E-213 T 22-04-2016 YE4117 adb0e2ad3ebb69a2f816ca9bb86d1bf1 404 Pfam PF13356 Domain of unknown function (DUF4102) 3 88 2.6E-19 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 YE4117 adb0e2ad3ebb69a2f816ca9bb86d1bf1 404 SUPERFAMILY SSF56349 99 380 7.06E-61 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YE4117 adb0e2ad3ebb69a2f816ca9bb86d1bf1 404 Gene3D G3DSA:1.10.150.130 99 193 6.6E-15 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal YE4117 adb0e2ad3ebb69a2f816ca9bb86d1bf1 404 PANTHER PTHR30629 1 396 2.7E-213 T 22-04-2016 YE4117 adb0e2ad3ebb69a2f816ca9bb86d1bf1 404 Gene3D G3DSA:1.10.443.10 206 375 2.1E-26 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 YE3602A 03f726b618d62bc7b978609996f1f213 94 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 63 75 3.1E-23 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC YE3602A 03f726b618d62bc7b978609996f1f213 94 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 45 61 3.1E-23 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC YE3602A 03f726b618d62bc7b978609996f1f213 94 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 3.1E-23 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC YE3602A 03f726b618d62bc7b978609996f1f213 94 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 20 36 3.1E-23 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC YE3602A 03f726b618d62bc7b978609996f1f213 94 SUPERFAMILY SSF159127 1 83 8.76E-26 T 22-04-2016 YE3602A 03f726b618d62bc7b978609996f1f213 94 ProSitePatterns PS01097 Hydrogenases expression/synthesis hupF/hypC family signature. 1 9 - T 22-04-2016 IPR019812 Hydrogenase assembly chaperone, conserved site YE3602A 03f726b618d62bc7b978609996f1f213 94 Pfam PF01455 HupF/HypC family 1 72 1.7E-27 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC YE3602A 03f726b618d62bc7b978609996f1f213 94 PANTHER PTHR35177 1 94 2.6E-27 T 22-04-2016 YE3602A 03f726b618d62bc7b978609996f1f213 94 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 78 1.1E-26 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC YE3602A 03f726b618d62bc7b978609996f1f213 94 PANTHER PTHR35177:SF2 1 94 2.6E-27 T 22-04-2016 YE3761 79a6d545a9c55617d9f84bfbb0bac671 160 PANTHER PTHR30505 7 160 2.1E-82 T 22-04-2016 YE3761 79a6d545a9c55617d9f84bfbb0bac671 160 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 8 154 6.8E-60 T 22-04-2016 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YE3761 79a6d545a9c55617d9f84bfbb0bac671 160 Gene3D G3DSA:3.40.930.10 6 154 1.1E-45 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YE3761 79a6d545a9c55617d9f84bfbb0bac671 160 PANTHER PTHR30505:SF6 7 160 2.1E-82 T 22-04-2016 YE3761 79a6d545a9c55617d9f84bfbb0bac671 160 SUPERFAMILY SSF55804 8 154 7.06E-41 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 YE3761 79a6d545a9c55617d9f84bfbb0bac671 160 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 57 73 - T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YE3761 79a6d545a9c55617d9f84bfbb0bac671 160 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 12 154 1.5E-36 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YE0978 a374f5849a17f5bee3bf9ddbbbd92382 452 Gene3D G3DSA:1.10.443.10 177 385 5.8E-12 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 YE0978 a374f5849a17f5bee3bf9ddbbbd92382 452 SUPERFAMILY SSF56349 56 383 1.47E-12 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YE0978 a374f5849a17f5bee3bf9ddbbbd92382 452 Pfam PF00589 Phage integrase family 187 377 9.8E-7 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 YE1304 13d8a747fc4ceecd66b0399399167408 347 SUPERFAMILY SSF103481 67 162 1.57E-10 T 22-04-2016 YE1304 13d8a747fc4ceecd66b0399399167408 347 Pfam PF00892 EamA-like transporter family 28 162 1.2E-17 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YE1304 13d8a747fc4ceecd66b0399399167408 347 Pfam PF00892 EamA-like transporter family 176 327 2.0E-13 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YE1304 13d8a747fc4ceecd66b0399399167408 347 PANTHER PTHR22911 247 327 1.1E-39 T 22-04-2016 YE1304 13d8a747fc4ceecd66b0399399167408 347 PANTHER PTHR22911 24 228 1.1E-39 T 22-04-2016 YE1304 13d8a747fc4ceecd66b0399399167408 347 SUPERFAMILY SSF103481 244 332 6.15E-16 T 22-04-2016 YE2605 c798a9843dc9b651d4ce5381abfe2831 314 SUPERFAMILY SSF53613 3 307 4.21E-62 T 22-04-2016 IPR029056 Ribokinase-like YE2605 c798a9843dc9b651d4ce5381abfe2831 314 Pfam PF00294 pfkB family carbohydrate kinase 7 294 4.0E-47 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB YE2605 c798a9843dc9b651d4ce5381abfe2831 314 Gene3D G3DSA:3.40.1190.20 3 309 1.7E-61 T 22-04-2016 IPR029056 Ribokinase-like YE2605 c798a9843dc9b651d4ce5381abfe2831 314 PANTHER PTHR10584 7 292 4.2E-51 T 22-04-2016 YE3280 d4967b1eb9a96d6a70943ac2e2c9a261 398 PANTHER PTHR30525 1 398 1.3E-224 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 YE3280 d4967b1eb9a96d6a70943ac2e2c9a261 398 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 392 45.697 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 YE3280 d4967b1eb9a96d6a70943ac2e2c9a261 398 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 396 1.2E-175 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 YE3280 d4967b1eb9a96d6a70943ac2e2c9a261 398 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 5.0E-46 T 22-04-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 YE3280 d4967b1eb9a96d6a70943ac2e2c9a261 398 SUPERFAMILY SSF51735 2 150 2.12E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3280 d4967b1eb9a96d6a70943ac2e2c9a261 398 SUPERFAMILY SSF69055 301 395 6.93E-29 T 22-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 YE3280 d4967b1eb9a96d6a70943ac2e2c9a261 398 SUPERFAMILY SSF55347 126 274 2.68E-61 T 22-04-2016 YE3280 d4967b1eb9a96d6a70943ac2e2c9a261 398 PIRSF PIRSF006205 1 398 8.2E-152 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 YE3280 d4967b1eb9a96d6a70943ac2e2c9a261 398 Gene3D G3DSA:3.40.50.720 1 150 4.1E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3280 d4967b1eb9a96d6a70943ac2e2c9a261 398 Gene3D G3DSA:1.10.1740.10 313 395 1.4E-27 T 22-04-2016 YE3280 d4967b1eb9a96d6a70943ac2e2c9a261 398 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 239 9.8E-36 T 22-04-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 YE3280 d4967b1eb9a96d6a70943ac2e2c9a261 398 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 387 1.8E-39 T 22-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 YE1032 abfbce75a883082697bd31528da0ba83 1296 SUPERFAMILY SSF55326 220 427 4.88E-65 T 22-04-2016 YE1032 abfbce75a883082697bd31528da0ba83 1296 SUPERFAMILY SSF55326 618 815 1.75E-66 T 22-04-2016 YE1032 abfbce75a883082697bd31528da0ba83 1296 Gene3D G3DSA:3.30.1330.10 210 420 1.4E-39 T 22-04-2016 IPR016188 PurM-like, N-terminal domain YE1032 abfbce75a883082697bd31528da0ba83 1296 Gene3D G3DSA:3.30.1330.10 644 809 3.4E-15 T 22-04-2016 IPR016188 PurM-like, N-terminal domain YE1032 abfbce75a883082697bd31528da0ba83 1296 Gene3D G3DSA:3.40.50.880 1041 1264 9.5E-11 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YE1032 abfbce75a883082697bd31528da0ba83 1296 SMART SM01211 1040 1295 2.7E-159 T 22-04-2016 YE1032 abfbce75a883082697bd31528da0ba83 1296 SUPERFAMILY SSF82697 1 151 9.42E-52 T 22-04-2016 YE1032 abfbce75a883082697bd31528da0ba83 1296 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1296 21.443 T 22-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 YE1032 abfbce75a883082697bd31528da0ba83 1296 PANTHER PTHR10099:SF5 1 1296 0.0 T 22-04-2016 YE1032 abfbce75a883082697bd31528da0ba83 1296 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1040 1293 1.2E-105 T 22-04-2016 YE1032 abfbce75a883082697bd31528da0ba83 1296 Pfam PF02769 AIR synthase related protein, C-terminal domain 431 587 6.7E-28 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain YE1032 abfbce75a883082697bd31528da0ba83 1296 Pfam PF02769 AIR synthase related protein, C-terminal domain 835 965 2.6E-12 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain YE1032 abfbce75a883082697bd31528da0ba83 1296 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 3 1294 0.0 T 22-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 YE1032 abfbce75a883082697bd31528da0ba83 1296 SUPERFAMILY SSF52317 1036 1294 5.98E-98 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YE1032 abfbce75a883082697bd31528da0ba83 1296 SUPERFAMILY SSF56042 822 1034 7.78E-55 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain YE1032 abfbce75a883082697bd31528da0ba83 1296 SUPERFAMILY SSF109736 154 219 5.49E-21 T 22-04-2016 YE1032 abfbce75a883082697bd31528da0ba83 1296 SUPERFAMILY SSF56042 430 614 1.21E-53 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain YE1032 abfbce75a883082697bd31528da0ba83 1296 PANTHER PTHR10099 1 1296 0.0 T 22-04-2016 YE3755 670bc41069795ae2d627da3e840444bc 187 PANTHER PTHR21485 9 183 1.3E-69 T 22-04-2016 YE3755 670bc41069795ae2d627da3e840444bc 187 Gene3D G3DSA:3.40.50.1000 16 178 4.9E-49 T 22-04-2016 IPR023214 HAD-like domain YE3755 670bc41069795ae2d627da3e840444bc 187 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 25 177 7.7E-69 T 22-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 YE3755 670bc41069795ae2d627da3e840444bc 187 SUPERFAMILY SSF56784 21 179 1.58E-41 T 22-04-2016 IPR023214 HAD-like domain YE3755 670bc41069795ae2d627da3e840444bc 187 PIRSF PIRSF006118 12 187 1.0E-72 T 22-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 YE3755 670bc41069795ae2d627da3e840444bc 187 Pfam PF08282 haloacid dehalogenase-like hydrolase 94 161 1.4E-9 T 22-04-2016 IPR023214 HAD-like domain YE0921 7826a7e2c2cc3a670da7fa1a891e6015 154 SUPERFAMILY SSF53098 3 143 3.92E-57 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE0921 7826a7e2c2cc3a670da7fa1a891e6015 154 Pfam PF00075 RNase H 3 141 8.0E-53 T 22-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 YE0921 7826a7e2c2cc3a670da7fa1a891e6015 154 Hamap MF_00042 Ribonuclease H [rnhA]. 2 149 37.64 T 22-04-2016 IPR022892 Ribonuclease H GO:0004523 YE0921 7826a7e2c2cc3a670da7fa1a891e6015 154 Gene3D G3DSA:3.30.420.10 2 148 7.2E-60 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE0921 7826a7e2c2cc3a670da7fa1a891e6015 154 PANTHER PTHR10642 1 152 1.2E-61 T 22-04-2016 YE1684 74c9fbf1f568b4ffabc5172fd59c2a6f 792 SMART SM00387 688 792 0.0021 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE1684 74c9fbf1f568b4ffabc5172fd59c2a6f 792 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 30 138 1.4E-24 T 22-04-2016 YE1684 74c9fbf1f568b4ffabc5172fd59c2a6f 792 SUPERFAMILY SSF55874 648 787 4.06E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE1684 74c9fbf1f568b4ffabc5172fd59c2a6f 792 Gene3D G3DSA:3.30.565.10 16 195 5.2E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE1684 74c9fbf1f568b4ffabc5172fd59c2a6f 792 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 693 779 1.6E-8 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE1684 74c9fbf1f568b4ffabc5172fd59c2a6f 792 SUPERFAMILY SSF55874 15 170 9.3E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE1684 74c9fbf1f568b4ffabc5172fd59c2a6f 792 PRINTS PR00344 Bacterial sensor protein C-terminal signature 724 738 6.2E-5 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE1684 74c9fbf1f568b4ffabc5172fd59c2a6f 792 PRINTS PR00344 Bacterial sensor protein C-terminal signature 754 772 6.2E-5 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE1684 74c9fbf1f568b4ffabc5172fd59c2a6f 792 Gene3D G3DSA:3.30.565.10 651 788 1.3E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE0530 136743621f14231981512833b546bbb6 516 SUPERFAMILY SSF53067 1 249 9.07E-58 T 22-04-2016 YE0530 136743621f14231981512833b546bbb6 516 PIRSF PIRSF000538 1 505 7.7E-115 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 YE0530 136743621f14231981512833b546bbb6 516 PANTHER PTHR10196:SF70 1 510 0.0 T 22-04-2016 YE0530 136743621f14231981512833b546bbb6 516 PANTHER PTHR10196 1 510 0.0 T 22-04-2016 YE0530 136743621f14231981512833b546bbb6 516 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 269 453 3.4E-20 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 YE0530 136743621f14231981512833b546bbb6 516 Gene3D G3DSA:3.30.420.40 1 246 7.0E-56 T 22-04-2016 YE0530 136743621f14231981512833b546bbb6 516 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 2 246 5.7E-48 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 YE0530 136743621f14231981512833b546bbb6 516 Gene3D G3DSA:3.30.420.40 248 501 1.3E-40 T 22-04-2016 YE0530 136743621f14231981512833b546bbb6 516 SUPERFAMILY SSF53067 248 497 6.12E-49 T 22-04-2016 YE1905 d494a5fd8164543cd6fd8daa94a35f34 112 SUPERFAMILY SSF54427 5 111 8.29E-22 T 22-04-2016 IPR032710 NTF2-like domain YE1905 d494a5fd8164543cd6fd8daa94a35f34 112 PIRSF PIRSF030561 1 111 1.8E-27 T 22-04-2016 IPR008317 Uncharacterised conserved protein UCP030561 YE1905 d494a5fd8164543cd6fd8daa94a35f34 112 Gene3D G3DSA:3.10.450.50 8 111 1.9E-11 T 22-04-2016 IPR032710 NTF2-like domain YE1905 d494a5fd8164543cd6fd8daa94a35f34 112 Pfam PF12680 SnoaL-like domain 8 105 2.3E-9 T 22-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain YE2483 a21a591139e8d68a3941371551752957 674 TIGRFAM TIGR03938 deacetyl_PgaB: poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB 50 666 3.7E-279 T 22-04-2016 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB GO:0016810|GO:0042710 KEGG: 00240+3.5.1.-|KEGG: 00260+3.5.1.-|KEGG: 00332+3.5.1.-|KEGG: 00364+3.5.1.-|KEGG: 00480+3.5.1.-|KEGG: 00520+3.5.1.-|KEGG: 00600+3.5.1.-|KEGG: 00760+3.5.1.-|KEGG: 00930+3.5.1.- YE2483 a21a591139e8d68a3941371551752957 674 PANTHER PTHR34216:SF2 1 309 0.0 T 22-04-2016 YE2483 a21a591139e8d68a3941371551752957 674 PANTHER PTHR34216:SF2 463 648 0.0 T 22-04-2016 YE2483 a21a591139e8d68a3941371551752957 674 SUPERFAMILY SSF88713 225 271 3.52E-35 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 YE2483 a21a591139e8d68a3941371551752957 674 SUPERFAMILY SSF88713 67 197 3.52E-35 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 YE2483 a21a591139e8d68a3941371551752957 674 SUPERFAMILY SSF88713 424 434 3.52E-35 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 YE2483 a21a591139e8d68a3941371551752957 674 Pfam PF01522 Polysaccharide deacetylase 104 271 1.4E-27 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 YE2483 a21a591139e8d68a3941371551752957 674 Pfam PF14883 Hypothetical glycosyl hydrolase family 13 319 646 5.9E-150 T 22-04-2016 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal KEGG: 00240+3.5.1.-|KEGG: 00260+3.5.1.-|KEGG: 00332+3.5.1.-|KEGG: 00364+3.5.1.-|KEGG: 00480+3.5.1.-|KEGG: 00520+3.5.1.-|KEGG: 00600+3.5.1.-|KEGG: 00760+3.5.1.-|KEGG: 00930+3.5.1.- YE2483 a21a591139e8d68a3941371551752957 674 PANTHER PTHR34216 1 309 0.0 T 22-04-2016 YE2483 a21a591139e8d68a3941371551752957 674 PANTHER PTHR34216 463 648 0.0 T 22-04-2016 YE2483 a21a591139e8d68a3941371551752957 674 Gene3D G3DSA:3.20.20.370 73 271 4.0E-29 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 YE2483 a21a591139e8d68a3941371551752957 674 Gene3D G3DSA:3.20.20.370 424 490 4.0E-29 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 YE2549 5e2228e3036d2f823a5cb57d7c013a7a 260 PANTHER PTHR30065 2 260 6.4E-99 T 22-04-2016 YE2549 5e2228e3036d2f823a5cb57d7c013a7a 260 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 13 254 8.9E-76 T 22-04-2016 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 YE2549 5e2228e3036d2f823a5cb57d7c013a7a 260 PANTHER PTHR30065:SF1 2 260 6.4E-99 T 22-04-2016 YE2549 5e2228e3036d2f823a5cb57d7c013a7a 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 9.1E-31 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YE2549 5e2228e3036d2f823a5cb57d7c013a7a 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 202 221 9.1E-31 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YE2549 5e2228e3036d2f823a5cb57d7c013a7a 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 180 202 9.1E-31 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YE2549 5e2228e3036d2f823a5cb57d7c013a7a 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 22 43 9.1E-31 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YE2549 5e2228e3036d2f823a5cb57d7c013a7a 260 Pfam PF01311 Bacterial export proteins, family 1 14 246 1.8E-67 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YE1889 1c74d316fd4e8b88757b1083197cd10c 110 PANTHER PTHR40112 1 110 8.4E-15 T 22-04-2016 YE1889 1c74d316fd4e8b88757b1083197cd10c 110 Pfam PF07883 Cupin domain 35 92 2.3E-9 T 22-04-2016 IPR013096 Cupin 2, conserved barrel YE1889 1c74d316fd4e8b88757b1083197cd10c 110 PIRSF PIRSF029883 3 110 4.8E-29 T 22-04-2016 IPR025499 Pectin degradation protein KdgF UniPathway: UPA00545 YE1889 1c74d316fd4e8b88757b1083197cd10c 110 Gene3D G3DSA:2.60.120.10 2 110 5.7E-26 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YE1889 1c74d316fd4e8b88757b1083197cd10c 110 PANTHER PTHR40112:SF1 1 110 8.4E-15 T 22-04-2016 YE1889 1c74d316fd4e8b88757b1083197cd10c 110 SUPERFAMILY SSF51182 8 109 5.54E-18 T 22-04-2016 IPR011051 RmlC-like cupin domain YE2935 7490feda5570a7c1f1f43a6abecde408 228 TIGRFAM TIGR02796 tolQ: protein TolQ 5 219 6.5E-94 T 22-04-2016 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 YE2935 7490feda5570a7c1f1f43a6abecde408 228 Pfam PF01618 MotA/TolQ/ExbB proton channel family 79 207 3.8E-42 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 YE2935 7490feda5570a7c1f1f43a6abecde408 228 PANTHER PTHR30625 2 227 1.0E-79 T 22-04-2016 YE2935 7490feda5570a7c1f1f43a6abecde408 228 PANTHER PTHR30625:SF3 2 227 1.0E-79 T 22-04-2016 YE0887 68655721872063e92beb0be4d36f421f 565 Gene3D G3DSA:2.40.50.230 261 346 3.1E-10 T 22-04-2016 IPR006531 Gp5 N-terminal YE0887 68655721872063e92beb0be4d36f421f 565 SUPERFAMILY SSF69349 339 510 5.65E-19 T 22-04-2016 YE0887 68655721872063e92beb0be4d36f421f 565 SUPERFAMILY SSF69255 256 347 2.88E-14 T 22-04-2016 YE4208 3c197a3845b992606bd0b5ec65c5c9bf 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 50.182 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YE4208 3c197a3845b992606bd0b5ec65c5c9bf 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 1.7E-74 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YE4208 3c197a3845b992606bd0b5ec65c5c9bf 513 Gene3D G3DSA:2.40.30.20 1 93 8.2E-30 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YE4208 3c197a3845b992606bd0b5ec65c5c9bf 513 PANTHER PTHR15184:SF3 1 496 5.6E-295 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YE4208 3c197a3845b992606bd0b5ec65c5c9bf 513 Gene3D G3DSA:3.40.50.300 94 382 2.4E-115 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE4208 3c197a3845b992606bd0b5ec65c5c9bf 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 29 92 3.2E-13 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YE4208 3c197a3845b992606bd0b5ec65c5c9bf 513 SUPERFAMILY SSF47917 383 511 1.18E-45 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YE4208 3c197a3845b992606bd0b5ec65c5c9bf 513 Gene3D G3DSA:1.20.150.20 383 510 1.0E-48 T 22-04-2016 YE4208 3c197a3845b992606bd0b5ec65c5c9bf 513 SUPERFAMILY SSF50615 10 94 5.1E-26 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YE4208 3c197a3845b992606bd0b5ec65c5c9bf 513 SUPERFAMILY SSF52540 96 381 6.7E-96 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE4208 3c197a3845b992606bd0b5ec65c5c9bf 513 PANTHER PTHR15184 1 496 5.6E-295 T 22-04-2016 YE4208 3c197a3845b992606bd0b5ec65c5c9bf 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YE4208 3c197a3845b992606bd0b5ec65c5c9bf 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 2.8E-261 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YE4208 3c197a3845b992606bd0b5ec65c5c9bf 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 1.9E-45 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YE1087 524cf188f1af46f2e817fa659ffc1565 146 PANTHER PTHR23091 1 138 1.0E-12 T 22-04-2016 YE1087 524cf188f1af46f2e817fa659ffc1565 146 SUPERFAMILY SSF55729 1 140 3.14E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE1087 524cf188f1af46f2e817fa659ffc1565 146 Gene3D G3DSA:3.40.630.30 1 141 8.5E-21 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE1087 524cf188f1af46f2e817fa659ffc1565 146 Pfam PF13673 Acetyltransferase (GNAT) domain 48 133 9.3E-13 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YE1142 f8c359537f0641a39ba897b76950e97c 150 Pfam PF04284 Protein of unknown function (DUF441) 9 147 3.5E-47 T 22-04-2016 IPR007382 Uncharacterised protein family UPF0756, transmembrame YE1142 f8c359537f0641a39ba897b76950e97c 150 PANTHER PTHR38452 2 149 1.6E-72 T 22-04-2016 YE1142 f8c359537f0641a39ba897b76950e97c 150 Hamap MF_01874 UPF0756 membrane protein YeaL [yeaL]. 5 150 18.827 T 22-04-2016 IPR007382 Uncharacterised protein family UPF0756, transmembrame YE1142 f8c359537f0641a39ba897b76950e97c 150 PANTHER PTHR38452:SF1 2 149 1.6E-72 T 22-04-2016 YE1142 f8c359537f0641a39ba897b76950e97c 150 ProDom PD021096 MEMBRANE YEAL PRECURSOR SIGNAL PROTEIN TRANSMEMBRANE YTWI HI1074 INTEGRAL SPANNING 5 132 2.0E-34 T 22-04-2016 IPR007382 Uncharacterised protein family UPF0756, transmembrame YE3275 7261785fdb5f498c0eac38f648aec417 165 PIRSF PIRSF002094 1 165 5.6E-64 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 YE3275 7261785fdb5f498c0eac38f648aec417 165 Gene3D G3DSA:3.30.910.20 12 165 2.3E-41 T 22-04-2016 YE3275 7261785fdb5f498c0eac38f648aec417 165 SUPERFAMILY SSF111384 22 164 1.28E-39 T 22-04-2016 IPR024930 Skp domain YE3275 7261785fdb5f498c0eac38f648aec417 165 PANTHER PTHR35089 2 164 7.0E-71 T 22-04-2016 YE3275 7261785fdb5f498c0eac38f648aec417 165 SMART SM00935 12 165 5.8E-57 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 YE3275 7261785fdb5f498c0eac38f648aec417 165 Pfam PF03938 Outer membrane protein (OmpH-like) 10 163 5.1E-38 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 YE3275 7261785fdb5f498c0eac38f648aec417 165 PANTHER PTHR35089:SF1 2 164 7.0E-71 T 22-04-2016 YE3302 596b812dd775b3e7f857199b1f70c3aa 73 Pfam PF06004 Bacterial protein of unknown function (DUF903) 23 71 6.5E-26 T 22-04-2016 IPR010305 Protein of unknown function DUF903 YE3302 596b812dd775b3e7f857199b1f70c3aa 73 PANTHER PTHR37011:SF2 1 72 3.2E-37 T 22-04-2016 YE3302 596b812dd775b3e7f857199b1f70c3aa 73 Gene3D G3DSA:2.30.30.100 19 72 2.1E-32 T 22-04-2016 YE3302 596b812dd775b3e7f857199b1f70c3aa 73 SUPERFAMILY SSF50182 21 71 8.18E-20 T 22-04-2016 IPR010920 LSM domain YE3302 596b812dd775b3e7f857199b1f70c3aa 73 PANTHER PTHR37011 1 72 3.2E-37 T 22-04-2016 YE2107 1ea109cd1f3144aae197adf21fe7e31b 327 SUPERFAMILY SSF143865 11 259 9.81E-54 T 22-04-2016 YE2107 1ea109cd1f3144aae197adf21fe7e31b 327 SUPERFAMILY SSF144083 263 324 4.18E-13 T 22-04-2016 YE2107 1ea109cd1f3144aae197adf21fe7e31b 327 Gene3D G3DSA:3.30.460.20 36 137 0.001 T 22-04-2016 YE2107 1ea109cd1f3144aae197adf21fe7e31b 327 PANTHER PTHR21535 42 327 9.7E-47 T 22-04-2016 YE2107 1ea109cd1f3144aae197adf21fe7e31b 327 Gene3D G3DSA:1.20.58.340 145 243 8.9E-15 T 22-04-2016 YE2107 1ea109cd1f3144aae197adf21fe7e31b 327 Pfam PF01544 CorA-like Mg2+ transporter protein 39 322 7.5E-67 T 22-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 YE2107 1ea109cd1f3144aae197adf21fe7e31b 327 Gene3D G3DSA:1.20.58.340 252 327 9.4E-19 T 22-04-2016 YE0423 1f7fbcd7a5ccdda6d2a565e0c93b36e2 219 SMART SM00862 145 216 5.8E-22 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YE0423 1f7fbcd7a5ccdda6d2a565e0c93b36e2 219 Gene3D G3DSA:1.10.10.10 123 218 1.6E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0423 1f7fbcd7a5ccdda6d2a565e0c93b36e2 219 PANTHER PTHR26402 1 218 1.0E-155 T 22-04-2016 YE0423 1f7fbcd7a5ccdda6d2a565e0c93b36e2 219 SMART SM00448 1 112 8.8E-36 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE0423 1f7fbcd7a5ccdda6d2a565e0c93b36e2 219 PANTHER PTHR26402:SF595 1 218 1.0E-155 T 22-04-2016 YE0423 1f7fbcd7a5ccdda6d2a565e0c93b36e2 219 SUPERFAMILY SSF52172 1 175 9.23E-38 T 22-04-2016 IPR011006 CheY-like superfamily YE0423 1f7fbcd7a5ccdda6d2a565e0c93b36e2 219 Gene3D G3DSA:3.40.50.2300 1 122 3.7E-35 T 22-04-2016 YE0423 1f7fbcd7a5ccdda6d2a565e0c93b36e2 219 Pfam PF00072 Response regulator receiver domain 4 113 6.5E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE0423 1f7fbcd7a5ccdda6d2a565e0c93b36e2 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 6.9E-20 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YE1750 3afc60438fad690afa20ff46ccdee9a9 500 PANTHER PTHR11785:SF77 4 190 1.1E-206 T 22-04-2016 YE1750 3afc60438fad690afa20ff46ccdee9a9 500 PANTHER PTHR11785:SF77 222 494 1.1E-206 T 22-04-2016 YE1750 3afc60438fad690afa20ff46ccdee9a9 500 Pfam PF13520 Amino acid permease 9 440 3.5E-66 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YE1750 3afc60438fad690afa20ff46ccdee9a9 500 PANTHER PTHR11785 4 190 1.1E-206 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YE1750 3afc60438fad690afa20ff46ccdee9a9 500 PANTHER PTHR11785 222 494 1.1E-206 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YE1750 3afc60438fad690afa20ff46ccdee9a9 500 PIRSF PIRSF006060 1 447 8.8E-47 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YE0255 de378ac681b8539db274e42d021a9fc6 484 Pfam PF02646 RmuC family 147 443 1.1E-104 T 22-04-2016 IPR003798 DNA recombination RmuC YE0255 de378ac681b8539db274e42d021a9fc6 484 PANTHER PTHR30563 1 476 1.7E-147 T 22-04-2016 YE0920 f78710f956e0ce60f15b499baa87183f 239 SUPERFAMILY SSF53335 77 206 5.63E-15 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE0920 f78710f956e0ce60f15b499baa87183f 239 PANTHER PTHR10108:SF836 77 219 9.3E-85 T 22-04-2016 YE0920 f78710f956e0ce60f15b499baa87183f 239 Pfam PF08241 Methyltransferase domain 77 125 3.7E-9 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 YE0920 f78710f956e0ce60f15b499baa87183f 239 PANTHER PTHR10108 77 219 9.3E-85 T 22-04-2016 YE0920 f78710f956e0ce60f15b499baa87183f 239 Gene3D G3DSA:3.40.50.150 73 206 4.3E-16 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE4155 74a0d31d505a32cbdfbac1c2d6e9158a 723 SUPERFAMILY SSF49695 30 122 2.25E-8 T 22-04-2016 IPR011024 Gamma-crystallin-related YE4155 74a0d31d505a32cbdfbac1c2d6e9158a 723 Gene3D G3DSA:2.60.20.10 31 123 5.7E-19 T 22-04-2016 YE4155 74a0d31d505a32cbdfbac1c2d6e9158a 723 Gene3D G3DSA:3.40.630.30 578 720 1.5E-7 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE4155 74a0d31d505a32cbdfbac1c2d6e9158a 723 SUPERFAMILY SSF55729 577 721 2.3E-7 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE1255 8c815c28db801d0f7e5dd70072eeb3fe 343 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 4.5E-21 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE1255 8c815c28db801d0f7e5dd70072eeb3fe 343 SUPERFAMILY SSF47413 2 59 5.23E-19 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE1255 8c815c28db801d0f7e5dd70072eeb3fe 343 Gene3D G3DSA:3.40.50.2300 170 332 4.9E-52 T 22-04-2016 YE1255 8c815c28db801d0f7e5dd70072eeb3fe 343 Gene3D G3DSA:1.10.260.40 3 57 1.3E-26 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE1255 8c815c28db801d0f7e5dd70072eeb3fe 343 PANTHER PTHR30146 1 335 3.9E-130 T 22-04-2016 YE1255 8c815c28db801d0f7e5dd70072eeb3fe 343 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE1255 8c815c28db801d0f7e5dd70072eeb3fe 343 Pfam PF13377 Periplasmic binding protein-like domain 172 331 2.9E-32 T 22-04-2016 YE1255 8c815c28db801d0f7e5dd70072eeb3fe 343 SMART SM00354 1 71 8.7E-34 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE1255 8c815c28db801d0f7e5dd70072eeb3fe 343 SUPERFAMILY SSF53822 61 336 1.96E-71 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YE1255 8c815c28db801d0f7e5dd70072eeb3fe 343 PANTHER PTHR30146:SF48 1 335 3.9E-130 T 22-04-2016 YE1255 8c815c28db801d0f7e5dd70072eeb3fe 343 Gene3D G3DSA:3.40.50.2300 58 169 6.9E-41 T 22-04-2016 YE1255 8c815c28db801d0f7e5dd70072eeb3fe 343 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 8.0E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE1255 8c815c28db801d0f7e5dd70072eeb3fe 343 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 8.0E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE2942 294f849563a89faa5e39ebbc9af0bf5a 388 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.203 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 YE2942 294f849563a89faa5e39ebbc9af0bf5a 388 Pfam PF08442 ATP-grasp domain 2 203 5.2E-83 T 22-04-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 YE2942 294f849563a89faa5e39ebbc9af0bf5a 388 Gene3D G3DSA:3.40.50.261 241 383 5.5E-65 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 YE2942 294f849563a89faa5e39ebbc9af0bf5a 388 PIRSF PIRSF001554 1 388 2.8E-155 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 YE2942 294f849563a89faa5e39ebbc9af0bf5a 388 Gene3D G3DSA:3.30.470.20 96 239 8.5E-57 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 YE2942 294f849563a89faa5e39ebbc9af0bf5a 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 22-04-2016 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 YE2942 294f849563a89faa5e39ebbc9af0bf5a 388 SUPERFAMILY SSF56059 1 238 5.66E-81 T 22-04-2016 YE2942 294f849563a89faa5e39ebbc9af0bf5a 388 PANTHER PTHR11815 1 388 1.4E-236 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 YE2942 294f849563a89faa5e39ebbc9af0bf5a 388 SUPERFAMILY SSF52210 239 385 5.1E-53 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 YE2942 294f849563a89faa5e39ebbc9af0bf5a 388 Pfam PF00549 CoA-ligase 262 382 4.3E-24 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 YE2942 294f849563a89faa5e39ebbc9af0bf5a 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 384 9.3E-182 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 YE2942 294f849563a89faa5e39ebbc9af0bf5a 388 Gene3D G3DSA:3.30.1490.20 22 95 4.8E-35 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 YE0626 ddf3253f9e28c16af6f8a0eddbd0825d 153 Gene3D G3DSA:3.40.430.10 4 153 2.8E-56 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain YE0626 ddf3253f9e28c16af6f8a0eddbd0825d 153 PANTHER PTHR22778:SF16 2 153 1.0E-43 T 22-04-2016 YE0626 ddf3253f9e28c16af6f8a0eddbd0825d 153 SUPERFAMILY SSF53597 3 153 2.23E-54 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain YE0626 ddf3253f9e28c16af6f8a0eddbd0825d 153 PRINTS PR00070 Dihydrofolate reductase signature 34 45 9.5E-15 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 YE0626 ddf3253f9e28c16af6f8a0eddbd0825d 153 PRINTS PR00070 Dihydrofolate reductase signature 21 29 9.5E-15 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 YE0626 ddf3253f9e28c16af6f8a0eddbd0825d 153 PRINTS PR00070 Dihydrofolate reductase signature 84 98 9.5E-15 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 YE0626 ddf3253f9e28c16af6f8a0eddbd0825d 153 PRINTS PR00070 Dihydrofolate reductase signature 7 17 9.5E-15 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 YE0626 ddf3253f9e28c16af6f8a0eddbd0825d 153 PANTHER PTHR22778 2 153 1.0E-43 T 22-04-2016 YE0626 ddf3253f9e28c16af6f8a0eddbd0825d 153 Pfam PF00186 Dihydrofolate reductase 3 152 1.4E-55 T 22-04-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 YE0626 ddf3253f9e28c16af6f8a0eddbd0825d 153 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 7 29 - T 22-04-2016 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 YE0626 ddf3253f9e28c16af6f8a0eddbd0825d 153 PIRSF PIRSF000194 1 153 3.4E-55 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 YE0085 68e630045c0a5fa298d7ee02b1d7f057 458 SMART SM00387 345 455 1.4E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE0085 68e630045c0a5fa298d7ee02b1d7f057 458 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 347 454 5.8E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE0085 68e630045c0a5fa298d7ee02b1d7f057 458 PANTHER PTHR24423:SF553 178 456 5.1E-262 T 22-04-2016 YE0085 68e630045c0a5fa298d7ee02b1d7f057 458 PANTHER PTHR24423:SF553 1 134 5.1E-262 T 22-04-2016 YE0085 68e630045c0a5fa298d7ee02b1d7f057 458 PANTHER PTHR24423 178 456 5.1E-262 T 22-04-2016 YE0085 68e630045c0a5fa298d7ee02b1d7f057 458 PANTHER PTHR24423 1 134 5.1E-262 T 22-04-2016 YE0085 68e630045c0a5fa298d7ee02b1d7f057 458 SMART SM00388 238 300 1.7E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE0085 68e630045c0a5fa298d7ee02b1d7f057 458 Pfam PF00672 HAMP domain 165 233 7.4E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YE0085 68e630045c0a5fa298d7ee02b1d7f057 458 SUPERFAMILY SSF55874 289 455 1.31E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE0085 68e630045c0a5fa298d7ee02b1d7f057 458 Pfam PF16527 Two-component sensor protein CpxA, periplasmic domain 82 153 6.3E-11 T 22-04-2016 IPR032404 Two-component sensor protein CpxA, periplasmic domain YE0085 68e630045c0a5fa298d7ee02b1d7f057 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 433 6.6E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE0085 68e630045c0a5fa298d7ee02b1d7f057 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 408 6.6E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE0085 68e630045c0a5fa298d7ee02b1d7f057 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 394 6.6E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE0085 68e630045c0a5fa298d7ee02b1d7f057 458 SUPERFAMILY SSF47384 224 299 1.51E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE0085 68e630045c0a5fa298d7ee02b1d7f057 458 Gene3D G3DSA:3.30.565.10 286 455 9.9E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE0085 68e630045c0a5fa298d7ee02b1d7f057 458 Gene3D G3DSA:1.10.287.130 228 285 5.3E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE0085 68e630045c0a5fa298d7ee02b1d7f057 458 SMART SM00304 184 237 1.0E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YE0085 68e630045c0a5fa298d7ee02b1d7f057 458 Pfam PF00512 His Kinase A (phospho-acceptor) domain 239 298 1.3E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE0239 a281431e23c848d13cb728a53aa7daad 770 Pfam PF16967 Fimbrial, FimD or usher-like 268 336 8.5E-24 T 22-04-2016 IPR032636 Pilus assembly protein domain YE2257 1446cfebfb63befc72250d10cc790473 642 PANTHER PTHR11390 522 610 8.1E-198 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 YE2257 1446cfebfb63befc72250d10cc790473 642 PANTHER PTHR11390 1 504 8.1E-198 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 YE2257 1446cfebfb63befc72250d10cc790473 642 SMART SM00493 2 125 9.4E-32 T 22-04-2016 IPR006171 Toprim domain YE2257 1446cfebfb63befc72250d10cc790473 642 SMART SM00436 129 224 9.5E-36 T 22-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 YE2257 1446cfebfb63befc72250d10cc790473 642 Pfam PF01751 Toprim domain 4 136 5.6E-18 T 22-04-2016 IPR006171 Toprim domain YE2257 1446cfebfb63befc72250d10cc790473 642 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 318 333 - T 22-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 YE2257 1446cfebfb63befc72250d10cc790473 642 PANTHER PTHR11390:SF21 522 610 8.1E-198 T 22-04-2016 YE2257 1446cfebfb63befc72250d10cc790473 642 PANTHER PTHR11390:SF21 1 504 8.1E-198 T 22-04-2016 YE2257 1446cfebfb63befc72250d10cc790473 642 SUPERFAMILY SSF56712 2 609 1.06E-187 T 22-04-2016 IPR023405 DNA topoisomerase, type IA, core domain YE2257 1446cfebfb63befc72250d10cc790473 642 Gene3D G3DSA:2.70.20.10 370 489 1.9E-47 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 YE2257 1446cfebfb63befc72250d10cc790473 642 Gene3D G3DSA:2.70.20.10 220 253 1.9E-47 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 YE2257 1446cfebfb63befc72250d10cc790473 642 SMART SM00437 281 559 1.8E-104 T 22-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 YE2257 1446cfebfb63befc72250d10cc790473 642 Hamap MF_00953 DNA topoisomerase 3 [topB]. 2 642 65.78 T 22-04-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 YE2257 1446cfebfb63befc72250d10cc790473 642 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 522 536 3.3E-25 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 YE2257 1446cfebfb63befc72250d10cc790473 642 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 403 419 3.3E-25 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 YE2257 1446cfebfb63befc72250d10cc790473 642 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 99 112 3.3E-25 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 YE2257 1446cfebfb63befc72250d10cc790473 642 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 194 212 3.3E-25 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 YE2257 1446cfebfb63befc72250d10cc790473 642 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 324 333 3.3E-25 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 YE2257 1446cfebfb63befc72250d10cc790473 642 Gene3D G3DSA:3.40.50.140 2 154 5.1E-48 T 22-04-2016 IPR006171 Toprim domain YE2257 1446cfebfb63befc72250d10cc790473 642 Gene3D G3DSA:1.10.460.10 491 608 1.9E-51 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 YE2257 1446cfebfb63befc72250d10cc790473 642 Gene3D G3DSA:1.10.460.10 159 218 1.9E-51 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 YE2257 1446cfebfb63befc72250d10cc790473 642 Pfam PF01131 DNA topoisomerase 159 594 2.1E-111 T 22-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 YE2257 1446cfebfb63befc72250d10cc790473 642 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 637 7.0E-280 T 22-04-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 YE3409 ee3d52f004e0102e184bd8f098bfe86d 131 ProDom PD008204 TRAM PLASMID CONJUGATION DNA-BINDING 3D-STRUCTURE TRANSFER: SEQUENCING DIRECT CONJUGATIVE MATING 1 124 4.0E-22 T 22-04-2016 IPR007925 Relaxosome protein TraM GO:0000746|GO:0003677 YE3409 ee3d52f004e0102e184bd8f098bfe86d 131 Gene3D G3DSA:1.10.10.450 2 54 6.2E-23 T 22-04-2016 YE3409 ee3d52f004e0102e184bd8f098bfe86d 131 SUPERFAMILY SSF140581 58 122 4.05E-6 T 22-04-2016 YE3409 ee3d52f004e0102e184bd8f098bfe86d 131 Pfam PF05261 TraM protein, DNA-binding 1 121 2.1E-34 T 22-04-2016 IPR007925 Relaxosome protein TraM GO:0000746|GO:0003677 YE3409 ee3d52f004e0102e184bd8f098bfe86d 131 SUPERFAMILY SSF47729 2 54 1.05E-15 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 YE4137 806fc0d07812f40f6bf1a0b815ba9684 275 Gene3D G3DSA:3.10.20.10 40 125 9.3E-33 T 22-04-2016 YE4137 806fc0d07812f40f6bf1a0b815ba9684 275 SUPERFAMILY SSF53927 24 273 4.21E-80 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 YE4137 806fc0d07812f40f6bf1a0b815ba9684 275 Pfam PF02634 FdhD/NarQ family 38 273 4.3E-72 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 YE4137 806fc0d07812f40f6bf1a0b815ba9684 275 Hamap MF_00187 Protein FdhD [fdhD]. 13 274 36.092 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 YE4137 806fc0d07812f40f6bf1a0b815ba9684 275 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 35 275 2.5E-89 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 YE4137 806fc0d07812f40f6bf1a0b815ba9684 275 PANTHER PTHR30592:SF1 5 275 1.6E-127 T 22-04-2016 YE4137 806fc0d07812f40f6bf1a0b815ba9684 275 Gene3D G3DSA:3.40.140.10 139 274 2.9E-48 T 22-04-2016 YE4137 806fc0d07812f40f6bf1a0b815ba9684 275 PANTHER PTHR30592 5 275 1.6E-127 T 22-04-2016 YE4137 806fc0d07812f40f6bf1a0b815ba9684 275 PIRSF PIRSF015626 10 275 1.9E-78 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 YE0532 9e4fad82ad16c1ff14815efa6543615b 407 Pfam PF04932 O-Antigen ligase 193 335 2.1E-17 T 22-04-2016 IPR007016 O-antigen ligase-related YE0532 9e4fad82ad16c1ff14815efa6543615b 407 PANTHER PTHR37422:SF1 10 398 6.8E-139 T 22-04-2016 YE0532 9e4fad82ad16c1ff14815efa6543615b 407 PANTHER PTHR37422 10 398 6.8E-139 T 22-04-2016 YE2272 cc80c1896e91803faeccc7d6890e9e9e 644 SUPERFAMILY SSF52540 75 145 5.21E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2272 cc80c1896e91803faeccc7d6890e9e9e 644 SUPERFAMILY SSF52540 246 368 5.21E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2272 cc80c1896e91803faeccc7d6890e9e9e 644 PANTHER PTHR30267:SF2 1 644 1.7E-303 T 22-04-2016 YE2272 cc80c1896e91803faeccc7d6890e9e9e 644 Pfam PF08298 PrkA AAA domain 20 380 4.4E-175 T 22-04-2016 IPR013153 PrkA AAA domain YE2272 cc80c1896e91803faeccc7d6890e9e9e 644 PANTHER PTHR30267 1 644 1.7E-303 T 22-04-2016 YE2272 cc80c1896e91803faeccc7d6890e9e9e 644 Gene3D G3DSA:3.40.50.300 75 158 2.4E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2272 cc80c1896e91803faeccc7d6890e9e9e 644 Gene3D G3DSA:3.40.50.300 243 329 2.4E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2272 cc80c1896e91803faeccc7d6890e9e9e 644 PIRSF PIRSF000549 1 644 4.5E-286 T 22-04-2016 IPR016230 Serine-protein kinase, PrkA GO:0004672 YE2272 cc80c1896e91803faeccc7d6890e9e9e 644 SMART SM00763 19 380 9.9E-215 T 22-04-2016 IPR013153 PrkA AAA domain YE2272 cc80c1896e91803faeccc7d6890e9e9e 644 Pfam PF06798 PrkA serine protein kinase C-terminal domain 383 636 3.4E-74 T 22-04-2016 IPR010650 PrkA C-terminal domain YE0544 657664219b62622a1a5c732630f9391d 569 PANTHER PTHR34847 4 564 7.3E-95 T 22-04-2016 YE0544 657664219b62622a1a5c732630f9391d 569 Pfam PF16861 Carbamoyltransferase C-terminus 395 564 4.5E-70 T 22-04-2016 IPR031730 Carbamoyltransferase, C-terminal YE0544 657664219b62622a1a5c732630f9391d 569 Pfam PF02543 Carbamoyltransferase N-terminus 7 73 6.6E-11 T 22-04-2016 IPR003696 Carbamoyltransferase GO:0003824|GO:0009058 YE0544 657664219b62622a1a5c732630f9391d 569 Pfam PF02543 Carbamoyltransferase N-terminus 93 340 6.0E-24 T 22-04-2016 IPR003696 Carbamoyltransferase GO:0003824|GO:0009058 YE0544 657664219b62622a1a5c732630f9391d 569 SUPERFAMILY SSF53067 22 145 1.81E-8 T 22-04-2016 YE0544 657664219b62622a1a5c732630f9391d 569 SUPERFAMILY SSF53067 194 348 1.81E-8 T 22-04-2016 YE3627 65bf5530ad08c1987f9366820004baff 129 Pfam PF11604 Copper binding periplasmic protein CusF 62 125 3.1E-19 T 22-04-2016 IPR021647 Copper binding periplasmic protein CusF YE3837 0dee0f725211f4de9eda16cbc3d7765d 229 PANTHER PTHR30249:SF4 1 229 3.9E-132 T 22-04-2016 YE3837 0dee0f725211f4de9eda16cbc3d7765d 229 Pfam PF04172 LrgB-like family 14 225 6.7E-71 T 22-04-2016 IPR007300 CidB/LrgB family YE3837 0dee0f725211f4de9eda16cbc3d7765d 229 PANTHER PTHR30249 1 229 3.9E-132 T 22-04-2016 YE1584 2806e5639937f81d1dfe67918e0e8de8 711 Pfam PF13515 Fusaric acid resistance protein-like 407 526 6.9E-24 T 22-04-2016 YE1584 2806e5639937f81d1dfe67918e0e8de8 711 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 10 706 0.0 T 22-04-2016 IPR010019 Integral membrane protein, YccS YE1584 2806e5639937f81d1dfe67918e0e8de8 711 Pfam PF12805 FUSC-like inner membrane protein yccS 68 347 1.8E-110 T 22-04-2016 IPR032692 Integral membrane protein YccS, N-terminal YE1584 2806e5639937f81d1dfe67918e0e8de8 711 PANTHER PTHR30509 3 707 0.0 T 22-04-2016 YE1584 2806e5639937f81d1dfe67918e0e8de8 711 PANTHER PTHR30509:SF8 3 707 0.0 T 22-04-2016 YE1584 2806e5639937f81d1dfe67918e0e8de8 711 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 10 706 6.7E-289 T 22-04-2016 IPR010020 Integral membrane protein, YccS/YhfK YE0967 2e9493eb28d2ea8e711c814b6ff53dee 105 SUPERFAMILY SSF52794 4 103 1.86E-31 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 YE0967 2e9493eb28d2ea8e711c814b6ff53dee 105 PANTHER PTHR34581:SF2 4 105 9.3E-52 T 22-04-2016 YE0967 2e9493eb28d2ea8e711c814b6ff53dee 105 PANTHER PTHR34581 4 105 9.3E-52 T 22-04-2016 YE0967 2e9493eb28d2ea8e711c814b6ff53dee 105 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 94 1.1E-16 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 YE0967 2e9493eb28d2ea8e711c814b6ff53dee 105 Gene3D G3DSA:3.40.50.270 1 104 3.9E-35 T 22-04-2016 YE3002 3df8db9efbf3f38b5d434f174ab56eff 631 PANTHER PTHR30627:SF2 6 626 3.8E-281 T 22-04-2016 YE3002 3df8db9efbf3f38b5d434f174ab56eff 631 Gene3D G3DSA:3.90.1310.10 131 253 2.7E-39 T 22-04-2016 YE3002 3df8db9efbf3f38b5d434f174ab56eff 631 PANTHER PTHR30627 6 626 3.8E-281 T 22-04-2016 YE3002 3df8db9efbf3f38b5d434f174ab56eff 631 Pfam PF00905 Penicillin binding protein transpeptidase domain 273 607 1.1E-83 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 YE3002 3df8db9efbf3f38b5d434f174ab56eff 631 SUPERFAMILY SSF56519 57 254 7.98E-53 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 YE3002 3df8db9efbf3f38b5d434f174ab56eff 631 Gene3D G3DSA:3.40.710.10 254 610 1.3E-100 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YE3002 3df8db9efbf3f38b5d434f174ab56eff 631 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 20 610 4.2E-237 T 22-04-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 UniPathway: UPA00219 YE3002 3df8db9efbf3f38b5d434f174ab56eff 631 SUPERFAMILY SSF56601 255 610 2.47E-92 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YE3002 3df8db9efbf3f38b5d434f174ab56eff 631 Pfam PF03717 Penicillin-binding Protein dimerisation domain 65 240 1.6E-45 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 YE2603 123a5563199b35c70662537802466719 505 PIRSF PIRSF000538 1 489 5.5E-107 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 YE2603 123a5563199b35c70662537802466719 505 PANTHER PTHR10196 1 492 1.1E-108 T 22-04-2016 YE2603 123a5563199b35c70662537802466719 505 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 356 376 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 YE2603 123a5563199b35c70662537802466719 505 Gene3D G3DSA:3.30.420.40 1 249 2.1E-57 T 22-04-2016 YE2603 123a5563199b35c70662537802466719 505 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 259 439 1.8E-27 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 YE2603 123a5563199b35c70662537802466719 505 Gene3D G3DSA:3.30.420.40 252 484 1.2E-44 T 22-04-2016 YE2603 123a5563199b35c70662537802466719 505 SUPERFAMILY SSF53067 251 484 1.99E-49 T 22-04-2016 YE2603 123a5563199b35c70662537802466719 505 SUPERFAMILY SSF53067 1 249 1.46E-59 T 22-04-2016 YE2603 123a5563199b35c70662537802466719 505 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 249 2.5E-59 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 YE0932 aad0cc954d29270fca351206db2b7a6f 102 Pfam PF05957 Bacterial protein of unknown function (DUF883) 11 102 9.1E-29 T 22-04-2016 IPR010279 Protein of unknown function DUF883, ElaB YE0932 aad0cc954d29270fca351206db2b7a6f 102 PANTHER PTHR35893 19 102 5.7E-33 T 22-04-2016 YE0932 aad0cc954d29270fca351206db2b7a6f 102 PANTHER PTHR35893:SF2 19 102 5.7E-33 T 22-04-2016 YE1344 5da83125b5d387510305fd6f5b25f991 150 PANTHER PTHR11058:SF5 1 127 7.0E-73 T 22-04-2016 YE1344 5da83125b5d387510305fd6f5b25f991 150 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 7 124 19.967 T 22-04-2016 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 YE1344 5da83125b5d387510305fd6f5b25f991 150 PANTHER PTHR11058 1 127 7.0E-73 T 22-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 YE1344 5da83125b5d387510305fd6f5b25f991 150 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 27 123 1.3E-31 T 22-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 YE1533 c738051bcec17c2eb8d0e386f78a2145 285 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 168 178 - T 22-04-2016 IPR024002 Formate/nitrite transporter, conserved site YE1533 c738051bcec17c2eb8d0e386f78a2145 285 PANTHER PTHR30520:SF4 12 228 5.9E-103 T 22-04-2016 YE1533 c738051bcec17c2eb8d0e386f78a2145 285 PANTHER PTHR30520:SF4 245 281 5.9E-103 T 22-04-2016 YE1533 c738051bcec17c2eb8d0e386f78a2145 285 PANTHER PTHR30520 12 228 5.9E-103 T 22-04-2016 YE1533 c738051bcec17c2eb8d0e386f78a2145 285 PANTHER PTHR30520 245 281 5.9E-103 T 22-04-2016 YE1533 c738051bcec17c2eb8d0e386f78a2145 285 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 14 279 6.4E-130 T 22-04-2016 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 YE1533 c738051bcec17c2eb8d0e386f78a2145 285 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 83 92 - T 22-04-2016 IPR024002 Formate/nitrite transporter, conserved site YE1533 c738051bcec17c2eb8d0e386f78a2145 285 Pfam PF01226 Formate/nitrite transporter 15 276 1.1E-75 T 22-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 YE1533 c738051bcec17c2eb8d0e386f78a2145 285 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 26 280 3.0E-93 T 22-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 YE1533 c738051bcec17c2eb8d0e386f78a2145 285 Gene3D G3DSA:1.20.1080.10 29 280 1.9E-89 T 22-04-2016 IPR023271 Aquaporin-like YE0419 dead036fc3a26c259f7876fa50adbec6 85 Pfam PF01016 Ribosomal L27 protein 2 82 3.4E-38 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0419 dead036fc3a26c259f7876fa50adbec6 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 1.0E-17 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0419 dead036fc3a26c259f7876fa50adbec6 85 SUPERFAMILY SSF110324 2 79 1.05E-33 T 22-04-2016 YE0419 dead036fc3a26c259f7876fa50adbec6 85 Gene3D G3DSA:2.40.50.100 20 82 1.4E-30 T 22-04-2016 YE0419 dead036fc3a26c259f7876fa50adbec6 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 22-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0419 dead036fc3a26c259f7876fa50adbec6 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 28.818 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0419 dead036fc3a26c259f7876fa50adbec6 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 3.1E-42 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0419 dead036fc3a26c259f7876fa50adbec6 85 PANTHER PTHR15893 1 85 2.8E-51 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0419 dead036fc3a26c259f7876fa50adbec6 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 4.6E-38 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0419 dead036fc3a26c259f7876fa50adbec6 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 4.6E-38 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0419 dead036fc3a26c259f7876fa50adbec6 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 4.6E-38 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE4085 fcb04fb38b12c494ded413175b2d90b8 541 PIRSF PIRSF029745 33 541 1.2E-140 T 22-04-2016 IPR027282 Two partner secretion pathway transporter GO:0015031 YE4085 fcb04fb38b12c494ded413175b2d90b8 541 Gene3D G3DSA:2.40.160.50 166 541 6.8E-99 T 22-04-2016 YE4085 fcb04fb38b12c494ded413175b2d90b8 541 Pfam PF08479 POTRA domain, ShlB-type 60 135 1.1E-12 T 22-04-2016 IPR013686 Polypeptide-transport-associated, ShlB-type YE4085 fcb04fb38b12c494ded413175b2d90b8 541 PANTHER PTHR34597:SF2 53 541 1.2E-173 T 22-04-2016 YE4085 fcb04fb38b12c494ded413175b2d90b8 541 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 154 487 9.0E-24 T 22-04-2016 IPR005565 Haemolysin activator HlyB YE4085 fcb04fb38b12c494ded413175b2d90b8 541 PANTHER PTHR34597 53 541 1.2E-173 T 22-04-2016 YE4085 fcb04fb38b12c494ded413175b2d90b8 541 Gene3D G3DSA:3.10.20.310 55 135 1.3E-14 T 22-04-2016 YE2282 b548f546d799d792d3038b8f15ca63a8 511 PANTHER PTHR30029 10 511 7.1E-247 T 22-04-2016 YE2282 b548f546d799d792d3038b8f15ca63a8 511 PANTHER PTHR30029:SF2 10 511 7.1E-247 T 22-04-2016 YE2282 b548f546d799d792d3038b8f15ca63a8 511 Pfam PF04293 SpoVR like protein 20 451 1.2E-175 T 22-04-2016 IPR007390 Sporulation stage V, protein R YE3815 92d22f29143ef09f00755e14cdd20dc6 293 SUPERFAMILY SSF53335 42 290 9.39E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE3815 92d22f29143ef09f00755e14cdd20dc6 293 PANTHER PTHR18895 9 292 2.6E-173 T 22-04-2016 YE3815 92d22f29143ef09f00755e14cdd20dc6 293 PIRSF PIRSF000401 1 293 9.4E-91 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 YE3815 92d22f29143ef09f00755e14cdd20dc6 293 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 292 1.9E-101 T 22-04-2016 YE3815 92d22f29143ef09f00755e14cdd20dc6 293 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 292 32.384 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 YE3815 92d22f29143ef09f00755e14cdd20dc6 293 PANTHER PTHR18895:SF69 9 292 2.6E-173 T 22-04-2016 YE3815 92d22f29143ef09f00755e14cdd20dc6 293 Gene3D G3DSA:3.40.50.150 98 286 1.8E-40 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE3815 92d22f29143ef09f00755e14cdd20dc6 293 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 286 2.4E-117 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 YE2500 1228afe64f12aef79c26f696cb6509b8 335 Hamap MF_00313 Glutaminase [glsA]. 24 326 40.852 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 YE2500 1228afe64f12aef79c26f696cb6509b8 335 Gene3D G3DSA:3.40.710.10 23 326 3.3E-103 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YE2500 1228afe64f12aef79c26f696cb6509b8 335 Pfam PF04960 Glutaminase 42 326 8.4E-96 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 YE2500 1228afe64f12aef79c26f696cb6509b8 335 SUPERFAMILY SSF56601 25 326 5.13E-101 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YE2500 1228afe64f12aef79c26f696cb6509b8 335 PANTHER PTHR12544:SF31 10 334 5.0E-215 T 22-04-2016 YE2500 1228afe64f12aef79c26f696cb6509b8 335 PANTHER PTHR12544 10 334 5.0E-215 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 YE2500 1228afe64f12aef79c26f696cb6509b8 335 TIGRFAM TIGR03814 Gln_ase: glutaminase A 27 326 5.8E-101 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 YE0061 c80cc8a443e9a2ac19824984a36a392d 151 Gene3D G3DSA:2.70.40.10 5 150 7.8E-53 T 22-04-2016 IPR029054 dUTPase-like YE0061 c80cc8a443e9a2ac19824984a36a392d 151 Pfam PF00692 dUTPase 16 149 1.7E-41 T 22-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 YE0061 c80cc8a443e9a2ac19824984a36a392d 151 TIGRFAM TIGR00576 dut: dUTP diphosphatase 10 150 3.7E-48 T 22-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 YE0061 c80cc8a443e9a2ac19824984a36a392d 151 SUPERFAMILY SSF51283 1 150 1.57E-54 T 22-04-2016 IPR029054 dUTPase-like YE0061 c80cc8a443e9a2ac19824984a36a392d 151 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 6 150 34.075 T 22-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 YE0061 c80cc8a443e9a2ac19824984a36a392d 151 PANTHER PTHR11241 1 150 1.1E-55 T 22-04-2016 YE0297 d668855331003cb542688d7230c163e7 355 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 349 50.497 T 22-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YE0297 d668855331003cb542688d7230c163e7 355 PANTHER PTHR21091 1 350 3.5E-162 T 22-04-2016 YE0297 d668855331003cb542688d7230c163e7 355 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YE0297 d668855331003cb542688d7230c163e7 355 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YE0297 d668855331003cb542688d7230c163e7 355 Gene3D G3DSA:3.20.20.210 2 353 3.3E-156 T 22-04-2016 YE0297 d668855331003cb542688d7230c163e7 355 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 347 7.3E-142 T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YE0297 d668855331003cb542688d7230c163e7 355 SUPERFAMILY SSF51726 2 353 2.27E-120 T 22-04-2016 YE0297 d668855331003cb542688d7230c163e7 355 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 346 2.9E-136 T 22-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YE0297 d668855331003cb542688d7230c163e7 355 PANTHER PTHR21091:SF2 1 350 3.5E-162 T 22-04-2016 YE2961 ffde9c4871821e961495f56db1fd0be8 688 Pfam PF00122 E1-E2 ATPase 72 302 1.5E-40 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 YE2961 ffde9c4871821e961495f56db1fd0be8 688 SUPERFAMILY SSF81665 33 103 5.23E-10 T 22-04-2016 YE2961 ffde9c4871821e961495f56db1fd0be8 688 SUPERFAMILY SSF81665 208 305 5.23E-10 T 22-04-2016 YE2961 ffde9c4871821e961495f56db1fd0be8 688 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 378 610 5.4E-49 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 YE2961 ffde9c4871821e961495f56db1fd0be8 688 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 72 347 3.9E-34 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 YE2961 ffde9c4871821e961495f56db1fd0be8 688 PANTHER PTHR24093:SF49 8 593 0.0 T 22-04-2016 YE2961 ffde9c4871821e961495f56db1fd0be8 688 PANTHER PTHR24093:SF49 631 687 0.0 T 22-04-2016 YE2961 ffde9c4871821e961495f56db1fd0be8 688 Gene3D G3DSA:3.40.50.1000 450 569 4.4E-35 T 22-04-2016 IPR023214 HAD-like domain YE2961 ffde9c4871821e961495f56db1fd0be8 688 Pfam PF00702 haloacid dehalogenase-like hydrolase 307 536 9.5E-36 T 22-04-2016 YE2961 ffde9c4871821e961495f56db1fd0be8 688 Gene3D G3DSA:2.70.150.10 65 208 1.8E-23 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 YE2961 ffde9c4871821e961495f56db1fd0be8 688 Gene3D G3DSA:3.40.1110.10 322 449 8.5E-56 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 YE2961 ffde9c4871821e961495f56db1fd0be8 688 PANTHER PTHR24093 8 593 0.0 T 22-04-2016 YE2961 ffde9c4871821e961495f56db1fd0be8 688 PANTHER PTHR24093 631 687 0.0 T 22-04-2016 YE2961 ffde9c4871821e961495f56db1fd0be8 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 154 168 3.8E-24 T 22-04-2016 YE2961 ffde9c4871821e961495f56db1fd0be8 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 545 557 3.8E-24 T 22-04-2016 YE2961 ffde9c4871821e961495f56db1fd0be8 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 469 479 3.8E-24 T 22-04-2016 YE2961 ffde9c4871821e961495f56db1fd0be8 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 522 541 3.8E-24 T 22-04-2016 YE2961 ffde9c4871821e961495f56db1fd0be8 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 311 325 3.8E-24 T 22-04-2016 YE2961 ffde9c4871821e961495f56db1fd0be8 688 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 8 686 41.194 T 22-04-2016 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 YE2961 ffde9c4871821e961495f56db1fd0be8 688 SUPERFAMILY SSF81653 116 207 1.31E-20 T 22-04-2016 YE2961 ffde9c4871821e961495f56db1fd0be8 688 SUPERFAMILY SSF56784 383 565 1.55E-37 T 22-04-2016 IPR023214 HAD-like domain YE2961 ffde9c4871821e961495f56db1fd0be8 688 SUPERFAMILY SSF56784 299 323 1.55E-37 T 22-04-2016 IPR023214 HAD-like domain YE2961 ffde9c4871821e961495f56db1fd0be8 688 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 3 682 0.0 T 22-04-2016 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 YE2961 ffde9c4871821e961495f56db1fd0be8 688 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 313 319 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site YE0741 6a542e6c2c4769f5c9536cc5f6cf13e0 478 Pfam PF13365 Trypsin-like peptidase domain 116 252 9.0E-33 T 22-04-2016 YE0741 6a542e6c2c4769f5c9536cc5f6cf13e0 478 Gene3D G3DSA:2.40.10.10 180 292 5.3E-43 T 22-04-2016 YE0741 6a542e6c2c4769f5c9536cc5f6cf13e0 478 PANTHER PTHR22939:SF84 6 61 6.4E-263 T 22-04-2016 YE0741 6a542e6c2c4769f5c9536cc5f6cf13e0 478 PANTHER PTHR22939:SF84 82 90 6.4E-263 T 22-04-2016 YE0741 6a542e6c2c4769f5c9536cc5f6cf13e0 478 PANTHER PTHR22939:SF84 107 407 6.4E-263 T 22-04-2016 YE0741 6a542e6c2c4769f5c9536cc5f6cf13e0 478 SUPERFAMILY SSF50156 273 382 1.14E-21 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YE0741 6a542e6c2c4769f5c9536cc5f6cf13e0 478 SUPERFAMILY SSF50156 408 474 9.86E-16 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YE0741 6a542e6c2c4769f5c9536cc5f6cf13e0 478 Gene3D G3DSA:2.30.42.10 410 475 2.1E-19 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YE0741 6a542e6c2c4769f5c9536cc5f6cf13e0 478 PRINTS PR00834 HtrA/DegQ protease family signature 331 343 3.7E-60 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YE0741 6a542e6c2c4769f5c9536cc5f6cf13e0 478 PRINTS PR00834 HtrA/DegQ protease family signature 147 167 3.7E-60 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YE0741 6a542e6c2c4769f5c9536cc5f6cf13e0 478 PRINTS PR00834 HtrA/DegQ protease family signature 223 240 3.7E-60 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YE0741 6a542e6c2c4769f5c9536cc5f6cf13e0 478 PRINTS PR00834 HtrA/DegQ protease family signature 188 212 3.7E-60 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YE0741 6a542e6c2c4769f5c9536cc5f6cf13e0 478 PRINTS PR00834 HtrA/DegQ protease family signature 126 138 3.7E-60 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YE0741 6a542e6c2c4769f5c9536cc5f6cf13e0 478 PRINTS PR00834 HtrA/DegQ protease family signature 245 262 3.7E-60 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 YE0741 6a542e6c2c4769f5c9536cc5f6cf13e0 478 Gene3D G3DSA:2.40.10.10 38 179 7.4E-36 T 22-04-2016 YE0741 6a542e6c2c4769f5c9536cc5f6cf13e0 478 Gene3D G3DSA:2.30.42.10 293 390 1.6E-28 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YE0741 6a542e6c2c4769f5c9536cc5f6cf13e0 478 Pfam PF13180 PDZ domain 293 382 3.2E-14 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YE0741 6a542e6c2c4769f5c9536cc5f6cf13e0 478 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 40 476 1.2E-164 T 22-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 YE0741 6a542e6c2c4769f5c9536cc5f6cf13e0 478 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 397 467 3.2E-12 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YE0741 6a542e6c2c4769f5c9536cc5f6cf13e0 478 SUPERFAMILY SSF50494 1 59 1.66E-64 T 22-04-2016 IPR009003 Peptidase S1, PA clan YE0741 6a542e6c2c4769f5c9536cc5f6cf13e0 478 SUPERFAMILY SSF50494 113 300 1.66E-64 T 22-04-2016 IPR009003 Peptidase S1, PA clan YE0741 6a542e6c2c4769f5c9536cc5f6cf13e0 478 PANTHER PTHR22939 6 61 6.4E-263 T 22-04-2016 YE0741 6a542e6c2c4769f5c9536cc5f6cf13e0 478 PANTHER PTHR22939 82 90 6.4E-263 T 22-04-2016 YE0741 6a542e6c2c4769f5c9536cc5f6cf13e0 478 PANTHER PTHR22939 107 407 6.4E-263 T 22-04-2016 YE0741 6a542e6c2c4769f5c9536cc5f6cf13e0 478 SMART SM00228 291 373 7.3E-12 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YE0741 6a542e6c2c4769f5c9536cc5f6cf13e0 478 SMART SM00228 398 470 1.3E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YE1251 796c6705aa34b2e42483181c4376c7b5 264 PANTHER PTHR30204:SF5 1 257 1.1E-44 T 22-04-2016 YE1251 796c6705aa34b2e42483181c4376c7b5 264 Gene3D G3DSA:3.20.80.10 141 261 3.4E-12 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain YE1251 796c6705aa34b2e42483181c4376c7b5 264 Gene3D G3DSA:1.10.1660.10 3 122 2.7E-21 T 22-04-2016 YE1251 796c6705aa34b2e42483181c4376c7b5 264 Pfam PF13411 MerR HTH family regulatory protein 3 69 5.7E-16 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YE1251 796c6705aa34b2e42483181c4376c7b5 264 PANTHER PTHR30204 1 257 1.1E-44 T 22-04-2016 YE1251 796c6705aa34b2e42483181c4376c7b5 264 SUPERFAMILY SSF46955 3 114 4.76E-20 T 22-04-2016 IPR009061 Putative DNA-binding domain YE1251 796c6705aa34b2e42483181c4376c7b5 264 SMART SM00422 3 71 7.4E-12 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YE0984 2baa793d55a3dee18e8c212aef28a270 423 Pfam PF03432 Relaxase/Mobilisation nuclease domain 28 242 6.3E-12 T 22-04-2016 IPR005094 Endonuclease relaxase, MobA/VirD2 YE3489 676e55220b61ab7e0c2847f1bafe169c 82 TIGRFAM TIGR03758 conj_TIGR03758: integrating conjugative element protein, PFL_4701 family 5 82 7.5E-29 T 22-04-2016 IPR021676 Protein of unknown function DUF3262 YE3489 676e55220b61ab7e0c2847f1bafe169c 82 Pfam PF11660 Protein of unknown function (DUF3262) 4 80 3.0E-16 T 22-04-2016 IPR021676 Protein of unknown function DUF3262 YE3352 9a295ec0e593f7c678a74bcb46ce03da 251 SUPERFAMILY SSF53056 44 250 2.35E-51 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 YE3352 9a295ec0e593f7c678a74bcb46ce03da 251 SMART SM00947 91 251 1.3E-42 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 YE3352 9a295ec0e593f7c678a74bcb46ce03da 251 PANTHER PTHR11002 13 250 1.0E-159 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 YE3352 9a295ec0e593f7c678a74bcb46ce03da 251 PANTHER PTHR11002:SF22 13 250 1.0E-159 T 22-04-2016 YE3352 9a295ec0e593f7c678a74bcb46ce03da 251 Gene3D G3DSA:3.40.1050.10 42 250 4.4E-52 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 YE3352 9a295ec0e593f7c678a74bcb46ce03da 251 Pfam PF00484 Carbonic anhydrase 98 247 2.5E-35 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 YE0602 ef5826e573933233ebd4b5e61b66e5d1 429 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 97 111 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 YE0602 ef5826e573933233ebd4b5e61b66e5d1 429 PANTHER PTHR10314 53 427 1.2E-146 T 22-04-2016 YE0602 ef5826e573933233ebd4b5e61b66e5d1 429 PANTHER PTHR10314 25 36 1.2E-146 T 22-04-2016 YE0602 ef5826e573933233ebd4b5e61b66e5d1 429 Gene3D G3DSA:3.40.50.1100 321 401 8.0E-16 T 22-04-2016 YE0602 ef5826e573933233ebd4b5e61b66e5d1 429 Gene3D G3DSA:3.40.50.1100 196 319 3.2E-52 T 22-04-2016 YE0602 ef5826e573933233ebd4b5e61b66e5d1 429 Pfam PF14821 Threonine synthase N terminus 8 80 4.6E-11 T 22-04-2016 IPR029144 Threonine synthase, N-terminal YE0602 ef5826e573933233ebd4b5e61b66e5d1 429 SUPERFAMILY SSF53686 1 426 9.17E-134 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YE0602 ef5826e573933233ebd4b5e61b66e5d1 429 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 96 370 2.5E-24 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YE0602 ef5826e573933233ebd4b5e61b66e5d1 429 TIGRFAM TIGR00260 thrC: threonine synthase 52 396 9.3E-120 T 22-04-2016 IPR004450 Threonine synthase-like YE0602 ef5826e573933233ebd4b5e61b66e5d1 429 Gene3D G3DSA:3.90.1380.10 1 84 5.7E-20 T 22-04-2016 IPR029144 Threonine synthase, N-terminal YE0602 ef5826e573933233ebd4b5e61b66e5d1 429 PANTHER PTHR10314:SF1 53 427 1.2E-146 T 22-04-2016 YE0602 ef5826e573933233ebd4b5e61b66e5d1 429 PANTHER PTHR10314:SF1 25 36 1.2E-146 T 22-04-2016 YE0602 ef5826e573933233ebd4b5e61b66e5d1 429 Gene3D G3DSA:3.40.50.1100 106 195 2.5E-12 T 22-04-2016 YE3807 d1d0b5fef7e559ccbec378ad0d08afb8 325 Pfam PF00107 Zinc-binding dehydrogenase 158 270 3.2E-14 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 YE3807 d1d0b5fef7e559ccbec378ad0d08afb8 325 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 86 1.0E-4 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 YE3807 d1d0b5fef7e559ccbec378ad0d08afb8 325 SUPERFAMILY SSF51735 117 287 2.53E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3807 d1d0b5fef7e559ccbec378ad0d08afb8 325 Gene3D G3DSA:3.90.180.10 13 138 2.0E-7 T 22-04-2016 IPR011032 GroES-like YE3807 d1d0b5fef7e559ccbec378ad0d08afb8 325 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 2 324 6.2E-136 T 22-04-2016 IPR014188 Acrylyl-CoA reductase AcuI YE3807 d1d0b5fef7e559ccbec378ad0d08afb8 325 PANTHER PTHR11695 15 325 1.9E-174 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 YE3807 d1d0b5fef7e559ccbec378ad0d08afb8 325 PANTHER PTHR11695:SF13 15 325 1.9E-174 T 22-04-2016 IPR014188 Acrylyl-CoA reductase AcuI YE3807 d1d0b5fef7e559ccbec378ad0d08afb8 325 Gene3D G3DSA:3.40.50.720 139 290 3.3E-73 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3807 d1d0b5fef7e559ccbec378ad0d08afb8 325 SMART SM00829 11 322 0.0029 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 YE3807 d1d0b5fef7e559ccbec378ad0d08afb8 325 SUPERFAMILY SSF50129 1 144 1.32E-46 T 22-04-2016 IPR011032 GroES-like YE2723 23862ddabfb38acd9b9fa8817910af7f 215 Gene3D G3DSA:3.40.50.10230 3 209 1.4E-73 T 22-04-2016 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 YE2723 23862ddabfb38acd9b9fa8817910af7f 215 Pfam PF02570 Precorrin-8X methylmutase 9 204 1.1E-66 T 22-04-2016 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 YE2723 23862ddabfb38acd9b9fa8817910af7f 215 PANTHER PTHR32439 1 204 8.2E-65 T 22-04-2016 YE2723 23862ddabfb38acd9b9fa8817910af7f 215 SUPERFAMILY SSF63965 9 207 6.54E-64 T 22-04-2016 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 YE1245 f21e3946af3edecfc21e5b6e5035c39b 196 Pfam PF13977 Bacterial transcriptional repressor 91 190 4.0E-8 T 22-04-2016 YE1245 f21e3946af3edecfc21e5b6e5035c39b 196 PANTHER PTHR30055:SF30 4 184 6.1E-19 T 22-04-2016 YE1245 f21e3946af3edecfc21e5b6e5035c39b 196 SUPERFAMILY SSF48498 91 189 2.16E-16 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal YE1245 f21e3946af3edecfc21e5b6e5035c39b 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 51 1.8E-11 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YE1245 f21e3946af3edecfc21e5b6e5035c39b 196 SUPERFAMILY SSF46689 4 70 1.18E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE1245 f21e3946af3edecfc21e5b6e5035c39b 196 Gene3D G3DSA:1.10.357.10 5 188 1.8E-32 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 YE1245 f21e3946af3edecfc21e5b6e5035c39b 196 PANTHER PTHR30055 4 184 6.1E-19 T 22-04-2016 YE0641 b1683327537e676671e74c88580c040d 515 PANTHER PTHR30183:SF8 2 515 7.0E-292 T 22-04-2016 YE0641 b1683327537e676671e74c88580c040d 515 PANTHER PTHR30183 2 515 7.0E-292 T 22-04-2016 YE0641 b1683327537e676671e74c88580c040d 515 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 2 505 8.7E-239 T 22-04-2016 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 YE0641 b1683327537e676671e74c88580c040d 515 SUPERFAMILY SSF161098 6 244 3.79E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE0641 b1683327537e676671e74c88580c040d 515 Gene3D G3DSA:1.10.3720.10 273 512 1.6E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE0641 b1683327537e676671e74c88580c040d 515 Gene3D G3DSA:1.10.3720.10 21 246 9.0E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE0641 b1683327537e676671e74c88580c040d 515 SUPERFAMILY SSF161098 266 507 4.32E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE0641 b1683327537e676671e74c88580c040d 515 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 54 235 4.0E-11 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE2821 bfc1c4ac2e4e3b7c8c573937c9657e98 382 SMART SM00829 11 368 4.3E-4 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 YE2821 bfc1c4ac2e4e3b7c8c573937c9657e98 382 Pfam PF00107 Zinc-binding dehydrogenase 198 325 7.5E-24 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 YE2821 bfc1c4ac2e4e3b7c8c573937c9657e98 382 SUPERFAMILY SSF51735 161 335 4.8E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2821 bfc1c4ac2e4e3b7c8c573937c9657e98 382 PANTHER PTHR11695 16 109 2.9E-223 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 YE2821 bfc1c4ac2e4e3b7c8c573937c9657e98 382 PANTHER PTHR11695 129 379 2.9E-223 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 YE2821 bfc1c4ac2e4e3b7c8c573937c9657e98 382 Gene3D G3DSA:3.40.50.720 191 310 6.3E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2821 bfc1c4ac2e4e3b7c8c573937c9657e98 382 SUPERFAMILY SSF50129 319 370 2.26E-12 T 22-04-2016 IPR011032 GroES-like YE2821 bfc1c4ac2e4e3b7c8c573937c9657e98 382 PANTHER PTHR11695:SF560 16 109 2.9E-223 T 22-04-2016 YE2821 bfc1c4ac2e4e3b7c8c573937c9657e98 382 PANTHER PTHR11695:SF560 129 379 2.9E-223 T 22-04-2016 YE2821 bfc1c4ac2e4e3b7c8c573937c9657e98 382 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 YE2821 bfc1c4ac2e4e3b7c8c573937c9657e98 382 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 3 370 1.1E-224 T 22-04-2016 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00040+1.1.1.-|KEGG: 00051+1.1.1.-|KEGG: 00071+1.1.1.1|KEGG: 00140+1.1.1.-|KEGG: 00240+1.1.1.-|KEGG: 00253+1.1.1.-|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00362+1.1.1.-|KEGG: 00363+1.1.1.-|KEGG: 00365+1.1.1.-|KEGG: 00400+1.1.1.-|KEGG: 00520+1.1.1.-|KEGG: 00523+1.1.1.-|KEGG: 00591+1.1.1.-|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00622+1.1.1.-|KEGG: 00625+1.1.1.1+1.1.1.-|KEGG: 00626+1.1.1.1|KEGG: 00633+1.1.1.-|KEGG: 00640+1.1.1.-|KEGG: 00650+1.1.1.-|KEGG: 00680+1.1.1.284+1.1.1.-|KEGG: 00720+1.1.1.-|KEGG: 00750+1.1.1.-|KEGG: 00830+1.1.1.1+1.1.1.-|KEGG: 00950+1.1.1.-|KEGG: 00966+1.1.1.-|KEGG: 00980+1.1.1.1|KEGG: 00981+1.1.1.-|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 YE2821 bfc1c4ac2e4e3b7c8c573937c9657e98 382 SUPERFAMILY SSF50129 1 188 1.52E-73 T 22-04-2016 IPR011032 GroES-like YE2821 bfc1c4ac2e4e3b7c8c573937c9657e98 382 Gene3D G3DSA:3.90.180.10 2 190 5.6E-70 T 22-04-2016 IPR011032 GroES-like YE2821 bfc1c4ac2e4e3b7c8c573937c9657e98 382 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 127 6.7E-25 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 YE2831 698fe7bf677b3a0c8cd07488af500f61 531 PANTHER PTHR19211 2 527 0.0 T 22-04-2016 YE2831 698fe7bf677b3a0c8cd07488af500f61 531 Pfam PF00005 ABC transporter 336 467 1.1E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE2831 698fe7bf677b3a0c8cd07488af500f61 531 Pfam PF00005 ABC transporter 18 184 7.9E-18 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE2831 698fe7bf677b3a0c8cd07488af500f61 531 SMART SM00382 344 513 1.1E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YE2831 698fe7bf677b3a0c8cd07488af500f61 531 SMART SM00382 26 228 2.6E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YE2831 698fe7bf677b3a0c8cd07488af500f61 531 Gene3D G3DSA:3.40.50.300 4 100 7.6E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2831 698fe7bf677b3a0c8cd07488af500f61 531 Gene3D G3DSA:3.40.50.300 132 281 7.6E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2831 698fe7bf677b3a0c8cd07488af500f61 531 SUPERFAMILY SSF52540 6 237 4.11E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2831 698fe7bf677b3a0c8cd07488af500f61 531 SUPERFAMILY SSF52540 298 523 3.64E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2831 698fe7bf677b3a0c8cd07488af500f61 531 PANTHER PTHR19211:SF38 2 527 0.0 T 22-04-2016 YE2831 698fe7bf677b3a0c8cd07488af500f61 531 Gene3D G3DSA:3.40.50.300 318 528 3.2E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2831 698fe7bf677b3a0c8cd07488af500f61 531 Pfam PF12848 ABC transporter 224 309 3.5E-20 T 22-04-2016 IPR032781 ABC-transporter extension domain YE1892 c491c4f92853aefb4c4f1058be73b422 296 Gene3D G3DSA:3.40.190.10 214 253 1.8E-4 T 22-04-2016 YE1892 c491c4f92853aefb4c4f1058be73b422 296 Gene3D G3DSA:3.40.190.10 112 213 3.8E-4 T 22-04-2016 YE1892 c491c4f92853aefb4c4f1058be73b422 296 Pfam PF03466 LysR substrate binding domain 96 282 6.7E-12 T 22-04-2016 IPR005119 LysR, substrate-binding YE1892 c491c4f92853aefb4c4f1058be73b422 296 SUPERFAMILY SSF46785 8 88 2.64E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1892 c491c4f92853aefb4c4f1058be73b422 296 SUPERFAMILY SSF53850 104 281 5.04E-14 T 22-04-2016 YE1892 c491c4f92853aefb4c4f1058be73b422 296 PANTHER PTHR30579 1 294 5.6E-69 T 22-04-2016 YE1892 c491c4f92853aefb4c4f1058be73b422 296 PANTHER PTHR30579:SF0 1 294 5.6E-69 T 22-04-2016 YE1892 c491c4f92853aefb4c4f1058be73b422 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 2.0E-12 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE1892 c491c4f92853aefb4c4f1058be73b422 296 Gene3D G3DSA:1.10.10.10 7 85 1.2E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3101 36c38b9edb640e7dd1582282ae4edf20 1050 Gene3D G3DSA:3.30.70.1430 38 139 1.2E-35 T 22-04-2016 YE3101 36c38b9edb640e7dd1582282ae4edf20 1050 SUPERFAMILY SSF82866 296 497 6.54E-49 T 22-04-2016 YE3101 36c38b9edb640e7dd1582282ae4edf20 1050 SUPERFAMILY SSF82714 724 811 1.44E-20 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YE3101 36c38b9edb640e7dd1582282ae4edf20 1050 SUPERFAMILY SSF82693 135 182 4.19E-28 T 22-04-2016 YE3101 36c38b9edb640e7dd1582282ae4edf20 1050 SUPERFAMILY SSF82693 274 330 4.19E-28 T 22-04-2016 YE3101 36c38b9edb640e7dd1582282ae4edf20 1050 PANTHER PTHR32063:SF13 1 1048 0.0 T 22-04-2016 YE3101 36c38b9edb640e7dd1582282ae4edf20 1050 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1048 0.0 T 22-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 YE3101 36c38b9edb640e7dd1582282ae4edf20 1050 Gene3D G3DSA:3.30.2090.10 723 811 7.0E-26 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YE3101 36c38b9edb640e7dd1582282ae4edf20 1050 SUPERFAMILY SSF82714 182 272 3.66E-21 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YE3101 36c38b9edb640e7dd1582282ae4edf20 1050 Gene3D G3DSA:3.30.2090.10 181 275 2.5E-24 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YE3101 36c38b9edb640e7dd1582282ae4edf20 1050 SUPERFAMILY SSF82866 807 1032 4.71E-45 T 22-04-2016 YE3101 36c38b9edb640e7dd1582282ae4edf20 1050 Pfam PF00873 AcrB/AcrD/AcrF family 1 1029 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE3101 36c38b9edb640e7dd1582282ae4edf20 1050 Gene3D G3DSA:3.30.70.1430 568 670 1.5E-39 T 22-04-2016 YE3101 36c38b9edb640e7dd1582282ae4edf20 1050 SUPERFAMILY SSF82693 566 670 1.1E-32 T 22-04-2016 YE3101 36c38b9edb640e7dd1582282ae4edf20 1050 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 3.3E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE3101 36c38b9edb640e7dd1582282ae4edf20 1050 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 3.3E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE3101 36c38b9edb640e7dd1582282ae4edf20 1050 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 3.3E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE3101 36c38b9edb640e7dd1582282ae4edf20 1050 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 3.3E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE3101 36c38b9edb640e7dd1582282ae4edf20 1050 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 3.3E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE3101 36c38b9edb640e7dd1582282ae4edf20 1050 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 3.3E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE3101 36c38b9edb640e7dd1582282ae4edf20 1050 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 3.3E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE3101 36c38b9edb640e7dd1582282ae4edf20 1050 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 3.3E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE3101 36c38b9edb640e7dd1582282ae4edf20 1050 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 3.3E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE3101 36c38b9edb640e7dd1582282ae4edf20 1050 Gene3D G3DSA:1.10.3850.10 816 1030 7.3E-57 T 22-04-2016 YE3101 36c38b9edb640e7dd1582282ae4edf20 1050 Gene3D G3DSA:1.10.3850.10 278 498 2.9E-62 T 22-04-2016 YE3101 36c38b9edb640e7dd1582282ae4edf20 1050 SUPERFAMILY SSF82693 38 132 5.75E-27 T 22-04-2016 YE3101 36c38b9edb640e7dd1582282ae4edf20 1050 PANTHER PTHR32063 1 1048 0.0 T 22-04-2016 YE0269 df601ab7ff919f6a3af672324494319b 449 Gene3D G3DSA:3.90.230.10 161 445 3.0E-48 T 22-04-2016 IPR000994 Peptidase M24, structural domain YE0269 df601ab7ff919f6a3af672324494319b 449 PANTHER PTHR10804 1 446 9.8E-255 T 22-04-2016 YE0269 df601ab7ff919f6a3af672324494319b 449 Hamap MF_01279 Xaa-Pro dipeptidase [pepQ]. 1 449 57.714 T 22-04-2016 IPR022846 Xaa-Pro dipeptidase GO:0016795 YE0269 df601ab7ff919f6a3af672324494319b 449 SUPERFAMILY SSF55920 163 444 6.41E-52 T 22-04-2016 IPR000994 Peptidase M24, structural domain YE0269 df601ab7ff919f6a3af672324494319b 449 Pfam PF00557 Metallopeptidase family M24 168 436 1.6E-40 T 22-04-2016 IPR000994 Peptidase M24, structural domain YE0269 df601ab7ff919f6a3af672324494319b 449 PANTHER PTHR10804:SF101 1 446 9.8E-255 T 22-04-2016 YE0269 df601ab7ff919f6a3af672324494319b 449 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 341 353 - T 22-04-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site YE3069 12b9edfe869d4bf6c98f9e402d0fe208 434 Gene3D G3DSA:3.30.1110.10 45 95 1.5E-5 T 22-04-2016 YE3069 12b9edfe869d4bf6c98f9e402d0fe208 434 PANTHER PTHR10584 17 293 8.0E-207 T 22-04-2016 YE3069 12b9edfe869d4bf6c98f9e402d0fe208 434 PANTHER PTHR10584 332 376 8.0E-207 T 22-04-2016 YE3069 12b9edfe869d4bf6c98f9e402d0fe208 434 PANTHER PTHR10584 393 434 8.0E-207 T 22-04-2016 YE3069 12b9edfe869d4bf6c98f9e402d0fe208 434 SUPERFAMILY SSF53613 36 305 1.8E-43 T 22-04-2016 IPR029056 Ribokinase-like YE3069 12b9edfe869d4bf6c98f9e402d0fe208 434 SUPERFAMILY SSF53613 338 416 1.8E-43 T 22-04-2016 IPR029056 Ribokinase-like YE3069 12b9edfe869d4bf6c98f9e402d0fe208 434 PANTHER PTHR10584:SF202 17 293 8.0E-207 T 22-04-2016 YE3069 12b9edfe869d4bf6c98f9e402d0fe208 434 PANTHER PTHR10584:SF202 332 376 8.0E-207 T 22-04-2016 YE3069 12b9edfe869d4bf6c98f9e402d0fe208 434 PANTHER PTHR10584:SF202 393 434 8.0E-207 T 22-04-2016 YE3069 12b9edfe869d4bf6c98f9e402d0fe208 434 Pfam PF00294 pfkB family carbohydrate kinase 138 294 4.5E-8 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB YE3069 12b9edfe869d4bf6c98f9e402d0fe208 434 Gene3D G3DSA:3.40.1190.20 96 298 1.4E-46 T 22-04-2016 IPR029056 Ribokinase-like YE3069 12b9edfe869d4bf6c98f9e402d0fe208 434 Gene3D G3DSA:3.40.1190.20 337 434 1.4E-46 T 22-04-2016 IPR029056 Ribokinase-like YE0995 0ed4b09ce77321ae8d0b57e1e6f4f1ba 144 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 135 6.8E-34 T 22-04-2016 IPR005031 Coenzyme Q-binding protein COQ10, START domain YE0995 0ed4b09ce77321ae8d0b57e1e6f4f1ba 144 Gene3D G3DSA:3.30.530.20 1 142 5.5E-50 T 22-04-2016 IPR023393 START-like domain YE0995 0ed4b09ce77321ae8d0b57e1e6f4f1ba 144 PANTHER PTHR12901:SF7 1 142 8.5E-67 T 22-04-2016 YE0995 0ed4b09ce77321ae8d0b57e1e6f4f1ba 144 SUPERFAMILY SSF55961 1 142 4.02E-36 T 22-04-2016 YE0995 0ed4b09ce77321ae8d0b57e1e6f4f1ba 144 PANTHER PTHR12901 1 142 8.5E-67 T 22-04-2016 YE3367 84b700029ddbda0e9318fae8434f1b64 380 PANTHER PTHR13504:SF29 6 370 4.5E-158 T 22-04-2016 YE3367 84b700029ddbda0e9318fae8434f1b64 380 SUPERFAMILY SSF140931 87 270 9.81E-31 T 22-04-2016 IPR003812 Fido domain YE3367 84b700029ddbda0e9318fae8434f1b64 380 PANTHER PTHR13504 6 370 4.5E-158 T 22-04-2016 YE3367 84b700029ddbda0e9318fae8434f1b64 380 Pfam PF02661 Fic/DOC family 110 210 5.5E-18 T 22-04-2016 IPR003812 Fido domain YE3367 84b700029ddbda0e9318fae8434f1b64 380 Gene3D G3DSA:1.10.3290.10 29 273 3.2E-50 T 22-04-2016 IPR003812 Fido domain YE3097 bd2026fa1b4762a63d7e294b1748d515 1115 Gene3D G3DSA:2.30.30.60 920 969 2.8E-16 T 22-04-2016 YE3097 bd2026fa1b4762a63d7e294b1748d515 1115 SUPERFAMILY SSF82689 972 1072 4.32E-26 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 YE3097 bd2026fa1b4762a63d7e294b1748d515 1115 PANTHER PTHR30347:SF2 1 1093 0.0 T 22-04-2016 YE3097 bd2026fa1b4762a63d7e294b1748d515 1115 SUPERFAMILY SSF82861 820 903 1.14E-8 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 YE3097 bd2026fa1b4762a63d7e294b1748d515 1115 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 483 801 6.2E-101 T 22-04-2016 IPR025692 Mechanosensitive ion channel inner membrane domain 1 YE3097 bd2026fa1b4762a63d7e294b1748d515 1115 SUPERFAMILY SSF50182 905 970 4.9E-16 T 22-04-2016 IPR010920 LSM domain YE3097 bd2026fa1b4762a63d7e294b1748d515 1115 Pfam PF00924 Mechanosensitive ion channel 862 1061 5.1E-59 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 YE3097 bd2026fa1b4762a63d7e294b1748d515 1115 PANTHER PTHR30347 1 1093 0.0 T 22-04-2016 YE3097 bd2026fa1b4762a63d7e294b1748d515 1115 Gene3D G3DSA:3.30.70.100 975 1059 3.4E-23 T 22-04-2016 YE3097 bd2026fa1b4762a63d7e294b1748d515 1115 Pfam PF12795 Mechanosensitive ion channel porin domain 25 263 7.4E-63 T 22-04-2016 IPR024393 Mechanosensitive ion channel MscS, porin domain YE3845 b5915d78c9f830b21822da7ee79f2161 943 Gene3D G3DSA:1.20.1580.10 694 820 3.2E-55 T 22-04-2016 YE3845 b5915d78c9f830b21822da7ee79f2161 943 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 4 925 0.0 T 22-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 YE3845 b5915d78c9f830b21822da7ee79f2161 943 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE3845 b5915d78c9f830b21822da7ee79f2161 943 ProSitePatterns PS00211 ABC transporters family signature. 830 844 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE3845 b5915d78c9f830b21822da7ee79f2161 943 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 940 22.955 T 22-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 YE3845 b5915d78c9f830b21822da7ee79f2161 943 Gene3D G3DSA:3.40.50.300 2 51 5.7E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3845 b5915d78c9f830b21822da7ee79f2161 943 Gene3D G3DSA:3.40.50.300 618 670 2.0E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3845 b5915d78c9f830b21822da7ee79f2161 943 Gene3D G3DSA:3.40.50.300 478 596 5.7E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3845 b5915d78c9f830b21822da7ee79f2161 943 Gene3D G3DSA:3.40.50.300 821 940 2.0E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3845 b5915d78c9f830b21822da7ee79f2161 943 PANTHER PTHR32282:SF2 1 943 0.0 T 22-04-2016 YE3845 b5915d78c9f830b21822da7ee79f2161 943 Gene3D G3DSA:1.20.1580.10 407 477 2.5E-54 T 22-04-2016 YE3845 b5915d78c9f830b21822da7ee79f2161 943 Gene3D G3DSA:1.20.1580.10 91 129 2.5E-54 T 22-04-2016 YE3845 b5915d78c9f830b21822da7ee79f2161 943 Gene3D G3DSA:1.20.1580.10 251 284 2.5E-54 T 22-04-2016 YE3845 b5915d78c9f830b21822da7ee79f2161 943 PANTHER PTHR32282 1 943 0.0 T 22-04-2016 YE3845 b5915d78c9f830b21822da7ee79f2161 943 SUPERFAMILY SSF52540 615 911 2.66E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3845 b5915d78c9f830b21822da7ee79f2161 943 Gene3D G3DSA:3.30.1490.20 200 249 1.5E-27 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 YE3845 b5915d78c9f830b21822da7ee79f2161 943 Gene3D G3DSA:3.30.1490.20 130 153 1.5E-27 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 YE3845 b5915d78c9f830b21822da7ee79f2161 943 SUPERFAMILY SSF52540 1 204 2.86E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3845 b5915d78c9f830b21822da7ee79f2161 943 SUPERFAMILY SSF52540 430 569 2.86E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3845 b5915d78c9f830b21822da7ee79f2161 943 Gene3D G3DSA:1.10.8.280 286 406 2.6E-42 T 22-04-2016 YE0191 251f1bd1505a9a79f2ffc9d65452024d 67 Pfam PF13627 Prokaryotic lipoprotein-attachment site 11 29 4.7E-9 T 22-04-2016 IPR032831 Prokaryotic lipoprotein-attachment site YE3253 34f1d70020782b1f4d3dc966bff6f199 343 Pfam PF00005 ABC transporter 21 169 2.9E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE3253 34f1d70020782b1f4d3dc966bff6f199 343 PANTHER PTHR24220:SF455 3 303 2.0E-196 T 22-04-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 YE3253 34f1d70020782b1f4d3dc966bff6f199 343 Gene3D G3DSA:3.30.70.260 238 343 8.7E-31 T 22-04-2016 YE3253 34f1d70020782b1f4d3dc966bff6f199 343 Pfam PF09383 NIL domain 268 339 3.2E-18 T 22-04-2016 IPR018449 NIL domain YE3253 34f1d70020782b1f4d3dc966bff6f199 343 PANTHER PTHR24220 3 303 2.0E-196 T 22-04-2016 YE3253 34f1d70020782b1f4d3dc966bff6f199 343 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 6.6E-196 T 22-04-2016 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 YE3253 34f1d70020782b1f4d3dc966bff6f199 343 SMART SM00930 265 340 2.9E-24 T 22-04-2016 IPR018449 NIL domain YE3253 34f1d70020782b1f4d3dc966bff6f199 343 SUPERFAMILY SSF55021 248 343 1.04E-23 T 22-04-2016 YE3253 34f1d70020782b1f4d3dc966bff6f199 343 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE3253 34f1d70020782b1f4d3dc966bff6f199 343 Gene3D G3DSA:3.40.50.300 1 237 2.0E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3253 34f1d70020782b1f4d3dc966bff6f199 343 SMART SM00382 30 217 1.4E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain YE3253 34f1d70020782b1f4d3dc966bff6f199 343 SUPERFAMILY SSF52540 1 240 3.47E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1940 3d23ee027ef8265092ba771cafbeaf98 351 PANTHER PTHR30521 1 351 2.2E-177 T 22-04-2016 YE1940 3d23ee027ef8265092ba771cafbeaf98 351 Pfam PF04261 Dyp-type peroxidase family 1 338 1.5E-105 T 22-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- YE1940 3d23ee027ef8265092ba771cafbeaf98 351 PANTHER PTHR30521:SF4 1 351 2.2E-177 T 22-04-2016 YE1940 3d23ee027ef8265092ba771cafbeaf98 351 SUPERFAMILY SSF54909 3 344 5.18E-90 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel YE1940 3d23ee027ef8265092ba771cafbeaf98 351 TIGRFAM TIGR01412 tat_substr_1: Tat-translocated enzyme 1 350 2.2E-150 T 22-04-2016 IPR006313 Deferrochelatase/peroxidase EfeB GO:0004601|GO:0015684|GO:0020037|GO:0033212 KEGG: 00480+1.11.1.- YE1940 3d23ee027ef8265092ba771cafbeaf98 351 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 2 338 8.1E-96 T 22-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- YE3186 7d9265280f522a566dd8d47f926fbe38 303 Pfam PF04381 Putative exonuclease, RdgC 2 300 2.3E-130 T 22-04-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 YE3186 7d9265280f522a566dd8d47f926fbe38 303 PANTHER PTHR38103:SF1 3 303 4.4E-164 T 22-04-2016 YE3186 7d9265280f522a566dd8d47f926fbe38 303 PANTHER PTHR38103 3 303 4.4E-164 T 22-04-2016 YE3186 7d9265280f522a566dd8d47f926fbe38 303 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 2 302 42.078 T 22-04-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 YE3856 96782f0e7d542595f6b1f6c074df2734 122 PANTHER PTHR34299 1 122 2.4E-40 T 22-04-2016 YE3856 96782f0e7d542595f6b1f6c074df2734 122 Pfam PF01219 Prokaryotic diacylglycerol kinase 16 117 3.0E-35 T 22-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 YE3856 96782f0e7d542595f6b1f6c074df2734 122 PANTHER PTHR34299:SF1 1 122 2.4E-40 T 22-04-2016 YE3856 96782f0e7d542595f6b1f6c074df2734 122 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 70 81 - T 22-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 YE3856 96782f0e7d542595f6b1f6c074df2734 122 Gene3D G3DSA:1.10.3830.10 4 120 5.8E-45 T 22-04-2016 YE2600 5073b220c52ac3bc33a4da62208daf1f 441 ProSitePatterns PS00616 Histidine acid phosphatases phosphohistidine signature. 36 50 - T 22-04-2016 IPR033379 Histidine acid phosphatase active site YE2600 5073b220c52ac3bc33a4da62208daf1f 441 Gene3D G3DSA:3.40.50.1240 31 145 5.2E-74 T 22-04-2016 IPR029033 Histidine phosphatase superfamily YE2600 5073b220c52ac3bc33a4da62208daf1f 441 Gene3D G3DSA:3.40.50.1240 289 441 5.2E-74 T 22-04-2016 IPR029033 Histidine phosphatase superfamily YE2600 5073b220c52ac3bc33a4da62208daf1f 441 SUPERFAMILY SSF53254 30 438 7.4E-70 T 22-04-2016 IPR029033 Histidine phosphatase superfamily YE2600 5073b220c52ac3bc33a4da62208daf1f 441 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 35 381 2.9E-19 T 22-04-2016 IPR000560 Histidine phosphatase superfamily, clade-2 GO:0003993 YE2600 5073b220c52ac3bc33a4da62208daf1f 441 Gene3D G3DSA:3.40.50.1240 146 286 1.4E-42 T 22-04-2016 IPR029033 Histidine phosphatase superfamily YE2600 5073b220c52ac3bc33a4da62208daf1f 441 PANTHER PTHR41972 2 441 4.9E-189 T 22-04-2016 YE3128 5b8816d20212d35042ee73e7e1632441 135 SUPERFAMILY SSF54637 2 130 1.76E-37 T 22-04-2016 IPR029069 HotDog domain YE3128 5b8816d20212d35042ee73e7e1632441 135 Gene3D G3DSA:3.10.129.10 2 131 1.1E-41 T 22-04-2016 IPR029069 HotDog domain YE3128 5b8816d20212d35042ee73e7e1632441 135 PIRSF PIRSF003230 1 134 5.1E-22 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 YE3128 5b8816d20212d35042ee73e7e1632441 135 PANTHER PTHR31793 1 134 4.8E-93 T 22-04-2016 YE3128 5b8816d20212d35042ee73e7e1632441 135 Pfam PF13279 Thioesterase-like superfamily 12 126 8.0E-16 T 22-04-2016 YE3128 5b8816d20212d35042ee73e7e1632441 135 PANTHER PTHR31793:SF8 1 134 4.8E-93 T 22-04-2016 YE3128 5b8816d20212d35042ee73e7e1632441 135 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 6 118 5.8E-30 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 YE1547 f6835398e10456b8bfce80aea95167a4 69 SUPERFAMILY SSF50249 3 67 3.43E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE1547 f6835398e10456b8bfce80aea95167a4 69 Pfam PF00313 'Cold-shock' DNA-binding domain 6 67 1.7E-19 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YE1547 f6835398e10456b8bfce80aea95167a4 69 Gene3D G3DSA:2.40.50.140 5 67 3.1E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE1547 f6835398e10456b8bfce80aea95167a4 69 PRINTS PR00050 Cold shock protein signature 6 21 3.2E-11 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YE1547 f6835398e10456b8bfce80aea95167a4 69 PRINTS PR00050 Cold shock protein signature 27 36 3.2E-11 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YE1547 f6835398e10456b8bfce80aea95167a4 69 PRINTS PR00050 Cold shock protein signature 42 60 3.2E-11 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YE1547 f6835398e10456b8bfce80aea95167a4 69 PANTHER PTHR11544:SF65 1 68 4.0E-16 T 22-04-2016 YE1547 f6835398e10456b8bfce80aea95167a4 69 PANTHER PTHR11544 1 68 4.0E-16 T 22-04-2016 YE1547 f6835398e10456b8bfce80aea95167a4 69 PIRSF PIRSF002599 1 69 1.1E-17 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 YE1547 f6835398e10456b8bfce80aea95167a4 69 SMART SM00357 5 69 6.5E-12 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 YE3220 cc768b77179b13c97b8554f35603061f 447 Gene3D G3DSA:2.40.50.100 42 80 9.1E-4 T 22-04-2016 YE3220 cc768b77179b13c97b8554f35603061f 447 PANTHER PTHR37839:SF1 1 447 2.4E-228 T 22-04-2016 YE3220 cc768b77179b13c97b8554f35603061f 447 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 447 47.042 T 22-04-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 YE3220 cc768b77179b13c97b8554f35603061f 447 PANTHER PTHR37839 1 447 2.4E-228 T 22-04-2016 YE3220 cc768b77179b13c97b8554f35603061f 447 Pfam PF11973 NQRA C-terminal domain 262 310 1.9E-21 T 22-04-2016 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 YE3220 cc768b77179b13c97b8554f35603061f 447 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 447 5.0E-188 T 22-04-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 YE3220 cc768b77179b13c97b8554f35603061f 447 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 1 257 1.7E-118 T 22-04-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 YE2729 29274df2244f929df4b84af77c9ced4a 275 PIRSF PIRSF012290 43 275 1.1E-105 T 22-04-2016 IPR009193 Polyhedral organelle shell protein, EutL/PduB type GO:0009605 YE2729 29274df2244f929df4b84af77c9ced4a 275 SUPERFAMILY SSF143414 84 163 4.58E-10 T 22-04-2016 YE2729 29274df2244f929df4b84af77c9ced4a 275 SMART SM00877 190 267 1.4E-14 T 22-04-2016 IPR000249 Microcompartment protein, bacteria YE2729 29274df2244f929df4b84af77c9ced4a 275 SMART SM00877 84 166 2.3E-12 T 22-04-2016 IPR000249 Microcompartment protein, bacteria YE2729 29274df2244f929df4b84af77c9ced4a 275 PANTHER PTHR40609 44 275 4.6E-184 T 22-04-2016 YE2729 29274df2244f929df4b84af77c9ced4a 275 PANTHER PTHR40609:SF2 44 275 4.6E-184 T 22-04-2016 YE2729 29274df2244f929df4b84af77c9ced4a 275 SUPERFAMILY SSF143414 191 262 2.49E-11 T 22-04-2016 YE2729 29274df2244f929df4b84af77c9ced4a 275 TIGRFAM TIGR04501 microcomp_PduB: microcompartment protein PduB 51 275 2.1E-120 T 22-04-2016 IPR030984 Microcompartment protein PduB GO:0005198 YE2729 29274df2244f929df4b84af77c9ced4a 275 Pfam PF00936 BMC domain 85 159 2.7E-13 T 22-04-2016 IPR000249 Microcompartment protein, bacteria YE2729 29274df2244f929df4b84af77c9ced4a 275 Pfam PF00936 BMC domain 191 261 7.0E-14 T 22-04-2016 IPR000249 Microcompartment protein, bacteria YE2490 080a9ae81133a731f77645384933af17 104 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 19 93 5.5E-8 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 YE2490 080a9ae81133a731f77645384933af17 104 SUPERFAMILY SSF46626 11 97 1.04E-13 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 YE2490 080a9ae81133a731f77645384933af17 104 Gene3D G3DSA:1.10.760.10 4 98 6.9E-13 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 YE4128 7ee9b466e9aa611351f893a490ab6b5d 417 Pfam PF13657 HipA N-terminal domain 11 115 5.2E-16 T 22-04-2016 IPR017508 HipA, N-terminal subdomain 1 YE4128 7ee9b466e9aa611351f893a490ab6b5d 417 PANTHER PTHR37419 1 408 1.7E-14 T 22-04-2016 YE4128 7ee9b466e9aa611351f893a490ab6b5d 417 Pfam PF07804 HipA-like C-terminal domain 246 390 2.8E-27 T 22-04-2016 IPR012893 HipA-like, C-terminal YE4128 7ee9b466e9aa611351f893a490ab6b5d 417 Pfam PF07805 HipA-like N-terminal domain 150 241 1.2E-15 T 22-04-2016 IPR012894 HipA, N-terminal subdomain 2 YE4128 7ee9b466e9aa611351f893a490ab6b5d 417 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 12 114 9.3E-12 T 22-04-2016 IPR017508 HipA, N-terminal subdomain 1 YE1614 959f524cb3ba506b1a12f902bb3a427d 586 PANTHER PTHR24423 330 555 4.4E-33 T 22-04-2016 YE1614 959f524cb3ba506b1a12f902bb3a427d 586 SUPERFAMILY SSF53850 63 211 8.42E-12 T 22-04-2016 YE1614 959f524cb3ba506b1a12f902bb3a427d 586 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 24 256 3.7E-34 T 22-04-2016 YE1614 959f524cb3ba506b1a12f902bb3a427d 586 Gene3D G3DSA:3.40.190.10 115 215 7.8E-10 T 22-04-2016 YE1614 959f524cb3ba506b1a12f902bb3a427d 586 SMART SM00387 466 574 2.3E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE1614 959f524cb3ba506b1a12f902bb3a427d 586 Pfam PF00512 His Kinase A (phospho-acceptor) domain 354 414 2.8E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE1614 959f524cb3ba506b1a12f902bb3a427d 586 PRINTS PR00344 Bacterial sensor protein C-terminal signature 519 529 1.8E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE1614 959f524cb3ba506b1a12f902bb3a427d 586 PRINTS PR00344 Bacterial sensor protein C-terminal signature 530 548 1.8E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE1614 959f524cb3ba506b1a12f902bb3a427d 586 PRINTS PR00344 Bacterial sensor protein C-terminal signature 501 515 1.8E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE1614 959f524cb3ba506b1a12f902bb3a427d 586 Gene3D G3DSA:3.30.565.10 432 577 2.3E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE1614 959f524cb3ba506b1a12f902bb3a427d 586 SUPERFAMILY SSF55874 430 574 5.89E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE1614 959f524cb3ba506b1a12f902bb3a427d 586 PANTHER PTHR24423:SF359 330 555 4.4E-33 T 22-04-2016 YE1614 959f524cb3ba506b1a12f902bb3a427d 586 SUPERFAMILY SSF47384 345 417 3.14E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE1614 959f524cb3ba506b1a12f902bb3a427d 586 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 470 573 1.8E-10 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE0006 04776d545d0d2dac837e3d915506a386 502 Pfam PF07728 AAA domain (dynein-related subfamily) 41 171 1.3E-24 T 22-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 YE0006 04776d545d0d2dac837e3d915506a386 502 Hamap MF_01625 ATPase RavA [ravA]. 1 498 58.267 T 22-04-2016 IPR023671 ATPase RavA GO:0005737|GO:0016887 YE0006 04776d545d0d2dac837e3d915506a386 502 PANTHER PTHR32204 1 497 1.5E-143 T 22-04-2016 YE0006 04776d545d0d2dac837e3d915506a386 502 Pfam PF12592 Protein of unknown function (DUF3763) 444 497 4.7E-21 T 22-04-2016 IPR022547 ATPase, RavA, C-terminal GO:0016820 YE0006 04776d545d0d2dac837e3d915506a386 502 Gene3D G3DSA:3.40.50.300 25 184 4.4E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0006 04776d545d0d2dac837e3d915506a386 502 SMART SM00382 38 187 3.1E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain YE0006 04776d545d0d2dac837e3d915506a386 502 SUPERFAMILY SSF52540 21 289 2.34E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE4084 8b332d9625e487a99f4d26a08dc5a715 460 SMART SM00912 57 176 2.2E-28 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal YE4084 8b332d9625e487a99f4d26a08dc5a715 460 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 75 171 1.3E-16 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal YE4084 8b332d9625e487a99f4d26a08dc5a715 460 PANTHER PTHR32093 63 173 6.3E-18 T 22-04-2016 YE4084 8b332d9625e487a99f4d26a08dc5a715 460 Pfam PF05860 haemagglutination activity domain 55 173 4.1E-23 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal YE4084 8b332d9625e487a99f4d26a08dc5a715 460 SUPERFAMILY SSF51126 407 430 4.08E-37 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YE4084 8b332d9625e487a99f4d26a08dc5a715 460 SUPERFAMILY SSF51126 52 327 4.08E-37 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YE4084 8b332d9625e487a99f4d26a08dc5a715 460 Gene3D G3DSA:2.160.20.10 59 306 7.3E-60 T 22-04-2016 IPR012334 Pectin lyase fold YE4084 8b332d9625e487a99f4d26a08dc5a715 460 Gene3D G3DSA:2.160.20.10 386 419 7.3E-60 T 22-04-2016 IPR012334 Pectin lyase fold YE2125 b791fe35e18db890fc720b52ce25178f 557 Gene3D G3DSA:3.10.105.10 302 517 4.8E-60 T 22-04-2016 YE2125 b791fe35e18db890fc720b52ce25178f 557 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 88 466 6.1E-89 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain YE2125 b791fe35e18db890fc720b52ce25178f 557 SUPERFAMILY SSF53850 45 545 1.27E-139 T 22-04-2016 YE2125 b791fe35e18db890fc720b52ce25178f 557 PIRSF PIRSF002741 2 551 1.8E-101 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 YE2125 b791fe35e18db890fc720b52ce25178f 557 Gene3D G3DSA:3.90.76.10 54 232 7.4E-46 T 22-04-2016 YE2125 b791fe35e18db890fc720b52ce25178f 557 PANTHER PTHR30290 1 557 0.0 T 22-04-2016 YE2125 b791fe35e18db890fc720b52ce25178f 557 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 93 115 - T 22-04-2016 IPR023765 Solute-binding protein family 5, conserved site YE2125 b791fe35e18db890fc720b52ce25178f 557 PANTHER PTHR30290:SF28 1 557 0.0 T 22-04-2016 YE2842 d74d36af301c2979bc85ead883d083b4 258 Pfam PF13847 Methyltransferase domain 34 147 3.0E-13 T 22-04-2016 IPR025714 Methyltransferase domain YE2842 d74d36af301c2979bc85ead883d083b4 258 Gene3D G3DSA:3.40.50.150 3 188 1.4E-24 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE2842 d74d36af301c2979bc85ead883d083b4 258 SUPERFAMILY SSF53335 4 210 2.26E-31 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE2842 d74d36af301c2979bc85ead883d083b4 258 PANTHER PTHR10108 3 235 2.9E-92 T 22-04-2016 YE2842 d74d36af301c2979bc85ead883d083b4 258 PANTHER PTHR10108:SF890 3 235 2.9E-92 T 22-04-2016 YE2842 d74d36af301c2979bc85ead883d083b4 258 Hamap MF_00560 Trans-aconitate 2-methyltransferase [tam]. 2 257 43.657 T 22-04-2016 IPR023506 Trans-aconitate 2-methyltransferase GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 YE2842 d74d36af301c2979bc85ead883d083b4 258 Gene3D G3DSA:1.10.150.290 189 237 4.0E-30 T 22-04-2016 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 YE1437 207fdb22524747661a4e572f875096a5 247 PANTHER PTHR11751 1 106 8.7E-46 T 22-04-2016 YE1437 207fdb22524747661a4e572f875096a5 247 Pfam PF07729 FCD domain 90 216 8.0E-22 T 22-04-2016 IPR011711 GntR, C-terminal YE1437 207fdb22524747661a4e572f875096a5 247 SMART SM00345 7 66 2.8E-24 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YE1437 207fdb22524747661a4e572f875096a5 247 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 26 40 7.723873E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YE1437 207fdb22524747661a4e572f875096a5 247 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 56 7.723873E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YE1437 207fdb22524747661a4e572f875096a5 247 SMART SM00895 90 217 7.5E-22 T 22-04-2016 IPR011711 GntR, C-terminal YE1437 207fdb22524747661a4e572f875096a5 247 SUPERFAMILY SSF46785 2 70 6.81E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1437 207fdb22524747661a4e572f875096a5 247 PANTHER PTHR11751:SF389 1 106 8.7E-46 T 22-04-2016 YE1437 207fdb22524747661a4e572f875096a5 247 SUPERFAMILY SSF48008 88 224 5.49E-26 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal YE1437 207fdb22524747661a4e572f875096a5 247 Gene3D G3DSA:1.10.10.10 2 69 1.6E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1437 207fdb22524747661a4e572f875096a5 247 Gene3D G3DSA:1.20.120.530 89 227 2.5E-29 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal YE1437 207fdb22524747661a4e572f875096a5 247 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 2.2E-23 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 YE1855 16e40f437091ba7414e5f81f1f97f1a6 569 PANTHER PTHR24423 1 130 1.0E-39 T 22-04-2016 YE1855 16e40f437091ba7414e5f81f1f97f1a6 569 PANTHER PTHR24423 250 395 1.0E-39 T 22-04-2016 YE1855 16e40f437091ba7414e5f81f1f97f1a6 569 SUPERFAMILY SSF55785 145 244 6.56E-10 T 22-04-2016 IPR000014 PAS domain YE1855 16e40f437091ba7414e5f81f1f97f1a6 569 SUPERFAMILY SSF55073 403 563 9.42E-45 T 22-04-2016 IPR029787 Nucleotide cyclase YE1855 16e40f437091ba7414e5f81f1f97f1a6 569 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 262 387 9.6E-15 T 22-04-2016 IPR000014 PAS domain YE1855 16e40f437091ba7414e5f81f1f97f1a6 569 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 146 261 2.4E-8 T 22-04-2016 IPR000014 PAS domain YE1855 16e40f437091ba7414e5f81f1f97f1a6 569 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 19 132 2.6E-12 T 22-04-2016 IPR000014 PAS domain YE1855 16e40f437091ba7414e5f81f1f97f1a6 569 Pfam PF08447 PAS fold 289 374 1.3E-15 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 YE1855 16e40f437091ba7414e5f81f1f97f1a6 569 SUPERFAMILY SSF55785 9 131 1.14E-19 T 22-04-2016 IPR000014 PAS domain YE1855 16e40f437091ba7414e5f81f1f97f1a6 569 PANTHER PTHR24423:SF383 1 130 1.0E-39 T 22-04-2016 YE1855 16e40f437091ba7414e5f81f1f97f1a6 569 PANTHER PTHR24423:SF383 250 395 1.0E-39 T 22-04-2016 YE1855 16e40f437091ba7414e5f81f1f97f1a6 569 Pfam PF08448 PAS fold 152 255 3.3E-10 T 22-04-2016 IPR013656 PAS fold-4 YE1855 16e40f437091ba7414e5f81f1f97f1a6 569 Gene3D G3DSA:3.30.450.20 145 263 4.4E-15 T 22-04-2016 YE1855 16e40f437091ba7414e5f81f1f97f1a6 569 Gene3D G3DSA:3.30.450.20 264 377 2.9E-25 T 22-04-2016 YE1855 16e40f437091ba7414e5f81f1f97f1a6 569 SMART SM00267 387 565 4.5E-60 T 22-04-2016 IPR000160 GGDEF domain YE1855 16e40f437091ba7414e5f81f1f97f1a6 569 Gene3D G3DSA:3.30.70.270 399 564 4.7E-51 T 22-04-2016 YE1855 16e40f437091ba7414e5f81f1f97f1a6 569 Pfam PF00990 Diguanylate cyclase, GGDEF domain 398 561 3.9E-47 T 22-04-2016 IPR000160 GGDEF domain YE1855 16e40f437091ba7414e5f81f1f97f1a6 569 SMART SM00086 338 380 9.8E-4 T 22-04-2016 IPR001610 PAC motif YE1855 16e40f437091ba7414e5f81f1f97f1a6 569 SMART SM00086 93 135 0.066 T 22-04-2016 IPR001610 PAC motif YE1855 16e40f437091ba7414e5f81f1f97f1a6 569 SUPERFAMILY SSF55785 251 377 3.35E-23 T 22-04-2016 IPR000014 PAS domain YE1855 16e40f437091ba7414e5f81f1f97f1a6 569 SMART SM00091 266 332 1.4E-5 T 22-04-2016 IPR000014 PAS domain YE1855 16e40f437091ba7414e5f81f1f97f1a6 569 SMART SM00091 144 210 5.1 T 22-04-2016 IPR000014 PAS domain YE1855 16e40f437091ba7414e5f81f1f97f1a6 569 SMART SM00091 20 86 2.2E-7 T 22-04-2016 IPR000014 PAS domain YE1855 16e40f437091ba7414e5f81f1f97f1a6 569 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 394 564 7.2E-50 T 22-04-2016 IPR000160 GGDEF domain YE1855 16e40f437091ba7414e5f81f1f97f1a6 569 Pfam PF00989 PAS fold 22 125 1.9E-9 T 22-04-2016 IPR013767 PAS fold GO:0006355 YE1855 16e40f437091ba7414e5f81f1f97f1a6 569 Gene3D G3DSA:3.30.450.20 8 128 3.1E-19 T 22-04-2016 YE0099 552ec3c3d241c7dcd737988d4cf3f993 507 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 141 153 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 YE0099 552ec3c3d241c7dcd737988d4cf3f993 507 Gene3D G3DSA:3.30.420.40 8 259 1.7E-108 T 22-04-2016 YE0099 552ec3c3d241c7dcd737988d4cf3f993 507 SUPERFAMILY SSF53067 261 503 7.03E-87 T 22-04-2016 YE0099 552ec3c3d241c7dcd737988d4cf3f993 507 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 11 258 5.7E-92 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 YE0099 552ec3c3d241c7dcd737988d4cf3f993 507 Hamap MF_00186 Glycerol kinase [glpK]. 9 503 60.133 T 22-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 YE0099 552ec3c3d241c7dcd737988d4cf3f993 507 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 267 456 2.6E-63 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 YE0099 552ec3c3d241c7dcd737988d4cf3f993 507 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 10 502 4.1E-231 T 22-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 YE0099 552ec3c3d241c7dcd737988d4cf3f993 507 PANTHER PTHR10196:SF9 1 507 2.2E-271 T 22-04-2016 YE0099 552ec3c3d241c7dcd737988d4cf3f993 507 SUPERFAMILY SSF53067 10 261 8.64E-97 T 22-04-2016 YE0099 552ec3c3d241c7dcd737988d4cf3f993 507 PIRSF PIRSF000538 9 507 2.8E-181 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 YE0099 552ec3c3d241c7dcd737988d4cf3f993 507 PANTHER PTHR10196 1 507 2.2E-271 T 22-04-2016 YE0099 552ec3c3d241c7dcd737988d4cf3f993 507 Gene3D G3DSA:3.30.420.40 261 503 8.0E-106 T 22-04-2016 YE0099 552ec3c3d241c7dcd737988d4cf3f993 507 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 368 388 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 YE3178 4756e30e4063935cad4416772971050d 463 PANTHER PTHR11785:SF352 1 455 0.0 T 22-04-2016 YE3178 4756e30e4063935cad4416772971050d 463 PIRSF PIRSF006060 4 463 5.5E-72 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YE3178 4756e30e4063935cad4416772971050d 463 ProSitePatterns PS00218 Amino acid permeases signature. 42 72 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 YE3178 4756e30e4063935cad4416772971050d 463 Pfam PF00324 Amino acid permease 17 455 2.3E-109 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 YE3178 4756e30e4063935cad4416772971050d 463 PANTHER PTHR11785 1 455 0.0 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YE1572 199c1717bef57c3790982cbfd45f2510 637 SUPERFAMILY SSF52540 126 244 6.55E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1572 199c1717bef57c3790982cbfd45f2510 637 SUPERFAMILY SSF52540 4 94 6.55E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1572 199c1717bef57c3790982cbfd45f2510 637 Pfam PF00005 ABC transporter 19 185 1.0E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE1572 199c1717bef57c3790982cbfd45f2510 637 Pfam PF00005 ABC transporter 336 469 2.3E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE1572 199c1717bef57c3790982cbfd45f2510 637 SUPERFAMILY SSF52540 310 501 1.0E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1572 199c1717bef57c3790982cbfd45f2510 637 PANTHER PTHR19211 1 574 3.4E-236 T 22-04-2016 YE1572 199c1717bef57c3790982cbfd45f2510 637 SMART SM00382 28 230 4.8E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain YE1572 199c1717bef57c3790982cbfd45f2510 637 SMART SM00382 344 514 1.5E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain YE1572 199c1717bef57c3790982cbfd45f2510 637 PANTHER PTHR19211:SF45 1 574 3.4E-236 T 22-04-2016 YE1572 199c1717bef57c3790982cbfd45f2510 637 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE1572 199c1717bef57c3790982cbfd45f2510 637 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE1572 199c1717bef57c3790982cbfd45f2510 637 Pfam PF12848 ABC transporter 224 298 1.7E-9 T 22-04-2016 IPR032781 ABC-transporter extension domain YE1572 199c1717bef57c3790982cbfd45f2510 637 Pfam PF16326 ABC transporter C-terminal domain 564 633 3.5E-20 T 22-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 YE1572 199c1717bef57c3790982cbfd45f2510 637 Gene3D G3DSA:3.40.50.300 322 534 9.2E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1572 199c1717bef57c3790982cbfd45f2510 637 Gene3D G3DSA:3.40.50.300 136 282 1.4E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1572 199c1717bef57c3790982cbfd45f2510 637 Gene3D G3DSA:3.40.50.300 5 102 1.4E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1612 24b23522bddea1e39bf813cae0401d28 310 PANTHER PTHR30606 5 310 7.7E-164 T 22-04-2016 YE1612 24b23522bddea1e39bf813cae0401d28 310 PANTHER PTHR30606:SF5 5 310 7.7E-164 T 22-04-2016 YE1612 24b23522bddea1e39bf813cae0401d28 310 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 8 300 7.6E-103 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 YE1612 24b23522bddea1e39bf813cae0401d28 310 PIRSF PIRSF026649 5 309 4.2E-99 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 YE1612 24b23522bddea1e39bf813cae0401d28 310 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 7 309 52.458 T 22-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 YE1612 24b23522bddea1e39bf813cae0401d28 310 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 8 309 5.7E-144 T 22-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 YE0073 8f962abf7a33c7ca9555b5aef9099be0 403 PANTHER PTHR13693 12 402 1.5E-261 T 22-04-2016 YE0073 8f962abf7a33c7ca9555b5aef9099be0 403 SUPERFAMILY SSF53383 8 401 8.8E-127 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YE0073 8f962abf7a33c7ca9555b5aef9099be0 403 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 10 402 6.6E-219 T 22-04-2016 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|UniPathway: UPA00046 YE0073 8f962abf7a33c7ca9555b5aef9099be0 403 PANTHER PTHR13693:SF60 12 402 1.5E-261 T 22-04-2016 YE0073 8f962abf7a33c7ca9555b5aef9099be0 403 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 7 400 53.745 T 22-04-2016 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|UniPathway: UPA00046 YE0073 8f962abf7a33c7ca9555b5aef9099be0 403 Pfam PF00155 Aminotransferase class I and II 48 392 1.1E-78 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YE0073 8f962abf7a33c7ca9555b5aef9099be0 403 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 246 255 - T 22-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 YE0073 8f962abf7a33c7ca9555b5aef9099be0 403 Gene3D G3DSA:3.90.1150.10 284 397 8.2E-34 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YE0073 8f962abf7a33c7ca9555b5aef9099be0 403 Gene3D G3DSA:3.40.640.10 66 283 2.0E-89 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YE4103 58caa16f741888b858406af8b3b1d486 104 SUPERFAMILY SSF52794 1 102 5.23E-36 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 YE4103 58caa16f741888b858406af8b3b1d486 104 PANTHER PTHR34581 2 104 2.0E-39 T 22-04-2016 YE4103 58caa16f741888b858406af8b3b1d486 104 Gene3D G3DSA:3.40.50.270 1 103 9.4E-39 T 22-04-2016 YE4103 58caa16f741888b858406af8b3b1d486 104 PANTHER PTHR34581:SF2 2 104 2.0E-39 T 22-04-2016 YE4103 58caa16f741888b858406af8b3b1d486 104 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 94 1.3E-21 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 YE0196 163ec480bf40db454ba766803d53ab0d 720 SUPERFAMILY SSF52540 4 642 1.77E-182 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0196 163ec480bf40db454ba766803d53ab0d 720 PANTHER PTHR11070 4 718 6.6E-259 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 YE0196 163ec480bf40db454ba766803d53ab0d 720 Gene3D G3DSA:3.40.50.300 286 387 1.9E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0196 163ec480bf40db454ba766803d53ab0d 720 Gene3D G3DSA:3.40.50.300 552 642 1.9E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0196 163ec480bf40db454ba766803d53ab0d 720 PANTHER PTHR11070:SF7 4 718 6.6E-259 T 22-04-2016 YE0196 163ec480bf40db454ba766803d53ab0d 720 Gene3D G3DSA:1.10.10.160 114 190 3.9E-25 T 22-04-2016 IPR013986 DExx box DNA helicase domain YE0196 163ec480bf40db454ba766803d53ab0d 720 TIGRFAM TIGR01075 uvrD: DNA helicase II 6 718 0.0 T 22-04-2016 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 YE0196 163ec480bf40db454ba766803d53ab0d 720 Gene3D G3DSA:1.10.486.10 388 541 6.5E-51 T 22-04-2016 YE0196 163ec480bf40db454ba766803d53ab0d 720 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 271 6.4E-76 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 YE0196 163ec480bf40db454ba766803d53ab0d 720 Pfam PF13361 UvrD-like helicase C-terminal domain 277 616 2.3E-76 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 YE0196 163ec480bf40db454ba766803d53ab0d 720 Gene3D G3DSA:3.40.50.300 4 110 3.0E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0196 163ec480bf40db454ba766803d53ab0d 720 Gene3D G3DSA:3.40.50.300 191 285 3.0E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0835 1df9e5c7b2bddd01abd93eeaeb7ebaa1 61 Pfam PF02599 Global regulator protein family 1 52 2.6E-27 T 22-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 YE0835 1df9e5c7b2bddd01abd93eeaeb7ebaa1 61 PANTHER PTHR34984 1 61 1.3E-33 T 22-04-2016 YE0835 1df9e5c7b2bddd01abd93eeaeb7ebaa1 61 PANTHER PTHR34984:SF1 1 61 1.3E-33 T 22-04-2016 YE0835 1df9e5c7b2bddd01abd93eeaeb7ebaa1 61 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 59 1.3E-31 T 22-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 YE0835 1df9e5c7b2bddd01abd93eeaeb7ebaa1 61 Hamap MF_00167 Carbon storage regulator [csrA]. 1 61 20.462 T 22-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 YE0835 1df9e5c7b2bddd01abd93eeaeb7ebaa1 61 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 3.0E-20 T 22-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 YE0835 1df9e5c7b2bddd01abd93eeaeb7ebaa1 61 SUPERFAMILY SSF117130 1 54 3.66E-21 T 22-04-2016 YE3569 3816e53ff8d038b998bb4cb4f4004a9f 189 PRINTS PR00885 Bacterial general secretion pathway protein H signature 23 37 1.1E-10 T 22-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 YE3569 3816e53ff8d038b998bb4cb4f4004a9f 189 PRINTS PR00885 Bacterial general secretion pathway protein H signature 142 157 1.1E-10 T 22-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 YE3569 3816e53ff8d038b998bb4cb4f4004a9f 189 PRINTS PR00885 Bacterial general secretion pathway protein H signature 8 22 1.1E-10 T 22-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 YE3569 3816e53ff8d038b998bb4cb4f4004a9f 189 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 9 169 8.6E-15 T 22-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 YE3569 3816e53ff8d038b998bb4cb4f4004a9f 189 Pfam PF12019 Type II transport protein GspH 46 168 5.7E-5 T 22-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 YE3569 3816e53ff8d038b998bb4cb4f4004a9f 189 Gene3D G3DSA:3.55.40.10 41 165 7.7E-17 T 22-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 YE3569 3816e53ff8d038b998bb4cb4f4004a9f 189 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 26 4.2E-5 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site YE3569 3816e53ff8d038b998bb4cb4f4004a9f 189 Pfam PF07963 Prokaryotic N-terminal methylation motif 11 29 4.2E-5 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site YE3569 3816e53ff8d038b998bb4cb4f4004a9f 189 SUPERFAMILY SSF54523 13 103 2.35E-9 T 22-04-2016 YE2968 c3cc1a180a080ed69a076b0b3e724c5c 179 Gene3D G3DSA:1.20.1380.10 66 179 2.0E-53 T 22-04-2016 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 YE2968 c3cc1a180a080ed69a076b0b3e724c5c 179 Gene3D G3DSA:1.10.1220.10 1 40 6.8E-27 T 22-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 YE2968 c3cc1a180a080ed69a076b0b3e724c5c 179 Pfam PF03925 SeqA protein C-terminal domain 69 177 3.5E-48 T 22-04-2016 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 YE2968 c3cc1a180a080ed69a076b0b3e724c5c 179 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 179 42.081 T 22-04-2016 IPR005621 Negative modulator of initiation of replicationr SeqA GO:0003677|GO:0032297 YE2968 c3cc1a180a080ed69a076b0b3e724c5c 179 SUPERFAMILY SSF47598 1 35 7.67E-14 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 YE2968 c3cc1a180a080ed69a076b0b3e724c5c 179 SUPERFAMILY SSF82808 64 179 2.35E-48 T 22-04-2016 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 YE3753 462eee814d8490f8585a32794d8ae302 324 Pfam PF01699 Sodium/calcium exchanger protein 175 317 4.7E-27 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 YE3753 462eee814d8490f8585a32794d8ae302 324 Pfam PF01699 Sodium/calcium exchanger protein 5 144 7.3E-30 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 YE3753 462eee814d8490f8585a32794d8ae302 324 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 2 312 5.3E-89 T 22-04-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: REACT_15518 YE3753 462eee814d8490f8585a32794d8ae302 324 PANTHER PTHR10846 1 316 1.1E-87 T 22-04-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: REACT_15518 YE2930 f44f999ef3cc34a8ef23a62fb9a40c2e 269 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 149 266 6.0E-44 T 22-04-2016 IPR014162 Tol-Pal system, YbgF YE2930 f44f999ef3cc34a8ef23a62fb9a40c2e 269 Pfam PF13174 Tetratricopeptide repeat 224 256 1.6E-7 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 YE2930 f44f999ef3cc34a8ef23a62fb9a40c2e 269 Pfam PF16331 TolA binding protein trimerisation 37 109 6.2E-26 T 22-04-2016 IPR032519 YbgF, trimerisation domain GO:0070206 YE2930 f44f999ef3cc34a8ef23a62fb9a40c2e 269 PANTHER PTHR26312:SF74 160 266 1.1E-42 T 22-04-2016 YE2930 f44f999ef3cc34a8ef23a62fb9a40c2e 269 PANTHER PTHR26312 160 266 1.1E-42 T 22-04-2016 YE2930 f44f999ef3cc34a8ef23a62fb9a40c2e 269 Pfam PF13432 Tetratricopeptide repeat 156 220 3.5E-10 T 22-04-2016 YE2930 f44f999ef3cc34a8ef23a62fb9a40c2e 269 SUPERFAMILY SSF48452 158 262 2.59E-15 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YE2930 f44f999ef3cc34a8ef23a62fb9a40c2e 269 Gene3D G3DSA:1.25.40.10 158 257 4.5E-15 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YE0579 4987b34c6d211b77c85df39f95c6d383 461 SUPERFAMILY SSF54211 307 459 2.35E-42 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YE0579 4987b34c6d211b77c85df39f95c6d383 461 SUPERFAMILY SSF54211 259 273 2.35E-42 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YE0579 4987b34c6d211b77c85df39f95c6d383 461 PRINTS PR01874 DNA repair protein radA signature 11 35 1.2E-93 T 22-04-2016 YE0579 4987b34c6d211b77c85df39f95c6d383 461 PRINTS PR01874 DNA repair protein radA signature 252 278 1.2E-93 T 22-04-2016 YE0579 4987b34c6d211b77c85df39f95c6d383 461 PRINTS PR01874 DNA repair protein radA signature 87 115 1.2E-93 T 22-04-2016 YE0579 4987b34c6d211b77c85df39f95c6d383 461 PRINTS PR01874 DNA repair protein radA signature 326 349 1.2E-93 T 22-04-2016 YE0579 4987b34c6d211b77c85df39f95c6d383 461 PRINTS PR01874 DNA repair protein radA signature 128 145 1.2E-93 T 22-04-2016 YE0579 4987b34c6d211b77c85df39f95c6d383 461 PRINTS PR01874 DNA repair protein radA signature 178 202 1.2E-93 T 22-04-2016 YE0579 4987b34c6d211b77c85df39f95c6d383 461 PRINTS PR01874 DNA repair protein radA signature 217 245 1.2E-93 T 22-04-2016 YE0579 4987b34c6d211b77c85df39f95c6d383 461 SUPERFAMILY SSF52540 72 291 4.68E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0579 4987b34c6d211b77c85df39f95c6d383 461 Pfam PF13541 Subunit ChlI of Mg-chelatase 349 434 4.2E-9 T 22-04-2016 YE0579 4987b34c6d211b77c85df39f95c6d383 461 PANTHER PTHR32472 5 458 3.5E-227 T 22-04-2016 YE0579 4987b34c6d211b77c85df39f95c6d383 461 SMART SM00382 95 249 1.9E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain YE0579 4987b34c6d211b77c85df39f95c6d383 461 Gene3D G3DSA:3.40.50.300 63 281 1.1E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0579 4987b34c6d211b77c85df39f95c6d383 461 Gene3D G3DSA:3.30.230.10 289 458 6.9E-38 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YE0579 4987b34c6d211b77c85df39f95c6d383 461 Pfam PF13481 AAA domain 89 226 2.0E-13 T 22-04-2016 YE0579 4987b34c6d211b77c85df39f95c6d383 461 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 455 3.3E-231 T 22-04-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 YE0588 ec988bd29a8c246b7bdc8a78b63628e0 881 SUPERFAMILY SSF56784 314 334 3.34E-61 T 22-04-2016 IPR023214 HAD-like domain YE0588 ec988bd29a8c246b7bdc8a78b63628e0 881 SUPERFAMILY SSF56784 470 719 3.34E-61 T 22-04-2016 IPR023214 HAD-like domain YE0588 ec988bd29a8c246b7bdc8a78b63628e0 881 Gene3D G3DSA:2.70.150.10 11 47 2.0E-43 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 YE0588 ec988bd29a8c246b7bdc8a78b63628e0 881 Gene3D G3DSA:2.70.150.10 101 215 2.0E-43 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 YE0588 ec988bd29a8c246b7bdc8a78b63628e0 881 Pfam PF00690 Cation transporter/ATPase, N-terminus 1 62 4.3E-20 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal YE0588 ec988bd29a8c246b7bdc8a78b63628e0 881 PANTHER PTHR24093 10 879 0.0 T 22-04-2016 YE0588 ec988bd29a8c246b7bdc8a78b63628e0 881 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 318 324 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site YE0588 ec988bd29a8c246b7bdc8a78b63628e0 881 SUPERFAMILY SSF81660 323 519 9.16E-47 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 YE0588 ec988bd29a8c246b7bdc8a78b63628e0 881 Pfam PF00702 haloacid dehalogenase-like hydrolase 312 630 1.8E-23 T 22-04-2016 YE0588 ec988bd29a8c246b7bdc8a78b63628e0 881 Pfam PF00122 E1-E2 ATPase 73 307 1.7E-66 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 YE0588 ec988bd29a8c246b7bdc8a78b63628e0 881 Gene3D G3DSA:1.20.1110.10 48 100 2.2E-105 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain YE0588 ec988bd29a8c246b7bdc8a78b63628e0 881 Gene3D G3DSA:1.20.1110.10 585 873 2.2E-105 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain YE0588 ec988bd29a8c246b7bdc8a78b63628e0 881 PANTHER PTHR24093:SF254 10 879 0.0 T 22-04-2016 YE0588 ec988bd29a8c246b7bdc8a78b63628e0 881 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 640 652 1.1E-40 T 22-04-2016 YE0588 ec988bd29a8c246b7bdc8a78b63628e0 881 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 515 526 1.1E-40 T 22-04-2016 YE0588 ec988bd29a8c246b7bdc8a78b63628e0 881 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 153 167 1.1E-40 T 22-04-2016 YE0588 ec988bd29a8c246b7bdc8a78b63628e0 881 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 316 330 1.1E-40 T 22-04-2016 YE0588 ec988bd29a8c246b7bdc8a78b63628e0 881 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 616 635 1.1E-40 T 22-04-2016 YE0588 ec988bd29a8c246b7bdc8a78b63628e0 881 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 537 547 1.1E-40 T 22-04-2016 YE0588 ec988bd29a8c246b7bdc8a78b63628e0 881 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 584 706 1.7E-35 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 YE0588 ec988bd29a8c246b7bdc8a78b63628e0 881 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 75 337 5.2E-41 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 YE0588 ec988bd29a8c246b7bdc8a78b63628e0 881 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 588 604 2.4E-18 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 YE0588 ec988bd29a8c246b7bdc8a78b63628e0 881 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 616 632 2.4E-18 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 YE0588 ec988bd29a8c246b7bdc8a78b63628e0 881 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 648 673 2.4E-18 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 YE0588 ec988bd29a8c246b7bdc8a78b63628e0 881 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 473 491 2.4E-18 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 YE0588 ec988bd29a8c246b7bdc8a78b63628e0 881 Pfam PF00689 Cation transporting ATPase, C-terminus 701 872 2.7E-42 T 22-04-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal YE0588 ec988bd29a8c246b7bdc8a78b63628e0 881 SMART SM00831 1 68 1.1E-27 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal YE0588 ec988bd29a8c246b7bdc8a78b63628e0 881 Gene3D G3DSA:3.40.1110.10 306 522 1.9E-51 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 YE0588 ec988bd29a8c246b7bdc8a78b63628e0 881 SUPERFAMILY SSF81665 216 310 6.02E-118 T 22-04-2016 YE0588 ec988bd29a8c246b7bdc8a78b63628e0 881 SUPERFAMILY SSF81665 666 876 6.02E-118 T 22-04-2016 YE0588 ec988bd29a8c246b7bdc8a78b63628e0 881 SUPERFAMILY SSF81665 2 106 6.02E-118 T 22-04-2016 YE0588 ec988bd29a8c246b7bdc8a78b63628e0 881 SUPERFAMILY SSF81653 105 215 1.14E-30 T 22-04-2016 YE2372 d1763553d9fa81ad8fed94b0b38f106a 270 PANTHER PTHR13696 1 258 2.7E-97 T 22-04-2016 YE2372 d1763553d9fa81ad8fed94b0b38f106a 270 PANTHER PTHR13696:SF1 1 258 2.7E-97 T 22-04-2016 YE2372 d1763553d9fa81ad8fed94b0b38f106a 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 268 2.1E-111 T 22-04-2016 IPR010223 ATP binding protein MinD, bacterial-type GO:0000918|GO:0016887 YE2372 d1763553d9fa81ad8fed94b0b38f106a 270 Gene3D G3DSA:3.40.50.300 1 248 1.2E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2372 d1763553d9fa81ad8fed94b0b38f106a 270 SUPERFAMILY SSF52540 1 268 1.74E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2372 d1763553d9fa81ad8fed94b0b38f106a 270 PIRSF PIRSF003092 1 270 3.1E-98 T 22-04-2016 IPR025501 ATP binding protein MinD YE2372 d1763553d9fa81ad8fed94b0b38f106a 270 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 217 7.4E-28 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain YE2116 dd160aa4e3df22e5cac8e8dd66cb566c 152 Pfam PF08808 RES domain 3 148 1.6E-25 T 22-04-2016 IPR014914 RES domain YE2116 dd160aa4e3df22e5cac8e8dd66cb566c 152 SMART SM00953 15 140 1.8E-29 T 22-04-2016 IPR014914 RES domain YE4086 d64fcde26b1c454f0cac23b5de3948ac 370 PANTHER PTHR32093 1 344 7.6E-21 T 22-04-2016 YE4086 d64fcde26b1c454f0cac23b5de3948ac 370 Gene3D G3DSA:2.160.20.10 67 317 2.2E-61 T 22-04-2016 IPR012334 Pectin lyase fold YE4086 d64fcde26b1c454f0cac23b5de3948ac 370 SUPERFAMILY SSF51126 65 312 2.04E-40 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YE4086 d64fcde26b1c454f0cac23b5de3948ac 370 SMART SM00912 68 181 2.2E-26 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal YE4086 d64fcde26b1c454f0cac23b5de3948ac 370 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 84 175 1.8E-15 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal YE4086 d64fcde26b1c454f0cac23b5de3948ac 370 Pfam PF05860 haemagglutination activity domain 69 179 3.0E-21 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal YE4086 d64fcde26b1c454f0cac23b5de3948ac 370 PANTHER PTHR32093:SF41 1 344 7.6E-21 T 22-04-2016 YE3897 f6910a6ed93f4c8642971b5d7ef5abd9 129 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 27.022 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3897 f6910a6ed93f4c8642971b5d7ef5abd9 129 SUPERFAMILY SSF64263 1 118 4.71E-51 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3897 f6910a6ed93f4c8642971b5d7ef5abd9 129 Pfam PF01196 Ribosomal protein L17 20 116 1.2E-34 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3897 f6910a6ed93f4c8642971b5d7ef5abd9 129 PANTHER PTHR14413 1 118 6.7E-68 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3897 f6910a6ed93f4c8642971b5d7ef5abd9 129 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3897 f6910a6ed93f4c8642971b5d7ef5abd9 129 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 7.1E-51 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3897 f6910a6ed93f4c8642971b5d7ef5abd9 129 Gene3D G3DSA:3.90.1030.10 1 117 2.6E-51 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0634 8b33a47abb3c7d28ff85c24c68923d43 250 PRINTS PR00625 DnaJ domain signature 228 248 1.4E-6 T 22-04-2016 IPR001623 DnaJ domain YE0634 8b33a47abb3c7d28ff85c24c68923d43 250 PRINTS PR00625 DnaJ domain signature 186 204 1.4E-6 T 22-04-2016 IPR001623 DnaJ domain YE0634 8b33a47abb3c7d28ff85c24c68923d43 250 PRINTS PR00625 DnaJ domain signature 204 219 1.4E-6 T 22-04-2016 IPR001623 DnaJ domain YE0634 8b33a47abb3c7d28ff85c24c68923d43 250 SUPERFAMILY SSF46565 106 246 1.78E-27 T 22-04-2016 IPR001623 DnaJ domain YE0634 8b33a47abb3c7d28ff85c24c68923d43 250 Pfam PF05099 Tellurite resistance protein TerB 20 145 1.9E-11 T 22-04-2016 IPR007791 Co-chaperone DjlA, N-terminal YE0634 8b33a47abb3c7d28ff85c24c68923d43 250 Gene3D G3DSA:1.10.287.110 188 246 8.4E-13 T 22-04-2016 IPR001623 DnaJ domain YE0634 8b33a47abb3c7d28ff85c24c68923d43 250 SMART SM00271 183 248 5.7E-16 T 22-04-2016 IPR001623 DnaJ domain YE0634 8b33a47abb3c7d28ff85c24c68923d43 250 Pfam PF00226 DnaJ domain 187 246 7.6E-10 T 22-04-2016 IPR001623 DnaJ domain YE0634 8b33a47abb3c7d28ff85c24c68923d43 250 Gene3D G3DSA:1.10.3680.10 5 187 1.3E-28 T 22-04-2016 IPR029024 TerB-like YE3246 4d19914afd6c3a54b9ac797b2016d5a0 249 PANTHER PTHR21392:SF1 14 248 2.2E-123 T 22-04-2016 YE3246 4d19914afd6c3a54b9ac797b2016d5a0 249 PANTHER PTHR21392 14 248 2.2E-123 T 22-04-2016 YE3246 4d19914afd6c3a54b9ac797b2016d5a0 249 SMART SM01144 42 234 2.4E-74 T 22-04-2016 IPR005636 DTW YE3246 4d19914afd6c3a54b9ac797b2016d5a0 249 Pfam PF03942 DTW domain 45 229 8.8E-44 T 22-04-2016 IPR005636 DTW YE0357 ec99c51f7cd3cc337fdc8b5dd681da85 188 PIRSF PIRSF005901 2 188 5.8E-67 T 22-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 YE0357 ec99c51f7cd3cc337fdc8b5dd681da85 188 Gene3D G3DSA:2.30.30.30 6 65 9.0E-26 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 YE0357 ec99c51f7cd3cc337fdc8b5dd681da85 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 50.091 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 YE0357 ec99c51f7cd3cc337fdc8b5dd681da85 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 72 123 1.0E-22 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 YE0357 ec99c51f7cd3cc337fdc8b5dd681da85 188 SMART SM01185 69 123 7.5E-26 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 YE0357 ec99c51f7cd3cc337fdc8b5dd681da85 188 SUPERFAMILY SSF50249 130 187 1.88E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE0357 ec99c51f7cd3cc337fdc8b5dd681da85 188 TIGRFAM TIGR00038 efp: translation elongation factor P 6 187 1.1E-76 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 YE0357 ec99c51f7cd3cc337fdc8b5dd681da85 188 Gene3D G3DSA:2.40.50.140 130 187 1.1E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE0357 ec99c51f7cd3cc337fdc8b5dd681da85 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 1.0E-25 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 YE0357 ec99c51f7cd3cc337fdc8b5dd681da85 188 PANTHER PTHR30053 1 188 4.7E-96 T 22-04-2016 YE0357 ec99c51f7cd3cc337fdc8b5dd681da85 188 Gene3D G3DSA:2.40.50.140 67 129 4.4E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE0357 ec99c51f7cd3cc337fdc8b5dd681da85 188 SMART SM00841 131 186 3.0E-32 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 YE0357 ec99c51f7cd3cc337fdc8b5dd681da85 188 SUPERFAMILY SSF50104 6 64 5.78E-18 T 22-04-2016 IPR008991 Translation protein SH3-like domain YE0357 ec99c51f7cd3cc337fdc8b5dd681da85 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 7 62 7.5E-24 T 22-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 YE0357 ec99c51f7cd3cc337fdc8b5dd681da85 188 SUPERFAMILY SSF50249 67 128 7.71E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE0357 ec99c51f7cd3cc337fdc8b5dd681da85 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 22-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 YE2062 6e997da9b9930fd5e945864c336f8812 224 PANTHER PTHR12725 1 222 9.1E-51 T 22-04-2016 YE2062 6e997da9b9930fd5e945864c336f8812 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 8.2E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YE2062 6e997da9b9930fd5e945864c336f8812 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 8.2E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YE2062 6e997da9b9930fd5e945864c336f8812 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 8.2E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YE2062 6e997da9b9930fd5e945864c336f8812 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 184 197 8.2E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YE2062 6e997da9b9930fd5e945864c336f8812 224 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 56 195 4.9E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YE2062 6e997da9b9930fd5e945864c336f8812 224 Gene3D G3DSA:3.40.50.1000 93 222 3.3E-41 T 22-04-2016 IPR023214 HAD-like domain YE2062 6e997da9b9930fd5e945864c336f8812 224 Gene3D G3DSA:1.10.150.240 15 92 8.4E-21 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 YE2062 6e997da9b9930fd5e945864c336f8812 224 PANTHER PTHR12725:SF57 1 222 9.1E-51 T 22-04-2016 YE2062 6e997da9b9930fd5e945864c336f8812 224 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 97 189 3.9E-14 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YE2062 6e997da9b9930fd5e945864c336f8812 224 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 3 221 8.6E-75 T 22-04-2016 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 YE2062 6e997da9b9930fd5e945864c336f8812 224 SUPERFAMILY SSF56784 2 222 1.68E-47 T 22-04-2016 IPR023214 HAD-like domain YE2062 6e997da9b9930fd5e945864c336f8812 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 194 5.7E-20 T 22-04-2016 IPR023214 HAD-like domain YE1821 d9e60c9de6102090fff6b367705409ac 96 Gene3D G3DSA:3.30.420.10 2 80 1.4E-12 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE1821 d9e60c9de6102090fff6b367705409ac 96 PANTHER PTHR32552 1 89 5.8E-22 T 22-04-2016 YE1821 d9e60c9de6102090fff6b367705409ac 96 Pfam PF13333 Integrase core domain 33 87 2.8E-25 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YE1821 d9e60c9de6102090fff6b367705409ac 96 SUPERFAMILY SSF53098 2 82 1.71E-12 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE4190 10e4980ccb8fb195a7a1a6c4ae0980b9 251 PANTHER PTHR30614:SF5 1 229 2.6E-151 T 22-04-2016 YE4190 10e4980ccb8fb195a7a1a6c4ae0980b9 251 SUPERFAMILY SSF161098 22 212 5.76E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE4190 10e4980ccb8fb195a7a1a6c4ae0980b9 251 PANTHER PTHR30614 1 229 2.6E-151 T 22-04-2016 YE4190 10e4980ccb8fb195a7a1a6c4ae0980b9 251 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 221 9.5E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE4190 10e4980ccb8fb195a7a1a6c4ae0980b9 251 Gene3D G3DSA:1.10.3720.10 25 223 1.3E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE4190 10e4980ccb8fb195a7a1a6c4ae0980b9 251 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 25 116 3.6E-16 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 YE2946 8bb0420ed67512f86102a33ebef263c7 588 SUPERFAMILY SSF56425 236 356 6.58E-42 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain YE2946 8bb0420ed67512f86102a33ebef263c7 588 SUPERFAMILY SSF46977 452 588 8.9E-45 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 YE2946 8bb0420ed67512f86102a33ebef263c7 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 588 1.2E-34 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 YE2946 8bb0420ed67512f86102a33ebef263c7 588 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 588 2.0E-241 T 22-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 YE2946 8bb0420ed67512f86102a33ebef263c7 588 PIRSF PIRSF000171 1 580 4.3E-46 T 22-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit YE2946 8bb0420ed67512f86102a33ebef263c7 588 SUPERFAMILY SSF51905 4 259 2.09E-76 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE2946 8bb0420ed67512f86102a33ebef263c7 588 SUPERFAMILY SSF51905 359 441 2.09E-76 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE2946 8bb0420ed67512f86102a33ebef263c7 588 Gene3D G3DSA:4.10.80.40 548 588 1.8E-20 T 22-04-2016 YE2946 8bb0420ed67512f86102a33ebef263c7 588 PANTHER PTHR11632:SF5 1 573 0.0 T 22-04-2016 YE2946 8bb0420ed67512f86102a33ebef263c7 588 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 588 2.4E-275 T 22-04-2016 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 YE2946 8bb0420ed67512f86102a33ebef263c7 588 Gene3D G3DSA:1.20.58.100 433 547 3.0E-36 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 YE2946 8bb0420ed67512f86102a33ebef263c7 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 22-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 YE2946 8bb0420ed67512f86102a33ebef263c7 588 Gene3D G3DSA:3.90.700.10 243 349 4.5E-40 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain YE2946 8bb0420ed67512f86102a33ebef263c7 588 Gene3D G3DSA:3.50.50.60 6 242 8.5E-120 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE2946 8bb0420ed67512f86102a33ebef263c7 588 Gene3D G3DSA:3.50.50.60 351 425 8.5E-120 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE2946 8bb0420ed67512f86102a33ebef263c7 588 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 368 390 7.0E-5 T 22-04-2016 YE2946 8bb0420ed67512f86102a33ebef263c7 588 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 7.0E-5 T 22-04-2016 YE2946 8bb0420ed67512f86102a33ebef263c7 588 PANTHER PTHR11632 1 573 0.0 T 22-04-2016 YE2946 8bb0420ed67512f86102a33ebef263c7 588 Pfam PF00890 FAD binding domain 9 405 7.5E-117 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain YE3540 71cb2cf12c901f4b21894dd81750b2ba 266 Pfam PF01311 Bacterial export proteins, family 1 21 242 3.7E-46 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YE3540 71cb2cf12c901f4b21894dd81750b2ba 266 TIGRFAM TIGR01401 fliR_like_III: type III secretion apparatus protein SpaR/YscT/HrcT 14 261 1.5E-89 T 22-04-2016 IPR006304 Type III secretion protein SpaR/YscT GO:0006810|GO:0016021 YE3540 71cb2cf12c901f4b21894dd81750b2ba 266 PANTHER PTHR30065 9 254 4.3E-45 T 22-04-2016 YE3540 71cb2cf12c901f4b21894dd81750b2ba 266 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 187 209 2.3E-23 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YE3540 71cb2cf12c901f4b21894dd81750b2ba 266 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 209 228 2.3E-23 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YE3540 71cb2cf12c901f4b21894dd81750b2ba 266 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 88 107 2.3E-23 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YE3540 71cb2cf12c901f4b21894dd81750b2ba 266 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 29 50 2.3E-23 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 YE1559 d4a15a4e5fa04cda0564b67aaa2b297c 215 SMART SM00849 12 192 3.4E-43 T 22-04-2016 IPR001279 Metallo-beta-lactamase YE1559 d4a15a4e5fa04cda0564b67aaa2b297c 215 Gene3D G3DSA:3.60.15.10 2 210 3.0E-64 T 22-04-2016 IPR001279 Metallo-beta-lactamase YE1559 d4a15a4e5fa04cda0564b67aaa2b297c 215 PANTHER PTHR11935 1 211 7.7E-136 T 22-04-2016 YE1559 d4a15a4e5fa04cda0564b67aaa2b297c 215 PANTHER PTHR11935:SF115 1 211 7.7E-136 T 22-04-2016 YE1559 d4a15a4e5fa04cda0564b67aaa2b297c 215 SUPERFAMILY SSF56281 2 209 3.01E-61 T 22-04-2016 IPR001279 Metallo-beta-lactamase YE1559 d4a15a4e5fa04cda0564b67aaa2b297c 215 Pfam PF00753 Metallo-beta-lactamase superfamily 10 192 1.3E-32 T 22-04-2016 IPR001279 Metallo-beta-lactamase YE0264 d954f21d49f8a942c92c27a0d0149d9c 162 PANTHER PTHR30265:SF3 1 161 3.2E-31 T 22-04-2016 YE0264 d954f21d49f8a942c92c27a0d0149d9c 162 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 1 162 46.075 T 22-04-2016 IPR010215 Transcription antitermination protein RfaH GO:0006355 YE0264 d954f21d49f8a942c92c27a0d0149d9c 162 SUPERFAMILY SSF82679 1 100 9.94E-26 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 YE0264 d954f21d49f8a942c92c27a0d0149d9c 162 SMART SM00738 1 100 5.0E-27 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 YE0264 d954f21d49f8a942c92c27a0d0149d9c 162 PANTHER PTHR30265 1 161 3.2E-31 T 22-04-2016 YE0264 d954f21d49f8a942c92c27a0d0149d9c 162 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 4 159 6.4E-57 T 22-04-2016 IPR010215 Transcription antitermination protein RfaH GO:0006355 YE0264 d954f21d49f8a942c92c27a0d0149d9c 162 Gene3D G3DSA:3.30.70.940 1 101 2.0E-15 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 YE0264 d954f21d49f8a942c92c27a0d0149d9c 162 Pfam PF02357 Transcription termination factor nusG 2 96 7.6E-17 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 YE1369 ec4e8e8e092ce1de548a01e17c296bf7 473 SUPERFAMILY SSF46626 326 448 4.8E-19 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 YE1369 ec4e8e8e092ce1de548a01e17c296bf7 473 PANTHER PTHR35008:SF2 34 453 1.5E-116 T 22-04-2016 YE1369 ec4e8e8e092ce1de548a01e17c296bf7 473 PIRSF PIRSF000018 1 453 1.2E-167 T 22-04-2016 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 YE1369 ec4e8e8e092ce1de548a01e17c296bf7 473 SUPERFAMILY SSF46626 178 286 2.13E-16 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 YE1369 ec4e8e8e092ce1de548a01e17c296bf7 473 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 323 411 4.0E-8 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 YE1369 ec4e8e8e092ce1de548a01e17c296bf7 473 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 43 131 5.2E-5 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 YE1369 ec4e8e8e092ce1de548a01e17c296bf7 473 SUPERFAMILY SSF46626 35 167 1.24E-17 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 YE1369 ec4e8e8e092ce1de548a01e17c296bf7 473 PANTHER PTHR35008 34 453 1.5E-116 T 22-04-2016 YE1369 ec4e8e8e092ce1de548a01e17c296bf7 473 Gene3D G3DSA:1.10.760.10 334 423 8.7E-19 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 YE1369 ec4e8e8e092ce1de548a01e17c296bf7 473 Gene3D G3DSA:1.10.760.10 44 134 4.7E-15 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 YE1369 ec4e8e8e092ce1de548a01e17c296bf7 473 Gene3D G3DSA:1.10.760.10 178 286 3.8E-12 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 YE1369 ec4e8e8e092ce1de548a01e17c296bf7 473 Gene3D G3DSA:1.10.710.10 139 140 2.4E-4 T 22-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 YE1369 ec4e8e8e092ce1de548a01e17c296bf7 473 Gene3D G3DSA:1.10.710.10 320 333 2.4E-4 T 22-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 YE1369 ec4e8e8e092ce1de548a01e17c296bf7 473 Gene3D G3DSA:1.10.710.10 24 43 2.4E-4 T 22-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 YE2012 3a3118efed8eff9c15716b548db51e2a 343 Gene3D G3DSA:1.10.260.40 6 57 3.6E-23 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE2012 3a3118efed8eff9c15716b548db51e2a 343 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 64 321 1.8E-57 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain YE2012 3a3118efed8eff9c15716b548db51e2a 343 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE2012 3a3118efed8eff9c15716b548db51e2a 343 SUPERFAMILY SSF53822 65 342 1.63E-57 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YE2012 3a3118efed8eff9c15716b548db51e2a 343 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 52 7.1E-18 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE2012 3a3118efed8eff9c15716b548db51e2a 343 SMART SM00354 5 75 2.0E-31 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE2012 3a3118efed8eff9c15716b548db51e2a 343 SUPERFAMILY SSF47413 4 63 2.22E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE2012 3a3118efed8eff9c15716b548db51e2a 343 PANTHER PTHR30146 5 342 2.2E-92 T 22-04-2016 YE2012 3a3118efed8eff9c15716b548db51e2a 343 Gene3D G3DSA:3.40.50.2300 178 323 3.4E-42 T 22-04-2016 YE2012 3a3118efed8eff9c15716b548db51e2a 343 Gene3D G3DSA:3.40.50.2300 58 177 1.2E-33 T 22-04-2016 YE3526 bf843790323c595d8a1e7d207d2d57eb 439 PIRSF PIRSF006060 1 439 9.2E-53 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YE3526 bf843790323c595d8a1e7d207d2d57eb 439 PANTHER PTHR11785 2 439 1.5E-215 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YE3526 bf843790323c595d8a1e7d207d2d57eb 439 TIGRFAM TIGR04299 antiport_PotE: putrescine-ornithine antiporter 5 433 6.9E-246 T 22-04-2016 IPR027566 Putrescine-ornithine antiporter GO:0015496|GO:0015822|GO:0015847 YE3526 bf843790323c595d8a1e7d207d2d57eb 439 Pfam PF13520 Amino acid permease 10 404 5.2E-52 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YE3526 bf843790323c595d8a1e7d207d2d57eb 439 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 1 430 2.7E-148 T 22-04-2016 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 YE3526 bf843790323c595d8a1e7d207d2d57eb 439 PANTHER PTHR11785:SF341 2 439 1.5E-215 T 22-04-2016 YE3538 0caddbb5ac51f6cdc7a049edb30a2951 169 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 29 52 2.0E-12 T 22-04-2016 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 YE3538 0caddbb5ac51f6cdc7a049edb30a2951 169 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 78 100 2.0E-12 T 22-04-2016 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 YE3538 0caddbb5ac51f6cdc7a049edb30a2951 169 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 54 73 2.0E-12 T 22-04-2016 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 YE3538 0caddbb5ac51f6cdc7a049edb30a2951 169 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 110 132 2.0E-12 T 22-04-2016 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 YE3538 0caddbb5ac51f6cdc7a049edb30a2951 169 Gene3D G3DSA:1.25.40.10 42 137 4.4E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YE3538 0caddbb5ac51f6cdc7a049edb30a2951 169 SUPERFAMILY SSF48452 44 135 1.9E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YE3538 0caddbb5ac51f6cdc7a049edb30a2951 169 TIGRFAM TIGR02552 LcrH_SycD: type III secretion low calcium response chaperone LcrH/SycD 27 149 7.6E-35 T 22-04-2016 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 YE3538 0caddbb5ac51f6cdc7a049edb30a2951 169 PIRSF PIRSF003165 1 168 4.0E-60 T 22-04-2016 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup YE3538 0caddbb5ac51f6cdc7a049edb30a2951 169 Pfam PF07720 Tetratricopeptide repeat 43 76 2.1E-10 T 22-04-2016 IPR011716 Tetratricopeptide TPR-3 YE3538 0caddbb5ac51f6cdc7a049edb30a2951 169 Pfam PF07720 Tetratricopeptide repeat 78 110 7.7E-11 T 22-04-2016 IPR011716 Tetratricopeptide TPR-3 YE1989 58f0c21b02f70a08959a2a8bcdaef64a 209 SMART SM00900 100 192 1.1E-34 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 YE1989 58f0c21b02f70a08959a2a8bcdaef64a 209 PIRSF PIRSF006091 1 201 2.8E-72 T 22-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 YE1989 58f0c21b02f70a08959a2a8bcdaef64a 209 PANTHER PTHR36118:SF1 1 209 1.6E-79 T 22-04-2016 YE1989 58f0c21b02f70a08959a2a8bcdaef64a 209 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 9 193 6.2E-67 T 22-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 YE1989 58f0c21b02f70a08959a2a8bcdaef64a 209 PANTHER PTHR36118 1 209 1.6E-79 T 22-04-2016 YE1989 58f0c21b02f70a08959a2a8bcdaef64a 209 Pfam PF04205 FMN-binding domain 100 187 3.6E-17 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 YE1989 58f0c21b02f70a08959a2a8bcdaef64a 209 Hamap MF_00479 Electron transport complex subunit RsxG [rsxG]. 2 194 26.986 T 22-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 YE1397 af8cc790824ddb9e0acfdf1fb3bd2dbb 215 SMART SM00421 148 205 2.3E-14 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE1397 af8cc790824ddb9e0acfdf1fb3bd2dbb 215 Gene3D G3DSA:1.10.10.10 126 206 6.4E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1397 af8cc790824ddb9e0acfdf1fb3bd2dbb 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 7.9E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE1397 af8cc790824ddb9e0acfdf1fb3bd2dbb 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 7.9E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE1397 af8cc790824ddb9e0acfdf1fb3bd2dbb 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 7.9E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE1397 af8cc790824ddb9e0acfdf1fb3bd2dbb 215 SUPERFAMILY SSF46894 144 206 1.97E-16 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YE1397 af8cc790824ddb9e0acfdf1fb3bd2dbb 215 Pfam PF00072 Response regulator receiver domain 6 120 7.7E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE1397 af8cc790824ddb9e0acfdf1fb3bd2dbb 215 SMART SM00448 4 120 4.3E-15 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE1397 af8cc790824ddb9e0acfdf1fb3bd2dbb 215 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE1397 af8cc790824ddb9e0acfdf1fb3bd2dbb 215 SUPERFAMILY SSF52172 3 136 2.56E-22 T 22-04-2016 IPR011006 CheY-like superfamily YE1397 af8cc790824ddb9e0acfdf1fb3bd2dbb 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 204 1.8E-17 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE1397 af8cc790824ddb9e0acfdf1fb3bd2dbb 215 PANTHER PTHR26402 4 210 6.3E-153 T 22-04-2016 YE1397 af8cc790824ddb9e0acfdf1fb3bd2dbb 215 PANTHER PTHR26402:SF510 4 210 6.3E-153 T 22-04-2016 YE1397 af8cc790824ddb9e0acfdf1fb3bd2dbb 215 Hamap MF_00981 Transcriptional regulatory protein RcsB [rcsB]. 1 214 51.611 T 22-04-2016 IPR030864 Transcriptional regulatory protein RcsB GO:0000160|GO:0006355 YE1397 af8cc790824ddb9e0acfdf1fb3bd2dbb 215 Gene3D G3DSA:3.40.50.2300 2 125 6.9E-22 T 22-04-2016 YE1928 5eeb10d6e400cefd405777b3dd55571a 86 PANTHER PTHR38781:SF1 2 86 2.1E-24 T 22-04-2016 YE1928 5eeb10d6e400cefd405777b3dd55571a 86 Pfam PF04221 RelB antitoxin 4 83 1.2E-28 T 22-04-2016 IPR007337 RelB antitoxin/Antitoxin DinJ YE1928 5eeb10d6e400cefd405777b3dd55571a 86 PANTHER PTHR38781 2 86 2.1E-24 T 22-04-2016 YE1928 5eeb10d6e400cefd405777b3dd55571a 86 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 84 7.7E-25 T 22-04-2016 IPR007337 RelB antitoxin/Antitoxin DinJ YE1928 5eeb10d6e400cefd405777b3dd55571a 86 PIRSF PIRSF003108 1 86 3.8E-33 T 22-04-2016 IPR026262 Antitoxin DinJ GO:0000986|GO:0015643|GO:0044010 YEP0084 980d4fbc8ece695bcb9c76e943a13bc8 43 PANTHER PTHR23389 8 43 4.6E-12 T 22-04-2016 YEP0084 980d4fbc8ece695bcb9c76e943a13bc8 43 PANTHER PTHR23389:SF7 8 43 4.6E-12 T 22-04-2016 YEP0084 980d4fbc8ece695bcb9c76e943a13bc8 43 SUPERFAMILY SSF56091 1 43 2.07E-8 T 22-04-2016 YEP0045 eb896464a1f71ad7ae051ad646fb3c18 244 PANTHER PTHR13932 1 244 2.8E-141 T 22-04-2016 YEP0045 eb896464a1f71ad7ae051ad646fb3c18 244 SMART SM00729 1 154 6.4E-16 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 YEP0045 eb896464a1f71ad7ae051ad646fb3c18 244 Pfam PF04055 Radical SAM superfamily 26 109 1.8E-8 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 YEP0045 eb896464a1f71ad7ae051ad646fb3c18 244 Gene3D G3DSA:3.80.30.20 3 157 4.0E-23 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe YEP0045 eb896464a1f71ad7ae051ad646fb3c18 244 SUPERFAMILY SSF102114 3 244 6.15E-82 T 22-04-2016 YEP0045 eb896464a1f71ad7ae051ad646fb3c18 244 PANTHER PTHR13932:SF6 1 244 2.8E-141 T 22-04-2016 YEP0045 eb896464a1f71ad7ae051ad646fb3c18 244 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 1 243 1.1E-116 T 22-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 YE0150 82839b01a1e46ab7720ca2dc3dc93b14 308 Gene3D G3DSA:3.30.470.10 6 129 1.8E-44 T 22-04-2016 YE0150 82839b01a1e46ab7720ca2dc3dc93b14 308 SUPERFAMILY SSF56752 6 307 1.83E-105 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 YE0150 82839b01a1e46ab7720ca2dc3dc93b14 308 PANTHER PTHR11825 1 305 2.6E-132 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 YE0150 82839b01a1e46ab7720ca2dc3dc93b14 308 ProSitePatterns PS00770 Aminotransferases class-IV signature. 193 222 - T 22-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 YE0150 82839b01a1e46ab7720ca2dc3dc93b14 308 Pfam PF01063 Amino-transferase class IV 35 267 4.2E-48 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 YE0150 82839b01a1e46ab7720ca2dc3dc93b14 308 Gene3D G3DSA:3.20.10.10 134 294 1.9E-55 T 22-04-2016 YE0150 82839b01a1e46ab7720ca2dc3dc93b14 308 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 9 306 4.8E-143 T 22-04-2016 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|UniPathway: UPA00047|UniPathway: UPA00048|UniPathway: UPA00049 YE0150 82839b01a1e46ab7720ca2dc3dc93b14 308 PANTHER PTHR11825:SF7 1 305 2.6E-132 T 22-04-2016 YE0762 20404696027ba106d6168fac0143c8b2 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 1.4E-166 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 YE0762 20404696027ba106d6168fac0143c8b2 302 SUPERFAMILY SSF52402 6 209 1.02E-74 T 22-04-2016 YE0762 20404696027ba106d6168fac0143c8b2 302 Gene3D G3DSA:3.40.50.620 2 210 2.3E-62 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YE0762 20404696027ba106d6168fac0143c8b2 302 Gene3D G3DSA:3.40.50.620 244 253 2.3E-62 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YE0762 20404696027ba106d6168fac0143c8b2 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 58.573 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 YE0762 20404696027ba106d6168fac0143c8b2 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 3.2E-64 T 22-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 YE0762 20404696027ba106d6168fac0143c8b2 302 PIRSF PIRSF002936 1 302 3.9E-155 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 YE0762 20404696027ba106d6168fac0143c8b2 302 PANTHER PTHR23293 178 211 1.2E-99 T 22-04-2016 YE0762 20404696027ba106d6168fac0143c8b2 302 PANTHER PTHR23293 245 302 1.2E-99 T 22-04-2016 YE0762 20404696027ba106d6168fac0143c8b2 302 PANTHER PTHR23293 1 158 1.2E-99 T 22-04-2016 YE3316 75813e4a250dc35d5e59304252b3a4d6 178 SUPERFAMILY SSF54523 25 170 2.98E-12 T 22-04-2016 YE3316 75813e4a250dc35d5e59304252b3a4d6 178 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 21 42 3.8E-4 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site YE0443 857fccf432e8fa4a3a39fbd8e2cf5e60 386 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 58 283 2.5E-14 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YE0443 857fccf432e8fa4a3a39fbd8e2cf5e60 386 Gene3D G3DSA:2.40.50.100 165 198 7.0E-26 T 22-04-2016 YE0443 857fccf432e8fa4a3a39fbd8e2cf5e60 386 Gene3D G3DSA:2.40.50.100 59 90 7.0E-26 T 22-04-2016 YE0443 857fccf432e8fa4a3a39fbd8e2cf5e60 386 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 32 365 1.6E-82 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 YE0443 857fccf432e8fa4a3a39fbd8e2cf5e60 386 PANTHER PTHR30158 1 385 3.3E-144 T 22-04-2016 YE0443 857fccf432e8fa4a3a39fbd8e2cf5e60 386 SUPERFAMILY SSF111369 44 288 3.79E-79 T 22-04-2016 YE0443 857fccf432e8fa4a3a39fbd8e2cf5e60 386 PANTHER PTHR30158:SF3 1 385 3.3E-144 T 22-04-2016 YE2792 1f15267f6d7c3d75b1754beafd19d31b 294 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 157 278 4.8E-44 T 22-04-2016 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 YE2792 1f15267f6d7c3d75b1754beafd19d31b 294 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 102 136 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 YE2792 1f15267f6d7c3d75b1754beafd19d31b 294 Hamap MF_01558 Cytidine deaminase [cdd]. 1 293 49.334 T 22-04-2016 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 YE2792 1f15267f6d7c3d75b1754beafd19d31b 294 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 64 140 7.8E-12 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 YE2792 1f15267f6d7c3d75b1754beafd19d31b 294 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 31 285 1.5E-85 T 22-04-2016 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 YE2792 1f15267f6d7c3d75b1754beafd19d31b 294 PIRSF PIRSF006334 14 294 1.1E-108 T 22-04-2016 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 YE2792 1f15267f6d7c3d75b1754beafd19d31b 294 PANTHER PTHR11644:SF15 18 294 2.7E-153 T 22-04-2016 YE2792 1f15267f6d7c3d75b1754beafd19d31b 294 Gene3D G3DSA:3.40.140.10 32 177 9.6E-43 T 22-04-2016 YE2792 1f15267f6d7c3d75b1754beafd19d31b 294 Gene3D G3DSA:3.40.140.10 186 292 4.6E-23 T 22-04-2016 YE2792 1f15267f6d7c3d75b1754beafd19d31b 294 PANTHER PTHR11644 18 294 2.7E-153 T 22-04-2016 YE2792 1f15267f6d7c3d75b1754beafd19d31b 294 SUPERFAMILY SSF53927 154 292 1.1E-39 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 YE2792 1f15267f6d7c3d75b1754beafd19d31b 294 SUPERFAMILY SSF53927 1 149 3.01E-40 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 YE1959 89d1a429890efb11c33d4775f2dde85c 244 Pfam PF08241 Methyltransferase domain 47 141 1.1E-17 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 YE1959 89d1a429890efb11c33d4775f2dde85c 244 PANTHER PTHR10108:SF865 5 222 1.2E-63 T 22-04-2016 YE1959 89d1a429890efb11c33d4775f2dde85c 244 Gene3D G3DSA:3.40.50.150 12 215 1.3E-33 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE1959 89d1a429890efb11c33d4775f2dde85c 244 PANTHER PTHR10108 5 222 1.2E-63 T 22-04-2016 YE1959 89d1a429890efb11c33d4775f2dde85c 244 SUPERFAMILY SSF53335 5 234 4.6E-40 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE0988 a9e83f331e925e6d5c1c22d046953033 508 Pfam PF13289 SIR2-like domain 151 248 2.1E-18 T 22-04-2016 YE0988 a9e83f331e925e6d5c1c22d046953033 508 PIRSF PIRSF014677 10 508 4.2E-57 T 22-04-2016 IPR011202 Uncharacterised conserved protein UCP014677 YE3405 2110c2013b9aa39562da5a00bb023e3b 205 PANTHER PTHR30086:SF0 1 201 1.5E-95 T 22-04-2016 YE3405 2110c2013b9aa39562da5a00bb023e3b 205 TIGRFAM TIGR00948 2a75: L-lysine exporter 15 191 3.7E-65 T 22-04-2016 IPR004777 L-lysine exporter/arginine exporter GO:0016021 YE3405 2110c2013b9aa39562da5a00bb023e3b 205 PANTHER PTHR30086 1 201 1.5E-95 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 YE3405 2110c2013b9aa39562da5a00bb023e3b 205 Hamap MF_01901 Arginine exporter protein ArgO [argO]. 1 205 39.059 T 22-04-2016 IPR023445 Arginine exporter protein ArgO, enterobacteria GO:0015181|GO:0015809 YE3405 2110c2013b9aa39562da5a00bb023e3b 205 Pfam PF01810 LysE type translocator 14 202 9.4E-49 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 YE3480 20a600a92080c5ef0466f30c655a92c9 104 Pfam PF01845 CcdB protein 2 102 2.1E-28 T 22-04-2016 IPR002712 Toxin CcdB GO:0006276|GO:0008657 YE3480 20a600a92080c5ef0466f30c655a92c9 104 ProDom PD012578 PLASMID TOXIN CCDB CYTOTOXIC LETB POST-SEGREGATION SYSTEM CCDB-LIKE GYRASE FUSED-CCDB 11 103 7.0E-26 T 22-04-2016 IPR002712 Toxin CcdB GO:0006276|GO:0008657 YE3480 20a600a92080c5ef0466f30c655a92c9 104 SUPERFAMILY SSF50118 1 102 8.5E-24 T 22-04-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor YE3480 20a600a92080c5ef0466f30c655a92c9 104 Gene3D G3DSA:2.30.30.110 1 102 4.3E-31 T 22-04-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor YE2403 c5d677779c25a8cb7266b419be599fd0 254 PANTHER PTHR12598:SF0 1 254 2.9E-107 T 22-04-2016 YE2403 c5d677779c25a8cb7266b419be599fd0 254 Pfam PF03932 CutC family 3 201 2.2E-72 T 22-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 YE2403 c5d677779c25a8cb7266b419be599fd0 254 SUPERFAMILY SSF110395 3 244 4.18E-75 T 22-04-2016 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 YE2403 c5d677779c25a8cb7266b419be599fd0 254 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 2 245 38.237 T 22-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 YE2403 c5d677779c25a8cb7266b419be599fd0 254 PANTHER PTHR12598 1 254 2.9E-107 T 22-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 YE2403 c5d677779c25a8cb7266b419be599fd0 254 Gene3D G3DSA:3.20.20.380 1 244 1.4E-88 T 22-04-2016 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 YE0866 a9b799993ca01a6684c311c64ea68839 365 PIRSF PIRSF018494 1 346 4.6E-149 T 22-04-2016 IPR030935 Phage portal protein PBSX family, Proteobacteria YE0866 a9b799993ca01a6684c311c64ea68839 365 Pfam PF04860 Phage portal protein 104 326 6.7E-15 T 22-04-2016 IPR006944 Bacteriophage/Gene transfer agent portal protein YE0866 a9b799993ca01a6684c311c64ea68839 365 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 60 329 1.1E-65 T 22-04-2016 IPR006430 Phage portal protein PBSX family YE0169 fd6d0436b891a82ad7263c7c934237a6 365 PANTHER PTHR22926:SF3 10 358 5.5E-112 T 22-04-2016 YE0169 fd6d0436b891a82ad7263c7c934237a6 365 Pfam PF00953 Glycosyl transferase family 4 75 232 1.0E-27 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 YE0169 fd6d0436b891a82ad7263c7c934237a6 365 TIGRFAM TIGR02380 ECA_wecA: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 8 350 5.2E-165 T 22-04-2016 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|UniPathway: UPA00281 YE0169 fd6d0436b891a82ad7263c7c934237a6 365 Hamap MF_02030 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase [wecA]. 9 353 28.484 T 22-04-2016 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|UniPathway: UPA00281 YE0169 fd6d0436b891a82ad7263c7c934237a6 365 PANTHER PTHR22926 10 358 5.5E-112 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 YE2054 2ffb576e13de422081b05316dead151b 270 SUPERFAMILY SSF56655 9 266 2.09E-65 T 22-04-2016 YE2054 2ffb576e13de422081b05316dead151b 270 PANTHER PTHR20854 5 233 7.7E-64 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 YE2054 2ffb576e13de422081b05316dead151b 270 Gene3D G3DSA:3.40.190.80 160 266 6.2E-20 T 22-04-2016 YE2054 2ffb576e13de422081b05316dead151b 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 90 106 4.7E-29 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 YE2054 2ffb576e13de422081b05316dead151b 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 139 162 4.7E-29 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 YE2054 2ffb576e13de422081b05316dead151b 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 70 86 4.7E-29 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 YE2054 2ffb576e13de422081b05316dead151b 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 215 239 4.7E-29 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 YE2054 2ffb576e13de422081b05316dead151b 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 48 68 4.7E-29 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 YE2054 2ffb576e13de422081b05316dead151b 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 184 205 4.7E-29 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 YE2054 2ffb576e13de422081b05316dead151b 270 PANTHER PTHR20854:SF4 5 233 7.7E-64 T 22-04-2016 YE2054 2ffb576e13de422081b05316dead151b 270 Gene3D G3DSA:3.30.540.10 9 159 1.1E-46 T 22-04-2016 YE2054 2ffb576e13de422081b05316dead151b 270 Pfam PF00459 Inositol monophosphatase family 10 253 5.5E-53 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 YE2054 2ffb576e13de422081b05316dead151b 270 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 90 103 - T 22-04-2016 IPR020583 Inositol monophosphatase, metal-binding site YE1877 4fb08b3de00a9ed711ced37180cb4761 263 SUPERFAMILY SSF55781 77 259 1.9E-53 T 22-04-2016 IPR029016 GAF domain-like YE1877 4fb08b3de00a9ed711ced37180cb4761 263 SUPERFAMILY SSF46785 13 86 8.84E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1877 4fb08b3de00a9ed711ced37180cb4761 263 Gene3D G3DSA:1.10.10.10 12 85 1.0E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1877 4fb08b3de00a9ed711ced37180cb4761 263 Pfam PF09339 IclR helix-turn-helix domain 15 65 4.4E-14 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 YE1877 4fb08b3de00a9ed711ced37180cb4761 263 SMART SM00346 13 102 1.4E-36 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 YE1877 4fb08b3de00a9ed711ced37180cb4761 263 PANTHER PTHR30136:SF7 1 263 9.9E-131 T 22-04-2016 YE1877 4fb08b3de00a9ed711ced37180cb4761 263 PANTHER PTHR30136 1 263 9.9E-131 T 22-04-2016 YE1877 4fb08b3de00a9ed711ced37180cb4761 263 Gene3D G3DSA:3.30.450.40 86 261 4.9E-67 T 22-04-2016 IPR029016 GAF domain-like YE1877 4fb08b3de00a9ed711ced37180cb4761 263 Pfam PF01614 Bacterial transcriptional regulator 129 254 3.9E-41 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal YE3752 4c2a3def694a09e4d622d6becb088408 260 Pfam PF00005 ABC transporter 19 165 3.0E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE3752 4c2a3def694a09e4d622d6becb088408 260 PANTHER PTHR24220:SF368 3 259 5.0E-199 T 22-04-2016 YE3752 4c2a3def694a09e4d622d6becb088408 260 SMART SM00382 26 223 3.1E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain YE3752 4c2a3def694a09e4d622d6becb088408 260 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE3752 4c2a3def694a09e4d622d6becb088408 260 PANTHER PTHR24220 3 259 5.0E-199 T 22-04-2016 YE3752 4c2a3def694a09e4d622d6becb088408 260 Gene3D G3DSA:3.40.50.300 2 233 1.2E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3752 4c2a3def694a09e4d622d6becb088408 260 SUPERFAMILY SSF52540 2 230 3.04E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3224 1f79ab0efd4987cfd9cf1372d53ecaa5 815 Gene3D G3DSA:1.10.540.10 95 234 9.0E-33 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 YE3224 1f79ab0efd4987cfd9cf1372d53ecaa5 815 PANTHER PTHR10909 49 531 4.8E-304 T 22-04-2016 YE3224 1f79ab0efd4987cfd9cf1372d53ecaa5 815 Gene3D G3DSA:2.40.110.10 237 348 5.2E-17 T 22-04-2016 YE3224 1f79ab0efd4987cfd9cf1372d53ecaa5 815 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 147 233 1.6E-16 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 YE3224 1f79ab0efd4987cfd9cf1372d53ecaa5 815 SUPERFAMILY SSF56645 119 355 3.4E-45 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 YE3224 1f79ab0efd4987cfd9cf1372d53ecaa5 815 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 360 507 1.2E-10 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 YE3224 1f79ab0efd4987cfd9cf1372d53ecaa5 815 Pfam PF09317 Domain of unknown function (DUF1974) 514 792 3.3E-117 T 22-04-2016 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.-|UniPathway: UPA00659 YE3224 1f79ab0efd4987cfd9cf1372d53ecaa5 815 Gene3D G3DSA:1.20.140.10 349 507 8.1E-22 T 22-04-2016 YE3224 1f79ab0efd4987cfd9cf1372d53ecaa5 815 SUPERFAMILY SSF47203 360 507 5.8E-20 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 YE3224 1f79ab0efd4987cfd9cf1372d53ecaa5 815 PANTHER PTHR10909:SF321 49 531 4.8E-304 T 22-04-2016 YE3224 1f79ab0efd4987cfd9cf1372d53ecaa5 815 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 237 328 8.8E-9 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 YE2243 8b3b97502070faa14e909b450a533bd4 338 PANTHER PTHR26402 8 150 4.7E-78 T 22-04-2016 YE2243 8b3b97502070faa14e909b450a533bd4 338 SMART SM00448 8 120 3.2E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE2243 8b3b97502070faa14e909b450a533bd4 338 Pfam PF00072 Response regulator receiver domain 10 120 3.9E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE2243 8b3b97502070faa14e909b450a533bd4 338 PANTHER PTHR26402:SF554 8 150 4.7E-78 T 22-04-2016 YE2243 8b3b97502070faa14e909b450a533bd4 338 Gene3D G3DSA:3.40.50.2300 6 124 4.2E-30 T 22-04-2016 YE2243 8b3b97502070faa14e909b450a533bd4 338 Hamap MF_00958 Regulator of RpoS [rssB]. 1 337 56.361 T 22-04-2016 IPR028616 Regulator of RpoS YE2243 8b3b97502070faa14e909b450a533bd4 338 SUPERFAMILY SSF52172 7 145 7.26E-31 T 22-04-2016 IPR011006 CheY-like superfamily YE1319 3efd62b049b28ca98f9ea999d544e200 228 PANTHER PTHR30133:SF1 1 228 1.6E-175 T 22-04-2016 IPR030199 Histidine transport system permease protein HisQ GO:0003333|GO:0016021 YE1319 3efd62b049b28ca98f9ea999d544e200 228 PANTHER PTHR30133 1 228 1.6E-175 T 22-04-2016 YE1319 3efd62b049b28ca98f9ea999d544e200 228 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 7 114 5.5E-20 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 YE1319 3efd62b049b28ca98f9ea999d544e200 228 Gene3D G3DSA:1.10.3720.10 7 219 3.6E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE1319 3efd62b049b28ca98f9ea999d544e200 228 SUPERFAMILY SSF161098 8 205 7.85E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE1319 3efd62b049b28ca98f9ea999d544e200 228 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 220 1.5E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE3238 0c67a344a204b0181d43ec85423dcbbe 257 PANTHER PTHR34979 1 250 6.9E-57 T 22-04-2016 YE3238 0c67a344a204b0181d43ec85423dcbbe 257 Pfam PF03591 AzlC protein 27 167 8.4E-39 T 22-04-2016 IPR011606 Branched-chain amino acid transport, permease YE3970 3e1a66cb2c723f808b57551a8cb4b990 232 Gene3D G3DSA:3.40.50.1000 6 21 1.3E-43 T 22-04-2016 IPR023214 HAD-like domain YE3970 3e1a66cb2c723f808b57551a8cb4b990 232 Gene3D G3DSA:3.40.50.1000 79 205 1.3E-43 T 22-04-2016 IPR023214 HAD-like domain YE3970 3e1a66cb2c723f808b57551a8cb4b990 232 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 94 187 2.4E-11 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YE3970 3e1a66cb2c723f808b57551a8cb4b990 232 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 81 192 1.2E-10 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YE3970 3e1a66cb2c723f808b57551a8cb4b990 232 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 10 220 4.4E-81 T 22-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 YE3970 3e1a66cb2c723f808b57551a8cb4b990 232 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 7 223 34.613 T 22-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 YE3970 3e1a66cb2c723f808b57551a8cb4b990 232 Gene3D G3DSA:1.10.150.240 22 78 1.5E-23 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 YE3970 3e1a66cb2c723f808b57551a8cb4b990 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 1.2E-11 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YE3970 3e1a66cb2c723f808b57551a8cb4b990 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 155 175 1.2E-11 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YE3970 3e1a66cb2c723f808b57551a8cb4b990 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 1.2E-11 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YE3970 3e1a66cb2c723f808b57551a8cb4b990 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 1.2E-11 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YE3970 3e1a66cb2c723f808b57551a8cb4b990 232 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 192 4.2E-37 T 22-04-2016 IPR023214 HAD-like domain YE3970 3e1a66cb2c723f808b57551a8cb4b990 232 SUPERFAMILY SSF56784 5 222 3.01E-59 T 22-04-2016 IPR023214 HAD-like domain YE3970 3e1a66cb2c723f808b57551a8cb4b990 232 PANTHER PTHR18901:SF14 1 232 5.4E-83 T 22-04-2016 YE3970 3e1a66cb2c723f808b57551a8cb4b990 232 PANTHER PTHR18901 1 232 5.4E-83 T 22-04-2016 YE1079 b9314f7ef7edfcd49a0c966e0d0215d7 74 SUPERFAMILY SSF161187 1 70 4.84E-27 T 22-04-2016 IPR029037 YfgJ-like YE1079 b9314f7ef7edfcd49a0c966e0d0215d7 74 Pfam PF07191 zinc-ribbons 4 68 1.7E-27 T 22-04-2016 IPR010807 Protein of unknown function DUF1407 YE1079 b9314f7ef7edfcd49a0c966e0d0215d7 74 Gene3D G3DSA:2.10.290.10 1 70 1.1E-30 T 22-04-2016 IPR029037 YfgJ-like YE1079 b9314f7ef7edfcd49a0c966e0d0215d7 74 ProDom PD060428 YFGJ CYTOPLASMIC VP0614 ECS3372 VC0765 YPO2873 Y1359 STY2763A VV0773 5 68 8.0E-28 T 22-04-2016 IPR010807 Protein of unknown function DUF1407 YE1021 718995784b04b1fa1b0f315d0bbdd1a3 126 SUPERFAMILY SSF56214 3 125 1.44E-30 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 YE1021 718995784b04b1fa1b0f315d0bbdd1a3 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 122 3.7E-26 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 YE1021 718995784b04b1fa1b0f315d0bbdd1a3 126 Gene3D G3DSA:3.90.470.20 1 125 3.3E-43 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 YE1021 718995784b04b1fa1b0f315d0bbdd1a3 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 9 92 2.0E-42 T 22-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 YE1021 718995784b04b1fa1b0f315d0bbdd1a3 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 126 26.412 T 22-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 YE1021 718995784b04b1fa1b0f315d0bbdd1a3 126 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 126 7.1E-38 T 22-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 YE1021 718995784b04b1fa1b0f315d0bbdd1a3 126 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 126 1.4E-52 T 22-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 YE1740 6044f0f5fc5e7e53a9ac51aac81317d6 94 SUPERFAMILY SSF54909 1 81 4.56E-14 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel YE1740 6044f0f5fc5e7e53a9ac51aac81317d6 94 PANTHER PTHR37828 1 94 2.8E-27 T 22-04-2016 YE1740 6044f0f5fc5e7e53a9ac51aac81317d6 94 PANTHER PTHR37828:SF1 1 94 2.8E-27 T 22-04-2016 YE1740 6044f0f5fc5e7e53a9ac51aac81317d6 94 Pfam PF03795 YCII-related domain 1 79 1.1E-10 T 22-04-2016 IPR005545 YCII-related YE2096 bfd141eba64bbcc573e83d6537d3865c 61 ProDom PD052969 LIPOPROTEIN PRECURSOR SIGNAL YNBE MEMBRANE OUTER POSSIBLE SIMILAR ECS2004 SO2063 15 61 2.0E-19 T 22-04-2016 YE2096 bfd141eba64bbcc573e83d6537d3865c 61 Pfam PF13617 YnbE-like lipoprotein 7 59 5.7E-26 T 22-04-2016 IPR025985 YnbE-like lipoprotein YE4004 8d74fe995ca49599e0d24df6a5a0e460 239 SMART SM00448 5 116 1.2E-44 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE4004 8d74fe995ca49599e0d24df6a5a0e460 239 Gene3D G3DSA:3.40.50.2300 4 127 1.7E-42 T 22-04-2016 YE4004 8d74fe995ca49599e0d24df6a5a0e460 239 PANTHER PTHR26402 5 235 2.0E-115 T 22-04-2016 YE4004 8d74fe995ca49599e0d24df6a5a0e460 239 PANTHER PTHR26402:SF292 5 235 2.0E-115 T 22-04-2016 YE4004 8d74fe995ca49599e0d24df6a5a0e460 239 Gene3D G3DSA:1.10.10.10 132 235 1.3E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE4004 8d74fe995ca49599e0d24df6a5a0e460 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 1.7E-22 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YE4004 8d74fe995ca49599e0d24df6a5a0e460 239 SMART SM00862 156 232 1.7E-23 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YE4004 8d74fe995ca49599e0d24df6a5a0e460 239 SUPERFAMILY SSF52172 3 126 1.15E-41 T 22-04-2016 IPR011006 CheY-like superfamily YE4004 8d74fe995ca49599e0d24df6a5a0e460 239 SUPERFAMILY SSF46894 132 234 2.07E-26 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YE4004 8d74fe995ca49599e0d24df6a5a0e460 239 Pfam PF00072 Response regulator receiver domain 7 117 1.3E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE3664 7ca3ddec56c12e6e912d7829ecc52271 210 Pfam PF00293 NUDIX domain 59 180 5.7E-13 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 YE3664 7ca3ddec56c12e6e912d7829ecc52271 210 PANTHER PTHR11839:SF5 1 209 1.6E-129 T 22-04-2016 YE3664 7ca3ddec56c12e6e912d7829ecc52271 210 SUPERFAMILY SSF55811 10 205 3.93E-50 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YE3664 7ca3ddec56c12e6e912d7829ecc52271 210 ProSitePatterns PS00893 Nudix box signature. 97 118 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 YE3664 7ca3ddec56c12e6e912d7829ecc52271 210 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 15 199 2.9E-75 T 22-04-2016 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 YE3664 7ca3ddec56c12e6e912d7829ecc52271 210 Gene3D G3DSA:3.90.79.10 7 206 8.5E-56 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YE3664 7ca3ddec56c12e6e912d7829ecc52271 210 PANTHER PTHR11839 1 209 1.6E-129 T 22-04-2016 YE4062 343c9feeead6319d1f459ba53a97a623 706 PANTHER PTHR30441 112 704 2.9E-160 T 22-04-2016 YE4062 343c9feeead6319d1f459ba53a97a623 706 PANTHER PTHR30441 6 90 2.9E-160 T 22-04-2016 YE4062 343c9feeead6319d1f459ba53a97a623 706 PANTHER PTHR30441:SF2 112 704 2.9E-160 T 22-04-2016 YE4062 343c9feeead6319d1f459ba53a97a623 706 PANTHER PTHR30441:SF2 6 90 2.9E-160 T 22-04-2016 YE4062 343c9feeead6319d1f459ba53a97a623 706 Pfam PF05170 AsmA family 1 599 2.0E-135 T 22-04-2016 IPR007844 AsmA YE1404 43ee5b8f85ea8ab8607374e452c9cf37 337 PIRSF PIRSF038896 6 336 3.1E-97 T 22-04-2016 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 YE1404 43ee5b8f85ea8ab8607374e452c9cf37 337 PANTHER PTHR15032 42 337 1.3E-118 T 22-04-2016 YE1404 43ee5b8f85ea8ab8607374e452c9cf37 337 Pfam PF12706 Beta-lactamase superfamily domain 97 294 1.9E-40 T 22-04-2016 IPR001279 Metallo-beta-lactamase YE1404 43ee5b8f85ea8ab8607374e452c9cf37 337 SUPERFAMILY SSF56281 74 300 1.57E-36 T 22-04-2016 IPR001279 Metallo-beta-lactamase YE1404 43ee5b8f85ea8ab8607374e452c9cf37 337 PANTHER PTHR15032:SF4 42 337 1.3E-118 T 22-04-2016 YE1404 43ee5b8f85ea8ab8607374e452c9cf37 337 Gene3D G3DSA:3.60.15.10 62 336 1.3E-83 T 22-04-2016 IPR001279 Metallo-beta-lactamase YE0653 2eb2193b92eb8def883a45274380e6dd 365 SMART SM01329 8 357 1.3E-198 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 YE0653 2eb2193b92eb8def883a45274380e6dd 365 Gene3D G3DSA:3.40.718.10 2 359 2.1E-129 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 YE0653 2eb2193b92eb8def883a45274380e6dd 365 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 249 268 - T 22-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 YE0653 2eb2193b92eb8def883a45274380e6dd 365 PANTHER PTHR11835 2 363 1.4E-202 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 YE0653 2eb2193b92eb8def883a45274380e6dd 365 PANTHER PTHR11835:SF35 2 363 1.4E-202 T 22-04-2016 YE0653 2eb2193b92eb8def883a45274380e6dd 365 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 8 356 1.1E-165 T 22-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 YE0653 2eb2193b92eb8def883a45274380e6dd 365 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 8 357 5.9E-134 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 YE0653 2eb2193b92eb8def883a45274380e6dd 365 SUPERFAMILY SSF53659 2 362 7.2E-123 T 22-04-2016 YE0653 2eb2193b92eb8def883a45274380e6dd 365 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 7 361 51.374 T 22-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 YE4213 d113201c11992c8e3e3782981be5fe75 127 Pfam PF03899 ATP synthase I chain 13 109 4.2E-17 T 22-04-2016 IPR005598 ATP synthase protein I YE4153 30116b84b2f211d161472427ed9395b1 151 SUPERFAMILY SSF55729 1 133 2.27E-24 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE4153 30116b84b2f211d161472427ed9395b1 151 PANTHER PTHR23091 1 137 5.8E-33 T 22-04-2016 YE4153 30116b84b2f211d161472427ed9395b1 151 PANTHER PTHR23091:SF266 1 137 5.8E-33 T 22-04-2016 YE4153 30116b84b2f211d161472427ed9395b1 151 Gene3D G3DSA:3.40.630.30 1 132 1.9E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE4153 30116b84b2f211d161472427ed9395b1 151 Pfam PF13673 Acetyltransferase (GNAT) domain 60 133 1.3E-14 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YE2551 cfe24389669acfe42644cd7df964aa57 554 SUPERFAMILY SSF64518 98 552 9.68E-49 T 22-04-2016 YE2551 cfe24389669acfe42644cd7df964aa57 554 PANTHER PTHR30033 1 554 1.5E-126 T 22-04-2016 YE2551 cfe24389669acfe42644cd7df964aa57 554 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 492 551 9.4E-7 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YE2551 cfe24389669acfe42644cd7df964aa57 554 PRINTS PR01005 Flagellar hook-associated protein signature 12 35 1.5E-84 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YE2551 cfe24389669acfe42644cd7df964aa57 554 PRINTS PR01005 Flagellar hook-associated protein signature 360 382 1.5E-84 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YE2551 cfe24389669acfe42644cd7df964aa57 554 PRINTS PR01005 Flagellar hook-associated protein signature 472 493 1.5E-84 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YE2551 cfe24389669acfe42644cd7df964aa57 554 PRINTS PR01005 Flagellar hook-associated protein signature 216 234 1.5E-84 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YE2551 cfe24389669acfe42644cd7df964aa57 554 PRINTS PR01005 Flagellar hook-associated protein signature 447 466 1.5E-84 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YE2551 cfe24389669acfe42644cd7df964aa57 554 PRINTS PR01005 Flagellar hook-associated protein signature 260 282 1.5E-84 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YE2551 cfe24389669acfe42644cd7df964aa57 554 PRINTS PR01005 Flagellar hook-associated protein signature 50 72 1.5E-84 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YE2551 cfe24389669acfe42644cd7df964aa57 554 PRINTS PR01005 Flagellar hook-associated protein signature 519 543 1.5E-84 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YE2551 cfe24389669acfe42644cd7df964aa57 554 PRINTS PR01005 Flagellar hook-associated protein signature 124 144 1.5E-84 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YE2551 cfe24389669acfe42644cd7df964aa57 554 PRINTS PR01005 Flagellar hook-associated protein signature 157 181 1.5E-84 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YE2551 cfe24389669acfe42644cd7df964aa57 554 PANTHER PTHR30033:SF1 1 554 1.5E-126 T 22-04-2016 YE2551 cfe24389669acfe42644cd7df964aa57 554 Pfam PF00460 Flagella basal body rod protein 6 35 8.3E-6 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 YE2551 cfe24389669acfe42644cd7df964aa57 554 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 4 340 5.6E-72 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 YE2384 eb6a8628752d864d55f4054e6f3a89bb 289 Pfam PF01380 SIS domain 124 252 1.6E-24 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 YE2384 eb6a8628752d864d55f4054e6f3a89bb 289 SUPERFAMILY SSF53697 95 277 2.78E-42 T 22-04-2016 YE2384 eb6a8628752d864d55f4054e6f3a89bb 289 PANTHER PTHR30514 1 271 1.4E-196 T 22-04-2016 YE2384 eb6a8628752d864d55f4054e6f3a89bb 289 Gene3D G3DSA:3.40.50.10490 97 270 4.2E-39 T 22-04-2016 YE2384 eb6a8628752d864d55f4054e6f3a89bb 289 Gene3D G3DSA:1.10.10.10 1 80 3.7E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2384 eb6a8628752d864d55f4054e6f3a89bb 289 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 3.8E-29 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 YE2384 eb6a8628752d864d55f4054e6f3a89bb 289 PANTHER PTHR30514:SF7 1 271 1.4E-196 T 22-04-2016 YE2384 eb6a8628752d864d55f4054e6f3a89bb 289 SUPERFAMILY SSF46689 1 80 4.48E-21 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE2139 bd5c4a04bdf40b75d3d435832d8e8a2c 424 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YE2139 bd5c4a04bdf40b75d3d435832d8e8a2c 424 Pfam PF01479 S4 domain 359 400 5.8E-7 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YE2139 bd5c4a04bdf40b75d3d435832d8e8a2c 424 SMART SM00363 357 419 2.0E-5 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YE2139 bd5c4a04bdf40b75d3d435832d8e8a2c 424 Gene3D G3DSA:3.10.290.10 322 423 7.3E-30 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YE2139 bd5c4a04bdf40b75d3d435832d8e8a2c 424 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 2 423 1.2E-143 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 YE2139 bd5c4a04bdf40b75d3d435832d8e8a2c 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 221 233 2.5E-32 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 YE2139 bd5c4a04bdf40b75d3d435832d8e8a2c 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 188 210 2.5E-32 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 YE2139 bd5c4a04bdf40b75d3d435832d8e8a2c 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 2.5E-32 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 YE2139 bd5c4a04bdf40b75d3d435832d8e8a2c 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 167 182 2.5E-32 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 YE2139 bd5c4a04bdf40b75d3d435832d8e8a2c 424 Pfam PF00579 tRNA synthetases class I (W and Y) 31 328 1.6E-91 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YE2139 bd5c4a04bdf40b75d3d435832d8e8a2c 424 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 4 423 46.068 T 22-04-2016 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 YE2139 bd5c4a04bdf40b75d3d435832d8e8a2c 424 SUPERFAMILY SSF55174 327 423 5.89E-21 T 22-04-2016 YE2139 bd5c4a04bdf40b75d3d435832d8e8a2c 424 Gene3D G3DSA:1.10.240.10 238 321 4.9E-42 T 22-04-2016 YE2139 bd5c4a04bdf40b75d3d435832d8e8a2c 424 SUPERFAMILY SSF52374 4 328 1.66E-108 T 22-04-2016 YE2139 bd5c4a04bdf40b75d3d435832d8e8a2c 424 Gene3D G3DSA:3.40.50.620 3 237 1.9E-104 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YE2139 bd5c4a04bdf40b75d3d435832d8e8a2c 424 PANTHER PTHR11766 5 424 6.5E-222 T 22-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 YE3603 6aaa4b36ba49804964dad5ec3d5bc5ce 366 Gene3D G3DSA:3.40.50.300 189 348 4.2E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3603 6aaa4b36ba49804964dad5ec3d5bc5ce 366 PANTHER PTHR30134 117 364 1.2E-138 T 22-04-2016 YE3603 6aaa4b36ba49804964dad5ec3d5bc5ce 366 SUPERFAMILY SSF52540 152 362 1.79E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3603 6aaa4b36ba49804964dad5ec3d5bc5ce 366 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 182 343 9.7E-37 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain YE3603 6aaa4b36ba49804964dad5ec3d5bc5ce 366 PANTHER PTHR30134:SF2 117 364 1.2E-138 T 22-04-2016 YE3603 6aaa4b36ba49804964dad5ec3d5bc5ce 366 TIGRFAM TIGR00073 hypB: hydrogenase accessory protein HypB 154 365 1.9E-92 T 22-04-2016 IPR004392 Hydrogenase accessory protein HypB GO:0006461|GO:0016151 YE3689 d919c58767444ab64e3a98063d1a7832 302 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 187 204 - T 22-04-2016 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 YE3689 d919c58767444ab64e3a98063d1a7832 302 PANTHER PTHR10088 1 299 1.6E-150 T 22-04-2016 YE3689 d919c58767444ab64e3a98063d1a7832 302 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 4 297 42.78 T 22-04-2016 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 YE3689 d919c58767444ab64e3a98063d1a7832 302 SUPERFAMILY SSF53697 8 251 1.25E-73 T 22-04-2016 YE3689 d919c58767444ab64e3a98063d1a7832 302 Pfam PF13580 SIS domain 42 167 3.5E-13 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 YE3689 d919c58767444ab64e3a98063d1a7832 302 Gene3D G3DSA:3.40.50.10490 7 252 5.0E-88 T 22-04-2016 YE3689 d919c58767444ab64e3a98063d1a7832 302 PANTHER PTHR10088:SF5 1 299 1.6E-150 T 22-04-2016 YE3689 d919c58767444ab64e3a98063d1a7832 302 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 8 297 3.5E-131 T 22-04-2016 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 YE0371 b3ac1260da03761c369d850ea0119d46 384 PANTHER PTHR30002 2 376 7.7E-211 T 22-04-2016 YE0371 b3ac1260da03761c369d850ea0119d46 384 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 198 209 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YE0371 b3ac1260da03761c369d850ea0119d46 384 Pfam PF13484 4Fe-4S double cluster binding domain 197 261 4.0E-19 T 22-04-2016 YE0371 b3ac1260da03761c369d850ea0119d46 384 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 14 353 8.5E-149 T 22-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 YE0371 b3ac1260da03761c369d850ea0119d46 384 Pfam PF08331 Domain of unknown function (DUF1730) 62 145 2.2E-21 T 22-04-2016 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700|UniPathway: UPA00392 YE0371 b3ac1260da03761c369d850ea0119d46 384 SUPERFAMILY SSF46548 144 261 5.75E-20 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 YE0371 b3ac1260da03761c369d850ea0119d46 384 PANTHER PTHR30002:SF4 2 376 7.7E-211 T 22-04-2016 YE0371 b3ac1260da03761c369d850ea0119d46 384 Gene3D G3DSA:3.30.70.20 195 264 1.5E-6 T 22-04-2016 YE0371 b3ac1260da03761c369d850ea0119d46 384 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 7 320 51.167 T 22-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 YE2097 b34d838241c29a66ca71b505fd8f92e6 877 Pfam PF11739 Dicarboxylate transport 658 859 7.4E-64 T 22-04-2016 IPR021730 Dicarboxylate transport YE2980 a2ca658a9107db785e1c1148ef04e1d6 381 SUPERFAMILY SSF51338 1 53 1.35E-19 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YE2980 a2ca658a9107db785e1c1148ef04e1d6 381 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 377 1.7E-162 T 22-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 YE2980 a2ca658a9107db785e1c1148ef04e1d6 381 Gene3D G3DSA:3.20.20.140 55 349 2.9E-98 T 22-04-2016 YE2980 a2ca658a9107db785e1c1148ef04e1d6 381 PANTHER PTHR11113 1 381 1.8E-178 T 22-04-2016 YE2980 a2ca658a9107db785e1c1148ef04e1d6 381 SUPERFAMILY SSF51556 54 350 7.33E-101 T 22-04-2016 IPR032466 Metal-dependent hydrolase YE2980 a2ca658a9107db785e1c1148ef04e1d6 381 Pfam PF01979 Amidohydrolase family 50 379 2.9E-41 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 YE2980 a2ca658a9107db785e1c1148ef04e1d6 381 PANTHER PTHR11113:SF7 1 381 1.8E-178 T 22-04-2016 YE2980 a2ca658a9107db785e1c1148ef04e1d6 381 PIRSF PIRSF038994 1 381 5.2E-116 T 22-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 YE2980 a2ca658a9107db785e1c1148ef04e1d6 381 Gene3D G3DSA:2.30.40.10 350 366 6.6E-12 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YE2980 a2ca658a9107db785e1c1148ef04e1d6 381 Gene3D G3DSA:2.30.40.10 2 54 6.6E-12 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YE3108 0ae7c15400a099c15f6340fee359fa55 47 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 17 41 0.002 T 22-04-2016 YE3108 0ae7c15400a099c15f6340fee359fa55 47 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 9 41 1.5E-9 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3108 0ae7c15400a099c15f6340fee359fa55 47 SUPERFAMILY SSF57840 8 41 7.59E-14 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3108 0ae7c15400a099c15f6340fee359fa55 47 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 17.15 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3108 0ae7c15400a099c15f6340fee359fa55 47 PANTHER PTHR18804 1 47 4.1E-23 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3108 0ae7c15400a099c15f6340fee359fa55 47 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3108 0ae7c15400a099c15f6340fee359fa55 47 Pfam PF00444 Ribosomal protein L36 1 41 2.6E-17 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3108 0ae7c15400a099c15f6340fee359fa55 47 PANTHER PTHR18804:SF11 1 47 4.1E-23 T 22-04-2016 YE1131 b8bd0be3099cdaddf24d02d41f545056 117 PANTHER PTHR30041 1 117 1.4E-68 T 22-04-2016 YE1131 b8bd0be3099cdaddf24d02d41f545056 117 PANTHER PTHR30041:SF4 1 117 1.4E-68 T 22-04-2016 YE1131 b8bd0be3099cdaddf24d02d41f545056 117 Gene3D G3DSA:3.40.30.10 1 117 6.1E-50 T 22-04-2016 IPR012336 Thioredoxin-like fold YE1131 b8bd0be3099cdaddf24d02d41f545056 117 SUPERFAMILY SSF52833 3 117 1.68E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold YE1131 b8bd0be3099cdaddf24d02d41f545056 117 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 4 117 1.2E-46 T 22-04-2016 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 YE1131 b8bd0be3099cdaddf24d02d41f545056 117 Pfam PF03960 ArsC family 7 116 6.3E-22 T 22-04-2016 IPR006660 Arsenate reductase-like YE0851 d9e6e6ce21831a940361f5a926a75468 373 SUPERFAMILY SSF48179 241 366 1.13E-41 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 YE0851 d9e6e6ce21831a940361f5a926a75468 373 SMART SM00830 9 89 6.7E-31 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 YE0851 d9e6e6ce21831a940361f5a926a75468 373 Gene3D G3DSA:3.40.50.720 84 247 1.3E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain YE0851 d9e6e6ce21831a940361f5a926a75468 373 Pfam PF01817 Chorismate mutase type II 9 86 1.3E-20 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 YE0851 d9e6e6ce21831a940361f5a926a75468 373 PANTHER PTHR21363 88 371 6.0E-83 T 22-04-2016 YE0851 d9e6e6ce21831a940361f5a926a75468 373 Gene3D G3DSA:1.10.3660.10 248 372 7.2E-58 T 22-04-2016 YE0851 d9e6e6ce21831a940361f5a926a75468 373 Gene3D G3DSA:1.20.59.10 3 83 9.4E-23 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 YE0851 d9e6e6ce21831a940361f5a926a75468 373 PIRSF PIRSF001499 1 373 2.3E-184 T 22-04-2016 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00122 YE0851 d9e6e6ce21831a940361f5a926a75468 373 Pfam PF02153 Prephenate dehydrogenase 138 344 2.5E-33 T 22-04-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 YE0851 d9e6e6ce21831a940361f5a926a75468 373 SUPERFAMILY SSF51735 91 238 2.17E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain YE0851 d9e6e6ce21831a940361f5a926a75468 373 PANTHER PTHR21363:SF0 88 371 6.0E-83 T 22-04-2016 YE0851 d9e6e6ce21831a940361f5a926a75468 373 TIGRFAM TIGR01799 CM_T: chorismate mutase 5 87 1.3E-44 T 22-04-2016 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00122 YE0851 d9e6e6ce21831a940361f5a926a75468 373 SUPERFAMILY SSF48600 4 88 6.59E-24 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 YE0071 4b387feb139f419f65a540ebd7b811c8 354 Gene3D G3DSA:3.40.50.2000 1 141 1.9E-55 T 22-04-2016 YE0071 4b387feb139f419f65a540ebd7b811c8 354 PANTHER PTHR30160 1 353 1.5E-119 T 22-04-2016 YE0071 4b387feb139f419f65a540ebd7b811c8 354 SUPERFAMILY SSF53756 1 344 1.26E-100 T 22-04-2016 YE0071 4b387feb139f419f65a540ebd7b811c8 354 Gene3D G3DSA:3.40.50.2000 165 344 3.3E-55 T 22-04-2016 YE0071 4b387feb139f419f65a540ebd7b811c8 354 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 69 324 2.2E-81 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 YE0071 4b387feb139f419f65a540ebd7b811c8 354 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 2 341 2.8E-162 T 22-04-2016 IPR011910 Lipopolysaccharide heptosyltransferase II GO:0009103|GO:0016757 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 YE0071 4b387feb139f419f65a540ebd7b811c8 354 PANTHER PTHR30160:SF7 1 353 1.5E-119 T 22-04-2016 YE1243 c20b5840a880e323ad89c07e8c48caf3 446 PIRSF PIRSF006060 3 441 1.3E-67 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YE1243 c20b5840a880e323ad89c07e8c48caf3 446 Pfam PF00324 Amino acid permease 18 368 7.8E-36 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 YE1243 c20b5840a880e323ad89c07e8c48caf3 446 PANTHER PTHR11785:SF346 3 435 5.2E-135 T 22-04-2016 YE1243 c20b5840a880e323ad89c07e8c48caf3 446 PANTHER PTHR11785 3 435 5.2E-135 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YE4132 f8d5dbfa75f509752ad839b7b26f199c 309 Hamap MF_00611 Protein FdhE [fdhE]. 3 308 49.892 T 22-04-2016 IPR006452 Formate dehydrogenase accessory protein GO:0005737 YE4132 f8d5dbfa75f509752ad839b7b26f199c 309 TIGRFAM TIGR01562 FdhE: formate dehydrogenase accessory protein FdhE 2 307 5.7E-120 T 22-04-2016 IPR006452 Formate dehydrogenase accessory protein GO:0005737 YE4132 f8d5dbfa75f509752ad839b7b26f199c 309 Pfam PF04216 Protein involved in formate dehydrogenase formation 23 306 1.0E-113 T 22-04-2016 IPR006452 Formate dehydrogenase accessory protein GO:0005737 YE4132 f8d5dbfa75f509752ad839b7b26f199c 309 PANTHER PTHR37689 6 309 5.6E-114 T 22-04-2016 YE4132 f8d5dbfa75f509752ad839b7b26f199c 309 Gene3D G3DSA:3.90.1670.10 27 308 3.2E-101 T 22-04-2016 IPR024064 FdhE-like YE4132 f8d5dbfa75f509752ad839b7b26f199c 309 PIRSF PIRSF018296 1 309 2.3E-134 T 22-04-2016 IPR006452 Formate dehydrogenase accessory protein GO:0005737 YE4132 f8d5dbfa75f509752ad839b7b26f199c 309 PANTHER PTHR37689:SF1 6 309 5.6E-114 T 22-04-2016 YE4132 f8d5dbfa75f509752ad839b7b26f199c 309 SUPERFAMILY SSF144020 26 308 1.96E-95 T 22-04-2016 IPR024064 FdhE-like YE2555 233a620f0700f00e8070237050e09c6a 217 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 103 200 3.1E-30 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G YE2555 233a620f0700f00e8070237050e09c6a 217 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 14 93 3.1E-27 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G YE2555 233a620f0700f00e8070237050e09c6a 217 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 139 217 7.7E-27 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YE2555 233a620f0700f00e8070237050e09c6a 217 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 1 216 1.0E-93 T 22-04-2016 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 YE2555 233a620f0700f00e8070237050e09c6a 217 PANTHER PTHR30435:SF19 1 217 1.7E-103 T 22-04-2016 YE2555 233a620f0700f00e8070237050e09c6a 217 SUPERFAMILY SSF117143 51 179 8.63E-36 T 22-04-2016 YE2555 233a620f0700f00e8070237050e09c6a 217 PANTHER PTHR30435 1 217 1.7E-103 T 22-04-2016 YE2932 36d699c7471b1878edf4a321e078ec0b 430 PANTHER PTHR11731:SF123 160 428 3.2E-137 T 22-04-2016 YE2932 36d699c7471b1878edf4a321e078ec0b 430 PANTHER PTHR11731:SF123 1 121 3.2E-137 T 22-04-2016 YE2932 36d699c7471b1878edf4a321e078ec0b 430 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 14 427 1.2E-159 T 22-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 YE2932 36d699c7471b1878edf4a321e078ec0b 430 Hamap MF_00671 Protein TolB [tolB]. 5 426 34.493 T 22-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 YE2932 36d699c7471b1878edf4a321e078ec0b 430 Gene3D G3DSA:3.40.50.10070 22 152 4.5E-53 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 YE2932 36d699c7471b1878edf4a321e078ec0b 430 Pfam PF07676 WD40-like Beta Propeller Repeat 237 272 1.9E-9 T 22-04-2016 IPR011659 WD40-like Beta Propeller YE2932 36d699c7471b1878edf4a321e078ec0b 430 Pfam PF07676 WD40-like Beta Propeller Repeat 369 397 0.0063 T 22-04-2016 IPR011659 WD40-like Beta Propeller YE2932 36d699c7471b1878edf4a321e078ec0b 430 Pfam PF07676 WD40-like Beta Propeller Repeat 199 223 1.9E-5 T 22-04-2016 IPR011659 WD40-like Beta Propeller YE2932 36d699c7471b1878edf4a321e078ec0b 430 Pfam PF07676 WD40-like Beta Propeller Repeat 282 315 9.1E-10 T 22-04-2016 IPR011659 WD40-like Beta Propeller YE2932 36d699c7471b1878edf4a321e078ec0b 430 Pfam PF04052 TolB amino-terminal domain 23 122 1.4E-32 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 YE2932 36d699c7471b1878edf4a321e078ec0b 430 SUPERFAMILY SSF52964 28 161 2.09E-40 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 YE2932 36d699c7471b1878edf4a321e078ec0b 430 Gene3D G3DSA:2.130.10.10 153 428 4.3E-76 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 YE2932 36d699c7471b1878edf4a321e078ec0b 430 SUPERFAMILY SSF69304 155 428 9.15E-57 T 22-04-2016 YE2932 36d699c7471b1878edf4a321e078ec0b 430 PANTHER PTHR11731 160 428 3.2E-137 T 22-04-2016 YE2932 36d699c7471b1878edf4a321e078ec0b 430 PANTHER PTHR11731 1 121 3.2E-137 T 22-04-2016 YE3024 b695a685d411b0a7e6b336a477c69c0a 229 SMART SM00862 146 221 3.9E-24 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YE3024 b695a685d411b0a7e6b336a477c69c0a 229 Pfam PF00072 Response regulator receiver domain 4 112 7.2E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE3024 b695a685d411b0a7e6b336a477c69c0a 229 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 221 3.2E-90 T 22-04-2016 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 YE3024 b695a685d411b0a7e6b336a477c69c0a 229 PANTHER PTHR26402:SF575 1 224 1.4E-153 T 22-04-2016 YE3024 b695a685d411b0a7e6b336a477c69c0a 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 221 1.5E-24 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YE3024 b695a685d411b0a7e6b336a477c69c0a 229 SUPERFAMILY SSF52172 1 175 1.81E-37 T 22-04-2016 IPR011006 CheY-like superfamily YE3024 b695a685d411b0a7e6b336a477c69c0a 229 PANTHER PTHR26402 1 224 1.4E-153 T 22-04-2016 YE3024 b695a685d411b0a7e6b336a477c69c0a 229 Gene3D G3DSA:3.40.50.2300 1 119 9.2E-38 T 22-04-2016 YE3024 b695a685d411b0a7e6b336a477c69c0a 229 Gene3D G3DSA:1.10.10.10 127 222 1.0E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3024 b695a685d411b0a7e6b336a477c69c0a 229 SMART SM00448 1 111 2.1E-40 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE0135 9b3c1cb49db24f4425be94cb61f193f5 214 PANTHER PTHR30055:SF39 3 211 4.5E-114 T 22-04-2016 YE0135 9b3c1cb49db24f4425be94cb61f193f5 214 Hamap MF_01190 HTH-type transcriptional repressor FabR [fabR]. 5 214 54.727 T 22-04-2016 IPR023764 Transcriptional repressor HTH, FabR YE0135 9b3c1cb49db24f4425be94cb61f193f5 214 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 62 2.2E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YE0135 9b3c1cb49db24f4425be94cb61f193f5 214 SUPERFAMILY SSF46689 5 81 1.61E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE0135 9b3c1cb49db24f4425be94cb61f193f5 214 PANTHER PTHR30055 3 211 4.5E-114 T 22-04-2016 YE0135 9b3c1cb49db24f4425be94cb61f193f5 214 Gene3D G3DSA:1.10.357.10 6 197 2.0E-34 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 YE2529 f4fa020394f0e23b38ade130d8704e8c 200 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 44 181 7.3E-13 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 YE2529 f4fa020394f0e23b38ade130d8704e8c 200 Gene3D G3DSA:1.10.1670.10 147 197 9.4E-7 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal YE2529 f4fa020394f0e23b38ade130d8704e8c 200 PANTHER PTHR10242:SF0 7 197 5.6E-55 T 22-04-2016 YE2529 f4fa020394f0e23b38ade130d8704e8c 200 SMART SM00478 49 198 2.0E-4 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 YE2529 f4fa020394f0e23b38ade130d8704e8c 200 SUPERFAMILY SSF48150 36 197 2.27E-35 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 YE2529 f4fa020394f0e23b38ade130d8704e8c 200 PANTHER PTHR10242 7 197 5.6E-55 T 22-04-2016 YE2529 f4fa020394f0e23b38ade130d8704e8c 200 Gene3D G3DSA:1.10.340.30 39 145 7.6E-26 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 YE3507 d01a643cfaab4ea362960b79ee118203 143 Pfam PF01724 Domain of unknown function DUF29 5 141 4.0E-48 T 22-04-2016 IPR002636 Protein from unkown function DUF29 YE3507 d01a643cfaab4ea362960b79ee118203 143 PANTHER PTHR34235:SF3 6 143 1.8E-53 T 22-04-2016 YE3507 d01a643cfaab4ea362960b79ee118203 143 PANTHER PTHR34235 6 143 1.8E-53 T 22-04-2016 YE2207 72b242bea914cad52a27ef4e5121a5df 206 PANTHER PTHR17490 1 206 1.2E-103 T 22-04-2016 YE2207 72b242bea914cad52a27ef4e5121a5df 206 SUPERFAMILY SSF55821 1 203 1.59E-65 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain YE2207 72b242bea914cad52a27ef4e5121a5df 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 200 2.0E-73 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 YE2207 72b242bea914cad52a27ef4e5121a5df 206 Gene3D G3DSA:3.90.870.10 2 202 9.0E-65 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain YE2207 72b242bea914cad52a27ef4e5121a5df 206 Pfam PF01300 Telomere recombination 23 198 7.5E-46 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 YE2207 72b242bea914cad52a27ef4e5121a5df 206 PANTHER PTHR17490:SF7 1 206 1.2E-103 T 22-04-2016 YE2700 b257db8f3400753246330cc4999e41d6 334 Gene3D G3DSA:2.60.40.1090 200 331 1.2E-8 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YE2700 b257db8f3400753246330cc4999e41d6 334 SUPERFAMILY SSF49401 199 332 1.49E-14 T 22-04-2016 IPR008966 Adhesion domain YE2700 b257db8f3400753246330cc4999e41d6 334 Pfam PF00419 Fimbrial protein 194 333 2.6E-13 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YE2774 cb92011068e55e46f3afe347b2f318ef 445 Pfam PF01609 Transposase DDE domain 128 352 1.6E-30 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 YE2774 cb92011068e55e46f3afe347b2f318ef 445 Pfam PF13006 Insertion element 4 transposase N-terminal 19 108 1.4E-30 T 22-04-2016 IPR024473 Transposase, IS4, N-terminal YE2774 cb92011068e55e46f3afe347b2f318ef 445 PANTHER PTHR37529 3 444 4.6E-77 T 22-04-2016 YE2774 cb92011068e55e46f3afe347b2f318ef 445 SUPERFAMILY SSF53098 108 408 3.79E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE0599 cb92011068e55e46f3afe347b2f318ef 445 Pfam PF01609 Transposase DDE domain 128 352 1.6E-30 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 YE0599 cb92011068e55e46f3afe347b2f318ef 445 Pfam PF13006 Insertion element 4 transposase N-terminal 19 108 1.4E-30 T 22-04-2016 IPR024473 Transposase, IS4, N-terminal YE0599 cb92011068e55e46f3afe347b2f318ef 445 PANTHER PTHR37529 3 444 4.6E-77 T 22-04-2016 YE0599 cb92011068e55e46f3afe347b2f318ef 445 SUPERFAMILY SSF53098 108 408 3.79E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE1968 91165e38173b6e814ffb444aeb6ef556 389 PANTHER PTHR23083 8 348 2.1E-42 T 22-04-2016 YE1968 91165e38173b6e814ffb444aeb6ef556 389 Pfam PF13176 Tetratricopeptide repeat 71 98 0.03 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 YE1968 91165e38173b6e814ffb444aeb6ef556 389 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 387 36.81 T 22-04-2016 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 YE1968 91165e38173b6e814ffb444aeb6ef556 389 SMART SM00028 107 140 140.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 YE1968 91165e38173b6e814ffb444aeb6ef556 389 SMART SM00028 180 213 27.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 YE1968 91165e38173b6e814ffb444aeb6ef556 389 SMART SM00028 69 102 64.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 YE1968 91165e38173b6e814ffb444aeb6ef556 389 SMART SM00028 214 247 5.4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 YE1968 91165e38173b6e814ffb444aeb6ef556 389 SUPERFAMILY SSF48452 42 134 4.55E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YE1968 91165e38173b6e814ffb444aeb6ef556 389 Gene3D G3DSA:1.25.40.10 233 329 1.5E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YE1968 91165e38173b6e814ffb444aeb6ef556 389 Gene3D G3DSA:1.25.40.10 46 94 3.0E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YE1968 91165e38173b6e814ffb444aeb6ef556 389 Gene3D G3DSA:1.25.40.10 112 232 3.0E-17 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YE1968 91165e38173b6e814ffb444aeb6ef556 389 SUPERFAMILY SSF48452 109 279 3.64E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YE3233 9433c62202c35754f3cae8f82f31ea60 229 Hamap MF_01677 Methylthioribulose-1-phosphate dehydratase [mtnB]. 1 223 114.341 T 22-04-2016 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|KEGG: 00400+4.2.1.10|MetaCyc: PWY-4361|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00904 YE3233 9433c62202c35754f3cae8f82f31ea60 229 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 29 214 1.5E-41 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal YE3233 9433c62202c35754f3cae8f82f31ea60 229 TIGRFAM TIGR03328 salvage_mtnB: methylthioribulose-1-phosphate dehydratase 30 218 1.6E-72 T 22-04-2016 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|KEGG: 00400+4.2.1.10|MetaCyc: PWY-4361|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00904 YE3233 9433c62202c35754f3cae8f82f31ea60 229 SUPERFAMILY SSF53639 26 220 6.87E-47 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal YE3233 9433c62202c35754f3cae8f82f31ea60 229 PANTHER PTHR10640 40 216 1.8E-43 T 22-04-2016 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|KEGG: 00400+4.2.1.10|MetaCyc: PWY-4361|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00904 YE3233 9433c62202c35754f3cae8f82f31ea60 229 Gene3D G3DSA:3.40.225.10 28 220 9.9E-48 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal YE3233 9433c62202c35754f3cae8f82f31ea60 229 SMART SM01007 27 215 3.0E-51 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal YE0439 e32289c3fdf02421ff85b378258b0c35 294 Pfam PF13181 Tetratricopeptide repeat 62 94 0.022 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 YE0439 e32289c3fdf02421ff85b378258b0c35 294 PIRSF PIRSF004654 1 292 5.3E-117 T 22-04-2016 IPR023605 Lipoprotein NlpI YE0439 e32289c3fdf02421ff85b378258b0c35 294 SMART SM00028 62 95 0.0033 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 YE0439 e32289c3fdf02421ff85b378258b0c35 294 SMART SM00028 96 129 2.0E-4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 YE0439 e32289c3fdf02421ff85b378258b0c35 294 PANTHER PTHR23083 31 38 1.3E-24 T 22-04-2016 YE0439 e32289c3fdf02421ff85b378258b0c35 294 PANTHER PTHR23083 58 287 1.3E-24 T 22-04-2016 YE0439 e32289c3fdf02421ff85b378258b0c35 294 Pfam PF07719 Tetratricopeptide repeat 96 129 5.2E-5 T 22-04-2016 IPR013105 Tetratricopeptide repeat 2 YE0439 e32289c3fdf02421ff85b378258b0c35 294 SUPERFAMILY SSF48452 27 283 7.85E-76 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YE0439 e32289c3fdf02421ff85b378258b0c35 294 Gene3D G3DSA:1.25.40.10 49 288 2.9E-30 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YE3003 ecbc31c4977a1fd2fe51f5d7064c36f8 370 PANTHER PTHR30474 1 369 1.3E-182 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 YE3003 ecbc31c4977a1fd2fe51f5d7064c36f8 370 PANTHER PTHR30474:SF1 1 369 1.3E-182 T 22-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 YE3003 ecbc31c4977a1fd2fe51f5d7064c36f8 370 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 17 364 7.7E-137 T 22-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 YE3003 ecbc31c4977a1fd2fe51f5d7064c36f8 370 Pfam PF01098 Cell cycle protein 21 364 1.5E-122 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 YE3003 ecbc31c4977a1fd2fe51f5d7064c36f8 370 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 321 345 - T 22-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 YE3391 4daed73d7ee99dc62417ddc5981eca86 959 PANTHER PTHR11773:SF1 1 959 0.0 T 22-04-2016 YE3391 4daed73d7ee99dc62417ddc5981eca86 959 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 8 958 25.373 T 22-04-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 YE3391 4daed73d7ee99dc62417ddc5981eca86 959 Gene3D G3DSA:3.40.640.10 504 778 1.4E-40 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YE3391 4daed73d7ee99dc62417ddc5981eca86 959 Gene3D G3DSA:3.40.640.10 93 305 1.8E-13 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YE3391 4daed73d7ee99dc62417ddc5981eca86 959 Pfam PF02347 Glycine cleavage system P-protein 16 439 5.2E-180 T 22-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 YE3391 4daed73d7ee99dc62417ddc5981eca86 959 Pfam PF02347 Glycine cleavage system P-protein 477 739 1.4E-8 T 22-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 YE3391 4daed73d7ee99dc62417ddc5981eca86 959 SUPERFAMILY SSF53383 931 953 1.79E-97 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YE3391 4daed73d7ee99dc62417ddc5981eca86 959 SUPERFAMILY SSF53383 479 889 1.79E-97 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YE3391 4daed73d7ee99dc62417ddc5981eca86 959 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 17 952 0.0 T 22-04-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 YE3391 4daed73d7ee99dc62417ddc5981eca86 959 SUPERFAMILY SSF53383 17 440 3.7E-98 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YE3391 4daed73d7ee99dc62417ddc5981eca86 959 PANTHER PTHR11773 1 959 0.0 T 22-04-2016 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 YE0763 2bd0d12c9646627392eb99df3c1c860f 478 SUPERFAMILY SSF50465 337 438 6.71E-29 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal YE0763 2bd0d12c9646627392eb99df3c1c860f 478 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 37 217 7.0E-17 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 YE0763 2bd0d12c9646627392eb99df3c1c860f 478 Pfam PF00009 Elongation factor Tu GTP binding domain 29 234 1.3E-44 T 22-04-2016 YE0763 2bd0d12c9646627392eb99df3c1c860f 478 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 22 478 53.227 T 22-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 YE0763 2bd0d12c9646627392eb99df3c1c860f 478 PANTHER PTHR23115 77 352 1.6E-73 T 22-04-2016 YE0763 2bd0d12c9646627392eb99df3c1c860f 478 PANTHER PTHR23115 35 57 1.6E-73 T 22-04-2016 YE0763 2bd0d12c9646627392eb99df3c1c860f 478 SUPERFAMILY SSF52540 24 238 2.1E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0763 2bd0d12c9646627392eb99df3c1c860f 478 SUPERFAMILY SSF50447 245 331 5.3E-23 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain YE0763 2bd0d12c9646627392eb99df3c1c860f 478 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 31 437 2.6E-204 T 22-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 YE0763 2bd0d12c9646627392eb99df3c1c860f 478 Gene3D G3DSA:3.40.50.300 22 238 8.2E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0763 2bd0d12c9646627392eb99df3c1c860f 478 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 86 101 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site YE0763 2bd0d12c9646627392eb99df3c1c860f 478 Gene3D G3DSA:2.40.30.10 246 360 7.0E-17 T 22-04-2016 YE0763 2bd0d12c9646627392eb99df3c1c860f 478 PRINTS PR00315 GTP-binding elongation factor signature 129 140 8.4E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YE0763 2bd0d12c9646627392eb99df3c1c860f 478 PRINTS PR00315 GTP-binding elongation factor signature 166 175 8.4E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YE0763 2bd0d12c9646627392eb99df3c1c860f 478 PRINTS PR00315 GTP-binding elongation factor signature 93 101 8.4E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YE0763 2bd0d12c9646627392eb99df3c1c860f 478 PRINTS PR00315 GTP-binding elongation factor signature 113 123 8.4E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YE0763 2bd0d12c9646627392eb99df3c1c860f 478 PRINTS PR00315 GTP-binding elongation factor signature 32 45 8.4E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YE4149 fba0aedb23760ce64e348b0e327677fd 239 Pfam PF11254 Protein of unknown function (DUF3053) 18 234 2.6E-88 T 22-04-2016 IPR021413 Protein of unknown function DUF3053 YE2675 0b4d77718dd13af8bfa9ebb60742e934 253 Gene3D G3DSA:1.10.10.10 1 55 1.3E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2675 0b4d77718dd13af8bfa9ebb60742e934 253 SUPERFAMILY SSF100950 74 233 2.51E-26 T 22-04-2016 YE2675 0b4d77718dd13af8bfa9ebb60742e934 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.7E-7 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YE2675 0b4d77718dd13af8bfa9ebb60742e934 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.7E-7 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YE2675 0b4d77718dd13af8bfa9ebb60742e934 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 YE2675 0b4d77718dd13af8bfa9ebb60742e934 253 SMART SM01134 72 233 6.1E-57 T 22-04-2016 YE2675 0b4d77718dd13af8bfa9ebb60742e934 253 PANTHER PTHR30363 1 236 1.5E-58 T 22-04-2016 YE2675 0b4d77718dd13af8bfa9ebb60742e934 253 Pfam PF08220 DeoR-like helix-turn-helix domain 6 57 4.0E-15 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YE2675 0b4d77718dd13af8bfa9ebb60742e934 253 Gene3D G3DSA:3.40.50.1360 75 214 4.8E-8 T 22-04-2016 YE2675 0b4d77718dd13af8bfa9ebb60742e934 253 Pfam PF00455 DeoR C terminal sensor domain 74 232 1.8E-40 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain YE2675 0b4d77718dd13af8bfa9ebb60742e934 253 PANTHER PTHR30363:SF4 1 236 1.5E-58 T 22-04-2016 YE2675 0b4d77718dd13af8bfa9ebb60742e934 253 SUPERFAMILY SSF46785 5 62 1.8E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2675 0b4d77718dd13af8bfa9ebb60742e934 253 SMART SM00420 6 58 6.1E-15 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YE0829 5a521d65e5bb0c9f04341181a7d3ed9a 354 Gene3D G3DSA:3.40.50.300 28 270 8.3E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0829 5a521d65e5bb0c9f04341181a7d3ed9a 354 SUPERFAMILY SSF54752 272 327 2.35E-20 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal YE0829 5a521d65e5bb0c9f04341181a7d3ed9a 354 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 6 326 3.6E-170 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 YE0829 5a521d65e5bb0c9f04341181a7d3ed9a 354 PANTHER PTHR22942 1 337 7.7E-205 T 22-04-2016 YE0829 5a521d65e5bb0c9f04341181a7d3ed9a 354 Hamap MF_00268 Protein RecA [recA]. 7 331 50.668 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 YE0829 5a521d65e5bb0c9f04341181a7d3ed9a 354 SUPERFAMILY SSF52540 6 269 6.1E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0829 5a521d65e5bb0c9f04341181a7d3ed9a 354 ProSitePatterns PS00321 recA signature. 215 223 - T 22-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 YE0829 5a521d65e5bb0c9f04341181a7d3ed9a 354 SMART SM00382 59 230 1.1E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain YE0829 5a521d65e5bb0c9f04341181a7d3ed9a 354 PANTHER PTHR22942:SF1 1 337 7.7E-205 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 YE0829 5a521d65e5bb0c9f04341181a7d3ed9a 354 Gene3D G3DSA:3.30.250.10 272 328 1.2E-27 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal YE0829 5a521d65e5bb0c9f04341181a7d3ed9a 354 PRINTS PR00142 RecA protein signature 245 274 1.4E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 YE0829 5a521d65e5bb0c9f04341181a7d3ed9a 354 PRINTS PR00142 RecA protein signature 129 158 1.4E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 YE0829 5a521d65e5bb0c9f04341181a7d3ed9a 354 PRINTS PR00142 RecA protein signature 95 124 1.4E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 YE0829 5a521d65e5bb0c9f04341181a7d3ed9a 354 PRINTS PR00142 RecA protein signature 167 196 1.4E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 YE0829 5a521d65e5bb0c9f04341181a7d3ed9a 354 PRINTS PR00142 RecA protein signature 299 316 1.4E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 YE0829 5a521d65e5bb0c9f04341181a7d3ed9a 354 PRINTS PR00142 RecA protein signature 212 240 1.4E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 YE0829 5a521d65e5bb0c9f04341181a7d3ed9a 354 Pfam PF00154 recA bacterial DNA recombination protein 9 270 2.4E-141 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 YE2544 c8c6b390bbb6e1a9cdd54a960337fcdc 334 PIRSF PIRSF002888 2 330 3.9E-96 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 YE2544 c8c6b390bbb6e1a9cdd54a960337fcdc 334 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 4 320 1.7E-111 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 YE2544 c8c6b390bbb6e1a9cdd54a960337fcdc 334 SUPERFAMILY SSF101801 249 322 1.83E-12 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) YE2544 c8c6b390bbb6e1a9cdd54a960337fcdc 334 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 252 320 1.2E-15 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) YE2544 c8c6b390bbb6e1a9cdd54a960337fcdc 334 SUPERFAMILY SSF103039 48 230 7.59E-20 T 22-04-2016 IPR028976 CheC-like domain YE2544 c8c6b390bbb6e1a9cdd54a960337fcdc 334 PANTHER PTHR30034:SF0 2 334 1.5E-154 T 22-04-2016 YE2544 c8c6b390bbb6e1a9cdd54a960337fcdc 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 113 132 1.4E-30 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 YE2544 c8c6b390bbb6e1a9cdd54a960337fcdc 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 212 230 1.4E-30 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 YE2544 c8c6b390bbb6e1a9cdd54a960337fcdc 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 3 16 1.4E-30 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 YE2544 c8c6b390bbb6e1a9cdd54a960337fcdc 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 88 104 1.4E-30 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 YE2544 c8c6b390bbb6e1a9cdd54a960337fcdc 334 Pfam PF02154 Flagellar motor switch protein FliM 37 230 3.1E-75 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 YE2544 c8c6b390bbb6e1a9cdd54a960337fcdc 334 PANTHER PTHR30034 2 334 1.5E-154 T 22-04-2016 YE2544 c8c6b390bbb6e1a9cdd54a960337fcdc 334 Gene3D G3DSA:2.30.330.10 241 322 2.3E-5 T 22-04-2016 YE0122 9ee7e5dc7a74bbc3953868a8301ec246 775 PANTHER PTHR32552 650 775 0.0 T 22-04-2016 YE0122 9ee7e5dc7a74bbc3953868a8301ec246 775 PANTHER PTHR32552 451 622 0.0 T 22-04-2016 YE0122 9ee7e5dc7a74bbc3953868a8301ec246 775 Pfam PF07715 TonB-dependent Receptor Plug Domain 17 122 1.2E-13 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YE0122 9ee7e5dc7a74bbc3953868a8301ec246 775 Gene3D G3DSA:2.40.170.20 128 410 4.0E-65 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YE0122 9ee7e5dc7a74bbc3953868a8301ec246 775 Gene3D G3DSA:2.40.170.20 462 775 4.0E-65 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YE0122 9ee7e5dc7a74bbc3953868a8301ec246 775 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 8 775 6.0E-168 T 22-04-2016 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 YE0122 9ee7e5dc7a74bbc3953868a8301ec246 775 PANTHER PTHR32552:SF20 8 192 0.0 T 22-04-2016 YE0122 9ee7e5dc7a74bbc3953868a8301ec246 775 PANTHER PTHR32552:SF20 212 417 0.0 T 22-04-2016 YE0122 9ee7e5dc7a74bbc3953868a8301ec246 775 PANTHER PTHR32552:SF20 451 622 0.0 T 22-04-2016 YE0122 9ee7e5dc7a74bbc3953868a8301ec246 775 Pfam PF00593 TonB dependent receptor 469 774 1.8E-27 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YE0122 9ee7e5dc7a74bbc3953868a8301ec246 775 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 7 775 6.2E-125 T 22-04-2016 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 YE0122 9ee7e5dc7a74bbc3953868a8301ec246 775 SUPERFAMILY SSF56935 462 619 6.23E-80 T 22-04-2016 YE0122 9ee7e5dc7a74bbc3953868a8301ec246 775 SUPERFAMILY SSF56935 656 775 6.23E-80 T 22-04-2016 YE0122 9ee7e5dc7a74bbc3953868a8301ec246 775 SUPERFAMILY SSF56935 18 184 6.23E-80 T 22-04-2016 YE0122 9ee7e5dc7a74bbc3953868a8301ec246 775 SUPERFAMILY SSF56935 213 423 6.23E-80 T 22-04-2016 YE0122 9ee7e5dc7a74bbc3953868a8301ec246 775 PANTHER PTHR32552 8 192 0.0 T 22-04-2016 YE0122 9ee7e5dc7a74bbc3953868a8301ec246 775 PANTHER PTHR32552 212 417 0.0 T 22-04-2016 YE0122 9ee7e5dc7a74bbc3953868a8301ec246 775 Gene3D G3DSA:2.170.130.10 13 127 7.7E-33 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YE0122 9ee7e5dc7a74bbc3953868a8301ec246 775 PANTHER PTHR32552:SF20 650 775 0.0 T 22-04-2016 YE2277 6d97d571e6553bdacba201d0b7358521 290 Gene3D G3DSA:2.60.120.10 4 257 5.6E-82 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YE2277 6d97d571e6553bdacba201d0b7358521 290 Pfam PF02678 Pirin 21 127 6.5E-34 T 22-04-2016 IPR003829 Pirin, N-terminal domain YE2277 6d97d571e6553bdacba201d0b7358521 290 SUPERFAMILY SSF51182 3 288 1.57E-86 T 22-04-2016 IPR011051 RmlC-like cupin domain YE2277 6d97d571e6553bdacba201d0b7358521 290 PANTHER PTHR13903 1 288 2.3E-183 T 22-04-2016 IPR012093 Pirin YE2277 6d97d571e6553bdacba201d0b7358521 290 Pfam PF05726 Pirin C-terminal cupin domain 182 284 5.7E-29 T 22-04-2016 IPR008778 Pirin, C-terminal domain YE2277 6d97d571e6553bdacba201d0b7358521 290 PIRSF PIRSF006232 3 290 4.1E-92 T 22-04-2016 IPR012093 Pirin YE2277 6d97d571e6553bdacba201d0b7358521 290 PANTHER PTHR13903:SF12 1 288 2.3E-183 T 22-04-2016 YE1189 ae36d28de0d7bd1c099e51b6185b0d17 211 PANTHER PTHR36204:SF1 1 206 4.6E-103 T 22-04-2016 YE1189 ae36d28de0d7bd1c099e51b6185b0d17 211 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 7 197 4.5E-84 T 22-04-2016 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9|UniPathway: UPA00629 YE1189 ae36d28de0d7bd1c099e51b6185b0d17 211 SUPERFAMILY SSF51366 4 196 1.55E-50 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 YE1189 ae36d28de0d7bd1c099e51b6185b0d17 211 PANTHER PTHR36204 1 206 4.6E-103 T 22-04-2016 YE1189 ae36d28de0d7bd1c099e51b6185b0d17 211 Hamap MF_01235 Putative N-acetylmannosamine-6-phosphate 2-epimerase [nanE]. 1 197 32.623 T 22-04-2016 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9|UniPathway: UPA00629 YE1189 ae36d28de0d7bd1c099e51b6185b0d17 211 Gene3D G3DSA:3.20.20.70 1 198 4.4E-80 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YE0845 94dd18918d7e8623da3f51b8c5ef3910 246 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 233 3.5E-111 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 YE0845 94dd18918d7e8623da3f51b8c5ef3910 246 PIRSF PIRSF000386 1 245 1.7E-102 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 YE0845 94dd18918d7e8623da3f51b8c5ef3910 246 SUPERFAMILY SSF75217 1 244 1.5E-102 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases YE0845 94dd18918d7e8623da3f51b8c5ef3910 246 PANTHER PTHR32125 1 228 8.9E-125 T 22-04-2016 YE0845 94dd18918d7e8623da3f51b8c5ef3910 246 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 246 120.456 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 YE0845 94dd18918d7e8623da3f51b8c5ef3910 246 PANTHER PTHR32125:SF1 1 228 8.9E-125 T 22-04-2016 YE0845 94dd18918d7e8623da3f51b8c5ef3910 246 Gene3D G3DSA:1.10.1270.20 161 244 2.9E-36 T 22-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 YE0845 94dd18918d7e8623da3f51b8c5ef3910 246 Gene3D G3DSA:3.40.1280.10 1 160 1.7E-67 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YE0845 94dd18918d7e8623da3f51b8c5ef3910 246 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 7.6E-71 T 22-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 YE0168 a824dec8b3ba8c868c073fea6540e8d4 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 249.503 T 22-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 YE0168 a824dec8b3ba8c868c073fea6540e8d4 419 Gene3D G3DSA:3.40.50.300 132 418 3.3E-107 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0168 a824dec8b3ba8c868c073fea6540e8d4 419 SUPERFAMILY SSF52540 90 371 2.66E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0168 a824dec8b3ba8c868c073fea6540e8d4 419 PANTHER PTHR15184 102 141 3.2E-199 T 22-04-2016 YE0168 a824dec8b3ba8c868c073fea6540e8d4 419 PANTHER PTHR15184 11 51 3.2E-199 T 22-04-2016 YE0168 a824dec8b3ba8c868c073fea6540e8d4 419 PANTHER PTHR15184 160 418 3.2E-199 T 22-04-2016 YE0168 a824dec8b3ba8c868c073fea6540e8d4 419 SUPERFAMILY SSF68912 1 46 6.67E-12 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 YE0168 a824dec8b3ba8c868c073fea6540e8d4 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 1.3E-220 T 22-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 YE0168 a824dec8b3ba8c868c073fea6540e8d4 419 SMART SM00357 52 118 2.0E-18 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 YE0168 a824dec8b3ba8c868c073fea6540e8d4 419 SMART SM00959 5 47 8.6E-17 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 YE0168 a824dec8b3ba8c868c073fea6540e8d4 419 Gene3D G3DSA:2.40.50.140 49 117 8.5E-37 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE0168 a824dec8b3ba8c868c073fea6540e8d4 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 3.1E-22 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YE0168 a824dec8b3ba8c868c073fea6540e8d4 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 1.9E-16 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 YE0168 a824dec8b3ba8c868c073fea6540e8d4 419 PANTHER PTHR15184:SF34 102 141 3.2E-199 T 22-04-2016 YE0168 a824dec8b3ba8c868c073fea6540e8d4 419 PANTHER PTHR15184:SF34 11 51 3.2E-199 T 22-04-2016 YE0168 a824dec8b3ba8c868c073fea6540e8d4 419 PANTHER PTHR15184:SF34 160 418 3.2E-199 T 22-04-2016 YE0168 a824dec8b3ba8c868c073fea6540e8d4 419 SMART SM00382 170 355 2.0E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain YE0168 a824dec8b3ba8c868c073fea6540e8d4 419 Gene3D G3DSA:1.10.720.10 1 47 9.7E-22 T 22-04-2016 YE0168 a824dec8b3ba8c868c073fea6540e8d4 419 SUPERFAMILY SSF50249 48 125 5.57E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE0168 a824dec8b3ba8c868c073fea6540e8d4 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 2.8E-32 T 22-04-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 YE3005 015595f6ce1cbbf3d52efef264d64757 403 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 292 383 7.8E-25 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 YE3005 015595f6ce1cbbf3d52efef264d64757 403 Gene3D G3DSA:2.60.410.10 292 383 1.2E-31 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 YE3005 015595f6ce1cbbf3d52efef264d64757 403 SUPERFAMILY SSF56601 9 292 3.06E-78 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YE3005 015595f6ce1cbbf3d52efef264d64757 403 Gene3D G3DSA:3.40.710.10 40 291 3.3E-94 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YE3005 015595f6ce1cbbf3d52efef264d64757 403 PANTHER PTHR21581:SF4 1 403 1.8E-227 T 22-04-2016 YE3005 015595f6ce1cbbf3d52efef264d64757 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 72 83 4.4E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 YE3005 015595f6ce1cbbf3d52efef264d64757 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 158 171 4.4E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 YE3005 015595f6ce1cbbf3d52efef264d64757 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 131 148 4.4E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 YE3005 015595f6ce1cbbf3d52efef264d64757 403 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 39 272 1.3E-98 T 22-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 YE3005 015595f6ce1cbbf3d52efef264d64757 403 SMART SM00936 292 383 9.1E-34 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 YE3005 015595f6ce1cbbf3d52efef264d64757 403 SUPERFAMILY SSF69189 292 385 5.89E-25 T 22-04-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 YE3005 015595f6ce1cbbf3d52efef264d64757 403 PANTHER PTHR21581 1 403 1.8E-227 T 22-04-2016 YE1794 92d75cef0391c702ccb047572b282a4a 77 Pfam PF06440 DNA polymerase III, theta subunit 3 71 1.3E-37 T 22-04-2016 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 YE1794 92d75cef0391c702ccb047572b282a4a 77 SUPERFAMILY SSF46575 1 76 1.05E-34 T 22-04-2016 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 YE1794 92d75cef0391c702ccb047572b282a4a 77 ProDom PD057609 DNA POLYMERASE THETA SUBUNIT TRANSFERASE III NUCLEOTIDYLTRANSFERASE III DNA-DIRECTED REPLICATION 4 76 2.0E-32 T 22-04-2016 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 YE1794 92d75cef0391c702ccb047572b282a4a 77 Gene3D G3DSA:1.10.1110.10 1 76 4.9E-41 T 22-04-2016 IPR011325 DNA polymerase III-theta, core, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE1461 8c893e1a7d04b268da17cb461a996d0a 657 Pfam PF00593 TonB dependent receptor 393 655 7.3E-41 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YE1461 8c893e1a7d04b268da17cb461a996d0a 657 SUPERFAMILY SSF56935 22 657 4.03E-126 T 22-04-2016 YE1461 8c893e1a7d04b268da17cb461a996d0a 657 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 39 - T 22-04-2016 IPR010916 TonB box, conserved site YE1461 8c893e1a7d04b268da17cb461a996d0a 657 Gene3D G3DSA:2.170.130.10 23 158 8.1E-42 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YE1461 8c893e1a7d04b268da17cb461a996d0a 657 Gene3D G3DSA:2.40.170.20 159 657 2.0E-100 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YE1461 8c893e1a7d04b268da17cb461a996d0a 657 Pfam PF07715 TonB-dependent Receptor Plug Domain 46 155 2.2E-28 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YE1461 8c893e1a7d04b268da17cb461a996d0a 657 PANTHER PTHR30069:SF2 15 655 1.9E-136 T 22-04-2016 YE1461 8c893e1a7d04b268da17cb461a996d0a 657 PANTHER PTHR30069 15 655 1.9E-136 T 22-04-2016 YE2388 666735f702a6140076196e3019ac55e9 320 PANTHER PTHR30477 1 117 8.9E-106 T 22-04-2016 YE2388 666735f702a6140076196e3019ac55e9 320 PANTHER PTHR30477 138 302 8.9E-106 T 22-04-2016 YE2388 666735f702a6140076196e3019ac55e9 320 SUPERFAMILY SSF53807 29 318 6.38E-80 T 22-04-2016 YE2388 666735f702a6140076196e3019ac55e9 320 Pfam PF01297 Zinc-uptake complex component A periplasmic 30 315 3.4E-58 T 22-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 YE2388 666735f702a6140076196e3019ac55e9 320 Gene3D G3DSA:3.40.50.1980 17 190 6.5E-43 T 22-04-2016 YE2388 666735f702a6140076196e3019ac55e9 320 PANTHER PTHR30477:SF1 1 117 8.9E-106 T 22-04-2016 YE2388 666735f702a6140076196e3019ac55e9 320 PANTHER PTHR30477:SF1 138 302 8.9E-106 T 22-04-2016 YE2388 666735f702a6140076196e3019ac55e9 320 Gene3D G3DSA:3.40.50.1980 207 318 5.6E-31 T 22-04-2016 YE1234 734d5bf7d3e9b735d54cd78549e8afab 223 SUPERFAMILY SSF52964 44 143 1.57E-8 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 YE1234 734d5bf7d3e9b735d54cd78549e8afab 223 PANTHER PTHR41164:SF1 1 222 4.8E-78 T 22-04-2016 YE1234 734d5bf7d3e9b735d54cd78549e8afab 223 Gene3D G3DSA:3.40.50.10070 46 129 1.3E-5 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 YE1234 734d5bf7d3e9b735d54cd78549e8afab 223 PANTHER PTHR41164 1 222 4.8E-78 T 22-04-2016 YE1234 734d5bf7d3e9b735d54cd78549e8afab 223 Pfam PF03783 Curli production assembly/transport component CsgG 43 221 1.1E-33 T 22-04-2016 IPR005534 Curli production assembly/transport component CsgG GO:0030288 YE3520 d26d90cee9f232ee60c5451e38865bfc 410 TIGRFAM TIGR03760 ICE_TraI_Pfluor: integrating conjugative element relaxase, PFGI-1 class 34 249 9.0E-88 T 22-04-2016 IPR022391 Integrating conjugative element relaxase, PFGI-1 class YE3520 d26d90cee9f232ee60c5451e38865bfc 410 Pfam PF07514 Putative helicase 35 246 1.1E-42 T 22-04-2016 IPR011119 Uncharacterised domain, helicase/relaxase, putative YE3520 d26d90cee9f232ee60c5451e38865bfc 410 Pfam PF07515 Putative conjugal transfer nickase/helicase TraI C-term 291 396 1.1E-20 T 22-04-2016 IPR011093 Putative conjugal transfer nickase/helicase TraI, C-terminal YE3520 d26d90cee9f232ee60c5451e38865bfc 410 SUPERFAMILY SSF46785 287 408 2.09E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3520 d26d90cee9f232ee60c5451e38865bfc 410 Gene3D G3DSA:2.40.10.200 307 408 1.2E-11 T 22-04-2016 YE2992 06a77e86e9dae2fcea4e30cb260cc8db 246 PANTHER PTHR30085:SF4 1 244 8.6E-158 T 22-04-2016 IPR030202 Glutamate/aspartate transport system permease protein GltJ/AatQ GO:0006865|GO:0016021|GO:0043190 YE2992 06a77e86e9dae2fcea4e30cb260cc8db 246 SUPERFAMILY SSF161098 24 223 1.06E-36 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE2992 06a77e86e9dae2fcea4e30cb260cc8db 246 PANTHER PTHR30085 1 244 8.6E-158 T 22-04-2016 YE2992 06a77e86e9dae2fcea4e30cb260cc8db 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 24 132 3.5E-15 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 YE2992 06a77e86e9dae2fcea4e30cb260cc8db 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 46 237 5.6E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE2992 06a77e86e9dae2fcea4e30cb260cc8db 246 Gene3D G3DSA:1.10.3720.10 23 237 2.1E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE2049 9fac6da5051fd4963ab0c3e057b630f0 859 PANTHER PTHR12338 174 524 3.2E-100 T 22-04-2016 YE2049 9fac6da5051fd4963ab0c3e057b630f0 859 PANTHER PTHR12338 543 859 3.2E-100 T 22-04-2016 YE2049 9fac6da5051fd4963ab0c3e057b630f0 859 SUPERFAMILY SSF51126 378 523 1.07E-27 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YE2049 9fac6da5051fd4963ab0c3e057b630f0 859 SUPERFAMILY SSF51126 74 349 1.07E-27 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YE2049 9fac6da5051fd4963ab0c3e057b630f0 859 SMART SM00869 580 848 1.3E-33 T 22-04-2016 IPR005546 Autotransporter beta-domain YE2049 9fac6da5051fd4963ab0c3e057b630f0 859 PANTHER PTHR12338:SF5 174 524 3.2E-100 T 22-04-2016 YE2049 9fac6da5051fd4963ab0c3e057b630f0 859 PANTHER PTHR12338:SF5 543 859 3.2E-100 T 22-04-2016 YE2049 9fac6da5051fd4963ab0c3e057b630f0 859 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 416 859 2.7E-96 T 22-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 YE2049 9fac6da5051fd4963ab0c3e057b630f0 859 Pfam PF03212 Pertactin 431 522 2.3E-5 T 22-04-2016 IPR004899 Pertactin, central region YE2049 9fac6da5051fd4963ab0c3e057b630f0 859 SUPERFAMILY SSF103515 557 859 1.96E-42 T 22-04-2016 IPR005546 Autotransporter beta-domain YE2049 9fac6da5051fd4963ab0c3e057b630f0 859 Gene3D G3DSA:2.40.128.130 548 859 5.8E-66 T 22-04-2016 IPR005546 Autotransporter beta-domain YE2049 9fac6da5051fd4963ab0c3e057b630f0 859 Pfam PF03797 Autotransporter beta-domain 578 843 6.0E-35 T 22-04-2016 IPR005546 Autotransporter beta-domain YE2049 9fac6da5051fd4963ab0c3e057b630f0 859 Gene3D G3DSA:2.160.20.20 57 530 5.4E-30 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like YE2959 86247ffce4c63d934e5d159cd560f140 68 Pfam PF10725 Protein of unknown function (DUF2517) 4 63 1.9E-37 T 22-04-2016 IPR019663 Uncharacterised protein YbfA YE3862 c90a4b1c6b767c333e221ba4e19f6dab 428 PANTHER PTHR38762 1 428 5.6E-202 T 22-04-2016 YE3862 c90a4b1c6b767c333e221ba4e19f6dab 428 Gene3D G3DSA:2.40.170.10 25 428 4.6E-166 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 YE3862 c90a4b1c6b767c333e221ba4e19f6dab 428 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 31 423 0.0 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 YE3862 c90a4b1c6b767c333e221ba4e19f6dab 428 Pfam PF02264 LamB porin 27 428 1.4E-144 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 YE3862 c90a4b1c6b767c333e221ba4e19f6dab 428 SUPERFAMILY SSF56935 25 428 5.13E-148 T 22-04-2016 YE3862 c90a4b1c6b767c333e221ba4e19f6dab 428 Hamap MF_01301 Maltoporin [lamB]. 3 428 43.154 T 22-04-2016 IPR023738 Maltoporin GO:0009279|GO:0015481|GO:0015768|GO:0042956|GO:0042958 YE2580 d98516912697dabbc2380c490fe88976 193 ProDom PD016592 ACTIVATOR TRANSCRIPTIONAL FLAGELLUM FLAGELLAR TRANSCRIPTION FLHC RNA DNA-BINDING REGULATION DNA-DIRECTED 1 193 3.0E-112 T 22-04-2016 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 YE2580 d98516912697dabbc2380c490fe88976 193 SUPERFAMILY SSF160930 5 161 1.23E-65 T 22-04-2016 YE2580 d98516912697dabbc2380c490fe88976 193 Pfam PF05280 Flagellar transcriptional activator (FlhC) 1 173 3.5E-84 T 22-04-2016 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 YE2580 d98516912697dabbc2380c490fe88976 193 Hamap MF_01891 Flagellar transcriptional regulator FlhC [flhC]. 1 187 46.422 T 22-04-2016 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 YE2580 d98516912697dabbc2380c490fe88976 193 PIRSF PIRSF003159 1 182 5.2E-91 T 22-04-2016 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 YE0425 96452c5af261fbd6c7283075d9f5a744 158 Gene3D G3DSA:3.10.50.30 79 157 9.3E-31 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 YE0425 96452c5af261fbd6c7283075d9f5a744 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 155 2.9E-59 T 22-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 YE0425 96452c5af261fbd6c7283075d9f5a744 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 74 3.2E-32 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 YE0425 96452c5af261fbd6c7283075d9f5a744 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 157 5.0E-27 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 YE0425 96452c5af261fbd6c7283075d9f5a744 158 PIRSF PIRSF006092 1 158 3.0E-54 T 22-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 YE0425 96452c5af261fbd6c7283075d9f5a744 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 YE0425 96452c5af261fbd6c7283075d9f5a744 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 YE0425 96452c5af261fbd6c7283075d9f5a744 158 SUPERFAMILY SSF46557 3 78 1.96E-29 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 YE0425 96452c5af261fbd6c7283075d9f5a744 158 Gene3D G3DSA:1.10.287.180 1 75 8.3E-36 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 YE0425 96452c5af261fbd6c7283075d9f5a744 158 SUPERFAMILY SSF54534 81 157 4.45E-23 T 22-04-2016 YE0425 96452c5af261fbd6c7283075d9f5a744 158 PANTHER PTHR30437 1 157 1.1E-72 T 22-04-2016 YE0425 96452c5af261fbd6c7283075d9f5a744 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 33.258 T 22-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 YE3474 8b7bfa9a936e780f217d6a8d895f5641 429 PRINTS PR00758 Arsenical pump membrane protein signature 144 168 4.2E-123 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YE3474 8b7bfa9a936e780f217d6a8d895f5641 429 PRINTS PR00758 Arsenical pump membrane protein signature 177 200 4.2E-123 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YE3474 8b7bfa9a936e780f217d6a8d895f5641 429 PRINTS PR00758 Arsenical pump membrane protein signature 278 302 4.2E-123 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YE3474 8b7bfa9a936e780f217d6a8d895f5641 429 PRINTS PR00758 Arsenical pump membrane protein signature 323 345 4.2E-123 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YE3474 8b7bfa9a936e780f217d6a8d895f5641 429 PRINTS PR00758 Arsenical pump membrane protein signature 364 389 4.2E-123 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YE3474 8b7bfa9a936e780f217d6a8d895f5641 429 PRINTS PR00758 Arsenical pump membrane protein signature 101 125 4.2E-123 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YE3474 8b7bfa9a936e780f217d6a8d895f5641 429 PRINTS PR00758 Arsenical pump membrane protein signature 397 421 4.2E-123 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YE3474 8b7bfa9a936e780f217d6a8d895f5641 429 PRINTS PR00758 Arsenical pump membrane protein signature 217 242 4.2E-123 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YE3474 8b7bfa9a936e780f217d6a8d895f5641 429 TIGRFAM TIGR00935 2a45: arsenite/antimonite efflux pump membrane protein 3 427 2.8E-218 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YE3474 8b7bfa9a936e780f217d6a8d895f5641 429 PANTHER PTHR10283:SF21 1 427 5.1E-162 T 22-04-2016 YE3474 8b7bfa9a936e780f217d6a8d895f5641 429 PANTHER PTHR10283 1 427 5.1E-162 T 22-04-2016 YE3474 8b7bfa9a936e780f217d6a8d895f5641 429 Pfam PF02040 Arsenical pump membrane protein 4 423 7.1E-163 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 YE0470 6876abf4887a491cfad1ee2a5cd4ac86 192 SUPERFAMILY SSF52540 1 179 5.79E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0470 6876abf4887a491cfad1ee2a5cd4ac86 192 PANTHER PTHR23117:SF8 1 177 4.4E-88 T 22-04-2016 YE0470 6876abf4887a491cfad1ee2a5cd4ac86 192 Hamap MF_00836 Ribose 1,5-bisphosphate phosphokinase PhnN [phnN]. 1 178 35.309 T 22-04-2016 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532|UniPathway: UPA00087 YE0470 6876abf4887a491cfad1ee2a5cd4ac86 192 SMART SM00072 1 181 6.7E-9 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit YE0470 6876abf4887a491cfad1ee2a5cd4ac86 192 Gene3D G3DSA:3.40.50.300 72 180 1.1E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0470 6876abf4887a491cfad1ee2a5cd4ac86 192 Gene3D G3DSA:3.40.50.300 3 24 1.1E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0470 6876abf4887a491cfad1ee2a5cd4ac86 192 TIGRFAM TIGR02322 phosphon_PhnN: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN 3 178 2.0E-64 T 22-04-2016 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532|UniPathway: UPA00087 YE0470 6876abf4887a491cfad1ee2a5cd4ac86 192 PANTHER PTHR23117 1 177 4.4E-88 T 22-04-2016 YE3993 85d3147b9a9d2a8eb363ce6bf49ffe7a 191 PANTHER PTHR10072 1 97 2.3E-94 T 22-04-2016 YE3993 85d3147b9a9d2a8eb363ce6bf49ffe7a 191 PANTHER PTHR10072 147 188 2.3E-94 T 22-04-2016 YE3993 85d3147b9a9d2a8eb363ce6bf49ffe7a 191 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 2 191 5.9E-101 T 22-04-2016 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 YE3993 85d3147b9a9d2a8eb363ce6bf49ffe7a 191 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 98 3.4E-13 T 22-04-2016 IPR000361 FeS cluster biogenesis YE3993 85d3147b9a9d2a8eb363ce6bf49ffe7a 191 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 119 177 3.0E-27 T 22-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 YE3993 85d3147b9a9d2a8eb363ce6bf49ffe7a 191 Pfam PF01106 NifU-like domain 111 177 5.7E-20 T 22-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 YE3993 85d3147b9a9d2a8eb363ce6bf49ffe7a 191 SUPERFAMILY SSF89360 1 97 4.71E-21 T 22-04-2016 IPR000361 FeS cluster biogenesis YE3993 85d3147b9a9d2a8eb363ce6bf49ffe7a 191 SUPERFAMILY SSF117916 95 184 1.11E-23 T 22-04-2016 YE3993 85d3147b9a9d2a8eb363ce6bf49ffe7a 191 PANTHER PTHR10072:SF37 1 97 2.3E-94 T 22-04-2016 YE3993 85d3147b9a9d2a8eb363ce6bf49ffe7a 191 PANTHER PTHR10072:SF37 147 188 2.3E-94 T 22-04-2016 YE3993 85d3147b9a9d2a8eb363ce6bf49ffe7a 191 Gene3D G3DSA:2.60.300.12 1 97 3.1E-18 T 22-04-2016 IPR000361 FeS cluster biogenesis YE3993 85d3147b9a9d2a8eb363ce6bf49ffe7a 191 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 1 191 45.815 T 22-04-2016 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 YE0410 0b5149c95aeae858ce523ae52eb8e802 337 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 270 282 - T 22-04-2016 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474 YE0410 0b5149c95aeae858ce523ae52eb8e802 337 SUPERFAMILY SSF56655 2 327 3.24E-109 T 22-04-2016 YE0410 0b5149c95aeae858ce523ae52eb8e802 337 Gene3D G3DSA:3.30.540.10 2 193 1.2E-75 T 22-04-2016 YE0410 0b5149c95aeae858ce523ae52eb8e802 337 PANTHER PTHR11556 1 336 5.2E-181 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 YE0410 0b5149c95aeae858ce523ae52eb8e802 337 PIRSF PIRSF000904 1 333 1.2E-120 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 YE0410 0b5149c95aeae858ce523ae52eb8e802 337 Gene3D G3DSA:3.40.190.80 197 329 3.2E-56 T 22-04-2016 YE0410 0b5149c95aeae858ce523ae52eb8e802 337 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 2 330 41.837 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 YE0410 0b5149c95aeae858ce523ae52eb8e802 337 PIRSF PIRSF500210 1 332 1.8E-123 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 YE0410 0b5149c95aeae858ce523ae52eb8e802 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 304 329 4.4E-71 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 YE0410 0b5149c95aeae858ce523ae52eb8e802 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 179 202 4.4E-71 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 YE0410 0b5149c95aeae858ce523ae52eb8e802 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 148 171 4.4E-71 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 YE0410 0b5149c95aeae858ce523ae52eb8e802 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 205 232 4.4E-71 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 YE0410 0b5149c95aeae858ce523ae52eb8e802 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 27 54 4.4E-71 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 YE0410 0b5149c95aeae858ce523ae52eb8e802 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 64 90 4.4E-71 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 YE0410 0b5149c95aeae858ce523ae52eb8e802 337 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 3 193 1.5E-77 T 22-04-2016 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 YE2463 dd554e0ce150b552b49f3f07a31ee53d 360 Pfam PF00267 Gram-negative porin 28 360 6.9E-130 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 YE2463 dd554e0ce150b552b49f3f07a31ee53d 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 243 260 6.3E-54 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 YE2463 dd554e0ce150b552b49f3f07a31ee53d 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 271 290 6.3E-54 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 YE2463 dd554e0ce150b552b49f3f07a31ee53d 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 95 117 6.3E-54 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 YE2463 dd554e0ce150b552b49f3f07a31ee53d 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 23 39 6.3E-54 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 YE2463 dd554e0ce150b552b49f3f07a31ee53d 360 PRINTS PR00183 E.coli/Salmonella-type porin signature 150 172 6.3E-54 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 YE2463 dd554e0ce150b552b49f3f07a31ee53d 360 SUPERFAMILY SSF56935 23 360 1.83E-73 T 22-04-2016 YE2463 dd554e0ce150b552b49f3f07a31ee53d 360 PANTHER PTHR34501:SF4 3 360 2.9E-187 T 22-04-2016 YE2463 dd554e0ce150b552b49f3f07a31ee53d 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 315 332 1.1E-13 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 YE2463 dd554e0ce150b552b49f3f07a31ee53d 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 152 163 1.1E-13 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 YE2463 dd554e0ce150b552b49f3f07a31ee53d 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 95 105 1.1E-13 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 YE2463 dd554e0ce150b552b49f3f07a31ee53d 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 51 62 1.1E-13 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 YE2463 dd554e0ce150b552b49f3f07a31ee53d 360 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 237 249 1.1E-13 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 YE2463 dd554e0ce150b552b49f3f07a31ee53d 360 Gene3D G3DSA:2.40.160.10 23 360 2.8E-95 T 22-04-2016 IPR023614 Porin domain YE2463 dd554e0ce150b552b49f3f07a31ee53d 360 PANTHER PTHR34501 3 360 2.9E-187 T 22-04-2016 YE1309 779ff0a46a83dbb8a4cf8f0c72abef67 280 PANTHER PTHR11142 19 277 8.7E-102 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 YE1309 779ff0a46a83dbb8a4cf8f0c72abef67 280 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 20 256 5.5E-78 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 YE1309 779ff0a46a83dbb8a4cf8f0c72abef67 280 Gene3D G3DSA:3.30.70.660 124 259 9.5E-47 T 22-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 YE1309 779ff0a46a83dbb8a4cf8f0c72abef67 280 PIRSF PIRSF001430 19 272 8.1E-79 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 YE1309 779ff0a46a83dbb8a4cf8f0c72abef67 280 Pfam PF01416 tRNA pseudouridine synthase 26 120 3.7E-10 T 22-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 YE1309 779ff0a46a83dbb8a4cf8f0c72abef67 280 Pfam PF01416 tRNA pseudouridine synthase 160 262 9.2E-30 T 22-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 YE1309 779ff0a46a83dbb8a4cf8f0c72abef67 280 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 19 261 35.137 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 YE1309 779ff0a46a83dbb8a4cf8f0c72abef67 280 SUPERFAMILY SSF55120 20 275 1.73E-92 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 YE1309 779ff0a46a83dbb8a4cf8f0c72abef67 280 Gene3D G3DSA:3.30.70.580 20 122 1.3E-37 T 22-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 YE2503 10141dc188c0c71b79382129bfa88daf 435 PANTHER PTHR30304 133 434 5.5E-102 T 22-04-2016 YE2503 10141dc188c0c71b79382129bfa88daf 435 SUPERFAMILY SSF142764 18 431 6.28E-132 T 22-04-2016 YE2503 10141dc188c0c71b79382129bfa88daf 435 Pfam PF07005 Putative sugar-binding N-terminal domain 18 241 9.8E-70 T 22-04-2016 IPR010737 Putative sugar-binding, N-terminal domain YE2503 10141dc188c0c71b79382129bfa88daf 435 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 269 426 4.1E-41 T 22-04-2016 IPR031475 Putative nucleotide-binding C-terminal domain YE2503 10141dc188c0c71b79382129bfa88daf 435 PANTHER PTHR30304:SF3 133 434 5.5E-102 T 22-04-2016 YE3716 de0faa0d104375c0db742716e6ba1d59 131 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 16 127 1.5E-20 T 22-04-2016 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III YE1018 24a615dc7c6e850f9a179de71f41f708 303 Hamap MF_00367 GTPase Era [era]. 7 298 35.865 T 22-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 YE1018 24a615dc7c6e850f9a179de71f41f708 303 Gene3D G3DSA:3.40.50.300 9 194 2.2E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1018 24a615dc7c6e850f9a179de71f41f708 303 Pfam PF01926 50S ribosome-binding GTPase 12 126 1.5E-22 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YE1018 24a615dc7c6e850f9a179de71f41f708 303 Gene3D G3DSA:3.30.300.20 195 295 5.3E-41 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta YE1018 24a615dc7c6e850f9a179de71f41f708 303 SUPERFAMILY SSF54814 183 298 1.44E-42 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 YE1018 24a615dc7c6e850f9a179de71f41f708 303 Pfam PF07650 KH domain 210 286 2.5E-19 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 YE1018 24a615dc7c6e850f9a179de71f41f708 303 SUPERFAMILY SSF52540 12 206 6.52E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1018 24a615dc7c6e850f9a179de71f41f708 303 PANTHER PTHR11649 5 303 4.4E-126 T 22-04-2016 YE1018 24a615dc7c6e850f9a179de71f41f708 303 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 12 32 1.0E-5 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YE1018 24a615dc7c6e850f9a179de71f41f708 303 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 80 98 1.0E-5 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YE1018 24a615dc7c6e850f9a179de71f41f708 303 PANTHER PTHR11649:SF3 5 303 4.4E-126 T 22-04-2016 YE1018 24a615dc7c6e850f9a179de71f41f708 303 TIGRFAM TIGR00436 era: GTP-binding protein Era 10 281 4.2E-118 T 22-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 YE1018 24a615dc7c6e850f9a179de71f41f708 303 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 171 4.5E-41 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 YE0799 a9e933679ff673678100201666b2ad5c 188 SUPERFAMILY SSF53383 8 174 3.11E-30 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YE0799 a9e933679ff673678100201666b2ad5c 188 Gene3D G3DSA:3.90.1150.10 89 181 4.5E-11 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YE0799 a9e933679ff673678100201666b2ad5c 188 PANTHER PTHR11751 7 185 1.7E-22 T 22-04-2016 YE0799 a9e933679ff673678100201666b2ad5c 188 PANTHER PTHR11751:SF347 7 185 1.7E-22 T 22-04-2016 YE0799 a9e933679ff673678100201666b2ad5c 188 Gene3D G3DSA:3.40.640.10 6 88 7.7E-22 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YE0799 a9e933679ff673678100201666b2ad5c 188 Pfam PF00155 Aminotransferase class I and II 8 174 8.0E-24 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YE3395 40510febaf14bee50bd88f60ec9917f3 389 SUPERFAMILY SSF51905 2 175 3.3E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE3395 40510febaf14bee50bd88f60ec9917f3 389 SUPERFAMILY SSF51905 265 379 3.3E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE3395 40510febaf14bee50bd88f60ec9917f3 389 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 3 385 7.1E-145 T 22-04-2016 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 KEGG: 00130+1.14.13.-|KEGG: 00140+1.14.13.-|KEGG: 00232+1.14.13.-|KEGG: 00261+1.14.13.-|KEGG: 00340+1.14.13.-|KEGG: 00360+1.14.13.-|KEGG: 00361+1.14.13.-|KEGG: 00362+1.14.13.-|KEGG: 00363+1.14.13.-|KEGG: 00380+1.14.13.-|KEGG: 00403+1.14.13.-|KEGG: 00590+1.14.13.-|KEGG: 00591+1.14.13.-|KEGG: 00622+1.14.13.-|KEGG: 00623+1.14.13.-|KEGG: 00624+1.14.13.-|KEGG: 00625+1.14.13.-|KEGG: 00626+1.14.13.-|KEGG: 00627+1.14.13.-|KEGG: 00640+1.14.13.-|KEGG: 00643+1.14.13.-|KEGG: 00830+1.14.13.-|KEGG: 00903+1.14.13.-|KEGG: 00904+1.14.13.-|KEGG: 00905+1.14.13.-|KEGG: 00906+1.14.13.-|KEGG: 00930+1.14.13.-|KEGG: 00940+1.14.13.-|KEGG: 00941+1.14.13.-|KEGG: 00943+1.14.13.-|KEGG: 00945+1.14.13.-|KEGG: 00950+1.14.13.-|KEGG: 00966+1.14.13.-|KEGG: 00980+1.14.13.-|KEGG: 00982+1.14.13.-|KEGG: 00983+1.14.13.-|UniPathway: UPA00232 YE3395 40510febaf14bee50bd88f60ec9917f3 389 Gene3D G3DSA:3.50.50.60 2 180 1.6E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE3395 40510febaf14bee50bd88f60ec9917f3 389 Gene3D G3DSA:3.50.50.60 266 351 1.6E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE3395 40510febaf14bee50bd88f60ec9917f3 389 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 3 385 4.9E-130 T 22-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 YE3395 40510febaf14bee50bd88f60ec9917f3 389 PANTHER PTHR13789 1 389 2.5E-202 T 22-04-2016 YE3395 40510febaf14bee50bd88f60ec9917f3 389 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 292 305 - T 22-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 YE3395 40510febaf14bee50bd88f60ec9917f3 389 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 9.5E-15 T 22-04-2016 YE3395 40510febaf14bee50bd88f60ec9917f3 389 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 278 293 9.5E-15 T 22-04-2016 YE3395 40510febaf14bee50bd88f60ec9917f3 389 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 9.5E-15 T 22-04-2016 YE3395 40510febaf14bee50bd88f60ec9917f3 389 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 309 9.5E-15 T 22-04-2016 YE3395 40510febaf14bee50bd88f60ec9917f3 389 PANTHER PTHR13789:SF214 1 389 2.5E-202 T 22-04-2016 YE3395 40510febaf14bee50bd88f60ec9917f3 389 Pfam PF01494 FAD binding domain 2 341 2.2E-26 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 YE0581 a5cc9b9411ee14ac6f5e38c30938ce69 333 Pfam PF13602 Zinc-binding dehydrogenase 192 331 1.6E-19 T 22-04-2016 YE0581 a5cc9b9411ee14ac6f5e38c30938ce69 333 SUPERFAMILY SSF50129 9 143 1.2E-30 T 22-04-2016 IPR011032 GroES-like YE0581 a5cc9b9411ee14ac6f5e38c30938ce69 333 PANTHER PTHR11695:SF558 16 331 4.0E-101 T 22-04-2016 YE0581 a5cc9b9411ee14ac6f5e38c30938ce69 333 SMART SM00829 14 331 2.5E-10 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 YE0581 a5cc9b9411ee14ac6f5e38c30938ce69 333 PANTHER PTHR11695 16 331 4.0E-101 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 YE0581 a5cc9b9411ee14ac6f5e38c30938ce69 333 SUPERFAMILY SSF51735 117 281 1.2E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain YE0581 a5cc9b9411ee14ac6f5e38c30938ce69 333 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 89 2.2E-8 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 YE0581 a5cc9b9411ee14ac6f5e38c30938ce69 333 Gene3D G3DSA:3.40.50.720 154 243 2.3E-11 T 22-04-2016 IPR016040 NAD(P)-binding domain YE0581 a5cc9b9411ee14ac6f5e38c30938ce69 333 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 12 331 2.1E-118 T 22-04-2016 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 YE0581 a5cc9b9411ee14ac6f5e38c30938ce69 333 Gene3D G3DSA:3.90.180.10 25 153 1.4E-34 T 22-04-2016 IPR011032 GroES-like YE4016 7e2dd1baf10b16bfef7bb4384c7693d5 261 TIGRFAM TIGR01252 acetolac_decarb: alpha-acetolactate decarboxylase 31 258 3.3E-94 T 22-04-2016 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939|UniPathway: UPA00626 YE4016 7e2dd1baf10b16bfef7bb4384c7693d5 261 Gene3D G3DSA:3.30.1330.80 107 227 4.9E-50 T 22-04-2016 YE4016 7e2dd1baf10b16bfef7bb4384c7693d5 261 PANTHER PTHR35524 13 261 5.2E-85 T 22-04-2016 YE4016 7e2dd1baf10b16bfef7bb4384c7693d5 261 PIRSF PIRSF001332 12 261 7.2E-97 T 22-04-2016 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939|UniPathway: UPA00626 YE4016 7e2dd1baf10b16bfef7bb4384c7693d5 261 SUPERFAMILY SSF117856 31 260 2.41E-85 T 22-04-2016 YE4016 7e2dd1baf10b16bfef7bb4384c7693d5 261 Pfam PF03306 Alpha-acetolactate decarboxylase 31 248 1.7E-87 T 22-04-2016 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939|UniPathway: UPA00626 YE3344A 7e391d0dac0db2bb3876fbaaaaaeddf4 197 Pfam PF11612 Type II secretion system (T2SS), protein J 89 188 1.7E-12 T 22-04-2016 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 YE3344A 7e391d0dac0db2bb3876fbaaaaaeddf4 197 PANTHER PTHR39583 1 197 1.6E-24 T 22-04-2016 YE3344A 7e391d0dac0db2bb3876fbaaaaaeddf4 197 PANTHER PTHR39583:SF1 1 197 1.6E-24 T 22-04-2016 YE3344A 7e391d0dac0db2bb3876fbaaaaaeddf4 197 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site YE3344A 7e391d0dac0db2bb3876fbaaaaaeddf4 197 Gene3D G3DSA:3.10.610.10 41 133 2.7E-7 T 22-04-2016 YE3344A 7e391d0dac0db2bb3876fbaaaaaeddf4 197 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 8 189 1.5E-26 T 22-04-2016 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 YE3344A 7e391d0dac0db2bb3876fbaaaaaeddf4 197 SUPERFAMILY SSF54523 42 195 3.77E-32 T 22-04-2016 YE3344A 7e391d0dac0db2bb3876fbaaaaaeddf4 197 Gene3D G3DSA:2.10.70.20 147 193 2.6E-13 T 22-04-2016 YE4072 366ca4cf100e1f704d9c94f3408e6edc 1161 SUPERFAMILY SSF48452 580 665 1.59E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YE4072 366ca4cf100e1f704d9c94f3408e6edc 1161 PANTHER PTHR23083 116 154 3.4E-31 T 22-04-2016 YE4072 366ca4cf100e1f704d9c94f3408e6edc 1161 PANTHER PTHR23083 74 99 3.4E-31 T 22-04-2016 YE4072 366ca4cf100e1f704d9c94f3408e6edc 1161 PANTHER PTHR23083 604 743 3.4E-31 T 22-04-2016 YE4072 366ca4cf100e1f704d9c94f3408e6edc 1161 PANTHER PTHR23083 278 563 3.4E-31 T 22-04-2016 YE4072 366ca4cf100e1f704d9c94f3408e6edc 1161 Gene3D G3DSA:1.25.40.10 268 339 7.0E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YE4072 366ca4cf100e1f704d9c94f3408e6edc 1161 Gene3D G3DSA:1.25.40.10 61 211 7.0E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YE4072 366ca4cf100e1f704d9c94f3408e6edc 1161 Gene3D G3DSA:1.25.40.10 466 559 8.2E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YE4072 366ca4cf100e1f704d9c94f3408e6edc 1161 Gene3D G3DSA:1.25.40.10 600 752 8.2E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YE4072 366ca4cf100e1f704d9c94f3408e6edc 1161 Pfam PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) 807 1140 7.6E-121 T 22-04-2016 IPR008410 Cellulose synthase operon C, C-terminal GO:0019867|GO:0030244 UniPathway: UPA00694 YE4072 366ca4cf100e1f704d9c94f3408e6edc 1161 Pfam PF14559 Tetratricopeptide repeat 285 339 1.5E-7 T 22-04-2016 YE4072 366ca4cf100e1f704d9c94f3408e6edc 1161 Pfam PF14559 Tetratricopeptide repeat 617 668 2.1E-9 T 22-04-2016 YE4072 366ca4cf100e1f704d9c94f3408e6edc 1161 Pfam PF13432 Tetratricopeptide repeat 361 422 0.011 T 22-04-2016 YE4072 366ca4cf100e1f704d9c94f3408e6edc 1161 Pfam PF13432 Tetratricopeptide repeat 474 520 0.0036 T 22-04-2016 YE4072 366ca4cf100e1f704d9c94f3408e6edc 1161 SMART SM00028 389 422 0.047 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 YE4072 366ca4cf100e1f704d9c94f3408e6edc 1161 SMART SM00028 307 340 1.6 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 YE4072 366ca4cf100e1f704d9c94f3408e6edc 1161 SMART SM00028 355 388 68.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 YE4072 366ca4cf100e1f704d9c94f3408e6edc 1161 SMART SM00028 465 498 0.62 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 YE4072 366ca4cf100e1f704d9c94f3408e6edc 1161 SUPERFAMILY SSF48452 357 579 4.64E-19 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YE4072 366ca4cf100e1f704d9c94f3408e6edc 1161 SUPERFAMILY SSF48452 74 339 1.52E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YE4072 366ca4cf100e1f704d9c94f3408e6edc 1161 Gene3D G3DSA:1.25.40.10 358 447 2.3E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YE3903 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PANTHER PTHR10906 18 443 5.9E-236 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 YE3903 c9ddd3ae7a6ecd2a11613e657fea94a3 443 Gene3D G3DSA:1.10.3370.10 17 437 1.8E-167 T 22-04-2016 IPR023201 SecY subunit domain YE3903 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 315 337 1.3E-98 T 22-04-2016 YE3903 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 402 420 1.3E-98 T 22-04-2016 YE3903 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 272 291 1.3E-98 T 22-04-2016 YE3903 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 370 388 1.3E-98 T 22-04-2016 YE3903 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 1.3E-98 T 22-04-2016 YE3903 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 1.3E-98 T 22-04-2016 YE3903 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 154 179 1.3E-98 T 22-04-2016 YE3903 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 180 203 1.3E-98 T 22-04-2016 YE3903 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 1.3E-98 T 22-04-2016 YE3903 c9ddd3ae7a6ecd2a11613e657fea94a3 443 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 22-04-2016 IPR030659 SecY conserved site YE3903 c9ddd3ae7a6ecd2a11613e657fea94a3 443 Hamap MF_01465 Protein translocase subunit SecY [secY]. 10 433 29.984 T 22-04-2016 IPR026593 Protein translocase subunit SecY YE3903 c9ddd3ae7a6ecd2a11613e657fea94a3 443 SUPERFAMILY SSF103491 16 424 6.28E-134 T 22-04-2016 IPR023201 SecY subunit domain YE3903 c9ddd3ae7a6ecd2a11613e657fea94a3 443 ProSitePatterns PS00756 Protein secY signature 2. 173 190 - T 22-04-2016 IPR030659 SecY conserved site YE3903 c9ddd3ae7a6ecd2a11613e657fea94a3 443 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 429 2.9E-141 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 YE3903 c9ddd3ae7a6ecd2a11613e657fea94a3 443 Pfam PF00344 SecY translocase 76 417 9.1E-120 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 YE3903 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PIRSF PIRSF004557 11 441 1.4E-123 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 YE3903 c9ddd3ae7a6ecd2a11613e657fea94a3 443 PANTHER PTHR10906:SF2 18 443 5.9E-236 T 22-04-2016 YE4025 6c945bd6dc6ac047a21ac471f5484c96 298 Gene3D G3DSA:3.20.20.150 2 295 2.1E-83 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YE4025 6c945bd6dc6ac047a21ac471f5484c96 298 SUPERFAMILY SSF51658 7 295 8.12E-57 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YE4025 6c945bd6dc6ac047a21ac471f5484c96 298 PANTHER PTHR12110:SF4 9 296 3.0E-99 T 22-04-2016 IPR030823 IolE/MocC family KEGG: 00562+4.2.1.44 YE4025 6c945bd6dc6ac047a21ac471f5484c96 298 PANTHER PTHR12110 9 296 3.0E-99 T 22-04-2016 YE4025 6c945bd6dc6ac047a21ac471f5484c96 298 Hamap MF_01672 Inosose dehydratase [iolE]. 1 298 56.192 T 22-04-2016 IPR023952 Inosose dehydratase GO:0019310|GO:0030145|GO:0050114 KEGG: 00562+4.2.1.44 YE4025 6c945bd6dc6ac047a21ac471f5484c96 298 Pfam PF01261 Xylose isomerase-like TIM barrel 50 250 2.8E-25 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YE4025 6c945bd6dc6ac047a21ac471f5484c96 298 TIGRFAM TIGR04379 myo_inos_iolE: myo-inosose-2 dehydratase 6 295 1.1E-119 T 22-04-2016 IPR030823 IolE/MocC family KEGG: 00562+4.2.1.44 YE4040 c736416031e873faae216f0dff7e279d 148 Pfam PF02310 B12 binding domain 5 95 1.4E-11 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 YE4040 c736416031e873faae216f0dff7e279d 148 TIGRFAM TIGR01501 MthylAspMutase: methylaspartate mutase, S subunit 4 135 1.9E-66 T 22-04-2016 IPR006394 Glutamate mutase sigma subunit GO:0016866|GO:0019670 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728|UniPathway: UPA00561 YE4040 c736416031e873faae216f0dff7e279d 148 SUPERFAMILY SSF52242 3 134 2.09E-32 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 YE4040 c736416031e873faae216f0dff7e279d 148 Hamap MF_00526 Glutamate mutase sigma subunit [glmS]. 1 137 35.999 T 22-04-2016 IPR006394 Glutamate mutase sigma subunit GO:0016866|GO:0019670 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728|UniPathway: UPA00561 YE4040 c736416031e873faae216f0dff7e279d 148 Gene3D G3DSA:3.40.50.280 3 135 1.6E-32 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 YE1988 3461609b1e2f41f7702fd29ebd88e3fb 233 Hamap MF_00478 Electron transport complex subunit RsxE [rsxE]. 1 210 28.193 T 22-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 YE1988 3461609b1e2f41f7702fd29ebd88e3fb 233 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 7 209 4.6E-85 T 22-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 YE1988 3461609b1e2f41f7702fd29ebd88e3fb 233 Pfam PF02508 Rnf-Nqr subunit, membrane protein 7 199 8.1E-64 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 YE1988 3461609b1e2f41f7702fd29ebd88e3fb 233 PANTHER PTHR30586:SF0 1 220 1.4E-143 T 22-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 YE1988 3461609b1e2f41f7702fd29ebd88e3fb 233 PIRSF PIRSF006102 1 219 1.6E-77 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 YE1988 3461609b1e2f41f7702fd29ebd88e3fb 233 PANTHER PTHR30586 1 220 1.4E-143 T 22-04-2016 YE2850 b375bdec4597f56fa0940556579dc1c9 213 Gene3D G3DSA:2.30.110.10 15 190 1.6E-61 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 YE2850 b375bdec4597f56fa0940556579dc1c9 213 PANTHER PTHR33798:SF4 1 208 8.3E-82 T 22-04-2016 YE2850 b375bdec4597f56fa0940556579dc1c9 213 SUPERFAMILY SSF50475 5 199 3.78E-47 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 YE2850 b375bdec4597f56fa0940556579dc1c9 213 SMART SM00903 26 178 9.2E-16 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 YE2850 b375bdec4597f56fa0940556579dc1c9 213 Pfam PF01613 Flavin reductase like domain 28 170 3.5E-17 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 YE2850 b375bdec4597f56fa0940556579dc1c9 213 PANTHER PTHR33798 1 208 8.3E-82 T 22-04-2016 YE2606 48d6f5f4e1ba56c3d846bfbb188050b1 333 PANTHER PTHR32196 16 331 1.4E-69 T 22-04-2016 YE2606 48d6f5f4e1ba56c3d846bfbb188050b1 333 Pfam PF02653 Branched-chain amino acid transport system / permease component 46 314 1.0E-36 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YE2606 48d6f5f4e1ba56c3d846bfbb188050b1 333 PANTHER PTHR32196:SF21 16 331 1.4E-69 T 22-04-2016 YE3010 0a03541712e65bcdaeca082593b6b035 350 Pfam PF00990 Diguanylate cyclase, GGDEF domain 190 345 5.1E-45 T 22-04-2016 IPR000160 GGDEF domain YE3010 0a03541712e65bcdaeca082593b6b035 350 Pfam PF05230 MASE2 domain 19 106 2.0E-32 T 22-04-2016 IPR007894 MASE2 YE3010 0a03541712e65bcdaeca082593b6b035 350 PANTHER PTHR10799:SF728 222 348 3.5E-27 T 22-04-2016 YE3010 0a03541712e65bcdaeca082593b6b035 350 SUPERFAMILY SSF55073 194 348 2.35E-46 T 22-04-2016 IPR029787 Nucleotide cyclase YE3010 0a03541712e65bcdaeca082593b6b035 350 PANTHER PTHR10799 222 348 3.5E-27 T 22-04-2016 YE3010 0a03541712e65bcdaeca082593b6b035 350 Gene3D G3DSA:3.30.70.270 191 348 2.2E-48 T 22-04-2016 YE3010 0a03541712e65bcdaeca082593b6b035 350 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 187 348 6.6E-54 T 22-04-2016 IPR000160 GGDEF domain YE3010 0a03541712e65bcdaeca082593b6b035 350 SMART SM00267 178 349 1.1E-57 T 22-04-2016 IPR000160 GGDEF domain YE1433 e13df43e3da68dc0cb6f1dc3cc88b22a 194 Pfam PF00877 NlpC/P60 family 82 185 1.5E-31 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- YE1433 e13df43e3da68dc0cb6f1dc3cc88b22a 194 Gene3D G3DSA:3.90.1720.10 71 189 2.6E-42 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- YE1433 e13df43e3da68dc0cb6f1dc3cc88b22a 194 PANTHER PTHR21666:SF210 7 37 2.7E-96 T 22-04-2016 YE1433 e13df43e3da68dc0cb6f1dc3cc88b22a 194 PANTHER PTHR21666:SF210 73 189 2.7E-96 T 22-04-2016 YE1433 e13df43e3da68dc0cb6f1dc3cc88b22a 194 SUPERFAMILY SSF54001 70 188 3.27E-39 T 22-04-2016 YE1433 e13df43e3da68dc0cb6f1dc3cc88b22a 194 PANTHER PTHR21666 7 37 2.7E-96 T 22-04-2016 YE1433 e13df43e3da68dc0cb6f1dc3cc88b22a 194 PANTHER PTHR21666 73 189 2.7E-96 T 22-04-2016 YE2938 21d7b2a9a96e948a5ba1c04de4b20468 379 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 362 2.0E-109 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 YE2938 21d7b2a9a96e948a5ba1c04de4b20468 379 PANTHER PTHR30365 1 379 2.1E-197 T 22-04-2016 YE2938 21d7b2a9a96e948a5ba1c04de4b20468 379 PANTHER PTHR30365:SF6 1 379 2.1E-197 T 22-04-2016 YE2938 21d7b2a9a96e948a5ba1c04de4b20468 379 PIRSF PIRSF000267 2 378 2.8E-128 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 YE2938 21d7b2a9a96e948a5ba1c04de4b20468 379 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 379 1.2E-189 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 YE0213 5115281711a8a19287c60a42069ab4c9 424 Hamap MF_00753 Anaerobic glycerol-3-phosphate dehydrogenase subunit B [glpB]. 1 420 51.086 T 22-04-2016 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|UniPathway: UPA00618 YE0213 5115281711a8a19287c60a42069ab4c9 424 Gene3D G3DSA:3.50.50.60 140 179 1.9E-20 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE0213 5115281711a8a19287c60a42069ab4c9 424 Gene3D G3DSA:3.50.50.60 254 419 1.9E-20 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE0213 5115281711a8a19287c60a42069ab4c9 424 Gene3D G3DSA:3.50.50.60 1 62 1.9E-20 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE0213 5115281711a8a19287c60a42069ab4c9 424 SUPERFAMILY SSF51905 254 419 9.04E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE0213 5115281711a8a19287c60a42069ab4c9 424 SUPERFAMILY SSF51905 64 74 9.04E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE0213 5115281711a8a19287c60a42069ab4c9 424 SUPERFAMILY SSF51905 133 200 9.04E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE0213 5115281711a8a19287c60a42069ab4c9 424 SUPERFAMILY SSF51905 1 35 9.04E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE0213 5115281711a8a19287c60a42069ab4c9 424 PIRSF PIRSF000141 1 423 2.3E-173 T 22-04-2016 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|UniPathway: UPA00618 YE0213 5115281711a8a19287c60a42069ab4c9 424 TIGRFAM TIGR03378 glycerol3P_GlpB: glycerol-3-phosphate dehydrogenase, anaerobic, B subunit 3 417 1.1E-180 T 22-04-2016 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|UniPathway: UPA00618 YE0213 5115281711a8a19287c60a42069ab4c9 424 Pfam PF00890 FAD binding domain 4 404 9.5E-62 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain YE0463 25097734ae0a5c1f1a8d4b52c3bd6e8d 371 PANTHER PTHR24220 5 359 1.3E-154 T 22-04-2016 YE0463 25097734ae0a5c1f1a8d4b52c3bd6e8d 371 SUPERFAMILY SSF50331 236 366 1.7E-21 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal YE0463 25097734ae0a5c1f1a8d4b52c3bd6e8d 371 Gene3D G3DSA:3.40.50.300 3 235 2.4E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0463 25097734ae0a5c1f1a8d4b52c3bd6e8d 371 PANTHER PTHR24220:SF151 5 359 1.3E-154 T 22-04-2016 YE0463 25097734ae0a5c1f1a8d4b52c3bd6e8d 371 Pfam PF00005 ABC transporter 20 161 4.3E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE0463 25097734ae0a5c1f1a8d4b52c3bd6e8d 371 SUPERFAMILY SSF52540 4 241 8.96E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0463 25097734ae0a5c1f1a8d4b52c3bd6e8d 371 SMART SM00382 28 211 2.1E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YE0463 25097734ae0a5c1f1a8d4b52c3bd6e8d 371 Pfam PF08402 TOBE domain 287 358 1.3E-8 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 YE0463 25097734ae0a5c1f1a8d4b52c3bd6e8d 371 Gene3D G3DSA:2.40.50.140 289 350 5.2E-9 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE0463 25097734ae0a5c1f1a8d4b52c3bd6e8d 371 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE1134 daf76027219e498abbfedb58c0216bdb 339 Pfam PF01548 Transposase 6 146 1.8E-15 T 22-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 YE1134 daf76027219e498abbfedb58c0216bdb 339 Pfam PF02371 Transposase IS116/IS110/IS902 family 211 287 2.5E-26 T 22-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 YE1134 daf76027219e498abbfedb58c0216bdb 339 PANTHER PTHR33055:SF2 2 334 1.3E-137 T 22-04-2016 YE1134 daf76027219e498abbfedb58c0216bdb 339 PANTHER PTHR33055 2 334 1.3E-137 T 22-04-2016 YE0008 f42824be6a2b4de77255e1d6566b5977 139 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 139 32.878 T 22-04-2016 IPR023064 D-ribose pyranase GO:0016872 UniPathway: UPA00916 YE0008 f42824be6a2b4de77255e1d6566b5977 139 SUPERFAMILY SSF102546 1 139 3.79E-45 T 22-04-2016 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 YE0008 f42824be6a2b4de77255e1d6566b5977 139 PANTHER PTHR37831 2 139 1.2E-71 T 22-04-2016 YE0008 f42824be6a2b4de77255e1d6566b5977 139 Gene3D G3DSA:3.40.1650.10 1 139 2.1E-44 T 22-04-2016 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 YE0008 f42824be6a2b4de77255e1d6566b5977 139 PANTHER PTHR37831:SF1 2 139 1.2E-71 T 22-04-2016 YE0008 f42824be6a2b4de77255e1d6566b5977 139 Pfam PF05025 RbsD / FucU transport protein family 1 138 2.7E-50 T 22-04-2016 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 YE1524 d05cb03c2bcc435df66c109c69695ac8 164 PANTHER PTHR30154:SF0 4 162 3.7E-107 T 22-04-2016 YE1524 d05cb03c2bcc435df66c109c69695ac8 164 SMART SM00344 12 121 7.5E-55 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 YE1524 d05cb03c2bcc435df66c109c69695ac8 164 PANTHER PTHR30154 4 162 3.7E-107 T 22-04-2016 YE1524 d05cb03c2bcc435df66c109c69695ac8 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 58 4.8E-21 T 22-04-2016 YE1524 d05cb03c2bcc435df66c109c69695ac8 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 22-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site YE1524 d05cb03c2bcc435df66c109c69695ac8 164 SUPERFAMILY SSF46785 12 70 4.55E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1524 d05cb03c2bcc435df66c109c69695ac8 164 SUPERFAMILY SSF54909 74 158 2.01E-22 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel YE1524 d05cb03c2bcc435df66c109c69695ac8 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 6.2E-23 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 YE1524 d05cb03c2bcc435df66c109c69695ac8 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 6.2E-23 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 YE1524 d05cb03c2bcc435df66c109c69695ac8 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 6.2E-23 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 YE1524 d05cb03c2bcc435df66c109c69695ac8 164 Gene3D G3DSA:1.10.10.10 13 64 3.2E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1524 d05cb03c2bcc435df66c109c69695ac8 164 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 7.6E-25 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain YE1524 d05cb03c2bcc435df66c109c69695ac8 164 Gene3D G3DSA:3.30.70.920 65 161 1.1E-33 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain YE3608 dd02f623fe0876c9f18ce14a9e083779 342 SUPERFAMILY SSF54862 38 330 3.84E-68 T 22-04-2016 YE3608 dd02f623fe0876c9f18ce14a9e083779 342 Gene3D G3DSA:3.30.70.20 193 232 1.3E-26 T 22-04-2016 YE3608 dd02f623fe0876c9f18ce14a9e083779 342 Gene3D G3DSA:3.30.70.20 37 121 1.3E-26 T 22-04-2016 YE3608 dd02f623fe0876c9f18ce14a9e083779 342 PANTHER PTHR11938:SF68 86 214 7.3E-81 T 22-04-2016 YE3608 dd02f623fe0876c9f18ce14a9e083779 342 PANTHER PTHR11938 33 61 7.3E-81 T 22-04-2016 YE3608 dd02f623fe0876c9f18ce14a9e083779 342 PANTHER PTHR11938:SF68 33 61 7.3E-81 T 22-04-2016 YE3608 dd02f623fe0876c9f18ce14a9e083779 342 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 150 161 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YE3608 dd02f623fe0876c9f18ce14a9e083779 342 Gene3D G3DSA:3.30.70.20 122 154 5.6E-12 T 22-04-2016 YE3608 dd02f623fe0876c9f18ce14a9e083779 342 PANTHER PTHR11938 86 214 7.3E-81 T 22-04-2016 YE3608 dd02f623fe0876c9f18ce14a9e083779 342 Gene3D G3DSA:3.30.70.20 155 192 7.0E-9 T 22-04-2016 YE3608 dd02f623fe0876c9f18ce14a9e083779 342 Pfam PF13247 4Fe-4S dicluster domain 110 212 9.1E-23 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YE0572 9282603d9897632cb3aefbcf9451fac5 407 PANTHER PTHR21110 2 407 3.8E-170 T 22-04-2016 YE0572 9282603d9897632cb3aefbcf9451fac5 407 Hamap MF_00740 Phosphopentomutase [deoB]. 1 407 56.335 T 22-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 YE0572 9282603d9897632cb3aefbcf9451fac5 407 SUPERFAMILY SSF53649 1 114 6.87E-74 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 YE0572 9282603d9897632cb3aefbcf9451fac5 407 SUPERFAMILY SSF53649 236 407 6.87E-74 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 YE0572 9282603d9897632cb3aefbcf9451fac5 407 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 404 4.8E-196 T 22-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 YE0572 9282603d9897632cb3aefbcf9451fac5 407 Pfam PF01676 Metalloenzyme superfamily 2 398 8.6E-44 T 22-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 YE0572 9282603d9897632cb3aefbcf9451fac5 407 PANTHER PTHR21110:SF0 2 407 3.8E-170 T 22-04-2016 YE0572 9282603d9897632cb3aefbcf9451fac5 407 Gene3D G3DSA:3.40.720.10 240 407 1.7E-76 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 YE0572 9282603d9897632cb3aefbcf9451fac5 407 Gene3D G3DSA:3.40.720.10 1 113 1.7E-76 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 YE0572 9282603d9897632cb3aefbcf9451fac5 407 SUPERFAMILY SSF143856 117 235 1.31E-50 T 22-04-2016 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 YE0572 9282603d9897632cb3aefbcf9451fac5 407 Gene3D G3DSA:3.30.70.1250 114 235 1.9E-53 T 22-04-2016 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 YE0572 9282603d9897632cb3aefbcf9451fac5 407 PIRSF PIRSF001491 1 407 2.2E-167 T 22-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 YE1178 ff9c9caca08a80e714e4bed32cee9ece 259 SUPERFAMILY SSF101082 33 231 8.89E-36 T 22-04-2016 IPR023220 Type IV secretion system, VirB5-domain YE1178 ff9c9caca08a80e714e4bed32cee9ece 259 TIGRFAM TIGR02780 TrbJ_Ti: P-type conjugative transfer protein TrbJ 14 259 5.1E-51 T 22-04-2016 IPR014147 Type IV conjugative transfer protein TrbJ YE3193 a23509c49a4caf03e3fbb716511c28c1 256 SUPERFAMILY SSF53335 12 248 7.37E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE3193 a23509c49a4caf03e3fbb716511c28c1 256 PANTHER PTHR10108:SF835 9 250 6.5E-93 T 22-04-2016 YE3193 a23509c49a4caf03e3fbb716511c28c1 256 Gene3D G3DSA:3.40.50.150 34 255 2.8E-50 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE3193 a23509c49a4caf03e3fbb716511c28c1 256 Pfam PF08241 Methyltransferase domain 50 146 2.2E-25 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 YE3193 a23509c49a4caf03e3fbb716511c28c1 256 PANTHER PTHR10108 9 250 6.5E-93 T 22-04-2016 YE2671 b39643be31fe396ff28cf2e9a825762e 102 SUPERFAMILY SSF51735 21 56 1.32E-11 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2671 b39643be31fe396ff28cf2e9a825762e 102 Pfam PF00106 short chain dehydrogenase 20 56 2.7E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE2671 b39643be31fe396ff28cf2e9a825762e 102 Gene3D G3DSA:3.40.50.720 21 58 2.5E-11 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2707 98e09057fbfc0f637046aee37d761b1c 352 Gene3D G3DSA:1.10.1610.10 1 71 3.8E-29 T 22-04-2016 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 YE2707 98e09057fbfc0f637046aee37d761b1c 352 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 15 345 2.5E-118 T 22-04-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 YE2707 98e09057fbfc0f637046aee37d761b1c 352 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 13 347 33.139 T 22-04-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 YE2707 98e09057fbfc0f637046aee37d761b1c 352 SUPERFAMILY SSF52733 6 346 3.4E-110 T 22-04-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 YE2707 98e09057fbfc0f637046aee37d761b1c 352 Gene3D G3DSA:3.40.50.10210 72 328 3.4E-97 T 22-04-2016 YE2707 98e09057fbfc0f637046aee37d761b1c 352 Pfam PF02277 Phosphoribosyltransferase 11 344 8.6E-117 T 22-04-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 YE2707 98e09057fbfc0f637046aee37d761b1c 352 PANTHER PTHR21712:SF4 4 348 2.4E-108 T 22-04-2016 YE2707 98e09057fbfc0f637046aee37d761b1c 352 PANTHER PTHR21712 4 348 2.4E-108 T 22-04-2016 YE3254 149341c122956ed9072e44ad7c6bd33e 217 PANTHER PTHR30450 1 217 3.4E-123 T 22-04-2016 YE3254 149341c122956ed9072e44ad7c6bd33e 217 PANTHER PTHR30450:SF1 1 217 3.4E-123 T 22-04-2016 YE3254 149341c122956ed9072e44ad7c6bd33e 217 Gene3D G3DSA:1.10.3720.10 10 214 1.2E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE3254 149341c122956ed9072e44ad7c6bd33e 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 214 1.3E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE3254 149341c122956ed9072e44ad7c6bd33e 217 SUPERFAMILY SSF161098 10 201 9.29E-48 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE1622 26a4d0148f89c521e6253f09df7a91a8 373 Hamap MF_00515 N-methyl-L-tryptophan oxidase [solA]. 1 371 76.442 T 22-04-2016 IPR023493 N-methyl-L-tryptophan oxidase MTOX GO:0050131|GO:0050660|GO:0055114 YE1622 26a4d0148f89c521e6253f09df7a91a8 373 SUPERFAMILY SSF51905 313 371 9.32E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE1622 26a4d0148f89c521e6253f09df7a91a8 373 SUPERFAMILY SSF51905 2 216 9.32E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE1622 26a4d0148f89c521e6253f09df7a91a8 373 PANTHER PTHR10961 1 370 3.5E-117 T 22-04-2016 YE1622 26a4d0148f89c521e6253f09df7a91a8 373 Gene3D G3DSA:3.50.50.60 2 57 3.3E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE1622 26a4d0148f89c521e6253f09df7a91a8 373 Gene3D G3DSA:3.50.50.60 316 372 3.3E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE1622 26a4d0148f89c521e6253f09df7a91a8 373 Gene3D G3DSA:3.50.50.60 146 208 3.3E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE1622 26a4d0148f89c521e6253f09df7a91a8 373 PANTHER PTHR10961:SF7 1 370 3.5E-117 T 22-04-2016 YE1622 26a4d0148f89c521e6253f09df7a91a8 373 SUPERFAMILY SSF54373 213 313 2.2E-19 T 22-04-2016 YE1622 26a4d0148f89c521e6253f09df7a91a8 373 Pfam PF01266 FAD dependent oxidoreductase 4 350 1.9E-46 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 YE1622 26a4d0148f89c521e6253f09df7a91a8 373 Gene3D G3DSA:3.30.9.10 59 145 5.1E-51 T 22-04-2016 YE1622 26a4d0148f89c521e6253f09df7a91a8 373 Gene3D G3DSA:3.30.9.10 211 313 5.1E-51 T 22-04-2016 YE2843 f0b6029e4df0c3c8dde6f795937d05d9 169 SUPERFAMILY SSF47240 11 167 1.67E-48 T 22-04-2016 IPR009078 Ferritin-like superfamily YE2843 f0b6029e4df0c3c8dde6f795937d05d9 169 Gene3D G3DSA:1.20.1260.10 2 167 1.8E-50 T 22-04-2016 IPR012347 Ferritin-related YE2843 f0b6029e4df0c3c8dde6f795937d05d9 169 PANTHER PTHR30295 9 168 7.1E-87 T 22-04-2016 YE2843 f0b6029e4df0c3c8dde6f795937d05d9 169 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 51 67 2.0E-12 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 YE2843 f0b6029e4df0c3c8dde6f795937d05d9 169 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 144 162 2.0E-12 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 YE2843 f0b6029e4df0c3c8dde6f795937d05d9 169 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 75 91 2.0E-12 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 YE2843 f0b6029e4df0c3c8dde6f795937d05d9 169 ProSitePatterns PS00818 Dps protein family signature 1. 51 67 - T 22-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 YE2843 f0b6029e4df0c3c8dde6f795937d05d9 169 PIRSF PIRSF005900 9 169 2.0E-40 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 YE2843 f0b6029e4df0c3c8dde6f795937d05d9 169 Pfam PF00210 Ferritin-like domain 30 168 4.5E-21 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 YE2843 f0b6029e4df0c3c8dde6f795937d05d9 169 Hamap MF_01441 DNA protection during starvation protein [dps]. 1 167 44.727 T 22-04-2016 IPR023067 DNA protection during starvation protein, gammaproteobacteria GO:0016722|GO:0055114 YE2843 f0b6029e4df0c3c8dde6f795937d05d9 169 PANTHER PTHR30295:SF4 9 168 7.1E-87 T 22-04-2016 YE3785 b8a84f388325c591c00091a61ee1341d 121 Pfam PF14272 Glycine-rich SFCGS 4 117 3.0E-61 T 22-04-2016 IPR020034 Conserved hypothetical protein CHP03577, EF0830/AHA3911 YE3785 b8a84f388325c591c00091a61ee1341d 121 TIGRFAM TIGR03577 EF_0830: conserved hypothetical protein EF_0830/AHA_3911 4 118 3.8E-67 T 22-04-2016 IPR020034 Conserved hypothetical protein CHP03577, EF0830/AHA3911 YE0453 98bd685b476b022b8df75f00c262edb5 97 Pfam PF01541 GIY-YIG catalytic domain 6 77 1.8E-13 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily YE0453 98bd685b476b022b8df75f00c262edb5 97 PANTHER PTHR34477 1 96 7.2E-39 T 22-04-2016 YE0453 98bd685b476b022b8df75f00c262edb5 97 PANTHER PTHR34477:SF1 1 96 7.2E-39 T 22-04-2016 YE0453 98bd685b476b022b8df75f00c262edb5 97 SUPERFAMILY SSF82771 5 76 5.23E-12 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily YE0453 98bd685b476b022b8df75f00c262edb5 97 Hamap MF_01029 UPF0213 protein YhbQ [yhbQ]. 3 95 31.594 T 22-04-2016 IPR022992 Uncharacterised protein family UPF0213, GIY-YIG endonuclease YE2757 9bb6c63e84a654924ce1479255091b2b 369 PANTHER PTHR10366 316 354 3.4E-127 T 22-04-2016 YE2757 9bb6c63e84a654924ce1479255091b2b 369 PANTHER PTHR10366 3 288 3.4E-127 T 22-04-2016 YE2757 9bb6c63e84a654924ce1479255091b2b 369 Gene3D G3DSA:3.40.50.720 3 274 7.5E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2757 9bb6c63e84a654924ce1479255091b2b 369 Pfam PF07993 Male sterility protein 6 237 4.6E-32 T 22-04-2016 IPR013120 Male sterility, NAD-binding Reactome: REACT_22258 YE2757 9bb6c63e84a654924ce1479255091b2b 369 PANTHER PTHR10366:SF382 3 288 3.4E-127 T 22-04-2016 YE2757 9bb6c63e84a654924ce1479255091b2b 369 PANTHER PTHR10366:SF382 316 354 3.4E-127 T 22-04-2016 YE2757 9bb6c63e84a654924ce1479255091b2b 369 SUPERFAMILY SSF51735 2 288 9.0E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2757 9bb6c63e84a654924ce1479255091b2b 369 SUPERFAMILY SSF51735 318 353 9.0E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2672 4d1a2648c0b3df9dad8922e26f5bfb42 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 59 1.1E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YE2672 4d1a2648c0b3df9dad8922e26f5bfb42 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 6.0E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YE2672 4d1a2648c0b3df9dad8922e26f5bfb42 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 6.0E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YE2672 4d1a2648c0b3df9dad8922e26f5bfb42 194 SUPERFAMILY SSF48498 81 189 1.78E-22 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal YE2672 4d1a2648c0b3df9dad8922e26f5bfb42 194 Gene3D G3DSA:1.10.10.60 5 59 9.2E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE2672 4d1a2648c0b3df9dad8922e26f5bfb42 194 PANTHER PTHR30328 6 193 5.7E-32 T 22-04-2016 YE2672 4d1a2648c0b3df9dad8922e26f5bfb42 194 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site YE2672 4d1a2648c0b3df9dad8922e26f5bfb42 194 Gene3D G3DSA:1.10.357.10 60 189 1.2E-38 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 YE2672 4d1a2648c0b3df9dad8922e26f5bfb42 194 SUPERFAMILY SSF46689 2 77 1.85E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE2672 4d1a2648c0b3df9dad8922e26f5bfb42 194 PANTHER PTHR30328:SF18 6 193 5.7E-32 T 22-04-2016 YE1984 bb566d3a9e49682cb3ff375657cf9b89 411 SUPERFAMILY SSF58100 51 405 8.37E-62 T 22-04-2016 YE1984 bb566d3a9e49682cb3ff375657cf9b89 411 Gene3D G3DSA:1.20.1170.10 123 396 1.1E-5 T 22-04-2016 YE0642 b93ad1c0afaff802e31618563ec9cbd9 320 Pfam PF01547 Bacterial extracellular solute-binding protein 33 265 1.2E-18 T 22-04-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 YE0642 b93ad1c0afaff802e31618563ec9cbd9 320 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 12 314 2.2E-147 T 22-04-2016 IPR005948 Thiamine ABC transporter periplasmic binding protein GO:0005215|GO:0006810|GO:0015888|GO:0030288|GO:0030975 YE0642 b93ad1c0afaff802e31618563ec9cbd9 320 PANTHER PTHR30006 2 319 2.7E-137 T 22-04-2016 YE0642 b93ad1c0afaff802e31618563ec9cbd9 320 SUPERFAMILY SSF53850 14 315 3.44E-67 T 22-04-2016 YE0642 b93ad1c0afaff802e31618563ec9cbd9 320 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 1 320 7.6E-166 T 22-04-2016 IPR005967 Proteobacterial thiamine ABC transporter, periplasmic binding protein GO:0005524|GO:0015888|GO:0030288|GO:0048502 YE0642 b93ad1c0afaff802e31618563ec9cbd9 320 Gene3D G3DSA:3.40.190.10 7 113 1.7E-18 T 22-04-2016 YE0642 b93ad1c0afaff802e31618563ec9cbd9 320 Gene3D G3DSA:3.40.190.10 252 310 1.7E-18 T 22-04-2016 YE0642 b93ad1c0afaff802e31618563ec9cbd9 320 PANTHER PTHR30006:SF3 2 319 2.7E-137 T 22-04-2016 YE0642 b93ad1c0afaff802e31618563ec9cbd9 320 Gene3D G3DSA:3.40.190.10 115 251 4.5E-27 T 22-04-2016 YE2832 b52a2b598579b011596a5dc19ba2e1f0 469 SUPERFAMILY SSF55920 198 403 1.7E-15 T 22-04-2016 IPR000994 Peptidase M24, structural domain YE2832 b52a2b598579b011596a5dc19ba2e1f0 469 Pfam PF01321 Creatinase/Prolidase N-terminal domain 34 145 1.6E-5 T 22-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 YE2832 b52a2b598579b011596a5dc19ba2e1f0 469 SUPERFAMILY SSF53092 25 144 2.62E-6 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal YE2832 b52a2b598579b011596a5dc19ba2e1f0 469 Gene3D G3DSA:3.90.230.10 198 403 9.4E-6 T 22-04-2016 IPR000994 Peptidase M24, structural domain YE2832 b52a2b598579b011596a5dc19ba2e1f0 469 Gene3D G3DSA:3.40.350.10 23 146 1.4E-6 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal YE1991 dd02a471e1d603ca886515be648c8724 295 Pfam PF12833 Helix-turn-helix domain 30 107 2.4E-18 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YE1991 dd02a471e1d603ca886515be648c8724 295 SUPERFAMILY SSF55136 127 270 4.45E-14 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain YE1991 dd02a471e1d603ca886515be648c8724 295 SMART SM00342 23 106 6.2E-30 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YE1991 dd02a471e1d603ca886515be648c8724 295 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 90 106 8.3E-8 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YE1991 dd02a471e1d603ca886515be648c8724 295 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 75 90 8.3E-8 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YE1991 dd02a471e1d603ca886515be648c8724 295 SUPERFAMILY SSF46689 9 57 3.48E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE1991 dd02a471e1d603ca886515be648c8724 295 Gene3D G3DSA:3.20.80.10 125 294 8.0E-26 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain YE1991 dd02a471e1d603ca886515be648c8724 295 Gene3D G3DSA:1.10.10.60 9 58 8.7E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE1991 dd02a471e1d603ca886515be648c8724 295 SUPERFAMILY SSF46689 61 108 8.31E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE1991 dd02a471e1d603ca886515be648c8724 295 PANTHER PTHR11019:SF118 1 114 1.6E-71 T 22-04-2016 YE1991 dd02a471e1d603ca886515be648c8724 295 PANTHER PTHR11019 1 114 1.6E-71 T 22-04-2016 YE1991 dd02a471e1d603ca886515be648c8724 295 Pfam PF06445 GyrI-like small molecule binding domain 129 278 6.7E-15 T 22-04-2016 IPR029442 GyrI-like small molecule binding domain YE1991 dd02a471e1d603ca886515be648c8724 295 Gene3D G3DSA:1.10.10.60 61 123 8.4E-24 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE0827 b1485a60643f6caf9b07ce0be164fe93 442 PANTHER PTHR23521:SF2 2 418 9.8E-195 T 22-04-2016 YE0827 b1485a60643f6caf9b07ce0be164fe93 442 SUPERFAMILY SSF103473 7 370 5.75E-41 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE0827 b1485a60643f6caf9b07ce0be164fe93 442 Pfam PF07690 Major Facilitator Superfamily 12 286 2.8E-19 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YE0827 b1485a60643f6caf9b07ce0be164fe93 442 PANTHER PTHR23521 2 418 9.8E-195 T 22-04-2016 YE0827 b1485a60643f6caf9b07ce0be164fe93 442 Gene3D G3DSA:1.20.1250.20 204 377 6.7E-21 T 22-04-2016 YE0827 b1485a60643f6caf9b07ce0be164fe93 442 Gene3D G3DSA:1.20.1250.20 8 181 1.4E-15 T 22-04-2016 YE2839 a1dcdbd6526d01db87b9d2b63d49af2f 186 Pfam PF02469 Fasciclin domain 50 185 1.7E-31 T 22-04-2016 IPR000782 FAS1 domain YE2839 a1dcdbd6526d01db87b9d2b63d49af2f 186 SUPERFAMILY SSF82153 39 185 1.83E-38 T 22-04-2016 IPR000782 FAS1 domain YE2839 a1dcdbd6526d01db87b9d2b63d49af2f 186 SMART SM00554 74 186 8.3E-24 T 22-04-2016 IPR000782 FAS1 domain YE2839 a1dcdbd6526d01db87b9d2b63d49af2f 186 PANTHER PTHR10900 27 185 9.2E-41 T 22-04-2016 YE2839 a1dcdbd6526d01db87b9d2b63d49af2f 186 Gene3D G3DSA:2.30.180.10 39 185 4.3E-37 T 22-04-2016 IPR000782 FAS1 domain YE3431 03575e7ffc9a0ce284f3bbedf94aebbe 374 Gene3D G3DSA:3.75.10.10 18 373 1.2E-142 T 22-04-2016 YE3431 03575e7ffc9a0ce284f3bbedf94aebbe 374 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 27 372 2.6E-120 T 22-04-2016 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 YE3431 03575e7ffc9a0ce284f3bbedf94aebbe 374 Hamap MF_01841 Agmatine deiminase [aguA]. 18 373 59.158 T 22-04-2016 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 YE3431 03575e7ffc9a0ce284f3bbedf94aebbe 374 TIGRFAM TIGR03380 agmatine_aguA: agmatine deiminase 19 373 7.4E-174 T 22-04-2016 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 YE3431 03575e7ffc9a0ce284f3bbedf94aebbe 374 SUPERFAMILY SSF55909 17 373 3.75E-138 T 22-04-2016 YE3431 03575e7ffc9a0ce284f3bbedf94aebbe 374 PANTHER PTHR31377 8 373 3.5E-185 T 22-04-2016 YE3431 03575e7ffc9a0ce284f3bbedf94aebbe 374 PANTHER PTHR31377:SF0 8 373 3.5E-185 T 22-04-2016 YE2962 a983007586af6c76fcf07c3ea301dd86 200 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 1 188 33.253 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 YE2962 a983007586af6c76fcf07c3ea301dd86 200 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 4 187 4.8E-71 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 YE2962 a983007586af6c76fcf07c3ea301dd86 200 PIRSF PIRSF001296 1 192 4.0E-75 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 YE2962 a983007586af6c76fcf07c3ea301dd86 200 Pfam PF02669 K+-transporting ATPase, c chain 5 186 6.4E-69 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 YE2962 a983007586af6c76fcf07c3ea301dd86 200 PANTHER PTHR30042 1 195 4.1E-87 T 22-04-2016 YE2962 a983007586af6c76fcf07c3ea301dd86 200 PANTHER PTHR30042:SF2 1 195 4.1E-87 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 YE2478 587fced77033d75e654bda7447c9b3a3 262 PANTHER PTHR30473 1 262 4.4E-222 T 22-04-2016 YE2478 587fced77033d75e654bda7447c9b3a3 262 PANTHER PTHR30473:SF3 1 262 4.4E-222 T 22-04-2016 YE2478 587fced77033d75e654bda7447c9b3a3 262 Gene3D G3DSA:3.40.50.300 57 261 1.7E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2478 587fced77033d75e654bda7447c9b3a3 262 Pfam PF02562 PhoH-like protein 57 261 2.7E-76 T 22-04-2016 IPR003714 PhoH-like protein GO:0005524 YE2478 587fced77033d75e654bda7447c9b3a3 262 SUPERFAMILY SSF52540 57 239 7.12E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2609 201f1d06d9534ceb2c9a917b1142c1c1 330 PANTHER PTHR32196:SF9 37 299 8.8E-24 T 22-04-2016 YE2609 201f1d06d9534ceb2c9a917b1142c1c1 330 Pfam PF13407 Periplasmic binding protein domain 39 299 1.9E-44 T 22-04-2016 IPR025997 Periplasmic binding protein YE2609 201f1d06d9534ceb2c9a917b1142c1c1 330 SUPERFAMILY SSF53822 36 311 2.51E-47 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YE2609 201f1d06d9534ceb2c9a917b1142c1c1 330 PANTHER PTHR32196 37 299 8.8E-24 T 22-04-2016 YE2609 201f1d06d9534ceb2c9a917b1142c1c1 330 Gene3D G3DSA:3.40.50.2300 147 307 1.7E-30 T 22-04-2016 YE2609 201f1d06d9534ceb2c9a917b1142c1c1 330 Gene3D G3DSA:3.40.50.2300 37 146 3.4E-18 T 22-04-2016 YE0233 69d9dfd0725fb51a6bfac6251a372888 255 PANTHER PTHR24220:SF358 129 255 2.2E-126 T 22-04-2016 YE0233 69d9dfd0725fb51a6bfac6251a372888 255 PANTHER PTHR24220:SF358 8 113 2.2E-126 T 22-04-2016 YE0233 69d9dfd0725fb51a6bfac6251a372888 255 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE0233 69d9dfd0725fb51a6bfac6251a372888 255 Gene3D G3DSA:3.40.50.300 3 252 6.0E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0233 69d9dfd0725fb51a6bfac6251a372888 255 SUPERFAMILY SSF52540 5 253 4.58E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0233 69d9dfd0725fb51a6bfac6251a372888 255 SMART SM00382 31 231 1.9E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain YE0233 69d9dfd0725fb51a6bfac6251a372888 255 Pfam PF00005 ABC transporter 23 182 6.8E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE0233 69d9dfd0725fb51a6bfac6251a372888 255 PANTHER PTHR24220 129 255 2.2E-126 T 22-04-2016 YE0233 69d9dfd0725fb51a6bfac6251a372888 255 PANTHER PTHR24220 8 113 2.2E-126 T 22-04-2016 YE0233 69d9dfd0725fb51a6bfac6251a372888 255 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 234 254 5.9E-9 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal YE4181 47f058259eabfd5554b7bbfd1a763242 338 SUPERFAMILY SSF55021 249 337 1.14E-21 T 22-04-2016 YE4181 47f058259eabfd5554b7bbfd1a763242 338 SUPERFAMILY SSF52540 1 240 1.01E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE4181 47f058259eabfd5554b7bbfd1a763242 338 PANTHER PTHR24220:SF549 3 338 2.7E-134 T 22-04-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 YE4181 47f058259eabfd5554b7bbfd1a763242 338 Gene3D G3DSA:3.40.50.300 1 236 1.1E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE4181 47f058259eabfd5554b7bbfd1a763242 338 Pfam PF09383 NIL domain 266 335 3.2E-18 T 22-04-2016 IPR018449 NIL domain YE4181 47f058259eabfd5554b7bbfd1a763242 338 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE4181 47f058259eabfd5554b7bbfd1a763242 338 Gene3D G3DSA:3.30.70.260 237 337 8.6E-26 T 22-04-2016 YE4181 47f058259eabfd5554b7bbfd1a763242 338 Pfam PF00005 ABC transporter 21 169 6.3E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE4181 47f058259eabfd5554b7bbfd1a763242 338 SMART SM00382 30 218 5.6E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YE4181 47f058259eabfd5554b7bbfd1a763242 338 PANTHER PTHR24220 3 338 2.7E-134 T 22-04-2016 YE4181 47f058259eabfd5554b7bbfd1a763242 338 SMART SM00930 262 337 8.6E-26 T 22-04-2016 IPR018449 NIL domain YE1366 30db81099321868e5662172c594e0ac9 438 Gene3D G3DSA:1.20.1250.20 11 203 2.5E-44 T 22-04-2016 YE1366 30db81099321868e5662172c594e0ac9 438 PANTHER PTHR11662:SF283 1 437 6.4E-220 T 22-04-2016 YE1366 30db81099321868e5662172c594e0ac9 438 Gene3D G3DSA:1.20.1250.20 228 413 2.6E-22 T 22-04-2016 YE1366 30db81099321868e5662172c594e0ac9 438 SUPERFAMILY SSF103473 4 415 5.1E-85 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE1366 30db81099321868e5662172c594e0ac9 438 PANTHER PTHR11662 1 437 6.4E-220 T 22-04-2016 YE1366 30db81099321868e5662172c594e0ac9 438 Pfam PF07690 Major Facilitator Superfamily 17 379 3.5E-55 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YE3997 3b317cf0cb500a1badd57f5d9dbf30fc 82 Pfam PF09012 FeoC like transcriptional regulator 3 77 4.8E-22 T 22-04-2016 IPR015102 Transcriptional regulator HTH-type, FeoC YE3997 3b317cf0cb500a1badd57f5d9dbf30fc 82 SUPERFAMILY SSF46785 2 75 2.85E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3997 3b317cf0cb500a1badd57f5d9dbf30fc 82 Hamap MF_01586 Ferrous iron transport protein C [feoC]. 1 79 29.285 T 22-04-2016 IPR023732 Probable [Fe-S]-dependent transcriptional repressor YE2855 81d070914719cf11aa47ac8f2183f966 727 Pfam PF13307 Helicase C-terminal domain 534 688 9.0E-24 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 YE2855 81d070914719cf11aa47ac8f2183f966 727 Gene3D G3DSA:3.40.50.300 519 671 2.1E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2855 81d070914719cf11aa47ac8f2183f966 727 PANTHER PTHR11472 1 701 0.0 T 22-04-2016 YE2855 81d070914719cf11aa47ac8f2183f966 727 SMART SM00487 23 307 0.0015 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain YE2855 81d070914719cf11aa47ac8f2183f966 727 SUPERFAMILY SSF52540 199 270 3.46E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2855 81d070914719cf11aa47ac8f2183f966 727 SUPERFAMILY SSF52540 47 97 3.46E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2855 81d070914719cf11aa47ac8f2183f966 727 SUPERFAMILY SSF52540 452 670 3.46E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2855 81d070914719cf11aa47ac8f2183f966 727 SMART SM00491 545 677 1.7E-31 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 YE2855 81d070914719cf11aa47ac8f2183f966 727 Gene3D G3DSA:3.40.50.300 211 277 4.2E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2855 81d070914719cf11aa47ac8f2183f966 727 Gene3D G3DSA:3.40.50.300 454 464 4.2E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2855 81d070914719cf11aa47ac8f2183f966 727 Gene3D G3DSA:3.40.50.300 29 122 4.2E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2855 81d070914719cf11aa47ac8f2183f966 727 PANTHER PTHR11472:SF32 1 701 0.0 T 22-04-2016 YE2855 81d070914719cf11aa47ac8f2183f966 727 Pfam PF00270 DEAD/DEAH box helicase 31 94 5.3E-4 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YE2855 81d070914719cf11aa47ac8f2183f966 727 SMART SM00488 18 294 0.0037 T 22-04-2016 IPR006554 Helicase-like, DEXD box c2 type GO:0004003|GO:0016818 YE2855 81d070914719cf11aa47ac8f2183f966 727 Pfam PF06733 DEAD_2 198 263 1.7E-7 T 22-04-2016 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 YE0556 fa0502a0aeaca5054a7a71b0a91f126a 718 Gene3D G3DSA:2.170.130.10 63 176 1.7E-28 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YE0556 fa0502a0aeaca5054a7a71b0a91f126a 718 Pfam PF00593 TonB dependent receptor 464 714 5.5E-33 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YE0556 fa0502a0aeaca5054a7a71b0a91f126a 718 Pfam PF07715 TonB-dependent Receptor Plug Domain 63 175 2.0E-19 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YE0556 fa0502a0aeaca5054a7a71b0a91f126a 718 PANTHER PTHR30442 43 718 7.2E-102 T 22-04-2016 YE0556 fa0502a0aeaca5054a7a71b0a91f126a 718 SUPERFAMILY SSF56935 47 718 1.68E-113 T 22-04-2016 YE0556 fa0502a0aeaca5054a7a71b0a91f126a 718 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 63 718 5.6E-93 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 YE0556 fa0502a0aeaca5054a7a71b0a91f126a 718 Gene3D G3DSA:2.40.170.20 177 718 2.3E-103 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YE0556 fa0502a0aeaca5054a7a71b0a91f126a 718 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 701 718 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site YE0556 fa0502a0aeaca5054a7a71b0a91f126a 718 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 50 - T 22-04-2016 IPR010916 TonB box, conserved site YE3374 53640bd25403fcc1fef3dc6b45477932 505 Pfam PF01336 OB-fold nucleic acid binding domain 68 146 3.1E-15 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 YE3374 53640bd25403fcc1fef3dc6b45477932 505 PANTHER PTHR22594 1 503 3.6E-291 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YE3374 53640bd25403fcc1fef3dc6b45477932 505 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 21 505 45.3 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 YE3374 53640bd25403fcc1fef3dc6b45477932 505 PIRSF PIRSF039101 1 505 1.8E-200 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 YE3374 53640bd25403fcc1fef3dc6b45477932 505 Gene3D G3DSA:3.30.930.10 157 500 3.4E-122 T 22-04-2016 YE3374 53640bd25403fcc1fef3dc6b45477932 505 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 15 504 3.8E-230 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 YE3374 53640bd25403fcc1fef3dc6b45477932 505 SUPERFAMILY SSF55681 162 502 3.25E-124 T 22-04-2016 YE3374 53640bd25403fcc1fef3dc6b45477932 505 Pfam PF00152 tRNA synthetases class II (D, K and N) 162 501 1.7E-83 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 YE3374 53640bd25403fcc1fef3dc6b45477932 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 386 402 1.5E-39 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 YE3374 53640bd25403fcc1fef3dc6b45477932 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 199 209 1.5E-39 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 YE3374 53640bd25403fcc1fef3dc6b45477932 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 244 257 1.5E-39 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 YE3374 53640bd25403fcc1fef3dc6b45477932 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 215 231 1.5E-39 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 YE3374 53640bd25403fcc1fef3dc6b45477932 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 262 279 1.5E-39 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 YE3374 53640bd25403fcc1fef3dc6b45477932 505 SUPERFAMILY SSF50249 13 155 9.3E-48 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE3374 53640bd25403fcc1fef3dc6b45477932 505 Gene3D G3DSA:2.40.50.140 16 154 2.8E-49 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE3374 53640bd25403fcc1fef3dc6b45477932 505 PANTHER PTHR22594:SF4 1 503 3.6E-291 T 22-04-2016 YE1568 c58ea5c1b1e77b765ce0f0edb876dbe1 336 SUPERFAMILY SSF51395 1 334 9.53E-106 T 22-04-2016 YE1568 c58ea5c1b1e77b765ce0f0edb876dbe1 336 Gene3D G3DSA:3.20.20.70 1 335 1.2E-127 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YE1568 c58ea5c1b1e77b765ce0f0edb876dbe1 336 PANTHER PTHR11938 8 332 7.1E-109 T 22-04-2016 YE1568 c58ea5c1b1e77b765ce0f0edb876dbe1 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 336 2.7E-159 T 22-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 YE1568 c58ea5c1b1e77b765ce0f0edb876dbe1 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 YE1568 c58ea5c1b1e77b765ce0f0edb876dbe1 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 YE1568 c58ea5c1b1e77b765ce0f0edb876dbe1 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 335 2.3E-92 T 22-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 YE1568 c58ea5c1b1e77b765ce0f0edb876dbe1 336 PIRSF PIRSF000164 13 336 6.0E-97 T 22-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 YE1568 c58ea5c1b1e77b765ce0f0edb876dbe1 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 51.416 T 22-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 YE2421 0151295711661b5465fb7fa860187388 245 SMART SM00481 4 78 2.3E-15 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 YE2421 0151295711661b5465fb7fa860187388 245 SUPERFAMILY SSF89550 3 241 1.7E-63 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 YE2421 0151295711661b5465fb7fa860187388 245 PANTHER PTHR36928 1 245 1.2E-114 T 22-04-2016 YE2421 0151295711661b5465fb7fa860187388 245 Gene3D G3DSA:3.20.20.140 1 235 2.1E-60 T 22-04-2016 YE2421 0151295711661b5465fb7fa860187388 245 Hamap MF_01561 Probable phosphatase YcdX [ycdX]. 1 243 49.995 T 22-04-2016 IPR023710 Probable phosphatase YcdX GO:0008270 YE2421 0151295711661b5465fb7fa860187388 245 Pfam PF02811 PHP domain 5 158 4.1E-7 T 22-04-2016 IPR004013 PHP domain GO:0003824 YE3530 7396058ab0fb3cde53681c103110c731 349 Pfam PF13437 HlyD family secretion protein 214 329 2.0E-10 T 22-04-2016 YE3530 7396058ab0fb3cde53681c103110c731 349 Gene3D G3DSA:2.40.50.100 211 244 3.5E-16 T 22-04-2016 YE3530 7396058ab0fb3cde53681c103110c731 349 Gene3D G3DSA:2.40.50.100 51 84 3.5E-16 T 22-04-2016 YE3530 7396058ab0fb3cde53681c103110c731 349 SUPERFAMILY SSF111369 124 158 3.4E-9 T 22-04-2016 YE3530 7396058ab0fb3cde53681c103110c731 349 SUPERFAMILY SSF111369 190 263 3.4E-9 T 22-04-2016 YE3530 7396058ab0fb3cde53681c103110c731 349 PANTHER PTHR30367 11 347 2.4E-97 T 22-04-2016 YE3530 7396058ab0fb3cde53681c103110c731 349 PANTHER PTHR30367:SF1 11 347 2.4E-97 T 22-04-2016 IPR030196 Multidrug resistance protein MdtN GO:0006855 YE3530 7396058ab0fb3cde53681c103110c731 349 Pfam PF13533 Biotin-lipoyl like 51 99 6.8E-14 T 22-04-2016 YE3530 7396058ab0fb3cde53681c103110c731 349 SUPERFAMILY SSF111369 50 111 6.15E-10 T 22-04-2016 YE0360 1d5e0b9d9f1703a224ae39fcd72f6252 179 PRINTS PR01171 Bacterial lipocalin signature 103 117 9.0E-43 T 22-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 YE0360 1d5e0b9d9f1703a224ae39fcd72f6252 179 PRINTS PR01171 Bacterial lipocalin signature 50 66 9.0E-43 T 22-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 YE0360 1d5e0b9d9f1703a224ae39fcd72f6252 179 PRINTS PR01171 Bacterial lipocalin signature 33 47 9.0E-43 T 22-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 YE0360 1d5e0b9d9f1703a224ae39fcd72f6252 179 PRINTS PR01171 Bacterial lipocalin signature 120 128 9.0E-43 T 22-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 YE0360 1d5e0b9d9f1703a224ae39fcd72f6252 179 PRINTS PR01171 Bacterial lipocalin signature 162 172 9.0E-43 T 22-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 YE0360 1d5e0b9d9f1703a224ae39fcd72f6252 179 PRINTS PR01171 Bacterial lipocalin signature 135 146 9.0E-43 T 22-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 YE0360 1d5e0b9d9f1703a224ae39fcd72f6252 179 PRINTS PR01171 Bacterial lipocalin signature 69 78 9.0E-43 T 22-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 YE0360 1d5e0b9d9f1703a224ae39fcd72f6252 179 ProSitePatterns PS00213 Lipocalin signature. 32 45 - T 22-04-2016 IPR022272 Lipocalin family conserved site YE0360 1d5e0b9d9f1703a224ae39fcd72f6252 179 PANTHER PTHR10612 24 178 4.4E-47 T 22-04-2016 YE0360 1d5e0b9d9f1703a224ae39fcd72f6252 179 PIRSF PIRSF036893 1 178 6.0E-46 T 22-04-2016 IPR022271 Lipocalin, ApoD type YE0360 1d5e0b9d9f1703a224ae39fcd72f6252 179 SUPERFAMILY SSF50814 10 174 4.36E-50 T 22-04-2016 IPR011038 Calycin-like YE0360 1d5e0b9d9f1703a224ae39fcd72f6252 179 Pfam PF08212 Lipocalin-like domain 34 173 1.9E-45 T 22-04-2016 IPR000566 Lipocalin/cytosolic fatty-acid binding domain YE0360 1d5e0b9d9f1703a224ae39fcd72f6252 179 Gene3D G3DSA:2.40.128.20 8 174 6.3E-57 T 22-04-2016 IPR012674 Calycin YE3274 00427acd22eee91d4cac973d662fcc6c 340 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 100 128 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 YE3274 00427acd22eee91d4cac973d662fcc6c 340 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 225 253 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 YE3274 00427acd22eee91d4cac973d662fcc6c 340 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 130 158 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 YE3274 00427acd22eee91d4cac973d662fcc6c 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 145 179 5.8E-8 T 22-04-2016 IPR001451 Hexapeptide repeat YE3274 00427acd22eee91d4cac973d662fcc6c 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 110 144 1.1E-9 T 22-04-2016 IPR001451 Hexapeptide repeat YE3274 00427acd22eee91d4cac973d662fcc6c 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 222 255 6.6E-7 T 22-04-2016 IPR001451 Hexapeptide repeat YE3274 00427acd22eee91d4cac973d662fcc6c 340 Gene3D G3DSA:2.160.10.10 140 309 1.3E-40 T 22-04-2016 YE3274 00427acd22eee91d4cac973d662fcc6c 340 Gene3D G3DSA:2.160.10.10 99 139 3.3E-13 T 22-04-2016 YE3274 00427acd22eee91d4cac973d662fcc6c 340 PANTHER PTHR22572 61 295 5.1E-68 T 22-04-2016 YE3274 00427acd22eee91d4cac973d662fcc6c 340 SUPERFAMILY SSF51161 33 316 2.36E-87 T 22-04-2016 IPR011004 Trimeric LpxA-like YE3274 00427acd22eee91d4cac973d662fcc6c 340 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 9 326 35.433 T 22-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 YE3274 00427acd22eee91d4cac973d662fcc6c 340 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 22 88 4.8E-24 T 22-04-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 UniPathway: UPA00973 YE3274 00427acd22eee91d4cac973d662fcc6c 340 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 329 9.4E-125 T 22-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 YE3157 b5fe3a3e886d06232f5a5e3df0cbbf7f 165 PIRSF PIRSF006162 4 162 2.3E-61 T 22-04-2016 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 YE3157 b5fe3a3e886d06232f5a5e3df0cbbf7f 165 SUPERFAMILY SSF101307 8 155 1.44E-50 T 22-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 YE3157 b5fe3a3e886d06232f5a5e3df0cbbf7f 165 PANTHER PTHR36305 1 161 7.2E-79 T 22-04-2016 YE3157 b5fe3a3e886d06232f5a5e3df0cbbf7f 165 Gene3D G3DSA:1.10.3760.10 73 151 2.5E-4 T 22-04-2016 IPR027416 YutG-like domain YE3157 b5fe3a3e886d06232f5a5e3df0cbbf7f 165 Pfam PF04608 Phosphatidylglycerophosphatase A 15 154 9.7E-54 T 22-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 YE0954 15538e7bb66a18c5f6067e34d1dca92f 230 SMART SM00988 11 75 5.0E-16 T 22-04-2016 IPR004029 UreE urease accessory, N-terminal YE0954 15538e7bb66a18c5f6067e34d1dca92f 230 Gene3D G3DSA:2.60.260.20 3 79 2.5E-24 T 22-04-2016 YE0954 15538e7bb66a18c5f6067e34d1dca92f 230 PIRSF PIRSF036402 2 230 2.0E-37 T 22-04-2016 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 YE0954 15538e7bb66a18c5f6067e34d1dca92f 230 SUPERFAMILY SSF69287 3 79 1.57E-18 T 22-04-2016 IPR004029 UreE urease accessory, N-terminal YE0954 15538e7bb66a18c5f6067e34d1dca92f 230 Pfam PF05194 UreE urease accessory protein, C-terminal domain 85 219 3.5E-7 T 22-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 YE0954 15538e7bb66a18c5f6067e34d1dca92f 230 Pfam PF02814 UreE urease accessory protein, N-terminal domain 15 73 3.2E-16 T 22-04-2016 IPR004029 UreE urease accessory, N-terminal YE0954 15538e7bb66a18c5f6067e34d1dca92f 230 Hamap MF_00822 Urease accessory protein UreE [ureE]. 2 159 14.71 T 22-04-2016 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 YE1119 f429f430655b4b60ebb11ba338b36cb5 496 Pfam PF02541 Ppx/GppA phosphatase family 2 284 2.1E-98 T 22-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 YE1119 f429f430655b4b60ebb11ba338b36cb5 496 SUPERFAMILY SSF109604 289 481 3.08E-54 T 22-04-2016 YE1119 f429f430655b4b60ebb11ba338b36cb5 496 Gene3D G3DSA:3.30.420.40 1 107 8.5E-33 T 22-04-2016 YE1119 f429f430655b4b60ebb11ba338b36cb5 496 PIRSF PIRSF001267 1 482 2.7E-189 T 22-04-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40|UniPathway: UPA00908 YE1119 f429f430655b4b60ebb11ba338b36cb5 496 Gene3D G3DSA:3.30.420.150 108 287 1.7E-53 T 22-04-2016 YE1119 f429f430655b4b60ebb11ba338b36cb5 496 PANTHER PTHR30005:SF4 1 493 2.8E-249 T 22-04-2016 YE1119 f429f430655b4b60ebb11ba338b36cb5 496 SUPERFAMILY SSF53067 1 109 2.65E-27 T 22-04-2016 YE1119 f429f430655b4b60ebb11ba338b36cb5 496 PANTHER PTHR30005 1 493 2.8E-249 T 22-04-2016 YE1119 f429f430655b4b60ebb11ba338b36cb5 496 SUPERFAMILY SSF53067 113 286 2.98E-48 T 22-04-2016 YE2526 a1c613b95e20e6e6319b5b600b08ea3d 120 Gene3D G3DSA:1.20.58.380 5 93 2.4E-26 T 22-04-2016 YE2526 a1c613b95e20e6e6319b5b600b08ea3d 120 Hamap MF_01180 Flagellar protein FliT [fliT]. 1 120 26.071 T 22-04-2016 IPR008622 Flagellar protein FliT YE2526 a1c613b95e20e6e6319b5b600b08ea3d 120 Pfam PF05400 Flagellar protein FliT 21 106 4.4E-21 T 22-04-2016 IPR008622 Flagellar protein FliT YE1002 71dd7469f9488f705a3d847de8ef1961 228 PANTHER PTHR11264 4 228 4.5E-175 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 YE1002 71dd7469f9488f705a3d847de8ef1961 228 Gene3D G3DSA:3.40.470.10 6 221 6.0E-104 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like YE1002 71dd7469f9488f705a3d847de8ef1961 228 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 221 40.617 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 YE1002 71dd7469f9488f705a3d847de8ef1961 228 SMART SM00987 49 210 3.3E-42 T 22-04-2016 YE1002 71dd7469f9488f705a3d847de8ef1961 228 SUPERFAMILY SSF52141 6 221 4.14E-97 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like YE1002 71dd7469f9488f705a3d847de8ef1961 228 PANTHER PTHR11264:SF10 4 228 4.5E-175 T 22-04-2016 YE1002 71dd7469f9488f705a3d847de8ef1961 228 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 6 214 2.4E-89 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 YE1002 71dd7469f9488f705a3d847de8ef1961 228 Pfam PF03167 Uracil DNA glycosylase superfamily 55 209 1.6E-24 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like YE1002 71dd7469f9488f705a3d847de8ef1961 228 SMART SM00986 49 210 3.3E-42 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like YE1002 71dd7469f9488f705a3d847de8ef1961 228 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 22-04-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 YE0363 3c143460919d5ff57cb03dde22588efc 244 Gene3D G3DSA:3.10.20.30 3 106 1.9E-34 T 22-04-2016 IPR012675 Beta-grasp domain YE0363 3c143460919d5ff57cb03dde22588efc 244 SUPERFAMILY SSF54292 4 106 1.62E-29 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YE0363 3c143460919d5ff57cb03dde22588efc 244 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 YE0363 3c143460919d5ff57cb03dde22588efc 244 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 8 111 4.0E-33 T 22-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 YE0363 3c143460919d5ff57cb03dde22588efc 244 PANTHER PTHR11921 3 239 3.7E-103 T 22-04-2016 YE0363 3c143460919d5ff57cb03dde22588efc 244 Pfam PF13183 4Fe-4S dicluster domain 146 219 8.8E-12 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YE0363 3c143460919d5ff57cb03dde22588efc 244 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YE0363 3c143460919d5ff57cb03dde22588efc 244 SUPERFAMILY SSF46548 107 229 2.09E-31 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 YE0363 3c143460919d5ff57cb03dde22588efc 244 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 229 6.7E-98 T 22-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 YE0363 3c143460919d5ff57cb03dde22588efc 244 Gene3D G3DSA:1.10.1060.10 107 232 5.0E-37 T 22-04-2016 YE0472 cdbf3a8385ae253e626ed7245717079c 224 Gene3D G3DSA:3.40.50.300 11 211 6.2E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0472 cdbf3a8385ae253e626ed7245717079c 224 PANTHER PTHR24220:SF380 9 211 2.1E-128 T 22-04-2016 YE0472 cdbf3a8385ae253e626ed7245717079c 224 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE0472 cdbf3a8385ae253e626ed7245717079c 224 Pfam PF00005 ABC transporter 13 167 2.2E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE0472 cdbf3a8385ae253e626ed7245717079c 224 TIGRFAM TIGR02324 CP_lyasePhnL: phosphonate C-P lyase system protein PhnL 2 212 7.2E-104 T 22-04-2016 IPR012701 Phosphonate C-P lyase system, PhnL KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399 YE0472 cdbf3a8385ae253e626ed7245717079c 224 SMART SM00382 22 215 9.0E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain YE0472 cdbf3a8385ae253e626ed7245717079c 224 PANTHER PTHR24220 9 211 2.1E-128 T 22-04-2016 YE0472 cdbf3a8385ae253e626ed7245717079c 224 SUPERFAMILY SSF52540 4 212 5.04E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3958 173e39536e88bb362906bbee4afd2cc6 191 PANTHER PTHR11922 1 190 1.0E-95 T 22-04-2016 YE3958 173e39536e88bb362906bbee4afd2cc6 191 Gene3D G3DSA:3.40.50.880 2 190 3.7E-67 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YE3958 173e39536e88bb362906bbee4afd2cc6 191 Pfam PF00117 Glutamine amidotransferase class-I 3 189 1.0E-54 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 YE3958 173e39536e88bb362906bbee4afd2cc6 191 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 190 3.6E-94 T 22-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 YE3958 173e39536e88bb362906bbee4afd2cc6 191 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 9.2E-6 T 22-04-2016 YE3958 173e39536e88bb362906bbee4afd2cc6 191 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 9.2E-6 T 22-04-2016 YE3958 173e39536e88bb362906bbee4afd2cc6 191 PRINTS PR00097 Anthranilate synthase component II signature 168 181 1.5E-36 T 22-04-2016 YE3958 173e39536e88bb362906bbee4afd2cc6 191 PRINTS PR00097 Anthranilate synthase component II signature 2 16 1.5E-36 T 22-04-2016 YE3958 173e39536e88bb362906bbee4afd2cc6 191 PRINTS PR00097 Anthranilate synthase component II signature 119 131 1.5E-36 T 22-04-2016 YE3958 173e39536e88bb362906bbee4afd2cc6 191 PRINTS PR00097 Anthranilate synthase component II signature 74 85 1.5E-36 T 22-04-2016 YE3958 173e39536e88bb362906bbee4afd2cc6 191 PRINTS PR00097 Anthranilate synthase component II signature 99 107 1.5E-36 T 22-04-2016 YE3958 173e39536e88bb362906bbee4afd2cc6 191 PRINTS PR00097 Anthranilate synthase component II signature 47 56 1.5E-36 T 22-04-2016 YE3958 173e39536e88bb362906bbee4afd2cc6 191 SUPERFAMILY SSF52317 1 190 1.16E-54 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YE3958 173e39536e88bb362906bbee4afd2cc6 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 7.5E-14 T 22-04-2016 YE3958 173e39536e88bb362906bbee4afd2cc6 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 168 181 7.5E-14 T 22-04-2016 YE3958 173e39536e88bb362906bbee4afd2cc6 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 7.5E-14 T 22-04-2016 YE3958 173e39536e88bb362906bbee4afd2cc6 191 PANTHER PTHR11922:SF7 1 190 1.0E-95 T 22-04-2016 YE1264 47adf2dad1242f68235c14503f01b0ab 219 Pfam PF03379 CcmB protein 3 216 5.4E-93 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 YE1264 47adf2dad1242f68235c14503f01b0ab 219 PANTHER PTHR30070:SF1 1 219 1.3E-75 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 YE1264 47adf2dad1242f68235c14503f01b0ab 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 52 69 1.4E-72 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 YE1264 47adf2dad1242f68235c14503f01b0ab 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 155 174 1.4E-72 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 YE1264 47adf2dad1242f68235c14503f01b0ab 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 100 118 1.4E-72 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 YE1264 47adf2dad1242f68235c14503f01b0ab 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 26 47 1.4E-72 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 YE1264 47adf2dad1242f68235c14503f01b0ab 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 75 98 1.4E-72 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 YE1264 47adf2dad1242f68235c14503f01b0ab 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 192 215 1.4E-72 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 YE1264 47adf2dad1242f68235c14503f01b0ab 219 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 5 215 6.7E-97 T 22-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria YE1264 47adf2dad1242f68235c14503f01b0ab 219 PANTHER PTHR30070 1 219 1.3E-75 T 22-04-2016 YE1264 47adf2dad1242f68235c14503f01b0ab 219 PIRSF PIRSF002764 1 219 1.1E-86 T 22-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria YE0605 e6f845bede1190903d1de6e27d4a2876 195 Gene3D G3DSA:3.40.980.10 3 188 2.4E-53 T 22-04-2016 IPR001453 MoaB/Mog domain YE0605 e6f845bede1190903d1de6e27d4a2876 195 SMART SM00852 7 153 4.3E-22 T 22-04-2016 IPR001453 MoaB/Mog domain YE0605 e6f845bede1190903d1de6e27d4a2876 195 SUPERFAMILY SSF53218 3 188 5.1E-48 T 22-04-2016 IPR001453 MoaB/Mog domain YE0605 e6f845bede1190903d1de6e27d4a2876 195 PANTHER PTHR10192 1 188 2.0E-90 T 22-04-2016 YE0605 e6f845bede1190903d1de6e27d4a2876 195 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 4 146 1.4E-39 T 22-04-2016 IPR001453 MoaB/Mog domain YE0605 e6f845bede1190903d1de6e27d4a2876 195 Pfam PF00994 Probable molybdopterin binding domain 8 147 2.4E-28 T 22-04-2016 IPR001453 MoaB/Mog domain YE0605 e6f845bede1190903d1de6e27d4a2876 195 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 69 82 - T 22-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 YE2279 2f0cea607ef586c0f972ee4625948362 396 PANTHER PTHR23502 4 379 5.1E-122 T 22-04-2016 YE2279 2f0cea607ef586c0f972ee4625948362 396 PRINTS PR01035 Tetracycline resistance protein signature 129 151 2.9E-6 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 YE2279 2f0cea607ef586c0f972ee4625948362 396 PRINTS PR01035 Tetracycline resistance protein signature 14 30 2.9E-6 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 YE2279 2f0cea607ef586c0f972ee4625948362 396 PRINTS PR01035 Tetracycline resistance protein signature 301 321 2.9E-6 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 YE2279 2f0cea607ef586c0f972ee4625948362 396 Pfam PF07690 Major Facilitator Superfamily 10 350 1.7E-45 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YE2279 2f0cea607ef586c0f972ee4625948362 396 Gene3D G3DSA:1.20.1250.20 202 387 5.5E-11 T 22-04-2016 YE2279 2f0cea607ef586c0f972ee4625948362 396 Gene3D G3DSA:1.20.1250.20 5 185 7.9E-31 T 22-04-2016 YE2279 2f0cea607ef586c0f972ee4625948362 396 ProSitePatterns PS00216 Sugar transport proteins signature 1. 58 74 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 YE2279 2f0cea607ef586c0f972ee4625948362 396 SUPERFAMILY SSF103473 4 384 2.22E-59 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE2279 2f0cea607ef586c0f972ee4625948362 396 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 3 372 1.2E-73 T 22-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 YE2279 2f0cea607ef586c0f972ee4625948362 396 PANTHER PTHR23502:SF19 4 379 5.1E-122 T 22-04-2016 YE2583 404cb7c0d2d6c45601ee58ae6e2df356 139 Pfam PF00582 Universal stress protein family 2 138 2.0E-16 T 22-04-2016 IPR006016 UspA GO:0006950 YE2583 404cb7c0d2d6c45601ee58ae6e2df356 139 SUPERFAMILY SSF52402 3 138 1.17E-23 T 22-04-2016 YE2583 404cb7c0d2d6c45601ee58ae6e2df356 139 PIRSF PIRSF006276 1 139 2.7E-40 T 22-04-2016 IPR006015 Universal stress protein A YE2583 404cb7c0d2d6c45601ee58ae6e2df356 139 Gene3D G3DSA:3.40.50.620 3 138 1.4E-21 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YE1661 377c0b1a6678917cd2479d6f94fed4e9 204 PANTHER PTHR34413 8 203 5.1E-22 T 22-04-2016 YE1661 377c0b1a6678917cd2479d6f94fed4e9 204 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 86 204 2.1E-22 T 22-04-2016 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly YE3016 8691b96fedb29bd39117b4dfc2d0d32b 214 Gene3D G3DSA:3.60.21.10 3 213 8.2E-45 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like YE3016 8691b96fedb29bd39117b4dfc2d0d32b 214 Pfam PF00149 Calcineurin-like phosphoesterase 12 187 1.2E-13 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 YE3016 8691b96fedb29bd39117b4dfc2d0d32b 214 PANTHER PTHR24032:SF33 1 213 2.1E-56 T 22-04-2016 YE3016 8691b96fedb29bd39117b4dfc2d0d32b 214 PANTHER PTHR24032 1 213 2.1E-56 T 22-04-2016 YE3016 8691b96fedb29bd39117b4dfc2d0d32b 214 ProSitePatterns PS00125 Serine/threonine specific protein phosphatases signature. 70 75 - T 22-04-2016 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04660+3.1.3.16 YE3016 8691b96fedb29bd39117b4dfc2d0d32b 214 SUPERFAMILY SSF56300 2 213 1.15E-47 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like YE1879 1f0bc77d716f5abc9e41576fbe324693 465 SUPERFAMILY SSF118215 31 444 1.7E-97 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YE1879 1f0bc77d716f5abc9e41576fbe324693 465 PANTHER PTHR11958:SF5 3 459 1.6E-272 T 22-04-2016 YE1879 1f0bc77d716f5abc9e41576fbe324693 465 PANTHER PTHR11958 3 459 1.6E-272 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YE1879 1f0bc77d716f5abc9e41576fbe324693 465 PRINTS PR00173 Glutamate-aspartate symporter signature 399 419 1.9E-23 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YE1879 1f0bc77d716f5abc9e41576fbe324693 465 PRINTS PR00173 Glutamate-aspartate symporter signature 107 132 1.9E-23 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YE1879 1f0bc77d716f5abc9e41576fbe324693 465 PRINTS PR00173 Glutamate-aspartate symporter signature 184 206 1.9E-23 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YE1879 1f0bc77d716f5abc9e41576fbe324693 465 PRINTS PR00173 Glutamate-aspartate symporter signature 77 97 1.9E-23 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YE1879 1f0bc77d716f5abc9e41576fbe324693 465 PRINTS PR00173 Glutamate-aspartate symporter signature 372 391 1.9E-23 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YE1879 1f0bc77d716f5abc9e41576fbe324693 465 Pfam PF00375 Sodium:dicarboxylate symporter family 31 444 3.7E-103 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YE1879 1f0bc77d716f5abc9e41576fbe324693 465 Gene3D G3DSA:1.10.3860.10 25 451 3.1E-103 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YEP0003 f943484d1b9762193a8b2720d20528e0 144 Gene3D G3DSA:3.30.930.10 1 144 5.1E-64 T 22-04-2016 YEP0003 f943484d1b9762193a8b2720d20528e0 144 PANTHER PTHR30073 1 144 1.6E-83 T 22-04-2016 YEP0003 f943484d1b9762193a8b2720d20528e0 144 PANTHER PTHR30073:SF5 1 144 1.6E-83 T 22-04-2016 YEP0003 f943484d1b9762193a8b2720d20528e0 144 Pfam PF03590 Aspartate-ammonia ligase 1 144 1.7E-60 T 22-04-2016 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1|UniPathway: UPA00134 YEP0003 f943484d1b9762193a8b2720d20528e0 144 SUPERFAMILY SSF55681 1 144 3.29E-37 T 22-04-2016 YE3023 376fa89327e9c0fd72fbb4d0e8af689d 318 PANTHER PTHR17630 4 159 4.5E-91 T 22-04-2016 YE3023 376fa89327e9c0fd72fbb4d0e8af689d 318 PANTHER PTHR17630:SF49 179 318 4.5E-91 T 22-04-2016 YE3023 376fa89327e9c0fd72fbb4d0e8af689d 318 SUPERFAMILY SSF53474 206 317 4.83E-44 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE3023 376fa89327e9c0fd72fbb4d0e8af689d 318 SUPERFAMILY SSF53474 14 160 4.83E-44 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE3023 376fa89327e9c0fd72fbb4d0e8af689d 318 PANTHER PTHR17630:SF49 4 159 4.5E-91 T 22-04-2016 YE3023 376fa89327e9c0fd72fbb4d0e8af689d 318 PANTHER PTHR17630 179 318 4.5E-91 T 22-04-2016 YE3023 376fa89327e9c0fd72fbb4d0e8af689d 318 Pfam PF01738 Dienelactone hydrolase family 30 148 5.8E-9 T 22-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 YE3023 376fa89327e9c0fd72fbb4d0e8af689d 318 Gene3D G3DSA:3.40.50.1820 20 317 1.9E-61 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE0267 4f5a6eabf896e7b532885170a372f571 387 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 1 387 60.281 T 22-04-2016 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 YE0267 4f5a6eabf896e7b532885170a372f571 387 ProSitePatterns PS00737 Thiolases signature 2. 333 349 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 YE0267 4f5a6eabf896e7b532885170a372f571 387 Pfam PF02803 Thiolase, C-terminal domain 262 386 2.7E-49 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 YE0267 4f5a6eabf896e7b532885170a372f571 387 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 385 2.5E-141 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 YE0267 4f5a6eabf896e7b532885170a372f571 387 ProSitePatterns PS00099 Thiolases active site. 368 381 - T 22-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 YE0267 4f5a6eabf896e7b532885170a372f571 387 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 3 387 1.2E-225 T 22-04-2016 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 YE0267 4f5a6eabf896e7b532885170a372f571 387 Pfam PF00108 Thiolase, N-terminal domain 4 254 1.2E-81 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 YE0267 4f5a6eabf896e7b532885170a372f571 387 SUPERFAMILY SSF53901 262 386 1.34E-44 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YE0267 4f5a6eabf896e7b532885170a372f571 387 SUPERFAMILY SSF53901 1 258 1.96E-77 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YE0267 4f5a6eabf896e7b532885170a372f571 387 Gene3D G3DSA:3.40.47.10 268 386 5.5E-61 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YE0267 4f5a6eabf896e7b532885170a372f571 387 Gene3D G3DSA:3.40.47.10 141 183 5.5E-61 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YE0267 4f5a6eabf896e7b532885170a372f571 387 PANTHER PTHR18919:SF69 1 387 3.1E-203 T 22-04-2016 YE0267 4f5a6eabf896e7b532885170a372f571 387 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 22-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 YE0267 4f5a6eabf896e7b532885170a372f571 387 PIRSF PIRSF000429 1 387 1.8E-130 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 YE0267 4f5a6eabf896e7b532885170a372f571 387 Gene3D G3DSA:3.40.47.10 184 267 8.4E-64 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YE0267 4f5a6eabf896e7b532885170a372f571 387 Gene3D G3DSA:3.40.47.10 4 126 8.4E-64 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YE0267 4f5a6eabf896e7b532885170a372f571 387 PANTHER PTHR18919 1 387 3.1E-203 T 22-04-2016 YE4101 f3861f3b53a39a40229576aa9771d864 444 SUPERFAMILY SSF56935 29 444 4.07E-94 T 22-04-2016 YE4101 f3861f3b53a39a40229576aa9771d864 444 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 36 439 7.0E-29 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 YE4101 f3861f3b53a39a40229576aa9771d864 444 Pfam PF02264 LamB porin 32 444 5.8E-90 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 YE4101 f3861f3b53a39a40229576aa9771d864 444 PANTHER PTHR38762 7 444 2.6E-36 T 22-04-2016 YE4101 f3861f3b53a39a40229576aa9771d864 444 Gene3D G3DSA:2.40.170.10 28 444 6.9E-103 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 YE0400 b0e675248bda229709c28530ea0d4eb6 247 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 22-04-2016 IPR020583 Inositol monophosphatase, metal-binding site YE0400 b0e675248bda229709c28530ea0d4eb6 247 Gene3D G3DSA:3.30.540.10 2 150 2.3E-43 T 22-04-2016 YE0400 b0e675248bda229709c28530ea0d4eb6 247 SUPERFAMILY SSF56655 2 243 3.4E-73 T 22-04-2016 YE0400 b0e675248bda229709c28530ea0d4eb6 247 Pfam PF00459 Inositol monophosphatase family 3 233 8.6E-48 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 YE0400 b0e675248bda229709c28530ea0d4eb6 247 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 2 245 1.1E-103 T 22-04-2016 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial GO:0000287|GO:0016020 KEGG: 00920+3.1.3.7 YE0400 b0e675248bda229709c28530ea0d4eb6 247 Gene3D G3DSA:3.40.190.80 151 244 7.5E-40 T 22-04-2016 YE0400 b0e675248bda229709c28530ea0d4eb6 247 PANTHER PTHR20854:SF5 2 244 8.9E-83 T 22-04-2016 YE0400 b0e675248bda229709c28530ea0d4eb6 247 PANTHER PTHR20854 2 244 8.9E-83 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 YE0400 b0e675248bda229709c28530ea0d4eb6 247 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 205 219 - T 22-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 YE3433 fdf63ce72898ca413cb9ba5b686ab708 231 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 80 94 - T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 YE3433 fdf63ce72898ca413cb9ba5b686ab708 231 PANTHER PTHR10146 1 230 2.2E-101 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 YE3433 fdf63ce72898ca413cb9ba5b686ab708 231 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 230 2.6E-91 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 YE3433 fdf63ce72898ca413cb9ba5b686ab708 231 PIRSF PIRSF004848 1 231 1.1E-73 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 YE3433 fdf63ce72898ca413cb9ba5b686ab708 231 Pfam PF01168 Alanine racemase, N-terminal domain 7 230 2.5E-27 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YE3433 fdf63ce72898ca413cb9ba5b686ab708 231 SUPERFAMILY SSF51419 4 228 6.8E-80 T 22-04-2016 IPR029066 PLP-binding barrel YE3433 fdf63ce72898ca413cb9ba5b686ab708 231 Gene3D G3DSA:3.20.20.10 3 230 2.4E-91 T 22-04-2016 IPR029066 PLP-binding barrel YE3234 2f486137a79dfeb629277a353f91320b 386 Gene3D G3DSA:3.90.1150.10 273 383 1.1E-21 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YE3234 2f486137a79dfeb629277a353f91320b 386 PANTHER PTHR11751 11 386 3.0E-150 T 22-04-2016 YE3234 2f486137a79dfeb629277a353f91320b 386 PANTHER PTHR11751:SF301 11 386 3.0E-150 T 22-04-2016 YE3234 2f486137a79dfeb629277a353f91320b 386 SUPERFAMILY SSF53383 9 385 6.25E-100 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YE3234 2f486137a79dfeb629277a353f91320b 386 Gene3D G3DSA:3.40.640.10 45 272 2.9E-71 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YE3234 2f486137a79dfeb629277a353f91320b 386 Pfam PF00155 Aminotransferase class I and II 32 383 4.0E-62 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YE2280 e1b944b5e3ca66d53d7b56081d56f141 355 PRINTS PR00992 Alanine racemase signature 121 133 2.6E-70 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YE2280 e1b944b5e3ca66d53d7b56081d56f141 355 PRINTS PR00992 Alanine racemase signature 27 43 2.6E-70 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YE2280 e1b944b5e3ca66d53d7b56081d56f141 355 PRINTS PR00992 Alanine racemase signature 338 351 2.6E-70 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YE2280 e1b944b5e3ca66d53d7b56081d56f141 355 PRINTS PR00992 Alanine racemase signature 155 166 2.6E-70 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YE2280 e1b944b5e3ca66d53d7b56081d56f141 355 PRINTS PR00992 Alanine racemase signature 248 263 2.6E-70 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YE2280 e1b944b5e3ca66d53d7b56081d56f141 355 PRINTS PR00992 Alanine racemase signature 265 280 2.6E-70 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YE2280 e1b944b5e3ca66d53d7b56081d56f141 355 PRINTS PR00992 Alanine racemase signature 190 217 2.6E-70 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YE2280 e1b944b5e3ca66d53d7b56081d56f141 355 PRINTS PR00992 Alanine racemase signature 61 79 2.6E-70 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YE2280 e1b944b5e3ca66d53d7b56081d56f141 355 PRINTS PR00992 Alanine racemase signature 286 303 2.6E-70 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YE2280 e1b944b5e3ca66d53d7b56081d56f141 355 Hamap MF_01201 Alanine racemase. 2 355 31.605 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YE2280 e1b944b5e3ca66d53d7b56081d56f141 355 SMART SM01005 232 354 5.5E-54 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YE2280 e1b944b5e3ca66d53d7b56081d56f141 355 Gene3D G3DSA:3.20.20.10 11 207 7.5E-64 T 22-04-2016 IPR029066 PLP-binding barrel YE2280 e1b944b5e3ca66d53d7b56081d56f141 355 TIGRFAM TIGR00492 alr: alanine racemase 5 352 3.3E-117 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YE2280 e1b944b5e3ca66d53d7b56081d56f141 355 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 32 42 - T 22-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YE2280 e1b944b5e3ca66d53d7b56081d56f141 355 SUPERFAMILY SSF50621 227 352 1.53E-41 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 YE2280 e1b944b5e3ca66d53d7b56081d56f141 355 Gene3D G3DSA:2.40.37.10 208 352 1.3E-50 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 YE2280 e1b944b5e3ca66d53d7b56081d56f141 355 SUPERFAMILY SSF51419 10 233 2.8E-63 T 22-04-2016 IPR029066 PLP-binding barrel YE2280 e1b944b5e3ca66d53d7b56081d56f141 355 Pfam PF01168 Alanine racemase, N-terminal domain 10 217 7.4E-65 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YE2280 e1b944b5e3ca66d53d7b56081d56f141 355 PANTHER PTHR30511 1 351 2.1E-127 T 22-04-2016 YE2280 e1b944b5e3ca66d53d7b56081d56f141 355 PANTHER PTHR30511:SF0 1 351 2.1E-127 T 22-04-2016 YE2280 e1b944b5e3ca66d53d7b56081d56f141 355 Pfam PF00842 Alanine racemase, C-terminal domain 232 352 5.6E-34 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YE2830 3548d8260efbc8353abc3355e99b60ad 808 Pfam PF13402 Peptidase M60, enhancin and enhancin-like 77 426 3.7E-70 T 22-04-2016 IPR031161 Peptidase family M60 domain YE2830 3548d8260efbc8353abc3355e99b60ad 808 Gene3D G3DSA:2.10.10.20 666 726 5.0E-5 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 YE2830 3548d8260efbc8353abc3355e99b60ad 808 PANTHER PTHR15730 143 485 2.0E-39 T 22-04-2016 YE2830 3548d8260efbc8353abc3355e99b60ad 808 SMART SM01276 78 376 5.2E-97 T 22-04-2016 IPR031161 Peptidase family M60 domain YE2830 3548d8260efbc8353abc3355e99b60ad 808 SUPERFAMILY SSF51055 665 721 3.53E-5 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 YE0491 aa9235004f036d2580cb168513f94b66 522 SUPERFAMILY SSF53850 21 517 3.98E-99 T 22-04-2016 YE0491 aa9235004f036d2580cb168513f94b66 522 PANTHER PTHR30290 3 518 1.8E-87 T 22-04-2016 YE0491 aa9235004f036d2580cb168513f94b66 522 Gene3D G3DSA:3.10.105.10 296 490 7.9E-36 T 22-04-2016 YE0491 aa9235004f036d2580cb168513f94b66 522 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 70 439 7.7E-66 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain YE0491 aa9235004f036d2580cb168513f94b66 522 Gene3D G3DSA:3.40.190.10 141 295 4.5E-31 T 22-04-2016 YE0491 aa9235004f036d2580cb168513f94b66 522 PIRSF PIRSF002741 5 519 1.9E-62 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 YE1790 1dc9679faa91db902878f56777339ecf 220 SUPERFAMILY SSF53098 1 196 2.34E-31 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE1790 1dc9679faa91db902878f56777339ecf 220 SMART SM00479 2 157 8.1E-28 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III YE1790 1dc9679faa91db902878f56777339ecf 220 PANTHER PTHR30231 5 211 2.4E-31 T 22-04-2016 YE1790 1dc9679faa91db902878f56777339ecf 220 Gene3D G3DSA:3.30.420.10 3 154 7.6E-33 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE1790 1dc9679faa91db902878f56777339ecf 220 Pfam PF00929 Exonuclease 5 148 4.2E-11 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III YE3860 8b00cd46ba1efc7cbf0eeb33e474a925 973 SUPERFAMILY SSF56112 812 948 5.93E-12 T 22-04-2016 IPR011009 Protein kinase-like domain YE3674 45eb5b5387132810f5f131d142ae79a8 950 SUPERFAMILY SSF81301 17 286 8.99E-92 T 22-04-2016 YE3674 45eb5b5387132810f5f131d142ae79a8 950 SUPERFAMILY SSF81593 818 943 2.75E-33 T 22-04-2016 YE3674 45eb5b5387132810f5f131d142ae79a8 950 Gene3D G3DSA:3.30.460.10 639 813 3.4E-62 T 22-04-2016 YE3674 45eb5b5387132810f5f131d142ae79a8 950 Gene3D G3DSA:3.30.460.10 113 285 1.1E-62 T 22-04-2016 YE3674 45eb5b5387132810f5f131d142ae79a8 950 Pfam PF08335 GlnD PII-uridylyltransferase 825 920 1.8E-10 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 YE3674 45eb5b5387132810f5f131d142ae79a8 950 Pfam PF08335 GlnD PII-uridylyltransferase 297 436 1.1E-46 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 YE3674 45eb5b5387132810f5f131d142ae79a8 950 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 553 805 1.8E-98 T 22-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 YE3674 45eb5b5387132810f5f131d142ae79a8 950 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 34 276 5.6E-96 T 22-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 YE3674 45eb5b5387132810f5f131d142ae79a8 950 PANTHER PTHR30621 1 942 0.0 T 22-04-2016 YE3674 45eb5b5387132810f5f131d142ae79a8 950 Hamap MF_00802 Glutamate-ammonia-ligase adenylyltransferase [glnE]. 27 945 19.657 T 22-04-2016 IPR023057 Glutamate-ammonia-ligase adenylyltransferase GO:0008882 YE3674 45eb5b5387132810f5f131d142ae79a8 950 SUPERFAMILY SSF81593 287 436 1.8E-43 T 22-04-2016 YE3674 45eb5b5387132810f5f131d142ae79a8 950 SUPERFAMILY SSF81301 525 814 3.27E-88 T 22-04-2016 YE1589 888ee9964db055b3c3d1d5a3035b063c 138 SUPERFAMILY SSF51735 2 135 8.95E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain YE1589 888ee9964db055b3c3d1d5a3035b063c 138 Gene3D G3DSA:3.40.50.720 2 135 5.6E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain YE1589 888ee9964db055b3c3d1d5a3035b063c 138 Pfam PF13380 CoA binding domain 14 130 1.1E-38 T 22-04-2016 IPR003781 CoA-binding GO:0048037 YE1589 888ee9964db055b3c3d1d5a3035b063c 138 SMART SM00881 10 104 8.7E-26 T 22-04-2016 IPR003781 CoA-binding GO:0048037 YE1589 888ee9964db055b3c3d1d5a3035b063c 138 PANTHER PTHR33303 1 133 2.0E-57 T 22-04-2016 YE0210 bc808f689663f5d88bd9c64078b7e64c 454 Pfam PF07690 Major Facilitator Superfamily 34 400 1.3E-44 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YE0210 bc808f689663f5d88bd9c64078b7e64c 454 PANTHER PTHR11662:SF141 1 448 2.6E-242 T 22-04-2016 YE0210 bc808f689663f5d88bd9c64078b7e64c 454 PANTHER PTHR11662 1 448 2.6E-242 T 22-04-2016 YE0210 bc808f689663f5d88bd9c64078b7e64c 454 Gene3D G3DSA:1.20.1250.20 246 446 1.2E-46 T 22-04-2016 YE0210 bc808f689663f5d88bd9c64078b7e64c 454 SUPERFAMILY SSF103473 13 442 1.28E-83 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE0210 bc808f689663f5d88bd9c64078b7e64c 454 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 22-04-2016 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 YE0210 bc808f689663f5d88bd9c64078b7e64c 454 PIRSF PIRSF002808 5 451 9.2E-172 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 YE0210 bc808f689663f5d88bd9c64078b7e64c 454 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 417 5.2E-165 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 YE0210 bc808f689663f5d88bd9c64078b7e64c 454 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 440 7.3E-262 T 22-04-2016 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 YE0210 bc808f689663f5d88bd9c64078b7e64c 454 Gene3D G3DSA:1.20.1250.20 21 224 8.1E-54 T 22-04-2016 YE2972 22aad295252b4d198d44818885b7da45 175 Pfam PF00258 Flavodoxin 6 160 1.9E-32 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 YE2972 22aad295252b4d198d44818885b7da45 175 TIGRFAM TIGR01752 flav_long: flavodoxin 4 168 2.0E-76 T 22-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 YE2972 22aad295252b4d198d44818885b7da45 175 SUPERFAMILY SSF52218 4 171 7.69E-54 T 22-04-2016 IPR029039 Flavoprotein-like domain YE2972 22aad295252b4d198d44818885b7da45 175 PIRSF PIRSF038996 1 172 4.7E-70 T 22-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 YE2972 22aad295252b4d198d44818885b7da45 175 PANTHER PTHR19384 141 173 4.8E-112 T 22-04-2016 YE2972 22aad295252b4d198d44818885b7da45 175 PANTHER PTHR19384 1 120 4.8E-112 T 22-04-2016 YE2972 22aad295252b4d198d44818885b7da45 175 Gene3D G3DSA:3.40.50.360 1 168 9.9E-64 T 22-04-2016 IPR029039 Flavoprotein-like domain YE2972 22aad295252b4d198d44818885b7da45 175 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 22-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 YE2972 22aad295252b4d198d44818885b7da45 175 PANTHER PTHR19384:SF77 141 173 4.8E-112 T 22-04-2016 YE2972 22aad295252b4d198d44818885b7da45 175 PANTHER PTHR19384:SF77 1 120 4.8E-112 T 22-04-2016 YE1795 f3c2bc421e2aea9932121544f243d708 169 PANTHER PTHR11431 5 164 1.3E-46 T 22-04-2016 IPR001519 Ferritin GO:0006826|GO:0006879|GO:0008199 YE1795 f3c2bc421e2aea9932121544f243d708 169 SUPERFAMILY SSF47240 1 159 4.06E-57 T 22-04-2016 IPR009078 Ferritin-like superfamily YE1795 f3c2bc421e2aea9932121544f243d708 169 Pfam PF00210 Ferritin-like domain 8 143 1.3E-39 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 YE1795 f3c2bc421e2aea9932121544f243d708 169 PANTHER PTHR11431:SF4 5 164 1.3E-46 T 22-04-2016 YE1795 f3c2bc421e2aea9932121544f243d708 169 Gene3D G3DSA:1.20.1260.10 1 162 1.9E-60 T 22-04-2016 IPR012347 Ferritin-related YE2088 83b14ce7a1048f658757ad5300a03206 107 Pfam PF01381 Helix-turn-helix 42 93 5.9E-14 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YE2088 83b14ce7a1048f658757ad5300a03206 107 Gene3D G3DSA:1.10.260.40 33 97 1.2E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE2088 83b14ce7a1048f658757ad5300a03206 107 SMART SM00530 41 96 4.7E-13 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YE2088 83b14ce7a1048f658757ad5300a03206 107 SUPERFAMILY SSF47413 29 101 2.47E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE2868 d12e1bba6129bc722fc710327156b1c3 284 PANTHER PTHR11364 1 278 9.3E-122 T 22-04-2016 YE2868 d12e1bba6129bc722fc710327156b1c3 284 Gene3D G3DSA:3.40.250.10 155 279 1.8E-38 T 22-04-2016 IPR001763 Rhodanese-like domain YE2868 d12e1bba6129bc722fc710327156b1c3 284 Gene3D G3DSA:3.40.250.10 1 153 1.6E-47 T 22-04-2016 IPR001763 Rhodanese-like domain YE2868 d12e1bba6129bc722fc710327156b1c3 284 Pfam PF00581 Rhodanese-like domain 8 129 3.6E-18 T 22-04-2016 IPR001763 Rhodanese-like domain YE2868 d12e1bba6129bc722fc710327156b1c3 284 Pfam PF00581 Rhodanese-like domain 159 272 7.4E-11 T 22-04-2016 IPR001763 Rhodanese-like domain YE2868 d12e1bba6129bc722fc710327156b1c3 284 SUPERFAMILY SSF52821 159 280 8.25E-32 T 22-04-2016 IPR001763 Rhodanese-like domain YE2868 d12e1bba6129bc722fc710327156b1c3 284 SMART SM00450 156 276 7.5E-18 T 22-04-2016 IPR001763 Rhodanese-like domain YE2868 d12e1bba6129bc722fc710327156b1c3 284 SMART SM00450 7 133 4.6E-26 T 22-04-2016 IPR001763 Rhodanese-like domain YE2868 d12e1bba6129bc722fc710327156b1c3 284 SUPERFAMILY SSF52821 1 152 1.44E-44 T 22-04-2016 IPR001763 Rhodanese-like domain YE2868 d12e1bba6129bc722fc710327156b1c3 284 ProSitePatterns PS00380 Rhodanese signature 1. 43 54 - T 22-04-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 YE2509 f913ce9080ce6ff2a9b9458652ddbef7 125 Pfam PF04343 Protein of unknown function, DUF488 16 121 9.1E-26 T 22-04-2016 IPR007438 Protein of unknown function DUF488 YE2509 f913ce9080ce6ff2a9b9458652ddbef7 125 PANTHER PTHR36849:SF1 11 121 4.1E-30 T 22-04-2016 YE2509 f913ce9080ce6ff2a9b9458652ddbef7 125 PANTHER PTHR36849 11 121 4.1E-30 T 22-04-2016 YE1745 9fb1a6847438a928afa243dfc0168d94 103 ProDom PD070929 HDEB PRECURSOR SIGNAL EXPORTED PERIPLASMIC SECRETED ECS4389 10K-L SEQUENCING DIRECT 29 91 4.0E-22 T 22-04-2016 YE1745 9fb1a6847438a928afa243dfc0168d94 103 Gene3D G3DSA:1.10.890.10 27 96 3.1E-10 T 22-04-2016 IPR010486 HNS-dependent expression A/B YE1745 9fb1a6847438a928afa243dfc0168d94 103 Pfam PF06411 HdeA/HdeB family 7 92 9.4E-21 T 22-04-2016 IPR010486 HNS-dependent expression A/B YE1745 9fb1a6847438a928afa243dfc0168d94 103 Hamap MF_00947 Acid stress chaperone HdeB [hdeB]. 2 98 28.353 T 22-04-2016 IPR028623 HNS-dependent expression B GO:0009268|GO:0051082 YE2525 f9bb7da8b23614d6bf3259439f08ea28 132 PIRSF PIRSF039090 1 132 1.8E-42 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 YE2525 f9bb7da8b23614d6bf3259439f08ea28 132 SUPERFAMILY SSF101116 8 130 4.84E-41 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 YE2525 f9bb7da8b23614d6bf3259439f08ea28 132 PANTHER PTHR34773 1 125 7.1E-49 T 22-04-2016 YE2525 f9bb7da8b23614d6bf3259439f08ea28 132 Gene3D G3DSA:1.20.120.340 8 130 7.5E-46 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 YE2525 f9bb7da8b23614d6bf3259439f08ea28 132 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 125 3.0E-38 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 YE2525 f9bb7da8b23614d6bf3259439f08ea28 132 Pfam PF02561 Flagellar protein FliS 8 125 8.6E-40 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 YE3390 55d1bd71f1f4a75f188dde22098af74b 145 Pfam PF13924 Lipocalin-like domain 7 143 8.6E-44 T 22-04-2016 IPR024311 Lipocalin-like domain YE1274 e762f34c91ef870cc6cebeed53b318da 424 Gene3D G3DSA:2.40.160.60 28 424 3.8E-131 T 22-04-2016 YE1274 e762f34c91ef870cc6cebeed53b318da 424 PANTHER PTHR35093:SF3 5 424 3.8E-276 T 22-04-2016 YE1274 e762f34c91ef870cc6cebeed53b318da 424 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 19 424 5.4E-135 T 22-04-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) YE1274 e762f34c91ef870cc6cebeed53b318da 424 PANTHER PTHR35093 5 424 3.8E-276 T 22-04-2016 YE1274 e762f34c91ef870cc6cebeed53b318da 424 SUPERFAMILY SSF56935 28 424 2.52E-101 T 22-04-2016 YE0898 5f08b7382b8b9e8f39a525c44c7a420c 85 SUPERFAMILY SSF47336 4 83 6.67E-10 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YE0898 5f08b7382b8b9e8f39a525c44c7a420c 85 Pfam PF00550 Phosphopantetheine attachment site 11 62 1.3E-6 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YE0898 5f08b7382b8b9e8f39a525c44c7a420c 85 Gene3D G3DSA:1.10.1200.10 2 84 4.1E-14 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YE3787 030b9d77714872b86ba55f41195e5a83 136 Hamap MF_00954 Regulator of nucleoside diphosphate kinase [rnk]. 1 136 43.202 T 22-04-2016 IPR028625 Regulator of nucleoside diphosphate kinase GO:0065007|GO:0070063 YE3787 030b9d77714872b86ba55f41195e5a83 136 PANTHER PTHR30437 1 134 3.8E-71 T 22-04-2016 YE3787 030b9d77714872b86ba55f41195e5a83 136 SUPERFAMILY SSF54534 49 126 7.46E-18 T 22-04-2016 YE3787 030b9d77714872b86ba55f41195e5a83 136 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 50 124 9.8E-18 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 YE3787 030b9d77714872b86ba55f41195e5a83 136 Pfam PF14760 Rnk N-terminus 4 43 1.6E-12 T 22-04-2016 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain YE3787 030b9d77714872b86ba55f41195e5a83 136 Gene3D G3DSA:1.10.286.20 1 43 1.9E-17 T 22-04-2016 YE3787 030b9d77714872b86ba55f41195e5a83 136 PANTHER PTHR30437:SF5 1 134 3.8E-71 T 22-04-2016 YE3787 030b9d77714872b86ba55f41195e5a83 136 Gene3D G3DSA:3.10.50.30 46 136 7.7E-29 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 YE3873 c7973c5b5ee0117d4233c5001982a43f 436 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 1 436 2.0E-120 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 YE3873 c7973c5b5ee0117d4233c5001982a43f 436 Gene3D G3DSA:3.40.1160.10 3 40 2.1E-51 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YE3873 c7973c5b5ee0117d4233c5001982a43f 436 Gene3D G3DSA:3.40.1160.10 93 279 2.1E-51 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YE3873 c7973c5b5ee0117d4233c5001982a43f 436 SUPERFAMILY SSF55021 364 435 7.44E-15 T 22-04-2016 YE3873 c7973c5b5ee0117d4233c5001982a43f 436 SUPERFAMILY SSF53633 1 279 7.2E-66 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YE3873 c7973c5b5ee0117d4233c5001982a43f 436 PANTHER PTHR21499 1 436 5.5E-132 T 22-04-2016 YE3873 c7973c5b5ee0117d4233c5001982a43f 436 PANTHER PTHR21499:SF3 1 436 5.5E-132 T 22-04-2016 YE3873 c7973c5b5ee0117d4233c5001982a43f 436 Pfam PF01842 ACT domain 310 365 2.4E-6 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 YE3873 c7973c5b5ee0117d4233c5001982a43f 436 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 436 1.1E-130 T 22-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 YE3873 c7973c5b5ee0117d4233c5001982a43f 436 SUPERFAMILY SSF55021 283 344 8.84E-15 T 22-04-2016 YE3873 c7973c5b5ee0117d4233c5001982a43f 436 Pfam PF00696 Amino acid kinase family 17 264 6.1E-40 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YE3873 c7973c5b5ee0117d4233c5001982a43f 436 PIRSF PIRSF000726 1 436 9.9E-142 T 22-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 YE2545 d1ecd7f344be1d66ba0a7263af396970 138 Pfam PF16973 Flagellar motor switch protein FliN N-terminal 1 50 3.6E-23 T 22-04-2016 IPR031576 Flagellar motor switch protein FliN, N-terminal YE2545 d1ecd7f344be1d66ba0a7263af396970 138 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 57 127 9.0E-26 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) YE2545 d1ecd7f344be1d66ba0a7263af396970 138 PANTHER PTHR22617 1 136 5.2E-42 T 22-04-2016 YE2545 d1ecd7f344be1d66ba0a7263af396970 138 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 54 129 2.0E-33 T 22-04-2016 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 YE2545 d1ecd7f344be1d66ba0a7263af396970 138 PRINTS PR00956 Flagellar motor switch protein FliN signature 57 73 1.9E-30 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 YE2545 d1ecd7f344be1d66ba0a7263af396970 138 PRINTS PR00956 Flagellar motor switch protein FliN signature 74 90 1.9E-30 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 YE2545 d1ecd7f344be1d66ba0a7263af396970 138 PRINTS PR00956 Flagellar motor switch protein FliN signature 103 118 1.9E-30 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 YE2545 d1ecd7f344be1d66ba0a7263af396970 138 PRINTS PR00956 Flagellar motor switch protein FliN signature 90 103 1.9E-30 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 YE2545 d1ecd7f344be1d66ba0a7263af396970 138 SUPERFAMILY SSF101801 55 136 7.32E-27 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) YE2545 d1ecd7f344be1d66ba0a7263af396970 138 Gene3D G3DSA:2.30.330.10 53 137 3.9E-39 T 22-04-2016 YE3176 d7f975a554c6dcb552ed299bc3a8e7ac 226 SUPERFAMILY SSF51735 7 226 1.87E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3176 d7f975a554c6dcb552ed299bc3a8e7ac 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 1.7E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE3176 d7f975a554c6dcb552ed299bc3a8e7ac 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.7E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE3176 d7f975a554c6dcb552ed299bc3a8e7ac 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 71 82 1.7E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE3176 d7f975a554c6dcb552ed299bc3a8e7ac 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 1.7E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE3176 d7f975a554c6dcb552ed299bc3a8e7ac 226 PANTHER PTHR24322:SF343 10 128 2.9E-63 T 22-04-2016 YE3176 d7f975a554c6dcb552ed299bc3a8e7ac 226 PANTHER PTHR24322:SF343 148 180 2.9E-63 T 22-04-2016 YE3176 d7f975a554c6dcb552ed299bc3a8e7ac 226 Pfam PF00106 short chain dehydrogenase 8 187 2.3E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE3176 d7f975a554c6dcb552ed299bc3a8e7ac 226 Gene3D G3DSA:3.40.50.720 2 226 3.2E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3176 d7f975a554c6dcb552ed299bc3a8e7ac 226 PANTHER PTHR24322 10 128 2.9E-63 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE3176 d7f975a554c6dcb552ed299bc3a8e7ac 226 PANTHER PTHR24322 148 180 2.9E-63 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE1257 2ac69dfd90a5a4008df5eb7b6b564eff 476 Gene3D G3DSA:3.20.20.80 5 474 5.8E-154 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 YE1257 2ac69dfd90a5a4008df5eb7b6b564eff 476 PRINTS PR00131 Glycosyl hydrolase family 1 signature 391 402 3.2E-15 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YE1257 2ac69dfd90a5a4008df5eb7b6b564eff 476 PRINTS PR00131 Glycosyl hydrolase family 1 signature 304 318 3.2E-15 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YE1257 2ac69dfd90a5a4008df5eb7b6b564eff 476 PRINTS PR00131 Glycosyl hydrolase family 1 signature 437 449 3.2E-15 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YE1257 2ac69dfd90a5a4008df5eb7b6b564eff 476 PRINTS PR00131 Glycosyl hydrolase family 1 signature 370 378 3.2E-15 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YE1257 2ac69dfd90a5a4008df5eb7b6b564eff 476 PRINTS PR00131 Glycosyl hydrolase family 1 signature 412 429 3.2E-15 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YE1257 2ac69dfd90a5a4008df5eb7b6b564eff 476 PANTHER PTHR10353:SF74 1 475 0.0 T 22-04-2016 YE1257 2ac69dfd90a5a4008df5eb7b6b564eff 476 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 10 24 - T 22-04-2016 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site YE1257 2ac69dfd90a5a4008df5eb7b6b564eff 476 PANTHER PTHR10353 1 475 0.0 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YE1257 2ac69dfd90a5a4008df5eb7b6b564eff 476 SUPERFAMILY SSF51445 5 473 1.76E-160 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YE1257 2ac69dfd90a5a4008df5eb7b6b564eff 476 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 370 378 - T 22-04-2016 IPR018120 Glycoside hydrolase family 1, active site YE1257 2ac69dfd90a5a4008df5eb7b6b564eff 476 Pfam PF00232 Glycosyl hydrolase family 1 4 472 1.7E-136 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YE1442 cbb14c5f35c476b1ad4423a41cb039ba 414 PIRSF PIRSF006060 13 413 1.5E-10 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YE1442 cbb14c5f35c476b1ad4423a41cb039ba 414 PRINTS PR00166 Aromatic amino acid permease signature 155 175 5.5E-98 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YE1442 cbb14c5f35c476b1ad4423a41cb039ba 414 PRINTS PR00166 Aromatic amino acid permease signature 46 65 5.5E-98 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YE1442 cbb14c5f35c476b1ad4423a41cb039ba 414 PRINTS PR00166 Aromatic amino acid permease signature 232 251 5.5E-98 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YE1442 cbb14c5f35c476b1ad4423a41cb039ba 414 PRINTS PR00166 Aromatic amino acid permease signature 327 345 5.5E-98 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YE1442 cbb14c5f35c476b1ad4423a41cb039ba 414 PRINTS PR00166 Aromatic amino acid permease signature 348 367 5.5E-98 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YE1442 cbb14c5f35c476b1ad4423a41cb039ba 414 PRINTS PR00166 Aromatic amino acid permease signature 193 215 5.5E-98 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YE1442 cbb14c5f35c476b1ad4423a41cb039ba 414 PRINTS PR00166 Aromatic amino acid permease signature 91 111 5.5E-98 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YE1442 cbb14c5f35c476b1ad4423a41cb039ba 414 PRINTS PR00166 Aromatic amino acid permease signature 19 42 5.5E-98 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YE1442 cbb14c5f35c476b1ad4423a41cb039ba 414 PRINTS PR00166 Aromatic amino acid permease signature 293 312 5.5E-98 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YE1442 cbb14c5f35c476b1ad4423a41cb039ba 414 Pfam PF03222 Tryptophan/tyrosine permease family 11 401 3.3E-144 T 22-04-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 YE1442 cbb14c5f35c476b1ad4423a41cb039ba 414 PANTHER PTHR32195:SF18 4 410 2.6E-207 T 22-04-2016 YE1442 cbb14c5f35c476b1ad4423a41cb039ba 414 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 16 395 4.3E-148 T 22-04-2016 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 YE1442 cbb14c5f35c476b1ad4423a41cb039ba 414 PANTHER PTHR32195 4 410 2.6E-207 T 22-04-2016 YE0243 b405d4c52ed831bcc201d34abb9f1cdf 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 276 7.5E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE0243 b405d4c52ed831bcc201d34abb9f1cdf 281 PANTHER PTHR32243:SF31 1 279 9.4E-144 T 22-04-2016 IPR030165 sn-glycerol-3-phosphate transport system permease protein UgpE GO:0001407|GO:0005887|GO:0015794|GO:0055052 YE0243 b405d4c52ed831bcc201d34abb9f1cdf 281 PANTHER PTHR32243 1 279 9.4E-144 T 22-04-2016 YE0243 b405d4c52ed831bcc201d34abb9f1cdf 281 Gene3D G3DSA:1.10.3720.10 4 270 1.7E-53 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE0243 b405d4c52ed831bcc201d34abb9f1cdf 281 SUPERFAMILY SSF161098 4 277 2.8E-58 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE0795 439c3e9ace527fdc6f4a402a87a1e9be 416 SUPERFAMILY SSF53901 8 258 1.3E-43 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YE0795 439c3e9ace527fdc6f4a402a87a1e9be 416 SMART SM00825 Beta-ketoacyl synthase 10 414 8.4E-9 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YE0795 439c3e9ace527fdc6f4a402a87a1e9be 416 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 8 249 5.5E-30 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal YE0795 439c3e9ace527fdc6f4a402a87a1e9be 416 Gene3D G3DSA:3.40.47.10 269 413 1.2E-48 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YE0795 439c3e9ace527fdc6f4a402a87a1e9be 416 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 259 373 3.7E-32 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal YE0795 439c3e9ace527fdc6f4a402a87a1e9be 416 PANTHER PTHR11712 1 413 7.7E-99 T 22-04-2016 YE0795 439c3e9ace527fdc6f4a402a87a1e9be 416 SUPERFAMILY SSF53901 220 413 1.91E-60 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YE0795 439c3e9ace527fdc6f4a402a87a1e9be 416 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 159 175 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site YE0795 439c3e9ace527fdc6f4a402a87a1e9be 416 Gene3D G3DSA:3.40.47.10 4 264 7.6E-41 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YE0164 2315d8972e50a70671359fc9b8d085ba 608 SUPERFAMILY SSF49265 35 153 7.55E-10 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 YE0164 2315d8972e50a70671359fc9b8d085ba 608 Pfam PF12708 Pectate lyase superfamily protein 156 197 5.4E-7 T 22-04-2016 IPR024535 Pectate lyase superfamily protein YE0164 2315d8972e50a70671359fc9b8d085ba 608 Gene3D G3DSA:2.60.40.10 36 151 2.3E-10 T 22-04-2016 IPR013783 Immunoglobulin-like fold YE0164 2315d8972e50a70671359fc9b8d085ba 608 SMART SM00060 35 140 5.5E-7 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 YE0164 2315d8972e50a70671359fc9b8d085ba 608 Gene3D G3DSA:2.160.20.10 317 565 3.8E-86 T 22-04-2016 IPR012334 Pectin lyase fold YE0164 2315d8972e50a70671359fc9b8d085ba 608 Gene3D G3DSA:2.160.20.10 152 284 3.8E-86 T 22-04-2016 IPR012334 Pectin lyase fold YE0164 2315d8972e50a70671359fc9b8d085ba 608 Pfam PF00295 Glycosyl hydrolases family 28 324 562 7.6E-24 T 22-04-2016 IPR000743 Glycoside hydrolase, family 28 GO:0004650|GO:0005975 YE0164 2315d8972e50a70671359fc9b8d085ba 608 PANTHER PTHR31339:SF0 323 533 5.1E-54 T 22-04-2016 YE0164 2315d8972e50a70671359fc9b8d085ba 608 PANTHER PTHR31339:SF0 80 274 5.1E-54 T 22-04-2016 YE0164 2315d8972e50a70671359fc9b8d085ba 608 PANTHER PTHR31339 323 533 5.1E-54 T 22-04-2016 YE0164 2315d8972e50a70671359fc9b8d085ba 608 PANTHER PTHR31339 80 274 5.1E-54 T 22-04-2016 YE0164 2315d8972e50a70671359fc9b8d085ba 608 SUPERFAMILY SSF51126 146 564 1.12E-73 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YE2947 1cf9e6fda426e3dafd2b613ba329bb40 115 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 113 7.5E-36 T 22-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 YE2947 1cf9e6fda426e3dafd2b613ba329bb40 115 PIRSF PIRSF000169 1 115 2.0E-41 T 22-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 YE2947 1cf9e6fda426e3dafd2b613ba329bb40 115 Gene3D G3DSA:1.20.1300.10 1 114 5.3E-40 T 22-04-2016 YE2947 1cf9e6fda426e3dafd2b613ba329bb40 115 SUPERFAMILY SSF81343 5 114 8.5E-29 T 22-04-2016 YE2947 1cf9e6fda426e3dafd2b613ba329bb40 115 PANTHER PTHR38689 2 115 6.2E-60 T 22-04-2016 YE2947 1cf9e6fda426e3dafd2b613ba329bb40 115 PANTHER PTHR38689:SF1 2 115 6.2E-60 T 22-04-2016 YE3821 7aa7e025872f8906f1efe782d20e33ef 70 PRINTS PR00050 Cold shock protein signature 43 61 1.2E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YE3821 7aa7e025872f8906f1efe782d20e33ef 70 PRINTS PR00050 Cold shock protein signature 7 22 1.2E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YE3821 7aa7e025872f8906f1efe782d20e33ef 70 PRINTS PR00050 Cold shock protein signature 28 37 1.2E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YE3821 7aa7e025872f8906f1efe782d20e33ef 70 SUPERFAMILY SSF50249 3 69 3.09E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE3821 7aa7e025872f8906f1efe782d20e33ef 70 PANTHER PTHR11544 1 70 2.4E-47 T 22-04-2016 YE3821 7aa7e025872f8906f1efe782d20e33ef 70 SMART SM00357 6 70 5.6E-33 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 YE3821 7aa7e025872f8906f1efe782d20e33ef 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 1.6E-32 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YE3821 7aa7e025872f8906f1efe782d20e33ef 70 PANTHER PTHR11544:SF54 1 70 2.4E-47 T 22-04-2016 YE3821 7aa7e025872f8906f1efe782d20e33ef 70 Gene3D G3DSA:2.40.50.140 5 68 5.6E-31 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE3821 7aa7e025872f8906f1efe782d20e33ef 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 22-04-2016 IPR019844 Cold-shock conserved site YE3821 7aa7e025872f8906f1efe782d20e33ef 70 PIRSF PIRSF002599 1 70 5.5E-24 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 YE3822 7aa7e025872f8906f1efe782d20e33ef 70 PRINTS PR00050 Cold shock protein signature 43 61 1.2E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YE3822 7aa7e025872f8906f1efe782d20e33ef 70 PRINTS PR00050 Cold shock protein signature 7 22 1.2E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YE3822 7aa7e025872f8906f1efe782d20e33ef 70 PRINTS PR00050 Cold shock protein signature 28 37 1.2E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YE3822 7aa7e025872f8906f1efe782d20e33ef 70 SUPERFAMILY SSF50249 3 69 3.09E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE3822 7aa7e025872f8906f1efe782d20e33ef 70 PANTHER PTHR11544 1 70 2.4E-47 T 22-04-2016 YE3822 7aa7e025872f8906f1efe782d20e33ef 70 SMART SM00357 6 70 5.6E-33 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 YE3822 7aa7e025872f8906f1efe782d20e33ef 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 1.6E-32 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YE3822 7aa7e025872f8906f1efe782d20e33ef 70 PANTHER PTHR11544:SF54 1 70 2.4E-47 T 22-04-2016 YE3822 7aa7e025872f8906f1efe782d20e33ef 70 Gene3D G3DSA:2.40.50.140 5 68 5.6E-31 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE3822 7aa7e025872f8906f1efe782d20e33ef 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 22-04-2016 IPR019844 Cold-shock conserved site YE3822 7aa7e025872f8906f1efe782d20e33ef 70 PIRSF PIRSF002599 1 70 5.5E-24 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 YE4005 6b23ae3df8ed93f26e96e9e5b8ecc43a 450 SUPERFAMILY SSF55874 292 442 6.94E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE4005 6b23ae3df8ed93f26e96e9e5b8ecc43a 450 SMART SM00304 180 232 1.4E-5 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YE4005 6b23ae3df8ed93f26e96e9e5b8ecc43a 450 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 438 1.5E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE4005 6b23ae3df8ed93f26e96e9e5b8ecc43a 450 PANTHER PTHR24423 174 444 5.5E-56 T 22-04-2016 YE4005 6b23ae3df8ed93f26e96e9e5b8ecc43a 450 PANTHER PTHR24423 1 12 5.5E-56 T 22-04-2016 YE4005 6b23ae3df8ed93f26e96e9e5b8ecc43a 450 SUPERFAMILY SSF47384 217 291 8.63E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE4005 6b23ae3df8ed93f26e96e9e5b8ecc43a 450 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 289 1.1E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE4005 6b23ae3df8ed93f26e96e9e5b8ecc43a 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 395 9.6E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE4005 6b23ae3df8ed93f26e96e9e5b8ecc43a 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 418 9.6E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE4005 6b23ae3df8ed93f26e96e9e5b8ecc43a 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 381 9.6E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE4005 6b23ae3df8ed93f26e96e9e5b8ecc43a 450 Gene3D G3DSA:1.10.287.130 229 288 9.5E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE4005 6b23ae3df8ed93f26e96e9e5b8ecc43a 450 SMART SM00387 332 440 5.3E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE4005 6b23ae3df8ed93f26e96e9e5b8ecc43a 450 Gene3D G3DSA:3.30.565.10 293 442 2.4E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE4005 6b23ae3df8ed93f26e96e9e5b8ecc43a 450 SMART SM00388 233 293 2.8E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE4005 6b23ae3df8ed93f26e96e9e5b8ecc43a 450 Pfam PF00672 HAMP domain 162 225 1.8E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YE1918 d0a1162ac8bd49845a74ad5bc8fc2a32 98 SMART SM00411 3 92 2.2E-42 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YE1918 d0a1162ac8bd49845a74ad5bc8fc2a32 98 Gene3D G3DSA:4.10.520.10 2 93 6.4E-36 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 YE1918 d0a1162ac8bd49845a74ad5bc8fc2a32 98 Pfam PF00216 Bacterial DNA-binding protein 3 91 9.7E-31 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YE1918 d0a1162ac8bd49845a74ad5bc8fc2a32 98 PANTHER PTHR33175:SF2 2 98 4.8E-56 T 22-04-2016 YE1918 d0a1162ac8bd49845a74ad5bc8fc2a32 98 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 97 1.4E-53 T 22-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 YE1918 d0a1162ac8bd49845a74ad5bc8fc2a32 98 SUPERFAMILY SSF47729 3 92 2.21E-31 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 YE1918 d0a1162ac8bd49845a74ad5bc8fc2a32 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 YE1918 d0a1162ac8bd49845a74ad5bc8fc2a32 98 PANTHER PTHR33175 2 98 4.8E-56 T 22-04-2016 YE1918 d0a1162ac8bd49845a74ad5bc8fc2a32 98 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 3.05E-17 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YE1918 d0a1162ac8bd49845a74ad5bc8fc2a32 98 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 3.05E-17 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YE1918 d0a1162ac8bd49845a74ad5bc8fc2a32 98 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 3.05E-17 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 YE1918 d0a1162ac8bd49845a74ad5bc8fc2a32 98 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 31.046 T 22-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 YE0539 4038afb84c4939be5fa576d97c1e85d7 364 Gene3D G3DSA:1.20.1090.10 160 362 2.3E-69 T 22-04-2016 YE0539 4038afb84c4939be5fa576d97c1e85d7 364 SUPERFAMILY SSF56796 2 353 6.28E-91 T 22-04-2016 YE0539 4038afb84c4939be5fa576d97c1e85d7 364 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 348 8.0E-70 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 YE0539 4038afb84c4939be5fa576d97c1e85d7 364 PANTHER PTHR11496 1 361 1.3E-169 T 22-04-2016 YE0539 4038afb84c4939be5fa576d97c1e85d7 364 Gene3D G3DSA:3.40.50.1970 2 158 3.0E-45 T 22-04-2016 YE0539 4038afb84c4939be5fa576d97c1e85d7 364 PIRSF PIRSF000112 1 360 6.3E-96 T 22-04-2016 YE0539 4038afb84c4939be5fa576d97c1e85d7 364 PANTHER PTHR11496:SF57 1 361 1.3E-169 T 22-04-2016 YE0539 4038afb84c4939be5fa576d97c1e85d7 364 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 150 178 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 YE0539 4038afb84c4939be5fa576d97c1e85d7 364 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 241 261 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 YE3146 754b725f89cd81109de08e62ca17877e 456 SUPERFAMILY SSF103473 3 392 9.29E-63 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE3146 754b725f89cd81109de08e62ca17877e 456 Gene3D G3DSA:1.20.1250.20 15 193 1.0E-33 T 22-04-2016 YE3146 754b725f89cd81109de08e62ca17877e 456 Gene3D G3DSA:1.20.1250.20 214 395 2.2E-22 T 22-04-2016 YE3146 754b725f89cd81109de08e62ca17877e 456 PANTHER PTHR23510 1 402 2.2E-264 T 22-04-2016 YE3146 754b725f89cd81109de08e62ca17877e 456 PANTHER PTHR23510:SF6 1 402 2.2E-264 T 22-04-2016 YE3146 754b725f89cd81109de08e62ca17877e 456 Pfam PF07690 Major Facilitator Superfamily 22 356 3.8E-40 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YE2506 4d4fde6b1ec8cfb703329e4a6f252f09 239 SMART SM00448 2 117 5.6E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE2506 4d4fde6b1ec8cfb703329e4a6f252f09 239 SUPERFAMILY SSF52172 1 136 2.85E-30 T 22-04-2016 IPR011006 CheY-like superfamily YE2506 4d4fde6b1ec8cfb703329e4a6f252f09 239 PANTHER PTHR26402 2 186 5.6E-57 T 22-04-2016 YE2506 4d4fde6b1ec8cfb703329e4a6f252f09 239 PIRSF PIRSF006171 1 230 6.9E-78 T 22-04-2016 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0001071|GO:0003677|GO:0005737|GO:0009605 YE2506 4d4fde6b1ec8cfb703329e4a6f252f09 239 Pfam PF00072 Response regulator receiver domain 4 117 4.0E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE2506 4d4fde6b1ec8cfb703329e4a6f252f09 239 PANTHER PTHR26402:SF522 2 186 5.6E-57 T 22-04-2016 YE2506 4d4fde6b1ec8cfb703329e4a6f252f09 239 Gene3D G3DSA:3.40.50.2300 1 127 7.0E-26 T 22-04-2016 YE1259 f1caaddffcc13416cca987c3b4afc156 219 SUPERFAMILY SSF46785 61 189 2.06E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1259 f1caaddffcc13416cca987c3b4afc156 219 PANTHER PTHR33169 49 208 3.6E-55 T 22-04-2016 YE1259 f1caaddffcc13416cca987c3b4afc156 219 Pfam PF03551 Transcriptional regulator PadR-like family 66 135 3.7E-20 T 22-04-2016 IPR005149 Transcription regulator PadR, N-terminal YE1259 f1caaddffcc13416cca987c3b4afc156 219 Gene3D G3DSA:1.10.10.10 50 153 2.3E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1259 f1caaddffcc13416cca987c3b4afc156 219 PANTHER PTHR33169:SF2 49 208 3.6E-55 T 22-04-2016 YE0738 0a2e85295a9c12f169d3660e5c3c15d8 267 Gene3D G3DSA:3.40.50.1980 136 256 3.1E-30 T 22-04-2016 YE0738 0a2e85295a9c12f169d3660e5c3c15d8 267 Gene3D G3DSA:3.40.50.1980 15 133 4.4E-32 T 22-04-2016 YE0738 0a2e85295a9c12f169d3660e5c3c15d8 267 Hamap MF_01000 Vitamin B12-binding protein [btuF]. 1 260 49.845 T 22-04-2016 IPR023544 ABC transporter, vitamin B12-binding protein GO:0015889|GO:0031419|GO:0042597 YE0738 0a2e85295a9c12f169d3660e5c3c15d8 267 Pfam PF01497 Periplasmic binding protein 18 216 1.4E-25 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 YE0738 0a2e85295a9c12f169d3660e5c3c15d8 267 PANTHER PTHR30535 15 256 3.8E-53 T 22-04-2016 YE0738 0a2e85295a9c12f169d3660e5c3c15d8 267 SUPERFAMILY SSF53807 15 256 3.36E-55 T 22-04-2016 YE1239 3519ce2efbde7a4caf1f013521c3f151 349 Gene3D G3DSA:3.40.50.300 3 238 6.5E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1239 3519ce2efbde7a4caf1f013521c3f151 349 SUPERFAMILY SSF52540 4 239 2.08E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1239 3519ce2efbde7a4caf1f013521c3f151 349 SMART SM00382 28 213 1.1E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain YE1239 3519ce2efbde7a4caf1f013521c3f151 349 Pfam PF00005 ABC transporter 19 163 2.3E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE1239 3519ce2efbde7a4caf1f013521c3f151 349 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE1239 3519ce2efbde7a4caf1f013521c3f151 349 SUPERFAMILY SSF50331 244 340 9.35E-5 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal YE1239 3519ce2efbde7a4caf1f013521c3f151 349 PANTHER PTHR24220 262 283 2.0E-124 T 22-04-2016 YE1239 3519ce2efbde7a4caf1f013521c3f151 349 PANTHER PTHR24220 5 242 2.0E-124 T 22-04-2016 YE1239 3519ce2efbde7a4caf1f013521c3f151 349 PANTHER PTHR24220:SF282 262 283 2.0E-124 T 22-04-2016 YE1239 3519ce2efbde7a4caf1f013521c3f151 349 PANTHER PTHR24220:SF282 5 242 2.0E-124 T 22-04-2016 YE4187 3b838e214755c9358bb806cd6918e70a 163 Pfam PF03928 Haem-degrading 31 156 4.8E-26 T 22-04-2016 IPR005624 Haem-degrading YE4187 3b838e214755c9358bb806cd6918e70a 163 PANTHER PTHR34309 1 162 2.6E-29 T 22-04-2016 YE4187 3b838e214755c9358bb806cd6918e70a 163 PANTHER PTHR34309:SF1 1 162 2.6E-29 T 22-04-2016 YE4187 3b838e214755c9358bb806cd6918e70a 163 SUPERFAMILY SSF143744 25 158 3.79E-33 T 22-04-2016 YE3651 5a3f1a6b10934cdb2a46b68fe0238955 385 Gene3D G3DSA:3.40.50.1970 1 182 1.4E-54 T 22-04-2016 YE3651 5a3f1a6b10934cdb2a46b68fe0238955 385 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 171 199 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 YE3651 5a3f1a6b10934cdb2a46b68fe0238955 385 SUPERFAMILY SSF56796 1 384 4.97E-106 T 22-04-2016 YE3651 5a3f1a6b10934cdb2a46b68fe0238955 385 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 262 282 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 YE3651 5a3f1a6b10934cdb2a46b68fe0238955 385 Gene3D G3DSA:1.20.1090.10 183 384 3.2E-52 T 22-04-2016 YE3651 5a3f1a6b10934cdb2a46b68fe0238955 385 PANTHER PTHR11496:SF65 1 385 6.8E-240 T 22-04-2016 YE3651 5a3f1a6b10934cdb2a46b68fe0238955 385 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 358 8.4E-89 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 YE3651 5a3f1a6b10934cdb2a46b68fe0238955 385 PANTHER PTHR11496 1 385 6.8E-240 T 22-04-2016 YE0424 8b46a31e6edc1a67d7c8e434e3a3f064 482 PANTHER PTHR30023:SF0 13 478 6.1E-143 T 22-04-2016 YE0424 8b46a31e6edc1a67d7c8e434e3a3f064 482 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 26 473 5.2E-165 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 YE0424 8b46a31e6edc1a67d7c8e434e3a3f064 482 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 63 82 1.9E-38 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 YE0424 8b46a31e6edc1a67d7c8e434e3a3f064 482 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 291 313 1.9E-38 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 YE0424 8b46a31e6edc1a67d7c8e434e3a3f064 482 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 365 379 1.9E-38 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 YE0424 8b46a31e6edc1a67d7c8e434e3a3f064 482 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 429 442 1.9E-38 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 YE0424 8b46a31e6edc1a67d7c8e434e3a3f064 482 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 350 364 1.9E-38 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 YE0424 8b46a31e6edc1a67d7c8e434e3a3f064 482 SUPERFAMILY SSF56601 28 479 1.15E-103 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YE0424 8b46a31e6edc1a67d7c8e434e3a3f064 482 Gene3D G3DSA:3.40.710.10 232 475 3.2E-68 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YE0424 8b46a31e6edc1a67d7c8e434e3a3f064 482 PANTHER PTHR30023 13 478 6.1E-143 T 22-04-2016 YE0424 8b46a31e6edc1a67d7c8e434e3a3f064 482 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 52 452 1.6E-169 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 YE4066 4ff551aac9a22a3f0d77aee517453a09 501 SUPERFAMILY SSF63411 29 240 6.29E-26 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 YE4066 4ff551aac9a22a3f0d77aee517453a09 501 PANTHER PTHR11851 1 485 2.7E-82 T 22-04-2016 YE4066 4ff551aac9a22a3f0d77aee517453a09 501 Gene3D G3DSA:3.30.830.10 21 251 9.2E-24 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 YE4066 4ff551aac9a22a3f0d77aee517453a09 501 Pfam PF05193 Peptidase M16 inactive domain 202 376 2.9E-15 T 22-04-2016 IPR007863 Peptidase M16, C-terminal YE4066 4ff551aac9a22a3f0d77aee517453a09 501 SUPERFAMILY SSF63411 342 456 1.67E-5 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 YE4066 4ff551aac9a22a3f0d77aee517453a09 501 Pfam PF00675 Insulinase (Peptidase family M16) 51 180 4.2E-10 T 22-04-2016 IPR011765 Peptidase M16, N-terminal YE4066 4ff551aac9a22a3f0d77aee517453a09 501 PANTHER PTHR11851:SF136 1 485 2.7E-82 T 22-04-2016 YE3881 b28fdcabf4ce720f9526c14a39eb7907 532 PANTHER PTHR21631:SF1 1 531 4.8E-275 T 22-04-2016 YE3881 b28fdcabf4ce720f9526c14a39eb7907 532 Pfam PF01274 Malate synthase 12 531 9.5E-205 T 22-04-2016 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 YE3881 b28fdcabf4ce720f9526c14a39eb7907 532 PIRSF PIRSF001363 1 532 3.0E-248 T 22-04-2016 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 YE3881 b28fdcabf4ce720f9526c14a39eb7907 532 PANTHER PTHR21631 1 531 4.8E-275 T 22-04-2016 YE3881 b28fdcabf4ce720f9526c14a39eb7907 532 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 23 531 5.5E-251 T 22-04-2016 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 YE3881 b28fdcabf4ce720f9526c14a39eb7907 532 Gene3D G3DSA:1.20.1220.12 413 525 1.5E-37 T 22-04-2016 YE3881 b28fdcabf4ce720f9526c14a39eb7907 532 Gene3D G3DSA:3.20.20.360 72 412 3.6E-125 T 22-04-2016 YE3881 b28fdcabf4ce720f9526c14a39eb7907 532 SUPERFAMILY SSF51645 9 531 4.32E-189 T 22-04-2016 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 YE0522 565085813bf54a3262b571754305873c 186 Gene3D G3DSA:3.40.50.1820 85 181 3.1E-19 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE0522 565085813bf54a3262b571754305873c 186 Gene3D G3DSA:3.40.50.1820 6 79 2.4E-9 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE3924 45d53e98b9ae88d2567b52bea3a6f87c 103 PANTHER PTHR11700 1 102 1.1E-55 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 YE3924 45d53e98b9ae88d2567b52bea3a6f87c 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 2.0E-35 T 22-04-2016 IPR027486 Ribosomal protein S10 domain YE3924 45d53e98b9ae88d2567b52bea3a6f87c 103 SUPERFAMILY SSF54999 5 101 1.26E-36 T 22-04-2016 IPR027486 Ribosomal protein S10 domain YE3924 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.2E-18 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 YE3924 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.2E-18 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 YE3924 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.2E-18 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 YE3924 45d53e98b9ae88d2567b52bea3a6f87c 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.0E-46 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 YE3924 45d53e98b9ae88d2567b52bea3a6f87c 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 22-04-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3924 45d53e98b9ae88d2567b52bea3a6f87c 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.353 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 YE3924 45d53e98b9ae88d2567b52bea3a6f87c 103 SMART SM01403 7 101 1.0E-56 T 22-04-2016 IPR027486 Ribosomal protein S10 domain YE3924 45d53e98b9ae88d2567b52bea3a6f87c 103 Gene3D G3DSA:3.30.70.600 3 102 8.7E-44 T 22-04-2016 IPR027486 Ribosomal protein S10 domain YE0837 333253b37d577467ad76793efca3797d 142 PANTHER PTHR30353:SF12 5 142 7.1E-55 T 22-04-2016 YE0837 333253b37d577467ad76793efca3797d 142 Pfam PF09335 SNARE associated Golgi protein 25 133 5.3E-8 T 22-04-2016 IPR032816 SNARE associated Golgi protein YE0837 333253b37d577467ad76793efca3797d 142 PANTHER PTHR30353 5 142 7.1E-55 T 22-04-2016 IPR032818 DedA family YE0837 333253b37d577467ad76793efca3797d 142 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 10 109 0.001 T 22-04-2016 IPR020143 Uncharacterised protein family, RP436 YE0947 4625d135fc2bf10dd38ad7818dd99b9a 322 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 317 1.7E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE0947 4625d135fc2bf10dd38ad7818dd99b9a 322 SUPERFAMILY SSF161098 92 302 1.14E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE0947 4625d135fc2bf10dd38ad7818dd99b9a 322 PANTHER PTHR30465:SF73 9 320 2.2E-238 T 22-04-2016 YE0947 4625d135fc2bf10dd38ad7818dd99b9a 322 Gene3D G3DSA:1.10.3720.10 90 316 2.0E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE0947 4625d135fc2bf10dd38ad7818dd99b9a 322 PANTHER PTHR30465 9 320 2.2E-238 T 22-04-2016 YE1362 202058a4e60563bd2fac2b53f6ee9188 176 Gene3D G3DSA:3.40.50.300 2 168 1.6E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1362 202058a4e60563bd2fac2b53f6ee9188 176 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 6 165 3.2E-64 T 22-04-2016 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530|UniPathway: UPA00792 YE1362 202058a4e60563bd2fac2b53f6ee9188 176 Pfam PF01202 Shikimate kinase 12 130 1.6E-10 T 22-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 YE1362 202058a4e60563bd2fac2b53f6ee9188 176 PANTHER PTHR11603 1 173 2.3E-86 T 22-04-2016 YE1362 202058a4e60563bd2fac2b53f6ee9188 176 SUPERFAMILY SSF52540 2 167 1.93E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2807 1e4795e6459bd1b0ffc48a7ab02b7aa4 133 Pfam PF07450 Formate hydrogenlyase maturation protein HycH 3 131 1.2E-57 T 22-04-2016 IPR010005 Formate hydrogenlyase maturation HycH YE2807 1e4795e6459bd1b0ffc48a7ab02b7aa4 133 ProDom PD021295 MATURATION HYDROGENLYASE FORMATE HYCH LYASE HYCE PROCESSING OXIDOREDUCTASE J COMPONENT 3 131 2.0E-33 T 22-04-2016 IPR010005 Formate hydrogenlyase maturation HycH YE3883 673eae6dbe5dd3a50139738399b15f85 180 SUPERFAMILY SSF51161 4 175 7.9E-46 T 22-04-2016 IPR011004 Trimeric LpxA-like YE3883 673eae6dbe5dd3a50139738399b15f85 180 Gene3D G3DSA:2.160.10.10 5 176 3.4E-45 T 22-04-2016 YE3883 673eae6dbe5dd3a50139738399b15f85 180 PANTHER PTHR13061 5 178 3.0E-71 T 22-04-2016 YE3883 673eae6dbe5dd3a50139738399b15f85 180 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 97 130 9.0E-8 T 22-04-2016 IPR001451 Hexapeptide repeat YE3883 673eae6dbe5dd3a50139738399b15f85 180 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 14 46 2.8E-5 T 22-04-2016 IPR001451 Hexapeptide repeat YE1315 069ead8f8713106d3dd6e93a320a83f7 505 Gene3D G3DSA:3.40.50.2020 276 446 2.7E-47 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YE1315 069ead8f8713106d3dd6e93a320a83f7 505 PANTHER PTHR11907 1 480 2.2E-263 T 22-04-2016 YE1315 069ead8f8713106d3dd6e93a320a83f7 505 Pfam PF00156 Phosphoribosyl transferase domain 292 394 8.1E-8 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 YE1315 069ead8f8713106d3dd6e93a320a83f7 505 Pfam PF13522 Glutamine amidotransferase domain 65 210 1.7E-15 T 22-04-2016 YE1315 069ead8f8713106d3dd6e93a320a83f7 505 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 466 6.5E-162 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 YE1315 069ead8f8713106d3dd6e93a320a83f7 505 PANTHER PTHR11907:SF0 1 480 2.2E-263 T 22-04-2016 YE1315 069ead8f8713106d3dd6e93a320a83f7 505 PIRSF PIRSF000485 1 483 7.2E-170 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 YE1315 069ead8f8713106d3dd6e93a320a83f7 505 Gene3D G3DSA:3.60.20.10 2 260 1.3E-64 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal YE1315 069ead8f8713106d3dd6e93a320a83f7 505 SUPERFAMILY SSF56235 2 259 5.83E-76 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal YE1315 069ead8f8713106d3dd6e93a320a83f7 505 SUPERFAMILY SSF53271 252 485 1.08E-72 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YE1315 069ead8f8713106d3dd6e93a320a83f7 505 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 468 44.881 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 YE0209 305f3220620b1c40080c1ebe8a7c1dd6 332 Gene3D G3DSA:3.20.20.190 2 326 4.6E-92 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 YE0209 305f3220620b1c40080c1ebe8a7c1dd6 332 PANTHER PTHR23344:SF7 1 332 8.7E-117 T 22-04-2016 YE0209 305f3220620b1c40080c1ebe8a7c1dd6 332 SUPERFAMILY SSF51695 2 325 1.62E-90 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 YE0209 305f3220620b1c40080c1ebe8a7c1dd6 332 PANTHER PTHR23344 1 332 8.7E-117 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 YE0209 305f3220620b1c40080c1ebe8a7c1dd6 332 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 5 320 7.4E-72 T 22-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 YE3011 ecb870f1d04d06395470d878e9f90353 127 TIGRFAM TIGR00494 crcB: protein CrcB 6 120 4.9E-37 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 YE3011 ecb870f1d04d06395470d878e9f90353 127 PANTHER PTHR28259 1 121 5.6E-45 T 22-04-2016 YE3011 ecb870f1d04d06395470d878e9f90353 127 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 7 116 4.0E-24 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 YE3011 ecb870f1d04d06395470d878e9f90353 127 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 5 122 19.28 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 YE2284 4c88d8515658ebf9ea76b2697e69fa3b 524 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 524 366.442 T 22-04-2016 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 YE2284 4c88d8515658ebf9ea76b2697e69fa3b 524 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 511 9.3E-279 T 22-04-2016 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 YE2284 4c88d8515658ebf9ea76b2697e69fa3b 524 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 1 512 1.1E-278 T 22-04-2016 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 YE2284 4c88d8515658ebf9ea76b2697e69fa3b 524 PANTHER PTHR10283 196 524 3.3E-304 T 22-04-2016 YE2284 4c88d8515658ebf9ea76b2697e69fa3b 524 PANTHER PTHR10283 12 168 3.3E-304 T 22-04-2016 YE2284 4c88d8515658ebf9ea76b2697e69fa3b 524 PANTHER PTHR10283:SF93 196 524 3.3E-304 T 22-04-2016 YE2284 4c88d8515658ebf9ea76b2697e69fa3b 524 PANTHER PTHR10283:SF93 12 168 3.3E-304 T 22-04-2016 YE0455 db7f57fd745fdd72ead39ba7475b5265 721 PIRSF PIRSF009393 1 720 1.1E-291 T 22-04-2016 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 YE0455 db7f57fd745fdd72ead39ba7475b5265 721 Gene3D G3DSA:3.40.50.220 1 108 7.8E-36 T 22-04-2016 IPR027464 Ornithine decarboxylase, N-terminal domain KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 YE0455 db7f57fd745fdd72ead39ba7475b5265 721 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 5 103 4.2E-25 T 22-04-2016 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 YE0455 db7f57fd745fdd72ead39ba7475b5265 721 Gene3D G3DSA:3.40.640.10 109 419 2.8E-117 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YE0455 db7f57fd745fdd72ead39ba7475b5265 721 SUPERFAMILY SSF52172 1 108 2.83E-34 T 22-04-2016 IPR011006 CheY-like superfamily YE0455 db7f57fd745fdd72ead39ba7475b5265 721 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 576 704 6.2E-45 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 YE0455 db7f57fd745fdd72ead39ba7475b5265 721 Gene3D G3DSA:3.90.100.10 602 720 3.0E-37 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 YE0455 db7f57fd745fdd72ead39ba7475b5265 721 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 350 364 - T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 YE0455 db7f57fd745fdd72ead39ba7475b5265 721 PANTHER PTHR11751:SF425 110 580 2.0E-232 T 22-04-2016 YE0455 db7f57fd745fdd72ead39ba7475b5265 721 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 109 549 2.2E-196 T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 YE0455 db7f57fd745fdd72ead39ba7475b5265 721 SUPERFAMILY SSF55904 572 719 4.84E-45 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 YE0455 db7f57fd745fdd72ead39ba7475b5265 721 SUPERFAMILY SSF53383 109 566 4.34E-120 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YE0455 db7f57fd745fdd72ead39ba7475b5265 721 Gene3D G3DSA:3.90.1150.10 421 600 4.2E-68 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YE0455 db7f57fd745fdd72ead39ba7475b5265 721 PANTHER PTHR11751 110 580 2.0E-232 T 22-04-2016 YE0455 db7f57fd745fdd72ead39ba7475b5265 721 TIGRFAM TIGR04301 ODC_inducible: ornithine decarboxylase SpeF 1 719 0.0 T 22-04-2016 IPR027568 Ornithine decarboxylase SpeF GO:0004586 KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 YE2573 364856888ab55d10cd7473e543e0ca91 545 Pfam PF00672 HAMP domain 196 261 3.2E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YE2573 364856888ab55d10cd7473e543e0ca91 545 Gene3D G3DSA:1.10.287.950 282 486 5.2E-64 T 22-04-2016 YE2573 364856888ab55d10cd7473e543e0ca91 545 SMART SM00319 44 180 9.9E-31 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 YE2573 364856888ab55d10cd7473e543e0ca91 545 Gene3D G3DSA:1.20.120.30 36 179 2.2E-46 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 YE2573 364856888ab55d10cd7473e543e0ca91 545 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 326 513 9.0E-64 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 YE2573 364856888ab55d10cd7473e543e0ca91 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 191 211 1.9E-80 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE2573 364856888ab55d10cd7473e543e0ca91 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 60 75 1.9E-80 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE2573 364856888ab55d10cd7473e543e0ca91 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 288 317 1.9E-80 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE2573 364856888ab55d10cd7473e543e0ca91 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 1.9E-80 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE2573 364856888ab55d10cd7473e543e0ca91 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 442 471 1.9E-80 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE2573 364856888ab55d10cd7473e543e0ca91 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 394 423 1.9E-80 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE2573 364856888ab55d10cd7473e543e0ca91 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 365 392 1.9E-80 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE2573 364856888ab55d10cd7473e543e0ca91 545 SUPERFAMILY SSF47170 25 177 4.97E-41 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 YE2573 364856888ab55d10cd7473e543e0ca91 545 SMART SM00283 267 514 4.6E-102 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 YE2573 364856888ab55d10cd7473e543e0ca91 545 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 292 314 - T 22-04-2016 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site YE2573 364856888ab55d10cd7473e543e0ca91 545 PANTHER PTHR32089 1 517 7.9E-201 T 22-04-2016 YE2573 364856888ab55d10cd7473e543e0ca91 545 SUPERFAMILY SSF58104 234 515 3.53E-76 T 22-04-2016 YE2573 364856888ab55d10cd7473e543e0ca91 545 SMART SM00304 214 266 2.4E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YE2573 364856888ab55d10cd7473e543e0ca91 545 Pfam PF02203 Tar ligand binding domain homologue 1 170 5.1E-50 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 YE2573 364856888ab55d10cd7473e543e0ca91 545 PANTHER PTHR32089:SF48 1 517 7.9E-201 T 22-04-2016 YE1391 6e596a9268574c03f89450145d59cca9 81 SUPERFAMILY SSF54292 5 81 3.54E-19 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YE1391 6e596a9268574c03f89450145d59cca9 81 Gene3D G3DSA:3.10.20.30 1 80 5.4E-18 T 22-04-2016 IPR012675 Beta-grasp domain YE1391 6e596a9268574c03f89450145d59cca9 81 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 6 73 1.3E-9 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YE1391 6e596a9268574c03f89450145d59cca9 81 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 34 42 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 YE2159 0ecd0d8e601f845319d284dc5116afac 312 Pfam PF03466 LysR substrate binding domain 88 291 1.8E-27 T 22-04-2016 IPR005119 LysR, substrate-binding YE2159 0ecd0d8e601f845319d284dc5116afac 312 SUPERFAMILY SSF53850 89 292 1.07E-30 T 22-04-2016 YE2159 0ecd0d8e601f845319d284dc5116afac 312 PANTHER PTHR30126 1 306 1.5E-181 T 22-04-2016 YE2159 0ecd0d8e601f845319d284dc5116afac 312 PANTHER PTHR30126:SF18 1 306 1.5E-181 T 22-04-2016 YE2159 0ecd0d8e601f845319d284dc5116afac 312 Gene3D G3DSA:3.40.190.10 89 173 5.3E-10 T 22-04-2016 YE2159 0ecd0d8e601f845319d284dc5116afac 312 SUPERFAMILY SSF46785 7 88 4.47E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2159 0ecd0d8e601f845319d284dc5116afac 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 4.9E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE2159 0ecd0d8e601f845319d284dc5116afac 312 Gene3D G3DSA:3.40.190.10 174 257 7.6E-6 T 22-04-2016 YE2159 0ecd0d8e601f845319d284dc5116afac 312 Gene3D G3DSA:1.10.10.10 7 88 3.6E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0669 e4f11b48b5c86c9d4ab67395d74da3a4 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 7.5E-160 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 YE0669 e4f11b48b5c86c9d4ab67395d74da3a4 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 1.4E-5 T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 YE0669 e4f11b48b5c86c9d4ab67395d74da3a4 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 YE0669 e4f11b48b5c86c9d4ab67395d74da3a4 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.986 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 YE0669 e4f11b48b5c86c9d4ab67395d74da3a4 360 Pfam PF00953 Glycosyl transferase family 4 99 284 1.1E-35 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 YE0669 e4f11b48b5c86c9d4ab67395d74da3a4 360 PANTHER PTHR22926:SF5 2 360 7.1E-196 T 22-04-2016 YE0669 e4f11b48b5c86c9d4ab67395d74da3a4 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 YE0669 e4f11b48b5c86c9d4ab67395d74da3a4 360 PANTHER PTHR22926 2 360 7.1E-196 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 YE0590 e2b8c14387d4ddc568b9d8a10976b5b9 110 Pfam PF01371 Trp repressor protein 17 103 9.9E-29 T 22-04-2016 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 YE0590 e2b8c14387d4ddc568b9d8a10976b5b9 110 SUPERFAMILY SSF48295 6 104 2.51E-28 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 YE0590 e2b8c14387d4ddc568b9d8a10976b5b9 110 PANTHER PTHR38025:SF1 1 109 3.9E-44 T 22-04-2016 YE0590 e2b8c14387d4ddc568b9d8a10976b5b9 110 Gene3D G3DSA:1.10.1270.10 10 107 6.8E-45 T 22-04-2016 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 YE0590 e2b8c14387d4ddc568b9d8a10976b5b9 110 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 11 101 2.0E-36 T 22-04-2016 IPR013335 Trp repressor, bacterial GO:0006355 YE0590 e2b8c14387d4ddc568b9d8a10976b5b9 110 Hamap MF_00475 Trp operon repressor [trpR]. 15 108 23.336 T 22-04-2016 IPR013335 Trp repressor, bacterial GO:0006355 YE0590 e2b8c14387d4ddc568b9d8a10976b5b9 110 PIRSF PIRSF003196 7 109 1.2E-40 T 22-04-2016 IPR013335 Trp repressor, bacterial GO:0006355 YE0590 e2b8c14387d4ddc568b9d8a10976b5b9 110 TIGRFAM TIGR01321 TrpR: trp operon repressor 12 104 4.0E-35 T 22-04-2016 IPR013335 Trp repressor, bacterial GO:0006355 YE0590 e2b8c14387d4ddc568b9d8a10976b5b9 110 PANTHER PTHR38025 1 109 3.9E-44 T 22-04-2016 YE4171 264cd63df082c5bb0c8daccd9c152b85 361 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 355 1.4E-131 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 YE4171 264cd63df082c5bb0c8daccd9c152b85 361 Gene3D G3DSA:3.40.50.300 230 349 3.8E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE4171 264cd63df082c5bb0c8daccd9c152b85 361 Gene3D G3DSA:3.40.50.300 1 171 3.8E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE4171 264cd63df082c5bb0c8daccd9c152b85 361 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 342 1.5E-39 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal YE4171 264cd63df082c5bb0c8daccd9c152b85 361 ProSitePatterns PS00617 RecF protein signature 1. 117 137 - T 22-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 YE4171 264cd63df082c5bb0c8daccd9c152b85 361 PANTHER PTHR32182 1 356 1.4E-77 T 22-04-2016 YE4171 264cd63df082c5bb0c8daccd9c152b85 361 PANTHER PTHR32182:SF0 1 356 1.4E-77 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 YE4171 264cd63df082c5bb0c8daccd9c152b85 361 ProSitePatterns PS00618 RecF protein signature 2. 298 316 - T 22-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 YE4171 264cd63df082c5bb0c8daccd9c152b85 361 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 361 98.683 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 YE4171 264cd63df082c5bb0c8daccd9c152b85 361 SUPERFAMILY SSF52540 1 340 6.98E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1527 652ff0d5d69e82c08761cef825b7e0b6 447 SUPERFAMILY SSF48019 252 434 5.67E-71 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 YE1527 652ff0d5d69e82c08761cef825b7e0b6 447 Pfam PF12002 MgsA AAA+ ATPase C terminal 268 434 3.2E-64 T 22-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal YE1527 652ff0d5d69e82c08761cef825b7e0b6 447 PANTHER PTHR13779:SF7 10 447 4.2E-195 T 22-04-2016 YE1527 652ff0d5d69e82c08761cef825b7e0b6 447 Gene3D G3DSA:1.20.272.10 249 347 1.5E-42 T 22-04-2016 YE1527 652ff0d5d69e82c08761cef825b7e0b6 447 Gene3D G3DSA:3.40.50.300 10 152 1.5E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1527 652ff0d5d69e82c08761cef825b7e0b6 447 SMART SM00382 49 165 4.6E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain YE1527 652ff0d5d69e82c08761cef825b7e0b6 447 Gene3D G3DSA:1.10.8.60 153 229 7.1E-7 T 22-04-2016 YE1527 652ff0d5d69e82c08761cef825b7e0b6 447 SUPERFAMILY SSF52540 6 234 3.68E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1527 652ff0d5d69e82c08761cef825b7e0b6 447 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 159 7.0E-15 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 YE1527 652ff0d5d69e82c08761cef825b7e0b6 447 Pfam PF16193 AAA C-terminal domain 188 267 7.0E-21 T 22-04-2016 IPR032423 AAA ATPase, C-terminal domain YE1527 652ff0d5d69e82c08761cef825b7e0b6 447 Gene3D G3DSA:1.10.3710.10 348 444 1.2E-32 T 22-04-2016 YE1527 652ff0d5d69e82c08761cef825b7e0b6 447 PANTHER PTHR13779 10 447 4.2E-195 T 22-04-2016 YE1625 d2471e9ba0be660c2205bf5e86daf2f3 348 Gene3D G3DSA:3.20.20.140 6 347 1.4E-133 T 22-04-2016 YE1625 d2471e9ba0be660c2205bf5e86daf2f3 348 Pfam PF01979 Amidohydrolase family 15 307 8.0E-20 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 YE1625 d2471e9ba0be660c2205bf5e86daf2f3 348 ProSitePatterns PS00483 Dihydroorotase signature 2. 249 260 - T 22-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 YE1625 d2471e9ba0be660c2205bf5e86daf2f3 348 PANTHER PTHR11647 6 334 5.1E-156 T 22-04-2016 YE1625 d2471e9ba0be660c2205bf5e86daf2f3 348 SUPERFAMILY SSF51556 6 347 8.41E-148 T 22-04-2016 IPR032466 Metal-dependent hydrolase YE1625 d2471e9ba0be660c2205bf5e86daf2f3 348 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 8 347 3.7E-152 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 YE1625 d2471e9ba0be660c2205bf5e86daf2f3 348 PIRSF PIRSF001237 4 348 6.3E-143 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 YE1625 d2471e9ba0be660c2205bf5e86daf2f3 348 Hamap MF_00219 Dihydroorotase [pyrC]. 6 347 54.729 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 YE1625 d2471e9ba0be660c2205bf5e86daf2f3 348 PANTHER PTHR11647:SF59 6 334 5.1E-156 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 YE4131 e9070ede3ba3ae6f65ee6c12be17747d 462 Gene3D G3DSA:3.40.640.10 73 319 5.2E-31 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YE4131 e9070ede3ba3ae6f65ee6c12be17747d 462 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 462 243.369 T 22-04-2016 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 YE4131 e9070ede3ba3ae6f65ee6c12be17747d 462 PANTHER PTHR32328 2 453 2.2E-246 T 22-04-2016 YE4131 e9070ede3ba3ae6f65ee6c12be17747d 462 SUPERFAMILY SSF53383 72 344 4.34E-43 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YE4131 e9070ede3ba3ae6f65ee6c12be17747d 462 Pfam PF12390 Selenocysteine synthase N terminal 9 48 2.6E-8 T 22-04-2016 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 YE4131 e9070ede3ba3ae6f65ee6c12be17747d 462 Pfam PF03841 L-seryl-tRNA selenium transferase 82 450 2.5E-168 T 22-04-2016 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 YE4131 e9070ede3ba3ae6f65ee6c12be17747d 462 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 10 456 2.1E-181 T 22-04-2016 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 YE4131 e9070ede3ba3ae6f65ee6c12be17747d 462 PANTHER PTHR32328:SF0 2 453 2.2E-246 T 22-04-2016 YE0027 78bc5bbf6873b0d6949ac878a251440b 469 SUPERFAMILY SSF55931 102 468 3.63E-137 T 22-04-2016 YE0027 78bc5bbf6873b0d6949ac878a251440b 469 SUPERFAMILY SSF54368 3 99 2.22E-36 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 YE0027 78bc5bbf6873b0d6949ac878a251440b 469 PANTHER PTHR20852:SF15 1 138 9.1E-275 T 22-04-2016 YE0027 78bc5bbf6873b0d6949ac878a251440b 469 PANTHER PTHR20852:SF15 160 469 9.1E-275 T 22-04-2016 YE0027 78bc5bbf6873b0d6949ac878a251440b 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 22-04-2016 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 YE0027 78bc5bbf6873b0d6949ac878a251440b 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 22-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 YE0027 78bc5bbf6873b0d6949ac878a251440b 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 22-04-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 YE0027 78bc5bbf6873b0d6949ac878a251440b 469 PANTHER PTHR20852 1 138 9.1E-275 T 22-04-2016 YE0027 78bc5bbf6873b0d6949ac878a251440b 469 PANTHER PTHR20852 160 469 9.1E-275 T 22-04-2016 YE0027 78bc5bbf6873b0d6949ac878a251440b 469 Gene3D G3DSA:3.30.590.10 106 455 1.1E-139 T 22-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 YE0027 78bc5bbf6873b0d6949ac878a251440b 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 4.1E-137 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 YE0027 78bc5bbf6873b0d6949ac878a251440b 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 1.2E-214 T 22-04-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 YE0027 78bc5bbf6873b0d6949ac878a251440b 469 Gene3D G3DSA:3.10.20.70 3 105 8.5E-40 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 YE0027 78bc5bbf6873b0d6949ac878a251440b 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 4.8E-32 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 YE0027 78bc5bbf6873b0d6949ac878a251440b 469 SMART SM01230 102 379 1.2E-147 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 YE2651 67c3529fa079ff05b89f3229c59a4315 298 Gene3D G3DSA:3.20.20.60 6 242 4.6E-72 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YE2651 67c3529fa079ff05b89f3229c59a4315 298 PIRSF PIRSF015582 2 297 3.0E-75 T 22-04-2016 IPR011206 Citrate lyase beta subunit-like YE2651 67c3529fa079ff05b89f3229c59a4315 298 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 12 231 6.7E-80 T 22-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 YE2651 67c3529fa079ff05b89f3229c59a4315 298 PANTHER PTHR32308 2 291 3.1E-107 T 22-04-2016 IPR011206 Citrate lyase beta subunit-like YE2651 67c3529fa079ff05b89f3229c59a4315 298 PANTHER PTHR32308:SF0 2 291 3.1E-107 T 22-04-2016 YE2651 67c3529fa079ff05b89f3229c59a4315 298 SUPERFAMILY SSF51621 8 241 5.93E-61 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YE1597 19813d189b5b600d56132a0860f5f247 108 Pfam PF04358 DsrC like protein 2 108 1.1E-47 T 22-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE YE1597 19813d189b5b600d56132a0860f5f247 108 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 1 108 1.4E-51 T 22-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE YE1597 19813d189b5b600d56132a0860f5f247 108 PIRSF PIRSF006223 1 108 4.2E-48 T 22-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE YE1597 19813d189b5b600d56132a0860f5f247 108 Gene3D G3DSA:3.30.1420.10 1 38 6.6E-16 T 22-04-2016 YE1597 19813d189b5b600d56132a0860f5f247 108 SUPERFAMILY SSF69721 2 108 1.16E-42 T 22-04-2016 IPR025526 DsrC-like domain YE1597 19813d189b5b600d56132a0860f5f247 108 Gene3D G3DSA:1.10.10.370 39 108 9.3E-39 T 22-04-2016 YE1597 19813d189b5b600d56132a0860f5f247 108 PANTHER PTHR37010 1 108 3.2E-64 T 22-04-2016 YE1597 19813d189b5b600d56132a0860f5f247 108 PANTHER PTHR37010:SF1 1 108 3.2E-64 T 22-04-2016 YE4188 a2ed0fdde4d1ea28a79baac8757630d0 442 PANTHER PTHR11119:SF9 5 429 1.7E-182 T 22-04-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 YE4188 a2ed0fdde4d1ea28a79baac8757630d0 442 PIRSF PIRSF005353 3 442 1.8E-178 T 22-04-2016 IPR026033 Purine permease PbuG-like YE4188 a2ed0fdde4d1ea28a79baac8757630d0 442 PANTHER PTHR11119 5 429 1.7E-182 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 YE4188 a2ed0fdde4d1ea28a79baac8757630d0 442 Pfam PF00860 Permease family 29 402 2.7E-44 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 YE3126 6d537d50f642663920a81c686cde2c1c 567 Gene3D G3DSA:3.90.76.10 133 274 2.9E-21 T 22-04-2016 YE3126 6d537d50f642663920a81c686cde2c1c 567 Pfam PF12793 Sugar transport-related sRNA regulator N-term 6 118 4.1E-38 T 22-04-2016 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain YE3126 6d537d50f642663920a81c686cde2c1c 567 PANTHER PTHR30290:SF19 120 563 1.3E-291 T 22-04-2016 YE3126 6d537d50f642663920a81c686cde2c1c 567 PANTHER PTHR30290:SF19 22 81 1.3E-291 T 22-04-2016 YE3126 6d537d50f642663920a81c686cde2c1c 567 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 165 351 4.9E-17 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain YE3126 6d537d50f642663920a81c686cde2c1c 567 SUPERFAMILY SSF53850 114 562 2.9E-53 T 22-04-2016 YE3126 6d537d50f642663920a81c686cde2c1c 567 PANTHER PTHR30290 120 563 1.3E-291 T 22-04-2016 YE3126 6d537d50f642663920a81c686cde2c1c 567 PANTHER PTHR30290 22 81 1.3E-291 T 22-04-2016 YE1193 9e100786a0170d0bdce295384b59ca98 490 PANTHER PTHR23508 2 220 0.0 T 22-04-2016 YE1193 9e100786a0170d0bdce295384b59ca98 490 PANTHER PTHR23508 263 475 0.0 T 22-04-2016 YE1193 9e100786a0170d0bdce295384b59ca98 490 PANTHER PTHR23508:SF3 2 220 0.0 T 22-04-2016 YE1193 9e100786a0170d0bdce295384b59ca98 490 PANTHER PTHR23508:SF3 263 475 0.0 T 22-04-2016 YE1193 9e100786a0170d0bdce295384b59ca98 490 Pfam PF07690 Major Facilitator Superfamily 278 448 1.7E-12 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YE1193 9e100786a0170d0bdce295384b59ca98 490 Pfam PF07690 Major Facilitator Superfamily 19 246 1.6E-27 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YE1193 9e100786a0170d0bdce295384b59ca98 490 SUPERFAMILY SSF103473 271 454 1.48E-65 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE1193 9e100786a0170d0bdce295384b59ca98 490 SUPERFAMILY SSF103473 11 202 1.48E-65 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE1193 9e100786a0170d0bdce295384b59ca98 490 Gene3D G3DSA:1.20.1250.20 10 198 2.5E-37 T 22-04-2016 YE1193 9e100786a0170d0bdce295384b59ca98 490 Gene3D G3DSA:1.20.1250.20 270 447 2.8E-17 T 22-04-2016 YE0035 aa639c4c7753b8b64894bc4a828d56f0 228 Pfam PF08448 PAS fold 18 125 6.8E-7 T 22-04-2016 IPR013656 PAS fold-4 YE0035 aa639c4c7753b8b64894bc4a828d56f0 228 SUPERFAMILY SSF46894 138 210 1.84E-15 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YE0035 aa639c4c7753b8b64894bc4a828d56f0 228 Gene3D G3DSA:1.10.10.10 146 210 2.5E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0035 aa639c4c7753b8b64894bc4a828d56f0 228 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 204 4.2E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE0035 aa639c4c7753b8b64894bc4a828d56f0 228 SMART SM00421 148 205 2.6E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE2377 2a3d0c201020d8dfb05916556e4ebb07 232 PANTHER PTHR11735 1 141 1.9E-61 T 22-04-2016 YE2377 2a3d0c201020d8dfb05916556e4ebb07 232 Gene3D G3DSA:3.30.420.40 4 135 2.2E-44 T 22-04-2016 YE2377 2a3d0c201020d8dfb05916556e4ebb07 232 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 5 221 2.4E-67 T 22-04-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 YE2377 2a3d0c201020d8dfb05916556e4ebb07 232 PANTHER PTHR11735:SF11 1 141 1.9E-61 T 22-04-2016 YE2377 2a3d0c201020d8dfb05916556e4ebb07 232 Pfam PF00814 Glycoprotease family 30 152 9.4E-29 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 YE2377 2a3d0c201020d8dfb05916556e4ebb07 232 SUPERFAMILY SSF53067 5 105 8.63E-30 T 22-04-2016 YE2377 2a3d0c201020d8dfb05916556e4ebb07 232 SUPERFAMILY SSF53067 110 219 1.81E-28 T 22-04-2016 YE3902 4d06cdcbdaa96a508fb6a347610bdc61 38 SUPERFAMILY SSF57840 1 38 5.49E-17 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3902 4d06cdcbdaa96a508fb6a347610bdc61 38 PANTHER PTHR18804 1 38 4.0E-19 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3902 4d06cdcbdaa96a508fb6a347610bdc61 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3902 4d06cdcbdaa96a508fb6a347610bdc61 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 4.7E-22 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3902 4d06cdcbdaa96a508fb6a347610bdc61 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 38 4.0E-10 T 22-04-2016 YE3902 4d06cdcbdaa96a508fb6a347610bdc61 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 17.971 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3902 4d06cdcbdaa96a508fb6a347610bdc61 38 Pfam PF00444 Ribosomal protein L36 1 38 1.6E-20 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE1516 13ede1d38833a3e5dff004512f30282d 85 SUPERFAMILY SSF50249 1 66 6.61E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE1516 13ede1d38833a3e5dff004512f30282d 85 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 66 2.1E-41 T 22-04-2016 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355|GO:0006950 YE1516 13ede1d38833a3e5dff004512f30282d 85 Pfam PF00313 'Cold-shock' DNA-binding domain 3 64 1.6E-28 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YE1516 13ede1d38833a3e5dff004512f30282d 85 PANTHER PTHR11544 1 72 1.4E-46 T 22-04-2016 YE1516 13ede1d38833a3e5dff004512f30282d 85 SMART SM00357 3 67 2.4E-28 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 YE1516 13ede1d38833a3e5dff004512f30282d 85 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 22-04-2016 IPR019844 Cold-shock conserved site YE1516 13ede1d38833a3e5dff004512f30282d 85 Gene3D G3DSA:2.40.50.140 1 64 4.4E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE1516 13ede1d38833a3e5dff004512f30282d 85 PRINTS PR00050 Cold shock protein signature 25 34 1.2E-15 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YE1516 13ede1d38833a3e5dff004512f30282d 85 PRINTS PR00050 Cold shock protein signature 4 19 1.2E-15 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YE1516 13ede1d38833a3e5dff004512f30282d 85 PRINTS PR00050 Cold shock protein signature 40 58 1.2E-15 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YE1516 13ede1d38833a3e5dff004512f30282d 85 PANTHER PTHR11544:SF52 1 72 1.4E-46 T 22-04-2016 YE2221 276e174ea8a23c846873ffd4f56e010c 156 SUPERFAMILY SSF54637 21 146 4.73E-39 T 22-04-2016 IPR029069 HotDog domain YE2221 276e174ea8a23c846873ffd4f56e010c 156 Gene3D G3DSA:3.10.129.10 19 145 4.3E-42 T 22-04-2016 IPR029069 HotDog domain YE2221 276e174ea8a23c846873ffd4f56e010c 156 PANTHER PTHR11049 18 151 1.4E-76 T 22-04-2016 YE2221 276e174ea8a23c846873ffd4f56e010c 156 PANTHER PTHR11049:SF5 18 151 1.4E-76 T 22-04-2016 YE2221 276e174ea8a23c846873ffd4f56e010c 156 Pfam PF03061 Thioesterase superfamily 40 111 1.3E-18 T 22-04-2016 IPR006683 Thioesterase domain YE4210 6e5aacf3590a4cee0fdcf7df23706320 156 PANTHER PTHR33445 1 156 5.0E-48 T 22-04-2016 YE4210 6e5aacf3590a4cee0fdcf7df23706320 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 156 13.254 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 YE4210 6e5aacf3590a4cee0fdcf7df23706320 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 1.0E-38 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 YE4210 6e5aacf3590a4cee0fdcf7df23706320 156 Gene3D G3DSA:1.20.5.620 62 122 2.4E-25 T 22-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain YE4210 6e5aacf3590a4cee0fdcf7df23706320 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 9.2E-60 T 22-04-2016 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 YE4210 6e5aacf3590a4cee0fdcf7df23706320 156 SUPERFAMILY SSF81573 63 121 4.58E-15 T 22-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain YE2232 d63db3006c8f066d86647e9338d91789 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 3.4E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE2232 d63db3006c8f066d86647e9338d91789 306 PANTHER PTHR30465 1 306 4.3E-164 T 22-04-2016 YE2232 d63db3006c8f066d86647e9338d91789 306 SUPERFAMILY SSF161098 92 291 3.6E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE2232 d63db3006c8f066d86647e9338d91789 306 PANTHER PTHR30465:SF74 1 306 4.3E-164 T 22-04-2016 YE2232 d63db3006c8f066d86647e9338d91789 306 Gene3D G3DSA:1.10.3720.10 90 302 3.2E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE3312 5946ba9ead2599f1076749039a77c568 1123 SUPERFAMILY SSF52980 819 1121 8.58E-98 T 22-04-2016 IPR011335 Restriction endonuclease type II-like YE3312 5946ba9ead2599f1076749039a77c568 1123 SUPERFAMILY SSF52540 1 347 4.83E-126 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3312 5946ba9ead2599f1076749039a77c568 1123 Gene3D G3DSA:1.10.10.160 86 184 5.6E-32 T 22-04-2016 IPR013986 DExx box DNA helicase domain YE3312 5946ba9ead2599f1076749039a77c568 1123 PANTHER PTHR30591 1 1106 0.0 T 22-04-2016 YE3312 5946ba9ead2599f1076749039a77c568 1123 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1123 13.662 T 22-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 YE3312 5946ba9ead2599f1076749039a77c568 1123 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1088 0.0 T 22-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 YE3312 5946ba9ead2599f1076749039a77c568 1123 PIRSF PIRSF000980 1 1123 0.0 T 22-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 YE3312 5946ba9ead2599f1076749039a77c568 1123 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 1 807 2.0E-299 T 22-04-2016 YE3312 5946ba9ead2599f1076749039a77c568 1123 PANTHER PTHR30591:SF1 1 1106 0.0 T 22-04-2016 YE3312 5946ba9ead2599f1076749039a77c568 1123 SUPERFAMILY SSF52540 370 811 1.42E-105 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3312 5946ba9ead2599f1076749039a77c568 1123 Gene3D G3DSA:3.40.50.300 657 752 9.5E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3312 5946ba9ead2599f1076749039a77c568 1123 Gene3D G3DSA:3.40.50.300 370 455 9.5E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0639 b4a37e4993de55b02673eeba95b12e7e 256 PANTHER PTHR30353 1 255 9.1E-182 T 22-04-2016 IPR032818 DedA family YE0639 b4a37e4993de55b02673eeba95b12e7e 256 Pfam PF09335 SNARE associated Golgi protein 36 159 3.6E-20 T 22-04-2016 IPR032816 SNARE associated Golgi protein YE0639 b4a37e4993de55b02673eeba95b12e7e 256 PANTHER PTHR30353:SF7 1 255 9.1E-182 T 22-04-2016 YE0811 df64cafa6b9beabf4995d015d799608b 276 PANTHER PTHR32502 1 276 3.1E-133 T 22-04-2016 YE0811 df64cafa6b9beabf4995d015d799608b 276 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 8 275 1.4E-104 T 22-04-2016 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 YE0811 df64cafa6b9beabf4995d015d799608b 276 PANTHER PTHR32502:SF9 1 276 3.1E-133 T 22-04-2016 YE0811 df64cafa6b9beabf4995d015d799608b 276 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 6 275 2.7E-136 T 22-04-2016 IPR018405 Phosphotransferase system, mannose/fructose/sorbose family IID component, subgroup GO:0009401|GO:0016021 YE4146 0e090e9122f823923902d18607ac0fac 184 Gene3D G3DSA:1.20.120.330 2 171 9.0E-80 T 22-04-2016 YE4146 0e090e9122f823923902d18607ac0fac 184 PANTHER PTHR37941 1 182 5.5E-56 T 22-04-2016 YE4146 0e090e9122f823923902d18607ac0fac 184 SUPERFAMILY SSF158668 6 170 2.49E-58 T 22-04-2016 YE4146 0e090e9122f823923902d18607ac0fac 184 Pfam PF05068 Mannitol repressor 9 170 7.9E-64 T 22-04-2016 IPR007761 Mannitol repressor YE3277 3f9d93e4a67ed1267149088739b18ff1 451 PANTHER PTHR22939 1 451 7.6E-105 T 22-04-2016 YE3277 3f9d93e4a67ed1267149088739b18ff1 451 PANTHER PTHR22939:SF78 1 451 7.6E-105 T 22-04-2016 YE3277 3f9d93e4a67ed1267149088739b18ff1 451 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 2 451 1.0E-160 T 22-04-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 YE3277 3f9d93e4a67ed1267149088739b18ff1 451 SUPERFAMILY SSF50156 86 181 5.78E-12 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YE3277 3f9d93e4a67ed1267149088739b18ff1 451 Pfam PF02163 Peptidase family M50 10 439 3.4E-88 T 22-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 YE3277 3f9d93e4a67ed1267149088739b18ff1 451 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 223 258 2.8E-7 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YE3277 3f9d93e4a67ed1267149088739b18ff1 451 SMART SM00228 115 186 0.12 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YE3277 3f9d93e4a67ed1267149088739b18ff1 451 SMART SM00228 211 280 1.1E-8 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YE3277 3f9d93e4a67ed1267149088739b18ff1 451 SUPERFAMILY SSF50156 194 290 2.76E-16 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YE3277 3f9d93e4a67ed1267149088739b18ff1 451 Gene3D G3DSA:2.30.42.10 96 176 8.9E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YE3277 3f9d93e4a67ed1267149088739b18ff1 451 Gene3D G3DSA:2.30.42.10 214 289 2.0E-16 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YE2607 5bfee9d36962ae5cbede25d913b18e65 338 Pfam PF02653 Branched-chain amino acid transport system / permease component 55 327 1.7E-29 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YE2607 5bfee9d36962ae5cbede25d913b18e65 338 PANTHER PTHR32196:SF21 23 334 1.0E-37 T 22-04-2016 YE2607 5bfee9d36962ae5cbede25d913b18e65 338 PANTHER PTHR32196 23 334 1.0E-37 T 22-04-2016 YE3688 fc924d4b3fdbf1275499037822cd5e27 286 SUPERFAMILY SSF53697 110 274 2.43E-34 T 22-04-2016 YE3688 fc924d4b3fdbf1275499037822cd5e27 286 PANTHER PTHR30514:SF4 1 286 5.7E-67 T 22-04-2016 YE3688 fc924d4b3fdbf1275499037822cd5e27 286 Gene3D G3DSA:1.10.10.10 1 77 3.7E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3688 fc924d4b3fdbf1275499037822cd5e27 286 PANTHER PTHR30514 1 286 5.7E-67 T 22-04-2016 YE3688 fc924d4b3fdbf1275499037822cd5e27 286 SUPERFAMILY SSF46689 1 77 3.23E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE3688 fc924d4b3fdbf1275499037822cd5e27 286 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 2.7E-21 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 YE3688 fc924d4b3fdbf1275499037822cd5e27 286 Pfam PF01380 SIS domain 132 260 7.6E-19 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 YE3688 fc924d4b3fdbf1275499037822cd5e27 286 Gene3D G3DSA:3.40.50.10490 112 274 1.7E-33 T 22-04-2016 YE2869 1e6d224dbd89f8949e1eb005314645b0 232 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 2 232 9.4E-106 T 22-04-2016 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE YE2869 1e6d224dbd89f8949e1eb005314645b0 232 PANTHER PTHR24220 3 232 1.9E-136 T 22-04-2016 YE2869 1e6d224dbd89f8949e1eb005314645b0 232 SUPERFAMILY SSF52540 2 219 1.3E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2869 1e6d224dbd89f8949e1eb005314645b0 232 PANTHER PTHR24220:SF404 3 232 1.9E-136 T 22-04-2016 YE2869 1e6d224dbd89f8949e1eb005314645b0 232 Pfam PF00005 ABC transporter 17 161 5.3E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE2869 1e6d224dbd89f8949e1eb005314645b0 232 SMART SM00382 26 211 4.0E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain YE2869 1e6d224dbd89f8949e1eb005314645b0 232 Gene3D G3DSA:3.40.50.300 1 220 8.3E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0619 d4fc508ff6ce32c435841b5fc28b8856 317 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 287 36.761 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 YE0619 d4fc508ff6ce32c435841b5fc28b8856 317 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 285 9.5E-100 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 YE0619 d4fc508ff6ce32c435841b5fc28b8856 317 Pfam PF02401 LytB protein 3 283 8.3E-93 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 YE0619 d4fc508ff6ce32c435841b5fc28b8856 317 PANTHER PTHR30426 1 317 3.6E-161 T 22-04-2016 YE4093 698ae3c2d1ab702039e0313c97144a91 465 Pfam PF00324 Amino acid permease 16 452 1.8E-110 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 YE4093 698ae3c2d1ab702039e0313c97144a91 465 PANTHER PTHR11785 1 452 2.4E-279 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YE4093 698ae3c2d1ab702039e0313c97144a91 465 PIRSF PIRSF006060 1 465 4.6E-74 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YE4093 698ae3c2d1ab702039e0313c97144a91 465 ProSitePatterns PS00218 Amino acid permeases signature. 41 71 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 YE4093 698ae3c2d1ab702039e0313c97144a91 465 PANTHER PTHR11785:SF351 1 452 2.4E-279 T 22-04-2016 YE0451 b34de2e4c2f6cd8208b61e20abebe646 173 PIRSF PIRSF025550 1 173 1.2E-82 T 22-04-2016 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT YE0451 b34de2e4c2f6cd8208b61e20abebe646 173 PANTHER PTHR10094 1 144 8.2E-75 T 22-04-2016 YE0451 b34de2e4c2f6cd8208b61e20abebe646 173 PANTHER PTHR10094:SF16 1 144 8.2E-75 T 22-04-2016 YE0451 b34de2e4c2f6cd8208b61e20abebe646 173 Pfam PF02036 SCP-2 sterol transfer family 46 133 1.3E-19 T 22-04-2016 IPR003033 SCP2 sterol-binding domain YE0451 b34de2e4c2f6cd8208b61e20abebe646 173 Gene3D G3DSA:3.30.1050.10 60 135 4.0E-13 T 22-04-2016 IPR003033 SCP2 sterol-binding domain YE0451 b34de2e4c2f6cd8208b61e20abebe646 173 SUPERFAMILY SSF55718 42 137 8.71E-23 T 22-04-2016 IPR003033 SCP2 sterol-binding domain YE3248 cac1db1f379904bab3e3abc6dd5cedf0 452 SMART SM00155 353 380 0.0025 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 YE3248 cac1db1f379904bab3e3abc6dd5cedf0 452 SMART SM00155 134 160 0.0072 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 YE3248 cac1db1f379904bab3e3abc6dd5cedf0 452 Gene3D G3DSA:3.30.870.10 27 165 9.6E-15 T 22-04-2016 YE3248 cac1db1f379904bab3e3abc6dd5cedf0 452 Gene3D G3DSA:3.30.870.10 252 395 1.1E-14 T 22-04-2016 YE3248 cac1db1f379904bab3e3abc6dd5cedf0 452 PIRSF PIRSF000850 1 452 8.5E-257 T 22-04-2016 IPR016270 Phospholipase D, phosphatidylserine synthase type GO:0008654|GO:0016780 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 YE3248 cac1db1f379904bab3e3abc6dd5cedf0 452 Pfam PF13091 PLD-like domain 258 402 2.2E-22 T 22-04-2016 IPR025202 Phospholipase D-like domain YE3248 cac1db1f379904bab3e3abc6dd5cedf0 452 SUPERFAMILY SSF56024 253 394 1.04E-18 T 22-04-2016 YE3248 cac1db1f379904bab3e3abc6dd5cedf0 452 PANTHER PTHR12586 1 451 8.3E-276 T 22-04-2016 IPR016270 Phospholipase D, phosphatidylserine synthase type GO:0008654|GO:0016780 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 YE3248 cac1db1f379904bab3e3abc6dd5cedf0 452 SUPERFAMILY SSF56024 11 210 3.08E-26 T 22-04-2016 YE3248 cac1db1f379904bab3e3abc6dd5cedf0 452 PANTHER PTHR12586:SF3 1 451 8.3E-276 T 22-04-2016 YE2716 c6c884f699b1e4ff7682643c5f8a0fed 264 Pfam PF06180 Cobalt chelatase (CbiK) 3 256 7.9E-95 T 22-04-2016 IPR010388 Anaerobic cobalt chelatase GO:0016852|GO:0019251 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 YE2716 c6c884f699b1e4ff7682643c5f8a0fed 264 PIRSF PIRSF033579 1 264 2.4E-99 T 22-04-2016 IPR010388 Anaerobic cobalt chelatase GO:0016852|GO:0019251 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 YE2716 c6c884f699b1e4ff7682643c5f8a0fed 264 SUPERFAMILY SSF53800 2 256 1.83E-80 T 22-04-2016 YE2716 c6c884f699b1e4ff7682643c5f8a0fed 264 Gene3D G3DSA:3.40.50.1400 1 150 1.6E-40 T 22-04-2016 YE2716 c6c884f699b1e4ff7682643c5f8a0fed 264 Gene3D G3DSA:3.40.50.1400 151 241 1.5E-22 T 22-04-2016 YE0820 b16a50e6b963a1ca28a10dc39aa0f26f 507 ProSitePatterns PS00211 ABC transporters family signature. 407 421 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE0820 b16a50e6b963a1ca28a10dc39aa0f26f 507 PANTHER PTHR24220 10 389 1.0E-179 T 22-04-2016 YE0820 b16a50e6b963a1ca28a10dc39aa0f26f 507 SUPERFAMILY SSF52540 260 491 4.59E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0820 b16a50e6b963a1ca28a10dc39aa0f26f 507 Gene3D G3DSA:3.40.50.300 260 493 3.3E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0820 b16a50e6b963a1ca28a10dc39aa0f26f 507 SMART SM00382 287 483 8.3E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain YE0820 b16a50e6b963a1ca28a10dc39aa0f26f 507 SMART SM00382 33 222 2.6E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain YE0820 b16a50e6b963a1ca28a10dc39aa0f26f 507 Gene3D G3DSA:3.40.50.300 8 232 8.6E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0820 b16a50e6b963a1ca28a10dc39aa0f26f 507 PANTHER PTHR24220:SF308 10 389 1.0E-179 T 22-04-2016 YE0820 b16a50e6b963a1ca28a10dc39aa0f26f 507 SUPERFAMILY SSF52540 8 231 1.33E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0820 b16a50e6b963a1ca28a10dc39aa0f26f 507 Pfam PF00005 ABC transporter 24 174 2.6E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE0820 b16a50e6b963a1ca28a10dc39aa0f26f 507 Pfam PF00005 ABC transporter 279 434 1.5E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE1601 00fe56197f5347743401d3473755ae19 310 SUPERFAMILY SSF103481 203 305 1.07E-11 T 22-04-2016 YE1601 00fe56197f5347743401d3473755ae19 310 SUPERFAMILY SSF103481 55 160 7.59E-15 T 22-04-2016 YE1601 00fe56197f5347743401d3473755ae19 310 Pfam PF00892 EamA-like transporter family 16 157 1.1E-17 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YE1601 00fe56197f5347743401d3473755ae19 310 Pfam PF00892 EamA-like transporter family 169 303 2.7E-16 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YE1601 00fe56197f5347743401d3473755ae19 310 PANTHER PTHR32322 3 309 3.2E-76 T 22-04-2016 YE1601 00fe56197f5347743401d3473755ae19 310 PANTHER PTHR32322:SF9 3 309 3.2E-76 T 22-04-2016 YE3935 34feb6a07ee93cec1a18153d2a665eab 271 SUPERFAMILY SSF54534 43 250 1.53E-65 T 22-04-2016 YE3935 34feb6a07ee93cec1a18153d2a665eab 271 Gene3D G3DSA:3.10.50.40 137 250 4.0E-45 T 22-04-2016 YE3935 34feb6a07ee93cec1a18153d2a665eab 271 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 33 153 3.8E-37 T 22-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 YE3935 34feb6a07ee93cec1a18153d2a665eab 271 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 161 247 1.5E-29 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 YE3935 34feb6a07ee93cec1a18153d2a665eab 271 Gene3D G3DSA:1.10.287.460 33 136 2.4E-42 T 22-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 YE3935 34feb6a07ee93cec1a18153d2a665eab 271 PANTHER PTHR10516 132 253 3.2E-51 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type YE4046 f75b108344fb1dd1ed8aa8163bfdee80 441 Pfam PF00375 Sodium:dicarboxylate symporter family 6 402 2.8E-106 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YE4046 f75b108344fb1dd1ed8aa8163bfdee80 441 PRINTS PR00173 Glutamate-aspartate symporter signature 356 376 1.4E-40 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YE4046 f75b108344fb1dd1ed8aa8163bfdee80 441 PRINTS PR00173 Glutamate-aspartate symporter signature 80 105 1.4E-40 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YE4046 f75b108344fb1dd1ed8aa8163bfdee80 441 PRINTS PR00173 Glutamate-aspartate symporter signature 194 213 1.4E-40 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YE4046 f75b108344fb1dd1ed8aa8163bfdee80 441 PRINTS PR00173 Glutamate-aspartate symporter signature 50 70 1.4E-40 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YE4046 f75b108344fb1dd1ed8aa8163bfdee80 441 PRINTS PR00173 Glutamate-aspartate symporter signature 294 320 1.4E-40 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YE4046 f75b108344fb1dd1ed8aa8163bfdee80 441 PRINTS PR00173 Glutamate-aspartate symporter signature 147 169 1.4E-40 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YE4046 f75b108344fb1dd1ed8aa8163bfdee80 441 PRINTS PR00173 Glutamate-aspartate symporter signature 4 24 1.4E-40 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YE4046 f75b108344fb1dd1ed8aa8163bfdee80 441 PRINTS PR00173 Glutamate-aspartate symporter signature 329 348 1.4E-40 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YE4046 f75b108344fb1dd1ed8aa8163bfdee80 441 PANTHER PTHR11958 1 405 6.0E-150 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YE4046 f75b108344fb1dd1ed8aa8163bfdee80 441 PANTHER PTHR11958:SF26 1 405 6.0E-150 T 22-04-2016 IPR033380 Glutamate-aspartate symport protein GltP/GltT GO:0015293|GO:0015810|GO:0015813|GO:0016021 YE4046 f75b108344fb1dd1ed8aa8163bfdee80 441 Gene3D G3DSA:1.10.3860.10 1 405 1.5E-110 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YE4046 f75b108344fb1dd1ed8aa8163bfdee80 441 SUPERFAMILY SSF118215 6 403 2.48E-108 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YE3252 85e9b1e57acb68ca036f852d08c75109 188 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 6 181 3.9E-93 T 22-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 YE3252 85e9b1e57acb68ca036f852d08c75109 188 PIRSF PIRSF004682 1 188 2.0E-66 T 22-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 YE3252 85e9b1e57acb68ca036f852d08c75109 188 PANTHER PTHR23133 6 185 1.2E-72 T 22-04-2016 YE3252 85e9b1e57acb68ca036f852d08c75109 188 PANTHER PTHR23133:SF3 6 185 1.2E-72 T 22-04-2016 YE3252 85e9b1e57acb68ca036f852d08c75109 188 SUPERFAMILY SSF56784 3 183 5.79E-53 T 22-04-2016 IPR023214 HAD-like domain YE3252 85e9b1e57acb68ca036f852d08c75109 188 Pfam PF13242 HAD-hyrolase-like 109 179 1.5E-11 T 22-04-2016 YE3252 85e9b1e57acb68ca036f852d08c75109 188 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 7 153 4.5E-38 T 22-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA YE3252 85e9b1e57acb68ca036f852d08c75109 188 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 154 2.1E-40 T 22-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 YE3252 85e9b1e57acb68ca036f852d08c75109 188 Gene3D G3DSA:3.40.50.1000 3 183 7.4E-62 T 22-04-2016 IPR023214 HAD-like domain YE3270 16e7660bd4d594e75886427d8a09af2e 198 SUPERFAMILY SSF53098 5 196 2.28E-69 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE3270 16e7660bd4d594e75886427d8a09af2e 198 Hamap MF_00052_B Ribonuclease HII [rnhB]. 12 191 39.656 T 22-04-2016 IPR022898 Ribonuclease HII GO:0004523 YE3270 16e7660bd4d594e75886427d8a09af2e 198 Pfam PF01351 Ribonuclease HII 14 189 2.0E-39 T 22-04-2016 IPR024567 Ribonuclease HII/HIII domain YE3270 16e7660bd4d594e75886427d8a09af2e 198 Gene3D G3DSA:3.30.420.10 12 152 1.3E-47 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE3270 16e7660bd4d594e75886427d8a09af2e 198 PANTHER PTHR10954 3 198 5.4E-82 T 22-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 YE1363 b227b931158e33bffb160c1f03c4ff24 254 PANTHER PTHR24322:SF459 14 142 4.3E-57 T 22-04-2016 YE1363 b227b931158e33bffb160c1f03c4ff24 254 PANTHER PTHR24322:SF459 158 190 4.3E-57 T 22-04-2016 YE1363 b227b931158e33bffb160c1f03c4ff24 254 Gene3D G3DSA:3.40.50.720 4 252 9.3E-83 T 22-04-2016 IPR016040 NAD(P)-binding domain YE1363 b227b931158e33bffb160c1f03c4ff24 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YE1363 b227b931158e33bffb160c1f03c4ff24 254 PANTHER PTHR24322 14 142 4.3E-57 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE1363 b227b931158e33bffb160c1f03c4ff24 254 PANTHER PTHR24322 158 190 4.3E-57 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE1363 b227b931158e33bffb160c1f03c4ff24 254 SUPERFAMILY SSF51735 8 252 3.3E-79 T 22-04-2016 IPR016040 NAD(P)-binding domain YE1363 b227b931158e33bffb160c1f03c4ff24 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 8.9E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE1363 b227b931158e33bffb160c1f03c4ff24 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 8.9E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE1363 b227b931158e33bffb160c1f03c4ff24 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 8.9E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE1363 b227b931158e33bffb160c1f03c4ff24 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.9E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE1363 b227b931158e33bffb160c1f03c4ff24 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 1.9E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE1363 b227b931158e33bffb160c1f03c4ff24 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.9E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE1363 b227b931158e33bffb160c1f03c4ff24 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.9E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE1363 b227b931158e33bffb160c1f03c4ff24 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.9E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE1363 b227b931158e33bffb160c1f03c4ff24 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 1.9E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE1363 b227b931158e33bffb160c1f03c4ff24 254 Pfam PF00106 short chain dehydrogenase 11 203 8.5E-63 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE2015 acd7a3ff65b61aa51b2fa662abfd4213 391 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 2 381 3.7E-123 T 22-04-2016 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 YE2015 acd7a3ff65b61aa51b2fa662abfd4213 391 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 255 280 - T 22-04-2016 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 YE2015 acd7a3ff65b61aa51b2fa662abfd4213 391 Gene3D G3DSA:2.60.120.10 288 374 1.5E-12 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YE2015 acd7a3ff65b61aa51b2fa662abfd4213 391 PIRSF PIRSF001480 1 391 4.8E-111 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 YE2015 acd7a3ff65b61aa51b2fa662abfd4213 391 PANTHER PTHR10309:SF0 1 374 4.5E-142 T 22-04-2016 YE2015 acd7a3ff65b61aa51b2fa662abfd4213 391 SUPERFAMILY SSF51182 1 374 3.82E-106 T 22-04-2016 IPR011051 RmlC-like cupin domain YE2015 acd7a3ff65b61aa51b2fa662abfd4213 391 PANTHER PTHR10309 1 374 4.5E-142 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 YE2015 acd7a3ff65b61aa51b2fa662abfd4213 391 Gene3D G3DSA:1.10.441.10 274 287 2.0E-22 T 22-04-2016 YE2015 acd7a3ff65b61aa51b2fa662abfd4213 391 Gene3D G3DSA:1.10.441.10 141 231 2.0E-22 T 22-04-2016 YE2015 acd7a3ff65b61aa51b2fa662abfd4213 391 PRINTS PR00714 Phosphomannose isomerase type I signature 255 274 3.9E-73 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 YE2015 acd7a3ff65b61aa51b2fa662abfd4213 391 PRINTS PR00714 Phosphomannose isomerase type I signature 236 255 3.9E-73 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 YE2015 acd7a3ff65b61aa51b2fa662abfd4213 391 PRINTS PR00714 Phosphomannose isomerase type I signature 32 47 3.9E-73 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 YE2015 acd7a3ff65b61aa51b2fa662abfd4213 391 PRINTS PR00714 Phosphomannose isomerase type I signature 274 293 3.9E-73 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 YE2015 acd7a3ff65b61aa51b2fa662abfd4213 391 PRINTS PR00714 Phosphomannose isomerase type I signature 4 22 3.9E-73 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 YE2015 acd7a3ff65b61aa51b2fa662abfd4213 391 PRINTS PR00714 Phosphomannose isomerase type I signature 126 149 3.9E-73 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 YE2015 acd7a3ff65b61aa51b2fa662abfd4213 391 PRINTS PR00714 Phosphomannose isomerase type I signature 81 102 3.9E-73 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 YE2015 acd7a3ff65b61aa51b2fa662abfd4213 391 PRINTS PR00714 Phosphomannose isomerase type I signature 220 235 3.9E-73 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 YE2015 acd7a3ff65b61aa51b2fa662abfd4213 391 Pfam PF01238 Phosphomannose isomerase type I 1 356 4.1E-103 T 22-04-2016 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 YE2015 acd7a3ff65b61aa51b2fa662abfd4213 391 Gene3D G3DSA:2.60.120.10 238 273 1.2E-66 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YE2015 acd7a3ff65b61aa51b2fa662abfd4213 391 Gene3D G3DSA:2.60.120.10 6 140 1.2E-66 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YE2015 acd7a3ff65b61aa51b2fa662abfd4213 391 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 126 134 - T 22-04-2016 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 YE3034 635c53a000d2c3605c8710de954f6182 371 SUPERFAMILY SSF51395 1 366 4.58E-117 T 22-04-2016 YE3034 635c53a000d2c3605c8710de954f6182 371 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 3 341 1.4E-89 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 YE3034 635c53a000d2c3605c8710de954f6182 371 PANTHER PTHR22893:SF24 1 364 2.4E-160 T 22-04-2016 YE3034 635c53a000d2c3605c8710de954f6182 371 Gene3D G3DSA:3.20.20.70 1 364 9.5E-126 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YE3034 635c53a000d2c3605c8710de954f6182 371 PANTHER PTHR22893 1 364 2.4E-160 T 22-04-2016 YE0139 837ad2e2532dae08a98944c365337a81 632 Gene3D G3DSA:2.40.170.20 162 632 3.7E-85 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YE0139 837ad2e2532dae08a98944c365337a81 632 PANTHER PTHR30069 1 608 1.3E-227 T 22-04-2016 YE0139 837ad2e2532dae08a98944c365337a81 632 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 615 632 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site YE0139 837ad2e2532dae08a98944c365337a81 632 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 157 2.1E-26 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YE0139 837ad2e2532dae08a98944c365337a81 632 SUPERFAMILY SSF56935 37 632 1.4E-120 T 22-04-2016 YE0139 837ad2e2532dae08a98944c365337a81 632 TIGRFAM TIGR01779 TonB-B12: TonB-dependent vitamin B12 receptor 9 632 2.2E-196 T 22-04-2016 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0004872|GO:0015235|GO:0015889|GO:0016020 YE0139 837ad2e2532dae08a98944c365337a81 632 Hamap MF_01531 Vitamin B12 transporter BtuB [btuB]. 8 632 35.425 T 22-04-2016 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0004872|GO:0015235|GO:0015889|GO:0016020 YE0139 837ad2e2532dae08a98944c365337a81 632 PANTHER PTHR30069:SF10 1 608 1.3E-227 T 22-04-2016 YE0139 837ad2e2532dae08a98944c365337a81 632 Gene3D G3DSA:2.170.130.10 32 161 1.5E-38 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YE0139 837ad2e2532dae08a98944c365337a81 632 Pfam PF00593 TonB dependent receptor 399 631 7.8E-32 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YE3323 e971e5a2eea3d81232b202e1d928deee 238 PANTHER PTHR30060:SF1 1 235 3.9E-117 T 22-04-2016 YE3323 e971e5a2eea3d81232b202e1d928deee 238 Pfam PF03741 Integral membrane protein TerC family 16 202 8.5E-54 T 22-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 YE3323 e971e5a2eea3d81232b202e1d928deee 238 PANTHER PTHR30060 1 235 3.9E-117 T 22-04-2016 YE3424 9792735cce6630060d06f0b4192c1567 170 Hamap MF_00746 Protein SprT [sprT]. 12 165 41.322 T 22-04-2016 IPR023483 Uncharacterised protein family SprT YE3424 9792735cce6630060d06f0b4192c1567 170 PANTHER PTHR38773 2 165 1.0E-90 T 22-04-2016 YE3424 9792735cce6630060d06f0b4192c1567 170 SMART SM00731 16 165 3.8E-64 T 22-04-2016 IPR006640 SprT-like YE3424 9792735cce6630060d06f0b4192c1567 170 Pfam PF10263 SprT-like family 21 164 7.8E-28 T 22-04-2016 IPR006640 SprT-like YE3357 449ed02d85a3139bdd6ed8838ecf9439 360 SMART SM00354 4 71 1.4E-4 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE3357 449ed02d85a3139bdd6ed8838ecf9439 360 SUPERFAMILY SSF47413 4 60 4.99E-9 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE3357 449ed02d85a3139bdd6ed8838ecf9439 360 SUPERFAMILY SSF53822 75 340 6.64E-42 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YE3357 449ed02d85a3139bdd6ed8838ecf9439 360 Pfam PF13377 Periplasmic binding protein-like domain 173 338 1.1E-29 T 22-04-2016 YE3357 449ed02d85a3139bdd6ed8838ecf9439 360 Gene3D G3DSA:1.10.260.40 4 49 1.6E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE3357 449ed02d85a3139bdd6ed8838ecf9439 360 Gene3D G3DSA:3.40.50.2300 60 171 1.8E-14 T 22-04-2016 YE3357 449ed02d85a3139bdd6ed8838ecf9439 360 PANTHER PTHR30146 4 359 6.0E-112 T 22-04-2016 YE3357 449ed02d85a3139bdd6ed8838ecf9439 360 PANTHER PTHR30146:SF4 4 359 6.0E-112 T 22-04-2016 YE3357 449ed02d85a3139bdd6ed8838ecf9439 360 Gene3D G3DSA:3.40.50.2300 172 339 3.1E-38 T 22-04-2016 YE3357 449ed02d85a3139bdd6ed8838ecf9439 360 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 47 9.5E-9 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE3772 5c09cda92a922086a3deac5fc2fc9dc1 244 PIRSF PIRSF009120 1 244 3.7E-109 T 22-04-2016 IPR016545 Uncharacterised conserved protein UCP009120, proteasome-type protease, Sll0069 YE3772 5c09cda92a922086a3deac5fc2fc9dc1 244 Gene3D G3DSA:3.60.20.10 2 202 2.4E-18 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal YE3772 5c09cda92a922086a3deac5fc2fc9dc1 244 SUPERFAMILY SSF56235 2 239 7.94E-38 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal YE3772 5c09cda92a922086a3deac5fc2fc9dc1 244 Pfam PF00227 Proteasome subunit 4 185 4.5E-9 T 22-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 YE2150 91252d44c03ee276c3213194471274a5 543 PANTHER PTHR30443 1 542 4.4E-292 T 22-04-2016 YE2150 91252d44c03ee276c3213194471274a5 543 PANTHER PTHR30443:SF0 1 542 4.4E-292 T 22-04-2016 YE2150 91252d44c03ee276c3213194471274a5 543 Pfam PF08019 Domain of unknown function (DUF1705) 56 208 9.0E-51 T 22-04-2016 IPR012549 Domain of unknown function DUF1705 GO:0016021 YE2150 91252d44c03ee276c3213194471274a5 543 SUPERFAMILY SSF53649 237 539 1.2E-24 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 YE2150 91252d44c03ee276c3213194471274a5 543 Gene3D G3DSA:3.40.720.10 237 539 1.6E-17 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 YE2150 91252d44c03ee276c3213194471274a5 543 Pfam PF00884 Sulfatase 237 525 3.2E-48 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 YE0057 3796bb47580a79a27c3158678efc933b 287 Pfam PF03755 YicC-like family, N-terminal region 2 153 5.7E-42 T 22-04-2016 IPR013527 YicC-like, N-terminal YE0057 3796bb47580a79a27c3158678efc933b 287 Pfam PF08340 Domain of unknown function (DUF1732) 203 287 2.5E-34 T 22-04-2016 IPR013551 Domain of unknown function DUF1732 YE0057 3796bb47580a79a27c3158678efc933b 287 PANTHER PTHR30636 1 287 5.6E-112 T 22-04-2016 YE0057 3796bb47580a79a27c3158678efc933b 287 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 287 2.6E-128 T 22-04-2016 IPR005229 Conserved hypothetical protein CHP00255 YE2242 9f19a7f93713129f0db6a9cbcab1d4cb 449 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 181 4.0E-64 T 22-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 YE2242 9f19a7f93713129f0db6a9cbcab1d4cb 449 PIRSF PIRSF000124 1 441 2.6E-146 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 YE2242 9f19a7f93713129f0db6a9cbcab1d4cb 449 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 322 426 1.2E-30 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 YE2242 9f19a7f93713129f0db6a9cbcab1d4cb 449 Gene3D G3DSA:3.40.50.720 1 208 4.8E-72 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2242 9f19a7f93713129f0db6a9cbcab1d4cb 449 Gene3D G3DSA:3.40.50.720 237 446 6.4E-74 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2242 9f19a7f93713129f0db6a9cbcab1d4cb 449 SMART SM00984 322 426 4.2E-52 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 YE2242 9f19a7f93713129f0db6a9cbcab1d4cb 449 SUPERFAMILY SSF48179 205 301 4.65E-32 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 YE2242 9f19a7f93713129f0db6a9cbcab1d4cb 449 PIRSF PIRSF500134 1 444 1.2E-185 T 22-04-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 YE2242 9f19a7f93713129f0db6a9cbcab1d4cb 449 SUPERFAMILY SSF51735 1 197 8.17E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2242 9f19a7f93713129f0db6a9cbcab1d4cb 449 PANTHER PTHR11374 1 446 4.9E-254 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 YE2242 9f19a7f93713129f0db6a9cbcab1d4cb 449 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 422 7.2E-136 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 YE2242 9f19a7f93713129f0db6a9cbcab1d4cb 449 PANTHER PTHR11374:SF18 1 446 4.9E-254 T 22-04-2016 YE2242 9f19a7f93713129f0db6a9cbcab1d4cb 449 Gene3D G3DSA:1.20.5.100 209 235 5.2E-18 T 22-04-2016 YE2242 9f19a7f93713129f0db6a9cbcab1d4cb 449 SUPERFAMILY SSF52413 311 437 2.88E-39 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 YE2242 9f19a7f93713129f0db6a9cbcab1d4cb 449 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 206 298 4.1E-37 T 22-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 YE3918 37dd206a14d77ee1c07f68e9ddf79c19 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 22-04-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3918 37dd206a14d77ee1c07f68e9ddf79c19 110 PANTHER PTHR13501 1 109 2.6E-53 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 YE3918 37dd206a14d77ee1c07f68e9ddf79c19 110 SUPERFAMILY SSF54843 1 109 2.35E-42 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 YE3918 37dd206a14d77ee1c07f68e9ddf79c19 110 Gene3D G3DSA:3.90.470.10 1 109 1.2E-42 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 YE3918 37dd206a14d77ee1c07f68e9ddf79c19 110 Pfam PF00237 Ribosomal protein L22p/L17e 8 107 8.5E-34 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 YE3918 37dd206a14d77ee1c07f68e9ddf79c19 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 2.2E-50 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 YE3918 37dd206a14d77ee1c07f68e9ddf79c19 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 28.77 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 YE2519 45519eeece944df7d237d53ea779146d 240 PIRSF PIRSF000770 3 240 1.2E-40 T 22-04-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 YE2519 45519eeece944df7d237d53ea779146d 240 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 236 1.3E-32 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE2519 45519eeece944df7d237d53ea779146d 240 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 43 56 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE2519 45519eeece944df7d237d53ea779146d 240 SUPERFAMILY SSF88946 5 88 1.88E-23 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE2519 45519eeece944df7d237d53ea779146d 240 SUPERFAMILY SSF88659 90 156 4.14E-15 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE2519 45519eeece944df7d237d53ea779146d 240 Pfam PF04545 Sigma-70, region 4 185 234 3.3E-17 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE2519 45519eeece944df7d237d53ea779146d 240 Gene3D G3DSA:1.10.10.10 90 135 2.1E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2519 45519eeece944df7d237d53ea779146d 240 Gene3D G3DSA:1.10.601.10 10 80 5.4E-15 T 22-04-2016 YE2519 45519eeece944df7d237d53ea779146d 240 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 5 239 62.862 T 22-04-2016 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 YE2519 45519eeece944df7d237d53ea779146d 240 Pfam PF04542 Sigma-70 region 2 16 88 2.5E-16 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE2519 45519eeece944df7d237d53ea779146d 240 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 16 236 8.9E-86 T 22-04-2016 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 YE2519 45519eeece944df7d237d53ea779146d 240 Gene3D G3DSA:1.10.10.10 174 237 3.7E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2519 45519eeece944df7d237d53ea779146d 240 PANTHER PTHR30385:SF7 13 240 1.9E-70 T 22-04-2016 YE2519 45519eeece944df7d237d53ea779146d 240 PRINTS PR00046 Major sigma-70 factor signature 221 232 1.6E-13 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE2519 45519eeece944df7d237d53ea779146d 240 PRINTS PR00046 Major sigma-70 factor signature 43 56 1.6E-13 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE2519 45519eeece944df7d237d53ea779146d 240 PRINTS PR00046 Major sigma-70 factor signature 67 75 1.6E-13 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE2519 45519eeece944df7d237d53ea779146d 240 PRINTS PR00046 Major sigma-70 factor signature 189 201 1.6E-13 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE2519 45519eeece944df7d237d53ea779146d 240 PRINTS PR00046 Major sigma-70 factor signature 206 221 1.6E-13 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE2519 45519eeece944df7d237d53ea779146d 240 Pfam PF04539 Sigma-70 region 3 97 160 9.7E-15 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE2519 45519eeece944df7d237d53ea779146d 240 SUPERFAMILY SSF88659 150 238 1.53E-21 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE2519 45519eeece944df7d237d53ea779146d 240 PANTHER PTHR30385 13 240 1.9E-70 T 22-04-2016 YE2519 45519eeece944df7d237d53ea779146d 240 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 206 232 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 YE4182 d5db0a5e78cc359e81785193f5ff3b5d 221 PANTHER PTHR30450:SF6 11 220 4.8E-103 T 22-04-2016 YE4182 d5db0a5e78cc359e81785193f5ff3b5d 221 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 218 3.0E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE4182 d5db0a5e78cc359e81785193f5ff3b5d 221 PANTHER PTHR30450 11 220 4.8E-103 T 22-04-2016 YE4182 d5db0a5e78cc359e81785193f5ff3b5d 221 SUPERFAMILY SSF161098 11 203 2.35E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE4182 d5db0a5e78cc359e81785193f5ff3b5d 221 Gene3D G3DSA:1.10.3720.10 10 218 9.5E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE0906 e583d3d6cc479300f56d892694fb7577 771 Pfam PF03176 MMPL family 229 397 1.3E-7 T 22-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 YE0906 e583d3d6cc479300f56d892694fb7577 771 SUPERFAMILY SSF82866 225 398 2.62E-19 T 22-04-2016 YE0906 e583d3d6cc479300f56d892694fb7577 771 SUPERFAMILY SSF82866 637 764 1.31E-18 T 22-04-2016 YE0906 e583d3d6cc479300f56d892694fb7577 771 Gene3D G3DSA:1.20.1640.10 623 706 4.0E-10 T 22-04-2016 YE0906 e583d3d6cc479300f56d892694fb7577 771 Gene3D G3DSA:1.20.1640.10 207 401 1.5E-18 T 22-04-2016 YE1440 7c685c90c2c1420870f0c540febf461f 396 Gene3D G3DSA:3.20.20.150 1 391 9.2E-153 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YE1440 7c685c90c2c1420870f0c540febf461f 396 SUPERFAMILY SSF51658 1 383 9.33E-80 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YE1440 7c685c90c2c1420870f0c540febf461f 396 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 1 392 2.2E-214 T 22-04-2016 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242|UniPathway: UPA00246 YE1440 7c685c90c2c1420870f0c540febf461f 396 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 396 227.075 T 22-04-2016 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242|UniPathway: UPA00246 YE1440 7c685c90c2c1420870f0c540febf461f 396 PIRSF PIRSF016049 1 392 2.3E-180 T 22-04-2016 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242|UniPathway: UPA00246 YE1440 7c685c90c2c1420870f0c540febf461f 396 PANTHER PTHR30387:SF2 1 396 6.4E-184 T 22-04-2016 YE1440 7c685c90c2c1420870f0c540febf461f 396 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 388 1.7E-157 T 22-04-2016 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242|UniPathway: UPA00246 YE1440 7c685c90c2c1420870f0c540febf461f 396 PANTHER PTHR30387 1 396 6.4E-184 T 22-04-2016 YE4205 a5a679f97ffa865f540d07694c565ae2 140 SUPERFAMILY SSF51344 4 87 6.93E-24 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 YE4205 a5a679f97ffa865f540d07694c565ae2 140 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 134 2.1E-45 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 YE4205 a5a679f97ffa865f540d07694c565ae2 140 Gene3D G3DSA:1.20.5.440 93 135 6.6E-25 T 22-04-2016 YE4205 a5a679f97ffa865f540d07694c565ae2 140 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 4 132 21.264 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 YE4205 a5a679f97ffa865f540d07694c565ae2 140 PANTHER PTHR13822 1 140 2.0E-47 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 YE4205 a5a679f97ffa865f540d07694c565ae2 140 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 90 134 1.2E-12 T 22-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain YE4205 a5a679f97ffa865f540d07694c565ae2 140 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 7 85 1.7E-28 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 YE4205 a5a679f97ffa865f540d07694c565ae2 140 SUPERFAMILY SSF46604 90 138 2.88E-15 T 22-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain YE4205 a5a679f97ffa865f540d07694c565ae2 140 Gene3D G3DSA:2.60.15.10 4 92 4.9E-29 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 YE4205 a5a679f97ffa865f540d07694c565ae2 140 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 11 88 1.0E-38 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 YE0905 ed36b60d2225f8d3a5e1478c1bccbaa4 201 Gene3D G3DSA:2.50.20.10 22 185 1.2E-14 T 22-04-2016 YE0905 ed36b60d2225f8d3a5e1478c1bccbaa4 201 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 34 188 1.5E-9 T 22-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like YE0905 ed36b60d2225f8d3a5e1478c1bccbaa4 201 SUPERFAMILY SSF89392 21 188 1.1E-19 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX YE0571 b659adac42c0658e404a67804d90bbfa 440 PANTHER PTHR10515:SF0 2 440 2.2E-224 T 22-04-2016 YE0571 b659adac42c0658e404a67804d90bbfa 440 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 5 423 1.7E-167 T 22-04-2016 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|UniPathway: UPA00578 YE0571 b659adac42c0658e404a67804d90bbfa 440 SUPERFAMILY SSF52418 75 334 1.44E-87 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 YE0571 b659adac42c0658e404a67804d90bbfa 440 SUPERFAMILY SSF47648 3 70 2.75E-21 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain YE0571 b659adac42c0658e404a67804d90bbfa 440 Gene3D G3DSA:3.40.1030.10 75 337 2.2E-110 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 YE0571 b659adac42c0658e404a67804d90bbfa 440 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 113 128 - T 22-04-2016 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 YE0571 b659adac42c0658e404a67804d90bbfa 440 PANTHER PTHR10515 2 440 2.2E-224 T 22-04-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 YE0571 b659adac42c0658e404a67804d90bbfa 440 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 1.1E-18 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain YE0571 b659adac42c0658e404a67804d90bbfa 440 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 2 438 7.1E-229 T 22-04-2016 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|UniPathway: UPA00578 YE0571 b659adac42c0658e404a67804d90bbfa 440 Gene3D G3DSA:3.90.1170.30 338 433 1.3E-36 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 YE0571 b659adac42c0658e404a67804d90bbfa 440 SUPERFAMILY SSF54680 337 439 1.24E-32 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 YE0571 b659adac42c0658e404a67804d90bbfa 440 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 351 423 3.7E-25 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 YE0571 b659adac42c0658e404a67804d90bbfa 440 Gene3D G3DSA:1.20.970.10 2 68 1.1E-29 T 22-04-2016 YE0571 b659adac42c0658e404a67804d90bbfa 440 PIRSF PIRSF000478 1 439 2.4E-153 T 22-04-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 YE0571 b659adac42c0658e404a67804d90bbfa 440 Hamap MF_01628 Thymidine phosphorylase [deoA]. 1 439 53.736 T 22-04-2016 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|UniPathway: UPA00578 YE0571 b659adac42c0658e404a67804d90bbfa 440 Pfam PF00591 Glycosyl transferase family, a/b domain 79 309 2.6E-51 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 YE0571 b659adac42c0658e404a67804d90bbfa 440 SMART SM00941 350 424 1.3E-32 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 YE3119 59ba3616c2d8a65b1659de3076a21d4f 431 PANTHER PTHR11730:SF17 6 431 5.6E-191 T 22-04-2016 YE3119 59ba3616c2d8a65b1659de3076a21d4f 431 ProSitePatterns PS01219 Ammonium transporters signature. 185 210 - T 22-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 YE3119 59ba3616c2d8a65b1659de3076a21d4f 431 Pfam PF00909 Ammonium Transporter Family 36 429 1.2E-127 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 YE3119 59ba3616c2d8a65b1659de3076a21d4f 431 TIGRFAM TIGR00836 amt: ammonium transporter 34 429 2.4E-137 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 YE3119 59ba3616c2d8a65b1659de3076a21d4f 431 PANTHER PTHR11730 6 431 5.6E-191 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 YE3119 59ba3616c2d8a65b1659de3076a21d4f 431 PRINTS PR00342 Rhesus blood group protein signature 129 145 7.4E-5 T 22-04-2016 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 YE3119 59ba3616c2d8a65b1659de3076a21d4f 431 PRINTS PR00342 Rhesus blood group protein signature 255 277 7.4E-5 T 22-04-2016 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 YE3119 59ba3616c2d8a65b1659de3076a21d4f 431 PRINTS PR00342 Rhesus blood group protein signature 224 242 7.4E-5 T 22-04-2016 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 YE3119 59ba3616c2d8a65b1659de3076a21d4f 431 PRINTS PR00342 Rhesus blood group protein signature 310 328 7.4E-5 T 22-04-2016 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 YE3119 59ba3616c2d8a65b1659de3076a21d4f 431 SUPERFAMILY SSF111352 30 410 1.83E-128 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 YE3119 59ba3616c2d8a65b1659de3076a21d4f 431 Gene3D G3DSA:1.10.3430.10 29 410 1.0E-139 T 22-04-2016 IPR029020 Ammonium/urea transporter YE3164 d95b8c3decda800bb2be071fcabb4b4a 615 Pfam PF13721 SecD export protein N-terminal TM region 2 103 1.2E-36 T 22-04-2016 IPR027398 SecD export protein N-terminal TM domain YE3164 d95b8c3decda800bb2be071fcabb4b4a 615 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 345 594 8.0E-84 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial YE3164 d95b8c3decda800bb2be071fcabb4b4a 615 Pfam PF02355 Protein export membrane protein 433 601 4.1E-16 T 22-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial YE3164 d95b8c3decda800bb2be071fcabb4b4a 615 PANTHER PTHR30081 224 282 3.9E-240 T 22-04-2016 YE3164 d95b8c3decda800bb2be071fcabb4b4a 615 Gene3D G3DSA:1.20.1640.10 442 608 3.3E-24 T 22-04-2016 YE3164 d95b8c3decda800bb2be071fcabb4b4a 615 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 614 47.926 T 22-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 YE3164 d95b8c3decda800bb2be071fcabb4b4a 615 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 123 601 7.4E-151 T 22-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 YE3164 d95b8c3decda800bb2be071fcabb4b4a 615 PANTHER PTHR30081:SF1 224 282 3.9E-240 T 22-04-2016 YE3164 d95b8c3decda800bb2be071fcabb4b4a 615 SUPERFAMILY SSF82866 410 606 1.19E-41 T 22-04-2016 YE3164 d95b8c3decda800bb2be071fcabb4b4a 615 PANTHER PTHR30081:SF1 1 173 3.9E-240 T 22-04-2016 YE3164 d95b8c3decda800bb2be071fcabb4b4a 615 PANTHER PTHR30081:SF1 313 613 3.9E-240 T 22-04-2016 YE3164 d95b8c3decda800bb2be071fcabb4b4a 615 PANTHER PTHR30081 1 173 3.9E-240 T 22-04-2016 YE3164 d95b8c3decda800bb2be071fcabb4b4a 615 PANTHER PTHR30081 313 613 3.9E-240 T 22-04-2016 YE3164 d95b8c3decda800bb2be071fcabb4b4a 615 Pfam PF07549 SecD/SecF GG Motif 120 140 4.2E-6 T 22-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site YE3290 ff77e3e66f9acaa992b7e8492b3b67b6 257 SUPERFAMILY SSF55120 2 236 5.92E-62 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 YE3290 ff77e3e66f9acaa992b7e8492b3b67b6 257 PANTHER PTHR11079 3 245 1.1E-91 T 22-04-2016 YE3290 ff77e3e66f9acaa992b7e8492b3b67b6 257 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 50 64 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 YE3290 ff77e3e66f9acaa992b7e8492b3b67b6 257 Pfam PF00849 RNA pseudouridylate synthase 10 170 1.5E-33 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 YE3290 ff77e3e66f9acaa992b7e8492b3b67b6 257 PANTHER PTHR11079:SF60 3 245 1.1E-91 T 22-04-2016 YE2441 c9763e8797dc35235842fef67db30c12 294 Pfam PF03466 LysR substrate binding domain 93 289 2.8E-33 T 22-04-2016 IPR005119 LysR, substrate-binding YE2441 c9763e8797dc35235842fef67db30c12 294 SUPERFAMILY SSF53850 83 290 3.62E-31 T 22-04-2016 YE2441 c9763e8797dc35235842fef67db30c12 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 4.8E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE2441 c9763e8797dc35235842fef67db30c12 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 4.8E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE2441 c9763e8797dc35235842fef67db30c12 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 4.8E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE2441 c9763e8797dc35235842fef67db30c12 294 Gene3D G3DSA:1.10.10.10 4 86 6.4E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2441 c9763e8797dc35235842fef67db30c12 294 Gene3D G3DSA:3.40.190.10 178 257 6.8E-16 T 22-04-2016 YE2441 c9763e8797dc35235842fef67db30c12 294 Gene3D G3DSA:3.40.190.10 95 177 2.4E-24 T 22-04-2016 YE2441 c9763e8797dc35235842fef67db30c12 294 PANTHER PTHR30537 1 292 1.6E-89 T 22-04-2016 YE2441 c9763e8797dc35235842fef67db30c12 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.7E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE2441 c9763e8797dc35235842fef67db30c12 294 SUPERFAMILY SSF46785 2 86 2.43E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2441 c9763e8797dc35235842fef67db30c12 294 PANTHER PTHR30537:SF26 1 292 1.6E-89 T 22-04-2016 YE1672 6351677e9db107bb36a5d129a55dbad7 131 SUPERFAMILY SSF55166 7 125 3.26E-30 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain YE1672 6351677e9db107bb36a5d129a55dbad7 131 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 58 124 2.7E-18 T 22-04-2016 YE1672 6351677e9db107bb36a5d129a55dbad7 131 Gene3D G3DSA:3.30.1380.10 17 90 0.001 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain YE2602 f8c56aac456f2251efd2d3ce508b3f91 170 PANTHER PTHR30251:SF3 1 170 8.5E-85 T 22-04-2016 YE2602 f8c56aac456f2251efd2d3ce508b3f91 170 SUPERFAMILY SSF49354 4 80 7.85E-9 T 22-04-2016 IPR008962 PapD-like YE2602 f8c56aac456f2251efd2d3ce508b3f91 170 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 10 81 5.5E-10 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 YE2602 f8c56aac456f2251efd2d3ce508b3f91 170 Gene3D G3DSA:2.60.40.360 9 81 4.4E-5 T 22-04-2016 IPR008962 PapD-like YE2602 f8c56aac456f2251efd2d3ce508b3f91 170 PANTHER PTHR30251 1 170 8.5E-85 T 22-04-2016 YE2602 f8c56aac456f2251efd2d3ce508b3f91 170 SUPERFAMILY SSF49584 85 163 1.44E-5 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YE3653 cd4c699169d3b77ac6f119458b99c917 767 PANTHER PTHR32331:SF3 7 721 0.0 T 22-04-2016 YE3653 cd4c699169d3b77ac6f119458b99c917 767 Pfam PF11842 Domain of unknown function (DUF3362) 590 734 1.0E-43 T 22-04-2016 IPR024560 Uncharacterised protein family UPF0313, C-terminal YE3653 cd4c699169d3b77ac6f119458b99c917 767 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 28 640 2.9E-266 T 22-04-2016 IPR022946 Uncharacterised protein family UPF0313 YE3653 cd4c699169d3b77ac6f119458b99c917 767 Pfam PF04055 Radical SAM superfamily 376 581 3.0E-19 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 YE3653 cd4c699169d3b77ac6f119458b99c917 767 SMART SM00729 372 622 1.7E-6 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 YE3653 cd4c699169d3b77ac6f119458b99c917 767 PANTHER PTHR32331 7 721 0.0 T 22-04-2016 YE3653 cd4c699169d3b77ac6f119458b99c917 767 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 27 689 49.012 T 22-04-2016 IPR022946 Uncharacterised protein family UPF0313 YE3653 cd4c699169d3b77ac6f119458b99c917 767 Gene3D G3DSA:3.80.30.20 370 637 4.4E-47 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe YE3653 cd4c699169d3b77ac6f119458b99c917 767 Pfam PF08497 Radical SAM N-terminal 28 375 2.4E-146 T 22-04-2016 IPR013704 Uncharacterised protein family UPF0313, N-terminal YE3653 cd4c699169d3b77ac6f119458b99c917 767 SUPERFAMILY SSF102114 361 436 7.72E-11 T 22-04-2016 YE3653 cd4c699169d3b77ac6f119458b99c917 767 SUPERFAMILY SSF102114 466 652 7.72E-11 T 22-04-2016 YE3653 cd4c699169d3b77ac6f119458b99c917 767 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 376 396 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 YE0343 2283ea2ed4370e8b7defc7dff99864e8 297 Gene3D G3DSA:3.40.190.10 178 265 1.5E-22 T 22-04-2016 YE0343 2283ea2ed4370e8b7defc7dff99864e8 297 SUPERFAMILY SSF46785 3 82 2.95E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0343 2283ea2ed4370e8b7defc7dff99864e8 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 8.9E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE0343 2283ea2ed4370e8b7defc7dff99864e8 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 8.9E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE0343 2283ea2ed4370e8b7defc7dff99864e8 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 8.9E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE0343 2283ea2ed4370e8b7defc7dff99864e8 297 PANTHER PTHR30537 1 294 1.6E-166 T 22-04-2016 YE0343 2283ea2ed4370e8b7defc7dff99864e8 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 3.8E-23 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE0343 2283ea2ed4370e8b7defc7dff99864e8 297 Gene3D G3DSA:3.40.190.10 94 177 2.8E-17 T 22-04-2016 YE0343 2283ea2ed4370e8b7defc7dff99864e8 297 Pfam PF03466 LysR substrate binding domain 90 294 6.3E-32 T 22-04-2016 IPR005119 LysR, substrate-binding YE0343 2283ea2ed4370e8b7defc7dff99864e8 297 Gene3D G3DSA:1.10.10.10 2 83 4.4E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0343 2283ea2ed4370e8b7defc7dff99864e8 297 SUPERFAMILY SSF53850 91 294 1.45E-38 T 22-04-2016 YE0343 2283ea2ed4370e8b7defc7dff99864e8 297 PANTHER PTHR30537:SF1 1 294 1.6E-166 T 22-04-2016 YE0195 f03bedb68e8fa0e267bbd980f6b686e2 238 Gene3D G3DSA:3.40.50.1000 106 238 4.3E-30 T 22-04-2016 IPR023214 HAD-like domain YE0195 f03bedb68e8fa0e267bbd980f6b686e2 238 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 207 4.9E-12 T 22-04-2016 IPR023214 HAD-like domain YE0195 f03bedb68e8fa0e267bbd980f6b686e2 238 SUPERFAMILY SSF56784 10 238 3.13E-41 T 22-04-2016 IPR023214 HAD-like domain YE0195 f03bedb68e8fa0e267bbd980f6b686e2 238 PANTHER PTHR12725 1 238 3.7E-84 T 22-04-2016 YE0195 f03bedb68e8fa0e267bbd980f6b686e2 238 PANTHER PTHR12725:SF65 1 238 3.7E-84 T 22-04-2016 YE0195 f03bedb68e8fa0e267bbd980f6b686e2 238 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 118 201 1.9E-12 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YE0195 f03bedb68e8fa0e267bbd980f6b686e2 238 Gene3D G3DSA:3.40.50.1000 10 51 4.2E-5 T 22-04-2016 IPR023214 HAD-like domain YE0104 d902fc339baef2eed2d9e3c819f509ea 443 SMART SM01086 335 434 6.4E-24 T 22-04-2016 IPR019489 Clp ATPase, C-terminal YE0104 d902fc339baef2eed2d9e3c819f509ea 443 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 443 43.64 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 YE0104 d902fc339baef2eed2d9e3c819f509ea 443 PANTHER PTHR11262:SF3 1 105 1.2E-212 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 YE0104 d902fc339baef2eed2d9e3c819f509ea 443 PANTHER PTHR11262:SF3 218 443 1.2E-212 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 YE0104 d902fc339baef2eed2d9e3c819f509ea 443 SMART SM00382 49 332 9.5E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain YE0104 d902fc339baef2eed2d9e3c819f509ea 443 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 102 9.4E-7 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 YE0104 d902fc339baef2eed2d9e3c819f509ea 443 Gene3D G3DSA:3.40.50.300 245 331 2.5E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0104 d902fc339baef2eed2d9e3c819f509ea 443 Gene3D G3DSA:3.40.50.300 3 110 2.5E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0104 d902fc339baef2eed2d9e3c819f509ea 443 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 443 2.0E-231 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 YE0104 d902fc339baef2eed2d9e3c819f509ea 443 SUPERFAMILY SSF52540 3 441 8.57E-95 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0104 d902fc339baef2eed2d9e3c819f509ea 443 Pfam PF07724 AAA domain (Cdc48 subfamily) 187 329 1.9E-41 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 YE0104 d902fc339baef2eed2d9e3c819f509ea 443 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 335 405 1.5E-6 T 22-04-2016 IPR019489 Clp ATPase, C-terminal YE0104 d902fc339baef2eed2d9e3c819f509ea 443 PANTHER PTHR11262 1 105 1.2E-212 T 22-04-2016 YE0104 d902fc339baef2eed2d9e3c819f509ea 443 PANTHER PTHR11262 218 443 1.2E-212 T 22-04-2016 YE0104 d902fc339baef2eed2d9e3c819f509ea 443 Gene3D G3DSA:1.10.8.10 213 243 1.7E-34 T 22-04-2016 YE0104 d902fc339baef2eed2d9e3c819f509ea 443 Gene3D G3DSA:1.10.8.10 111 177 1.7E-34 T 22-04-2016 YE0104 d902fc339baef2eed2d9e3c819f509ea 443 Gene3D G3DSA:1.10.8.60 335 443 4.1E-36 T 22-04-2016 YE0407 5e97090ccd7fa7f1a78aa2fa23cfeceb 120 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 3 109 2.4E-22 T 22-04-2016 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like YE0407 5e97090ccd7fa7f1a78aa2fa23cfeceb 120 Gene3D G3DSA:3.10.490.10 1 117 1.7E-39 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like YE0407 5e97090ccd7fa7f1a78aa2fa23cfeceb 120 PANTHER PTHR12510 1 114 2.6E-71 T 22-04-2016 YE0407 5e97090ccd7fa7f1a78aa2fa23cfeceb 120 SUPERFAMILY SSF110857 1 115 1.44E-33 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like YE0407 5e97090ccd7fa7f1a78aa2fa23cfeceb 120 PANTHER PTHR12510:SF6 1 114 2.6E-71 T 22-04-2016 YE3602 884c787194d2735d99f428cca5b501a6 367 TIGRFAM TIGR00075 hypD: hydrogenase expression/formation protein HypD 2 367 4.6E-154 T 22-04-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 YE3602 884c787194d2735d99f428cca5b501a6 367 Pfam PF01924 Hydrogenase formation hypA family 18 367 7.1E-150 T 22-04-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 YE3602 884c787194d2735d99f428cca5b501a6 367 PANTHER PTHR30149 2 367 3.7E-189 T 22-04-2016 YE3602 884c787194d2735d99f428cca5b501a6 367 PANTHER PTHR30149:SF0 2 367 3.7E-189 T 22-04-2016 YE3602 884c787194d2735d99f428cca5b501a6 367 PIRSF PIRSF005622 1 367 1.0E-153 T 22-04-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 YE2253 ae68b27e8f30356dd00a0c295e283601 286 SUPERFAMILY SSF46785 5 79 3.47E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2253 ae68b27e8f30356dd00a0c295e283601 286 PANTHER PTHR30346 2 286 1.0E-83 T 22-04-2016 YE2253 ae68b27e8f30356dd00a0c295e283601 286 Gene3D G3DSA:1.10.10.10 5 80 1.3E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2253 ae68b27e8f30356dd00a0c295e283601 286 PANTHER PTHR30346:SF3 2 286 1.0E-83 T 22-04-2016 YE2253 ae68b27e8f30356dd00a0c295e283601 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.7E-14 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE3163 07983006d1ba924cf6af0bb3e202e056 322 Pfam PF07549 SecD/SecF GG Motif 40 66 2.0E-11 T 22-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site YE3163 07983006d1ba924cf6af0bb3e202e056 322 PANTHER PTHR30081 7 317 3.5E-95 T 22-04-2016 YE3163 07983006d1ba924cf6af0bb3e202e056 322 Gene3D G3DSA:1.20.1640.10 135 304 2.3E-29 T 22-04-2016 YE3163 07983006d1ba924cf6af0bb3e202e056 322 PRINTS PR01755 Bacterial translocase SecF protein signature 159 173 1.8E-33 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial YE3163 07983006d1ba924cf6af0bb3e202e056 322 PRINTS PR01755 Bacterial translocase SecF protein signature 207 225 1.8E-33 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial YE3163 07983006d1ba924cf6af0bb3e202e056 322 PRINTS PR01755 Bacterial translocase SecF protein signature 239 254 1.8E-33 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial YE3163 07983006d1ba924cf6af0bb3e202e056 322 PRINTS PR01755 Bacterial translocase SecF protein signature 44 59 1.8E-33 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial YE3163 07983006d1ba924cf6af0bb3e202e056 322 Pfam PF02355 Protein export membrane protein 117 300 1.3E-71 T 22-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial YE3163 07983006d1ba924cf6af0bb3e202e056 322 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 45 291 2.5E-88 T 22-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 YE3163 07983006d1ba924cf6af0bb3e202e056 322 SUPERFAMILY SSF82866 80 302 4.97E-42 T 22-04-2016 YE3163 07983006d1ba924cf6af0bb3e202e056 322 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 17 302 28.484 T 22-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 YE3163 07983006d1ba924cf6af0bb3e202e056 322 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 126 288 1.7E-55 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial YE1793 a3f62c55d7e2ab29ab9c0b0d3841306c 318 Gene3D G3DSA:3.40.50.1820 10 301 7.8E-74 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE1793 a3f62c55d7e2ab29ab9c0b0d3841306c 318 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 12 314 1.3E-125 T 22-04-2016 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 YE1793 a3f62c55d7e2ab29ab9c0b0d3841306c 318 PANTHER PTHR10992 1 177 7.5E-147 T 22-04-2016 YE1793 a3f62c55d7e2ab29ab9c0b0d3841306c 318 PANTHER PTHR10992 214 314 7.5E-147 T 22-04-2016 YE1793 a3f62c55d7e2ab29ab9c0b0d3841306c 318 Pfam PF00561 alpha/beta hydrolase fold 41 297 2.2E-32 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 YE1793 a3f62c55d7e2ab29ab9c0b0d3841306c 318 SUPERFAMILY SSF53474 7 314 6.22E-62 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE1793 a3f62c55d7e2ab29ab9c0b0d3841306c 318 PIRSF PIRSF006431 2 318 4.6E-140 T 22-04-2016 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 YE1793 a3f62c55d7e2ab29ab9c0b0d3841306c 318 PRINTS PR00111 Alpha/beta hydrolase fold signature 123 136 5.3E-6 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 YE1793 a3f62c55d7e2ab29ab9c0b0d3841306c 318 PRINTS PR00111 Alpha/beta hydrolase fold signature 63 78 5.3E-6 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 YE1793 a3f62c55d7e2ab29ab9c0b0d3841306c 318 PRINTS PR00111 Alpha/beta hydrolase fold signature 109 122 5.3E-6 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 YE1793 a3f62c55d7e2ab29ab9c0b0d3841306c 318 PANTHER PTHR10992:SF860 1 177 7.5E-147 T 22-04-2016 YE1793 a3f62c55d7e2ab29ab9c0b0d3841306c 318 PANTHER PTHR10992:SF860 214 314 7.5E-147 T 22-04-2016 YE1793 a3f62c55d7e2ab29ab9c0b0d3841306c 318 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 40 48 2.6E-13 T 22-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 YE1793 a3f62c55d7e2ab29ab9c0b0d3841306c 318 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 66 77 2.6E-13 T 22-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 YE1793 a3f62c55d7e2ab29ab9c0b0d3841306c 318 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 109 123 2.6E-13 T 22-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 YE2055 56710eb0621b74ca56ae301e2b676d45 468 Gene3D G3DSA:1.20.1250.20 258 452 5.8E-26 T 22-04-2016 YE2055 56710eb0621b74ca56ae301e2b676d45 468 Gene3D G3DSA:1.20.1250.20 43 226 9.8E-39 T 22-04-2016 YE2055 56710eb0621b74ca56ae301e2b676d45 468 PANTHER PTHR11662 2 451 4.4E-74 T 22-04-2016 YE2055 56710eb0621b74ca56ae301e2b676d45 468 PANTHER PTHR11662:SF141 2 451 4.4E-74 T 22-04-2016 YE2055 56710eb0621b74ca56ae301e2b676d45 468 Pfam PF07690 Major Facilitator Superfamily 52 407 2.1E-35 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YE2055 56710eb0621b74ca56ae301e2b676d45 468 SUPERFAMILY SSF103473 39 452 1.44E-60 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE2055 56710eb0621b74ca56ae301e2b676d45 468 PIRSF PIRSF002808 26 467 7.4E-101 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 YE2425 166a3fa0da5aca431b085ebfe2175c9f 371 SUPERFAMILY SSF55073 199 350 1.18E-41 T 22-04-2016 IPR029787 Nucleotide cyclase YE2425 166a3fa0da5aca431b085ebfe2175c9f 371 PANTHER PTHR10799 223 352 9.5E-30 T 22-04-2016 YE2425 166a3fa0da5aca431b085ebfe2175c9f 371 PANTHER PTHR10799 39 184 9.5E-30 T 22-04-2016 YE2425 166a3fa0da5aca431b085ebfe2175c9f 371 Gene3D G3DSA:3.30.70.270 196 350 1.5E-46 T 22-04-2016 YE2425 166a3fa0da5aca431b085ebfe2175c9f 371 Pfam PF00990 Diguanylate cyclase, GGDEF domain 194 347 1.8E-40 T 22-04-2016 IPR000160 GGDEF domain YE2425 166a3fa0da5aca431b085ebfe2175c9f 371 SMART SM00267 183 351 1.1E-49 T 22-04-2016 IPR000160 GGDEF domain YE2425 166a3fa0da5aca431b085ebfe2175c9f 371 PANTHER PTHR10799:SF750 223 352 9.5E-30 T 22-04-2016 YE2425 166a3fa0da5aca431b085ebfe2175c9f 371 PANTHER PTHR10799:SF750 39 184 9.5E-30 T 22-04-2016 YE2425 166a3fa0da5aca431b085ebfe2175c9f 371 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 192 351 2.3E-42 T 22-04-2016 IPR000160 GGDEF domain YE3154 4843334653f5b88bcbfe6b35c9a692fc 306 SUPERFAMILY SSF48576 9 285 1.42E-89 T 22-04-2016 IPR008949 Isoprenoid synthase domain YE3154 4843334653f5b88bcbfe6b35c9a692fc 306 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 222 234 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 YE3154 4843334653f5b88bcbfe6b35c9a692fc 306 Gene3D G3DSA:1.10.600.10 8 298 5.2E-91 T 22-04-2016 IPR008949 Isoprenoid synthase domain YE3154 4843334653f5b88bcbfe6b35c9a692fc 306 Pfam PF00348 Polyprenyl synthetase 39 269 5.3E-58 T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 YE3154 4843334653f5b88bcbfe6b35c9a692fc 306 PANTHER PTHR12001:SF23 9 282 3.3E-108 T 22-04-2016 YE3154 4843334653f5b88bcbfe6b35c9a692fc 306 PANTHER PTHR12001 9 282 3.3E-108 T 22-04-2016 IPR017446 Polyprenyl synthetase-related YE3154 4843334653f5b88bcbfe6b35c9a692fc 306 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 88 104 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 YE1820 f80d2b119af80b6b99873af26a65d28d 178 ProSitePatterns PS00694 Enterobacterial virulence outer membrane protein signature 1. 51 59 - T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YE1820 f80d2b119af80b6b99873af26a65d28d 178 PANTHER PTHR35892:SF2 2 178 9.8E-67 T 22-04-2016 YE1820 f80d2b119af80b6b99873af26a65d28d 178 Pfam PF13505 Outer membrane protein beta-barrel domain 11 178 1.4E-31 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel YE1820 f80d2b119af80b6b99873af26a65d28d 178 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 170 178 - T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YE1820 f80d2b119af80b6b99873af26a65d28d 178 PANTHER PTHR35892 2 178 9.8E-67 T 22-04-2016 YE1820 f80d2b119af80b6b99873af26a65d28d 178 SUPERFAMILY SSF56925 29 178 3.92E-32 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YE1820 f80d2b119af80b6b99873af26a65d28d 178 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 139 160 3.4E-36 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YE1820 f80d2b119af80b6b99873af26a65d28d 178 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 166 177 3.4E-36 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YE1820 f80d2b119af80b6b99873af26a65d28d 178 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 50 62 3.4E-36 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YE1820 f80d2b119af80b6b99873af26a65d28d 178 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 93 116 3.4E-36 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 YE1820 f80d2b119af80b6b99873af26a65d28d 178 Gene3D G3DSA:2.40.160.20 27 178 1.5E-43 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YE0215 dc920919a2d502db6866d4132851645a 147 Pfam PF08786 Domain of unknown function (DUF1795) 13 143 5.0E-28 T 22-04-2016 IPR014894 Protein DcrB YE0215 dc920919a2d502db6866d4132851645a 147 Gene3D G3DSA:3.40.1000.10 54 146 2.0E-4 T 22-04-2016 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich YE3721 13f2c0e0009591411767b80f42d08088 234 SUPERFAMILY SSF51182 1 232 2.63E-48 T 22-04-2016 IPR011051 RmlC-like cupin domain YE3721 13f2c0e0009591411767b80f42d08088 234 Pfam PF02678 Pirin 5 119 9.7E-22 T 22-04-2016 IPR003829 Pirin, N-terminal domain YE3721 13f2c0e0009591411767b80f42d08088 234 PANTHER PTHR13903:SF14 1 234 1.9E-152 T 22-04-2016 YE3721 13f2c0e0009591411767b80f42d08088 234 PANTHER PTHR13903 1 234 1.9E-152 T 22-04-2016 IPR012093 Pirin YE3721 13f2c0e0009591411767b80f42d08088 234 PIRSF PIRSF006232 1 232 3.7E-33 T 22-04-2016 IPR012093 Pirin YE3721 13f2c0e0009591411767b80f42d08088 234 Gene3D G3DSA:2.60.120.10 4 232 8.2E-36 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YE4199 ee515aebddf590e2644911115ead7d86 295 PANTHER PTHR30425:SF0 5 294 1.5E-136 T 22-04-2016 YE4199 ee515aebddf590e2644911115ead7d86 295 Gene3D G3DSA:1.10.3720.10 28 294 2.9E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE4199 ee515aebddf590e2644911115ead7d86 295 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 28 293 1.1E-84 T 22-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 YE4199 ee515aebddf590e2644911115ead7d86 295 PANTHER PTHR30425 5 294 1.5E-136 T 22-04-2016 YE4199 ee515aebddf590e2644911115ead7d86 295 SUPERFAMILY SSF161098 31 285 9.29E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE4199 ee515aebddf590e2644911115ead7d86 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 289 7.8E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE0809 a91f028930b6021bfef970e52abc762b 115 Gene3D G3DSA:1.10.10.10 4 94 1.2E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0809 a91f028930b6021bfef970e52abc762b 115 SUPERFAMILY SSF46785 4 92 1.94E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0809 a91f028930b6021bfef970e52abc762b 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 48 63 3.9E-5 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YE0809 a91f028930b6021bfef970e52abc762b 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 3.9E-5 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YE0809 a91f028930b6021bfef970e52abc762b 115 PANTHER PTHR33154:SF2 5 104 2.2E-33 T 22-04-2016 YE0809 a91f028930b6021bfef970e52abc762b 115 Pfam PF12840 Helix-turn-helix domain 16 65 1.3E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0809 a91f028930b6021bfef970e52abc762b 115 SMART SM00418 15 92 2.4E-11 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YE0809 a91f028930b6021bfef970e52abc762b 115 PANTHER PTHR33154 5 104 2.2E-33 T 22-04-2016 YE0766 18bbfea28523a6839c7430c895041823 105 ProDom PD070788 MEMBRANE OXIDASE SUBUNIT CYTOCHROME YGBE INNER STY3057 TRANSMEMBRANE 1 105 3.0E-46 T 22-04-2016 IPR022721 Protein of unknown function DUF3561 YE0766 18bbfea28523a6839c7430c895041823 105 Pfam PF12084 Protein of unknown function (DUF3561) 3 104 4.1E-44 T 22-04-2016 IPR022721 Protein of unknown function DUF3561 YE1405 6f1480c9e9e7a490f8d2c6486a8f7d42 595 Pfam PF02743 Cache domain 33 254 3.1E-30 T 22-04-2016 IPR033479 Double Cache domain 1 YE1405 6f1480c9e9e7a490f8d2c6486a8f7d42 595 SMART SM00283 347 594 1.0E-85 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 YE1405 6f1480c9e9e7a490f8d2c6486a8f7d42 595 PANTHER PTHR32089 79 595 2.0E-220 T 22-04-2016 YE1405 6f1480c9e9e7a490f8d2c6486a8f7d42 595 SUPERFAMILY SSF58104 314 595 3.79E-70 T 22-04-2016 YE1405 6f1480c9e9e7a490f8d2c6486a8f7d42 595 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 403 593 2.0E-57 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 YE1405 6f1480c9e9e7a490f8d2c6486a8f7d42 595 SMART SM00304 292 346 3.9E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YE1405 6f1480c9e9e7a490f8d2c6486a8f7d42 595 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 271 291 1.7E-52 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE1405 6f1480c9e9e7a490f8d2c6486a8f7d42 595 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 474 503 1.7E-52 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE1405 6f1480c9e9e7a490f8d2c6486a8f7d42 595 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 522 551 1.7E-52 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE1405 6f1480c9e9e7a490f8d2c6486a8f7d42 595 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 445 472 1.7E-52 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE1405 6f1480c9e9e7a490f8d2c6486a8f7d42 595 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 368 397 1.7E-52 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE1405 6f1480c9e9e7a490f8d2c6486a8f7d42 595 Gene3D G3DSA:1.10.287.950 362 566 1.7E-56 T 22-04-2016 YE1405 6f1480c9e9e7a490f8d2c6486a8f7d42 595 Pfam PF00672 HAMP domain 273 342 5.6E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YE1405 6f1480c9e9e7a490f8d2c6486a8f7d42 595 PANTHER PTHR32089:SF63 79 595 2.0E-220 T 22-04-2016 YE1405 6f1480c9e9e7a490f8d2c6486a8f7d42 595 Gene3D G3DSA:3.30.450.20 134 269 3.9E-27 T 22-04-2016 YE1405 6f1480c9e9e7a490f8d2c6486a8f7d42 595 SUPERFAMILY SSF103190 93 177 5.49E-14 T 22-04-2016 IPR029151 Periplasmic sensor domain-like YE3704 58020d6eb66a50d955d3def9fd79f2d5 418 Gene3D G3DSA:1.10.3860.10 12 400 9.1E-82 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YE3704 58020d6eb66a50d955d3def9fd79f2d5 418 Pfam PF00375 Sodium:dicarboxylate symporter family 17 396 1.0E-62 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YE3704 58020d6eb66a50d955d3def9fd79f2d5 418 SUPERFAMILY SSF118215 17 399 8.5E-94 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YE3704 58020d6eb66a50d955d3def9fd79f2d5 418 PRINTS PR00173 Glutamate-aspartate symporter signature 351 371 9.9E-14 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YE3704 58020d6eb66a50d955d3def9fd79f2d5 418 PRINTS PR00173 Glutamate-aspartate symporter signature 289 315 9.9E-14 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YE3704 58020d6eb66a50d955d3def9fd79f2d5 418 PRINTS PR00173 Glutamate-aspartate symporter signature 187 206 9.9E-14 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YE3704 58020d6eb66a50d955d3def9fd79f2d5 418 PRINTS PR00173 Glutamate-aspartate symporter signature 324 343 9.9E-14 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YE3704 58020d6eb66a50d955d3def9fd79f2d5 418 PRINTS PR00173 Glutamate-aspartate symporter signature 15 35 9.9E-14 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YE3704 58020d6eb66a50d955d3def9fd79f2d5 418 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 5 406 36.209 T 22-04-2016 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 YE3704 58020d6eb66a50d955d3def9fd79f2d5 418 PANTHER PTHR11958:SF68 8 410 1.3E-259 T 22-04-2016 YE3704 58020d6eb66a50d955d3def9fd79f2d5 418 PANTHER PTHR11958 8 410 1.3E-259 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 YE3989 28eb3924c5e8fe6eb7267b88f58cec4e 108 SMART SM00450 7 102 1.9E-18 T 22-04-2016 IPR001763 Rhodanese-like domain YE3989 28eb3924c5e8fe6eb7267b88f58cec4e 108 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 106 34.044 T 22-04-2016 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 YE3989 28eb3924c5e8fe6eb7267b88f58cec4e 108 SUPERFAMILY SSF52821 2 100 8.38E-28 T 22-04-2016 IPR001763 Rhodanese-like domain YE3989 28eb3924c5e8fe6eb7267b88f58cec4e 108 Gene3D G3DSA:3.40.250.10 2 99 2.0E-29 T 22-04-2016 IPR001763 Rhodanese-like domain YE3989 28eb3924c5e8fe6eb7267b88f58cec4e 108 PANTHER PTHR12231 18 98 5.3E-14 T 22-04-2016 YE3989 28eb3924c5e8fe6eb7267b88f58cec4e 108 Pfam PF00581 Rhodanese-like domain 10 98 4.0E-14 T 22-04-2016 IPR001763 Rhodanese-like domain YE0039 c629922afb9b679a521b1e01fac47af5 228 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 5.9E-5 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE0039 c629922afb9b679a521b1e01fac47af5 228 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 5.9E-5 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE0039 c629922afb9b679a521b1e01fac47af5 228 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 5.9E-5 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE0039 c629922afb9b679a521b1e01fac47af5 228 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 204 2.9E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE0039 c629922afb9b679a521b1e01fac47af5 228 Gene3D G3DSA:1.10.10.10 146 210 1.1E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0039 c629922afb9b679a521b1e01fac47af5 228 Pfam PF08448 PAS fold 16 126 3.7E-7 T 22-04-2016 IPR013656 PAS fold-4 YE0039 c629922afb9b679a521b1e01fac47af5 228 SMART SM00421 148 205 2.2E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE0039 c629922afb9b679a521b1e01fac47af5 228 SUPERFAMILY SSF46894 139 210 4.08E-16 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YE0815 ea1bc7e443cdd35ddbf1298a6ac4c09e 319 Gene3D G3DSA:3.40.50.1360 54 317 2.1E-73 T 22-04-2016 YE0815 ea1bc7e443cdd35ddbf1298a6ac4c09e 319 Pfam PF04198 Putative sugar-binding domain 58 316 4.8E-70 T 22-04-2016 IPR007324 Sugar-binding domain, putative GO:0030246 YE0815 ea1bc7e443cdd35ddbf1298a6ac4c09e 319 Pfam PF13545 Crp-like helix-turn-helix domain 20 52 2.3E-6 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 YE0815 ea1bc7e443cdd35ddbf1298a6ac4c09e 319 PANTHER PTHR34294 2 316 3.5E-95 T 22-04-2016 YE0815 ea1bc7e443cdd35ddbf1298a6ac4c09e 319 Gene3D G3DSA:1.10.10.10 19 53 4.2E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0815 ea1bc7e443cdd35ddbf1298a6ac4c09e 319 SUPERFAMILY SSF46785 17 54 5.44E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0815 ea1bc7e443cdd35ddbf1298a6ac4c09e 319 PANTHER PTHR34294:SF2 2 316 3.5E-95 T 22-04-2016 YE0815 ea1bc7e443cdd35ddbf1298a6ac4c09e 319 SUPERFAMILY SSF100950 60 316 8.37E-62 T 22-04-2016 YE2184 718becbf37dcbbf15f1b192f654c75cb 338 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 250 326 2.8E-18 T 22-04-2016 IPR019491 Lipoate protein ligase, C-terminal UniPathway: UPA00537|UniPathway: UPA00537 YE2184 718becbf37dcbbf15f1b192f654c75cb 338 PANTHER PTHR12561:SF5 1 338 6.7E-251 T 22-04-2016 YE2184 718becbf37dcbbf15f1b192f654c75cb 338 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 4 326 7.9E-125 T 22-04-2016 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 UniPathway: UPA00537|UniPathway: UPA00537 YE2184 718becbf37dcbbf15f1b192f654c75cb 338 Gene3D G3DSA:3.90.1550.10 1 247 1.2E-84 T 22-04-2016 YE2184 718becbf37dcbbf15f1b192f654c75cb 338 SUPERFAMILY SSF82649 248 336 7.32E-22 T 22-04-2016 YE2184 718becbf37dcbbf15f1b192f654c75cb 338 PANTHER PTHR12561 1 338 6.7E-251 T 22-04-2016 YE2184 718becbf37dcbbf15f1b192f654c75cb 338 SUPERFAMILY SSF55681 4 247 1.16E-79 T 22-04-2016 YE2184 718becbf37dcbbf15f1b192f654c75cb 338 Gene3D G3DSA:3.30.390.50 249 314 2.7E-13 T 22-04-2016 YE2184 718becbf37dcbbf15f1b192f654c75cb 338 Pfam PF03099 Biotin/lipoate A/B protein ligase family 52 158 2.3E-8 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 YE2184 718becbf37dcbbf15f1b192f654c75cb 338 Hamap MF_01602 Lipoate-protein ligase A [lplA]. 1 338 57.926 T 22-04-2016 IPR023741 Lipoate-protein ligase A GO:0016979|GO:0018055 UniPathway: UPA00537|UniPathway: UPA00537 YE3700 a21ddf4f339afaf2221b1ac2a4b85b0f 635 Gene3D G3DSA:2.40.128.130 312 635 9.3E-76 T 22-04-2016 IPR005546 Autotransporter beta-domain YE3700 a21ddf4f339afaf2221b1ac2a4b85b0f 635 Pfam PF03797 Autotransporter beta-domain 355 618 4.4E-30 T 22-04-2016 IPR005546 Autotransporter beta-domain YE3700 a21ddf4f339afaf2221b1ac2a4b85b0f 635 PANTHER PTHR12338 312 635 2.0E-73 T 22-04-2016 YE3700 a21ddf4f339afaf2221b1ac2a4b85b0f 635 PANTHER PTHR12338:SF5 312 635 2.0E-73 T 22-04-2016 YE3700 a21ddf4f339afaf2221b1ac2a4b85b0f 635 SMART SM00869 354 624 2.7E-29 T 22-04-2016 IPR005546 Autotransporter beta-domain YE3700 a21ddf4f339afaf2221b1ac2a4b85b0f 635 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 287 635 3.9E-54 T 22-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 YE3700 a21ddf4f339afaf2221b1ac2a4b85b0f 635 SUPERFAMILY SSF103515 323 635 3.4E-40 T 22-04-2016 IPR005546 Autotransporter beta-domain YE1842 a11392cc6a8e6b4cdc775327f74058ca 294 PANTHER PTHR11440 8 120 3.6E-14 T 22-04-2016 YE1842 a11392cc6a8e6b4cdc775327f74058ca 294 SUPERFAMILY SSF53474 8 266 9.7E-42 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE1842 a11392cc6a8e6b4cdc775327f74058ca 294 Pfam PF00561 alpha/beta hydrolase fold 9 202 1.3E-12 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 YE1842 a11392cc6a8e6b4cdc775327f74058ca 294 Gene3D G3DSA:3.40.50.1820 8 293 8.4E-55 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE1948 5470b39421ac53ada8f55be58cb02a73 129 Pfam PF01042 Endoribonuclease L-PSP 15 126 1.2E-29 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family YE1948 5470b39421ac53ada8f55be58cb02a73 129 Gene3D G3DSA:3.30.1330.40 2 128 1.1E-33 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like YE1948 5470b39421ac53ada8f55be58cb02a73 129 SUPERFAMILY SSF55298 2 128 1.15E-35 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like YE1948 5470b39421ac53ada8f55be58cb02a73 129 TIGRFAM TIGR03610 RutC: pyrimidine utilization protein C 2 127 1.8E-72 T 22-04-2016 IPR019898 Putative aminoacrylate peracid reductase RutC YE1948 5470b39421ac53ada8f55be58cb02a73 129 PANTHER PTHR11803 1 129 7.7E-37 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family YE1948 5470b39421ac53ada8f55be58cb02a73 129 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 103 121 - T 22-04-2016 IPR019897 RidA, conserved site YE1948 5470b39421ac53ada8f55be58cb02a73 129 Hamap MF_00831 Putative aminoacrylate peracid reductase RutC [rutC]. 2 129 43.478 T 22-04-2016 IPR019898 Putative aminoacrylate peracid reductase RutC YE3974 77ac2f9041603c8c44b1af42a6385f58 362 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 355 3.0E-121 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 YE3974 77ac2f9041603c8c44b1af42a6385f58 362 PIRSF PIRSF001455 11 359 2.1E-106 T 22-04-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 YE3974 77ac2f9041603c8c44b1af42a6385f58 362 Gene3D G3DSA:3.40.50.1970 2 172 3.0E-67 T 22-04-2016 YE3974 77ac2f9041603c8c44b1af42a6385f58 362 Pfam PF01761 3-dehydroquinate synthase 67 326 2.5E-109 T 22-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 YE3974 77ac2f9041603c8c44b1af42a6385f58 362 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 359 43.511 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 YE3974 77ac2f9041603c8c44b1af42a6385f58 362 Gene3D G3DSA:1.20.1090.10 173 355 6.9E-67 T 22-04-2016 YE3974 77ac2f9041603c8c44b1af42a6385f58 362 PANTHER PTHR21090 1 361 4.9E-213 T 22-04-2016 YE3974 77ac2f9041603c8c44b1af42a6385f58 362 SUPERFAMILY SSF56796 4 357 4.32E-116 T 22-04-2016 YE0379 a93247bcbb26ec53e1ef54188823bd2c 427 Pfam PF01145 SPFH domain / Band 7 family 103 274 2.2E-31 T 22-04-2016 IPR001107 Band 7 domain YE0379 a93247bcbb26ec53e1ef54188823bd2c 427 PRINTS PR00721 Stomatin signature 153 174 1.9E-7 T 22-04-2016 IPR001972 Stomatin family GO:0016020 YE0379 a93247bcbb26ec53e1ef54188823bd2c 427 PRINTS PR00721 Stomatin signature 188 205 1.9E-7 T 22-04-2016 IPR001972 Stomatin family GO:0016020 YE0379 a93247bcbb26ec53e1ef54188823bd2c 427 PRINTS PR00721 Stomatin signature 106 128 1.9E-7 T 22-04-2016 IPR001972 Stomatin family GO:0016020 YE0379 a93247bcbb26ec53e1ef54188823bd2c 427 SUPERFAMILY SSF117892 132 263 6.8E-20 T 22-04-2016 IPR001107 Band 7 domain YE0379 a93247bcbb26ec53e1ef54188823bd2c 427 SMART SM00244 99 259 1.4E-41 T 22-04-2016 IPR001107 Band 7 domain YE0379 a93247bcbb26ec53e1ef54188823bd2c 427 PANTHER PTHR10264 13 394 9.1E-200 T 22-04-2016 IPR001972 Stomatin family GO:0016020 YE0379 a93247bcbb26ec53e1ef54188823bd2c 427 PANTHER PTHR10264:SF51 13 394 9.1E-200 T 22-04-2016 IPR010201 HflK GO:0016021 YE0379 a93247bcbb26ec53e1ef54188823bd2c 427 TIGRFAM TIGR01933 hflK: HflK protein 101 360 2.6E-120 T 22-04-2016 IPR010201 HflK GO:0016021 YE0379 a93247bcbb26ec53e1ef54188823bd2c 427 Pfam PF12221 Bacterial membrane protein N terminal 1 61 1.4E-14 T 22-04-2016 IPR020980 Menbrane protein HflK, N-terminal YE0173 4c2efb85739fb21aef5b4c13e031ecc6 355 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 327 1.4E-98 T 22-04-2016 IPR016040 NAD(P)-binding domain YE0173 4c2efb85739fb21aef5b4c13e031ecc6 355 PANTHER PTHR10366:SF41 3 354 3.8E-184 T 22-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 YE0173 4c2efb85739fb21aef5b4c13e031ecc6 355 SUPERFAMILY SSF51735 3 339 1.96E-94 T 22-04-2016 IPR016040 NAD(P)-binding domain YE0173 4c2efb85739fb21aef5b4c13e031ecc6 355 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 3 340 2.5E-159 T 22-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 YE0173 4c2efb85739fb21aef5b4c13e031ecc6 355 PANTHER PTHR10366 3 354 3.8E-184 T 22-04-2016 YE0173 4c2efb85739fb21aef5b4c13e031ecc6 355 Gene3D G3DSA:3.90.25.10 193 341 1.0E-56 T 22-04-2016 YE0173 4c2efb85739fb21aef5b4c13e031ecc6 355 Gene3D G3DSA:3.40.50.720 2 192 1.0E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain YE1939 d6e893c4ff62e176fad3df7f0996e91a 376 Pfam PF09375 Imelysin 137 368 1.5E-44 T 22-04-2016 YE1939 d6e893c4ff62e176fad3df7f0996e91a 376 Pfam PF13473 Cupredoxin-like domain 13 116 2.3E-24 T 22-04-2016 IPR028096 EfeO-type cupredoxin-like domain YE1939 d6e893c4ff62e176fad3df7f0996e91a 376 PANTHER PTHR39192 1 376 6.5E-171 T 22-04-2016 YE1939 d6e893c4ff62e176fad3df7f0996e91a 376 Gene3D G3DSA:2.60.40.420 16 117 3.7E-5 T 22-04-2016 IPR008972 Cupredoxin YE1939 d6e893c4ff62e176fad3df7f0996e91a 376 SUPERFAMILY SSF49503 15 116 2.95E-5 T 22-04-2016 IPR008972 Cupredoxin YE2952 7701e120a1522b38f26dd3cb5b924c3f 243 Pfam PF06149 Protein of unknown function (DUF969) 7 224 8.5E-88 T 22-04-2016 IPR010374 Protein of unknown function DUF969 YE2952 7701e120a1522b38f26dd3cb5b924c3f 243 PANTHER PTHR41293 2 243 1.2E-118 T 22-04-2016 YE2952 7701e120a1522b38f26dd3cb5b924c3f 243 PANTHER PTHR41293:SF1 2 243 1.2E-118 T 22-04-2016 YE1646 fc91a1199c2231c445e2766431c761b9 171 Pfam PF04985 Phage tail tube protein FII 4 170 6.2E-65 T 22-04-2016 IPR006498 Tail tube protein YE1646 fc91a1199c2231c445e2766431c761b9 171 PANTHER PTHR35861:SF2 1 171 1.5E-48 T 22-04-2016 YE1646 fc91a1199c2231c445e2766431c761b9 171 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 3 171 2.4E-47 T 22-04-2016 IPR006498 Tail tube protein YE1646 fc91a1199c2231c445e2766431c761b9 171 PANTHER PTHR35861 1 171 1.5E-48 T 22-04-2016 YE4059 5ab9953e3a40338e00a0ac7ae0847835 1081 Pfam PF03212 Pertactin 639 741 1.6E-13 T 22-04-2016 IPR004899 Pertactin, central region YE4059 5ab9953e3a40338e00a0ac7ae0847835 1081 PANTHER PTHR35037:SF1 1 1078 8.2E-280 T 22-04-2016 YE4059 5ab9953e3a40338e00a0ac7ae0847835 1081 PANTHER PTHR35037 1 1078 8.2E-280 T 22-04-2016 YE4059 5ab9953e3a40338e00a0ac7ae0847835 1081 Pfam PF03797 Autotransporter beta-domain 815 1065 9.0E-34 T 22-04-2016 IPR005546 Autotransporter beta-domain YE4059 5ab9953e3a40338e00a0ac7ae0847835 1081 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 639 1081 2.0E-98 T 22-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 YE4059 5ab9953e3a40338e00a0ac7ae0847835 1081 Gene3D G3DSA:2.160.20.20 290 765 4.4E-64 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like YE4059 5ab9953e3a40338e00a0ac7ae0847835 1081 Gene3D G3DSA:2.160.20.20 58 186 1.3E-6 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like YE4059 5ab9953e3a40338e00a0ac7ae0847835 1081 SMART SM00869 812 1069 6.8E-33 T 22-04-2016 IPR005546 Autotransporter beta-domain YE4059 5ab9953e3a40338e00a0ac7ae0847835 1081 Gene3D G3DSA:2.40.128.130 767 1081 7.3E-67 T 22-04-2016 IPR005546 Autotransporter beta-domain YE4059 5ab9953e3a40338e00a0ac7ae0847835 1081 SUPERFAMILY SSF103515 779 1081 6.93E-42 T 22-04-2016 IPR005546 Autotransporter beta-domain YE4059 5ab9953e3a40338e00a0ac7ae0847835 1081 SUPERFAMILY SSF51126 360 742 5.65E-35 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YE4059 5ab9953e3a40338e00a0ac7ae0847835 1081 SUPERFAMILY SSF51126 161 272 5.65E-35 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YE4059 5ab9953e3a40338e00a0ac7ae0847835 1081 SUPERFAMILY SSF51126 302 328 5.65E-35 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YE1624 fc8b3558213a51612e61d468a72e1a1f 81 Gene3D G3DSA:3.30.910.10 1 79 9.7E-33 T 22-04-2016 IPR010391 DNA damage-inducible protein DinI-like YE1624 fc8b3558213a51612e61d468a72e1a1f 81 PANTHER PTHR36572 1 81 7.0E-44 T 22-04-2016 YE1624 fc8b3558213a51612e61d468a72e1a1f 81 Pfam PF06183 DinI-like family 14 78 9.3E-29 T 22-04-2016 IPR010391 DNA damage-inducible protein DinI-like YE1624 fc8b3558213a51612e61d468a72e1a1f 81 PANTHER PTHR36572:SF2 1 81 7.0E-44 T 22-04-2016 YE1624 fc8b3558213a51612e61d468a72e1a1f 81 SUPERFAMILY SSF54857 1 80 1.96E-28 T 22-04-2016 IPR010391 DNA damage-inducible protein DinI-like YE1896 094b32c53dc33c9609f884dad5b3ea0a 289 Gene3D G3DSA:3.90.1200.10 96 260 7.0E-13 T 22-04-2016 YE1896 094b32c53dc33c9609f884dad5b3ea0a 289 PANTHER PTHR12149 1 289 1.2E-117 T 22-04-2016 YE1896 094b32c53dc33c9609f884dad5b3ea0a 289 SUPERFAMILY SSF56112 4 280 8.56E-39 T 22-04-2016 IPR011009 Protein kinase-like domain YE1896 094b32c53dc33c9609f884dad5b3ea0a 289 Pfam PF03881 Fructosamine kinase 1 285 2.1E-115 T 22-04-2016 IPR016477 Fructosamine/Ketosamine-3-kinase YE1896 094b32c53dc33c9609f884dad5b3ea0a 289 PANTHER PTHR12149:SF8 1 289 1.2E-117 T 22-04-2016 YE1896 094b32c53dc33c9609f884dad5b3ea0a 289 PIRSF PIRSF006221 1 287 4.2E-91 T 22-04-2016 IPR016477 Fructosamine/Ketosamine-3-kinase YE1896 094b32c53dc33c9609f884dad5b3ea0a 289 Gene3D G3DSA:3.30.200.20 31 90 2.2E-4 T 22-04-2016 YE3013 8cd0f5d6b1909721b782c193893b9a78 159 Pfam PF00313 'Cold-shock' DNA-binding domain 1 61 6.4E-10 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YE3013 8cd0f5d6b1909721b782c193893b9a78 159 SUPERFAMILY SSF50249 2 62 1.05E-10 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE3013 8cd0f5d6b1909721b782c193893b9a78 159 Gene3D G3DSA:2.40.50.140 1 66 8.4E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE2943 fc98e431050bf6c9861c59069bbc6091 407 PANTHER PTHR23151 4 407 2.7E-245 T 22-04-2016 YE2943 fc98e431050bf6c9861c59069bbc6091 407 SUPERFAMILY SSF51230 2 91 3.14E-24 T 22-04-2016 IPR011053 Single hybrid motif YE2943 fc98e431050bf6c9861c59069bbc6091 407 Pfam PF02817 e3 binding domain 114 146 1.1E-11 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 YE2943 fc98e431050bf6c9861c59069bbc6091 407 Gene3D G3DSA:2.40.50.100 1 96 1.4E-26 T 22-04-2016 YE2943 fc98e431050bf6c9861c59069bbc6091 407 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 407 1.6E-189 T 22-04-2016 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|UniPathway: UPA00868 YE2943 fc98e431050bf6c9861c59069bbc6091 407 Gene3D G3DSA:3.30.559.10 171 405 3.4E-91 T 22-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain YE2943 fc98e431050bf6c9861c59069bbc6091 407 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 177 405 4.2E-82 T 22-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 YE2943 fc98e431050bf6c9861c59069bbc6091 407 SUPERFAMILY SSF47005 111 151 1.7E-10 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 YE2943 fc98e431050bf6c9861c59069bbc6091 407 SUPERFAMILY SSF52777 177 406 1.69E-89 T 22-04-2016 YE2943 fc98e431050bf6c9861c59069bbc6091 407 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site YE2943 fc98e431050bf6c9861c59069bbc6091 407 Gene3D G3DSA:4.10.320.10 114 154 1.5E-18 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 YE2943 fc98e431050bf6c9861c59069bbc6091 407 Pfam PF00364 Biotin-requiring enzyme 5 77 2.5E-19 T 22-04-2016 IPR000089 Biotin/lipoyl attachment YE2943 fc98e431050bf6c9861c59069bbc6091 407 PANTHER PTHR23151:SF47 4 407 2.7E-245 T 22-04-2016 YE1699 0748b15c4b9811736b8842befc4878c4 596 Gene3D G3DSA:3.40.190.10 265 333 5.3E-7 T 22-04-2016 YE1699 0748b15c4b9811736b8842befc4878c4 596 PANTHER PTHR30290 22 81 1.7E-167 T 22-04-2016 YE1699 0748b15c4b9811736b8842befc4878c4 596 PANTHER PTHR30290 120 596 1.7E-167 T 22-04-2016 YE1699 0748b15c4b9811736b8842befc4878c4 596 Pfam PF12793 Sugar transport-related sRNA regulator N-term 5 117 7.7E-36 T 22-04-2016 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain YE1699 0748b15c4b9811736b8842befc4878c4 596 SUPERFAMILY SSF46785 10 85 4.67E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1699 0748b15c4b9811736b8842befc4878c4 596 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 165 309 3.9E-22 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain YE1699 0748b15c4b9811736b8842befc4878c4 596 Gene3D G3DSA:1.10.10.10 11 69 1.3E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1699 0748b15c4b9811736b8842befc4878c4 596 PANTHER PTHR30290:SF30 22 81 1.7E-167 T 22-04-2016 YE1699 0748b15c4b9811736b8842befc4878c4 596 PANTHER PTHR30290:SF30 120 596 1.7E-167 T 22-04-2016 YE1699 0748b15c4b9811736b8842befc4878c4 596 Gene3D G3DSA:3.90.76.10 132 264 9.4E-25 T 22-04-2016 YE1699 0748b15c4b9811736b8842befc4878c4 596 SUPERFAMILY SSF53850 121 593 7.06E-65 T 22-04-2016 YE1415 495df258cd976132b52940f60445ae23 246 SUPERFAMILY SSF53697 86 230 6.81E-31 T 22-04-2016 YE1415 495df258cd976132b52940f60445ae23 246 Pfam PF01380 SIS domain 108 222 5.7E-17 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 YE1415 495df258cd976132b52940f60445ae23 246 PANTHER PTHR10937 6 244 5.9E-71 T 22-04-2016 YE1415 495df258cd976132b52940f60445ae23 246 Gene3D G3DSA:1.10.10.10 7 60 1.5E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1415 495df258cd976132b52940f60445ae23 246 PANTHER PTHR10937:SF9 6 244 5.9E-71 T 22-04-2016 YE1415 495df258cd976132b52940f60445ae23 246 Gene3D G3DSA:3.40.50.10490 61 231 1.2E-29 T 22-04-2016 YE1415 495df258cd976132b52940f60445ae23 246 SUPERFAMILY SSF46689 6 72 1.06E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE1415 495df258cd976132b52940f60445ae23 246 Pfam PF01418 Helix-turn-helix domain, rpiR family 8 70 4.8E-16 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 YE1146 9b720d5a3950d709f97d606cf47c2399 234 PANTHER PTHR34385:SF1 2 71 4.1E-60 T 22-04-2016 YE1146 9b720d5a3950d709f97d606cf47c2399 234 PANTHER PTHR34385:SF1 90 223 4.1E-60 T 22-04-2016 YE1146 9b720d5a3950d709f97d606cf47c2399 234 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 25 181 2.0E-36 T 22-04-2016 IPR003709 Peptidase M15B GO:0006508|GO:0008233 YE1146 9b720d5a3950d709f97d606cf47c2399 234 SUPERFAMILY SSF55166 18 184 4.71E-20 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain YE1146 9b720d5a3950d709f97d606cf47c2399 234 PANTHER PTHR34385 2 71 4.1E-60 T 22-04-2016 YE1146 9b720d5a3950d709f97d606cf47c2399 234 PANTHER PTHR34385 90 223 4.1E-60 T 22-04-2016 YE0506 959df17d32bf27c0e0f9a3e8422b7570 122 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 59 112 1.2E-15 T 22-04-2016 IPR025528 BrnA antitoxin of type II toxin-antitoxin system YE0315 0b4bbe842571453e267e3dfe4c67af88 265 PANTHER PTHR33446:SF2 22 265 3.5E-13 T 22-04-2016 YE0315 0b4bbe842571453e267e3dfe4c67af88 265 Gene3D G3DSA:3.30.1150.10 164 264 1.8E-17 T 22-04-2016 YE0315 0b4bbe842571453e267e3dfe4c67af88 265 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 184 262 1.3E-11 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 YE0315 0b4bbe842571453e267e3dfe4c67af88 265 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 185 255 3.7E-14 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 YE0315 0b4bbe842571453e267e3dfe4c67af88 265 PANTHER PTHR33446 22 265 3.5E-13 T 22-04-2016 YE0315 0b4bbe842571453e267e3dfe4c67af88 265 SUPERFAMILY SSF74653 160 251 3.4E-18 T 22-04-2016 YE0367 f76ba77fc4e15dedc801b5bf67a00ae7 293 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 49 284 1.5E-93 T 22-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 YE0367 f76ba77fc4e15dedc801b5bf67a00ae7 293 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 10 287 49.132 T 22-04-2016 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 YE0367 f76ba77fc4e15dedc801b5bf67a00ae7 293 PANTHER PTHR10067 1 292 6.6E-117 T 22-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 YE0367 f76ba77fc4e15dedc801b5bf67a00ae7 293 Pfam PF02666 Phosphatidylserine decarboxylase 63 284 5.5E-60 T 22-04-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 YE1542 342cbc4f30d23b29c4c5169c961cb700 761 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 228 411 1.2E-37 T 22-04-2016 IPR004477 ComEC/Rec2-related protein YE1542 342cbc4f30d23b29c4c5169c961cb700 761 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 71 725 6.4E-179 T 22-04-2016 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 YE1542 342cbc4f30d23b29c4c5169c961cb700 761 Pfam PF03772 Competence protein 207 476 1.1E-53 T 22-04-2016 IPR004477 ComEC/Rec2-related protein YE1542 342cbc4f30d23b29c4c5169c961cb700 761 PANTHER PTHR30619:SF2 2 756 1.9E-225 T 22-04-2016 YE1542 342cbc4f30d23b29c4c5169c961cb700 761 Gene3D G3DSA:3.60.15.10 492 716 1.9E-30 T 22-04-2016 IPR001279 Metallo-beta-lactamase YE1542 342cbc4f30d23b29c4c5169c961cb700 761 PANTHER PTHR30619 2 756 1.9E-225 T 22-04-2016 YE1542 342cbc4f30d23b29c4c5169c961cb700 761 SMART SM00849 512 696 2.5E-11 T 22-04-2016 IPR001279 Metallo-beta-lactamase YE1542 342cbc4f30d23b29c4c5169c961cb700 761 Pfam PF00753 Metallo-beta-lactamase superfamily 512 687 5.3E-19 T 22-04-2016 IPR001279 Metallo-beta-lactamase YE1542 342cbc4f30d23b29c4c5169c961cb700 761 SUPERFAMILY SSF56281 502 749 1.19E-46 T 22-04-2016 IPR001279 Metallo-beta-lactamase YE1542 342cbc4f30d23b29c4c5169c961cb700 761 Pfam PF13567 Domain of unknown function (DUF4131) 15 160 6.5E-9 T 22-04-2016 IPR025405 Domain of unknown function DUF4131 YE1888 e9d230ed43a48478b2b1a174605dd86f 278 PANTHER PTHR38461 1 278 1.3E-179 T 22-04-2016 YE1888 e9d230ed43a48478b2b1a174605dd86f 278 SUPERFAMILY SSF51182 1 262 2.22E-106 T 22-04-2016 IPR011051 RmlC-like cupin domain YE1888 e9d230ed43a48478b2b1a174605dd86f 278 PIRSF PIRSF006625 1 278 3.6E-136 T 22-04-2016 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507|UniPathway: UPA00545 YE1888 e9d230ed43a48478b2b1a174605dd86f 278 Gene3D G3DSA:2.60.120.520 20 132 4.4E-56 T 22-04-2016 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal domain KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507|UniPathway: UPA00545 YE1888 e9d230ed43a48478b2b1a174605dd86f 278 Gene3D G3DSA:2.60.120.500 133 278 2.0E-77 T 22-04-2016 IPR027447 5-keto-4-deoxyuronate isomerase, C-terminal domain KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507|UniPathway: UPA00545 YE1888 e9d230ed43a48478b2b1a174605dd86f 278 Pfam PF04962 KduI/IolB family 67 272 2.5E-35 T 22-04-2016 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507|UniPathway: UPA00545 YE1888 e9d230ed43a48478b2b1a174605dd86f 278 Hamap MF_00687 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [kduI]. 1 278 55.874 T 22-04-2016 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507|UniPathway: UPA00545 YE4030 f5be54d2a3291929acfd9d6c1dcf36bb 274 TIGRFAM TIGR04378 myo_inos_iolB: 5-deoxy-glucuronate isomerase 19 264 6.4E-99 T 22-04-2016 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30|UniPathway: UPA00076 YE4030 f5be54d2a3291929acfd9d6c1dcf36bb 274 Gene3D G3DSA:2.60.120.10 16 121 1.5E-43 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YE4030 f5be54d2a3291929acfd9d6c1dcf36bb 274 Pfam PF04962 KduI/IolB family 10 264 2.5E-109 T 22-04-2016 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507|UniPathway: UPA00545 YE4030 f5be54d2a3291929acfd9d6c1dcf36bb 274 SUPERFAMILY SSF51182 16 253 7.56E-67 T 22-04-2016 IPR011051 RmlC-like cupin domain YE4030 f5be54d2a3291929acfd9d6c1dcf36bb 274 Gene3D G3DSA:2.60.120.10 122 267 5.7E-69 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YE4030 f5be54d2a3291929acfd9d6c1dcf36bb 274 PIRSF PIRSF036628 1 270 3.8E-111 T 22-04-2016 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30|UniPathway: UPA00076 YE4030 f5be54d2a3291929acfd9d6c1dcf36bb 274 PANTHER PTHR39193:SF1 1 266 4.4E-125 T 22-04-2016 YE4030 f5be54d2a3291929acfd9d6c1dcf36bb 274 PANTHER PTHR39193 1 266 4.4E-125 T 22-04-2016 YE1663 73f6160846f8017976650ea7f2cb7e0c 180 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 6 141 3.7E-58 T 22-04-2016 IPR006521 Tail protein I YE1663 73f6160846f8017976650ea7f2cb7e0c 180 Pfam PF09684 Phage tail protein (Tail_P2_I) 6 141 2.1E-50 T 22-04-2016 IPR006521 Tail protein I YE1100 c5a8711da75e7670ef0f1d91dbd2929c 467 PANTHER PTHR30217 259 466 8.3E-243 T 22-04-2016 YE1100 c5a8711da75e7670ef0f1d91dbd2929c 467 PANTHER PTHR30217 10 219 8.3E-243 T 22-04-2016 YE1100 c5a8711da75e7670ef0f1d91dbd2929c 467 Pfam PF01136 Peptidase family U32 89 357 3.1E-96 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- YE1100 c5a8711da75e7670ef0f1d91dbd2929c 467 ProSitePatterns PS01276 Peptidase family U32 signature. 175 193 - T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- YE1100 c5a8711da75e7670ef0f1d91dbd2929c 467 Pfam PF16325 Peptidase family U32 C-terminal domain 372 453 7.8E-22 T 22-04-2016 IPR032525 Peptidase family U32, C-terminal KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- YE1100 c5a8711da75e7670ef0f1d91dbd2929c 467 PANTHER PTHR30217:SF6 259 466 8.3E-243 T 22-04-2016 YE1100 c5a8711da75e7670ef0f1d91dbd2929c 467 PANTHER PTHR30217:SF6 10 219 8.3E-243 T 22-04-2016 YE0274 4d3cc340e2327cb05e056aa8f0676154 345 Gene3D G3DSA:3.30.43.10 6 71 2.5E-20 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 YE0274 4d3cc340e2327cb05e056aa8f0676154 345 PANTHER PTHR21071:SF6 4 340 2.3E-187 T 22-04-2016 YE0274 4d3cc340e2327cb05e056aa8f0676154 345 SUPERFAMILY SSF56176 7 198 2.15E-44 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 YE0274 4d3cc340e2327cb05e056aa8f0676154 345 SUPERFAMILY SSF56194 205 342 7.72E-52 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YE0274 4d3cc340e2327cb05e056aa8f0676154 345 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 209 332 5.9E-35 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YE0274 4d3cc340e2327cb05e056aa8f0676154 345 PANTHER PTHR21071 4 340 2.3E-187 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YE0274 4d3cc340e2327cb05e056aa8f0676154 345 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 8 332 6.4E-106 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YE0274 4d3cc340e2327cb05e056aa8f0676154 345 Gene3D G3DSA:3.90.78.10 233 343 3.1E-45 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YE0274 4d3cc340e2327cb05e056aa8f0676154 345 Gene3D G3DSA:3.30.465.10 75 232 1.1E-52 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 YE0274 4d3cc340e2327cb05e056aa8f0676154 345 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 345 87.759 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YE0274 4d3cc340e2327cb05e056aa8f0676154 345 Pfam PF01565 FAD binding domain 22 153 1.6E-24 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 YE1510 4904f084eb4059be9ead9029aeaf1d1a 550 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 548 2.4E-246 T 22-04-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 YE1510 4904f084eb4059be9ead9029aeaf1d1a 550 Gene3D G3DSA:3.40.50.2030 380 547 1.7E-69 T 22-04-2016 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 YE1510 4904f084eb4059be9ead9029aeaf1d1a 550 Gene3D G3DSA:3.40.50.2030 234 379 4.6E-65 T 22-04-2016 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 YE1510 4904f084eb4059be9ead9029aeaf1d1a 550 PANTHER PTHR30109 1 548 0.0 T 22-04-2016 YE1510 4904f084eb4059be9ead9029aeaf1d1a 550 Gene3D G3DSA:1.20.1270.20 1 158 3.8E-37 T 22-04-2016 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 YE1510 4904f084eb4059be9ead9029aeaf1d1a 550 PIRSF PIRSF000076 1 550 2.6E-241 T 22-04-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 YE1510 4904f084eb4059be9ead9029aeaf1d1a 550 PANTHER PTHR30109:SF0 1 548 0.0 T 22-04-2016 YE1510 4904f084eb4059be9ead9029aeaf1d1a 550 Pfam PF03063 Prismane/CO dehydrogenase family 1 545 4.7E-161 T 22-04-2016 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 YE1510 4904f084eb4059be9ead9029aeaf1d1a 550 SUPERFAMILY SSF56821 1 549 1.98E-188 T 22-04-2016 IPR011254 Prismane-like GO:0003824|GO:0016491|GO:0055114 YE1510 4904f084eb4059be9ead9029aeaf1d1a 550 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 549 20.819 T 22-04-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 YE1510 4904f084eb4059be9ead9029aeaf1d1a 550 Gene3D G3DSA:1.20.1270.20 159 232 9.6E-24 T 22-04-2016 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 YE3693 c2e5d2993475a0b5f94b1487c1c3b851 466 SUPERFAMILY SSF53383 8 450 4.53E-124 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YE3693 c2e5d2993475a0b5f94b1487c1c3b851 466 ProSitePatterns PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 269 290 - T 22-04-2016 IPR021115 Pyridoxal-phosphate binding site GO:0016831 YE3693 c2e5d2993475a0b5f94b1487c1c3b851 466 PANTHER PTHR11999 35 452 1.6E-193 T 22-04-2016 YE3693 c2e5d2993475a0b5f94b1487c1c3b851 466 Gene3D G3DSA:3.40.640.10 75 320 4.1E-25 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YE3693 c2e5d2993475a0b5f94b1487c1c3b851 466 PANTHER PTHR11999:SF94 35 452 1.6E-193 T 22-04-2016 YE3693 c2e5d2993475a0b5f94b1487c1c3b851 466 TIGRFAM TIGR01788 Glu-decarb-GAD: glutamate decarboxylase 16 448 4.2E-200 T 22-04-2016 IPR010107 Glutamate decarboxylase GO:0004351|GO:0006536|GO:0030170 KEGG: 00250+4.1.1.15|KEGG: 00410+4.1.1.15|KEGG: 00430+4.1.1.15|KEGG: 00650+4.1.1.15|MetaCyc: PWY-4321 YE3693 c2e5d2993475a0b5f94b1487c1c3b851 466 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 33 383 2.8E-105 T 22-04-2016 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 YE3702 548bc0a6e7ac278d45074f5fd6929bc3 333 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 118 8.3E-25 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 YE3702 548bc0a6e7ac278d45074f5fd6929bc3 333 SUPERFAMILY SSF55347 127 291 8.34E-22 T 22-04-2016 YE3702 548bc0a6e7ac278d45074f5fd6929bc3 333 Gene3D G3DSA:3.30.360.10 142 325 3.2E-63 T 22-04-2016 YE3702 548bc0a6e7ac278d45074f5fd6929bc3 333 PANTHER PTHR22604 1 316 2.1E-154 T 22-04-2016 YE3702 548bc0a6e7ac278d45074f5fd6929bc3 333 PANTHER PTHR22604:SF76 1 316 2.1E-154 T 22-04-2016 YE3702 548bc0a6e7ac278d45074f5fd6929bc3 333 Gene3D G3DSA:3.40.50.720 1 141 5.0E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3702 548bc0a6e7ac278d45074f5fd6929bc3 333 SUPERFAMILY SSF51735 2 152 6.31E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain YE0301 9b8e569d6c68a05b8f4544154bfd109b 233 Pfam PF08139 Prokaryotic membrane lipoprotein lipid attachment site 8 35 5.0E-6 T 22-04-2016 IPR012640 Membrane lipoprotein, lipid attachment site YE0301 9b8e569d6c68a05b8f4544154bfd109b 233 Pfam PF07356 Protein of unknown function (DUF1481) 44 229 1.3E-76 T 22-04-2016 IPR010858 Protein of unknown function DUF1481 YE0301 9b8e569d6c68a05b8f4544154bfd109b 233 PIRSF PIRSF006993 1 233 8.1E-111 T 22-04-2016 IPR016500 Uncharacterised conserved protein UCP006993 YE3675 cce4df31c65e0b758dc83070d1b0ddc7 441 SMART SM01118 2 202 2.0E-39 T 22-04-2016 IPR023577 CYTH domain YE3675 cce4df31c65e0b758dc83070d1b0ddc7 441 PANTHER PTHR39569 2 441 2.9E-143 T 22-04-2016 YE3675 cce4df31c65e0b758dc83070d1b0ddc7 441 Pfam PF01928 CYTH domain 4 196 9.5E-31 T 22-04-2016 IPR023577 CYTH domain YE3675 cce4df31c65e0b758dc83070d1b0ddc7 441 Gene3D G3DSA:2.40.320.10 1 203 1.7E-36 T 22-04-2016 IPR023577 CYTH domain YE3675 cce4df31c65e0b758dc83070d1b0ddc7 441 SUPERFAMILY SSF55154 1 206 6.38E-52 T 22-04-2016 IPR033469 CYTH-like domain YE3675 cce4df31c65e0b758dc83070d1b0ddc7 441 PANTHER PTHR39569:SF1 2 441 2.9E-143 T 22-04-2016 YE2084 d5877d5959be99e4e7457ea890391dc6 425 Gene3D G3DSA:1.10.287.130 191 257 2.3E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE2084 d5877d5959be99e4e7457ea890391dc6 425 SMART SM00304 148 200 1.5E-5 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YE2084 d5877d5959be99e4e7457ea890391dc6 425 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 309 413 4.5E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE2084 d5877d5959be99e4e7457ea890391dc6 425 Gene3D G3DSA:3.30.565.10 263 415 1.3E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE2084 d5877d5959be99e4e7457ea890391dc6 425 PANTHER PTHR24423:SF564 142 414 1.2E-133 T 22-04-2016 YE2084 d5877d5959be99e4e7457ea890391dc6 425 PANTHER PTHR24423:SF564 1 91 1.2E-133 T 22-04-2016 YE2084 d5877d5959be99e4e7457ea890391dc6 425 PANTHER PTHR24423 142 414 1.2E-133 T 22-04-2016 YE2084 d5877d5959be99e4e7457ea890391dc6 425 SMART SM00387 305 415 1.4E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE2084 d5877d5959be99e4e7457ea890391dc6 425 SUPERFAMILY SSF55874 250 413 3.27E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE2084 d5877d5959be99e4e7457ea890391dc6 425 SUPERFAMILY SSF47384 184 261 1.08E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE2084 d5877d5959be99e4e7457ea890391dc6 425 PRINTS PR00344 Bacterial sensor protein C-terminal signature 340 354 2.0E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE2084 d5877d5959be99e4e7457ea890391dc6 425 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 368 2.0E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE2084 d5877d5959be99e4e7457ea890391dc6 425 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 393 2.0E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE2084 d5877d5959be99e4e7457ea890391dc6 425 SMART SM00388 201 261 4.2E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 YE2084 d5877d5959be99e4e7457ea890391dc6 425 PANTHER PTHR24423 1 91 1.2E-133 T 22-04-2016 YE2084 d5877d5959be99e4e7457ea890391dc6 425 Pfam PF00672 HAMP domain 130 196 1.4E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YE3719 5d6bdfdd8d10247dfde10938150833db 332 PIRSF PIRSF015753 5 324 5.0E-132 T 22-04-2016 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 YE3719 5d6bdfdd8d10247dfde10938150833db 332 Gene3D G3DSA:3.40.30.10 39 178 2.4E-18 T 22-04-2016 IPR012336 Thioredoxin-like fold YE3719 5d6bdfdd8d10247dfde10938150833db 332 Pfam PF13409 Glutathione S-transferase, N-terminal domain 62 158 2.9E-22 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 YE3719 5d6bdfdd8d10247dfde10938150833db 332 Pfam PF13410 Glutathione S-transferase, C-terminal domain 204 256 1.5E-11 T 22-04-2016 YE3719 5d6bdfdd8d10247dfde10938150833db 332 PANTHER PTHR32419 1 324 1.4E-175 T 22-04-2016 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 YE3719 5d6bdfdd8d10247dfde10938150833db 332 Gene3D G3DSA:1.20.1050.10 179 288 5.0E-25 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like YE3719 5d6bdfdd8d10247dfde10938150833db 332 SUPERFAMILY SSF52833 126 162 3.69E-13 T 22-04-2016 IPR012336 Thioredoxin-like fold YE3719 5d6bdfdd8d10247dfde10938150833db 332 SUPERFAMILY SSF52833 42 99 3.69E-13 T 22-04-2016 IPR012336 Thioredoxin-like fold YE3719 5d6bdfdd8d10247dfde10938150833db 332 SUPERFAMILY SSF47616 176 325 1.95E-35 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like YE0618 31990eb21a8c8af11e4999698c4ba167 145 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 2 63 3.7E-11 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 YE0618 31990eb21a8c8af11e4999698c4ba167 145 Gene3D G3DSA:3.10.50.40 119 137 3.8E-15 T 22-04-2016 YE0618 31990eb21a8c8af11e4999698c4ba167 145 Gene3D G3DSA:3.10.50.40 2 69 3.8E-15 T 22-04-2016 YE0618 31990eb21a8c8af11e4999698c4ba167 145 PANTHER PTHR10516 122 143 2.9E-21 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type YE0618 31990eb21a8c8af11e4999698c4ba167 145 PANTHER PTHR10516 1 66 2.9E-21 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type YE0618 31990eb21a8c8af11e4999698c4ba167 145 SUPERFAMILY SSF54534 2 132 3.54E-32 T 22-04-2016 YE0618 31990eb21a8c8af11e4999698c4ba167 145 PANTHER PTHR10516:SF329 122 143 2.9E-21 T 22-04-2016 YE0618 31990eb21a8c8af11e4999698c4ba167 145 PANTHER PTHR10516:SF329 1 66 2.9E-21 T 22-04-2016 YE0314 8f9244396901cb867a788e3e6c087758 73 PANTHER PTHR33279 1 73 6.2E-27 T 22-04-2016 YE0314 8f9244396901cb867a788e3e6c087758 73 Pfam PF01206 Sulfurtransferase TusA 5 73 1.1E-19 T 22-04-2016 IPR001455 TusA-like domain YE0314 8f9244396901cb867a788e3e6c087758 73 SUPERFAMILY SSF64307 2 73 7.85E-24 T 22-04-2016 IPR001455 TusA-like domain YE0314 8f9244396901cb867a788e3e6c087758 73 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 6 30 - T 22-04-2016 IPR001455 TusA-like domain YE0314 8f9244396901cb867a788e3e6c087758 73 Gene3D G3DSA:3.30.110.40 2 73 1.0E-32 T 22-04-2016 IPR001455 TusA-like domain YE2368 97cae1b4ad7caedbbf079b3db26ed07e 90 Pfam PF05166 YcgL domain 3 75 1.5E-33 T 22-04-2016 IPR027354 YcgL domain YE2368 97cae1b4ad7caedbbf079b3db26ed07e 90 SUPERFAMILY SSF160191 1 87 1.7E-38 T 22-04-2016 YE2368 97cae1b4ad7caedbbf079b3db26ed07e 90 Hamap MF_01866 Protein YcgL [ycgL]. 1 88 27.677 T 22-04-2016 IPR027354 YcgL domain YE2368 97cae1b4ad7caedbbf079b3db26ed07e 90 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 83 4.0E-41 T 22-04-2016 IPR027354 YcgL domain YE2368 97cae1b4ad7caedbbf079b3db26ed07e 90 PANTHER PTHR38109 2 87 4.1E-39 T 22-04-2016 YE2810 044f63781a48eb0f5619f6c49c27862d 715 Gene3D G3DSA:2.20.25.90 3 54 2.2E-19 T 22-04-2016 YE2810 044f63781a48eb0f5619f6c49c27862d 715 Pfam PF00384 Molybdopterin oxidoreductase 61 485 2.7E-95 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 YE2810 044f63781a48eb0f5619f6c49c27862d 715 Gene3D G3DSA:3.40.50.740 61 147 6.9E-25 T 22-04-2016 YE2810 044f63781a48eb0f5619f6c49c27862d 715 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 6 23 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 YE2810 044f63781a48eb0f5619f6c49c27862d 715 Gene3D G3DSA:2.40.40.20 537 685 3.5E-46 T 22-04-2016 YE2810 044f63781a48eb0f5619f6c49c27862d 715 Gene3D G3DSA:3.40.50.740 318 536 1.0E-50 T 22-04-2016 YE2810 044f63781a48eb0f5619f6c49c27862d 715 SMART SM00926 1 54 1.8E-14 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 YE2810 044f63781a48eb0f5619f6c49c27862d 715 PANTHER PTHR11615:SF112 1 704 5.1E-240 T 22-04-2016 YE2810 044f63781a48eb0f5619f6c49c27862d 715 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 5 53 1.5E-13 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 YE2810 044f63781a48eb0f5619f6c49c27862d 715 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 6 683 4.0E-277 T 22-04-2016 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 YE2810 044f63781a48eb0f5619f6c49c27862d 715 SUPERFAMILY SSF50692 564 701 7.23E-42 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain YE2810 044f63781a48eb0f5619f6c49c27862d 715 PANTHER PTHR11615 1 704 5.1E-240 T 22-04-2016 YE2810 044f63781a48eb0f5619f6c49c27862d 715 Gene3D G3DSA:1.20.5.460 688 711 4.2E-5 T 22-04-2016 YE2810 044f63781a48eb0f5619f6c49c27862d 715 Gene3D G3DSA:3.40.228.10 148 317 3.1E-68 T 22-04-2016 YE2810 044f63781a48eb0f5619f6c49c27862d 715 Pfam PF01568 Molydopterin dinucleotide binding domain 574 681 1.5E-27 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 YE2810 044f63781a48eb0f5619f6c49c27862d 715 SUPERFAMILY SSF53706 5 561 1.1E-196 T 22-04-2016 YE3833 f2980add0a855e19494e9f2008655f94 341 SMART SM00062 36 265 1.3E-57 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YE3833 f2980add0a855e19494e9f2008655f94 341 SUPERFAMILY SSF53850 27 257 1.92E-48 T 22-04-2016 YE3833 f2980add0a855e19494e9f2008655f94 341 PANTHER PTHR30085:SF5 1 310 1.3E-184 T 22-04-2016 YE3833 f2980add0a855e19494e9f2008655f94 341 PANTHER PTHR30085 1 310 1.3E-184 T 22-04-2016 YE3833 f2980add0a855e19494e9f2008655f94 341 Gene3D G3DSA:3.40.190.10 15 143 2.6E-21 T 22-04-2016 YE3833 f2980add0a855e19494e9f2008655f94 341 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 254 8.7E-32 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YE3833 f2980add0a855e19494e9f2008655f94 341 Gene3D G3DSA:3.40.190.10 144 227 5.3E-12 T 22-04-2016 YE3833 f2980add0a855e19494e9f2008655f94 341 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 59 72 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 YE4127 428ca6a90891ae2c2ff74d44a767fdbc 409 SUPERFAMILY SSF103473 7 405 1.83E-51 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE4127 428ca6a90891ae2c2ff74d44a767fdbc 409 PANTHER PTHR23502:SF43 13 404 2.9E-293 T 22-04-2016 YE4127 428ca6a90891ae2c2ff74d44a767fdbc 409 PANTHER PTHR23502 13 404 2.9E-293 T 22-04-2016 YE4127 428ca6a90891ae2c2ff74d44a767fdbc 409 Gene3D G3DSA:1.20.1250.20 22 201 2.1E-25 T 22-04-2016 YE4127 428ca6a90891ae2c2ff74d44a767fdbc 409 Pfam PF07690 Major Facilitator Superfamily 25 364 1.1E-32 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YE3662 32742912c2280da213099f825a2cc099 275 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 206 261 9.0E-25 T 22-04-2016 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 YE3662 32742912c2280da213099f825a2cc099 275 SUPERFAMILY SSF56300 16 273 2.95E-61 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like YE3662 32742912c2280da213099f825a2cc099 275 Pfam PF00149 Calcineurin-like phosphoesterase 16 207 2.5E-19 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 YE3662 32742912c2280da213099f825a2cc099 275 PANTHER PTHR12905:SF7 51 275 2.5E-123 T 22-04-2016 YE3662 32742912c2280da213099f825a2cc099 275 PANTHER PTHR12905:SF7 8 35 2.5E-123 T 22-04-2016 YE3662 32742912c2280da213099f825a2cc099 275 PANTHER PTHR12905 51 275 2.5E-123 T 22-04-2016 YE3662 32742912c2280da213099f825a2cc099 275 PANTHER PTHR12905 8 35 2.5E-123 T 22-04-2016 YE3662 32742912c2280da213099f825a2cc099 275 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 15 261 40.275 T 22-04-2016 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 YE3662 32742912c2280da213099f825a2cc099 275 Gene3D G3DSA:3.60.21.10 14 253 2.5E-39 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like YE0254 9e7fba333e868d2d105197e4d54d25a3 176 Pfam PF09335 SNARE associated Golgi protein 41 164 6.4E-13 T 22-04-2016 IPR032816 SNARE associated Golgi protein YE0254 9e7fba333e868d2d105197e4d54d25a3 176 PANTHER PTHR30353 3 175 5.4E-61 T 22-04-2016 IPR032818 DedA family YE0254 9e7fba333e868d2d105197e4d54d25a3 176 PANTHER PTHR30353:SF5 3 175 5.4E-61 T 22-04-2016 YE1964 f040126f510edcb71edbe6f3c27a9e1b 890 Pfam PF00330 Aconitase family (aconitate hydratase) 69 562 1.5E-185 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YE1964 f040126f510edcb71edbe6f3c27a9e1b 890 Gene3D G3DSA:3.20.19.10 636 889 5.5E-83 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YE1964 f040126f510edcb71edbe6f3c27a9e1b 890 PRINTS PR00415 Aconitase family signature 279 292 6.1E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YE1964 f040126f510edcb71edbe6f3c27a9e1b 890 PRINTS PR00415 Aconitase family signature 493 506 6.1E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YE1964 f040126f510edcb71edbe6f3c27a9e1b 890 PRINTS PR00415 Aconitase family signature 431 442 6.1E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YE1964 f040126f510edcb71edbe6f3c27a9e1b 890 PRINTS PR00415 Aconitase family signature 372 386 6.1E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YE1964 f040126f510edcb71edbe6f3c27a9e1b 890 PRINTS PR00415 Aconitase family signature 203 216 6.1E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YE1964 f040126f510edcb71edbe6f3c27a9e1b 890 PRINTS PR00415 Aconitase family signature 293 306 6.1E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YE1964 f040126f510edcb71edbe6f3c27a9e1b 890 PRINTS PR00415 Aconitase family signature 146 159 6.1E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YE1964 f040126f510edcb71edbe6f3c27a9e1b 890 PRINTS PR00415 Aconitase family signature 170 178 6.1E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YE1964 f040126f510edcb71edbe6f3c27a9e1b 890 PRINTS PR00415 Aconitase family signature 217 232 6.1E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YE1964 f040126f510edcb71edbe6f3c27a9e1b 890 PANTHER PTHR11670:SF1 7 393 0.0 T 22-04-2016 YE1964 f040126f510edcb71edbe6f3c27a9e1b 890 PANTHER PTHR11670:SF1 416 650 0.0 T 22-04-2016 YE1964 f040126f510edcb71edbe6f3c27a9e1b 890 PANTHER PTHR11670:SF1 666 711 0.0 T 22-04-2016 YE1964 f040126f510edcb71edbe6f3c27a9e1b 890 PANTHER PTHR11670:SF1 750 890 0.0 T 22-04-2016 YE1964 f040126f510edcb71edbe6f3c27a9e1b 890 Gene3D G3DSA:3.30.499.10 28 249 4.0E-79 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YE1964 f040126f510edcb71edbe6f3c27a9e1b 890 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 19 890 0.0 T 22-04-2016 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 YE1964 f040126f510edcb71edbe6f3c27a9e1b 890 PANTHER PTHR11670 7 393 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YE1964 f040126f510edcb71edbe6f3c27a9e1b 890 PANTHER PTHR11670 416 650 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YE1964 f040126f510edcb71edbe6f3c27a9e1b 890 PANTHER PTHR11670 666 711 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YE1964 f040126f510edcb71edbe6f3c27a9e1b 890 PANTHER PTHR11670 750 890 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YE1964 f040126f510edcb71edbe6f3c27a9e1b 890 SUPERFAMILY SSF53732 11 626 4.45E-222 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YE1964 f040126f510edcb71edbe6f3c27a9e1b 890 Gene3D G3DSA:3.40.1060.10 250 367 1.6E-35 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YE1964 f040126f510edcb71edbe6f3c27a9e1b 890 ProSitePatterns PS01244 Aconitase family signature 2. 493 506 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YE1964 f040126f510edcb71edbe6f3c27a9e1b 890 Gene3D G3DSA:3.30.499.10 368 575 5.3E-64 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YE1964 f040126f510edcb71edbe6f3c27a9e1b 890 Pfam PF00694 Aconitase C-terminal domain 691 818 3.7E-49 T 22-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YE1964 f040126f510edcb71edbe6f3c27a9e1b 890 SUPERFAMILY SSF52016 629 890 5.69E-91 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YE1964 f040126f510edcb71edbe6f3c27a9e1b 890 ProSitePatterns PS00450 Aconitase family signature 1. 427 443 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YE3062 5efda25a73ddfdbfb61d8c0653f7a5a8 269 Pfam PF01963 TraB family 31 266 3.3E-38 T 22-04-2016 IPR002816 Pheromone shutdown, TraB YE3062 5efda25a73ddfdbfb61d8c0653f7a5a8 269 PANTHER PTHR40590 1 265 1.9E-106 T 22-04-2016 YE4042 b2eadea5613f91ed41ed9888dc0225dc 481 PIRSF PIRSF001495 1 481 1.6E-230 T 22-04-2016 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728|UniPathway: UPA00561 YE4042 b2eadea5613f91ed41ed9888dc0225dc 481 TIGRFAM TIGR01503 MthylAspMut_E: methylaspartate mutase, E subunit 3 481 7.3E-242 T 22-04-2016 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728|UniPathway: UPA00561 YE4042 b2eadea5613f91ed41ed9888dc0225dc 481 Gene3D G3DSA:3.20.20.240 1 416 9.8E-196 T 22-04-2016 IPR014348 Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain GO:0008152|GO:0016866|GO:0031419 YE4042 b2eadea5613f91ed41ed9888dc0225dc 481 SUPERFAMILY SSF51703 1 481 5.89E-200 T 22-04-2016 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 YE4042 b2eadea5613f91ed41ed9888dc0225dc 481 Hamap MF_01923 Glutamate mutase epsilon subunit [glmE]. 2 481 54.265 T 22-04-2016 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728|UniPathway: UPA00561 YE4042 b2eadea5613f91ed41ed9888dc0225dc 481 Pfam PF06368 Methylaspartate mutase E chain (MutE) 43 481 3.1E-212 T 22-04-2016 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728|UniPathway: UPA00561 YE4042 b2eadea5613f91ed41ed9888dc0225dc 481 Gene3D G3DSA:3.90.970.10 417 481 6.2E-31 T 22-04-2016 IPR014714 Glutamate mutase E subunit, C-terminal domain GO:0016866|GO:0019670|GO:0031419 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728|UniPathway: UPA00561 YE1921 3bfe14840878b2b74be7653b305a5053 310 PANTHER PTHR34611:SF3 1 310 3.3E-192 T 22-04-2016 YE1921 3bfe14840878b2b74be7653b305a5053 310 PANTHER PTHR34611 1 310 3.3E-192 T 22-04-2016 YE1921 3bfe14840878b2b74be7653b305a5053 310 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 7 308 3.5E-64 T 22-04-2016 IPR010106 Conserved hypothetical protein CHP01784 YE1921 3bfe14840878b2b74be7653b305a5053 310 Pfam PF04754 Putative transposase, YhgA-like 6 207 8.1E-86 T 22-04-2016 IPR006842 Transposase (putative), YhgA-like YE2873 24cd12221643a36a84b037f35537b3da 422 PANTHER PTHR30483 1 420 4.3E-226 T 22-04-2016 YE2873 24cd12221643a36a84b037f35537b3da 422 PANTHER PTHR30483:SF8 1 420 4.3E-226 T 22-04-2016 YE2873 24cd12221643a36a84b037f35537b3da 422 Gene3D G3DSA:3.40.50.2300 146 345 1.4E-73 T 22-04-2016 YE2873 24cd12221643a36a84b037f35537b3da 422 SUPERFAMILY SSF53822 30 408 1.98E-91 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YE2873 24cd12221643a36a84b037f35537b3da 422 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 31 404 2.8E-178 T 22-04-2016 IPR017777 ABC transporter, urea, substrate-binding, UrtA YE2873 24cd12221643a36a84b037f35537b3da 422 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 290 303 9.7E-6 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 YE2873 24cd12221643a36a84b037f35537b3da 422 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 31 47 9.7E-6 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 YE2873 24cd12221643a36a84b037f35537b3da 422 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 53 69 9.7E-6 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 YE2873 24cd12221643a36a84b037f35537b3da 422 Pfam PF13433 Periplasmic binding protein domain 31 406 2.4E-171 T 22-04-2016 YE2426 fb6a3ea8f26fb11cc2b9ed34348c543c 565 PANTHER PTHR11814:SF112 6 562 2.5E-262 T 22-04-2016 YE2426 fb6a3ea8f26fb11cc2b9ed34348c543c 565 Pfam PF00916 Sulfate permease family 29 414 3.1E-81 T 22-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 YE2426 fb6a3ea8f26fb11cc2b9ed34348c543c 565 TIGRFAM TIGR00815 sulP: sulfate permease 18 558 1.1E-130 T 22-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 YE2426 fb6a3ea8f26fb11cc2b9ed34348c543c 565 SUPERFAMILY SSF52091 453 562 1.06E-13 T 22-04-2016 IPR002645 STAS domain YE2426 fb6a3ea8f26fb11cc2b9ed34348c543c 565 Gene3D G3DSA:3.30.750.24 454 562 2.6E-10 T 22-04-2016 IPR002645 STAS domain YE2426 fb6a3ea8f26fb11cc2b9ed34348c543c 565 Pfam PF01740 STAS domain 458 558 2.4E-7 T 22-04-2016 IPR002645 STAS domain YE2426 fb6a3ea8f26fb11cc2b9ed34348c543c 565 PANTHER PTHR11814 6 562 2.5E-262 T 22-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 YE2426 fb6a3ea8f26fb11cc2b9ed34348c543c 565 ProSitePatterns PS01130 SLC26A transporters signature. 58 79 - T 22-04-2016 IPR018045 Sulphate anion transporter, conserved site GO:0008271|GO:0008272 YE2895 a18af0baa2be56f4e484276c84bd7f92 236 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 20 232 1.7E-62 T 22-04-2016 YE2895 a18af0baa2be56f4e484276c84bd7f92 236 PANTHER PTHR23291 2 236 4.9E-100 T 22-04-2016 IPR006214 Bax inhibitor 1-related YE2895 a18af0baa2be56f4e484276c84bd7f92 236 PANTHER PTHR23291:SF42 2 236 4.9E-100 T 22-04-2016 YE3289 4c75dc4d297435bf5ae51f03ad47f592 149 PANTHER PTHR19384:SF76 6 143 1.4E-25 T 22-04-2016 YE3289 4c75dc4d297435bf5ae51f03ad47f592 149 SUPERFAMILY SSF52218 1 148 1.61E-39 T 22-04-2016 IPR029039 Flavoprotein-like domain YE3289 4c75dc4d297435bf5ae51f03ad47f592 149 Gene3D G3DSA:3.40.50.360 1 147 1.6E-34 T 22-04-2016 IPR029039 Flavoprotein-like domain YE3289 4c75dc4d297435bf5ae51f03ad47f592 149 Pfam PF00258 Flavodoxin 6 130 3.2E-22 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 YE3289 4c75dc4d297435bf5ae51f03ad47f592 149 PANTHER PTHR19384 6 143 1.4E-25 T 22-04-2016 YE3289 4c75dc4d297435bf5ae51f03ad47f592 149 PRINTS PR00369 Flavodoxin signature 108 127 6.6E-7 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 YE3289 4c75dc4d297435bf5ae51f03ad47f592 149 PRINTS PR00369 Flavodoxin signature 53 64 6.6E-7 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 YE3289 4c75dc4d297435bf5ae51f03ad47f592 149 PRINTS PR00369 Flavodoxin signature 84 94 6.6E-7 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 YE0714 ae8a786e3e36d6c7649d5df4d53b5105 220 SMART SM00947 30 193 1.8E-66 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 YE0714 ae8a786e3e36d6c7649d5df4d53b5105 220 Gene3D G3DSA:3.40.1050.10 1 215 1.4E-74 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 YE0714 ae8a786e3e36d6c7649d5df4d53b5105 220 PANTHER PTHR11002 1 208 2.0E-135 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 YE0714 ae8a786e3e36d6c7649d5df4d53b5105 220 SUPERFAMILY SSF53056 1 213 1.83E-71 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 YE0714 ae8a786e3e36d6c7649d5df4d53b5105 220 Pfam PF00484 Carbonic anhydrase 38 189 6.3E-50 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 YE0714 ae8a786e3e36d6c7649d5df4d53b5105 220 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 22-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 YE0714 ae8a786e3e36d6c7649d5df4d53b5105 220 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 22-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 YE0714 ae8a786e3e36d6c7649d5df4d53b5105 220 PANTHER PTHR11002:SF11 1 208 2.0E-135 T 22-04-2016 YE2246 41765cc6201d1eacee2e7cd4cfe13425 154 Pfam PF02810 SEC-C motif 3 19 1.8E-5 T 22-04-2016 IPR004027 SEC-C motif YE2246 41765cc6201d1eacee2e7cd4cfe13425 154 Pfam PF02810 SEC-C motif 136 154 1.4E-10 T 22-04-2016 IPR004027 SEC-C motif YE2246 41765cc6201d1eacee2e7cd4cfe13425 154 PANTHER PTHR33747 2 154 3.0E-37 T 22-04-2016 YE2246 41765cc6201d1eacee2e7cd4cfe13425 154 PANTHER PTHR33747:SF1 2 154 3.0E-37 T 22-04-2016 YE2246 41765cc6201d1eacee2e7cd4cfe13425 154 Gene3D G3DSA:3.10.450.50 2 154 4.9E-57 T 22-04-2016 IPR032710 NTF2-like domain YE2246 41765cc6201d1eacee2e7cd4cfe13425 154 SUPERFAMILY SSF54427 26 130 1.0E-35 T 22-04-2016 IPR032710 NTF2-like domain YE2246 41765cc6201d1eacee2e7cd4cfe13425 154 SUPERFAMILY SSF103642 134 153 1.01E-7 T 22-04-2016 YE2246 41765cc6201d1eacee2e7cd4cfe13425 154 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 1 130 28.536 T 22-04-2016 IPR023006 Uncharacterised protein family UPF0225 YE0973 d12ef2578940c79b1d4d2241355c42e4 483 SUPERFAMILY SSF52091 394 469 5.69E-10 T 22-04-2016 IPR002645 STAS domain YE0973 d12ef2578940c79b1d4d2241355c42e4 483 Gene3D G3DSA:3.30.750.24 396 468 4.3E-8 T 22-04-2016 IPR002645 STAS domain YE0973 d12ef2578940c79b1d4d2241355c42e4 483 Pfam PF01740 STAS domain 403 468 4.4E-6 T 22-04-2016 IPR002645 STAS domain YE0973 d12ef2578940c79b1d4d2241355c42e4 483 PANTHER PTHR11814:SF76 2 471 1.6E-184 T 22-04-2016 YE0973 d12ef2578940c79b1d4d2241355c42e4 483 PANTHER PTHR11814 2 471 1.6E-184 T 22-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 YE0973 d12ef2578940c79b1d4d2241355c42e4 483 Pfam PF00916 Sulfate permease family 15 142 2.9E-17 T 22-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 YE0973 d12ef2578940c79b1d4d2241355c42e4 483 Pfam PF00916 Sulfate permease family 148 354 5.4E-25 T 22-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 YE1708 b104660a010413878a108b480eedc50a 179 PANTHER PTHR35603 1 177 1.6E-97 T 22-04-2016 YE1708 b104660a010413878a108b480eedc50a 179 Pfam PF05433 Glycine zipper 2TM domain 73 113 2.8E-10 T 22-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 YE1708 b104660a010413878a108b480eedc50a 179 PANTHER PTHR35603:SF2 1 177 1.6E-97 T 22-04-2016 YE3075 0e55bb7b93f08f8a75cff990bb03fa39 372 PANTHER PTHR10366:SF32 309 372 2.0E-217 T 22-04-2016 YE3075 0e55bb7b93f08f8a75cff990bb03fa39 372 PANTHER PTHR10366:SF32 3 281 2.0E-217 T 22-04-2016 YE3075 0e55bb7b93f08f8a75cff990bb03fa39 372 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 2 352 9.5E-180 T 22-04-2016 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|UniPathway: UPA00128 YE3075 0e55bb7b93f08f8a75cff990bb03fa39 372 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 2 355 56.368 T 22-04-2016 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|UniPathway: UPA00128 YE3075 0e55bb7b93f08f8a75cff990bb03fa39 372 PANTHER PTHR10366 309 372 2.0E-217 T 22-04-2016 YE3075 0e55bb7b93f08f8a75cff990bb03fa39 372 PANTHER PTHR10366 3 281 2.0E-217 T 22-04-2016 YE3075 0e55bb7b93f08f8a75cff990bb03fa39 372 Gene3D G3DSA:3.90.25.10 202 246 4.1E-52 T 22-04-2016 YE3075 0e55bb7b93f08f8a75cff990bb03fa39 372 Gene3D G3DSA:3.90.25.10 303 361 4.1E-52 T 22-04-2016 YE3075 0e55bb7b93f08f8a75cff990bb03fa39 372 SUPERFAMILY SSF51735 2 350 6.23E-91 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3075 0e55bb7b93f08f8a75cff990bb03fa39 372 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 345 8.1E-162 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3075 0e55bb7b93f08f8a75cff990bb03fa39 372 Gene3D G3DSA:3.40.50.720 2 201 4.0E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2247 09cd0b35947d249a1c28ab437e3fbab1 282 Gene3D G3DSA:3.30.70.260 7 74 1.0E-11 T 22-04-2016 YE2247 09cd0b35947d249a1c28ab437e3fbab1 282 Gene3D G3DSA:3.40.50.170 87 279 5.8E-57 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YE2247 09cd0b35947d249a1c28ab437e3fbab1 282 SUPERFAMILY SSF53328 88 281 8.37E-61 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YE2247 09cd0b35947d249a1c28ab437e3fbab1 282 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 6 282 46.068 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 YE2247 09cd0b35947d249a1c28ab437e3fbab1 282 Pfam PF01842 ACT domain 10 70 5.1E-7 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 YE2247 09cd0b35947d249a1c28ab437e3fbab1 282 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 10 282 6.9E-130 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 YE2247 09cd0b35947d249a1c28ab437e3fbab1 282 SUPERFAMILY SSF55021 9 58 2.46E-8 T 22-04-2016 YE2247 09cd0b35947d249a1c28ab437e3fbab1 282 PIRSF PIRSF036480 6 282 3.5E-115 T 22-04-2016 YE2247 09cd0b35947d249a1c28ab437e3fbab1 282 PANTHER PTHR10520 15 276 2.2E-136 T 22-04-2016 YE2247 09cd0b35947d249a1c28ab437e3fbab1 282 Pfam PF00551 Formyl transferase 88 264 3.5E-53 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 YE2247 09cd0b35947d249a1c28ab437e3fbab1 282 PANTHER PTHR10520:SF7 15 276 2.2E-136 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 YE2247 09cd0b35947d249a1c28ab437e3fbab1 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 43 55 3.5E-68 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 YE2247 09cd0b35947d249a1c28ab437e3fbab1 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 256 281 3.5E-68 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 YE2247 09cd0b35947d249a1c28ab437e3fbab1 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 110 137 3.5E-68 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 YE2247 09cd0b35947d249a1c28ab437e3fbab1 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 88 110 3.5E-68 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 YE2247 09cd0b35947d249a1c28ab437e3fbab1 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 11 37 3.5E-68 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 YE2247 09cd0b35947d249a1c28ab437e3fbab1 282 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 234 256 3.5E-68 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 YE1120 f1c918d513b82b1ef086c1febd1cdeb9 689 PANTHER PTHR30218 1 688 0.0 T 22-04-2016 YE1120 f1c918d513b82b1ef086c1febd1cdeb9 689 Pfam PF02503 Polyphosphate kinase middle domain 119 318 7.7E-42 T 22-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 YE1120 f1c918d513b82b1ef086c1febd1cdeb9 689 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 677 3.0E-256 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 YE1120 f1c918d513b82b1ef086c1febd1cdeb9 689 Hamap MF_00347 Polyphosphate kinase [ppk]. 4 681 34.375 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 YE1120 f1c918d513b82b1ef086c1febd1cdeb9 689 PANTHER PTHR30218:SF0 1 688 0.0 T 22-04-2016 YE1120 f1c918d513b82b1ef086c1febd1cdeb9 689 Gene3D G3DSA:3.30.870.10 500 682 2.0E-68 T 22-04-2016 YE1120 f1c918d513b82b1ef086c1febd1cdeb9 689 Pfam PF13090 Polyphosphate kinase C-terminal domain 331 676 1.0E-143 T 22-04-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 YE1120 f1c918d513b82b1ef086c1febd1cdeb9 689 Gene3D G3DSA:3.30.1840.10 106 300 4.9E-52 T 22-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 YE1120 f1c918d513b82b1ef086c1febd1cdeb9 689 Gene3D G3DSA:3.30.870.10 317 499 2.8E-74 T 22-04-2016 YE1120 f1c918d513b82b1ef086c1febd1cdeb9 689 SUPERFAMILY SSF56024 316 497 2.98E-55 T 22-04-2016 YE1120 f1c918d513b82b1ef086c1febd1cdeb9 689 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 109 2.4E-31 T 22-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 YE1120 f1c918d513b82b1ef086c1febd1cdeb9 689 PIRSF PIRSF015589 1 688 1.1E-240 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 YE1120 f1c918d513b82b1ef086c1febd1cdeb9 689 SUPERFAMILY SSF140356 3 105 3.01E-34 T 22-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 YE1120 f1c918d513b82b1ef086c1febd1cdeb9 689 SUPERFAMILY SSF56024 500 682 1.61E-68 T 22-04-2016 YE1120 f1c918d513b82b1ef086c1febd1cdeb9 689 SUPERFAMILY SSF143724 107 313 1.57E-59 T 22-04-2016 YE4023 659344f9e12fb671bc2a2d8b76e9b8cb 231 PANTHER PTHR13903 1 231 1.2E-126 T 22-04-2016 IPR012093 Pirin YE4023 659344f9e12fb671bc2a2d8b76e9b8cb 231 Gene3D G3DSA:2.60.120.10 4 230 2.9E-70 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YE4023 659344f9e12fb671bc2a2d8b76e9b8cb 231 Pfam PF02678 Pirin 7 119 1.3E-37 T 22-04-2016 IPR003829 Pirin, N-terminal domain YE4023 659344f9e12fb671bc2a2d8b76e9b8cb 231 PIRSF PIRSF006232 1 230 1.0E-55 T 22-04-2016 IPR012093 Pirin YE4023 659344f9e12fb671bc2a2d8b76e9b8cb 231 SUPERFAMILY SSF51182 1 231 2.83E-79 T 22-04-2016 IPR011051 RmlC-like cupin domain YE4023 659344f9e12fb671bc2a2d8b76e9b8cb 231 PANTHER PTHR13903:SF7 1 231 1.2E-126 T 22-04-2016 YE3697 c8018a27da426f03089d0c976e2a9f7e 299 Pfam PF00892 EamA-like transporter family 7 131 2.2E-13 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YE3697 c8018a27da426f03089d0c976e2a9f7e 299 Pfam PF00892 EamA-like transporter family 141 278 3.5E-14 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YE3697 c8018a27da426f03089d0c976e2a9f7e 299 SUPERFAMILY SSF103481 202 283 1.96E-8 T 22-04-2016 YE3697 c8018a27da426f03089d0c976e2a9f7e 299 PANTHER PTHR32322:SF9 5 286 4.5E-63 T 22-04-2016 YE3697 c8018a27da426f03089d0c976e2a9f7e 299 PANTHER PTHR32322 5 286 4.5E-63 T 22-04-2016 YE3697 c8018a27da426f03089d0c976e2a9f7e 299 SUPERFAMILY SSF103481 42 131 9.81E-10 T 22-04-2016 YE0941 8a1524d8446b39e842803626d9da775e 319 Pfam PF12833 Helix-turn-helix domain 238 315 3.3E-19 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YE0941 8a1524d8446b39e842803626d9da775e 319 Gene3D G3DSA:1.10.10.60 218 268 6.4E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE0941 8a1524d8446b39e842803626d9da775e 319 Gene3D G3DSA:1.10.10.60 269 316 1.9E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE0941 8a1524d8446b39e842803626d9da775e 319 Pfam PF01965 DJ-1/PfpI family 42 174 6.2E-19 T 22-04-2016 IPR002818 DJ-1/PfpI YE0941 8a1524d8446b39e842803626d9da775e 319 PANTHER PTHR11019 19 317 2.7E-88 T 22-04-2016 YE0941 8a1524d8446b39e842803626d9da775e 319 PANTHER PTHR11019:SF68 19 317 2.7E-88 T 22-04-2016 YE0941 8a1524d8446b39e842803626d9da775e 319 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 267 309 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 YE0941 8a1524d8446b39e842803626d9da775e 319 SUPERFAMILY SSF46689 215 264 6.27E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE0941 8a1524d8446b39e842803626d9da775e 319 SMART SM00342 230 313 5.9E-24 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YE0941 8a1524d8446b39e842803626d9da775e 319 SUPERFAMILY SSF46689 267 317 1.3E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE0941 8a1524d8446b39e842803626d9da775e 319 SUPERFAMILY SSF52317 8 196 4.23E-47 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YE0941 8a1524d8446b39e842803626d9da775e 319 Gene3D G3DSA:3.40.50.880 8 217 1.0E-51 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YE0105 2f14bcd43efe146f2c42422ba5a62d28 174 SUPERFAMILY SSF56235 2 172 5.7E-58 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal YE0105 2f14bcd43efe146f2c42422ba5a62d28 174 Gene3D G3DSA:3.60.20.10 2 172 6.9E-85 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal YE0105 2f14bcd43efe146f2c42422ba5a62d28 174 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 41.776 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 YE0105 2f14bcd43efe146f2c42422ba5a62d28 174 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 1.7E-86 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 YE0105 2f14bcd43efe146f2c42422ba5a62d28 174 PANTHER PTHR32194 2 174 1.8E-128 T 22-04-2016 YE0105 2f14bcd43efe146f2c42422ba5a62d28 174 PIRSF PIRSF039093 1 174 1.6E-87 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 YE0105 2f14bcd43efe146f2c42422ba5a62d28 174 Pfam PF00227 Proteasome subunit 2 165 1.8E-21 T 22-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 YE1596 72bd6afd10aef52d54ff9e9e76629bbf 92 Gene3D G3DSA:3.30.70.100 4 91 1.3E-29 T 22-04-2016 YE1596 72bd6afd10aef52d54ff9e9e76629bbf 92 PRINTS PR00112 Acylphosphatase signature 61 81 3.3E-5 T 22-04-2016 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 YE1596 72bd6afd10aef52d54ff9e9e76629bbf 92 PRINTS PR00112 Acylphosphatase signature 26 51 3.3E-5 T 22-04-2016 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 YE1596 72bd6afd10aef52d54ff9e9e76629bbf 92 PRINTS PR00112 Acylphosphatase signature 5 20 3.3E-5 T 22-04-2016 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 YE1596 72bd6afd10aef52d54ff9e9e76629bbf 92 Hamap MF_01450 Acylphosphatase [yccX]. 2 91 30.217 T 22-04-2016 IPR028627 Acylphosphatase, bacteria GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 YE1596 72bd6afd10aef52d54ff9e9e76629bbf 92 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 22-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 YE1596 72bd6afd10aef52d54ff9e9e76629bbf 92 Pfam PF00708 Acylphosphatase 6 91 3.8E-25 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 YE1596 72bd6afd10aef52d54ff9e9e76629bbf 92 PANTHER PTHR10029 4 92 9.8E-33 T 22-04-2016 YE1596 72bd6afd10aef52d54ff9e9e76629bbf 92 ProSitePatterns PS00151 Acylphosphatase signature 2. 34 50 - T 22-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 YE1596 72bd6afd10aef52d54ff9e9e76629bbf 92 SUPERFAMILY SSF54975 3 92 1.11E-29 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 YE0033 6d556f79fd083e981d210b62b5f02d94 307 PANTHER PTHR23091 1 178 6.1E-98 T 22-04-2016 YE0033 6d556f79fd083e981d210b62b5f02d94 307 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 158 297 4.6E-50 T 22-04-2016 IPR012660 Thioesterase, putative YE0033 6d556f79fd083e981d210b62b5f02d94 307 Gene3D G3DSA:3.40.630.30 8 144 8.5E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE0033 6d556f79fd083e981d210b62b5f02d94 307 Pfam PF00583 Acetyltransferase (GNAT) family 50 122 3.7E-12 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YE0033 6d556f79fd083e981d210b62b5f02d94 307 PANTHER PTHR23091:SF249 1 178 6.1E-98 T 22-04-2016 YE0033 6d556f79fd083e981d210b62b5f02d94 307 SUPERFAMILY SSF54637 155 297 3.31E-43 T 22-04-2016 IPR029069 HotDog domain YE0033 6d556f79fd083e981d210b62b5f02d94 307 Gene3D G3DSA:3.10.129.10 146 298 3.5E-65 T 22-04-2016 IPR029069 HotDog domain YE0033 6d556f79fd083e981d210b62b5f02d94 307 SUPERFAMILY SSF55729 2 159 9.79E-28 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE0033 6d556f79fd083e981d210b62b5f02d94 307 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 165 298 2.4E-49 T 22-04-2016 IPR012660 Thioesterase, putative YE0881 96af4122309cb8b86f2bcc72dc612a92 394 Pfam PF04865 Baseplate J-like protein 82 327 1.4E-32 T 22-04-2016 IPR006949 Baseplate protein J-like YE0283 c5f6274d8b3797f7050f8f13ec8e77f0 167 PANTHER PTHR11560 1 164 6.2E-62 T 22-04-2016 YE0283 c5f6274d8b3797f7050f8f13ec8e77f0 167 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 22-04-2016 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0283 c5f6274d8b3797f7050f8f13ec8e77f0 167 Pfam PF00466 Ribosomal protein L10 6 101 1.1E-26 T 22-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 YE0283 c5f6274d8b3797f7050f8f13ec8e77f0 167 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 162 26.765 T 22-04-2016 IPR022973 Ribosomal protein L10 YE0283 c5f6274d8b3797f7050f8f13ec8e77f0 167 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 78 157 4.0E-4 T 22-04-2016 YE0283 c5f6274d8b3797f7050f8f13ec8e77f0 167 SUPERFAMILY SSF160369 4 162 5.89E-49 T 22-04-2016 YE2806 41af51dc7825852e50cfb81959bd3d1a 268 Gene3D G3DSA:3.40.50.700 40 163 5.8E-27 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 YE2806 41af51dc7825852e50cfb81959bd3d1a 268 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 51 159 5.2E-23 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 YE2806 41af51dc7825852e50cfb81959bd3d1a 268 SUPERFAMILY SSF56770 39 170 2.09E-48 T 22-04-2016 YE2806 41af51dc7825852e50cfb81959bd3d1a 268 PANTHER PTHR11995:SF20 36 206 9.7E-95 T 22-04-2016 YE2806 41af51dc7825852e50cfb81959bd3d1a 268 PANTHER PTHR11995 36 206 9.7E-95 T 22-04-2016 YE2806 41af51dc7825852e50cfb81959bd3d1a 268 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 134 150 - T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 YE3107 7db8c1721dd6445259ea2c66eb80bc2a 86 PANTHER PTHR33280:SF3 1 81 1.1E-40 T 22-04-2016 YE3107 7db8c1721dd6445259ea2c66eb80bc2a 86 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 79 2.5E-16 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3107 7db8c1721dd6445259ea2c66eb80bc2a 86 PANTHER PTHR33280 1 81 1.1E-40 T 22-04-2016 YE3107 7db8c1721dd6445259ea2c66eb80bc2a 86 PRINTS PR01249 Ribosomal protein L31 signature 44 59 2.4E-14 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3107 7db8c1721dd6445259ea2c66eb80bc2a 86 PRINTS PR01249 Ribosomal protein L31 signature 59 77 2.4E-14 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3107 7db8c1721dd6445259ea2c66eb80bc2a 86 PRINTS PR01249 Ribosomal protein L31 signature 2 19 2.4E-14 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3107 7db8c1721dd6445259ea2c66eb80bc2a 86 SUPERFAMILY SSF143800 1 80 3.88E-22 T 22-04-2016 YE3107 7db8c1721dd6445259ea2c66eb80bc2a 86 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 26.024 T 22-04-2016 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3107 7db8c1721dd6445259ea2c66eb80bc2a 86 Pfam PF01197 Ribosomal protein L31 1 78 1.2E-24 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0199 2d980fa0286ebb89048fe6f9ecc733f7 276 Gene3D G3DSA:3.20.20.70 1 252 3.7E-134 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YE0199 2d980fa0286ebb89048fe6f9ecc733f7 276 Gene3D G3DSA:1.20.5.460 253 276 3.8E-4 T 22-04-2016 YE0199 2d980fa0286ebb89048fe6f9ecc733f7 276 SUPERFAMILY SSF51621 3 197 1.32E-85 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YE0199 2d980fa0286ebb89048fe6f9ecc733f7 276 PIRSF PIRSF034452 1 276 1.1E-164 T 22-04-2016 IPR009215 TIM-barrel domain, IGPS-like YE0199 2d980fa0286ebb89048fe6f9ecc733f7 276 Pfam PF09370 Phosphoenolpyruvate hydrolase-like 9 274 1.9E-134 T 22-04-2016 IPR009215 TIM-barrel domain, IGPS-like YE0199 2d980fa0286ebb89048fe6f9ecc733f7 276 PANTHER PTHR31862 14 276 1.5E-111 T 22-04-2016 YE1435 51eebc0071efcc2e04c30e3221044650 327 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 240 320 1.2E-7 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal YE1435 51eebc0071efcc2e04c30e3221044650 327 SUPERFAMILY SSF52540 6 177 5.53E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1435 51eebc0071efcc2e04c30e3221044650 327 PANTHER PTHR13748 1 323 3.0E-78 T 22-04-2016 YE1435 51eebc0071efcc2e04c30e3221044650 327 PANTHER PTHR13748:SF31 1 323 3.0E-78 T 22-04-2016 YE1435 51eebc0071efcc2e04c30e3221044650 327 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 5 172 1.9E-39 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain YE1435 51eebc0071efcc2e04c30e3221044650 327 Gene3D G3DSA:3.40.50.300 2 190 2.4E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1435 51eebc0071efcc2e04c30e3221044650 327 SMART SM00833 239 322 4.9E-6 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal YE3789 d87a0b42a3c89ee32fc418a99fe9db0d 446 Pfam PF01523 Putative modulator of DNA gyrase 32 323 3.1E-53 T 22-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- YE3789 d87a0b42a3c89ee32fc418a99fe9db0d 446 PANTHER PTHR30624:SF1 2 446 3.1E-198 T 22-04-2016 YE3789 d87a0b42a3c89ee32fc418a99fe9db0d 446 SUPERFAMILY SSF111283 13 446 9.42E-129 T 22-04-2016 YE3789 d87a0b42a3c89ee32fc418a99fe9db0d 446 PANTHER PTHR30624 2 446 3.1E-198 T 22-04-2016 YE1665 03bec47a02c8008fa864f3b30a0f82cf 116 PANTHER PTHR35862:SF2 1 108 3.5E-25 T 22-04-2016 YE1665 03bec47a02c8008fa864f3b30a0f82cf 116 Pfam PF04965 Gene 25-like lysozyme 17 95 2.5E-10 T 22-04-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD YE1665 03bec47a02c8008fa864f3b30a0f82cf 116 PANTHER PTHR35862 1 108 3.5E-25 T 22-04-2016 YE1665 03bec47a02c8008fa864f3b30a0f82cf 116 Gene3D G3DSA:3.10.450.40 8 111 4.4E-30 T 22-04-2016 YE1665 03bec47a02c8008fa864f3b30a0f82cf 116 SUPERFAMILY SSF160719 11 110 2.22E-24 T 22-04-2016 YE1539 7bf1d57135d9bf9f24148853513f8f8c 230 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 33.84 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 YE1539 7bf1d57135d9bf9f24148853513f8f8c 230 PANTHER PTHR21299 3 230 8.6E-86 T 22-04-2016 YE1539 7bf1d57135d9bf9f24148853513f8f8c 230 Pfam PF02224 Cytidylate kinase 8 221 3.2E-81 T 22-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 YE1539 7bf1d57135d9bf9f24148853513f8f8c 230 Gene3D G3DSA:3.40.50.300 6 221 1.1E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1539 7bf1d57135d9bf9f24148853513f8f8c 230 SUPERFAMILY SSF52540 6 224 3.43E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1539 7bf1d57135d9bf9f24148853513f8f8c 230 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 3.5E-92 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 YE2119 c122aaaaa3efd2288b8ae7c3cc7b6ea1 116 PANTHER PTHR33885 5 116 1.9E-33 T 22-04-2016 YE2119 c122aaaaa3efd2288b8ae7c3cc7b6ea1 116 Pfam PF04024 PspC domain 5 62 4.7E-17 T 22-04-2016 IPR007168 Phage shock protein, PspC, N-terminal YE2119 c122aaaaa3efd2288b8ae7c3cc7b6ea1 116 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 4 116 6.8E-40 T 22-04-2016 IPR014320 Phage shock protein, PspC YE2241 6d52fbf93a7d33f42ca64f5920dff88d 136 Pfam PF00816 H-NS histone family 32 128 3.5E-20 T 22-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 YE2241 6d52fbf93a7d33f42ca64f5920dff88d 136 Gene3D G3DSA:1.10.287.1050 1 58 1.0E-32 T 22-04-2016 IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 YE2241 6d52fbf93a7d33f42ca64f5920dff88d 136 PIRSF PIRSF002096 1 136 4.4E-57 T 22-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 YE2241 6d52fbf93a7d33f42ca64f5920dff88d 136 Gene3D G3DSA:4.10.430.10 93 136 4.0E-26 T 22-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 YE2241 6d52fbf93a7d33f42ca64f5920dff88d 136 SUPERFAMILY SSF81273 2 58 4.32E-18 T 22-04-2016 YE2241 6d52fbf93a7d33f42ca64f5920dff88d 136 PANTHER PTHR38097:SF1 2 136 2.8E-98 T 22-04-2016 YE2241 6d52fbf93a7d33f42ca64f5920dff88d 136 SUPERFAMILY SSF81273 94 136 1.06E-12 T 22-04-2016 YE2241 6d52fbf93a7d33f42ca64f5920dff88d 136 PANTHER PTHR38097 2 136 2.8E-98 T 22-04-2016 YE2241 6d52fbf93a7d33f42ca64f5920dff88d 136 SMART SM00528 88 136 1.1E-25 T 22-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 YE2422 7223b5a91c902d4cda2a5a339f43ecdf 313 Hamap MF_01666 Glyoxylate/hydroxypyruvate reductase A [ghrA]. 1 313 63.275 T 22-04-2016 IPR023514 Glyoxylate/hydroxypyruvate reductase A GO:0016618|GO:0030267|GO:0055114 KEGG: 00260+1.1.1.81|KEGG: 00620+1.1.1.79|KEGG: 00630+1.1.1.79+1.1.1.81|MetaCyc: PWY-1622 YE2422 7223b5a91c902d4cda2a5a339f43ecdf 313 PANTHER PTHR10996 1 308 9.5E-117 T 22-04-2016 YE2422 7223b5a91c902d4cda2a5a339f43ecdf 313 Gene3D G3DSA:3.40.50.720 99 279 2.5E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2422 7223b5a91c902d4cda2a5a339f43ecdf 313 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 106 278 1.9E-43 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 YE2422 7223b5a91c902d4cda2a5a339f43ecdf 313 SUPERFAMILY SSF51735 98 278 4.35E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2422 7223b5a91c902d4cda2a5a339f43ecdf 313 PANTHER PTHR10996:SF114 1 308 9.5E-117 T 22-04-2016 YE4112 6e8b1fc0ab27a48e9b2c39c45aef8144 369 PIRSF PIRSF038925 3 361 3.2E-112 T 22-04-2016 IPR026287 Adenosine monophosphate-protein transferase YE4112 6e8b1fc0ab27a48e9b2c39c45aef8144 369 PANTHER PTHR13504:SF35 1 367 1.5E-188 T 22-04-2016 YE4112 6e8b1fc0ab27a48e9b2c39c45aef8144 369 SUPERFAMILY SSF140931 95 282 8.11E-33 T 22-04-2016 IPR003812 Fido domain YE4112 6e8b1fc0ab27a48e9b2c39c45aef8144 369 Gene3D G3DSA:1.10.3290.10 32 284 3.9E-47 T 22-04-2016 IPR003812 Fido domain YE4112 6e8b1fc0ab27a48e9b2c39c45aef8144 369 Pfam PF02661 Fic/DOC family 140 214 5.8E-17 T 22-04-2016 IPR003812 Fido domain YE4112 6e8b1fc0ab27a48e9b2c39c45aef8144 369 Pfam PF13784 Fic/DOC family N-terminal 29 109 1.1E-21 T 22-04-2016 IPR025758 Fic/DOC N-terminal YE4112 6e8b1fc0ab27a48e9b2c39c45aef8144 369 PANTHER PTHR13504 1 367 1.5E-188 T 22-04-2016 YE0731 d4565b10231ef76a5abeb227f8fed8af 260 Gene3D G3DSA:3.40.50.1980 91 255 8.7E-52 T 22-04-2016 YE0731 d4565b10231ef76a5abeb227f8fed8af 260 PANTHER PTHR30532:SF1 1 258 3.7E-68 T 22-04-2016 YE0731 d4565b10231ef76a5abeb227f8fed8af 260 SUPERFAMILY SSF53807 1 253 6.67E-53 T 22-04-2016 YE0731 d4565b10231ef76a5abeb227f8fed8af 260 Pfam PF01497 Periplasmic binding protein 1 234 1.3E-39 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 YE0731 d4565b10231ef76a5abeb227f8fed8af 260 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 200 217 1.2E-44 T 22-04-2016 IPR008091 Ferrichrome-binding periplasmic protein YE0731 d4565b10231ef76a5abeb227f8fed8af 260 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 49 64 1.2E-44 T 22-04-2016 IPR008091 Ferrichrome-binding periplasmic protein YE0731 d4565b10231ef76a5abeb227f8fed8af 260 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 148 163 1.2E-44 T 22-04-2016 IPR008091 Ferrichrome-binding periplasmic protein YE0731 d4565b10231ef76a5abeb227f8fed8af 260 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 18 36 1.2E-44 T 22-04-2016 IPR008091 Ferrichrome-binding periplasmic protein YE0731 d4565b10231ef76a5abeb227f8fed8af 260 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 172 190 1.2E-44 T 22-04-2016 IPR008091 Ferrichrome-binding periplasmic protein YE0731 d4565b10231ef76a5abeb227f8fed8af 260 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 237 250 1.2E-44 T 22-04-2016 IPR008091 Ferrichrome-binding periplasmic protein YE0731 d4565b10231ef76a5abeb227f8fed8af 260 Gene3D G3DSA:3.40.50.1980 1 84 8.8E-30 T 22-04-2016 YE0731 d4565b10231ef76a5abeb227f8fed8af 260 PANTHER PTHR30532 1 258 3.7E-68 T 22-04-2016 YE1580 f57113adb4ba9f806c5a22bc2f7aa820 151 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 1 131 9.0E-68 T 22-04-2016 IPR009390 Macrodomain Ter protein, MatP GO:0043565 YE1580 f57113adb4ba9f806c5a22bc2f7aa820 151 Hamap MF_01073 Macrodomain Ter protein [matP]. 1 148 29.681 T 22-04-2016 IPR009390 Macrodomain Ter protein, MatP GO:0043565 YE1580 f57113adb4ba9f806c5a22bc2f7aa820 151 Pfam PF06303 Organiser of macrodomain of Terminus of chromosome 1 147 8.7E-75 T 22-04-2016 IPR009390 Macrodomain Ter protein, MatP GO:0043565 YE3398 0a5eb3c326c082716ff5c4c1cd089a4b 109 Hamap MF_02012 Cell division protein ZapA [zapA]. 1 109 33.686 T 22-04-2016 IPR023771 Cell division protein ZapA, eubacteria YE3398 0a5eb3c326c082716ff5c4c1cd089a4b 109 Pfam PF05164 Cell division protein ZapA 6 90 2.4E-19 T 22-04-2016 IPR007838 Cell division protein ZapA-like YE3398 0a5eb3c326c082716ff5c4c1cd089a4b 109 PANTHER PTHR34981 2 109 1.0E-31 T 22-04-2016 YE3398 0a5eb3c326c082716ff5c4c1cd089a4b 109 PANTHER PTHR34981:SF1 2 109 1.0E-31 T 22-04-2016 YE3398 0a5eb3c326c082716ff5c4c1cd089a4b 109 SUPERFAMILY SSF102829 6 94 4.97E-25 T 22-04-2016 IPR007838 Cell division protein ZapA-like YE2063 bc8055b76f6a8ef5384ba9e0c169d5be 791 Pfam PF15615 TerB-C domain 670 787 1.0E-9 T 22-04-2016 IPR028932 TerB-C domain YE2063 bc8055b76f6a8ef5384ba9e0c169d5be 791 SUPERFAMILY SSF158682 530 652 3.05E-15 T 22-04-2016 IPR029024 TerB-like YE2063 bc8055b76f6a8ef5384ba9e0c169d5be 791 Pfam PF13208 TerB N-terminal domain 124 326 5.0E-52 T 22-04-2016 IPR025266 TerB, N-terminal YE2063 bc8055b76f6a8ef5384ba9e0c169d5be 791 Gene3D G3DSA:1.10.3680.10 532 653 2.2E-30 T 22-04-2016 IPR029024 TerB-like YE3214 4a23479b29046e63b3ce2c34e7efbcbf 340 SUPERFAMILY SSF143631 26 336 1.31E-101 T 22-04-2016 IPR003374 ApbE-like domain YE3214 4a23479b29046e63b3ce2c34e7efbcbf 340 Pfam PF02424 ApbE family 33 309 1.1E-84 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 YE3214 4a23479b29046e63b3ce2c34e7efbcbf 340 PANTHER PTHR30040:SF3 9 340 4.6E-178 T 22-04-2016 YE3214 4a23479b29046e63b3ce2c34e7efbcbf 340 PANTHER PTHR30040 9 340 4.6E-178 T 22-04-2016 YE3214 4a23479b29046e63b3ce2c34e7efbcbf 340 PIRSF PIRSF006268 3 338 1.1E-90 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 YE1952 8ba1dc9c0f1e66302efccab2330bb34b 476 PANTHER PTHR11785:SF336 17 469 8.8E-217 T 22-04-2016 YE1952 8ba1dc9c0f1e66302efccab2330bb34b 476 PIRSF PIRSF006060 4 473 8.0E-69 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YE1952 8ba1dc9c0f1e66302efccab2330bb34b 476 ProSitePatterns PS00218 Amino acid permeases signature. 55 85 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 YE1952 8ba1dc9c0f1e66302efccab2330bb34b 476 Pfam PF00324 Amino acid permease 30 468 3.0E-114 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 YE1952 8ba1dc9c0f1e66302efccab2330bb34b 476 PANTHER PTHR11785 17 469 8.8E-217 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YE4141 39d693a85cce71ca2a12e0069f9a4fae 139 Gene3D G3DSA:3.40.50.1010 4 138 8.7E-28 T 22-04-2016 IPR029060 PIN domain-like YE4141 39d693a85cce71ca2a12e0069f9a4fae 139 PANTHER PTHR33653:SF2 2 137 1.7E-32 T 22-04-2016 YE4141 39d693a85cce71ca2a12e0069f9a4fae 139 Pfam PF01850 PIN domain 6 131 1.3E-11 T 22-04-2016 IPR002716 PIN domain YE4141 39d693a85cce71ca2a12e0069f9a4fae 139 SUPERFAMILY SSF88723 3 138 1.12E-29 T 22-04-2016 IPR029060 PIN domain-like YE4141 39d693a85cce71ca2a12e0069f9a4fae 139 PANTHER PTHR33653 2 137 1.7E-32 T 22-04-2016 YE3855 7a6385ef19f52a2a36812da8024a12c5 202 PANTHER PTHR33516:SF2 1 202 1.4E-107 T 22-04-2016 YE3855 7a6385ef19f52a2a36812da8024a12c5 202 Gene3D G3DSA:2.10.109.10 76 198 1.8E-46 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain YE3855 7a6385ef19f52a2a36812da8024a12c5 202 SUPERFAMILY SSF46785 3 69 6.67E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3855 7a6385ef19f52a2a36812da8024a12c5 202 Hamap MF_00015 LexA repressor [lexA]. 3 199 32.406 T 22-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 YE3855 7a6385ef19f52a2a36812da8024a12c5 202 PANTHER PTHR33516 1 202 1.4E-107 T 22-04-2016 YE3855 7a6385ef19f52a2a36812da8024a12c5 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 111 121 7.4E-14 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 YE3855 7a6385ef19f52a2a36812da8024a12c5 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 122 133 7.4E-14 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 YE3855 7a6385ef19f52a2a36812da8024a12c5 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 150 162 7.4E-14 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 YE3855 7a6385ef19f52a2a36812da8024a12c5 202 SUPERFAMILY SSF51306 76 198 2.96E-38 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C YE3855 7a6385ef19f52a2a36812da8024a12c5 202 Pfam PF01726 LexA DNA binding domain 1 65 2.5E-29 T 22-04-2016 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 YE3855 7a6385ef19f52a2a36812da8024a12c5 202 Pfam PF00717 Peptidase S24-like 114 179 7.3E-15 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B YE3855 7a6385ef19f52a2a36812da8024a12c5 202 Gene3D G3DSA:1.10.10.10 1 69 9.7E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3855 7a6385ef19f52a2a36812da8024a12c5 202 TIGRFAM TIGR00498 lexA: repressor LexA 1 199 8.4E-84 T 22-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 YE3427 cf79e77702463471f37e70be3e2cd00c 317 Hamap MF_00162 Glutathione synthetase [gshB]. 1 317 183.691 T 22-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 YE3427 cf79e77702463471f37e70be3e2cd00c 317 PANTHER PTHR21621:SF4 1 317 2.2E-170 T 22-04-2016 YE3427 cf79e77702463471f37e70be3e2cd00c 317 Gene3D G3DSA:3.40.50.20 2 129 1.2E-56 T 22-04-2016 IPR016185 Pre-ATP-grasp domain YE3427 cf79e77702463471f37e70be3e2cd00c 317 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 1.3E-80 T 22-04-2016 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 YE3427 cf79e77702463471f37e70be3e2cd00c 317 SUPERFAMILY SSF52440 2 122 3.16E-47 T 22-04-2016 IPR016185 Pre-ATP-grasp domain YE3427 cf79e77702463471f37e70be3e2cd00c 317 Gene3D G3DSA:3.30.470.20 192 296 9.9E-49 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 YE3427 cf79e77702463471f37e70be3e2cd00c 317 SUPERFAMILY SSF56059 123 311 2.36E-57 T 22-04-2016 YE3427 cf79e77702463471f37e70be3e2cd00c 317 TIGRFAM TIGR01380 glut_syn: glutathione synthase 2 312 2.4E-139 T 22-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 YE3427 cf79e77702463471f37e70be3e2cd00c 317 PANTHER PTHR21621 1 317 2.2E-170 T 22-04-2016 YE3427 cf79e77702463471f37e70be3e2cd00c 317 Gene3D G3DSA:3.30.1490.20 137 191 5.4E-31 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 YE3427 cf79e77702463471f37e70be3e2cd00c 317 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 120 1.5E-47 T 22-04-2016 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 YE2134 bd03f27d96bc809546c806908b1dd745 117 SUPERFAMILY SSF54593 9 116 1.13E-24 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase YE2134 bd03f27d96bc809546c806908b1dd745 117 PANTHER PTHR33993 6 117 1.5E-45 T 22-04-2016 YE2134 bd03f27d96bc809546c806908b1dd745 117 PANTHER PTHR33993:SF1 6 117 1.5E-45 T 22-04-2016 YE2134 bd03f27d96bc809546c806908b1dd745 117 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 111 9.2E-9 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain YE2134 bd03f27d96bc809546c806908b1dd745 117 Gene3D G3DSA:3.10.180.10 11 116 1.2E-22 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase YE2136 a9b8d504f54794c123d388e06a639953 87 Pfam PF11656 YjbD family (DUF3811) 1 87 1.5E-38 T 22-04-2016 IPR020317 Uncharacterised protein family YjbD YE2136 a9b8d504f54794c123d388e06a639953 87 ProDom PD063639 YJBD CYTOPLASMIC STY4411 YPO2363 ECS5006 Y1969 1 87 1.0E-42 T 22-04-2016 IPR020317 Uncharacterised protein family YjbD YE1065 ee95e3a886bd9c4ba6900de4be15a63b 274 Pfam PF07179 SseB protein N-terminal domain 3 133 6.5E-26 T 22-04-2016 IPR009839 SseB protein N-terminal domain YE1065 ee95e3a886bd9c4ba6900de4be15a63b 274 Pfam PF14581 SseB protein C-terminal domain 149 259 3.3E-35 T 22-04-2016 IPR027945 SseB protein, C-terminal YE2512 ab297c21c6c7fdc8f3b8db3ee2014ff9 390 SUPERFAMILY SSF103473 22 386 2.88E-40 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE2512 ab297c21c6c7fdc8f3b8db3ee2014ff9 390 Gene3D G3DSA:1.20.1250.20 207 385 4.4E-15 T 22-04-2016 YE2512 ab297c21c6c7fdc8f3b8db3ee2014ff9 390 Gene3D G3DSA:1.20.1250.20 22 191 1.6E-15 T 22-04-2016 YE2512 ab297c21c6c7fdc8f3b8db3ee2014ff9 390 PANTHER PTHR23514:SF13 16 381 2.4E-95 T 22-04-2016 YE2512 ab297c21c6c7fdc8f3b8db3ee2014ff9 390 Pfam PF07690 Major Facilitator Superfamily 22 201 5.9E-12 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YE2512 ab297c21c6c7fdc8f3b8db3ee2014ff9 390 Pfam PF07690 Major Facilitator Superfamily 218 382 5.3E-10 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YE2512 ab297c21c6c7fdc8f3b8db3ee2014ff9 390 PANTHER PTHR23514 16 381 2.4E-95 T 22-04-2016 YE3083 44a371b5a8e3276a2be88b46d7b637e9 334 Pfam PF00535 Glycosyl transferase family 2 7 163 1.1E-19 T 22-04-2016 IPR001173 Glycosyltransferase 2-like YE3083 44a371b5a8e3276a2be88b46d7b637e9 334 Gene3D G3DSA:3.90.550.10 5 234 6.2E-26 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YE3083 44a371b5a8e3276a2be88b46d7b637e9 334 PANTHER PTHR22916 2 231 6.9E-25 T 22-04-2016 YE3083 44a371b5a8e3276a2be88b46d7b637e9 334 SUPERFAMILY SSF53448 3 249 2.63E-29 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YE0242 e0661550b9c92ffe5a13910b74b14582 295 SUPERFAMILY SSF161098 56 283 1.15E-49 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE0242 e0661550b9c92ffe5a13910b74b14582 295 PANTHER PTHR32243:SF13 5 293 1.1E-114 T 22-04-2016 YE0242 e0661550b9c92ffe5a13910b74b14582 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 293 1.2E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE0242 e0661550b9c92ffe5a13910b74b14582 295 PANTHER PTHR32243 5 293 1.1E-114 T 22-04-2016 YE0242 e0661550b9c92ffe5a13910b74b14582 295 Gene3D G3DSA:1.10.3720.10 62 291 1.2E-51 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE0547 dc6692f4a1f6a2220053005490f1b635 391 PANTHER PTHR23514 1 383 2.1E-64 T 22-04-2016 YE0547 dc6692f4a1f6a2220053005490f1b635 391 Pfam PF07690 Major Facilitator Superfamily 15 323 4.3E-13 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YE0547 dc6692f4a1f6a2220053005490f1b635 391 Gene3D G3DSA:1.20.1250.20 199 382 1.1E-15 T 22-04-2016 YE0547 dc6692f4a1f6a2220053005490f1b635 391 SUPERFAMILY SSF103473 8 382 1.96E-32 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE0547 dc6692f4a1f6a2220053005490f1b635 391 PANTHER PTHR23514:SF13 1 383 2.1E-64 T 22-04-2016 YE0547 dc6692f4a1f6a2220053005490f1b635 391 Gene3D G3DSA:1.20.1250.20 7 184 2.3E-9 T 22-04-2016 YE2572 cd5643d81e189471e63a8a6ab60c84b6 275 SUPERFAMILY SSF53335 80 269 4.1E-59 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE2572 cd5643d81e189471e63a8a6ab60c84b6 275 PANTHER PTHR24422:SF13 3 275 3.5E-158 T 22-04-2016 YE2572 cd5643d81e189471e63a8a6ab60c84b6 275 Gene3D G3DSA:1.10.155.10 3 78 3.5E-33 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal YE2572 cd5643d81e189471e63a8a6ab60c84b6 275 SMART SM00138 12 272 1.5E-114 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 YE2572 cd5643d81e189471e63a8a6ab60c84b6 275 Pfam PF01739 CheR methyltransferase, SAM binding domain 80 267 2.3E-58 T 22-04-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal YE2572 cd5643d81e189471e63a8a6ab60c84b6 275 Gene3D G3DSA:3.40.50.150 79 269 1.8E-68 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE2572 cd5643d81e189471e63a8a6ab60c84b6 275 PRINTS PR00996 Glutamate methyltransferase family signature 34 47 4.0E-45 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 YE2572 cd5643d81e189471e63a8a6ab60c84b6 275 PRINTS PR00996 Glutamate methyltransferase family signature 231 254 4.0E-45 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 YE2572 cd5643d81e189471e63a8a6ab60c84b6 275 PRINTS PR00996 Glutamate methyltransferase family signature 140 156 4.0E-45 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 YE2572 cd5643d81e189471e63a8a6ab60c84b6 275 PRINTS PR00996 Glutamate methyltransferase family signature 73 85 4.0E-45 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 YE2572 cd5643d81e189471e63a8a6ab60c84b6 275 PRINTS PR00996 Glutamate methyltransferase family signature 106 126 4.0E-45 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 YE2572 cd5643d81e189471e63a8a6ab60c84b6 275 PRINTS PR00996 Glutamate methyltransferase family signature 212 226 4.0E-45 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 YE2572 cd5643d81e189471e63a8a6ab60c84b6 275 SUPERFAMILY SSF47757 4 79 6.28E-25 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal YE2572 cd5643d81e189471e63a8a6ab60c84b6 275 PIRSF PIRSF000410 2 273 3.6E-99 T 22-04-2016 IPR026024 Chemotaxis protein methyltransferase CheR YE2572 cd5643d81e189471e63a8a6ab60c84b6 275 Pfam PF03705 CheR methyltransferase, all-alpha domain 15 65 7.3E-20 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal YE2572 cd5643d81e189471e63a8a6ab60c84b6 275 PANTHER PTHR24422 3 275 3.5E-158 T 22-04-2016 YE1329 2950328d5f9626cfd972e7437c53228d 95 PANTHER PTHR33843 1 93 2.7E-22 T 22-04-2016 YE1329 2950328d5f9626cfd972e7437c53228d 95 SUPERFAMILY SSF52794 1 86 6.02E-20 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 YE1329 2950328d5f9626cfd972e7437c53228d 95 Gene3D G3DSA:3.40.50.270 2 88 2.3E-12 T 22-04-2016 YE1329 2950328d5f9626cfd972e7437c53228d 95 PANTHER PTHR33843:SF2 1 93 2.7E-22 T 22-04-2016 YE1329 2950328d5f9626cfd972e7437c53228d 95 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 85 4.0E-12 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 YE0734 91cac26f17c388ef3f50770a3273ecdd 426 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 425 1.9E-201 T 22-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 YE0734 91cac26f17c388ef3f50770a3273ecdd 426 Pfam PF00202 Aminotransferase class-III 33 398 1.1E-76 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YE0734 91cac26f17c388ef3f50770a3273ecdd 426 Gene3D G3DSA:3.90.1150.10 319 425 1.2E-45 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YE0734 91cac26f17c388ef3f50770a3273ecdd 426 Gene3D G3DSA:3.90.1150.10 2 69 1.2E-45 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YE0734 91cac26f17c388ef3f50770a3273ecdd 426 Gene3D G3DSA:3.40.640.10 70 314 9.9E-83 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YE0734 91cac26f17c388ef3f50770a3273ecdd 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YE0734 91cac26f17c388ef3f50770a3273ecdd 426 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 107.262 T 22-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 YE0734 91cac26f17c388ef3f50770a3273ecdd 426 SUPERFAMILY SSF53383 2 425 5.55E-137 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YE0734 91cac26f17c388ef3f50770a3273ecdd 426 PANTHER PTHR11986 1 426 4.9E-238 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YE0734 91cac26f17c388ef3f50770a3273ecdd 426 PANTHER PTHR11986:SF5 1 426 4.9E-238 T 22-04-2016 YE1230 337edf119fcb7a18b8b645e892874ea6 190 SUPERFAMILY SSF55729 14 182 9.91E-45 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE1230 337edf119fcb7a18b8b645e892874ea6 190 Gene3D G3DSA:3.40.630.30 10 186 1.1E-44 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE1230 337edf119fcb7a18b8b645e892874ea6 190 PANTHER PTHR13256:SF10 8 187 4.9E-41 T 22-04-2016 YE1230 337edf119fcb7a18b8b645e892874ea6 190 PANTHER PTHR13256 8 187 4.9E-41 T 22-04-2016 YE1230 337edf119fcb7a18b8b645e892874ea6 190 Pfam PF13302 Acetyltransferase (GNAT) domain 18 158 1.3E-26 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YE1997 f0eb553e99b780bd35f33d07210045d7 601 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 28 601 40.18 T 22-04-2016 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 YE1997 f0eb553e99b780bd35f33d07210045d7 601 Gene3D G3DSA:3.10.410.10 489 577 2.4E-29 T 22-04-2016 YE1997 f0eb553e99b780bd35f33d07210045d7 601 SUPERFAMILY SSF52540 35 599 3.01E-208 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1997 f0eb553e99b780bd35f33d07210045d7 601 Gene3D G3DSA:3.30.1510.10 154 285 1.8E-46 T 22-04-2016 YE1997 f0eb553e99b780bd35f33d07210045d7 601 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 366 377 - T 22-04-2016 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 YE1997 f0eb553e99b780bd35f33d07210045d7 601 Gene3D G3DSA:3.40.50.300 41 153 7.1E-127 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1997 f0eb553e99b780bd35f33d07210045d7 601 Gene3D G3DSA:3.40.50.300 286 486 7.1E-127 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1997 f0eb553e99b780bd35f33d07210045d7 601 PANTHER PTHR10025 35 600 7.2E-297 T 22-04-2016 YE1997 f0eb553e99b780bd35f33d07210045d7 601 Pfam PF01268 Formate--tetrahydrofolate ligase 33 600 1.0E-229 T 22-04-2016 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 YE0557 d641b9e92684fa1d538cf646b03b2c15 366 SMART SM00267 185 355 1.0E-52 T 22-04-2016 IPR000160 GGDEF domain YE0557 d641b9e92684fa1d538cf646b03b2c15 366 PANTHER PTHR10799:SF750 36 186 1.2E-23 T 22-04-2016 YE0557 d641b9e92684fa1d538cf646b03b2c15 366 PANTHER PTHR10799:SF750 226 354 1.2E-23 T 22-04-2016 YE0557 d641b9e92684fa1d538cf646b03b2c15 366 Pfam PF00990 Diguanylate cyclase, GGDEF domain 197 351 2.2E-46 T 22-04-2016 IPR000160 GGDEF domain YE0557 d641b9e92684fa1d538cf646b03b2c15 366 Gene3D G3DSA:3.30.70.270 198 360 1.3E-48 T 22-04-2016 YE0557 d641b9e92684fa1d538cf646b03b2c15 366 SUPERFAMILY SSF55073 201 356 1.57E-43 T 22-04-2016 IPR029787 Nucleotide cyclase YE0557 d641b9e92684fa1d538cf646b03b2c15 366 PANTHER PTHR10799 36 186 1.2E-23 T 22-04-2016 YE0557 d641b9e92684fa1d538cf646b03b2c15 366 PANTHER PTHR10799 226 354 1.2E-23 T 22-04-2016 YE0557 d641b9e92684fa1d538cf646b03b2c15 366 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 195 354 3.3E-45 T 22-04-2016 IPR000160 GGDEF domain YE3661 dc29171e8e913a6e427fc8ff29dfe5b3 194 Pfam PF05728 Uncharacterised protein family (UPF0227) 5 189 3.6E-70 T 22-04-2016 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA YE3661 dc29171e8e913a6e427fc8ff29dfe5b3 194 PANTHER PTHR35602:SF3 1 194 1.6E-128 T 22-04-2016 YE3661 dc29171e8e913a6e427fc8ff29dfe5b3 194 Gene3D G3DSA:3.40.50.1820 4 180 1.3E-14 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE3661 dc29171e8e913a6e427fc8ff29dfe5b3 194 PANTHER PTHR35602 1 194 1.6E-128 T 22-04-2016 YE3661 dc29171e8e913a6e427fc8ff29dfe5b3 194 SUPERFAMILY SSF53474 4 189 4.57E-17 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE2679 65bc3236bacef66fa1016ccec8f802a1 465 Pfam PF01554 MatE 30 190 6.0E-35 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 YE2679 65bc3236bacef66fa1016ccec8f802a1 465 Pfam PF01554 MatE 260 421 2.2E-20 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 YE2679 65bc3236bacef66fa1016ccec8f802a1 465 PANTHER PTHR11206 11 462 2.8E-108 T 22-04-2016 YE2679 65bc3236bacef66fa1016ccec8f802a1 465 TIGRFAM TIGR00797 matE: MATE efflux family protein 33 434 6.6E-64 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 YE2679 65bc3236bacef66fa1016ccec8f802a1 465 PANTHER PTHR11206:SF95 11 462 2.8E-108 T 22-04-2016 YE2679 65bc3236bacef66fa1016ccec8f802a1 465 PIRSF PIRSF006603 11 461 1.9E-66 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 YE4180 3f57daab15e0b0656562314f40a98331 271 Gene3D G3DSA:3.40.190.10 28 159 9.4E-39 T 22-04-2016 YE4180 3f57daab15e0b0656562314f40a98331 271 PANTHER PTHR30429 1 270 2.4E-65 T 22-04-2016 IPR004872 Lipoprotein NlpA family YE4180 3f57daab15e0b0656562314f40a98331 271 Pfam PF03180 NLPA lipoprotein 31 267 9.1E-57 T 22-04-2016 IPR004872 Lipoprotein NlpA family YE4180 3f57daab15e0b0656562314f40a98331 271 SUPERFAMILY SSF53850 31 260 1.45E-51 T 22-04-2016 YE1650 b19619d180e0d4d3766817ad0dbfb422 136 PIRSF PIRSF029208 1 135 4.3E-56 T 22-04-2016 IPR016912 Bacteriophage P2, GpU YE1650 b19619d180e0d4d3766817ad0dbfb422 136 Pfam PF06995 Phage P2 GpU 6 125 6.9E-44 T 22-04-2016 IPR009734 Myoviridae, GpU YE0442 84ebfc897c12457add11f81857a18709 340 PANTHER PTHR30137 1 330 7.5E-165 T 22-04-2016 YE0442 84ebfc897c12457add11f81857a18709 340 PANTHER PTHR30137:SF2 1 330 7.5E-165 T 22-04-2016 YE0442 84ebfc897c12457add11f81857a18709 340 SUPERFAMILY SSF51679 8 329 5.23E-86 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 YE0442 84ebfc897c12457add11f81857a18709 340 Gene3D G3DSA:3.20.20.30 8 329 2.1E-91 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 YE0442 84ebfc897c12457add11f81857a18709 340 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 9 329 4.8E-140 T 22-04-2016 IPR019949 Luciferase family oxidoreductase, group 1 YE0442 84ebfc897c12457add11f81857a18709 340 Pfam PF00296 Luciferase-like monooxygenase 21 244 9.2E-32 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 YE3266 562fd10de9f04c252d1ded104e74cb6d 132 SUPERFAMILY SSF54593 4 129 5.64E-31 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase YE3266 562fd10de9f04c252d1ded104e74cb6d 132 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 126 5.4E-20 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain YE3266 562fd10de9f04c252d1ded104e74cb6d 132 Gene3D G3DSA:3.10.180.10 3 128 3.5E-34 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase YE3552 21efd11efa7aa37f17714e320bcae2a4 100 SUPERFAMILY SSF140129 57 85 8.63E-5 T 22-04-2016 YE0290A b88d288ec0996892e453aa577dea0583 71 PANTHER PTHR34472 3 71 2.1E-19 T 22-04-2016 YE0290A b88d288ec0996892e453aa577dea0583 71 SUPERFAMILY SSF54285 6 71 1.44E-16 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp YE0290A b88d288ec0996892e453aa577dea0583 71 Pfam PF02597 ThiS family 12 71 1.0E-12 T 22-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 YE0290A b88d288ec0996892e453aa577dea0583 71 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 8 71 3.5E-19 T 22-04-2016 IPR010035 ThiS, thiamine-biosynthesis YE0290A b88d288ec0996892e453aa577dea0583 71 Gene3D G3DSA:3.10.20.30 6 71 8.1E-22 T 22-04-2016 IPR012675 Beta-grasp domain YE0290A b88d288ec0996892e453aa577dea0583 71 PANTHER PTHR34472:SF1 3 71 2.1E-19 T 22-04-2016 YE1260 884c24a8804b58b55da3aad5b95b602d 110 PANTHER PTHR30305 1 110 2.2E-81 T 22-04-2016 YE1260 884c24a8804b58b55da3aad5b95b602d 110 Pfam PF08274 PhnA Zinc-Ribbon 1 29 4.3E-11 T 22-04-2016 IPR013987 PhnA protein, N-terminal YE1260 884c24a8804b58b55da3aad5b95b602d 110 SUPERFAMILY SSF82057 38 109 5.95E-29 T 22-04-2016 YE1260 884c24a8804b58b55da3aad5b95b602d 110 Pfam PF03831 PhnA domain 43 109 2.7E-34 T 22-04-2016 IPR013988 PhnA protein, C-terminal YE1260 884c24a8804b58b55da3aad5b95b602d 110 SUPERFAMILY SSF57783 1 32 3.06E-11 T 22-04-2016 YE1260 884c24a8804b58b55da3aad5b95b602d 110 Gene3D G3DSA:2.30.30.40 41 109 2.3E-38 T 22-04-2016 YE1260 884c24a8804b58b55da3aad5b95b602d 110 Gene3D G3DSA:2.20.25.10 1 38 2.0E-16 T 22-04-2016 YE1260 884c24a8804b58b55da3aad5b95b602d 110 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 1 109 4.8E-51 T 22-04-2016 IPR004624 PhnA protein YE0022 667e49d25deb660ef51621c02309eb2c 217 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 12 195 6.2E-73 T 22-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 YE0022 667e49d25deb660ef51621c02309eb2c 217 PANTHER PTHR11649 8 214 3.5E-59 T 22-04-2016 YE0022 667e49d25deb660ef51621c02309eb2c 217 Pfam PF01926 50S ribosome-binding GTPase 30 148 1.3E-19 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YE0022 667e49d25deb660ef51621c02309eb2c 217 SUPERFAMILY SSF52540 19 209 4.98E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0022 667e49d25deb660ef51621c02309eb2c 217 Gene3D G3DSA:3.40.50.300 12 200 7.7E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0022 667e49d25deb660ef51621c02309eb2c 217 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 16 199 27.354 T 22-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 YE0693 680959a686c530eb2cdf896ef3a73cfa 284 SUPERFAMILY SSF90123 9 200 9.03E-7 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YE0693 680959a686c530eb2cdf896ef3a73cfa 284 PANTHER PTHR38684 2 284 1.5E-101 T 22-04-2016 YE0693 680959a686c530eb2cdf896ef3a73cfa 284 Pfam PF17113 Regulatory signalling modulator protein AmpE 1 284 2.1E-158 T 22-04-2016 IPR031347 Protein AmpE YE4170 e9290ef77d972c2cc4842453dae89d46 804 Gene3D G3DSA:3.30.230.10 220 392 8.4E-78 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YE4170 e9290ef77d972c2cc4842453dae89d46 804 PANTHER PTHR10169 1 553 0.0 T 22-04-2016 YE4170 e9290ef77d972c2cc4842453dae89d46 804 PANTHER PTHR10169 722 804 0.0 T 22-04-2016 YE4170 e9290ef77d972c2cc4842453dae89d46 804 Gene3D G3DSA:3.30.565.10 15 218 4.9E-93 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE4170 e9290ef77d972c2cc4842453dae89d46 804 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 733 793 3.1E-29 T 22-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 YE4170 e9290ef77d972c2cc4842453dae89d46 804 SMART SM00387 31 175 3.3E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE4170 e9290ef77d972c2cc4842453dae89d46 804 ProSitePatterns PS00177 DNA topoisomerase II signature. 422 430 - T 22-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 YE4170 e9290ef77d972c2cc4842453dae89d46 804 PRINTS PR00418 DNA topoisomerase II family signature 525 537 1.4E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YE4170 e9290ef77d972c2cc4842453dae89d46 804 PRINTS PR00418 DNA topoisomerase II family signature 487 503 1.4E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YE4170 e9290ef77d972c2cc4842453dae89d46 804 PRINTS PR00418 DNA topoisomerase II family signature 70 83 1.4E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YE4170 e9290ef77d972c2cc4842453dae89d46 804 PRINTS PR00418 DNA topoisomerase II family signature 505 522 1.4E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YE4170 e9290ef77d972c2cc4842453dae89d46 804 PRINTS PR00418 DNA topoisomerase II family signature 420 434 1.4E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YE4170 e9290ef77d972c2cc4842453dae89d46 804 PRINTS PR00418 DNA topoisomerase II family signature 35 50 1.4E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YE4170 e9290ef77d972c2cc4842453dae89d46 804 PRINTS PR00418 DNA topoisomerase II family signature 268 281 1.4E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YE4170 e9290ef77d972c2cc4842453dae89d46 804 PRINTS PR00418 DNA topoisomerase II family signature 113 127 1.4E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YE4170 e9290ef77d972c2cc4842453dae89d46 804 PRINTS PR00418 DNA topoisomerase II family signature 736 752 1.4E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YE4170 e9290ef77d972c2cc4842453dae89d46 804 SUPERFAMILY SSF55874 4 220 1.24E-77 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE4170 e9290ef77d972c2cc4842453dae89d46 804 Pfam PF01751 Toprim domain 419 531 5.1E-18 T 22-04-2016 IPR006171 Toprim domain YE4170 e9290ef77d972c2cc4842453dae89d46 804 SUPERFAMILY SSF56719 730 795 2.59E-86 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 YE4170 e9290ef77d972c2cc4842453dae89d46 804 SUPERFAMILY SSF56719 394 560 2.59E-86 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 YE4170 e9290ef77d972c2cc4842453dae89d46 804 SMART SM00433 35 797 6.4E-280 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 YE4170 e9290ef77d972c2cc4842453dae89d46 804 PRINTS PR01159 DNA gyrase subunit B signature 374 394 4.6E-79 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 YE4170 e9290ef77d972c2cc4842453dae89d46 804 PRINTS PR01159 DNA gyrase subunit B signature 196 209 4.6E-79 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 YE4170 e9290ef77d972c2cc4842453dae89d46 804 PRINTS PR01159 DNA gyrase subunit B signature 181 196 4.6E-79 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 YE4170 e9290ef77d972c2cc4842453dae89d46 804 PRINTS PR01159 DNA gyrase subunit B signature 312 328 4.6E-79 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 YE4170 e9290ef77d972c2cc4842453dae89d46 804 PRINTS PR01159 DNA gyrase subunit B signature 5 15 4.6E-79 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 YE4170 e9290ef77d972c2cc4842453dae89d46 804 PRINTS PR01159 DNA gyrase subunit B signature 220 242 4.6E-79 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 YE4170 e9290ef77d972c2cc4842453dae89d46 804 PRINTS PR01159 DNA gyrase subunit B signature 757 769 4.6E-79 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 YE4170 e9290ef77d972c2cc4842453dae89d46 804 PRINTS PR01159 DNA gyrase subunit B signature 470 479 4.6E-79 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 YE4170 e9290ef77d972c2cc4842453dae89d46 804 PRINTS PR01159 DNA gyrase subunit B signature 360 374 4.6E-79 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 YE4170 e9290ef77d972c2cc4842453dae89d46 804 PRINTS PR01159 DNA gyrase subunit B signature 773 789 4.6E-79 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 YE4170 e9290ef77d972c2cc4842453dae89d46 804 SUPERFAMILY SSF54211 221 392 3.79E-62 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YE4170 e9290ef77d972c2cc4842453dae89d46 804 Pfam PF00204 DNA gyrase B 221 390 3.0E-59 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 YE4170 e9290ef77d972c2cc4842453dae89d46 804 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 804 109.987 T 22-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YE4170 e9290ef77d972c2cc4842453dae89d46 804 Gene3D G3DSA:3.40.50.670 718 786 1.3E-99 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 YE4170 e9290ef77d972c2cc4842453dae89d46 804 Gene3D G3DSA:3.40.50.670 404 550 1.3E-99 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 YE4170 e9290ef77d972c2cc4842453dae89d46 804 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 173 2.8E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE4170 e9290ef77d972c2cc4842453dae89d46 804 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 804 0.0 T 22-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 YE2872 b28b5bab579165a7ecf7ee2f1419a69f 533 SUPERFAMILY SSF48371 122 229 2.7E-9 T 22-04-2016 IPR016024 Armadillo-type fold GO:0005488 YE2872 b28b5bab579165a7ecf7ee2f1419a69f 533 PANTHER PTHR11795 105 533 2.9E-179 T 22-04-2016 YE2872 b28b5bab579165a7ecf7ee2f1419a69f 533 Pfam PF02653 Branched-chain amino acid transport system / permease component 241 516 9.5E-50 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YE2872 b28b5bab579165a7ecf7ee2f1419a69f 533 PANTHER PTHR11795:SF349 105 533 2.9E-179 T 22-04-2016 YE2872 b28b5bab579165a7ecf7ee2f1419a69f 533 Gene3D G3DSA:1.25.10.10 122 229 2.0E-7 T 22-04-2016 IPR011989 Armadillo-like helical YE2872 b28b5bab579165a7ecf7ee2f1419a69f 533 Pfam PF13646 HEAT repeats 174 229 1.3E-6 T 22-04-2016 YE2872 b28b5bab579165a7ecf7ee2f1419a69f 533 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 239 530 1.8E-129 T 22-04-2016 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type YE3197 7dfa69656a2825e34950a4de876b1c27 249 Pfam PF07317 Flagellar regulator YcgR 9 112 1.3E-28 T 22-04-2016 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal YE3197 7dfa69656a2825e34950a4de876b1c27 249 Hamap MF_01457 Flagellar brake protein YcgR [ycgR]. 4 242 27.989 T 22-04-2016 IPR023787 Type III secretion system flagellar brake protein YcgR GO:0035438|GO:0071945 YE3197 7dfa69656a2825e34950a4de876b1c27 249 Gene3D G3DSA:2.40.10.220 116 243 6.4E-16 T 22-04-2016 YE3197 7dfa69656a2825e34950a4de876b1c27 249 Pfam PF07238 PilZ domain 115 233 1.1E-9 T 22-04-2016 IPR009875 PilZ domain GO:0035438 YE3197 7dfa69656a2825e34950a4de876b1c27 249 Gene3D G3DSA:2.30.110.10 10 115 9.8E-13 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 YE1269 27ce373da8071d2e9aebe330c0096fac 188 PANTHER PTHR10681 2 185 1.7E-87 T 22-04-2016 YE1269 27ce373da8071d2e9aebe330c0096fac 188 ProSitePatterns PS00194 Thioredoxin family active site. 77 95 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 YE1269 27ce373da8071d2e9aebe330c0096fac 188 Gene3D G3DSA:3.40.30.10 15 183 8.5E-43 T 22-04-2016 IPR012336 Thioredoxin-like fold YE1269 27ce373da8071d2e9aebe330c0096fac 188 SUPERFAMILY SSF52833 51 184 4.13E-39 T 22-04-2016 IPR012336 Thioredoxin-like fold YE1269 27ce373da8071d2e9aebe330c0096fac 188 PANTHER PTHR10681:SF107 2 185 1.7E-87 T 22-04-2016 YE1269 27ce373da8071d2e9aebe330c0096fac 188 Pfam PF08534 Redoxin 47 169 2.6E-23 T 22-04-2016 IPR013740 Redoxin GO:0016491 YE1269 27ce373da8071d2e9aebe330c0096fac 188 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 11 183 2.8E-75 T 22-04-2016 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 YE0072 c4245c872f3870fbd0bfb1d44438aee6 310 PANTHER PTHR10366 1 308 7.3E-129 T 22-04-2016 YE0072 c4245c872f3870fbd0bfb1d44438aee6 310 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 309 58.199 T 22-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 YE0072 c4245c872f3870fbd0bfb1d44438aee6 310 Gene3D G3DSA:3.90.25.10 172 291 1.7E-36 T 22-04-2016 YE0072 c4245c872f3870fbd0bfb1d44438aee6 310 PANTHER PTHR10366:SF469 1 308 7.3E-129 T 22-04-2016 YE0072 c4245c872f3870fbd0bfb1d44438aee6 310 Gene3D G3DSA:3.40.50.720 2 171 5.0E-25 T 22-04-2016 IPR016040 NAD(P)-binding domain YE0072 c4245c872f3870fbd0bfb1d44438aee6 310 SUPERFAMILY SSF51735 1 306 1.3E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain YE0072 c4245c872f3870fbd0bfb1d44438aee6 310 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 308 3.2E-136 T 22-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 YE0072 c4245c872f3870fbd0bfb1d44438aee6 310 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 236 2.5E-47 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 YE3718 52c32d48e46f7ddc07f0d4f05407ae3e 122 PANTHER PTHR33452 1 122 5.7E-84 T 22-04-2016 YE3718 52c32d48e46f7ddc07f0d4f05407ae3e 122 PANTHER PTHR33452:SF8 1 122 5.7E-84 T 22-04-2016 YE3718 52c32d48e46f7ddc07f0d4f05407ae3e 122 Pfam PF07681 DoxX 1 79 1.4E-15 T 22-04-2016 IPR032808 DoxX family YE0166 b0e1077f0c66e4c061b55248e9d5ebf6 358 SMART SM00490 200 281 4.5E-30 T 22-04-2016 IPR001650 Helicase, C-terminal YE0166 b0e1077f0c66e4c061b55248e9d5ebf6 358 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 93 101 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site YE0166 b0e1077f0c66e4c061b55248e9d5ebf6 358 Gene3D G3DSA:3.40.50.300 9 160 2.7E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0166 b0e1077f0c66e4c061b55248e9d5ebf6 358 SMART SM00487 1 164 1.2E-16 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain YE0166 b0e1077f0c66e4c061b55248e9d5ebf6 358 Pfam PF00270 DEAD/DEAH box helicase 10 136 4.3E-30 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YE0166 b0e1077f0c66e4c061b55248e9d5ebf6 358 PANTHER PTHR24031:SF173 1 355 7.1E-227 T 22-04-2016 YE0166 b0e1077f0c66e4c061b55248e9d5ebf6 358 Gene3D G3DSA:3.40.50.300 161 312 5.4E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0166 b0e1077f0c66e4c061b55248e9d5ebf6 358 Pfam PF00271 Helicase conserved C-terminal domain 173 281 2.9E-28 T 22-04-2016 IPR001650 Helicase, C-terminal YE0166 b0e1077f0c66e4c061b55248e9d5ebf6 358 SUPERFAMILY SSF52540 14 293 8.59E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0166 b0e1077f0c66e4c061b55248e9d5ebf6 358 PANTHER PTHR24031 1 355 7.1E-227 T 22-04-2016 YE0569 e63f78b2e36c2bdd921f1c4796761ccd 423 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 2 420 3.9E-152 T 22-04-2016 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 YE0569 e63f78b2e36c2bdd921f1c4796761ccd 423 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 199 420 1.2E-75 T 22-04-2016 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 YE0569 e63f78b2e36c2bdd921f1c4796761ccd 423 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 6 79 4.8E-21 T 22-04-2016 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 YE0569 e63f78b2e36c2bdd921f1c4796761ccd 423 Pfam PF07670 Nucleoside recognition 97 193 1.0E-8 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 YE0569 e63f78b2e36c2bdd921f1c4796761ccd 423 PANTHER PTHR10590 2 420 2.1E-213 T 22-04-2016 IPR008276 Concentrative nucleoside transporter GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 YE3021 a1fafe659ce333d988ca5c3d7feec2f6 531 PANTHER PTHR10362 19 519 1.0E-159 T 22-04-2016 YE3021 a1fafe659ce333d988ca5c3d7feec2f6 531 Gene3D G3DSA:1.20.200.10 205 520 5.6E-86 T 22-04-2016 YE3021 a1fafe659ce333d988ca5c3d7feec2f6 531 SUPERFAMILY SSF48557 11 522 3.85E-156 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 YE3021 a1fafe659ce333d988ca5c3d7feec2f6 531 Pfam PF00221 Aromatic amino acid lyase 19 495 1.8E-144 T 22-04-2016 IPR001106 Aromatic amino acid lyase YE3021 a1fafe659ce333d988ca5c3d7feec2f6 531 Gene3D G3DSA:1.10.275.10 15 204 7.3E-60 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal YE2394 390331b0b6017dde68291324153f1cc9 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 46.709 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 YE2394 390331b0b6017dde68291324153f1cc9 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 158 6.5E-80 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 YE2394 390331b0b6017dde68291324153f1cc9 173 PANTHER PTHR30194 1 169 7.1E-75 T 22-04-2016 YE2394 390331b0b6017dde68291324153f1cc9 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 22-04-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 YE2394 390331b0b6017dde68291324153f1cc9 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 5.9E-65 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 YE2394 390331b0b6017dde68291324153f1cc9 173 Gene3D G3DSA:3.30.420.10 3 156 1.1E-66 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE2394 390331b0b6017dde68291324153f1cc9 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 6.6E-42 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 YE2394 390331b0b6017dde68291324153f1cc9 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 6.6E-42 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 YE2394 390331b0b6017dde68291324153f1cc9 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 6.6E-42 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 YE2394 390331b0b6017dde68291324153f1cc9 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 6.6E-42 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 YE2394 390331b0b6017dde68291324153f1cc9 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 6.6E-42 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 YE2394 390331b0b6017dde68291324153f1cc9 173 SUPERFAMILY SSF53098 3 156 4.93E-55 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE3111 911f19d1ac4a426be6670a209f86a0a0 242 SUPERFAMILY SSF52540 2 206 6.35E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3111 911f19d1ac4a426be6670a209f86a0a0 242 Pfam PF00005 ABC transporter 23 158 1.8E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE3111 911f19d1ac4a426be6670a209f86a0a0 242 PANTHER PTHR24220 3 203 7.9E-57 T 22-04-2016 YE3111 911f19d1ac4a426be6670a209f86a0a0 242 SMART SM00382 26 208 5.4E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain YE3111 911f19d1ac4a426be6670a209f86a0a0 242 Gene3D G3DSA:3.40.50.300 1 204 3.4E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3111 911f19d1ac4a426be6670a209f86a0a0 242 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE3111 911f19d1ac4a426be6670a209f86a0a0 242 PANTHER PTHR24220:SF581 3 203 7.9E-57 T 22-04-2016 YE3510 b5586129b6909550300566a1f1fee2d8 252 TIGRFAM TIGR03761 ICE_PFL4669: integrating conjugative element protein, PFL_4669 family 10 228 6.4E-83 T 22-04-2016 IPR014996 Integrating conjugative element protein, PFL4669 YE3510 b5586129b6909550300566a1f1fee2d8 252 Pfam PF08900 Domain of unknown function (DUF1845) 9 225 7.1E-68 T 22-04-2016 IPR014996 Integrating conjugative element protein, PFL4669 YE0649 ebe41a0adc6c33989b7a678bc291897e 420 Pfam PF03222 Tryptophan/tyrosine permease family 16 409 3.6E-151 T 22-04-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 YE0649 ebe41a0adc6c33989b7a678bc291897e 420 PANTHER PTHR32195:SF18 16 417 3.0E-200 T 22-04-2016 YE0649 ebe41a0adc6c33989b7a678bc291897e 420 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 22 402 5.0E-157 T 22-04-2016 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 YE0649 ebe41a0adc6c33989b7a678bc291897e 420 PANTHER PTHR32195 16 417 3.0E-200 T 22-04-2016 YE0649 ebe41a0adc6c33989b7a678bc291897e 420 PRINTS PR00166 Aromatic amino acid permease signature 239 258 3.5E-105 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YE0649 ebe41a0adc6c33989b7a678bc291897e 420 PRINTS PR00166 Aromatic amino acid permease signature 334 352 3.5E-105 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YE0649 ebe41a0adc6c33989b7a678bc291897e 420 PRINTS PR00166 Aromatic amino acid permease signature 25 48 3.5E-105 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YE0649 ebe41a0adc6c33989b7a678bc291897e 420 PRINTS PR00166 Aromatic amino acid permease signature 97 117 3.5E-105 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YE0649 ebe41a0adc6c33989b7a678bc291897e 420 PRINTS PR00166 Aromatic amino acid permease signature 200 222 3.5E-105 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YE0649 ebe41a0adc6c33989b7a678bc291897e 420 PRINTS PR00166 Aromatic amino acid permease signature 355 374 3.5E-105 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YE0649 ebe41a0adc6c33989b7a678bc291897e 420 PRINTS PR00166 Aromatic amino acid permease signature 162 182 3.5E-105 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YE0649 ebe41a0adc6c33989b7a678bc291897e 420 PRINTS PR00166 Aromatic amino acid permease signature 300 319 3.5E-105 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YE0649 ebe41a0adc6c33989b7a678bc291897e 420 PRINTS PR00166 Aromatic amino acid permease signature 52 71 3.5E-105 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YE0538 90c5c62f1122bf8da33abfb92b584c27 444 Pfam PF01609 Transposase DDE domain 128 352 1.6E-30 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 YE0538 90c5c62f1122bf8da33abfb92b584c27 444 Pfam PF13006 Insertion element 4 transposase N-terminal 19 108 1.3E-30 T 22-04-2016 IPR024473 Transposase, IS4, N-terminal YE0538 90c5c62f1122bf8da33abfb92b584c27 444 PANTHER PTHR37529 3 431 7.1E-77 T 22-04-2016 YE0538 90c5c62f1122bf8da33abfb92b584c27 444 SUPERFAMILY SSF53098 108 408 3.79E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE1562 90c5c62f1122bf8da33abfb92b584c27 444 Pfam PF01609 Transposase DDE domain 128 352 1.6E-30 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 YE1562 90c5c62f1122bf8da33abfb92b584c27 444 Pfam PF13006 Insertion element 4 transposase N-terminal 19 108 1.3E-30 T 22-04-2016 IPR024473 Transposase, IS4, N-terminal YE1562 90c5c62f1122bf8da33abfb92b584c27 444 PANTHER PTHR37529 3 431 7.1E-77 T 22-04-2016 YE1562 90c5c62f1122bf8da33abfb92b584c27 444 SUPERFAMILY SSF53098 108 408 3.79E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE0090 90c5c62f1122bf8da33abfb92b584c27 444 Pfam PF01609 Transposase DDE domain 128 352 1.6E-30 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 YE0090 90c5c62f1122bf8da33abfb92b584c27 444 Pfam PF13006 Insertion element 4 transposase N-terminal 19 108 1.3E-30 T 22-04-2016 IPR024473 Transposase, IS4, N-terminal YE0090 90c5c62f1122bf8da33abfb92b584c27 444 PANTHER PTHR37529 3 431 7.1E-77 T 22-04-2016 YE0090 90c5c62f1122bf8da33abfb92b584c27 444 SUPERFAMILY SSF53098 108 408 3.79E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE0203 f77cfed2a82c4d8549500757e5e8488e 292 Gene3D G3DSA:2.40.230.10 37 291 1.2E-102 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 YE0203 f77cfed2a82c4d8549500757e5e8488e 292 Pfam PF02253 Phospholipase A1 43 288 4.1E-96 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 YE0203 f77cfed2a82c4d8549500757e5e8488e 292 SUPERFAMILY SSF56931 39 291 6.15E-93 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 YE0203 f77cfed2a82c4d8549500757e5e8488e 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 103 119 6.8E-84 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 YE0203 f77cfed2a82c4d8549500757e5e8488e 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 239 256 6.8E-84 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 YE0203 f77cfed2a82c4d8549500757e5e8488e 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 206 224 6.8E-84 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 YE0203 f77cfed2a82c4d8549500757e5e8488e 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 126 145 6.8E-84 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 YE0203 f77cfed2a82c4d8549500757e5e8488e 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 156 170 6.8E-84 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 YE0203 f77cfed2a82c4d8549500757e5e8488e 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 81 98 6.8E-84 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 YE0203 f77cfed2a82c4d8549500757e5e8488e 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 261 281 6.8E-84 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 YE0203 f77cfed2a82c4d8549500757e5e8488e 292 PRINTS PR01486 Bacterial phospholipase A1 protein signature 171 189 6.8E-84 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 YE0203 f77cfed2a82c4d8549500757e5e8488e 292 PANTHER PTHR40457 1 292 4.3E-169 T 22-04-2016 YE3104 2d127b6a6894c26bda55a262eba9b2c3 421 Gene3D G3DSA:3.40.720.10 2 105 8.9E-52 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 YE3104 2d127b6a6894c26bda55a262eba9b2c3 421 Gene3D G3DSA:3.40.720.10 243 416 8.9E-52 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 YE3104 2d127b6a6894c26bda55a262eba9b2c3 421 PANTHER PTHR21110 2 222 6.2E-79 T 22-04-2016 YE3104 2d127b6a6894c26bda55a262eba9b2c3 421 PANTHER PTHR21110 245 418 6.2E-79 T 22-04-2016 YE3104 2d127b6a6894c26bda55a262eba9b2c3 421 Pfam PF01676 Metalloenzyme superfamily 3 402 3.0E-38 T 22-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 YE3104 2d127b6a6894c26bda55a262eba9b2c3 421 SUPERFAMILY SSF53649 240 416 2.22E-48 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 YE3104 2d127b6a6894c26bda55a262eba9b2c3 421 SUPERFAMILY SSF53649 2 105 2.22E-48 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 YE3104 2d127b6a6894c26bda55a262eba9b2c3 421 PANTHER PTHR21110:SF0 2 222 6.2E-79 T 22-04-2016 YE3104 2d127b6a6894c26bda55a262eba9b2c3 421 PANTHER PTHR21110:SF0 245 418 6.2E-79 T 22-04-2016 YE3104 2d127b6a6894c26bda55a262eba9b2c3 421 PIRSF PIRSF001491 1 417 8.5E-103 T 22-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 YE3303 c362a36340dad228e96277e86049eb4a 415 Pfam PF00266 Aminotransferase class-V 35 402 1.1E-137 T 22-04-2016 IPR000192 Aminotransferase class V domain YE3303 c362a36340dad228e96277e86049eb4a 415 PANTHER PTHR11601:SF44 1 415 3.4E-279 T 22-04-2016 YE3303 c362a36340dad228e96277e86049eb4a 415 PANTHER PTHR11601 1 415 3.4E-279 T 22-04-2016 YE3303 c362a36340dad228e96277e86049eb4a 415 SUPERFAMILY SSF53383 19 411 4.79E-109 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YE3303 c362a36340dad228e96277e86049eb4a 415 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 227 246 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site YE3303 c362a36340dad228e96277e86049eb4a 415 Gene3D G3DSA:3.90.1150.10 294 408 1.8E-23 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YE3303 c362a36340dad228e96277e86049eb4a 415 TIGRFAM TIGR03392 FeS_syn_CsdA: cysteine desulfurase, catalytic subunit CsdA 18 415 5.7E-228 T 22-04-2016 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA GO:0016226|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 YE3303 c362a36340dad228e96277e86049eb4a 415 Gene3D G3DSA:3.40.640.10 47 293 7.1E-75 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YE0152 1488d36cb127f5bfb6a8ff1e2a237e95 514 SUPERFAMILY SSF53686 15 365 5.5E-98 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YE0152 1488d36cb127f5bfb6a8ff1e2a237e95 514 Gene3D G3DSA:3.40.1020.10 339 512 3.3E-58 T 22-04-2016 YE0152 1488d36cb127f5bfb6a8ff1e2a237e95 514 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 30 316 1.5E-72 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YE0152 1488d36cb127f5bfb6a8ff1e2a237e95 514 PANTHER PTHR10314 8 368 5.1E-196 T 22-04-2016 YE0152 1488d36cb127f5bfb6a8ff1e2a237e95 514 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 15 512 6.4E-262 T 22-04-2016 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 YE0152 1488d36cb127f5bfb6a8ff1e2a237e95 514 SUPERFAMILY SSF55021 336 423 3.36E-28 T 22-04-2016 YE0152 1488d36cb127f5bfb6a8ff1e2a237e95 514 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 425 512 6.6E-27 T 22-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 YE0152 1488d36cb127f5bfb6a8ff1e2a237e95 514 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 329 419 2.6E-28 T 22-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 YE0152 1488d36cb127f5bfb6a8ff1e2a237e95 514 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 53 66 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 YE0152 1488d36cb127f5bfb6a8ff1e2a237e95 514 Gene3D G3DSA:3.40.50.1100 81 333 1.3E-76 T 22-04-2016 YE0152 1488d36cb127f5bfb6a8ff1e2a237e95 514 SUPERFAMILY SSF55021 420 512 6.64E-27 T 22-04-2016 YE0152 1488d36cb127f5bfb6a8ff1e2a237e95 514 PANTHER PTHR10314:SF30 8 368 5.1E-196 T 22-04-2016 YE0272 d69f4acd36d66fb70c95ecfb7f3a4e88 483 PANTHER PTHR32024:SF2 1 483 3.9E-281 T 22-04-2016 YE0272 d69f4acd36d66fb70c95ecfb7f3a4e88 483 PIRSF PIRSF006247 1 483 7.6E-183 T 22-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 YE0272 d69f4acd36d66fb70c95ecfb7f3a4e88 483 PANTHER PTHR32024 1 483 3.9E-281 T 22-04-2016 YE0272 d69f4acd36d66fb70c95ecfb7f3a4e88 483 Pfam PF02386 Cation transport protein 37 477 6.8E-92 T 22-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 YE0272 d69f4acd36d66fb70c95ecfb7f3a4e88 483 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 84 466 1.6E-126 T 22-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 YE4080 bd956d022eb9fe3ba020ea958e365974 326 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 315 1.0E-25 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 YE4080 bd956d022eb9fe3ba020ea958e365974 326 Gene3D G3DSA:3.40.50.300 2 255 1.5E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE4080 bd956d022eb9fe3ba020ea958e365974 326 SMART SM00382 32 231 3.0E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain YE4080 bd956d022eb9fe3ba020ea958e365974 326 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE4080 bd956d022eb9fe3ba020ea958e365974 326 Pfam PF00005 ABC transporter 24 181 3.5E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE4080 bd956d022eb9fe3ba020ea958e365974 326 PANTHER PTHR24220:SF576 5 320 1.5E-223 T 22-04-2016 YE4080 bd956d022eb9fe3ba020ea958e365974 326 PANTHER PTHR24220 5 320 1.5E-223 T 22-04-2016 YE4080 bd956d022eb9fe3ba020ea958e365974 326 SUPERFAMILY SSF52540 3 253 8.99E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE4080 bd956d022eb9fe3ba020ea958e365974 326 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 8.0E-19 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 YE1020 37b68e895b60cd17b88abd6103f3e0e1 243 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 239 6.8E-104 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 YE1020 37b68e895b60cd17b88abd6103f3e0e1 243 SUPERFAMILY SSF63892 4 242 2.35E-100 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 YE1020 37b68e895b60cd17b88abd6103f3e0e1 243 PANTHER PTHR30456 2 243 9.2E-147 T 22-04-2016 YE1020 37b68e895b60cd17b88abd6103f3e0e1 243 Gene3D G3DSA:3.20.20.70 4 242 2.0E-109 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YE1020 37b68e895b60cd17b88abd6103f3e0e1 243 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 7.5E-103 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 YE1020 37b68e895b60cd17b88abd6103f3e0e1 243 PANTHER PTHR30456:SF0 2 243 9.2E-147 T 22-04-2016 YE1020 37b68e895b60cd17b88abd6103f3e0e1 243 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 132.684 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 YE0130 e4e64360d0e454ba905819dfee57d7bc 397 PANTHER PTHR35404 2 397 1.2E-70 T 22-04-2016 YE0130 e4e64360d0e454ba905819dfee57d7bc 397 SUPERFAMILY SSF53098 14 371 1.9E-38 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE0130 e4e64360d0e454ba905819dfee57d7bc 397 Pfam PF01609 Transposase DDE domain 104 323 5.1E-20 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 YE2202 e4e64360d0e454ba905819dfee57d7bc 397 PANTHER PTHR35404 2 397 1.2E-70 T 22-04-2016 YE2202 e4e64360d0e454ba905819dfee57d7bc 397 SUPERFAMILY SSF53098 14 371 1.9E-38 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE2202 e4e64360d0e454ba905819dfee57d7bc 397 Pfam PF01609 Transposase DDE domain 104 323 5.1E-20 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 YE3793 b02cb0595fb4c07b875b0eb553a2254b 497 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 44 490 1.7E-205 T 22-04-2016 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 UniPathway: UPA00733 YE3793 b02cb0595fb4c07b875b0eb553a2254b 497 SUPERFAMILY SSF53720 24 495 2.36E-169 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 YE3793 b02cb0595fb4c07b875b0eb553a2254b 497 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 268 275 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 YE3793 b02cb0595fb4c07b875b0eb553a2254b 497 Gene3D G3DSA:3.40.309.10 282 467 4.2E-70 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 YE3793 b02cb0595fb4c07b875b0eb553a2254b 497 PANTHER PTHR11699:SF49 7 491 4.5E-276 T 22-04-2016 YE3793 b02cb0595fb4c07b875b0eb553a2254b 497 Pfam PF00171 Aldehyde dehydrogenase family 35 491 9.3E-172 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 YE3793 b02cb0595fb4c07b875b0eb553a2254b 497 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 296 307 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 YE3793 b02cb0595fb4c07b875b0eb553a2254b 497 PANTHER PTHR11699 7 491 4.5E-276 T 22-04-2016 YE3793 b02cb0595fb4c07b875b0eb553a2254b 497 Gene3D G3DSA:3.40.605.10 26 281 3.4E-102 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 YE1747 e9741266ca29b8b2e192ffc1e1b7700a 282 Gene3D G3DSA:1.10.510.10 140 219 6.4E-18 T 22-04-2016 YE1747 e9741266ca29b8b2e192ffc1e1b7700a 282 PANTHER PTHR10593:SF19 6 277 2.5E-151 T 22-04-2016 YE1747 e9741266ca29b8b2e192ffc1e1b7700a 282 Gene3D G3DSA:3.30.200.20 17 125 3.9E-12 T 22-04-2016 YE1747 e9741266ca29b8b2e192ffc1e1b7700a 282 SUPERFAMILY SSF56112 18 223 2.24E-21 T 22-04-2016 IPR011009 Protein kinase-like domain YE1747 e9741266ca29b8b2e192ffc1e1b7700a 282 ProSitePatterns PS01245 RIO1/ZK632.3/MJ0444 family signature. 164 175 - T 22-04-2016 IPR018935 RIO kinase, conserved site GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 YE1747 e9741266ca29b8b2e192ffc1e1b7700a 282 Pfam PF01163 RIO1 family 31 219 6.6E-43 T 22-04-2016 YE1747 e9741266ca29b8b2e192ffc1e1b7700a 282 SMART SM00090 5 228 4.4E-15 T 22-04-2016 IPR000687 RIO kinase GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 YE1747 e9741266ca29b8b2e192ffc1e1b7700a 282 PANTHER PTHR10593 6 277 2.5E-151 T 22-04-2016 YE3735 a74d0145896cc1dcd5bdb37733f3f77d 1536 Gene3D G3DSA:3.20.20.70 488 831 1.4E-100 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YE3735 a74d0145896cc1dcd5bdb37733f3f77d 1536 Gene3D G3DSA:3.60.20.10 62 483 1.8E-173 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal YE3735 a74d0145896cc1dcd5bdb37733f3f77d 1536 PANTHER PTHR11938:SF1 51 1526 0.0 T 22-04-2016 YE3735 a74d0145896cc1dcd5bdb37733f3f77d 1536 Gene3D G3DSA:3.20.20.70 862 1248 3.4E-166 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YE3735 a74d0145896cc1dcd5bdb37733f3f77d 1536 PANTHER PTHR11938 51 1526 0.0 T 22-04-2016 YE3735 a74d0145896cc1dcd5bdb37733f3f77d 1536 SUPERFAMILY SSF69336 1261 1515 1.96E-89 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 YE3735 a74d0145896cc1dcd5bdb37733f3f77d 1536 Pfam PF01493 GXGXG motif 1286 1469 3.9E-76 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 YE3735 a74d0145896cc1dcd5bdb37733f3f77d 1536 SUPERFAMILY SSF51395 484 1238 1.47E-251 T 22-04-2016 YE3735 a74d0145896cc1dcd5bdb37733f3f77d 1536 Pfam PF00310 Glutamine amidotransferases class-II 62 475 2.3E-177 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain YE3735 a74d0145896cc1dcd5bdb37733f3f77d 1536 Gene3D G3DSA:2.160.20.60 1260 1515 5.8E-98 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 YE3735 a74d0145896cc1dcd5bdb37733f3f77d 1536 Pfam PF01645 Conserved region in glutamate synthase 843 1206 3.2E-157 T 22-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 YE3735 a74d0145896cc1dcd5bdb37733f3f77d 1536 SUPERFAMILY SSF56235 62 479 1.29E-150 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal YE3735 a74d0145896cc1dcd5bdb37733f3f77d 1536 Pfam PF04898 Glutamate synthase central domain 507 787 6.8E-104 T 22-04-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 YE0717 b15ab9b056e1a8d9f12c76cf4bf9a62b 396 SUPERFAMILY SSF88713 166 363 3.61E-29 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 YE0717 b15ab9b056e1a8d9f12c76cf4bf9a62b 396 PANTHER PTHR34216 89 380 1.7E-115 T 22-04-2016 YE0717 b15ab9b056e1a8d9f12c76cf4bf9a62b 396 PANTHER PTHR34216:SF1 89 380 1.7E-115 T 22-04-2016 YE0717 b15ab9b056e1a8d9f12c76cf4bf9a62b 396 Gene3D G3DSA:3.20.20.370 177 347 1.7E-22 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 YE0717 b15ab9b056e1a8d9f12c76cf4bf9a62b 396 Pfam PF01522 Polysaccharide deacetylase 203 341 9.6E-19 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 YE1049 453a9f46c27b8b34180907e521525a64 385 Pfam PF12832 MFS_1 like family 8 360 1.6E-48 T 22-04-2016 IPR024989 Major facilitator superfamily associated domain YE1049 453a9f46c27b8b34180907e521525a64 385 SUPERFAMILY SSF103473 7 372 1.57E-37 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE1049 453a9f46c27b8b34180907e521525a64 385 Gene3D G3DSA:1.20.1250.20 198 372 1.1E-22 T 22-04-2016 YE1049 453a9f46c27b8b34180907e521525a64 385 Gene3D G3DSA:1.20.1250.20 8 179 1.7E-10 T 22-04-2016 YE1049 453a9f46c27b8b34180907e521525a64 385 PANTHER PTHR23522 1 383 2.3E-149 T 22-04-2016 YE1049 453a9f46c27b8b34180907e521525a64 385 PIRSF PIRSF004925 1 384 2.4E-110 T 22-04-2016 IPR026032 Probable 3-phenylpropionic acid transporter YE1049 453a9f46c27b8b34180907e521525a64 385 PANTHER PTHR23522:SF3 1 383 2.3E-149 T 22-04-2016 YE4133 158c7c78dec9c5b6fe876c092af90624 216 Gene3D G3DSA:1.20.950.20 1 214 9.4E-76 T 22-04-2016 YE4133 158c7c78dec9c5b6fe876c092af90624 216 Pfam PF01292 Prokaryotic cytochrome b561 9 184 6.2E-23 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 YE4133 158c7c78dec9c5b6fe876c092af90624 216 SUPERFAMILY SSF81342 4 211 2.28E-56 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 YE4133 158c7c78dec9c5b6fe876c092af90624 216 PANTHER PTHR30074 1 216 3.1E-97 T 22-04-2016 YE4133 158c7c78dec9c5b6fe876c092af90624 216 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 6 204 8.8E-66 T 22-04-2016 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 YE0892 b64e7d2cdcf187c56644a9036da14115 243 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 26 242 5.4E-68 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase YE0892 b64e7d2cdcf187c56644a9036da14115 243 Gene3D G3DSA:3.60.140.10 3 242 1.3E-93 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase YE0892 b64e7d2cdcf187c56644a9036da14115 243 PANTHER PTHR30616:SF3 1 243 2.0E-147 T 22-04-2016 YE0892 b64e7d2cdcf187c56644a9036da14115 243 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 20 241 7.1E-74 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase YE0892 b64e7d2cdcf187c56644a9036da14115 243 PANTHER PTHR30616 1 243 2.0E-147 T 22-04-2016 YE0892 b64e7d2cdcf187c56644a9036da14115 243 SUPERFAMILY SSF64438 3 242 2.38E-88 T 22-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic YE1024 d8b5e4d7223ce880d3ca1e15f3a069ed 86 PANTHER PTHR24960 1 85 1.1E-30 T 22-04-2016 YE1024 d8b5e4d7223ce880d3ca1e15f3a069ed 86 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YE1024 d8b5e4d7223ce880d3ca1e15f3a069ed 86 Pfam PF12838 4Fe-4S dicluster domain 8 56 2.0E-6 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YE1024 d8b5e4d7223ce880d3ca1e15f3a069ed 86 PANTHER PTHR24960:SF38 1 85 1.1E-30 T 22-04-2016 YE1024 d8b5e4d7223ce880d3ca1e15f3a069ed 86 SUPERFAMILY SSF54862 5 72 2.09E-17 T 22-04-2016 YE1024 d8b5e4d7223ce880d3ca1e15f3a069ed 86 Gene3D G3DSA:3.30.70.20 4 73 2.4E-16 T 22-04-2016 YE0421 223ba7b7b3b87e9e63439cdf175b3a51 390 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 22-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 YE0421 223ba7b7b3b87e9e63439cdf175b3a51 390 Hamap MF_01454 GTPase Obg [obg]. 2 333 48.219 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 YE0421 223ba7b7b3b87e9e63439cdf175b3a51 390 Pfam PF01018 GTP1/OBG 3 156 2.5E-60 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 YE0421 223ba7b7b3b87e9e63439cdf175b3a51 390 Gene3D G3DSA:3.40.50.300 160 346 6.3E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0421 223ba7b7b3b87e9e63439cdf175b3a51 390 PIRSF PIRSF002401 1 378 1.3E-140 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 YE0421 223ba7b7b3b87e9e63439cdf175b3a51 390 PANTHER PTHR11702 1 378 5.8E-199 T 22-04-2016 YE0421 223ba7b7b3b87e9e63439cdf175b3a51 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 3.0E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YE0421 223ba7b7b3b87e9e63439cdf175b3a51 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 3.0E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YE0421 223ba7b7b3b87e9e63439cdf175b3a51 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 3.0E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YE0421 223ba7b7b3b87e9e63439cdf175b3a51 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 3.0E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YE0421 223ba7b7b3b87e9e63439cdf175b3a51 390 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 1.8E-146 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 YE0421 223ba7b7b3b87e9e63439cdf175b3a51 390 PANTHER PTHR11702:SF3 1 378 5.8E-199 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 YE0421 223ba7b7b3b87e9e63439cdf175b3a51 390 Gene3D G3DSA:2.70.210.12 2 156 4.3E-61 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 YE0421 223ba7b7b3b87e9e63439cdf175b3a51 390 Pfam PF01926 50S ribosome-binding GTPase 162 284 8.4E-24 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 YE0421 223ba7b7b3b87e9e63439cdf175b3a51 390 SUPERFAMILY SSF82051 2 157 3.79E-57 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 YE0421 223ba7b7b3b87e9e63439cdf175b3a51 390 SUPERFAMILY SSF52540 151 338 1.33E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3331 cafc68708977a5900885d71ed7a39dad 356 SUPERFAMILY SSF53822 60 333 1.08E-85 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YE3331 cafc68708977a5900885d71ed7a39dad 356 PANTHER PTHR30146:SF57 1 341 2.6E-264 T 22-04-2016 YE3331 cafc68708977a5900885d71ed7a39dad 356 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.5E-7 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE3331 cafc68708977a5900885d71ed7a39dad 356 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.5E-7 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE3331 cafc68708977a5900885d71ed7a39dad 356 Gene3D G3DSA:3.40.50.2300 58 166 3.2E-47 T 22-04-2016 YE3331 cafc68708977a5900885d71ed7a39dad 356 Gene3D G3DSA:1.10.260.40 2 57 2.8E-25 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE3331 cafc68708977a5900885d71ed7a39dad 356 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE3331 cafc68708977a5900885d71ed7a39dad 356 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 8.7E-21 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE3331 cafc68708977a5900885d71ed7a39dad 356 PANTHER PTHR30146 1 341 2.6E-264 T 22-04-2016 YE3331 cafc68708977a5900885d71ed7a39dad 356 SUPERFAMILY SSF47413 1 59 1.41E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE3331 cafc68708977a5900885d71ed7a39dad 356 SMART SM00354 1 71 9.3E-37 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE3331 cafc68708977a5900885d71ed7a39dad 356 Pfam PF13377 Periplasmic binding protein-like domain 168 329 2.0E-34 T 22-04-2016 YE3331 cafc68708977a5900885d71ed7a39dad 356 Gene3D G3DSA:3.40.50.2300 167 330 5.1E-51 T 22-04-2016 YE3746 43877f3a4fa9a18f9eb2bd3f7e44b76a 422 Gene3D G3DSA:3.65.10.10 223 419 1.9E-62 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 YE3746 43877f3a4fa9a18f9eb2bd3f7e44b76a 422 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 418 2.3E-182 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YE3746 43877f3a4fa9a18f9eb2bd3f7e44b76a 422 PANTHER PTHR21090 1 422 5.8E-224 T 22-04-2016 YE3746 43877f3a4fa9a18f9eb2bd3f7e44b76a 422 Gene3D G3DSA:3.65.10.10 21 222 2.4E-68 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 YE3746 43877f3a4fa9a18f9eb2bd3f7e44b76a 422 SUPERFAMILY SSF55205 1 421 9.65E-145 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 YE3746 43877f3a4fa9a18f9eb2bd3f7e44b76a 422 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 6 409 1.2E-125 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 YE3746 43877f3a4fa9a18f9eb2bd3f7e44b76a 422 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 419 46.532 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YE1000 ae14676dcd712caccb4e64df93c93dcf 192 Gene3D G3DSA:3.90.20.20 41 131 6.6E-29 T 22-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil YE1000 ae14676dcd712caccb4e64df93c93dcf 192 Gene3D G3DSA:2.30.22.10 133 191 2.1E-25 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 YE1000 ae14676dcd712caccb4e64df93c93dcf 192 Hamap MF_01151 Protein GrpE [grpE]. 4 189 21.627 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 YE1000 ae14676dcd712caccb4e64df93c93dcf 192 Pfam PF01025 GrpE 20 189 4.5E-49 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 YE1000 ae14676dcd712caccb4e64df93c93dcf 192 PANTHER PTHR21237 14 192 1.8E-59 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 YE1000 ae14676dcd712caccb4e64df93c93dcf 192 SUPERFAMILY SSF51064 134 190 1.11E-18 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 YE1000 ae14676dcd712caccb4e64df93c93dcf 192 PRINTS PR00773 GrpE protein signature 58 74 4.0E-27 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 YE1000 ae14676dcd712caccb4e64df93c93dcf 192 PRINTS PR00773 GrpE protein signature 141 156 4.0E-27 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 YE1000 ae14676dcd712caccb4e64df93c93dcf 192 PRINTS PR00773 GrpE protein signature 86 101 4.0E-27 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 YE1000 ae14676dcd712caccb4e64df93c93dcf 192 PRINTS PR00773 GrpE protein signature 168 187 4.0E-27 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 YE1000 ae14676dcd712caccb4e64df93c93dcf 192 SUPERFAMILY SSF58014 43 133 6.15E-27 T 22-04-2016 YE1000 ae14676dcd712caccb4e64df93c93dcf 192 ProSitePatterns PS01071 grpE protein signature. 144 187 - T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 YE3596 cbb086e097a67d64092700cd9719efc7 400 SUPERFAMILY SSF111369 66 314 1.19E-57 T 22-04-2016 YE3596 cbb086e097a67d64092700cd9719efc7 400 Gene3D G3DSA:2.40.50.100 76 109 3.0E-17 T 22-04-2016 YE3596 cbb086e097a67d64092700cd9719efc7 400 Gene3D G3DSA:2.40.50.100 184 217 3.0E-17 T 22-04-2016 YE3596 cbb086e097a67d64092700cd9719efc7 400 PANTHER PTHR30158:SF2 9 394 1.3E-151 T 22-04-2016 YE3596 cbb086e097a67d64092700cd9719efc7 400 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 68 233 1.8E-9 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YE3596 cbb086e097a67d64092700cd9719efc7 400 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 51 391 1.4E-75 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 YE3596 cbb086e097a67d64092700cd9719efc7 400 PANTHER PTHR30158 9 394 1.3E-151 T 22-04-2016 YE0103 bff966c3d3d3423d377fbab185cf0bfb 284 PANTHER PTHR13929 1 284 4.5E-85 T 22-04-2016 YE0103 bff966c3d3d3423d377fbab185cf0bfb 284 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 1 281 18.533 T 22-04-2016 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 YE0103 bff966c3d3d3423d377fbab185cf0bfb 284 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 1 280 5.3E-124 T 22-04-2016 YE0103 bff966c3d3d3423d377fbab185cf0bfb 284 Pfam PF01040 UbiA prenyltransferase family 8 253 1.8E-35 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 YE0103 bff966c3d3d3423d377fbab185cf0bfb 284 PIRSF PIRSF005355 1 284 2.2E-79 T 22-04-2016 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 YE0103 bff966c3d3d3423d377fbab185cf0bfb 284 PANTHER PTHR13929:SF0 1 284 4.5E-85 T 22-04-2016 YE1253 e9e3db590b8fb003f386e086abed2025 184 SUPERFAMILY SSF81342 5 180 1.49E-37 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 YE1253 e9e3db590b8fb003f386e086abed2025 184 PANTHER PTHR30529 3 184 2.4E-90 T 22-04-2016 YE1253 e9e3db590b8fb003f386e086abed2025 184 Pfam PF01292 Prokaryotic cytochrome b561 10 180 1.4E-25 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 YE1253 e9e3db590b8fb003f386e086abed2025 184 Gene3D G3DSA:1.20.950.20 84 170 5.8E-6 T 22-04-2016 YE1253 e9e3db590b8fb003f386e086abed2025 184 PANTHER PTHR30529:SF5 3 184 2.4E-90 T 22-04-2016 YE2676 eb46b80f69503ac3d39dab0ceda8f5e6 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 263 6.5E-60 T 22-04-2016 IPR023214 HAD-like domain YE2676 eb46b80f69503ac3d39dab0ceda8f5e6 269 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 22-04-2016 IPR000150 Cof protein GO:0016787 YE2676 eb46b80f69503ac3d39dab0ceda8f5e6 269 SUPERFAMILY SSF56784 1 266 1.32E-63 T 22-04-2016 IPR023214 HAD-like domain YE2676 eb46b80f69503ac3d39dab0ceda8f5e6 269 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 263 1.1E-53 T 22-04-2016 IPR000150 Cof protein GO:0016787 YE2676 eb46b80f69503ac3d39dab0ceda8f5e6 269 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 236 1.0E-21 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 YE2676 eb46b80f69503ac3d39dab0ceda8f5e6 269 Gene3D G3DSA:3.30.1240.10 90 181 7.8E-21 T 22-04-2016 YE2676 eb46b80f69503ac3d39dab0ceda8f5e6 269 PANTHER PTHR10000 1 269 1.9E-61 T 22-04-2016 YE2676 eb46b80f69503ac3d39dab0ceda8f5e6 269 PANTHER PTHR10000:SF16 1 269 1.9E-61 T 22-04-2016 YE2676 eb46b80f69503ac3d39dab0ceda8f5e6 269 Gene3D G3DSA:3.40.50.1000 1 75 2.7E-48 T 22-04-2016 IPR023214 HAD-like domain YE2676 eb46b80f69503ac3d39dab0ceda8f5e6 269 Gene3D G3DSA:3.40.50.1000 182 266 2.7E-48 T 22-04-2016 IPR023214 HAD-like domain YE2238 ed8a5f28e7ae0b45b566567126572d39 891 PANTHER PTHR11496 360 867 0.0 T 22-04-2016 YE2238 ed8a5f28e7ae0b45b566567126572d39 891 Gene3D G3DSA:3.40.605.10 4 225 3.2E-24 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 YE2238 ed8a5f28e7ae0b45b566567126572d39 891 PIRSF PIRSF000111 1 866 0.0 T 22-04-2016 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00592+1.1.1.1|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00650+1.2.1.10|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7085|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7180|MetaCyc: PWY-7396 YE2238 ed8a5f28e7ae0b45b566567126572d39 891 SUPERFAMILY SSF56796 451 864 6.02E-119 T 22-04-2016 YE2238 ed8a5f28e7ae0b45b566567126572d39 891 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 720 740 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 YE2238 ed8a5f28e7ae0b45b566567126572d39 891 Gene3D G3DSA:3.40.50.1970 450 643 9.8E-64 T 22-04-2016 YE2238 ed8a5f28e7ae0b45b566567126572d39 891 Gene3D G3DSA:1.20.1090.10 644 864 5.0E-69 T 22-04-2016 YE2238 ed8a5f28e7ae0b45b566567126572d39 891 Pfam PF00171 Aldehyde dehydrogenase family 5 399 4.5E-28 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 YE2238 ed8a5f28e7ae0b45b566567126572d39 891 Pfam PF00465 Iron-containing alcohol dehydrogenase 457 850 1.9E-113 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 YE2238 ed8a5f28e7ae0b45b566567126572d39 891 PANTHER PTHR11496:SF79 360 867 0.0 T 22-04-2016 YE2238 ed8a5f28e7ae0b45b566567126572d39 891 Gene3D G3DSA:3.40.309.10 226 273 1.1E-30 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 YE2238 ed8a5f28e7ae0b45b566567126572d39 891 Gene3D G3DSA:3.40.309.10 309 404 1.1E-30 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 YE2238 ed8a5f28e7ae0b45b566567126572d39 891 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 632 660 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 YE2238 ed8a5f28e7ae0b45b566567126572d39 891 SUPERFAMILY SSF53720 6 453 6.54E-84 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 YE0554 fdb6224451e2e31a8d1d9a6d1304783c 311 PRINTS PR00990 Ribokinase signature 216 227 2.4E-7 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 YE0554 fdb6224451e2e31a8d1d9a6d1304783c 311 PRINTS PR00990 Ribokinase signature 23 42 2.4E-7 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 YE0554 fdb6224451e2e31a8d1d9a6d1304783c 311 PRINTS PR00990 Ribokinase signature 176 191 2.4E-7 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 YE0554 fdb6224451e2e31a8d1d9a6d1304783c 311 PANTHER PTHR10584:SF161 1 308 2.2E-108 T 22-04-2016 YE0554 fdb6224451e2e31a8d1d9a6d1304783c 311 Gene3D G3DSA:3.40.1190.20 2 309 2.8E-84 T 22-04-2016 IPR029056 Ribokinase-like YE0554 fdb6224451e2e31a8d1d9a6d1304783c 311 Pfam PF00294 pfkB family carbohydrate kinase 3 299 2.7E-72 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB YE0554 fdb6224451e2e31a8d1d9a6d1304783c 311 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 28 52 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 YE0554 fdb6224451e2e31a8d1d9a6d1304783c 311 PANTHER PTHR10584 1 308 2.2E-108 T 22-04-2016 YE0554 fdb6224451e2e31a8d1d9a6d1304783c 311 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 245 258 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 YE0554 fdb6224451e2e31a8d1d9a6d1304783c 311 SUPERFAMILY SSF53613 2 307 9.2E-81 T 22-04-2016 IPR029056 Ribokinase-like YE1194 f87ea00ba192b0b2ccc9002612c59e12 342 PANTHER PTHR30368 11 342 2.7E-253 T 22-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 YE1194 f87ea00ba192b0b2ccc9002612c59e12 342 PANTHER PTHR30368:SF1 11 342 2.7E-253 T 22-04-2016 YE1194 f87ea00ba192b0b2ccc9002612c59e12 342 SUPERFAMILY SSF53850 29 336 6.22E-81 T 22-04-2016 YE1194 f87ea00ba192b0b2ccc9002612c59e12 342 Pfam PF13531 Bacterial extracellular solute-binding protein 51 290 7.3E-42 T 22-04-2016 YE1194 f87ea00ba192b0b2ccc9002612c59e12 342 Gene3D G3DSA:3.40.190.10 30 173 3.9E-43 T 22-04-2016 YE1194 f87ea00ba192b0b2ccc9002612c59e12 342 Gene3D G3DSA:3.40.190.10 181 305 4.9E-26 T 22-04-2016 YE1194 f87ea00ba192b0b2ccc9002612c59e12 342 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 25 336 8.4E-157 T 22-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 YE0874 04d10e4c578a6e064eb2ff04ef2dff5c 152 Pfam PF10772 Protein of unknown function (DUF2597) 10 142 2.1E-61 T 22-04-2016 IPR019708 Bacteriophage HP1, Orf24 YE4162 d796823b03d5a11b0f67f649b40dc8f2 552 Gene3D G3DSA:3.30.70.1450 294 361 3.5E-9 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YE4162 d796823b03d5a11b0f67f649b40dc8f2 552 Gene3D G3DSA:3.30.70.1450 215 271 6.6E-4 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YE4162 d796823b03d5a11b0f67f649b40dc8f2 552 Hamap MF_01016 Putative transport protein YidE [yidE]. 1 552 55.246 T 22-04-2016 IPR023018 Transport protein YidE, putative YE4162 d796823b03d5a11b0f67f649b40dc8f2 552 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 379 533 2.0E-49 T 22-04-2016 IPR006512 YidE/YbjL duplication YE4162 d796823b03d5a11b0f67f649b40dc8f2 552 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 16 166 1.8E-43 T 22-04-2016 IPR006512 YidE/YbjL duplication YE4162 d796823b03d5a11b0f67f649b40dc8f2 552 Pfam PF02080 TrkA-C domain 293 358 1.0E-8 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YE4162 d796823b03d5a11b0f67f649b40dc8f2 552 PANTHER PTHR30445:SF1 1 550 2.3E-284 T 22-04-2016 YE4162 d796823b03d5a11b0f67f649b40dc8f2 552 Pfam PF06826 Predicted Permease Membrane Region 10 179 3.4E-46 T 22-04-2016 IPR006512 YidE/YbjL duplication YE4162 d796823b03d5a11b0f67f649b40dc8f2 552 Pfam PF06826 Predicted Permease Membrane Region 374 546 7.5E-46 T 22-04-2016 IPR006512 YidE/YbjL duplication YE4162 d796823b03d5a11b0f67f649b40dc8f2 552 SUPERFAMILY SSF116726 206 271 4.45E-9 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YE4162 d796823b03d5a11b0f67f649b40dc8f2 552 PANTHER PTHR30445 1 550 2.3E-284 T 22-04-2016 YE4162 d796823b03d5a11b0f67f649b40dc8f2 552 SUPERFAMILY SSF116726 290 359 1.1E-11 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 YE1019 770f22810bd9b42c07df4a29a7d1e940 241 SUPERFAMILY SSF50249 4 75 1.88E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE1019 770f22810bd9b42c07df4a29a7d1e940 241 Hamap MF_00201 DNA repair protein RecO [recO]. 1 231 22.86 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 YE1019 770f22810bd9b42c07df4a29a7d1e940 241 SUPERFAMILY SSF57863 86 173 7.59E-9 T 22-04-2016 YE1019 770f22810bd9b42c07df4a29a7d1e940 241 TIGRFAM TIGR00613 reco: DNA repair protein RecO 5 230 1.9E-37 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 YE1019 770f22810bd9b42c07df4a29a7d1e940 241 Pfam PF11967 Recombination protein O N terminal 4 76 1.1E-22 T 22-04-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal YE1019 770f22810bd9b42c07df4a29a7d1e940 241 Gene3D G3DSA:2.40.50.140 6 75 3.5E-8 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE1019 770f22810bd9b42c07df4a29a7d1e940 241 Pfam PF02565 Recombination protein O C terminal 83 226 3.2E-23 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 YE1019 770f22810bd9b42c07df4a29a7d1e940 241 PANTHER PTHR33991 1 241 1.6E-67 T 22-04-2016 YE1378 5c10a325328876fb02dc02ce883f5983 323 SMART SM00922 115 210 1.5E-9 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal YE1378 5c10a325328876fb02dc02ce883f5983 323 PANTHER PTHR13794 6 312 2.1E-104 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 YE1378 5c10a325328876fb02dc02ce883f5983 323 Pfam PF13378 Enolase C-terminal domain-like 127 275 3.3E-15 T 22-04-2016 IPR029065 Enolase C-terminal domain-like YE1378 5c10a325328876fb02dc02ce883f5983 323 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 7 307 3.9E-115 T 22-04-2016 YE1378 5c10a325328876fb02dc02ce883f5983 323 SUPERFAMILY SSF51604 108 315 7.73E-51 T 22-04-2016 IPR029065 Enolase C-terminal domain-like YE1378 5c10a325328876fb02dc02ce883f5983 323 Gene3D G3DSA:3.30.390.10 1 121 2.7E-30 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YE1378 5c10a325328876fb02dc02ce883f5983 323 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 4 315 25.415 T 22-04-2016 IPR010196 o-succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00079|UniPathway: UPA01057 YE1378 5c10a325328876fb02dc02ce883f5983 323 SUPERFAMILY SSF54826 1 97 1.1E-28 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YE1378 5c10a325328876fb02dc02ce883f5983 323 Gene3D G3DSA:3.20.20.120 122 298 1.2E-49 T 22-04-2016 IPR029065 Enolase C-terminal domain-like YE1378 5c10a325328876fb02dc02ce883f5983 323 PANTHER PTHR13794:SF8 6 312 2.1E-104 T 22-04-2016 IPR010197 o-succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00079|UniPathway: UPA01057 YE1515 bf145f6c8732f179513ee40eb9663c0c 649 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE1515 bf145f6c8732f179513ee40eb9663c0c 649 Pfam PF02687 FtsX-like permease family 528 642 1.2E-19 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 YE1515 bf145f6c8732f179513ee40eb9663c0c 649 Pfam PF12704 MacB-like periplasmic core domain 273 491 1.1E-39 T 22-04-2016 IPR025857 MacB-like periplasmic core domain YE1515 bf145f6c8732f179513ee40eb9663c0c 649 PANTHER PTHR24220 6 238 3.0E-101 T 22-04-2016 YE1515 bf145f6c8732f179513ee40eb9663c0c 649 SUPERFAMILY SSF52540 4 225 9.98E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1515 bf145f6c8732f179513ee40eb9663c0c 649 PANTHER PTHR24220:SF86 6 238 3.0E-101 T 22-04-2016 YE1515 bf145f6c8732f179513ee40eb9663c0c 649 Pfam PF00005 ABC transporter 24 172 3.6E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE1515 bf145f6c8732f179513ee40eb9663c0c 649 Gene3D G3DSA:3.40.50.300 3 225 3.5E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1515 bf145f6c8732f179513ee40eb9663c0c 649 SMART SM00382 33 220 1.6E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain YE2146 5cf04eb17c571d6e3bccc78a9b24a28f 285 SUPERFAMILY SSF111369 43 214 1.96E-27 T 22-04-2016 YE2146 5cf04eb17c571d6e3bccc78a9b24a28f 285 Gene3D G3DSA:2.40.50.100 45 77 1.2E-16 T 22-04-2016 YE2146 5cf04eb17c571d6e3bccc78a9b24a28f 285 Gene3D G3DSA:2.40.50.100 151 185 1.2E-16 T 22-04-2016 YE2146 5cf04eb17c571d6e3bccc78a9b24a28f 285 Pfam PF13437 HlyD family secretion protein 154 233 4.7E-9 T 22-04-2016 YE2146 5cf04eb17c571d6e3bccc78a9b24a28f 285 Pfam PF13533 Biotin-lipoyl like 45 91 4.1E-15 T 22-04-2016 YE2146 5cf04eb17c571d6e3bccc78a9b24a28f 285 PANTHER PTHR30367:SF5 1 281 1.5E-119 T 22-04-2016 YE2146 5cf04eb17c571d6e3bccc78a9b24a28f 285 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 229 5.6E-38 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 YE2146 5cf04eb17c571d6e3bccc78a9b24a28f 285 PANTHER PTHR30367 1 281 1.5E-119 T 22-04-2016 YE2558 e57bce42e710442208e1862521210658 191 PANTHER PTHR30435 1 191 6.1E-59 T 22-04-2016 YE2558 e57bce42e710442208e1862521210658 191 PANTHER PTHR30435:SF15 1 191 6.1E-59 T 22-04-2016 YE2558 e57bce42e710442208e1862521210658 191 Pfam PF13861 FlgD Tudor-like domain 50 188 1.9E-19 T 22-04-2016 IPR025963 FlgD Tudor-like domain YE2558 e57bce42e710442208e1862521210658 191 Pfam PF03963 Flagellar hook capping protein - N-terminal region 1 42 8.4E-17 T 22-04-2016 IPR005648 Flagellar hook capping protein YE2558 e57bce42e710442208e1862521210658 191 Pfam PF13860 FlgD Ig-like domain 80 149 1.4E-21 T 22-04-2016 IPR025965 FlgD Ig-like domain YE0368 e4d5e4c4274f6db53f60a95c87c14a1a 350 Gene3D G3DSA:1.10.40.50 276 344 1.1E-27 T 22-04-2016 YE0368 e4d5e4c4274f6db53f60a95c87c14a1a 350 PANTHER PTHR32120:SF2 3 350 3.2E-170 T 22-04-2016 YE0368 e4d5e4c4274f6db53f60a95c87c14a1a 350 Pfam PF03193 Protein of unknown function, DUF258 99 276 1.3E-54 T 22-04-2016 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 YE0368 e4d5e4c4274f6db53f60a95c87c14a1a 350 PANTHER PTHR32120 3 350 3.2E-170 T 22-04-2016 YE0368 e4d5e4c4274f6db53f60a95c87c14a1a 350 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 72 334 1.1E-92 T 22-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 YE0368 e4d5e4c4274f6db53f60a95c87c14a1a 350 SUPERFAMILY SSF52540 113 340 2.12E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0368 e4d5e4c4274f6db53f60a95c87c14a1a 350 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 39 340 37.436 T 22-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 YE0368 e4d5e4c4274f6db53f60a95c87c14a1a 350 Gene3D G3DSA:3.40.50.300 114 275 8.9E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3366 8f4c36252bc9a47b2fb410c0cc180835 116 Pfam PF01022 Bacterial regulatory protein, arsR family 14 59 1.8E-16 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YE3366 8f4c36252bc9a47b2fb410c0cc180835 116 SUPERFAMILY SSF46785 3 103 3.81E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3366 8f4c36252bc9a47b2fb410c0cc180835 116 PANTHER PTHR33154 7 98 7.0E-25 T 22-04-2016 YE3366 8f4c36252bc9a47b2fb410c0cc180835 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 57 72 1.3E-25 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YE3366 8f4c36252bc9a47b2fb410c0cc180835 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 29 40 1.3E-25 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YE3366 8f4c36252bc9a47b2fb410c0cc180835 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 42 57 1.3E-25 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YE3366 8f4c36252bc9a47b2fb410c0cc180835 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 9 24 1.3E-25 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YE3366 8f4c36252bc9a47b2fb410c0cc180835 116 SMART SM00418 7 85 5.7E-29 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YE3366 8f4c36252bc9a47b2fb410c0cc180835 116 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 31 49 - T 22-04-2016 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 YE3366 8f4c36252bc9a47b2fb410c0cc180835 116 Gene3D G3DSA:1.10.10.10 7 103 5.7E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1168 57afbfff82ce00bc93b3152752ae3676 308 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 3 277 57.005 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YE1168 57afbfff82ce00bc93b3152752ae3676 308 PIRSF PIRSF000166 2 303 1.1E-127 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YE1168 57afbfff82ce00bc93b3152752ae3676 308 Pfam PF01218 Coproporphyrinogen III oxidase 9 302 1.3E-130 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YE1168 57afbfff82ce00bc93b3152752ae3676 308 Gene3D G3DSA:3.40.1500.10 6 302 4.4E-135 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YE1168 57afbfff82ce00bc93b3152752ae3676 308 PRINTS PR00073 Coprogen oxidase signature 125 147 7.2E-84 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YE1168 57afbfff82ce00bc93b3152752ae3676 308 PRINTS PR00073 Coprogen oxidase signature 48 69 7.2E-84 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YE1168 57afbfff82ce00bc93b3152752ae3676 308 PRINTS PR00073 Coprogen oxidase signature 90 114 7.2E-84 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YE1168 57afbfff82ce00bc93b3152752ae3676 308 PRINTS PR00073 Coprogen oxidase signature 31 47 7.2E-84 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YE1168 57afbfff82ce00bc93b3152752ae3676 308 PRINTS PR00073 Coprogen oxidase signature 262 288 7.2E-84 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YE1168 57afbfff82ce00bc93b3152752ae3676 308 PRINTS PR00073 Coprogen oxidase signature 162 191 7.2E-84 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YE1168 57afbfff82ce00bc93b3152752ae3676 308 PRINTS PR00073 Coprogen oxidase signature 234 261 7.2E-84 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YE1168 57afbfff82ce00bc93b3152752ae3676 308 SUPERFAMILY SSF102886 6 302 2.88E-138 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YE1168 57afbfff82ce00bc93b3152752ae3676 308 PANTHER PTHR10755 2 303 1.2E-187 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YE1168 57afbfff82ce00bc93b3152752ae3676 308 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 166 190 - T 22-04-2016 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 YE2953 02b74d488d0e947798610795e5fcf05d 245 Pfam PF03746 LamB/YcsF family 3 235 6.2E-94 T 22-04-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF YE2953 02b74d488d0e947798610795e5fcf05d 245 PANTHER PTHR30292:SF0 1 245 2.2E-131 T 22-04-2016 YE2953 02b74d488d0e947798610795e5fcf05d 245 SUPERFAMILY SSF88713 1 243 5.11E-93 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 YE2953 02b74d488d0e947798610795e5fcf05d 245 PANTHER PTHR30292 1 245 2.2E-131 T 22-04-2016 YE2953 02b74d488d0e947798610795e5fcf05d 245 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 1 240 43.049 T 22-04-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF YE2779 0c0b96ac752abbe4ec73c62d5fc6792f 528 Pfam PF03471 Transporter associated domain 442 519 2.0E-17 T 22-04-2016 IPR005170 Transporter-associated domain YE2779 0c0b96ac752abbe4ec73c62d5fc6792f 528 Pfam PF00571 CBS domain 304 360 0.0019 T 22-04-2016 IPR000644 CBS domain YE2779 0c0b96ac752abbe4ec73c62d5fc6792f 528 Pfam PF00571 CBS domain 375 424 2.6E-6 T 22-04-2016 IPR000644 CBS domain YE2779 0c0b96ac752abbe4ec73c62d5fc6792f 528 Gene3D G3DSA:3.10.580.10 290 426 9.9E-16 T 22-04-2016 YE2779 0c0b96ac752abbe4ec73c62d5fc6792f 528 PANTHER PTHR22777:SF14 1 528 0.0 T 22-04-2016 YE2779 0c0b96ac752abbe4ec73c62d5fc6792f 528 Gene3D G3DSA:3.30.465.10 436 519 6.1E-25 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 YE2779 0c0b96ac752abbe4ec73c62d5fc6792f 528 SUPERFAMILY SSF56176 439 523 2.15E-21 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 YE2779 0c0b96ac752abbe4ec73c62d5fc6792f 528 SMART SM01091 441 520 1.3E-25 T 22-04-2016 IPR005170 Transporter-associated domain YE2779 0c0b96ac752abbe4ec73c62d5fc6792f 528 Pfam PF03741 Integral membrane protein TerC family 15 203 2.3E-49 T 22-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 YE2779 0c0b96ac752abbe4ec73c62d5fc6792f 528 PANTHER PTHR22777 1 528 0.0 T 22-04-2016 YE2779 0c0b96ac752abbe4ec73c62d5fc6792f 528 SUPERFAMILY SSF54631 292 426 9.47E-25 T 22-04-2016 YE1284 261bb95873aba231df273206d80866da 180 Pfam PF04315 Elongation factor P hydroxylase 11 168 1.5E-79 T 22-04-2016 IPR007411 Elongation factor P hydroxylase KEGG: 00053+1.14.-.-|KEGG: 00073+1.14.-.-|KEGG: 00130+1.14.-.-|KEGG: 00253+1.14.-.-|KEGG: 00361+1.14.-.-|KEGG: 00363+1.14.-.-|KEGG: 00380+1.14.-.-|KEGG: 00522+1.14.-.-|KEGG: 00600+1.14.-.-|KEGG: 00624+1.14.-.-|KEGG: 00625+1.14.-.-|KEGG: 00627+1.14.-.-|KEGG: 00903+1.14.-.-|KEGG: 00904+1.14.-.-|KEGG: 00905+1.14.-.-|KEGG: 00906+1.14.-.-|KEGG: 00940+1.14.-.-|KEGG: 00945+1.14.-.-|KEGG: 00966+1.14.-.-|KEGG: 00981+1.14.-.- YE0611 4bf8cba556aba23e1e2a2571291d2d4b 392 Pfam PF06965 Na+/H+ antiporter 1 7 380 1.2E-151 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 YE0611 4bf8cba556aba23e1e2a2571291d2d4b 392 PANTHER PTHR30341:SF0 1 388 2.9E-213 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 YE0611 4bf8cba556aba23e1e2a2571291d2d4b 392 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 5 388 23.689 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 YE0611 4bf8cba556aba23e1e2a2571291d2d4b 392 PANTHER PTHR30341 1 388 2.9E-213 T 22-04-2016 YE0611 4bf8cba556aba23e1e2a2571291d2d4b 392 Gene3D G3DSA:1.20.1530.10 4 385 1.8E-158 T 22-04-2016 IPR023171 Na/H antiporter domain YE0611 4bf8cba556aba23e1e2a2571291d2d4b 392 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 8 380 7.9E-174 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 YE0468 e9812df3a3a26573bfb292608d8b6f99 209 SMART SM00859 3 95 0.0025 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 YE0468 e9812df3a3a26573bfb292608d8b6f99 209 PANTHER PTHR14097 2 208 4.4E-65 T 22-04-2016 YE0468 e9812df3a3a26573bfb292608d8b6f99 209 Gene3D G3DSA:3.40.50.720 2 207 2.1E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain YE0468 e9812df3a3a26573bfb292608d8b6f99 209 SUPERFAMILY SSF51735 1 199 3.36E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain YE0401 cb7b034048384c459a83cd0ca0a1f459 187 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 185 1.3E-81 T 22-04-2016 IPR006513 Conserved hypothetical protein CHP01626, YtfJ YE0401 cb7b034048384c459a83cd0ca0a1f459 187 Gene3D G3DSA:3.40.30.10 47 181 3.9E-6 T 22-04-2016 IPR012336 Thioredoxin-like fold YE0401 cb7b034048384c459a83cd0ca0a1f459 187 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 23 183 3.0E-76 T 22-04-2016 IPR006513 Conserved hypothetical protein CHP01626, YtfJ YE0823 ae7f9b89e0223422784037287aacb69a 314 PANTHER PTHR11624 41 310 4.0E-75 T 22-04-2016 IPR033247 Transketolase family YE0823 ae7f9b89e0223422784037287aacb69a 314 Gene3D G3DSA:3.40.50.920 182 310 1.1E-33 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 YE0823 ae7f9b89e0223422784037287aacb69a 314 Pfam PF02779 Transketolase, pyrimidine binding domain 43 167 2.2E-17 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain YE0823 ae7f9b89e0223422784037287aacb69a 314 Gene3D G3DSA:3.40.50.970 21 181 3.5E-37 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE0823 ae7f9b89e0223422784037287aacb69a 314 Pfam PF02780 Transketolase, C-terminal domain 181 303 3.3E-29 T 22-04-2016 IPR033248 Transketolase, C-terminal domain YE0823 ae7f9b89e0223422784037287aacb69a 314 SUPERFAMILY SSF52518 7 173 1.41E-34 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold YE0823 ae7f9b89e0223422784037287aacb69a 314 SUPERFAMILY SSF52922 176 311 3.01E-31 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 YE0823 ae7f9b89e0223422784037287aacb69a 314 SMART SM00861 1 171 8.6E-29 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain YE0823 ae7f9b89e0223422784037287aacb69a 314 PANTHER PTHR11624:SF2 41 310 4.0E-75 T 22-04-2016 YE0050 61e2fac51990ea7633d12504f8b2fb95 183 Pfam PF12098 Protein of unknown function (DUF3574) 84 183 6.0E-37 T 22-04-2016 IPR021957 Protein of unknown function DUF3574 YE3808 a94382456692f0a1d0a718290bb22fc4 344 PANTHER PTHR19372 8 339 1.0E-196 T 22-04-2016 YE3808 a94382456692f0a1d0a718290bb22fc4 344 SUPERFAMILY SSF56524 78 340 1.57E-93 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 YE3808 a94382456692f0a1d0a718290bb22fc4 344 Hamap MF_01206 Sulfoxide reductase catalytic subunit YedY [yedY]. 14 344 61.256 T 22-04-2016 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 YE3808 a94382456692f0a1d0a718290bb22fc4 344 Pfam PF00174 Oxidoreductase molybdopterin binding domain 118 277 3.9E-27 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 YE3808 a94382456692f0a1d0a718290bb22fc4 344 Gene3D G3DSA:3.90.420.10 80 342 3.5E-74 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 YE3808 a94382456692f0a1d0a718290bb22fc4 344 PANTHER PTHR19372:SF1 8 339 1.0E-196 T 22-04-2016 YE3281 b80f99fc11f02172c8c18180123f9c43 185 Pfam PF01765 Ribosome recycling factor 20 183 1.0E-61 T 22-04-2016 IPR023584 Ribosome recycling factor domain YE3281 b80f99fc11f02172c8c18180123f9c43 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.475 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 YE3281 b80f99fc11f02172c8c18180123f9c43 185 Gene3D G3DSA:1.10.132.20 67 184 1.7E-43 T 22-04-2016 IPR023584 Ribosome recycling factor domain YE3281 b80f99fc11f02172c8c18180123f9c43 185 SUPERFAMILY SSF55194 2 184 1.19E-69 T 22-04-2016 IPR023584 Ribosome recycling factor domain YE3281 b80f99fc11f02172c8c18180123f9c43 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 185 3.8E-78 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 YE3281 b80f99fc11f02172c8c18180123f9c43 185 PANTHER PTHR20982 1 185 1.2E-79 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 YE3494 2a712cdb128330a6c4ec8f83b1d8f040 164 Pfam PF11072 Protein of unknown function (DUF2859) 18 162 7.6E-47 T 22-04-2016 IPR021300 Integrating conjugative element protein, PFL4695 YE3494 2a712cdb128330a6c4ec8f83b1d8f040 164 TIGRFAM TIGR03765 ICE_PFL_4695: integrating conjugative element protein, PFL_4695 family 61 164 8.3E-41 T 22-04-2016 IPR021300 Integrating conjugative element protein, PFL4695 YE1785 7aade0b59eaba66ffd84fb8630c84ece 460 PANTHER PTHR24031:SF180 1 439 8.9E-265 T 22-04-2016 YE1785 7aade0b59eaba66ffd84fb8630c84ece 460 Pfam PF00271 Helicase conserved C-terminal domain 237 337 4.5E-27 T 22-04-2016 IPR001650 Helicase, C-terminal YE1785 7aade0b59eaba66ffd84fb8630c84ece 460 Hamap MF_00965 ATP-dependent RNA helicase DbpA [dbpA]. 6 460 72.131 T 22-04-2016 IPR028619 ATP-dependent RNA helicase DbpA GO:0000027|GO:0003724 YE1785 7aade0b59eaba66ffd84fb8630c84ece 460 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site YE1785 7aade0b59eaba66ffd84fb8630c84ece 460 SMART SM00487 23 220 4.8E-56 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain YE1785 7aade0b59eaba66ffd84fb8630c84ece 460 PANTHER PTHR24031 1 439 8.9E-265 T 22-04-2016 YE1785 7aade0b59eaba66ffd84fb8630c84ece 460 SUPERFAMILY SSF52540 74 357 2.84E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1785 7aade0b59eaba66ffd84fb8630c84ece 460 SMART SM00490 256 337 2.9E-30 T 22-04-2016 IPR001650 Helicase, C-terminal YE1785 7aade0b59eaba66ffd84fb8630c84ece 460 Gene3D G3DSA:3.40.50.300 3 206 2.7E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1785 7aade0b59eaba66ffd84fb8630c84ece 460 Gene3D G3DSA:3.40.50.300 207 371 7.0E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1785 7aade0b59eaba66ffd84fb8630c84ece 460 Pfam PF03880 DbpA RNA binding domain 387 457 8.4E-23 T 22-04-2016 IPR005580 DbpA, RNA-binding domain YE1785 7aade0b59eaba66ffd84fb8630c84ece 460 Pfam PF00270 DEAD/DEAH box helicase 28 193 8.9E-44 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 YE3673 c801966423a05db21a3081ac01901419 476 Gene3D G3DSA:3.40.1190.20 13 313 7.9E-68 T 22-04-2016 IPR029056 Ribokinase-like YE3673 c801966423a05db21a3081ac01901419 476 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 9.0E-18 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 YE3673 c801966423a05db21a3081ac01901419 476 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 331 472 1.9E-63 T 22-04-2016 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 YE3673 c801966423a05db21a3081ac01901419 476 SUPERFAMILY SSF53613 12 310 1.11E-57 T 22-04-2016 IPR029056 Ribokinase-like YE3673 c801966423a05db21a3081ac01901419 476 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 43.403 T 22-04-2016 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 YE3673 c801966423a05db21a3081ac01901419 476 SUPERFAMILY SSF52374 340 470 3.1E-22 T 22-04-2016 YE3673 c801966423a05db21a3081ac01901419 476 Gene3D G3DSA:3.40.50.620 340 461 1.0E-35 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YE3673 c801966423a05db21a3081ac01901419 476 Pfam PF00294 pfkB family carbohydrate kinase 13 305 9.1E-54 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB YE3673 c801966423a05db21a3081ac01901419 476 PANTHER PTHR10584 1 338 1.2E-156 T 22-04-2016 YE3673 c801966423a05db21a3081ac01901419 476 PANTHER PTHR10584:SF159 1 338 1.2E-156 T 22-04-2016 YE3673 c801966423a05db21a3081ac01901419 476 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 6 312 1.3E-128 T 22-04-2016 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 YE3673 c801966423a05db21a3081ac01901419 476 Pfam PF01467 Cytidylyltransferase-like 345 469 2.1E-15 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 YE3673 c801966423a05db21a3081ac01901419 476 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 YE1072 68b83f506aeb45f6c02569bab4a97906 322 SUPERFAMILY SSF47413 2 64 5.91E-8 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE1072 68b83f506aeb45f6c02569bab4a97906 322 Pfam PF13413 Helix-turn-helix domain 2 63 1.4E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE1072 68b83f506aeb45f6c02569bab4a97906 322 Pfam PF13464 Domain of unknown function (DUF4115) 245 319 6.2E-25 T 22-04-2016 IPR025194 Domain of unknown function DUF4115 YE1072 68b83f506aeb45f6c02569bab4a97906 322 PANTHER PTHR34475 2 319 4.2E-51 T 22-04-2016 YE1072 68b83f506aeb45f6c02569bab4a97906 322 Gene3D G3DSA:1.10.260.40 2 66 1.9E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE1072 68b83f506aeb45f6c02569bab4a97906 322 PANTHER PTHR34475:SF1 2 319 4.2E-51 T 22-04-2016 YE1072 68b83f506aeb45f6c02569bab4a97906 322 SMART SM00530 2 63 1.4E-7 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YE2737 51278fbdd45dd66943aa48df9ff19959 215 PANTHER PTHR39453:SF1 1 214 5.4E-92 T 22-04-2016 YE2737 51278fbdd45dd66943aa48df9ff19959 215 PANTHER PTHR39453 1 214 5.4E-92 T 22-04-2016 YE2737 51278fbdd45dd66943aa48df9ff19959 215 PIRSF PIRSF010130 1 208 1.8E-83 T 22-04-2016 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00561+2.3.1.22|KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013|MetaCyc: PWY-7420|UniPathway: UPA00621 YE2737 51278fbdd45dd66943aa48df9ff19959 215 Pfam PF06130 Phosphate propanoyltransferase 130 196 8.0E-17 T 22-04-2016 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00561+2.3.1.22|KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013|MetaCyc: PWY-7420|UniPathway: UPA00621 YE2737 51278fbdd45dd66943aa48df9ff19959 215 Pfam PF06130 Phosphate propanoyltransferase 23 101 9.7E-26 T 22-04-2016 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00561+2.3.1.22|KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013|MetaCyc: PWY-7420|UniPathway: UPA00621 YE4048 e9071f1b63bb852612c6e1bb651e708b 498 PANTHER PTHR11101:SF59 2 498 0.0 T 22-04-2016 YE4048 e9071f1b63bb852612c6e1bb651e708b 498 PANTHER PTHR11101 2 498 0.0 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 YE4048 e9071f1b63bb852612c6e1bb651e708b 498 Pfam PF01384 Phosphate transporter family 30 487 2.7E-88 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 YE2404 cae8908f0be59f0f3b7ec4c83ec260c0 186 SUPERFAMILY SSF54593 5 183 1.12E-66 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase YE2404 cae8908f0be59f0f3b7ec4c83ec260c0 186 PANTHER PTHR37519 2 185 1.0E-100 T 22-04-2016 YE2404 cae8908f0be59f0f3b7ec4c83ec260c0 186 PANTHER PTHR37519:SF1 2 185 1.0E-100 T 22-04-2016 YE2404 cae8908f0be59f0f3b7ec4c83ec260c0 186 Pfam PF06185 YecM protein 10 183 4.6E-69 T 22-04-2016 IPR010393 Protein of unknown function DUF991 YE2404 cae8908f0be59f0f3b7ec4c83ec260c0 186 Gene3D G3DSA:3.10.180.10 2 184 5.8E-73 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase YE0879 5e328f0dc071807572cf811d53a25ec7 685 Pfam PF10145 Phage-related minor tail protein 85 284 1.1E-20 T 22-04-2016 IPR010090 Phage tail tape measure protein YE0879 5e328f0dc071807572cf811d53a25ec7 685 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 58 388 1.0E-16 T 22-04-2016 IPR010090 Phage tail tape measure protein YE1493 3e0c4cfeed47996d908e1825d48a0b6a 222 Gene3D G3DSA:1.10.3720.10 3 214 3.4E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE1493 3e0c4cfeed47996d908e1825d48a0b6a 222 PANTHER PTHR30614 1 221 2.3E-156 T 22-04-2016 YE1493 3e0c4cfeed47996d908e1825d48a0b6a 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 41 215 1.4E-10 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE1493 3e0c4cfeed47996d908e1825d48a0b6a 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 5 110 1.2E-15 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 YE1493 3e0c4cfeed47996d908e1825d48a0b6a 222 PANTHER PTHR30614:SF10 1 221 2.3E-156 T 22-04-2016 YE1493 3e0c4cfeed47996d908e1825d48a0b6a 222 SUPERFAMILY SSF161098 6 201 4.71E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE0785 a39c850c5c7fdef68b8195c5a9269249 181 SUPERFAMILY SSF49401 33 180 5.97E-31 T 22-04-2016 IPR008966 Adhesion domain YE0785 a39c850c5c7fdef68b8195c5a9269249 181 Pfam PF00419 Fimbrial protein 36 180 1.2E-11 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YE0785 a39c850c5c7fdef68b8195c5a9269249 181 Gene3D G3DSA:2.60.40.1090 33 180 4.2E-35 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YE0785 a39c850c5c7fdef68b8195c5a9269249 181 PANTHER PTHR33420 6 181 3.7E-23 T 22-04-2016 YE1272 af2942ca48a9ef922da24c804a7cfaf2 254 PRINTS PR01805 VacJ lipoprotein signature 101 118 8.8E-33 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 YE1272 af2942ca48a9ef922da24c804a7cfaf2 254 PRINTS PR01805 VacJ lipoprotein signature 32 45 8.8E-33 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 YE1272 af2942ca48a9ef922da24c804a7cfaf2 254 PRINTS PR01805 VacJ lipoprotein signature 140 157 8.8E-33 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 YE1272 af2942ca48a9ef922da24c804a7cfaf2 254 PRINTS PR01805 VacJ lipoprotein signature 50 66 8.8E-33 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 YE1272 af2942ca48a9ef922da24c804a7cfaf2 254 PANTHER PTHR30035:SF3 1 252 1.4E-117 T 22-04-2016 YE1272 af2942ca48a9ef922da24c804a7cfaf2 254 PANTHER PTHR30035 1 252 1.4E-117 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 YE1272 af2942ca48a9ef922da24c804a7cfaf2 254 Pfam PF04333 MlaA lipoprotein 31 224 1.1E-65 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 YE0969 df1ead894274ed81f9c431a808c965f8 461 PANTHER PTHR10353:SF73 1 461 5.3E-276 T 22-04-2016 YE0969 df1ead894274ed81f9c431a808c965f8 461 Gene3D G3DSA:3.20.20.80 3 460 5.8E-144 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 YE0969 df1ead894274ed81f9c431a808c965f8 461 PRINTS PR00131 Glycosyl hydrolase family 1 signature 288 302 3.4E-14 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YE0969 df1ead894274ed81f9c431a808c965f8 461 PRINTS PR00131 Glycosyl hydrolase family 1 signature 429 441 3.4E-14 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YE0969 df1ead894274ed81f9c431a808c965f8 461 PRINTS PR00131 Glycosyl hydrolase family 1 signature 384 395 3.4E-14 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YE0969 df1ead894274ed81f9c431a808c965f8 461 PRINTS PR00131 Glycosyl hydrolase family 1 signature 360 368 3.4E-14 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YE0969 df1ead894274ed81f9c431a808c965f8 461 PRINTS PR00131 Glycosyl hydrolase family 1 signature 405 422 3.4E-14 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YE0969 df1ead894274ed81f9c431a808c965f8 461 SUPERFAMILY SSF51445 1 455 1.81E-158 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YE0969 df1ead894274ed81f9c431a808c965f8 461 PANTHER PTHR10353 1 461 5.3E-276 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YE0969 df1ead894274ed81f9c431a808c965f8 461 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 360 368 - T 22-04-2016 IPR018120 Glycoside hydrolase family 1, active site YE0969 df1ead894274ed81f9c431a808c965f8 461 Pfam PF00232 Glycosyl hydrolase family 1 2 460 1.2E-135 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YE3932 e721f03bb8c02a7773103505d0a57c0a 121 PANTHER PTHR38780 3 121 3.0E-55 T 22-04-2016 YE3932 e721f03bb8c02a7773103505d0a57c0a 121 Gene3D G3DSA:3.40.1260.10 3 121 2.1E-49 T 22-04-2016 IPR027396 DsrEFH-like YE3932 e721f03bb8c02a7773103505d0a57c0a 121 Hamap MF_00389 Protein TusC [tusC]. 3 121 36.29 T 22-04-2016 IPR017462 Sulphur relay, TusC/DsrF YE3932 e721f03bb8c02a7773103505d0a57c0a 121 PANTHER PTHR38780:SF1 3 121 3.0E-55 T 22-04-2016 YE3932 e721f03bb8c02a7773103505d0a57c0a 121 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 6 121 2.0E-47 T 22-04-2016 IPR017462 Sulphur relay, TusC/DsrF YE3932 e721f03bb8c02a7773103505d0a57c0a 121 SUPERFAMILY SSF75169 3 121 1.21E-37 T 22-04-2016 IPR027396 DsrEFH-like YE3932 e721f03bb8c02a7773103505d0a57c0a 121 Pfam PF02635 DsrE/DsrF-like family 6 121 1.2E-23 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein YE1310 ed2fad196c3a41f4ccc72d402b1b71e4 220 Pfam PF09335 SNARE associated Golgi protein 49 176 4.0E-26 T 22-04-2016 IPR032816 SNARE associated Golgi protein YE1310 ed2fad196c3a41f4ccc72d402b1b71e4 220 PANTHER PTHR30353 1 220 6.3E-104 T 22-04-2016 IPR032818 DedA family YE1310 ed2fad196c3a41f4ccc72d402b1b71e4 220 PANTHER PTHR30353:SF0 1 220 6.3E-104 T 22-04-2016 YE0212 c70bf5ef7d677c4fa74acf20802e6984 551 SUPERFAMILY SSF51905 10 323 3.99E-46 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE0212 c70bf5ef7d677c4fa74acf20802e6984 551 Pfam PF04324 BFD-like [2Fe-2S] binding domain 433 484 6.0E-10 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain YE0212 c70bf5ef7d677c4fa74acf20802e6984 551 Gene3D G3DSA:3.50.50.60 8 254 4.2E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE0212 c70bf5ef7d677c4fa74acf20802e6984 551 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 15 32 - T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 YE0212 c70bf5ef7d677c4fa74acf20802e6984 551 TIGRFAM TIGR03377 glycerol3P_GlpA: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit 11 540 6.5E-270 T 22-04-2016 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit GO:0004368|GO:0005886|GO:0010181|GO:0046174|GO:0050660|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|UniPathway: UPA00618 YE0212 c70bf5ef7d677c4fa74acf20802e6984 551 Pfam PF01266 FAD dependent oxidoreductase 11 359 1.9E-54 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 YE0212 c70bf5ef7d677c4fa74acf20802e6984 551 PANTHER PTHR11985:SF14 1 545 0.0 T 22-04-2016 YE0212 c70bf5ef7d677c4fa74acf20802e6984 551 PANTHER PTHR11985 1 545 0.0 T 22-04-2016 YE0212 c70bf5ef7d677c4fa74acf20802e6984 551 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 353 363 - T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 YE0212 c70bf5ef7d677c4fa74acf20802e6984 551 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 23 33 7.3E-22 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 YE0212 c70bf5ef7d677c4fa74acf20802e6984 551 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 348 360 7.3E-22 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 YE0212 c70bf5ef7d677c4fa74acf20802e6984 551 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 39 51 7.3E-22 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 YE0212 c70bf5ef7d677c4fa74acf20802e6984 551 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 312 318 7.3E-22 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 YE0212 c70bf5ef7d677c4fa74acf20802e6984 551 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 10 22 7.3E-22 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 YE1265 d986a2f342e50a54a8d1a8d9fbb31861 245 PANTHER PTHR30071 1 221 1.8E-92 T 22-04-2016 YE1265 d986a2f342e50a54a8d1a8d9fbb31861 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 4.3E-63 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 YE1265 d986a2f342e50a54a8d1a8d9fbb31861 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 4.3E-63 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 YE1265 d986a2f342e50a54a8d1a8d9fbb31861 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 4.3E-63 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 YE1265 d986a2f342e50a54a8d1a8d9fbb31861 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 201 225 4.3E-63 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 YE1265 d986a2f342e50a54a8d1a8d9fbb31861 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 4.3E-63 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 YE1265 d986a2f342e50a54a8d1a8d9fbb31861 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 4.3E-63 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 YE1265 d986a2f342e50a54a8d1a8d9fbb31861 245 Pfam PF01578 Cytochrome C assembly protein 20 184 1.3E-32 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 YE1265 d986a2f342e50a54a8d1a8d9fbb31861 245 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 225 3.6E-83 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 YE1833 37176add8cbd63eed6304b0fee375352 112 Pfam PF06942 GlpM protein 5 111 4.9E-50 T 22-04-2016 IPR009707 Membrane protein GlpM/YdgC YE1833 37176add8cbd63eed6304b0fee375352 112 ProDom PD028709 MEMBRANE INNER YDGC GLPM ALGINATE BIOSYNTHESIS TRANSMEMBRANE REQUIRED FOR UNCHARACTERIZED 14 111 5.0E-40 T 22-04-2016 IPR009707 Membrane protein GlpM/YdgC YE0524 b0ad7694c6466af97820d1a1ba3ccc7d 291 PIRSF PIRSF038992 31 289 2.2E-77 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 YE0524 b0ad7694c6466af97820d1a1ba3ccc7d 291 Pfam PF01791 DeoC/LacD family aldolase 52 258 8.7E-18 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 YE0524 b0ad7694c6466af97820d1a1ba3ccc7d 291 Gene3D G3DSA:3.20.20.70 34 284 2.0E-73 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YE0524 b0ad7694c6466af97820d1a1ba3ccc7d 291 PANTHER PTHR11627 69 201 8.2E-18 T 22-04-2016 YE0524 b0ad7694c6466af97820d1a1ba3ccc7d 291 SMART SM01133 51 259 2.4E-27 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 YE0524 b0ad7694c6466af97820d1a1ba3ccc7d 291 SUPERFAMILY SSF51569 35 274 8.42E-62 T 22-04-2016 YE0524 b0ad7694c6466af97820d1a1ba3ccc7d 291 PANTHER PTHR11627:SF18 69 201 8.2E-18 T 22-04-2016 YE3933 de3dc17bef6c36bf45c4ae7e9d44dcac 131 SUPERFAMILY SSF75169 1 131 1.43E-36 T 22-04-2016 IPR027396 DsrEFH-like YE3933 de3dc17bef6c36bf45c4ae7e9d44dcac 131 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 5 131 2.1E-55 T 22-04-2016 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 YE3933 de3dc17bef6c36bf45c4ae7e9d44dcac 131 PANTHER PTHR34874 4 131 2.5E-64 T 22-04-2016 YE3933 de3dc17bef6c36bf45c4ae7e9d44dcac 131 PANTHER PTHR34874:SF1 4 131 2.5E-64 T 22-04-2016 YE3933 de3dc17bef6c36bf45c4ae7e9d44dcac 131 Hamap MF_00390 Sulfurtransferase TusD [tusD]. 4 131 39.974 T 22-04-2016 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 YE3933 de3dc17bef6c36bf45c4ae7e9d44dcac 131 Pfam PF02635 DsrE/DsrF-like family 5 131 6.4E-28 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein YE3933 de3dc17bef6c36bf45c4ae7e9d44dcac 131 Gene3D G3DSA:3.40.1260.10 5 131 2.2E-29 T 22-04-2016 IPR027396 DsrEFH-like YE1721 51cc6615d1ee54495e0b00fc8b901836 208 Gene3D G3DSA:1.10.3890.10 2 208 9.0E-88 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 YE1721 51cc6615d1ee54495e0b00fc8b901836 208 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 206 36.815 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 YE1721 51cc6615d1ee54495e0b00fc8b901836 208 PANTHER PTHR38100 2 208 4.2E-104 T 22-04-2016 YE1721 51cc6615d1ee54495e0b00fc8b901836 208 SUPERFAMILY SSF101322 2 207 5.1E-82 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 YE1721 51cc6615d1ee54495e0b00fc8b901836 208 PANTHER PTHR38100:SF1 2 208 4.2E-104 T 22-04-2016 YE1721 51cc6615d1ee54495e0b00fc8b901836 208 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 197 2.0E-96 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 YE1721 51cc6615d1ee54495e0b00fc8b901836 208 Pfam PF04356 Protein of unknown function (DUF489) 7 198 1.8E-77 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 YE2331 6e952380a4285a54372071724d53a911 229 Pfam PF09669 Phage regulatory protein Rha (Phage_pRha) 15 96 1.2E-13 T 22-04-2016 IPR014054 Bacteriophage regulatory protein, Rha family YE2331 6e952380a4285a54372071724d53a911 229 TIGRFAM TIGR02681 phage_pRha: phage regulatory protein, Rha family 9 101 1.4E-16 T 22-04-2016 IPR014054 Bacteriophage regulatory protein, Rha family YE3851a 4b6d0685bfc40cc3430e26a11927b05c 72 TIGRFAM TIGR02975 phageshock_pspG: phage shock protein G 3 65 1.0E-28 T 22-04-2016 IPR014318 Phage shock protein, PspG YE3851a 4b6d0685bfc40cc3430e26a11927b05c 72 Pfam PF09583 Phage shock protein G (Phageshock_PspG) 1 64 7.0E-27 T 22-04-2016 IPR014318 Phage shock protein, PspG YE2717 78c27ceb0341a9279c9e3631d35ed4b7 275 TIGRFAM TIGR00715 precor6x_red: precorrin-6x reductase 9 249 2.1E-49 T 22-04-2016 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 YE2717 78c27ceb0341a9279c9e3631d35ed4b7 275 Pfam PF02571 Precorrin-6x reductase CbiJ/CobK 8 257 2.7E-72 T 22-04-2016 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 YE2717 78c27ceb0341a9279c9e3631d35ed4b7 275 PANTHER PTHR36925 4 264 6.1E-68 T 22-04-2016 YE2924 b2855255b15bc6a755b9dfe78868c9bd 250 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 8 17 - T 22-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 YE2924 b2855255b15bc6a755b9dfe78868c9bd 250 SMART SM00855 5 191 1.6E-27 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 YE2924 b2855255b15bc6a755b9dfe78868c9bd 250 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 5 248 1.2E-126 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 YE2924 b2855255b15bc6a755b9dfe78868c9bd 250 SUPERFAMILY SSF53254 4 247 2.36E-78 T 22-04-2016 IPR029033 Histidine phosphatase superfamily YE2924 b2855255b15bc6a755b9dfe78868c9bd 250 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 125 1.4E-29 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 YE2924 b2855255b15bc6a755b9dfe78868c9bd 250 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 143 221 1.4E-4 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 YE2924 b2855255b15bc6a755b9dfe78868c9bd 250 Gene3D G3DSA:3.40.50.1240 2 250 5.8E-97 T 22-04-2016 IPR029033 Histidine phosphatase superfamily YE2924 b2855255b15bc6a755b9dfe78868c9bd 250 PANTHER PTHR11931 1 250 2.1E-168 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 YE2924 b2855255b15bc6a755b9dfe78868c9bd 250 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 3 230 46.09 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 YE3160 9ab4c5807aac2dea3ce26371c801295d 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 4.1E-59 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 YE3160 9ab4c5807aac2dea3ce26371c801295d 156 Gene3D G3DSA:3.40.50.960 2 152 6.3E-63 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 YE3160 9ab4c5807aac2dea3ce26371c801295d 156 PANTHER PTHR21058 1 155 6.9E-77 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 YE3160 9ab4c5807aac2dea3ce26371c801295d 156 SUPERFAMILY SSF52121 3 154 4.45E-60 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 YE3160 9ab4c5807aac2dea3ce26371c801295d 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 31.977 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 YE3160 9ab4c5807aac2dea3ce26371c801295d 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 1.8E-54 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 YE1525 e3e36d061780cf638a8ad1a3b50575c5 1206 Gene3D G3DSA:3.40.50.300 798 1104 3.6E-98 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1525 e3e36d061780cf638a8ad1a3b50575c5 1206 SUPERFAMILY SSF46785 1139 1204 2.04E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1525 e3e36d061780cf638a8ad1a3b50575c5 1206 PANTHER PTHR22683:SF41 1 308 0.0 T 22-04-2016 YE1525 e3e36d061780cf638a8ad1a3b50575c5 1206 PANTHER PTHR22683:SF41 416 1203 0.0 T 22-04-2016 YE1525 e3e36d061780cf638a8ad1a3b50575c5 1206 SUPERFAMILY SSF52540 798 1110 6.11E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1525 e3e36d061780cf638a8ad1a3b50575c5 1206 PANTHER PTHR22683 1 308 0.0 T 22-04-2016 YE1525 e3e36d061780cf638a8ad1a3b50575c5 1206 Pfam PF09397 Ftsk gamma domain 1141 1201 8.7E-27 T 22-04-2016 IPR018541 FtsK gamma domain YE1525 e3e36d061780cf638a8ad1a3b50575c5 1206 Pfam PF01580 FtsK/SpoIIIE family 824 1037 9.6E-73 T 22-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 YE1525 e3e36d061780cf638a8ad1a3b50575c5 1206 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 20 191 2.8E-44 T 22-04-2016 IPR025199 DNA translocase FtsK, 4TM region YE1525 e3e36d061780cf638a8ad1a3b50575c5 1206 SMART SM00843 1139 1204 1.1E-40 T 22-04-2016 IPR018541 FtsK gamma domain YE1525 e3e36d061780cf638a8ad1a3b50575c5 1206 PANTHER PTHR22683 416 1203 0.0 T 22-04-2016 YE2203 09b0ef2ed4307fd3211f0b0a24e9a3c3 348 PANTHER PTHR33209 2 348 4.2E-220 T 22-04-2016 YE2203 09b0ef2ed4307fd3211f0b0a24e9a3c3 348 Pfam PF08496 Peptidase family S49 N-terminal 2 157 1.2E-58 T 22-04-2016 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 YE2203 09b0ef2ed4307fd3211f0b0a24e9a3c3 348 Pfam PF01343 Peptidase family S49 161 304 4.9E-45 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 YE2203 09b0ef2ed4307fd3211f0b0a24e9a3c3 348 PANTHER PTHR33209:SF2 2 348 4.2E-220 T 22-04-2016 YE2203 09b0ef2ed4307fd3211f0b0a24e9a3c3 348 Gene3D G3DSA:3.90.226.10 270 300 2.3E-34 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YE2203 09b0ef2ed4307fd3211f0b0a24e9a3c3 348 Gene3D G3DSA:3.90.226.10 101 204 2.3E-34 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YE2203 09b0ef2ed4307fd3211f0b0a24e9a3c3 348 SUPERFAMILY SSF52096 96 208 1.76E-30 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YE2203 09b0ef2ed4307fd3211f0b0a24e9a3c3 348 SUPERFAMILY SSF52096 239 298 1.76E-30 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YE0187 6af6dbaf7120bc3c9d30e3de84e3d3a7 313 Gene3D G3DSA:3.30.160.40 221 306 1.6E-30 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YE0187 6af6dbaf7120bc3c9d30e3de84e3d3a7 313 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 226 295 6.9E-23 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YE0187 6af6dbaf7120bc3c9d30e3de84e3d3a7 313 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 6 212 3.1E-77 T 22-04-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YE0187 6af6dbaf7120bc3c9d30e3de84e3d3a7 313 PIRSF PIRSF001438 1 311 3.5E-121 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YE0187 6af6dbaf7120bc3c9d30e3de84e3d3a7 313 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 6 297 2.0E-112 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YE0187 6af6dbaf7120bc3c9d30e3de84e3d3a7 313 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 231 247 - T 22-04-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YE0187 6af6dbaf7120bc3c9d30e3de84e3d3a7 313 Gene3D G3DSA:3.40.190.10 3 110 2.0E-47 T 22-04-2016 YE0187 6af6dbaf7120bc3c9d30e3de84e3d3a7 313 SUPERFAMILY SSF54782 220 309 5.1E-30 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YE0187 6af6dbaf7120bc3c9d30e3de84e3d3a7 313 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 5 297 39.559 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YE0187 6af6dbaf7120bc3c9d30e3de84e3d3a7 313 PANTHER PTHR11557 1 310 1.0E-169 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YE0187 6af6dbaf7120bc3c9d30e3de84e3d3a7 313 Gene3D G3DSA:3.40.190.10 111 199 9.4E-39 T 22-04-2016 YE0187 6af6dbaf7120bc3c9d30e3de84e3d3a7 313 PRINTS PR00151 Porphobilinogen deaminase signature 76 95 1.4E-49 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YE0187 6af6dbaf7120bc3c9d30e3de84e3d3a7 313 PRINTS PR00151 Porphobilinogen deaminase signature 143 160 1.4E-49 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YE0187 6af6dbaf7120bc3c9d30e3de84e3d3a7 313 PRINTS PR00151 Porphobilinogen deaminase signature 124 141 1.4E-49 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YE0187 6af6dbaf7120bc3c9d30e3de84e3d3a7 313 PRINTS PR00151 Porphobilinogen deaminase signature 230 247 1.4E-49 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YE0187 6af6dbaf7120bc3c9d30e3de84e3d3a7 313 PRINTS PR00151 Porphobilinogen deaminase signature 45 65 1.4E-49 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YE0187 6af6dbaf7120bc3c9d30e3de84e3d3a7 313 SUPERFAMILY SSF53850 5 219 5.52E-85 T 22-04-2016 YE2018 785696dbce7f5c3c0c3096b44a37d652 309 Pfam PF05472 DNA replication terminus site-binding protein (Ter protein) 9 306 8.0E-140 T 22-04-2016 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 YE2018 785696dbce7f5c3c0c3096b44a37d652 309 SUPERFAMILY SSF56596 5 307 5.75E-121 T 22-04-2016 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 YE2018 785696dbce7f5c3c0c3096b44a37d652 309 Gene3D G3DSA:3.30.54.10 295 308 2.7E-35 T 22-04-2016 YE2018 785696dbce7f5c3c0c3096b44a37d652 309 Gene3D G3DSA:3.30.54.10 174 235 2.7E-35 T 22-04-2016 YE2018 785696dbce7f5c3c0c3096b44a37d652 309 Gene3D G3DSA:3.50.14.10 7 173 1.9E-94 T 22-04-2016 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 YE2018 785696dbce7f5c3c0c3096b44a37d652 309 Gene3D G3DSA:3.50.14.10 236 281 1.9E-94 T 22-04-2016 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 YE2018 785696dbce7f5c3c0c3096b44a37d652 309 TIGRFAM TIGR02648 rep_term_tus: DNA replication terminus site-binding protein 10 308 4.4E-163 T 22-04-2016 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 YE2018 785696dbce7f5c3c0c3096b44a37d652 309 Hamap MF_00483 DNA replication terminus site-binding protein [tus]. 1 309 45.047 T 22-04-2016 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 YE1536 18fb33e346b0cfe7311bdd98c8a29c85 230 Pfam PF04239 Protein of unknown function (DUF421) 104 168 6.5E-16 T 22-04-2016 IPR007353 Protein of unknown function DUF421 YE1536 18fb33e346b0cfe7311bdd98c8a29c85 230 PANTHER PTHR34582 4 178 9.9E-63 T 22-04-2016 YE1536 18fb33e346b0cfe7311bdd98c8a29c85 230 PANTHER PTHR34582:SF6 4 178 9.9E-63 T 22-04-2016 YE1536 18fb33e346b0cfe7311bdd98c8a29c85 230 Gene3D G3DSA:3.30.240.20 95 167 9.8E-24 T 22-04-2016 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain YE2206 ff738d7f37f2efc2f0e552c4ef013e84 309 PANTHER PTHR21600:SF2 1 303 4.8E-106 T 22-04-2016 YE2206 ff738d7f37f2efc2f0e552c4ef013e84 309 Pfam PF01479 S4 domain 1 36 1.8E-8 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YE2206 ff738d7f37f2efc2f0e552c4ef013e84 309 PANTHER PTHR21600 1 303 4.8E-106 T 22-04-2016 YE2206 ff738d7f37f2efc2f0e552c4ef013e84 309 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 65 225 7.8E-64 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 YE2206 ff738d7f37f2efc2f0e552c4ef013e84 309 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 YE2206 ff738d7f37f2efc2f0e552c4ef013e84 309 Pfam PF00849 RNA pseudouridylate synthase 61 191 3.7E-17 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 YE2206 ff738d7f37f2efc2f0e552c4ef013e84 309 SUPERFAMILY SSF55120 61 225 3.52E-45 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 YE2206 ff738d7f37f2efc2f0e552c4ef013e84 309 SUPERFAMILY SSF55174 1 90 1.15E-10 T 22-04-2016 YE2206 ff738d7f37f2efc2f0e552c4ef013e84 309 Gene3D G3DSA:3.10.290.10 1 54 1.3E-10 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YE2652 9f010670a331e75b6089a1422c31659d 97 TIGRFAM TIGR01608 citD: citrate lyase acyl carrier protein 1 94 1.5E-29 T 22-04-2016 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 YE2652 9f010670a331e75b6089a1422c31659d 97 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 5 86 5.3E-28 T 22-04-2016 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein YE2652 9f010670a331e75b6089a1422c31659d 97 Hamap MF_00805 Citrate lyase acyl carrier protein [citD]. 1 97 25.529 T 22-04-2016 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 YE2652 9f010670a331e75b6089a1422c31659d 97 ProDom PD015389 LYASE CITRATE ACYL CARRIER GAMMA CHAIN CITD PRECURSOR SIGNAL DIRECT 1 80 4.0E-26 T 22-04-2016 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 YE2652 9f010670a331e75b6089a1422c31659d 97 PIRSF PIRSF002736 1 97 2.5E-36 T 22-04-2016 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 YE1116 d95cb45fc00b792749485352719e4d7a 1134 Gene3D G3DSA:3.30.450.20 317 434 1.0E-23 T 22-04-2016 YE1116 d95cb45fc00b792749485352719e4d7a 1134 Gene3D G3DSA:3.30.450.20 571 692 5.4E-18 T 22-04-2016 YE1116 d95cb45fc00b792749485352719e4d7a 1134 SMART SM00052 879 1124 4.7E-9 T 22-04-2016 IPR001633 EAL domain YE1116 d95cb45fc00b792749485352719e4d7a 1134 Pfam PF05231 MASE1 40 298 3.9E-18 T 22-04-2016 IPR007895 MASE1 YE1116 d95cb45fc00b792749485352719e4d7a 1134 SUPERFAMILY SSF55785 560 690 4.03E-17 T 22-04-2016 IPR000014 PAS domain YE1116 d95cb45fc00b792749485352719e4d7a 1134 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 573 699 5.3E-11 T 22-04-2016 IPR000014 PAS domain YE1116 d95cb45fc00b792749485352719e4d7a 1134 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 319 441 5.1E-28 T 22-04-2016 IPR000014 PAS domain YE1116 d95cb45fc00b792749485352719e4d7a 1134 PANTHER PTHR24423 1109 1116 6.3E-93 T 22-04-2016 YE1116 d95cb45fc00b792749485352719e4d7a 1134 Pfam PF00990 Diguanylate cyclase, GGDEF domain 706 862 1.2E-40 T 22-04-2016 IPR000160 GGDEF domain YE1116 d95cb45fc00b792749485352719e4d7a 1134 Pfam PF08447 PAS fold 472 557 3.5E-15 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 YE1116 d95cb45fc00b792749485352719e4d7a 1134 Pfam PF08447 PAS fold 346 429 2.9E-11 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 YE1116 d95cb45fc00b792749485352719e4d7a 1134 SMART SM00267 695 867 1.0E-55 T 22-04-2016 IPR000160 GGDEF domain YE1116 d95cb45fc00b792749485352719e4d7a 1134 PANTHER PTHR24423:SF477 1 581 6.3E-93 T 22-04-2016 YE1116 d95cb45fc00b792749485352719e4d7a 1134 PANTHER PTHR24423:SF477 1109 1116 6.3E-93 T 22-04-2016 YE1116 d95cb45fc00b792749485352719e4d7a 1134 SUPERFAMILY SSF141868 887 1126 7.85E-27 T 22-04-2016 IPR001633 EAL domain YE1116 d95cb45fc00b792749485352719e4d7a 1134 SMART SM00086 395 437 5.0E-8 T 22-04-2016 IPR001610 PAC motif YE1116 d95cb45fc00b792749485352719e4d7a 1134 SMART SM00086 522 564 0.0029 T 22-04-2016 IPR001610 PAC motif YE1116 d95cb45fc00b792749485352719e4d7a 1134 SMART SM00086 653 695 0.16 T 22-04-2016 IPR001610 PAC motif YE1116 d95cb45fc00b792749485352719e4d7a 1134 Pfam PF08448 PAS fold 582 696 1.1E-7 T 22-04-2016 IPR013656 PAS fold-4 YE1116 d95cb45fc00b792749485352719e4d7a 1134 SMART SM00091 576 645 2.0E-5 T 22-04-2016 IPR000014 PAS domain YE1116 d95cb45fc00b792749485352719e4d7a 1134 SMART SM00091 322 388 4.7E-10 T 22-04-2016 IPR000014 PAS domain YE1116 d95cb45fc00b792749485352719e4d7a 1134 SMART SM00091 449 516 0.074 T 22-04-2016 IPR000014 PAS domain YE1116 d95cb45fc00b792749485352719e4d7a 1134 Gene3D G3DSA:3.20.20.450 887 1126 3.2E-29 T 22-04-2016 IPR001633 EAL domain YE1116 d95cb45fc00b792749485352719e4d7a 1134 Gene3D G3DSA:3.30.450.20 449 570 2.5E-18 T 22-04-2016 YE1116 d95cb45fc00b792749485352719e4d7a 1134 SUPERFAMILY SSF55785 315 434 2.26E-22 T 22-04-2016 IPR000014 PAS domain YE1116 d95cb45fc00b792749485352719e4d7a 1134 Gene3D G3DSA:3.30.70.270 708 872 1.5E-49 T 22-04-2016 YE1116 d95cb45fc00b792749485352719e4d7a 1134 SUPERFAMILY SSF55073 711 869 1.26E-44 T 22-04-2016 IPR029787 Nucleotide cyclase YE1116 d95cb45fc00b792749485352719e4d7a 1134 PANTHER PTHR24423 1 581 6.3E-93 T 22-04-2016 YE1116 d95cb45fc00b792749485352719e4d7a 1134 Pfam PF00563 EAL domain 886 1118 1.1E-28 T 22-04-2016 IPR001633 EAL domain YE1116 d95cb45fc00b792749485352719e4d7a 1134 SUPERFAMILY SSF55785 458 565 2.26E-17 T 22-04-2016 IPR000014 PAS domain YE1116 d95cb45fc00b792749485352719e4d7a 1134 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 703 866 4.0E-39 T 22-04-2016 IPR000160 GGDEF domain YE1869 ee6631a4bdf02d04de4638166c40d3b9 293 Gene3D G3DSA:3.30.2010.10 69 156 3.7E-33 T 22-04-2016 YE1869 ee6631a4bdf02d04de4638166c40d3b9 293 Pfam PF01435 Peptidase family M48 74 288 1.3E-39 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 YE1869 ee6631a4bdf02d04de4638166c40d3b9 293 PANTHER PTHR10120 1 290 1.2E-114 T 22-04-2016 YE1869 ee6631a4bdf02d04de4638166c40d3b9 293 Hamap MF_00188 Protease HtpX [htpX]. 1 289 26.274 T 22-04-2016 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 YE1869 ee6631a4bdf02d04de4638166c40d3b9 293 PANTHER PTHR10120:SF19 1 290 1.2E-114 T 22-04-2016 YE0249 e9eea67d09053bf655316b5317e08e9b 758 SUPERFAMILY SSF51726 5 392 3.79E-113 T 22-04-2016 YE0249 e9eea67d09053bf655316b5317e08e9b 758 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 3 756 37.629 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 YE0249 e9eea67d09053bf655316b5317e08e9b 758 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 429 751 5.3E-160 T 22-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 YE0249 e9eea67d09053bf655316b5317e08e9b 758 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 313 1.1E-126 T 22-04-2016 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 YE0249 e9eea67d09053bf655316b5317e08e9b 758 Gene3D G3DSA:3.20.20.210 390 756 1.2E-135 T 22-04-2016 YE0249 e9eea67d09053bf655316b5317e08e9b 758 PANTHER PTHR30519:SF0 1 756 0.0 T 22-04-2016 YE0249 e9eea67d09053bf655316b5317e08e9b 758 SUPERFAMILY SSF51726 394 756 1.7E-119 T 22-04-2016 YE0249 e9eea67d09053bf655316b5317e08e9b 758 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 8 756 0.0 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 YE0249 e9eea67d09053bf655316b5317e08e9b 758 Gene3D G3DSA:3.20.20.210 5 387 3.2E-151 T 22-04-2016 YE0249 e9eea67d09053bf655316b5317e08e9b 758 PIRSF PIRSF000382 2 758 0.0 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 YE0249 e9eea67d09053bf655316b5317e08e9b 758 PANTHER PTHR30519 1 756 0.0 T 22-04-2016 YE1159 a100ef40dc994112c6f8115b5fe33f47 83 PANTHER PTHR33713 1 71 4.0E-28 T 22-04-2016 YE1159 a100ef40dc994112c6f8115b5fe33f47 83 PANTHER PTHR33713:SF1 1 71 4.0E-28 T 22-04-2016 YE1159 a100ef40dc994112c6f8115b5fe33f47 83 SUPERFAMILY SSF143120 11 72 2.62E-6 T 22-04-2016 YE1159 a100ef40dc994112c6f8115b5fe33f47 83 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 10 72 4.5E-7 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM YE3640 7b10d91d6ec7ca874e665f5779bfd02f 274 PANTHER PTHR35007 14 273 9.5E-53 T 22-04-2016 YE3640 7b10d91d6ec7ca874e665f5779bfd02f 274 Pfam PF00482 Type II secretion system (T2SS), protein F 135 263 1.2E-11 T 22-04-2016 IPR018076 Type II secretion system F domain YE3640 7b10d91d6ec7ca874e665f5779bfd02f 274 PANTHER PTHR35007:SF2 14 273 9.5E-53 T 22-04-2016 YE3570a 001976d13811974a75b463649720d99d 199 Gene3D G3DSA:3.10.610.10 39 139 9.8E-22 T 22-04-2016 YE3570a 001976d13811974a75b463649720d99d 199 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 7 193 1.0E-49 T 22-04-2016 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 YE3570a 001976d13811974a75b463649720d99d 199 PANTHER PTHR39583:SF1 1 193 6.6E-38 T 22-04-2016 YE3570a 001976d13811974a75b463649720d99d 199 SUPERFAMILY SSF54523 9 47 8.47E-5 T 22-04-2016 YE3570a 001976d13811974a75b463649720d99d 199 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site YE3570a 001976d13811974a75b463649720d99d 199 PANTHER PTHR39583 1 193 6.6E-38 T 22-04-2016 YE3570a 001976d13811974a75b463649720d99d 199 Pfam PF13633 Prokaryotic N-terminal methylation site 6 32 7.0E-9 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site YE3570a 001976d13811974a75b463649720d99d 199 Gene3D G3DSA:2.10.70.20 148 194 1.6E-19 T 22-04-2016 YE3570a 001976d13811974a75b463649720d99d 199 Pfam PF11612 Type II secretion system (T2SS), protein J 59 191 6.0E-28 T 22-04-2016 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 YE3570a 001976d13811974a75b463649720d99d 199 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 29 1.2E-9 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site YE3570a 001976d13811974a75b463649720d99d 199 SUPERFAMILY SSF54523 40 193 8.37E-41 T 22-04-2016 YE2408 3439d314575d15021a25fc454f7b6846 555 PANTHER PTHR34597:SF2 1 555 7.0E-170 T 22-04-2016 YE2408 3439d314575d15021a25fc454f7b6846 555 Gene3D G3DSA:2.40.160.50 176 555 3.1E-77 T 22-04-2016 YE2408 3439d314575d15021a25fc454f7b6846 555 Pfam PF08479 POTRA domain, ShlB-type 74 147 3.3E-16 T 22-04-2016 IPR013686 Polypeptide-transport-associated, ShlB-type YE2408 3439d314575d15021a25fc454f7b6846 555 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 155 555 9.3E-109 T 22-04-2016 IPR005565 Haemolysin activator HlyB YE2408 3439d314575d15021a25fc454f7b6846 555 PIRSF PIRSF029745 2 555 1.4E-106 T 22-04-2016 IPR027282 Two partner secretion pathway transporter GO:0015031 YE2408 3439d314575d15021a25fc454f7b6846 555 PANTHER PTHR34597 1 555 7.0E-170 T 22-04-2016 YE2408 3439d314575d15021a25fc454f7b6846 555 Gene3D G3DSA:3.10.20.310 70 147 2.6E-13 T 22-04-2016 YE4050 50f2b09bcd37d4dff9ea264abaa35d1d 148 Pfam PF00582 Universal stress protein family 3 138 2.9E-20 T 22-04-2016 IPR006016 UspA GO:0006950 YE4050 50f2b09bcd37d4dff9ea264abaa35d1d 148 PIRSF PIRSF006276 1 141 6.4E-54 T 22-04-2016 IPR006015 Universal stress protein A YE4050 50f2b09bcd37d4dff9ea264abaa35d1d 148 Gene3D G3DSA:3.40.50.620 3 139 9.4E-31 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YE4050 50f2b09bcd37d4dff9ea264abaa35d1d 148 SUPERFAMILY SSF52402 3 139 4.6E-31 T 22-04-2016 YE1484 92bb9cb4c6593679ef1beb38be6ff620 369 Gene3D G3DSA:3.40.190.10 150 317 8.3E-75 T 22-04-2016 YE1484 92bb9cb4c6593679ef1beb38be6ff620 369 Pfam PF13416 Bacterial extracellular solute-binding protein 46 334 1.5E-32 T 22-04-2016 YE1484 92bb9cb4c6593679ef1beb38be6ff620 369 SUPERFAMILY SSF53850 28 368 6.27E-104 T 22-04-2016 YE1484 92bb9cb4c6593679ef1beb38be6ff620 369 PANTHER PTHR30222:SF11 18 369 1.9E-173 T 22-04-2016 YE1484 92bb9cb4c6593679ef1beb38be6ff620 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 313 339 1.2E-75 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 YE1484 92bb9cb4c6593679ef1beb38be6ff620 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 34 50 1.2E-75 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 YE1484 92bb9cb4c6593679ef1beb38be6ff620 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 218 237 1.2E-75 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 YE1484 92bb9cb4c6593679ef1beb38be6ff620 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 268 287 1.2E-75 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 YE1484 92bb9cb4c6593679ef1beb38be6ff620 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 180 199 1.2E-75 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 YE1484 92bb9cb4c6593679ef1beb38be6ff620 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 93 106 1.2E-75 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 YE1484 92bb9cb4c6593679ef1beb38be6ff620 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 77 91 1.2E-75 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 YE1484 92bb9cb4c6593679ef1beb38be6ff620 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 157 171 1.2E-75 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 YE1484 92bb9cb4c6593679ef1beb38be6ff620 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 126 142 1.2E-75 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 YE1484 92bb9cb4c6593679ef1beb38be6ff620 369 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 50 71 1.2E-75 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 YE1484 92bb9cb4c6593679ef1beb38be6ff620 369 PIRSF PIRSF019574 1 369 6.5E-142 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 YE1484 92bb9cb4c6593679ef1beb38be6ff620 369 PANTHER PTHR30222 18 369 1.9E-173 T 22-04-2016 YE1484 92bb9cb4c6593679ef1beb38be6ff620 369 Gene3D G3DSA:3.40.190.10 43 149 1.9E-11 T 22-04-2016 YE3677 9ff1b926e4f3250ee1115908e4e9a2e9 414 SMART SM00471 224 359 0.0048 T 22-04-2016 IPR003607 HD/PDEase domain YE3677 9ff1b926e4f3250ee1115908e4e9a2e9 414 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 211 2.0E-14 T 22-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain YE3677 9ff1b926e4f3250ee1115908e4e9a2e9 414 Pfam PF01743 Poly A polymerase head domain 3 122 1.3E-17 T 22-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 YE3677 9ff1b926e4f3250ee1115908e4e9a2e9 414 PIRSF PIRSF000813 1 408 5.4E-201 T 22-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 YE3677 9ff1b926e4f3250ee1115908e4e9a2e9 414 Gene3D G3DSA:3.30.460.10 1 121 3.3E-29 T 22-04-2016 YE3677 9ff1b926e4f3250ee1115908e4e9a2e9 414 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 407 53.201 T 22-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 YE3677 9ff1b926e4f3250ee1115908e4e9a2e9 414 SUPERFAMILY SSF81891 120 406 3.27E-55 T 22-04-2016 YE3677 9ff1b926e4f3250ee1115908e4e9a2e9 414 Pfam PF01966 HD domain 229 327 1.3E-12 T 22-04-2016 IPR006674 HD domain YE3677 9ff1b926e4f3250ee1115908e4e9a2e9 414 Gene3D G3DSA:1.10.3090.10 122 360 2.5E-55 T 22-04-2016 YE3677 9ff1b926e4f3250ee1115908e4e9a2e9 414 SUPERFAMILY SSF81301 1 119 6.54E-30 T 22-04-2016 YE3677 9ff1b926e4f3250ee1115908e4e9a2e9 414 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 46.577 T 22-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 YE3677 9ff1b926e4f3250ee1115908e4e9a2e9 414 PANTHER PTHR13734 4 380 5.1E-79 T 22-04-2016 YE3945 2aa619cb1396c09462a03647969bdce9 282 Gene3D G3DSA:3.60.130.10 3 282 8.0E-98 T 22-04-2016 YE3945 2aa619cb1396c09462a03647969bdce9 282 PANTHER PTHR30468:SF2 1 282 4.4E-102 T 22-04-2016 YE3945 2aa619cb1396c09462a03647969bdce9 282 SUPERFAMILY SSF51197 7 281 4.12E-96 T 22-04-2016 YE3945 2aa619cb1396c09462a03647969bdce9 282 PANTHER PTHR30468 1 282 4.4E-102 T 22-04-2016 YE3945 2aa619cb1396c09462a03647969bdce9 282 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 7 272 2.9E-66 T 22-04-2016 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: REACT_13 YE3953 41f83b053ac0d716f2b224a1decb55a3 289 ProSitePatterns PS00567 Phosphoribulokinase signature. 164 177 - T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 YE3953 41f83b053ac0d716f2b224a1decb55a3 289 PRINTS PR00478 Phosphoribulokinase family signature 182 205 6.0E-29 T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 YE3953 41f83b053ac0d716f2b224a1decb55a3 289 PRINTS PR00478 Phosphoribulokinase family signature 164 181 6.0E-29 T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 YE3953 41f83b053ac0d716f2b224a1decb55a3 289 PRINTS PR00478 Phosphoribulokinase family signature 126 144 6.0E-29 T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 YE3953 41f83b053ac0d716f2b224a1decb55a3 289 PRINTS PR00478 Phosphoribulokinase family signature 12 29 6.0E-29 T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 YE3953 41f83b053ac0d716f2b224a1decb55a3 289 PANTHER PTHR10285:SF72 1 275 3.3E-155 T 22-04-2016 YE3953 41f83b053ac0d716f2b224a1decb55a3 289 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 7.4E-74 T 22-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 YE3953 41f83b053ac0d716f2b224a1decb55a3 289 SUPERFAMILY SSF52540 4 286 2.34E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3953 41f83b053ac0d716f2b224a1decb55a3 289 Gene3D G3DSA:3.40.50.300 1 288 2.4E-128 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3953 41f83b053ac0d716f2b224a1decb55a3 289 PANTHER PTHR10285 1 275 3.3E-155 T 22-04-2016 YE3832 71d3a0b8cb5bf3e81e988cd15de6c9ac 512 SUPERFAMILY SSF53474 203 353 3.31E-9 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE3832 71d3a0b8cb5bf3e81e988cd15de6c9ac 512 PANTHER PTHR31497:SF0 34 501 1.0E-156 T 22-04-2016 YE3832 71d3a0b8cb5bf3e81e988cd15de6c9ac 512 Gene3D G3DSA:3.40.50.1820 131 354 6.9E-12 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE3832 71d3a0b8cb5bf3e81e988cd15de6c9ac 512 PANTHER PTHR31497 34 501 1.0E-156 T 22-04-2016 YE3832 71d3a0b8cb5bf3e81e988cd15de6c9ac 512 Pfam PF10142 PhoPQ-activated pathogenicity-related protein 40 414 6.2E-132 T 22-04-2016 IPR009199 PhoPQ-activated pathogenicity-related protein, PqaA type YE3832 71d3a0b8cb5bf3e81e988cd15de6c9ac 512 PIRSF PIRSF014728 3 491 4.1E-191 T 22-04-2016 IPR009199 PhoPQ-activated pathogenicity-related protein, PqaA type YE2703 2606f58ae65451409b74803ceb331afd 556 PANTHER PTHR30128 424 549 4.4E-29 T 22-04-2016 YE2703 2606f58ae65451409b74803ceb331afd 556 Gene3D G3DSA:3.30.1330.60 442 548 4.0E-27 T 22-04-2016 IPR006665 OmpA-like domain YE2703 2606f58ae65451409b74803ceb331afd 556 SUPERFAMILY SSF103088 438 549 4.19E-26 T 22-04-2016 IPR006665 OmpA-like domain YE2703 2606f58ae65451409b74803ceb331afd 556 PRINTS PR01021 OMPA domain signature 443 465 1.9E-7 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YE2703 2606f58ae65451409b74803ceb331afd 556 PRINTS PR01021 OMPA domain signature 490 506 1.9E-7 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YE2703 2606f58ae65451409b74803ceb331afd 556 PRINTS PR01021 OMPA domain signature 475 490 1.9E-7 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YE2703 2606f58ae65451409b74803ceb331afd 556 Pfam PF00691 OmpA family 442 540 4.0E-17 T 22-04-2016 IPR006665 OmpA-like domain YE0655 392d34c3051e70219cdd90e8187254ea 318 Gene3D G3DSA:3.40.190.10 108 190 1.3E-20 T 22-04-2016 YE0655 392d34c3051e70219cdd90e8187254ea 318 Gene3D G3DSA:3.40.190.10 290 314 1.3E-20 T 22-04-2016 YE0655 392d34c3051e70219cdd90e8187254ea 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 27 86 3.0E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE0655 392d34c3051e70219cdd90e8187254ea 318 Gene3D G3DSA:1.10.10.10 21 103 1.0E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0655 392d34c3051e70219cdd90e8187254ea 318 PANTHER PTHR30118 16 311 6.5E-146 T 22-04-2016 YE0655 392d34c3051e70219cdd90e8187254ea 318 SUPERFAMILY SSF46785 22 101 7.78E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0655 392d34c3051e70219cdd90e8187254ea 318 Pfam PF03466 LysR substrate binding domain 118 312 6.1E-20 T 22-04-2016 IPR005119 LysR, substrate-binding YE0655 392d34c3051e70219cdd90e8187254ea 318 SUPERFAMILY SSF53850 108 313 3.62E-42 T 22-04-2016 YE0655 392d34c3051e70219cdd90e8187254ea 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 63 74 4.86E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE0655 392d34c3051e70219cdd90e8187254ea 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 53 63 4.86E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE0655 392d34c3051e70219cdd90e8187254ea 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 4.86E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE0655 392d34c3051e70219cdd90e8187254ea 318 PANTHER PTHR30118:SF6 16 311 6.5E-146 T 22-04-2016 YE0655 392d34c3051e70219cdd90e8187254ea 318 Gene3D G3DSA:3.40.190.10 191 284 2.3E-16 T 22-04-2016 YE3341 f38bd24a840bae16f15968d3142989e4 277 PANTHER PTHR30487:SF0 1 34 3.8E-71 T 22-04-2016 YE3341 f38bd24a840bae16f15968d3142989e4 277 PANTHER PTHR30487:SF0 53 273 3.8E-71 T 22-04-2016 YE3341 f38bd24a840bae16f15968d3142989e4 277 Pfam PF01478 Type IV leader peptidase family 131 237 1.0E-19 T 22-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 YE3341 f38bd24a840bae16f15968d3142989e4 277 PANTHER PTHR30487 1 34 3.8E-71 T 22-04-2016 YE3341 f38bd24a840bae16f15968d3142989e4 277 PANTHER PTHR30487 53 273 3.8E-71 T 22-04-2016 YE3341 f38bd24a840bae16f15968d3142989e4 277 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 196 206 6.6E-19 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- YE3341 f38bd24a840bae16f15968d3142989e4 277 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 207 218 6.6E-19 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- YE3341 f38bd24a840bae16f15968d3142989e4 277 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 139 156 6.6E-19 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- YE3341 f38bd24a840bae16f15968d3142989e4 277 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 219 234 6.6E-19 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- YE3341 f38bd24a840bae16f15968d3142989e4 277 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 16 118 1.8E-21 T 22-04-2016 IPR010627 Peptidase A24A, N-terminal KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- YE0321 71176d95fbfcf168a20795e308de2533 83 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 74 1.1E-22 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM YE0321 71176d95fbfcf168a20795e308de2533 83 SUPERFAMILY SSF143120 1 80 2.49E-25 T 22-04-2016 YE0321 71176d95fbfcf168a20795e308de2533 83 PANTHER PTHR33713:SF6 1 82 1.6E-25 T 22-04-2016 YE0321 71176d95fbfcf168a20795e308de2533 83 Gene3D G3DSA:3.40.1620.10 1 51 6.6E-10 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM YE0321 71176d95fbfcf168a20795e308de2533 83 PANTHER PTHR33713 1 82 1.6E-25 T 22-04-2016 YE0321 71176d95fbfcf168a20795e308de2533 83 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 3 56 1.6E-11 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM YE3586 99b25954de426205ea7918b222013fd5 317 PANTHER PTHR30532:SF4 1 317 1.9E-138 T 22-04-2016 YE3586 99b25954de426205ea7918b222013fd5 317 Gene3D G3DSA:3.40.50.1980 160 310 5.3E-35 T 22-04-2016 YE3586 99b25954de426205ea7918b222013fd5 317 SUPERFAMILY SSF53807 32 296 5.49E-66 T 22-04-2016 YE3586 99b25954de426205ea7918b222013fd5 317 Pfam PF01497 Periplasmic binding protein 52 287 4.4E-33 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 YE3586 99b25954de426205ea7918b222013fd5 317 PANTHER PTHR30532 1 317 1.9E-138 T 22-04-2016 YE3586 99b25954de426205ea7918b222013fd5 317 Gene3D G3DSA:3.40.50.1980 33 159 3.1E-30 T 22-04-2016 YE2540 3499fa510f2e96b6c437001b9637967f 443 SUPERFAMILY SSF52540 97 367 1.19E-91 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2540 3499fa510f2e96b6c437001b9637967f 443 SMART SM00382 162 345 5.1E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain YE2540 3499fa510f2e96b6c437001b9637967f 443 PANTHER PTHR15184:SF9 1 441 7.0E-236 T 22-04-2016 IPR032463 ATPase, type III secretion system, FliI GO:0016887|GO:0030257|GO:0044780 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YE2540 3499fa510f2e96b6c437001b9637967f 443 Gene3D G3DSA:3.40.50.300 127 409 1.7E-89 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2540 3499fa510f2e96b6c437001b9637967f 443 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 18 439 2.4E-197 T 22-04-2016 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YE2540 3499fa510f2e96b6c437001b9637967f 443 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 3 441 1.9E-190 T 22-04-2016 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YE2540 3499fa510f2e96b6c437001b9637967f 443 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 150 361 9.8E-71 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YE2540 3499fa510f2e96b6c437001b9637967f 443 PANTHER PTHR15184 1 441 7.0E-236 T 22-04-2016 YE2540 3499fa510f2e96b6c437001b9637967f 443 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 352 361 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YE2960 95913dccc294d9ca8174bd1ccc8276e5 562 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 1 557 1.2E-261 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 YE2960 95913dccc294d9ca8174bd1ccc8276e5 562 PIRSF PIRSF001294 1 560 3.6E-239 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 YE2960 95913dccc294d9ca8174bd1ccc8276e5 562 PANTHER PTHR30607 2 562 0.0 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 YE2960 95913dccc294d9ca8174bd1ccc8276e5 562 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 2 558 35.305 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 YE2960 95913dccc294d9ca8174bd1ccc8276e5 562 Pfam PF03814 Potassium-transporting ATPase A subunit 12 556 7.0E-241 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 YE2955 9a530d36ac57e16965d2cc0816994a9c 247 Gene3D G3DSA:3.40.1390.30 1 107 1.1E-38 T 22-04-2016 YE2955 9a530d36ac57e16965d2cc0816994a9c 247 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 7 233 8.3E-57 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 YE2955 9a530d36ac57e16965d2cc0816994a9c 247 Gene3D G3DSA:3.40.1390.30 108 214 4.6E-28 T 22-04-2016 YE2955 9a530d36ac57e16965d2cc0816994a9c 247 SUPERFAMILY SSF102705 1 246 5.62E-83 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 YE2955 9a530d36ac57e16965d2cc0816994a9c 247 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 246 3.4E-70 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 YE2955 9a530d36ac57e16965d2cc0816994a9c 247 PANTHER PTHR13799 1 243 1.0E-87 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 YE1715 e87e4352bf19d944d2bbbb4c3b17ddd5 411 PANTHER PTHR11014:SF3 2 91 2.3E-197 T 22-04-2016 YE1715 e87e4352bf19d944d2bbbb4c3b17ddd5 411 PANTHER PTHR11014:SF3 131 409 2.3E-197 T 22-04-2016 YE1715 e87e4352bf19d944d2bbbb4c3b17ddd5 411 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 138 176 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 YE1715 e87e4352bf19d944d2bbbb4c3b17ddd5 411 SUPERFAMILY SSF53187 322 406 1.01E-78 T 22-04-2016 YE1715 e87e4352bf19d944d2bbbb4c3b17ddd5 411 SUPERFAMILY SSF53187 1 209 1.01E-78 T 22-04-2016 YE1715 e87e4352bf19d944d2bbbb4c3b17ddd5 411 Gene3D G3DSA:3.30.70.360 209 319 3.9E-43 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain YE1715 e87e4352bf19d944d2bbbb4c3b17ddd5 411 Pfam PF07687 Peptidase dimerisation domain 206 302 4.3E-11 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain YE1715 e87e4352bf19d944d2bbbb4c3b17ddd5 411 Hamap MF_00550 Peptidase T [pepT]. 1 404 54.992 T 22-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 YE1715 e87e4352bf19d944d2bbbb4c3b17ddd5 411 PANTHER PTHR11014 2 91 2.3E-197 T 22-04-2016 YE1715 e87e4352bf19d944d2bbbb4c3b17ddd5 411 PANTHER PTHR11014 131 409 2.3E-197 T 22-04-2016 YE1715 e87e4352bf19d944d2bbbb4c3b17ddd5 411 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 YE1715 e87e4352bf19d944d2bbbb4c3b17ddd5 411 TIGRFAM TIGR01882 peptidase-T: peptidase T 2 408 1.4E-156 T 22-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 YE1715 e87e4352bf19d944d2bbbb4c3b17ddd5 411 Pfam PF01546 Peptidase family M20/M25/M40 139 401 2.7E-15 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 YE1715 e87e4352bf19d944d2bbbb4c3b17ddd5 411 Gene3D G3DSA:3.40.630.10 322 407 4.9E-113 T 22-04-2016 YE1715 e87e4352bf19d944d2bbbb4c3b17ddd5 411 Gene3D G3DSA:3.40.630.10 1 208 4.9E-113 T 22-04-2016 YE1715 e87e4352bf19d944d2bbbb4c3b17ddd5 411 SUPERFAMILY SSF55031 208 320 1.57E-41 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain YE1715 e87e4352bf19d944d2bbbb4c3b17ddd5 411 PIRSF PIRSF037215 1 408 2.5E-183 T 22-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 YE1204 76cf3b759cbaad0e06186e9c54b14c70 132 Pfam PF13518 Helix-turn-helix domain 16 55 9.9E-6 T 22-04-2016 YE1204 76cf3b759cbaad0e06186e9c54b14c70 132 SUPERFAMILY SSF48295 4 62 4.03E-13 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 YE1204 76cf3b759cbaad0e06186e9c54b14c70 132 Gene3D G3DSA:1.10.10.60 15 100 3.0E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE3694 0f5150b3129b1d3b1767b4de7fa360c9 152 PANTHER PTHR33204 1 143 3.1E-62 T 22-04-2016 YE3694 0f5150b3129b1d3b1767b4de7fa360c9 152 PANTHER PTHR33204:SF3 1 143 3.1E-62 T 22-04-2016 YE3694 0f5150b3129b1d3b1767b4de7fa360c9 152 Pfam PF01638 HxlR-like helix-turn-helix 22 107 2.5E-20 T 22-04-2016 IPR002577 Helix-turn-helix, HxlR type YE3694 0f5150b3129b1d3b1767b4de7fa360c9 152 SUPERFAMILY SSF46785 11 145 8.56E-38 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3694 0f5150b3129b1d3b1767b4de7fa360c9 152 Gene3D G3DSA:1.10.10.10 2 112 1.4E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0222 cbf32b8d491b06bec04bcc4be3c3b20e 127 Pfam PF10694 Protein of unknown function (DUF2500) 5 120 5.6E-38 T 22-04-2016 IPR019635 Protein of unknown function DUF2500 YE1290 1427138af6fb4a36d64348163186fc0b 464 Pfam PF02264 LamB porin 87 464 1.3E-75 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 YE1290 1427138af6fb4a36d64348163186fc0b 464 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 113 212 7.0E-51 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 YE1290 1427138af6fb4a36d64348163186fc0b 464 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 372 449 8.0E-5 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 YE1290 1427138af6fb4a36d64348163186fc0b 464 SUPERFAMILY SSF56935 85 464 9.89E-91 T 22-04-2016 YE1290 1427138af6fb4a36d64348163186fc0b 464 Gene3D G3DSA:2.40.170.10 86 464 4.7E-86 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 YE3381 d7e3a5c3a70bc383662522b7dae78416 173 PIRSF PIRSF038996 1 171 1.2E-54 T 22-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 YE3381 d7e3a5c3a70bc383662522b7dae78416 173 SUPERFAMILY SSF52218 1 169 4.64E-46 T 22-04-2016 IPR029039 Flavoprotein-like domain YE3381 d7e3a5c3a70bc383662522b7dae78416 173 PANTHER PTHR19384:SF73 142 169 7.2E-78 T 22-04-2016 YE3381 d7e3a5c3a70bc383662522b7dae78416 173 PANTHER PTHR19384:SF73 1 119 7.2E-78 T 22-04-2016 YE3381 d7e3a5c3a70bc383662522b7dae78416 173 Pfam PF00258 Flavodoxin 5 161 5.7E-27 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 YE3381 d7e3a5c3a70bc383662522b7dae78416 173 Gene3D G3DSA:3.40.50.360 1 169 2.0E-54 T 22-04-2016 IPR029039 Flavoprotein-like domain YE3381 d7e3a5c3a70bc383662522b7dae78416 173 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 22-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 YE3381 d7e3a5c3a70bc383662522b7dae78416 173 TIGRFAM TIGR01752 flav_long: flavodoxin 2 169 2.9E-72 T 22-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 YE3381 d7e3a5c3a70bc383662522b7dae78416 173 PANTHER PTHR19384 142 169 7.2E-78 T 22-04-2016 YE3381 d7e3a5c3a70bc383662522b7dae78416 173 PANTHER PTHR19384 1 119 7.2E-78 T 22-04-2016 YE2367 767fcfaeb5b7ffef14b153bf41deaf65 307 PANTHER PTHR30163:SF2 1 305 1.4E-132 T 22-04-2016 YE2367 767fcfaeb5b7ffef14b153bf41deaf65 307 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 11 306 2.6E-119 T 22-04-2016 IPR011970 Lytic murein transglycosylase YE2367 767fcfaeb5b7ffef14b153bf41deaf65 307 Pfam PF13406 Transglycosylase SLT domain 12 303 2.3E-105 T 22-04-2016 IPR031304 Transglycosylase SLT domain 2 YE2367 767fcfaeb5b7ffef14b153bf41deaf65 307 SUPERFAMILY SSF53955 7 305 8.44E-98 T 22-04-2016 IPR023346 Lysozyme-like domain YE2367 767fcfaeb5b7ffef14b153bf41deaf65 307 PANTHER PTHR30163 1 305 1.4E-132 T 22-04-2016 IPR011757 Lytic transglycosylase MltB YE2367 767fcfaeb5b7ffef14b153bf41deaf65 307 Gene3D G3DSA:1.10.530.10 193 306 1.8E-56 T 22-04-2016 YE2367 767fcfaeb5b7ffef14b153bf41deaf65 307 Gene3D G3DSA:1.10.530.10 56 112 1.8E-56 T 22-04-2016 YE0559 bfaa4119ddcf0f66b425055041b1fa0f 362 SUPERFAMILY SSF53850 143 353 8.69E-41 T 22-04-2016 YE0559 bfaa4119ddcf0f66b425055041b1fa0f 362 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 73 84 4.0E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE0559 bfaa4119ddcf0f66b425055041b1fa0f 362 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 84 94 4.0E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE0559 bfaa4119ddcf0f66b425055041b1fa0f 362 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 94 105 4.0E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE0559 bfaa4119ddcf0f66b425055041b1fa0f 362 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 59 116 8.0E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE0559 bfaa4119ddcf0f66b425055041b1fa0f 362 SUPERFAMILY SSF46785 50 166 3.25E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0559 bfaa4119ddcf0f66b425055041b1fa0f 362 Pfam PF03466 LysR substrate binding domain 143 348 1.3E-37 T 22-04-2016 IPR005119 LysR, substrate-binding YE0559 bfaa4119ddcf0f66b425055041b1fa0f 362 Gene3D G3DSA:1.10.10.10 55 134 9.1E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0559 bfaa4119ddcf0f66b425055041b1fa0f 362 Gene3D G3DSA:3.40.190.10 146 230 2.0E-22 T 22-04-2016 YE0559 bfaa4119ddcf0f66b425055041b1fa0f 362 Gene3D G3DSA:3.40.190.10 231 313 1.6E-15 T 22-04-2016 YE0559 bfaa4119ddcf0f66b425055041b1fa0f 362 PANTHER PTHR30537:SF7 50 357 1.1E-118 T 22-04-2016 YE0559 bfaa4119ddcf0f66b425055041b1fa0f 362 PANTHER PTHR30537 50 357 1.1E-118 T 22-04-2016 YE0914 757a349d00ac10509501e7b92a854534 300 Pfam PF03466 LysR substrate binding domain 91 293 1.5E-40 T 22-04-2016 IPR005119 LysR, substrate-binding YE0914 757a349d00ac10509501e7b92a854534 300 PANTHER PTHR30126 3 293 8.2E-116 T 22-04-2016 YE0914 757a349d00ac10509501e7b92a854534 300 SUPERFAMILY SSF46785 5 85 1.19E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0914 757a349d00ac10509501e7b92a854534 300 Gene3D G3DSA:3.40.190.10 93 178 2.0E-23 T 22-04-2016 YE0914 757a349d00ac10509501e7b92a854534 300 SUPERFAMILY SSF53850 91 293 6.88E-41 T 22-04-2016 YE0914 757a349d00ac10509501e7b92a854534 300 Gene3D G3DSA:1.10.10.10 4 84 1.3E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0914 757a349d00ac10509501e7b92a854534 300 PANTHER PTHR30126:SF15 3 293 8.2E-116 T 22-04-2016 YE0914 757a349d00ac10509501e7b92a854534 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 4.4E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE0914 757a349d00ac10509501e7b92a854534 300 Gene3D G3DSA:3.40.190.10 179 259 2.1E-20 T 22-04-2016 YE3795 738ba240690a76a855ad4da3c854b2dc 311 Gene3D G3DSA:2.40.50.100 47 80 6.8E-18 T 22-04-2016 YE3795 738ba240690a76a855ad4da3c854b2dc 311 Gene3D G3DSA:2.40.50.100 154 187 6.8E-18 T 22-04-2016 YE3795 738ba240690a76a855ad4da3c854b2dc 311 Pfam PF13533 Biotin-lipoyl like 47 95 1.3E-18 T 22-04-2016 YE3795 738ba240690a76a855ad4da3c854b2dc 311 PANTHER PTHR30367:SF3 1 309 7.5E-205 T 22-04-2016 YE3795 738ba240690a76a855ad4da3c854b2dc 311 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 251 4.4E-30 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 YE3795 738ba240690a76a855ad4da3c854b2dc 311 Pfam PF13437 HlyD family secretion protein 156 240 1.7E-9 T 22-04-2016 YE3795 738ba240690a76a855ad4da3c854b2dc 311 SUPERFAMILY SSF111369 46 212 9.29E-22 T 22-04-2016 YE3795 738ba240690a76a855ad4da3c854b2dc 311 Hamap MF_01544 p-hydroxybenzoic acid efflux pump subunit AaeA [aaeA]. 1 311 57.016 T 22-04-2016 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA YE3795 738ba240690a76a855ad4da3c854b2dc 311 PANTHER PTHR30367 1 309 7.5E-205 T 22-04-2016 YE0060 1fc59ee7ddc7bcae0c03584016e7998f 198 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 198 40.916 T 22-04-2016 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 YE0060 1fc59ee7ddc7bcae0c03584016e7998f 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 61 1.5E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 YE0060 1fc59ee7ddc7bcae0c03584016e7998f 198 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site YE0060 1fc59ee7ddc7bcae0c03584016e7998f 198 PANTHER PTHR30055:SF58 1 193 9.8E-122 T 22-04-2016 YE0060 1fc59ee7ddc7bcae0c03584016e7998f 198 SUPERFAMILY SSF48498 86 193 7.12E-6 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal YE0060 1fc59ee7ddc7bcae0c03584016e7998f 198 SUPERFAMILY SSF46689 10 73 9.48E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE0060 1fc59ee7ddc7bcae0c03584016e7998f 198 Gene3D G3DSA:1.10.357.10 8 195 1.9E-35 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 YE0060 1fc59ee7ddc7bcae0c03584016e7998f 198 PANTHER PTHR30055 1 193 9.8E-122 T 22-04-2016 YE1296 328dc8b756c2edbc436307ba30e54273 433 SUPERFAMILY SSF53254 30 429 3.7E-67 T 22-04-2016 IPR029033 Histidine phosphatase superfamily YE1296 328dc8b756c2edbc436307ba30e54273 433 PANTHER PTHR41972 1 433 1.0E-122 T 22-04-2016 YE1296 328dc8b756c2edbc436307ba30e54273 433 Gene3D G3DSA:3.40.50.1240 145 285 3.3E-56 T 22-04-2016 IPR029033 Histidine phosphatase superfamily YE1296 328dc8b756c2edbc436307ba30e54273 433 ProSitePatterns PS00616 Histidine acid phosphatases phosphohistidine signature. 34 48 - T 22-04-2016 IPR033379 Histidine acid phosphatase active site YE1296 328dc8b756c2edbc436307ba30e54273 433 Gene3D G3DSA:3.40.50.1240 287 431 3.2E-76 T 22-04-2016 IPR029033 Histidine phosphatase superfamily YE1296 328dc8b756c2edbc436307ba30e54273 433 Gene3D G3DSA:3.40.50.1240 30 144 3.2E-76 T 22-04-2016 IPR029033 Histidine phosphatase superfamily YE1296 328dc8b756c2edbc436307ba30e54273 433 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 33 136 5.6E-7 T 22-04-2016 IPR000560 Histidine phosphatase superfamily, clade-2 GO:0003993 YE1296 328dc8b756c2edbc436307ba30e54273 433 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 318 381 1.6E-4 T 22-04-2016 IPR000560 Histidine phosphatase superfamily, clade-2 GO:0003993 YE1296 328dc8b756c2edbc436307ba30e54273 433 ProSitePatterns PS00778 Histidine acid phosphatases active site signature. 324 340 - T 22-04-2016 IPR033379 Histidine acid phosphatase active site YE3742 544b4423a62369c8eb1cff0387d1da1b 375 SUPERFAMILY SSF52540 66 209 1.65E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3742 544b4423a62369c8eb1cff0387d1da1b 375 Gene3D G3DSA:3.40.50.300 47 185 1.8E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3742 544b4423a62369c8eb1cff0387d1da1b 375 Hamap MF_01919 Cell division protein ZapE [zapE]. 4 375 52.876 T 22-04-2016 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 YE3742 544b4423a62369c8eb1cff0387d1da1b 375 Pfam PF03969 AFG1-like ATPase 6 370 1.0E-144 T 22-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 YE3742 544b4423a62369c8eb1cff0387d1da1b 375 PANTHER PTHR12169 1 375 5.0E-197 T 22-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 YE3742 544b4423a62369c8eb1cff0387d1da1b 375 PANTHER PTHR12169:SF11 1 375 5.0E-197 T 22-04-2016 YE3692 c9c7fa0ab6732d5276092f466509e70c 518 PIRSF PIRSF006060 3 492 2.0E-54 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YE3692 c9c7fa0ab6732d5276092f466509e70c 518 PANTHER PTHR11785 18 473 8.4E-96 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YE3692 c9c7fa0ab6732d5276092f466509e70c 518 PANTHER PTHR11785:SF216 18 473 8.4E-96 T 22-04-2016 YE3692 c9c7fa0ab6732d5276092f466509e70c 518 TIGRFAM TIGR03813 put_Glu_GABA_T: putative glutamate/gamma-aminobutyrate antiporter 16 489 3.4E-272 T 22-04-2016 IPR022520 Putative glutamate/gamma-aminobutyrate antiporter YE3692 c9c7fa0ab6732d5276092f466509e70c 518 Pfam PF13520 Amino acid permease 21 456 1.2E-60 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YE3068 856f68b7434816b814ff9185bb28c62e 563 SUPERFAMILY SSF51735 418 547 1.7E-26 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3068 856f68b7434816b814ff9185bb28c62e 563 Pfam PF02254 TrkA-N domain 421 534 2.4E-21 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 YE3068 856f68b7434816b814ff9185bb28c62e 563 PANTHER PTHR16254:SF17 1 550 0.0 T 22-04-2016 YE3068 856f68b7434816b814ff9185bb28c62e 563 Gene3D G3DSA:3.40.50.720 413 547 5.6E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3068 856f68b7434816b814ff9185bb28c62e 563 Pfam PF00999 Sodium/hydrogen exchanger family 13 384 4.5E-78 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 YE3068 856f68b7434816b814ff9185bb28c62e 563 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 15 294 2.9E-82 T 22-04-2016 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 YE3068 856f68b7434816b814ff9185bb28c62e 563 PANTHER PTHR16254 1 550 0.0 T 22-04-2016 YE0727 325d8e25f5d12b34d1a9ffb5af4638cf 185 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 13 181 2.1E-34 T 22-04-2016 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 YE0727 325d8e25f5d12b34d1a9ffb5af4638cf 185 PANTHER PTHR35561 13 183 5.4E-52 T 22-04-2016 YE0727 325d8e25f5d12b34d1a9ffb5af4638cf 185 PANTHER PTHR35561:SF1 13 183 5.4E-52 T 22-04-2016 YE0727 325d8e25f5d12b34d1a9ffb5af4638cf 185 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 12 181 21.344 T 22-04-2016 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 YE0727 325d8e25f5d12b34d1a9ffb5af4638cf 185 Pfam PF13563 2'-5' RNA ligase superfamily 21 139 2.2E-10 T 22-04-2016 YE0727 325d8e25f5d12b34d1a9ffb5af4638cf 185 SUPERFAMILY SSF55144 12 182 3.92E-42 T 22-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase YE0727 325d8e25f5d12b34d1a9ffb5af4638cf 185 Gene3D G3DSA:3.90.1140.10 13 183 5.3E-47 T 22-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase YE3984 db3aa26431ec75a04b412110bd78e58a 135 PIRSF PIRSF016821 8 135 1.3E-42 T 22-04-2016 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 YE3984 db3aa26431ec75a04b412110bd78e58a 135 PANTHER PTHR11079:SF70 111 117 4.1E-29 T 22-04-2016 YE3984 db3aa26431ec75a04b412110bd78e58a 135 PANTHER PTHR11079:SF70 7 64 4.1E-29 T 22-04-2016 YE3984 db3aa26431ec75a04b412110bd78e58a 135 SUPERFAMILY SSF55174 10 106 6.41E-31 T 22-04-2016 YE3984 db3aa26431ec75a04b412110bd78e58a 135 Pfam PF01479 S4 domain 11 57 1.3E-11 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YE3984 db3aa26431ec75a04b412110bd78e58a 135 SMART SM00363 11 72 5.8E-8 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YE3984 db3aa26431ec75a04b412110bd78e58a 135 PANTHER PTHR11079 111 117 4.1E-29 T 22-04-2016 YE3984 db3aa26431ec75a04b412110bd78e58a 135 PANTHER PTHR11079 7 64 4.1E-29 T 22-04-2016 YE3984 db3aa26431ec75a04b412110bd78e58a 135 Gene3D G3DSA:3.10.290.10 8 105 6.5E-39 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YE3549 ca467161b7c96757d6ca10e44f1dedef 226 SUPERFAMILY SSF46689 170 218 1.79E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE3549 ca467161b7c96757d6ca10e44f1dedef 226 Pfam PF12833 Helix-turn-helix domain 140 218 4.5E-13 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YE3549 ca467161b7c96757d6ca10e44f1dedef 226 PANTHER PTHR11019 133 225 6.4E-14 T 22-04-2016 YE3549 ca467161b7c96757d6ca10e44f1dedef 226 SMART SM00342 134 217 7.3E-11 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YE3549 ca467161b7c96757d6ca10e44f1dedef 226 Gene3D G3DSA:1.10.10.60 170 218 4.5E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE0037 e92af99ab5675608dc7d7a8c6d50ca0d 228 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 204 1.3E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE0037 e92af99ab5675608dc7d7a8c6d50ca0d 228 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 2.1E-5 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE0037 e92af99ab5675608dc7d7a8c6d50ca0d 228 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 2.1E-5 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE0037 e92af99ab5675608dc7d7a8c6d50ca0d 228 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 2.1E-5 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE0037 e92af99ab5675608dc7d7a8c6d50ca0d 228 SMART SM00421 148 205 6.6E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE0037 e92af99ab5675608dc7d7a8c6d50ca0d 228 Pfam PF08448 PAS fold 16 125 1.5E-10 T 22-04-2016 IPR013656 PAS fold-4 YE0037 e92af99ab5675608dc7d7a8c6d50ca0d 228 Gene3D G3DSA:1.10.10.10 146 210 9.2E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0037 e92af99ab5675608dc7d7a8c6d50ca0d 228 SUPERFAMILY SSF46894 143 210 2.11E-16 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YE2814 aced84f8b397561cff6e46bb7633c07f 506 ProSitePatterns PS00211 ABC transporters family signature. 407 421 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE2814 aced84f8b397561cff6e46bb7633c07f 506 SUPERFAMILY SSF52540 12 236 2.13E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2814 aced84f8b397561cff6e46bb7633c07f 506 SMART SM00382 38 233 5.5E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain YE2814 aced84f8b397561cff6e46bb7633c07f 506 SMART SM00382 288 483 2.2 T 22-04-2016 IPR003593 AAA+ ATPase domain YE2814 aced84f8b397561cff6e46bb7633c07f 506 PANTHER PTHR24220 15 388 1.4E-295 T 22-04-2016 YE2814 aced84f8b397561cff6e46bb7633c07f 506 SUPERFAMILY SSF52540 254 492 1.81E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2814 aced84f8b397561cff6e46bb7633c07f 506 PANTHER PTHR24220:SF303 15 388 1.4E-295 T 22-04-2016 YE2814 aced84f8b397561cff6e46bb7633c07f 506 Pfam PF00005 ABC transporter 29 178 2.1E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE2814 aced84f8b397561cff6e46bb7633c07f 506 Pfam PF00005 ABC transporter 280 434 6.9E-17 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE2814 aced84f8b397561cff6e46bb7633c07f 506 Gene3D G3DSA:3.40.50.300 262 498 1.3E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2814 aced84f8b397561cff6e46bb7633c07f 506 Gene3D G3DSA:3.40.50.300 10 241 2.8E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0452 5b3d6d0649381f0b4347efc008968ad5 167 PANTHER PTHR23091 3 127 9.4E-20 T 22-04-2016 YE0452 5b3d6d0649381f0b4347efc008968ad5 167 Gene3D G3DSA:3.40.630.30 3 128 3.1E-15 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE0452 5b3d6d0649381f0b4347efc008968ad5 167 PANTHER PTHR23091:SF237 3 127 9.4E-20 T 22-04-2016 YE0452 5b3d6d0649381f0b4347efc008968ad5 167 SUPERFAMILY SSF55729 3 160 1.05E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE0452 5b3d6d0649381f0b4347efc008968ad5 167 Pfam PF00583 Acetyltransferase (GNAT) family 49 122 2.8E-7 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YE3242 993b6ce0504426b1299888d21a425e75 390 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 289 3.7E-12 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YE3242 993b6ce0504426b1299888d21a425e75 390 TIGRFAM TIGR00998 8a0101: efflux pump membrane protein 20 345 1.5E-132 T 22-04-2016 IPR005694 Efflux pump membrane protein Emr GO:0006855|GO:0015238 YE3242 993b6ce0504426b1299888d21a425e75 390 PANTHER PTHR30386:SF6 1 376 7.0E-198 T 22-04-2016 YE3242 993b6ce0504426b1299888d21a425e75 390 Gene3D G3DSA:2.40.50.100 60 94 4.1E-18 T 22-04-2016 YE3242 993b6ce0504426b1299888d21a425e75 390 Gene3D G3DSA:2.40.50.100 215 248 4.1E-18 T 22-04-2016 YE3242 993b6ce0504426b1299888d21a425e75 390 Pfam PF00529 HlyD membrane-fusion protein of T1SS 36 347 8.1E-16 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 YE3242 993b6ce0504426b1299888d21a425e75 390 SUPERFAMILY SSF111369 57 113 7.59E-7 T 22-04-2016 YE3242 993b6ce0504426b1299888d21a425e75 390 SUPERFAMILY SSF111369 167 269 9.29E-10 T 22-04-2016 YE3242 993b6ce0504426b1299888d21a425e75 390 PANTHER PTHR30386 1 376 7.0E-198 T 22-04-2016 YE1976 8ebf355a36866e4b567e16bdb8a4e89c 231 SMART SM01007 7 198 2.7E-68 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal YE1976 8ebf355a36866e4b567e16bdb8a4e89c 231 TIGRFAM TIGR00760 araD: L-ribulose-5-phosphate 4-epimerase 1 231 2.7E-127 T 22-04-2016 IPR004661 L-ribulose-5-phosphate 4-epimerase GO:0008270|GO:0008742|GO:0019572 KEGG: 00040+5.1.3.4|KEGG: 00053+5.1.3.4|MetaCyc: PWY-6961 YE1976 8ebf355a36866e4b567e16bdb8a4e89c 231 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 196 2.9E-45 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal YE1976 8ebf355a36866e4b567e16bdb8a4e89c 231 PANTHER PTHR22789 1 231 2.5E-156 T 22-04-2016 YE1976 8ebf355a36866e4b567e16bdb8a4e89c 231 SUPERFAMILY SSF53639 1 223 3.14E-69 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal YE1976 8ebf355a36866e4b567e16bdb8a4e89c 231 Gene3D G3DSA:3.40.225.10 2 231 2.2E-72 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal YE1976 8ebf355a36866e4b567e16bdb8a4e89c 231 PANTHER PTHR22789:SF7 1 231 2.5E-156 T 22-04-2016 YE2389 9d3dd265993d29eb664b1d2bf3d1bc3b 252 Pfam PF00005 ABC transporter 20 149 4.5E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE2389 9d3dd265993d29eb664b1d2bf3d1bc3b 252 SUPERFAMILY SSF52540 3 224 1.44E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2389 9d3dd265993d29eb664b1d2bf3d1bc3b 252 SMART SM00382 29 199 9.2E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain YE2389 9d3dd265993d29eb664b1d2bf3d1bc3b 252 Gene3D G3DSA:3.40.50.300 3 220 3.0E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2389 9d3dd265993d29eb664b1d2bf3d1bc3b 252 PANTHER PTHR24220:SF466 6 245 4.9E-156 T 22-04-2016 YE2389 9d3dd265993d29eb664b1d2bf3d1bc3b 252 PANTHER PTHR24220 6 245 4.9E-156 T 22-04-2016 YE2493 cd10cb226ebf57b1d1fc1d3c9d211744 373 Pfam PF12704 MacB-like periplasmic core domain 26 188 5.1E-12 T 22-04-2016 IPR025857 MacB-like periplasmic core domain YE2493 cd10cb226ebf57b1d1fc1d3c9d211744 373 PANTHER PTHR30489 4 373 5.1E-55 T 22-04-2016 YE2493 cd10cb226ebf57b1d1fc1d3c9d211744 373 Pfam PF02687 FtsX-like permease family 252 366 5.7E-20 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 YE3619 f5d11bc75c851cc127d76f6757f919b1 356 Gene3D G3DSA:1.10.3470.10 28 351 1.6E-99 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YE3619 f5d11bc75c851cc127d76f6757f919b1 356 SUPERFAMILY SSF81345 27 349 4.32E-79 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YE3619 f5d11bc75c851cc127d76f6757f919b1 356 PANTHER PTHR30472 28 354 9.9E-143 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 YE3619 f5d11bc75c851cc127d76f6757f919b1 356 PANTHER PTHR30472:SF31 28 354 9.9E-143 T 22-04-2016 YE3619 f5d11bc75c851cc127d76f6757f919b1 356 Pfam PF01032 FecCD transport family 40 348 9.2E-89 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 YE2731 89d5e8e5800c1092aa849d93494c5f59 223 Pfam PF02288 Dehydratase medium subunit 68 180 3.4E-34 T 22-04-2016 IPR003208 Diol/glycerol dehydratase/dehydratase reactivating factor YE2731 89d5e8e5800c1092aa849d93494c5f59 223 PIRSF PIRSF018506 1 223 4.2E-110 T 22-04-2016 IPR025541 Propanediol/glycerol dehydratase, medium subunit KEGG: 00640+4.2.1.28|MetaCyc: PWY-7013|UniPathway: UPA00621 YE2731 89d5e8e5800c1092aa849d93494c5f59 223 SUPERFAMILY SSF52968 46 223 3.27E-72 T 22-04-2016 IPR010254 B12-dependent dehydratases, beta subunit YE2731 89d5e8e5800c1092aa849d93494c5f59 223 Gene3D G3DSA:3.40.50.10150 46 222 2.1E-87 T 22-04-2016 IPR010254 B12-dependent dehydratases, beta subunit YE0361 f19f2b393f8041bdd0f2d268633a7bd6 118 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 3 118 1.0E-47 T 22-04-2016 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 YE0361 f19f2b393f8041bdd0f2d268633a7bd6 118 Pfam PF02313 Fumarate reductase subunit D 5 116 5.0E-50 T 22-04-2016 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 YE0361 f19f2b393f8041bdd0f2d268633a7bd6 118 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 1 118 26.552 T 22-04-2016 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 YE0361 f19f2b393f8041bdd0f2d268633a7bd6 118 PIRSF PIRSF000179 1 118 3.3E-50 T 22-04-2016 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 YE0361 f19f2b393f8041bdd0f2d268633a7bd6 118 Gene3D G3DSA:1.20.1300.10 2 118 7.8E-54 T 22-04-2016 YE0361 f19f2b393f8041bdd0f2d268633a7bd6 118 SUPERFAMILY SSF81343 1 118 1.2E-51 T 22-04-2016 YE1514 81e55897552156c208b2294b119e2960 371 SUPERFAMILY SSF111369 53 299 2.48E-29 T 22-04-2016 YE1514 81e55897552156c208b2294b119e2960 371 PANTHER PTHR30572:SF10 8 365 2.5E-227 T 22-04-2016 IPR030190 Macrolide export protein MacA GO:0006810|GO:0019898|GO:0022891 YE1514 81e55897552156c208b2294b119e2960 371 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 50 295 3.8E-22 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YE1514 81e55897552156c208b2294b119e2960 371 Gene3D G3DSA:2.40.50.100 62 95 5.4E-16 T 22-04-2016 YE1514 81e55897552156c208b2294b119e2960 371 Gene3D G3DSA:2.40.50.100 184 215 5.4E-16 T 22-04-2016 YE1514 81e55897552156c208b2294b119e2960 371 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 39 364 1.8E-60 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 YE1514 81e55897552156c208b2294b119e2960 371 PANTHER PTHR30572 8 365 2.5E-227 T 22-04-2016 YE0186 3914c549e907740d97173f4142206f4e 248 SUPERFAMILY SSF69618 1 247 1.44E-58 T 22-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YE0186 3914c549e907740d97173f4142206f4e 248 Gene3D G3DSA:3.40.50.10090 147 247 1.0E-8 T 22-04-2016 YE0186 3914c549e907740d97173f4142206f4e 248 Gene3D G3DSA:3.40.50.10090 29 146 5.8E-14 T 22-04-2016 YE0186 3914c549e907740d97173f4142206f4e 248 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 242 5.4E-46 T 22-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 YE0186 3914c549e907740d97173f4142206f4e 248 PANTHER PTHR38042:SF1 1 246 3.9E-89 T 22-04-2016 YE0186 3914c549e907740d97173f4142206f4e 248 PANTHER PTHR38042 1 246 3.9E-89 T 22-04-2016 YE2177 ff50f120b8b40f4058a829c9c2a21314 273 PANTHER PTHR31756:SF3 1 273 8.8E-128 T 22-04-2016 YE2177 ff50f120b8b40f4058a829c9c2a21314 273 Pfam PF03618 Kinase/pyrophosphorylase 5 263 4.8E-73 T 22-04-2016 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 YE2177 ff50f120b8b40f4058a829c9c2a21314 273 PANTHER PTHR31756 1 273 8.8E-128 T 22-04-2016 YE2177 ff50f120b8b40f4058a829c9c2a21314 273 SUPERFAMILY SSF47454 173 230 6.28E-5 T 22-04-2016 IPR008917 Transcription factor, Skn-1-like, DNA-binding domain GO:0003677|GO:0006355 YE2177 ff50f120b8b40f4058a829c9c2a21314 273 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 2 272 73.769 T 22-04-2016 IPR026530 Phosphoenolpyruvate synthase regulatory protein YE0600 4ecd0ab3b34c57126197306d7881cb19 819 Gene3D G3DSA:3.40.1160.10 1 49 3.7E-68 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YE0600 4ecd0ab3b34c57126197306d7881cb19 819 Gene3D G3DSA:3.40.1160.10 111 299 3.7E-68 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YE0600 4ecd0ab3b34c57126197306d7881cb19 819 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 7.5E-144 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 YE0600 4ecd0ab3b34c57126197306d7881cb19 819 SUPERFAMILY SSF53633 1 297 7.02E-73 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YE0600 4ecd0ab3b34c57126197306d7881cb19 819 SUPERFAMILY SSF55021 304 381 6.79E-23 T 22-04-2016 YE0600 4ecd0ab3b34c57126197306d7881cb19 819 Pfam PF00742 Homoserine dehydrogenase 614 810 8.2E-49 T 22-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 YE0600 4ecd0ab3b34c57126197306d7881cb19 819 Gene3D G3DSA:3.30.360.10 636 791 1.0E-55 T 22-04-2016 YE0600 4ecd0ab3b34c57126197306d7881cb19 819 Pfam PF01842 ACT domain 324 377 4.5E-9 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 YE0600 4ecd0ab3b34c57126197306d7881cb19 819 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 YE0600 4ecd0ab3b34c57126197306d7881cb19 819 SUPERFAMILY SSF55021 384 476 8.1E-22 T 22-04-2016 YE0600 4ecd0ab3b34c57126197306d7881cb19 819 Gene3D G3DSA:3.40.50.720 464 635 5.5E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain YE0600 4ecd0ab3b34c57126197306d7881cb19 819 PANTHER PTHR21499:SF1 1 471 4.5E-188 T 22-04-2016 YE0600 4ecd0ab3b34c57126197306d7881cb19 819 Pfam PF13840 ACT domain 395 453 9.0E-8 T 22-04-2016 IPR027795 GATS-like ACT domain YE0600 4ecd0ab3b34c57126197306d7881cb19 819 SUPERFAMILY SSF51735 464 636 1.91E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain YE0600 4ecd0ab3b34c57126197306d7881cb19 819 PANTHER PTHR21499 1 471 4.5E-188 T 22-04-2016 YE0600 4ecd0ab3b34c57126197306d7881cb19 819 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 605 2.7E-27 T 22-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 YE0600 4ecd0ab3b34c57126197306d7881cb19 819 PIRSF PIRSF000727 1 817 0.0 T 22-04-2016 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00050|UniPathway: UPA00051|UniPathway: UPA00051 YE0600 4ecd0ab3b34c57126197306d7881cb19 819 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 22-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 YE0600 4ecd0ab3b34c57126197306d7881cb19 819 Pfam PF00696 Amino acid kinase family 2 284 2.3E-46 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YE0600 4ecd0ab3b34c57126197306d7881cb19 819 SUPERFAMILY SSF55347 614 797 8.5E-52 T 22-04-2016 YE2121 a394260b6cb5363f21ecf8b1311eebc0 221 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 218 6.6E-95 T 22-04-2016 IPR014319 Phage shock protein, PspA YE2121 a394260b6cb5363f21ecf8b1311eebc0 221 Pfam PF04012 PspA/IM30 family 2 216 1.8E-44 T 22-04-2016 IPR007157 PspA/IM30 YE2121 a394260b6cb5363f21ecf8b1311eebc0 221 PANTHER PTHR31088:SF7 2 219 6.7E-127 T 22-04-2016 YE2121 a394260b6cb5363f21ecf8b1311eebc0 221 PANTHER PTHR31088 2 219 6.7E-127 T 22-04-2016 YE0086 a4deb6d3c268d28a6c17a634323c2431 232 PANTHER PTHR26402:SF117 2 231 7.1E-81 T 22-04-2016 YE0086 a4deb6d3c268d28a6c17a634323c2431 232 PANTHER PTHR26402 2 231 7.1E-81 T 22-04-2016 YE0086 a4deb6d3c268d28a6c17a634323c2431 232 SMART SM00862 152 228 1.0E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YE0086 a4deb6d3c268d28a6c17a634323c2431 232 Gene3D G3DSA:3.40.50.2300 2 125 7.9E-42 T 22-04-2016 YE0086 a4deb6d3c268d28a6c17a634323c2431 232 SMART SM00448 2 111 6.0E-47 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE0086 a4deb6d3c268d28a6c17a634323c2431 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 228 4.6E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YE0086 a4deb6d3c268d28a6c17a634323c2431 232 Pfam PF00072 Response regulator receiver domain 4 112 8.8E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE0086 a4deb6d3c268d28a6c17a634323c2431 232 Gene3D G3DSA:1.10.10.10 131 230 6.2E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0086 a4deb6d3c268d28a6c17a634323c2431 232 SUPERFAMILY SSF52172 1 188 5.41E-42 T 22-04-2016 IPR011006 CheY-like superfamily YE4024 57ec5e73b27672c402f25739455e64da 166 Pfam PF00583 Acetyltransferase (GNAT) family 58 138 2.9E-14 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YE4024 57ec5e73b27672c402f25739455e64da 166 Gene3D G3DSA:3.40.630.30 2 161 7.9E-36 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE4024 57ec5e73b27672c402f25739455e64da 166 PANTHER PTHR23091 1 164 9.1E-61 T 22-04-2016 YE4024 57ec5e73b27672c402f25739455e64da 166 SUPERFAMILY SSF55729 3 162 4.08E-36 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE4024 57ec5e73b27672c402f25739455e64da 166 PANTHER PTHR23091:SF262 1 164 9.1E-61 T 22-04-2016 YE0849 30d43409b5a8f22343e74272754d17ad 238 SMART SM00448 2 112 2.4E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE0849 30d43409b5a8f22343e74272754d17ad 238 SMART SM00850 142 236 6.6E-24 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 YE0849 30d43409b5a8f22343e74272754d17ad 238 Gene3D G3DSA:2.40.50.40 134 198 8.2E-13 T 22-04-2016 YE0849 30d43409b5a8f22343e74272754d17ad 238 Pfam PF04397 LytTr DNA-binding domain 143 235 2.4E-24 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 YE0849 30d43409b5a8f22343e74272754d17ad 238 Pfam PF00072 Response regulator receiver domain 4 111 9.1E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE0849 30d43409b5a8f22343e74272754d17ad 238 SUPERFAMILY SSF52172 1 124 4.84E-32 T 22-04-2016 IPR011006 CheY-like superfamily YE0849 30d43409b5a8f22343e74272754d17ad 238 Gene3D G3DSA:2.20.25.10 213 237 2.6E-5 T 22-04-2016 YE0849 30d43409b5a8f22343e74272754d17ad 238 PANTHER PTHR26402:SF524 2 117 2.5E-37 T 22-04-2016 YE0849 30d43409b5a8f22343e74272754d17ad 238 PANTHER PTHR26402 2 117 2.5E-37 T 22-04-2016 YE0849 30d43409b5a8f22343e74272754d17ad 238 Gene3D G3DSA:3.40.50.2300 1 119 4.1E-33 T 22-04-2016 YE0376 164bee7e03ffd9d0a3bde1f06ce6784f 313 Pfam PF01715 IPP transferase 46 289 5.8E-87 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 YE0376 164bee7e03ffd9d0a3bde1f06ce6784f 313 Gene3D G3DSA:3.40.50.300 9 178 1.5E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0376 164bee7e03ffd9d0a3bde1f06ce6784f 313 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 12 299 2.0E-120 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 YE0376 164bee7e03ffd9d0a3bde1f06ce6784f 313 Gene3D G3DSA:1.10.287.890 207 288 1.1E-33 T 22-04-2016 YE0376 164bee7e03ffd9d0a3bde1f06ce6784f 313 PANTHER PTHR11088 1 302 1.1E-128 T 22-04-2016 YE0376 164bee7e03ffd9d0a3bde1f06ce6784f 313 SUPERFAMILY SSF52540 13 157 3.19E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0376 164bee7e03ffd9d0a3bde1f06ce6784f 313 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 12 312 30.016 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 YE1420 4af70e20e70c4af3a6a512a5208cafaf 75 Gene3D G3DSA:1.10.3390.10 1 75 6.9E-38 T 22-04-2016 IPR023202 YejL-like domain YE1420 4af70e20e70c4af3a6a512a5208cafaf 75 Pfam PF07208 Protein of unknown function (DUF1414) 26 69 3.8E-24 T 22-04-2016 IPR009857 Uncharacterised protein family UPF0352 YE1420 4af70e20e70c4af3a6a512a5208cafaf 75 PIRSF PIRSF006188 1 72 3.0E-35 T 22-04-2016 IPR009857 Uncharacterised protein family UPF0352 YE1420 4af70e20e70c4af3a6a512a5208cafaf 75 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 2.0E-27 T 22-04-2016 IPR009857 Uncharacterised protein family UPF0352 YE1420 4af70e20e70c4af3a6a512a5208cafaf 75 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 71 23.627 T 22-04-2016 IPR009857 Uncharacterised protein family UPF0352 YE1420 4af70e20e70c4af3a6a512a5208cafaf 75 SUPERFAMILY SSF158651 1 75 2.09E-31 T 22-04-2016 YE2546 344b8b75fce4411f136c68c1c4345680 194 PANTHER PTHR38766 32 181 2.6E-36 T 22-04-2016 YE2546 344b8b75fce4411f136c68c1c4345680 194 PANTHER PTHR38766:SF1 32 181 2.6E-36 T 22-04-2016 YE2546 344b8b75fce4411f136c68c1c4345680 194 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 72 140 1.2E-20 T 22-04-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 YE2546 344b8b75fce4411f136c68c1c4345680 194 Pfam PF04347 Flagellar biosynthesis protein, FliO 84 168 4.0E-21 T 22-04-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 YE1040 840a79f0c7685da62b07641ff6ad51dd 431 Pfam PF10797 Protein of unknown function 5 428 5.0E-166 T 22-04-2016 IPR019733 Uncharacterised protein family YhfT YE2634 a95278b864c5eee7faedae74b8e94903 479 SUPERFAMILY SSF50494 18 173 4.66E-13 T 22-04-2016 IPR009003 Peptidase S1, PA clan YE2634 a95278b864c5eee7faedae74b8e94903 479 Pfam PF13365 Trypsin-like peptidase domain 25 167 8.4E-7 T 22-04-2016 YE2634 a95278b864c5eee7faedae74b8e94903 479 Pfam PF08878 Domain of unknown function (DUF1837) 247 463 2.6E-17 T 22-04-2016 IPR014976 Protein of unknown function DUF1837 YE2634 a95278b864c5eee7faedae74b8e94903 479 Gene3D G3DSA:2.40.10.10 96 168 7.7E-5 T 22-04-2016 YE3639 a7bc091151fc5eb7f2846664fbb03a0d 280 PANTHER PTHR35007:SF1 53 280 6.4E-58 T 22-04-2016 YE3639 a7bc091151fc5eb7f2846664fbb03a0d 280 PANTHER PTHR35007 53 280 6.4E-58 T 22-04-2016 YE3639 a7bc091151fc5eb7f2846664fbb03a0d 280 Pfam PF00482 Type II secretion system (T2SS), protein F 116 237 7.4E-16 T 22-04-2016 IPR018076 Type II secretion system F domain YE0161 72a25e48fadad9c00e06b15f16d19df0 176 SUPERFAMILY SSF49401 25 175 8.45E-22 T 22-04-2016 IPR008966 Adhesion domain YE0161 72a25e48fadad9c00e06b15f16d19df0 176 Gene3D G3DSA:2.60.40.1090 25 175 2.6E-23 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YE0161 72a25e48fadad9c00e06b15f16d19df0 176 PANTHER PTHR33420 1 176 9.0E-50 T 22-04-2016 YE0161 72a25e48fadad9c00e06b15f16d19df0 176 Pfam PF16970 Type-1 fimbrial protein, A 52 175 4.3E-9 T 22-04-2016 YE0161 72a25e48fadad9c00e06b15f16d19df0 176 PANTHER PTHR33420:SF10 1 176 9.0E-50 T 22-04-2016 YE0447 53da0ccdb82e0433291ee914aab0523c 441 PANTHER PTHR35334 14 441 0.0 T 22-04-2016 YE0447 53da0ccdb82e0433291ee914aab0523c 441 PANTHER PTHR35334:SF4 14 441 0.0 T 22-04-2016 YE0327 d4b5dc6c7d6859c4a315367963d4722f 266 Pfam PF00005 ABC transporter 28 176 2.2E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE0327 d4b5dc6c7d6859c4a315367963d4722f 266 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE0327 d4b5dc6c7d6859c4a315367963d4722f 266 SUPERFAMILY SSF52540 9 242 1.22E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0327 d4b5dc6c7d6859c4a315367963d4722f 266 Gene3D G3DSA:3.40.50.300 13 246 1.3E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0327 d4b5dc6c7d6859c4a315367963d4722f 266 PANTHER PTHR24220:SF558 13 262 6.5E-98 T 22-04-2016 YE0327 d4b5dc6c7d6859c4a315367963d4722f 266 SMART SM00382 36 225 2.4E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain YE0327 d4b5dc6c7d6859c4a315367963d4722f 266 PANTHER PTHR24220 13 262 6.5E-98 T 22-04-2016 YE4125 41ff1ddc51f8c5bbdb3588621114d5c2 308 Gene3D G3DSA:1.10.10.60 219 267 4.8E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE4125 41ff1ddc51f8c5bbdb3588621114d5c2 308 Gene3D G3DSA:3.40.50.880 4 218 6.3E-40 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YE4125 41ff1ddc51f8c5bbdb3588621114d5c2 308 SMART SM00342 230 302 2.7E-5 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YE4125 41ff1ddc51f8c5bbdb3588621114d5c2 308 SUPERFAMILY SSF46689 213 263 7.62E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE4125 41ff1ddc51f8c5bbdb3588621114d5c2 308 PANTHER PTHR11019:SF58 88 307 1.5E-36 T 22-04-2016 YE4125 41ff1ddc51f8c5bbdb3588621114d5c2 308 Pfam PF01965 DJ-1/PfpI family 4 173 6.2E-12 T 22-04-2016 IPR002818 DJ-1/PfpI YE4125 41ff1ddc51f8c5bbdb3588621114d5c2 308 SUPERFAMILY SSF52317 3 195 7.2E-33 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YE4125 41ff1ddc51f8c5bbdb3588621114d5c2 308 PANTHER PTHR11019 88 307 1.5E-36 T 22-04-2016 YE4125 41ff1ddc51f8c5bbdb3588621114d5c2 308 Pfam PF12833 Helix-turn-helix domain 237 299 1.8E-11 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YE0748 04b2f51b3f12dc0b8114e16369bb542c 334 Pfam PF02371 Transposase IS116/IS110/IS902 family 210 288 7.2E-21 T 22-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 YE0748 04b2f51b3f12dc0b8114e16369bb542c 334 PANTHER PTHR33055:SF2 3 332 1.2E-123 T 22-04-2016 YE0748 04b2f51b3f12dc0b8114e16369bb542c 334 Pfam PF01548 Transposase 7 146 2.2E-18 T 22-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 YE0748 04b2f51b3f12dc0b8114e16369bb542c 334 PANTHER PTHR33055 3 332 1.2E-123 T 22-04-2016 YE2234 231eaf14edfde62b299a6d11fc649a9b 571 SUPERFAMILY SSF53850 65 552 1.26E-139 T 22-04-2016 YE2234 231eaf14edfde62b299a6d11fc649a9b 571 PANTHER PTHR30290 23 569 2.4E-188 T 22-04-2016 YE2234 231eaf14edfde62b299a6d11fc649a9b 571 Gene3D G3DSA:3.10.105.10 337 538 1.5E-59 T 22-04-2016 YE2234 231eaf14edfde62b299a6d11fc649a9b 571 PIRSF PIRSF002741 32 571 4.3E-105 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 YE2234 231eaf14edfde62b299a6d11fc649a9b 571 PANTHER PTHR30290:SF10 23 569 2.4E-188 T 22-04-2016 YE2234 231eaf14edfde62b299a6d11fc649a9b 571 Gene3D G3DSA:3.40.190.10 185 336 6.3E-53 T 22-04-2016 YE2234 231eaf14edfde62b299a6d11fc649a9b 571 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 109 490 1.6E-83 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain YE4129 8b2189d9af96b8d864a61d58268652cb 103 Pfam PF01381 Helix-turn-helix 11 62 8.4E-8 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YE4129 8b2189d9af96b8d864a61d58268652cb 103 SMART SM00530 10 64 0.0036 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YE4129 8b2189d9af96b8d864a61d58268652cb 103 Gene3D G3DSA:1.10.260.40 4 67 3.2E-9 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE4129 8b2189d9af96b8d864a61d58268652cb 103 SUPERFAMILY SSF47413 2 66 5.63E-10 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE1445 f9a759d6dfc7a2d58844f2daca424d53 382 SUPERFAMILY SSF48695 13 186 1.08E-49 T 22-04-2016 IPR011031 Multihaem cytochrome YE1445 f9a759d6dfc7a2d58844f2daca424d53 382 PANTHER PTHR30333 11 378 1.6E-135 T 22-04-2016 YE1445 f9a759d6dfc7a2d58844f2daca424d53 382 PIRSF PIRSF000014 2 382 4.6E-144 T 22-04-2016 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 YE1445 f9a759d6dfc7a2d58844f2daca424d53 382 Gene3D G3DSA:1.10.3820.10 328 333 6.4E-29 T 22-04-2016 YE1445 f9a759d6dfc7a2d58844f2daca424d53 382 Gene3D G3DSA:1.10.3820.10 12 183 6.4E-29 T 22-04-2016 YE1445 f9a759d6dfc7a2d58844f2daca424d53 382 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 11 182 3.4E-67 T 22-04-2016 IPR005126 NapC/NirT cytochrome c, N-terminal YE1445 f9a759d6dfc7a2d58844f2daca424d53 382 PANTHER PTHR30333:SF3 11 378 1.6E-135 T 22-04-2016 YE2480 d60e392092319de31c53b29220d53068 235 SUPERFAMILY SSF55729 28 198 1.86E-34 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE2480 d60e392092319de31c53b29220d53068 235 PANTHER PTHR13256 7 221 2.9E-94 T 22-04-2016 YE2480 d60e392092319de31c53b29220d53068 235 PANTHER PTHR13256:SF22 7 221 2.9E-94 T 22-04-2016 YE2480 d60e392092319de31c53b29220d53068 235 Pfam PF13302 Acetyltransferase (GNAT) domain 53 174 9.8E-14 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YE2480 d60e392092319de31c53b29220d53068 235 Gene3D G3DSA:3.40.630.30 14 214 5.3E-51 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE1152 4ddb87a27695a15ce995ae805fd4ec2f 92 Pfam PF09904 Winged helix-turn helix 3 90 1.2E-38 T 22-04-2016 IPR017162 Uncharacterised conserved protein UCP037266 YE1152 4ddb87a27695a15ce995ae805fd4ec2f 92 PIRSF PIRSF037266 1 92 7.7E-41 T 22-04-2016 IPR017162 Uncharacterised conserved protein UCP037266 YE3839 b094a9014cb326fbbc6444b540047e29 549 PANTHER PTHR10110 1 539 3.2E-209 T 22-04-2016 IPR018422 Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021 Reactome: REACT_15518 YE3839 b094a9014cb326fbbc6444b540047e29 549 PANTHER PTHR10110:SF120 1 539 3.2E-209 T 22-04-2016 YE3839 b094a9014cb326fbbc6444b540047e29 549 Pfam PF00999 Sodium/hydrogen exchanger family 8 421 6.2E-80 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 YE3839 b094a9014cb326fbbc6444b540047e29 549 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 7 546 4.9E-209 T 22-04-2016 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 YE3583 479b6c9b792b6c7f96c87ac6e2763ed4 252 SUPERFAMILY SSF52540 1 225 1.85E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3583 479b6c9b792b6c7f96c87ac6e2763ed4 252 PANTHER PTHR24220:SF471 3 249 4.8E-146 T 22-04-2016 YE3583 479b6c9b792b6c7f96c87ac6e2763ed4 252 Pfam PF00005 ABC transporter 17 164 3.2E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE3583 479b6c9b792b6c7f96c87ac6e2763ed4 252 Gene3D G3DSA:3.40.50.300 1 227 7.3E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3583 479b6c9b792b6c7f96c87ac6e2763ed4 252 SMART SM00382 26 213 2.2E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain YE3583 479b6c9b792b6c7f96c87ac6e2763ed4 252 PANTHER PTHR24220 3 249 4.8E-146 T 22-04-2016 YE4034 ddb0c13c58e4f1900520d5323d3857ac 234 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 3 200 7.4E-13 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 YE4034 ddb0c13c58e4f1900520d5323d3857ac 234 Gene3D G3DSA:3.30.1240.10 57 145 2.7E-18 T 22-04-2016 YE4034 ddb0c13c58e4f1900520d5323d3857ac 234 SUPERFAMILY SSF56784 2 231 1.48E-46 T 22-04-2016 IPR023214 HAD-like domain YE4034 ddb0c13c58e4f1900520d5323d3857ac 234 PANTHER PTHR10000 1 233 5.7E-37 T 22-04-2016 YE4034 ddb0c13c58e4f1900520d5323d3857ac 234 Pfam PF08282 haloacid dehalogenase-like hydrolase 2 224 1.8E-36 T 22-04-2016 IPR023214 HAD-like domain YE4034 ddb0c13c58e4f1900520d5323d3857ac 234 ProSitePatterns PS01229 Hypothetical cof family signature 2. 181 203 - T 22-04-2016 YE4034 ddb0c13c58e4f1900520d5323d3857ac 234 Gene3D G3DSA:3.40.50.1000 2 49 1.5E-33 T 22-04-2016 IPR023214 HAD-like domain YE4034 ddb0c13c58e4f1900520d5323d3857ac 234 Gene3D G3DSA:3.40.50.1000 146 232 1.5E-33 T 22-04-2016 IPR023214 HAD-like domain YE4034 ddb0c13c58e4f1900520d5323d3857ac 234 PANTHER PTHR10000:SF27 1 233 5.7E-37 T 22-04-2016 YE0828 5678f1c989520b200bbf10d6f404e2e3 162 Gene3D G3DSA:3.90.950.20 3 160 1.5E-60 T 22-04-2016 IPR008136 CinA, C-terminal YE0828 5678f1c989520b200bbf10d6f404e2e3 162 SUPERFAMILY SSF142433 5 159 1.01E-57 T 22-04-2016 IPR008136 CinA, C-terminal YE0828 5678f1c989520b200bbf10d6f404e2e3 162 Pfam PF02464 Competence-damaged protein 8 159 3.0E-58 T 22-04-2016 IPR008136 CinA, C-terminal YE0828 5678f1c989520b200bbf10d6f404e2e3 162 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 13 158 1.3E-55 T 22-04-2016 IPR008136 CinA, C-terminal YE0828 5678f1c989520b200bbf10d6f404e2e3 162 PANTHER PTHR13939 1 161 2.5E-76 T 22-04-2016 YE0095 0338a918dfd00cb9b9ff1fb32b0aebcb 144 Pfam PF05656 Protein of unknown function (DUF805) 7 132 4.2E-21 T 22-04-2016 IPR008523 Protein of unknown function DUF805 GO:0016021 YE0095 0338a918dfd00cb9b9ff1fb32b0aebcb 144 PANTHER PTHR34980 1 142 5.7E-46 T 22-04-2016 YE0095 0338a918dfd00cb9b9ff1fb32b0aebcb 144 PANTHER PTHR34980:SF1 1 142 5.7E-46 T 22-04-2016 YE2726 8ebd5f8f8858969cd3049f2588c7f381 300 SUPERFAMILY SSF46689 244 291 8.96E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE2726 8ebd5f8f8858969cd3049f2588c7f381 300 Gene3D G3DSA:1.10.10.60 244 291 7.8E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE2726 8ebd5f8f8858969cd3049f2588c7f381 300 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 259 274 2.3E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YE2726 8ebd5f8f8858969cd3049f2588c7f381 300 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 274 290 2.3E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YE2726 8ebd5f8f8858969cd3049f2588c7f381 300 PANTHER PTHR11019:SF123 169 298 1.1E-49 T 22-04-2016 YE2726 8ebd5f8f8858969cd3049f2588c7f381 300 PANTHER PTHR11019:SF123 116 152 1.1E-49 T 22-04-2016 YE2726 8ebd5f8f8858969cd3049f2588c7f381 300 PANTHER PTHR11019 169 298 1.1E-49 T 22-04-2016 YE2726 8ebd5f8f8858969cd3049f2588c7f381 300 PANTHER PTHR11019 116 152 1.1E-49 T 22-04-2016 YE2726 8ebd5f8f8858969cd3049f2588c7f381 300 Gene3D G3DSA:1.10.10.60 188 243 1.1E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE2726 8ebd5f8f8858969cd3049f2588c7f381 300 Pfam PF12833 Helix-turn-helix domain 214 290 6.4E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YE2726 8ebd5f8f8858969cd3049f2588c7f381 300 SMART SM00342 207 290 2.2E-34 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YE2726 8ebd5f8f8858969cd3049f2588c7f381 300 SUPERFAMILY SSF46689 190 241 1.22E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE2726 8ebd5f8f8858969cd3049f2588c7f381 300 Pfam PF10114 Sensory domain found in PocR 7 164 2.0E-42 T 22-04-2016 IPR018771 PocR domain UniPathway: UPA00148|UniPathway: UPA00621 YE1887 73c66ce6ad81de17f10f9db4bdeb71d7 253 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 6 253 6.2E-136 T 22-04-2016 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.12+1.1.1.127|MetaCyc: PWY-5515|MetaCyc: PWY-6507|MetaCyc: PWY-7562 YE1887 73c66ce6ad81de17f10f9db4bdeb71d7 253 SUPERFAMILY SSF51735 9 252 1.72E-77 T 22-04-2016 IPR016040 NAD(P)-binding domain YE1887 73c66ce6ad81de17f10f9db4bdeb71d7 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 4.8E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE1887 73c66ce6ad81de17f10f9db4bdeb71d7 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 4.8E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE1887 73c66ce6ad81de17f10f9db4bdeb71d7 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 4.8E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE1887 73c66ce6ad81de17f10f9db4bdeb71d7 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 4.8E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE1887 73c66ce6ad81de17f10f9db4bdeb71d7 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 4.8E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE1887 73c66ce6ad81de17f10f9db4bdeb71d7 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 4.8E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE1887 73c66ce6ad81de17f10f9db4bdeb71d7 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YE1887 73c66ce6ad81de17f10f9db4bdeb71d7 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 250 4.9E-58 T 22-04-2016 YE1887 73c66ce6ad81de17f10f9db4bdeb71d7 253 PANTHER PTHR24322 15 142 1.2E-65 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE1887 73c66ce6ad81de17f10f9db4bdeb71d7 253 PANTHER PTHR24322 158 190 1.2E-65 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE1887 73c66ce6ad81de17f10f9db4bdeb71d7 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 8.4E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE1887 73c66ce6ad81de17f10f9db4bdeb71d7 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 8.4E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE1887 73c66ce6ad81de17f10f9db4bdeb71d7 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 8.4E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE1887 73c66ce6ad81de17f10f9db4bdeb71d7 253 Gene3D G3DSA:3.40.50.720 6 252 1.8E-82 T 22-04-2016 IPR016040 NAD(P)-binding domain YE1887 73c66ce6ad81de17f10f9db4bdeb71d7 253 PANTHER PTHR24322:SF402 15 142 1.2E-65 T 22-04-2016 YE1887 73c66ce6ad81de17f10f9db4bdeb71d7 253 PANTHER PTHR24322:SF402 158 190 1.2E-65 T 22-04-2016 YE3577 b8ce90d9cba35c1a7a087637e1affc3b 459 Pfam PF03929 PepSY-associated TM region 18 388 1.7E-49 T 22-04-2016 IPR005625 PepSY-associated TM protein YE3577 b8ce90d9cba35c1a7a087637e1affc3b 459 PANTHER PTHR34219 7 443 7.0E-78 T 22-04-2016 YE3577 b8ce90d9cba35c1a7a087637e1affc3b 459 PANTHER PTHR34219:SF1 7 443 7.0E-78 T 22-04-2016 YE2029 e14cf2b805141e09b7b97c00492d3a26 491 Gene3D G3DSA:1.20.1250.20 35 211 4.5E-25 T 22-04-2016 YE2029 e14cf2b805141e09b7b97c00492d3a26 491 PANTHER PTHR23501:SF66 33 489 1.0E-121 T 22-04-2016 YE2029 e14cf2b805141e09b7b97c00492d3a26 491 Gene3D G3DSA:1.20.1250.20 291 484 7.4E-16 T 22-04-2016 YE2029 e14cf2b805141e09b7b97c00492d3a26 491 PANTHER PTHR23501 33 489 1.0E-121 T 22-04-2016 YE2029 e14cf2b805141e09b7b97c00492d3a26 491 SUPERFAMILY SSF103473 33 216 5.75E-56 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE2029 e14cf2b805141e09b7b97c00492d3a26 491 SUPERFAMILY SSF103473 266 477 5.75E-56 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE2029 e14cf2b805141e09b7b97c00492d3a26 491 Pfam PF07690 Major Facilitator Superfamily 38 427 2.4E-43 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YE1880 ea595aed9cbc30cf39885d294140402a 182 PIRSF PIRSF030780 1 182 1.5E-104 T 22-04-2016 IPR016956 Inner membrane protein YdjM YE1880 ea595aed9cbc30cf39885d294140402a 182 PANTHER PTHR35531:SF1 1 182 1.7E-64 T 22-04-2016 YE1880 ea595aed9cbc30cf39885d294140402a 182 PANTHER PTHR35531 1 182 1.7E-64 T 22-04-2016 YE1880 ea595aed9cbc30cf39885d294140402a 182 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 162 2.0E-35 T 22-04-2016 IPR007404 LexA-binding, inner membrane-associated putative hydrolase YE1530 bdfd0f7a3a816814c539da60475c03a9 382 SUPERFAMILY SSF103473 6 371 1.7E-42 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE1530 bdfd0f7a3a816814c539da60475c03a9 382 Pfam PF07690 Major Facilitator Superfamily 11 312 7.1E-21 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YE1530 bdfd0f7a3a816814c539da60475c03a9 382 PANTHER PTHR23521:SF1 2 381 1.0E-216 T 22-04-2016 YE1530 bdfd0f7a3a816814c539da60475c03a9 382 Gene3D G3DSA:1.20.1250.20 6 178 3.0E-16 T 22-04-2016 YE1530 bdfd0f7a3a816814c539da60475c03a9 382 Gene3D G3DSA:1.20.1250.20 199 375 5.8E-19 T 22-04-2016 YE1530 bdfd0f7a3a816814c539da60475c03a9 382 PANTHER PTHR23521 2 381 1.0E-216 T 22-04-2016 YE1530 bdfd0f7a3a816814c539da60475c03a9 382 Hamap MF_01149 Uncharacterized MFS-type transporter YcaD [ycaD]. 1 382 41.388 T 22-04-2016 IPR023745 MSF-type transporter, YcaD YE0726 4ec952c0fe131ab2e90728a66f904e8e 241 Pfam PF03749 Sugar fermentation stimulation protein 14 226 1.2E-76 T 22-04-2016 IPR005224 Sugar fermentation stimulation protein YE0726 4ec952c0fe131ab2e90728a66f904e8e 241 PANTHER PTHR30545 2 236 1.2E-90 T 22-04-2016 YE0726 4ec952c0fe131ab2e90728a66f904e8e 241 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 2 235 55.304 T 22-04-2016 IPR005224 Sugar fermentation stimulation protein YE0726 4ec952c0fe131ab2e90728a66f904e8e 241 PANTHER PTHR30545:SF2 2 236 1.2E-90 T 22-04-2016 YE0726 4ec952c0fe131ab2e90728a66f904e8e 241 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 6 231 2.9E-82 T 22-04-2016 IPR005224 Sugar fermentation stimulation protein YE1368 3e2b98871ad540ccf7faa0f159541e86 605 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 156 166 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YE1368 3e2b98871ad540ccf7faa0f159541e86 605 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 507 518 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YE1368 3e2b98871ad540ccf7faa0f159541e86 605 Pfam PF00920 Dehydratase family 69 600 1.1E-159 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YE1368 3e2b98871ad540ccf7faa0f159541e86 605 SUPERFAMILY SSF143975 3 420 3.01E-147 T 22-04-2016 YE1368 3e2b98871ad540ccf7faa0f159541e86 605 PANTHER PTHR21000 3 605 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 YE1368 3e2b98871ad540ccf7faa0f159541e86 605 PANTHER PTHR21000:SF9 3 605 0.0 T 22-04-2016 YE1368 3e2b98871ad540ccf7faa0f159541e86 605 SUPERFAMILY SSF52016 421 602 1.49E-58 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YE1368 3e2b98871ad540ccf7faa0f159541e86 605 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 5 603 0.0 T 22-04-2016 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12|UniPathway: UPA00226 YE3284 3c321b109ac281a87c97de4b2918f11e 241 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 22-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 YE3284 3c321b109ac281a87c97de4b2918f11e 241 SUPERFAMILY SSF52313 6 236 2.88E-97 T 22-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain YE3284 3c321b109ac281a87c97de4b2918f11e 241 Pfam PF00318 Ribosomal protein S2 9 224 7.3E-95 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3284 3c321b109ac281a87c97de4b2918f11e 241 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 2.1E-109 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 YE3284 3c321b109ac281a87c97de4b2918f11e 241 PANTHER PTHR12534 1 235 6.3E-126 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 YE3284 3c321b109ac281a87c97de4b2918f11e 241 PRINTS PR00395 Ribosomal protein S2 signature 6 24 2.2E-37 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3284 3c321b109ac281a87c97de4b2918f11e 241 PRINTS PR00395 Ribosomal protein S2 signature 175 186 2.2E-37 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3284 3c321b109ac281a87c97de4b2918f11e 241 PRINTS PR00395 Ribosomal protein S2 signature 196 210 2.2E-37 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3284 3c321b109ac281a87c97de4b2918f11e 241 PRINTS PR00395 Ribosomal protein S2 signature 87 104 2.2E-37 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3284 3c321b109ac281a87c97de4b2918f11e 241 PRINTS PR00395 Ribosomal protein S2 signature 37 46 2.2E-37 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3284 3c321b109ac281a87c97de4b2918f11e 241 PRINTS PR00395 Ribosomal protein S2 signature 158 175 2.2E-37 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3284 3c321b109ac281a87c97de4b2918f11e 241 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 22-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 YE3284 3c321b109ac281a87c97de4b2918f11e 241 Gene3D G3DSA:3.40.50.10490 158 236 3.4E-68 T 22-04-2016 YE3284 3c321b109ac281a87c97de4b2918f11e 241 Gene3D G3DSA:3.40.50.10490 23 99 3.4E-68 T 22-04-2016 YE3284 3c321b109ac281a87c97de4b2918f11e 241 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 41.968 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 YE3284 3c321b109ac281a87c97de4b2918f11e 241 Gene3D G3DSA:1.10.287.610 100 152 1.2E-26 T 22-04-2016 YE2110 ac058220d1bb1a35be8641eb688352f8 538 Gene3D G3DSA:3.40.190.10 154 305 9.0E-52 T 22-04-2016 YE2110 ac058220d1bb1a35be8641eb688352f8 538 PANTHER PTHR30290 9 538 0.0 T 22-04-2016 YE2110 ac058220d1bb1a35be8641eb688352f8 538 PANTHER PTHR30290:SF23 9 538 0.0 T 22-04-2016 YE2110 ac058220d1bb1a35be8641eb688352f8 538 SUPERFAMILY SSF53850 32 529 4.5E-140 T 22-04-2016 YE2110 ac058220d1bb1a35be8641eb688352f8 538 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 77 454 5.1E-86 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain YE2110 ac058220d1bb1a35be8641eb688352f8 538 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 83 104 - T 22-04-2016 IPR023765 Solute-binding protein family 5, conserved site YE2110 ac058220d1bb1a35be8641eb688352f8 538 Gene3D G3DSA:3.10.105.10 306 505 6.4E-64 T 22-04-2016 YE2110 ac058220d1bb1a35be8641eb688352f8 538 PIRSF PIRSF002741 3 537 6.2E-111 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 YE4011 4fa7cf3d5939188423cf6dfc0542c11e 428 Gene3D G3DSA:3.90.550.10 22 301 2.3E-78 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YE4011 4fa7cf3d5939188423cf6dfc0542c11e 428 Gene3D G3DSA:3.90.550.10 344 386 2.3E-78 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YE4011 4fa7cf3d5939188423cf6dfc0542c11e 428 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 21 397 1.6E-156 T 22-04-2016 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 YE4011 4fa7cf3d5939188423cf6dfc0542c11e 428 Pfam PF00483 Nucleotidyl transferase 22 291 3.6E-69 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 YE4011 4fa7cf3d5939188423cf6dfc0542c11e 428 SUPERFAMILY SSF53448 378 393 1.17E-78 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YE4011 4fa7cf3d5939188423cf6dfc0542c11e 428 SUPERFAMILY SSF53448 19 294 1.17E-78 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YE4011 4fa7cf3d5939188423cf6dfc0542c11e 428 PANTHER PTHR22572:SF10 21 398 1.3E-182 T 22-04-2016 YE4011 4fa7cf3d5939188423cf6dfc0542c11e 428 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 26 45 - T 22-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 YE4011 4fa7cf3d5939188423cf6dfc0542c11e 428 PANTHER PTHR22572 21 398 1.3E-182 T 22-04-2016 YE4011 4fa7cf3d5939188423cf6dfc0542c11e 428 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 17 423 53.23 T 22-04-2016 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 YE4011 4fa7cf3d5939188423cf6dfc0542c11e 428 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 211 221 - T 22-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 YE4011 4fa7cf3d5939188423cf6dfc0542c11e 428 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 113 121 - T 22-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 YE4011 4fa7cf3d5939188423cf6dfc0542c11e 428 SUPERFAMILY SSF51161 313 413 4.08E-19 T 22-04-2016 IPR011004 Trimeric LpxA-like YE0800 ffb28a873c38de66d13691a5d0ff78e1 443 SUPERFAMILY SSF53686 82 438 2.06E-53 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YE0800 ffb28a873c38de66d13691a5d0ff78e1 443 PANTHER PTHR10314 10 131 2.8E-209 T 22-04-2016 YE0800 ffb28a873c38de66d13691a5d0ff78e1 443 PANTHER PTHR10314 155 439 2.8E-209 T 22-04-2016 YE0800 ffb28a873c38de66d13691a5d0ff78e1 443 Gene3D G3DSA:3.40.50.1100 180 438 1.1E-41 T 22-04-2016 YE0800 ffb28a873c38de66d13691a5d0ff78e1 443 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 90 399 2.2E-51 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YE0800 ffb28a873c38de66d13691a5d0ff78e1 443 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 108 122 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 YE0800 ffb28a873c38de66d13691a5d0ff78e1 443 Hamap MF_01030 D-serine dehydratase [dsdA]. 1 443 275.537 T 22-04-2016 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 YE0800 ffb28a873c38de66d13691a5d0ff78e1 443 PANTHER PTHR10314:SF9 10 131 2.8E-209 T 22-04-2016 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 YE0800 ffb28a873c38de66d13691a5d0ff78e1 443 PANTHER PTHR10314:SF9 155 439 2.8E-209 T 22-04-2016 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 YE0800 ffb28a873c38de66d13691a5d0ff78e1 443 TIGRFAM TIGR02035 D_Ser_am_lyase: D-serine ammonia-lyase 10 438 1.9E-224 T 22-04-2016 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 YE4072A 7a47769ba42b342aa2c198863ae9266c 375 SUPERFAMILY SSF48208 3 357 3.2E-105 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 YE4072A 7a47769ba42b342aa2c198863ae9266c 375 Gene3D G3DSA:1.50.10.10 5 361 1.1E-97 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 YE4072A 7a47769ba42b342aa2c198863ae9266c 375 Pfam PF01270 Glycosyl hydrolases family 8 10 353 9.8E-96 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 YE4072A 7a47769ba42b342aa2c198863ae9266c 375 ProSitePatterns PS00812 Glycosyl hydrolases family 8 signature. 115 133 - T 22-04-2016 IPR019834 Glycoside hydrolase, family 8, conserved site KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 YE4072A 7a47769ba42b342aa2c198863ae9266c 375 PRINTS PR00735 Glycosyl hydrolase family 8 signature 338 352 3.8E-21 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 YE4072A 7a47769ba42b342aa2c198863ae9266c 375 PRINTS PR00735 Glycosyl hydrolase family 8 signature 216 227 3.8E-21 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 YE4072A 7a47769ba42b342aa2c198863ae9266c 375 PRINTS PR00735 Glycosyl hydrolase family 8 signature 53 66 3.8E-21 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 YE4072A 7a47769ba42b342aa2c198863ae9266c 375 PRINTS PR00735 Glycosyl hydrolase family 8 signature 241 250 3.8E-21 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 YE4072A 7a47769ba42b342aa2c198863ae9266c 375 PRINTS PR00735 Glycosyl hydrolase family 8 signature 115 133 3.8E-21 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 YE4072A 7a47769ba42b342aa2c198863ae9266c 375 PRINTS PR00735 Glycosyl hydrolase family 8 signature 180 197 3.8E-21 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 YE2180 662d0fafdd97349e4f0fae6ad60263f9 676 PANTHER PTHR32552 11 676 3.2E-225 T 22-04-2016 YE2180 662d0fafdd97349e4f0fae6ad60263f9 676 PANTHER PTHR32552:SF22 11 676 3.2E-225 T 22-04-2016 YE2180 662d0fafdd97349e4f0fae6ad60263f9 676 Gene3D G3DSA:2.40.170.20 151 675 4.6E-66 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YE2180 662d0fafdd97349e4f0fae6ad60263f9 676 Gene3D G3DSA:2.170.130.10 33 150 6.7E-30 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YE2180 662d0fafdd97349e4f0fae6ad60263f9 676 SUPERFAMILY SSF56935 33 676 2.44E-90 T 22-04-2016 YE2180 662d0fafdd97349e4f0fae6ad60263f9 676 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 34 676 6.5E-113 T 22-04-2016 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 YE2180 662d0fafdd97349e4f0fae6ad60263f9 676 Pfam PF00593 TonB dependent receptor 420 674 2.1E-23 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YE2180 662d0fafdd97349e4f0fae6ad60263f9 676 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 150 9.5E-22 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YE2180 662d0fafdd97349e4f0fae6ad60263f9 676 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 33 676 1.2E-141 T 22-04-2016 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 YE0075 1a802f80825eb3c19bd1222abeafcc44 341 Pfam PF04748 Divergent polysaccharide deacetylase 28 238 4.2E-78 T 22-04-2016 IPR006837 Protein of unknown function DUF610, YibQ YE0075 1a802f80825eb3c19bd1222abeafcc44 341 PANTHER PTHR30105 9 255 1.7E-93 T 22-04-2016 YE0075 1a802f80825eb3c19bd1222abeafcc44 341 Gene3D G3DSA:3.20.20.370 15 244 4.4E-108 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 YE0075 1a802f80825eb3c19bd1222abeafcc44 341 SUPERFAMILY SSF88713 24 238 1.07E-72 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 YE4157 415c1834cfe33c62bb4e9f7eed86b1ee 214 SUPERFAMILY SSF46785 16 194 1.26E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE4157 415c1834cfe33c62bb4e9f7eed86b1ee 214 PANTHER PTHR30363:SF9 7 212 5.5E-94 T 22-04-2016 YE4157 415c1834cfe33c62bb4e9f7eed86b1ee 214 PANTHER PTHR30363 7 212 5.5E-94 T 22-04-2016 YE4157 415c1834cfe33c62bb4e9f7eed86b1ee 214 Gene3D G3DSA:1.10.10.10 16 112 1.9E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2536 118b90fc54210cd23670d6020f90000b 103 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 3 102 2.4E-26 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 YE2536 118b90fc54210cd23670d6020f90000b 103 Pfam PF02049 Flagellar hook-basal body complex protein FliE 19 103 3.5E-27 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 YE2536 118b90fc54210cd23670d6020f90000b 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 88 101 5.7E-17 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 YE2536 118b90fc54210cd23670d6020f90000b 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 67 83 5.7E-17 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 YE2536 118b90fc54210cd23670d6020f90000b 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 32 48 5.7E-17 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 YE2536 118b90fc54210cd23670d6020f90000b 103 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 4 103 18.077 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 YE2536 118b90fc54210cd23670d6020f90000b 103 PANTHER PTHR34653 1 103 2.8E-28 T 22-04-2016 YE1042 dd909f0038af7586075662f4f5c3aaf5 295 Gene3D G3DSA:3.20.20.140 6 293 1.7E-107 T 22-04-2016 YE1042 dd909f0038af7586075662f4f5c3aaf5 295 Pfam PF02126 Phosphotriesterase family 4 290 7.5E-107 T 22-04-2016 IPR001559 Phosphotriesterase GO:0008270|GO:0009056 YE1042 dd909f0038af7586075662f4f5c3aaf5 295 PANTHER PTHR10819 6 294 2.2E-101 T 22-04-2016 IPR001559 Phosphotriesterase GO:0008270|GO:0009056 YE1042 dd909f0038af7586075662f4f5c3aaf5 295 PIRSF PIRSF016839 1 295 1.6E-123 T 22-04-2016 YE1042 dd909f0038af7586075662f4f5c3aaf5 295 SUPERFAMILY SSF51556 6 290 4.3E-93 T 22-04-2016 IPR032466 Metal-dependent hydrolase YE3198 8582bb4c012cc3565b5a702a6870ace8 440 PANTHER PTHR32092:SF7 1 437 2.6E-258 T 22-04-2016 YE3198 8582bb4c012cc3565b5a702a6870ace8 440 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 195 415 1.7E-51 T 22-04-2016 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 YE3198 8582bb4c012cc3565b5a702a6870ace8 440 SUPERFAMILY SSF51735 4 164 1.09E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3198 8582bb4c012cc3565b5a702a6870ace8 440 PANTHER PTHR32092 1 437 2.6E-258 T 22-04-2016 YE3198 8582bb4c012cc3565b5a702a6870ace8 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 5 20 2.4E-48 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 YE3198 8582bb4c012cc3565b5a702a6870ace8 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 109 129 2.4E-48 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 YE3198 8582bb4c012cc3565b5a702a6870ace8 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 74 90 2.4E-48 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 YE3198 8582bb4c012cc3565b5a702a6870ace8 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 191 203 2.4E-48 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 YE3198 8582bb4c012cc3565b5a702a6870ace8 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 95 108 2.4E-48 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 YE3198 8582bb4c012cc3565b5a702a6870ace8 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 138 155 2.4E-48 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 YE3198 8582bb4c012cc3565b5a702a6870ace8 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 164 175 2.4E-48 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 YE3198 8582bb4c012cc3565b5a702a6870ace8 440 Gene3D G3DSA:3.40.50.720 1 165 2.0E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3198 8582bb4c012cc3565b5a702a6870ace8 440 SUPERFAMILY SSF56327 168 437 7.84E-87 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 YE3198 8582bb4c012cc3565b5a702a6870ace8 440 Gene3D G3DSA:3.90.110.10 167 437 4.7E-97 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 YE3198 8582bb4c012cc3565b5a702a6870ace8 440 Pfam PF02056 Family 4 glycosyl hydrolase 6 184 9.2E-61 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 YE3014 2679a0e3926e014baea9672946fd615f 203 SMART SM00421 143 200 8.0E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE3014 2679a0e3926e014baea9672946fd615f 203 Gene3D G3DSA:1.10.10.10 141 201 3.1E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3014 2679a0e3926e014baea9672946fd615f 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 146 160 1.7E-5 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE3014 2679a0e3926e014baea9672946fd615f 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 176 1.7E-5 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE3014 2679a0e3926e014baea9672946fd615f 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 188 1.7E-5 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE3014 2679a0e3926e014baea9672946fd615f 203 Pfam PF00196 Bacterial regulatory proteins, luxR family 145 199 3.6E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE3014 2679a0e3926e014baea9672946fd615f 203 SUPERFAMILY SSF46894 139 200 4.42E-13 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YE0779 3a4ba7cf4589ee4ff38c0351f8ec8a61 174 PANTHER PTHR33420 4 174 4.8E-51 T 22-04-2016 YE0779 3a4ba7cf4589ee4ff38c0351f8ec8a61 174 PANTHER PTHR33420:SF7 4 174 4.8E-51 T 22-04-2016 YE0779 3a4ba7cf4589ee4ff38c0351f8ec8a61 174 Gene3D G3DSA:2.60.40.1090 28 174 6.3E-46 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YE0779 3a4ba7cf4589ee4ff38c0351f8ec8a61 174 Pfam PF00419 Fimbrial protein 31 174 1.6E-15 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YE0779 3a4ba7cf4589ee4ff38c0351f8ec8a61 174 SUPERFAMILY SSF49401 29 174 1.89E-38 T 22-04-2016 IPR008966 Adhesion domain YE1160 dcd78bce5d0aeba9ec2c76b5e1532c6f 95 SUPERFAMILY SSF143011 1 82 1.14E-20 T 22-04-2016 YE1160 dcd78bce5d0aeba9ec2c76b5e1532c6f 95 PANTHER PTHR35601:SF2 1 95 6.2E-39 T 22-04-2016 YE1160 dcd78bce5d0aeba9ec2c76b5e1532c6f 95 PANTHER PTHR35601 1 95 6.2E-39 T 22-04-2016 YE1160 dcd78bce5d0aeba9ec2c76b5e1532c6f 95 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 83 6.3E-12 T 22-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family YE3907 9c9c08750d71fedab94e7b0fcd94eebe 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 6.5E-46 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3907 9c9c08750d71fedab94e7b0fcd94eebe 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 26.133 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3907 9c9c08750d71fedab94e7b0fcd94eebe 117 Gene3D G3DSA:3.30.420.100 24 117 9.8E-37 T 22-04-2016 YE3907 9c9c08750d71fedab94e7b0fcd94eebe 117 SUPERFAMILY SSF53137 3 115 4.14E-53 T 22-04-2016 YE3907 9c9c08750d71fedab94e7b0fcd94eebe 117 PANTHER PTHR12899 1 117 1.3E-48 T 22-04-2016 YE3907 9c9c08750d71fedab94e7b0fcd94eebe 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 1.0E-43 T 22-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0784 d379ee71f74558c7cd77df5dfff7d691 164 Gene3D G3DSA:2.60.40.1090 28 164 1.0E-8 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YE0784 d379ee71f74558c7cd77df5dfff7d691 164 SUPERFAMILY SSF49401 37 164 3.48E-21 T 22-04-2016 IPR008966 Adhesion domain YE0784 d379ee71f74558c7cd77df5dfff7d691 164 Pfam PF00419 Fimbrial protein 29 164 6.8E-21 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YE4175 9240acf8a3d6a0bb107ba66b40cbdf89 46 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 30 1.0E-10 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE4175 9240acf8a3d6a0bb107ba66b40cbdf89 46 Pfam PF00468 Ribosomal protein L34 1 44 3.7E-23 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE4175 9240acf8a3d6a0bb107ba66b40cbdf89 46 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 22-04-2016 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE4175 9240acf8a3d6a0bb107ba66b40cbdf89 46 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 3.9E-26 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE4175 9240acf8a3d6a0bb107ba66b40cbdf89 46 PANTHER PTHR14503 1 46 8.9E-24 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE4175 9240acf8a3d6a0bb107ba66b40cbdf89 46 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.553 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0661 8d12a48570bd8eec7219d82ded696390 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 50 1.7E-18 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE0661 8d12a48570bd8eec7219d82ded696390 334 Gene3D G3DSA:3.40.50.2300 173 331 1.4E-35 T 22-04-2016 YE0661 8d12a48570bd8eec7219d82ded696390 334 Gene3D G3DSA:3.40.50.2300 56 172 8.3E-32 T 22-04-2016 YE0661 8d12a48570bd8eec7219d82ded696390 334 SUPERFAMILY SSF53822 60 314 1.39E-40 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YE0661 8d12a48570bd8eec7219d82ded696390 334 SUPERFAMILY SSF47413 2 58 2.31E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE0661 8d12a48570bd8eec7219d82ded696390 334 PANTHER PTHR30146:SF25 1 333 8.1E-230 T 22-04-2016 YE0661 8d12a48570bd8eec7219d82ded696390 334 PANTHER PTHR30146 1 333 8.1E-230 T 22-04-2016 YE0661 8d12a48570bd8eec7219d82ded696390 334 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 2 328 3.3E-150 T 22-04-2016 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 YE0661 8d12a48570bd8eec7219d82ded696390 334 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 62 304 1.1E-14 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain YE0661 8d12a48570bd8eec7219d82ded696390 334 SMART SM00354 1 73 2.9E-31 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE0661 8d12a48570bd8eec7219d82ded696390 334 Gene3D G3DSA:1.10.260.40 1 55 2.4E-24 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE3496A 5fd3e26f8e8e67bfce333a2baae9807b 118 SMART SM00530 5 64 8.3E-11 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YE3496A 5fd3e26f8e8e67bfce333a2baae9807b 118 Pfam PF01381 Helix-turn-helix 6 64 1.9E-9 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YE3496A 5fd3e26f8e8e67bfce333a2baae9807b 118 Gene3D G3DSA:1.10.260.40 3 69 2.2E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE3496A 5fd3e26f8e8e67bfce333a2baae9807b 118 SUPERFAMILY SSF47413 4 68 9.57E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE4019 69543380f1eb48918fc2f253955b04df 194 PANTHER PTHR33508:SF4 1 192 5.6E-94 T 22-04-2016 YE4019 69543380f1eb48918fc2f253955b04df 194 PANTHER PTHR33508 1 192 5.6E-94 T 22-04-2016 YE4019 69543380f1eb48918fc2f253955b04df 194 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 2 188 7.9E-31 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 YE4019 69543380f1eb48918fc2f253955b04df 194 Pfam PF01914 MarC family integral membrane protein 2 190 3.3E-58 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 YE0078 d7db49f25a916676463ff7b8065d885f 144 PANTHER PTHR12231 40 144 2.1E-50 T 22-04-2016 YE0078 d7db49f25a916676463ff7b8065d885f 144 Gene3D G3DSA:3.40.250.10 23 143 2.1E-27 T 22-04-2016 IPR001763 Rhodanese-like domain YE0078 d7db49f25a916676463ff7b8065d885f 144 SUPERFAMILY SSF52821 16 143 1.31E-30 T 22-04-2016 IPR001763 Rhodanese-like domain YE0078 d7db49f25a916676463ff7b8065d885f 144 Pfam PF00581 Rhodanese-like domain 44 134 3.5E-17 T 22-04-2016 IPR001763 Rhodanese-like domain YE0078 d7db49f25a916676463ff7b8065d885f 144 PANTHER PTHR12231:SF138 40 144 2.1E-50 T 22-04-2016 YE0078 d7db49f25a916676463ff7b8065d885f 144 SMART SM00450 41 139 2.8E-20 T 22-04-2016 IPR001763 Rhodanese-like domain YE1373 9f52bc67d37325771eb97c9ef74317ce 452 PANTHER PTHR11236 15 442 6.5E-133 T 22-04-2016 YE1373 9f52bc67d37325771eb97c9ef74317ce 452 SUPERFAMILY SSF56322 24 442 1.57E-97 T 22-04-2016 IPR005801 ADC synthase GO:0009058 YE1373 9f52bc67d37325771eb97c9ef74317ce 452 Pfam PF00425 chorismate binding enzyme 185 434 5.4E-63 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal YE1373 9f52bc67d37325771eb97c9ef74317ce 452 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 94 441 3.0E-103 T 22-04-2016 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 YE1373 9f52bc67d37325771eb97c9ef74317ce 452 PANTHER PTHR11236:SF3 15 442 6.5E-133 T 22-04-2016 YE1373 9f52bc67d37325771eb97c9ef74317ce 452 Hamap MF_01935 Isochorismate synthase MenF [menF]. 7 444 41.652 T 22-04-2016 YE1373 9f52bc67d37325771eb97c9ef74317ce 452 Gene3D G3DSA:3.60.120.10 34 442 2.0E-83 T 22-04-2016 IPR005801 ADC synthase GO:0009058 YE3114 fd43ec5d9648c0147ceb426a614067f0 122 Pfam PF10757 Biofilm formation regulator YbaJ 1 118 3.0E-62 T 22-04-2016 IPR019693 Biofilm formation regulator YbaJ YE2126 a27efa77678ff266b048be1892b02339 321 PANTHER PTHR30465:SF65 1 147 6.7E-191 T 22-04-2016 YE2126 a27efa77678ff266b048be1892b02339 321 PANTHER PTHR30465:SF65 172 315 6.7E-191 T 22-04-2016 YE2126 a27efa77678ff266b048be1892b02339 321 PANTHER PTHR30465 1 147 6.7E-191 T 22-04-2016 YE2126 a27efa77678ff266b048be1892b02339 321 PANTHER PTHR30465 172 315 6.7E-191 T 22-04-2016 YE2126 a27efa77678ff266b048be1892b02339 321 Gene3D G3DSA:1.10.3720.10 181 306 2.3E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE2126 a27efa77678ff266b048be1892b02339 321 Gene3D G3DSA:1.10.3720.10 68 141 2.3E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE2126 a27efa77678ff266b048be1892b02339 321 SUPERFAMILY SSF161098 69 138 2.22E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE2126 a27efa77678ff266b048be1892b02339 321 SUPERFAMILY SSF161098 178 300 2.22E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE2126 a27efa77678ff266b048be1892b02339 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 311 4.7E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE0961 57566b53a63598a41c0817d86948ca90 391 PRINTS PR00169 Potassium channel signature 195 221 2.7E-5 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 YE0961 57566b53a63598a41c0817d86948ca90 391 PRINTS PR00169 Potassium channel signature 166 188 2.7E-5 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 YE0961 57566b53a63598a41c0817d86948ca90 391 PRINTS PR00169 Potassium channel signature 49 69 2.7E-5 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 YE0961 57566b53a63598a41c0817d86948ca90 391 PANTHER PTHR16254:SF27 150 388 1.6E-99 T 22-04-2016 YE0961 57566b53a63598a41c0817d86948ca90 391 SUPERFAMILY SSF81324 118 263 9.42E-18 T 22-04-2016 YE0961 57566b53a63598a41c0817d86948ca90 391 Gene3D G3DSA:3.40.50.720 239 376 5.4E-25 T 22-04-2016 IPR016040 NAD(P)-binding domain YE0961 57566b53a63598a41c0817d86948ca90 391 Gene3D G3DSA:1.10.287.70 138 222 2.7E-14 T 22-04-2016 YE0961 57566b53a63598a41c0817d86948ca90 391 PANTHER PTHR16254 150 388 1.6E-99 T 22-04-2016 YE0961 57566b53a63598a41c0817d86948ca90 391 Pfam PF07885 Ion channel 148 218 1.3E-11 T 22-04-2016 IPR013099 Potassium channel domain YE0961 57566b53a63598a41c0817d86948ca90 391 Pfam PF02254 TrkA-N domain 243 356 1.3E-14 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 YE0961 57566b53a63598a41c0817d86948ca90 391 SUPERFAMILY SSF51735 239 376 4.04E-20 T 22-04-2016 IPR016040 NAD(P)-binding domain YE1410 eed9e17ac6cf4dbe247fc4953b53c4f0 159 Pfam PF06530 Phage antitermination protein Q 20 140 4.5E-41 T 22-04-2016 IPR010534 Bacteriophage 933W, GpQ GO:0003677|GO:0060567 YE3582 5431db18fc1c39fff897b0966f8c81fd 261 Pfam PF00557 Metallopeptidase family M24 14 242 1.3E-51 T 22-04-2016 IPR000994 Peptidase M24, structural domain YE3582 5431db18fc1c39fff897b0966f8c81fd 261 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 168 186 - T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 YE3582 5431db18fc1c39fff897b0966f8c81fd 261 Gene3D G3DSA:3.90.230.10 5 254 3.8E-92 T 22-04-2016 IPR000994 Peptidase M24, structural domain YE3582 5431db18fc1c39fff897b0966f8c81fd 261 SUPERFAMILY SSF55920 6 255 1.03E-88 T 22-04-2016 IPR000994 Peptidase M24, structural domain YE3582 5431db18fc1c39fff897b0966f8c81fd 261 PANTHER PTHR10804:SF75 4 249 3.4E-134 T 22-04-2016 YE3582 5431db18fc1c39fff897b0966f8c81fd 261 PANTHER PTHR10804 4 249 3.4E-134 T 22-04-2016 YE3582 5431db18fc1c39fff897b0966f8c81fd 261 PRINTS PR00599 Methionine aminopeptidase-1 signature 193 205 4.7E-22 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase YE3582 5431db18fc1c39fff897b0966f8c81fd 261 PRINTS PR00599 Methionine aminopeptidase-1 signature 92 108 4.7E-22 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase YE3582 5431db18fc1c39fff897b0966f8c81fd 261 PRINTS PR00599 Methionine aminopeptidase-1 signature 162 174 4.7E-22 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase YE3582 5431db18fc1c39fff897b0966f8c81fd 261 PRINTS PR00599 Methionine aminopeptidase-1 signature 70 83 4.7E-22 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase YE3582 5431db18fc1c39fff897b0966f8c81fd 261 Hamap MF_01974 Methionine aminopeptidase [map]. 4 251 39.248 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 YE3582 5431db18fc1c39fff897b0966f8c81fd 261 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 5 249 5.2E-90 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 YE3888 7180d56ba361f287054cde2870c39fe8 373 PANTHER PTHR32039 26 373 8.5E-129 T 22-04-2016 YE3888 7180d56ba361f287054cde2870c39fe8 373 Gene3D G3DSA:3.40.50.450 108 253 2.5E-10 T 22-04-2016 YE3888 7180d56ba361f287054cde2870c39fe8 373 PANTHER PTHR32039:SF8 26 373 8.5E-129 T 22-04-2016 YE3888 7180d56ba361f287054cde2870c39fe8 373 Pfam PF02481 DNA recombination-mediator protein A 70 273 8.4E-75 T 22-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 YE3888 7180d56ba361f287054cde2870c39fe8 373 SUPERFAMILY SSF102405 77 282 4.43E-41 T 22-04-2016 YE3888 7180d56ba361f287054cde2870c39fe8 373 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 66 282 4.7E-81 T 22-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 YE1273 3e3c93aacad4343ad664948178b3ff7e 87 SUPERFAMILY SSF89447 10 75 1.1E-8 T 22-04-2016 YE1273 3e3c93aacad4343ad664948178b3ff7e 87 Gene3D G3DSA:2.10.260.10 6 84 2.7E-15 T 22-04-2016 YE0393 e630c7914340f892f4d5e0b221312e78 106 Pfam PF00436 Single-strand binding protein family 5 88 2.7E-13 T 22-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 YE0393 e630c7914340f892f4d5e0b221312e78 106 SUPERFAMILY SSF50249 3 105 6.51E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE0393 e630c7914340f892f4d5e0b221312e78 106 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 5 102 1.4E-37 T 22-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 YE0393 e630c7914340f892f4d5e0b221312e78 106 PIRSF PIRSF003135 1 103 1.8E-51 T 22-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 YE0393 e630c7914340f892f4d5e0b221312e78 106 Gene3D G3DSA:2.40.50.140 3 105 2.0E-44 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE0393 e630c7914340f892f4d5e0b221312e78 106 Hamap MF_00720 Primosomal replication protein n [priB]. 3 102 30.31 T 22-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 YE3105 119efbd3a04fe5f9757c171bff9843cc 121 Pfam PF10941 Protein of unknown function DUF2620 3 115 3.5E-41 T 22-04-2016 IPR021238 Protein of unknown function DUF2620 YE1822 ca99eaac8a5dc53ac5b463b63f24a641 95 Gene3D G3DSA:1.10.10.60 20 91 1.5E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE1822 ca99eaac8a5dc53ac5b463b63f24a641 95 PANTHER PTHR33609:SF1 9 94 2.2E-51 T 22-04-2016 YE1822 ca99eaac8a5dc53ac5b463b63f24a641 95 SUPERFAMILY SSF46689 8 80 3.76E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE1822 ca99eaac8a5dc53ac5b463b63f24a641 95 PANTHER PTHR33609 9 94 2.2E-51 T 22-04-2016 YE1822 ca99eaac8a5dc53ac5b463b63f24a641 95 Pfam PF01527 Transposase 9 78 3.7E-20 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 YE2994 8f63cb2146758b85d42e897947e14c0f 242 PIRSF PIRSF039085 1 242 4.9E-105 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 YE2994 8f63cb2146758b85d42e897947e14c0f 242 PANTHER PTHR24220 4 241 6.5E-192 T 22-04-2016 YE2994 8f63cb2146758b85d42e897947e14c0f 242 Pfam PF00005 ABC transporter 19 166 1.6E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE2994 8f63cb2146758b85d42e897947e14c0f 242 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE2994 8f63cb2146758b85d42e897947e14c0f 242 SMART SM00382 27 214 5.3E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain YE2994 8f63cb2146758b85d42e897947e14c0f 242 SUPERFAMILY SSF52540 2 236 5.2E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2994 8f63cb2146758b85d42e897947e14c0f 242 PANTHER PTHR24220:SF317 4 241 6.5E-192 T 22-04-2016 IPR030206 Glutamate/aspartate transport ATP-binding protein GltL/AatP GO:0005524|GO:0006865|GO:0043190 YE2994 8f63cb2146758b85d42e897947e14c0f 242 Gene3D G3DSA:3.40.50.300 2 237 4.5E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0752 90f0d6ef07cb30c8f283de9aa347a879 174 PANTHER PTHR10003 16 174 8.8E-45 T 22-04-2016 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone MetaCyc: PWY-6854 YE0752 90f0d6ef07cb30c8f283de9aa347a879 174 SUPERFAMILY SSF49329 23 174 2.23E-49 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YE0752 90f0d6ef07cb30c8f283de9aa347a879 174 PANTHER PTHR10003:SF40 16 174 8.8E-45 T 22-04-2016 YE0752 90f0d6ef07cb30c8f283de9aa347a879 174 Gene3D G3DSA:2.60.40.200 22 174 4.5E-48 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YE0752 90f0d6ef07cb30c8f283de9aa347a879 174 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 162 173 - T 22-04-2016 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854 YE0752 90f0d6ef07cb30c8f283de9aa347a879 174 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 33 173 2.6E-30 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 YE0752 90f0d6ef07cb30c8f283de9aa347a879 174 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 65 75 - T 22-04-2016 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854 YE1097 afdadfc2e870d12131fb129bf45b0525 341 TIGRFAM TIGR00825 EIIBC-GUT: PTS system, glucitol/sorbitol-specific, IIBC component 5 341 3.2E-179 T 22-04-2016 IPR004702 Phosphotransferease, sorbitol phosphotransferase enzyme II GO:0008982|GO:0009401|GO:0016021 YE1097 afdadfc2e870d12131fb129bf45b0525 341 Pfam PF07663 Sorbitol phosphotransferase enzyme II C-terminus 248 340 6.4E-42 T 22-04-2016 IPR011638 Sorbitol phosphotransferase enzyme II, C-terminal GO:0008982|GO:0009401|GO:0016021 YE1097 afdadfc2e870d12131fb129bf45b0525 341 PANTHER PTHR39427 141 341 2.3E-115 T 22-04-2016 YE1097 afdadfc2e870d12131fb129bf45b0525 341 PANTHER PTHR39427 1 125 2.3E-115 T 22-04-2016 YE1097 afdadfc2e870d12131fb129bf45b0525 341 Pfam PF03612 Sorbitol phosphotransferase enzyme II N-terminus 5 193 2.3E-71 T 22-04-2016 IPR011618 Sorbitol phosphotransferase enzyme II, N-terminal GO:0008982|GO:0009401|GO:0016021 YE2750 73ec77a040f0ae3ad0df8210cbcadf98 286 PANTHER PTHR20861:SF5 28 286 7.2E-75 T 22-04-2016 YE2750 73ec77a040f0ae3ad0df8210cbcadf98 286 Gene3D G3DSA:3.30.230.10 44 115 2.2E-11 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YE2750 73ec77a040f0ae3ad0df8210cbcadf98 286 PIRSF PIRSF033887 1 281 3.2E-64 T 22-04-2016 IPR012363 Propanediol utilisation/coumermycin biosynthesis, PduX-related KEGG: 00040+2.7.1.17|KEGG: 00860+2.7.1.177|MetaCyc: PWY-5443|UniPathway: UPA00148 YE2750 73ec77a040f0ae3ad0df8210cbcadf98 286 SUPERFAMILY SSF54211 2 144 8.35E-21 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YE2750 73ec77a040f0ae3ad0df8210cbcadf98 286 Pfam PF00288 GHMP kinases N terminal domain 72 114 3.2E-8 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 YE2750 73ec77a040f0ae3ad0df8210cbcadf98 286 PANTHER PTHR20861 28 286 7.2E-75 T 22-04-2016 YE2586 cdfb06e38b2dbc9b8ebdf68a3caea9a7 236 PANTHER PTHR33778 1 235 2.8E-123 T 22-04-2016 YE2586 cdfb06e38b2dbc9b8ebdf68a3caea9a7 236 PANTHER PTHR33778:SF3 1 235 2.8E-123 T 22-04-2016 YE2586 cdfb06e38b2dbc9b8ebdf68a3caea9a7 236 Pfam PF02308 MgtC family 14 133 1.5E-38 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 YE2586 cdfb06e38b2dbc9b8ebdf68a3caea9a7 236 PRINTS PR01837 MgtC/SapB protein signature 17 36 4.5E-47 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 YE2586 cdfb06e38b2dbc9b8ebdf68a3caea9a7 236 PRINTS PR01837 MgtC/SapB protein signature 61 83 4.5E-47 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 YE2586 cdfb06e38b2dbc9b8ebdf68a3caea9a7 236 PRINTS PR01837 MgtC/SapB protein signature 88 112 4.5E-47 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 YE2586 cdfb06e38b2dbc9b8ebdf68a3caea9a7 236 PRINTS PR01837 MgtC/SapB protein signature 36 54 4.5E-47 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 YE0814 3b0c8098e39028ce35c9d483af15749e 140 SUPERFAMILY SSF53062 1 131 6.93E-30 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 YE0814 3b0c8098e39028ce35c9d483af15749e 140 Gene3D G3DSA:3.40.50.510 1 137 8.1E-36 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 YE0814 3b0c8098e39028ce35c9d483af15749e 140 TIGRFAM TIGR00824 EIIA-man: PTS system, mannose/fructose/sorbose family, IIA component 1 113 8.6E-37 T 22-04-2016 IPR013789 Phosphotransferase system, mannose family IIA component GO:0005737|GO:0008643|GO:0016773 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YE0814 3b0c8098e39028ce35c9d483af15749e 140 PANTHER PTHR33799 2 130 3.8E-31 T 22-04-2016 YE0814 3b0c8098e39028ce35c9d483af15749e 140 Pfam PF03610 PTS system fructose IIA component 4 113 3.7E-16 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 YE3039 5074c8277efae0982056b7fc1da6da05 319 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 54 317 5.8E-37 T 22-04-2016 IPR018707 Protein of unknown function DUF2219 YE3039 5074c8277efae0982056b7fc1da6da05 319 Gene3D G3DSA:2.40.128.140 15 318 8.0E-63 T 22-04-2016 YE0629 8dbdadb39708826e5b6e61f53c7a3d6a 125 Gene3D G3DSA:2.60.40.1470 6 125 3.2E-45 T 22-04-2016 IPR007474 ApaG domain YE0629 8dbdadb39708826e5b6e61f53c7a3d6a 125 Pfam PF04379 Protein of unknown function (DUF525) 18 102 9.9E-34 T 22-04-2016 IPR007474 ApaG domain YE0629 8dbdadb39708826e5b6e61f53c7a3d6a 125 SUPERFAMILY SSF110069 5 125 3.4E-47 T 22-04-2016 IPR007474 ApaG domain YE0629 8dbdadb39708826e5b6e61f53c7a3d6a 125 PANTHER PTHR14289 3 122 1.2E-60 T 22-04-2016 YE0629 8dbdadb39708826e5b6e61f53c7a3d6a 125 Hamap MF_00791 Protein ApaG [apaG]. 1 125 31.663 T 22-04-2016 IPR023065 Uncharacterised protein family ApaG YE0896 b5554cdd5020ec8273f668c270273cfd 238 SUPERFAMILY SSF53901 34 160 2.3E-5 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YE0896 b5554cdd5020ec8273f668c270273cfd 238 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 23 237 2.7E-67 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal YE1414 907685086596e4a421bfafa5bacbce3c 397 PANTHER PTHR35404 2 397 1.1E-70 T 22-04-2016 YE1414 907685086596e4a421bfafa5bacbce3c 397 Pfam PF01609 Transposase DDE domain 104 323 6.7E-19 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 YE1414 907685086596e4a421bfafa5bacbce3c 397 SUPERFAMILY SSF53098 19 371 9.86E-38 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE1162 ae5a1b8e4d0d9c4bbfebaf25fb62f6a6 759 PANTHER PTHR23406 31 442 5.4E-170 T 22-04-2016 YE1162 ae5a1b8e4d0d9c4bbfebaf25fb62f6a6 759 Pfam PF03949 Malic enzyme, NAD binding domain 165 359 3.9E-17 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 YE1162 ae5a1b8e4d0d9c4bbfebaf25fb62f6a6 759 Gene3D G3DSA:3.40.50.10380 8 160 4.9E-51 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 YE1162 ae5a1b8e4d0d9c4bbfebaf25fb62f6a6 759 Pfam PF01515 Phosphate acetyl/butaryl transferase 430 751 4.0E-99 T 22-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 YE1162 ae5a1b8e4d0d9c4bbfebaf25fb62f6a6 759 ProSitePatterns PS00331 Malic enzymes signature. 159 175 - T 22-04-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 YE1162 ae5a1b8e4d0d9c4bbfebaf25fb62f6a6 759 SUPERFAMILY SSF51735 163 453 4.37E-86 T 22-04-2016 IPR016040 NAD(P)-binding domain YE1162 ae5a1b8e4d0d9c4bbfebaf25fb62f6a6 759 Gene3D G3DSA:3.40.50.720 161 449 2.2E-87 T 22-04-2016 IPR016040 NAD(P)-binding domain YE1162 ae5a1b8e4d0d9c4bbfebaf25fb62f6a6 759 Pfam PF00390 Malic enzyme, N-terminal domain 19 151 3.6E-27 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 YE1162 ae5a1b8e4d0d9c4bbfebaf25fb62f6a6 759 SMART SM01274 18 151 2.7E-79 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 YE1162 ae5a1b8e4d0d9c4bbfebaf25fb62f6a6 759 SUPERFAMILY SSF53223 10 161 2.09E-52 T 22-04-2016 YE1162 ae5a1b8e4d0d9c4bbfebaf25fb62f6a6 759 SUPERFAMILY SSF53659 430 754 2.67E-91 T 22-04-2016 YE1162 ae5a1b8e4d0d9c4bbfebaf25fb62f6a6 759 PIRSF PIRSF036684 1 758 0.0 T 22-04-2016 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase GO:0004473|GO:0005829|GO:0006108|GO:0016616|GO:0030145|GO:0046872|GO:0055114 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 YE1162 ae5a1b8e4d0d9c4bbfebaf25fb62f6a6 759 SMART SM00919 163 401 9.7E-141 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 YE1162 ae5a1b8e4d0d9c4bbfebaf25fb62f6a6 759 Gene3D G3DSA:3.40.50.10750 570 726 9.0E-52 T 22-04-2016 YE2379 7dea36f34acf81cb763b369fac09252e 114 SUPERFAMILY SSF55298 2 114 8.01E-26 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like YE2379 7dea36f34acf81cb763b369fac09252e 114 PANTHER PTHR11803 1 114 8.0E-33 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family YE2379 7dea36f34acf81cb763b369fac09252e 114 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 90 108 - T 22-04-2016 IPR019897 RidA, conserved site YE2379 7dea36f34acf81cb763b369fac09252e 114 PANTHER PTHR11803:SF11 1 114 8.0E-33 T 22-04-2016 YE2379 7dea36f34acf81cb763b369fac09252e 114 Gene3D G3DSA:3.30.1330.40 6 114 1.8E-20 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like YE2379 7dea36f34acf81cb763b369fac09252e 114 Pfam PF01042 Endoribonuclease L-PSP 4 113 3.2E-25 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family YE3968 612ffe8b3c59468dd237caba46c46a6c 472 PANTHER PTHR21091:SF16 165 442 1.9E-84 T 22-04-2016 YE3968 612ffe8b3c59468dd237caba46c46a6c 472 SUPERFAMILY SSF53790 215 456 8.37E-80 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 YE3968 612ffe8b3c59468dd237caba46c46a6c 472 PANTHER PTHR21091 165 442 1.9E-84 T 22-04-2016 YE3968 612ffe8b3c59468dd237caba46c46a6c 472 Pfam PF10414 Sirohaem synthase dimerisation region 150 208 7.6E-19 T 22-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YE3968 612ffe8b3c59468dd237caba46c46a6c 472 SUPERFAMILY SSF75615 114 201 8.37E-27 T 22-04-2016 YE3968 612ffe8b3c59468dd237caba46c46a6c 472 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 221 235 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YE3968 612ffe8b3c59468dd237caba46c46a6c 472 Gene3D G3DSA:3.30.160.110 113 148 9.0E-20 T 22-04-2016 YE3968 612ffe8b3c59468dd237caba46c46a6c 472 Pfam PF14824 Sirohaem biosynthesis protein central 121 146 7.7E-9 T 22-04-2016 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YE3968 612ffe8b3c59468dd237caba46c46a6c 472 Pfam PF13241 Putative NAD(P)-binding 6 115 2.0E-25 T 22-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YE3968 612ffe8b3c59468dd237caba46c46a6c 472 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 218 427 1.8E-50 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 YE3968 612ffe8b3c59468dd237caba46c46a6c 472 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 296 329 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YE3968 612ffe8b3c59468dd237caba46c46a6c 472 Gene3D G3DSA:1.10.8.210 149 211 4.2E-23 T 22-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YE3968 612ffe8b3c59468dd237caba46c46a6c 472 Gene3D G3DSA:3.40.1010.10 215 331 1.0E-45 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 YE3968 612ffe8b3c59468dd237caba46c46a6c 472 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 216 448 4.1E-93 T 22-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YE3968 612ffe8b3c59468dd237caba46c46a6c 472 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 207 8.1E-71 T 22-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YE3968 612ffe8b3c59468dd237caba46c46a6c 472 SUPERFAMILY SSF51735 1 112 2.29E-25 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3968 612ffe8b3c59468dd237caba46c46a6c 472 Hamap MF_01646 Siroheme synthase [cysG]. 1 457 51.501 T 22-04-2016 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YE3968 612ffe8b3c59468dd237caba46c46a6c 472 PIRSF PIRSF036426 1 465 5.4E-204 T 22-04-2016 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YE3968 612ffe8b3c59468dd237caba46c46a6c 472 Gene3D G3DSA:3.40.50.720 1 112 5.9E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3968 612ffe8b3c59468dd237caba46c46a6c 472 Gene3D G3DSA:3.30.950.10 332 464 1.0E-48 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 YE2067 c4eb639d9e4c6a5ca9e30fa352f3d2e8 309 Gene3D G3DSA:3.40.1190.20 1 305 9.3E-90 T 22-04-2016 IPR029056 Ribokinase-like YE2067 c4eb639d9e4c6a5ca9e30fa352f3d2e8 309 Pfam PF00294 pfkB family carbohydrate kinase 2 294 2.5E-62 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB YE2067 c4eb639d9e4c6a5ca9e30fa352f3d2e8 309 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 3 297 7.0E-109 T 22-04-2016 IPR011877 Ribokinase, bacterial type GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|UniPathway: UPA00916 YE2067 c4eb639d9e4c6a5ca9e30fa352f3d2e8 309 PRINTS PR00990 Ribokinase signature 173 188 9.2E-29 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 YE2067 c4eb639d9e4c6a5ca9e30fa352f3d2e8 309 PRINTS PR00990 Ribokinase signature 5 26 9.2E-29 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 YE2067 c4eb639d9e4c6a5ca9e30fa352f3d2e8 309 PRINTS PR00990 Ribokinase signature 217 228 9.2E-29 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 YE2067 c4eb639d9e4c6a5ca9e30fa352f3d2e8 309 PRINTS PR00990 Ribokinase signature 104 117 9.2E-29 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 YE2067 c4eb639d9e4c6a5ca9e30fa352f3d2e8 309 PRINTS PR00990 Ribokinase signature 32 51 9.2E-29 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 YE2067 c4eb639d9e4c6a5ca9e30fa352f3d2e8 309 PANTHER PTHR10584 1 303 3.3E-109 T 22-04-2016 YE2067 c4eb639d9e4c6a5ca9e30fa352f3d2e8 309 PANTHER PTHR10584:SF184 1 303 3.3E-109 T 22-04-2016 YE2067 c4eb639d9e4c6a5ca9e30fa352f3d2e8 309 SUPERFAMILY SSF53613 1 302 9.04E-83 T 22-04-2016 IPR029056 Ribokinase-like YE0388 e236511be55adf240b792f7090086271 249 SUPERFAMILY SSF53474 12 249 9.84E-39 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE0388 e236511be55adf240b792f7090086271 249 Gene3D G3DSA:3.40.50.1820 3 249 4.0E-50 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE0388 e236511be55adf240b792f7090086271 249 Pfam PF00326 Prolyl oligopeptidase family 96 234 9.9E-14 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 YE1483 d33dac69782918ef527048432d4b8c89 161 Pfam PF10722 Putative bacterial sensory transduction regulator 9 130 1.3E-14 T 22-04-2016 IPR019660 Putative sensory transduction regulator YbjN YE3956 d75a08f2df46aefe42f07e4ef3663c53 706 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 13 685 9.1E-160 T 22-04-2016 IPR010020 Integral membrane protein, YccS/YhfK YE3956 d75a08f2df46aefe42f07e4ef3663c53 706 PANTHER PTHR30509:SF4 1 702 0.0 T 22-04-2016 YE3956 d75a08f2df46aefe42f07e4ef3663c53 706 Pfam PF13515 Fusaric acid resistance protein-like 380 500 1.2E-21 T 22-04-2016 YE3956 d75a08f2df46aefe42f07e4ef3663c53 706 Pfam PF12805 FUSC-like inner membrane protein yccS 64 332 7.0E-66 T 22-04-2016 IPR032692 Integral membrane protein YccS, N-terminal YE3956 d75a08f2df46aefe42f07e4ef3663c53 706 PANTHER PTHR30509 1 702 0.0 T 22-04-2016 YE3393 ae81b09de9db06eb9ca69eb4476c0443 365 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 263 353 5.0E-19 T 22-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 YE3393 ae81b09de9db06eb9ca69eb4476c0443 365 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 359 43.643 T 22-04-2016 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 YE3393 ae81b09de9db06eb9ca69eb4476c0443 365 Gene3D G3DSA:3.30.70.1400 54 137 2.4E-32 T 22-04-2016 YE3393 ae81b09de9db06eb9ca69eb4476c0443 365 Gene3D G3DSA:2.40.30.110 278 361 1.6E-27 T 22-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 YE3393 ae81b09de9db06eb9ca69eb4476c0443 365 Gene3D G3DSA:3.30.1360.120 3 53 7.2E-52 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 YE3393 ae81b09de9db06eb9ca69eb4476c0443 365 Gene3D G3DSA:3.30.1360.120 144 231 7.2E-52 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 YE3393 ae81b09de9db06eb9ca69eb4476c0443 365 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 2 358 4.6E-153 T 22-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 YE3393 ae81b09de9db06eb9ca69eb4476c0443 365 SUPERFAMILY SSF101790 270 360 8.99E-26 T 22-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain YE3393 ae81b09de9db06eb9ca69eb4476c0443 365 SUPERFAMILY SSF103025 3 277 1.22E-90 T 22-04-2016 YE3393 ae81b09de9db06eb9ca69eb4476c0443 365 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 254 2.4E-82 T 22-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal YE3393 ae81b09de9db06eb9ca69eb4476c0443 365 PIRSF PIRSF006487 1 362 1.1E-80 T 22-04-2016 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 YE3393 ae81b09de9db06eb9ca69eb4476c0443 365 PANTHER PTHR13847 5 353 8.1E-64 T 22-04-2016 YE3393 ae81b09de9db06eb9ca69eb4476c0443 365 PANTHER PTHR13847:SF5 5 353 8.1E-64 T 22-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 YE0927 8ef111e47c0fe15509db19940fc53614 693 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 78 150 8.0E-11 T 22-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 YE0927 8ef111e47c0fe15509db19940fc53614 693 PANTHER PTHR11573 7 679 4.7E-269 T 22-04-2016 YE0927 8ef111e47c0fe15509db19940fc53614 693 Pfam PF02867 Ribonucleotide reductase, barrel domain 155 672 6.7E-144 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YE0927 8ef111e47c0fe15509db19940fc53614 693 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 82 675 5.1E-161 T 22-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 YE0927 8ef111e47c0fe15509db19940fc53614 693 SUPERFAMILY SSF48168 1 153 1.44E-59 T 22-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 YE0927 8ef111e47c0fe15509db19940fc53614 693 Gene3D G3DSA:3.20.70.20 329 492 8.9E-56 T 22-04-2016 YE0927 8ef111e47c0fe15509db19940fc53614 693 Gene3D G3DSA:3.20.70.20 81 276 8.9E-56 T 22-04-2016 YE0927 8ef111e47c0fe15509db19940fc53614 693 Gene3D G3DSA:3.20.70.20 556 672 8.9E-56 T 22-04-2016 YE0927 8ef111e47c0fe15509db19940fc53614 693 PRINTS PR01183 Ribonucleotide reductase large chain signature 230 249 6.5E-33 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YE0927 8ef111e47c0fe15509db19940fc53614 693 PRINTS PR01183 Ribonucleotide reductase large chain signature 405 428 6.5E-33 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YE0927 8ef111e47c0fe15509db19940fc53614 693 PRINTS PR01183 Ribonucleotide reductase large chain signature 472 495 6.5E-33 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YE0927 8ef111e47c0fe15509db19940fc53614 693 PRINTS PR01183 Ribonucleotide reductase large chain signature 361 372 6.5E-33 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YE0927 8ef111e47c0fe15509db19940fc53614 693 PRINTS PR01183 Ribonucleotide reductase large chain signature 444 466 6.5E-33 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YE0927 8ef111e47c0fe15509db19940fc53614 693 PRINTS PR01183 Ribonucleotide reductase large chain signature 556 583 6.5E-33 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YE0927 8ef111e47c0fe15509db19940fc53614 693 TIGRFAM TIGR04170 RNR_1b_NrdE: ribonucleoside-diphosphate reductase, class 1b, alpha subunit 1 693 0.0 T 22-04-2016 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 YE0927 8ef111e47c0fe15509db19940fc53614 693 SUPERFAMILY SSF51998 154 677 1.43E-188 T 22-04-2016 YE0927 8ef111e47c0fe15509db19940fc53614 693 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 545 567 - T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YE0927 8ef111e47c0fe15509db19940fc53614 693 Pfam PF08343 Ribonucleotide reductase N-terminal 1 76 5.3E-30 T 22-04-2016 IPR013554 Ribonucleotide reductase N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 YE1692 0bc25779982a3ef0c328ac28db6486a1 327 SUPERFAMILY SSF56349 61 316 1.56E-43 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YE1692 0bc25779982a3ef0c328ac28db6486a1 327 Gene3D G3DSA:1.10.443.10 161 318 5.4E-34 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 YE1692 0bc25779982a3ef0c328ac28db6486a1 327 Pfam PF00589 Phage integrase family 164 308 2.9E-20 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 YE1692 0bc25779982a3ef0c328ac28db6486a1 327 PANTHER PTHR30349:SF20 63 318 1.3E-35 T 22-04-2016 YE1692 0bc25779982a3ef0c328ac28db6486a1 327 PANTHER PTHR30349 63 318 1.3E-35 T 22-04-2016 YE3528 774174c4f8342281b95e6d240b57d9b1 446 SUPERFAMILY SSF56954 8 435 2.62E-73 T 22-04-2016 YE3528 774174c4f8342281b95e6d240b57d9b1 446 PANTHER PTHR30203 5 435 2.0E-255 T 22-04-2016 YE3528 774174c4f8342281b95e6d240b57d9b1 446 PANTHER PTHR30203:SF8 5 435 2.0E-255 T 22-04-2016 YE3528 774174c4f8342281b95e6d240b57d9b1 446 Gene3D G3DSA:1.20.1600.10 11 435 1.8E-72 T 22-04-2016 YE3528 774174c4f8342281b95e6d240b57d9b1 446 Pfam PF02321 Outer membrane efflux protein 244 433 2.0E-21 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 YE3528 774174c4f8342281b95e6d240b57d9b1 446 Pfam PF02321 Outer membrane efflux protein 25 218 5.9E-28 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 YE3528 774174c4f8342281b95e6d240b57d9b1 446 PIRSF PIRSF001892 1 442 9.9E-157 T 22-04-2016 IPR028351 Cyclolysin transport protein CyaE GO:0005215 YE2824 c4f18c56b23c3d14699900c2ff1a4ebb 420 Pfam PF13437 HlyD family secretion protein 235 320 2.0E-7 T 22-04-2016 YE2824 c4f18c56b23c3d14699900c2ff1a4ebb 420 Gene3D G3DSA:2.40.50.100 233 264 3.1E-10 T 22-04-2016 YE2824 c4f18c56b23c3d14699900c2ff1a4ebb 420 Gene3D G3DSA:2.40.50.100 77 108 3.1E-10 T 22-04-2016 YE2824 c4f18c56b23c3d14699900c2ff1a4ebb 420 PANTHER PTHR30469 3 115 4.4E-77 T 22-04-2016 YE2824 c4f18c56b23c3d14699900c2ff1a4ebb 420 PANTHER PTHR30469 141 404 4.4E-77 T 22-04-2016 YE2824 c4f18c56b23c3d14699900c2ff1a4ebb 420 PANTHER PTHR30469:SF15 3 115 4.4E-77 T 22-04-2016 YE2824 c4f18c56b23c3d14699900c2ff1a4ebb 420 PANTHER PTHR30469:SF15 141 404 4.4E-77 T 22-04-2016 YE2925 8018ede1a72fd524529c6e508fd9a7ea 360 PANTHER PTHR21225 1 360 2.3E-264 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 YE2925 8018ede1a72fd524529c6e508fd9a7ea 360 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 16 359 4.3E-177 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 YE2925 8018ede1a72fd524529c6e508fd9a7ea 360 PANTHER PTHR21225:SF7 1 360 2.3E-264 T 22-04-2016 YE2925 8018ede1a72fd524529c6e508fd9a7ea 360 Pfam PF00793 DAHP synthetase I family 47 348 1.5E-107 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 YE2925 8018ede1a72fd524529c6e508fd9a7ea 360 SUPERFAMILY SSF51569 17 358 7.12E-139 T 22-04-2016 YE2925 8018ede1a72fd524529c6e508fd9a7ea 360 Gene3D G3DSA:3.20.20.70 19 360 2.9E-161 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YE2925 8018ede1a72fd524529c6e508fd9a7ea 360 PIRSF PIRSF001361 4 360 2.0E-165 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 YE0165 8a41acd302557f009dfe0f05920adcc0 498 PIRSF PIRSF001267 1 497 6.5E-181 T 22-04-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40|UniPathway: UPA00908 YE0165 8a41acd302557f009dfe0f05920adcc0 498 SUPERFAMILY SSF53067 133 301 2.42E-41 T 22-04-2016 YE0165 8a41acd302557f009dfe0f05920adcc0 498 SUPERFAMILY SSF109604 308 495 2.29E-45 T 22-04-2016 YE0165 8a41acd302557f009dfe0f05920adcc0 498 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 9 301 1.9E-93 T 22-04-2016 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 YE0165 8a41acd302557f009dfe0f05920adcc0 498 SUPERFAMILY SSF53067 8 129 3.14E-38 T 22-04-2016 YE0165 8a41acd302557f009dfe0f05920adcc0 498 PANTHER PTHR30005 1 498 0.0 T 22-04-2016 YE0165 8a41acd302557f009dfe0f05920adcc0 498 Gene3D G3DSA:3.30.420.150 129 301 4.9E-52 T 22-04-2016 YE0165 8a41acd302557f009dfe0f05920adcc0 498 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 1 495 57.959 T 22-04-2016 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40|UniPathway: UPA00908 YE0165 8a41acd302557f009dfe0f05920adcc0 498 Pfam PF02541 Ppx/GppA phosphatase family 22 302 6.8E-97 T 22-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 YE0165 8a41acd302557f009dfe0f05920adcc0 498 Gene3D G3DSA:3.30.420.40 3 128 1.8E-46 T 22-04-2016 YE0165 8a41acd302557f009dfe0f05920adcc0 498 PANTHER PTHR30005:SF2 1 498 0.0 T 22-04-2016 YE0119 827340d916dc07ba2f6334ac89bbc9e9 334 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 334 38.672 T 22-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YE0119 827340d916dc07ba2f6334ac89bbc9e9 334 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 163 311 2.7E-14 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YE0119 827340d916dc07ba2f6334ac89bbc9e9 334 PANTHER PTHR32338 1 334 2.9E-165 T 22-04-2016 YE0119 827340d916dc07ba2f6334ac89bbc9e9 334 SMART SM00859 3 146 5.4E-52 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 YE0119 827340d916dc07ba2f6334ac89bbc9e9 334 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 22-04-2016 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YE0119 827340d916dc07ba2f6334ac89bbc9e9 334 Gene3D G3DSA:3.30.360.10 163 308 6.3E-49 T 22-04-2016 YE0119 827340d916dc07ba2f6334ac89bbc9e9 334 SUPERFAMILY SSF51735 2 183 6.23E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain YE0119 827340d916dc07ba2f6334ac89bbc9e9 334 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 146 3.9E-34 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 YE0119 827340d916dc07ba2f6334ac89bbc9e9 334 Gene3D G3DSA:3.40.50.720 1 162 6.6E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain YE0119 827340d916dc07ba2f6334ac89bbc9e9 334 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 333 5.2E-127 T 22-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YE0119 827340d916dc07ba2f6334ac89bbc9e9 334 SUPERFAMILY SSF55347 154 308 1.12E-49 T 22-04-2016 YE1495 54096255bfb9307e8750a68d0b465382 243 PANTHER PTHR18966:SF194 4 243 2.3E-124 T 22-04-2016 YE1495 54096255bfb9307e8750a68d0b465382 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 242 2.9E-71 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YE1495 54096255bfb9307e8750a68d0b465382 243 PANTHER PTHR18966 4 243 2.3E-124 T 22-04-2016 YE1495 54096255bfb9307e8750a68d0b465382 243 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 45 58 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 YE1495 54096255bfb9307e8750a68d0b465382 243 SMART SM00079 22 243 1.4E-5 T 22-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 YE1495 54096255bfb9307e8750a68d0b465382 243 Gene3D G3DSA:3.40.190.10 111 201 1.5E-28 T 22-04-2016 YE1495 54096255bfb9307e8750a68d0b465382 243 Gene3D G3DSA:3.40.190.10 20 108 1.8E-46 T 22-04-2016 YE1495 54096255bfb9307e8750a68d0b465382 243 Gene3D G3DSA:3.40.190.10 203 242 1.8E-46 T 22-04-2016 YE1495 54096255bfb9307e8750a68d0b465382 243 SMART SM00062 22 241 2.5E-86 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YE1495 54096255bfb9307e8750a68d0b465382 243 SUPERFAMILY SSF53850 1 242 5.23E-74 T 22-04-2016 YE1495 54096255bfb9307e8750a68d0b465382 243 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 5 241 2.1E-90 T 22-04-2016 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 YE0819 2579ea30fa3e35f1ed15b44e2af6eeb8 204 SUPERFAMILY SSF141318 49 200 4.05E-44 T 22-04-2016 YE0819 2579ea30fa3e35f1ed15b44e2af6eeb8 204 Pfam PF10054 Predicted periplasmic lipoprotein (DUF2291) 13 199 9.4E-36 T 22-04-2016 IPR014582 Uncharacterised conserved protein UCP033535, periplasmic lipoprotein YE0819 2579ea30fa3e35f1ed15b44e2af6eeb8 204 PIRSF PIRSF033535 1 203 2.6E-70 T 22-04-2016 IPR014582 Uncharacterised conserved protein UCP033535, periplasmic lipoprotein YE3439 d371c7c10be8f64c655c8931a766022c 246 Pfam PF11101 Protein of unknown function (DUF2884) 29 245 4.5E-47 T 22-04-2016 IPR021307 Protein of unknown function DUF2884 YE4070 8889ab397f34a0b4deb8c2288a8c1ffb 234 PANTHER PTHR38105:SF1 1 234 1.4E-126 T 22-04-2016 YE4070 8889ab397f34a0b4deb8c2288a8c1ffb 234 SUPERFAMILY SSF56935 56 234 3.36E-11 T 22-04-2016 YE4070 8889ab397f34a0b4deb8c2288a8c1ffb 234 PANTHER PTHR38105 1 234 1.4E-126 T 22-04-2016 YE4070 8889ab397f34a0b4deb8c2288a8c1ffb 234 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 14 234 4.0E-80 T 22-04-2016 IPR009331 Oligogalacturonate-specific porin YE4070 8889ab397f34a0b4deb8c2288a8c1ffb 234 Gene3D G3DSA:2.40.230.30 22 234 1.9E-70 T 22-04-2016 YE2906 44f1ac71dbf635e2f6abdec294fbac1f 383 PANTHER PTHR13693:SF53 4 381 2.0E-167 T 22-04-2016 YE2906 44f1ac71dbf635e2f6abdec294fbac1f 383 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 233 242 - T 22-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 YE2906 44f1ac71dbf635e2f6abdec294fbac1f 383 Gene3D G3DSA:3.90.1150.10 269 381 3.4E-33 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YE2906 44f1ac71dbf635e2f6abdec294fbac1f 383 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 20 379 4.0E-138 T 22-04-2016 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147|UniPathway: UPA00078 YE2906 44f1ac71dbf635e2f6abdec294fbac1f 383 Pfam PF00155 Aminotransferase class I and II 41 378 3.6E-62 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YE2906 44f1ac71dbf635e2f6abdec294fbac1f 383 PANTHER PTHR13693 4 381 2.0E-167 T 22-04-2016 YE2906 44f1ac71dbf635e2f6abdec294fbac1f 383 SUPERFAMILY SSF53383 4 379 1.05E-102 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YE2906 44f1ac71dbf635e2f6abdec294fbac1f 383 Gene3D G3DSA:3.40.640.10 57 268 7.3E-79 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YE2906 44f1ac71dbf635e2f6abdec294fbac1f 383 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 3 382 48.664 T 22-04-2016 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147|UniPathway: UPA00078 YE1047 7961aa5deaf1e458c78e4c8549df31ca 417 SUPERFAMILY SSF53383 6 416 8.8E-182 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YE1047 7961aa5deaf1e458c78e4c8549df31ca 417 Gene3D G3DSA:3.90.1150.10 286 416 6.5E-56 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YE1047 7961aa5deaf1e458c78e4c8549df31ca 417 Gene3D G3DSA:3.40.640.10 37 285 7.5E-107 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YE1047 7961aa5deaf1e458c78e4c8549df31ca 417 PIRSF PIRSF000412 1 417 5.8E-171 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 YE1047 7961aa5deaf1e458c78e4c8549df31ca 417 Pfam PF00464 Serine hydroxymethyltransferase 8 386 1.6E-186 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 YE1047 7961aa5deaf1e458c78e4c8549df31ca 417 PANTHER PTHR11680:SF9 1 416 0.0 T 22-04-2016 YE1047 7961aa5deaf1e458c78e4c8549df31ca 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 22-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 YE1047 7961aa5deaf1e458c78e4c8549df31ca 417 PANTHER PTHR11680 1 416 0.0 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 YE1047 7961aa5deaf1e458c78e4c8549df31ca 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 52.646 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 YE1345 2df207d132bf2e6dc2b11adf3f1bac31 225 Gene3D G3DSA:3.40.50.700 52 179 2.6E-31 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 YE1345 2df207d132bf2e6dc2b11adf3f1bac31 225 PANTHER PTHR11995 2 221 4.5E-140 T 22-04-2016 YE1345 2df207d132bf2e6dc2b11adf3f1bac31 225 SUPERFAMILY SSF56770 43 190 5.1E-64 T 22-04-2016 YE1345 2df207d132bf2e6dc2b11adf3f1bac31 225 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 28 182 41.895 T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 YE1345 2df207d132bf2e6dc2b11adf3f1bac31 225 PANTHER PTHR11995:SF14 2 221 4.5E-140 T 22-04-2016 YE1345 2df207d132bf2e6dc2b11adf3f1bac31 225 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 46 183 9.4E-69 T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 YE1345 2df207d132bf2e6dc2b11adf3f1bac31 225 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 149 165 - T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 YE1345 2df207d132bf2e6dc2b11adf3f1bac31 225 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 69 175 5.1E-22 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 YE2153 73dcbda2dc9d6bf9aedef1bf9cf6d10b 135 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 22-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 YE2153 73dcbda2dc9d6bf9aedef1bf9cf6d10b 135 SUPERFAMILY SSF54593 1 128 2.42E-35 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase YE2153 73dcbda2dc9d6bf9aedef1bf9cf6d10b 135 PANTHER PTHR10374 1 129 1.0E-58 T 22-04-2016 YE2153 73dcbda2dc9d6bf9aedef1bf9cf6d10b 135 Gene3D G3DSA:3.10.180.10 1 127 1.2E-47 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase YE2153 73dcbda2dc9d6bf9aedef1bf9cf6d10b 135 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 134 4.5E-67 T 22-04-2016 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 YE2153 73dcbda2dc9d6bf9aedef1bf9cf6d10b 135 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 2.4E-26 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain YE3698 834809ca6f5b0d503b8822d55ba89a37 673 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 332 6.5E-86 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 YE3698 834809ca6f5b0d503b8822d55ba89a37 673 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 377 399 1.8E-5 T 22-04-2016 YE3698 834809ca6f5b0d503b8822d55ba89a37 673 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 620 634 1.8E-5 T 22-04-2016 YE3698 834809ca6f5b0d503b8822d55ba89a37 673 PANTHER PTHR22893:SF25 1 418 1.6E-247 T 22-04-2016 YE3698 834809ca6f5b0d503b8822d55ba89a37 673 Gene3D G3DSA:3.50.50.60 472 626 5.2E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE3698 834809ca6f5b0d503b8822d55ba89a37 673 Gene3D G3DSA:3.50.50.60 362 464 6.8E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE3698 834809ca6f5b0d503b8822d55ba89a37 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 498 516 5.7E-11 T 22-04-2016 YE3698 834809ca6f5b0d503b8822d55ba89a37 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 378 397 5.7E-11 T 22-04-2016 YE3698 834809ca6f5b0d503b8822d55ba89a37 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 619 635 5.7E-11 T 22-04-2016 YE3698 834809ca6f5b0d503b8822d55ba89a37 673 SUPERFAMILY SSF51395 3 363 3.4E-110 T 22-04-2016 YE3698 834809ca6f5b0d503b8822d55ba89a37 673 PANTHER PTHR22893 1 418 1.6E-247 T 22-04-2016 YE3698 834809ca6f5b0d503b8822d55ba89a37 673 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 377 636 3.9E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE3698 834809ca6f5b0d503b8822d55ba89a37 673 Gene3D G3DSA:3.20.20.70 4 361 1.4E-120 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YE3698 834809ca6f5b0d503b8822d55ba89a37 673 SUPERFAMILY SSF51905 567 651 1.04E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE3698 834809ca6f5b0d503b8822d55ba89a37 673 SUPERFAMILY SSF51905 461 519 1.04E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE3698 834809ca6f5b0d503b8822d55ba89a37 673 SUPERFAMILY SSF51971 334 519 1.29E-39 T 22-04-2016 YE4082 34e23dd12251624fc9535daebf59d8e0 339 PANTHER PTHR30465:SF0 194 337 6.7E-154 T 22-04-2016 YE4082 34e23dd12251624fc9535daebf59d8e0 339 PANTHER PTHR30465:SF0 1 169 6.7E-154 T 22-04-2016 YE4082 34e23dd12251624fc9535daebf59d8e0 339 SUPERFAMILY SSF161098 89 160 3.11E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE4082 34e23dd12251624fc9535daebf59d8e0 339 SUPERFAMILY SSF161098 200 322 3.11E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE4082 34e23dd12251624fc9535daebf59d8e0 339 PANTHER PTHR30465 194 337 6.7E-154 T 22-04-2016 YE4082 34e23dd12251624fc9535daebf59d8e0 339 PANTHER PTHR30465 1 169 6.7E-154 T 22-04-2016 YE4082 34e23dd12251624fc9535daebf59d8e0 339 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 336 3.4E-47 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE4082 34e23dd12251624fc9535daebf59d8e0 339 Gene3D G3DSA:1.10.3720.10 87 163 4.8E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE4082 34e23dd12251624fc9535daebf59d8e0 339 Gene3D G3DSA:1.10.3720.10 203 332 4.8E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE0281 159088693b81c1ecc5e52c3651233d37 142 Gene3D G3DSA:3.30.1550.10 2 72 5.0E-38 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal YE0281 159088693b81c1ecc5e52c3651233d37 142 PANTHER PTHR11661 1 142 5.6E-76 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 YE0281 159088693b81c1ecc5e52c3651233d37 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 6.0E-65 T 22-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 YE0281 159088693b81c1ecc5e52c3651233d37 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 1.9E-24 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 YE0281 159088693b81c1ecc5e52c3651233d37 142 SMART SM00649 9 141 1.4E-83 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 YE0281 159088693b81c1ecc5e52c3651233d37 142 SUPERFAMILY SSF46906 68 141 4.97E-26 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 YE0281 159088693b81c1ecc5e52c3651233d37 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 22-04-2016 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 YE0281 159088693b81c1ecc5e52c3651233d37 142 SUPERFAMILY SSF54747 3 73 2.49E-30 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal YE0281 159088693b81c1ecc5e52c3651233d37 142 Gene3D G3DSA:1.10.10.250 73 141 7.4E-31 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 YE0281 159088693b81c1ecc5e52c3651233d37 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.715 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 YE0281 159088693b81c1ecc5e52c3651233d37 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 2.0E-16 T 22-04-2016 YE0281 159088693b81c1ecc5e52c3651233d37 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 5.7E-30 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal YE4186 f1117b9155bb9b1a1139dd181fb66b47 183 SMART SM00448 1 97 2.1E-14 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE4186 f1117b9155bb9b1a1139dd181fb66b47 183 SMART SM00421 121 178 3.4E-19 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE4186 f1117b9155bb9b1a1139dd181fb66b47 183 PANTHER PTHR26402 1 175 4.8E-44 T 22-04-2016 YE4186 f1117b9155bb9b1a1139dd181fb66b47 183 Gene3D G3DSA:3.40.50.2300 1 129 3.9E-31 T 22-04-2016 YE4186 f1117b9155bb9b1a1139dd181fb66b47 183 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 124 138 5.6E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE4186 f1117b9155bb9b1a1139dd181fb66b47 183 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 138 154 5.6E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE4186 f1117b9155bb9b1a1139dd181fb66b47 183 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 166 5.6E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE4186 f1117b9155bb9b1a1139dd181fb66b47 183 Pfam PF00072 Response regulator receiver domain 3 97 6.1E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE4186 f1117b9155bb9b1a1139dd181fb66b47 183 SUPERFAMILY SSF52172 1 145 5.42E-30 T 22-04-2016 IPR011006 CheY-like superfamily YE4186 f1117b9155bb9b1a1139dd181fb66b47 183 Gene3D G3DSA:1.10.10.10 130 178 1.8E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE4186 f1117b9155bb9b1a1139dd181fb66b47 183 ProSitePatterns PS00622 LuxR-type HTH domain signature. 138 165 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE4186 f1117b9155bb9b1a1139dd181fb66b47 183 Pfam PF00196 Bacterial regulatory proteins, luxR family 123 177 7.1E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE4186 f1117b9155bb9b1a1139dd181fb66b47 183 PANTHER PTHR26402:SF546 1 175 4.8E-44 T 22-04-2016 YE2239 fbe6d6dae7b3ab2ac359058d44c11648 199 SUPERFAMILY SSF57716 142 191 2.85E-17 T 22-04-2016 YE2239 fbe6d6dae7b3ab2ac359058d44c11648 199 PIRSF PIRSF035805 1 197 2.0E-57 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 YE2239 fbe6d6dae7b3ab2ac359058d44c11648 199 Gene3D G3DSA:3.30.60.20 142 191 4.1E-20 T 22-04-2016 YE2239 fbe6d6dae7b3ab2ac359058d44c11648 199 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 35.86 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 YE2239 fbe6d6dae7b3ab2ac359058d44c11648 199 SUPERFAMILY SSF52540 1 141 2.79E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2239 fbe6d6dae7b3ab2ac359058d44c11648 199 PANTHER PTHR11441 1 198 5.7E-85 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 YE2239 fbe6d6dae7b3ab2ac359058d44c11648 199 Pfam PF00265 Thymidine kinase 2 186 3.4E-61 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 YE2239 fbe6d6dae7b3ab2ac359058d44c11648 199 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 22-04-2016 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 YE2419 3b38a2ed1d75dd915d327aa3e3bc434e 187 Pfam PF07273 Protein of unknown function (DUF1439) 29 180 2.2E-57 T 22-04-2016 IPR010835 Protein of unknown function DUF1439 YE0792 c42b458330222e79c365d8ae88374341 391 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 383 6.2E-42 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 YE0792 c42b458330222e79c365d8ae88374341 391 PANTHER PTHR30572 1 368 3.8E-76 T 22-04-2016 YE0792 c42b458330222e79c365d8ae88374341 391 Gene3D G3DSA:2.40.50.100 66 99 1.2E-16 T 22-04-2016 YE0792 c42b458330222e79c365d8ae88374341 391 Gene3D G3DSA:2.40.50.100 188 220 1.2E-16 T 22-04-2016 YE0792 c42b458330222e79c365d8ae88374341 391 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 57 269 1.4E-14 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YE0792 c42b458330222e79c365d8ae88374341 391 PANTHER PTHR30572:SF3 1 368 3.8E-76 T 22-04-2016 YE0792 c42b458330222e79c365d8ae88374341 391 SUPERFAMILY SSF111369 57 243 1.28E-22 T 22-04-2016 YE3841 717742f901137c19586a281496f1b82b 223 Gene3D G3DSA:3.40.30.10 5 90 9.8E-22 T 22-04-2016 IPR012336 Thioredoxin-like fold YE3841 717742f901137c19586a281496f1b82b 223 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 74 2.3E-16 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 YE3841 717742f901137c19586a281496f1b82b 223 Pfam PF00043 Glutathione S-transferase, C-terminal domain 143 206 1.8E-7 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal YE3841 717742f901137c19586a281496f1b82b 223 SUPERFAMILY SSF47616 84 215 3.9E-22 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like YE3841 717742f901137c19586a281496f1b82b 223 Gene3D G3DSA:1.20.1050.10 91 211 2.0E-22 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like YE3841 717742f901137c19586a281496f1b82b 223 PANTHER PTHR11260:SF282 1 218 1.5E-101 T 22-04-2016 YE3841 717742f901137c19586a281496f1b82b 223 SUPERFAMILY SSF52833 3 78 2.29E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold YE3841 717742f901137c19586a281496f1b82b 223 PANTHER PTHR11260 1 218 1.5E-101 T 22-04-2016 YE4039 32feba1d62144b703538a529295a6c14 293 SUPERFAMILY SSF54211 8 157 1.29E-21 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YE4039 32feba1d62144b703538a529295a6c14 293 PIRSF PIRSF033887 3 287 6.6E-63 T 22-04-2016 IPR012363 Propanediol utilisation/coumermycin biosynthesis, PduX-related KEGG: 00040+2.7.1.17|KEGG: 00860+2.7.1.177|MetaCyc: PWY-5443|UniPathway: UPA00148 YE4039 32feba1d62144b703538a529295a6c14 293 PANTHER PTHR20861:SF5 46 293 2.5E-70 T 22-04-2016 YE4039 32feba1d62144b703538a529295a6c14 293 Pfam PF00288 GHMP kinases N terminal domain 80 127 3.4E-8 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 YE4039 32feba1d62144b703538a529295a6c14 293 Gene3D G3DSA:3.30.230.10 51 122 2.8E-11 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YE4039 32feba1d62144b703538a529295a6c14 293 PANTHER PTHR20861 46 293 2.5E-70 T 22-04-2016 YE1953 818fc6646566bcd4a2a0d337f45c1bf8 150 Pfam PF05954 Phage late control gene D protein (GPD) 28 128 2.2E-10 T 22-04-2016 YE2133 949fa0d17cdfa19cb64b60942e268646 488 PANTHER PTHR11654:SF99 225 483 2.5E-249 T 22-04-2016 YE2133 949fa0d17cdfa19cb64b60942e268646 488 PANTHER PTHR11654:SF99 2 207 2.5E-249 T 22-04-2016 YE2133 949fa0d17cdfa19cb64b60942e268646 488 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 4 472 5.1E-139 T 22-04-2016 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 YE2133 949fa0d17cdfa19cb64b60942e268646 488 Hamap MF_01878 Dipeptide and tripeptide permease A [dtpA]. 1 476 51.62 T 22-04-2016 IPR023517 Amino acid/peptide transporter family, dipeptide and tripeptide permease A GO:0006857|GO:0015197|GO:0016020 YE2133 949fa0d17cdfa19cb64b60942e268646 488 SUPERFAMILY SSF103473 246 474 8.24E-30 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE2133 949fa0d17cdfa19cb64b60942e268646 488 SUPERFAMILY SSF103473 5 199 8.24E-30 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE2133 949fa0d17cdfa19cb64b60942e268646 488 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 139 151 - T 22-04-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 YE2133 949fa0d17cdfa19cb64b60942e268646 488 Pfam PF00854 POT family 76 432 1.8E-87 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 YE2133 949fa0d17cdfa19cb64b60942e268646 488 Gene3D G3DSA:1.20.1250.20 260 468 1.5E-8 T 22-04-2016 YE2133 949fa0d17cdfa19cb64b60942e268646 488 Gene3D G3DSA:1.20.1250.20 9 190 5.3E-19 T 22-04-2016 YE2133 949fa0d17cdfa19cb64b60942e268646 488 PANTHER PTHR11654 225 483 2.5E-249 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 YE2133 949fa0d17cdfa19cb64b60942e268646 488 PANTHER PTHR11654 2 207 2.5E-249 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 YE1244 3f0f7ba275a097832ce3aa24e3ea4231 576 SUPERFAMILY SSF51338 3 67 2.27E-18 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YE1244 3f0f7ba275a097832ce3aa24e3ea4231 576 SUPERFAMILY SSF51338 532 574 2.27E-18 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YE1244 3f0f7ba275a097832ce3aa24e3ea4231 576 PANTHER PTHR22642 2 574 2.5E-110 T 22-04-2016 YE1244 3f0f7ba275a097832ce3aa24e3ea4231 576 PANTHER PTHR22642:SF2 2 574 2.5E-110 T 22-04-2016 YE1244 3f0f7ba275a097832ce3aa24e3ea4231 576 Gene3D G3DSA:3.20.20.140 76 89 5.5E-30 T 22-04-2016 YE1244 3f0f7ba275a097832ce3aa24e3ea4231 576 Gene3D G3DSA:3.20.20.140 210 515 5.5E-30 T 22-04-2016 YE1244 3f0f7ba275a097832ce3aa24e3ea4231 576 Gene3D G3DSA:2.30.40.10 3 75 4.2E-11 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YE1244 3f0f7ba275a097832ce3aa24e3ea4231 576 SUPERFAMILY SSF51556 205 300 4.4E-27 T 22-04-2016 IPR032466 Metal-dependent hydrolase YE1244 3f0f7ba275a097832ce3aa24e3ea4231 576 SUPERFAMILY SSF51556 346 533 4.4E-27 T 22-04-2016 IPR032466 Metal-dependent hydrolase YE1244 3f0f7ba275a097832ce3aa24e3ea4231 576 SUPERFAMILY SSF51556 66 109 4.4E-27 T 22-04-2016 IPR032466 Metal-dependent hydrolase YE1244 3f0f7ba275a097832ce3aa24e3ea4231 576 Gene3D G3DSA:2.30.40.10 516 576 1.7E-8 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YE1244 3f0f7ba275a097832ce3aa24e3ea4231 576 Pfam PF07969 Amidohydrolase family 55 573 3.0E-74 T 22-04-2016 IPR013108 Amidohydrolase 3 YE0398 4d46e05019b0046a2fbdc10ed278764e 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 3 108 1.8E-22 T 22-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 YE0398 4d46e05019b0046a2fbdc10ed278764e 206 PANTHER PTHR10516:SF320 86 205 2.0E-66 T 22-04-2016 YE0398 4d46e05019b0046a2fbdc10ed278764e 206 PANTHER PTHR10516:SF320 14 67 2.0E-66 T 22-04-2016 YE0398 4d46e05019b0046a2fbdc10ed278764e 206 SUPERFAMILY SSF54534 8 205 5.5E-55 T 22-04-2016 YE0398 4d46e05019b0046a2fbdc10ed278764e 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 116 203 4.2E-27 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 YE0398 4d46e05019b0046a2fbdc10ed278764e 206 Gene3D G3DSA:3.10.50.40 91 205 8.8E-49 T 22-04-2016 YE0398 4d46e05019b0046a2fbdc10ed278764e 206 PANTHER PTHR10516 86 205 2.0E-66 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type YE0398 4d46e05019b0046a2fbdc10ed278764e 206 PANTHER PTHR10516 14 67 2.0E-66 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type YE0398 4d46e05019b0046a2fbdc10ed278764e 206 Gene3D G3DSA:1.10.287.460 2 90 3.1E-24 T 22-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 YE3849 3b6260b4cbb6007b70efa3e82a22789f 468 SUPERFAMILY SSF48024 22 133 4.18E-38 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 YE3849 3b6260b4cbb6007b70efa3e82a22789f 468 Gene3D G3DSA:3.40.50.300 188 461 3.2E-104 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3849 3b6260b4cbb6007b70efa3e82a22789f 468 Gene3D G3DSA:1.10.860.10 24 126 2.2E-40 T 22-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal YE3849 3b6260b4cbb6007b70efa3e82a22789f 468 SUPERFAMILY SSF52540 201 272 9.86E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3849 3b6260b4cbb6007b70efa3e82a22789f 468 SUPERFAMILY SSF52540 299 452 9.86E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3849 3b6260b4cbb6007b70efa3e82a22789f 468 Pfam PF03796 DnaB-like helicase C terminal domain 203 459 1.6E-113 T 22-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 YE3849 3b6260b4cbb6007b70efa3e82a22789f 468 SMART SM00382 220 426 3.6E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain YE3849 3b6260b4cbb6007b70efa3e82a22789f 468 Pfam PF00772 DnaB-like helicase N terminal domain 24 125 2.2E-36 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 YE3849 3b6260b4cbb6007b70efa3e82a22789f 468 PANTHER PTHR30153 8 468 8.0E-226 T 22-04-2016 YE3849 3b6260b4cbb6007b70efa3e82a22789f 468 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 23 461 4.7E-175 T 22-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 YE2162 31ecebce3a1797e2bf92293440c3ff75 216 PANTHER PTHR21098 1 203 1.8E-137 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 YE2162 31ecebce3a1797e2bf92293440c3ff75 216 PANTHER PTHR21098:SF4 1 203 1.8E-137 T 22-04-2016 YE2162 31ecebce3a1797e2bf92293440c3ff75 216 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 202 9.1E-85 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 YE2162 31ecebce3a1797e2bf92293440c3ff75 216 SUPERFAMILY SSF63380 1 93 1.19E-28 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 YE2162 31ecebce3a1797e2bf92293440c3ff75 216 Pfam PF00677 Lumazine binding domain 3 87 1.9E-20 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 YE2162 31ecebce3a1797e2bf92293440c3ff75 216 Pfam PF00677 Lumazine binding domain 100 185 1.9E-18 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 YE2162 31ecebce3a1797e2bf92293440c3ff75 216 SUPERFAMILY SSF63380 93 199 6.55E-32 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 YE2162 31ecebce3a1797e2bf92293440c3ff75 216 PIRSF PIRSF000498 1 213 1.8E-74 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 YE2162 31ecebce3a1797e2bf92293440c3ff75 216 Gene3D G3DSA:2.40.30.20 5 105 1.0E-32 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YE2162 31ecebce3a1797e2bf92293440c3ff75 216 Gene3D G3DSA:2.40.30.20 106 200 1.0E-26 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YE1956 10bd79b02ff4612eb063d774a04691b9 233 Pfam PF08448 PAS fold 31 130 2.3E-6 T 22-04-2016 IPR013656 PAS fold-4 YE1956 10bd79b02ff4612eb063d774a04691b9 233 SMART SM00421 155 212 0.0015 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE1956 10bd79b02ff4612eb063d774a04691b9 233 Gene3D G3DSA:1.10.10.10 153 216 1.6E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1956 10bd79b02ff4612eb063d774a04691b9 233 Pfam PF00196 Bacterial regulatory proteins, luxR family 157 205 1.2E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE1956 10bd79b02ff4612eb063d774a04691b9 233 SUPERFAMILY SSF46894 141 212 4.08E-12 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YE1767 78806afa6a71627da53c444e05171dec 569 PANTHER PTHR30627 2 562 1.9E-231 T 22-04-2016 YE1767 78806afa6a71627da53c444e05171dec 569 Pfam PF03717 Penicillin-binding Protein dimerisation domain 61 213 1.6E-16 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 YE1767 78806afa6a71627da53c444e05171dec 569 SUPERFAMILY SSF56601 228 565 4.99E-85 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YE1767 78806afa6a71627da53c444e05171dec 569 Gene3D G3DSA:3.90.1310.10 135 234 2.4E-32 T 22-04-2016 YE1767 78806afa6a71627da53c444e05171dec 569 Gene3D G3DSA:3.40.710.10 235 553 3.9E-84 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YE1767 78806afa6a71627da53c444e05171dec 569 SUPERFAMILY SSF56519 56 227 3.14E-46 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 YE1767 78806afa6a71627da53c444e05171dec 569 PANTHER PTHR30627:SF1 2 562 1.9E-231 T 22-04-2016 YE1767 78806afa6a71627da53c444e05171dec 569 Pfam PF00905 Penicillin binding protein transpeptidase domain 253 547 2.6E-78 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 YE3251 443997114cf5d4163a00ac30c61082d7 113 PANTHER PTHR35462:SF1 8 113 2.1E-62 T 22-04-2016 YE3251 443997114cf5d4163a00ac30c61082d7 113 PANTHER PTHR35462 8 113 2.1E-62 T 22-04-2016 YE3251 443997114cf5d4163a00ac30c61082d7 113 Pfam PF10043 Predicted periplasmic lipoprotein (DUF2279) 31 109 1.3E-7 T 22-04-2016 IPR018736 Protein of unknown function DUF2279, periplasmic lipoprotein YE3251 443997114cf5d4163a00ac30c61082d7 113 PIRSF PIRSF034456 7 113 2.0E-54 T 22-04-2016 IPR017028 Uncharacterised conserved protein UCP034456 YE3203 05274f114dfc947b987975bae6f9765d 133 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 1 128 32.676 T 22-04-2016 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 YE3203 05274f114dfc947b987975bae6f9765d 133 Pfam PF07417 Transcriptional regulator Crl 5 122 3.2E-55 T 22-04-2016 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 YE2914 7e7f9092a8b6c990a8de4496a923b735 263 SUPERFAMILY SSF46785 2 103 1.21E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2914 7e7f9092a8b6c990a8de4496a923b735 263 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 83 7.7E-13 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE2914 7e7f9092a8b6c990a8de4496a923b735 263 PANTHER PTHR30432 1 263 6.7E-75 T 22-04-2016 YE2914 7e7f9092a8b6c990a8de4496a923b735 263 PIRSF PIRSF005763 1 263 3.2E-94 T 22-04-2016 IPR016462 Molybdate-dependent transcriptional regulator ModE GO:0006355|GO:0015689|GO:0030151 YE2914 7e7f9092a8b6c990a8de4496a923b735 263 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 122 191 1.5E-25 T 22-04-2016 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 YE2914 7e7f9092a8b6c990a8de4496a923b735 263 Pfam PF03459 TOBE domain 198 258 6.4E-12 T 22-04-2016 IPR005116 Transport-associated OB, type 1 YE2914 7e7f9092a8b6c990a8de4496a923b735 263 Pfam PF03459 TOBE domain 124 188 2.3E-14 T 22-04-2016 IPR005116 Transport-associated OB, type 1 YE2914 7e7f9092a8b6c990a8de4496a923b735 263 Gene3D G3DSA:2.40.50.100 184 253 9.2E-21 T 22-04-2016 YE2914 7e7f9092a8b6c990a8de4496a923b735 263 SUPERFAMILY SSF50331 126 259 3.74E-20 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal YE2914 7e7f9092a8b6c990a8de4496a923b735 263 Gene3D G3DSA:1.10.10.10 1 118 6.4E-45 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2914 7e7f9092a8b6c990a8de4496a923b735 263 TIGRFAM TIGR00637 ModE_repress: ModE molybdate transport repressor domain 16 112 6.6E-38 T 22-04-2016 IPR003725 Molybdenum-binding protein ModE, N-terminal YE2914 7e7f9092a8b6c990a8de4496a923b735 263 Gene3D G3DSA:2.40.50.100 119 183 2.9E-32 T 22-04-2016 YE2045 becdf61bd66aaebefae9bf0be1ed91aa 252 Gene3D G3DSA:3.75.10.10 2 251 9.4E-64 T 22-04-2016 YE2045 becdf61bd66aaebefae9bf0be1ed91aa 252 SUPERFAMILY SSF55909 5 251 7.85E-47 T 22-04-2016 YE2045 becdf61bd66aaebefae9bf0be1ed91aa 252 PANTHER PTHR12737 1 252 1.9E-55 T 22-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 YE2045 becdf61bd66aaebefae9bf0be1ed91aa 252 Pfam PF02274 Amidinotransferase 34 249 6.2E-13 T 22-04-2016 YE2045 becdf61bd66aaebefae9bf0be1ed91aa 252 PANTHER PTHR12737:SF9 1 252 1.9E-55 T 22-04-2016 YE2227 f7dea37240e5e25e34e9c089bb2634f4 486 SUPERFAMILY SSF56024 274 473 2.47E-49 T 22-04-2016 YE2227 f7dea37240e5e25e34e9c089bb2634f4 486 SMART SM00155 219 246 0.001 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 YE2227 f7dea37240e5e25e34e9c089bb2634f4 486 SMART SM00155 399 426 7.3E-5 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 YE2227 f7dea37240e5e25e34e9c089bb2634f4 486 PANTHER PTHR21248 18 486 8.8E-303 T 22-04-2016 YE2227 f7dea37240e5e25e34e9c089bb2634f4 486 Pfam PF13396 Phospholipase_D-nuclease N-terminal 23 59 2.2E-7 T 22-04-2016 IPR027379 Cardiolipin synthase N-terminal YE2227 f7dea37240e5e25e34e9c089bb2634f4 486 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 6 486 2.7E-206 T 22-04-2016 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 YE2227 f7dea37240e5e25e34e9c089bb2634f4 486 Gene3D G3DSA:3.30.870.10 113 312 5.3E-36 T 22-04-2016 YE2227 f7dea37240e5e25e34e9c089bb2634f4 486 Gene3D G3DSA:3.30.870.10 313 458 3.7E-35 T 22-04-2016 YE2227 f7dea37240e5e25e34e9c089bb2634f4 486 PANTHER PTHR21248:SF9 18 486 8.8E-303 T 22-04-2016 YE2227 f7dea37240e5e25e34e9c089bb2634f4 486 SUPERFAMILY SSF56024 67 315 8.37E-48 T 22-04-2016 YE2227 f7dea37240e5e25e34e9c089bb2634f4 486 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 486 52.165 T 22-04-2016 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 YE2227 f7dea37240e5e25e34e9c089bb2634f4 486 Pfam PF13091 PLD-like domain 135 244 2.6E-11 T 22-04-2016 IPR025202 Phospholipase D-like domain YE2227 f7dea37240e5e25e34e9c089bb2634f4 486 Pfam PF13091 PLD-like domain 330 448 1.1E-22 T 22-04-2016 IPR025202 Phospholipase D-like domain YE3751 629ac56c5dc9df2aab366b1337bf7ec1 260 PANTHER PTHR30188:SF4 1 260 3.2E-128 T 22-04-2016 YE3751 629ac56c5dc9df2aab366b1337bf7ec1 260 Pfam PF02405 Permease MlaE 45 256 2.0E-75 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 YE3751 629ac56c5dc9df2aab366b1337bf7ec1 260 PANTHER PTHR30188 1 260 3.2E-128 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 YE3751 629ac56c5dc9df2aab366b1337bf7ec1 260 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 5 258 2.5E-103 T 22-04-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria YE2038 827c6178c17477973e66c54665d0b9c8 283 Gene3D G3DSA:1.20.1050.10 131 254 1.9E-42 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like YE2038 827c6178c17477973e66c54665d0b9c8 283 Pfam PF02798 Glutathione S-transferase, N-terminal domain 44 126 4.7E-9 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 YE2038 827c6178c17477973e66c54665d0b9c8 283 Pfam PF13410 Glutathione S-transferase, C-terminal domain 174 243 5.5E-9 T 22-04-2016 YE2038 827c6178c17477973e66c54665d0b9c8 283 PANTHER PTHR11260:SF258 18 258 1.4E-130 T 22-04-2016 YE2038 827c6178c17477973e66c54665d0b9c8 283 SUPERFAMILY SSF47616 181 258 1.5E-33 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like YE2038 827c6178c17477973e66c54665d0b9c8 283 SUPERFAMILY SSF47616 117 152 1.5E-33 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like YE2038 827c6178c17477973e66c54665d0b9c8 283 Gene3D G3DSA:3.40.30.10 35 130 4.5E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold YE2038 827c6178c17477973e66c54665d0b9c8 283 SUPERFAMILY SSF52833 39 131 2.86E-18 T 22-04-2016 IPR012336 Thioredoxin-like fold YE2038 827c6178c17477973e66c54665d0b9c8 283 PANTHER PTHR11260 18 258 1.4E-130 T 22-04-2016 YE3696 b868d64d7c8a5df793525fe129f9e5f4 190 Pfam PF03729 Short repeat of unknown function (DUF308) 26 97 4.0E-12 T 22-04-2016 IPR005325 Protein of unknown function DUF308, membrane YE3696 b868d64d7c8a5df793525fe129f9e5f4 190 Pfam PF03729 Short repeat of unknown function (DUF308) 84 152 3.5E-9 T 22-04-2016 IPR005325 Protein of unknown function DUF308, membrane YE3696 b868d64d7c8a5df793525fe129f9e5f4 190 PANTHER PTHR34989 1 190 4.8E-36 T 22-04-2016 YE3696 b868d64d7c8a5df793525fe129f9e5f4 190 PANTHER PTHR34989:SF1 1 190 4.8E-36 T 22-04-2016 YE2637 2d4769d47ad7269f79a6b5d92523fccb 179 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 5 179 3.2E-58 T 22-04-2016 IPR018636 Protein of unknown function DUF2058 YE0781 0557f2ea75fa030d4ccc6de6a37fc5c0 853 Pfam PF13953 PapC C-terminal domain 767 824 1.6E-16 T 22-04-2016 IPR025949 PapC-like, C-terminal domain YE0781 0557f2ea75fa030d4ccc6de6a37fc5c0 853 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 323 333 - T 22-04-2016 IPR018030 Fimbrial membrane usher, conserved site YE0781 0557f2ea75fa030d4ccc6de6a37fc5c0 853 PANTHER PTHR30451 10 844 0.0 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YE0781 0557f2ea75fa030d4ccc6de6a37fc5c0 853 Pfam PF13954 PapC N-terminal domain 46 189 1.2E-39 T 22-04-2016 IPR025885 PapC, N-terminal domain GO:0005515 YE0781 0557f2ea75fa030d4ccc6de6a37fc5c0 853 Pfam PF00577 Outer membrane usher protein 208 756 5.7E-186 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YE0781 0557f2ea75fa030d4ccc6de6a37fc5c0 853 PANTHER PTHR30451:SF10 10 844 0.0 T 22-04-2016 YE0781 0557f2ea75fa030d4ccc6de6a37fc5c0 853 SUPERFAMILY SSF141729 44 165 4.71E-31 T 22-04-2016 YE3106 6cdd023512a1046956394b3d52431fc2 427 Pfam PF10797 Protein of unknown function 8 423 4.4E-143 T 22-04-2016 IPR019733 Uncharacterised protein family YhfT YE3231 07788092031654b1513a7f60ddabb2f0 180 PANTHER PTHR23418 7 178 4.1E-30 T 22-04-2016 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|UniPathway: UPA00904 YE3231 07788092031654b1513a7f60ddabb2f0 180 SUPERFAMILY SSF51182 1 179 1.03E-41 T 22-04-2016 IPR011051 RmlC-like cupin domain YE3231 07788092031654b1513a7f60ddabb2f0 180 Pfam PF03079 ARD/ARD' family 5 165 1.7E-32 T 22-04-2016 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|UniPathway: UPA00904 YE3231 07788092031654b1513a7f60ddabb2f0 180 Hamap MF_01682 Acireductone dioxygenase [mtnD]. 1 172 37.828 T 22-04-2016 IPR023956 Acireductone dioxygenase ARD, bacteria GO:0005506|GO:0010308|GO:0010309|GO:0016151|GO:0019284|GO:0055114 KEGG: 00270+1.13.11.53+1.13.11.54|MetaCyc: PWY-4361|MetaCyc: PWY-5389|UniPathway: UPA00904 YE3231 07788092031654b1513a7f60ddabb2f0 180 Gene3D G3DSA:2.60.120.10 5 179 4.1E-57 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YE1845 76ab55df2c2f2fe1622fc496e78eedd6 281 PANTHER PTHR22911 7 277 9.2E-61 T 22-04-2016 YE1845 76ab55df2c2f2fe1622fc496e78eedd6 281 SUPERFAMILY SSF103481 39 137 8.24E-13 T 22-04-2016 YE1845 76ab55df2c2f2fe1622fc496e78eedd6 281 PANTHER PTHR22911:SF61 7 277 9.2E-61 T 22-04-2016 YE1845 76ab55df2c2f2fe1622fc496e78eedd6 281 Pfam PF00892 EamA-like transporter family 144 278 2.9E-14 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YE1845 76ab55df2c2f2fe1622fc496e78eedd6 281 SUPERFAMILY SSF103481 185 279 6.54E-15 T 22-04-2016 YE2194 4998ac26bac6dc4277366cae68754d75 184 PANTHER PTHR11592:SF40 1 183 2.3E-92 T 22-04-2016 YE2194 4998ac26bac6dc4277366cae68754d75 184 SUPERFAMILY SSF52833 4 182 2.71E-55 T 22-04-2016 IPR012336 Thioredoxin-like fold YE2194 4998ac26bac6dc4277366cae68754d75 184 PIRSF PIRSF000303 1 184 1.8E-63 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 YE2194 4998ac26bac6dc4277366cae68754d75 184 ProSitePatterns PS00460 Glutathione peroxidases active site. 25 40 - T 22-04-2016 IPR029759 Glutathione peroxidase active site YE2194 4998ac26bac6dc4277366cae68754d75 184 Gene3D G3DSA:3.40.30.10 4 182 7.2E-67 T 22-04-2016 IPR012336 Thioredoxin-like fold YE2194 4998ac26bac6dc4277366cae68754d75 184 Pfam PF00255 Glutathione peroxidase 5 111 3.6E-40 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 YE2194 4998ac26bac6dc4277366cae68754d75 184 PRINTS PR01011 Glutathione peroxidase family signature 143 152 2.6E-18 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 YE2194 4998ac26bac6dc4277366cae68754d75 184 PRINTS PR01011 Glutathione peroxidase family signature 58 74 2.6E-18 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 YE2194 4998ac26bac6dc4277366cae68754d75 184 PRINTS PR01011 Glutathione peroxidase family signature 23 40 2.6E-18 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 YE2194 4998ac26bac6dc4277366cae68754d75 184 PANTHER PTHR11592 1 183 2.3E-92 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 YE3444 eb8a6515d664bd577167690192f934bf 90 Gene3D G3DSA:1.10.3880.10 1 89 9.2E-43 T 22-04-2016 YE3444 eb8a6515d664bd577167690192f934bf 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 27.644 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 YE3444 eb8a6515d664bd577167690192f934bf 90 PIRSF PIRSF029827 1 90 2.1E-43 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 YE3444 eb8a6515d664bd577167690192f934bf 90 PANTHER PTHR36965:SF1 2 90 1.9E-55 T 22-04-2016 YE3444 eb8a6515d664bd577167690192f934bf 90 SUPERFAMILY SSF111148 1 89 1.31E-39 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 YE3444 eb8a6515d664bd577167690192f934bf 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 1.1E-39 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 YE3444 eb8a6515d664bd577167690192f934bf 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 3.0E-38 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 YE3444 eb8a6515d664bd577167690192f934bf 90 PANTHER PTHR36965 2 90 1.9E-55 T 22-04-2016 YE4054 ad9b7fb5b711a36b8bbb3627cb57e0cf 680 Gene3D G3DSA:1.10.1370.10 505 678 9.5E-144 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 YE4054 ad9b7fb5b711a36b8bbb3627cb57e0cf 680 Gene3D G3DSA:1.10.1370.10 140 349 9.5E-144 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 YE4054 ad9b7fb5b711a36b8bbb3627cb57e0cf 680 SUPERFAMILY SSF55486 1 677 8.58E-214 T 22-04-2016 YE4054 ad9b7fb5b711a36b8bbb3627cb57e0cf 680 PANTHER PTHR11804:SF8 3 678 0.0 T 22-04-2016 YE4054 ad9b7fb5b711a36b8bbb3627cb57e0cf 680 Gene3D G3DSA:1.20.1050.40 7 138 1.8E-27 T 22-04-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal YE4054 ad9b7fb5b711a36b8bbb3627cb57e0cf 680 PANTHER PTHR11804 3 678 0.0 T 22-04-2016 YE4054 ad9b7fb5b711a36b8bbb3627cb57e0cf 680 Pfam PF01432 Peptidase family M3 222 677 4.2E-168 T 22-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 YE4054 ad9b7fb5b711a36b8bbb3627cb57e0cf 680 Gene3D G3DSA:3.40.390.10 360 504 3.8E-61 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 YE1370 998f0d903fe5eb4cf40f1e102c8473c5 550 Gene3D G3DSA:3.50.50.60 228 332 1.4E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE1370 998f0d903fe5eb4cf40f1e102c8473c5 550 Gene3D G3DSA:3.50.50.60 13 157 1.4E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE1370 998f0d903fe5eb4cf40f1e102c8473c5 550 Gene3D G3DSA:3.50.50.60 394 407 1.4E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE1370 998f0d903fe5eb4cf40f1e102c8473c5 550 Gene3D G3DSA:3.50.50.60 478 544 1.4E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE1370 998f0d903fe5eb4cf40f1e102c8473c5 550 PANTHER PTHR11552:SF139 14 53 5.0E-60 T 22-04-2016 YE1370 998f0d903fe5eb4cf40f1e102c8473c5 550 PANTHER PTHR11552:SF139 76 545 5.0E-60 T 22-04-2016 YE1370 998f0d903fe5eb4cf40f1e102c8473c5 550 PANTHER PTHR11552 14 53 5.0E-60 T 22-04-2016 YE1370 998f0d903fe5eb4cf40f1e102c8473c5 550 PANTHER PTHR11552 76 545 5.0E-60 T 22-04-2016 YE1370 998f0d903fe5eb4cf40f1e102c8473c5 550 SUPERFAMILY SSF51905 12 334 4.05E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE1370 998f0d903fe5eb4cf40f1e102c8473c5 550 SUPERFAMILY SSF51905 487 547 4.05E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE1370 998f0d903fe5eb4cf40f1e102c8473c5 550 SUPERFAMILY SSF54373 416 462 1.88E-6 T 22-04-2016 YE1370 998f0d903fe5eb4cf40f1e102c8473c5 550 Pfam PF05199 GMC oxidoreductase 419 539 1.6E-19 T 22-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 YE0380 8ed6b93c3472576436ba3ceadb70c7c0 334 PANTHER PTHR10264 4 156 9.8E-121 T 22-04-2016 IPR001972 Stomatin family GO:0016020 YE0380 8ed6b93c3472576436ba3ceadb70c7c0 334 PANTHER PTHR10264 194 332 9.8E-121 T 22-04-2016 IPR001972 Stomatin family GO:0016020 YE0380 8ed6b93c3472576436ba3ceadb70c7c0 334 TIGRFAM TIGR01932 hflC: HflC protein 1 325 2.3E-139 T 22-04-2016 IPR010200 HflC GO:0016021|GO:0052547 YE0380 8ed6b93c3472576436ba3ceadb70c7c0 334 PANTHER PTHR10264:SF80 4 156 9.8E-121 T 22-04-2016 YE0380 8ed6b93c3472576436ba3ceadb70c7c0 334 PANTHER PTHR10264:SF80 194 332 9.8E-121 T 22-04-2016 YE0380 8ed6b93c3472576436ba3ceadb70c7c0 334 Gene3D G3DSA:3.40.50.1010 307 324 7.6E-4 T 22-04-2016 IPR029060 PIN domain-like YE0380 8ed6b93c3472576436ba3ceadb70c7c0 334 Gene3D G3DSA:3.40.50.1010 164 182 7.6E-4 T 22-04-2016 IPR029060 PIN domain-like YE0380 8ed6b93c3472576436ba3ceadb70c7c0 334 Pfam PF01145 SPFH domain / Band 7 family 22 241 2.0E-34 T 22-04-2016 IPR001107 Band 7 domain YE0380 8ed6b93c3472576436ba3ceadb70c7c0 334 SUPERFAMILY SSF117892 56 156 1.96E-22 T 22-04-2016 IPR001107 Band 7 domain YE0380 8ed6b93c3472576436ba3ceadb70c7c0 334 SUPERFAMILY SSF117892 194 231 1.96E-22 T 22-04-2016 IPR001107 Band 7 domain YE0380 8ed6b93c3472576436ba3ceadb70c7c0 334 SMART SM00244 18 225 1.3E-41 T 22-04-2016 IPR001107 Band 7 domain YE0380 8ed6b93c3472576436ba3ceadb70c7c0 334 PIRSF PIRSF005651 1 334 7.2E-107 T 22-04-2016 IPR010200 HflC GO:0016021|GO:0052547 YE3766 04119d4d13c93cbc729dc94e6390454f 311 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 38.365 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 YE3766 04119d4d13c93cbc729dc94e6390454f 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 3.6E-36 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 YE3766 04119d4d13c93cbc729dc94e6390454f 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 3.6E-36 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 YE3766 04119d4d13c93cbc729dc94e6390454f 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 3.6E-36 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 YE3766 04119d4d13c93cbc729dc94e6390454f 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 3.6E-36 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 YE3766 04119d4d13c93cbc729dc94e6390454f 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 3.6E-36 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 YE3766 04119d4d13c93cbc729dc94e6390454f 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 3.6E-36 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 YE3766 04119d4d13c93cbc729dc94e6390454f 311 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 2.2E-28 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 YE3766 04119d4d13c93cbc729dc94e6390454f 311 PANTHER PTHR11405:SF16 1 305 3.5E-143 T 22-04-2016 YE3766 04119d4d13c93cbc729dc94e6390454f 311 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 3.1E-44 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 YE3766 04119d4d13c93cbc729dc94e6390454f 311 Gene3D G3DSA:3.40.50.1370 147 292 7.7E-54 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YE3766 04119d4d13c93cbc729dc94e6390454f 311 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YE3766 04119d4d13c93cbc729dc94e6390454f 311 SUPERFAMILY SSF53671 3 306 7.33E-99 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YE3766 04119d4d13c93cbc729dc94e6390454f 311 PANTHER PTHR11405 1 305 3.5E-143 T 22-04-2016 YE3766 04119d4d13c93cbc729dc94e6390454f 311 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 1.9E-119 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 YE3766 04119d4d13c93cbc729dc94e6390454f 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 4.6E-25 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YE3766 04119d4d13c93cbc729dc94e6390454f 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 4.6E-25 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YE3766 04119d4d13c93cbc729dc94e6390454f 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 4.6E-25 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YE3766 04119d4d13c93cbc729dc94e6390454f 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 4.6E-25 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YE3766 04119d4d13c93cbc729dc94e6390454f 311 Gene3D G3DSA:3.40.50.1370 8 146 5.6E-52 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 YE2688 54808b38617fd276f27cf75a7419596f 183 PANTHER PTHR37625:SF2 10 170 1.4E-62 T 22-04-2016 YE2688 54808b38617fd276f27cf75a7419596f 183 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 18 149 3.9E-39 T 22-04-2016 IPR017734 Type VI secretion system, lipoprotein SciN YE2688 54808b38617fd276f27cf75a7419596f 183 PANTHER PTHR37625 10 170 1.4E-62 T 22-04-2016 YE2688 54808b38617fd276f27cf75a7419596f 183 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 27 150 6.3E-31 T 22-04-2016 IPR017734 Type VI secretion system, lipoprotein SciN YE1111 683a2c962f42dcb799bcce4639f24270 343 PANTHER PTHR33420 205 343 6.0E-21 T 22-04-2016 YE1111 683a2c962f42dcb799bcce4639f24270 343 Gene3D G3DSA:2.60.40.1090 206 343 2.7E-26 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YE1111 683a2c962f42dcb799bcce4639f24270 343 SUPERFAMILY SSF49401 206 343 1.09E-24 T 22-04-2016 IPR008966 Adhesion domain YE1111 683a2c962f42dcb799bcce4639f24270 343 Pfam PF00419 Fimbrial protein 198 343 2.4E-16 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YE3454 ecefd709366d8b4fc7658b493792c359 800 Pfam PF04829 Pre-toxin domain with VENN motif 534 584 5.8E-24 T 22-04-2016 IPR006914 VENN motif-containing domain YE3454 ecefd709366d8b4fc7658b493792c359 800 Pfam PF13332 Haemagluttinin repeat 43 177 5.8E-38 T 22-04-2016 IPR025157 Haemagluttinin repeat YE2142 ce64ac20c4be9fef7396861d960778df 370 PANTHER PTHR30605:SF2 1 370 2.3E-266 T 22-04-2016 YE2142 ce64ac20c4be9fef7396861d960778df 370 Pfam PF03702 Uncharacterised protein family (UPF0075) 5 366 3.3E-162 T 22-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 YE2142 ce64ac20c4be9fef7396861d960778df 370 Gene3D G3DSA:3.30.420.40 5 196 3.1E-72 T 22-04-2016 YE2142 ce64ac20c4be9fef7396861d960778df 370 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 4 367 41.019 T 22-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 YE2142 ce64ac20c4be9fef7396861d960778df 370 SUPERFAMILY SSF53067 66 111 3.37E-26 T 22-04-2016 YE2142 ce64ac20c4be9fef7396861d960778df 370 SUPERFAMILY SSF53067 6 36 3.37E-26 T 22-04-2016 YE2142 ce64ac20c4be9fef7396861d960778df 370 SUPERFAMILY SSF53067 143 341 3.37E-26 T 22-04-2016 YE2142 ce64ac20c4be9fef7396861d960778df 370 PANTHER PTHR30605 1 370 2.3E-266 T 22-04-2016 YE0715 a599f5eb9a240a3b33900fffa4f7c72b 308 SMART SM00382 30 213 1.7E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain YE0715 a599f5eb9a240a3b33900fffa4f7c72b 308 Gene3D G3DSA:3.40.50.300 3 226 9.1E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0715 a599f5eb9a240a3b33900fffa4f7c72b 308 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE0715 a599f5eb9a240a3b33900fffa4f7c72b 308 SUPERFAMILY SSF52540 3 232 9.06E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0715 a599f5eb9a240a3b33900fffa4f7c72b 308 PANTHER PTHR24220:SF305 6 301 5.8E-186 T 22-04-2016 YE0715 a599f5eb9a240a3b33900fffa4f7c72b 308 Pfam PF00005 ABC transporter 21 165 2.2E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE0715 a599f5eb9a240a3b33900fffa4f7c72b 308 PANTHER PTHR24220 6 301 5.8E-186 T 22-04-2016 YE2659 e1fa0f762df2c6c14bcbc31a71e1ce2a 343 PANTHER PTHR30006:SF2 23 341 1.7E-114 T 22-04-2016 YE2659 e1fa0f762df2c6c14bcbc31a71e1ce2a 343 Gene3D G3DSA:3.40.190.10 130 268 2.6E-48 T 22-04-2016 YE2659 e1fa0f762df2c6c14bcbc31a71e1ce2a 343 SUPERFAMILY SSF53850 24 328 4.25E-70 T 22-04-2016 YE2659 e1fa0f762df2c6c14bcbc31a71e1ce2a 343 PANTHER PTHR30006 23 341 1.7E-114 T 22-04-2016 YE2659 e1fa0f762df2c6c14bcbc31a71e1ce2a 343 PIRSF PIRSF002825 1 340 3.3E-68 T 22-04-2016 IPR026045 Ferric binding protein YE2659 e1fa0f762df2c6c14bcbc31a71e1ce2a 343 Gene3D G3DSA:3.40.190.10 2 123 1.2E-33 T 22-04-2016 YE2659 e1fa0f762df2c6c14bcbc31a71e1ce2a 343 Gene3D G3DSA:3.40.190.10 269 323 1.2E-33 T 22-04-2016 YE2659 e1fa0f762df2c6c14bcbc31a71e1ce2a 343 Pfam PF13343 Bacterial extracellular solute-binding protein 76 284 2.2E-31 T 22-04-2016 YE3399 af89b9116274b3f0a7159daf9e83c925 198 PIRSF PIRSF006806 7 195 8.5E-41 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase YE3399 af89b9116274b3f0a7159daf9e83c925 198 PANTHER PTHR23407:SF1 4 198 2.0E-71 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase YE3399 af89b9116274b3f0a7159daf9e83c925 198 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 11 192 1.8E-54 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase YE3399 af89b9116274b3f0a7159daf9e83c925 198 Gene3D G3DSA:3.40.50.10420 11 197 5.9E-59 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain YE3399 af89b9116274b3f0a7159daf9e83c925 198 PANTHER PTHR23407 4 198 2.0E-71 T 22-04-2016 YE3399 af89b9116274b3f0a7159daf9e83c925 198 SUPERFAMILY SSF100950 10 198 2.09E-57 T 22-04-2016 YE3399 af89b9116274b3f0a7159daf9e83c925 198 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 11 192 9.7E-50 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase YE1706 0159223bb03a7ab3058bcfd1e737fe97 180 PANTHER PTHR35602 1 180 2.6E-139 T 22-04-2016 YE1706 0159223bb03a7ab3058bcfd1e737fe97 180 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 177 6.3E-69 T 22-04-2016 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA YE1706 0159223bb03a7ab3058bcfd1e737fe97 180 SUPERFAMILY SSF53474 1 176 9.87E-7 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE1706 0159223bb03a7ab3058bcfd1e737fe97 180 Gene3D G3DSA:3.40.50.1820 2 77 6.3E-4 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE1706 0159223bb03a7ab3058bcfd1e737fe97 180 Hamap MF_01047 UPF0227 protein YcfP [ycfP]. 1 178 51.198 T 22-04-2016 IPR022987 Uncharacterised protein family UPF0227 YE1706 0159223bb03a7ab3058bcfd1e737fe97 180 PANTHER PTHR35602:SF2 1 180 2.6E-139 T 22-04-2016 YE3571 e7641ecf10d272278714f0304df3b20f 345 SUPERFAMILY SSF158544 102 116 1.36E-22 T 22-04-2016 YE3571 e7641ecf10d272278714f0304df3b20f 345 PIRSF PIRSF002786 1 345 4.3E-60 T 22-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 YE3571 e7641ecf10d272278714f0304df3b20f 345 Gene3D G3DSA:1.10.40.60 238 303 2.2E-20 T 22-04-2016 YE3571 e7641ecf10d272278714f0304df3b20f 345 PANTHER PTHR38831:SF1 5 115 3.7E-36 T 22-04-2016 YE3571 e7641ecf10d272278714f0304df3b20f 345 PANTHER PTHR38831:SF1 138 345 3.7E-36 T 22-04-2016 YE3571 e7641ecf10d272278714f0304df3b20f 345 SUPERFAMILY SSF158544 237 303 6.54E-18 T 22-04-2016 YE3571 e7641ecf10d272278714f0304df3b20f 345 SUPERFAMILY SSF158544 143 235 1.36E-22 T 22-04-2016 YE3571 e7641ecf10d272278714f0304df3b20f 345 SUPERFAMILY SSF54523 37 100 8.95E-24 T 22-04-2016 YE3571 e7641ecf10d272278714f0304df3b20f 345 SUPERFAMILY SSF54523 304 342 8.95E-24 T 22-04-2016 YE3571 e7641ecf10d272278714f0304df3b20f 345 PANTHER PTHR38831 5 115 3.7E-36 T 22-04-2016 YE3571 e7641ecf10d272278714f0304df3b20f 345 PANTHER PTHR38831 138 345 3.7E-36 T 22-04-2016 YE3571 e7641ecf10d272278714f0304df3b20f 345 Gene3D G3DSA:3.30.1300.30 305 342 4.5E-16 T 22-04-2016 YE3571 e7641ecf10d272278714f0304df3b20f 345 Gene3D G3DSA:3.30.1300.30 28 98 4.5E-16 T 22-04-2016 YE3571 e7641ecf10d272278714f0304df3b20f 345 Gene3D G3DSA:1.10.40.60 100 236 1.7E-29 T 22-04-2016 YE3571 e7641ecf10d272278714f0304df3b20f 345 Pfam PF03934 Type II secretion system (T2SS), protein K 33 336 4.3E-79 T 22-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 YE2112 4da893706a9a2d988153c9561db46218 323 PANTHER PTHR13794 4 323 5.6E-137 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 YE2112 4da893706a9a2d988153c9561db46218 323 SMART SM00922 130 223 1.3E-17 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal YE2112 4da893706a9a2d988153c9561db46218 323 SUPERFAMILY SSF54826 3 110 7.46E-27 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YE2112 4da893706a9a2d988153c9561db46218 323 SUPERFAMILY SSF51604 119 319 5.9E-52 T 22-04-2016 IPR029065 Enolase C-terminal domain-like YE2112 4da893706a9a2d988153c9561db46218 323 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 2 110 1.1E-15 T 22-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain YE2112 4da893706a9a2d988153c9561db46218 323 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 173 204 - T 22-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 YE2112 4da893706a9a2d988153c9561db46218 323 PANTHER PTHR13794:SF60 4 323 5.6E-137 T 22-04-2016 YE2112 4da893706a9a2d988153c9561db46218 323 Gene3D G3DSA:3.20.20.120 119 319 1.5E-60 T 22-04-2016 IPR029065 Enolase C-terminal domain-like YE2112 4da893706a9a2d988153c9561db46218 323 Pfam PF13378 Enolase C-terminal domain-like 139 320 1.1E-24 T 22-04-2016 IPR029065 Enolase C-terminal domain-like YE2112 4da893706a9a2d988153c9561db46218 323 Gene3D G3DSA:3.30.390.10 1 100 4.2E-40 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 YE2931 d5d376f7f75164d1d9c41d286b7664bb 168 PANTHER PTHR30128:SF18 46 168 7.4E-65 T 22-04-2016 YE2931 d5d376f7f75164d1d9c41d286b7664bb 168 PRINTS PR01021 OMPA domain signature 98 113 2.9E-17 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YE2931 d5d376f7f75164d1d9c41d286b7664bb 168 PRINTS PR01021 OMPA domain signature 68 90 2.9E-17 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YE2931 d5d376f7f75164d1d9c41d286b7664bb 168 PRINTS PR01021 OMPA domain signature 113 129 2.9E-17 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YE2931 d5d376f7f75164d1d9c41d286b7664bb 168 Pfam PF00691 OmpA family 67 162 5.0E-21 T 22-04-2016 IPR006665 OmpA-like domain YE2931 d5d376f7f75164d1d9c41d286b7664bb 168 SUPERFAMILY SSF103088 56 167 2.22E-34 T 22-04-2016 IPR006665 OmpA-like domain YE2931 d5d376f7f75164d1d9c41d286b7664bb 168 ProSitePatterns PS01068 OmpA-like domain. 100 144 - T 22-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 YE2931 d5d376f7f75164d1d9c41d286b7664bb 168 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 66 168 3.9E-46 T 22-04-2016 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 YE2931 d5d376f7f75164d1d9c41d286b7664bb 168 PANTHER PTHR30128 46 168 7.4E-65 T 22-04-2016 YE2931 d5d376f7f75164d1d9c41d286b7664bb 168 Gene3D G3DSA:3.30.1330.60 64 167 5.1E-34 T 22-04-2016 IPR006665 OmpA-like domain YE0902 6182535a1a8873a8201c78f16503554b 115 Gene3D G3DSA:3.10.129.10 15 97 4.0E-14 T 22-04-2016 IPR029069 HotDog domain YE0902 6182535a1a8873a8201c78f16503554b 115 SUPERFAMILY SSF54637 18 105 1.08E-14 T 22-04-2016 IPR029069 HotDog domain YE0902 6182535a1a8873a8201c78f16503554b 115 PIRSF PIRSF030962 1 115 1.2E-34 T 22-04-2016 IPR016962 Dehydrase, ECs4332, predicted YE0902 6182535a1a8873a8201c78f16503554b 115 Pfam PF07977 FabA-like domain 26 93 1.0E-5 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 YE1961 32c8e63c6e51ce3659c72289536dac08 109 Gene3D G3DSA:2.60.120.10 13 98 3.3E-5 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YE1961 32c8e63c6e51ce3659c72289536dac08 109 SUPERFAMILY SSF51182 27 107 1.29E-7 T 22-04-2016 IPR011051 RmlC-like cupin domain YE2271 71c1faa60b584bc85eb8b3357c1fb313 256 Gene3D G3DSA:2.40.160.20 163 234 1.6E-4 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YE2271 71c1faa60b584bc85eb8b3357c1fb313 256 SUPERFAMILY SSF56935 31 255 5.13E-5 T 22-04-2016 YE2271 71c1faa60b584bc85eb8b3357c1fb313 256 Pfam PF06629 MltA-interacting protein MipA 35 255 4.8E-55 T 22-04-2016 IPR010583 MltA-interacting MipA YE2271 71c1faa60b584bc85eb8b3357c1fb313 256 PANTHER PTHR38776 2 255 8.2E-90 T 22-04-2016 YE0652 457fa36ebbf8f1746acaba9fde4da7d4 476 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 7 472 61.997 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YE0652 457fa36ebbf8f1746acaba9fde4da7d4 476 PANTHER PTHR11670 333 475 6.3E-274 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YE0652 457fa36ebbf8f1746acaba9fde4da7d4 476 PANTHER PTHR11670 9 313 6.3E-274 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YE0652 457fa36ebbf8f1746acaba9fde4da7d4 476 ProSitePatterns PS00450 Aconitase family signature 1. 345 361 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YE0652 457fa36ebbf8f1746acaba9fde4da7d4 476 Gene3D G3DSA:3.30.499.10 4 157 1.0E-24 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YE0652 457fa36ebbf8f1746acaba9fde4da7d4 476 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 8 471 5.2E-268 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YE0652 457fa36ebbf8f1746acaba9fde4da7d4 476 SUPERFAMILY SSF53732 4 471 1.02E-169 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YE0652 457fa36ebbf8f1746acaba9fde4da7d4 476 Gene3D G3DSA:3.30.499.10 341 474 4.7E-63 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YE0652 457fa36ebbf8f1746acaba9fde4da7d4 476 Pfam PF00330 Aconitase family (aconitate hydratase) 14 463 1.0E-157 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YE0652 457fa36ebbf8f1746acaba9fde4da7d4 476 PANTHER PTHR11670:SF38 333 475 6.3E-274 T 22-04-2016 YE0652 457fa36ebbf8f1746acaba9fde4da7d4 476 PANTHER PTHR11670:SF38 9 313 6.3E-274 T 22-04-2016 YE0652 457fa36ebbf8f1746acaba9fde4da7d4 476 ProSitePatterns PS01244 Aconitase family signature 2. 405 418 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YE0652 457fa36ebbf8f1746acaba9fde4da7d4 476 Gene3D G3DSA:3.40.1060.10 158 295 1.3E-40 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YE0652 457fa36ebbf8f1746acaba9fde4da7d4 476 PRINTS PR00415 Aconitase family signature 139 154 3.3E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YE0652 457fa36ebbf8f1746acaba9fde4da7d4 476 PRINTS PR00415 Aconitase family signature 349 360 3.3E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YE0652 457fa36ebbf8f1746acaba9fde4da7d4 476 PRINTS PR00415 Aconitase family signature 88 101 3.3E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YE0652 457fa36ebbf8f1746acaba9fde4da7d4 476 PRINTS PR00415 Aconitase family signature 215 228 3.3E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YE0652 457fa36ebbf8f1746acaba9fde4da7d4 476 PRINTS PR00415 Aconitase family signature 292 306 3.3E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YE0652 457fa36ebbf8f1746acaba9fde4da7d4 476 PRINTS PR00415 Aconitase family signature 201 214 3.3E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YE0652 457fa36ebbf8f1746acaba9fde4da7d4 476 PRINTS PR00415 Aconitase family signature 114 122 3.3E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YE0652 457fa36ebbf8f1746acaba9fde4da7d4 476 PRINTS PR00415 Aconitase family signature 125 138 3.3E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YE0652 457fa36ebbf8f1746acaba9fde4da7d4 476 PRINTS PR00415 Aconitase family signature 405 418 3.3E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 YE2423 8ad1c9a615baaa0d68c92a792dc1309f 294 Gene3D G3DSA:3.20.20.190 15 293 1.1E-44 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 YE2423 8ad1c9a615baaa0d68c92a792dc1309f 294 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 26 154 1.5E-13 T 22-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 YE2423 8ad1c9a615baaa0d68c92a792dc1309f 294 PANTHER PTHR23344 21 294 2.7E-103 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 YE2423 8ad1c9a615baaa0d68c92a792dc1309f 294 PANTHER PTHR23344:SF2 21 294 2.7E-103 T 22-04-2016 YE2423 8ad1c9a615baaa0d68c92a792dc1309f 294 SUPERFAMILY SSF51695 21 293 1.18E-41 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 YE4028 4a32f45ef143969751f6400da9ae2873 633 Pfam PF09863 Uncharacterized protein conserved in bacteria (DUF2090) 321 629 1.9E-143 T 22-04-2016 IPR018659 Protein of unknown function DUF2090 YE4028 4a32f45ef143969751f6400da9ae2873 633 Gene3D G3DSA:3.40.1190.20 3 330 1.6E-83 T 22-04-2016 IPR029056 Ribokinase-like YE4028 4a32f45ef143969751f6400da9ae2873 633 SUPERFAMILY SSF53613 3 325 2.18E-70 T 22-04-2016 IPR029056 Ribokinase-like YE4028 4a32f45ef143969751f6400da9ae2873 633 PANTHER PTHR10584:SF194 2 350 8.0E-194 T 22-04-2016 YE4028 4a32f45ef143969751f6400da9ae2873 633 TIGRFAM TIGR04382 myo_inos_iolC_N: 5-dehydro-2-deoxygluconokinase 2 326 2.1E-125 T 22-04-2016 IPR030830 5-dehydro-2-deoxygluconokinase KEGG: 00562+2.7.1.92|UniPathway: UPA00076 YE4028 4a32f45ef143969751f6400da9ae2873 633 PANTHER PTHR10584 2 350 8.0E-194 T 22-04-2016 YE4028 4a32f45ef143969751f6400da9ae2873 633 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 270 283 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 YE4028 4a32f45ef143969751f6400da9ae2873 633 Pfam PF00294 pfkB family carbohydrate kinase 3 318 3.7E-47 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB YE0929 dbe0a16ad3c1c681f35ad919f14232b7 78 SUPERFAMILY SSF52833 1 72 1.54E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold YE0929 dbe0a16ad3c1c681f35ad919f14232b7 78 PANTHER PTHR34386:SF3 1 75 2.3E-40 T 22-04-2016 YE0929 dbe0a16ad3c1c681f35ad919f14232b7 78 Pfam PF00462 Glutaredoxin 3 61 2.9E-16 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 YE0929 dbe0a16ad3c1c681f35ad919f14232b7 78 PANTHER PTHR34386 1 75 2.3E-40 T 22-04-2016 YE0929 dbe0a16ad3c1c681f35ad919f14232b7 78 Gene3D G3DSA:3.40.30.10 1 75 2.2E-29 T 22-04-2016 IPR012336 Thioredoxin-like fold YE0929 dbe0a16ad3c1c681f35ad919f14232b7 78 TIGRFAM TIGR02194 GlrX_NrdH: glutaredoxin-like protein NrdH 3 73 2.2E-35 T 22-04-2016 IPR011909 Glutaredoxin-like protein NrdH GO:0045454 YE4177 dff9e59cbc0d0387bf58b5f431bb329c 548 Pfam PF14849 YidC periplasmic domain 61 342 4.8E-90 T 22-04-2016 IPR028053 Membrane insertase YidC, N-terminal YE4177 dff9e59cbc0d0387bf58b5f431bb329c 548 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 351 4.7E-119 T 22-04-2016 IPR028053 Membrane insertase YidC, N-terminal YE4177 dff9e59cbc0d0387bf58b5f431bb329c 548 PRINTS PR01900 YidC translocation/secretion protein signature 487 511 1.5E-29 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 YE4177 dff9e59cbc0d0387bf58b5f431bb329c 548 PRINTS PR01900 YidC translocation/secretion protein signature 467 482 1.5E-29 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 YE4177 dff9e59cbc0d0387bf58b5f431bb329c 548 PRINTS PR01900 YidC translocation/secretion protein signature 338 354 1.5E-29 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 YE4177 dff9e59cbc0d0387bf58b5f431bb329c 548 PANTHER PTHR12428 165 548 1.1E-155 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 YE4177 dff9e59cbc0d0387bf58b5f431bb329c 548 Pfam PF02096 60Kd inner membrane protein 353 532 2.6E-60 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 YE4177 dff9e59cbc0d0387bf58b5f431bb329c 548 PRINTS PR00701 60kDa inner membrane protein signature 498 521 9.6E-106 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 YE4177 dff9e59cbc0d0387bf58b5f431bb329c 548 PRINTS PR00701 60kDa inner membrane protein signature 414 437 9.6E-106 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 YE4177 dff9e59cbc0d0387bf58b5f431bb329c 548 PRINTS PR00701 60kDa inner membrane protein signature 217 235 9.6E-106 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 YE4177 dff9e59cbc0d0387bf58b5f431bb329c 548 PRINTS PR00701 60kDa inner membrane protein signature 2 23 9.6E-106 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 YE4177 dff9e59cbc0d0387bf58b5f431bb329c 548 PRINTS PR00701 60kDa inner membrane protein signature 66 87 9.6E-106 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 YE4177 dff9e59cbc0d0387bf58b5f431bb329c 548 PRINTS PR00701 60kDa inner membrane protein signature 461 483 9.6E-106 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 YE4177 dff9e59cbc0d0387bf58b5f431bb329c 548 PRINTS PR00701 60kDa inner membrane protein signature 250 265 9.6E-106 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 YE4177 dff9e59cbc0d0387bf58b5f431bb329c 548 PRINTS PR00701 60kDa inner membrane protein signature 158 178 9.6E-106 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 YE4177 dff9e59cbc0d0387bf58b5f431bb329c 548 PRINTS PR00701 60kDa inner membrane protein signature 323 343 9.6E-106 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 YE4177 dff9e59cbc0d0387bf58b5f431bb329c 548 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 534 26.541 T 22-04-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 YE4177 dff9e59cbc0d0387bf58b5f431bb329c 548 PANTHER PTHR12428:SF14 165 548 1.1E-155 T 22-04-2016 YE4177 dff9e59cbc0d0387bf58b5f431bb329c 548 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 352 532 1.8E-69 T 22-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal YE0662 30145bda1d015e8be62e98c983381032 148 Pfam PF06610 L-alanine exporter 6 144 2.2E-71 T 22-04-2016 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 YE0662 30145bda1d015e8be62e98c983381032 148 Hamap MF_00914 L-alanine exporter AlaE [alaE]. 3 147 35.415 T 22-04-2016 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 YE0662 30145bda1d015e8be62e98c983381032 148 ProDom PD090021 MEMBRANE YGAW TRANSMEMBRANE INNER VV2263 Y3636 VC1828 VP1070 11 144 2.0E-64 T 22-04-2016 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 YE3806 907403616f141a0d5937ad0a770bdd41 639 Gene3D G3DSA:3.30.70.270 227 388 7.9E-19 T 22-04-2016 YE3806 907403616f141a0d5937ad0a770bdd41 639 PANTHER PTHR33121:SF16 31 38 9.8E-16 T 22-04-2016 YE3806 907403616f141a0d5937ad0a770bdd41 639 PANTHER PTHR33121:SF16 345 627 9.8E-16 T 22-04-2016 YE3806 907403616f141a0d5937ad0a770bdd41 639 SUPERFAMILY SSF55073 230 383 1.45E-17 T 22-04-2016 IPR029787 Nucleotide cyclase YE3806 907403616f141a0d5937ad0a770bdd41 639 SMART SM00267 213 382 1.3E-14 T 22-04-2016 IPR000160 GGDEF domain YE3806 907403616f141a0d5937ad0a770bdd41 639 Gene3D G3DSA:3.20.20.450 395 628 1.7E-30 T 22-04-2016 IPR001633 EAL domain YE3806 907403616f141a0d5937ad0a770bdd41 639 SUPERFAMILY SSF141868 399 630 1.57E-33 T 22-04-2016 IPR001633 EAL domain YE3806 907403616f141a0d5937ad0a770bdd41 639 Pfam PF17157 Gammaproteobacterial periplasmic sensor domain 33 130 5.2E-31 T 22-04-2016 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 YE3806 907403616f141a0d5937ad0a770bdd41 639 PANTHER PTHR33121 31 38 9.8E-16 T 22-04-2016 YE3806 907403616f141a0d5937ad0a770bdd41 639 PANTHER PTHR33121 345 627 9.8E-16 T 22-04-2016 YE3806 907403616f141a0d5937ad0a770bdd41 639 Pfam PF00563 EAL domain 400 627 8.8E-39 T 22-04-2016 IPR001633 EAL domain YE3806 907403616f141a0d5937ad0a770bdd41 639 Pfam PF00990 Diguanylate cyclase, GGDEF domain 224 376 6.9E-20 T 22-04-2016 IPR000160 GGDEF domain YE3806 907403616f141a0d5937ad0a770bdd41 639 SMART SM00052 392 632 3.3E-22 T 22-04-2016 IPR001633 EAL domain YE3616 320ebf1ad429b0cd56acbf0a4c889bae 327 Gene3D G3DSA:3.90.25.10 182 303 1.8E-41 T 22-04-2016 YE3616 320ebf1ad429b0cd56acbf0a4c889bae 327 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 206 2.8E-20 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 YE3616 320ebf1ad429b0cd56acbf0a4c889bae 327 Gene3D G3DSA:3.40.50.720 1 181 3.3E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3616 320ebf1ad429b0cd56acbf0a4c889bae 327 PANTHER PTHR10366 2 318 3.3E-84 T 22-04-2016 YE3616 320ebf1ad429b0cd56acbf0a4c889bae 327 SUPERFAMILY SSF51735 1 318 1.12E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3616 320ebf1ad429b0cd56acbf0a4c889bae 327 PANTHER PTHR10366:SF228 2 318 3.3E-84 T 22-04-2016 YE1762 7184b73d5e02adda858cc2571ba7aa12 204 Hamap MF_00837 Lipid A palmitoyltransferase PagP [pagP]. 3 204 41.746 T 22-04-2016 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 YE1762 7184b73d5e02adda858cc2571ba7aa12 204 SUPERFAMILY SSF56925 46 204 6.67E-79 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YE1762 7184b73d5e02adda858cc2571ba7aa12 204 Pfam PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP 57 201 1.3E-69 T 22-04-2016 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 YE1762 7184b73d5e02adda858cc2571ba7aa12 204 ProDom PD103779 CRCA ANTIMICROBIAL RESISTANCE LIPOPROTEIN RCP A PEPTIDE ACYLATION LIPID EXPORTED 56 192 3.0E-62 T 22-04-2016 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 YE1762 7184b73d5e02adda858cc2571ba7aa12 204 Gene3D G3DSA:2.40.160.20 46 204 4.7E-83 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YE0492 8ec6fa327d27b27d43fa0484532bf947 152 Pfam PF04074 Domain of unknown function (DUF386) 1 149 1.4E-43 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family YE0492 8ec6fa327d27b27d43fa0484532bf947 152 SUPERFAMILY SSF51197 1 151 1.79E-43 T 22-04-2016 YE0492 8ec6fa327d27b27d43fa0484532bf947 152 PANTHER PTHR34986:SF1 2 152 5.8E-78 T 22-04-2016 YE0492 8ec6fa327d27b27d43fa0484532bf947 152 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 152 2.9E-51 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family YE0492 8ec6fa327d27b27d43fa0484532bf947 152 PANTHER PTHR34986 2 152 5.8E-78 T 22-04-2016 YE0492 8ec6fa327d27b27d43fa0484532bf947 152 Gene3D G3DSA:2.60.120.370 1 151 5.5E-49 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family YE2920 ad97cdb2e2f5d27d0340c9082cfd2177 354 TIGRFAM TIGR02636 galM_Leloir: galactose mutarotase 19 351 3.7E-140 T 22-04-2016 IPR013458 Aldose 1-epimerase, bacterial GO:0004034|GO:0006012 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317|UniPathway: UPA00242 YE2920 ad97cdb2e2f5d27d0340c9082cfd2177 354 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 178 187 - T 22-04-2016 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317|UniPathway: UPA00242 YE2920 ad97cdb2e2f5d27d0340c9082cfd2177 354 SUPERFAMILY SSF74650 15 351 1.88E-106 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 YE2920 ad97cdb2e2f5d27d0340c9082cfd2177 354 PANTHER PTHR10091:SF0 14 354 1.2E-134 T 22-04-2016 YE2920 ad97cdb2e2f5d27d0340c9082cfd2177 354 PANTHER PTHR10091 14 354 1.2E-134 T 22-04-2016 YE2920 ad97cdb2e2f5d27d0340c9082cfd2177 354 Gene3D G3DSA:2.70.98.10 16 351 2.2E-118 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 YE2920 ad97cdb2e2f5d27d0340c9082cfd2177 354 PIRSF PIRSF005096 6 354 7.2E-121 T 22-04-2016 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317|UniPathway: UPA00242 YE2920 ad97cdb2e2f5d27d0340c9082cfd2177 354 Pfam PF01263 Aldose 1-epimerase 25 350 3.4E-84 T 22-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 YE3703 8553546e7736bd46543317a94b32bcdd 328 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 8 311 1.7E-121 T 22-04-2016 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 YE3703 8553546e7736bd46543317a94b32bcdd 328 PANTHER PTHR30238 6 326 5.7E-157 T 22-04-2016 YE3703 8553546e7736bd46543317a94b32bcdd 328 PANTHER PTHR30238:SF0 6 326 5.7E-157 T 22-04-2016 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 YE3703 8553546e7736bd46543317a94b32bcdd 328 Pfam PF03741 Integral membrane protein TerC family 81 283 1.2E-56 T 22-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 YE1642 bdbccc4404be5ddc2e8d74e06243ad64 269 PANTHER PTHR10060 1 258 8.2E-138 T 22-04-2016 IPR001130 TatD family GO:0016788 YE1642 bdbccc4404be5ddc2e8d74e06243ad64 269 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 191 207 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 YE1642 bdbccc4404be5ddc2e8d74e06243ad64 269 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 3 256 1.5E-92 T 22-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 YE1642 bdbccc4404be5ddc2e8d74e06243ad64 269 SUPERFAMILY SSF51556 1 257 1.62E-85 T 22-04-2016 IPR032466 Metal-dependent hydrolase YE1642 bdbccc4404be5ddc2e8d74e06243ad64 269 PANTHER PTHR10060:SF20 1 258 8.2E-138 T 22-04-2016 YE1642 bdbccc4404be5ddc2e8d74e06243ad64 269 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 126 136 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 YE1642 bdbccc4404be5ddc2e8d74e06243ad64 269 Pfam PF01026 TatD related DNase 4 255 3.5E-76 T 22-04-2016 IPR001130 TatD family GO:0016788 YE1642 bdbccc4404be5ddc2e8d74e06243ad64 269 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 YE1642 bdbccc4404be5ddc2e8d74e06243ad64 269 Gene3D G3DSA:3.20.20.140 2 257 3.5E-84 T 22-04-2016 YE1642 bdbccc4404be5ddc2e8d74e06243ad64 269 PIRSF PIRSF005902 1 259 1.4E-73 T 22-04-2016 IPR001130 TatD family GO:0016788 YE2853 74104f8650a0f3c3b84eaff27626f31a 326 Gene3D G3DSA:3.40.1030.10 79 318 3.1E-36 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 YE2853 74104f8650a0f3c3b84eaff27626f31a 326 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 68 1.2E-10 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain YE2853 74104f8650a0f3c3b84eaff27626f31a 326 SUPERFAMILY SSF47648 7 70 1.83E-14 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain YE2853 74104f8650a0f3c3b84eaff27626f31a 326 Gene3D G3DSA:1.20.970.10 7 69 9.0E-20 T 22-04-2016 YE2853 74104f8650a0f3c3b84eaff27626f31a 326 SUPERFAMILY SSF52418 76 317 3.3E-41 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 YE0460 47db63b899d98cef7c2a440d199af80a 437 PANTHER PTHR30061:SF14 1 435 2.8E-141 T 22-04-2016 YE0460 47db63b899d98cef7c2a440d199af80a 437 PANTHER PTHR30061 1 435 2.8E-141 T 22-04-2016 YE0460 47db63b899d98cef7c2a440d199af80a 437 SUPERFAMILY SSF53850 32 429 3.34E-79 T 22-04-2016 YE0460 47db63b899d98cef7c2a440d199af80a 437 Gene3D G3DSA:3.40.190.10 33 142 1.0E-19 T 22-04-2016 YE0460 47db63b899d98cef7c2a440d199af80a 437 Pfam PF01547 Bacterial extracellular solute-binding protein 47 340 8.1E-35 T 22-04-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 YE0460 47db63b899d98cef7c2a440d199af80a 437 Gene3D G3DSA:3.40.190.10 144 354 6.2E-50 T 22-04-2016 YE2308 8f109c23ad58b2eefdd54237c45ce412 115 PANTHER PTHR33446 19 98 1.1E-12 T 22-04-2016 YE2308 8f109c23ad58b2eefdd54237c45ce412 115 PANTHER PTHR33446:SF1 19 98 1.1E-12 T 22-04-2016 YE2308 8f109c23ad58b2eefdd54237c45ce412 115 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 44 111 1.5E-14 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 YE2308 8f109c23ad58b2eefdd54237c45ce412 115 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 43 111 3.4E-14 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 YE2308 8f109c23ad58b2eefdd54237c45ce412 115 SUPERFAMILY SSF74653 40 102 4.12E-16 T 22-04-2016 YE2308 8f109c23ad58b2eefdd54237c45ce412 115 Gene3D G3DSA:3.30.1150.10 23 111 2.2E-8 T 22-04-2016 YE2308 8f109c23ad58b2eefdd54237c45ce412 115 PRINTS PR01374 Gram-negative bacterial tonB protein signature 36 57 5.7E-12 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 YE2308 8f109c23ad58b2eefdd54237c45ce412 115 PRINTS PR01374 Gram-negative bacterial tonB protein signature 76 93 5.7E-12 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 YE2308 8f109c23ad58b2eefdd54237c45ce412 115 PRINTS PR01374 Gram-negative bacterial tonB protein signature 57 75 5.7E-12 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 YE2314 e45a5ecfc586eb8564ca688b82598ec3 86 Pfam PF08809 Phage related hypothetical protein (DUF1799) 5 80 4.2E-25 T 22-04-2016 IPR014915 Bacteriophage TLS, TfmB YE3887 4d27d78edc1cc980641c53aba9a3d94c 145 PANTHER PTHR38692:SF1 1 145 4.0E-74 T 22-04-2016 YE3887 4d27d78edc1cc980641c53aba9a3d94c 145 Pfam PF04361 Protein of unknown function (DUF494) 4 145 2.0E-52 T 22-04-2016 IPR007456 Smg YE3887 4d27d78edc1cc980641c53aba9a3d94c 145 PANTHER PTHR38692 1 145 4.0E-74 T 22-04-2016 YE3887 4d27d78edc1cc980641c53aba9a3d94c 145 Hamap MF_00598 Protein Smg [smg]. 1 145 25.527 T 22-04-2016 IPR007456 Smg YE2285 8fce8c2cf5360e1ac00633d8f2011b2c 176 PANTHER PTHR36570 1 176 2.7E-100 T 22-04-2016 YE2285 8fce8c2cf5360e1ac00633d8f2011b2c 176 PANTHER PTHR36570:SF2 1 176 2.7E-100 T 22-04-2016 YE2285 8fce8c2cf5360e1ac00633d8f2011b2c 176 SUPERFAMILY SSF158442 15 161 1.57E-45 T 22-04-2016 YE2285 8fce8c2cf5360e1ac00633d8f2011b2c 176 Gene3D G3DSA:1.20.1550.10 1 175 9.6E-70 T 22-04-2016 IPR023380 Disulphide bond formation protein DsbB-like domain YE2285 8fce8c2cf5360e1ac00633d8f2011b2c 176 Pfam PF02600 Disulfide bond formation protein DsbB 12 159 2.2E-44 T 22-04-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 YE2285 8fce8c2cf5360e1ac00633d8f2011b2c 176 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 7 167 22.414 T 22-04-2016 IPR022920 Disulphide bond formation protein DsbB YE2650 c016877e406691e545596f3c57c796cc 505 PANTHER PTHR40596 1 505 0.0 T 22-04-2016 YE2650 c016877e406691e545596f3c57c796cc 505 SUPERFAMILY SSF100950 237 503 1.6E-63 T 22-04-2016 YE2650 c016877e406691e545596f3c57c796cc 505 Gene3D G3DSA:3.40.1080.10 6 233 1.4E-103 T 22-04-2016 YE2650 c016877e406691e545596f3c57c796cc 505 PIRSF PIRSF009451 1 505 5.2E-258 T 22-04-2016 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 YE2650 c016877e406691e545596f3c57c796cc 505 Gene3D G3DSA:3.40.810.20 237 478 1.0E-78 T 22-04-2016 YE2650 c016877e406691e545596f3c57c796cc 505 TIGRFAM TIGR01584 citF: citrate lyase, alpha subunit 21 505 1.3E-239 T 22-04-2016 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 YE2650 c016877e406691e545596f3c57c796cc 505 SUPERFAMILY SSF100950 20 233 2.13E-73 T 22-04-2016 YE2650 c016877e406691e545596f3c57c796cc 505 Pfam PF04223 Citrate lyase, alpha subunit (CitF) 40 503 2.9E-255 T 22-04-2016 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 YE0753 c7104c42af9ad3d96fff4b9f0d324881 223 Pfam PF04055 Radical SAM superfamily 26 181 1.2E-8 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 YE0753 c7104c42af9ad3d96fff4b9f0d324881 223 Gene3D G3DSA:3.20.20.70 29 122 9.8E-7 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YE0753 c7104c42af9ad3d96fff4b9f0d324881 223 PIRSF PIRSF000370 1 223 4.8E-71 T 22-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 YE0753 c7104c42af9ad3d96fff4b9f0d324881 223 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 3 223 36.416 T 22-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 YE0753 c7104c42af9ad3d96fff4b9f0d324881 223 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 9 223 3.1E-111 T 22-04-2016 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 YE0753 c7104c42af9ad3d96fff4b9f0d324881 223 PANTHER PTHR11228:SF6 72 222 5.7E-60 T 22-04-2016 YE0753 c7104c42af9ad3d96fff4b9f0d324881 223 PANTHER PTHR11228:SF6 1 56 5.7E-60 T 22-04-2016 YE0753 c7104c42af9ad3d96fff4b9f0d324881 223 PANTHER PTHR11228 72 222 5.7E-60 T 22-04-2016 YE0753 c7104c42af9ad3d96fff4b9f0d324881 223 PANTHER PTHR11228 1 56 5.7E-60 T 22-04-2016 YE0753 c7104c42af9ad3d96fff4b9f0d324881 223 SUPERFAMILY SSF102114 24 117 1.44E-5 T 22-04-2016 YE0753 c7104c42af9ad3d96fff4b9f0d324881 223 Pfam PF13394 4Fe-4S single cluster domain 24 128 4.1E-13 T 22-04-2016 YE0058 6e271120ea54d592cac1904628b06142 238 SUPERFAMILY SSF55666 153 237 1.7E-25 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 YE0058 6e271120ea54d592cac1904628b06142 238 Gene3D G3DSA:3.30.230.70 9 237 1.1E-34 T 22-04-2016 IPR027408 PNPase/RNase PH domain YE0058 6e271120ea54d592cac1904628b06142 238 PANTHER PTHR11953 1 238 1.2E-88 T 22-04-2016 YE0058 6e271120ea54d592cac1904628b06142 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 2.2E-24 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 YE0058 6e271120ea54d592cac1904628b06142 238 Pfam PF03725 3' exoribonuclease family, domain 2 158 222 8.6E-10 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 YE0058 6e271120ea54d592cac1904628b06142 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 22-04-2016 IPR018336 Ribonuclease PH, conserved site YE0058 6e271120ea54d592cac1904628b06142 238 PANTHER PTHR11953:SF0 1 238 1.2E-88 T 22-04-2016 YE0058 6e271120ea54d592cac1904628b06142 238 SUPERFAMILY SSF54211 1 181 6.58E-44 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold YE0058 6e271120ea54d592cac1904628b06142 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 1.8E-110 T 22-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 YE0058 6e271120ea54d592cac1904628b06142 238 Hamap MF_00564 Ribonuclease PH [rph]. 1 237 48.618 T 22-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 YE2862 1163c072c193d98e9daaba7311899864 242 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 54 228 1.0E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE2862 1163c072c193d98e9daaba7311899864 242 PANTHER PTHR30177 1 238 9.0E-144 T 22-04-2016 YE2862 1163c072c193d98e9daaba7311899864 242 PANTHER PTHR30177:SF11 1 238 9.0E-144 T 22-04-2016 YE2862 1163c072c193d98e9daaba7311899864 242 SUPERFAMILY SSF161098 33 221 1.16E-33 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE2862 1163c072c193d98e9daaba7311899864 242 Gene3D G3DSA:1.10.3720.10 32 231 1.5E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE2539 4310c4616e9e47d24aae14f5037d1835 240 PRINTS PR01003 Flagellar assembly protein FliH signature 88 106 5.0E-78 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 YE2539 4310c4616e9e47d24aae14f5037d1835 240 PRINTS PR01003 Flagellar assembly protein FliH signature 213 238 5.0E-78 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 YE2539 4310c4616e9e47d24aae14f5037d1835 240 PRINTS PR01003 Flagellar assembly protein FliH signature 127 144 5.0E-78 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 YE2539 4310c4616e9e47d24aae14f5037d1835 240 PRINTS PR01003 Flagellar assembly protein FliH signature 107 126 5.0E-78 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 YE2539 4310c4616e9e47d24aae14f5037d1835 240 PRINTS PR01003 Flagellar assembly protein FliH signature 65 87 5.0E-78 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 YE2539 4310c4616e9e47d24aae14f5037d1835 240 PRINTS PR01003 Flagellar assembly protein FliH signature 8 27 5.0E-78 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 YE2539 4310c4616e9e47d24aae14f5037d1835 240 PRINTS PR01003 Flagellar assembly protein FliH signature 145 167 5.0E-78 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 YE2539 4310c4616e9e47d24aae14f5037d1835 240 PRINTS PR01003 Flagellar assembly protein FliH signature 168 195 5.0E-78 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 YE2539 4310c4616e9e47d24aae14f5037d1835 240 PRINTS PR01003 Flagellar assembly protein FliH signature 196 212 5.0E-78 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 YE2539 4310c4616e9e47d24aae14f5037d1835 240 PANTHER PTHR34982:SF1 40 234 2.0E-60 T 22-04-2016 YE2539 4310c4616e9e47d24aae14f5037d1835 240 Pfam PF02108 Flagellar assembly protein FliH 107 231 1.5E-39 T 22-04-2016 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE YE2539 4310c4616e9e47d24aae14f5037d1835 240 PANTHER PTHR34982 40 234 2.0E-60 T 22-04-2016 YE0739 03ce1d90bc97ba373c6c551409da491c 233 Pfam PF01048 Phosphorylase superfamily 2 226 1.4E-46 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 YE0739 03ce1d90bc97ba373c6c551409da491c 233 SUPERFAMILY SSF53167 1 227 6.81E-74 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 YE0739 03ce1d90bc97ba373c6c551409da491c 233 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 227 3.9E-115 T 22-04-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154|UniPathway: UPA00904 YE0739 03ce1d90bc97ba373c6c551409da491c 233 Gene3D G3DSA:3.40.50.1580 1 230 7.1E-76 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 YE0739 03ce1d90bc97ba373c6c551409da491c 233 PANTHER PTHR21234:SF16 1 229 4.0E-62 T 22-04-2016 YE0739 03ce1d90bc97ba373c6c551409da491c 233 PANTHER PTHR21234 1 229 4.0E-62 T 22-04-2016 IPR018017 Nucleoside phosphorylase YE0739 03ce1d90bc97ba373c6c551409da491c 233 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 229 46.745 T 22-04-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154|UniPathway: UPA00904 YE1658 ab2c0c73bdea47f03b01cd4dc516c220 134 PANTHER PTHR33653 1 134 7.4E-48 T 22-04-2016 YE1658 ab2c0c73bdea47f03b01cd4dc516c220 134 SUPERFAMILY SSF88723 1 131 2.8E-38 T 22-04-2016 IPR029060 PIN domain-like YE1658 ab2c0c73bdea47f03b01cd4dc516c220 134 Gene3D G3DSA:3.40.50.1010 1 132 1.6E-37 T 22-04-2016 IPR029060 PIN domain-like YE1658 ab2c0c73bdea47f03b01cd4dc516c220 134 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 4 128 12.913 T 22-04-2016 IPR022907 VapC family GO:0004540 YE1658 ab2c0c73bdea47f03b01cd4dc516c220 134 SMART SM00670 2 121 8.5E-6 T 22-04-2016 IPR002716 PIN domain YE1658 ab2c0c73bdea47f03b01cd4dc516c220 134 PANTHER PTHR33653:SF2 1 134 7.4E-48 T 22-04-2016 YE1658 ab2c0c73bdea47f03b01cd4dc516c220 134 Pfam PF01850 PIN domain 4 124 2.4E-17 T 22-04-2016 IPR002716 PIN domain YE2030 e6856a9f6d8ed65bd342450483201eba 92 SUPERFAMILY SSF159871 3 91 5.23E-24 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 YE2030 e6856a9f6d8ed65bd342450483201eba 92 PANTHER PTHR34156 2 92 4.7E-23 T 22-04-2016 YE2030 e6856a9f6d8ed65bd342450483201eba 92 Gene3D G3DSA:3.30.1660.10 27 90 9.0E-23 T 22-04-2016 IPR025543 Dodecin-like YE2030 e6856a9f6d8ed65bd342450483201eba 92 Pfam PF07338 Protein of unknown function (DUF1471) 38 90 8.4E-17 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 YE2094 9a26cab2ba81e57ac97b1a67bcb0ca74 76 Pfam PF04198 Putative sugar-binding domain 3 75 1.6E-20 T 22-04-2016 IPR007324 Sugar-binding domain, putative GO:0030246 YE2094 9a26cab2ba81e57ac97b1a67bcb0ca74 76 PANTHER PTHR34294 1 76 5.7E-27 T 22-04-2016 YE2094 9a26cab2ba81e57ac97b1a67bcb0ca74 76 SUPERFAMILY SSF100950 2 76 1.59E-19 T 22-04-2016 YE2094 9a26cab2ba81e57ac97b1a67bcb0ca74 76 Gene3D G3DSA:3.40.50.1360 2 76 1.6E-21 T 22-04-2016 YE2094 9a26cab2ba81e57ac97b1a67bcb0ca74 76 PANTHER PTHR34294:SF2 1 76 5.7E-27 T 22-04-2016 YE3344 cabc8669265903aff59045be7af9f81a 313 SUPERFAMILY SSF158544 201 254 7.06E-13 T 22-04-2016 YE3344 cabc8669265903aff59045be7af9f81a 313 Pfam PF03934 Type II secretion system (T2SS), protein K 82 306 4.7E-14 T 22-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 YE3344 cabc8669265903aff59045be7af9f81a 313 Gene3D G3DSA:1.10.40.60 203 252 2.3E-15 T 22-04-2016 YE1157 ec0b7b98f487c94c80ec7de8c814c486 151 PIRSF PIRSF006105 6 151 1.9E-53 T 22-04-2016 IPR005591 Nitrate reductase cytochrome c-type subunit NapB YE1157 ec0b7b98f487c94c80ec7de8c814c486 151 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 37 145 1.8E-45 T 22-04-2016 IPR005591 Nitrate reductase cytochrome c-type subunit NapB YE1157 ec0b7b98f487c94c80ec7de8c814c486 151 SUPERFAMILY SSF48695 50 146 2.74E-41 T 22-04-2016 IPR011031 Multihaem cytochrome YE1157 ec0b7b98f487c94c80ec7de8c814c486 151 PANTHER PTHR38604 7 151 1.7E-67 T 22-04-2016 YE1157 ec0b7b98f487c94c80ec7de8c814c486 151 PANTHER PTHR38604:SF1 7 151 1.7E-67 T 22-04-2016 YE1157 ec0b7b98f487c94c80ec7de8c814c486 151 Gene3D G3DSA:4.10.1020.10 64 131 8.7E-33 T 22-04-2016 IPR027406 Periplasmic nitrate reductase NapB subunit, heme binding domain YE0854 0d91f6cc87cf99aa10872eba8224963c 99 Gene3D G3DSA:1.10.260.40 7 55 1.1E-8 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE0854 0d91f6cc87cf99aa10872eba8224963c 99 SUPERFAMILY SSF47413 6 55 5.63E-8 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE0854 0d91f6cc87cf99aa10872eba8224963c 99 Pfam PF01381 Helix-turn-helix 9 53 9.1E-7 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YE0854 0d91f6cc87cf99aa10872eba8224963c 99 SMART SM00530 8 65 1.6E-4 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YE1268 72bd99fde7cd20a6aef5af07fec9cf71 655 Pfam PF01578 Cytochrome C assembly protein 89 296 1.8E-54 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 YE1268 72bd99fde7cd20a6aef5af07fec9cf71 655 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 637 1.2E-131 T 22-04-2016 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal YE1268 72bd99fde7cd20a6aef5af07fec9cf71 655 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 5.6E-58 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 YE1268 72bd99fde7cd20a6aef5af07fec9cf71 655 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 5.6E-58 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 YE1268 72bd99fde7cd20a6aef5af07fec9cf71 655 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 5.6E-58 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 YE1268 72bd99fde7cd20a6aef5af07fec9cf71 655 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 631 644 5.6E-58 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 YE1268 72bd99fde7cd20a6aef5af07fec9cf71 655 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 5.6E-58 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 YE1268 72bd99fde7cd20a6aef5af07fec9cf71 655 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 5.6E-58 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 YE1268 72bd99fde7cd20a6aef5af07fec9cf71 655 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 5.6E-58 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 YE1268 72bd99fde7cd20a6aef5af07fec9cf71 655 PANTHER PTHR30009 1 418 0.0 T 22-04-2016 YE1268 72bd99fde7cd20a6aef5af07fec9cf71 655 PANTHER PTHR30009 473 655 0.0 T 22-04-2016 YE1268 72bd99fde7cd20a6aef5af07fec9cf71 655 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 2.6E-93 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 YE1268 72bd99fde7cd20a6aef5af07fec9cf71 655 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 2.6E-93 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 YE1268 72bd99fde7cd20a6aef5af07fec9cf71 655 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 2.6E-93 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 YE1268 72bd99fde7cd20a6aef5af07fec9cf71 655 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 2.6E-93 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 YE1268 72bd99fde7cd20a6aef5af07fec9cf71 655 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 2.6E-93 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 YE1268 72bd99fde7cd20a6aef5af07fec9cf71 655 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 2.6E-93 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 YE1268 72bd99fde7cd20a6aef5af07fec9cf71 655 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 2.6E-93 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 YE1268 72bd99fde7cd20a6aef5af07fec9cf71 655 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 2.6E-93 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 YE1268 72bd99fde7cd20a6aef5af07fec9cf71 655 PANTHER PTHR30009:SF0 1 418 0.0 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 YE1268 72bd99fde7cd20a6aef5af07fec9cf71 655 PANTHER PTHR30009:SF0 473 655 0.0 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 YE1268 72bd99fde7cd20a6aef5af07fec9cf71 655 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 641 6.9E-284 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 YE2349A 280762aafd3792ce42262aa8898845c6 74 Gene3D G3DSA:1.10.260.40 4 63 4.3E-21 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE2349A 280762aafd3792ce42262aa8898845c6 74 SUPERFAMILY SSF47413 6 64 3.11E-13 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE2349A 280762aafd3792ce42262aa8898845c6 74 Pfam PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT 6 65 1.9E-22 T 22-04-2016 IPR031856 Putative bacterial antitoxin YdaS YE3382 25fd431d58a226da95935f76b04eda52 473 Pfam PF06123 Inner membrane protein CreD 6 428 1.1E-150 T 22-04-2016 IPR010364 Uncharacterised protein family, inner membrane CreD YE3382 25fd431d58a226da95935f76b04eda52 473 PANTHER PTHR30092 1 442 2.6E-185 T 22-04-2016 YE3382 25fd431d58a226da95935f76b04eda52 473 PIRSF PIRSF004548 1 454 4.1E-184 T 22-04-2016 IPR010364 Uncharacterised protein family, inner membrane CreD YE1843 6614c62e61567fc19e9f5bd2a6670532 290 SUPERFAMILY SSF55174 7 62 2.69E-13 T 22-04-2016 YE1843 6614c62e61567fc19e9f5bd2a6670532 290 Pfam PF01479 S4 domain 8 52 4.9E-11 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YE1843 6614c62e61567fc19e9f5bd2a6670532 290 SUPERFAMILY SSF55120 69 229 7.67E-37 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 YE1843 6614c62e61567fc19e9f5bd2a6670532 290 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 73 225 5.4E-51 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 YE1843 6614c62e61567fc19e9f5bd2a6670532 290 PANTHER PTHR21600:SF24 1 252 1.4E-138 T 22-04-2016 YE1843 6614c62e61567fc19e9f5bd2a6670532 290 Pfam PF00849 RNA pseudouridylate synthase 69 194 5.2E-13 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 YE1843 6614c62e61567fc19e9f5bd2a6670532 290 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 104 118 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 YE1843 6614c62e61567fc19e9f5bd2a6670532 290 Gene3D G3DSA:3.10.290.10 5 60 8.6E-20 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YE1843 6614c62e61567fc19e9f5bd2a6670532 290 PANTHER PTHR21600 1 252 1.4E-138 T 22-04-2016 YE1843 6614c62e61567fc19e9f5bd2a6670532 290 SMART SM00363 7 63 4.7E-10 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YE0387 3ab97858cf5bcbd8d5ad6f653ac6aa82 102 SUPERFAMILY SSF159871 4 102 2.62E-22 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 YE0387 3ab97858cf5bcbd8d5ad6f653ac6aa82 102 Pfam PF07338 Protein of unknown function (DUF1471) 47 102 6.5E-19 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 YE0387 3ab97858cf5bcbd8d5ad6f653ac6aa82 102 Gene3D G3DSA:3.30.1660.10 37 102 9.6E-22 T 22-04-2016 IPR025543 Dodecin-like YE2326 9221b89a8326dea35c3fb4131d5dd657 190 Pfam PF03592 Terminase small subunit 3 155 3.7E-36 T 22-04-2016 IPR005335 Terminase small subunit GO:0006323 YE2326 9221b89a8326dea35c3fb4131d5dd657 190 PANTHER PTHR41328 1 164 2.4E-15 T 22-04-2016 YE3116 8e0a0fcfba07c24469a11a9a22bebd57 129 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 31 108 5.1E-16 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 YE3116 8e0a0fcfba07c24469a11a9a22bebd57 129 SUPERFAMILY SSF46767 30 112 1.1E-25 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 YE3116 8e0a0fcfba07c24469a11a9a22bebd57 129 PANTHER PTHR10815:SF2 20 127 2.7E-53 T 22-04-2016 YE3116 8e0a0fcfba07c24469a11a9a22bebd57 129 PANTHER PTHR10815 20 127 2.7E-53 T 22-04-2016 YE3116 8e0a0fcfba07c24469a11a9a22bebd57 129 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 32 110 5.3E-25 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 YE3116 8e0a0fcfba07c24469a11a9a22bebd57 129 Gene3D G3DSA:1.10.10.10 29 113 2.0E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0005 c42fec357aebbb54a7fbd94eedef6f2c 488 SMART SM00327 324 488 6.9E-7 T 22-04-2016 IPR002035 von Willebrand factor, type A YE0005 c42fec357aebbb54a7fbd94eedef6f2c 488 Pfam PF05762 VWA domain containing CoxE-like protein 309 441 4.2E-9 T 22-04-2016 IPR008912 Uncharacterised protein family CoxE-like YE0005 c42fec357aebbb54a7fbd94eedef6f2c 488 Hamap MF_01626 Protein ViaA [viaA]. 1 488 58.941 T 22-04-2016 IPR023481 Uncharacterised protein family ViaA YE0005 c42fec357aebbb54a7fbd94eedef6f2c 488 SUPERFAMILY SSF53300 323 464 1.72E-18 T 22-04-2016 IPR002035 von Willebrand factor, type A YE0005 c42fec357aebbb54a7fbd94eedef6f2c 488 PANTHER PTHR36846 1 488 1.2E-136 T 22-04-2016 YE0184 16e6ab741659a68e3d763870f1fa09dd 399 Pfam PF07219 HemY protein N-terminus 26 132 9.0E-35 T 22-04-2016 IPR010817 HemY, N-terminal UniPathway: UPA00252 YE0184 16e6ab741659a68e3d763870f1fa09dd 399 Gene3D G3DSA:1.25.40.10 83 203 2.4E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YE0184 16e6ab741659a68e3d763870f1fa09dd 399 Gene3D G3DSA:1.25.40.10 265 386 2.4E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YE0184 16e6ab741659a68e3d763870f1fa09dd 399 SUPERFAMILY SSF48452 269 388 4.01E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YE0184 16e6ab741659a68e3d763870f1fa09dd 399 SUPERFAMILY SSF48452 149 226 4.01E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YE0184 16e6ab741659a68e3d763870f1fa09dd 399 PANTHER PTHR23083 83 382 5.6E-28 T 22-04-2016 YE0184 16e6ab741659a68e3d763870f1fa09dd 399 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 3 386 3.1E-136 T 22-04-2016 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 UniPathway: UPA00252 YE0184 16e6ab741659a68e3d763870f1fa09dd 399 PANTHER PTHR23083:SF396 83 382 5.6E-28 T 22-04-2016 YE2391 edbf7de3f854ed01fa7dc944cee3854c 493 Pfam PF00854 POT family 82 442 4.4E-88 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 YE2391 edbf7de3f854ed01fa7dc944cee3854c 493 Hamap MF_01879 Dipeptide and tripeptide permease B [dtpB]. 3 486 45.993 T 22-04-2016 IPR023778 Amino acid/peptide transporter family, dipeptide/tripeptide permease B YE2391 edbf7de3f854ed01fa7dc944cee3854c 493 PANTHER PTHR11654 252 493 8.1E-235 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 YE2391 edbf7de3f854ed01fa7dc944cee3854c 493 PANTHER PTHR11654 9 229 8.1E-235 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 YE2391 edbf7de3f854ed01fa7dc944cee3854c 493 Gene3D G3DSA:1.20.1250.20 279 477 1.8E-6 T 22-04-2016 YE2391 edbf7de3f854ed01fa7dc944cee3854c 493 SUPERFAMILY SSF103473 245 480 3.92E-25 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE2391 edbf7de3f854ed01fa7dc944cee3854c 493 SUPERFAMILY SSF103473 12 208 3.92E-25 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE2391 edbf7de3f854ed01fa7dc944cee3854c 493 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 145 157 - T 22-04-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 YE2391 edbf7de3f854ed01fa7dc944cee3854c 493 PANTHER PTHR11654:SF102 252 493 8.1E-235 T 22-04-2016 YE2391 edbf7de3f854ed01fa7dc944cee3854c 493 PANTHER PTHR11654:SF102 9 229 8.1E-235 T 22-04-2016 YE2391 edbf7de3f854ed01fa7dc944cee3854c 493 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 9 483 7.2E-184 T 22-04-2016 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 YE2391 edbf7de3f854ed01fa7dc944cee3854c 493 Gene3D G3DSA:1.20.1250.20 14 195 3.8E-18 T 22-04-2016 YE1916 ef38ec8ad881d8ce2fdfde588c00fe9c 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 327 3.4E-117 T 22-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 YE1916 ef38ec8ad881d8ce2fdfde588c00fe9c 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 5.8E-25 T 22-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 YE1916 ef38ec8ad881d8ce2fdfde588c00fe9c 327 SUPERFAMILY SSF46589 14 99 8.37E-22 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 YE1916 ef38ec8ad881d8ce2fdfde588c00fe9c 327 Gene3D G3DSA:3.30.930.10 9 327 2.7E-133 T 22-04-2016 YE1916 ef38ec8ad881d8ce2fdfde588c00fe9c 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 49.77 T 22-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 YE1916 ef38ec8ad881d8ce2fdfde588c00fe9c 327 PANTHER PTHR11538 92 327 3.5E-120 T 22-04-2016 YE1916 ef38ec8ad881d8ce2fdfde588c00fe9c 327 Pfam PF01409 tRNA synthetases class II core domain (F) 92 326 6.6E-107 T 22-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 YE1916 ef38ec8ad881d8ce2fdfde588c00fe9c 327 SUPERFAMILY SSF55681 92 327 6.56E-82 T 22-04-2016 YE1860 2b8547ec9b02f20740035ecf8c3b578b 185 PANTHER PTHR37089:SF4 10 185 1.2E-66 T 22-04-2016 YE1860 2b8547ec9b02f20740035ecf8c3b578b 185 SMART SM00972 127 182 4.5E-21 T 22-04-2016 IPR007893 Spore coat protein U YE1860 2b8547ec9b02f20740035ecf8c3b578b 185 Pfam PF05229 Spore Coat Protein U domain 40 182 1.1E-33 T 22-04-2016 IPR007893 Spore coat protein U YE1860 2b8547ec9b02f20740035ecf8c3b578b 185 PANTHER PTHR37089 10 185 1.2E-66 T 22-04-2016 YE3478 8f2a6cd93ae591147c839039b3244ddb 97 SUPERFAMILY SSF46785 2 93 9.63E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3478 8f2a6cd93ae591147c839039b3244ddb 97 PANTHER PTHR33154:SF5 1 92 6.2E-39 T 22-04-2016 YE3478 8f2a6cd93ae591147c839039b3244ddb 97 Gene3D G3DSA:1.10.10.10 1 94 1.0E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3478 8f2a6cd93ae591147c839039b3244ddb 97 PANTHER PTHR33154 1 92 6.2E-39 T 22-04-2016 YE3478 8f2a6cd93ae591147c839039b3244ddb 97 Pfam PF12840 Helix-turn-helix domain 7 69 3.9E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3478 8f2a6cd93ae591147c839039b3244ddb 97 SMART SM00418 8 88 1.2E-10 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YE0200 16495d976ee28072b725f1d3d372d3de 316 Gene3D G3DSA:1.20.58.340 240 316 1.9E-28 T 22-04-2016 YE0200 16495d976ee28072b725f1d3d372d3de 316 SUPERFAMILY SSF143865 1 255 3.92E-37 T 22-04-2016 YE0200 16495d976ee28072b725f1d3d372d3de 316 Pfam PF01544 CorA-like Mg2+ transporter protein 26 312 3.3E-54 T 22-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 YE0200 16495d976ee28072b725f1d3d372d3de 316 PANTHER PTHR21535:SF37 7 316 4.1E-165 T 22-04-2016 YE0200 16495d976ee28072b725f1d3d372d3de 316 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 3 316 2.1E-107 T 22-04-2016 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 YE0200 16495d976ee28072b725f1d3d372d3de 316 SUPERFAMILY SSF144083 251 314 9.29E-21 T 22-04-2016 YE0200 16495d976ee28072b725f1d3d372d3de 316 PANTHER PTHR21535 7 316 4.1E-165 T 22-04-2016 YE2081 2cf767d5e2b121b4369817a0005039d8 463 PANTHER PTHR11785:SF77 1 462 2.9E-230 T 22-04-2016 YE2081 2cf767d5e2b121b4369817a0005039d8 463 PIRSF PIRSF006060 1 462 1.2E-49 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YE2081 2cf767d5e2b121b4369817a0005039d8 463 Pfam PF13520 Amino acid permease 5 416 2.6E-74 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YE2081 2cf767d5e2b121b4369817a0005039d8 463 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 3 462 5.8E-169 T 22-04-2016 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 YE2081 2cf767d5e2b121b4369817a0005039d8 463 PANTHER PTHR11785 1 462 2.9E-230 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YE2695 12c5ea59c8e6077ac3a081489d98ab08 186 PANTHER PTHR33420 1 186 1.0E-54 T 22-04-2016 YE2695 12c5ea59c8e6077ac3a081489d98ab08 186 SUPERFAMILY SSF49401 30 186 3.38E-23 T 22-04-2016 IPR008966 Adhesion domain YE2695 12c5ea59c8e6077ac3a081489d98ab08 186 PANTHER PTHR33420:SF2 1 186 1.0E-54 T 22-04-2016 YE2695 12c5ea59c8e6077ac3a081489d98ab08 186 Pfam PF16970 Type-1 fimbrial protein, A 55 185 4.2E-14 T 22-04-2016 YE2695 12c5ea59c8e6077ac3a081489d98ab08 186 Gene3D G3DSA:2.60.40.1090 29 186 2.0E-25 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YE1240 7c85c3eedb4c82a5a2fa18faf8dd276a 528 PANTHER PTHR30193 19 270 5.9E-86 T 22-04-2016 YE1240 7c85c3eedb4c82a5a2fa18faf8dd276a 528 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 345 524 7.3E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE1240 7c85c3eedb4c82a5a2fa18faf8dd276a 528 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 253 3.5E-6 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE1240 7c85c3eedb4c82a5a2fa18faf8dd276a 528 SUPERFAMILY SSF161098 283 519 1.87E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE1240 7c85c3eedb4c82a5a2fa18faf8dd276a 528 Gene3D G3DSA:1.10.3720.10 30 254 1.1E-31 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE1240 7c85c3eedb4c82a5a2fa18faf8dd276a 528 Gene3D G3DSA:1.10.3720.10 317 524 8.5E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE1240 7c85c3eedb4c82a5a2fa18faf8dd276a 528 PANTHER PTHR30193:SF3 19 270 5.9E-86 T 22-04-2016 YE1240 7c85c3eedb4c82a5a2fa18faf8dd276a 528 SUPERFAMILY SSF161098 28 254 3.6E-36 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE1434 3726d27d45d459a66cee5bc3bc0fa049 233 Gene3D G3DSA:1.20.144.10 23 201 1.7E-14 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YE1434 3726d27d45d459a66cee5bc3bc0fa049 233 SUPERFAMILY SSF48317 13 219 3.14E-22 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YE1434 3726d27d45d459a66cee5bc3bc0fa049 233 Pfam PF01569 PAP2 superfamily 126 200 4.9E-8 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YE1434 3726d27d45d459a66cee5bc3bc0fa049 233 Hamap MF_01945 Lipid A 1-diphosphate synthase [lpxT]. 2 233 42.135 T 22-04-2016 IPR032908 Lipid A 1-diphosphate synthase GO:0005886|GO:0043165|GO:0050380 UniPathway: UPA00030 YE1434 3726d27d45d459a66cee5bc3bc0fa049 233 SMART SM00014 95 210 1.1E-11 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YE1418 f7812edb7de0be6371be0a4dc16fad82 343 PANTHER PTHR11746 1 342 7.6E-79 T 22-04-2016 YE1418 f7812edb7de0be6371be0a4dc16fad82 343 PIRSF PIRSF005739 1 343 2.6E-47 T 22-04-2016 IPR016461 O-methyltransferase COMT-type GO:0008168 YE1418 f7812edb7de0be6371be0a4dc16fad82 343 Gene3D G3DSA:1.10.10.10 13 102 2.4E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1418 f7812edb7de0be6371be0a4dc16fad82 343 Pfam PF00891 O-methyltransferase 111 321 8.3E-38 T 22-04-2016 IPR001077 O-methyltransferase, family 2 GO:0008171 YE1418 f7812edb7de0be6371be0a4dc16fad82 343 Gene3D G3DSA:3.40.50.150 103 341 2.6E-61 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE1418 f7812edb7de0be6371be0a4dc16fad82 343 SUPERFAMILY SSF53335 99 340 6.29E-41 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE1418 f7812edb7de0be6371be0a4dc16fad82 343 PANTHER PTHR11746:SF63 1 342 7.6E-79 T 22-04-2016 YE1418 f7812edb7de0be6371be0a4dc16fad82 343 SUPERFAMILY SSF46785 9 99 3.42E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2876 144bf9076b18b367f4fb63cf64b3d8c6 267 Gene3D G3DSA:1.10.3720.10 69 262 4.3E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE2876 144bf9076b18b367f4fb63cf64b3d8c6 267 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 250 8.3E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE2876 144bf9076b18b367f4fb63cf64b3d8c6 267 PANTHER PTHR30043:SF1 60 267 5.7E-101 T 22-04-2016 YE2876 144bf9076b18b367f4fb63cf64b3d8c6 267 PANTHER PTHR30043:SF1 1 42 5.7E-101 T 22-04-2016 YE2876 144bf9076b18b367f4fb63cf64b3d8c6 267 SUPERFAMILY SSF161098 68 254 1.44E-32 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE2876 144bf9076b18b367f4fb63cf64b3d8c6 267 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 5 262 4.1E-83 T 22-04-2016 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 YE2876 144bf9076b18b367f4fb63cf64b3d8c6 267 PANTHER PTHR30043 60 267 5.7E-101 T 22-04-2016 YE2876 144bf9076b18b367f4fb63cf64b3d8c6 267 PANTHER PTHR30043 1 42 5.7E-101 T 22-04-2016 YE2035 0c411918080e920722d018018dd2e343 415 Gene3D G3DSA:1.20.1250.20 22 200 5.3E-18 T 22-04-2016 YE2035 0c411918080e920722d018018dd2e343 415 Gene3D G3DSA:1.20.1250.20 225 399 2.4E-8 T 22-04-2016 YE2035 0c411918080e920722d018018dd2e343 415 PANTHER PTHR23513 19 404 4.2E-52 T 22-04-2016 YE2035 0c411918080e920722d018018dd2e343 415 SUPERFAMILY SSF103473 20 399 1.57E-40 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE2035 0c411918080e920722d018018dd2e343 415 Pfam PF07690 Major Facilitator Superfamily 23 361 7.9E-30 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YE1609a bd04faf06064a7c6e0a66f6f11cf1919 144 SUPERFAMILY SSF54593 19 138 5.36E-11 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase YE3026 28fdd5dbfba5908043133b5dd85ebc32 118 Gene3D G3DSA:2.60.120.10 38 113 3.1E-13 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YE3026 28fdd5dbfba5908043133b5dd85ebc32 118 PANTHER PTHR33570:SF5 23 108 1.8E-21 T 22-04-2016 YE3026 28fdd5dbfba5908043133b5dd85ebc32 118 PANTHER PTHR33570 23 108 1.8E-21 T 22-04-2016 YE3026 28fdd5dbfba5908043133b5dd85ebc32 118 SUPERFAMILY SSF51182 43 113 1.02E-14 T 22-04-2016 IPR011051 RmlC-like cupin domain YE1138 bcb11fbc17ffa07cf1d6fe66783e6358 352 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 9 344 38.953 T 22-04-2016 IPR014524 Outer membrane protein assembly factor BamC YE1138 bcb11fbc17ffa07cf1d6fe66783e6358 352 PIRSF PIRSF026343 9 346 7.8E-111 T 22-04-2016 IPR014524 Outer membrane protein assembly factor BamC YE1138 bcb11fbc17ffa07cf1d6fe66783e6358 352 Pfam PF06804 NlpB/DapX lipoprotein 40 343 4.8E-111 T 22-04-2016 IPR010653 NlpB/DapX lipoprotein YE2484 d8a6a198962d29c646079fad3894d380 822 SUPERFAMILY SSF48452 105 215 6.25E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YE2484 d8a6a198962d29c646079fad3894d380 822 Gene3D G3DSA:1.25.40.10 105 213 4.1E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YE2484 d8a6a198962d29c646079fad3894d380 822 TIGRFAM TIGR03939 PGA_TPR_OMP: poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA 17 822 0.0 T 22-04-2016 IPR023870 Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA GO:0022891|GO:0042710 YE4041 5862d9c645cc95ba0febed8e80f3b066 463 PIRSF PIRSF004729 1 463 3.8E-171 T 22-04-2016 IPR006230 Protein MutL YE4041 5862d9c645cc95ba0febed8e80f3b066 463 TIGRFAM TIGR01319 glmL_fam: conserved hypothetical protein 6 461 1.8E-197 T 22-04-2016 IPR006230 Protein MutL YE4041 5862d9c645cc95ba0febed8e80f3b066 463 Pfam PF13941 MutL protein 4 456 1.3E-124 T 22-04-2016 IPR006230 Protein MutL YE0258 22d9d6cda4f9c5951607a50958711323 543 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 539 57.444 T 22-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 YE0258 22d9d6cda4f9c5951607a50958711323 543 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 6 445 1.2E-178 T 22-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 YE0258 22d9d6cda4f9c5951607a50958711323 543 Gene3D G3DSA:3.90.1200.10 251 296 8.7E-4 T 22-04-2016 YE0258 22d9d6cda4f9c5951607a50958711323 543 Pfam PF03109 ABC1 family 113 231 1.0E-34 T 22-04-2016 IPR004147 UbiB domain YE0258 22d9d6cda4f9c5951607a50958711323 543 PANTHER PTHR10566:SF79 1 541 0.0 T 22-04-2016 YE0258 22d9d6cda4f9c5951607a50958711323 543 PANTHER PTHR10566 1 541 0.0 T 22-04-2016 YE0258 22d9d6cda4f9c5951607a50958711323 543 Gene3D G3DSA:3.30.200.20 127 156 4.0E-4 T 22-04-2016 YE0258 22d9d6cda4f9c5951607a50958711323 543 Gene3D G3DSA:3.30.200.20 192 227 4.0E-4 T 22-04-2016 YE0258 22d9d6cda4f9c5951607a50958711323 543 SUPERFAMILY SSF56112 94 158 1.99E-46 T 22-04-2016 IPR011009 Protein kinase-like domain YE0258 22d9d6cda4f9c5951607a50958711323 543 SUPERFAMILY SSF56112 193 435 1.99E-46 T 22-04-2016 IPR011009 Protein kinase-like domain YE3514 8e2dc431679f49659631bfbebfe0c76e 455 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 14 446 3.9E-144 T 22-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 YE3514 8e2dc431679f49659631bfbebfe0c76e 455 SUPERFAMILY SSF52540 283 437 4.26E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3514 8e2dc431679f49659631bfbebfe0c76e 455 SUPERFAMILY SSF52540 184 256 4.26E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3514 8e2dc431679f49659631bfbebfe0c76e 455 Gene3D G3DSA:1.10.860.10 14 111 1.1E-33 T 22-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal YE3514 8e2dc431679f49659631bfbebfe0c76e 455 SUPERFAMILY SSF48024 13 119 4.58E-33 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 YE3514 8e2dc431679f49659631bfbebfe0c76e 455 Pfam PF03796 DnaB-like helicase C terminal domain 186 444 1.5E-96 T 22-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 YE3514 8e2dc431679f49659631bfbebfe0c76e 455 PANTHER PTHR30153 14 454 4.9E-170 T 22-04-2016 YE3514 8e2dc431679f49659631bfbebfe0c76e 455 Pfam PF00772 DnaB-like helicase N terminal domain 14 111 2.2E-30 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 YE3514 8e2dc431679f49659631bfbebfe0c76e 455 Gene3D G3DSA:3.40.50.300 174 446 1.3E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3936 2d73be517a0563682f56c87e0c80db2a 71 Pfam PF04102 SlyX 7 71 2.6E-23 T 22-04-2016 IPR007236 SlyX YE3936 2d73be517a0563682f56c87e0c80db2a 71 Hamap MF_00715 Protein SlyX [slyX]. 5 71 15.922 T 22-04-2016 IPR007236 SlyX YE3936 2d73be517a0563682f56c87e0c80db2a 71 Gene3D G3DSA:1.20.5.300 3 52 1.9E-19 T 22-04-2016 YE3936 2d73be517a0563682f56c87e0c80db2a 71 PANTHER PTHR36508 1 71 2.3E-24 T 22-04-2016 YE1710 ffe3772ba1ecfdd80e857ad3930103a7 400 PANTHER PTHR30489 1 400 1.8E-235 T 22-04-2016 YE1710 ffe3772ba1ecfdd80e857ad3930103a7 400 Pfam PF12704 MacB-like periplasmic core domain 27 209 1.0E-11 T 22-04-2016 IPR025857 MacB-like periplasmic core domain YE1710 ffe3772ba1ecfdd80e857ad3930103a7 400 PANTHER PTHR30489:SF8 1 400 1.8E-235 T 22-04-2016 YE1710 ffe3772ba1ecfdd80e857ad3930103a7 400 Pfam PF02687 FtsX-like permease family 271 392 5.1E-17 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 YE1710 ffe3772ba1ecfdd80e857ad3930103a7 400 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 400 3.9E-139 T 22-04-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 YE1635 3890ff8c84df4c0184e41c1cabfd2948 244 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 242 2.8E-100 T 22-04-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 YE1635 3890ff8c84df4c0184e41c1cabfd2948 244 PANTHER PTHR24322 151 183 1.7E-77 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE1635 3890ff8c84df4c0184e41c1cabfd2948 244 PANTHER PTHR24322 10 135 1.7E-77 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE1635 3890ff8c84df4c0184e41c1cabfd2948 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 1.3E-49 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE1635 3890ff8c84df4c0184e41c1cabfd2948 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 1.3E-49 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE1635 3890ff8c84df4c0184e41c1cabfd2948 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 1.3E-49 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE1635 3890ff8c84df4c0184e41c1cabfd2948 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 1.3E-49 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE1635 3890ff8c84df4c0184e41c1cabfd2948 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 1.3E-49 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE1635 3890ff8c84df4c0184e41c1cabfd2948 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.3E-49 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE1635 3890ff8c84df4c0184e41c1cabfd2948 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 YE1635 3890ff8c84df4c0184e41c1cabfd2948 244 SUPERFAMILY SSF51735 4 243 1.67E-86 T 22-04-2016 IPR016040 NAD(P)-binding domain YE1635 3890ff8c84df4c0184e41c1cabfd2948 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 187 1.7E-5 T 22-04-2016 YE1635 3890ff8c84df4c0184e41c1cabfd2948 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 3.2E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE1635 3890ff8c84df4c0184e41c1cabfd2948 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 3.2E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE1635 3890ff8c84df4c0184e41c1cabfd2948 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 3.2E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE1635 3890ff8c84df4c0184e41c1cabfd2948 244 Gene3D G3DSA:3.40.50.720 1 243 2.3E-88 T 22-04-2016 IPR016040 NAD(P)-binding domain YE1635 3890ff8c84df4c0184e41c1cabfd2948 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 9.2E-67 T 22-04-2016 YE1635 3890ff8c84df4c0184e41c1cabfd2948 244 PANTHER PTHR24322:SF635 151 183 1.7E-77 T 22-04-2016 YE1635 3890ff8c84df4c0184e41c1cabfd2948 244 PANTHER PTHR24322:SF635 10 135 1.7E-77 T 22-04-2016 YE4167 91dbcc688657b64658bd62dc4faef9f7 319 SUPERFAMILY SSF53686 6 308 1.83E-91 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YE4167 91dbcc688657b64658bd62dc4faef9f7 319 PANTHER PTHR10314:SF30 6 308 1.7E-113 T 22-04-2016 YE4167 91dbcc688657b64658bd62dc4faef9f7 319 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 43 56 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 YE4167 91dbcc688657b64658bd62dc4faef9f7 319 Gene3D G3DSA:3.40.50.1100 70 313 1.5E-68 T 22-04-2016 YE4167 91dbcc688657b64658bd62dc4faef9f7 319 PANTHER PTHR10314 6 308 1.7E-113 T 22-04-2016 YE4167 91dbcc688657b64658bd62dc4faef9f7 319 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 17 305 8.9E-82 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YE2547 c03178d4ed5fb3e604a449f53baa6f29 228 PANTHER PTHR30587:SF0 10 228 1.1E-122 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 YE2547 c03178d4ed5fb3e604a449f53baa6f29 228 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 203 215 - T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YE2547 c03178d4ed5fb3e604a449f53baa6f29 228 Pfam PF00813 FliP family 31 222 1.3E-77 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YE2547 c03178d4ed5fb3e604a449f53baa6f29 228 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 30 226 4.9E-93 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 YE2547 c03178d4ed5fb3e604a449f53baa6f29 228 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 28 47 8.6E-68 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YE2547 c03178d4ed5fb3e604a449f53baa6f29 228 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 47 67 8.6E-68 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YE2547 c03178d4ed5fb3e604a449f53baa6f29 228 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 67 86 8.6E-68 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YE2547 c03178d4ed5fb3e604a449f53baa6f29 228 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 155 175 8.6E-68 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YE2547 c03178d4ed5fb3e604a449f53baa6f29 228 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 176 197 8.6E-68 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YE2547 c03178d4ed5fb3e604a449f53baa6f29 228 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 200 225 8.6E-68 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YE2547 c03178d4ed5fb3e604a449f53baa6f29 228 PANTHER PTHR30587 10 228 1.1E-122 T 22-04-2016 YE2547 c03178d4ed5fb3e604a449f53baa6f29 228 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 155 170 - T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 YE2547 c03178d4ed5fb3e604a449f53baa6f29 228 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 26 35 8.6E-32 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 YE2547 c03178d4ed5fb3e604a449f53baa6f29 228 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 126 138 8.6E-32 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 YE2547 c03178d4ed5fb3e604a449f53baa6f29 228 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 148 160 8.6E-32 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 YE2547 c03178d4ed5fb3e604a449f53baa6f29 228 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 98 112 8.6E-32 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 YE2547 c03178d4ed5fb3e604a449f53baa6f29 228 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 86 98 8.6E-32 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 YE2547 c03178d4ed5fb3e604a449f53baa6f29 228 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 216 226 8.6E-32 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 YE0024 ad40b575c105cea6856d589f4a6a5de7 457 Pfam PF04055 Radical SAM superfamily 57 226 2.1E-16 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 YE0024 ad40b575c105cea6856d589f4a6a5de7 457 SUPERFAMILY SSF102114 6 444 3.92E-146 T 22-04-2016 YE0024 ad40b575c105cea6856d589f4a6a5de7 457 Pfam PF06969 HemN C-terminal domain 364 431 5.1E-10 T 22-04-2016 IPR010723 HemN, C-terminal YE0024 ad40b575c105cea6856d589f4a6a5de7 457 PANTHER PTHR13932:SF6 1 451 2.3E-267 T 22-04-2016 YE0024 ad40b575c105cea6856d589f4a6a5de7 457 PANTHER PTHR13932 1 451 2.3E-267 T 22-04-2016 YE0024 ad40b575c105cea6856d589f4a6a5de7 457 PIRSF PIRSF000167 4 454 4.8E-174 T 22-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 YE0024 ad40b575c105cea6856d589f4a6a5de7 457 Gene3D G3DSA:3.80.30.20 53 274 3.8E-31 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe YE0024 ad40b575c105cea6856d589f4a6a5de7 457 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 8 457 3.5E-220 T 22-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 YE0024 ad40b575c105cea6856d589f4a6a5de7 457 SMART SM00729 52 272 1.3E-55 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 YE1554 12157f5665262ac8dcbf8bae866e67ae 440 Pfam PF17193 MukF C-terminal domain 283 440 1.4E-78 T 22-04-2016 IPR033441 Chromosome partition protein MukF, C-terminal domain YE1554 12157f5665262ac8dcbf8bae866e67ae 440 Pfam PF17192 MukF middle domain 121 281 5.0E-85 T 22-04-2016 IPR033440 Chromosome partition protein MukF, middle domain YE1554 12157f5665262ac8dcbf8bae866e67ae 440 Pfam PF03882 MukF winged-helix domain 3 117 7.5E-59 T 22-04-2016 IPR033439 Chromosome partition protein MukF, winged-helix domain YE1554 12157f5665262ac8dcbf8bae866e67ae 440 Gene3D G3DSA:1.10.10.10 24 118 5.5E-50 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1554 12157f5665262ac8dcbf8bae866e67ae 440 Hamap MF_01803 Chromosome partition protein MukF [mukF]. 1 440 55.408 T 22-04-2016 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 YE1554 12157f5665262ac8dcbf8bae866e67ae 440 PIRSF PIRSF018282 1 440 7.4E-248 T 22-04-2016 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 YE1554 12157f5665262ac8dcbf8bae866e67ae 440 SUPERFAMILY SSF46785 8 118 1.9E-50 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1554 12157f5665262ac8dcbf8bae866e67ae 440 SUPERFAMILY SSF140570 119 281 1.96E-76 T 22-04-2016 IPR033440 Chromosome partition protein MukF, middle domain YE3834 0534bf93c6221166158255caa9d6da43 392 Gene3D G3DSA:1.10.3720.10 255 387 4.4E-46 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE3834 0534bf93c6221166158255caa9d6da43 392 Gene3D G3DSA:1.10.3720.10 81 150 4.4E-46 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE3834 0534bf93c6221166158255caa9d6da43 392 PANTHER PTHR30085 13 171 3.6E-160 T 22-04-2016 YE3834 0534bf93c6221166158255caa9d6da43 392 PANTHER PTHR30085 250 392 3.6E-160 T 22-04-2016 YE3834 0534bf93c6221166158255caa9d6da43 392 SUPERFAMILY SSF161098 82 213 1.44E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE3834 0534bf93c6221166158255caa9d6da43 392 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 262 388 5.4E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE3834 0534bf93c6221166158255caa9d6da43 392 PANTHER PTHR30085:SF1 13 171 3.6E-160 T 22-04-2016 YE3834 0534bf93c6221166158255caa9d6da43 392 PANTHER PTHR30085:SF1 250 392 3.6E-160 T 22-04-2016 YE3834 0534bf93c6221166158255caa9d6da43 392 SUPERFAMILY SSF161098 180 374 1.23E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE3834 0534bf93c6221166158255caa9d6da43 392 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 83 146 3.6E-17 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 YE1158 22a5c6cf39b016b45a5cfff9de9f992c 199 PIRSF PIRSF000013 1 199 1.4E-107 T 22-04-2016 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 YE1158 22a5c6cf39b016b45a5cfff9de9f992c 199 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 21 192 1.6E-77 T 22-04-2016 IPR005126 NapC/NirT cytochrome c, N-terminal YE1158 22a5c6cf39b016b45a5cfff9de9f992c 199 Gene3D G3DSA:1.10.3820.10 18 192 5.5E-28 T 22-04-2016 YE1158 22a5c6cf39b016b45a5cfff9de9f992c 199 PANTHER PTHR30333:SF1 1 199 2.9E-115 T 22-04-2016 YE1158 22a5c6cf39b016b45a5cfff9de9f992c 199 SUPERFAMILY SSF48695 16 195 6.5E-64 T 22-04-2016 IPR011031 Multihaem cytochrome YE1158 22a5c6cf39b016b45a5cfff9de9f992c 199 PANTHER PTHR30333 1 199 2.9E-115 T 22-04-2016 YE1158 22a5c6cf39b016b45a5cfff9de9f992c 199 TIGRFAM TIGR02161 napC_nirT: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family 9 193 1.1E-104 T 22-04-2016 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT GO:0016021|GO:0019333|GO:0020037 YE3174 a5a6bdb60bb7cc1c3bf70d20f461e84a 200 PANTHER PTHR10681 1 194 6.5E-83 T 22-04-2016 YE3174 a5a6bdb60bb7cc1c3bf70d20f461e84a 200 PIRSF PIRSF000239 1 199 3.7E-58 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 YE3174 a5a6bdb60bb7cc1c3bf70d20f461e84a 200 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 194 2.2E-10 T 22-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 YE3174 a5a6bdb60bb7cc1c3bf70d20f461e84a 200 Pfam PF00578 AhpC/TSA family 5 139 2.1E-35 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 YE3174 a5a6bdb60bb7cc1c3bf70d20f461e84a 200 Gene3D G3DSA:3.40.30.10 4 159 8.7E-57 T 22-04-2016 IPR012336 Thioredoxin-like fold YE3174 a5a6bdb60bb7cc1c3bf70d20f461e84a 200 Gene3D G3DSA:3.30.1020.10 160 193 1.0E-12 T 22-04-2016 YE3174 a5a6bdb60bb7cc1c3bf70d20f461e84a 200 SUPERFAMILY SSF52833 1 194 2.29E-65 T 22-04-2016 IPR012336 Thioredoxin-like fold YE1713 28de2e98a2a6666f9e46e17ac97b40a9 303 PANTHER PTHR18964:SF134 1 301 6.7E-154 T 22-04-2016 YE1713 28de2e98a2a6666f9e46e17ac97b40a9 303 Hamap MF_01271 N-acetyl-D-glucosamine kinase [nagK]. 1 303 66.078 T 22-04-2016 IPR023505 N-acetyl-D-glucosamine kinase GO:0045127 KEGG: 00520+2.7.1.59|MetaCyc: PWY-6517|MetaCyc: PWY-6906|UniPathway: UPA00544 YE1713 28de2e98a2a6666f9e46e17ac97b40a9 303 PANTHER PTHR18964 1 301 6.7E-154 T 22-04-2016 YE1713 28de2e98a2a6666f9e46e17ac97b40a9 303 ProSitePatterns PS01125 ROK family signature. 130 157 - T 22-04-2016 IPR000600 ROK family YE1713 28de2e98a2a6666f9e46e17ac97b40a9 303 Pfam PF00480 ROK family 2 300 8.8E-69 T 22-04-2016 IPR000600 ROK family YE1713 28de2e98a2a6666f9e46e17ac97b40a9 303 SUPERFAMILY SSF53067 1 301 6.74E-57 T 22-04-2016 YE1713 28de2e98a2a6666f9e46e17ac97b40a9 303 Gene3D G3DSA:3.30.420.40 1 131 2.5E-37 T 22-04-2016 YE1713 28de2e98a2a6666f9e46e17ac97b40a9 303 Gene3D G3DSA:3.30.420.40 132 278 6.1E-46 T 22-04-2016 YE3279 542344c20deaf039a81517cd7e71d9dd 252 SUPERFAMILY SSF64005 15 238 2.35E-86 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 YE3279 542344c20deaf039a81517cd7e71d9dd 252 Pfam PF01255 Putative undecaprenyl diphosphate synthase 22 242 1.2E-78 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 YE3279 542344c20deaf039a81517cd7e71d9dd 252 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 188 205 - T 22-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 YE3279 542344c20deaf039a81517cd7e71d9dd 252 Gene3D G3DSA:3.40.1180.10 15 244 2.0E-95 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 YE3279 542344c20deaf039a81517cd7e71d9dd 252 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 15 243 39.652 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 YE3279 542344c20deaf039a81517cd7e71d9dd 252 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 16 242 2.5E-101 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 YE3279 542344c20deaf039a81517cd7e71d9dd 252 PANTHER PTHR10291 16 243 1.0E-117 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 YE0356 62c75994f1140a21ba03ee819cdc0025 345 Gene3D G3DSA:3.20.20.70 105 313 6.7E-18 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YE0356 62c75994f1140a21ba03ee819cdc0025 345 TIGRFAM TIGR00238 TIGR00238: KamA family protein 4 328 1.8E-136 T 22-04-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase YE0356 62c75994f1140a21ba03ee819cdc0025 345 Pfam PF13353 4Fe-4S single cluster domain 111 184 1.2E-6 T 22-04-2016 YE0356 62c75994f1140a21ba03ee819cdc0025 345 PANTHER PTHR30538 8 343 1.8E-146 T 22-04-2016 YE0356 62c75994f1140a21ba03ee819cdc0025 345 SUPERFAMILY SSF102114 102 324 1.16E-28 T 22-04-2016 YE0356 62c75994f1140a21ba03ee819cdc0025 345 PIRSF PIRSF004911 3 345 1.7E-120 T 22-04-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase YE0356 62c75994f1140a21ba03ee819cdc0025 345 PANTHER PTHR30538:SF1 8 343 1.8E-146 T 22-04-2016 YE0356 62c75994f1140a21ba03ee819cdc0025 345 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 15 335 2.5E-159 T 22-04-2016 IPR022462 Lysine-2,3-aminomutase-like YE0356 62c75994f1140a21ba03ee819cdc0025 345 Pfam PF04055 Radical SAM superfamily 118 264 3.1E-9 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 YE2219 14b84f9ca4aade167a874baaf95a3094 584 Pfam PF00916 Sulfate permease family 24 387 7.3E-88 T 22-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 YE2219 14b84f9ca4aade167a874baaf95a3094 584 Gene3D G3DSA:3.30.750.24 446 537 1.4E-10 T 22-04-2016 IPR002645 STAS domain YE2219 14b84f9ca4aade167a874baaf95a3094 584 PANTHER PTHR11814 3 574 1.2E-145 T 22-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 YE2219 14b84f9ca4aade167a874baaf95a3094 584 Pfam PF01740 STAS domain 447 532 6.9E-13 T 22-04-2016 IPR002645 STAS domain YE2219 14b84f9ca4aade167a874baaf95a3094 584 SUPERFAMILY SSF52091 444 537 3.34E-11 T 22-04-2016 IPR002645 STAS domain YE2656 631629b399abaf1b974402ac778ba1a6 209 Pfam PF00072 Response regulator receiver domain 4 115 4.6E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE2656 631629b399abaf1b974402ac778ba1a6 209 SUPERFAMILY SSF46894 130 206 1.73E-21 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YE2656 631629b399abaf1b974402ac778ba1a6 209 PANTHER PTHR26402:SF612 2 202 2.4E-145 T 22-04-2016 YE2656 631629b399abaf1b974402ac778ba1a6 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 145 200 1.4E-19 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE2656 631629b399abaf1b974402ac778ba1a6 209 SUPERFAMILY SSF52172 1 125 1.42E-29 T 22-04-2016 IPR011006 CheY-like superfamily YE2656 631629b399abaf1b974402ac778ba1a6 209 PANTHER PTHR26402 2 202 2.4E-145 T 22-04-2016 YE2656 631629b399abaf1b974402ac778ba1a6 209 Gene3D G3DSA:3.40.50.2300 1 144 5.3E-33 T 22-04-2016 YE2656 631629b399abaf1b974402ac778ba1a6 209 Gene3D G3DSA:1.10.10.10 145 205 2.6E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2656 631629b399abaf1b974402ac778ba1a6 209 SMART SM00448 2 115 3.0E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE2656 631629b399abaf1b974402ac778ba1a6 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 176 1.7E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE2656 631629b399abaf1b974402ac778ba1a6 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 146 160 1.7E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE2656 631629b399abaf1b974402ac778ba1a6 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 188 1.7E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE2656 631629b399abaf1b974402ac778ba1a6 209 SMART SM00421 143 200 1.4E-19 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE2656 631629b399abaf1b974402ac778ba1a6 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 160 187 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE2791 f058c74715f8e6a565868974de247cfe 231 PANTHER PTHR30249:SF5 1 230 3.9E-113 T 22-04-2016 YE2791 f058c74715f8e6a565868974de247cfe 231 PANTHER PTHR30249 1 230 3.9E-113 T 22-04-2016 YE2791 f058c74715f8e6a565868974de247cfe 231 Pfam PF04172 LrgB-like family 12 223 4.4E-78 T 22-04-2016 IPR007300 CidB/LrgB family YE2791 f058c74715f8e6a565868974de247cfe 231 TIGRFAM TIGR00659 TIGR00659: TIGR00659 family protein 4 226 1.4E-99 T 22-04-2016 IPR005261 Conserved hypothetical protein CHP00659 YE3177 75e14dbca28922341275f1b06e725fed 612 Gene3D G3DSA:2.60.40.1180 528 609 2.8E-7 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta YE3177 75e14dbca28922341275f1b06e725fed 612 PANTHER PTHR10357 45 140 6.2E-251 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 YE3177 75e14dbca28922341275f1b06e725fed 612 PANTHER PTHR10357 176 589 6.2E-251 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 YE3177 75e14dbca28922341275f1b06e725fed 612 SUPERFAMILY SSF51011 532 609 2.82E-10 T 22-04-2016 YE3177 75e14dbca28922341275f1b06e725fed 612 Pfam PF02903 Alpha amylase, N-terminal ig-like domain 5 108 3.8E-5 T 22-04-2016 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain GO:0004553|GO:0005975 YE3177 75e14dbca28922341275f1b06e725fed 612 Pfam PF00128 Alpha amylase, catalytic domain 179 495 1.7E-74 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 YE3177 75e14dbca28922341275f1b06e725fed 612 Gene3D G3DSA:3.20.20.80 119 524 6.9E-106 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 YE3177 75e14dbca28922341275f1b06e725fed 612 SMART SM00642 129 523 9.7E-84 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 YE3177 75e14dbca28922341275f1b06e725fed 612 SUPERFAMILY SSF51445 119 532 7.31E-93 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YE3177 75e14dbca28922341275f1b06e725fed 612 PANTHER PTHR10357:SF144 45 140 6.2E-251 T 22-04-2016 YE3177 75e14dbca28922341275f1b06e725fed 612 PANTHER PTHR10357:SF144 176 589 6.2E-251 T 22-04-2016 YE3177 75e14dbca28922341275f1b06e725fed 612 PIRSF PIRSF036918 1 611 1.3E-235 T 22-04-2016 IPR017069 Maltodextrin glucosidase GO:0004558|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.20|KEGG: 00500+3.2.1.20|MetaCyc: PWY-842 YE2205 ad5b9b466825875f714860a8d2e6dfb5 196 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 28 196 7.2E-61 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 YE2205 ad5b9b466825875f714860a8d2e6dfb5 196 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 24 196 8.2E-80 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 YE2205 ad5b9b466825875f714860a8d2e6dfb5 196 PANTHER PTHR30069 3 196 3.2E-70 T 22-04-2016 YE2205 ad5b9b466825875f714860a8d2e6dfb5 196 SUPERFAMILY SSF52540 7 196 1.01E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2205 ad5b9b466825875f714860a8d2e6dfb5 196 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 3 21 1.4E-4 T 22-04-2016 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 YE2205 ad5b9b466825875f714860a8d2e6dfb5 196 Gene3D G3DSA:3.40.50.300 3 196 2.0E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2205 ad5b9b466825875f714860a8d2e6dfb5 196 PIRSF PIRSF015617 1 196 3.1E-69 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 YE3085 de826417e0fb90520e8b0497afaa2d4a 174 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 6 169 2.0E-93 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 YE3085 de826417e0fb90520e8b0497afaa2d4a 174 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 8 171 7.3E-49 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 YE3085 de826417e0fb90520e8b0497afaa2d4a 174 PANTHER PTHR21047 1 173 3.6E-43 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 YE3085 de826417e0fb90520e8b0497afaa2d4a 174 Gene3D G3DSA:2.60.120.10 4 171 3.3E-54 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YE3085 de826417e0fb90520e8b0497afaa2d4a 174 SUPERFAMILY SSF51182 4 173 6.03E-54 T 22-04-2016 IPR011051 RmlC-like cupin domain YE3059 bc8f76ffeeb68b37d90d74f67e1cfbf2 149 Pfam PF01957 NfeD-like C-terminal, partner-binding 13 146 1.3E-23 T 22-04-2016 IPR002810 NfeD-like, C-terminal domain YE3059 bc8f76ffeeb68b37d90d74f67e1cfbf2 149 Gene3D G3DSA:2.40.50.140 91 146 1.1E-10 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE3059 bc8f76ffeeb68b37d90d74f67e1cfbf2 149 PANTHER PTHR33507 1 149 1.0E-57 T 22-04-2016 YE3059 bc8f76ffeeb68b37d90d74f67e1cfbf2 149 PANTHER PTHR33507:SF3 1 149 1.0E-57 T 22-04-2016 YE3059 bc8f76ffeeb68b37d90d74f67e1cfbf2 149 SUPERFAMILY SSF141322 89 147 9.42E-7 T 22-04-2016 YE3386 e7adf76bd5339d24ccba0df9541ae234 88 SUPERFAMILY SSF109910 2 78 6.54E-28 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase YE3386 e7adf76bd5339d24ccba0df9541ae234 88 PANTHER PTHR39585 1 88 5.7E-41 T 22-04-2016 YE3386 e7adf76bd5339d24ccba0df9541ae234 88 PANTHER PTHR39585:SF1 1 88 5.7E-41 T 22-04-2016 YE3386 e7adf76bd5339d24ccba0df9541ae234 88 Pfam PF03937 Flavinator of succinate dehydrogenase 6 76 1.8E-26 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase YE3386 e7adf76bd5339d24ccba0df9541ae234 88 Gene3D G3DSA:1.10.150.250 3 85 1.4E-32 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase YE4209 b209d1dfd90614787ca951d80b19b685 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 22-04-2016 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 YE4209 b209d1dfd90614787ca951d80b19b685 177 Gene3D G3DSA:1.10.520.20 3 103 8.3E-34 T 22-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain YE4209 b209d1dfd90614787ca951d80b19b685 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 1.1E-27 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 YE4209 b209d1dfd90614787ca951d80b19b685 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 1.1E-27 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 YE4209 b209d1dfd90614787ca951d80b19b685 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 1.1E-27 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 YE4209 b209d1dfd90614787ca951d80b19b685 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 1.1E-27 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 YE4209 b209d1dfd90614787ca951d80b19b685 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 1.1E-27 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 YE4209 b209d1dfd90614787ca951d80b19b685 177 SUPERFAMILY SSF47928 3 104 3.14E-27 T 22-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain YE4209 b209d1dfd90614787ca951d80b19b685 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 174 8.2E-51 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 YE4209 b209d1dfd90614787ca951d80b19b685 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 3.3E-62 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 YE4209 b209d1dfd90614787ca951d80b19b685 177 PANTHER PTHR11910 8 176 3.7E-59 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 YE4209 b209d1dfd90614787ca951d80b19b685 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 19.098 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 YE2053 8208c278a14a5722ee9b2b3b60290339 331 Gene3D G3DSA:1.10.260.40 9 64 3.0E-21 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE2053 8208c278a14a5722ee9b2b3b60290339 331 SUPERFAMILY SSF47413 8 66 4.88E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE2053 8208c278a14a5722ee9b2b3b60290339 331 Pfam PF13377 Periplasmic binding protein-like domain 174 330 2.5E-27 T 22-04-2016 YE2053 8208c278a14a5722ee9b2b3b60290339 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 12 55 5.9E-14 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE2053 8208c278a14a5722ee9b2b3b60290339 331 Gene3D G3DSA:3.40.50.2300 171 330 1.8E-45 T 22-04-2016 YE2053 8208c278a14a5722ee9b2b3b60290339 331 SMART SM00354 8 78 2.0E-16 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE2053 8208c278a14a5722ee9b2b3b60290339 331 Gene3D G3DSA:3.40.50.2300 65 170 3.1E-21 T 22-04-2016 YE2053 8208c278a14a5722ee9b2b3b60290339 331 SUPERFAMILY SSF53822 66 325 3.62E-54 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YE2053 8208c278a14a5722ee9b2b3b60290339 331 PANTHER PTHR30146 9 330 8.5E-84 T 22-04-2016 YE0625 bf8d2908a0262d53034cf954b4526773 156 Hamap MF_01191 UPF0442 protein YjjB [yjjB]. 1 156 35.159 T 22-04-2016 IPR020914 Uncharacterised protein family UPF0442 YE0625 bf8d2908a0262d53034cf954b4526773 156 PANTHER PTHR34390 1 156 4.4E-52 T 22-04-2016 YE0625 bf8d2908a0262d53034cf954b4526773 156 Pfam PF12821 Threonine/Serine exporter, ThrE 12 146 4.8E-34 T 22-04-2016 IPR024528 Threonine/Serine exporter, ThrE YE0613 905c9dffa6c1b5a45c881e81edf535af 87 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 87 3.0E-36 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0613 905c9dffa6c1b5a45c881e81edf535af 87 SUPERFAMILY SSF46992 3 86 3.53E-32 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0613 905c9dffa6c1b5a45c881e81edf535af 87 PANTHER PTHR33398 2 86 1.8E-40 T 22-04-2016 YE0613 905c9dffa6c1b5a45c881e81edf535af 87 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 7.4E-34 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0613 905c9dffa6c1b5a45c881e81edf535af 87 Pfam PF01649 Ribosomal protein S20 2 84 8.9E-29 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0613 905c9dffa6c1b5a45c881e81edf535af 87 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.616 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0613 905c9dffa6c1b5a45c881e81edf535af 87 Gene3D G3DSA:1.20.58.110 3 87 7.3E-33 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE0804 3d810eb73abf801376e87c7ee0eedb27 271 PANTHER PTHR24220:SF550 9 253 3.8E-114 T 22-04-2016 YE0804 3d810eb73abf801376e87c7ee0eedb27 271 PIRSF PIRSF039085 4 257 1.7E-101 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 YE0804 3d810eb73abf801376e87c7ee0eedb27 271 SUPERFAMILY SSF52540 7 252 2.6E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0804 3d810eb73abf801376e87c7ee0eedb27 271 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE0804 3d810eb73abf801376e87c7ee0eedb27 271 SMART SM00382 32 230 7.9E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain YE0804 3d810eb73abf801376e87c7ee0eedb27 271 Gene3D G3DSA:3.40.50.300 6 252 1.6E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0804 3d810eb73abf801376e87c7ee0eedb27 271 PANTHER PTHR24220 9 253 3.8E-114 T 22-04-2016 YE0804 3d810eb73abf801376e87c7ee0eedb27 271 Pfam PF00005 ABC transporter 24 182 3.4E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE1428 6d25cfcb44683ae8320ac117d6f7ccc7 342 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 13 50 1.3E-8 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YE1428 6d25cfcb44683ae8320ac117d6f7ccc7 342 Gene3D G3DSA:1.10.3720.10 135 338 5.1E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE1428 6d25cfcb44683ae8320ac117d6f7ccc7 342 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 159 339 2.1E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE1428 6d25cfcb44683ae8320ac117d6f7ccc7 342 SUPERFAMILY SSF161098 137 322 5.49E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE1428 6d25cfcb44683ae8320ac117d6f7ccc7 342 PANTHER PTHR30325 2 342 6.4E-206 T 22-04-2016 YE2436 8a1863b0a0d22330f98e5b073a1a9e44 90 Pfam PF10762 Protein of unknown function (DUF2583) 1 87 1.4E-45 T 22-04-2016 IPR019698 Protein of unknown function DUF2583 YE3373 3b94eba04e99dfe44377c2bd0d74752d 538 PANTHER PTHR30349 189 251 2.3E-25 T 22-04-2016 YE3373 3b94eba04e99dfe44377c2bd0d74752d 538 PANTHER PTHR30349 276 537 2.3E-25 T 22-04-2016 YE3373 3b94eba04e99dfe44377c2bd0d74752d 538 Gene3D G3DSA:1.10.443.10 326 516 3.4E-25 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 YE3373 3b94eba04e99dfe44377c2bd0d74752d 538 SUPERFAMILY SSF56349 189 516 8.24E-38 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YE3373 3b94eba04e99dfe44377c2bd0d74752d 538 PANTHER PTHR30349:SF20 189 251 2.3E-25 T 22-04-2016 YE3373 3b94eba04e99dfe44377c2bd0d74752d 538 PANTHER PTHR30349:SF20 276 537 2.3E-25 T 22-04-2016 YE3373 3b94eba04e99dfe44377c2bd0d74752d 538 Pfam PF00589 Phage integrase family 327 516 2.4E-20 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 YE0329 30e69c3bb705add09979ec99329a59b3 279 Gene3D G3DSA:3.40.50.1980 146 275 6.4E-19 T 22-04-2016 YE0329 30e69c3bb705add09979ec99329a59b3 279 Pfam PF01497 Periplasmic binding protein 29 253 9.1E-30 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 YE0329 30e69c3bb705add09979ec99329a59b3 279 PANTHER PTHR30535:SF4 26 275 2.3E-98 T 22-04-2016 YE0329 30e69c3bb705add09979ec99329a59b3 279 SUPERFAMILY SSF53807 26 273 1.41E-49 T 22-04-2016 YE0329 30e69c3bb705add09979ec99329a59b3 279 Gene3D G3DSA:3.40.50.1980 26 145 1.7E-24 T 22-04-2016 YE0329 30e69c3bb705add09979ec99329a59b3 279 PANTHER PTHR30535 26 275 2.3E-98 T 22-04-2016 YE2301 27ecabafaa8ca3748edf1722512cb8a0 132 Pfam PF10810 Protein of unknown function (DUF2545) 15 86 6.2E-6 T 22-04-2016 IPR024470 Protein of unknown function DUF2545 YE2513 d7a9a4e3957c7be08924cf8db959f77d 270 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 232 3.4E-18 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 YE2513 d7a9a4e3957c7be08924cf8db959f77d 270 PANTHER PTHR10000 1 265 1.5E-91 T 22-04-2016 YE2513 d7a9a4e3957c7be08924cf8db959f77d 270 SUPERFAMILY SSF56784 1 264 7.62E-67 T 22-04-2016 IPR023214 HAD-like domain YE2513 d7a9a4e3957c7be08924cf8db959f77d 270 Gene3D G3DSA:3.30.1240.10 84 178 1.6E-30 T 22-04-2016 YE2513 d7a9a4e3957c7be08924cf8db959f77d 270 Gene3D G3DSA:3.40.50.1000 1 74 1.3E-49 T 22-04-2016 IPR023214 HAD-like domain YE2513 d7a9a4e3957c7be08924cf8db959f77d 270 Gene3D G3DSA:3.40.50.1000 179 265 1.3E-49 T 22-04-2016 IPR023214 HAD-like domain YE2513 d7a9a4e3957c7be08924cf8db959f77d 270 PANTHER PTHR10000:SF27 1 265 1.5E-91 T 22-04-2016 YE2513 d7a9a4e3957c7be08924cf8db959f77d 270 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 259 6.1E-58 T 22-04-2016 IPR023214 HAD-like domain YE2513 d7a9a4e3957c7be08924cf8db959f77d 270 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 259 1.7E-56 T 22-04-2016 IPR000150 Cof protein GO:0016787 YE2513 d7a9a4e3957c7be08924cf8db959f77d 270 ProSitePatterns PS01229 Hypothetical cof family signature 2. 213 235 - T 22-04-2016 YE1825 6ecc0fb5abf1fe8f637648106cd4194c 390 Pfam PF13264 Domain of unknown function (DUF4055) 248 385 2.1E-45 T 22-04-2016 IPR025129 Domain of unknown function DUF4055 YE2998 6088e44fdcafcb4814bd98c4040f0b7e 344 PANTHER PTHR34388 1 342 1.1E-90 T 22-04-2016 YE2998 6088e44fdcafcb4814bd98c4040f0b7e 344 Gene3D G3DSA:1.10.8.60 143 222 9.9E-38 T 22-04-2016 YE2998 6088e44fdcafcb4814bd98c4040f0b7e 344 Gene3D G3DSA:1.20.272.20 223 341 2.3E-51 T 22-04-2016 YE2998 6088e44fdcafcb4814bd98c4040f0b7e 344 Pfam PF06144 DNA polymerase III, delta subunit 21 190 3.7E-43 T 22-04-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 YE2998 6088e44fdcafcb4814bd98c4040f0b7e 344 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 18 332 8.2E-101 T 22-04-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 YE2998 6088e44fdcafcb4814bd98c4040f0b7e 344 SUPERFAMILY SSF52540 1 210 6.54E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2998 6088e44fdcafcb4814bd98c4040f0b7e 344 Gene3D G3DSA:3.40.50.300 1 140 2.6E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2998 6088e44fdcafcb4814bd98c4040f0b7e 344 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 214 337 2.2E-61 T 22-04-2016 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE2998 6088e44fdcafcb4814bd98c4040f0b7e 344 SUPERFAMILY SSF48019 212 333 3.32E-36 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 YE1084 a45e09a2f0593d0fcc38d0dbbf3d4492 188 Pfam PF12318 Membrane bound FAD containing D-sorbitol dehydrogenase 33 184 4.4E-38 T 22-04-2016 IPR024651 FAD-containing D-sorbitol dehydrogenase small subunit YE0510 dc46a00bca1b3416b1c949cf274259a5 84 Pfam PF04221 RelB antitoxin 1 62 5.0E-16 T 22-04-2016 IPR007337 RelB antitoxin/Antitoxin DinJ YE0510 dc46a00bca1b3416b1c949cf274259a5 84 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 84 3.5E-25 T 22-04-2016 IPR007337 RelB antitoxin/Antitoxin DinJ YE3877 4ebeb17823ec19d9d4a852567c7445e5 285 PANTHER PTHR32552 5 278 4.9E-72 T 22-04-2016 YE3877 4ebeb17823ec19d9d4a852567c7445e5 285 Gene3D G3DSA:3.30.420.10 108 267 1.8E-39 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE3877 4ebeb17823ec19d9d4a852567c7445e5 285 Pfam PF00665 Integrase core domain 114 229 6.5E-33 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YE3877 4ebeb17823ec19d9d4a852567c7445e5 285 SUPERFAMILY SSF53098 107 269 1.9E-40 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE1058 17387d604b6e92cfcd041785aec5fe3c 128 PANTHER PTHR10093 1 128 4.8E-104 T 22-04-2016 YE1058 17387d604b6e92cfcd041785aec5fe3c 128 Gene3D G3DSA:3.90.1010.10 2 126 1.7E-55 T 22-04-2016 YE1058 17387d604b6e92cfcd041785aec5fe3c 128 Pfam PF01592 NifU-like N terminal domain 2 126 1.2E-56 T 22-04-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 YE1058 17387d604b6e92cfcd041785aec5fe3c 128 PANTHER PTHR10093:SF3 1 128 4.8E-104 T 22-04-2016 YE1058 17387d604b6e92cfcd041785aec5fe3c 128 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 1.6E-68 T 22-04-2016 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 YE1058 17387d604b6e92cfcd041785aec5fe3c 128 SUPERFAMILY SSF82649 1 125 1.47E-47 T 22-04-2016 YE0170 ae5ec7a6831a8160d4033ea3c3671338 353 Pfam PF02706 Chain length determinant protein 17 174 6.3E-14 T 22-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 YE0170 ae5ec7a6831a8160d4033ea3c3671338 353 PANTHER PTHR32309:SF16 1 351 1.1E-245 T 22-04-2016 YE0170 ae5ec7a6831a8160d4033ea3c3671338 353 Hamap MF_02025 ECA polysaccharide chain length modulation protein [wzzE]. 10 350 58.0 T 22-04-2016 IPR032895 ECA polysaccharide chain length modulation protein WzzE GO:0009246|GO:0016021 UniPathway: UPA00566 YE0170 ae5ec7a6831a8160d4033ea3c3671338 353 Gene3D G3DSA:3.30.1890.10 56 224 7.3E-89 T 22-04-2016 YE0170 ae5ec7a6831a8160d4033ea3c3671338 353 Gene3D G3DSA:3.30.1890.10 260 321 7.3E-89 T 22-04-2016 YE0170 ae5ec7a6831a8160d4033ea3c3671338 353 SUPERFAMILY SSF160355 56 321 1.2E-83 T 22-04-2016 YE0170 ae5ec7a6831a8160d4033ea3c3671338 353 PANTHER PTHR32309 1 351 1.1E-245 T 22-04-2016 YE2849 f3d813b59b962919f4eda2f2c854b832 335 Gene3D G3DSA:3.40.50.150 124 232 2.7E-11 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE2849 f3d813b59b962919f4eda2f2c854b832 335 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 26 325 54.31 T 22-04-2016 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 YE2849 f3d813b59b962919f4eda2f2c854b832 335 SUPERFAMILY SSF53335 63 321 6.78E-31 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE2849 f3d813b59b962919f4eda2f2c854b832 335 Pfam PF05971 Protein of unknown function (DUF890) 25 322 1.7E-123 T 22-04-2016 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 YE2849 f3d813b59b962919f4eda2f2c854b832 335 PANTHER PTHR13393:SF0 13 330 7.9E-140 T 22-04-2016 YE2849 f3d813b59b962919f4eda2f2c854b832 335 PIRSF PIRSF029038 15 335 5.0E-154 T 22-04-2016 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 YE2849 f3d813b59b962919f4eda2f2c854b832 335 PANTHER PTHR13393 13 330 7.9E-140 T 22-04-2016 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 YE0488 3aa57d6c20d6783d547bcc80c16c556b 292 PANTHER PTHR24220 7 55 2.3E-113 T 22-04-2016 YE0488 3aa57d6c20d6783d547bcc80c16c556b 292 PANTHER PTHR24220 74 269 2.3E-113 T 22-04-2016 YE0488 3aa57d6c20d6783d547bcc80c16c556b 292 SUPERFAMILY SSF52540 10 245 2.55E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0488 3aa57d6c20d6783d547bcc80c16c556b 292 Gene3D G3DSA:3.40.50.300 5 261 4.9E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0488 3aa57d6c20d6783d547bcc80c16c556b 292 PANTHER PTHR24220:SF442 7 55 2.3E-113 T 22-04-2016 YE0488 3aa57d6c20d6783d547bcc80c16c556b 292 PANTHER PTHR24220:SF442 74 269 2.3E-113 T 22-04-2016 YE0488 3aa57d6c20d6783d547bcc80c16c556b 292 Pfam PF00005 ABC transporter 22 191 6.4E-22 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE0488 3aa57d6c20d6783d547bcc80c16c556b 292 SMART SM00382 29 241 6.3E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain YE3442 3fc720d22d13b63ebc62c378331567f4 239 PANTHER PTHR23417 5 239 1.7E-91 T 22-04-2016 YE3442 3fc720d22d13b63ebc62c378331567f4 239 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 49 238 2.2E-71 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 YE3442 3fc720d22d13b63ebc62c378331567f4 239 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 24 238 31.332 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 YE3442 3fc720d22d13b63ebc62c378331567f4 239 PANTHER PTHR23417:SF14 5 239 1.7E-91 T 22-04-2016 YE3442 3fc720d22d13b63ebc62c378331567f4 239 SUPERFAMILY SSF53335 17 237 2.89E-42 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE3442 3fc720d22d13b63ebc62c378331567f4 239 Pfam PF02390 Putative methyltransferase 64 233 2.9E-61 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 YE3442 3fc720d22d13b63ebc62c378331567f4 239 Gene3D G3DSA:3.40.50.150 36 203 2.1E-17 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE0772 540754136b6fbfece9d7255137264806 250 Gene3D G3DSA:3.40.1210.10 3 247 3.7E-84 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 YE0772 540754136b6fbfece9d7255137264806 250 Pfam PF01975 Survival protein SurE 4 181 7.7E-56 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 YE0772 540754136b6fbfece9d7255137264806 250 SUPERFAMILY SSF64167 2 246 9.29E-81 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 YE0772 540754136b6fbfece9d7255137264806 250 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 3 233 1.9E-75 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 YE0772 540754136b6fbfece9d7255137264806 250 PANTHER PTHR30457 2 249 1.6E-101 T 22-04-2016 YE0772 540754136b6fbfece9d7255137264806 250 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 2 250 39.287 T 22-04-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 YE3835 031aaa81baff80758433e334e6a988ed 369 PANTHER PTHR30085 66 369 3.4E-178 T 22-04-2016 YE3835 031aaa81baff80758433e334e6a988ed 369 PANTHER PTHR30085:SF3 66 369 3.4E-178 T 22-04-2016 YE3835 031aaa81baff80758433e334e6a988ed 369 SUPERFAMILY SSF161098 156 354 1.7E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE3835 031aaa81baff80758433e334e6a988ed 369 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 158 254 4.7E-20 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 YE3835 031aaa81baff80758433e334e6a988ed 369 Gene3D G3DSA:1.10.3720.10 155 363 8.8E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE3835 031aaa81baff80758433e334e6a988ed 369 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 176 362 1.4E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE2616 5c469f3088d83c4658536cc6f44d454a 319 SUPERFAMILY SSF46689 270 317 1.7E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE2616 5c469f3088d83c4658536cc6f44d454a 319 Gene3D G3DSA:1.10.10.60 270 317 5.6E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE2616 5c469f3088d83c4658536cc6f44d454a 319 SMART SM00342 233 316 2.3E-24 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YE2616 5c469f3088d83c4658536cc6f44d454a 319 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 285 300 1.0E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YE2616 5c469f3088d83c4658536cc6f44d454a 319 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 300 316 1.0E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 YE2616 5c469f3088d83c4658536cc6f44d454a 319 Pfam PF12833 Helix-turn-helix domain 239 317 1.7E-18 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YE2616 5c469f3088d83c4658536cc6f44d454a 319 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 270 312 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 YE2616 5c469f3088d83c4658536cc6f44d454a 319 PANTHER PTHR11019:SF61 10 319 2.9E-107 T 22-04-2016 YE2616 5c469f3088d83c4658536cc6f44d454a 319 PANTHER PTHR11019 10 319 2.9E-107 T 22-04-2016 YE3929 8fe87bc8d61e31dd523adc4cb6199cb6 156 PANTHER PTHR11205 1 156 1.0E-96 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 YE3929 8fe87bc8d61e31dd523adc4cb6199cb6 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 3.4E-71 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 YE3929 8fe87bc8d61e31dd523adc4cb6199cb6 156 Gene3D G3DSA:1.10.455.10 8 156 2.4E-67 T 22-04-2016 IPR023798 Ribosomal protein S7 domain YE3929 8fe87bc8d61e31dd523adc4cb6199cb6 156 PIRSF PIRSF002122 3 156 1.9E-63 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 YE3929 8fe87bc8d61e31dd523adc4cb6199cb6 156 SUPERFAMILY SSF47973 6 149 7.59E-60 T 22-04-2016 IPR023798 Ribosomal protein S7 domain YE3929 8fe87bc8d61e31dd523adc4cb6199cb6 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 22-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 YE3929 8fe87bc8d61e31dd523adc4cb6199cb6 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 3.5E-65 T 22-04-2016 IPR023798 Ribosomal protein S7 domain YE3929 8fe87bc8d61e31dd523adc4cb6199cb6 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.144 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 YE2135 991c139bfb214b085afda55a7b794fe0 196 Pfam PF06930 Protein of unknown function (DUF1282) 8 179 8.4E-49 T 22-04-2016 IPR009698 Protein of unknown function DUF1282 YE3646 7c8ac506d9e6eb2092dce4d3226df437 336 PANTHER PTHR30572 95 318 2.5E-85 T 22-04-2016 YE3646 7c8ac506d9e6eb2092dce4d3226df437 336 TIGRFAM TIGR02797 exbB: tonB-system energizer ExbB 103 314 1.0E-94 T 22-04-2016 IPR014164 TonB-system energizer ExbB type-1 GO:0006810|GO:0016020 YE3646 7c8ac506d9e6eb2092dce4d3226df437 336 Pfam PF01618 MotA/TolQ/ExbB proton channel family 186 299 6.5E-35 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 YE3646 7c8ac506d9e6eb2092dce4d3226df437 336 PANTHER PTHR30572:SF11 95 318 2.5E-85 T 22-04-2016 YE3574 8059bb89fa56ec92a9c2fea2e1aa3759 261 PANTHER PTHR30487:SF0 1 256 8.9E-94 T 22-04-2016 YE3574 8059bb89fa56ec92a9c2fea2e1aa3759 261 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 127 144 1.0E-23 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- YE3574 8059bb89fa56ec92a9c2fea2e1aa3759 261 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 195 206 1.0E-23 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- YE3574 8059bb89fa56ec92a9c2fea2e1aa3759 261 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 184 194 1.0E-23 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- YE3574 8059bb89fa56ec92a9c2fea2e1aa3759 261 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 207 222 1.0E-23 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- YE3574 8059bb89fa56ec92a9c2fea2e1aa3759 261 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 17 106 1.8E-33 T 22-04-2016 IPR010627 Peptidase A24A, N-terminal KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- YE3574 8059bb89fa56ec92a9c2fea2e1aa3759 261 PANTHER PTHR30487 1 256 8.9E-94 T 22-04-2016 YE3574 8059bb89fa56ec92a9c2fea2e1aa3759 261 Pfam PF01478 Type IV leader peptidase family 119 227 8.0E-23 T 22-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 YE1311 5ace836c71ee587be7159eea50ab033f 303 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 284 2.1E-148 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 YE1311 5ace836c71ee587be7159eea50ab033f 303 SUPERFAMILY SSF52096 25 283 2.33E-87 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YE1311 5ace836c71ee587be7159eea50ab033f 303 PANTHER PTHR22855:SF17 1 288 4.1E-184 T 22-04-2016 YE1311 5ace836c71ee587be7159eea50ab033f 303 PANTHER PTHR22855 1 288 4.1E-184 T 22-04-2016 YE1311 5ace836c71ee587be7159eea50ab033f 303 Pfam PF01039 Carboxyl transferase domain 92 239 4.4E-18 T 22-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 YE1311 5ace836c71ee587be7159eea50ab033f 303 Gene3D G3DSA:3.90.226.10 18 285 2.8E-77 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YE1311 5ace836c71ee587be7159eea50ab033f 303 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 38.456 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 YE1311 5ace836c71ee587be7159eea50ab033f 303 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 1.6E-36 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 YE1311 5ace836c71ee587be7159eea50ab033f 303 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 1.6E-36 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 YE1311 5ace836c71ee587be7159eea50ab033f 303 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 1.6E-36 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 YE1311 5ace836c71ee587be7159eea50ab033f 303 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 1.6E-36 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 YE1311 5ace836c71ee587be7159eea50ab033f 303 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 1.6E-36 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 YE0296 89e74889820306ad0b8b184f70fe0050 261 PANTHER PTHR22769 85 259 1.3E-53 T 22-04-2016 YE0296 89e74889820306ad0b8b184f70fe0050 261 SUPERFAMILY SSF55811 79 241 4.9E-39 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YE0296 89e74889820306ad0b8b184f70fe0050 261 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 93 124 4.5E-8 T 22-04-2016 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 YE0296 89e74889820306ad0b8b184f70fe0050 261 ProSitePatterns PS00893 Nudix box signature. 159 180 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 YE0296 89e74889820306ad0b8b184f70fe0050 261 SUPERFAMILY SSF55811 2 96 4.46E-31 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YE0296 89e74889820306ad0b8b184f70fe0050 261 Pfam PF00293 NUDIX domain 131 234 1.4E-15 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 YE0296 89e74889820306ad0b8b184f70fe0050 261 Hamap MF_00297 NADH pyrophosphatase [nudC]. 1 257 44.182 T 22-04-2016 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 YE0296 89e74889820306ad0b8b184f70fe0050 261 PANTHER PTHR22769:SF7 85 259 1.3E-53 T 22-04-2016 YE0296 89e74889820306ad0b8b184f70fe0050 261 Gene3D G3DSA:3.90.79.10 93 244 4.6E-40 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YE3259 915a34b7ae2eb7608c5dd9862ea61b8d 229 Pfam PF04170 NlpE N-terminal domain 40 124 1.4E-24 T 22-04-2016 IPR007298 Copper resistance lipoprotein NlpE YE3259 915a34b7ae2eb7608c5dd9862ea61b8d 229 Pfam PF17185 NlpE C-terminal OB domain 138 227 2.2E-37 T 22-04-2016 IPR033450 NlpE, C-terminal OB domain YE0275 bc996d9f5f827c0ef49143e6097cf9e7 319 TIGRFAM TIGR00122 birA_repr_reg: biotin operon repressor 6 73 8.3E-24 T 22-04-2016 IPR004409 Biotin operon repressor, helix-turn-helix domain GO:0006355 KEGG: 00780+6.3.4.15 YE0275 bc996d9f5f827c0ef49143e6097cf9e7 319 SUPERFAMILY SSF46785 7 60 3.49E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0275 bc996d9f5f827c0ef49143e6097cf9e7 319 Gene3D G3DSA:3.30.930.10 77 269 2.1E-59 T 22-04-2016 YE0275 bc996d9f5f827c0ef49143e6097cf9e7 319 Pfam PF08279 HTH domain 15 58 6.9E-10 T 22-04-2016 IPR013196 Helix-turn-helix, type 11 YE0275 bc996d9f5f827c0ef49143e6097cf9e7 319 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 81 317 2.4E-77 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 YE0275 bc996d9f5f827c0ef49143e6097cf9e7 319 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 7 317 32.575 T 22-04-2016 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 YE0275 bc996d9f5f827c0ef49143e6097cf9e7 319 Pfam PF02237 Biotin protein ligase C terminal domain 272 317 1.1E-12 T 22-04-2016 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15 YE0275 bc996d9f5f827c0ef49143e6097cf9e7 319 Pfam PF03099 Biotin/lipoate A/B protein ligase family 84 208 4.5E-25 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 YE0275 bc996d9f5f827c0ef49143e6097cf9e7 319 SUPERFAMILY SSF50037 271 317 6.41E-12 T 22-04-2016 IPR008988 Transcriptional repressor, C-terminal YE0275 bc996d9f5f827c0ef49143e6097cf9e7 319 Gene3D G3DSA:1.10.10.10 3 63 1.6E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0275 bc996d9f5f827c0ef49143e6097cf9e7 319 PANTHER PTHR12835 8 317 1.4E-99 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 YE0275 bc996d9f5f827c0ef49143e6097cf9e7 319 Gene3D G3DSA:2.30.30.100 271 318 2.9E-24 T 22-04-2016 YE0275 bc996d9f5f827c0ef49143e6097cf9e7 319 SUPERFAMILY SSF55681 71 268 5.54E-59 T 22-04-2016 YE2674 0669dc8a102b87d623c90147c0e11486 390 Pfam PF00144 Beta-lactamase 19 380 4.9E-65 T 22-04-2016 IPR001466 Beta-lactamase-related YE2674 0669dc8a102b87d623c90147c0e11486 390 PANTHER PTHR22935:SF77 17 380 1.4E-79 T 22-04-2016 YE2674 0669dc8a102b87d623c90147c0e11486 390 PANTHER PTHR22935 17 380 1.4E-79 T 22-04-2016 YE2674 0669dc8a102b87d623c90147c0e11486 390 Gene3D G3DSA:3.40.710.10 16 387 2.6E-83 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YE2674 0669dc8a102b87d623c90147c0e11486 390 SUPERFAMILY SSF56601 17 387 9.13E-89 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YE0426 a4526fded23ab6095ea7f84f35d86ff4 97 Gene3D G3DSA:3.30.110.60 1 94 6.0E-34 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 YE0426 a4526fded23ab6095ea7f84f35d86ff4 97 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 97 4.0E-43 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 YE0426 a4526fded23ab6095ea7f84f35d86ff4 97 SUPERFAMILY SSF75471 1 96 1.57E-31 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 YE0426 a4526fded23ab6095ea7f84f35d86ff4 97 SMART SM01103 3 86 2.5E-41 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 YE0426 a4526fded23ab6095ea7f84f35d86ff4 97 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 94 9.7E-39 T 22-04-2016 IPR017924 RNA-binding protein YhbY GO:0003723 YE0426 a4526fded23ab6095ea7f84f35d86ff4 97 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 3.2E-23 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 YE0426 a4526fded23ab6095ea7f84f35d86ff4 97 PANTHER PTHR31846 1 97 5.6E-44 T 22-04-2016 YE1549 ba7a8f49b548fee007409202e039c8b2 60 SUPERFAMILY SSF158997 1 54 4.71E-20 T 22-04-2016 YE1549 ba7a8f49b548fee007409202e039c8b2 60 Pfam PF03966 Trm112p-like protein 2 41 1.5E-9 T 22-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 YE1549 ba7a8f49b548fee007409202e039c8b2 60 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 27.097 T 22-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 YE1549 ba7a8f49b548fee007409202e039c8b2 60 Gene3D G3DSA:2.20.25.10 8 58 1.2E-24 T 22-04-2016 YE1549 ba7a8f49b548fee007409202e039c8b2 60 PANTHER PTHR33505 1 58 1.0E-25 T 22-04-2016 YE3417 23fae9cc630cbfba35d89eb6904df53d 250 PANTHER PTHR22726:SF4 1 250 3.9E-149 T 22-04-2016 YE3417 23fae9cc630cbfba35d89eb6904df53d 250 PANTHER PTHR22726 1 250 3.9E-149 T 22-04-2016 YE3417 23fae9cc630cbfba35d89eb6904df53d 250 Pfam PF01435 Peptidase family M48 77 245 1.8E-25 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 YE3417 23fae9cc630cbfba35d89eb6904df53d 250 Gene3D G3DSA:3.30.2010.10 66 146 1.5E-21 T 22-04-2016 YE0328 757bc77156a04f10b63005fe2af5e5eb 334 PANTHER PTHR30472:SF3 4 333 1.5E-160 T 22-04-2016 YE0328 757bc77156a04f10b63005fe2af5e5eb 334 Pfam PF01032 FecCD transport family 18 327 5.1E-95 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 YE0328 757bc77156a04f10b63005fe2af5e5eb 334 SUPERFAMILY SSF81345 3 327 7.06E-88 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YE0328 757bc77156a04f10b63005fe2af5e5eb 334 Gene3D G3DSA:1.10.3470.10 7 331 7.5E-109 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YE0328 757bc77156a04f10b63005fe2af5e5eb 334 PANTHER PTHR30472 4 333 1.5E-160 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 YE3305 404160e872aa7e4cbbf99a425f2e61c6 269 PANTHER PTHR10953 10 165 1.8E-153 T 22-04-2016 YE3305 404160e872aa7e4cbbf99a425f2e61c6 269 PANTHER PTHR10953 198 266 1.8E-153 T 22-04-2016 YE3305 404160e872aa7e4cbbf99a425f2e61c6 269 SUPERFAMILY SSF69572 6 259 7.98E-63 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 YE3305 404160e872aa7e4cbbf99a425f2e61c6 269 PANTHER PTHR10953:SF159 10 165 1.8E-153 T 22-04-2016 YE3305 404160e872aa7e4cbbf99a425f2e61c6 269 PANTHER PTHR10953:SF159 198 266 1.8E-153 T 22-04-2016 YE3305 404160e872aa7e4cbbf99a425f2e61c6 269 Pfam PF00899 ThiF family 28 261 1.5E-37 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 YE3305 404160e872aa7e4cbbf99a425f2e61c6 269 Gene3D G3DSA:3.40.50.720 4 262 9.6E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2917 111220dca2f9a33abc75392ce921e6da 338 SUPERFAMILY SSF51735 1 336 1.31E-101 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2917 111220dca2f9a33abc75392ce921e6da 338 PANTHER PTHR10366 2 336 6.9E-152 T 22-04-2016 YE2917 111220dca2f9a33abc75392ce921e6da 338 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 335 1.5E-144 T 22-04-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|UniPathway: UPA00214 YE2917 111220dca2f9a33abc75392ce921e6da 338 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 324 3.4E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2917 111220dca2f9a33abc75392ce921e6da 338 PANTHER PTHR10366:SF39 2 336 6.9E-152 T 22-04-2016 YE2917 111220dca2f9a33abc75392ce921e6da 338 Gene3D G3DSA:3.90.25.10 264 337 4.1E-52 T 22-04-2016 YE2917 111220dca2f9a33abc75392ce921e6da 338 Gene3D G3DSA:3.90.25.10 180 232 4.1E-52 T 22-04-2016 YE2917 111220dca2f9a33abc75392ce921e6da 338 Gene3D G3DSA:3.40.50.720 1 179 1.3E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain YE0901 36461c1a26375db95bb821e08cfd8f16 453 Pfam PF00501 AMP-binding enzyme 124 287 6.2E-12 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 YE0901 36461c1a26375db95bb821e08cfd8f16 453 Gene3D G3DSA:3.40.50.980 128 201 8.6E-8 T 22-04-2016 YE0901 36461c1a26375db95bb821e08cfd8f16 453 Pfam PF13193 AMP-binding enzyme C-terminal domain 359 442 2.2E-5 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain YE0901 36461c1a26375db95bb821e08cfd8f16 453 Gene3D G3DSA:3.30.300.30 345 451 5.6E-15 T 22-04-2016 YE0901 36461c1a26375db95bb821e08cfd8f16 453 ProSitePatterns PS00455 Putative AMP-binding domain signature. 134 145 - T 22-04-2016 IPR020845 AMP-binding, conserved site YE0901 36461c1a26375db95bb821e08cfd8f16 453 SUPERFAMILY SSF56801 13 452 1.83E-44 T 22-04-2016 YE3603a f56988ebe636fc775620016345ea953f 113 PANTHER PTHR34535 2 113 8.2E-48 T 22-04-2016 YE3603a f56988ebe636fc775620016345ea953f 113 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 113 4.9E-37 T 22-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 YE3603a f56988ebe636fc775620016345ea953f 113 ProSitePatterns PS01249 Hydrogenases expression/synthesis hypA family signature. 34 76 - T 22-04-2016 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site YE3603a f56988ebe636fc775620016345ea953f 113 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 112 7.1E-31 T 22-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 YE3603a f56988ebe636fc775620016345ea953f 113 Hamap MF_00213 Probable hydrogenase nickel incorporation protein HypA [hypA]. 1 113 24.04 T 22-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 YE3603a f56988ebe636fc775620016345ea953f 113 PANTHER PTHR34535:SF2 2 113 8.2E-48 T 22-04-2016 YE3603a f56988ebe636fc775620016345ea953f 113 PIRSF PIRSF004761 1 113 1.8E-36 T 22-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 YE3115 e170c44f73704e57c10cc6de67d4d054 67 Pfam PF05321 Haemolysin expression modulating protein 8 64 4.0E-33 T 22-04-2016 IPR007985 Haemolysin expression modulating, HHA YE3115 e170c44f73704e57c10cc6de67d4d054 67 SUPERFAMILY SSF68989 1 67 1.22E-30 T 22-04-2016 IPR007985 Haemolysin expression modulating, HHA YE3115 e170c44f73704e57c10cc6de67d4d054 67 Gene3D G3DSA:1.20.1280.40 1 67 4.8E-37 T 22-04-2016 IPR007985 Haemolysin expression modulating, HHA YE0643 4474d6c3f227441b0f39e85ba0bab9b3 267 Pfam PF13988 Protein of unknown function (DUF4225) 77 237 1.4E-49 T 22-04-2016 IPR025320 Protein of unknown function DUF4225 YE4145 2fa34fef002f78de2c8dbfa36143b9e1 216 Pfam PF01810 LysE type translocator 25 208 3.0E-13 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 YE4145 2fa34fef002f78de2c8dbfa36143b9e1 216 PANTHER PTHR30086 14 214 1.7E-42 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 YE4145 2fa34fef002f78de2c8dbfa36143b9e1 216 PANTHER PTHR30086:SF12 14 214 1.7E-42 T 22-04-2016 YE2758 948451ce7490dd53d059bb0cc92003ee 476 PANTHER PTHR11046 1 476 1.3E-299 T 22-04-2016 YE2758 948451ce7490dd53d059bb0cc92003ee 476 SUPERFAMILY SSF53098 8 474 1.08E-135 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE2758 948451ce7490dd53d059bb0cc92003ee 476 PIRSF PIRSF000977 2 476 5.6E-204 T 22-04-2016 IPR023607 Exodeoxyribonuclease I GO:0004529 YE2758 948451ce7490dd53d059bb0cc92003ee 476 PANTHER PTHR11046:SF2 1 476 1.3E-299 T 22-04-2016 IPR023607 Exodeoxyribonuclease I GO:0004529 YE2758 948451ce7490dd53d059bb0cc92003ee 476 Pfam PF08411 Exonuclease C-terminal 211 472 1.1E-108 T 22-04-2016 IPR013620 Exonuclease C-terminal GO:0006281|GO:0008852 YE2758 948451ce7490dd53d059bb0cc92003ee 476 Gene3D G3DSA:3.30.420.10 3 199 4.4E-84 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE2758 948451ce7490dd53d059bb0cc92003ee 476 Pfam PF00929 Exonuclease 12 191 7.0E-26 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III YE2437 e86cd2ebe61bbf10d6fa6993356689ca 197 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 4 183 35.408 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 YE2437 e86cd2ebe61bbf10d6fa6993356689ca 197 Gene3D G3DSA:3.40.50.1470 4 193 3.2E-70 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 YE2437 e86cd2ebe61bbf10d6fa6993356689ca 197 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 4 191 2.9E-68 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 YE2437 e86cd2ebe61bbf10d6fa6993356689ca 197 PANTHER PTHR17224:SF1 1 193 3.8E-82 T 22-04-2016 YE2437 e86cd2ebe61bbf10d6fa6993356689ca 197 SUPERFAMILY SSF53178 4 193 1.05E-68 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 YE2437 e86cd2ebe61bbf10d6fa6993356689ca 197 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 17 30 - T 22-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 YE2437 e86cd2ebe61bbf10d6fa6993356689ca 197 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 111 121 - T 22-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 YE2437 e86cd2ebe61bbf10d6fa6993356689ca 197 Pfam PF01195 Peptidyl-tRNA hydrolase 6 188 3.8E-52 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 YE2437 e86cd2ebe61bbf10d6fa6993356689ca 197 PANTHER PTHR17224 1 193 3.8E-82 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 YE3961 c1e415c8c380cd5b8dae0092ca2c16a4 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 141 158 1.1E-44 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 YE3961 c1e415c8c380cd5b8dae0092ca2c16a4 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 166 177 1.1E-44 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 YE3961 c1e415c8c380cd5b8dae0092ca2c16a4 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 5 20 1.1E-44 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 YE3961 c1e415c8c380cd5b8dae0092ca2c16a4 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 77 93 1.1E-44 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 YE3961 c1e415c8c380cd5b8dae0092ca2c16a4 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 112 132 1.1E-44 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 YE3961 c1e415c8c380cd5b8dae0092ca2c16a4 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 192 204 1.1E-44 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 YE3961 c1e415c8c380cd5b8dae0092ca2c16a4 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 98 111 1.1E-44 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 YE3961 c1e415c8c380cd5b8dae0092ca2c16a4 437 SUPERFAMILY SSF56327 172 435 7.94E-91 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 YE3961 c1e415c8c380cd5b8dae0092ca2c16a4 437 PANTHER PTHR32092 1 437 5.1E-241 T 22-04-2016 YE3961 c1e415c8c380cd5b8dae0092ca2c16a4 437 PANTHER PTHR32092:SF5 1 437 5.1E-241 T 22-04-2016 YE3961 c1e415c8c380cd5b8dae0092ca2c16a4 437 Gene3D G3DSA:3.40.50.720 1 169 9.1E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3961 c1e415c8c380cd5b8dae0092ca2c16a4 437 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 196 410 9.7E-50 T 22-04-2016 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 YE3961 c1e415c8c380cd5b8dae0092ca2c16a4 437 Pfam PF02056 Family 4 glycosyl hydrolase 5 186 1.6E-54 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 YE3961 c1e415c8c380cd5b8dae0092ca2c16a4 437 Gene3D G3DSA:3.90.110.10 170 434 5.6E-98 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 YE3961 c1e415c8c380cd5b8dae0092ca2c16a4 437 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 141 171 - T 22-04-2016 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 YE3961 c1e415c8c380cd5b8dae0092ca2c16a4 437 SUPERFAMILY SSF51735 2 169 1.04E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2983 9efe1c3d751e1834e0ac2bdd77b939e3 554 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 371 1.5E-123 T 22-04-2016 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|UniPathway: UPA00134 YE2983 9efe1c3d751e1834e0ac2bdd77b939e3 554 PANTHER PTHR11772 2 538 0.0 T 22-04-2016 YE2983 9efe1c3d751e1834e0ac2bdd77b939e3 554 SUPERFAMILY SSF56235 1 196 8.58E-58 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal YE2983 9efe1c3d751e1834e0ac2bdd77b939e3 554 SUPERFAMILY SSF52402 212 483 8.64E-75 T 22-04-2016 YE2983 9efe1c3d751e1834e0ac2bdd77b939e3 554 Gene3D G3DSA:3.60.20.10 2 191 3.8E-68 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal YE2983 9efe1c3d751e1834e0ac2bdd77b939e3 554 Pfam PF13537 Glutamine amidotransferase domain 48 166 2.4E-40 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain YE2983 9efe1c3d751e1834e0ac2bdd77b939e3 554 Pfam PF00733 Asparagine synthase 211 366 2.0E-57 T 22-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 YE2983 9efe1c3d751e1834e0ac2bdd77b939e3 554 Pfam PF00733 Asparagine synthase 367 511 6.0E-41 T 22-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 YE2983 9efe1c3d751e1834e0ac2bdd77b939e3 554 Gene3D G3DSA:3.40.50.620 192 510 1.7E-117 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YE2983 9efe1c3d751e1834e0ac2bdd77b939e3 554 PANTHER PTHR11772:SF11 2 538 0.0 T 22-04-2016 YE0675 f0a19b81c89149eb99e5c4f86fbd8ef8 285 PANTHER PTHR35851 9 269 2.4E-85 T 22-04-2016 YE0675 f0a19b81c89149eb99e5c4f86fbd8ef8 285 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 26 252 24.789 T 22-04-2016 IPR026579 Cell division protein FtsQ GO:0000917 YE0675 f0a19b81c89149eb99e5c4f86fbd8ef8 285 Pfam PF08478 POTRA domain, FtsQ-type 57 126 3.6E-22 T 22-04-2016 IPR013685 Polypeptide-transport-associated, FtsQ-type YE0675 f0a19b81c89149eb99e5c4f86fbd8ef8 285 PANTHER PTHR35851:SF1 9 269 2.4E-85 T 22-04-2016 YE0675 f0a19b81c89149eb99e5c4f86fbd8ef8 285 Pfam PF03799 Cell division protein FtsQ 130 244 4.0E-26 T 22-04-2016 IPR005548 Cell division protein FtsQ/DivIB YE0179 3b532ba3267a987b29a95ac684cdb1b9 458 Hamap MF_01003 Probable ECA polymerase [wzyE]. 1 447 38.447 T 22-04-2016 IPR010691 Probable ECA polymerase WzyE GO:0009246|GO:0016021 UniPathway: UPA00566 YE0179 3b532ba3267a987b29a95ac684cdb1b9 458 Pfam PF06899 WzyE protein, O-antigen assembly polymerase 1 441 3.8E-262 T 22-04-2016 YE1512 0e58fd26bb39418b90128b17398db28f 554 SUPERFAMILY SSF52540 1 334 3.43E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1512 0e58fd26bb39418b90128b17398db28f 554 PANTHER PTHR32182 1 553 8.0E-289 T 22-04-2016 YE1512 0e58fd26bb39418b90128b17398db28f 554 Pfam PF11398 Protein of unknown function (DUF2813) 1 377 6.9E-163 T 22-04-2016 IPR022602 Protein of unknown function DUF2813 YE1512 0e58fd26bb39418b90128b17398db28f 554 PANTHER PTHR32182:SF12 1 553 8.0E-289 T 22-04-2016 YE1512 0e58fd26bb39418b90128b17398db28f 554 Gene3D G3DSA:3.40.50.300 1 347 8.3E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1093 b22046a10d6044f0b23d869e4fcbc9b2 256 PANTHER PTHR30363:SF15 1 251 1.8E-124 T 22-04-2016 YE1093 b22046a10d6044f0b23d869e4fcbc9b2 256 Gene3D G3DSA:1.10.10.10 1 59 3.0E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1093 b22046a10d6044f0b23d869e4fcbc9b2 256 PANTHER PTHR30363 1 251 1.8E-124 T 22-04-2016 YE1093 b22046a10d6044f0b23d869e4fcbc9b2 256 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 YE1093 b22046a10d6044f0b23d869e4fcbc9b2 256 SMART SM01134 72 233 1.9E-71 T 22-04-2016 YE1093 b22046a10d6044f0b23d869e4fcbc9b2 256 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 2.0E-18 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YE1093 b22046a10d6044f0b23d869e4fcbc9b2 256 Gene3D G3DSA:3.40.50.1360 75 214 7.2E-16 T 22-04-2016 YE1093 b22046a10d6044f0b23d869e4fcbc9b2 256 Pfam PF00455 DeoR C terminal sensor domain 74 232 6.1E-51 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain YE1093 b22046a10d6044f0b23d869e4fcbc9b2 256 SUPERFAMILY SSF46785 4 64 1.16E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1093 b22046a10d6044f0b23d869e4fcbc9b2 256 SMART SM00420 6 58 9.2E-19 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 YE1093 b22046a10d6044f0b23d869e4fcbc9b2 256 SUPERFAMILY SSF100950 73 233 1.07E-35 T 22-04-2016 YE1765 2455053a6906736a69ca40bce64bc56b 69 Gene3D G3DSA:2.40.50.140 4 67 1.4E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE1765 2455053a6906736a69ca40bce64bc56b 69 PRINTS PR00050 Cold shock protein signature 27 36 1.1E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YE1765 2455053a6906736a69ca40bce64bc56b 69 PRINTS PR00050 Cold shock protein signature 6 21 1.1E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YE1765 2455053a6906736a69ca40bce64bc56b 69 PRINTS PR00050 Cold shock protein signature 42 60 1.1E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YE1765 2455053a6906736a69ca40bce64bc56b 69 SUPERFAMILY SSF50249 3 68 2.06E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE1765 2455053a6906736a69ca40bce64bc56b 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 1.7E-33 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YE1765 2455053a6906736a69ca40bce64bc56b 69 PANTHER PTHR11544:SF53 1 69 1.3E-48 T 22-04-2016 YE1765 2455053a6906736a69ca40bce64bc56b 69 SMART SM00357 5 69 8.3E-32 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 YE1765 2455053a6906736a69ca40bce64bc56b 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 22-04-2016 IPR019844 Cold-shock conserved site YE1765 2455053a6906736a69ca40bce64bc56b 69 PIRSF PIRSF002599 1 69 5.3E-26 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 YE1765 2455053a6906736a69ca40bce64bc56b 69 PANTHER PTHR11544 1 69 1.3E-48 T 22-04-2016 YE2879 6aee8e9116fc6723ea0eee739b5b2bdc 91 PANTHER PTHR33884 4 91 3.6E-41 T 22-04-2016 YE2879 6aee8e9116fc6723ea0eee739b5b2bdc 91 PANTHER PTHR33884:SF1 4 91 3.6E-41 T 22-04-2016 YE2879 6aee8e9116fc6723ea0eee739b5b2bdc 91 Pfam PF04226 Transglycosylase associated protein 42 90 4.4E-15 T 22-04-2016 IPR007341 Transglycosylase-associated protein GO:0016021 YE3022 c2860dc31e7db28b1419defb11a70966 373 Gene3D G3DSA:2.60.120.650 7 204 6.6E-41 T 22-04-2016 YE3022 c2860dc31e7db28b1419defb11a70966 373 SMART SM00558 92 215 6.4E-6 T 22-04-2016 IPR003347 JmjC domain YE3022 c2860dc31e7db28b1419defb11a70966 373 SUPERFAMILY SSF51197 6 292 1.79E-73 T 22-04-2016 YE3022 c2860dc31e7db28b1419defb11a70966 373 PANTHER PTHR13096 7 326 4.8E-58 T 22-04-2016 YE3022 c2860dc31e7db28b1419defb11a70966 373 Pfam PF08007 Cupin superfamily protein 10 310 2.7E-101 T 22-04-2016 IPR003347 JmjC domain YE0019 f5e916803e471c7716a557b128927c05 328 PANTHER PTHR39573 2 328 3.1E-194 T 22-04-2016 YE0019 f5e916803e471c7716a557b128927c05 328 Gene3D G3DSA:3.90.1200.10 105 325 7.2E-46 T 22-04-2016 YE0019 f5e916803e471c7716a557b128927c05 328 Hamap MF_01497 Stress response kinase A [srkA]. 4 318 46.586 T 22-04-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 YE0019 f5e916803e471c7716a557b128927c05 328 SUPERFAMILY SSF56112 6 327 9.18E-89 T 22-04-2016 IPR011009 Protein kinase-like domain YE0019 f5e916803e471c7716a557b128927c05 328 Pfam PF01636 Phosphotransferase enzyme family 33 258 1.2E-44 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase YE0019 f5e916803e471c7716a557b128927c05 328 PANTHER PTHR39573:SF1 2 328 3.1E-194 T 22-04-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 YE3869 9f1b8c981a260d0b246ba6d0b2490dfb 135 PANTHER PTHR37819 1 135 4.2E-51 T 22-04-2016 YE3869 9f1b8c981a260d0b246ba6d0b2490dfb 135 Pfam PF06146 Phosphate-starvation-inducible E 60 122 1.7E-15 T 22-04-2016 IPR020948 Phosphate-starvation-induced PsiE-like YE3869 9f1b8c981a260d0b246ba6d0b2490dfb 135 PIRSF PIRSF029598 1 135 7.6E-48 T 22-04-2016 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 YE3869 9f1b8c981a260d0b246ba6d0b2490dfb 135 Hamap MF_01048 Protein PsiE [psiE]. 1 135 25.773 T 22-04-2016 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 YE3869 9f1b8c981a260d0b246ba6d0b2490dfb 135 PANTHER PTHR37819:SF1 1 135 4.2E-51 T 22-04-2016 YE1974 a76012ccf52282cf0dad9d053497cc42 112 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 8 108 2.5E-37 T 22-04-2016 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 YE1974 a76012ccf52282cf0dad9d053497cc42 112 PANTHER PTHR12789 5 108 3.8E-39 T 22-04-2016 YE1974 a76012ccf52282cf0dad9d053497cc42 112 Gene3D G3DSA:3.30.780.10 28 108 2.4E-34 T 22-04-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 YE1974 a76012ccf52282cf0dad9d053497cc42 112 Pfam PF01253 Translation initiation factor SUI1 32 101 5.0E-19 T 22-04-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 YE1974 a76012ccf52282cf0dad9d053497cc42 112 SUPERFAMILY SSF55159 4 104 1.44E-25 T 22-04-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 YE1974 a76012ccf52282cf0dad9d053497cc42 112 PIRSF PIRSF037511 1 108 5.7E-35 T 22-04-2016 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 YE1723 e608bb9e84ee831f7012c892f4fc969c 148 Pfam PF00293 NUDIX domain 4 114 1.4E-16 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 YE1723 e608bb9e84ee831f7012c892f4fc969c 148 PRINTS PR00502 NUDIX hydrolase family signature 31 45 3.4E-5 T 22-04-2016 IPR020476 NUDIX hydrolase YE1723 e608bb9e84ee831f7012c892f4fc969c 148 PRINTS PR00502 NUDIX hydrolase family signature 45 60 3.4E-5 T 22-04-2016 IPR020476 NUDIX hydrolase YE1723 e608bb9e84ee831f7012c892f4fc969c 148 PANTHER PTHR22769 1 145 1.2E-33 T 22-04-2016 YE1723 e608bb9e84ee831f7012c892f4fc969c 148 ProSitePatterns PS00893 Nudix box signature. 36 57 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 YE1723 e608bb9e84ee831f7012c892f4fc969c 148 PANTHER PTHR22769:SF14 1 145 1.2E-33 T 22-04-2016 YE1723 e608bb9e84ee831f7012c892f4fc969c 148 Gene3D G3DSA:3.90.79.10 2 138 2.4E-31 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YE1723 e608bb9e84ee831f7012c892f4fc969c 148 SUPERFAMILY SSF55811 2 131 1.03E-29 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YE3064 95fcb5207264a2487749c1fbd5334e43 339 Pfam PF01548 Transposase 6 146 1.8E-15 T 22-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 YE3064 95fcb5207264a2487749c1fbd5334e43 339 Pfam PF02371 Transposase IS116/IS110/IS902 family 211 287 9.1E-26 T 22-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 YE3064 95fcb5207264a2487749c1fbd5334e43 339 PANTHER PTHR33055:SF2 2 334 4.5E-137 T 22-04-2016 YE3064 95fcb5207264a2487749c1fbd5334e43 339 PANTHER PTHR33055 2 334 4.5E-137 T 22-04-2016 YE1359 95fcb5207264a2487749c1fbd5334e43 339 Pfam PF01548 Transposase 6 146 1.8E-15 T 22-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 YE1359 95fcb5207264a2487749c1fbd5334e43 339 Pfam PF02371 Transposase IS116/IS110/IS902 family 211 287 9.1E-26 T 22-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 YE1359 95fcb5207264a2487749c1fbd5334e43 339 PANTHER PTHR33055:SF2 2 334 4.5E-137 T 22-04-2016 YE1359 95fcb5207264a2487749c1fbd5334e43 339 PANTHER PTHR33055 2 334 4.5E-137 T 22-04-2016 YE1163 95fcb5207264a2487749c1fbd5334e43 339 Pfam PF01548 Transposase 6 146 1.8E-15 T 22-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 YE1163 95fcb5207264a2487749c1fbd5334e43 339 Pfam PF02371 Transposase IS116/IS110/IS902 family 211 287 9.1E-26 T 22-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 YE1163 95fcb5207264a2487749c1fbd5334e43 339 PANTHER PTHR33055:SF2 2 334 4.5E-137 T 22-04-2016 YE1163 95fcb5207264a2487749c1fbd5334e43 339 PANTHER PTHR33055 2 334 4.5E-137 T 22-04-2016 YE1070 6e55a7b78ef57668567a560005d80376 398 Pfam PF04055 Radical SAM superfamily 134 303 3.9E-17 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 YE1070 6e55a7b78ef57668567a560005d80376 398 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 31 378 74.908 T 22-04-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YE1070 6e55a7b78ef57668567a560005d80376 398 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 29 383 3.2E-170 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YE1070 6e55a7b78ef57668567a560005d80376 398 Gene3D G3DSA:3.20.20.70 131 336 4.1E-17 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YE1070 6e55a7b78ef57668567a560005d80376 398 PIRSF PIRSF006004 24 391 1.2E-146 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YE1070 6e55a7b78ef57668567a560005d80376 398 PANTHER PTHR30544:SF5 1 398 4.6E-214 T 22-04-2016 YE1070 6e55a7b78ef57668567a560005d80376 398 SUPERFAMILY SSF102114 130 348 1.27E-14 T 22-04-2016 YE1070 6e55a7b78ef57668567a560005d80376 398 PANTHER PTHR30544 1 398 4.6E-214 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 YE2274 6f3d878fdfc1f936d913c098359ae4ca 349 SUPERFAMILY SSF103481 192 288 3.79E-6 T 22-04-2016 YE2274 6f3d878fdfc1f936d913c098359ae4ca 349 Pfam PF00892 EamA-like transporter family 155 284 7.6E-7 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YE2274 6f3d878fdfc1f936d913c098359ae4ca 349 Pfam PF00892 EamA-like transporter family 10 144 2.4E-19 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YE2274 6f3d878fdfc1f936d913c098359ae4ca 349 SUPERFAMILY SSF103481 55 148 1.96E-12 T 22-04-2016 YE3813 091a9dc4280bbb78cc25d3059fae9c72 80 ProDom PD745092 MEMBRANE YHDT SODIUM/PANTOTHENATE TRANSMEMBRANE INNER SYMPORTER Y0210 INTEGRAL PROTEIN-LIKE PM1090 1 79 6.0E-36 T 22-04-2016 IPR010398 Protein of unknown function DUF997 YE3813 091a9dc4280bbb78cc25d3059fae9c72 80 PANTHER PTHR39174:SF1 1 80 2.0E-38 T 22-04-2016 YE3813 091a9dc4280bbb78cc25d3059fae9c72 80 Pfam PF06196 Protein of unknown function (DUF997) 7 77 4.5E-31 T 22-04-2016 IPR010398 Protein of unknown function DUF997 YE3813 091a9dc4280bbb78cc25d3059fae9c72 80 PANTHER PTHR39174 1 80 2.0E-38 T 22-04-2016 YE0319 741b96e22c4e4ed10456ce6caaeebeb5 568 Pfam PF06472 ABC transporter transmembrane region 2 3 290 4.2E-47 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YE0319 741b96e22c4e4ed10456ce6caaeebeb5 568 Gene3D G3DSA:3.40.50.300 371 553 4.3E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0319 741b96e22c4e4ed10456ce6caaeebeb5 568 Gene3D G3DSA:1.20.1560.10 24 350 1.9E-10 T 22-04-2016 YE0319 741b96e22c4e4ed10456ce6caaeebeb5 568 SUPERFAMILY SSF90123 23 347 1.83E-19 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YE0319 741b96e22c4e4ed10456ce6caaeebeb5 568 SMART SM00382 385 555 6.7E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain YE0319 741b96e22c4e4ed10456ce6caaeebeb5 568 PANTHER PTHR11384 1 526 3.3E-136 T 22-04-2016 YE0319 741b96e22c4e4ed10456ce6caaeebeb5 568 Pfam PF00005 ABC transporter 376 509 6.6E-22 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE0319 741b96e22c4e4ed10456ce6caaeebeb5 568 PANTHER PTHR11384:SF3 1 526 3.3E-136 T 22-04-2016 YE0319 741b96e22c4e4ed10456ce6caaeebeb5 568 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE0319 741b96e22c4e4ed10456ce6caaeebeb5 568 SUPERFAMILY SSF52540 368 560 4.8E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2864 74cf235bd9a06583105500684748b9ed 384 PANTHER PTHR30177 89 384 6.2E-171 T 22-04-2016 YE2864 74cf235bd9a06583105500684748b9ed 384 PANTHER PTHR30177:SF8 89 384 6.2E-171 T 22-04-2016 YE2864 74cf235bd9a06583105500684748b9ed 384 Gene3D G3DSA:1.10.3720.10 40 77 1.2E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE2864 74cf235bd9a06583105500684748b9ed 384 Gene3D G3DSA:1.10.3720.10 135 367 1.2E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE2864 74cf235bd9a06583105500684748b9ed 384 SUPERFAMILY SSF161098 172 371 4.45E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE2864 74cf235bd9a06583105500684748b9ed 384 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 195 375 1.1E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE0340 1735f2d0612aa0ade35898c5ce090a41 103 SUPERFAMILY SSF54909 10 101 2.06E-20 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel YE0340 1735f2d0612aa0ade35898c5ce090a41 103 PANTHER PTHR33336 10 89 2.1E-16 T 22-04-2016 YE0340 1735f2d0612aa0ade35898c5ce090a41 103 Gene3D G3DSA:3.30.70.900 8 101 7.3E-23 T 22-04-2016 YE0340 1735f2d0612aa0ade35898c5ce090a41 103 Pfam PF03992 Antibiotic biosynthesis monooxygenase 11 81 1.5E-13 T 22-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain YE3402 9e81d8b0fc5b2f173cf79b5e332e6d40 297 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 1 296 57.822 T 22-04-2016 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria YE3402 9e81d8b0fc5b2f173cf79b5e332e6d40 297 PANTHER PTHR30579 1 296 1.7E-161 T 22-04-2016 YE3402 9e81d8b0fc5b2f173cf79b5e332e6d40 297 PANTHER PTHR30579:SF2 1 296 1.7E-161 T 22-04-2016 YE3402 9e81d8b0fc5b2f173cf79b5e332e6d40 297 SUPERFAMILY SSF46785 4 110 5.75E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3402 9e81d8b0fc5b2f173cf79b5e332e6d40 297 Gene3D G3DSA:1.10.10.10 1 73 4.6E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3402 9e81d8b0fc5b2f173cf79b5e332e6d40 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 8.9E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE3402 9e81d8b0fc5b2f173cf79b5e332e6d40 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 8.9E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE3402 9e81d8b0fc5b2f173cf79b5e332e6d40 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 8.9E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE3402 9e81d8b0fc5b2f173cf79b5e332e6d40 297 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 5 293 6.9E-111 T 22-04-2016 IPR017685 HTH-type transcriptional regulator ArgP YE3402 9e81d8b0fc5b2f173cf79b5e332e6d40 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 5.7E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE3402 9e81d8b0fc5b2f173cf79b5e332e6d40 297 Pfam PF03466 LysR substrate binding domain 93 287 1.4E-12 T 22-04-2016 IPR005119 LysR, substrate-binding YE3402 9e81d8b0fc5b2f173cf79b5e332e6d40 297 SUPERFAMILY SSF53850 92 290 3.62E-19 T 22-04-2016 YE3402 9e81d8b0fc5b2f173cf79b5e332e6d40 297 Gene3D G3DSA:3.40.190.10 92 196 3.1E-40 T 22-04-2016 YE3859 f21de0c8fec996acf084035b14038ae4 168 Gene3D G3DSA:3.40.1410.10 11 166 9.3E-58 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain YE3859 f21de0c8fec996acf084035b14038ae4 168 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 12 166 26.316 T 22-04-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 YE3859 f21de0c8fec996acf084035b14038ae4 168 Pfam PF04345 Chorismate lyase 22 167 6.4E-32 T 22-04-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 YE3859 f21de0c8fec996acf084035b14038ae4 168 PANTHER PTHR38683 1 167 2.0E-66 T 22-04-2016 YE3859 f21de0c8fec996acf084035b14038ae4 168 SUPERFAMILY SSF64288 9 166 8.57E-52 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain YE1558 4aa442469db772e8b4421601ac30de3a 182 Gene3D G3DSA:3.30.1380.10 66 182 5.5E-30 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain YE1558 4aa442469db772e8b4421601ac30de3a 182 SUPERFAMILY SSF55166 66 182 1.94E-32 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain YE1558 4aa442469db772e8b4421601ac30de3a 182 PANTHER PTHR37425 1 182 5.0E-77 T 22-04-2016 YE1558 4aa442469db772e8b4421601ac30de3a 182 Pfam PF05951 Bacterial protein of unknown function (DUF882) 34 182 6.3E-61 T 22-04-2016 IPR010275 Protein of unknown function DUF882 YE1246 12ed8dc1f819d0a4fbca7634e5753dc2 497 Gene3D G3DSA:1.20.1250.20 4 189 3.9E-27 T 22-04-2016 YE1246 12ed8dc1f819d0a4fbca7634e5753dc2 497 Pfam PF07690 Major Facilitator Superfamily 12 403 9.3E-39 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YE1246 12ed8dc1f819d0a4fbca7634e5753dc2 497 PANTHER PTHR23501 3 488 2.3E-168 T 22-04-2016 YE1246 12ed8dc1f819d0a4fbca7634e5753dc2 497 PRINTS PR01036 Tetracycline resistance protein TetB signature 394 413 1.3E-7 T 22-04-2016 YE1246 12ed8dc1f819d0a4fbca7634e5753dc2 497 PRINTS PR01036 Tetracycline resistance protein TetB signature 157 181 1.3E-7 T 22-04-2016 YE1246 12ed8dc1f819d0a4fbca7634e5753dc2 497 PRINTS PR01036 Tetracycline resistance protein TetB signature 132 156 1.3E-7 T 22-04-2016 YE1246 12ed8dc1f819d0a4fbca7634e5753dc2 497 PRINTS PR01036 Tetracycline resistance protein TetB signature 70 92 1.3E-7 T 22-04-2016 YE1246 12ed8dc1f819d0a4fbca7634e5753dc2 497 PANTHER PTHR23501:SF65 3 488 2.3E-168 T 22-04-2016 YE1246 12ed8dc1f819d0a4fbca7634e5753dc2 497 Gene3D G3DSA:1.20.1250.20 260 414 1.5E-17 T 22-04-2016 YE1246 12ed8dc1f819d0a4fbca7634e5753dc2 497 Gene3D G3DSA:1.20.1250.20 464 491 1.5E-17 T 22-04-2016 YE1246 12ed8dc1f819d0a4fbca7634e5753dc2 497 SUPERFAMILY SSF103473 3 205 1.57E-56 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE1246 12ed8dc1f819d0a4fbca7634e5753dc2 497 SUPERFAMILY SSF103473 463 491 1.57E-56 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE1246 12ed8dc1f819d0a4fbca7634e5753dc2 497 SUPERFAMILY SSF103473 242 413 1.57E-56 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE4015 8f32de368102b137fc23ade04877a43a 298 PANTHER PTHR30346 1 292 7.9E-101 T 22-04-2016 YE4015 8f32de368102b137fc23ade04877a43a 298 Gene3D G3DSA:3.40.190.10 177 264 2.0E-31 T 22-04-2016 YE4015 8f32de368102b137fc23ade04877a43a 298 SUPERFAMILY SSF53850 88 292 2.64E-33 T 22-04-2016 YE4015 8f32de368102b137fc23ade04877a43a 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.1E-22 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE4015 8f32de368102b137fc23ade04877a43a 298 PANTHER PTHR30346:SF6 1 292 7.9E-101 T 22-04-2016 YE4015 8f32de368102b137fc23ade04877a43a 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.0E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE4015 8f32de368102b137fc23ade04877a43a 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.0E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE4015 8f32de368102b137fc23ade04877a43a 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.0E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE4015 8f32de368102b137fc23ade04877a43a 298 SUPERFAMILY SSF46785 1 85 4.31E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE4015 8f32de368102b137fc23ade04877a43a 298 Pfam PF03466 LysR substrate binding domain 87 292 9.2E-38 T 22-04-2016 IPR005119 LysR, substrate-binding YE4015 8f32de368102b137fc23ade04877a43a 298 Gene3D G3DSA:1.10.10.10 1 85 5.6E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE4015 8f32de368102b137fc23ade04877a43a 298 Gene3D G3DSA:3.40.190.10 88 176 1.1E-19 T 22-04-2016 YE1867 146d612d260e75dc71cd5a3fc5577272 242 SUPERFAMILY SSF48657 5 119 2.09E-39 T 22-04-2016 IPR016103 ProQ/FinO domain YE1867 146d612d260e75dc71cd5a3fc5577272 242 PANTHER PTHR38106:SF1 1 242 3.0E-92 T 22-04-2016 YE1867 146d612d260e75dc71cd5a3fc5577272 242 SMART SM00945 5 119 5.0E-61 T 22-04-2016 IPR016103 ProQ/FinO domain YE1867 146d612d260e75dc71cd5a3fc5577272 242 Pfam PF04352 ProQ/FINO family 8 115 1.3E-42 T 22-04-2016 IPR016103 ProQ/FinO domain YE1867 146d612d260e75dc71cd5a3fc5577272 242 PANTHER PTHR38106 1 242 3.0E-92 T 22-04-2016 YE1867 146d612d260e75dc71cd5a3fc5577272 242 Gene3D G3DSA:1.10.1710.10 4 118 5.9E-35 T 22-04-2016 IPR016103 ProQ/FinO domain YE1867 146d612d260e75dc71cd5a3fc5577272 242 Hamap MF_00749 RNA chaperone ProQ [proQ]. 3 242 30.937 T 22-04-2016 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 YE2816 57acb4ecf1598061f95cf2d529ce79fc 345 ProSitePatterns PS00356 LacI-type HTH domain signature. 13 31 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE2816 57acb4ecf1598061f95cf2d529ce79fc 345 Pfam PF00356 Bacterial regulatory proteins, lacI family 12 57 1.0E-19 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE2816 57acb4ecf1598061f95cf2d529ce79fc 345 Gene3D G3DSA:3.40.50.2300 176 339 5.9E-49 T 22-04-2016 YE2816 57acb4ecf1598061f95cf2d529ce79fc 345 SUPERFAMILY SSF47413 10 68 8.94E-19 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE2816 57acb4ecf1598061f95cf2d529ce79fc 345 Pfam PF13377 Periplasmic binding protein-like domain 179 338 9.8E-34 T 22-04-2016 YE2816 57acb4ecf1598061f95cf2d529ce79fc 345 SMART SM00354 10 80 4.3E-31 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE2816 57acb4ecf1598061f95cf2d529ce79fc 345 PANTHER PTHR30146 10 339 4.6E-177 T 22-04-2016 YE2816 57acb4ecf1598061f95cf2d529ce79fc 345 Gene3D G3DSA:1.10.260.40 11 66 4.4E-26 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE2816 57acb4ecf1598061f95cf2d529ce79fc 345 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 12 22 3.7E-6 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE2816 57acb4ecf1598061f95cf2d529ce79fc 345 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 22 32 3.7E-6 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 YE2816 57acb4ecf1598061f95cf2d529ce79fc 345 SUPERFAMILY SSF53822 70 339 3.62E-79 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YE2816 57acb4ecf1598061f95cf2d529ce79fc 345 Gene3D G3DSA:3.40.50.2300 67 175 3.2E-46 T 22-04-2016 YE2816 57acb4ecf1598061f95cf2d529ce79fc 345 PANTHER PTHR30146:SF55 10 339 4.6E-177 T 22-04-2016 YE0154 c370c378f38f202b72a513716ebe3482 293 Pfam PF03466 LysR substrate binding domain 89 293 3.9E-39 T 22-04-2016 IPR005119 LysR, substrate-binding YE0154 c370c378f38f202b72a513716ebe3482 293 Gene3D G3DSA:1.10.10.10 1 84 2.6E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0154 c370c378f38f202b72a513716ebe3482 293 Gene3D G3DSA:3.40.190.10 176 252 1.2E-12 T 22-04-2016 YE0154 c370c378f38f202b72a513716ebe3482 293 Gene3D G3DSA:3.40.190.10 90 175 6.5E-16 T 22-04-2016 YE0154 c370c378f38f202b72a513716ebe3482 293 SUPERFAMILY SSF46785 1 111 4.3E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0154 c370c378f38f202b72a513716ebe3482 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.1E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE0154 c370c378f38f202b72a513716ebe3482 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.1E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE0154 c370c378f38f202b72a513716ebe3482 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.1E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE0154 c370c378f38f202b72a513716ebe3482 293 PANTHER PTHR30126 1 293 2.0E-191 T 22-04-2016 YE0154 c370c378f38f202b72a513716ebe3482 293 PANTHER PTHR30126:SF14 1 293 2.0E-191 T 22-04-2016 YE0154 c370c378f38f202b72a513716ebe3482 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 5.4E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE0154 c370c378f38f202b72a513716ebe3482 293 SUPERFAMILY SSF53850 89 293 6.15E-34 T 22-04-2016 YE4126 7e85ac8b7689907104879f19ca047930 330 Hamap MF_01949 O-acetyltransferase WecH [wecH]. 1 330 40.05 T 22-04-2016 IPR032905 O-acetyltransferase WecH GO:0009246|GO:0016413 UniPathway: UPA00566 YE4126 7e85ac8b7689907104879f19ca047930 330 Pfam PF01757 Acyltransferase family 6 317 1.2E-30 T 22-04-2016 IPR002656 Acyltransferase 3 GO:0016747 YE2642 8ce5658005b263f62c8c884152b640c4 249 Gene3D G3DSA:3.90.470.20 134 218 1.8E-6 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 YE2642 8ce5658005b263f62c8c884152b640c4 249 PANTHER PTHR38096 1 249 1.1E-69 T 22-04-2016 YE2642 8ce5658005b263f62c8c884152b640c4 249 PRINTS PR01399 Enterobactin synthetase component D signature 60 80 5.6E-9 T 22-04-2016 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 UniPathway: UPA00017 YE2642 8ce5658005b263f62c8c884152b640c4 249 PRINTS PR01399 Enterobactin synthetase component D signature 90 108 5.6E-9 T 22-04-2016 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 UniPathway: UPA00017 YE2642 8ce5658005b263f62c8c884152b640c4 249 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 134 220 5.3E-11 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 YE2642 8ce5658005b263f62c8c884152b640c4 249 SUPERFAMILY SSF56214 133 217 4.36E-14 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 YE0527 9ac381b860ee9278d79d6a789b33d1db 329 Pfam PF02653 Branched-chain amino acid transport system / permease component 14 276 3.9E-44 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YE0527 9ac381b860ee9278d79d6a789b33d1db 329 PANTHER PTHR32196 1 300 3.9E-169 T 22-04-2016 YE0527 9ac381b860ee9278d79d6a789b33d1db 329 PANTHER PTHR32196:SF29 1 300 3.9E-169 T 22-04-2016 YE0704 0c9e8218dcdb8b74e75f585f6cfba61e 749 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 59 749 1.5E-108 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 YE0704 0c9e8218dcdb8b74e75f585f6cfba61e 749 Gene3D G3DSA:2.40.170.20 176 749 1.8E-118 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YE0704 0c9e8218dcdb8b74e75f585f6cfba61e 749 Gene3D G3DSA:2.170.130.10 59 175 8.3E-37 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YE0704 0c9e8218dcdb8b74e75f585f6cfba61e 749 PANTHER PTHR30069:SF5 344 633 0.0 T 22-04-2016 YE0704 0c9e8218dcdb8b74e75f585f6cfba61e 749 Pfam PF07715 TonB-dependent Receptor Plug Domain 59 172 1.1E-27 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YE0704 0c9e8218dcdb8b74e75f585f6cfba61e 749 PANTHER PTHR30069 35 288 0.0 T 22-04-2016 YE0704 0c9e8218dcdb8b74e75f585f6cfba61e 749 Pfam PF00593 TonB dependent receptor 470 747 1.3E-30 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YE0704 0c9e8218dcdb8b74e75f585f6cfba61e 749 PANTHER PTHR30069 344 633 0.0 T 22-04-2016 YE0704 0c9e8218dcdb8b74e75f585f6cfba61e 749 SUPERFAMILY SSF56935 43 749 4.4E-129 T 22-04-2016 YE0704 0c9e8218dcdb8b74e75f585f6cfba61e 749 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 732 749 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site YE0704 0c9e8218dcdb8b74e75f585f6cfba61e 749 PANTHER PTHR30069:SF5 35 288 0.0 T 22-04-2016 YE2657 630d3dff5a76fff7d48b3a654043bccf 525 Gene3D G3DSA:3.30.565.10 397 506 4.1E-11 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE2657 630d3dff5a76fff7d48b3a654043bccf 525 PANTHER PTHR24421:SF1 185 521 5.2E-52 T 22-04-2016 YE2657 630d3dff5a76fff7d48b3a654043bccf 525 PANTHER PTHR24421 185 521 5.2E-52 T 22-04-2016 YE2657 630d3dff5a76fff7d48b3a654043bccf 525 SMART SM00387 418 508 6.3E-7 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE2657 630d3dff5a76fff7d48b3a654043bccf 525 Pfam PF07730 Histidine kinase 315 379 4.1E-14 T 22-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 YE2657 630d3dff5a76fff7d48b3a654043bccf 525 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 423 506 1.5E-7 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE2657 630d3dff5a76fff7d48b3a654043bccf 525 Pfam PF05231 MASE1 9 280 1.4E-34 T 22-04-2016 IPR007895 MASE1 YE2657 630d3dff5a76fff7d48b3a654043bccf 525 PRINTS PR00344 Bacterial sensor protein C-terminal signature 454 468 3.7E-5 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE2657 630d3dff5a76fff7d48b3a654043bccf 525 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 488 3.7E-5 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 YE2657 630d3dff5a76fff7d48b3a654043bccf 525 SUPERFAMILY SSF55874 388 505 3.67E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain YE1285 45bad50ca7a8754bf844495ddd9419ba 91 Gene3D G3DSA:1.10.357.10 10 86 5.5E-4 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 YE1285 45bad50ca7a8754bf844495ddd9419ba 91 Pfam PF08891 YfcL protein 4 86 2.3E-35 T 22-04-2016 IPR014987 Uncharacterised protein family YfcL YE1031 b5b25ddb30b488fbeded4edeace4e4d8 486 Gene3D G3DSA:1.10.530.10 287 460 4.5E-39 T 22-04-2016 YE1031 b5b25ddb30b488fbeded4edeace4e4d8 486 PANTHER PTHR21666 273 485 6.1E-141 T 22-04-2016 YE1031 b5b25ddb30b488fbeded4edeace4e4d8 486 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 309 337 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 YE1031 b5b25ddb30b488fbeded4edeace4e4d8 486 Gene3D G3DSA:3.40.190.10 227 266 5.0E-16 T 22-04-2016 YE1031 b5b25ddb30b488fbeded4edeace4e4d8 486 Gene3D G3DSA:3.40.190.10 41 120 5.0E-16 T 22-04-2016 YE1031 b5b25ddb30b488fbeded4edeace4e4d8 486 Gene3D G3DSA:3.40.190.10 121 226 7.9E-7 T 22-04-2016 YE1031 b5b25ddb30b488fbeded4edeace4e4d8 486 SUPERFAMILY SSF53955 432 445 6.26E-36 T 22-04-2016 IPR023346 Lysozyme-like domain YE1031 b5b25ddb30b488fbeded4edeace4e4d8 486 SUPERFAMILY SSF53955 254 397 6.26E-36 T 22-04-2016 IPR023346 Lysozyme-like domain YE1031 b5b25ddb30b488fbeded4edeace4e4d8 486 PANTHER PTHR21666:SF215 273 485 6.1E-141 T 22-04-2016 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 YE1031 b5b25ddb30b488fbeded4edeace4e4d8 486 SMART SM00062 44 268 3.1E-36 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YE1031 b5b25ddb30b488fbeded4edeace4e4d8 486 Pfam PF01464 Transglycosylase SLT domain 297 402 4.0E-24 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 YE1031 b5b25ddb30b488fbeded4edeace4e4d8 486 SUPERFAMILY SSF53850 40 267 9.19E-39 T 22-04-2016 YE1031 b5b25ddb30b488fbeded4edeace4e4d8 486 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 5 475 49.615 T 22-04-2016 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 YE1031 b5b25ddb30b488fbeded4edeace4e4d8 486 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 51 267 1.5E-32 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YE3722 5e29e2a10e83b0e44885a79bbb0ef425 351 Pfam PF00107 Zinc-binding dehydrogenase 187 310 9.2E-21 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 YE3722 5e29e2a10e83b0e44885a79bbb0ef425 351 PANTHER PTHR11695:SF582 17 348 4.1E-162 T 22-04-2016 YE3722 5e29e2a10e83b0e44885a79bbb0ef425 351 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 63 77 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 YE3722 5e29e2a10e83b0e44885a79bbb0ef425 351 Gene3D G3DSA:3.40.50.720 182 293 3.5E-22 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3722 5e29e2a10e83b0e44885a79bbb0ef425 351 SUPERFAMILY SSF50129 16 175 3.04E-52 T 22-04-2016 IPR011032 GroES-like YE3722 5e29e2a10e83b0e44885a79bbb0ef425 351 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 180 207 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YE3722 5e29e2a10e83b0e44885a79bbb0ef425 351 Gene3D G3DSA:3.90.180.10 2 181 6.2E-63 T 22-04-2016 IPR011032 GroES-like YE3722 5e29e2a10e83b0e44885a79bbb0ef425 351 SMART SM00829 10 344 6.4E-4 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 YE3722 5e29e2a10e83b0e44885a79bbb0ef425 351 PANTHER PTHR11695 17 348 4.1E-162 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 YE3722 5e29e2a10e83b0e44885a79bbb0ef425 351 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 145 2.7E-25 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 YE3722 5e29e2a10e83b0e44885a79bbb0ef425 351 SUPERFAMILY SSF51735 150 314 4.64E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3628 535c674f788f4db6b2bb4b6661142752 432 Pfam PF02321 Outer membrane efflux protein 43 228 2.1E-10 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 YE3628 535c674f788f4db6b2bb4b6661142752 432 Pfam PF02321 Outer membrane efflux protein 251 426 2.4E-19 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 YE3628 535c674f788f4db6b2bb4b6661142752 432 Gene3D G3DSA:1.20.1600.10 36 426 2.9E-32 T 22-04-2016 YE3628 535c674f788f4db6b2bb4b6661142752 432 SUPERFAMILY SSF56954 19 426 2.75E-50 T 22-04-2016 YE0461 b751bd2e54885eb3d30c9455312cbf80 294 PANTHER PTHR30193:SF6 7 294 4.8E-116 T 22-04-2016 YE0461 b751bd2e54885eb3d30c9455312cbf80 294 Gene3D G3DSA:1.10.3720.10 64 285 2.7E-59 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE0461 b751bd2e54885eb3d30c9455312cbf80 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 291 8.8E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE0461 b751bd2e54885eb3d30c9455312cbf80 294 PANTHER PTHR30193 7 294 4.8E-116 T 22-04-2016 YE0461 b751bd2e54885eb3d30c9455312cbf80 294 SUPERFAMILY SSF161098 55 282 3.27E-58 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE0826 3075fe1f70f99adcbb87d0e93b6e96ae 314 Gene3D G3DSA:1.10.10.10 14 52 4.7E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0826 3075fe1f70f99adcbb87d0e93b6e96ae 314 PANTHER PTHR34294 6 314 4.5E-74 T 22-04-2016 YE0826 3075fe1f70f99adcbb87d0e93b6e96ae 314 Pfam PF04198 Putative sugar-binding domain 65 314 5.7E-62 T 22-04-2016 IPR007324 Sugar-binding domain, putative GO:0030246 YE0826 3075fe1f70f99adcbb87d0e93b6e96ae 314 Gene3D G3DSA:3.40.50.1360 55 314 1.0E-74 T 22-04-2016 YE0826 3075fe1f70f99adcbb87d0e93b6e96ae 314 SUPERFAMILY SSF100950 64 314 8.37E-66 T 22-04-2016 YE0826 3075fe1f70f99adcbb87d0e93b6e96ae 314 Pfam PF01047 MarR family 14 51 9.5E-6 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 YE1417 3eafc1ccb6ebf7fbe22ba1ca9c5354c3 478 PANTHER PTHR10353:SF35 5 478 7.6E-236 T 22-04-2016 YE1417 3eafc1ccb6ebf7fbe22ba1ca9c5354c3 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 393 404 1.0E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YE1417 3eafc1ccb6ebf7fbe22ba1ca9c5354c3 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 415 432 1.0E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YE1417 3eafc1ccb6ebf7fbe22ba1ca9c5354c3 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 440 452 1.0E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YE1417 3eafc1ccb6ebf7fbe22ba1ca9c5354c3 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 372 380 1.0E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YE1417 3eafc1ccb6ebf7fbe22ba1ca9c5354c3 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 306 320 1.0E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YE1417 3eafc1ccb6ebf7fbe22ba1ca9c5354c3 478 Gene3D G3DSA:3.20.20.80 5 476 3.1E-149 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 YE1417 3eafc1ccb6ebf7fbe22ba1ca9c5354c3 478 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 372 380 - T 22-04-2016 IPR018120 Glycoside hydrolase family 1, active site YE1417 3eafc1ccb6ebf7fbe22ba1ca9c5354c3 478 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 10 24 - T 22-04-2016 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site YE1417 3eafc1ccb6ebf7fbe22ba1ca9c5354c3 478 PANTHER PTHR10353 5 478 7.6E-236 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YE1417 3eafc1ccb6ebf7fbe22ba1ca9c5354c3 478 SUPERFAMILY SSF51445 2 471 4.7E-161 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YE1417 3eafc1ccb6ebf7fbe22ba1ca9c5354c3 478 Pfam PF00232 Glycosyl hydrolase family 1 3 475 9.5E-130 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YE0226 e2920b04b1327f740abc8394330bf65c 222 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 6.7E-94 T 22-04-2016 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 YE0226 e2920b04b1327f740abc8394330bf65c 222 SMART SM00382 27 214 3.0E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain YE0226 e2920b04b1327f740abc8394330bf65c 222 Gene3D G3DSA:3.40.50.300 1 215 8.6E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0226 e2920b04b1327f740abc8394330bf65c 222 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE0226 e2920b04b1327f740abc8394330bf65c 222 PANTHER PTHR24220 3 215 6.8E-126 T 22-04-2016 YE0226 e2920b04b1327f740abc8394330bf65c 222 Pfam PF00005 ABC transporter 18 165 8.2E-36 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE0226 e2920b04b1327f740abc8394330bf65c 222 SUPERFAMILY SSF52540 1 216 2.18E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0226 e2920b04b1327f740abc8394330bf65c 222 PANTHER PTHR24220:SF470 3 215 6.8E-126 T 22-04-2016 YE2903 8da97e2398e8ac6ccfdb0f00ebfc06fb 235 SMART SM00382 26 217 7.7E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain YE2903 8da97e2398e8ac6ccfdb0f00ebfc06fb 235 PANTHER PTHR24220 3 231 5.0E-116 T 22-04-2016 YE2903 8da97e2398e8ac6ccfdb0f00ebfc06fb 235 PANTHER PTHR24220:SF404 3 231 5.0E-116 T 22-04-2016 YE2903 8da97e2398e8ac6ccfdb0f00ebfc06fb 235 Gene3D G3DSA:3.40.50.300 1 227 6.2E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2903 8da97e2398e8ac6ccfdb0f00ebfc06fb 235 Pfam PF00005 ABC transporter 19 164 8.1E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE2903 8da97e2398e8ac6ccfdb0f00ebfc06fb 235 SUPERFAMILY SSF52540 2 227 6.32E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3573 91f8948b4df884675627cb1517176bb0 164 SUPERFAMILY SSF103054 83 158 1.1E-12 T 22-04-2016 IPR023229 Type II secretion system protein M, periplasmic domain YE3573 91f8948b4df884675627cb1517176bb0 164 Gene3D G3DSA:3.30.1360.100 84 160 7.4E-14 T 22-04-2016 IPR023229 Type II secretion system protein M, periplasmic domain YE3573 91f8948b4df884675627cb1517176bb0 164 Pfam PF04612 Type II secretion system (T2SS), protein M 2 152 2.7E-24 T 22-04-2016 IPR007690 Type II secretion system, protein M GO:0006858 YE1209 72847239f291a9d57aaad4925a7b2afe 223 PANTHER PTHR37468 1 221 4.9E-95 T 22-04-2016 YE1209 72847239f291a9d57aaad4925a7b2afe 223 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 1 200 4.1E-39 T 22-04-2016 YE1209 72847239f291a9d57aaad4925a7b2afe 223 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 1 218 25.158 T 22-04-2016 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 YE1289 3ce8311e6166b6508165862f47296b03 232 Gene3D G3DSA:3.40.50.1860 2 113 1.5E-43 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YE1289 3ce8311e6166b6508165862f47296b03 232 Pfam PF01177 Asp/Glu/Hydantoin racemase 8 225 1.9E-56 T 22-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YE1289 3ce8311e6166b6508165862f47296b03 232 PANTHER PTHR21198 1 229 1.1E-91 T 22-04-2016 YE1289 3ce8311e6166b6508165862f47296b03 232 SUPERFAMILY SSF53681 119 230 1.54E-32 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YE1289 3ce8311e6166b6508165862f47296b03 232 Gene3D G3DSA:3.40.50.1860 114 217 2.7E-36 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YE1289 3ce8311e6166b6508165862f47296b03 232 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 231 1.3E-71 T 22-04-2016 IPR004380 Aspartate racemase GO:0006520|GO:0016855 YE1289 3ce8311e6166b6508165862f47296b03 232 SUPERFAMILY SSF53681 2 117 6.21E-36 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 YE1289 3ce8311e6166b6508165862f47296b03 232 PANTHER PTHR21198:SF7 1 229 1.1E-91 T 22-04-2016 YE0646 3bb08e10125ec2e62cf0291539fa06d8 810 Gene3D G3DSA:3.20.70.20 9 809 7.1E-260 T 22-04-2016 YE0646 3bb08e10125ec2e62cf0291539fa06d8 810 SUPERFAMILY SSF51998 7 809 4.88E-224 T 22-04-2016 YE0646 3bb08e10125ec2e62cf0291539fa06d8 810 TIGRFAM TIGR01774 PFL2-3: glycyl radical enzyme, PFL2/glycerol dehydratase family 8 810 0.0 T 22-04-2016 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 YE0646 3bb08e10125ec2e62cf0291539fa06d8 810 PANTHER PTHR30191 6 810 0.0 T 22-04-2016 YE0646 3bb08e10125ec2e62cf0291539fa06d8 810 PANTHER PTHR30191:SF6 6 810 0.0 T 22-04-2016 YE0646 3bb08e10125ec2e62cf0291539fa06d8 810 Pfam PF01228 Glycine radical 688 791 2.0E-28 T 22-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 YE0646 3bb08e10125ec2e62cf0291539fa06d8 810 Pfam PF02901 Pyruvate formate lyase-like 10 671 1.9E-210 T 22-04-2016 IPR004184 Pyruvate formate lyase domain GO:0003824 YE0646 3bb08e10125ec2e62cf0291539fa06d8 810 ProSitePatterns PS00850 Glycine radical domain signature. 781 789 - T 22-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site YE3378 b3a9520eee190339f383c7262d0a4d95 577 Pfam PF02272 DHHA1 domain 382 449 4.8E-15 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 YE3378 b3a9520eee190339f383c7262d0a4d95 577 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 23 573 1.2E-161 T 22-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 YE3378 b3a9520eee190339f383c7262d0a4d95 577 PANTHER PTHR30255:SF2 4 576 1.5E-228 T 22-04-2016 YE3378 b3a9520eee190339f383c7262d0a4d95 577 Pfam PF01368 DHH family 74 200 1.5E-10 T 22-04-2016 IPR001667 DDH domain YE3378 b3a9520eee190339f383c7262d0a4d95 577 SUPERFAMILY SSF64182 49 466 2.75E-116 T 22-04-2016 YE3378 b3a9520eee190339f383c7262d0a4d95 577 PANTHER PTHR30255 4 576 1.5E-228 T 22-04-2016 YE0949 4ec6971ae6c8dfe9257de3b765bd20a9 268 SMART SM00382 35 223 4.4E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain YE0949 4ec6971ae6c8dfe9257de3b765bd20a9 268 PANTHER PTHR24220 12 257 4.6E-161 T 22-04-2016 YE0949 4ec6971ae6c8dfe9257de3b765bd20a9 268 PANTHER PTHR24220:SF505 12 257 4.6E-161 T 22-04-2016 YE0949 4ec6971ae6c8dfe9257de3b765bd20a9 268 SUPERFAMILY SSF52540 23 237 3.69E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0949 4ec6971ae6c8dfe9257de3b765bd20a9 268 Pfam PF00005 ABC transporter 26 175 2.0E-19 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE0949 4ec6971ae6c8dfe9257de3b765bd20a9 268 Gene3D G3DSA:3.40.50.300 23 245 5.0E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1673 53f7fcc4e37cb3f95ae618bbc5d22540 67 Pfam PF05489 Phage Tail Protein X 1 56 5.2E-27 T 22-04-2016 IPR008861 Phage Tail Protein X-like YE3432 cf0f2fddac3d21e796b7f4684fabe86c 350 PANTHER PTHR30486 11 350 5.0E-156 T 22-04-2016 YE3432 cf0f2fddac3d21e796b7f4684fabe86c 350 Pfam PF00437 Type II/IV secretion system protein 25 278 2.7E-43 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 YE3432 cf0f2fddac3d21e796b7f4684fabe86c 350 PANTHER PTHR30486:SF6 11 350 5.0E-156 T 22-04-2016 YE3432 cf0f2fddac3d21e796b7f4684fabe86c 350 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 19 345 5.7E-126 T 22-04-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 YE3432 cf0f2fddac3d21e796b7f4684fabe86c 350 SUPERFAMILY SSF52540 10 344 4.62E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3432 cf0f2fddac3d21e796b7f4684fabe86c 350 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 207 221 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 YE3432 cf0f2fddac3d21e796b7f4684fabe86c 350 Gene3D G3DSA:3.40.50.300 118 348 4.2E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2132 6765b87f7bde345ece2596af9bf26f2c 294 SUPERFAMILY SSF46785 1 87 5.06E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2132 6765b87f7bde345ece2596af9bf26f2c 294 SUPERFAMILY SSF53850 88 293 3.62E-27 T 22-04-2016 YE2132 6765b87f7bde345ece2596af9bf26f2c 294 PANTHER PTHR30419 1 294 5.2E-59 T 22-04-2016 YE2132 6765b87f7bde345ece2596af9bf26f2c 294 PANTHER PTHR30419:SF4 1 294 5.2E-59 T 22-04-2016 YE2132 6765b87f7bde345ece2596af9bf26f2c 294 Gene3D G3DSA:3.40.190.10 188 268 2.1E-8 T 22-04-2016 YE2132 6765b87f7bde345ece2596af9bf26f2c 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 9.8E-14 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE2132 6765b87f7bde345ece2596af9bf26f2c 294 Pfam PF03466 LysR substrate binding domain 87 294 2.1E-29 T 22-04-2016 IPR005119 LysR, substrate-binding YE2132 6765b87f7bde345ece2596af9bf26f2c 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.1E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE2132 6765b87f7bde345ece2596af9bf26f2c 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.1E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE2132 6765b87f7bde345ece2596af9bf26f2c 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.1E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE2132 6765b87f7bde345ece2596af9bf26f2c 294 Gene3D G3DSA:1.10.10.10 1 85 2.8E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2132 6765b87f7bde345ece2596af9bf26f2c 294 Gene3D G3DSA:3.40.190.10 88 187 8.9E-11 T 22-04-2016 YE0246 2de6d622af2922166c7051feefff436a 319 Pfam PF03547 Membrane transport protein 168 310 2.5E-15 T 22-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 YE0246 2de6d622af2922166c7051feefff436a 319 Pfam PF03547 Membrane transport protein 17 154 1.5E-10 T 22-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 YE0246 2de6d622af2922166c7051feefff436a 319 PANTHER PTHR31752 95 316 2.7E-74 T 22-04-2016 YE0246 2de6d622af2922166c7051feefff436a 319 PANTHER PTHR31752:SF13 95 316 2.7E-74 T 22-04-2016 YE3927 3dbe4fc61afc152a1f6faf2b3e52b836 394 SUPERFAMILY SSF50447 205 301 4.91E-31 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain YE3927 3dbe4fc61afc152a1f6faf2b3e52b836 394 SUPERFAMILY SSF52540 9 226 2.18E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3927 3dbe4fc61afc152a1f6faf2b3e52b836 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 2.2E-17 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 YE3927 3dbe4fc61afc152a1f6faf2b3e52b836 394 Gene3D G3DSA:2.40.30.10 300 393 2.8E-46 T 22-04-2016 YE3927 3dbe4fc61afc152a1f6faf2b3e52b836 394 Gene3D G3DSA:3.40.50.300 3 208 1.0E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3927 3dbe4fc61afc152a1f6faf2b3e52b836 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 60.617 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 YE3927 3dbe4fc61afc152a1f6faf2b3e52b836 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 198 1.9E-58 T 22-04-2016 YE3927 3dbe4fc61afc152a1f6faf2b3e52b836 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.9E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YE3927 3dbe4fc61afc152a1f6faf2b3e52b836 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.9E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YE3927 3dbe4fc61afc152a1f6faf2b3e52b836 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.9E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YE3927 3dbe4fc61afc152a1f6faf2b3e52b836 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.9E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YE3927 3dbe4fc61afc152a1f6faf2b3e52b836 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.9E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 YE3927 3dbe4fc61afc152a1f6faf2b3e52b836 394 PANTHER PTHR23115:SF151 1 393 0.0 T 22-04-2016 YE3927 3dbe4fc61afc152a1f6faf2b3e52b836 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 393 2.2E-236 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 YE3927 3dbe4fc61afc152a1f6faf2b3e52b836 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site YE3927 3dbe4fc61afc152a1f6faf2b3e52b836 394 PANTHER PTHR23115 1 393 0.0 T 22-04-2016 YE3927 3dbe4fc61afc152a1f6faf2b3e52b836 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 2.2E-33 T 22-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal YE3927 3dbe4fc61afc152a1f6faf2b3e52b836 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 2.9E-14 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 YE3927 3dbe4fc61afc152a1f6faf2b3e52b836 394 Gene3D G3DSA:2.40.30.10 209 298 7.3E-37 T 22-04-2016 YE3927 3dbe4fc61afc152a1f6faf2b3e52b836 394 SUPERFAMILY SSF50465 298 393 8.63E-36 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal YE2728 c044543535da8f9abbac3ef30357e6f9 98 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 1 48 3.0E-18 T 22-04-2016 YE2728 c044543535da8f9abbac3ef30357e6f9 98 Pfam PF00936 BMC domain 5 80 1.0E-28 T 22-04-2016 IPR000249 Microcompartment protein, bacteria YE2728 c044543535da8f9abbac3ef30357e6f9 98 SUPERFAMILY SSF143414 4 93 1.83E-32 T 22-04-2016 YE2728 c044543535da8f9abbac3ef30357e6f9 98 PANTHER PTHR33941 1 95 3.1E-43 T 22-04-2016 YE2728 c044543535da8f9abbac3ef30357e6f9 98 SMART SM00877 4 80 4.3E-36 T 22-04-2016 IPR000249 Microcompartment protein, bacteria YE2728 c044543535da8f9abbac3ef30357e6f9 98 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 22 41 - T 22-04-2016 IPR020808 Bacterial microcompartments protein, conserved site YE3060 0c8840054bc1d1b5f7951250b60710ac 139 Gene3D G3DSA:1.10.1660.10 56 132 3.2E-26 T 22-04-2016 YE3060 0c8840054bc1d1b5f7951250b60710ac 139 Pfam PF13411 MerR HTH family regulatory protein 1 68 3.7E-19 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YE3060 0c8840054bc1d1b5f7951250b60710ac 139 PANTHER PTHR30204 1 131 2.3E-80 T 22-04-2016 YE3060 0c8840054bc1d1b5f7951250b60710ac 139 SUPERFAMILY SSF46955 1 126 7.33E-35 T 22-04-2016 IPR009061 Putative DNA-binding domain YE3060 0c8840054bc1d1b5f7951250b60710ac 139 PANTHER PTHR30204:SF16 1 131 2.3E-80 T 22-04-2016 YE3060 0c8840054bc1d1b5f7951250b60710ac 139 Gene3D G3DSA:1.10.1660.10 1 55 1.0E-23 T 22-04-2016 YE3060 0c8840054bc1d1b5f7951250b60710ac 139 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 2.4E-57 T 22-04-2016 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 YE3060 0c8840054bc1d1b5f7951250b60710ac 139 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.7E-5 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YE3060 0c8840054bc1d1b5f7951250b60710ac 139 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 1.7E-5 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YE3060 0c8840054bc1d1b5f7951250b60710ac 139 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.7E-5 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YE3060 0c8840054bc1d1b5f7951250b60710ac 139 SMART SM00422 1 70 2.6E-28 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 YE3676 fe641801c5906a8921390b5a9a18a4cf 206 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 27 204 4.2E-53 T 22-04-2016 IPR016476 SH3 domain protein YE3676 fe641801c5906a8921390b5a9a18a4cf 206 Pfam PF08239 Bacterial SH3 domain 34 85 2.1E-8 T 22-04-2016 IPR003646 SH3-like domain, bacterial-type YE3676 fe641801c5906a8921390b5a9a18a4cf 206 SMART SM00287 23 89 1.6E-9 T 22-04-2016 IPR003646 SH3-like domain, bacterial-type YE3676 fe641801c5906a8921390b5a9a18a4cf 206 PIRSF PIRSF006158 1 205 3.2E-70 T 22-04-2016 IPR016476 SH3 domain protein YE3676 fe641801c5906a8921390b5a9a18a4cf 206 PANTHER PTHR23164 1 206 2.5E-51 T 22-04-2016 YE0046 95887177c283af69ca7efab5965e76e3 91 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 2.1E-28 T 22-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YE0046 95887177c283af69ca7efab5965e76e3 91 Gene3D G3DSA:3.90.940.10 1 78 2.3E-16 T 22-04-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YE0046 95887177c283af69ca7efab5965e76e3 91 SMART SM01409 8 61 1.0E-16 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YE0046 95887177c283af69ca7efab5965e76e3 91 Pfam PF01192 RNA polymerase Rpb6 10 60 7.2E-17 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YE0046 95887177c283af69ca7efab5965e76e3 91 PANTHER PTHR34476 2 91 6.9E-32 T 22-04-2016 YE0046 95887177c283af69ca7efab5965e76e3 91 SUPERFAMILY SSF63562 1 79 2.44E-25 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YE0046 95887177c283af69ca7efab5965e76e3 91 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.134 T 22-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 YE2196 f67a56833ff450a7b01a20e154767a51 164 Pfam PF10697 Protein of unknown function (DUF2502) 23 101 9.5E-31 T 22-04-2016 IPR019638 Protein of unknown function DUF2502 YE3493 d5b378f687724f91971999c73b3ce984 706 Pfam PF12696 TraM recognition site of TraD and TraG 505 633 2.3E-11 T 22-04-2016 IPR032689 TraD/TraG, TraM recognition site YE3493 d5b378f687724f91971999c73b3ce984 706 TIGRFAM TIGR03754 conj_TOL_TraD: conjugative coupling factor TraD, PFGI-1 class 7 654 0.0 T 22-04-2016 IPR022503 Conjugative coupling factor TraG/TraD, PFGI-1 YE3493 d5b378f687724f91971999c73b3ce984 706 Gene3D G3DSA:3.40.50.300 443 654 1.2E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3493 d5b378f687724f91971999c73b3ce984 706 Gene3D G3DSA:3.40.50.300 165 259 1.2E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3493 d5b378f687724f91971999c73b3ce984 706 SUPERFAMILY SSF52540 140 331 2.05E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3493 d5b378f687724f91971999c73b3ce984 706 SUPERFAMILY SSF52540 397 655 2.05E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3493 d5b378f687724f91971999c73b3ce984 706 TIGRFAM TIGR03743 SXT_TraD: conjugative coupling factor TraD, SXT/TOL subfamily 7 654 1.1E-273 T 22-04-2016 IPR022458 Conjugative coupling factor TraG/TraD YE3858 d1b37bafd1ec51074300b254a162493a 288 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 10 287 7.6E-111 T 22-04-2016 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 UniPathway: UPA00232 YE3858 d1b37bafd1ec51074300b254a162493a 288 Pfam PF01040 UbiA prenyltransferase family 28 270 3.3E-67 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 YE3858 d1b37bafd1ec51074300b254a162493a 288 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 67 89 - T 22-04-2016 IPR030470 UbiA prenyltransferase conserved site YE3858 d1b37bafd1ec51074300b254a162493a 288 PANTHER PTHR11048 8 288 4.5E-96 T 22-04-2016 YE3858 d1b37bafd1ec51074300b254a162493a 288 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 5 288 30.216 T 22-04-2016 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 UniPathway: UPA00232 YE2801 fe902c435624cc092e17c4aaf984de6d 489 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 80 129 5.2E-8 T 22-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal YE2801 fe902c435624cc092e17c4aaf984de6d 489 PANTHER PTHR22773:SF81 6 483 7.4E-218 T 22-04-2016 YE2801 fe902c435624cc092e17c4aaf984de6d 489 Pfam PF00361 Proton-conducting membrane transporter 143 427 5.2E-57 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 YE2801 fe902c435624cc092e17c4aaf984de6d 489 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 317 329 4.1E-30 T 22-04-2016 YE2801 fe902c435624cc092e17c4aaf984de6d 489 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 226 247 4.1E-30 T 22-04-2016 YE2801 fe902c435624cc092e17c4aaf984de6d 489 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 119 139 4.1E-30 T 22-04-2016 YE2801 fe902c435624cc092e17c4aaf984de6d 489 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 248 274 4.1E-30 T 22-04-2016 YE2801 fe902c435624cc092e17c4aaf984de6d 489 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 85 110 4.1E-30 T 22-04-2016 YE2801 fe902c435624cc092e17c4aaf984de6d 489 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 165 186 4.1E-30 T 22-04-2016 YE2801 fe902c435624cc092e17c4aaf984de6d 489 PANTHER PTHR22773 6 483 7.4E-218 T 22-04-2016 YE3645 858ae3b18c8ef8ded50c8f26b7c6764c 141 TIGRFAM TIGR02803 ExbD_1: TonB system transport protein ExbD 16 136 9.1E-65 T 22-04-2016 IPR014170 TonB system transport protein ExbD type-1 GO:0006810|GO:0016020 YE3645 858ae3b18c8ef8ded50c8f26b7c6764c 141 PANTHER PTHR30558:SF9 11 140 6.2E-81 T 22-04-2016 YE3645 858ae3b18c8ef8ded50c8f26b7c6764c 141 Pfam PF02472 Biopolymer transport protein ExbD/TolR 14 133 1.4E-29 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 YE3645 858ae3b18c8ef8ded50c8f26b7c6764c 141 PANTHER PTHR30558 11 140 6.2E-81 T 22-04-2016 YE2802 b468149a6319905847cf232b3449bf99 221 PANTHER PTHR38601:SF1 4 221 2.8E-44 T 22-04-2016 YE2802 b468149a6319905847cf232b3449bf99 221 PANTHER PTHR38601 4 221 2.8E-44 T 22-04-2016 YE2802 b468149a6319905847cf232b3449bf99 221 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 133 216 1.1E-8 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 YE2802 b468149a6319905847cf232b3449bf99 221 ProDom PD037531 MEMBRANE HYDROGENASE SUBUNIT COMPONENT HYDROGENASE-4 E OXIDOREDUCTASE PRECURSOR SIGNAL 1.-.-.- 30 202 9.0E-55 T 22-04-2016 YE1800 b490fdb21251c40c984b6145a03cabd6 89 SUPERFAMILY SSF46955 4 83 1.01E-22 T 22-04-2016 IPR009061 Putative DNA-binding domain YE1800 b490fdb21251c40c984b6145a03cabd6 89 Gene3D G3DSA:1.10.1660.20 3 87 1.9E-30 T 22-04-2016 IPR012884 Excisionase-like GO:0003677|GO:0006310 YE1800 b490fdb21251c40c984b6145a03cabd6 89 Pfam PF07825 Excisionase-like protein 5 87 1.0E-15 T 22-04-2016 IPR012884 Excisionase-like GO:0003677|GO:0006310 YE3049 be56340f18e7d7ea3efb85cba4b9dcb9 164 Gene3D G3DSA:2.40.100.10 2 162 6.1E-56 T 22-04-2016 IPR029000 Cyclophilin-like domain YE3049 be56340f18e7d7ea3efb85cba4b9dcb9 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 22-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 YE3049 be56340f18e7d7ea3efb85cba4b9dcb9 164 PIRSF PIRSF001467 1 164 9.0E-29 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 YE3049 be56340f18e7d7ea3efb85cba4b9dcb9 164 SUPERFAMILY SSF50891 1 162 1.2E-59 T 22-04-2016 IPR029000 Cyclophilin-like domain YE3049 be56340f18e7d7ea3efb85cba4b9dcb9 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 2.5E-11 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 YE3049 be56340f18e7d7ea3efb85cba4b9dcb9 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 2.5E-11 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 YE3049 be56340f18e7d7ea3efb85cba4b9dcb9 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 2.5E-11 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 YE3049 be56340f18e7d7ea3efb85cba4b9dcb9 164 PANTHER PTHR11071:SF192 1 164 2.7E-84 T 22-04-2016 YE3049 be56340f18e7d7ea3efb85cba4b9dcb9 164 PANTHER PTHR11071 1 164 2.7E-84 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 YE3049 be56340f18e7d7ea3efb85cba4b9dcb9 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 1 162 9.3E-49 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 YE2433 3452a80601a656cc8742cf9d86f9902e 207 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 6 206 30.126 T 22-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 YE2433 3452a80601a656cc8742cf9d86f9902e 207 SUPERFAMILY SSF89392 21 206 1.41E-56 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX YE2433 3452a80601a656cc8742cf9d86f9902e 207 PANTHER PTHR30634 1 207 2.5E-68 T 22-04-2016 YE2433 3452a80601a656cc8742cf9d86f9902e 207 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 7 205 1.3E-75 T 22-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 YE2433 3452a80601a656cc8742cf9d86f9902e 207 PANTHER PTHR30634:SF11 1 207 2.5E-68 T 22-04-2016 YE2433 3452a80601a656cc8742cf9d86f9902e 207 Gene3D G3DSA:2.50.20.10 14 207 1.6E-69 T 22-04-2016 YE2433 3452a80601a656cc8742cf9d86f9902e 207 Pfam PF03550 Outer membrane lipoprotein LolB 51 204 2.8E-47 T 22-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 YE1861 086daccf204dae39fe594d4f9b5e9f84 184 PANTHER PTHR37089:SF4 7 184 1.2E-48 T 22-04-2016 YE1861 086daccf204dae39fe594d4f9b5e9f84 184 PANTHER PTHR37089 7 184 1.2E-48 T 22-04-2016 YE1861 086daccf204dae39fe594d4f9b5e9f84 184 SMART SM00972 122 181 5.7E-19 T 22-04-2016 IPR007893 Spore coat protein U YE1861 086daccf204dae39fe594d4f9b5e9f84 184 Pfam PF05229 Spore Coat Protein U domain 33 181 2.2E-30 T 22-04-2016 IPR007893 Spore coat protein U YE3440 f353c3111d329acd66004f6f2caee086 300 PANTHER PTHR12544 1 300 3.5E-168 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 YE3440 f353c3111d329acd66004f6f2caee086 300 Gene3D G3DSA:3.40.710.10 2 300 3.5E-126 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YE3440 f353c3111d329acd66004f6f2caee086 300 SUPERFAMILY SSF56601 2 300 1.14E-115 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YE3440 f353c3111d329acd66004f6f2caee086 300 TIGRFAM TIGR03814 Gln_ase: glutaminase A 2 300 6.7E-133 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 YE3440 f353c3111d329acd66004f6f2caee086 300 Pfam PF04960 Glutaminase 16 300 3.9E-115 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 YE3440 f353c3111d329acd66004f6f2caee086 300 Hamap MF_00313 Glutaminase [glsA]. 1 300 46.174 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 YE0993 0294d6b454e6be56b2129486a61c0356 409 Pfam PF00589 Phage integrase family 219 382 9.3E-18 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 YE0993 0294d6b454e6be56b2129486a61c0356 409 SUPERFAMILY SSF56349 109 393 3.53E-53 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YE0993 0294d6b454e6be56b2129486a61c0356 409 PANTHER PTHR30629:SF2 2 401 3.2E-147 T 22-04-2016 YE0993 0294d6b454e6be56b2129486a61c0356 409 PANTHER PTHR30629 2 401 3.2E-147 T 22-04-2016 YE0993 0294d6b454e6be56b2129486a61c0356 409 Gene3D G3DSA:1.10.443.10 219 388 1.6E-18 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 YE0993 0294d6b454e6be56b2129486a61c0356 409 Pfam PF13356 Domain of unknown function (DUF4102) 8 94 4.1E-15 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 YE0993 0294d6b454e6be56b2129486a61c0356 409 Gene3D G3DSA:1.10.150.130 109 207 4.7E-18 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal YE0878 deddb17707b4ae37b3e0f85b58ddd9e0 91 ProDom PD068655 ORF26 3'REGION LYS GENE PRECURSOR ORF30 SIGNAL PHAGE 9 90 3.0E-29 T 22-04-2016 IPR024406 Phage tail assembly chaperone TAC_10 YE0878 deddb17707b4ae37b3e0f85b58ddd9e0 91 Pfam PF10963 Phage tail assembly chaperone 9 91 9.1E-28 T 22-04-2016 IPR024406 Phage tail assembly chaperone TAC_10 YE2735 5561834c84615590abaf6a11341630a3 91 PANTHER PTHR33941 1 88 3.2E-45 T 22-04-2016 YE2735 5561834c84615590abaf6a11341630a3 91 Pfam PF00936 BMC domain 4 79 1.3E-29 T 22-04-2016 IPR000249 Microcompartment protein, bacteria YE2735 5561834c84615590abaf6a11341630a3 91 SMART SM00877 3 79 1.8E-38 T 22-04-2016 IPR000249 Microcompartment protein, bacteria YE2735 5561834c84615590abaf6a11341630a3 91 SUPERFAMILY SSF143414 3 89 8.5E-33 T 22-04-2016 YE2735 5561834c84615590abaf6a11341630a3 91 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 4 47 2.0E-16 T 22-04-2016 YE2735 5561834c84615590abaf6a11341630a3 91 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 21 40 - T 22-04-2016 IPR020808 Bacterial microcompartments protein, conserved site YE3018 65297f0762f2998c98f2f69df8626e12 95 PANTHER PTHR33336 1 93 7.0E-32 T 22-04-2016 YE3018 65297f0762f2998c98f2f69df8626e12 95 SUPERFAMILY SSF54909 1 91 3.01E-27 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel YE3018 65297f0762f2998c98f2f69df8626e12 95 PANTHER PTHR33336:SF3 1 93 7.0E-32 T 22-04-2016 YE3018 65297f0762f2998c98f2f69df8626e12 95 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 74 2.8E-14 T 22-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain YE3018 65297f0762f2998c98f2f69df8626e12 95 Gene3D G3DSA:3.30.70.900 1 91 1.5E-27 T 22-04-2016 YE1517 28d34fce532015e4ff48f66ff8f54b09 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 21 101 28.33 T 22-04-2016 IPR022935 ATP-dependent Clp protease adaptor protein ClpS YE1517 28d34fce532015e4ff48f66ff8f54b09 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 23 102 5.9E-34 T 22-04-2016 IPR003769 Adaptor protein ClpS, core GO:0030163 YE1517 28d34fce532015e4ff48f66ff8f54b09 106 SUPERFAMILY SSF54736 21 105 4.24E-33 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like YE1517 28d34fce532015e4ff48f66ff8f54b09 106 Gene3D G3DSA:3.30.1390.10 4 106 2.1E-44 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like YE1517 28d34fce532015e4ff48f66ff8f54b09 106 PANTHER PTHR33473 1 106 7.1E-47 T 22-04-2016 YE0797 e00dec6b19ca0558a2b3195870a04085 82 Pfam PF00550 Phosphopantetheine attachment site 9 75 7.3E-9 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YE0797 e00dec6b19ca0558a2b3195870a04085 82 Gene3D G3DSA:1.10.1200.10 4 81 3.4E-11 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YE0797 e00dec6b19ca0558a2b3195870a04085 82 SUPERFAMILY SSF47336 4 80 1.02E-12 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YE3784 e2aaec1ae4fa0492bceb894df5e1f20b 98 Pfam PF14189 Domain of unknown function (DUF4312) 6 88 1.4E-37 T 22-04-2016 IPR020037 Protein of unknown function DUF4312 YE3784 e2aaec1ae4fa0492bceb894df5e1f20b 98 TIGRFAM TIGR03578 EF_0831: conserved hypothetical protein EF_0831/AHA_3912 2 96 3.4E-39 T 22-04-2016 IPR020037 Protein of unknown function DUF4312 YE1935 32c932bbda724d47ec92048927b54d54 397 Pfam PF01609 Transposase DDE domain 104 323 4.6E-20 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 YE1935 32c932bbda724d47ec92048927b54d54 397 PANTHER PTHR35404 2 397 2.1E-70 T 22-04-2016 YE1935 32c932bbda724d47ec92048927b54d54 397 SUPERFAMILY SSF53098 14 371 3.79E-38 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE3476 32c932bbda724d47ec92048927b54d54 397 Pfam PF01609 Transposase DDE domain 104 323 4.6E-20 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 YE3476 32c932bbda724d47ec92048927b54d54 397 PANTHER PTHR35404 2 397 2.1E-70 T 22-04-2016 YE3476 32c932bbda724d47ec92048927b54d54 397 SUPERFAMILY SSF53098 14 371 3.79E-38 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE0608 034bb9e4c0e7e3d60372115eca47bacf 197 PANTHER PTHR30178:SF6 1 187 8.5E-129 T 22-04-2016 YE0608 034bb9e4c0e7e3d60372115eca47bacf 197 Pfam PF01184 GPR1/FUN34/yaaH family 3 181 6.6E-44 T 22-04-2016 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 YE0608 034bb9e4c0e7e3d60372115eca47bacf 197 PANTHER PTHR30178 1 187 8.5E-129 T 22-04-2016 YE1682 97131d0fb77c07c16cfdd04af3c4ca3d 147 Pfam PF03031 NLI interacting factor-like phosphatase 5 138 4.6E-5 T 22-04-2016 IPR004274 FCP1 homology domain YE1682 97131d0fb77c07c16cfdd04af3c4ca3d 147 Gene3D G3DSA:3.40.50.1000 3 147 2.5E-33 T 22-04-2016 IPR023214 HAD-like domain YE1682 97131d0fb77c07c16cfdd04af3c4ca3d 147 SUPERFAMILY SSF56784 3 146 1.9E-18 T 22-04-2016 IPR023214 HAD-like domain YE2008 97e3d8c73a668a277ee99395176a260f 337 PIRSF PIRSF026166 1 336 9.3E-136 T 22-04-2016 IPR016833 Putative sodium bile acid cotransporter YE2008 97e3d8c73a668a277ee99395176a260f 337 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 10 319 8.0E-105 T 22-04-2016 IPR016833 Putative sodium bile acid cotransporter YE2008 97e3d8c73a668a277ee99395176a260f 337 PANTHER PTHR18640:SF9 1 327 7.6E-134 T 22-04-2016 YE2008 97e3d8c73a668a277ee99395176a260f 337 PANTHER PTHR18640 1 327 7.6E-134 T 22-04-2016 IPR016833 Putative sodium bile acid cotransporter YE3705 1cd0f4cbcc56ae5f57c55fca28fd262a 178 PIRSF PIRSF011443 1 178 1.4E-61 T 22-04-2016 IPR026267 Inner membrane protein YgjV YE3705 1cd0f4cbcc56ae5f57c55fca28fd262a 178 Pfam PF10688 Bacterial inner membrane protein 5 162 4.5E-52 T 22-04-2016 IPR019629 Uncharacterised protein family HI1736/YgjV YE1210 64ccf79204c6943059e11110fe082b5e 340 PANTHER PTHR38685 15 340 2.7E-97 T 22-04-2016 YE1210 64ccf79204c6943059e11110fe082b5e 340 SMART SM00771 200 330 2.2E-79 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 YE1210 64ccf79204c6943059e11110fe082b5e 340 Gene3D G3DSA:3.30.1400.10 200 333 2.8E-61 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 YE1210 64ccf79204c6943059e11110fe082b5e 340 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 17 330 1.5E-82 T 22-04-2016 IPR011919 Cell division protein ZipA GO:0000917|GO:0007049|GO:0016021 YE1210 64ccf79204c6943059e11110fe082b5e 340 SUPERFAMILY SSF64383 201 334 9.42E-49 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 YE1210 64ccf79204c6943059e11110fe082b5e 340 Hamap MF_00509 Cell division protein ZipA [zipA]. 16 332 27.569 T 22-04-2016 IPR011919 Cell division protein ZipA GO:0000917|GO:0007049|GO:0016021 YE1210 64ccf79204c6943059e11110fe082b5e 340 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 203 329 8.3E-50 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 YE1210 64ccf79204c6943059e11110fe082b5e 340 PANTHER PTHR38685:SF1 15 340 2.7E-97 T 22-04-2016 YE1210 64ccf79204c6943059e11110fe082b5e 340 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 223 337 2.0E-62 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 YE3647 bcaed833e79c684bc05421b95c1f3132 403 Gene3D G3DSA:3.90.1150.10 264 399 2.6E-36 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YE3647 bcaed833e79c684bc05421b95c1f3132 403 PIRSF PIRSF001434 1 400 1.1E-115 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 YE3647 bcaed833e79c684bc05421b95c1f3132 403 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 13 397 1.1E-111 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 YE3647 bcaed833e79c684bc05421b95c1f3132 403 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 207 221 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 YE3647 bcaed833e79c684bc05421b95c1f3132 403 PANTHER PTHR11808:SF45 1 401 3.9E-276 T 22-04-2016 YE3647 bcaed833e79c684bc05421b95c1f3132 403 SUPERFAMILY SSF53383 28 398 7.19E-87 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YE3647 bcaed833e79c684bc05421b95c1f3132 403 PANTHER PTHR11808 1 401 3.9E-276 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 YE3647 bcaed833e79c684bc05421b95c1f3132 403 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 13 399 2.0E-168 T 22-04-2016 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936|UniPathway: UPA00051 YE3647 bcaed833e79c684bc05421b95c1f3132 403 Gene3D G3DSA:3.40.640.10 11 263 5.2E-73 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YE2021 c0aad13c9ebb6b70a8652e800fad1c31 430 Gene3D G3DSA:1.20.1250.20 46 226 7.2E-32 T 22-04-2016 YE2021 c0aad13c9ebb6b70a8652e800fad1c31 430 Gene3D G3DSA:1.20.1250.20 252 424 3.7E-13 T 22-04-2016 YE2021 c0aad13c9ebb6b70a8652e800fad1c31 430 PANTHER PTHR23501 17 426 3.9E-211 T 22-04-2016 YE2021 c0aad13c9ebb6b70a8652e800fad1c31 430 ProSitePatterns PS00216 Sugar transport proteins signature 1. 101 117 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 YE2021 c0aad13c9ebb6b70a8652e800fad1c31 430 PANTHER PTHR23501:SF11 17 426 3.9E-211 T 22-04-2016 YE2021 c0aad13c9ebb6b70a8652e800fad1c31 430 Pfam PF07690 Major Facilitator Superfamily 52 269 5.0E-27 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YE2021 c0aad13c9ebb6b70a8652e800fad1c31 430 SUPERFAMILY SSF103473 36 423 2.22E-58 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE3876 3dc0831f913a313835c17b0b38f555a9 279 Pfam PF09339 IclR helix-turn-helix domain 29 79 3.0E-18 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 YE3876 3dc0831f913a313835c17b0b38f555a9 279 SUPERFAMILY SSF55781 98 274 1.7E-50 T 22-04-2016 IPR029016 GAF domain-like YE3876 3dc0831f913a313835c17b0b38f555a9 279 Pfam PF01614 Bacterial transcriptional regulator 148 271 1.3E-39 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal YE3876 3dc0831f913a313835c17b0b38f555a9 279 Gene3D G3DSA:3.30.450.40 99 274 6.4E-59 T 22-04-2016 IPR029016 GAF domain-like YE3876 3dc0831f913a313835c17b0b38f555a9 279 SMART SM00346 27 117 2.8E-33 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 YE3876 3dc0831f913a313835c17b0b38f555a9 279 SUPERFAMILY SSF46785 27 100 1.24E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3876 3dc0831f913a313835c17b0b38f555a9 279 PANTHER PTHR30136:SF3 1 279 2.6E-103 T 22-04-2016 YE3876 3dc0831f913a313835c17b0b38f555a9 279 Gene3D G3DSA:1.10.10.10 17 88 1.4E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3876 3dc0831f913a313835c17b0b38f555a9 279 PANTHER PTHR30136 1 279 2.6E-103 T 22-04-2016 YE2000 98825588b69c1a6c6211cf786929f089 710 SMART SM00382 498 682 6.3E-20 T 22-04-2016 IPR003593 AAA+ ATPase domain YE2000 98825588b69c1a6c6211cf786929f089 710 Gene3D G3DSA:3.40.50.300 472 703 4.5E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2000 98825588b69c1a6c6211cf786929f089 710 Pfam PF00005 ABC transporter 490 638 1.1E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE2000 98825588b69c1a6c6211cf786929f089 710 PANTHER PTHR24221:SF246 140 708 1.1E-200 T 22-04-2016 YE2000 98825588b69c1a6c6211cf786929f089 710 Gene3D G3DSA:1.20.1560.10 145 456 2.2E-73 T 22-04-2016 YE2000 98825588b69c1a6c6211cf786929f089 710 Gene3D G3DSA:3.90.70.10 13 130 6.6E-17 T 22-04-2016 YE2000 98825588b69c1a6c6211cf786929f089 710 Pfam PF00664 ABC transporter transmembrane region 160 426 7.2E-46 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YE2000 98825588b69c1a6c6211cf786929f089 710 TIGRFAM TIGR01846 type_I_sec_HlyB: type I secretion system ATPase 12 710 0.0 T 22-04-2016 IPR010132 ATPase, type I secretion system, HlyB GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 YE2000 98825588b69c1a6c6211cf786929f089 710 Pfam PF03412 Peptidase C39 family 13 131 1.3E-8 T 22-04-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 YE2000 98825588b69c1a6c6211cf786929f089 710 ProSitePatterns PS00211 ABC transporters family signature. 610 624 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE2000 98825588b69c1a6c6211cf786929f089 710 SUPERFAMILY SSF52540 469 708 1.91E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2000 98825588b69c1a6c6211cf786929f089 710 PANTHER PTHR24221 140 708 1.1E-200 T 22-04-2016 YE2000 98825588b69c1a6c6211cf786929f089 710 SUPERFAMILY SSF90123 140 457 3.92E-65 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YE3235 f96689f2f500e993cecc0cb720b8be11 256 PANTHER PTHR23088:SF28 1 251 4.6E-134 T 22-04-2016 YE3235 f96689f2f500e993cecc0cb720b8be11 256 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 137 157 - T 22-04-2016 IPR001110 Uncharacterised protein family UPF0012, conserved site YE3235 f96689f2f500e993cecc0cb720b8be11 256 Gene3D G3DSA:3.60.110.10 3 251 7.0E-60 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 YE3235 f96689f2f500e993cecc0cb720b8be11 256 Pfam PF00795 Carbon-nitrogen hydrolase 6 241 5.1E-31 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 YE3235 f96689f2f500e993cecc0cb720b8be11 256 PANTHER PTHR23088 1 251 4.6E-134 T 22-04-2016 YE3235 f96689f2f500e993cecc0cb720b8be11 256 SUPERFAMILY SSF56317 2 247 1.31E-59 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 YE3584 0bf6d548ae00ff0437bd71bc326b3159 335 Pfam PF01032 FecCD transport family 51 331 4.5E-41 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 YE3584 0bf6d548ae00ff0437bd71bc326b3159 335 Gene3D G3DSA:1.10.3470.10 50 332 4.0E-42 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YE3584 0bf6d548ae00ff0437bd71bc326b3159 335 PANTHER PTHR30472 30 335 1.0E-121 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 YE3584 0bf6d548ae00ff0437bd71bc326b3159 335 PANTHER PTHR30472:SF19 30 335 1.0E-121 T 22-04-2016 YE3584 0bf6d548ae00ff0437bd71bc326b3159 335 SUPERFAMILY SSF81345 26 331 6.28E-45 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YE1198 8dc817f0825fb6436bd96976b3886d64 293 Gene3D G3DSA:3.40.50.1100 40 140 3.1E-37 T 22-04-2016 YE1198 8dc817f0825fb6436bd96976b3886d64 293 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 6 281 2.0E-67 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YE1198 8dc817f0825fb6436bd96976b3886d64 293 TIGRFAM TIGR01138 cysM: cysteine synthase B 3 292 3.5E-150 T 22-04-2016 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 YE1198 8dc817f0825fb6436bd96976b3886d64 293 Gene3D G3DSA:3.40.50.1100 146 292 8.2E-82 T 22-04-2016 YE1198 8dc817f0825fb6436bd96976b3886d64 293 Gene3D G3DSA:3.40.50.1100 2 39 8.2E-82 T 22-04-2016 YE1198 8dc817f0825fb6436bd96976b3886d64 293 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 30 48 - T 22-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 YE1198 8dc817f0825fb6436bd96976b3886d64 293 PANTHER PTHR10314:SF100 3 293 4.7E-176 T 22-04-2016 YE1198 8dc817f0825fb6436bd96976b3886d64 293 TIGRFAM TIGR01136 cysKM: cysteine synthase 5 292 1.1E-122 T 22-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 YE1198 8dc817f0825fb6436bd96976b3886d64 293 PANTHER PTHR10314 3 293 4.7E-176 T 22-04-2016 YE1198 8dc817f0825fb6436bd96976b3886d64 293 SUPERFAMILY SSF53686 3 289 5.5E-92 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YE0465 254c5724ba88bec677d1b59f4166edd7 147 Gene3D G3DSA:2.30.110.10 11 127 1.5E-6 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 YE0465 254c5724ba88bec677d1b59f4166edd7 147 PIRSF PIRSF009554 3 147 4.7E-61 T 22-04-2016 IPR011194 Uncharacterised protein family UPF0306 YE0465 254c5724ba88bec677d1b59f4166edd7 147 Hamap MF_00764 UPF0306 protein YhbP [yhbP]. 6 143 35.059 T 22-04-2016 IPR011194 Uncharacterised protein family UPF0306 YE0465 254c5724ba88bec677d1b59f4166edd7 147 SUPERFAMILY SSF50475 10 130 2.33E-12 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 YE3542A d80907d78ed0ed67e610f0c6f3c98c23 312 PRINTS PR00956 Flagellar motor switch protein FliN signature 279 294 5.1E-6 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 YE3542A d80907d78ed0ed67e610f0c6f3c98c23 312 PRINTS PR00956 Flagellar motor switch protein FliN signature 233 249 5.1E-6 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 YE3542A d80907d78ed0ed67e610f0c6f3c98c23 312 PRINTS PR00956 Flagellar motor switch protein FliN signature 250 266 5.1E-6 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 YE3542A d80907d78ed0ed67e610f0c6f3c98c23 312 Gene3D G3DSA:2.30.330.10 235 305 2.9E-14 T 22-04-2016 YE3542A d80907d78ed0ed67e610f0c6f3c98c23 312 SUPERFAMILY SSF101801 233 305 1.24E-12 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) YE3542A d80907d78ed0ed67e610f0c6f3c98c23 312 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 235 304 8.2E-12 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) YE1271 f8193b8069fae51ab85389c53f43082d 406 Gene3D G3DSA:1.25.40.10 155 204 6.7E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YE1271 f8193b8069fae51ab85389c53f43082d 406 Gene3D G3DSA:1.25.40.10 205 285 7.3E-25 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YE1271 f8193b8069fae51ab85389c53f43082d 406 PANTHER PTHR30009 1 309 5.0E-149 T 22-04-2016 YE1271 f8193b8069fae51ab85389c53f43082d 406 PANTHER PTHR30009:SF10 1 309 5.0E-149 T 22-04-2016 YE1271 f8193b8069fae51ab85389c53f43082d 406 SUPERFAMILY SSF48452 162 266 2.54E-18 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YE1271 f8193b8069fae51ab85389c53f43082d 406 Pfam PF14559 Tetratricopeptide repeat 175 242 8.6E-13 T 22-04-2016 YE1271 f8193b8069fae51ab85389c53f43082d 406 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 2 112 7.6E-31 T 22-04-2016 IPR017560 Cytochrome c-type biogenesis protein CcmI YE0100 59bd7508163fc24766527c732f15252c 282 PANTHER PTHR19139:SF100 12 273 6.4E-98 T 22-04-2016 YE0100 59bd7508163fc24766527c732f15252c 282 Gene3D G3DSA:1.20.1080.10 7 260 1.4E-87 T 22-04-2016 IPR023271 Aquaporin-like YE0100 59bd7508163fc24766527c732f15252c 282 Pfam PF00230 Major intrinsic protein 6 253 3.7E-71 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 YE0100 59bd7508163fc24766527c732f15252c 282 PRINTS PR00783 Major intrinsic protein family signature 50 74 6.0E-52 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 YE0100 59bd7508163fc24766527c732f15252c 282 PRINTS PR00783 Major intrinsic protein family signature 153 171 6.0E-52 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 YE0100 59bd7508163fc24766527c732f15252c 282 PRINTS PR00783 Major intrinsic protein family signature 11 30 6.0E-52 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 YE0100 59bd7508163fc24766527c732f15252c 282 PRINTS PR00783 Major intrinsic protein family signature 87 106 6.0E-52 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 YE0100 59bd7508163fc24766527c732f15252c 282 PRINTS PR00783 Major intrinsic protein family signature 186 208 6.0E-52 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 YE0100 59bd7508163fc24766527c732f15252c 282 PRINTS PR00783 Major intrinsic protein family signature 236 256 6.0E-52 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 YE0100 59bd7508163fc24766527c732f15252c 282 ProSitePatterns PS00221 MIP family signature. 68 76 - T 22-04-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 YE0100 59bd7508163fc24766527c732f15252c 282 TIGRFAM TIGR00861 MIP: MIP family channel proteins 15 253 1.5E-72 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 YE0100 59bd7508163fc24766527c732f15252c 282 PANTHER PTHR19139 12 273 6.4E-98 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 YE0100 59bd7508163fc24766527c732f15252c 282 SUPERFAMILY SSF81338 11 259 2.09E-80 T 22-04-2016 IPR023271 Aquaporin-like YE1102 f5530ffb937af755ee6734043f315559 112 SUPERFAMILY SSF47413 27 87 2.79E-9 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE1102 f5530ffb937af755ee6734043f315559 112 SMART SM00530 31 87 1.2E-6 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YE1102 f5530ffb937af755ee6734043f315559 112 Pfam PF01381 Helix-turn-helix 32 85 5.6E-9 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YE1102 f5530ffb937af755ee6734043f315559 112 Gene3D G3DSA:1.10.260.40 28 87 4.7E-9 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE2829 15286b726f2754c6a057668b3815ec10 261 TIGRFAM TIGR02355 moeB: molybdopterin synthase sulfurylase MoeB 9 247 1.9E-120 T 22-04-2016 IPR012730 Molybdopterin synthase sulfurylase MoeB GO:0006777 MetaCyc: PWY-6823|UniPathway: UPA00344 YE2829 15286b726f2754c6a057668b3815ec10 261 Gene3D G3DSA:3.40.50.720 4 248 1.4E-76 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2829 15286b726f2754c6a057668b3815ec10 261 PANTHER PTHR10953 3 248 2.5E-83 T 22-04-2016 YE2829 15286b726f2754c6a057668b3815ec10 261 Pfam PF00899 ThiF family 12 245 3.9E-61 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 YE2829 15286b726f2754c6a057668b3815ec10 261 SUPERFAMILY SSF69572 3 248 1.44E-83 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 YE2741 acb43535d0d851d8a7634627a820dcef 462 PIRSF PIRSF036410 1 462 2.6E-209 T 22-04-2016 IPR012408 Acetaldehyde/propionaldehyde dehydrogenase, EutE/PduP-related UniPathway: UPA00560 YE2741 acb43535d0d851d8a7634627a820dcef 462 Gene3D G3DSA:3.40.605.10 28 249 3.9E-23 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 YE2741 acb43535d0d851d8a7634627a820dcef 462 PANTHER PTHR11699 1 416 4.5E-157 T 22-04-2016 YE2741 acb43535d0d851d8a7634627a820dcef 462 SUPERFAMILY SSF53720 17 453 1.96E-59 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 YE2741 acb43535d0d851d8a7634627a820dcef 462 Gene3D G3DSA:3.40.309.10 250 421 7.6E-23 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 YE2741 acb43535d0d851d8a7634627a820dcef 462 Pfam PF00171 Aldehyde dehydrogenase family 28 416 1.8E-30 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 YE2741 acb43535d0d851d8a7634627a820dcef 462 PANTHER PTHR11699:SF68 1 416 4.5E-157 T 22-04-2016 YE0899 1954a1edf6377288c2ec12427cb5861f 83 SUPERFAMILY SSF47336 2 81 1.57E-17 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YE0899 1954a1edf6377288c2ec12427cb5861f 83 Pfam PF00550 Phosphopantetheine attachment site 8 75 2.3E-12 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YE0899 1954a1edf6377288c2ec12427cb5861f 83 Gene3D G3DSA:1.10.1200.10 1 81 1.9E-18 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YE0899 1954a1edf6377288c2ec12427cb5861f 83 Hamap MF_01217 Acyl carrier protein [acpP]. 5 79 13.458 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 YE0197 7fa79890bc2aa25ae243311449196457 190 Gene3D G3DSA:1.10.357.10 11 139 1.5E-12 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 YE0197 7fa79890bc2aa25ae243311449196457 190 SUPERFAMILY SSF46689 12 51 9.48E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE0197 7fa79890bc2aa25ae243311449196457 190 PANTHER PTHR30055 1 189 1.2E-53 T 22-04-2016 YE0197 7fa79890bc2aa25ae243311449196457 190 PANTHER PTHR30055:SF40 1 189 1.2E-53 T 22-04-2016 YE1052 49ae18e504da982ff7b2ac6675ad6b8b 330 PANTHER PTHR40659 1 329 2.1E-85 T 22-04-2016 YE1052 49ae18e504da982ff7b2ac6675ad6b8b 330 Pfam PF03824 High-affinity nickel-transport protein 66 317 2.7E-42 T 22-04-2016 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 YE2578 80b1b91e727df167c6f287ce129bcfd7 414 Pfam PF00691 OmpA family 159 253 1.3E-12 T 22-04-2016 IPR006665 OmpA-like domain YE2578 80b1b91e727df167c6f287ce129bcfd7 414 SUPERFAMILY SSF103088 155 263 9.68E-19 T 22-04-2016 IPR006665 OmpA-like domain YE2578 80b1b91e727df167c6f287ce129bcfd7 414 PANTHER PTHR30329 1 287 7.8E-144 T 22-04-2016 YE2578 80b1b91e727df167c6f287ce129bcfd7 414 Gene3D G3DSA:3.30.1330.60 151 263 7.2E-17 T 22-04-2016 IPR006665 OmpA-like domain YE2578 80b1b91e727df167c6f287ce129bcfd7 414 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 12 67 7.2E-21 T 22-04-2016 IPR025713 Motility protein B, N-terminal domain YE2578 80b1b91e727df167c6f287ce129bcfd7 414 PANTHER PTHR30329:SF2 1 287 7.8E-144 T 22-04-2016 YE3814 083e80281279657eb895fd0768499a73 484 PANTHER PTHR11819 2 477 2.7E-299 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 YE3814 083e80281279657eb895fd0768499a73 484 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 155 180 - T 22-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 YE3814 083e80281279657eb895fd0768499a73 484 Pfam PF00474 Sodium:solute symporter family 36 432 5.4E-132 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 YE3814 083e80281279657eb895fd0768499a73 484 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 36 432 8.7E-109 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 YE3814 083e80281279657eb895fd0768499a73 484 TIGRFAM TIGR02119 panF: sodium/pantothenate symporter 4 472 2.8E-240 T 22-04-2016 IPR011849 Sodium/pantothenate symporter GO:0015081|GO:0015233|GO:0015887|GO:0016021|GO:0031402|GO:0071436 YE3814 083e80281279657eb895fd0768499a73 484 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 414 434 - T 22-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 YE3814 083e80281279657eb895fd0768499a73 484 PANTHER PTHR11819:SF125 2 477 2.7E-299 T 22-04-2016 YE2033 6851d396fd65d696563a5ab3ff0adbd3 72 SUPERFAMILY SSF143120 4 56 6.54E-13 T 22-04-2016 YE2033 6851d396fd65d696563a5ab3ff0adbd3 72 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 4 53 6.0E-13 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM YE2033 6851d396fd65d696563a5ab3ff0adbd3 72 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 6 51 1.1E-11 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM YE2033 6851d396fd65d696563a5ab3ff0adbd3 72 Gene3D G3DSA:3.40.1620.10 4 51 6.7E-12 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM YE3506 8bab4cd8fc71e9b201aac94c12695ba5 324 Pfam PF10671 Toxin co-regulated pilus biosynthesis protein Q 237 319 2.9E-21 T 22-04-2016 IPR018927 Toxin co-regulated pilus biosynthesis protein Q, C-terminal YE3506 8bab4cd8fc71e9b201aac94c12695ba5 324 TIGRFAM TIGR03748 conj_PilL: integrating conjugative element protein PilL, PFGI-1 class 56 160 2.2E-44 T 22-04-2016 IPR022260 Integrating conjugative element protein PilL, PFGI-1 YE1175 9016f605cd85c8ae8079c0222249a334 435 PANTHER PTHR30124:SF2 227 416 7.0E-14 T 22-04-2016 YE1175 9016f605cd85c8ae8079c0222249a334 435 Pfam PF07804 HipA-like C-terminal domain 272 414 1.8E-26 T 22-04-2016 IPR012893 HipA-like, C-terminal YE1175 9016f605cd85c8ae8079c0222249a334 435 PANTHER PTHR30124 227 416 7.0E-14 T 22-04-2016 YE1175 9016f605cd85c8ae8079c0222249a334 435 Pfam PF07805 HipA-like N-terminal domain 169 266 1.5E-15 T 22-04-2016 IPR012894 HipA, N-terminal subdomain 2 YE1175 9016f605cd85c8ae8079c0222249a334 435 Pfam PF13657 HipA N-terminal domain 7 117 6.1E-20 T 22-04-2016 IPR017508 HipA, N-terminal subdomain 1 YE0253 d1d6e20e7b05181b4225d61750339be1 605 PANTHER PTHR30252 5 550 2.0E-227 T 22-04-2016 YE0253 d1d6e20e7b05181b4225d61750339be1 605 PANTHER PTHR30252:SF3 5 550 2.0E-227 T 22-04-2016 YE0253 d1d6e20e7b05181b4225d61750339be1 605 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 419 540 3.6E-27 T 22-04-2016 IPR025299 CstA, C-terminal domain YE0253 d1d6e20e7b05181b4225d61750339be1 605 Pfam PF02554 Carbon starvation protein CstA 6 369 9.5E-139 T 22-04-2016 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 YE3605 d53c37f5f69249c70e8dd686fe6e08bb 163 PANTHER PTHR30302:SF1 1 163 1.8E-60 T 22-04-2016 YE3605 d53c37f5f69249c70e8dd686fe6e08bb 163 SUPERFAMILY SSF53163 1 158 5.62E-45 T 22-04-2016 IPR023430 Peptidase HybD-like domain YE3605 d53c37f5f69249c70e8dd686fe6e08bb 163 PRINTS PR00446 Hydrogen uptake protein signature 15 26 2.2E-22 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 YE3605 d53c37f5f69249c70e8dd686fe6e08bb 163 PRINTS PR00446 Hydrogen uptake protein signature 3 15 2.2E-22 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 YE3605 d53c37f5f69249c70e8dd686fe6e08bb 163 PRINTS PR00446 Hydrogen uptake protein signature 67 83 2.2E-22 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 YE3605 d53c37f5f69249c70e8dd686fe6e08bb 163 PRINTS PR00446 Hydrogen uptake protein signature 35 52 2.2E-22 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 YE3605 d53c37f5f69249c70e8dd686fe6e08bb 163 PRINTS PR00446 Hydrogen uptake protein signature 56 66 2.2E-22 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 YE3605 d53c37f5f69249c70e8dd686fe6e08bb 163 Pfam PF01750 Hydrogenase maturation protease 20 146 6.5E-34 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 YE3605 d53c37f5f69249c70e8dd686fe6e08bb 163 PANTHER PTHR30302 1 163 1.8E-60 T 22-04-2016 YE3605 d53c37f5f69249c70e8dd686fe6e08bb 163 TIGRFAM TIGR00140 hupD: hydrogenase expression/formation protein 3 152 5.8E-49 T 22-04-2016 IPR004419 Peptidase A31, hydrogenase expression/formation protein GO:0016485|GO:0046872 YE3605 d53c37f5f69249c70e8dd686fe6e08bb 163 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 4 148 1.0E-45 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 YE3605 d53c37f5f69249c70e8dd686fe6e08bb 163 Gene3D G3DSA:3.40.50.1450 1 158 1.2E-49 T 22-04-2016 IPR023430 Peptidase HybD-like domain YE1263 654eb44203dd5183bd43ff8cf29f28ce 208 PANTHER PTHR24220 3 191 3.3E-102 T 22-04-2016 YE1263 654eb44203dd5183bd43ff8cf29f28ce 208 Pfam PF00005 ABC transporter 18 157 7.5E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE1263 654eb44203dd5183bd43ff8cf29f28ce 208 SMART SM00382 26 194 0.002 T 22-04-2016 IPR003593 AAA+ ATPase domain YE1263 654eb44203dd5183bd43ff8cf29f28ce 208 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 201 3.9E-79 T 22-04-2016 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 YE1263 654eb44203dd5183bd43ff8cf29f28ce 208 Gene3D G3DSA:3.40.50.300 1 188 1.0E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1263 654eb44203dd5183bd43ff8cf29f28ce 208 PANTHER PTHR24220:SF508 3 191 3.3E-102 T 22-04-2016 YE1263 654eb44203dd5183bd43ff8cf29f28ce 208 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE1263 654eb44203dd5183bd43ff8cf29f28ce 208 SUPERFAMILY SSF52540 2 188 9.59E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1421 35818fae5f4ef62f931d7b19646e8c38 333 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 330 45.418 T 22-04-2016 IPR007358 Nucleoid-associated protein NdpA GO:0009295 YE1421 35818fae5f4ef62f931d7b19646e8c38 333 Pfam PF04245 37-kD nucleoid-associated bacterial protein 10 324 6.8E-99 T 22-04-2016 IPR007358 Nucleoid-associated protein NdpA GO:0009295 YE1421 35818fae5f4ef62f931d7b19646e8c38 333 PANTHER PTHR38772 2 333 2.1E-181 T 22-04-2016 YE2954 802ca53938b4133728e3b63d995c719a 316 Gene3D G3DSA:2.40.100.10 177 295 4.5E-6 T 22-04-2016 IPR029000 Cyclophilin-like domain YE2954 802ca53938b4133728e3b63d995c719a 316 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 1 306 1.6E-119 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B YE2954 802ca53938b4133728e3b63d995c719a 316 SUPERFAMILY SSF50891 173 288 1.44E-11 T 22-04-2016 IPR029000 Cyclophilin-like domain YE2954 802ca53938b4133728e3b63d995c719a 316 PANTHER PTHR18866 139 261 1.1E-44 T 22-04-2016 YE2954 802ca53938b4133728e3b63d995c719a 316 Pfam PF02626 Allophanate hydrolase subunit 2 24 281 7.0E-90 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B YE2954 802ca53938b4133728e3b63d995c719a 316 SMART SM00797 23 298 1.1E-140 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B YE3548 f437b520a98eb66858feddf51edfe213 563 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 502 521 5.7E-35 T 22-04-2016 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 YE3548 f437b520a98eb66858feddf51edfe213 563 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 312 332 5.7E-35 T 22-04-2016 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 YE3548 f437b520a98eb66858feddf51edfe213 563 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 376 395 5.7E-35 T 22-04-2016 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 YE3548 f437b520a98eb66858feddf51edfe213 563 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 410 425 5.7E-35 T 22-04-2016 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 YE3548 f437b520a98eb66858feddf51edfe213 563 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 200 217 5.7E-35 T 22-04-2016 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 YE3548 f437b520a98eb66858feddf51edfe213 563 Pfam PF03958 Bacterial type II/III secretion system short domain 188 310 3.8E-17 T 22-04-2016 IPR005644 NolW-like YE3548 f437b520a98eb66858feddf51edfe213 563 PANTHER PTHR30332:SF5 74 227 3.1E-68 T 22-04-2016 YE3548 f437b520a98eb66858feddf51edfe213 563 PANTHER PTHR30332:SF5 254 525 3.1E-68 T 22-04-2016 YE3548 f437b520a98eb66858feddf51edfe213 563 Pfam PF00263 Bacterial type II and III secretion system protein 363 523 1.6E-35 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 YE3548 f437b520a98eb66858feddf51edfe213 563 TIGRFAM TIGR02516 type_III_yscC: type III secretion outer membrane pore, YscC/HrcC family 41 524 6.5E-131 T 22-04-2016 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 YE3548 f437b520a98eb66858feddf51edfe213 563 PANTHER PTHR30332 74 227 3.1E-68 T 22-04-2016 YE3548 f437b520a98eb66858feddf51edfe213 563 PANTHER PTHR30332 254 525 3.1E-68 T 22-04-2016 YE0710 cf4982e68e83ab2da8fe99a7c72358a7 287 Pfam PF01564 Spermine/spermidine synthase 9 240 2.1E-85 T 22-04-2016 YE0710 cf4982e68e83ab2da8fe99a7c72358a7 287 Gene3D G3DSA:3.40.50.150 56 283 5.5E-82 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE0710 cf4982e68e83ab2da8fe99a7c72358a7 287 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 81 94 - T 22-04-2016 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 YE0710 cf4982e68e83ab2da8fe99a7c72358a7 287 PANTHER PTHR11558 7 283 1.4E-120 T 22-04-2016 YE0710 cf4982e68e83ab2da8fe99a7c72358a7 287 Gene3D G3DSA:2.30.140.10 1 54 2.6E-18 T 22-04-2016 YE0710 cf4982e68e83ab2da8fe99a7c72358a7 287 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 6 284 39.306 T 22-04-2016 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 YE0710 cf4982e68e83ab2da8fe99a7c72358a7 287 TIGRFAM TIGR00417 speE: spermidine synthase 7 278 4.1E-117 T 22-04-2016 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 YE0710 cf4982e68e83ab2da8fe99a7c72358a7 287 SUPERFAMILY SSF53335 6 283 5.97E-88 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE3587 dd8f468fafed69e73ec986622e6fd368 155 PANTHER PTHR11746 1 155 6.5E-24 T 22-04-2016 YE3587 dd8f468fafed69e73ec986622e6fd368 155 Gene3D G3DSA:3.40.50.150 2 155 5.5E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE3587 dd8f468fafed69e73ec986622e6fd368 155 PANTHER PTHR11746:SF63 1 155 6.5E-24 T 22-04-2016 YE3587 dd8f468fafed69e73ec986622e6fd368 155 Pfam PF00891 O-methyltransferase 6 153 1.5E-21 T 22-04-2016 IPR001077 O-methyltransferase, family 2 GO:0008171 YE3587 dd8f468fafed69e73ec986622e6fd368 155 SUPERFAMILY SSF53335 4 153 1.77E-22 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE0725 6e4a5c9c555b0da2501b1a6b54d0d155 151 PANTHER PTHR33823 8 149 3.8E-70 T 22-04-2016 YE0725 6e4a5c9c555b0da2501b1a6b54d0d155 151 PRINTS PR00618 DksA/TraR zinc finger signature 114 125 9.9E-5 T 22-04-2016 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria YE0725 6e4a5c9c555b0da2501b1a6b54d0d155 151 PRINTS PR00618 DksA/TraR zinc finger signature 126 138 9.9E-5 T 22-04-2016 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria YE0725 6e4a5c9c555b0da2501b1a6b54d0d155 151 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 28 150 29.866 T 22-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 YE0725 6e4a5c9c555b0da2501b1a6b54d0d155 151 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 111 143 3.8E-10 T 22-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 YE0725 6e4a5c9c555b0da2501b1a6b54d0d155 151 SUPERFAMILY SSF109635 9 110 2.88E-37 T 22-04-2016 YE0725 6e4a5c9c555b0da2501b1a6b54d0d155 151 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 32 140 7.0E-51 T 22-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 YE0725 6e4a5c9c555b0da2501b1a6b54d0d155 151 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 114 138 - T 22-04-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site YE0725 6e4a5c9c555b0da2501b1a6b54d0d155 151 SUPERFAMILY SSF57716 111 149 5.7E-10 T 22-04-2016 YE0725 6e4a5c9c555b0da2501b1a6b54d0d155 151 PANTHER PTHR33823:SF2 8 149 3.8E-70 T 22-04-2016 YE2724 fa8c1a09fc3695c1b0c6a19e1f32e631 318 Pfam PF03186 CobD/Cbib protein 7 297 1.9E-105 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 YE2724 fa8c1a09fc3695c1b0c6a19e1f32e631 318 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 7 298 1.5E-72 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 YE2724 fa8c1a09fc3695c1b0c6a19e1f32e631 318 PANTHER PTHR34308 5 318 5.1E-112 T 22-04-2016 YE2724 fa8c1a09fc3695c1b0c6a19e1f32e631 318 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 318 106.336 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 YE2724 fa8c1a09fc3695c1b0c6a19e1f32e631 318 PANTHER PTHR34308:SF1 5 318 5.1E-112 T 22-04-2016 YE3922 8906d138700526811fc3942b305ab643 201 SUPERFAMILY SSF52166 10 200 1.15E-72 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 YE3922 8906d138700526811fc3942b305ab643 201 Gene3D G3DSA:3.40.1370.10 54 201 5.3E-59 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 YE3922 8906d138700526811fc3942b305ab643 201 Pfam PF00573 Ribosomal protein L4/L1 family 13 198 6.2E-64 T 22-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 YE3922 8906d138700526811fc3942b305ab643 201 PANTHER PTHR10746 11 200 1.1E-93 T 22-04-2016 IPR013005 50S ribosomal protein uL4 YE3922 8906d138700526811fc3942b305ab643 201 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 13 198 1.6E-74 T 22-04-2016 IPR013005 50S ribosomal protein uL4 YE3922 8906d138700526811fc3942b305ab643 201 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 6 201 33.865 T 22-04-2016 IPR013005 50S ribosomal protein uL4 YE2693 d2efc59c6dc8b1aa289a16e3619e8268 891 Pfam PF13954 PapC N-terminal domain 61 208 7.3E-37 T 22-04-2016 IPR025885 PapC, N-terminal domain GO:0005515 YE2693 d2efc59c6dc8b1aa289a16e3619e8268 891 PANTHER PTHR30451 26 865 1.1E-205 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YE2693 d2efc59c6dc8b1aa289a16e3619e8268 891 SUPERFAMILY SSF141729 59 186 1.57E-27 T 22-04-2016 YE2693 d2efc59c6dc8b1aa289a16e3619e8268 891 Pfam PF00577 Outer membrane usher protein 233 793 2.0E-142 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YE2693 d2efc59c6dc8b1aa289a16e3619e8268 891 Pfam PF13953 PapC C-terminal domain 808 865 1.6E-7 T 22-04-2016 IPR025949 PapC-like, C-terminal domain YE2187 2e6a00c25899dd244afd0bc5f0c16af9 114 PANTHER PTHR30561:SF9 1 113 4.5E-42 T 22-04-2016 YE2187 2e6a00c25899dd244afd0bc5f0c16af9 114 PANTHER PTHR30561 1 113 4.5E-42 T 22-04-2016 YE2187 2e6a00c25899dd244afd0bc5f0c16af9 114 SUPERFAMILY SSF103481 35 113 2.62E-13 T 22-04-2016 YE2187 2e6a00c25899dd244afd0bc5f0c16af9 114 Hamap MF_01869 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE [arnE]. 2 114 29.337 T 22-04-2016 IPR022883 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE UniPathway: UPA00030 YE2187 2e6a00c25899dd244afd0bc5f0c16af9 114 Pfam PF00892 EamA-like transporter family 23 111 1.1E-9 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YE4203 52e85f93c367c5fb7e2dea1b61880395 609 Pfam PF01380 SIS domain 462 591 1.1E-27 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 YE4203 52e85f93c367c5fb7e2dea1b61880395 609 Pfam PF01380 SIS domain 289 417 1.6E-33 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 YE4203 52e85f93c367c5fb7e2dea1b61880395 609 SUPERFAMILY SSF56235 2 233 3.09E-74 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal YE4203 52e85f93c367c5fb7e2dea1b61880395 609 Pfam PF13522 Glutamine amidotransferase domain 62 184 3.4E-21 T 22-04-2016 YE4203 52e85f93c367c5fb7e2dea1b61880395 609 Gene3D G3DSA:3.40.50.10490 450 609 1.1E-67 T 22-04-2016 YE4203 52e85f93c367c5fb7e2dea1b61880395 609 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 609 41.047 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 YE4203 52e85f93c367c5fb7e2dea1b61880395 609 SUPERFAMILY SSF53697 245 609 4.07E-113 T 22-04-2016 YE4203 52e85f93c367c5fb7e2dea1b61880395 609 PANTHER PTHR10937:SF0 1 609 0.0 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 YE4203 52e85f93c367c5fb7e2dea1b61880395 609 Gene3D G3DSA:3.40.50.10490 245 449 8.2E-65 T 22-04-2016 YE4203 52e85f93c367c5fb7e2dea1b61880395 609 PANTHER PTHR10937 1 609 0.0 T 22-04-2016 YE4203 52e85f93c367c5fb7e2dea1b61880395 609 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 609 1.9E-263 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 YE4203 52e85f93c367c5fb7e2dea1b61880395 609 Gene3D G3DSA:3.60.20.10 2 239 2.9E-79 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal YE3245 f14238e1821186e34a1cf6a758b3e870 146 Gene3D G3DSA:3.40.30.10 33 139 1.3E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold YE3245 f14238e1821186e34a1cf6a758b3e870 146 Pfam PF00085 Thioredoxin 38 137 3.4E-27 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 YE3245 f14238e1821186e34a1cf6a758b3e870 146 PANTHER PTHR10438:SF266 9 145 1.3E-64 T 22-04-2016 YE3245 f14238e1821186e34a1cf6a758b3e870 146 ProSitePatterns PS00194 Thioredoxin family active site. 56 74 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 YE3245 f14238e1821186e34a1cf6a758b3e870 146 PRINTS PR00421 Thioredoxin family signature 63 72 3.8E-8 T 22-04-2016 YE3245 f14238e1821186e34a1cf6a758b3e870 146 PRINTS PR00421 Thioredoxin family signature 103 114 3.8E-8 T 22-04-2016 YE3245 f14238e1821186e34a1cf6a758b3e870 146 PRINTS PR00421 Thioredoxin family signature 55 63 3.8E-8 T 22-04-2016 YE3245 f14238e1821186e34a1cf6a758b3e870 146 PANTHER PTHR10438 9 145 1.3E-64 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 YE3245 f14238e1821186e34a1cf6a758b3e870 146 SUPERFAMILY SSF52833 25 142 4.77E-38 T 22-04-2016 IPR012336 Thioredoxin-like fold YE3245 f14238e1821186e34a1cf6a758b3e870 146 TIGRFAM TIGR01068 thioredoxin: thioredoxin 43 138 5.3E-35 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 YE0333 7cb91a1def12334da9061f9384e295cd 216 SUPERFAMILY SSF51735 2 207 7.24E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain YE0333 7cb91a1def12334da9061f9384e295cd 216 PANTHER PTHR15020 1 206 1.9E-37 T 22-04-2016 YE0333 7cb91a1def12334da9061f9384e295cd 216 Gene3D G3DSA:3.40.50.720 2 207 1.6E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain YE0333 7cb91a1def12334da9061f9384e295cd 216 Pfam PF13460 NAD(P)H-binding 28 195 1.8E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain YE0462 4626b8546301fb18fa95972aa93988c8 279 Gene3D G3DSA:1.10.3720.10 3 266 9.2E-56 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE0462 4626b8546301fb18fa95972aa93988c8 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 272 2.0E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE0462 4626b8546301fb18fa95972aa93988c8 279 PANTHER PTHR32243 1 279 1.3E-152 T 22-04-2016 YE0462 4626b8546301fb18fa95972aa93988c8 279 SUPERFAMILY SSF161098 3 279 7.48E-66 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE0462 4626b8546301fb18fa95972aa93988c8 279 PANTHER PTHR32243:SF38 1 279 1.3E-152 T 22-04-2016 YE3901 36b24613b794edc4fbba17e3f435aac6 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 5.0E-33 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3901 36b24613b794edc4fbba17e3f435aac6 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 22-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 YE3901 36b24613b794edc4fbba17e3f435aac6 118 PIRSF PIRSF002134 1 118 5.6E-42 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3901 36b24613b794edc4fbba17e3f435aac6 118 Gene3D G3DSA:1.10.8.50 2 71 4.3E-29 T 22-04-2016 YE3901 36b24613b794edc4fbba17e3f435aac6 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 26.125 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3901 36b24613b794edc4fbba17e3f435aac6 118 PANTHER PTHR10871 2 118 2.0E-68 T 22-04-2016 YE3901 36b24613b794edc4fbba17e3f435aac6 118 SUPERFAMILY SSF46946 2 114 3.68E-46 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 YE3901 36b24613b794edc4fbba17e3f435aac6 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 1.2E-52 T 22-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3901 36b24613b794edc4fbba17e3f435aac6 118 Gene3D G3DSA:4.10.910.10 72 118 7.5E-26 T 22-04-2016 IPR027437 30s ribosomal protein S13, C-terminal YE0495 800cf07df5e8d1acdc6e6241d26156fc 143 PIRSF PIRSF018193 1 143 2.4E-68 T 22-04-2016 IPR016716 Regulator of ribonuclease activity B YE0495 800cf07df5e8d1acdc6e6241d26156fc 143 Pfam PF06877 Regulator of ribonuclease activity B 12 113 9.5E-34 T 22-04-2016 IPR009671 Regulator of ribonuclease activity B domain YE0495 800cf07df5e8d1acdc6e6241d26156fc 143 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 4 117 30.973 T 22-04-2016 IPR016716 Regulator of ribonuclease activity B YE0495 800cf07df5e8d1acdc6e6241d26156fc 143 SUPERFAMILY SSF89946 3 123 6.93E-42 T 22-04-2016 IPR009671 Regulator of ribonuclease activity B domain YE0495 800cf07df5e8d1acdc6e6241d26156fc 143 Gene3D G3DSA:3.30.70.970 1 124 1.2E-53 T 22-04-2016 IPR009671 Regulator of ribonuclease activity B domain YE1213 fea8185ed881633b49b829250c528ca0 113 Pfam PF00992 Troponin 25 105 1.3E-5 T 22-04-2016 IPR001978 Troponin GO:0005861 Reactome: REACT_17044 YE1213 fea8185ed881633b49b829250c528ca0 113 Pfam PF14282 FlxA-like protein 9 105 1.4E-21 T 22-04-2016 IPR025577 FlxA-like protein YE3012 c9980a06935f906d47056aa4c63595cb 69 PIRSF PIRSF002599 1 69 9.1E-26 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 YE3012 c9980a06935f906d47056aa4c63595cb 69 SUPERFAMILY SSF50249 3 68 1.35E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE3012 c9980a06935f906d47056aa4c63595cb 69 PRINTS PR00050 Cold shock protein signature 27 36 2.0E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YE3012 c9980a06935f906d47056aa4c63595cb 69 PRINTS PR00050 Cold shock protein signature 42 60 2.0E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YE3012 c9980a06935f906d47056aa4c63595cb 69 PRINTS PR00050 Cold shock protein signature 6 21 2.0E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YE3012 c9980a06935f906d47056aa4c63595cb 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 4.6E-33 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 YE3012 c9980a06935f906d47056aa4c63595cb 69 SMART SM00357 5 69 4.3E-33 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 YE3012 c9980a06935f906d47056aa4c63595cb 69 PANTHER PTHR11544 1 69 5.9E-42 T 22-04-2016 YE3012 c9980a06935f906d47056aa4c63595cb 69 Gene3D G3DSA:2.40.50.140 4 67 1.0E-31 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE3012 c9980a06935f906d47056aa4c63595cb 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 22-04-2016 IPR019844 Cold-shock conserved site YE2059 655df31f965001633744277097cd1a84 808 Pfam PF10139 Putative bacterial virulence factor 24 456 4.2E-131 T 22-04-2016 IPR017030 Virulence effector, SrfC YE2059 655df31f965001633744277097cd1a84 808 Pfam PF10139 Putative bacterial virulence factor 455 799 2.4E-65 T 22-04-2016 IPR017030 Virulence effector, SrfC YE3071 f5941c8cb7dbdb21d1e7bf0e49153883 336 Gene3D G3DSA:3.90.25.10 180 335 4.7E-48 T 22-04-2016 YE3071 f5941c8cb7dbdb21d1e7bf0e49153883 336 PANTHER PTHR10366:SF39 2 335 4.1E-139 T 22-04-2016 YE3071 f5941c8cb7dbdb21d1e7bf0e49153883 336 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 333 9.6E-131 T 22-04-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|UniPathway: UPA00214 YE3071 f5941c8cb7dbdb21d1e7bf0e49153883 336 Gene3D G3DSA:3.40.50.720 1 179 9.8E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3071 f5941c8cb7dbdb21d1e7bf0e49153883 336 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 322 2.8E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3071 f5941c8cb7dbdb21d1e7bf0e49153883 336 SUPERFAMILY SSF51735 1 334 2.74E-90 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3071 f5941c8cb7dbdb21d1e7bf0e49153883 336 PANTHER PTHR10366 2 335 4.1E-139 T 22-04-2016 YE1591 1ec55079dd483d3841f6cf8d3257321d 272 Pfam PF13276 HTH-like domain 28 81 2.4E-19 T 22-04-2016 IPR025948 HTH-like domain YE1591 1ec55079dd483d3841f6cf8d3257321d 272 PANTHER PTHR32552 1 265 8.5E-73 T 22-04-2016 YE1591 1ec55079dd483d3841f6cf8d3257321d 272 SUPERFAMILY SSF53098 100 258 6.83E-30 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE1591 1ec55079dd483d3841f6cf8d3257321d 272 Gene3D G3DSA:3.30.420.10 98 256 6.0E-27 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE1591 1ec55079dd483d3841f6cf8d3257321d 272 Pfam PF13333 Integrase core domain 209 263 2.5E-24 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YE1317 edd68e06073b8145b7d151096ea26ec2 190 SUPERFAMILY SSF52507 2 187 2.62E-59 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 YE1317 edd68e06073b8145b7d151096ea26ec2 190 Gene3D G3DSA:3.40.50.1950 2 188 8.2E-77 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 YE1317 edd68e06073b8145b7d151096ea26ec2 190 PANTHER PTHR30108 2 188 4.3E-124 T 22-04-2016 YE1317 edd68e06073b8145b7d151096ea26ec2 190 Pfam PF02441 Flavoprotein 2 127 4.6E-25 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 YE1317 edd68e06073b8145b7d151096ea26ec2 190 PANTHER PTHR30108:SF10 2 188 4.3E-124 T 22-04-2016 YE1317 edd68e06073b8145b7d151096ea26ec2 190 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 3 186 6.6E-70 T 22-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 YE1317 edd68e06073b8145b7d151096ea26ec2 190 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 2 188 36.932 T 22-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 YE0633 5da6b7982088c2f4b3d74fe798232436 788 Gene3D G3DSA:2.60.450.10 46 208 3.1E-24 T 22-04-2016 YE0633 5da6b7982088c2f4b3d74fe798232436 788 PANTHER PTHR30189 1 786 5.6E-132 T 22-04-2016 YE0633 5da6b7982088c2f4b3d74fe798232436 788 Pfam PF03968 OstA-like protein 53 193 3.0E-30 T 22-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal YE0633 5da6b7982088c2f4b3d74fe798232436 788 Pfam PF04453 Organic solvent tolerance protein 307 701 2.7E-105 T 22-04-2016 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 YE0633 5da6b7982088c2f4b3d74fe798232436 788 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 9 767 20.862 T 22-04-2016 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 YE0221 82afcb38fa05adb83f82f375297fd884 106 Pfam PF08850 Domain of unknown function (DUF1820) 7 99 3.7E-40 T 22-04-2016 IPR014949 Protein of unknown function DUF1820 YE0221 82afcb38fa05adb83f82f375297fd884 106 PIRSF PIRSF028538 1 106 3.1E-43 T 22-04-2016 IPR014949 Protein of unknown function DUF1820 YE1060 05176937a0e72a3617e94bb2352f82e4 174 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 169 8.1E-52 T 22-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 YE1060 05176937a0e72a3617e94bb2352f82e4 174 SUPERFAMILY SSF47144 78 171 7.45E-24 T 22-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 YE1060 05176937a0e72a3617e94bb2352f82e4 174 Pfam PF00226 DnaJ domain 2 70 5.3E-7 T 22-04-2016 IPR001623 DnaJ domain YE1060 05176937a0e72a3617e94bb2352f82e4 174 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 170 25.351 T 22-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 YE1060 05176937a0e72a3617e94bb2352f82e4 174 PANTHER PTHR14021 1 174 5.0E-61 T 22-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 YE1060 05176937a0e72a3617e94bb2352f82e4 174 PANTHER PTHR14021:SF15 1 174 5.0E-61 T 22-04-2016 YE1060 05176937a0e72a3617e94bb2352f82e4 174 Gene3D G3DSA:1.20.1280.20 81 171 1.4E-29 T 22-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 YE1060 05176937a0e72a3617e94bb2352f82e4 174 SMART SM00271 1 66 1.9E-10 T 22-04-2016 IPR001623 DnaJ domain YE1060 05176937a0e72a3617e94bb2352f82e4 174 Pfam PF07743 HSCB C-terminal oligomerisation domain 88 163 4.4E-15 T 22-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 YE1060 05176937a0e72a3617e94bb2352f82e4 174 SUPERFAMILY SSF46565 1 74 2.36E-18 T 22-04-2016 IPR001623 DnaJ domain YE1060 05176937a0e72a3617e94bb2352f82e4 174 Gene3D G3DSA:1.10.287.110 1 73 4.2E-27 T 22-04-2016 IPR001623 DnaJ domain YE4038 375312dbd1aa93a0d6fa7eeef85efbc9 260 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 5 215 1.9E-41 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 YE4038 375312dbd1aa93a0d6fa7eeef85efbc9 260 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 4 239 3.7E-91 T 22-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YE4038 375312dbd1aa93a0d6fa7eeef85efbc9 260 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 84 117 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YE4038 375312dbd1aa93a0d6fa7eeef85efbc9 260 Gene3D G3DSA:3.30.950.10 120 250 5.0E-43 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 YE4038 375312dbd1aa93a0d6fa7eeef85efbc9 260 Gene3D G3DSA:3.40.1010.10 4 119 4.4E-40 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 YE4038 375312dbd1aa93a0d6fa7eeef85efbc9 260 SUPERFAMILY SSF53790 2 238 1.83E-71 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 YE4038 375312dbd1aa93a0d6fa7eeef85efbc9 260 PANTHER PTHR21091 4 241 5.7E-73 T 22-04-2016 YE4038 375312dbd1aa93a0d6fa7eeef85efbc9 260 PANTHER PTHR21091:SF16 4 241 5.7E-73 T 22-04-2016 YE4038 375312dbd1aa93a0d6fa7eeef85efbc9 260 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 9 23 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YE0938 6884c3838599f6bed312e0d649a190ea 149 ProDom PD093913 YICN MEMBRANE INNER EXPORTED 1 149 5.0E-62 T 22-04-2016 IPR009587 Protein of unknown function DUF1198 YE0938 6884c3838599f6bed312e0d649a190ea 149 Pfam PF06711 Protein of unknown function (DUF1198) 1 143 5.1E-62 T 22-04-2016 IPR009587 Protein of unknown function DUF1198 YE1425 e87ee497135c3d319716c5597ac9fc99 390 PANTHER PTHR23502:SF39 1 382 7.8E-214 T 22-04-2016 YE1425 e87ee497135c3d319716c5597ac9fc99 390 Pfam PF07690 Major Facilitator Superfamily 6 348 1.7E-46 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YE1425 e87ee497135c3d319716c5597ac9fc99 390 Gene3D G3DSA:1.20.1250.20 2 185 1.3E-34 T 22-04-2016 YE1425 e87ee497135c3d319716c5597ac9fc99 390 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 2 380 2.4E-135 T 22-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 YE1425 e87ee497135c3d319716c5597ac9fc99 390 SUPERFAMILY SSF103473 2 386 4.19E-69 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE1425 e87ee497135c3d319716c5597ac9fc99 390 PANTHER PTHR23502 1 382 7.8E-214 T 22-04-2016 YE1425 e87ee497135c3d319716c5597ac9fc99 390 Gene3D G3DSA:1.20.1250.20 199 384 4.5E-12 T 22-04-2016 YE1818 a8116633587f686af3c3fb7141acf2bb 334 PANTHER PTHR33055 3 332 7.8E-124 T 22-04-2016 YE1818 a8116633587f686af3c3fb7141acf2bb 334 PANTHER PTHR33055:SF2 3 332 7.8E-124 T 22-04-2016 YE1818 a8116633587f686af3c3fb7141acf2bb 334 Pfam PF02371 Transposase IS116/IS110/IS902 family 210 288 7.2E-21 T 22-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 YE1818 a8116633587f686af3c3fb7141acf2bb 334 Pfam PF01548 Transposase 7 146 1.5E-17 T 22-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 YE2324 39e82acae8c3eb1b89e2f21ed63948b1 462 Pfam PF13264 Domain of unknown function (DUF4055) 248 387 2.2E-41 T 22-04-2016 IPR025129 Domain of unknown function DUF4055 YE2223 ca21aaddd979595ee961c9a016d43f8a 98 SUPERFAMILY SSF54909 1 98 2.95E-31 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel YE2223 ca21aaddd979595ee961c9a016d43f8a 98 Pfam PF03795 YCII-related domain 1 94 3.5E-28 T 22-04-2016 IPR005545 YCII-related YE2223 ca21aaddd979595ee961c9a016d43f8a 98 PANTHER PTHR33606 1 98 6.8E-35 T 22-04-2016 YE2223 ca21aaddd979595ee961c9a016d43f8a 98 Gene3D G3DSA:3.30.70.1060 1 98 9.0E-38 T 22-04-2016 YE3325 043d9993a928fa9a5b28da17f218f3b3 339 Pfam PF01548 Transposase 6 146 1.8E-15 T 22-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 YE3325 043d9993a928fa9a5b28da17f218f3b3 339 PANTHER PTHR33055 2 334 6.0E-137 T 22-04-2016 YE3325 043d9993a928fa9a5b28da17f218f3b3 339 PANTHER PTHR33055:SF2 2 334 6.0E-137 T 22-04-2016 YE3325 043d9993a928fa9a5b28da17f218f3b3 339 Pfam PF02371 Transposase IS116/IS110/IS902 family 211 287 1.1E-25 T 22-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 YE1529 043d9993a928fa9a5b28da17f218f3b3 339 Pfam PF01548 Transposase 6 146 1.8E-15 T 22-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 YE1529 043d9993a928fa9a5b28da17f218f3b3 339 PANTHER PTHR33055 2 334 6.0E-137 T 22-04-2016 YE1529 043d9993a928fa9a5b28da17f218f3b3 339 PANTHER PTHR33055:SF2 2 334 6.0E-137 T 22-04-2016 YE1529 043d9993a928fa9a5b28da17f218f3b3 339 Pfam PF02371 Transposase IS116/IS110/IS902 family 211 287 1.1E-25 T 22-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 YE3847 e276643a0bbe6e4fdfb5e0ff719cba6a 397 PRINTS PR00799 Aspartate aminotransferase signature 176 195 2.2E-36 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 YE3847 e276643a0bbe6e4fdfb5e0ff719cba6a 397 PRINTS PR00799 Aspartate aminotransferase signature 342 360 2.2E-36 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 YE3847 e276643a0bbe6e4fdfb5e0ff719cba6a 397 PRINTS PR00799 Aspartate aminotransferase signature 274 299 2.2E-36 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 YE3847 e276643a0bbe6e4fdfb5e0ff719cba6a 397 PRINTS PR00799 Aspartate aminotransferase signature 207 219 2.2E-36 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 YE3847 e276643a0bbe6e4fdfb5e0ff719cba6a 397 Gene3D G3DSA:3.40.640.10 46 316 9.9E-105 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YE3847 e276643a0bbe6e4fdfb5e0ff719cba6a 397 PANTHER PTHR11879 1 396 0.0 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 YE3847 e276643a0bbe6e4fdfb5e0ff719cba6a 397 Pfam PF00155 Aminotransferase class I and II 27 392 3.3E-80 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YE3847 e276643a0bbe6e4fdfb5e0ff719cba6a 397 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 244 257 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 YE3847 e276643a0bbe6e4fdfb5e0ff719cba6a 397 PANTHER PTHR11879:SF7 1 396 0.0 T 22-04-2016 YE3847 e276643a0bbe6e4fdfb5e0ff719cba6a 397 SUPERFAMILY SSF53383 1 392 6.04E-116 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YE1585 48c1e54af1e7bea6d6043eab9eb072df 150 PANTHER PTHR31503 1 150 3.5E-62 T 22-04-2016 YE1585 48c1e54af1e7bea6d6043eab9eb072df 150 PIRSF PIRSF028777 1 139 3.0E-55 T 22-04-2016 IPR031308 Uncharacterised conserved protein UCP028777 YE1585 48c1e54af1e7bea6d6043eab9eb072df 150 Pfam PF03733 Inner membrane component domain 77 127 1.5E-18 T 22-04-2016 IPR005185 Inner membrane component domain YE1585 48c1e54af1e7bea6d6043eab9eb072df 150 Pfam PF03733 Inner membrane component domain 4 53 1.5E-9 T 22-04-2016 IPR005185 Inner membrane component domain YE2698 b281f5d20b4ffcd2f6c60e8055050230 341 PANTHER PTHR35564:SF1 6 341 4.8E-216 T 22-04-2016 YE2698 b281f5d20b4ffcd2f6c60e8055050230 341 PANTHER PTHR35564 6 341 4.8E-216 T 22-04-2016 YE2698 b281f5d20b4ffcd2f6c60e8055050230 341 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 23 321 2.5E-94 T 22-04-2016 IPR010732 Type VI secretion, TssG-like YE2698 b281f5d20b4ffcd2f6c60e8055050230 341 Pfam PF06996 Type VI secretion, VasB, ImpH, VC_A0111 23 320 1.7E-84 T 22-04-2016 IPR010732 Type VI secretion, TssG-like YE1455 0e04ebee6f0a10a3c3b1e85e11796a68 281 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 3 276 6.6E-107 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 YE1455 0e04ebee6f0a10a3c3b1e85e11796a68 281 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 175 182 - T 22-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 YE1455 0e04ebee6f0a10a3c3b1e85e11796a68 281 Pfam PF01261 Xylose isomerase-like TIM barrel 20 239 2.6E-41 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YE1455 0e04ebee6f0a10a3c3b1e85e11796a68 281 Hamap MF_00152 Probable endonuclease 4 [nfo]. 2 279 42.992 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 YE1455 0e04ebee6f0a10a3c3b1e85e11796a68 281 PANTHER PTHR21445 1 280 6.2E-152 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 YE1455 0e04ebee6f0a10a3c3b1e85e11796a68 281 SUPERFAMILY SSF51658 1 278 6.94E-100 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YE1455 0e04ebee6f0a10a3c3b1e85e11796a68 281 SMART SM00518 3 279 2.3E-129 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 YE1455 0e04ebee6f0a10a3c3b1e85e11796a68 281 PANTHER PTHR21445:SF0 1 280 6.2E-152 T 22-04-2016 YE1455 0e04ebee6f0a10a3c3b1e85e11796a68 281 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 69 77 - T 22-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 YE1455 0e04ebee6f0a10a3c3b1e85e11796a68 281 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 215 231 - T 22-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 YE1455 0e04ebee6f0a10a3c3b1e85e11796a68 281 Gene3D G3DSA:3.20.20.150 1 278 1.0E-115 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain YE3830 f718b9f87b07bc666d76414986ec723d 272 PANTHER PTHR32552 1 265 6.6E-73 T 22-04-2016 YE3830 f718b9f87b07bc666d76414986ec723d 272 Pfam PF13276 HTH-like domain 28 81 2.4E-19 T 22-04-2016 IPR025948 HTH-like domain YE3830 f718b9f87b07bc666d76414986ec723d 272 SUPERFAMILY SSF53098 100 258 6.83E-30 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE3830 f718b9f87b07bc666d76414986ec723d 272 Gene3D G3DSA:3.30.420.10 98 256 6.0E-27 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE3830 f718b9f87b07bc666d76414986ec723d 272 Pfam PF13333 Integrase core domain 209 263 2.5E-24 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YE3250 f718b9f87b07bc666d76414986ec723d 272 PANTHER PTHR32552 1 265 6.6E-73 T 22-04-2016 YE3250 f718b9f87b07bc666d76414986ec723d 272 Pfam PF13276 HTH-like domain 28 81 2.4E-19 T 22-04-2016 IPR025948 HTH-like domain YE3250 f718b9f87b07bc666d76414986ec723d 272 SUPERFAMILY SSF53098 100 258 6.83E-30 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE3250 f718b9f87b07bc666d76414986ec723d 272 Gene3D G3DSA:3.30.420.10 98 256 6.0E-27 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE3250 f718b9f87b07bc666d76414986ec723d 272 Pfam PF13333 Integrase core domain 209 263 2.5E-24 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YE0432 f8d24971a3bb8e32565e46c33a808b97 150 PANTHER PTHR33867:SF1 1 150 7.9E-59 T 22-04-2016 YE0432 f8d24971a3bb8e32565e46c33a808b97 150 PANTHER PTHR33867 1 150 7.9E-59 T 22-04-2016 YE0432 f8d24971a3bb8e32565e46c33a808b97 150 Gene3D G3DSA:3.30.300.70 2 79 9.6E-33 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal YE0432 f8d24971a3bb8e32565e46c33a808b97 150 Gene3D G3DSA:2.30.30.180 87 147 1.2E-12 T 22-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal YE0432 f8d24971a3bb8e32565e46c33a808b97 150 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 150 23.911 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 YE0432 f8d24971a3bb8e32565e46c33a808b97 150 SUPERFAMILY SSF74942 83 150 1.22E-16 T 22-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal YE0432 f8d24971a3bb8e32565e46c33a808b97 150 Pfam PF02576 Putative ribosome maturation factor RimP 11 146 2.2E-48 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 YE0432 f8d24971a3bb8e32565e46c33a808b97 150 SUPERFAMILY SSF75420 3 82 2.35E-24 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal YE1606 fbd08cf733d5922d9c0506309b57aa2e 845 Gene3D G3DSA:3.90.550.10 264 391 2.7E-4 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YE1606 fbd08cf733d5922d9c0506309b57aa2e 845 PANTHER PTHR10587 151 420 3.1E-152 T 22-04-2016 YE1606 fbd08cf733d5922d9c0506309b57aa2e 845 SUPERFAMILY SSF53448 246 533 2.72E-27 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YE1606 fbd08cf733d5922d9c0506309b57aa2e 845 Pfam PF00535 Glycosyl transferase family 2 248 430 4.0E-22 T 22-04-2016 IPR001173 Glycosyltransferase 2-like YE1606 fbd08cf733d5922d9c0506309b57aa2e 845 Hamap MF_01072 Glucans biosynthesis glucosyltransferase H [mdoH]. 68 747 51.512 T 22-04-2016 IPR023725 Glucan biosynthesis glucosyltransferase H GO:0016758 UniPathway: UPA00637 YE1606 fbd08cf733d5922d9c0506309b57aa2e 845 PANTHER PTHR10587:SF63 151 420 3.1E-152 T 22-04-2016 YE1606 fbd08cf733d5922d9c0506309b57aa2e 845 PANTHER PTHR10587:SF63 469 744 3.1E-152 T 22-04-2016 YE1606 fbd08cf733d5922d9c0506309b57aa2e 845 PANTHER PTHR10587 469 744 3.1E-152 T 22-04-2016 YE1621 b91d9709b033f4bdba5b5ddee3f68e8a 194 SUPERFAMILY SSF46894 127 188 3.74E-14 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YE1621 b91d9709b033f4bdba5b5ddee3f68e8a 194 Pfam PF00196 Bacterial regulatory proteins, luxR family 133 183 4.7E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE1621 b91d9709b033f4bdba5b5ddee3f68e8a 194 SMART SM00421 130 187 8.8E-7 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE1621 b91d9709b033f4bdba5b5ddee3f68e8a 194 Gene3D G3DSA:1.10.10.10 132 185 3.8E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1864 9acffc82ce485096a09423e93b0b14c0 876 PANTHER PTHR30462 1 875 0.0 T 22-04-2016 YE1864 9acffc82ce485096a09423e93b0b14c0 876 Pfam PF02470 MlaD protein 163 220 6.2E-6 T 22-04-2016 IPR003399 Mce/MlaD YE1864 9acffc82ce485096a09423e93b0b14c0 876 Pfam PF02470 MlaD protein 747 806 3.0E-9 T 22-04-2016 IPR003399 Mce/MlaD YE1864 9acffc82ce485096a09423e93b0b14c0 876 Pfam PF02470 MlaD protein 634 722 1.1E-10 T 22-04-2016 IPR003399 Mce/MlaD YE1864 9acffc82ce485096a09423e93b0b14c0 876 Pfam PF02470 MlaD protein 46 137 1.4E-17 T 22-04-2016 IPR003399 Mce/MlaD YE1864 9acffc82ce485096a09423e93b0b14c0 876 Pfam PF02470 MlaD protein 280 348 1.2E-6 T 22-04-2016 IPR003399 Mce/MlaD YE1864 9acffc82ce485096a09423e93b0b14c0 876 PANTHER PTHR30462:SF0 1 875 0.0 T 22-04-2016 YE2765 e29fa0cb31d0a9a4a23c1f626b545ee2 299 SUPERFAMILY SSF53850 6 224 7.42E-70 T 22-04-2016 YE2765 e29fa0cb31d0a9a4a23c1f626b545ee2 299 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 204 298 8.0E-33 T 22-04-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 YE2765 e29fa0cb31d0a9a4a23c1f626b545ee2 299 Pfam PF01634 ATP phosphoribosyltransferase 54 219 1.8E-47 T 22-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 YE2765 e29fa0cb31d0a9a4a23c1f626b545ee2 299 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 7 197 8.4E-56 T 22-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 YE2765 e29fa0cb31d0a9a4a23c1f626b545ee2 299 SUPERFAMILY SSF54913 226 298 1.56E-21 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta YE2765 e29fa0cb31d0a9a4a23c1f626b545ee2 299 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 156 177 - T 22-04-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 YE2765 e29fa0cb31d0a9a4a23c1f626b545ee2 299 Pfam PF08029 HisG, C-terminal domain 223 296 3.3E-24 T 22-04-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 YE2765 e29fa0cb31d0a9a4a23c1f626b545ee2 299 Gene3D G3DSA:3.40.190.10 3 139 3.4E-52 T 22-04-2016 YE2765 e29fa0cb31d0a9a4a23c1f626b545ee2 299 PANTHER PTHR21403:SF0 3 299 1.2E-132 T 22-04-2016 YE2765 e29fa0cb31d0a9a4a23c1f626b545ee2 299 PANTHER PTHR21403 3 299 1.2E-132 T 22-04-2016 IPR001348 ATP phosphoribosyltransferase HisG GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 YE2765 e29fa0cb31d0a9a4a23c1f626b545ee2 299 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 6 299 35.266 T 22-04-2016 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 YE2765 e29fa0cb31d0a9a4a23c1f626b545ee2 299 Gene3D G3DSA:3.30.70.120 226 299 8.3E-31 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal YE0562 5b16bd6e49e998fdb6f749a80f861fe5 145 PIRSF PIRSF029225 2 131 2.0E-51 T 22-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE0562 5b16bd6e49e998fdb6f749a80f861fe5 145 SUPERFAMILY SSF102220 27 135 2.75E-35 T 22-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE0562 5b16bd6e49e998fdb6f749a80f861fe5 145 Gene3D G3DSA:3.40.50.10220 26 136 7.0E-42 T 22-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE0562 5b16bd6e49e998fdb6f749a80f861fe5 145 Pfam PF03603 DNA polymerase III psi subunit 3 127 6.0E-47 T 22-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE0562 5b16bd6e49e998fdb6f749a80f861fe5 145 ProDom PD032475 DNA POLYMERASE PSI SUBUNIT III TRANSFERASE NUCLEOTIDYLTRANSFERASE III 3D-STRUCTURE DNA-DIRECTED 34 125 2.0E-39 T 22-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 YE0904 74826a46087250122a226024cc598782 153 PANTHER PTHR31793 16 149 1.5E-31 T 22-04-2016 YE0904 74826a46087250122a226024cc598782 153 PANTHER PTHR31793:SF9 16 149 1.5E-31 T 22-04-2016 YE0904 74826a46087250122a226024cc598782 153 SUPERFAMILY SSF54637 24 145 2.83E-30 T 22-04-2016 IPR029069 HotDog domain YE0904 74826a46087250122a226024cc598782 153 Gene3D G3DSA:3.10.129.10 23 148 7.2E-37 T 22-04-2016 IPR029069 HotDog domain YE0904 74826a46087250122a226024cc598782 153 Pfam PF13279 Thioesterase-like superfamily 30 135 2.0E-13 T 22-04-2016 YE3094 6080cdb2084d65de9f75cd45960270d7 187 Pfam PF00156 Phosphoribosyl transferase domain 35 178 1.6E-15 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 YE3094 6080cdb2084d65de9f75cd45960270d7 187 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 15 184 38.624 T 22-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 YE3094 6080cdb2084d65de9f75cd45960270d7 187 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 15 183 1.6E-71 T 22-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 YE3094 6080cdb2084d65de9f75cd45960270d7 187 Gene3D G3DSA:3.40.50.2020 11 185 2.5E-70 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YE3094 6080cdb2084d65de9f75cd45960270d7 187 PANTHER PTHR32315 1 187 1.9E-88 T 22-04-2016 YE3094 6080cdb2084d65de9f75cd45960270d7 187 SUPERFAMILY SSF53271 18 184 5.54E-52 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YE3533 8ad77e026e0f4a474b9663b9c8bd1bad 83 SUPERFAMILY SSF47336 24 81 6.67E-9 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YE3533 8ad77e026e0f4a474b9663b9c8bd1bad 83 Gene3D G3DSA:1.10.1200.10 27 80 2.5E-8 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain YE3759 56e0d57ff0698193241be7ba97b14757 477 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 364 383 - T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 YE3759 56e0d57ff0698193241be7ba97b14757 477 Pfam PF04552 Sigma-54, DNA binding domain 317 475 3.1E-69 T 22-04-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding YE3759 56e0d57ff0698193241be7ba97b14757 477 Pfam PF04963 Sigma-54 factor, core binding domain 114 303 9.0E-61 T 22-04-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 YE3759 56e0d57ff0698193241be7ba97b14757 477 PANTHER PTHR32248:SF4 1 477 7.6E-191 T 22-04-2016 YE3759 56e0d57ff0698193241be7ba97b14757 477 PRINTS PR00045 Sigma-54 factor signature 392 403 7.3E-32 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 YE3759 56e0d57ff0698193241be7ba97b14757 477 PRINTS PR00045 Sigma-54 factor signature 450 468 7.3E-32 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 YE3759 56e0d57ff0698193241be7ba97b14757 477 PRINTS PR00045 Sigma-54 factor signature 376 388 7.3E-32 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 YE3759 56e0d57ff0698193241be7ba97b14757 477 PRINTS PR00045 Sigma-54 factor signature 186 203 7.3E-32 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 YE3759 56e0d57ff0698193241be7ba97b14757 477 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 474 6.1E-158 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 YE3759 56e0d57ff0698193241be7ba97b14757 477 PIRSF PIRSF000774 1 477 1.2E-147 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 YE3759 56e0d57ff0698193241be7ba97b14757 477 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 5 48 2.5E-15 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 YE3759 56e0d57ff0698193241be7ba97b14757 477 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 455 462 - T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 YE3759 56e0d57ff0698193241be7ba97b14757 477 PANTHER PTHR32248 1 477 7.6E-191 T 22-04-2016 YE2893 a8e2d04e9cb5d844526f8bbdde21ec9b 396 PANTHER PTHR30294:SF17 23 396 1.8E-238 T 22-04-2016 YE2893 a8e2d04e9cb5d844526f8bbdde21ec9b 396 Pfam PF12698 ABC-2 family transporter protein 49 388 5.7E-44 T 22-04-2016 YE2893 a8e2d04e9cb5d844526f8bbdde21ec9b 396 PANTHER PTHR30294 23 396 1.8E-238 T 22-04-2016 YE0445 4b74aa4c4a7098a4ba42d2ee9575176d 468 SUPERFAMILY SSF56954 2 462 3.27E-106 T 22-04-2016 YE0445 4b74aa4c4a7098a4ba42d2ee9575176d 468 PANTHER PTHR30203 1 462 3.6E-189 T 22-04-2016 YE0445 4b74aa4c4a7098a4ba42d2ee9575176d 468 Gene3D G3DSA:2.20.200.10 95 137 2.5E-19 T 22-04-2016 YE0445 4b74aa4c4a7098a4ba42d2ee9575176d 468 Gene3D G3DSA:2.20.200.10 311 346 2.5E-19 T 22-04-2016 YE0445 4b74aa4c4a7098a4ba42d2ee9575176d 468 PANTHER PTHR30203:SF15 1 462 3.6E-189 T 22-04-2016 YE0445 4b74aa4c4a7098a4ba42d2ee9575176d 468 Gene3D G3DSA:1.20.1600.10 47 85 1.3E-96 T 22-04-2016 YE0445 4b74aa4c4a7098a4ba42d2ee9575176d 468 Gene3D G3DSA:1.20.1600.10 348 461 1.3E-96 T 22-04-2016 YE0445 4b74aa4c4a7098a4ba42d2ee9575176d 468 Gene3D G3DSA:1.20.1600.10 138 310 1.3E-96 T 22-04-2016 YE0445 4b74aa4c4a7098a4ba42d2ee9575176d 468 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 10 461 7.1E-116 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 YE0445 4b74aa4c4a7098a4ba42d2ee9575176d 468 Pfam PF02321 Outer membrane efflux protein 280 459 3.9E-29 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 YE0445 4b74aa4c4a7098a4ba42d2ee9575176d 468 Pfam PF02321 Outer membrane efflux protein 60 250 8.6E-25 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 YE2756 689ed8cd3af80c8f0bd589dbe608d9c5 352 PANTHER PTHR30509 1 352 1.0E-154 T 22-04-2016 YE2756 689ed8cd3af80c8f0bd589dbe608d9c5 352 PANTHER PTHR30509:SF5 1 352 1.0E-154 T 22-04-2016 YE2756 689ed8cd3af80c8f0bd589dbe608d9c5 352 Pfam PF13515 Fusaric acid resistance protein-like 33 158 1.8E-14 T 22-04-2016 YE1056 66782d9d56271dad4baed78b29c0e8df 164 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 22-04-2016 IPR030489 Transcription regulator Rrf2-type, conserved site YE1056 66782d9d56271dad4baed78b29c0e8df 164 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 3.8E-67 T 22-04-2016 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 YE1056 66782d9d56271dad4baed78b29c0e8df 164 SUPERFAMILY SSF46785 2 133 9.79E-37 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1056 66782d9d56271dad4baed78b29c0e8df 164 PANTHER PTHR33221:SF1 2 152 4.0E-73 T 22-04-2016 YE1056 66782d9d56271dad4baed78b29c0e8df 164 Pfam PF02082 Transcriptional regulator 1 83 2.3E-27 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type YE1056 66782d9d56271dad4baed78b29c0e8df 164 Gene3D G3DSA:1.10.10.10 1 133 5.9E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1056 66782d9d56271dad4baed78b29c0e8df 164 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 2.7E-47 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type YE1056 66782d9d56271dad4baed78b29c0e8df 164 PANTHER PTHR33221 2 152 4.0E-73 T 22-04-2016 YE1056 66782d9d56271dad4baed78b29c0e8df 164 Hamap MF_01176 HTH-type transcriptional regulator IscR [iscR]. 1 164 52.162 T 22-04-2016 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 YE1868 814c0487dd6a1178ee27c7cbe6d75ccb 691 Gene3D G3DSA:3.30.750.44 196 251 5.6E-5 T 22-04-2016 YE1868 814c0487dd6a1178ee27c7cbe6d75ccb 691 PANTHER PTHR32060 2 604 0.0 T 22-04-2016 YE1868 814c0487dd6a1178ee27c7cbe6d75ccb 691 Gene3D G3DSA:2.30.42.10 252 334 1.5E-21 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YE1868 814c0487dd6a1178ee27c7cbe6d75ccb 691 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 534 667 1.8E-43 T 22-04-2016 IPR020992 Tail specific protease, C-terminal YE1868 814c0487dd6a1178ee27c7cbe6d75ccb 691 Gene3D G3DSA:3.90.226.10 335 533 1.5E-67 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YE1868 814c0487dd6a1178ee27c7cbe6d75ccb 691 Gene3D G3DSA:3.90.226.10 646 675 1.5E-67 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YE1868 814c0487dd6a1178ee27c7cbe6d75ccb 691 SUPERFAMILY SSF50156 216 347 1.04E-16 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YE1868 814c0487dd6a1178ee27c7cbe6d75ccb 691 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 197 551 4.2E-126 T 22-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 YE1868 814c0487dd6a1178ee27c7cbe6d75ccb 691 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 240 320 1.8E-14 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YE1868 814c0487dd6a1178ee27c7cbe6d75ccb 691 SMART SM00245 326 531 3.0E-81 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 YE1868 814c0487dd6a1178ee27c7cbe6d75ccb 691 SUPERFAMILY SSF52096 167 264 1.34E-69 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YE1868 814c0487dd6a1178ee27c7cbe6d75ccb 691 SUPERFAMILY SSF52096 350 535 1.34E-69 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YE1868 814c0487dd6a1178ee27c7cbe6d75ccb 691 PANTHER PTHR32060:SF11 2 604 0.0 T 22-04-2016 YE1868 814c0487dd6a1178ee27c7cbe6d75ccb 691 SMART SM00228 246 323 3.7E-10 T 22-04-2016 IPR001478 PDZ domain GO:0005515 YE1868 814c0487dd6a1178ee27c7cbe6d75ccb 691 Pfam PF03572 Peptidase family S41 356 529 5.5E-53 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 YE0574 b77b5742f7f72952595b2fcecff9e917 241 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 22-04-2016 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 YE0574 b77b5742f7f72952595b2fcecff9e917 241 PANTHER PTHR21234:SF8 3 234 7.1E-87 T 22-04-2016 YE0574 b77b5742f7f72952595b2fcecff9e917 241 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 52.639 T 22-04-2016 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 YE0574 b77b5742f7f72952595b2fcecff9e917 241 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 1.9E-123 T 22-04-2016 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 YE0574 b77b5742f7f72952595b2fcecff9e917 241 Gene3D G3DSA:3.40.50.1580 10 233 4.5E-85 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 YE0574 b77b5742f7f72952595b2fcecff9e917 241 SUPERFAMILY SSF53167 3 234 2.09E-94 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 YE0574 b77b5742f7f72952595b2fcecff9e917 241 Pfam PF01048 Phosphorylase superfamily 15 218 1.2E-41 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 YE0574 b77b5742f7f72952595b2fcecff9e917 241 PANTHER PTHR21234 3 234 7.1E-87 T 22-04-2016 IPR018017 Nucleoside phosphorylase YE4152 a4a39414e8bf158abba4f845f8e62b5f 190 SUPERFAMILY SSF48150 4 186 3.61E-81 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 YE4152 a4a39414e8bf158abba4f845f8e62b5f 190 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 4 183 6.7E-83 T 22-04-2016 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 YE4152 a4a39414e8bf158abba4f845f8e62b5f 190 PANTHER PTHR30037:SF4 3 186 1.4E-116 T 22-04-2016 YE4152 a4a39414e8bf158abba4f845f8e62b5f 190 Pfam PF03352 Methyladenine glycosylase 8 184 1.9E-79 T 22-04-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 YE4152 a4a39414e8bf158abba4f845f8e62b5f 190 Gene3D G3DSA:1.10.340.30 4 184 3.7E-85 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 YE4152 a4a39414e8bf158abba4f845f8e62b5f 190 PANTHER PTHR30037 3 186 1.4E-116 T 22-04-2016 YE3544 e1f37315394c309db9f43a3863e7403c 430 PANTHER PTHR15184 11 428 6.5E-161 T 22-04-2016 YE3544 e1f37315394c309db9f43a3863e7403c 430 SUPERFAMILY SSF52540 84 354 6.2E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3544 e1f37315394c309db9f43a3863e7403c 430 PANTHER PTHR15184:SF9 11 428 6.5E-161 T 22-04-2016 IPR032463 ATPase, type III secretion system, FliI GO:0016887|GO:0030257|GO:0044780 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YE3544 e1f37315394c309db9f43a3863e7403c 430 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 340 349 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YE3544 e1f37315394c309db9f43a3863e7403c 430 Gene3D G3DSA:3.40.50.300 83 351 3.5E-88 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3544 e1f37315394c309db9f43a3863e7403c 430 SMART SM00382 152 333 1.0E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain YE3544 e1f37315394c309db9f43a3863e7403c 430 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 140 349 3.0E-74 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YE3544 e1f37315394c309db9f43a3863e7403c 430 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 11 428 3.3E-129 T 22-04-2016 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 YE2313 ce0ab1c54a47594beca3ba805da8d94f 931 TIGRFAM TIGR01541 tape_meas_lam_C: phage tail tape measure protein, lambda family 548 874 1.2E-105 T 22-04-2016 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal YE2313 ce0ab1c54a47594beca3ba805da8d94f 931 Pfam PF09718 Lambda phage tail tape-measure protein (Tape_meas_lam_C) 684 759 1.4E-18 T 22-04-2016 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal YE2313 ce0ab1c54a47594beca3ba805da8d94f 931 Pfam PF06791 Prophage tail length tape measure protein 111 311 5.7E-67 T 22-04-2016 IPR009628 Bacteriophage lambda, GpH, tail tape measure, N-terminal YE2339 b29db4fd290e8ba1dbdaa172672f2400 148 Pfam PF05772 NinB protein 3 127 1.4E-52 T 22-04-2016 IPR008711 Recombinase NinB YE2339 b29db4fd290e8ba1dbdaa172672f2400 148 SUPERFAMILY SSF103370 1 140 4.58E-55 T 22-04-2016 IPR008711 Recombinase NinB YE2339 b29db4fd290e8ba1dbdaa172672f2400 148 Gene3D G3DSA:1.10.3790.10 2 143 2.5E-55 T 22-04-2016 IPR008711 Recombinase NinB YE1382 5acea53251c00033b31c6cd417d9cbef 402 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 7 383 2.5E-138 T 22-04-2016 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 YE1382 5acea53251c00033b31c6cd417d9cbef 402 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 17 33 - T 22-04-2016 IPR013061 Tryptophan/tryrosine permease, conserved site YE1382 5acea53251c00033b31c6cd417d9cbef 402 PANTHER PTHR32195 1 398 1.8E-221 T 22-04-2016 YE1382 5acea53251c00033b31c6cd417d9cbef 402 PRINTS PR00166 Aromatic amino acid permease signature 148 168 3.6E-90 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YE1382 5acea53251c00033b31c6cd417d9cbef 402 PRINTS PR00166 Aromatic amino acid permease signature 221 240 3.6E-90 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YE1382 5acea53251c00033b31c6cd417d9cbef 402 PRINTS PR00166 Aromatic amino acid permease signature 316 334 3.6E-90 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YE1382 5acea53251c00033b31c6cd417d9cbef 402 PRINTS PR00166 Aromatic amino acid permease signature 82 102 3.6E-90 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YE1382 5acea53251c00033b31c6cd417d9cbef 402 PRINTS PR00166 Aromatic amino acid permease signature 282 301 3.6E-90 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YE1382 5acea53251c00033b31c6cd417d9cbef 402 PRINTS PR00166 Aromatic amino acid permease signature 337 356 3.6E-90 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YE1382 5acea53251c00033b31c6cd417d9cbef 402 PRINTS PR00166 Aromatic amino acid permease signature 10 33 3.6E-90 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YE1382 5acea53251c00033b31c6cd417d9cbef 402 PRINTS PR00166 Aromatic amino acid permease signature 182 204 3.6E-90 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YE1382 5acea53251c00033b31c6cd417d9cbef 402 PRINTS PR00166 Aromatic amino acid permease signature 37 56 3.6E-90 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 YE1382 5acea53251c00033b31c6cd417d9cbef 402 PANTHER PTHR32195:SF17 1 398 1.8E-221 T 22-04-2016 YE1382 5acea53251c00033b31c6cd417d9cbef 402 Pfam PF03222 Tryptophan/tyrosine permease family 3 389 3.9E-136 T 22-04-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 YE3300 0f5ca79a93d2136454d4e3b06a76a625 305 PANTHER PTHR30537 1 305 1.1E-159 T 22-04-2016 YE3300 0f5ca79a93d2136454d4e3b06a76a625 305 Pfam PF03466 LysR substrate binding domain 91 292 4.5E-39 T 22-04-2016 IPR005119 LysR, substrate-binding YE3300 0f5ca79a93d2136454d4e3b06a76a625 305 PANTHER PTHR30537:SF26 1 305 1.1E-159 T 22-04-2016 YE3300 0f5ca79a93d2136454d4e3b06a76a625 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 2.9E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE3300 0f5ca79a93d2136454d4e3b06a76a625 305 Gene3D G3DSA:3.40.190.10 94 179 3.3E-34 T 22-04-2016 YE3300 0f5ca79a93d2136454d4e3b06a76a625 305 SUPERFAMILY SSF53850 93 296 2.33E-40 T 22-04-2016 YE3300 0f5ca79a93d2136454d4e3b06a76a625 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.2E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE3300 0f5ca79a93d2136454d4e3b06a76a625 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.2E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE3300 0f5ca79a93d2136454d4e3b06a76a625 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.2E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE3300 0f5ca79a93d2136454d4e3b06a76a625 305 SUPERFAMILY SSF46785 3 87 5.94E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3300 0f5ca79a93d2136454d4e3b06a76a625 305 Gene3D G3DSA:1.10.10.10 2 88 1.2E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3300 0f5ca79a93d2136454d4e3b06a76a625 305 Gene3D G3DSA:3.40.190.10 180 258 2.5E-16 T 22-04-2016 YE3511 097858ba577b994476776f039dbfbb45 400 Pfam PF13730 Helix-turn-helix domain 56 116 9.1E-10 T 22-04-2016 YE0553 5d30db42095c031dad5be5649f6d2a87 512 Pfam PF11471 Maltoporin periplasmic N-terminal extension 3 58 1.2E-16 T 22-04-2016 IPR021570 LamB-type porin N-terminal domain YE0553 5d30db42095c031dad5be5649f6d2a87 512 SUPERFAMILY SSF57997 27 92 3.6E-5 T 22-04-2016 YE0553 5d30db42095c031dad5be5649f6d2a87 512 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 104 508 0.0 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 YE0553 5d30db42095c031dad5be5649f6d2a87 512 Pfam PF02264 LamB porin 100 512 7.4E-108 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 YE0553 5d30db42095c031dad5be5649f6d2a87 512 PANTHER PTHR38762 97 512 2.0E-22 T 22-04-2016 YE0553 5d30db42095c031dad5be5649f6d2a87 512 Gene3D G3DSA:2.40.170.10 97 512 7.5E-151 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 YE0553 5d30db42095c031dad5be5649f6d2a87 512 SUPERFAMILY SSF56935 97 512 4.27E-131 T 22-04-2016 YE1038 366f10e8dd50cda9a9cf3449daefd585 540 PANTHER PTHR23090 2 535 7.9E-196 T 22-04-2016 YE1038 366f10e8dd50cda9a9cf3449daefd585 540 Gene3D G3DSA:3.60.110.10 3 242 4.5E-61 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 YE1038 366f10e8dd50cda9a9cf3449daefd585 540 ProSitePatterns PS00920 Nitrilases / cyanide hydratase signature 1. 37 52 - T 22-04-2016 IPR000132 Nitrilase/cyanide hydratase, conserved site GO:0016810 YE1038 366f10e8dd50cda9a9cf3449daefd585 540 TIGRFAM TIGR00552 nadE: NAD+ synthetase 265 511 4.3E-58 T 22-04-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 YE1038 366f10e8dd50cda9a9cf3449daefd585 540 Pfam PF00795 Carbon-nitrogen hydrolase 7 239 2.5E-26 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 YE1038 366f10e8dd50cda9a9cf3449daefd585 540 SUPERFAMILY SSF52402 258 520 1.26E-77 T 22-04-2016 YE1038 366f10e8dd50cda9a9cf3449daefd585 540 SUPERFAMILY SSF56317 3 241 2.22E-61 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 YE1038 366f10e8dd50cda9a9cf3449daefd585 540 Gene3D G3DSA:3.40.50.620 259 518 2.0E-75 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YE1038 366f10e8dd50cda9a9cf3449daefd585 540 Pfam PF02540 NAD synthase 264 511 2.9E-71 T 22-04-2016 IPR022310 NAD/GMP synthase YE0277 250413003fee0c4e4e0a03ef0ad87c5b 183 Gene3D G3DSA:3.40.630.30 18 171 3.0E-28 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE0277 250413003fee0c4e4e0a03ef0ad87c5b 183 Pfam PF13673 Acetyltransferase (GNAT) domain 40 149 7.1E-12 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YE0277 250413003fee0c4e4e0a03ef0ad87c5b 183 SUPERFAMILY SSF55729 2 171 1.24E-21 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE0277 250413003fee0c4e4e0a03ef0ad87c5b 183 PANTHER PTHR13947 62 178 3.6E-14 T 22-04-2016 YE2565 46c98e88bfc6150946087af682600f92 140 Pfam PF06366 Flagellar protein FlhE 35 140 5.2E-37 T 22-04-2016 IPR009420 Flagellar protein FlhE YE2346 e588468805d6c8adda6c609218a58375 299 Pfam PF04492 Bacteriophage replication protein O 19 131 1.6E-14 T 22-04-2016 IPR006497 Bacteriophage lambda, GpO, N-terminal GO:0006260 YE0349 a7a473e9153e109aa1e88e064b42f548 100 Gene3D G3DSA:3.30.70.830 1 98 5.4E-38 T 22-04-2016 YE0349 a7a473e9153e109aa1e88e064b42f548 100 SUPERFAMILY SSF54913 1 98 1.3E-33 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta YE0349 a7a473e9153e109aa1e88e064b42f548 100 Pfam PF03091 CutA1 divalent ion tolerance protein 1 97 3.2E-33 T 22-04-2016 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 YE0349 a7a473e9153e109aa1e88e064b42f548 100 PANTHER PTHR23419 1 100 9.3E-44 T 22-04-2016 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 YE1320 302fd846396a2a1f95f74a01ceab3e7e 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 40 219 3.2E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE1320 302fd846396a2a1f95f74a01ceab3e7e 238 PANTHER PTHR30450 1 237 3.2E-194 T 22-04-2016 YE1320 302fd846396a2a1f95f74a01ceab3e7e 238 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 21 122 7.7E-14 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 YE1320 302fd846396a2a1f95f74a01ceab3e7e 238 PANTHER PTHR30450:SF5 1 237 3.2E-194 T 22-04-2016 YE1320 302fd846396a2a1f95f74a01ceab3e7e 238 Gene3D G3DSA:1.10.3720.10 18 228 5.7E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE1320 302fd846396a2a1f95f74a01ceab3e7e 238 SUPERFAMILY SSF161098 17 214 1.57E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE1429 d01a4309cf4db6061c4411f865dcdbb7 366 PANTHER PTHR30465:SF66 71 362 1.2E-225 T 22-04-2016 YE1429 d01a4309cf4db6061c4411f865dcdbb7 366 PANTHER PTHR30465 2 45 1.2E-225 T 22-04-2016 YE1429 d01a4309cf4db6061c4411f865dcdbb7 366 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 153 360 4.0E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE1429 d01a4309cf4db6061c4411f865dcdbb7 366 SUPERFAMILY SSF161098 130 347 6.41E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE1429 d01a4309cf4db6061c4411f865dcdbb7 366 Gene3D G3DSA:1.10.3720.10 131 352 1.0E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE1429 d01a4309cf4db6061c4411f865dcdbb7 366 PANTHER PTHR30465:SF66 2 45 1.2E-225 T 22-04-2016 YE1429 d01a4309cf4db6061c4411f865dcdbb7 366 PANTHER PTHR30465 71 362 1.2E-225 T 22-04-2016 YE3142 65a7bd5e81c391b419eceba50e01df0a 663 PANTHER PTHR10422:SF26 33 614 0.0 T 22-04-2016 YE3142 65a7bd5e81c391b419eceba50e01df0a 663 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 2 647 0.0 T 22-04-2016 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 YE3142 65a7bd5e81c391b419eceba50e01df0a 663 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 280 334 - T 22-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 YE3142 65a7bd5e81c391b419eceba50e01df0a 663 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 56 503 6.0E-136 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 YE3142 65a7bd5e81c391b419eceba50e01df0a 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 461 482 7.5E-96 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 YE3142 65a7bd5e81c391b419eceba50e01df0a 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 278 299 7.5E-96 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 YE3142 65a7bd5e81c391b419eceba50e01df0a 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 411 430 7.5E-96 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 YE3142 65a7bd5e81c391b419eceba50e01df0a 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 348 369 7.5E-96 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 YE3142 65a7bd5e81c391b419eceba50e01df0a 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 166 178 7.5E-96 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 YE3142 65a7bd5e81c391b419eceba50e01df0a 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 198 216 7.5E-96 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 YE3142 65a7bd5e81c391b419eceba50e01df0a 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 7.5E-96 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 YE3142 65a7bd5e81c391b419eceba50e01df0a 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 383 401 7.5E-96 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 YE3142 65a7bd5e81c391b419eceba50e01df0a 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 324 339 7.5E-96 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 YE3142 65a7bd5e81c391b419eceba50e01df0a 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 227 246 7.5E-96 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 YE3142 65a7bd5e81c391b419eceba50e01df0a 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 124 148 7.5E-96 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 YE3142 65a7bd5e81c391b419eceba50e01df0a 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 120 7.5E-96 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 YE3142 65a7bd5e81c391b419eceba50e01df0a 663 Gene3D G3DSA:1.20.210.10 40 589 1.4E-188 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 YE3142 65a7bd5e81c391b419eceba50e01df0a 663 SUPERFAMILY SSF81442 43 560 1.83E-179 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 YE3142 65a7bd5e81c391b419eceba50e01df0a 663 PANTHER PTHR10422 33 614 0.0 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 YE0620 f0a6b58f535d3084ccc873d5e955df9c 273 Gene3D G3DSA:3.40.50.720 4 167 4.8E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain YE0620 f0a6b58f535d3084ccc873d5e955df9c 273 PIRSF PIRSF000161 4 272 5.7E-89 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YE0620 f0a6b58f535d3084ccc873d5e955df9c 273 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 132 268 1.1E-41 T 22-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YE0620 f0a6b58f535d3084ccc873d5e955df9c 273 PANTHER PTHR20836 3 273 4.3E-103 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YE0620 f0a6b58f535d3084ccc873d5e955df9c 273 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 6 129 2.7E-42 T 22-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YE0620 f0a6b58f535d3084ccc873d5e955df9c 273 SUPERFAMILY SSF55347 131 240 8.28E-37 T 22-04-2016 YE0620 f0a6b58f535d3084ccc873d5e955df9c 273 PANTHER PTHR20836:SF0 3 273 4.3E-103 T 22-04-2016 YE0620 f0a6b58f535d3084ccc873d5e955df9c 273 SUPERFAMILY SSF51735 4 130 2.3E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain YE0620 f0a6b58f535d3084ccc873d5e955df9c 273 SUPERFAMILY SSF51735 240 272 2.3E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain YE0620 f0a6b58f535d3084ccc873d5e955df9c 273 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 154 171 - T 22-04-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YE0620 f0a6b58f535d3084ccc873d5e955df9c 273 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 6 269 34.471 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YE0620 f0a6b58f535d3084ccc873d5e955df9c 273 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 5 268 7.2E-105 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 YE2658 1c05aa19893a889d90fa2377c8801859 443 Pfam PF07690 Major Facilitator Superfamily 37 397 3.0E-51 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YE2658 1c05aa19893a889d90fa2377c8801859 443 PANTHER PTHR11662:SF286 14 432 1.1E-169 T 22-04-2016 YE2658 1c05aa19893a889d90fa2377c8801859 443 Gene3D G3DSA:1.20.1250.20 244 432 4.3E-37 T 22-04-2016 YE2658 1c05aa19893a889d90fa2377c8801859 443 Gene3D G3DSA:1.20.1250.20 20 212 2.3E-52 T 22-04-2016 YE2658 1c05aa19893a889d90fa2377c8801859 443 SUPERFAMILY SSF103473 13 431 3.79E-77 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE2658 1c05aa19893a889d90fa2377c8801859 443 PIRSF PIRSF002808 8 443 2.2E-128 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 YE2658 1c05aa19893a889d90fa2377c8801859 443 PANTHER PTHR11662 14 432 1.1E-169 T 22-04-2016 YE1788 0a8a43fa68f5481962a747fad4947ce3 119 ProDom PD077599 YEBF LIPOPROTEIN EXPORTED PERIPLASMIC PRECURSOR SIGNAL SIMILAR PALMITATE MEMBRANE ESCHERICHIA 26 115 1.0E-39 T 22-04-2016 IPR025603 YebF/Colicin-M immunity protein YE1788 0a8a43fa68f5481962a747fad4947ce3 119 Pfam PF13995 YebF-like protein 28 115 4.6E-39 T 22-04-2016 IPR025603 YebF/Colicin-M immunity protein YE4075 1222c57914179abd09d84691442270e7 245 TIGRFAM TIGR03371 cellulose_yhjQ: cellulose synthase operon protein YhjQ 1 239 1.9E-82 T 22-04-2016 IPR017746 Cellulose synthase operon protein BcsQ YE4075 1222c57914179abd09d84691442270e7 245 Pfam PF06564 Cellulose biosynthesis protein BcsQ 1 237 2.4E-110 T 22-04-2016 IPR017746 Cellulose synthase operon protein BcsQ YE4075 1222c57914179abd09d84691442270e7 245 SUPERFAMILY SSF52540 1 236 3.38E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE4075 1222c57914179abd09d84691442270e7 245 Gene3D G3DSA:3.40.50.300 1 237 2.6E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE4075 1222c57914179abd09d84691442270e7 245 PANTHER PTHR13696 1 235 7.0E-16 T 22-04-2016 YE1026 42b975340647754e1bd6318fbd75db14 240 Gene3D G3DSA:1.10.10.10 178 235 4.8E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1026 42b975340647754e1bd6318fbd75db14 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 205 217 6.9E-6 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE1026 42b975340647754e1bd6318fbd75db14 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 189 6.9E-6 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE1026 42b975340647754e1bd6318fbd75db14 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 189 205 6.9E-6 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE1026 42b975340647754e1bd6318fbd75db14 240 Pfam PF00196 Bacterial regulatory proteins, luxR family 174 229 8.8E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE1026 42b975340647754e1bd6318fbd75db14 240 SMART SM00421 172 229 1.2E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE1026 42b975340647754e1bd6318fbd75db14 240 Pfam PF03472 Autoinducer binding domain 29 153 2.7E-19 T 22-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain YE1026 42b975340647754e1bd6318fbd75db14 240 Gene3D G3DSA:3.30.450.80 12 177 9.7E-30 T 22-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain YE1026 42b975340647754e1bd6318fbd75db14 240 SUPERFAMILY SSF75516 14 157 1.06E-31 T 22-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain YE1026 42b975340647754e1bd6318fbd75db14 240 SUPERFAMILY SSF46894 170 235 2.14E-13 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YE1823 29e192d1a1c4f5206a0924bbeca496a4 261 SUPERFAMILY SSF53098 111 246 8.22E-34 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE1823 29e192d1a1c4f5206a0924bbeca496a4 261 Pfam PF13276 HTH-like domain 48 102 1.0E-9 T 22-04-2016 IPR025948 HTH-like domain YE1823 29e192d1a1c4f5206a0924bbeca496a4 261 PANTHER PTHR32552 47 248 9.3E-97 T 22-04-2016 YE1823 29e192d1a1c4f5206a0924bbeca496a4 261 Pfam PF00665 Integrase core domain 119 230 1.2E-25 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YE1823 29e192d1a1c4f5206a0924bbeca496a4 261 Gene3D G3DSA:3.30.420.10 112 246 1.4E-35 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE1823 29e192d1a1c4f5206a0924bbeca496a4 261 PANTHER PTHR32552:SF26 47 248 9.3E-97 T 22-04-2016 YE3805 848518961cfbdb5db3798bf3ff69c37b 347 Gene3D G3DSA:3.30.420.40 164 190 2.1E-35 T 22-04-2016 YE3805 848518961cfbdb5db3798bf3ff69c37b 347 Gene3D G3DSA:3.30.420.40 267 321 2.1E-35 T 22-04-2016 YE3805 848518961cfbdb5db3798bf3ff69c37b 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 9.1E-170 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 YE3805 848518961cfbdb5db3798bf3ff69c37b 347 SUPERFAMILY SSF53067 9 152 8.89E-38 T 22-04-2016 YE3805 848518961cfbdb5db3798bf3ff69c37b 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 1.2E-65 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 YE3805 848518961cfbdb5db3798bf3ff69c37b 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 1.2E-65 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 YE3805 848518961cfbdb5db3798bf3ff69c37b 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 1.2E-65 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 YE3805 848518961cfbdb5db3798bf3ff69c37b 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 1.2E-65 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 YE3805 848518961cfbdb5db3798bf3ff69c37b 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 1.2E-65 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 YE3805 848518961cfbdb5db3798bf3ff69c37b 347 PANTHER PTHR19375 9 336 1.5E-190 T 22-04-2016 YE3805 848518961cfbdb5db3798bf3ff69c37b 347 Pfam PF06723 MreB/Mbl protein 11 338 9.6E-150 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 YE3805 848518961cfbdb5db3798bf3ff69c37b 347 Gene3D G3DSA:3.90.640.10 191 263 6.8E-30 T 22-04-2016 YE3805 848518961cfbdb5db3798bf3ff69c37b 347 PANTHER PTHR19375:SF117 9 336 1.5E-190 T 22-04-2016 YE3805 848518961cfbdb5db3798bf3ff69c37b 347 Gene3D G3DSA:3.30.420.40 9 163 1.8E-46 T 22-04-2016 YE3805 848518961cfbdb5db3798bf3ff69c37b 347 SUPERFAMILY SSF53067 153 340 4.08E-50 T 22-04-2016 YE3501 0241ca88d0b03b25e07642725778e2b8 369 Pfam PF00482 Type II secretion system (T2SS), protein F 238 359 2.9E-13 T 22-04-2016 IPR018076 Type II secretion system F domain YE3501 0241ca88d0b03b25e07642725778e2b8 369 Pfam PF00482 Type II secretion system (T2SS), protein F 35 163 1.5E-12 T 22-04-2016 IPR018076 Type II secretion system F domain YE2560 cc455c5d1ff1eba6cee4cf1af4260bfe 137 PIRSF PIRSF002889 1 137 6.4E-42 T 22-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 YE2560 cc455c5d1ff1eba6cee4cf1af4260bfe 137 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site YE2560 cc455c5d1ff1eba6cee4cf1af4260bfe 137 PANTHER PTHR30435:SF12 2 135 2.7E-55 T 22-04-2016 YE2560 cc455c5d1ff1eba6cee4cf1af4260bfe 137 PANTHER PTHR30435 2 135 2.7E-55 T 22-04-2016 YE2560 cc455c5d1ff1eba6cee4cf1af4260bfe 137 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 6 135 1.4E-42 T 22-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 YE2560 cc455c5d1ff1eba6cee4cf1af4260bfe 137 Pfam PF00460 Flagella basal body rod protein 9 39 3.0E-12 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 YE2495 5bba24cb897554a9d89be4eed518438c 467 Pfam PF10080 Predicted membrane protein (DUF2318) 297 400 4.1E-29 T 22-04-2016 IPR018758 Domain of unknown function DUF2318, membrane YE2495 5bba24cb897554a9d89be4eed518438c 467 Pfam PF04945 YHS domain 408 454 1.7E-17 T 22-04-2016 IPR007029 YHS domain YE3947 ec925398ad490f77b33ee6d0cdc834ad 255 PANTHER PTHR24220:SF564 3 205 6.6E-146 T 22-04-2016 YE3947 ec925398ad490f77b33ee6d0cdc834ad 255 PANTHER PTHR24220 3 205 6.6E-146 T 22-04-2016 YE3947 ec925398ad490f77b33ee6d0cdc834ad 255 SMART SM00382 26 215 1.6E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain YE3947 ec925398ad490f77b33ee6d0cdc834ad 255 Gene3D G3DSA:3.40.50.300 1 213 2.3E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3947 ec925398ad490f77b33ee6d0cdc834ad 255 SUPERFAMILY SSF52540 1 213 9.22E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3947 ec925398ad490f77b33ee6d0cdc834ad 255 Pfam PF00005 ABC transporter 17 156 5.9E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE3947 ec925398ad490f77b33ee6d0cdc834ad 255 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE4020 00c5b109b5722ff90d789d0b74771905 170 PRINTS PR01100 Shikimate kinase family signature 100 117 2.5E-5 T 22-04-2016 YE4020 00c5b109b5722ff90d789d0b74771905 170 PRINTS PR01100 Shikimate kinase family signature 6 21 2.5E-5 T 22-04-2016 YE4020 00c5b109b5722ff90d789d0b74771905 170 SUPERFAMILY SSF52540 2 166 1.48E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE4020 00c5b109b5722ff90d789d0b74771905 170 Gene3D G3DSA:3.40.50.300 3 167 1.4E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE4020 00c5b109b5722ff90d789d0b74771905 170 Pfam PF01202 Shikimate kinase 12 166 4.8E-15 T 22-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 YE4020 00c5b109b5722ff90d789d0b74771905 170 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 6 164 1.0E-68 T 22-04-2016 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530|UniPathway: UPA00792 YE4020 00c5b109b5722ff90d789d0b74771905 170 PANTHER PTHR11603 1 169 2.3E-87 T 22-04-2016 YE1088 7a2d00ce1c19fd0d8aabced32871daef 266 SUPERFAMILY SSF53613 5 266 3.74E-78 T 22-04-2016 IPR029056 Ribokinase-like YE1088 7a2d00ce1c19fd0d8aabced32871daef 266 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 6 262 1.6E-102 T 22-04-2016 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 YE1088 7a2d00ce1c19fd0d8aabced32871daef 266 Pfam PF08543 Phosphomethylpyrimidine kinase 13 260 5.9E-93 T 22-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 YE1088 7a2d00ce1c19fd0d8aabced32871daef 266 PANTHER PTHR20858 1 266 4.2E-118 T 22-04-2016 YE1088 7a2d00ce1c19fd0d8aabced32871daef 266 PANTHER PTHR20858:SF17 1 266 4.2E-118 T 22-04-2016 YE1088 7a2d00ce1c19fd0d8aabced32871daef 266 Gene3D G3DSA:3.40.1190.20 6 263 3.4E-98 T 22-04-2016 IPR029056 Ribokinase-like YE1486 beffaa0b09da363c0bd37d07b37fa951 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 121 315 3.6E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE1486 beffaa0b09da363c0bd37d07b37fa951 321 SUPERFAMILY SSF161098 32 312 2.52E-57 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE1486 beffaa0b09da363c0bd37d07b37fa951 321 Gene3D G3DSA:1.10.3720.10 30 310 1.3E-50 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE1486 beffaa0b09da363c0bd37d07b37fa951 321 PANTHER PTHR30193 11 315 1.2E-153 T 22-04-2016 YE1486 beffaa0b09da363c0bd37d07b37fa951 321 PANTHER PTHR30193:SF5 11 315 1.2E-153 T 22-04-2016 YE2073 a93f49bf3afa23a6c307bd2b05772dba 271 SUPERFAMILY SSF53187 13 255 1.67E-65 T 22-04-2016 YE2073 a93f49bf3afa23a6c307bd2b05772dba 271 Pfam PF05013 N-formylglutamate amidohydrolase 35 233 1.8E-37 T 22-04-2016 IPR007709 N-formylglutamate amidohydrolase YE2073 a93f49bf3afa23a6c307bd2b05772dba 271 Gene3D G3DSA:3.40.630.40 19 257 9.6E-74 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 YE2073 a93f49bf3afa23a6c307bd2b05772dba 271 PIRSF PIRSF029730 5 264 4.5E-83 T 22-04-2016 IPR011227 Uncharacterised conserved protein UCP029730 YE3418 8b22787c05c0e0644fc37cfc81f76749 106 SUPERFAMILY SSF50022 1 102 1.83E-32 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 YE3418 8b22787c05c0e0644fc37cfc81f76749 106 PANTHER PTHR21496:SF7 1 101 6.1E-69 T 22-04-2016 YE3418 8b22787c05c0e0644fc37cfc81f76749 106 Gene3D G3DSA:2.102.10.10 1 103 1.4E-32 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 YE3418 8b22787c05c0e0644fc37cfc81f76749 106 Pfam PF00355 Rieske [2Fe-2S] domain 2 89 1.9E-19 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 YE3418 8b22787c05c0e0644fc37cfc81f76749 106 PANTHER PTHR21496 1 101 6.1E-69 T 22-04-2016 YE2748 1beaf137543eed063ddfb6bde89b4dec 255 PANTHER PTHR21091 3 236 1.3E-75 T 22-04-2016 YE2748 1beaf137543eed063ddfb6bde89b4dec 255 Gene3D G3DSA:3.30.950.10 120 244 8.2E-47 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 YE2748 1beaf137543eed063ddfb6bde89b4dec 255 Gene3D G3DSA:3.40.1010.10 3 119 9.0E-41 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 YE2748 1beaf137543eed063ddfb6bde89b4dec 255 PANTHER PTHR21091:SF16 3 236 1.3E-75 T 22-04-2016 YE2748 1beaf137543eed063ddfb6bde89b4dec 255 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 4 239 2.6E-91 T 22-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YE2748 1beaf137543eed063ddfb6bde89b4dec 255 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 84 117 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YE2748 1beaf137543eed063ddfb6bde89b4dec 255 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 5 216 8.3E-41 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 YE2748 1beaf137543eed063ddfb6bde89b4dec 255 SUPERFAMILY SSF53790 2 239 4.97E-74 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 YE2748 1beaf137543eed063ddfb6bde89b4dec 255 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 9 23 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 YE0160 d4cda6483d0616882c48173f1cdd48e1 225 Gene3D G3DSA:2.60.40.360 9 130 7.0E-43 T 22-04-2016 IPR008962 PapD-like YE0160 d4cda6483d0616882c48173f1cdd48e1 225 PRINTS PR00969 Pili chaperone signature 10 19 5.2E-27 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YE0160 d4cda6483d0616882c48173f1cdd48e1 225 PRINTS PR00969 Pili chaperone signature 59 80 5.2E-27 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YE0160 d4cda6483d0616882c48173f1cdd48e1 225 PRINTS PR00969 Pili chaperone signature 151 166 5.2E-27 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YE0160 d4cda6483d0616882c48173f1cdd48e1 225 PRINTS PR00969 Pili chaperone signature 112 127 5.2E-27 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YE0160 d4cda6483d0616882c48173f1cdd48e1 225 PRINTS PR00969 Pili chaperone signature 87 104 5.2E-27 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 YE0160 d4cda6483d0616882c48173f1cdd48e1 225 SUPERFAMILY SSF49354 4 130 4.97E-43 T 22-04-2016 IPR008962 PapD-like YE0160 d4cda6483d0616882c48173f1cdd48e1 225 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 157 218 3.0E-14 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YE0160 d4cda6483d0616882c48173f1cdd48e1 225 SUPERFAMILY SSF49584 124 221 8.11E-14 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YE0160 d4cda6483d0616882c48173f1cdd48e1 225 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 10 130 5.0E-42 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 YE0160 d4cda6483d0616882c48173f1cdd48e1 225 PANTHER PTHR30251:SF8 3 225 2.3E-115 T 22-04-2016 YE0160 d4cda6483d0616882c48173f1cdd48e1 225 Gene3D G3DSA:2.60.40.1070 134 219 6.9E-15 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal YE0160 d4cda6483d0616882c48173f1cdd48e1 225 PANTHER PTHR30251 3 225 2.3E-115 T 22-04-2016 YE1505 3ca021f3a9dd42292995014566ab9610 339 Pfam PF01212 Beta-eliminating lyase 4 285 6.2E-95 T 22-04-2016 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 YE1505 3ca021f3a9dd42292995014566ab9610 339 PIRSF PIRSF017617 1 339 7.0E-130 T 22-04-2016 IPR023603 Threonine aldolase YE1505 3ca021f3a9dd42292995014566ab9610 339 PANTHER PTHR10289 3 338 1.7E-158 T 22-04-2016 YE1505 3ca021f3a9dd42292995014566ab9610 339 SUPERFAMILY SSF53383 3 336 7.53E-112 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YE1505 3ca021f3a9dd42292995014566ab9610 339 Gene3D G3DSA:3.90.1150.10 247 336 9.4E-20 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YE1505 3ca021f3a9dd42292995014566ab9610 339 Gene3D G3DSA:3.40.640.10 2 246 2.8E-86 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YE1505 3ca021f3a9dd42292995014566ab9610 339 PANTHER PTHR10289:SF5 3 338 1.7E-158 T 22-04-2016 YE0351 9ca07c0aa56edff2cad28bea241d804d 478 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 6 474 5.1E-266 T 22-04-2016 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 YE0351 9ca07c0aa56edff2cad28bea241d804d 478 Gene3D G3DSA:1.10.40.30 411 462 6.8E-19 T 22-04-2016 YE0351 9ca07c0aa56edff2cad28bea241d804d 478 Pfam PF10415 Fumarase C C-terminus 411 464 4.5E-17 T 22-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 YE0351 9ca07c0aa56edff2cad28bea241d804d 478 PRINTS PR00149 Fumarate lyase superfamily signature 138 156 3.1E-27 T 22-04-2016 IPR000362 Fumarate lyase family YE0351 9ca07c0aa56edff2cad28bea241d804d 478 PRINTS PR00149 Fumarate lyase superfamily signature 274 301 3.1E-27 T 22-04-2016 IPR000362 Fumarate lyase family YE0351 9ca07c0aa56edff2cad28bea241d804d 478 PRINTS PR00149 Fumarate lyase superfamily signature 183 201 3.1E-27 T 22-04-2016 IPR000362 Fumarate lyase family YE0351 9ca07c0aa56edff2cad28bea241d804d 478 PRINTS PR00149 Fumarate lyase superfamily signature 320 336 3.1E-27 T 22-04-2016 IPR000362 Fumarate lyase family YE0351 9ca07c0aa56edff2cad28bea241d804d 478 PANTHER PTHR11444:SF25 1 477 0.0 T 22-04-2016 YE0351 9ca07c0aa56edff2cad28bea241d804d 478 SUPERFAMILY SSF48557 2 458 6.33E-143 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 YE0351 9ca07c0aa56edff2cad28bea241d804d 478 Pfam PF00206 Lyase 13 345 6.2E-113 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal YE0351 9ca07c0aa56edff2cad28bea241d804d 478 ProSitePatterns PS00163 Fumarate lyases signature. 320 329 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 YE0351 9ca07c0aa56edff2cad28bea241d804d 478 PANTHER PTHR11444 1 477 0.0 T 22-04-2016 IPR000362 Fumarate lyase family YE0351 9ca07c0aa56edff2cad28bea241d804d 478 Gene3D G3DSA:1.20.200.10 143 405 1.1E-88 T 22-04-2016 YE0351 9ca07c0aa56edff2cad28bea241d804d 478 PRINTS PR00145 Argininosuccinate lyase family signature 178 198 3.9E-5 T 22-04-2016 YE0351 9ca07c0aa56edff2cad28bea241d804d 478 PRINTS PR00145 Argininosuccinate lyase family signature 137 159 3.9E-5 T 22-04-2016 YE0351 9ca07c0aa56edff2cad28bea241d804d 478 PRINTS PR00145 Argininosuccinate lyase family signature 320 336 3.9E-5 T 22-04-2016 YE0351 9ca07c0aa56edff2cad28bea241d804d 478 Gene3D G3DSA:1.10.275.10 4 142 2.7E-56 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal YE3497 f8f64c54a5222888ab2ef16d44c02ff5 306 Pfam PF04754 Putative transposase, YhgA-like 6 207 2.3E-87 T 22-04-2016 IPR006842 Transposase (putative), YhgA-like YE3497 f8f64c54a5222888ab2ef16d44c02ff5 306 PANTHER PTHR34611 1 306 6.8E-184 T 22-04-2016 YE3497 f8f64c54a5222888ab2ef16d44c02ff5 306 PANTHER PTHR34611:SF3 1 306 6.8E-184 T 22-04-2016 YE3497 f8f64c54a5222888ab2ef16d44c02ff5 306 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 7 304 5.5E-68 T 22-04-2016 IPR010106 Conserved hypothetical protein CHP01784 YE2969 ca0b8031afd36fe262f989f4755a5c5e 264 PANTHER PTHR10992:SF768 1 254 1.5E-81 T 22-04-2016 YE2969 ca0b8031afd36fe262f989f4755a5c5e 264 SUPERFAMILY SSF53474 2 253 2.75E-53 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE2969 ca0b8031afd36fe262f989f4755a5c5e 264 Gene3D G3DSA:3.40.50.1820 15 254 1.2E-51 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE2969 ca0b8031afd36fe262f989f4755a5c5e 264 PRINTS PR00111 Alpha/beta hydrolase fold signature 99 112 3.3E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 YE2969 ca0b8031afd36fe262f989f4755a5c5e 264 PRINTS PR00111 Alpha/beta hydrolase fold signature 85 98 3.3E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 YE2969 ca0b8031afd36fe262f989f4755a5c5e 264 PRINTS PR00111 Alpha/beta hydrolase fold signature 42 57 3.3E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 YE2969 ca0b8031afd36fe262f989f4755a5c5e 264 Pfam PF12697 Alpha/beta hydrolase family 19 246 2.8E-22 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 YE2969 ca0b8031afd36fe262f989f4755a5c5e 264 PANTHER PTHR10992 1 254 1.5E-81 T 22-04-2016 YE2568 b643acf452ff7119736c407bbf33df6a 549 PANTHER PTHR10795 190 328 5.6E-42 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related YE2568 b643acf452ff7119736c407bbf33df6a 549 PANTHER PTHR10795 467 540 5.6E-42 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related YE2568 b643acf452ff7119736c407bbf33df6a 549 PANTHER PTHR10795 350 449 5.6E-42 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related YE2568 b643acf452ff7119736c407bbf33df6a 549 PANTHER PTHR10795:SF416 190 328 5.6E-42 T 22-04-2016 YE2568 b643acf452ff7119736c407bbf33df6a 549 PANTHER PTHR10795:SF416 467 540 5.6E-42 T 22-04-2016 YE2568 b643acf452ff7119736c407bbf33df6a 549 PANTHER PTHR10795:SF416 350 449 5.6E-42 T 22-04-2016 YE2568 b643acf452ff7119736c407bbf33df6a 549 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 224 235 - T 22-04-2016 IPR023827 Peptidase S8, subtilisin, Asp-active site YE2568 b643acf452ff7119736c407bbf33df6a 549 PRINTS PR00723 Subtilisin serine protease family (S8) signature 263 276 5.7E-15 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related YE2568 b643acf452ff7119736c407bbf33df6a 549 PRINTS PR00723 Subtilisin serine protease family (S8) signature 219 238 5.7E-15 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related YE2568 b643acf452ff7119736c407bbf33df6a 549 PRINTS PR00723 Subtilisin serine protease family (S8) signature 468 484 5.7E-15 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related YE2568 b643acf452ff7119736c407bbf33df6a 549 Gene3D G3DSA:3.40.50.200 185 539 1.8E-72 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 YE2568 b643acf452ff7119736c407bbf33df6a 549 Pfam PF00082 Subtilase family 219 526 1.1E-33 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 YE2568 b643acf452ff7119736c407bbf33df6a 549 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 267 277 - T 22-04-2016 IPR022398 Peptidase S8, subtilisin, His-active site YE2568 b643acf452ff7119736c407bbf33df6a 549 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 469 479 - T 22-04-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site YE2568 b643acf452ff7119736c407bbf33df6a 549 SUPERFAMILY SSF52743 208 539 6.68E-63 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 YE3781 d2fa1d78d682866a5825753a9e736ee5 389 Gene3D G3DSA:2.30.40.10 317 376 5.6E-8 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YE3781 d2fa1d78d682866a5825753a9e736ee5 389 TIGRFAM TIGR03583 EF_0837: putative amidohydrolase, EF_0837/AHA_3915 family 2 376 2.6E-164 T 22-04-2016 IPR020043 Amidohydrolase EF0837/AHA3915, putative KEGG: 00051+3.1.1.-|KEGG: 00053+3.1.1.-|KEGG: 00363+3.1.1.-|KEGG: 00365+3.1.1.-|KEGG: 00534+3.1.1.-|KEGG: 00564+3.1.1.-|KEGG: 00623+3.1.1.-|KEGG: 00640+3.1.1.-|KEGG: 00830+3.1.1.-|KEGG: 00900+3.1.1.-|KEGG: 00940+3.1.1.-|KEGG: 00960+3.1.1.- YE3781 d2fa1d78d682866a5825753a9e736ee5 389 Gene3D G3DSA:3.20.20.140 78 316 1.3E-116 T 22-04-2016 YE3781 d2fa1d78d682866a5825753a9e736ee5 389 SUPERFAMILY SSF51556 63 328 1.26E-72 T 22-04-2016 IPR032466 Metal-dependent hydrolase YE3781 d2fa1d78d682866a5825753a9e736ee5 389 Gene3D G3DSA:2.30.40.10 1 77 1.7E-12 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YE3781 d2fa1d78d682866a5825753a9e736ee5 389 PIRSF PIRSF039004 1 387 4.3E-133 T 22-04-2016 IPR020043 Amidohydrolase EF0837/AHA3915, putative KEGG: 00051+3.1.1.-|KEGG: 00053+3.1.1.-|KEGG: 00363+3.1.1.-|KEGG: 00365+3.1.1.-|KEGG: 00534+3.1.1.-|KEGG: 00564+3.1.1.-|KEGG: 00623+3.1.1.-|KEGG: 00640+3.1.1.-|KEGG: 00830+3.1.1.-|KEGG: 00900+3.1.1.-|KEGG: 00940+3.1.1.-|KEGG: 00960+3.1.1.- YE3781 d2fa1d78d682866a5825753a9e736ee5 389 Pfam PF01979 Amidohydrolase family 61 359 3.1E-12 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 YE3781 d2fa1d78d682866a5825753a9e736ee5 389 SUPERFAMILY SSF51338 329 376 2.82E-18 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YE3781 d2fa1d78d682866a5825753a9e736ee5 389 SUPERFAMILY SSF51338 1 63 2.82E-18 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YE0093 efe095dd42616e100ac72fcd2251a86d 255 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 249 40.533 T 22-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 YE0093 efe095dd42616e100ac72fcd2251a86d 255 Pfam PF00121 Triosephosphate isomerase 5 246 1.3E-93 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 YE0093 efe095dd42616e100ac72fcd2251a86d 255 PANTHER PTHR21139 1 255 7.8E-133 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 YE0093 efe095dd42616e100ac72fcd2251a86d 255 SUPERFAMILY SSF51351 1 249 1.2E-90 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 YE0093 efe095dd42616e100ac72fcd2251a86d 255 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 22-04-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 YE0093 efe095dd42616e100ac72fcd2251a86d 255 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 240 7.5E-98 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 YE0093 efe095dd42616e100ac72fcd2251a86d 255 Gene3D G3DSA:3.20.20.70 1 250 1.1E-102 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YE2491 d55be55d02fdd55516d995b11e8af5bb 149 PANTHER PTHR10681:SF104 12 132 1.2E-25 T 22-04-2016 YE2491 d55be55d02fdd55516d995b11e8af5bb 149 PANTHER PTHR10681 12 132 1.2E-25 T 22-04-2016 YE2491 d55be55d02fdd55516d995b11e8af5bb 149 Pfam PF08534 Redoxin 12 134 1.3E-19 T 22-04-2016 IPR013740 Redoxin GO:0016491 YE2491 d55be55d02fdd55516d995b11e8af5bb 149 SUPERFAMILY SSF52833 10 147 3.18E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold YE2491 d55be55d02fdd55516d995b11e8af5bb 149 Gene3D G3DSA:3.40.30.10 7 145 8.4E-39 T 22-04-2016 IPR012336 Thioredoxin-like fold YE0966 21f213cd699531cd9715e8c2628e8930 387 SUPERFAMILY SSF50952 34 384 2.35E-48 T 22-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 YE0966 21f213cd699531cd9715e8c2628e8930 387 Pfam PF07995 Glucose / Sorbosone dehydrogenase 48 380 2.9E-135 T 22-04-2016 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 YE0966 21f213cd699531cd9715e8c2628e8930 387 PANTHER PTHR19328 31 376 1.7E-80 T 22-04-2016 YE0966 21f213cd699531cd9715e8c2628e8930 387 Gene3D G3DSA:2.120.10.30 27 381 5.2E-107 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like YE0116 535eca457f9c41573babdb9e24efccc0 879 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 385 405 9.1E-69 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 YE0116 535eca457f9c41573babdb9e24efccc0 879 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 534 554 9.1E-69 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 YE0116 535eca457f9c41573babdb9e24efccc0 879 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 185 201 9.1E-69 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 YE0116 535eca457f9c41573babdb9e24efccc0 879 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 708 734 9.1E-69 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 YE0116 535eca457f9c41573babdb9e24efccc0 879 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 132 145 9.1E-69 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 YE0116 535eca457f9c41573babdb9e24efccc0 879 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 244 259 9.1E-69 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 YE0116 535eca457f9c41573babdb9e24efccc0 879 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 576 605 9.1E-69 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 YE0116 535eca457f9c41573babdb9e24efccc0 879 SUPERFAMILY SSF51621 6 879 0.0 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YE0116 535eca457f9c41573babdb9e24efccc0 879 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 133 144 - T 22-04-2016 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 YE0116 535eca457f9c41573babdb9e24efccc0 879 Pfam PF00311 Phosphoenolpyruvate carboxylase 128 879 3.9E-292 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 YE0116 535eca457f9c41573babdb9e24efccc0 879 PANTHER PTHR30523:SF3 1 879 0.0 T 22-04-2016 YE0116 535eca457f9c41573babdb9e24efccc0 879 Gene3D G3DSA:1.20.1440.90 272 387 3.3E-33 T 22-04-2016 YE0116 535eca457f9c41573babdb9e24efccc0 879 PANTHER PTHR30523 1 879 0.0 T 22-04-2016 YE0116 535eca457f9c41573babdb9e24efccc0 879 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 879 18.293 T 22-04-2016 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 YE0116 535eca457f9c41573babdb9e24efccc0 879 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 536 548 - T 22-04-2016 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 YE2195 07b51b7678e724971b88bf86ddd68287 335 Hamap MF_01004 Vitamin B12 import system permease protein BtuC [btuC]. 7 333 32.889 T 22-04-2016 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC GO:0015889|GO:0016020 YE2195 07b51b7678e724971b88bf86ddd68287 335 PANTHER PTHR30472:SF29 7 335 7.4E-209 T 22-04-2016 YE2195 07b51b7678e724971b88bf86ddd68287 335 Gene3D G3DSA:1.10.3470.10 11 331 8.7E-96 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YE2195 07b51b7678e724971b88bf86ddd68287 335 SUPERFAMILY SSF81345 14 330 5.49E-79 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YE2195 07b51b7678e724971b88bf86ddd68287 335 PANTHER PTHR30472 7 335 7.4E-209 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 YE2195 07b51b7678e724971b88bf86ddd68287 335 Pfam PF01032 FecCD transport family 28 330 3.5E-83 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 YE2209 9ef7159255cd5daa2b32ff1c2fdefbfd 520 Gene3D G3DSA:3.60.120.10 6 515 7.9E-163 T 22-04-2016 IPR005801 ADC synthase GO:0009058 YE2209 9ef7159255cd5daa2b32ff1c2fdefbfd 520 PANTHER PTHR11236 1 513 2.8E-274 T 22-04-2016 YE2209 9ef7159255cd5daa2b32ff1c2fdefbfd 520 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 17 515 3.1E-248 T 22-04-2016 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 YE2209 9ef7159255cd5daa2b32ff1c2fdefbfd 520 PIRSF PIRSF001373 1 520 7.8E-252 T 22-04-2016 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 YE2209 9ef7159255cd5daa2b32ff1c2fdefbfd 520 PANTHER PTHR11236:SF22 1 513 2.8E-274 T 22-04-2016 YE2209 9ef7159255cd5daa2b32ff1c2fdefbfd 520 SUPERFAMILY SSF56322 7 515 1.31E-165 T 22-04-2016 IPR005801 ADC synthase GO:0009058 YE2209 9ef7159255cd5daa2b32ff1c2fdefbfd 520 PRINTS PR00095 Anthranilate synthase component I signature 350 363 1.5E-24 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 YE2209 9ef7159255cd5daa2b32ff1c2fdefbfd 520 PRINTS PR00095 Anthranilate synthase component I signature 459 473 1.5E-24 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 YE2209 9ef7159255cd5daa2b32ff1c2fdefbfd 520 PRINTS PR00095 Anthranilate synthase component I signature 364 377 1.5E-24 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 YE2209 9ef7159255cd5daa2b32ff1c2fdefbfd 520 PRINTS PR00095 Anthranilate synthase component I signature 444 458 1.5E-24 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 YE2209 9ef7159255cd5daa2b32ff1c2fdefbfd 520 Pfam PF00425 chorismate binding enzyme 242 502 2.6E-84 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal YE2209 9ef7159255cd5daa2b32ff1c2fdefbfd 520 Pfam PF04715 Anthranilate synthase component I, N terminal region 19 193 1.3E-16 T 22-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 YE2530 cabc6d065c1131883814f53728eb53b5 58 Pfam PF06183 DinI-like family 1 56 1.2E-21 T 22-04-2016 IPR010391 DNA damage-inducible protein DinI-like YE2530 cabc6d065c1131883814f53728eb53b5 58 PANTHER PTHR36572:SF2 1 57 9.3E-18 T 22-04-2016 YE2530 cabc6d065c1131883814f53728eb53b5 58 PANTHER PTHR36572 1 57 9.3E-18 T 22-04-2016 YE2530 cabc6d065c1131883814f53728eb53b5 58 SUPERFAMILY SSF54857 1 57 2.62E-16 T 22-04-2016 IPR010391 DNA damage-inducible protein DinI-like YE2530 cabc6d065c1131883814f53728eb53b5 58 Gene3D G3DSA:3.30.910.10 1 57 5.2E-20 T 22-04-2016 IPR010391 DNA damage-inducible protein DinI-like YE2699 5236c5f9b1ee3e59eee148abbb4cf3c6 387 PANTHER PTHR37951:SF2 268 383 7.8E-163 T 22-04-2016 YE2699 5236c5f9b1ee3e59eee148abbb4cf3c6 387 PANTHER PTHR37951:SF2 3 238 7.8E-163 T 22-04-2016 YE2699 5236c5f9b1ee3e59eee148abbb4cf3c6 387 Pfam PF06812 ImpA, N-terminal, type VI secretion system 17 140 2.1E-26 T 22-04-2016 IPR010657 ImpA, N-terminal YE2699 5236c5f9b1ee3e59eee148abbb4cf3c6 387 PANTHER PTHR37951 268 383 7.8E-163 T 22-04-2016 YE2699 5236c5f9b1ee3e59eee148abbb4cf3c6 387 PANTHER PTHR37951 3 238 7.8E-163 T 22-04-2016 YE1256 61884e24beca433ee984a1e2cf36aa1c 488 PANTHER PTHR30175 1 473 2.6E-212 T 22-04-2016 YE1256 61884e24beca433ee984a1e2cf36aa1c 488 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 24 41 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 YE1256 61884e24beca433ee984a1e2cf36aa1c 488 Pfam PF00367 phosphotransferase system, EIIB 13 46 6.6E-15 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 YE1256 61884e24beca433ee984a1e2cf36aa1c 488 SUPERFAMILY SSF55604 12 85 1.2E-21 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YE1256 61884e24beca433ee984a1e2cf36aa1c 488 PANTHER PTHR30175:SF9 1 473 2.6E-212 T 22-04-2016 YE1256 61884e24beca433ee984a1e2cf36aa1c 488 Pfam PF02378 Phosphotransferase system, EIIC 117 400 2.4E-40 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 YE1256 61884e24beca433ee984a1e2cf36aa1c 488 Gene3D G3DSA:3.30.1360.60 7 85 9.1E-26 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YE2166 798c15038cb0b5f994429487c798982c 355 Gene3D G3DSA:2.40.440.10 93 237 2.3E-36 T 22-04-2016 YE2166 798c15038cb0b5f994429487c798982c 355 PANTHER PTHR30582 53 312 1.4E-129 T 22-04-2016 YE2166 798c15038cb0b5f994429487c798982c 355 SUPERFAMILY SSF141523 98 235 4.58E-30 T 22-04-2016 YE2166 798c15038cb0b5f994429487c798982c 355 Pfam PF03734 L,D-transpeptidase catalytic domain 100 235 1.8E-20 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 YE2166 798c15038cb0b5f994429487c798982c 355 PANTHER PTHR30582:SF9 53 312 1.4E-129 T 22-04-2016 YE2795 8ac70ae7bd20a01142b3e24f1a14096b 267 Gene3D G3DSA:3.40.50.620 38 169 2.9E-9 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YE2795 8ac70ae7bd20a01142b3e24f1a14096b 267 PIRSF PIRSF005011 1 248 2.0E-150 T 22-04-2016 IPR023604 Uncharacterised protein family SanA YE2795 8ac70ae7bd20a01142b3e24f1a14096b 267 PANTHER PTHR30336:SF0 2 242 8.9E-129 T 22-04-2016 YE2795 8ac70ae7bd20a01142b3e24f1a14096b 267 Pfam PF02698 DUF218 domain 48 170 1.9E-18 T 22-04-2016 IPR003848 Domain of unknown function DUF218 YE2795 8ac70ae7bd20a01142b3e24f1a14096b 267 PANTHER PTHR30336 2 242 8.9E-129 T 22-04-2016 YE0565a 6834bd16b2a5897d87409fd57b24c969 53 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 53 18.495 T 22-04-2016 IPR009760 Protein of unknown function DUF1328 GO:0005886 YE0565a 6834bd16b2a5897d87409fd57b24c969 53 PIRSF PIRSF036466 1 53 1.5E-19 T 22-04-2016 IPR009760 Protein of unknown function DUF1328 GO:0005886 YE0565a 6834bd16b2a5897d87409fd57b24c969 53 Pfam PF07043 Protein of unknown function (DUF1328) 6 44 1.7E-13 T 22-04-2016 IPR009760 Protein of unknown function DUF1328 GO:0005886 YE2364 573190b049fe0f1ac49c72f8aee893b9 429 Pfam PF00589 Phage integrase family 205 397 4.2E-21 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 YE2364 573190b049fe0f1ac49c72f8aee893b9 429 Gene3D G3DSA:1.10.443.10 203 408 1.6E-41 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 YE2364 573190b049fe0f1ac49c72f8aee893b9 429 PANTHER PTHR30349 158 429 3.1E-148 T 22-04-2016 YE2364 573190b049fe0f1ac49c72f8aee893b9 429 PANTHER PTHR30349 14 142 3.1E-148 T 22-04-2016 YE2364 573190b049fe0f1ac49c72f8aee893b9 429 Pfam PF12167 Domain of unknown function (DUF3596) 7 69 2.3E-23 T 22-04-2016 IPR022000 Domain of unknown function (DUF3596) YE2364 573190b049fe0f1ac49c72f8aee893b9 429 Gene3D G3DSA:1.10.150.130 82 196 7.5E-6 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal YE2364 573190b049fe0f1ac49c72f8aee893b9 429 SUPERFAMILY SSF56349 82 406 8.83E-57 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YE2364 573190b049fe0f1ac49c72f8aee893b9 429 PANTHER PTHR30349:SF36 158 429 3.1E-148 T 22-04-2016 YE2364 573190b049fe0f1ac49c72f8aee893b9 429 PANTHER PTHR30349:SF36 14 142 3.1E-148 T 22-04-2016 YE0459 2164df1096892b8c00db78044491b75b 412 PANTHER PTHR41379 1 405 1.5E-167 T 22-04-2016 YE0459 2164df1096892b8c00db78044491b75b 412 Gene3D G3DSA:1.50.10.110 56 382 3.0E-68 T 22-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 YE0459 2164df1096892b8c00db78044491b75b 412 PANTHER PTHR41379:SF1 1 405 1.5E-167 T 22-04-2016 YE0459 2164df1096892b8c00db78044491b75b 412 Pfam PF05426 Alginate lyase 73 352 1.5E-71 T 22-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 YE0459 2164df1096892b8c00db78044491b75b 412 SUPERFAMILY SSF48230 80 359 2.29E-49 T 22-04-2016 IPR008929 Chondroitin AC/alginate lyase YE3541 49725e38eb0735cdd4d9e90615b114d8 89 Pfam PF01313 Bacterial export proteins, family 3 4 75 1.5E-23 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YE3541 49725e38eb0735cdd4d9e90615b114d8 89 TIGRFAM TIGR01403 fliQ_rel_III: type III secretion protein, HrpO family 4 80 1.5E-27 T 22-04-2016 IPR006306 Type III secretion protein HrpO GO:0006810|GO:0016021 YE3541 49725e38eb0735cdd4d9e90615b114d8 89 PANTHER PTHR34040:SF3 1 79 8.0E-29 T 22-04-2016 YE3541 49725e38eb0735cdd4d9e90615b114d8 89 PIRSF PIRSF004669 1 85 3.1E-23 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YE3541 49725e38eb0735cdd4d9e90615b114d8 89 PANTHER PTHR34040 1 79 8.0E-29 T 22-04-2016 YE3541 49725e38eb0735cdd4d9e90615b114d8 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 16 37 4.6E-24 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YE3541 49725e38eb0735cdd4d9e90615b114d8 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 37 52 4.6E-24 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YE3541 49725e38eb0735cdd4d9e90615b114d8 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 52 74 4.6E-24 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 YE0208 0dcd513c4097b71fefec4884ba573b7e 269 Gene3D G3DSA:3.30.1240.10 82 176 7.2E-23 T 22-04-2016 YE0208 0dcd513c4097b71fefec4884ba573b7e 269 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 22-04-2016 IPR000150 Cof protein GO:0016787 YE0208 0dcd513c4097b71fefec4884ba573b7e 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 260 7.8E-62 T 22-04-2016 IPR023214 HAD-like domain YE0208 0dcd513c4097b71fefec4884ba573b7e 269 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 229 7.5E-27 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 YE0208 0dcd513c4097b71fefec4884ba573b7e 269 Gene3D G3DSA:3.40.50.1000 1 72 5.4E-54 T 22-04-2016 IPR023214 HAD-like domain YE0208 0dcd513c4097b71fefec4884ba573b7e 269 Gene3D G3DSA:3.40.50.1000 177 265 5.4E-54 T 22-04-2016 IPR023214 HAD-like domain YE0208 0dcd513c4097b71fefec4884ba573b7e 269 PANTHER PTHR10000:SF20 1 266 3.2E-142 T 22-04-2016 YE0208 0dcd513c4097b71fefec4884ba573b7e 269 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 260 3.1E-63 T 22-04-2016 IPR000150 Cof protein GO:0016787 YE0208 0dcd513c4097b71fefec4884ba573b7e 269 SUPERFAMILY SSF56784 1 265 3.83E-69 T 22-04-2016 IPR023214 HAD-like domain YE0208 0dcd513c4097b71fefec4884ba573b7e 269 PANTHER PTHR10000 1 266 3.2E-142 T 22-04-2016 YE3844 b0c9766066dc36f62d12b6088028b0de 183 Pfam PF00436 Single-strand binding protein family 6 112 2.1E-42 T 22-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 YE3844 b0c9766066dc36f62d12b6088028b0de 183 PANTHER PTHR10302 4 183 9.4E-55 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 YE3844 b0c9766066dc36f62d12b6088028b0de 183 Gene3D G3DSA:2.40.50.140 4 116 3.4E-58 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE3844 b0c9766066dc36f62d12b6088028b0de 183 Gene3D G3DSA:2.40.50.140 152 183 3.4E-58 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE3844 b0c9766066dc36f62d12b6088028b0de 183 Hamap MF_00984 Single-stranded DNA-binding protein. 6 117 39.4 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 YE3844 b0c9766066dc36f62d12b6088028b0de 183 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 183 6.6E-61 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 YE3844 b0c9766066dc36f62d12b6088028b0de 183 PIRSF PIRSF002070 2 162 8.1E-41 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 YE3844 b0c9766066dc36f62d12b6088028b0de 183 SUPERFAMILY SSF50249 4 183 1.68E-61 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE3397 fe36aee36ac28d698d1af0ff0fa18f71 192 Pfam PF03695 Uncharacterised protein family (UPF0149) 13 177 2.0E-36 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 YE3397 fe36aee36ac28d698d1af0ff0fa18f71 192 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 15 166 1.4E-10 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 YE3397 fe36aee36ac28d698d1af0ff0fa18f71 192 SUPERFAMILY SSF101327 8 176 1.31E-50 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 YE3397 fe36aee36ac28d698d1af0ff0fa18f71 192 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 6 190 36.977 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 YE3397 fe36aee36ac28d698d1af0ff0fa18f71 192 PANTHER PTHR37528 2 192 1.2E-63 T 22-04-2016 YE0347 d34e74459aca0b92fa6aea31914a05dd 387 Pfam PF02595 Glycerate kinase family 3 373 1.4E-149 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 YE0347 d34e74459aca0b92fa6aea31914a05dd 387 PANTHER PTHR21599:SF4 1 377 1.9E-230 T 22-04-2016 YE0347 d34e74459aca0b92fa6aea31914a05dd 387 Gene3D G3DSA:3.90.1510.10 42 275 4.4E-100 T 22-04-2016 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 YE0347 d34e74459aca0b92fa6aea31914a05dd 387 PIRSF PIRSF006078 1 378 4.5E-141 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 YE0347 d34e74459aca0b92fa6aea31914a05dd 387 PANTHER PTHR21599 1 377 1.9E-230 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 YE0347 d34e74459aca0b92fa6aea31914a05dd 387 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 7.0E-166 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 YE0347 d34e74459aca0b92fa6aea31914a05dd 387 SUPERFAMILY SSF110738 1 375 6.8E-142 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 YE4001 cdb29c31597b76599a3621a31767efc5 205 SUPERFAMILY SSF103473 9 197 1.31E-12 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE4001 cdb29c31597b76599a3621a31767efc5 205 Gene3D G3DSA:1.20.1250.20 20 196 2.4E-10 T 22-04-2016 YE0754 ba4a4f028018c5bbbeebba782ddda673 119 SUPERFAMILY SSF55620 3 119 7.78E-40 T 22-04-2016 YE0754 ba4a4f028018c5bbbeebba782ddda673 119 PANTHER PTHR12589 5 119 2.6E-47 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein YE0754 ba4a4f028018c5bbbeebba782ddda673 119 Gene3D G3DSA:3.30.479.10 2 118 1.1E-39 T 22-04-2016 YE0754 ba4a4f028018c5bbbeebba782ddda673 119 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 5 96 9.5E-34 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein YE0754 ba4a4f028018c5bbbeebba782ddda673 119 PIRSF PIRSF006113 1 119 1.1E-53 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein YE0754 ba4a4f028018c5bbbeebba782ddda673 119 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 6 118 5.9E-34 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein YE1703 1289432426df11d2d3874252366226df 164 PANTHER PTHR40593 1 162 2.3E-76 T 22-04-2016 YE1703 1289432426df11d2d3874252366226df 164 Pfam PF13036 Peptidoglycan-synthase activator LpoB 8 162 3.4E-43 T 22-04-2016 IPR014094 Penicillin-binding protein activator LpoB YE1703 1289432426df11d2d3874252366226df 164 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 15 163 4.1E-47 T 22-04-2016 IPR014094 Penicillin-binding protein activator LpoB YE3189 b56f0d38bf53c3fdbc91dc06c392f609 713 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 72 713 1.0E-104 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 YE3189 b56f0d38bf53c3fdbc91dc06c392f609 713 Gene3D G3DSA:2.170.130.10 50 175 2.5E-36 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YE3189 b56f0d38bf53c3fdbc91dc06c392f609 713 Gene3D G3DSA:2.40.170.20 187 713 2.1E-146 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YE3189 b56f0d38bf53c3fdbc91dc06c392f609 713 Pfam PF00593 TonB dependent receptor 475 711 2.2E-29 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 YE3189 b56f0d38bf53c3fdbc91dc06c392f609 713 PANTHER PTHR32552 57 713 0.0 T 22-04-2016 YE3189 b56f0d38bf53c3fdbc91dc06c392f609 713 PANTHER PTHR32552:SF6 57 713 0.0 T 22-04-2016 YE3189 b56f0d38bf53c3fdbc91dc06c392f609 713 SUPERFAMILY SSF56935 56 713 1.97E-126 T 22-04-2016 YE3189 b56f0d38bf53c3fdbc91dc06c392f609 713 Pfam PF07715 TonB-dependent Receptor Plug Domain 71 168 1.1E-18 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 YE2951 9e8510d9928daa018bd94512948be14b 339 Pfam PF06166 Protein of unknown function (DUF979) 6 338 2.2E-130 T 22-04-2016 IPR009323 Protein of unknown function DUF979 YE4095 6fd86317bb6ebb66bbbf9832984e3578 563 PANTHER PTHR12216 6 558 0.0 T 22-04-2016 YE4095 6fd86317bb6ebb66bbbf9832984e3578 563 Gene3D G3DSA:3.40.1770.10 8 141 2.3E-163 T 22-04-2016 YE4095 6fd86317bb6ebb66bbbf9832984e3578 563 Gene3D G3DSA:3.40.1770.10 360 555 2.3E-163 T 22-04-2016 YE4095 6fd86317bb6ebb66bbbf9832984e3578 563 Pfam PF01175 Urocanase 12 547 4.3E-261 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 YE4095 6fd86317bb6ebb66bbbf9832984e3578 563 SUPERFAMILY SSF111326 7 555 7.46E-261 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 YE4095 6fd86317bb6ebb66bbbf9832984e3578 563 PIRSF PIRSF001423 2 561 1.5E-292 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 YE4095 6fd86317bb6ebb66bbbf9832984e3578 563 TIGRFAM TIGR01228 hutU: urocanate hydratase 11 554 0.0 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 YE4095 6fd86317bb6ebb66bbbf9832984e3578 563 Gene3D G3DSA:3.40.50.10730 142 349 7.1E-95 T 22-04-2016 YE4095 6fd86317bb6ebb66bbbf9832984e3578 563 ProSitePatterns PS01233 Urocanase signature. 442 457 - T 22-04-2016 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 YE4095 6fd86317bb6ebb66bbbf9832984e3578 563 Hamap MF_00577 Urocanate hydratase [hutU]. 3 556 50.157 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 YE4095 6fd86317bb6ebb66bbbf9832984e3578 563 PANTHER PTHR12216:SF3 6 558 0.0 T 22-04-2016 YE1645 e7facc0e4cd4fc8892fd5992b77082aa 392 PANTHER PTHR35861:SF1 1 391 4.5E-99 T 22-04-2016 YE1645 e7facc0e4cd4fc8892fd5992b77082aa 392 Pfam PF04984 Phage tail sheath protein 98 374 2.8E-40 T 22-04-2016 IPR007067 Tail sheath protein YE1645 e7facc0e4cd4fc8892fd5992b77082aa 392 Pfam PF04984 Phage tail sheath protein 1 93 4.4E-9 T 22-04-2016 IPR007067 Tail sheath protein YE1645 e7facc0e4cd4fc8892fd5992b77082aa 392 PANTHER PTHR35861 1 391 4.5E-99 T 22-04-2016 YE1466 d44cca751f0e92802a1190b49a82ac56 274 PANTHER PTHR30429 1 271 1.4E-130 T 22-04-2016 IPR004872 Lipoprotein NlpA family YE1466 d44cca751f0e92802a1190b49a82ac56 274 PANTHER PTHR30429:SF0 1 271 1.4E-130 T 22-04-2016 YE1466 d44cca751f0e92802a1190b49a82ac56 274 SUPERFAMILY SSF53850 32 270 5.02E-67 T 22-04-2016 YE1466 d44cca751f0e92802a1190b49a82ac56 274 PIRSF PIRSF002854 1 271 1.6E-97 T 22-04-2016 IPR004872 Lipoprotein NlpA family YE1466 d44cca751f0e92802a1190b49a82ac56 274 Gene3D G3DSA:3.40.190.10 108 221 8.8E-44 T 22-04-2016 YE1466 d44cca751f0e92802a1190b49a82ac56 274 Pfam PF03180 NLPA lipoprotein 32 269 2.4E-76 T 22-04-2016 IPR004872 Lipoprotein NlpA family YE1297 c1464d2aa4135e97a1ba4174e8ae2bd2 377 PANTHER PTHR10283:SF95 29 377 5.3E-50 T 22-04-2016 YE1297 c1464d2aa4135e97a1ba4174e8ae2bd2 377 PANTHER PTHR10283 29 377 5.3E-50 T 22-04-2016 YE1297 c1464d2aa4135e97a1ba4174e8ae2bd2 377 Pfam PF03600 Citrate transporter 30 318 6.6E-22 T 22-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 YE0127 370efbf6484bbd294ad064e033470b0b 593 PANTHER PTHR24222 16 582 1.0E-303 T 22-04-2016 YE0127 370efbf6484bbd294ad064e033470b0b 593 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 22 560 5.0E-224 T 22-04-2016 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 YE0127 370efbf6484bbd294ad064e033470b0b 593 SUPERFAMILY SSF90123 16 317 9.29E-44 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YE0127 370efbf6484bbd294ad064e033470b0b 593 Gene3D G3DSA:3.40.50.300 336 563 5.5E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0127 370efbf6484bbd294ad064e033470b0b 593 Pfam PF00005 ABC transporter 353 500 2.2E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE0127 370efbf6484bbd294ad064e033470b0b 593 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE0127 370efbf6484bbd294ad064e033470b0b 593 SMART SM00382 362 565 8.5E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain YE0127 370efbf6484bbd294ad064e033470b0b 593 SUPERFAMILY SSF52540 326 561 8.27E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0127 370efbf6484bbd294ad064e033470b0b 593 Gene3D G3DSA:1.20.1560.10 16 318 4.4E-39 T 22-04-2016 YE0127 370efbf6484bbd294ad064e033470b0b 593 PANTHER PTHR24222:SF0 16 582 1.0E-303 T 22-04-2016 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 YE0127 370efbf6484bbd294ad064e033470b0b 593 Pfam PF00664 ABC transporter transmembrane region 30 286 1.6E-9 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YE3921 238b2593ace987d953e258571b3044ef 100 SUPERFAMILY SSF54189 3 92 5.04E-31 T 22-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3921 238b2593ace987d953e258571b3044ef 100 Gene3D G3DSA:3.30.70.330 6 98 4.7E-35 T 22-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 YE3921 238b2593ace987d953e258571b3044ef 100 Pfam PF00276 Ribosomal protein L23 9 95 5.8E-32 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 YE3921 238b2593ace987d953e258571b3044ef 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 23.063 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 YE3921 238b2593ace987d953e258571b3044ef 100 PANTHER PTHR11620 9 95 5.2E-35 T 22-04-2016 YE3921 238b2593ace987d953e258571b3044ef 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 22-04-2016 IPR001014 Ribosomal protein L23/L25, conserved site YE1145 8720394933cb94a22657f81403ea0153 64 Hamap MF_01566 UPF0370 protein YpfN [ypfN]. 1 62 28.077 T 22-04-2016 IPR020910 Uncharacterised protein family UPF0370 YE1145 8720394933cb94a22657f81403ea0153 64 Pfam PF13980 Uncharacterised protein family (UPF0370) 1 61 2.8E-37 T 22-04-2016 IPR020910 Uncharacterised protein family UPF0370 YE1149 2f80e4c8fb051ed1af08ab6d3e3b9c12 157 Pfam PF13174 Tetratricopeptide repeat 7 31 0.095 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 YE1149 2f80e4c8fb051ed1af08ab6d3e3b9c12 157 PANTHER PTHR23083 8 139 3.8E-14 T 22-04-2016 YE1149 2f80e4c8fb051ed1af08ab6d3e3b9c12 157 Pfam PF12688 Tetratrico peptide repeat 35 153 1.6E-13 T 22-04-2016 YE1149 2f80e4c8fb051ed1af08ab6d3e3b9c12 157 Gene3D G3DSA:1.25.40.10 7 149 2.0E-19 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YE1149 2f80e4c8fb051ed1af08ab6d3e3b9c12 157 SUPERFAMILY SSF48452 9 150 9.87E-19 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YE1967 bc78b818006376e6073ce0fe59f1d8e6 103 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 94 21.78 T 22-04-2016 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 YE1967 bc78b818006376e6073ce0fe59f1d8e6 103 Pfam PF06305 Protein of unknown function (DUF1049) 23 86 4.4E-20 T 22-04-2016 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 YE1970 c0a1a8dc1513c8030c2a30e9965f9c4f 153 Pfam PF07883 Cupin domain 76 144 4.4E-13 T 22-04-2016 IPR013096 Cupin 2, conserved barrel YE1970 c0a1a8dc1513c8030c2a30e9965f9c4f 153 PANTHER PTHR10245:SF9 1 149 1.5E-42 T 22-04-2016 YE1970 c0a1a8dc1513c8030c2a30e9965f9c4f 153 Gene3D G3DSA:1.10.260.40 1 71 1.4E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE1970 c0a1a8dc1513c8030c2a30e9965f9c4f 153 SUPERFAMILY SSF51182 16 149 4.93E-30 T 22-04-2016 IPR011051 RmlC-like cupin domain YE1970 c0a1a8dc1513c8030c2a30e9965f9c4f 153 Gene3D G3DSA:2.60.120.10 72 150 1.7E-33 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YE1970 c0a1a8dc1513c8030c2a30e9965f9c4f 153 PANTHER PTHR10245 1 149 1.5E-42 T 22-04-2016 YE1970 c0a1a8dc1513c8030c2a30e9965f9c4f 153 Pfam PF01381 Helix-turn-helix 2 29 1.9E-6 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YE0144 8ca507c0ddc8627ea35e9d74b20c4a09 322 PANTHER PTHR32196 1 319 4.1E-221 T 22-04-2016 YE0144 8ca507c0ddc8627ea35e9d74b20c4a09 322 PANTHER PTHR32196:SF23 1 319 4.1E-221 T 22-04-2016 YE0144 8ca507c0ddc8627ea35e9d74b20c4a09 322 Pfam PF02653 Branched-chain amino acid transport system / permease component 38 302 5.9E-43 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YE0541 81441ff849a3bcf227734a58419cfce4 210 PANTHER PTHR28629 1 210 3.8E-80 T 22-04-2016 YE0541 81441ff849a3bcf227734a58419cfce4 210 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 9 205 2.3E-77 T 22-04-2016 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 KEGG: 00563+2.7.-.- YE0541 81441ff849a3bcf227734a58419cfce4 210 SMART SM01120 32 206 2.2E-81 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 YE0541 81441ff849a3bcf227734a58419cfce4 210 SUPERFAMILY SSF101473 3 206 3.53E-58 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 YE0541 81441ff849a3bcf227734a58419cfce4 210 Pfam PF02734 DAK2 domain 32 205 5.2E-55 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 YE2921 1d4b5ae716417e1c6d1046de8c8b01e5 111 Pfam PF07769 psiF repeat 33 65 1.6E-16 T 22-04-2016 IPR011690 Phosphate-starvation-induced PsiF repeat YE2921 1d4b5ae716417e1c6d1046de8c8b01e5 111 Pfam PF07769 psiF repeat 76 108 2.1E-19 T 22-04-2016 IPR011690 Phosphate-starvation-induced PsiF repeat YE0018 fc0ac8f29e08e9d4c35fa024304bbb5e 89 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 87 7.0E-37 T 22-04-2016 IPR009383 Protein of unknown function DUF1040 YE0018 fc0ac8f29e08e9d4c35fa024304bbb5e 89 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 5.4E-46 T 22-04-2016 IPR009383 Protein of unknown function DUF1040 YE1286 4512e1eb665643edc6c8fa9fcd01d3a6 680 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 266 669 1.1E-154 T 22-04-2016 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 YE1286 4512e1eb665643edc6c8fa9fcd01d3a6 680 SUPERFAMILY SSF54373 482 553 2.75E-5 T 22-04-2016 YE1286 4512e1eb665643edc6c8fa9fcd01d3a6 680 Gene3D G3DSA:3.50.50.60 399 481 1.6E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE1286 4512e1eb665643edc6c8fa9fcd01d3a6 680 Gene3D G3DSA:3.50.50.60 266 359 1.6E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE1286 4512e1eb665643edc6c8fa9fcd01d3a6 680 Gene3D G3DSA:3.50.50.60 575 661 1.6E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE1286 4512e1eb665643edc6c8fa9fcd01d3a6 680 PANTHER PTHR13847 610 676 1.0E-170 T 22-04-2016 YE1286 4512e1eb665643edc6c8fa9fcd01d3a6 680 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 7 664 27.95 T 22-04-2016 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 YE1286 4512e1eb665643edc6c8fa9fcd01d3a6 680 Gene3D G3DSA:3.40.50.150 11 250 4.5E-101 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE1286 4512e1eb665643edc6c8fa9fcd01d3a6 680 SUPERFAMILY SSF51905 613 669 1.49E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE1286 4512e1eb665643edc6c8fa9fcd01d3a6 680 SUPERFAMILY SSF51905 575 586 1.49E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE1286 4512e1eb665643edc6c8fa9fcd01d3a6 680 SUPERFAMILY SSF51905 266 482 1.49E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE1286 4512e1eb665643edc6c8fa9fcd01d3a6 680 PANTHER PTHR13847:SF182 226 589 1.0E-170 T 22-04-2016 YE1286 4512e1eb665643edc6c8fa9fcd01d3a6 680 PANTHER PTHR13847 226 589 1.0E-170 T 22-04-2016 YE1286 4512e1eb665643edc6c8fa9fcd01d3a6 680 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 119 244 3.8E-48 T 22-04-2016 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 YE1286 4512e1eb665643edc6c8fa9fcd01d3a6 680 PANTHER PTHR13847:SF182 610 676 1.0E-170 T 22-04-2016 YE1286 4512e1eb665643edc6c8fa9fcd01d3a6 680 Pfam PF01266 FAD dependent oxidoreductase 266 639 2.0E-50 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 YE2733 7ee545f3b55105197be473c9af20cb17 608 Gene3D G3DSA:3.30.420.40 471 605 8.4E-37 T 22-04-2016 YE2733 7ee545f3b55105197be473c9af20cb17 608 Gene3D G3DSA:3.30.420.40 298 444 2.1E-40 T 22-04-2016 YE2733 7ee545f3b55105197be473c9af20cb17 608 TIGRFAM TIGR04491 reactive_PduG: diol dehydratase reactivase alpha subunit 3 601 3.0E-289 T 22-04-2016 IPR009191 Diol dehydratase-reactivating factor alpha subunit YE2733 7ee545f3b55105197be473c9af20cb17 608 SUPERFAMILY SSF82317 93 254 3.27E-68 T 22-04-2016 IPR028975 Diol dehydratase-reactivating factor, alpha subunit, swiveling domain YE2733 7ee545f3b55105197be473c9af20cb17 608 Gene3D G3DSA:3.50.30.70 97 247 2.0E-71 T 22-04-2016 IPR028975 Diol dehydratase-reactivating factor, alpha subunit, swiveling domain YE2733 7ee545f3b55105197be473c9af20cb17 608 SUPERFAMILY SSF53067 407 600 1.58E-32 T 22-04-2016 YE2733 7ee545f3b55105197be473c9af20cb17 608 Pfam PF08841 Diol dehydratase reactivase ATPase-like domain 275 602 6.6E-162 T 22-04-2016 IPR030994 Diol dehydratase reactivase ATPase-like domain YE2733 7ee545f3b55105197be473c9af20cb17 608 SUPERFAMILY SSF53067 255 403 9.71E-70 T 22-04-2016 YE2733 7ee545f3b55105197be473c9af20cb17 608 SUPERFAMILY SSF53067 2 93 9.71E-70 T 22-04-2016 YE2733 7ee545f3b55105197be473c9af20cb17 608 PIRSF PIRSF011502 1 608 0.0 T 22-04-2016 IPR009191 Diol dehydratase-reactivating factor alpha subunit YE2163 14a772dcda7a4f7d44a35d7059e90243 457 PANTHER PTHR11206:SF153 2 446 2.6E-234 T 22-04-2016 YE2163 14a772dcda7a4f7d44a35d7059e90243 457 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 422 2.6E-120 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 YE2163 14a772dcda7a4f7d44a35d7059e90243 457 Pfam PF01554 MatE 17 177 1.0E-38 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 YE2163 14a772dcda7a4f7d44a35d7059e90243 457 Pfam PF01554 MatE 244 405 5.7E-38 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 YE2163 14a772dcda7a4f7d44a35d7059e90243 457 Hamap MF_00400 Multidrug resistance protein MdtK [mdtK]. 1 457 51.222 T 22-04-2016 IPR022913 Multidrug resistance protein MdtK YE2163 14a772dcda7a4f7d44a35d7059e90243 457 PIRSF PIRSF006603 5 456 3.4E-61 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 YE2163 14a772dcda7a4f7d44a35d7059e90243 457 PANTHER PTHR11206 2 446 2.6E-234 T 22-04-2016 YE3560 2838afd27606ac14c4e40d84e26cab42 236 Gene3D G3DSA:1.10.10.10 154 233 8.3E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3560 2838afd27606ac14c4e40d84e26cab42 236 PANTHER PTHR26402:SF458 49 231 5.1E-30 T 22-04-2016 YE3560 2838afd27606ac14c4e40d84e26cab42 236 PANTHER PTHR26402:SF458 7 33 5.1E-30 T 22-04-2016 YE3560 2838afd27606ac14c4e40d84e26cab42 236 Pfam PF00072 Response regulator receiver domain 46 147 1.7E-8 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE3560 2838afd27606ac14c4e40d84e26cab42 236 Pfam PF00196 Bacterial regulatory proteins, luxR family 176 230 5.0E-16 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE3560 2838afd27606ac14c4e40d84e26cab42 236 SUPERFAMILY SSF46894 167 234 4.42E-18 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YE3560 2838afd27606ac14c4e40d84e26cab42 236 SUPERFAMILY SSF52172 6 165 5.69E-15 T 22-04-2016 IPR011006 CheY-like superfamily YE3560 2838afd27606ac14c4e40d84e26cab42 236 SMART SM00421 174 231 7.6E-18 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE3560 2838afd27606ac14c4e40d84e26cab42 236 Gene3D G3DSA:3.40.50.2300 5 153 2.0E-30 T 22-04-2016 YE3560 2838afd27606ac14c4e40d84e26cab42 236 PANTHER PTHR26402 49 231 5.1E-30 T 22-04-2016 YE3560 2838afd27606ac14c4e40d84e26cab42 236 PANTHER PTHR26402 7 33 5.1E-30 T 22-04-2016 YE3560 2838afd27606ac14c4e40d84e26cab42 236 SMART SM00448 7 148 0.0033 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE3560 2838afd27606ac14c4e40d84e26cab42 236 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 207 219 8.6E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE3560 2838afd27606ac14c4e40d84e26cab42 236 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 191 8.6E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE3560 2838afd27606ac14c4e40d84e26cab42 236 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 191 207 8.6E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE3149 a99c05b1c91345eeb9cc831126bf8204 303 Gene3D G3DSA:3.40.50.720 1 174 2.6E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3149 a99c05b1c91345eeb9cc831126bf8204 303 Gene3D G3DSA:1.10.1040.10 175 290 4.9E-42 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 YE3149 a99c05b1c91345eeb9cc831126bf8204 303 SUPERFAMILY SSF51735 1 167 4.48E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3149 a99c05b1c91345eeb9cc831126bf8204 303 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 168 289 5.9E-34 T 22-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 YE3149 a99c05b1c91345eeb9cc831126bf8204 303 PANTHER PTHR21708 1 294 7.1E-83 T 22-04-2016 YE3149 a99c05b1c91345eeb9cc831126bf8204 303 PANTHER PTHR21708:SF24 1 294 7.1E-83 T 22-04-2016 YE3149 a99c05b1c91345eeb9cc831126bf8204 303 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 143 1.9E-23 T 22-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 YE3149 a99c05b1c91345eeb9cc831126bf8204 303 SUPERFAMILY SSF48179 168 289 9.52E-35 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 YE3149 a99c05b1c91345eeb9cc831126bf8204 303 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 291 6.0E-82 T 22-04-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 YE0844 62be16fe07bd253be5bfb7cf9aa6d2f1 182 Pfam PF05239 PRC-barrel domain 103 177 3.9E-9 T 22-04-2016 IPR027275 PRC-barrel domain YE0844 62be16fe07bd253be5bfb7cf9aa6d2f1 182 SUPERFAMILY SSF50447 13 100 1.17E-24 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain YE0844 62be16fe07bd253be5bfb7cf9aa6d2f1 182 Pfam PF01782 RimM N-terminal domain 16 96 2.8E-26 T 22-04-2016 IPR002676 RimM protein GO:0006364 YE0844 62be16fe07bd253be5bfb7cf9aa6d2f1 182 PANTHER PTHR33692 9 180 1.2E-66 T 22-04-2016 YE0844 62be16fe07bd253be5bfb7cf9aa6d2f1 182 SUPERFAMILY SSF50346 106 182 2.94E-19 T 22-04-2016 IPR011033 PRC-barrel-like YE0844 62be16fe07bd253be5bfb7cf9aa6d2f1 182 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 14 182 1.2E-60 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 YE0844 62be16fe07bd253be5bfb7cf9aa6d2f1 182 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 13 182 24.408 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 YE0844 62be16fe07bd253be5bfb7cf9aa6d2f1 182 Gene3D G3DSA:2.30.30.240 106 182 1.9E-29 T 22-04-2016 YE0844 62be16fe07bd253be5bfb7cf9aa6d2f1 182 Gene3D G3DSA:2.40.30.60 9 100 1.1E-35 T 22-04-2016 IPR002676 RimM protein GO:0006364 YE0844 62be16fe07bd253be5bfb7cf9aa6d2f1 182 PANTHER PTHR33692:SF1 9 180 1.2E-66 T 22-04-2016 YE0771 6790e35d5cdbb77381794edfac2121b5 349 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 76 89 - T 22-04-2016 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 YE0771 6790e35d5cdbb77381794edfac2121b5 349 PANTHER PTHR13326 1 340 1.1E-97 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 YE0771 6790e35d5cdbb77381794edfac2121b5 349 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 4 341 28.416 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 YE0771 6790e35d5cdbb77381794edfac2121b5 349 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 190 336 6.6E-18 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 YE0771 6790e35d5cdbb77381794edfac2121b5 349 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 8 166 6.4E-42 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 YE0771 6790e35d5cdbb77381794edfac2121b5 349 SUPERFAMILY SSF55120 2 339 1.73E-105 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 YE0771 6790e35d5cdbb77381794edfac2121b5 349 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 4 340 1.7E-80 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 YE0291 f8facbc5e9292424b37369ce5fb29ff0 260 Pfam PF00899 ThiF family 15 253 5.0E-61 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 YE0291 f8facbc5e9292424b37369ce5fb29ff0 260 PANTHER PTHR10953 1 259 1.0E-137 T 22-04-2016 YE0291 f8facbc5e9292424b37369ce5fb29ff0 260 SUPERFAMILY SSF69572 3 258 1.7E-80 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 YE0291 f8facbc5e9292424b37369ce5fb29ff0 260 PANTHER PTHR10953:SF158 1 259 1.0E-137 T 22-04-2016 YE0291 f8facbc5e9292424b37369ce5fb29ff0 260 Gene3D G3DSA:3.40.50.720 6 257 1.3E-73 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3436 921b208c982c41d05718bd1708d7554d 96 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 8 91 2.4E-30 T 22-04-2016 IPR005228 Conserved hypothetical protein CHP00251 YE3436 921b208c982c41d05718bd1708d7554d 96 PANTHER PTHR13420 10 96 3.8E-29 T 22-04-2016 YE3436 921b208c982c41d05718bd1708d7554d 96 Hamap MF_00634 UPF0235 protein YggU [yggU]. 7 93 20.142 T 22-04-2016 IPR003746 Protein of unknown function DUF167 YE3436 921b208c982c41d05718bd1708d7554d 96 SMART SM01152 7 83 4.1E-37 T 22-04-2016 IPR003746 Protein of unknown function DUF167 YE3436 921b208c982c41d05718bd1708d7554d 96 SUPERFAMILY SSF69786 9 95 8.76E-32 T 22-04-2016 IPR003746 Protein of unknown function DUF167 YE3436 921b208c982c41d05718bd1708d7554d 96 Gene3D G3DSA:3.30.1200.10 9 90 1.1E-29 T 22-04-2016 IPR003746 Protein of unknown function DUF167 YE3436 921b208c982c41d05718bd1708d7554d 96 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 11 81 5.7E-26 T 22-04-2016 IPR003746 Protein of unknown function DUF167 YE1640 77c5f2b7df9a6f3169b36b74a0ff24e9 212 Gene3D G3DSA:3.40.50.300 3 207 2.6E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1640 77c5f2b7df9a6f3169b36b74a0ff24e9 212 PANTHER PTHR10344 1 206 2.1E-74 T 22-04-2016 YE1640 77c5f2b7df9a6f3169b36b74a0ff24e9 212 Hamap MF_00165 Thymidylate kinase [tmk]. 4 206 28.578 T 22-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 YE1640 77c5f2b7df9a6f3169b36b74a0ff24e9 212 Pfam PF02223 Thymidylate kinase 8 198 4.3E-61 T 22-04-2016 YE1640 77c5f2b7df9a6f3169b36b74a0ff24e9 212 ProSitePatterns PS01331 Thymidylate kinase signature. 95 107 - T 22-04-2016 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 YE1640 77c5f2b7df9a6f3169b36b74a0ff24e9 212 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 198 5.6E-64 T 22-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 YE1640 77c5f2b7df9a6f3169b36b74a0ff24e9 212 SUPERFAMILY SSF52540 1 206 4.93E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3353 0774a4bf655c93be0d33dac760ceddf5 127 Gene3D G3DSA:1.10.10.10 14 123 1.1E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3353 0774a4bf655c93be0d33dac760ceddf5 127 Pfam PF01638 HxlR-like helix-turn-helix 32 120 3.0E-25 T 22-04-2016 IPR002577 Helix-turn-helix, HxlR type YE3353 0774a4bf655c93be0d33dac760ceddf5 127 PANTHER PTHR33204 11 124 7.0E-33 T 22-04-2016 YE3353 0774a4bf655c93be0d33dac760ceddf5 127 SUPERFAMILY SSF46785 21 123 2.85E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0120 024046175ff6786b5d60732834d8190f 254 PANTHER PTHR23342 1 253 1.9E-95 T 22-04-2016 YE0120 024046175ff6786b5d60732834d8190f 254 Hamap MF_00082_B Acetylglutamate kinase [argB]. 1 254 25.213 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YE0120 024046175ff6786b5d60732834d8190f 254 PIRSF PIRSF000728 1 254 2.5E-70 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YE0120 024046175ff6786b5d60732834d8190f 254 SUPERFAMILY SSF53633 1 252 6.55E-58 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YE0120 024046175ff6786b5d60732834d8190f 254 TIGRFAM TIGR00761 argB: acetylglutamate kinase 1 230 1.3E-71 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 YE0120 024046175ff6786b5d60732834d8190f 254 Pfam PF00696 Amino acid kinase family 1 231 2.9E-37 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YE0120 024046175ff6786b5d60732834d8190f 254 Gene3D G3DSA:3.40.1160.10 2 253 1.1E-76 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 YE2714 0e4d25928be9be8c1c32b3172e167bc9 243 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 30 235 3.0E-53 T 22-04-2016 IPR002751 Cobalamin (vitamin B12) biosynthesis CbiM family GO:0000041|GO:0016021 UniPathway: UPA00148 YE2714 0e4d25928be9be8c1c32b3172e167bc9 243 TIGRFAM TIGR00123 cbiM: cobalamin biosynthesis protein CbiM 29 237 2.1E-108 T 22-04-2016 IPR018024 Cobalamin (vitamin B12) biosynthesis protein CbiM GO:0006824|GO:0009236|GO:0016021|GO:0043190 UniPathway: UPA00148 YE2714 0e4d25928be9be8c1c32b3172e167bc9 243 PANTHER PTHR34229 30 236 7.2E-117 T 22-04-2016 YE2714 0e4d25928be9be8c1c32b3172e167bc9 243 Hamap MF_01462 Cobalt transport protein CbiM [cbiM]. 29 240 27.628 T 22-04-2016 IPR018024 Cobalamin (vitamin B12) biosynthesis protein CbiM GO:0006824|GO:0009236|GO:0016021|GO:0043190 UniPathway: UPA00148 YE2714 0e4d25928be9be8c1c32b3172e167bc9 243 PANTHER PTHR34229:SF2 30 236 7.2E-117 T 22-04-2016 YE1678 68651cfc159b13ea790b793b5c0a20e4 572 Pfam PF03237 Terminase-like family 144 554 1.7E-85 T 22-04-2016 IPR004921 Terminase, large subunit YE1678 68651cfc159b13ea790b793b5c0a20e4 572 Pfam PF06056 Putative ATPase subunit of terminase (gpP-like) 10 63 9.4E-13 T 22-04-2016 IPR010332 ATPase terminase subunit, putative GO:0005524|GO:0019069 YE1922 82f7e0a5d73990eee917b96c875f3677 95 SUPERFAMILY SSF143011 4 95 3.53E-13 T 22-04-2016 YE1922 82f7e0a5d73990eee917b96c875f3677 95 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 4 95 5.2E-18 T 22-04-2016 IPR007711 Toxin HigB-1 YE1922 82f7e0a5d73990eee917b96c875f3677 95 PANTHER PTHR40266 1 95 3.9E-17 T 22-04-2016 YE1922 82f7e0a5d73990eee917b96c875f3677 95 PANTHER PTHR40266:SF2 1 95 3.9E-17 T 22-04-2016 YE1205 1f79c6a5aad0f730e592ca1633773765 169 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 23 143 2.9E-50 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YE1205 1f79c6a5aad0f730e592ca1633773765 169 Gene3D G3DSA:2.70.70.10 14 167 9.6E-61 T 22-04-2016 YE1205 1f79c6a5aad0f730e592ca1633773765 169 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 22 146 2.2E-49 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YE1205 1f79c6a5aad0f730e592ca1633773765 169 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YE1205 1f79c6a5aad0f730e592ca1633773765 169 PANTHER PTHR30175 1 118 1.2E-57 T 22-04-2016 YE1205 1f79c6a5aad0f730e592ca1633773765 169 SUPERFAMILY SSF51261 12 167 3.84E-56 T 22-04-2016 IPR011055 Duplicated hybrid motif YE0501 ec2a9972fcfdd6d53f3902a0833a69a5 364 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 348 1.1E-118 T 22-04-2016 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 YE0501 ec2a9972fcfdd6d53f3902a0833a69a5 364 PANTHER PTHR33529 2 361 2.3E-137 T 22-04-2016 YE0501 ec2a9972fcfdd6d53f3902a0833a69a5 364 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 345 4.3E-74 T 22-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 YE0501 ec2a9972fcfdd6d53f3902a0833a69a5 364 PANTHER PTHR33529:SF2 2 361 2.3E-137 T 22-04-2016 YE4214 d7aa6d3397abd8d4088cf3dd79586b5f 206 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 13 202 28.553 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 YE4214 d7aa6d3397abd8d4088cf3dd79586b5f 206 PIRSF PIRSF003078 1 206 2.0E-61 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 YE4214 d7aa6d3397abd8d4088cf3dd79586b5f 206 PANTHER PTHR31760:SF0 1 206 8.1E-87 T 22-04-2016 YE4214 d7aa6d3397abd8d4088cf3dd79586b5f 206 PANTHER PTHR31760 1 206 8.1E-87 T 22-04-2016 YE4214 d7aa6d3397abd8d4088cf3dd79586b5f 206 Gene3D G3DSA:3.40.50.150 4 204 1.7E-72 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE4214 d7aa6d3397abd8d4088cf3dd79586b5f 206 SUPERFAMILY SSF53335 4 204 1.29E-41 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE4214 d7aa6d3397abd8d4088cf3dd79586b5f 206 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 26 204 1.1E-57 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 YE4214 d7aa6d3397abd8d4088cf3dd79586b5f 206 Pfam PF02527 rRNA small subunit methyltransferase G 20 201 7.4E-61 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 YE0873 29e5c7dff566d40168e5fe2eac8cb049 392 Pfam PF10758 Protein of unknown function (DUF2586) 3 383 1.1E-164 T 22-04-2016 IPR019694 Bacteriophage HP1, Orf23 YE0996 2f09ab784b1208411430cd09e3bffdc0 77 Gene3D G3DSA:3.10.20.280 2 71 2.8E-29 T 22-04-2016 IPR005346 RnfH protein YE0996 2f09ab784b1208411430cd09e3bffdc0 77 PANTHER PTHR37483 1 76 4.9E-32 T 22-04-2016 YE0996 2f09ab784b1208411430cd09e3bffdc0 77 PANTHER PTHR37483:SF1 1 76 4.9E-32 T 22-04-2016 YE0996 2f09ab784b1208411430cd09e3bffdc0 77 SUPERFAMILY SSF54285 2 61 2.14E-19 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp YE0996 2f09ab784b1208411430cd09e3bffdc0 77 Pfam PF03658 RnfH family Ubiquitin 2 69 1.9E-27 T 22-04-2016 IPR005346 RnfH protein YE0996 2f09ab784b1208411430cd09e3bffdc0 77 Hamap MF_00460 Protein RnfH [rnfH]. 1 77 16.616 T 22-04-2016 IPR005346 RnfH protein YE0955 c9e6480218cd3df9e243d9319a7b87d1 228 Hamap MF_01385 Urease accessory protein UreF [ureF]. 5 228 22.134 T 22-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 YE0955 c9e6480218cd3df9e243d9319a7b87d1 228 PIRSF PIRSF009467 2 228 2.9E-59 T 22-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 YE0955 c9e6480218cd3df9e243d9319a7b87d1 228 Pfam PF01730 UreF 37 185 4.0E-22 T 22-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 YE0955 c9e6480218cd3df9e243d9319a7b87d1 228 PANTHER PTHR33620 1 228 1.2E-55 T 22-04-2016 YE2214 5edbfb8a998744a33030e58f131cd728 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 22-04-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 YE2214 5edbfb8a998744a33030e58f131cd728 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 1.4E-102 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 YE2214 5edbfb8a998744a33030e58f131cd728 268 SUPERFAMILY SSF51366 1 265 4.62E-90 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 YE2214 5edbfb8a998744a33030e58f131cd728 268 Gene3D G3DSA:3.20.20.70 1 267 6.5E-97 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YE2214 5edbfb8a998744a33030e58f131cd728 268 PANTHER PTHR10314 74 131 5.3E-29 T 22-04-2016 YE2214 5edbfb8a998744a33030e58f131cd728 268 PANTHER PTHR10314 18 51 5.3E-29 T 22-04-2016 YE2214 5edbfb8a998744a33030e58f131cd728 268 Pfam PF00290 Tryptophan synthase alpha chain 8 266 1.5E-95 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 YE2214 5edbfb8a998744a33030e58f131cd728 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 37.267 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 YE2214 5edbfb8a998744a33030e58f131cd728 268 PANTHER PTHR10314:SF4 74 131 5.3E-29 T 22-04-2016 YE2214 5edbfb8a998744a33030e58f131cd728 268 PANTHER PTHR10314:SF4 18 51 5.3E-29 T 22-04-2016 YE2518 72ca86af39fcdb4ca84cbfaa3427dc53 169 Gene3D G3DSA:1.10.600.10 64 148 7.0E-5 T 22-04-2016 IPR008949 Isoprenoid synthase domain YE2518 72ca86af39fcdb4ca84cbfaa3427dc53 169 TIGRFAM TIGR03823 FliZ: flagellar regulatory protein FliZ 1 168 3.9E-99 T 22-04-2016 IPR022523 Flagellar regulator, FliZ YE2518 72ca86af39fcdb4ca84cbfaa3427dc53 169 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 91 167 1.4E-8 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 YE1416 204ea2813259b6f721de808fb0834140 513 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 YE1416 204ea2813259b6f721de808fb0834140 513 SUPERFAMILY SSF55604 9 83 4.71E-21 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YE1416 204ea2813259b6f721de808fb0834140 513 Gene3D G3DSA:3.30.1360.60 5 83 2.2E-25 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 YE1416 204ea2813259b6f721de808fb0834140 513 PANTHER PTHR30175:SF1 212 505 7.2E-129 T 22-04-2016 YE1416 204ea2813259b6f721de808fb0834140 513 PANTHER PTHR30175:SF1 1 189 7.2E-129 T 22-04-2016 YE1416 204ea2813259b6f721de808fb0834140 513 Pfam PF02378 Phosphotransferase system, EIIC 107 425 4.1E-31 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 YE1416 204ea2813259b6f721de808fb0834140 513 Pfam PF00367 phosphotransferase system, EIIB 10 43 5.8E-15 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 YE1416 204ea2813259b6f721de808fb0834140 513 PANTHER PTHR30175 212 505 7.2E-129 T 22-04-2016 YE1416 204ea2813259b6f721de808fb0834140 513 PANTHER PTHR30175 1 189 7.2E-129 T 22-04-2016 YE0094 dcbf976ba867b0d4571e9a89480b5c0a 194 Pfam PF07305 Protein of unknown function (DUF1454) 2 193 2.2E-85 T 22-04-2016 IPR009918 Protein of unknown function DUF1454 YE2465 6f84d9edcb14c54261722fb5ebc5964d 330 PIRSF PIRSF017020 1 328 4.7E-115 T 22-04-2016 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96|UniPathway: UPA00185 YE2465 6f84d9edcb14c54261722fb5ebc5964d 330 SUPERFAMILY SSF53187 1 320 2.25E-86 T 22-04-2016 YE2465 6f84d9edcb14c54261722fb5ebc5964d 330 TIGRFAM TIGR03242 arg_catab_astE: succinylglutamate desuccinylase 3 320 1.9E-136 T 22-04-2016 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96|UniPathway: UPA00185 YE2465 6f84d9edcb14c54261722fb5ebc5964d 330 PANTHER PTHR15162 1 324 1.1E-88 T 22-04-2016 YE2465 6f84d9edcb14c54261722fb5ebc5964d 330 Gene3D G3DSA:3.40.630.10 44 235 1.1E-14 T 22-04-2016 YE2465 6f84d9edcb14c54261722fb5ebc5964d 330 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 330 144.496 T 22-04-2016 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96|UniPathway: UPA00185 YE2465 6f84d9edcb14c54261722fb5ebc5964d 330 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 44 322 3.9E-60 T 22-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 YE3499 dd91a301d167c26f047021761c46cd4c 222 Pfam PF01478 Type IV leader peptidase family 83 178 1.7E-8 T 22-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 YE0193 18d2daf37cac63b3ac4e5812266e5fef 234 Pfam PF04340 Protein of unknown function, DUF484 13 231 1.7E-73 T 22-04-2016 IPR007435 Protein of unknown function DUF484 YE0193 18d2daf37cac63b3ac4e5812266e5fef 234 PANTHER PTHR38765 2 234 1.7E-92 T 22-04-2016 YE2026 f24229a8611fc7061d2e033a0185a4e9 123 Pfam PF06932 Protein of unknown function (DUF1283) 41 123 3.0E-39 T 22-04-2016 IPR009700 Protein of unknown function DUF1283 YE2026 f24229a8611fc7061d2e033a0185a4e9 123 ProDom PD073251 YNFB PERIPLASMIC SECRETED ORF9 PRECURSOR SIGNAL SIMILAR ECS2289 EXPORTED ESCHERICHIA 29 123 1.0E-43 T 22-04-2016 IPR009700 Protein of unknown function DUF1283 YE2026 f24229a8611fc7061d2e033a0185a4e9 123 Hamap MF_01581 UPF0482 protein YnfB [ynfB]. 1 123 31.468 T 22-04-2016 IPR009700 Protein of unknown function DUF1283 YE0049 25f8f0835b91b8bd41eba49d9771932c 205 Pfam PF03458 UPF0126 domain 5 79 3.8E-19 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 YE0049 25f8f0835b91b8bd41eba49d9771932c 205 Pfam PF03458 UPF0126 domain 91 164 2.4E-20 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 YE0049 25f8f0835b91b8bd41eba49d9771932c 205 PANTHER PTHR30506:SF2 1 205 1.5E-139 T 22-04-2016 YE0049 25f8f0835b91b8bd41eba49d9771932c 205 PANTHER PTHR30506 1 205 1.5E-139 T 22-04-2016 YE1866 1daba2707136ac2a518c40d6fccd2c5d 165 SUPERFAMILY SSF55781 2 151 5.02E-41 T 22-04-2016 IPR029016 GAF domain-like YE1866 1daba2707136ac2a518c40d6fccd2c5d 165 Gene3D G3DSA:3.30.450.40 2 146 3.1E-48 T 22-04-2016 IPR029016 GAF domain-like YE1866 1daba2707136ac2a518c40d6fccd2c5d 165 Pfam PF13185 GAF domain 39 148 1.7E-9 T 22-04-2016 IPR003018 GAF domain GO:0005515 YE1866 1daba2707136ac2a518c40d6fccd2c5d 165 SMART SM00065 9 161 0.0049 T 22-04-2016 IPR003018 GAF domain GO:0005515 YE1866 1daba2707136ac2a518c40d6fccd2c5d 165 PANTHER PTHR21021 3 140 2.2E-55 T 22-04-2016 YE2561 613db59e5138dab8987fadd60c7fbe7a 200 Pfam PF13144 Chaperone for flagella basal body P-ring formation 6 198 1.5E-51 T 22-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal YE2561 613db59e5138dab8987fadd60c7fbe7a 200 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 66 198 2.4E-41 T 22-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal YE2561 613db59e5138dab8987fadd60c7fbe7a 200 SMART SM00858 76 138 3.8E-11 T 22-04-2016 IPR013974 SAF domain YE2561 613db59e5138dab8987fadd60c7fbe7a 200 PANTHER PTHR36307 31 199 2.8E-29 T 22-04-2016 YE1994 d41af3f1be84c98bd00893691fb4ef6d 193 PANTHER PTHR30335:SF0 2 193 3.1E-133 T 22-04-2016 YE1994 d41af3f1be84c98bd00893691fb4ef6d 193 PANTHER PTHR30335 2 193 3.1E-133 T 22-04-2016 YE1994 d41af3f1be84c98bd00893691fb4ef6d 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 2.0E-60 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 YE1994 d41af3f1be84c98bd00893691fb4ef6d 193 PIRSF PIRSF006102 1 193 1.8E-62 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 YE1994 d41af3f1be84c98bd00893691fb4ef6d 193 Hamap MF_00459 Electron transport complex subunit RsxA [rsxA]. 2 191 26.49 T 22-04-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 YE1994 d41af3f1be84c98bd00893691fb4ef6d 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 7.0E-91 T 22-04-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 YE0260 c5b56496c9a53ff29a5a5237b1f8bb6f 218 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 140 19.836 T 22-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 YE0260 c5b56496c9a53ff29a5a5237b1f8bb6f 218 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 2.2E-32 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 YE0260 c5b56496c9a53ff29a5a5237b1f8bb6f 218 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 2.2E-32 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 YE0260 c5b56496c9a53ff29a5a5237b1f8bb6f 218 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 2.2E-32 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 YE0260 c5b56496c9a53ff29a5a5237b1f8bb6f 218 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 80 2.6E-32 T 22-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 YE0260 c5b56496c9a53ff29a5a5237b1f8bb6f 218 PANTHER PTHR33162:SF4 2 193 1.7E-75 T 22-04-2016 YE0260 c5b56496c9a53ff29a5a5237b1f8bb6f 218 PANTHER PTHR33162 2 193 1.7E-75 T 22-04-2016 YE0133 802010c10c99f7ada265a06e7a812694 310 PANTHER PTHR30346 1 310 2.0E-152 T 22-04-2016 YE0133 802010c10c99f7ada265a06e7a812694 310 Pfam PF03466 LysR substrate binding domain 88 293 1.2E-51 T 22-04-2016 IPR005119 LysR, substrate-binding YE0133 802010c10c99f7ada265a06e7a812694 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.6E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE0133 802010c10c99f7ada265a06e7a812694 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.5E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE0133 802010c10c99f7ada265a06e7a812694 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.5E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE0133 802010c10c99f7ada265a06e7a812694 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.5E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE0133 802010c10c99f7ada265a06e7a812694 310 Gene3D G3DSA:1.10.10.10 1 82 5.3E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0133 802010c10c99f7ada265a06e7a812694 310 SUPERFAMILY SSF46785 1 110 9.53E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0133 802010c10c99f7ada265a06e7a812694 310 Gene3D G3DSA:3.40.190.10 176 267 8.5E-35 T 22-04-2016 YE0133 802010c10c99f7ada265a06e7a812694 310 PANTHER PTHR30346:SF15 1 310 2.0E-152 T 22-04-2016 YE0133 802010c10c99f7ada265a06e7a812694 310 SUPERFAMILY SSF53850 89 296 1.23E-45 T 22-04-2016 YE0133 802010c10c99f7ada265a06e7a812694 310 Gene3D G3DSA:3.40.190.10 90 175 2.9E-19 T 22-04-2016 YE2175 590f54e36b975d0ccf825873a7ee07f2 367 PANTHER PTHR21716 1 366 7.5E-164 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like YE2175 590f54e36b975d0ccf825873a7ee07f2 367 PANTHER PTHR21716:SF20 1 366 7.5E-164 T 22-04-2016 YE2175 590f54e36b975d0ccf825873a7ee07f2 367 Pfam PF01594 Domain of unknown function DUF20 17 346 1.8E-50 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like YE0965 42dc0e259e6c0a10c89f53f25f207b84 344 Pfam PF00248 Aldo/keto reductase family 28 330 1.7E-74 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YE0965 42dc0e259e6c0a10c89f53f25f207b84 344 PANTHER PTHR11732:SF191 13 328 7.6E-173 T 22-04-2016 YE0965 42dc0e259e6c0a10c89f53f25f207b84 344 SUPERFAMILY SSF51430 13 330 1.13E-86 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YE0965 42dc0e259e6c0a10c89f53f25f207b84 344 PANTHER PTHR11732 13 328 7.6E-173 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta YE0965 42dc0e259e6c0a10c89f53f25f207b84 344 Gene3D G3DSA:3.20.20.100 12 329 9.1E-86 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YE2934 aed3b0e70fe9b10f92178caf17c34b97 142 TIGRFAM TIGR02801 tolR: protein TolR 13 140 4.7E-39 T 22-04-2016 IPR014168 Biopolymer transport, TolR GO:0015031|GO:0016021 YE2934 aed3b0e70fe9b10f92178caf17c34b97 142 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 141 5.3E-25 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 YE2934 aed3b0e70fe9b10f92178caf17c34b97 142 PANTHER PTHR30558 1 141 5.2E-72 T 22-04-2016 YE2934 aed3b0e70fe9b10f92178caf17c34b97 142 PANTHER PTHR30558:SF7 1 141 5.2E-72 T 22-04-2016 YE3451 8283252f65f42d6d88c2cfb2e088e93c 398 Pfam PF07514 Putative helicase 29 240 5.7E-37 T 22-04-2016 IPR011119 Uncharacterised domain, helicase/relaxase, putative YE3451 8283252f65f42d6d88c2cfb2e088e93c 398 SUPERFAMILY SSF46785 273 395 4.08E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3451 8283252f65f42d6d88c2cfb2e088e93c 398 Gene3D G3DSA:2.40.10.200 294 397 4.2E-27 T 22-04-2016 YE3451 8283252f65f42d6d88c2cfb2e088e93c 398 TIGRFAM TIGR03760 ICE_TraI_Pfluor: integrating conjugative element relaxase, PFGI-1 class 28 242 6.3E-80 T 22-04-2016 IPR022391 Integrating conjugative element relaxase, PFGI-1 class YE3451 8283252f65f42d6d88c2cfb2e088e93c 398 Pfam PF07515 Putative conjugal transfer nickase/helicase TraI C-term 278 389 3.1E-16 T 22-04-2016 IPR011093 Putative conjugal transfer nickase/helicase TraI, C-terminal YE1937 dcc620c7e7d4545bb079563021771af4 355 PANTHER PTHR34319:SF1 2 228 3.6E-80 T 22-04-2016 YE1937 dcc620c7e7d4545bb079563021771af4 355 PANTHER PTHR34319 2 228 3.6E-80 T 22-04-2016 YE3144 7b4af51523486c5669922644c25450b6 95 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 2 93 4.1E-39 T 22-04-2016 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 YE3144 7b4af51523486c5669922644c25450b6 95 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 5 78 3.1E-19 T 22-04-2016 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 YE3144 7b4af51523486c5669922644c25450b6 95 PANTHER PTHR36835 1 95 1.2E-36 T 22-04-2016 YE1365 41752eb9d0f2a968e49e7034467c0687 302 Gene3D G3DSA:3.40.50.720 5 103 1.6E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain YE1365 41752eb9d0f2a968e49e7034467c0687 302 PANTHER PTHR10996 1 300 2.8E-124 T 22-04-2016 YE1365 41752eb9d0f2a968e49e7034467c0687 302 PANTHER PTHR10996:SF152 1 300 2.8E-124 T 22-04-2016 YE1365 41752eb9d0f2a968e49e7034467c0687 302 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 11 300 2.3E-23 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 YE1365 41752eb9d0f2a968e49e7034467c0687 302 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 97 269 2.2E-48 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 YE1365 41752eb9d0f2a968e49e7034467c0687 302 Gene3D G3DSA:3.40.50.720 104 272 2.1E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain YE1365 41752eb9d0f2a968e49e7034467c0687 302 SUPERFAMILY SSF51735 89 270 4.46E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain YE1365 41752eb9d0f2a968e49e7034467c0687 302 SUPERFAMILY SSF52283 2 124 3.21E-28 T 22-04-2016 YE2753 a8c0839c72eedf44092c534ce472f5c2 340 Pfam PF02653 Branched-chain amino acid transport system / permease component 55 325 9.1E-42 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YE2753 a8c0839c72eedf44092c534ce472f5c2 340 PANTHER PTHR32196:SF35 11 335 2.4E-112 T 22-04-2016 YE2753 a8c0839c72eedf44092c534ce472f5c2 340 PANTHER PTHR32196 11 335 2.4E-112 T 22-04-2016 YE2266 581b803104cfdf0b04fee2e9fdb93f2a 133 Pfam PF13957 Toxin YafO, type II toxin-antitoxin system 33 132 2.6E-31 T 22-04-2016 IPR020353 Toxin YafO YE2266 581b803104cfdf0b04fee2e9fdb93f2a 133 ProDom PD082093 YAFO SIMILAR YAFO-LIKE UNCHARACTERIZED PROTEIN ESCHERICHIA ECS0260 COLI 9 131 3.0E-8 T 22-04-2016 IPR020353 Toxin YafO YE1013 eeafdcb5964e97be20afee451ee0052f 153 PANTHER PTHR35867:SF1 2 153 1.0E-44 T 22-04-2016 YE1013 eeafdcb5964e97be20afee451ee0052f 153 PANTHER PTHR35867 2 153 1.0E-44 T 22-04-2016 YE1013 eeafdcb5964e97be20afee451ee0052f 153 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 8 139 1.7E-34 T 22-04-2016 IPR007359 Positive regulator of sigma(E), RseC/MucC YE1013 eeafdcb5964e97be20afee451ee0052f 153 PIRSF PIRSF004923 1 151 7.0E-38 T 22-04-2016 IPR026268 Protein RseC YE3940 6b6f361178b086d692760fc3520d6b5c 602 Pfam PF00999 Sodium/hydrogen exchanger family 10 373 8.8E-66 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 YE3940 6b6f361178b086d692760fc3520d6b5c 602 PANTHER PTHR16254 1 557 3.0E-263 T 22-04-2016 YE3940 6b6f361178b086d692760fc3520d6b5c 602 SUPERFAMILY SSF51735 402 529 2.5E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3940 6b6f361178b086d692760fc3520d6b5c 602 PANTHER PTHR16254:SF6 1 557 3.0E-263 T 22-04-2016 YE3940 6b6f361178b086d692760fc3520d6b5c 602 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 14 283 1.2E-87 T 22-04-2016 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 YE3940 6b6f361178b086d692760fc3520d6b5c 602 Gene3D G3DSA:3.40.50.720 397 530 6.8E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3940 6b6f361178b086d692760fc3520d6b5c 602 Pfam PF02254 TrkA-N domain 403 513 2.6E-24 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 YE3940 6b6f361178b086d692760fc3520d6b5c 602 Hamap MF_01412 Glutathione-regulated potassium-efflux system protein KefB [kefB]. 2 599 50.364 T 22-04-2016 IPR020884 Glutathione-regulated potassium-efflux system protein KefB GO:0005886|GO:0006813|GO:0015503 YE1944 64b3d233353e9bd523dd64304b94513a 445 Pfam PF00860 Permease family 31 401 1.5E-100 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 YE1944 64b3d233353e9bd523dd64304b94513a 445 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 26 424 1.6E-114 T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 YE1944 64b3d233353e9bd523dd64304b94513a 445 PANTHER PTHR11119:SF49 19 429 9.9E-184 T 22-04-2016 YE1944 64b3d233353e9bd523dd64304b94513a 445 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 348 368 - T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 YE1944 64b3d233353e9bd523dd64304b94513a 445 PANTHER PTHR11119 19 429 9.9E-184 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 YE1944 64b3d233353e9bd523dd64304b94513a 445 TIGRFAM TIGR03616 RutG: pyrimidine utilization transport protein G 1 429 8.0E-242 T 22-04-2016 IPR019918 Pyrimidine permease RutG, predicted GO:0006864|GO:0015218 YE1006 f03b647491e293cc520751a82cee407f 218 Pfam PF12796 Ankyrin repeats (3 copies) 49 141 3.7E-8 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain YE1006 f03b647491e293cc520751a82cee407f 218 Pfam PF00023 Ankyrin repeat 144 175 0.013 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 YE1006 f03b647491e293cc520751a82cee407f 218 Gene3D G3DSA:1.25.40.20 15 180 8.1E-28 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain YE1006 f03b647491e293cc520751a82cee407f 218 SMART SM00248 43 72 340.0 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 YE1006 f03b647491e293cc520751a82cee407f 218 SMART SM00248 76 105 26.0 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 YE1006 f03b647491e293cc520751a82cee407f 218 SMART SM00248 110 139 200.0 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 YE1006 f03b647491e293cc520751a82cee407f 218 SMART SM00248 143 172 0.066 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 YE1006 f03b647491e293cc520751a82cee407f 218 PANTHER PTHR24198 46 179 1.1E-22 T 22-04-2016 YE1006 f03b647491e293cc520751a82cee407f 218 SUPERFAMILY SSF48403 15 201 3.01E-33 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain YE0250 bfeb15ecf05db7da6c04e22b4e3df440 236 Gene3D G3DSA:3.40.50.1820 1 224 1.9E-68 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE0250 bfeb15ecf05db7da6c04e22b4e3df440 236 PANTHER PTHR17630 1 224 5.3E-115 T 22-04-2016 YE0250 bfeb15ecf05db7da6c04e22b4e3df440 236 SUPERFAMILY SSF53474 1 224 2.3E-46 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE0250 bfeb15ecf05db7da6c04e22b4e3df440 236 PANTHER PTHR17630:SF42 1 224 5.3E-115 T 22-04-2016 YE0250 bfeb15ecf05db7da6c04e22b4e3df440 236 Pfam PF01738 Dienelactone hydrolase family 1 224 6.7E-72 T 22-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 YE1808 84d7a5764404b264b8e9ec00c2382290 826 SUPERFAMILY SSF53335 18 244 1.06E-26 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE1808 84d7a5764404b264b8e9ec00c2382290 826 Pfam PF07669 Eco57I restriction-modification methylase 139 231 4.6E-6 T 22-04-2016 IPR011639 Restriction modification methylase Eco57I GO:0003677|GO:0003824|GO:0006304 YE1808 84d7a5764404b264b8e9ec00c2382290 826 Pfam PF06616 BsuBI/PstI restriction endonuclease C-terminus 522 824 1.8E-124 T 22-04-2016 IPR009528 Restriction endonuclease, type II, BsuBI/PstI, C-terminal GO:0000287|GO:0003677|GO:0009036|GO:0009307 YE1808 84d7a5764404b264b8e9ec00c2382290 826 Gene3D G3DSA:3.40.50.150 27 256 3.2E-17 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE1808 84d7a5764404b264b8e9ec00c2382290 826 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 166 190 1.7E-12 T 22-04-2016 YE1808 84d7a5764404b264b8e9ec00c2382290 826 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 25 41 1.7E-12 T 22-04-2016 YE1808 84d7a5764404b264b8e9ec00c2382290 826 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 50 64 1.7E-12 T 22-04-2016 YE1808 84d7a5764404b264b8e9ec00c2382290 826 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 135 147 1.7E-12 T 22-04-2016 YE0711 a76da015d161f6dc0c90d52bf724712a 115 ProDom PD074041 YACC EXPORTED PRECURSOR SIGNAL PERIPLASMIC Y0776 SIMILAR ECS0126 STY0189 ESCHERICHIA 14 113 3.0E-39 T 22-04-2016 YE0711 a76da015d161f6dc0c90d52bf724712a 115 Pfam PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) 21 106 9.9E-10 T 22-04-2016 IPR019114 Chaperone lipoprotein, PulS/OutS-like YE1262 f20f73666967a184d5fd04c747114103 303 PANTHER PTHR30520 21 285 1.2E-153 T 22-04-2016 YE1262 f20f73666967a184d5fd04c747114103 303 PANTHER PTHR30520:SF2 21 285 1.2E-153 T 22-04-2016 YE1262 f20f73666967a184d5fd04c747114103 303 Gene3D G3DSA:1.20.1080.10 55 281 1.7E-48 T 22-04-2016 IPR023271 Aquaporin-like YE1262 f20f73666967a184d5fd04c747114103 303 Pfam PF01226 Formate/nitrite transporter 42 276 2.2E-41 T 22-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 YE0997 306422c800a6c814a97a9b1245098dda 113 Pfam PF04355 SmpA / OmlA family 35 104 4.4E-26 T 22-04-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 YE0997 306422c800a6c814a97a9b1245098dda 113 PANTHER PTHR37482 1 113 2.8E-55 T 22-04-2016 YE0997 306422c800a6c814a97a9b1245098dda 113 PANTHER PTHR37482:SF1 1 113 2.8E-55 T 22-04-2016 YE0997 306422c800a6c814a97a9b1245098dda 113 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 4 112 32.306 T 22-04-2016 IPR026592 Outer membrane protein assembly factor BamE YE0276 4c74cbbd6acc967a649e877dbf89a557 316 Gene3D G3DSA:3.40.50.300 10 316 1.8E-109 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0276 4c74cbbd6acc967a649e877dbf89a557 316 PANTHER PTHR10285 278 316 1.9E-173 T 22-04-2016 YE0276 4c74cbbd6acc967a649e877dbf89a557 316 PANTHER PTHR10285 1 262 1.9E-173 T 22-04-2016 YE0276 4c74cbbd6acc967a649e877dbf89a557 316 SUPERFAMILY SSF52540 10 315 1.41E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0276 4c74cbbd6acc967a649e877dbf89a557 316 Hamap MF_00215 Pantothenate kinase [coaA]. 1 316 189.297 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 YE0276 4c74cbbd6acc967a649e877dbf89a557 316 PANTHER PTHR10285:SF7 278 316 1.9E-173 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 YE0276 4c74cbbd6acc967a649e877dbf89a557 316 PANTHER PTHR10285:SF7 1 262 1.9E-173 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 YE0276 4c74cbbd6acc967a649e877dbf89a557 316 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 90 244 2.9E-15 T 22-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 YE0276 4c74cbbd6acc967a649e877dbf89a557 316 PIRSF PIRSF000545 1 316 2.1E-148 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 YE0276 4c74cbbd6acc967a649e877dbf89a557 316 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 10 316 2.6E-169 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 YE0229 9660bc61a74517bd5a90be8044e91017 130 SUPERFAMILY SSF55729 9 113 8.75E-12 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE0229 9660bc61a74517bd5a90be8044e91017 130 Pfam PF12568 Acetyltransferase (GNAT) domain 2 129 2.6E-52 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YE0229 9660bc61a74517bd5a90be8044e91017 130 Gene3D G3DSA:3.40.630.30 13 113 6.9E-10 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE0229 9660bc61a74517bd5a90be8044e91017 130 Hamap MF_02018 PanD maturation factor [panM]. 1 130 33.638 T 22-04-2016 IPR032900 PanD maturation factor PanM GO:0015940|GO:0031638 YE0743 c7ffbc24a46ea42cf90237d633ae3efb 443 PANTHER PTHR11061 1 440 4.1E-117 T 22-04-2016 YE0743 c7ffbc24a46ea42cf90237d633ae3efb 443 Gene3D G3DSA:2.40.50.140 2 87 2.4E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE0743 c7ffbc24a46ea42cf90237d633ae3efb 443 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 129 435 3.3E-24 T 22-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 YE0743 c7ffbc24a46ea42cf90237d633ae3efb 443 SUPERFAMILY SSF50249 2 66 6.28E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE0743 c7ffbc24a46ea42cf90237d633ae3efb 443 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 420 430 - T 22-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site YE0743 c7ffbc24a46ea42cf90237d633ae3efb 443 PANTHER PTHR11061:SF30 1 440 4.1E-117 T 22-04-2016 YE0743 c7ffbc24a46ea42cf90237d633ae3efb 443 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 24 430 8.0E-136 T 22-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 YE0743 c7ffbc24a46ea42cf90237d633ae3efb 443 Gene3D G3DSA:3.40.50.150 246 435 1.7E-57 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE0743 c7ffbc24a46ea42cf90237d633ae3efb 443 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 18 438 62.789 T 22-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 YE0743 c7ffbc24a46ea42cf90237d633ae3efb 443 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 369 399 - T 22-04-2016 IPR030390 RNA methyltransferase TrmA, active site YE0743 c7ffbc24a46ea42cf90237d633ae3efb 443 Pfam PF01938 TRAM domain 12 66 8.8E-12 T 22-04-2016 IPR002792 TRAM domain YE0743 c7ffbc24a46ea42cf90237d633ae3efb 443 SUPERFAMILY SSF53335 75 435 3.35E-81 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE1459 54230c2cfd5c9c93ca32aa0aeb1b0804 360 Gene3D G3DSA:1.10.3470.10 24 357 1.4E-97 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YE1459 54230c2cfd5c9c93ca32aa0aeb1b0804 360 PANTHER PTHR30472 3 360 4.4E-186 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 YE1459 54230c2cfd5c9c93ca32aa0aeb1b0804 360 PANTHER PTHR30472:SF25 3 360 4.4E-186 T 22-04-2016 YE1459 54230c2cfd5c9c93ca32aa0aeb1b0804 360 Pfam PF01032 FecCD transport family 43 355 1.7E-84 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 YE1459 54230c2cfd5c9c93ca32aa0aeb1b0804 360 SUPERFAMILY SSF81345 24 355 3.92E-78 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YE2909 712e07d9f10f31801fdce6721f5a2b5f 333 Hamap MF_01605 6-phosphogluconolactonase [pgl]. 1 331 57.397 T 22-04-2016 IPR022528 6-phosphogluconolactonase, YbhE-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31|UniPathway: UPA00115 YE2909 712e07d9f10f31801fdce6721f5a2b5f 333 Pfam PF10282 Lactonase, 7-bladed beta-propeller 6 327 4.8E-93 T 22-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 YE2909 712e07d9f10f31801fdce6721f5a2b5f 333 Gene3D G3DSA:2.130.10.10 2 328 2.3E-81 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 YE2909 712e07d9f10f31801fdce6721f5a2b5f 333 PANTHER PTHR30344 6 329 9.6E-101 T 22-04-2016 YE2909 712e07d9f10f31801fdce6721f5a2b5f 333 SUPERFAMILY SSF50974 4 290 5.49E-53 T 22-04-2016 IPR011045 Nitrous oxide reductase, N-terminal YE2909 712e07d9f10f31801fdce6721f5a2b5f 333 PANTHER PTHR30344:SF1 6 329 9.6E-101 T 22-04-2016 YE1700 941ab25d1516ac121ac0cef1b348298b 273 Gene3D G3DSA:3.40.192.10 25 110 1.2E-27 T 22-04-2016 YE1700 941ab25d1516ac121ac0cef1b348298b 273 SUPERFAMILY SSF51735 106 266 9.85E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain YE1700 941ab25d1516ac121ac0cef1b348298b 273 PANTHER PTHR21089:SF9 1 273 7.1E-175 T 22-04-2016 YE1700 941ab25d1516ac121ac0cef1b348298b 273 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 26 93 2.4E-15 T 22-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 YE1700 941ab25d1516ac121ac0cef1b348298b 273 SUPERFAMILY SSF53223 8 105 1.84E-25 T 22-04-2016 YE1700 941ab25d1516ac121ac0cef1b348298b 273 Gene3D G3DSA:3.40.50.720 111 267 1.3E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain YE1700 941ab25d1516ac121ac0cef1b348298b 273 PANTHER PTHR21089 1 273 7.1E-175 T 22-04-2016 YE3423 caef7aa72c4671542573cd0ca1bcf6fc 101 Pfam PF01022 Bacterial regulatory protein, arsR family 21 66 1.9E-14 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YE3423 caef7aa72c4671542573cd0ca1bcf6fc 101 PANTHER PTHR33154:SF9 1 99 6.4E-26 T 22-04-2016 YE3423 caef7aa72c4671542573cd0ca1bcf6fc 101 PANTHER PTHR33154 1 99 6.4E-26 T 22-04-2016 YE3423 caef7aa72c4671542573cd0ca1bcf6fc 101 Gene3D G3DSA:1.10.10.10 4 95 2.4E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3423 caef7aa72c4671542573cd0ca1bcf6fc 101 SMART SM00418 13 91 1.9E-27 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YE3423 caef7aa72c4671542573cd0ca1bcf6fc 101 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 47 62 4.6E-12 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YE3423 caef7aa72c4671542573cd0ca1bcf6fc 101 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 62 77 4.6E-12 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YE3423 caef7aa72c4671542573cd0ca1bcf6fc 101 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 15 30 4.6E-12 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 YE3423 caef7aa72c4671542573cd0ca1bcf6fc 101 SUPERFAMILY SSF46785 9 95 4.68E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2100 cb0995569a6720d2379dd76f919934e6 219 PRINTS PR01837 MgtC/SapB protein signature 12 31 1.7E-47 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 YE2100 cb0995569a6720d2379dd76f919934e6 219 PRINTS PR01837 MgtC/SapB protein signature 31 49 1.7E-47 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 YE2100 cb0995569a6720d2379dd76f919934e6 219 PRINTS PR01837 MgtC/SapB protein signature 65 87 1.7E-47 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 YE2100 cb0995569a6720d2379dd76f919934e6 219 PRINTS PR01837 MgtC/SapB protein signature 92 116 1.7E-47 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 YE2100 cb0995569a6720d2379dd76f919934e6 219 Pfam PF02308 MgtC family 10 138 2.6E-40 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 YE2100 cb0995569a6720d2379dd76f919934e6 219 PANTHER PTHR33778 1 164 1.6E-61 T 22-04-2016 YE0536 cd1865c13d96f2905746f0011ed51d85 360 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 247 6.2E-16 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YE0536 cd1865c13d96f2905746f0011ed51d85 360 Gene3D G3DSA:2.40.50.100 151 182 7.5E-15 T 22-04-2016 YE0536 cd1865c13d96f2905746f0011ed51d85 360 Gene3D G3DSA:2.40.50.100 59 90 7.5E-15 T 22-04-2016 YE0536 cd1865c13d96f2905746f0011ed51d85 360 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 32 354 5.7E-97 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 YE0536 cd1865c13d96f2905746f0011ed51d85 360 PANTHER PTHR30469 6 352 1.3E-137 T 22-04-2016 YE0536 cd1865c13d96f2905746f0011ed51d85 360 PANTHER PTHR30469:SF10 6 352 1.3E-137 T 22-04-2016 YE0536 cd1865c13d96f2905746f0011ed51d85 360 SUPERFAMILY SSF111369 48 206 1.26E-23 T 22-04-2016 YE2037 f7fe60f8f85a097f8f3a61a4a40734db 448 SUPERFAMILY SSF63829 93 113 1.37E-5 T 22-04-2016 YE2037 f7fe60f8f85a097f8f3a61a4a40734db 448 SUPERFAMILY SSF63829 242 294 1.37E-5 T 22-04-2016 YE2037 f7fe60f8f85a097f8f3a61a4a40734db 448 SUPERFAMILY SSF63829 145 210 1.37E-5 T 22-04-2016 YE2037 f7fe60f8f85a097f8f3a61a4a40734db 448 Pfam PF13449 Esterase-like activity of phytase 90 421 7.6E-67 T 22-04-2016 IPR027372 Phytase-like domain YE2037 f7fe60f8f85a097f8f3a61a4a40734db 448 PANTHER PTHR37957 1 446 1.6E-169 T 22-04-2016 YE3842 b31e6e79932350d3d61bf1093fa894fb 100 SMART SM00530 15 70 5.1E-8 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YE3842 b31e6e79932350d3d61bf1093fa894fb 100 Pfam PF01381 Helix-turn-helix 20 67 8.2E-12 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YE3842 b31e6e79932350d3d61bf1093fa894fb 100 SUPERFAMILY SSF47413 7 67 2.17E-13 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE3842 b31e6e79932350d3d61bf1093fa894fb 100 Gene3D G3DSA:1.10.260.40 11 68 4.8E-13 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE1458 243c43a6c3ca1aaba318d96c23661b38 508 PANTHER PTHR11785 11 503 1.6E-238 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YE1458 243c43a6c3ca1aaba318d96c23661b38 508 PANTHER PTHR11785:SF204 11 503 1.6E-238 T 22-04-2016 YE1458 243c43a6c3ca1aaba318d96c23661b38 508 Pfam PF00324 Amino acid permease 25 478 1.8E-142 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 YE1458 243c43a6c3ca1aaba318d96c23661b38 508 ProSitePatterns PS00218 Amino acid permeases signature. 50 81 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 YE1458 243c43a6c3ca1aaba318d96c23661b38 508 PIRSF PIRSF006060 3 497 3.0E-82 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YE3196 dec17485f5f86aa71ab5b8a5716f1b57 2874 SMART SM01068 2079 2144 2.0E-34 T 22-04-2016 IPR009342 Putative carbohydrate binding domain YE3196 dec17485f5f86aa71ab5b8a5716f1b57 2874 SMART SM01068 1543 1604 1.3E-20 T 22-04-2016 IPR009342 Putative carbohydrate binding domain YE3196 dec17485f5f86aa71ab5b8a5716f1b57 2874 Gene3D G3DSA:2.60.420.10 2791 2865 1.5E-10 T 22-04-2016 YE3196 dec17485f5f86aa71ab5b8a5716f1b57 2874 SUPERFAMILY SSF74650 2079 2343 3.45E-85 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 YE3196 dec17485f5f86aa71ab5b8a5716f1b57 2874 SUPERFAMILY SSF74650 1557 1817 6.59E-74 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 YE3196 dec17485f5f86aa71ab5b8a5716f1b57 2874 PANTHER PTHR37469:SF2 1784 2851 0.0 T 22-04-2016 YE3196 dec17485f5f86aa71ab5b8a5716f1b57 2874 PANTHER PTHR37469:SF2 86 1768 0.0 T 22-04-2016 YE3196 dec17485f5f86aa71ab5b8a5716f1b57 2874 Gene3D G3DSA:2.70.98.40 2080 2401 8.3E-94 T 22-04-2016 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 YE3196 dec17485f5f86aa71ab5b8a5716f1b57 2874 Gene3D G3DSA:2.70.98.40 1557 1850 1.6E-89 T 22-04-2016 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 YE3196 dec17485f5f86aa71ab5b8a5716f1b57 2874 PANTHER PTHR37469 1784 2851 0.0 T 22-04-2016 YE3196 dec17485f5f86aa71ab5b8a5716f1b57 2874 PANTHER PTHR37469 86 1768 0.0 T 22-04-2016 YE3196 dec17485f5f86aa71ab5b8a5716f1b57 2874 Pfam PF06165 Glycosyltransferase family 36 2102 2342 6.2E-77 T 22-04-2016 IPR010383 Glycosyl hydrolase 94 YE3196 dec17485f5f86aa71ab5b8a5716f1b57 2874 Pfam PF06165 Glycosyltransferase family 36 1567 1814 1.1E-67 T 22-04-2016 IPR010383 Glycosyl hydrolase 94 YE3196 dec17485f5f86aa71ab5b8a5716f1b57 2874 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 2372 2798 1.7E-122 T 22-04-2016 IPR033432 Glycosyl hydrolase 36, catalytic domain YE3196 dec17485f5f86aa71ab5b8a5716f1b57 2874 SUPERFAMILY SSF48208 2359 2870 1.84E-96 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 YE3196 dec17485f5f86aa71ab5b8a5716f1b57 2874 Pfam PF10091 Putative glucoamylase 1308 1514 1.5E-13 T 22-04-2016 IPR019282 Domain of unknown function DUF2329 YE3565 e3163e3759f8dec94389c81154a86264 658 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 48 602 1.5E-158 T 22-04-2016 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 YE3565 e3163e3759f8dec94389c81154a86264 658 PANTHER PTHR30332:SF3 1 658 4.7E-229 T 22-04-2016 YE3565 e3163e3759f8dec94389c81154a86264 658 PANTHER PTHR30332 1 658 4.7E-229 T 22-04-2016 YE3565 e3163e3759f8dec94389c81154a86264 658 PRINTS PR00811 Bacterial general secretion pathway protein D signature 360 370 1.4E-40 T 22-04-2016 IPR001775 GspD/PilQ family YE3565 e3163e3759f8dec94389c81154a86264 658 PRINTS PR00811 Bacterial general secretion pathway protein D signature 584 598 1.4E-40 T 22-04-2016 IPR001775 GspD/PilQ family YE3565 e3163e3759f8dec94389c81154a86264 658 PRINTS PR00811 Bacterial general secretion pathway protein D signature 561 579 1.4E-40 T 22-04-2016 IPR001775 GspD/PilQ family YE3565 e3163e3759f8dec94389c81154a86264 658 PRINTS PR00811 Bacterial general secretion pathway protein D signature 463 473 1.4E-40 T 22-04-2016 IPR001775 GspD/PilQ family YE3565 e3163e3759f8dec94389c81154a86264 658 PRINTS PR00811 Bacterial general secretion pathway protein D signature 428 452 1.4E-40 T 22-04-2016 IPR001775 GspD/PilQ family YE3565 e3163e3759f8dec94389c81154a86264 658 Pfam PF00263 Bacterial type II and III secretion system protein 432 597 1.5E-46 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 YE3565 e3163e3759f8dec94389c81154a86264 658 Pfam PF03958 Bacterial type II/III secretion system short domain 283 360 3.4E-15 T 22-04-2016 IPR005644 NolW-like YE3565 e3163e3759f8dec94389c81154a86264 658 Pfam PF03958 Bacterial type II/III secretion system short domain 145 207 1.6E-8 T 22-04-2016 IPR005644 NolW-like YE3565 e3163e3759f8dec94389c81154a86264 658 Pfam PF03958 Bacterial type II/III secretion system short domain 209 277 3.8E-12 T 22-04-2016 IPR005644 NolW-like YE0585 359475905521972ad0623ea6cb55d331 169 Gene3D G3DSA:3.30.1330.60 52 167 1.5E-31 T 22-04-2016 IPR006665 OmpA-like domain YE0585 359475905521972ad0623ea6cb55d331 169 PANTHER PTHR30128:SF12 5 166 6.0E-90 T 22-04-2016 YE0585 359475905521972ad0623ea6cb55d331 169 PRINTS PR01021 OMPA domain signature 111 127 3.0E-10 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YE0585 359475905521972ad0623ea6cb55d331 169 PRINTS PR01021 OMPA domain signature 66 88 3.0E-10 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YE0585 359475905521972ad0623ea6cb55d331 169 PRINTS PR01021 OMPA domain signature 96 111 3.0E-10 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 YE0585 359475905521972ad0623ea6cb55d331 169 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 111 128 8.1E-8 T 22-04-2016 YE0585 359475905521972ad0623ea6cb55d331 169 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 129 148 8.1E-8 T 22-04-2016 YE0585 359475905521972ad0623ea6cb55d331 169 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 149 169 8.1E-8 T 22-04-2016 YE0585 359475905521972ad0623ea6cb55d331 169 PANTHER PTHR30128 5 166 6.0E-90 T 22-04-2016 YE0585 359475905521972ad0623ea6cb55d331 169 Pfam PF00691 OmpA family 66 160 1.8E-16 T 22-04-2016 IPR006665 OmpA-like domain YE0585 359475905521972ad0623ea6cb55d331 169 SUPERFAMILY SSF103088 52 166 3.01E-31 T 22-04-2016 IPR006665 OmpA-like domain YE3299 61d8fe21e041c14a7559fde7cc172d5f 131 PANTHER PTHR10584:SF191 6 67 6.3E-22 T 22-04-2016 YE3299 61d8fe21e041c14a7559fde7cc172d5f 131 Pfam PF04241 Protein of unknown function (DUF423) 20 106 5.4E-24 T 22-04-2016 IPR006696 Protein of unknown function DUF423 YE3299 61d8fe21e041c14a7559fde7cc172d5f 131 PANTHER PTHR10584 6 67 6.3E-22 T 22-04-2016 YE3041 67675123972bcea8d6833650877dfb00 130 Pfam PF13333 Integrase core domain 73 129 3.4E-21 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YE3041 67675123972bcea8d6833650877dfb00 130 PANTHER PTHR32552:SF34 1 129 3.6E-40 T 22-04-2016 YE3041 67675123972bcea8d6833650877dfb00 130 SUPERFAMILY SSF53098 38 129 2.28E-10 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE3041 67675123972bcea8d6833650877dfb00 130 PANTHER PTHR32552 1 129 3.6E-40 T 22-04-2016 YE3041 67675123972bcea8d6833650877dfb00 130 Gene3D G3DSA:3.30.420.10 44 121 4.1E-7 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE1023 6dacd2181a3d99219a174921de7d5914 447 PIRSF PIRSF002746 1 447 7.0E-143 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 YE1023 6dacd2181a3d99219a174921de7d5914 447 PANTHER PTHR30354 1 447 0.0 T 22-04-2016 YE1023 6dacd2181a3d99219a174921de7d5914 447 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 5 447 5.9E-172 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 YE1023 6dacd2181a3d99219a174921de7d5914 447 Pfam PF02447 GntP family permease 4 445 2.5E-159 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 YE1023 6dacd2181a3d99219a174921de7d5914 447 PANTHER PTHR30354:SF5 1 447 0.0 T 22-04-2016 YE2361 6744617800dabc3b67aaf98201e2e875 286 PANTHER PTHR12829:SF4 4 198 7.0E-13 T 22-04-2016 YE2361 6744617800dabc3b67aaf98201e2e875 286 Pfam PF05063 MT-A70 119 196 6.4E-10 T 22-04-2016 IPR007757 MT-A70-like GO:0006139|GO:0008168 YE2361 6744617800dabc3b67aaf98201e2e875 286 Pfam PF05063 MT-A70 4 91 2.9E-13 T 22-04-2016 IPR007757 MT-A70-like GO:0006139|GO:0008168 YE2361 6744617800dabc3b67aaf98201e2e875 286 SUPERFAMILY SSF53335 4 91 2.02E-6 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE2361 6744617800dabc3b67aaf98201e2e875 286 PANTHER PTHR12829 4 198 7.0E-13 T 22-04-2016 YE0030 b4278482caf8e9622fb853ea999887a4 195 Gene3D G3DSA:1.10.150.240 16 76 3.2E-33 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 YE0030 b4278482caf8e9622fb853ea999887a4 195 PANTHER PTHR12725 4 188 4.8E-50 T 22-04-2016 YE0030 b4278482caf8e9622fb853ea999887a4 195 PANTHER PTHR12725:SF63 4 188 4.8E-50 T 22-04-2016 YE0030 b4278482caf8e9622fb853ea999887a4 195 Gene3D G3DSA:3.40.50.1000 77 192 3.2E-30 T 22-04-2016 IPR023214 HAD-like domain YE0030 b4278482caf8e9622fb853ea999887a4 195 SUPERFAMILY SSF56784 3 189 4.44E-40 T 22-04-2016 IPR023214 HAD-like domain YE0030 b4278482caf8e9622fb853ea999887a4 195 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 55 184 5.0E-16 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 YE0030 b4278482caf8e9622fb853ea999887a4 195 Pfam PF13419 Haloacid dehalogenase-like hydrolase 53 182 8.5E-8 T 22-04-2016 IPR023214 HAD-like domain YE3575 a18cbd7379789ab301e488e9e9b42f8c 133 Pfam PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) 17 121 1.4E-27 T 22-04-2016 IPR019114 Chaperone lipoprotein, PulS/OutS-like YE0549 07adb36f0e5420ff0b35f6ba9ab25686 361 Pfam PF01095 Pectinesterase 30 268 1.2E-35 T 22-04-2016 IPR000070 Pectinesterase, catalytic GO:0005618|GO:0030599|GO:0042545 KEGG: 00040+3.1.1.11|KEGG: 00500+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248|UniPathway: UPA00545 YE0549 07adb36f0e5420ff0b35f6ba9ab25686 361 PANTHER PTHR31321:SF1 285 358 1.9E-88 T 22-04-2016 YE0549 07adb36f0e5420ff0b35f6ba9ab25686 361 PANTHER PTHR31321:SF1 26 268 1.9E-88 T 22-04-2016 YE0549 07adb36f0e5420ff0b35f6ba9ab25686 361 PANTHER PTHR31321 285 358 1.9E-88 T 22-04-2016 YE0549 07adb36f0e5420ff0b35f6ba9ab25686 361 PANTHER PTHR31321 26 268 1.9E-88 T 22-04-2016 YE0549 07adb36f0e5420ff0b35f6ba9ab25686 361 SUPERFAMILY SSF51126 26 356 2.72E-62 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YE0549 07adb36f0e5420ff0b35f6ba9ab25686 361 Gene3D G3DSA:2.160.20.10 26 358 2.8E-95 T 22-04-2016 IPR012334 Pectin lyase fold YE2499 d7e0f872d079692b43e4a4ae8986f153 546 Pfam PF07690 Major Facilitator Superfamily 23 430 1.9E-37 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YE2499 d7e0f872d079692b43e4a4ae8986f153 546 Gene3D G3DSA:1.20.1250.20 505 532 8.3E-17 T 22-04-2016 YE2499 d7e0f872d079692b43e4a4ae8986f153 546 Gene3D G3DSA:1.20.1250.20 290 441 8.3E-17 T 22-04-2016 YE2499 d7e0f872d079692b43e4a4ae8986f153 546 Gene3D G3DSA:1.20.1250.20 21 197 5.6E-17 T 22-04-2016 YE2499 d7e0f872d079692b43e4a4ae8986f153 546 PANTHER PTHR23501 1 546 3.5E-214 T 22-04-2016 YE2499 d7e0f872d079692b43e4a4ae8986f153 546 PANTHER PTHR23501:SF88 1 546 3.5E-214 T 22-04-2016 YE2499 d7e0f872d079692b43e4a4ae8986f153 546 SUPERFAMILY SSF103473 268 440 1.83E-44 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE2499 d7e0f872d079692b43e4a4ae8986f153 546 SUPERFAMILY SSF103473 15 199 1.83E-44 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE2499 d7e0f872d079692b43e4a4ae8986f153 546 SUPERFAMILY SSF103473 504 520 1.83E-44 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE1167 701fe1e788ff2207a4d890bbded0db56 152 PANTHER PTHR35146 1 152 5.6E-63 T 22-04-2016 YE1167 701fe1e788ff2207a4d890bbded0db56 152 PANTHER PTHR35146:SF1 1 152 5.6E-63 T 22-04-2016 YE1167 701fe1e788ff2207a4d890bbded0db56 152 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 31.842 T 22-04-2016 IPR003791 Protein of unknown function UPF0178 YE1167 701fe1e788ff2207a4d890bbded0db56 152 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 18 145 1.3E-50 T 22-04-2016 IPR003791 Protein of unknown function UPF0178 YE2070 e0d2863cbd488fc4ba3273494f5e41c2 157 PANTHER PTHR40055 1 157 1.5E-24 T 22-04-2016 YE2070 e0d2863cbd488fc4ba3273494f5e41c2 157 Hamap MF_01896 DNA gyrase inhibitor [sbmC]. 1 156 38.134 T 22-04-2016 IPR024911 DNA gyrase inhibitor GyrI GO:0008657 YE2070 e0d2863cbd488fc4ba3273494f5e41c2 157 SMART SM00871 1 154 8.3E-34 T 22-04-2016 IPR010499 Bacterial transcription activator, effector binding YE2070 e0d2863cbd488fc4ba3273494f5e41c2 157 Pfam PF06445 GyrI-like small molecule binding domain 1 150 3.2E-27 T 22-04-2016 IPR029442 GyrI-like small molecule binding domain YE2070 e0d2863cbd488fc4ba3273494f5e41c2 157 Gene3D G3DSA:3.20.80.10 1 155 5.8E-44 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain YE2070 e0d2863cbd488fc4ba3273494f5e41c2 157 PANTHER PTHR40055:SF2 1 157 1.5E-24 T 22-04-2016 YE2070 e0d2863cbd488fc4ba3273494f5e41c2 157 SUPERFAMILY SSF55136 1 155 7.32E-36 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain YE1003 df36712b86b3acb7367d5e26c9f1e340 127 ProSitePatterns PS00850 Glycine radical domain signature. 97 105 - T 22-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site YE1003 df36712b86b3acb7367d5e26c9f1e340 127 PIRSF PIRSF000378 2 127 2.9E-55 T 22-04-2016 IPR011140 Autonomous glycyl radical cofactor GrcA YE1003 df36712b86b3acb7367d5e26c9f1e340 127 PANTHER PTHR30191:SF5 1 127 4.6E-103 T 22-04-2016 YE1003 df36712b86b3acb7367d5e26c9f1e340 127 Pfam PF01228 Glycine radical 14 108 1.5E-23 T 22-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 YE1003 df36712b86b3acb7367d5e26c9f1e340 127 Gene3D G3DSA:3.20.70.20 27 126 2.8E-37 T 22-04-2016 YE1003 df36712b86b3acb7367d5e26c9f1e340 127 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 127 1.2E-72 T 22-04-2016 IPR011140 Autonomous glycyl radical cofactor GrcA YE1003 df36712b86b3acb7367d5e26c9f1e340 127 Hamap MF_00806 Autonomous glycyl radical cofactor [grcA]. 1 127 43.282 T 22-04-2016 IPR011140 Autonomous glycyl radical cofactor GrcA YE1003 df36712b86b3acb7367d5e26c9f1e340 127 PANTHER PTHR30191 1 127 4.6E-103 T 22-04-2016 YE1003 df36712b86b3acb7367d5e26c9f1e340 127 SUPERFAMILY SSF51998 27 125 7.78E-25 T 22-04-2016 YE0960 86193d04af947253ff1eb024543a2106 110 Gene3D G3DSA:1.10.890.10 27 97 2.2E-12 T 22-04-2016 IPR010486 HNS-dependent expression A/B YE0960 86193d04af947253ff1eb024543a2106 110 Hamap MF_00947 Acid stress chaperone HdeB [hdeB]. 2 103 28.404 T 22-04-2016 IPR028623 HNS-dependent expression B GO:0009268|GO:0051082 YE0960 86193d04af947253ff1eb024543a2106 110 Pfam PF06411 HdeA/HdeB family 10 96 4.2E-24 T 22-04-2016 IPR010486 HNS-dependent expression A/B YE0960 86193d04af947253ff1eb024543a2106 110 SUPERFAMILY SSF47752 35 95 2.75E-5 T 22-04-2016 IPR024972 HNS-dependent expression A GO:0030288|GO:0071468 YE0960 86193d04af947253ff1eb024543a2106 110 ProDom PD070929 HDEB PRECURSOR SIGNAL EXPORTED PERIPLASMIC SECRETED ECS4389 10K-L SEQUENCING DIRECT 36 104 2.0E-33 T 22-04-2016 YE1267 5db5b960bfb98b8b36e4d46c69a3a850 164 Pfam PF03100 CcmE 4 137 2.7E-45 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 YE1267 5db5b960bfb98b8b36e4d46c69a3a850 164 PANTHER PTHR34128:SF1 2 162 7.9E-77 T 22-04-2016 YE1267 5db5b960bfb98b8b36e4d46c69a3a850 164 SUPERFAMILY SSF82093 30 143 5.1E-41 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 YE1267 5db5b960bfb98b8b36e4d46c69a3a850 164 PANTHER PTHR34128 2 162 7.9E-77 T 22-04-2016 YE1267 5db5b960bfb98b8b36e4d46c69a3a850 164 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 147 32.371 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 YE1267 5db5b960bfb98b8b36e4d46c69a3a850 164 Gene3D G3DSA:2.40.50.140 26 131 2.6E-41 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE2822 8fa8701ad2cf84278229e717cbd6ae73 280 SUPERFAMILY SSF53474 5 278 1.54E-87 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE2822 8fa8701ad2cf84278229e717cbd6ae73 280 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 6 276 2.6E-119 T 22-04-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801 YE2822 8fa8701ad2cf84278229e717cbd6ae73 280 PANTHER PTHR10061 4 280 8.1E-175 T 22-04-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801 YE2822 8fa8701ad2cf84278229e717cbd6ae73 280 Pfam PF00756 Putative esterase 26 261 6.9E-66 T 22-04-2016 IPR000801 Putative esterase YE2822 8fa8701ad2cf84278229e717cbd6ae73 280 Gene3D G3DSA:3.40.50.1820 5 278 1.2E-75 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE0223 5ce9ecf921f181dc66d7f50e6d2439bd 90 PANTHER PTHR38775 1 90 1.6E-30 T 22-04-2016 YE0223 5ce9ecf921f181dc66d7f50e6d2439bd 90 PANTHER PTHR38775:SF1 1 90 1.6E-30 T 22-04-2016 YE0223 5ce9ecf921f181dc66d7f50e6d2439bd 90 Pfam PF06611 Protein of unknown function (DUF1145) 1 58 1.4E-27 T 22-04-2016 IPR009525 Protein of unknown function DUF1145 YE1118 b90030edfa9fc9ee793b556c4c493c87 63 Pfam PF11119 Protein of unknown function (DUF2633) 1 57 1.9E-31 T 22-04-2016 IPR022576 Protein of unknown function DUF2633 YE1118 b90030edfa9fc9ee793b556c4c493c87 63 ProDom PD053432 MEMBRANE TRANSMEMBRANE YFGG INNER EXPORTED Y1396 PRECURSOR SIGNAL 2 50 1.0E-15 T 22-04-2016 IPR022576 Protein of unknown function DUF2633 YE2709 d8ab9093a02fb1bb568ca32b8b22812e 248 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 248 44.873 T 22-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 YE2709 d8ab9093a02fb1bb568ca32b8b22812e 248 PANTHER PTHR34148:SF1 1 248 1.1E-52 T 22-04-2016 YE2709 d8ab9093a02fb1bb568ca32b8b22812e 248 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 5 247 1.2E-60 T 22-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 YE2709 d8ab9093a02fb1bb568ca32b8b22812e 248 Pfam PF02654 Cobalamin-5-phosphate synthase 10 245 8.2E-51 T 22-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 YE2709 d8ab9093a02fb1bb568ca32b8b22812e 248 PANTHER PTHR34148 1 248 1.1E-52 T 22-04-2016 YE0656 56b0dd78b69943aceccda1485838ecbc 599 PANTHER PTHR24096:SF193 10 599 1.3E-220 T 22-04-2016 YE0656 56b0dd78b69943aceccda1485838ecbc 599 Pfam PF00501 AMP-binding enzyme 15 468 6.4E-95 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 YE0656 56b0dd78b69943aceccda1485838ecbc 599 Gene3D G3DSA:2.30.38.10 398 459 5.5E-21 T 22-04-2016 YE0656 56b0dd78b69943aceccda1485838ecbc 599 SUPERFAMILY SSF56801 9 287 2.35E-113 T 22-04-2016 YE0656 56b0dd78b69943aceccda1485838ecbc 599 SUPERFAMILY SSF56801 338 597 2.35E-113 T 22-04-2016 YE0656 56b0dd78b69943aceccda1485838ecbc 599 PANTHER PTHR24096 10 599 1.3E-220 T 22-04-2016 YE0656 56b0dd78b69943aceccda1485838ecbc 599 ProSitePatterns PS00455 Putative AMP-binding domain signature. 185 196 - T 22-04-2016 IPR020845 AMP-binding, conserved site YE0656 56b0dd78b69943aceccda1485838ecbc 599 Gene3D G3DSA:3.40.50.980 335 397 4.7E-31 T 22-04-2016 YE0656 56b0dd78b69943aceccda1485838ecbc 599 Gene3D G3DSA:3.40.50.980 192 282 4.7E-31 T 22-04-2016 YE0656 56b0dd78b69943aceccda1485838ecbc 599 Gene3D G3DSA:3.40.50.980 10 191 2.2E-30 T 22-04-2016 YE3212 170a508dcc31ff405a301aa2062aea7b 316 PANTHER PTHR23344 28 313 1.8E-115 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 YE3212 170a508dcc31ff405a301aa2062aea7b 316 Gene3D G3DSA:3.20.20.190 10 314 2.8E-55 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 YE3212 170a508dcc31ff405a301aa2062aea7b 316 SUPERFAMILY SSF51695 30 311 3.14E-47 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 YE3212 170a508dcc31ff405a301aa2062aea7b 316 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 36 305 2.4E-19 T 22-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 YE3212 170a508dcc31ff405a301aa2062aea7b 316 PANTHER PTHR23344:SF2 28 313 1.8E-115 T 22-04-2016 YE3184 99c3a1bf8e9aae99bc3281e434857214 1229 Gene3D G3DSA:3.40.50.300 1 163 5.0E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3184 99c3a1bf8e9aae99bc3281e434857214 1229 PANTHER PTHR32114:SF2 2 488 9.2E-111 T 22-04-2016 YE3184 99c3a1bf8e9aae99bc3281e434857214 1229 PANTHER PTHR32114:SF2 507 731 9.2E-111 T 22-04-2016 YE3184 99c3a1bf8e9aae99bc3281e434857214 1229 PANTHER PTHR32114:SF2 817 1224 9.2E-111 T 22-04-2016 YE3184 99c3a1bf8e9aae99bc3281e434857214 1229 PANTHER PTHR32114 2 488 9.2E-111 T 22-04-2016 IPR027050 Nuclease SbcCD subunit C GO:0004518|GO:0006281 YE3184 99c3a1bf8e9aae99bc3281e434857214 1229 PANTHER PTHR32114 507 731 9.2E-111 T 22-04-2016 IPR027050 Nuclease SbcCD subunit C GO:0004518|GO:0006281 YE3184 99c3a1bf8e9aae99bc3281e434857214 1229 PANTHER PTHR32114 817 1224 9.2E-111 T 22-04-2016 IPR027050 Nuclease SbcCD subunit C GO:0004518|GO:0006281 YE3184 99c3a1bf8e9aae99bc3281e434857214 1229 SUPERFAMILY SSF52540 26 227 9.37E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3184 99c3a1bf8e9aae99bc3281e434857214 1229 SUPERFAMILY SSF52540 1117 1199 9.37E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3184 99c3a1bf8e9aae99bc3281e434857214 1229 Gene3D G3DSA:3.40.50.300 1113 1201 8.8E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3184 99c3a1bf8e9aae99bc3281e434857214 1229 Pfam PF13476 AAA domain 5 205 1.2E-27 T 22-04-2016 YE3184 99c3a1bf8e9aae99bc3281e434857214 1229 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1111 1181 2.9E-15 T 22-04-2016 YE3340 1b6d5cf2eed6b7ca593aa06b3b51c666 219 SMART SM00862 22 95 1.3E-13 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YE3340 1b6d5cf2eed6b7ca593aa06b3b51c666 219 PANTHER PTHR26402:SF589 3 93 1.0E-27 T 22-04-2016 YE3340 1b6d5cf2eed6b7ca593aa06b3b51c666 219 SUPERFAMILY SSF46894 4 96 9.64E-18 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YE3340 1b6d5cf2eed6b7ca593aa06b3b51c666 219 Gene3D G3DSA:1.10.10.10 6 97 3.8E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3340 1b6d5cf2eed6b7ca593aa06b3b51c666 219 PANTHER PTHR26402 3 93 1.0E-27 T 22-04-2016 YE3340 1b6d5cf2eed6b7ca593aa06b3b51c666 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 24 95 3.7E-17 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YE1949 347db19304a85dd5c41d919a7a9d5183 230 PANTHER PTHR11080 1 218 6.6E-80 T 22-04-2016 YE1949 347db19304a85dd5c41d919a7a9d5183 230 TIGRFAM TIGR03614 RutB: pyrimidine utilization protein B 2 225 6.3E-131 T 22-04-2016 IPR019916 Isochorismatase, RutB GO:0016811 KEGG: 00240+3.5.1.110|KEGG: 00311+3.5.1.11 YE1949 347db19304a85dd5c41d919a7a9d5183 230 Pfam PF00857 Isochorismatase family 17 214 2.0E-41 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 YE1949 347db19304a85dd5c41d919a7a9d5183 230 Hamap MF_00830 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB [rutB]. 1 227 60.1 T 22-04-2016 IPR019916 Isochorismatase, RutB GO:0016811 KEGG: 00240+3.5.1.110|KEGG: 00311+3.5.1.11 YE1949 347db19304a85dd5c41d919a7a9d5183 230 SUPERFAMILY SSF52499 5 220 3.79E-54 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 YE1949 347db19304a85dd5c41d919a7a9d5183 230 Gene3D G3DSA:3.40.50.850 3 225 4.5E-62 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 YE1949 347db19304a85dd5c41d919a7a9d5183 230 PANTHER PTHR11080:SF19 1 218 6.6E-80 T 22-04-2016 YE4091 54c4bdbafbfa08387a5405b6edb460db 141 Gene3D G3DSA:2.20.25.10 1 45 7.5E-24 T 22-04-2016 YE4091 54c4bdbafbfa08387a5405b6edb460db 141 SUPERFAMILY SSF82784 1 140 6.28E-43 T 22-04-2016 IPR003718 OsmC/Ohr family YE4091 54c4bdbafbfa08387a5405b6edb460db 141 Pfam PF02566 OsmC-like protein 45 138 1.9E-16 T 22-04-2016 IPR003718 OsmC/Ohr family YE4091 54c4bdbafbfa08387a5405b6edb460db 141 PANTHER PTHR33797 1 141 3.8E-70 T 22-04-2016 YE4091 54c4bdbafbfa08387a5405b6edb460db 141 Gene3D G3DSA:3.30.300.20 48 140 4.0E-35 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta YE4091 54c4bdbafbfa08387a5405b6edb460db 141 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 7 139 4.9E-55 T 22-04-2016 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 YE4091 54c4bdbafbfa08387a5405b6edb460db 141 PANTHER PTHR33797:SF2 1 141 3.8E-70 T 22-04-2016 YE3070 2d0cb748d6bf8fae5b164bb71f476dd9 363 Gene3D G3DSA:1.10.287.210 192 290 4.6E-31 T 22-04-2016 YE3070 2d0cb748d6bf8fae5b164bb71f476dd9 363 Pfam PF02706 Chain length determinant protein 26 187 2.7E-17 T 22-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 YE3070 2d0cb748d6bf8fae5b164bb71f476dd9 363 SUPERFAMILY SSF160355 66 308 1.18E-54 T 22-04-2016 YE3070 2d0cb748d6bf8fae5b164bb71f476dd9 363 Gene3D G3DSA:3.30.1890.10 54 127 7.3E-17 T 22-04-2016 YE3070 2d0cb748d6bf8fae5b164bb71f476dd9 363 Gene3D G3DSA:3.30.1890.10 128 191 1.7E-10 T 22-04-2016 YE4200 b55e36d1012f5c93ed34166e24b2ea8c 318 Gene3D G3DSA:1.10.3720.10 25 316 9.6E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE4200 b55e36d1012f5c93ed34166e24b2ea8c 318 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 18 311 1.8E-93 T 22-04-2016 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 YE4200 b55e36d1012f5c93ed34166e24b2ea8c 318 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 307 4.4E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE4200 b55e36d1012f5c93ed34166e24b2ea8c 318 SUPERFAMILY SSF161098 27 304 2.88E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE4200 b55e36d1012f5c93ed34166e24b2ea8c 318 PANTHER PTHR30425 12 318 1.3E-155 T 22-04-2016 YE4200 b55e36d1012f5c93ed34166e24b2ea8c 318 PANTHER PTHR30425:SF1 12 318 1.3E-155 T 22-04-2016 YE2244 a549008000bc3d12beab2a5557250f3d 300 SUPERFAMILY SSF52151 1 288 6.28E-58 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 YE2244 a549008000bc3d12beab2a5557250f3d 300 PANTHER PTHR14226:SF24 1 298 8.9E-116 T 22-04-2016 YE2244 a549008000bc3d12beab2a5557250f3d 300 Pfam PF01734 Patatin-like phospholipase 8 167 5.0E-23 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 YE2244 a549008000bc3d12beab2a5557250f3d 300 PANTHER PTHR14226 1 298 8.9E-116 T 22-04-2016 YE2244 a549008000bc3d12beab2a5557250f3d 300 Gene3D G3DSA:3.40.1090.10 33 169 3.7E-6 T 22-04-2016 YE1659 b67855f3fd129023d20d2a83f8f3bd1e 77 PANTHER PTHR37550 1 77 8.0E-24 T 22-04-2016 YE1659 b67855f3fd129023d20d2a83f8f3bd1e 77 SUPERFAMILY SSF89447 5 69 3.98E-5 T 22-04-2016 YE1659 b67855f3fd129023d20d2a83f8f3bd1e 77 PANTHER PTHR37550:SF2 1 77 8.0E-24 T 22-04-2016 YE1659 b67855f3fd129023d20d2a83f8f3bd1e 77 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 7 52 5.9E-6 T 22-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 YE3701 28278ce985d883f29e9ce13cc00a194e 167 PANTHER PTHR30399 1 167 5.6E-110 T 22-04-2016 YE3701 28278ce985d883f29e9ce13cc00a194e 167 Pfam PF01863 Protein of unknown function DUF45 69 149 1.1E-10 T 22-04-2016 IPR002725 Protein of unknown function DUF45 YE3701 28278ce985d883f29e9ce13cc00a194e 167 PANTHER PTHR30399:SF4 1 167 5.6E-110 T 22-04-2016 YE0125 df42703cf5e04a7b0762243ac674fc9f 213 Pfam PF06438 Heme-binding protein A (HasA) 1 213 4.2E-35 T 22-04-2016 IPR010495 Haem-binding HasA YE0125 df42703cf5e04a7b0762243ac674fc9f 213 Gene3D G3DSA:3.30.1500.10 1 192 3.8E-28 T 22-04-2016 IPR010495 Haem-binding HasA YE0125 df42703cf5e04a7b0762243ac674fc9f 213 SUPERFAMILY SSF54621 2 187 3.01E-18 T 22-04-2016 IPR010495 Haem-binding HasA YE1170 a27446a54b712511f1b2613a48da3853 372 PANTHER PTHR30349:SF20 98 368 1.8E-27 T 22-04-2016 YE1170 a27446a54b712511f1b2613a48da3853 372 Gene3D G3DSA:1.10.443.10 189 370 1.3E-33 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 YE1170 a27446a54b712511f1b2613a48da3853 372 PANTHER PTHR30349 98 368 1.8E-27 T 22-04-2016 YE1170 a27446a54b712511f1b2613a48da3853 372 Gene3D G3DSA:1.10.150.130 60 158 1.5E-6 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal YE1170 a27446a54b712511f1b2613a48da3853 372 SUPERFAMILY SSF56349 61 370 2.52E-44 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YE1170 a27446a54b712511f1b2613a48da3853 372 Pfam PF00589 Phage integrase family 188 363 6.7E-25 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 YE1028 a50ad14f7d4e62b767efa031ccb56049 195 TIGRFAM TIGR01545 YfhB_g-proteo: HAD hydrolase, family IF 1 195 8.9E-118 T 22-04-2016 IPR006435 HAD-superfamily hydrolase, subfamily IF, YfhB KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 YE1028 a50ad14f7d4e62b767efa031ccb56049 195 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 176 5.5E-7 T 22-04-2016 YE1028 a50ad14f7d4e62b767efa031ccb56049 195 Gene3D G3DSA:3.40.50.1000 85 192 4.0E-6 T 22-04-2016 IPR023214 HAD-like domain YE3654 7cfb2ae47398161fc01611dce16ac20a 475 Pfam PF00394 Multicopper oxidase 230 288 5.0E-4 T 22-04-2016 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 YE3654 7cfb2ae47398161fc01611dce16ac20a 475 SUPERFAMILY SSF49503 3 166 1.34E-25 T 22-04-2016 IPR008972 Cupredoxin YE3654 7cfb2ae47398161fc01611dce16ac20a 475 Gene3D G3DSA:2.60.40.420 34 172 3.3E-21 T 22-04-2016 IPR008972 Cupredoxin YE3654 7cfb2ae47398161fc01611dce16ac20a 475 SUPERFAMILY SSF49503 173 292 7.48E-31 T 22-04-2016 IPR008972 Cupredoxin YE3654 7cfb2ae47398161fc01611dce16ac20a 475 PANTHER PTHR11709 53 305 9.0E-178 T 22-04-2016 YE3654 7cfb2ae47398161fc01611dce16ac20a 475 Pfam PF07731 Multicopper oxidase 361 469 1.1E-12 T 22-04-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 YE3654 7cfb2ae47398161fc01611dce16ac20a 475 Hamap MF_00915 Cell division protein FtsP [ftsP]. 1 469 57.927 T 22-04-2016 IPR026589 Cell division protein FtsP GO:0043093 YE3654 7cfb2ae47398161fc01611dce16ac20a 475 Gene3D G3DSA:2.60.40.420 173 288 1.1E-29 T 22-04-2016 IPR008972 Cupredoxin YE3654 7cfb2ae47398161fc01611dce16ac20a 475 Gene3D G3DSA:2.60.40.420 362 468 1.7E-10 T 22-04-2016 IPR008972 Cupredoxin YE3654 7cfb2ae47398161fc01611dce16ac20a 475 PANTHER PTHR11709:SF69 53 305 9.0E-178 T 22-04-2016 YE3654 7cfb2ae47398161fc01611dce16ac20a 475 SUPERFAMILY SSF49503 316 466 6.3E-17 T 22-04-2016 IPR008972 Cupredoxin YE3654 7cfb2ae47398161fc01611dce16ac20a 475 Pfam PF07732 Multicopper oxidase 53 167 2.9E-26 T 22-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 YE1171 028c33684d475c580045de223df11ab8 406 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 111 254 2.1E-14 T 22-04-2016 IPR000477 Reverse transcriptase domain YE1171 028c33684d475c580045de223df11ab8 406 SUPERFAMILY SSF56672 160 266 6.76E-5 T 22-04-2016 YE3547 2890b149e409c4a483e6d8338b93aa94 369 TIGRFAM TIGR02568 LcrE: type III secretion regulator YopN/LcrE/InvE/MxiC 20 260 5.2E-30 T 22-04-2016 IPR013401 Type III secretion regulator, YopN/LcrE/InvE/MxiC GO:0009986|GO:0030254|GO:0050709 YE3547 2890b149e409c4a483e6d8338b93aa94 369 Pfam PF07201 HrpJ-like domain 43 203 7.7E-45 T 22-04-2016 IPR010812 Hypersensitivity response secretion-like, HrpJ GO:0009405|GO:0019867|GO:0046903 YE3547 2890b149e409c4a483e6d8338b93aa94 369 SUPERFAMILY SSF140591 56 249 1.8E-58 T 22-04-2016 YE2316 d611b7b8aa168fa89bc8313f492329a8 306 Pfam PF08813 Phage tail tube protein, TTP 52 214 2.7E-49 T 22-04-2016 IPR014918 Phage tail tube protein 3 YE2316 d611b7b8aa168fa89bc8313f492329a8 306 SMART SM00635 223 301 2.2E-14 T 22-04-2016 IPR003343 Bacterial Ig-like, group 2 YE2316 d611b7b8aa168fa89bc8313f492329a8 306 SUPERFAMILY SSF49373 222 304 2.16E-12 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YE2316 d611b7b8aa168fa89bc8313f492329a8 306 Gene3D G3DSA:2.60.40.1080 223 305 2.1E-18 T 22-04-2016 YE2316 d611b7b8aa168fa89bc8313f492329a8 306 Pfam PF02368 Bacterial Ig-like domain (group 2) 223 302 2.0E-16 T 22-04-2016 IPR003343 Bacterial Ig-like, group 2 YE0526 a702daedcc23c77cfad6e55a9ea52a2b 331 PANTHER PTHR32196 1 331 1.3E-164 T 22-04-2016 YE0526 a702daedcc23c77cfad6e55a9ea52a2b 331 Pfam PF02653 Branched-chain amino acid transport system / permease component 38 307 6.6E-47 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YE0526 a702daedcc23c77cfad6e55a9ea52a2b 331 PANTHER PTHR32196:SF24 1 331 1.3E-164 T 22-04-2016 YE2789 edb206d7fd8ec8f84b5913af6282c835 406 SUPERFAMILY SSF103473 11 390 6.8E-51 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE2789 edb206d7fd8ec8f84b5913af6282c835 406 Pfam PF07690 Major Facilitator Superfamily 11 350 1.2E-36 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YE2789 edb206d7fd8ec8f84b5913af6282c835 406 PANTHER PTHR23546 4 400 3.9E-112 T 22-04-2016 YE2789 edb206d7fd8ec8f84b5913af6282c835 406 Gene3D G3DSA:1.20.1250.20 8 179 1.6E-25 T 22-04-2016 YE2789 edb206d7fd8ec8f84b5913af6282c835 406 Gene3D G3DSA:1.20.1250.20 208 389 1.0E-15 T 22-04-2016 YE2789 edb206d7fd8ec8f84b5913af6282c835 406 PANTHER PTHR23546:SF1 4 400 3.9E-112 T 22-04-2016 YE0647a 46e324b2033b561eb88975d9fe032573 88 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 3 88 6.4E-18 T 22-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family YE0647a 46e324b2033b561eb88975d9fe032573 88 SUPERFAMILY SSF143011 1 88 1.01E-22 T 22-04-2016 YE0647a 46e324b2033b561eb88975d9fe032573 88 PIRSF PIRSF006156 1 88 6.5E-24 T 22-04-2016 IPR004386 Toxin-antitoxin system, YafQ-like toxin YE0647a 46e324b2033b561eb88975d9fe032573 88 PANTHER PTHR40588 1 88 9.7E-21 T 22-04-2016 YE0647a 46e324b2033b561eb88975d9fe032573 88 Pfam PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ 3 88 3.3E-28 T 22-04-2016 IPR004386 Toxin-antitoxin system, YafQ-like toxin YE1487 d70940c66a22ee8517c6897c513276a3 281 Gene3D G3DSA:1.10.3720.10 11 270 1.1E-57 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE1487 d70940c66a22ee8517c6897c513276a3 281 PANTHER PTHR30222 8 274 5.8E-87 T 22-04-2016 YE1487 d70940c66a22ee8517c6897c513276a3 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 269 5.0E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE1487 d70940c66a22ee8517c6897c513276a3 281 SUPERFAMILY SSF161098 8 267 3.83E-52 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE1487 d70940c66a22ee8517c6897c513276a3 281 PANTHER PTHR30222:SF1 8 274 5.8E-87 T 22-04-2016 YE3796 eb4e5b1cb665677d7f06aafc0759b2f6 67 Hamap MF_01546 Protein AaeX [aaeX]. 1 67 22.852 T 22-04-2016 IPR012451 Protein of unknown function DUF1656 YE3796 eb4e5b1cb665677d7f06aafc0759b2f6 67 Pfam PF07869 Protein of unknown function (DUF1656) 7 61 7.0E-20 T 22-04-2016 IPR012451 Protein of unknown function DUF1656 YE0484 61e494ddb48efaa8ef1dff0f5ec9fc99 174 Gene3D G3DSA:3.40.50.360 1 169 1.2E-42 T 22-04-2016 IPR029039 Flavoprotein-like domain YE0484 61e494ddb48efaa8ef1dff0f5ec9fc99 174 Pfam PF02525 Flavodoxin-like fold 3 165 4.8E-41 T 22-04-2016 IPR003680 Flavodoxin-like fold YE0484 61e494ddb48efaa8ef1dff0f5ec9fc99 174 PANTHER PTHR10204:SF42 1 165 1.4E-59 T 22-04-2016 YE0484 61e494ddb48efaa8ef1dff0f5ec9fc99 174 SUPERFAMILY SSF52218 1 173 2.21E-46 T 22-04-2016 IPR029039 Flavoprotein-like domain YE0484 61e494ddb48efaa8ef1dff0f5ec9fc99 174 PANTHER PTHR10204 1 165 1.4E-59 T 22-04-2016 YE1931 5aad84f7978f4b0083dcc15f5149b2ed 294 PANTHER PTHR35191 33 156 3.5E-39 T 22-04-2016 YE1931 5aad84f7978f4b0083dcc15f5149b2ed 294 Pfam PF12571 Phage tail-collar fibre protein 29 141 9.2E-41 T 22-04-2016 IPR022225 Phage tail fibre protein YE2575 9292a97f5950a367f06b49efcbae3cf7 557 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 294 316 - T 22-04-2016 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site YE2575 9292a97f5950a367f06b49efcbae3cf7 557 SMART SM00304 216 268 2.9E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YE2575 9292a97f5950a367f06b49efcbae3cf7 557 Pfam PF00672 HAMP domain 196 264 1.0E-14 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 YE2575 9292a97f5950a367f06b49efcbae3cf7 557 Gene3D G3DSA:1.20.120.30 35 180 2.7E-54 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 YE2575 9292a97f5950a367f06b49efcbae3cf7 557 SUPERFAMILY SSF58104 236 520 4.05E-76 T 22-04-2016 YE2575 9292a97f5950a367f06b49efcbae3cf7 557 SUPERFAMILY SSF47170 25 182 1.83E-49 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 YE2575 9292a97f5950a367f06b49efcbae3cf7 557 PANTHER PTHR32089 38 519 1.5E-207 T 22-04-2016 YE2575 9292a97f5950a367f06b49efcbae3cf7 557 PANTHER PTHR32089:SF48 38 519 1.5E-207 T 22-04-2016 YE2575 9292a97f5950a367f06b49efcbae3cf7 557 SMART SM00319 44 182 5.7E-45 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 YE2575 9292a97f5950a367f06b49efcbae3cf7 557 Pfam PF02203 Tar ligand binding domain homologue 1 176 7.0E-54 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 YE2575 9292a97f5950a367f06b49efcbae3cf7 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 394 3.4E-89 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE2575 9292a97f5950a367f06b49efcbae3cf7 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 3.4E-89 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE2575 9292a97f5950a367f06b49efcbae3cf7 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 60 75 3.4E-89 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE2575 9292a97f5950a367f06b49efcbae3cf7 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 3.4E-89 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE2575 9292a97f5950a367f06b49efcbae3cf7 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 3.4E-89 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE2575 9292a97f5950a367f06b49efcbae3cf7 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 3.4E-89 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE2575 9292a97f5950a367f06b49efcbae3cf7 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 191 211 3.4E-89 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 YE2575 9292a97f5950a367f06b49efcbae3cf7 557 SMART SM00283 269 516 5.6E-95 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 YE2575 9292a97f5950a367f06b49efcbae3cf7 557 Gene3D G3DSA:1.10.287.950 284 488 1.4E-63 T 22-04-2016 YE2575 9292a97f5950a367f06b49efcbae3cf7 557 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 328 515 9.4E-67 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 YE3992 bf32bc4ca6dba2cb7b87a84748b50d3f 698 Pfam PF02446 4-alpha-glucanotransferase 151 669 4.1E-133 T 22-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 YE3992 bf32bc4ca6dba2cb7b87a84748b50d3f 698 Gene3D G3DSA:3.20.20.80 617 691 2.4E-167 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 YE3992 bf32bc4ca6dba2cb7b87a84748b50d3f 698 Gene3D G3DSA:3.20.20.80 144 578 2.4E-167 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 YE3992 bf32bc4ca6dba2cb7b87a84748b50d3f 698 PANTHER PTHR32438:SF5 62 566 1.8E-269 T 22-04-2016 YE3992 bf32bc4ca6dba2cb7b87a84748b50d3f 698 PANTHER PTHR32438:SF5 585 693 1.8E-269 T 22-04-2016 YE3992 bf32bc4ca6dba2cb7b87a84748b50d3f 698 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 103 690 5.3E-244 T 22-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 YE3992 bf32bc4ca6dba2cb7b87a84748b50d3f 698 PANTHER PTHR32438 62 566 1.8E-269 T 22-04-2016 YE3992 bf32bc4ca6dba2cb7b87a84748b50d3f 698 PANTHER PTHR32438 585 693 1.8E-269 T 22-04-2016 YE3992 bf32bc4ca6dba2cb7b87a84748b50d3f 698 SUPERFAMILY SSF51445 604 691 3.45E-150 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YE3992 bf32bc4ca6dba2cb7b87a84748b50d3f 698 SUPERFAMILY SSF51445 131 565 3.45E-150 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YE2692 014b15b67c5c4a26572501c0c276aa5e 200 PANTHER PTHR33420 20 200 6.7E-71 T 22-04-2016 YE2692 014b15b67c5c4a26572501c0c276aa5e 200 Pfam PF16970 Type-1 fimbrial protein, A 72 199 1.8E-12 T 22-04-2016 YE2692 014b15b67c5c4a26572501c0c276aa5e 200 Gene3D G3DSA:2.60.40.1090 45 200 4.5E-25 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YE2692 014b15b67c5c4a26572501c0c276aa5e 200 SUPERFAMILY SSF49401 54 200 3.98E-21 T 22-04-2016 IPR008966 Adhesion domain YE2692 014b15b67c5c4a26572501c0c276aa5e 200 PANTHER PTHR33420:SF2 20 200 6.7E-71 T 22-04-2016 YE2469 de29f44d4e46c3fe0eaeb6ea9f931e8f 414 Pfam PF00202 Aminotransferase class-III 22 401 1.2E-123 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YE2469 de29f44d4e46c3fe0eaeb6ea9f931e8f 414 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 228 265 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YE2469 de29f44d4e46c3fe0eaeb6ea9f931e8f 414 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 15 403 2.9E-155 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 YE2469 de29f44d4e46c3fe0eaeb6ea9f931e8f 414 PANTHER PTHR11986:SF71 1 413 0.0 T 22-04-2016 YE2469 de29f44d4e46c3fe0eaeb6ea9f931e8f 414 Gene3D G3DSA:3.40.640.10 60 308 1.8E-89 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YE2469 de29f44d4e46c3fe0eaeb6ea9f931e8f 414 PANTHER PTHR11986 1 413 0.0 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 YE2469 de29f44d4e46c3fe0eaeb6ea9f931e8f 414 Hamap MF_01173 Succinylornithine transaminase [astC]. 3 414 74.175 T 22-04-2016 IPR026330 Succinylornithine transaminase GO:0006527|GO:0006593|GO:0043825 KEGG: 00330+2.6.1.81|UniPathway: UPA00185 YE2469 de29f44d4e46c3fe0eaeb6ea9f931e8f 414 SUPERFAMILY SSF53383 16 402 2.58E-124 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YE2469 de29f44d4e46c3fe0eaeb6ea9f931e8f 414 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 7 409 1.6E-223 T 22-04-2016 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 YE2469 de29f44d4e46c3fe0eaeb6ea9f931e8f 414 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 13 406 45.25 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 YE2469 de29f44d4e46c3fe0eaeb6ea9f931e8f 414 Gene3D G3DSA:3.90.1150.10 312 406 8.9E-36 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YE2469 de29f44d4e46c3fe0eaeb6ea9f931e8f 414 Gene3D G3DSA:3.90.1150.10 10 59 8.9E-36 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YE0582 3251d7919d175daa878115576e7155ed 303 SUPERFAMILY SSF53850 89 289 1.25E-42 T 22-04-2016 YE0582 3251d7919d175daa878115576e7155ed 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 4.5E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE0582 3251d7919d175daa878115576e7155ed 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 4.5E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE0582 3251d7919d175daa878115576e7155ed 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 4.5E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE0582 3251d7919d175daa878115576e7155ed 303 SUPERFAMILY SSF46785 5 89 5.9E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0582 3251d7919d175daa878115576e7155ed 303 Gene3D G3DSA:3.40.190.10 179 258 5.1E-15 T 22-04-2016 YE0582 3251d7919d175daa878115576e7155ed 303 Pfam PF03466 LysR substrate binding domain 89 287 1.6E-41 T 22-04-2016 IPR005119 LysR, substrate-binding YE0582 3251d7919d175daa878115576e7155ed 303 Gene3D G3DSA:3.40.190.10 93 178 1.7E-22 T 22-04-2016 YE0582 3251d7919d175daa878115576e7155ed 303 PANTHER PTHR30537:SF5 1 287 4.0E-97 T 22-04-2016 YE0582 3251d7919d175daa878115576e7155ed 303 Gene3D G3DSA:1.10.10.10 4 88 2.5E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0582 3251d7919d175daa878115576e7155ed 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.9E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE0582 3251d7919d175daa878115576e7155ed 303 PANTHER PTHR30537 1 287 4.0E-97 T 22-04-2016 YE3307 9434f2014e931e189219235a9043ad6a 416 SUPERFAMILY SSF53187 188 284 1.63E-54 T 22-04-2016 YE3307 9434f2014e931e189219235a9043ad6a 416 SUPERFAMILY SSF53187 331 407 1.63E-54 T 22-04-2016 YE3307 9434f2014e931e189219235a9043ad6a 416 PANTHER PTHR30404:SF0 13 409 1.4E-137 T 22-04-2016 YE3307 9434f2014e931e189219235a9043ad6a 416 Pfam PF11741 AMIN domain 39 142 5.2E-28 T 22-04-2016 IPR021731 AMIN domain YE3307 9434f2014e931e189219235a9043ad6a 416 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 190 404 9.1E-52 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 YE3307 9434f2014e931e189219235a9043ad6a 416 Gene3D G3DSA:3.40.630.40 188 285 5.8E-61 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 YE3307 9434f2014e931e189219235a9043ad6a 416 Gene3D G3DSA:3.40.630.40 332 407 5.8E-61 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 YE3307 9434f2014e931e189219235a9043ad6a 416 SMART SM00646 250 404 5.7E-64 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 YE3307 9434f2014e931e189219235a9043ad6a 416 PANTHER PTHR30404 13 409 1.4E-137 T 22-04-2016 YE4099 977c1f0eccba6b4216a46b5f7221f818 466 Gene3D G3DSA:3.20.20.80 4 464 5.5E-122 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 YE4099 977c1f0eccba6b4216a46b5f7221f818 466 PANTHER PTHR10353:SF73 1 462 7.5E-218 T 22-04-2016 YE4099 977c1f0eccba6b4216a46b5f7221f818 466 PRINTS PR00131 Glycosyl hydrolase family 1 signature 289 303 2.3E-9 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YE4099 977c1f0eccba6b4216a46b5f7221f818 466 PRINTS PR00131 Glycosyl hydrolase family 1 signature 407 424 2.3E-9 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YE4099 977c1f0eccba6b4216a46b5f7221f818 466 PRINTS PR00131 Glycosyl hydrolase family 1 signature 431 443 2.3E-9 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YE4099 977c1f0eccba6b4216a46b5f7221f818 466 PRINTS PR00131 Glycosyl hydrolase family 1 signature 386 397 2.3E-9 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YE4099 977c1f0eccba6b4216a46b5f7221f818 466 SUPERFAMILY SSF51445 2 458 7.45E-131 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YE4099 977c1f0eccba6b4216a46b5f7221f818 466 Pfam PF00232 Glycosyl hydrolase family 1 4 461 2.5E-104 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YE4099 977c1f0eccba6b4216a46b5f7221f818 466 PANTHER PTHR10353 1 462 7.5E-218 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YE2799 259bda1e2a019e618fcfeef17d272917 675 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 237 261 1.7E-10 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 YE2799 259bda1e2a019e618fcfeef17d272917 675 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 388 414 1.7E-10 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 YE2799 259bda1e2a019e618fcfeef17d272917 675 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 168 192 1.7E-10 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 YE2799 259bda1e2a019e618fcfeef17d272917 675 PANTHER PTHR22773:SF91 545 650 2.5E-186 T 22-04-2016 YE2799 259bda1e2a019e618fcfeef17d272917 675 PANTHER PTHR22773:SF91 1 492 2.5E-186 T 22-04-2016 YE2799 259bda1e2a019e618fcfeef17d272917 675 Pfam PF00361 Proton-conducting membrane transporter 135 419 4.6E-58 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 YE2799 259bda1e2a019e618fcfeef17d272917 675 PANTHER PTHR22773 545 650 2.5E-186 T 22-04-2016 YE2799 259bda1e2a019e618fcfeef17d272917 675 PANTHER PTHR22773 1 492 2.5E-186 T 22-04-2016 YE2937 18e673419abd3722420894fa9307d21d 110 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 30 107 3.2E-30 T 22-04-2016 IPR011846 Cyd operon protein YbgE YE2937 18e673419abd3722420894fa9307d21d 110 TIGRFAM TIGR02112 cyd_oper_ybgE: cyd operon protein YbgE 19 110 7.3E-40 T 22-04-2016 IPR011846 Cyd operon protein YbgE YE3880 6c906b8cdc4a925c6a81f099ec7e2e75 435 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 9 256 7.4E-115 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 YE3880 6c906b8cdc4a925c6a81f099ec7e2e75 435 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 257 435 6.4E-89 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 YE3880 6c906b8cdc4a925c6a81f099ec7e2e75 435 ProSitePatterns PS00161 Isocitrate lyase signature. 194 199 - T 22-04-2016 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 YE3880 6c906b8cdc4a925c6a81f099ec7e2e75 435 Gene3D G3DSA:3.20.20.60 6 418 5.0E-172 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YE3880 6c906b8cdc4a925c6a81f099ec7e2e75 435 PANTHER PTHR21631 5 435 2.3E-177 T 22-04-2016 YE3880 6c906b8cdc4a925c6a81f099ec7e2e75 435 Pfam PF00463 Isocitrate lyase family 9 256 4.5E-62 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 YE3880 6c906b8cdc4a925c6a81f099ec7e2e75 435 Pfam PF00463 Isocitrate lyase family 258 435 9.7E-49 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 YE3880 6c906b8cdc4a925c6a81f099ec7e2e75 435 PIRSF PIRSF001362 1 435 8.1E-226 T 22-04-2016 YE3880 6c906b8cdc4a925c6a81f099ec7e2e75 435 SUPERFAMILY SSF51621 5 435 3.14E-155 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 YE0308 201f1d5291578213b08bc51efbe574ae 103 PANTHER PTHR38598 2 103 9.3E-48 T 22-04-2016 YE0308 201f1d5291578213b08bc51efbe574ae 103 Pfam PF04341 Protein of unknown function, DUF485 11 98 3.3E-34 T 22-04-2016 IPR007436 Protein of unknown function DUF485 YE4063 f66036ba4482ba30d335fe3c0f0562c1 258 SUPERFAMILY SSF141868 26 251 5.75E-28 T 22-04-2016 IPR001633 EAL domain YE4063 f66036ba4482ba30d335fe3c0f0562c1 258 Pfam PF00563 EAL domain 27 243 4.8E-25 T 22-04-2016 IPR001633 EAL domain YE4063 f66036ba4482ba30d335fe3c0f0562c1 258 Gene3D G3DSA:3.20.20.450 32 251 4.8E-21 T 22-04-2016 IPR001633 EAL domain YE4063 f66036ba4482ba30d335fe3c0f0562c1 258 PANTHER PTHR33121:SF6 17 243 2.9E-115 T 22-04-2016 YE4063 f66036ba4482ba30d335fe3c0f0562c1 258 SMART SM00052 18 248 1.2E-9 T 22-04-2016 IPR001633 EAL domain YE4063 f66036ba4482ba30d335fe3c0f0562c1 258 PANTHER PTHR33121 17 243 2.9E-115 T 22-04-2016 YE2127 9455c0699451937b1f0303f6dbab3cc2 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 295 4.7E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE2127 9455c0699451937b1f0303f6dbab3cc2 296 Gene3D G3DSA:1.10.3720.10 88 292 1.2E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE2127 9455c0699451937b1f0303f6dbab3cc2 296 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 66 2.3E-6 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YE2127 9455c0699451937b1f0303f6dbab3cc2 296 PANTHER PTHR30465 7 296 1.5E-192 T 22-04-2016 YE2127 9455c0699451937b1f0303f6dbab3cc2 296 SUPERFAMILY SSF161098 90 277 4.06E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE2127 9455c0699451937b1f0303f6dbab3cc2 296 PANTHER PTHR30465:SF49 7 296 1.5E-192 T 22-04-2016 YE1450 f3787c4656481f41338a3c681a97eb7e 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 21 92 2.3E-15 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YE1450 f3787c4656481f41338a3c681a97eb7e 221 SUPERFAMILY SSF46894 4 93 2.58E-16 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YE1450 f3787c4656481f41338a3c681a97eb7e 221 Gene3D G3DSA:1.10.10.10 4 93 2.9E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1450 f3787c4656481f41338a3c681a97eb7e 221 SMART SM00862 18 92 1.9E-12 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YE1561 acabe4b98d53294bcdde2fe8cfd01adb 396 PANTHER PTHR11879:SF11 1 395 1.3E-277 T 22-04-2016 YE1561 acabe4b98d53294bcdde2fe8cfd01adb 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 1.2E-39 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 YE1561 acabe4b98d53294bcdde2fe8cfd01adb 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 1.2E-39 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 YE1561 acabe4b98d53294bcdde2fe8cfd01adb 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 1.2E-39 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 YE1561 acabe4b98d53294bcdde2fe8cfd01adb 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 1.2E-39 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 YE1561 acabe4b98d53294bcdde2fe8cfd01adb 396 PANTHER PTHR11879 1 395 1.3E-277 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 YE1561 acabe4b98d53294bcdde2fe8cfd01adb 396 SUPERFAMILY SSF53383 1 396 5.96E-119 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YE1561 acabe4b98d53294bcdde2fe8cfd01adb 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 YE1561 acabe4b98d53294bcdde2fe8cfd01adb 396 Gene3D G3DSA:3.40.640.10 45 315 3.4E-106 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YE1561 acabe4b98d53294bcdde2fe8cfd01adb 396 Pfam PF00155 Aminotransferase class I and II 27 392 1.9E-91 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YE1633 94c6cbe97116c3c365c5898bb1b1d645 321 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 321 2.9E-144 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 YE1633 94c6cbe97116c3c365c5898bb1b1d645 321 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 232 320 8.4E-36 T 22-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 YE1633 94c6cbe97116c3c365c5898bb1b1d645 321 Gene3D G3DSA:3.40.47.10 1 164 7.9E-62 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YE1633 94c6cbe97116c3c365c5898bb1b1d645 321 Gene3D G3DSA:3.40.47.10 165 320 6.5E-53 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YE1633 94c6cbe97116c3c365c5898bb1b1d645 321 PANTHER PTHR18919:SF109 26 321 2.4E-127 T 22-04-2016 YE1633 94c6cbe97116c3c365c5898bb1b1d645 321 SUPERFAMILY SSF53901 4 321 4.52E-68 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YE1633 94c6cbe97116c3c365c5898bb1b1d645 321 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 321 68.998 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 YE1633 94c6cbe97116c3c365c5898bb1b1d645 321 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 110 187 4.4E-31 T 22-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 YE1633 94c6cbe97116c3c365c5898bb1b1d645 321 PANTHER PTHR18919 26 321 2.4E-127 T 22-04-2016 YE2080 022122849f1e341255fe5f7b96292c29 317 Pfam PF07338 Protein of unknown function (DUF1471) 36 91 2.5E-20 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 YE2080 022122849f1e341255fe5f7b96292c29 317 Pfam PF07338 Protein of unknown function (DUF1471) 120 176 3.2E-19 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 YE2080 022122849f1e341255fe5f7b96292c29 317 Pfam PF07338 Protein of unknown function (DUF1471) 261 317 1.1E-20 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 YE2080 022122849f1e341255fe5f7b96292c29 317 SUPERFAMILY SSF159871 109 179 9.94E-18 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 YE2080 022122849f1e341255fe5f7b96292c29 317 SUPERFAMILY SSF159871 241 317 1.26E-18 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 YE2080 022122849f1e341255fe5f7b96292c29 317 Gene3D G3DSA:3.30.1660.10 25 91 1.3E-26 T 22-04-2016 IPR025543 Dodecin-like YE2080 022122849f1e341255fe5f7b96292c29 317 Gene3D G3DSA:3.30.1660.10 110 176 6.7E-27 T 22-04-2016 IPR025543 Dodecin-like YE2080 022122849f1e341255fe5f7b96292c29 317 Gene3D G3DSA:3.30.1660.10 251 317 6.7E-25 T 22-04-2016 IPR025543 Dodecin-like YE2080 022122849f1e341255fe5f7b96292c29 317 SUPERFAMILY SSF159871 5 94 2.49E-22 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 YE2080 022122849f1e341255fe5f7b96292c29 317 PANTHER PTHR34156 2 316 7.1E-242 T 22-04-2016 YE2080 022122849f1e341255fe5f7b96292c29 317 PIRSF PIRSF014774 1 317 2.9E-185 T 22-04-2016 IPR025539 YdgH protein YE2080 022122849f1e341255fe5f7b96292c29 317 PANTHER PTHR34156:SF2 2 316 7.1E-242 T 22-04-2016 YE3682 e0f63aa874b218a4c9d359851efe3e90 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 4.1E-24 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 YE3682 e0f63aa874b218a4c9d359851efe3e90 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.283 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 YE3682 e0f63aa874b218a4c9d359851efe3e90 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 56 1.0E-15 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 YE3682 e0f63aa874b218a4c9d359851efe3e90 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 22-04-2016 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3682 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 2.8E-17 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 YE3682 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 2.8E-17 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 YE3682 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 2.8E-17 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 YE3682 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 2.8E-17 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 YE3682 e0f63aa874b218a4c9d359851efe3e90 71 PANTHER PTHR21109 1 71 2.6E-27 T 22-04-2016 YE3682 e0f63aa874b218a4c9d359851efe3e90 71 Pfam PF01165 Ribosomal protein S21 4 56 5.1E-22 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 YE1522 9899123376f020a1f9f036732e53f13d 588 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE1522 9899123376f020a1f9f036732e53f13d 588 Pfam PF00005 ABC transporter 369 514 1.4E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE1522 9899123376f020a1f9f036732e53f13d 588 PANTHER PTHR24221 1 587 0.0 T 22-04-2016 YE1522 9899123376f020a1f9f036732e53f13d 588 PANTHER PTHR24221:SF261 1 587 0.0 T 22-04-2016 YE1522 9899123376f020a1f9f036732e53f13d 588 Gene3D G3DSA:1.20.1560.10 11 329 3.4E-44 T 22-04-2016 YE1522 9899123376f020a1f9f036732e53f13d 588 SUPERFAMILY SSF90123 11 331 1.96E-54 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YE1522 9899123376f020a1f9f036732e53f13d 588 Pfam PF00664 ABC transporter transmembrane region 26 291 1.7E-40 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 YE1522 9899123376f020a1f9f036732e53f13d 588 SMART SM00382 375 560 7.4E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain YE1522 9899123376f020a1f9f036732e53f13d 588 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 21 556 2.1E-202 T 22-04-2016 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 YE1522 9899123376f020a1f9f036732e53f13d 588 SUPERFAMILY SSF52540 363 582 5.42E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1522 9899123376f020a1f9f036732e53f13d 588 Gene3D G3DSA:3.40.50.300 364 586 7.9E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1036 977e72c5627b8d788b73e815071a43ff 333 Pfam PF13942 YfhG lipoprotein 41 214 2.2E-77 T 22-04-2016 IPR025262 Quorum-sensing regulator protein G YE1036 977e72c5627b8d788b73e815071a43ff 333 ProDom PD117379 LIPOPROTEIN YFHG HELIX ALPHA REGULATOR MEMBRANE TRANSCRIPTIONAL FAMILIIY EBP TWO-COMPONENT 2 212 7.0E-100 T 22-04-2016 YE1938 a8fc99ea03e370ed3d0d615f44d30418 286 Pfam PF03239 Iron permease FTR1 family 1 267 2.1E-68 T 22-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 YE1938 a8fc99ea03e370ed3d0d615f44d30418 286 PANTHER PTHR31632 1 273 5.5E-107 T 22-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 YE4031 c439863a0e699bbad6dbeb31dc3c4248 501 Pfam PF00171 Aldehyde dehydrogenase family 16 480 5.8E-137 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 YE4031 c439863a0e699bbad6dbeb31dc3c4248 501 SUPERFAMILY SSF53720 3 485 7.72E-142 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 YE4031 c439863a0e699bbad6dbeb31dc3c4248 501 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 4 485 1.0E-199 T 22-04-2016 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373 YE4031 c439863a0e699bbad6dbeb31dc3c4248 501 PANTHER PTHR11699 1 497 0.0 T 22-04-2016 YE4031 c439863a0e699bbad6dbeb31dc3c4248 501 Gene3D G3DSA:3.40.605.10 4 260 9.9E-88 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 YE4031 c439863a0e699bbad6dbeb31dc3c4248 501 Gene3D G3DSA:3.40.309.10 261 446 2.1E-63 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 YE4031 c439863a0e699bbad6dbeb31dc3c4248 501 PANTHER PTHR11699:SF188 1 497 0.0 T 22-04-2016 YE0999 f6cd06e9eb9d65ccf811997e81e6a812 293 Gene3D G3DSA:2.60.200.30 150 262 7.4E-43 T 22-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 YE0999 f6cd06e9eb9d65ccf811997e81e6a812 293 Gene3D G3DSA:3.40.50.10330 3 149 7.3E-41 T 22-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 YE0999 f6cd06e9eb9d65ccf811997e81e6a812 293 PANTHER PTHR20275 3 292 9.2E-115 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 YE0999 f6cd06e9eb9d65ccf811997e81e6a812 293 Hamap MF_00361 NAD kinase [nadK]. 7 288 33.825 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 YE0999 f6cd06e9eb9d65ccf811997e81e6a812 293 SUPERFAMILY SSF111331 9 290 1.31E-93 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain YE0999 f6cd06e9eb9d65ccf811997e81e6a812 293 Pfam PF01513 ATP-NAD kinase 9 272 7.9E-76 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 YE1664 28828593600ab8bd226743f8d66315a0 302 PANTHER PTHR35862:SF1 4 302 9.1E-130 T 22-04-2016 YE1664 28828593600ab8bd226743f8d66315a0 302 PIRSF PIRSF020481 1 302 1.9E-123 T 22-04-2016 IPR014507 Baseplate assembly protein J, predicted YE1664 28828593600ab8bd226743f8d66315a0 302 Pfam PF04865 Baseplate J-like protein 118 261 3.0E-25 T 22-04-2016 IPR006949 Baseplate protein J-like YE1664 28828593600ab8bd226743f8d66315a0 302 PANTHER PTHR35862 4 302 9.1E-130 T 22-04-2016 YE3046 becd52a7d785a8436d99e7197a507b99 70 PANTHER PTHR32319 8 68 3.7E-27 T 22-04-2016 YE3046 becd52a7d785a8436d99e7197a507b99 70 Pfam PF13275 S4 domain 8 68 3.4E-22 T 22-04-2016 YE3046 becd52a7d785a8436d99e7197a507b99 70 Gene3D G3DSA:3.10.290.10 5 68 4.4E-25 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 YE3046 becd52a7d785a8436d99e7197a507b99 70 SUPERFAMILY SSF55174 6 69 1.7E-18 T 22-04-2016 YE0055 8efa661ddcfb187d78235b5fd95f5032 276 Gene3D G3DSA:3.60.15.10 1 254 9.3E-28 T 22-04-2016 IPR001279 Metallo-beta-lactamase YE0055 8efa661ddcfb187d78235b5fd95f5032 276 SMART SM00849 21 249 3.7E-4 T 22-04-2016 IPR001279 Metallo-beta-lactamase YE0055 8efa661ddcfb187d78235b5fd95f5032 276 PANTHER PTHR13754:SF13 1 276 4.7E-69 T 22-04-2016 YE0055 8efa661ddcfb187d78235b5fd95f5032 276 SUPERFAMILY SSF56281 4 266 1.3E-32 T 22-04-2016 IPR001279 Metallo-beta-lactamase YE0055 8efa661ddcfb187d78235b5fd95f5032 276 Pfam PF00753 Metallo-beta-lactamase superfamily 19 80 1.1E-12 T 22-04-2016 IPR001279 Metallo-beta-lactamase YE0055 8efa661ddcfb187d78235b5fd95f5032 276 PANTHER PTHR13754 1 276 4.7E-69 T 22-04-2016 YE0760 8d45249ef44de5f9a096616a77e0e3aa 344 Gene3D G3DSA:3.40.630.10 33 342 2.1E-45 T 22-04-2016 YE0760 8d45249ef44de5f9a096616a77e0e3aa 344 SUPERFAMILY SSF53187 22 280 5.43E-35 T 22-04-2016 YE0760 8d45249ef44de5f9a096616a77e0e3aa 344 Pfam PF04389 Peptidase family M28 110 323 3.0E-27 T 22-04-2016 IPR007484 Peptidase M28 YE0760 8d45249ef44de5f9a096616a77e0e3aa 344 PANTHER PTHR12147 34 248 1.1E-24 T 22-04-2016 YE3445 422562c073c967cf29307f88dc7d2ae7 362 PANTHER PTHR21666 178 361 6.7E-54 T 22-04-2016 YE3445 422562c073c967cf29307f88dc7d2ae7 362 SUPERFAMILY SSF53955 159 361 6.48E-37 T 22-04-2016 IPR023346 Lysozyme-like domain YE3445 422562c073c967cf29307f88dc7d2ae7 362 Hamap MF_01616 Membrane-bound lytic murein transglycosylase C [mltC]. 5 361 60.589 T 22-04-2016 IPR023664 Murein transglycosylase-C GO:0009279|GO:0016798|GO:0016998 YE3445 422562c073c967cf29307f88dc7d2ae7 362 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 216 244 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 YE3445 422562c073c967cf29307f88dc7d2ae7 362 Gene3D G3DSA:1.10.530.10 190 361 1.0E-41 T 22-04-2016 YE3445 422562c073c967cf29307f88dc7d2ae7 362 Pfam PF11873 Domain of unknown function (DUF3393) 7 194 5.0E-78 T 22-04-2016 IPR024570 Murein transglycosylase-C, N-terminal YE3445 422562c073c967cf29307f88dc7d2ae7 362 Pfam PF01464 Transglycosylase SLT domain 199 321 5.3E-33 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 YE3445 422562c073c967cf29307f88dc7d2ae7 362 PANTHER PTHR21666:SF224 178 361 6.7E-54 T 22-04-2016 YE0548 7b3a6e8ae1aea67457f433664b60c1f8 288 Pfam PF10014 2OG-Fe dioxygenase 93 282 8.4E-30 T 22-04-2016 IPR018724 2OG-Fe dioxygenase YE2701 9ee703426d1726b4c4e5510d295afc0a 445 PANTHER PTHR34496:SF5 6 354 1.3E-226 T 22-04-2016 YE2701 9ee703426d1726b4c4e5510d295afc0a 445 PANTHER PTHR34496 6 354 1.3E-226 T 22-04-2016 YE2701 9ee703426d1726b4c4e5510d295afc0a 445 Pfam PF11397 Glycosyltransferase (GlcNAc) 70 318 5.4E-60 T 22-04-2016 IPR021067 Glycosyltransferase, GlcNAc KEGG: 00052+2.4.1.22|UniPathway: UPA00378 YE2701 9ee703426d1726b4c4e5510d295afc0a 445 Pfam PF11397 Glycosyltransferase (GlcNAc) 6 46 4.9E-9 T 22-04-2016 IPR021067 Glycosyltransferase, GlcNAc KEGG: 00052+2.4.1.22|UniPathway: UPA00378 YE2701 9ee703426d1726b4c4e5510d295afc0a 445 SUPERFAMILY SSF53448 88 255 2.25E-6 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YE2613 9228e141073d07338756430b2710c3ec 426 Gene3D G3DSA:1.20.1250.20 229 414 4.5E-10 T 22-04-2016 YE2613 9228e141073d07338756430b2710c3ec 426 Pfam PF07690 Major Facilitator Superfamily 25 365 7.3E-9 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YE2613 9228e141073d07338756430b2710c3ec 426 SUPERFAMILY SSF103473 4 414 2.88E-25 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE2613 9228e141073d07338756430b2710c3ec 426 PANTHER PTHR12778 19 411 1.3E-61 T 22-04-2016 YE0812 147277ca43ed6fb3e9cae42fe15b546d 275 TIGRFAM TIGR00822 EII-Sor: PTS system, mannose/fructose/sorbose family, IIC component 11 275 1.8E-120 T 22-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 YE0812 147277ca43ed6fb3e9cae42fe15b546d 275 PANTHER PTHR32502:SF4 11 275 6.5E-131 T 22-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 YE0812 147277ca43ed6fb3e9cae42fe15b546d 275 PANTHER PTHR32502 11 275 6.5E-131 T 22-04-2016 YE0812 147277ca43ed6fb3e9cae42fe15b546d 275 Pfam PF03609 PTS system sorbose-specific iic component 15 247 6.8E-73 T 22-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 YE2431 35cea9e4744c40c9ff6735557cabbda7 360 Pfam PF03462 PCRF domain 12 203 4.1E-76 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 YE2431 35cea9e4744c40c9ff6735557cabbda7 360 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 YE2431 35cea9e4744c40c9ff6735557cabbda7 360 Gene3D G3DSA:3.30.160.20 214 288 7.2E-36 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain YE2431 35cea9e4744c40c9ff6735557cabbda7 360 Pfam PF00472 RF-1 domain 216 321 4.0E-41 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 YE2431 35cea9e4744c40c9ff6735557cabbda7 360 SUPERFAMILY SSF75620 12 353 6.67E-137 T 22-04-2016 YE2431 35cea9e4744c40c9ff6735557cabbda7 360 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 358 6.2E-174 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 YE2431 35cea9e4744c40c9ff6735557cabbda7 360 Gene3D G3DSA:1.20.58.410 6 93 5.9E-20 T 22-04-2016 YE2431 35cea9e4744c40c9ff6735557cabbda7 360 PANTHER PTHR11075:SF9 1 356 1.0E-178 T 22-04-2016 YE2431 35cea9e4744c40c9ff6735557cabbda7 360 PANTHER PTHR11075 1 356 1.0E-178 T 22-04-2016 YE2431 35cea9e4744c40c9ff6735557cabbda7 360 SMART SM00937 63 178 5.5E-72 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 YE2431 35cea9e4744c40c9ff6735557cabbda7 360 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 357 40.719 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 YE3529 fa32dc8c81b194a578c670b1dd088663 590 Pfam PF04632 Fusaric acid resistance protein family 278 480 1.2E-25 T 22-04-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 YE3529 fa32dc8c81b194a578c670b1dd088663 590 PANTHER PTHR30509:SF3 1 589 1.3E-258 T 22-04-2016 YE3529 fa32dc8c81b194a578c670b1dd088663 590 PANTHER PTHR30509 1 589 1.3E-258 T 22-04-2016 YE3187 0c35d2d2e0e339dc5fe1087a3ab683aa 95 PANTHER PTHR36540 1 95 3.0E-50 T 22-04-2016 YE3187 0c35d2d2e0e339dc5fe1087a3ab683aa 95 SUPERFAMILY SSF51182 1 94 1.2E-32 T 22-04-2016 IPR011051 RmlC-like cupin domain YE3187 0c35d2d2e0e339dc5fe1087a3ab683aa 95 Pfam PF06865 Protein of unknown function (DUF1255) 3 93 5.0E-33 T 22-04-2016 IPR009664 Protein of unknown function DUF1255 YE3187 0c35d2d2e0e339dc5fe1087a3ab683aa 95 Hamap MF_01537 UPF0345 protein YaiE [yaiE]. 1 94 25.291 T 22-04-2016 IPR009664 Protein of unknown function DUF1255 YE3187 0c35d2d2e0e339dc5fe1087a3ab683aa 95 Gene3D G3DSA:2.60.120.10 1 94 3.6E-36 T 22-04-2016 IPR014710 RmlC-like jelly roll fold YE3187 0c35d2d2e0e339dc5fe1087a3ab683aa 95 PANTHER PTHR36540:SF1 1 95 3.0E-50 T 22-04-2016 YE3461 cf29645b334be5f9267def4c879edfd7 295 Pfam PF12835 Integrase 104 251 2.2E-58 T 22-04-2016 IPR024456 Integrase catalytic domain, putative YE3461 cf29645b334be5f9267def4c879edfd7 295 Gene3D G3DSA:1.10.150.130 20 85 4.9E-4 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal YE3461 cf29645b334be5f9267def4c879edfd7 295 SUPERFAMILY SSF56349 31 293 9.42E-13 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YE3461 cf29645b334be5f9267def4c879edfd7 295 Pfam PF12834 Phage integrase, N-terminal 1 90 3.0E-36 T 22-04-2016 IPR024457 Putative integrase, N-terminal YE2455 c4535928e1206b5cfde1f3f4d29924b6 121 Gene3D G3DSA:2.160.20.20 1 81 1.2E-14 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like YE2455 c4535928e1206b5cfde1f3f4d29924b6 121 SUPERFAMILY SSF51126 5 94 2.35E-10 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YE1863 d2d4169b55f52b2191bcde49c23f43a9 306 PANTHER PTHR30118 1 300 7.6E-89 T 22-04-2016 YE1863 d2d4169b55f52b2191bcde49c23f43a9 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 8.7E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 YE1863 d2d4169b55f52b2191bcde49c23f43a9 306 PANTHER PTHR30118:SF5 1 300 7.6E-89 T 22-04-2016 YE1863 d2d4169b55f52b2191bcde49c23f43a9 306 Gene3D G3DSA:3.40.190.10 171 263 1.1E-21 T 22-04-2016 YE1863 d2d4169b55f52b2191bcde49c23f43a9 306 SUPERFAMILY SSF46785 2 78 5.06E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1863 d2d4169b55f52b2191bcde49c23f43a9 306 Gene3D G3DSA:3.40.190.10 91 170 4.5E-19 T 22-04-2016 YE1863 d2d4169b55f52b2191bcde49c23f43a9 306 Gene3D G3DSA:3.40.190.10 269 296 4.5E-19 T 22-04-2016 YE1863 d2d4169b55f52b2191bcde49c23f43a9 306 SUPERFAMILY SSF53850 91 293 1.74E-31 T 22-04-2016 YE1863 d2d4169b55f52b2191bcde49c23f43a9 306 Pfam PF03466 LysR substrate binding domain 92 294 5.4E-23 T 22-04-2016 IPR005119 LysR, substrate-binding YE1863 d2d4169b55f52b2191bcde49c23f43a9 306 Gene3D G3DSA:1.10.10.10 2 83 8.7E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1513 76d81e864ce528eebd1ad375ecdf60b4 327 Pfam PF04393 Protein of unknown function (DUF535) 33 310 5.4E-102 T 22-04-2016 IPR007488 Protein of unknown function DUF535 YE1513 76d81e864ce528eebd1ad375ecdf60b4 327 PANTHER PTHR38785 2 316 3.5E-110 T 22-04-2016 YE2916 673eed51097e8baba8be6cc60e85c1b9 272 PANTHER PTHR10794 64 272 3.5E-113 T 22-04-2016 YE2916 673eed51097e8baba8be6cc60e85c1b9 272 Pfam PF02517 CAAX protease self-immunity 173 259 4.2E-18 T 22-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 YE2916 673eed51097e8baba8be6cc60e85c1b9 272 PANTHER PTHR10794:SF54 64 272 3.5E-113 T 22-04-2016 YE0444 b757385e5e2651c385d8a8ed60d6f142 1041 Gene3D G3DSA:3.30.70.1430 39 140 1.8E-32 T 22-04-2016 YE0444 b757385e5e2651c385d8a8ed60d6f142 1041 PANTHER PTHR32063 1 1037 0.0 T 22-04-2016 YE0444 b757385e5e2651c385d8a8ed60d6f142 1041 Pfam PF00873 AcrB/AcrD/AcrF family 2 1025 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE0444 b757385e5e2651c385d8a8ed60d6f142 1041 SUPERFAMILY SSF82693 808 855 1.78E-21 T 22-04-2016 YE0444 b757385e5e2651c385d8a8ed60d6f142 1041 SUPERFAMILY SSF82693 672 721 1.78E-21 T 22-04-2016 YE0444 b757385e5e2651c385d8a8ed60d6f142 1041 Gene3D G3DSA:1.10.3850.10 814 1026 2.5E-50 T 22-04-2016 YE0444 b757385e5e2651c385d8a8ed60d6f142 1041 Gene3D G3DSA:3.30.2090.10 722 808 1.4E-25 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YE0444 b757385e5e2651c385d8a8ed60d6f142 1041 SUPERFAMILY SSF82866 297 498 1.7E-50 T 22-04-2016 YE0444 b757385e5e2651c385d8a8ed60d6f142 1041 SUPERFAMILY SSF82693 39 132 1.66E-25 T 22-04-2016 YE0444 b757385e5e2651c385d8a8ed60d6f142 1041 Gene3D G3DSA:3.30.2090.10 182 276 1.1E-28 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YE0444 b757385e5e2651c385d8a8ed60d6f142 1041 SUPERFAMILY SSF82693 136 183 1.99E-25 T 22-04-2016 YE0444 b757385e5e2651c385d8a8ed60d6f142 1041 SUPERFAMILY SSF82693 275 331 1.99E-25 T 22-04-2016 YE0444 b757385e5e2651c385d8a8ed60d6f142 1041 Gene3D G3DSA:1.20.1640.10 293 507 3.1E-61 T 22-04-2016 YE0444 b757385e5e2651c385d8a8ed60d6f142 1041 SUPERFAMILY SSF82693 565 671 1.46E-29 T 22-04-2016 YE0444 b757385e5e2651c385d8a8ed60d6f142 1041 SUPERFAMILY SSF82714 183 273 4.05E-22 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YE0444 b757385e5e2651c385d8a8ed60d6f142 1041 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1037 0.0 T 22-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 YE0444 b757385e5e2651c385d8a8ed60d6f142 1041 PANTHER PTHR32063:SF13 1 1037 0.0 T 22-04-2016 YE0444 b757385e5e2651c385d8a8ed60d6f142 1041 SUPERFAMILY SSF82714 722 808 1.23E-21 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YE0444 b757385e5e2651c385d8a8ed60d6f142 1041 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 1.2E-109 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE0444 b757385e5e2651c385d8a8ed60d6f142 1041 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 1.2E-109 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE0444 b757385e5e2651c385d8a8ed60d6f142 1041 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 1.2E-109 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE0444 b757385e5e2651c385d8a8ed60d6f142 1041 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 1.2E-109 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE0444 b757385e5e2651c385d8a8ed60d6f142 1041 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 1.2E-109 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE0444 b757385e5e2651c385d8a8ed60d6f142 1041 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 1.2E-109 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE0444 b757385e5e2651c385d8a8ed60d6f142 1041 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 1.2E-109 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE0444 b757385e5e2651c385d8a8ed60d6f142 1041 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 1.2E-109 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE0444 b757385e5e2651c385d8a8ed60d6f142 1041 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 1.2E-109 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 YE0444 b757385e5e2651c385d8a8ed60d6f142 1041 Gene3D G3DSA:3.30.70.1430 567 671 2.8E-35 T 22-04-2016 YE0444 b757385e5e2651c385d8a8ed60d6f142 1041 SUPERFAMILY SSF82866 833 1025 3.14E-38 T 22-04-2016 YE3930 3fda9daf32cf0360a89b79e758bae6a6 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 9.8E-71 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 YE3930 3fda9daf32cf0360a89b79e758bae6a6 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3930 3fda9daf32cf0360a89b79e758bae6a6 124 PANTHER PTHR11652 1 116 2.2E-77 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3930 3fda9daf32cf0360a89b79e758bae6a6 124 SUPERFAMILY SSF50249 3 123 2.23E-52 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE3930 3fda9daf32cf0360a89b79e758bae6a6 124 Pfam PF00164 Ribosomal protein S12/S23 5 123 2.2E-43 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3930 3fda9daf32cf0360a89b79e758bae6a6 124 Gene3D G3DSA:2.40.50.140 1 123 1.2E-65 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold YE3930 3fda9daf32cf0360a89b79e758bae6a6 124 PIRSF PIRSF002133 1 124 1.6E-54 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 YE3930 3fda9daf32cf0360a89b79e758bae6a6 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.507 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 YE3930 3fda9daf32cf0360a89b79e758bae6a6 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 3.1E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 YE3930 3fda9daf32cf0360a89b79e758bae6a6 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 3.1E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 YE3930 3fda9daf32cf0360a89b79e758bae6a6 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 3.1E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 YE3930 3fda9daf32cf0360a89b79e758bae6a6 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 3.1E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 YE3930 3fda9daf32cf0360a89b79e758bae6a6 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 3.1E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 YE3930 3fda9daf32cf0360a89b79e758bae6a6 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 3.1E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 YE3363 c3dda5a0960158e6577467bbe505e180 131 SUPERFAMILY SSF54427 5 128 4.39E-28 T 22-04-2016 IPR032710 NTF2-like domain YE3363 c3dda5a0960158e6577467bbe505e180 131 TIGRFAM TIGR02246 TIGR02246: conserved hypothetical protein 4 121 1.6E-10 T 22-04-2016 IPR011944 Steroid delta5-4-isomerase KEGG: 00140+5.3.3.1|KEGG: 00984+5.3.3.1|MetaCyc: PWY-2582|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-699|MetaCyc: PWY-7299 YE3363 c3dda5a0960158e6577467bbe505e180 131 Gene3D G3DSA:3.10.450.50 4 116 6.8E-15 T 22-04-2016 IPR032710 NTF2-like domain YE3363 c3dda5a0960158e6577467bbe505e180 131 Pfam PF13474 SnoaL-like domain 6 114 8.9E-10 T 22-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain YE3135 a693e43f019aec1dec7243361566a1d6 434 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 262 412 1.3E-40 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 YE3135 a693e43f019aec1dec7243361566a1d6 434 PANTHER PTHR30560:SF3 1 430 2.2E-151 T 22-04-2016 YE3135 a693e43f019aec1dec7243361566a1d6 434 Gene3D G3DSA:1.10.3120.10 216 388 2.3E-62 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 YE3135 a693e43f019aec1dec7243361566a1d6 434 PANTHER PTHR30560 1 430 2.2E-151 T 22-04-2016 YE3135 a693e43f019aec1dec7243361566a1d6 434 Gene3D G3DSA:3.30.70.1050 1 118 6.5E-41 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 YE3135 a693e43f019aec1dec7243361566a1d6 434 SUPERFAMILY SSF109998 248 429 1.31E-48 T 22-04-2016 IPR027304 Trigger factor/SurA domain YE3135 a693e43f019aec1dec7243361566a1d6 434 SUPERFAMILY SSF54534 96 240 1.51E-37 T 22-04-2016 YE3135 a693e43f019aec1dec7243361566a1d6 434 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 2.0E-44 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 YE3135 a693e43f019aec1dec7243361566a1d6 434 SUPERFAMILY SSF102735 1 131 1.03E-41 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 YE3135 a693e43f019aec1dec7243361566a1d6 434 PIRSF PIRSF003095 1 434 7.4E-130 T 22-04-2016 IPR005215 Trigger factor GO:0015031 YE3135 a693e43f019aec1dec7243361566a1d6 434 Hamap MF_00303 Trigger factor [tig]. 1 418 21.951 T 22-04-2016 IPR005215 Trigger factor GO:0015031 YE3135 a693e43f019aec1dec7243361566a1d6 434 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 157 236 1.5E-14 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 YE3135 a693e43f019aec1dec7243361566a1d6 434 Gene3D G3DSA:3.10.50.40 149 215 3.0E-9 T 22-04-2016 YE3135 a693e43f019aec1dec7243361566a1d6 434 TIGRFAM TIGR00115 tig: trigger factor 13 412 9.4E-144 T 22-04-2016 IPR005215 Trigger factor GO:0015031 YE3172 1349d20798dd9b2970eaaefdb7f6eafd 362 Gene3D G3DSA:3.40.1780.10 179 343 3.5E-100 T 22-04-2016 YE3172 1349d20798dd9b2970eaaefdb7f6eafd 362 Gene3D G3DSA:3.40.1780.10 1 62 3.5E-100 T 22-04-2016 YE3172 1349d20798dd9b2970eaaefdb7f6eafd 362 PANTHER PTHR30307:SF0 2 350 2.0E-189 T 22-04-2016 YE3172 1349d20798dd9b2970eaaefdb7f6eafd 362 SUPERFAMILY SSF111337 1 343 1.7E-137 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 YE3172 1349d20798dd9b2970eaaefdb7f6eafd 362 Gene3D G3DSA:2.40.10.240 64 142 1.1E-19 T 22-04-2016 YE3172 1349d20798dd9b2970eaaefdb7f6eafd 362 Pfam PF02547 Queuosine biosynthesis protein 4 343 2.0E-131 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 YE3172 1349d20798dd9b2970eaaefdb7f6eafd 362 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 343 1.3E-159 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 YE3172 1349d20798dd9b2970eaaefdb7f6eafd 362 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 344 47.064 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 YE3172 1349d20798dd9b2970eaaefdb7f6eafd 362 PANTHER PTHR30307 2 350 2.0E-189 T 22-04-2016 YE1675 1c9b0f6397ec3d9a29ae6de72da4245f 236 Pfam PF05944 Phage small terminase subunit 34 167 3.1E-40 T 22-04-2016 IPR010270 Bacteriophage P2, GpM GO:0003677|GO:0004519|GO:0019069 YE0868 7a780922ed0e74eab638003435f5910e 318 Gene3D G3DSA:1.20.1170.10 229 307 5.7E-4 T 22-04-2016 YE0868 7a780922ed0e74eab638003435f5910e 318 Pfam PF05929 Phage capsid scaffolding protein (GPO) serine peptidase 9 278 2.0E-45 T 22-04-2016 IPR009228 Capsid scaffolding protein GpO GO:0019069 YE1856 e4170721f031bbc34adeeeb534488d23 336 PANTHER PTHR37089:SF1 13 336 1.7E-86 T 22-04-2016 YE1856 e4170721f031bbc34adeeeb534488d23 336 Pfam PF05229 Spore Coat Protein U domain 32 170 2.2E-11 T 22-04-2016 IPR007893 Spore coat protein U YE1856 e4170721f031bbc34adeeeb534488d23 336 Pfam PF05229 Spore Coat Protein U domain 201 331 2.9E-25 T 22-04-2016 IPR007893 Spore coat protein U YE1856 e4170721f031bbc34adeeeb534488d23 336 PANTHER PTHR37089 13 336 1.7E-86 T 22-04-2016 YE1856 e4170721f031bbc34adeeeb534488d23 336 SUPERFAMILY SSF49401 213 336 6.46E-6 T 22-04-2016 IPR008966 Adhesion domain YE1856 e4170721f031bbc34adeeeb534488d23 336 SMART SM00972 277 333 1.6E-13 T 22-04-2016 IPR007893 Spore coat protein U YE1856 e4170721f031bbc34adeeeb534488d23 336 SMART SM00972 105 172 0.0048 T 22-04-2016 IPR007893 Spore coat protein U YE4008 93a47c2323470ba452057103dbad2460 504 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 9 26 - T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 YE4008 93a47c2323470ba452057103dbad2460 504 Gene3D G3DSA:3.50.50.60 2 277 9.1E-40 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE4008 93a47c2323470ba452057103dbad2460 504 SUPERFAMILY SSF51905 312 375 9.85E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE4008 93a47c2323470ba452057103dbad2460 504 SUPERFAMILY SSF51905 1 260 9.85E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE4008 93a47c2323470ba452057103dbad2460 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 17 27 4.8E-28 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 YE4008 93a47c2323470ba452057103dbad2460 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 78 90 4.8E-28 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 YE4008 93a47c2323470ba452057103dbad2460 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 313 319 4.8E-28 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 YE4008 93a47c2323470ba452057103dbad2460 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 33 45 4.8E-28 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 YE4008 93a47c2323470ba452057103dbad2460 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 4 16 4.8E-28 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 YE4008 93a47c2323470ba452057103dbad2460 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 347 359 4.8E-28 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 YE4008 93a47c2323470ba452057103dbad2460 504 Pfam PF01266 FAD dependent oxidoreductase 5 323 1.1E-47 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 YE4008 93a47c2323470ba452057103dbad2460 504 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 381 489 1.0E-11 T 22-04-2016 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 YE4008 93a47c2323470ba452057103dbad2460 504 SUPERFAMILY SSF54373 226 319 4.32E-8 T 22-04-2016 YE4008 93a47c2323470ba452057103dbad2460 504 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 352 362 - T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 YE4008 93a47c2323470ba452057103dbad2460 504 PANTHER PTHR11985 5 491 2.8E-197 T 22-04-2016 YE2218 00d8a410a133441711c18052456af47c 255 Hamap MF_01067 UPF0259 membrane protein YciC [yciC]. 1 250 23.922 T 22-04-2016 IPR009627 Uncharacterised protein family UPF0259 YE2218 00d8a410a133441711c18052456af47c 255 Pfam PF06790 Uncharacterised protein family (UPF0259) 1 247 7.9E-93 T 22-04-2016 IPR009627 Uncharacterised protein family UPF0259 YE0330 b0fc01f7fd31afd3a55fd674a3bab18b 345 Pfam PF05171 Haemin-degrading HemS.ChuX domain 29 157 1.7E-43 T 22-04-2016 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 YE0330 b0fc01f7fd31afd3a55fd674a3bab18b 345 Pfam PF05171 Haemin-degrading HemS.ChuX domain 207 338 5.5E-41 T 22-04-2016 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 YE0330 b0fc01f7fd31afd3a55fd674a3bab18b 345 Gene3D G3DSA:3.40.1570.10 5 143 2.4E-8 T 22-04-2016 YE0330 b0fc01f7fd31afd3a55fd674a3bab18b 345 Gene3D G3DSA:3.40.1570.10 188 340 2.5E-8 T 22-04-2016 YE0330 b0fc01f7fd31afd3a55fd674a3bab18b 345 SUPERFAMILY SSF144064 4 338 2.94E-132 T 22-04-2016 YE0534 2eebab73a32613d284d6cc2663c90579 502 PANTHER PTHR11785:SF77 3 187 1.6E-212 T 22-04-2016 YE0534 2eebab73a32613d284d6cc2663c90579 502 PANTHER PTHR11785:SF77 217 502 1.6E-212 T 22-04-2016 YE0534 2eebab73a32613d284d6cc2663c90579 502 PANTHER PTHR11785 3 187 1.6E-212 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YE0534 2eebab73a32613d284d6cc2663c90579 502 PANTHER PTHR11785 217 502 1.6E-212 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YE0534 2eebab73a32613d284d6cc2663c90579 502 Pfam PF13520 Amino acid permease 9 442 3.3E-61 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YE0534 2eebab73a32613d284d6cc2663c90579 502 PIRSF PIRSF006060 1 501 1.1E-41 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 YE3182 846aca97fd79398e5810c8dcf0c9cb4a 229 Gene3D G3DSA:1.10.10.10 129 226 3.4E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3182 846aca97fd79398e5810c8dcf0c9cb4a 229 PANTHER PTHR26402:SF576 3 229 3.4E-154 T 22-04-2016 YE3182 846aca97fd79398e5810c8dcf0c9cb4a 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 1.1E-27 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YE3182 846aca97fd79398e5810c8dcf0c9cb4a 229 SMART SM00862 150 225 5.5E-27 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YE3182 846aca97fd79398e5810c8dcf0c9cb4a 229 SMART SM00448 3 116 6.1E-44 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE3182 846aca97fd79398e5810c8dcf0c9cb4a 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 2.5E-114 T 22-04-2016 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 YE3182 846aca97fd79398e5810c8dcf0c9cb4a 229 Gene3D G3DSA:3.40.50.2300 3 124 2.1E-40 T 22-04-2016 YE3182 846aca97fd79398e5810c8dcf0c9cb4a 229 Pfam PF00072 Response regulator receiver domain 5 117 1.3E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE3182 846aca97fd79398e5810c8dcf0c9cb4a 229 PANTHER PTHR26402 3 229 3.4E-154 T 22-04-2016 YE3182 846aca97fd79398e5810c8dcf0c9cb4a 229 SUPERFAMILY SSF52172 3 126 1.57E-42 T 22-04-2016 IPR011006 CheY-like superfamily YE3182 846aca97fd79398e5810c8dcf0c9cb4a 229 SUPERFAMILY SSF46894 129 226 7.94E-32 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YE3102 69aa20cbc0035c34f51407bdca73ea98 120 Pfam PF00874 PRD domain 25 106 9.0E-9 T 22-04-2016 IPR011608 PRD domain GO:0006355 YE3102 69aa20cbc0035c34f51407bdca73ea98 120 Gene3D G3DSA:1.10.1790.10 24 108 8.9E-8 T 22-04-2016 IPR011608 PRD domain GO:0006355 YE3102 69aa20cbc0035c34f51407bdca73ea98 120 SUPERFAMILY SSF63520 24 110 1.2E-9 T 22-04-2016 IPR011608 PRD domain GO:0006355 YE2019 e0f32666bf7a3f78f603c5c4220ad431 294 ProSitePatterns PS00146 Beta-lactamase class-A active site. 71 86 - T 22-04-2016 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 YE2019 e0f32666bf7a3f78f603c5c4220ad431 294 SUPERFAMILY SSF56601 34 293 1.66E-77 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YE2019 e0f32666bf7a3f78f603c5c4220ad431 294 PANTHER PTHR35333:SF2 34 293 2.1E-90 T 22-04-2016 YE2019 e0f32666bf7a3f78f603c5c4220ad431 294 Gene3D G3DSA:3.40.710.10 35 292 2.1E-105 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YE2019 e0f32666bf7a3f78f603c5c4220ad431 294 PANTHER PTHR35333 34 293 2.1E-90 T 22-04-2016 YE2019 e0f32666bf7a3f78f603c5c4220ad431 294 Pfam PF13354 Beta-lactamase enzyme family 60 266 6.9E-42 T 22-04-2016 YE2019 e0f32666bf7a3f78f603c5c4220ad431 294 PRINTS PR00118 Beta-lactamase class A signature 173 198 4.9E-67 T 22-04-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 YE2019 e0f32666bf7a3f78f603c5c4220ad431 294 PRINTS PR00118 Beta-lactamase class A signature 69 86 4.9E-67 T 22-04-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 YE2019 e0f32666bf7a3f78f603c5c4220ad431 294 PRINTS PR00118 Beta-lactamase class A signature 226 241 4.9E-67 T 22-04-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 YE2019 e0f32666bf7a3f78f603c5c4220ad431 294 PRINTS PR00118 Beta-lactamase class A signature 38 62 4.9E-67 T 22-04-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 YE2019 e0f32666bf7a3f78f603c5c4220ad431 294 PRINTS PR00118 Beta-lactamase class A signature 209 224 4.9E-67 T 22-04-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 YE2019 e0f32666bf7a3f78f603c5c4220ad431 294 PRINTS PR00118 Beta-lactamase class A signature 111 136 4.9E-67 T 22-04-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 YE2019 e0f32666bf7a3f78f603c5c4220ad431 294 PRINTS PR00118 Beta-lactamase class A signature 147 171 4.9E-67 T 22-04-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 YE3460 0611a4c3cef318bca193c02e53361a3b 333 Pfam PF08401 Domain of unknown function (DUF1738) 15 143 3.9E-37 T 22-04-2016 IPR013610 Domain of unknown function DUF1738 YE3460 0611a4c3cef318bca193c02e53361a3b 333 PIRSF PIRSF037112 2 329 4.6E-120 T 22-04-2016 IPR017113 Antirestriction, ArdC YE1831 6568929f1c4196cb78f0ef125d353a8d 218 Gene3D G3DSA:1.10.10.10 120 210 5.6E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1831 6568929f1c4196cb78f0ef125d353a8d 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 9.4E-21 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE1831 6568929f1c4196cb78f0ef125d353a8d 218 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE1831 6568929f1c4196cb78f0ef125d353a8d 218 SUPERFAMILY SSF46894 138 210 4.08E-19 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YE1831 6568929f1c4196cb78f0ef125d353a8d 218 Pfam PF00072 Response regulator receiver domain 4 116 5.9E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE1831 6568929f1c4196cb78f0ef125d353a8d 218 SUPERFAMILY SSF52172 3 131 1.57E-32 T 22-04-2016 IPR011006 CheY-like superfamily YE1831 6568929f1c4196cb78f0ef125d353a8d 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 9.8E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE1831 6568929f1c4196cb78f0ef125d353a8d 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 9.8E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE1831 6568929f1c4196cb78f0ef125d353a8d 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 9.8E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE1831 6568929f1c4196cb78f0ef125d353a8d 218 SMART SM00448 2 115 8.4E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE1831 6568929f1c4196cb78f0ef125d353a8d 218 PANTHER PTHR26402 2 215 8.9E-111 T 22-04-2016 YE1831 6568929f1c4196cb78f0ef125d353a8d 218 PANTHER PTHR26402:SF506 2 215 8.9E-111 T 22-04-2016 YE1831 6568929f1c4196cb78f0ef125d353a8d 218 SMART SM00421 146 203 1.5E-18 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE1831 6568929f1c4196cb78f0ef125d353a8d 218 Gene3D G3DSA:3.40.50.2300 2 119 8.9E-34 T 22-04-2016 YE2017 5e0a8529bedc47c0de30308c2b2394b1 239 SMART SM00421 160 217 2.0E-7 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE2017 5e0a8529bedc47c0de30308c2b2394b1 239 Gene3D G3DSA:1.10.10.10 158 222 1.4E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2017 5e0a8529bedc47c0de30308c2b2394b1 239 SUPERFAMILY SSF46894 145 222 4.42E-15 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YE2017 5e0a8529bedc47c0de30308c2b2394b1 239 Pfam PF08448 PAS fold 30 133 1.1E-5 T 22-04-2016 IPR013656 PAS fold-4 YE2017 5e0a8529bedc47c0de30308c2b2394b1 239 Pfam PF00196 Bacterial regulatory proteins, luxR family 163 216 1.1E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE1477 e56e84a4ebf8fa6074839100ec884435 256 SUPERFAMILY SSF48317 35 245 1.1E-11 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YE1477 e56e84a4ebf8fa6074839100ec884435 256 Gene3D G3DSA:1.20.144.10 96 225 3.4E-8 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YE1477 e56e84a4ebf8fa6074839100ec884435 256 Pfam PF01569 PAP2 superfamily 125 245 1.3E-7 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YE1208 f19dd5b9619ec64e4a42dcc8f78c8cd9 322 PANTHER PTHR10314:SF110 3 319 2.7E-160 T 22-04-2016 YE1208 f19dd5b9619ec64e4a42dcc8f78c8cd9 322 Gene3D G3DSA:3.40.50.1100 36 131 6.4E-38 T 22-04-2016 YE1208 f19dd5b9619ec64e4a42dcc8f78c8cd9 322 PANTHER PTHR10314 3 319 2.7E-160 T 22-04-2016 YE1208 f19dd5b9619ec64e4a42dcc8f78c8cd9 322 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 22-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 YE1208 f19dd5b9619ec64e4a42dcc8f78c8cd9 322 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 299 4.0E-70 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YE1208 f19dd5b9619ec64e4a42dcc8f78c8cd9 322 Gene3D G3DSA:3.40.50.1100 132 313 1.2E-74 T 22-04-2016 YE1208 f19dd5b9619ec64e4a42dcc8f78c8cd9 322 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 311 2.7E-136 T 22-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 YE1208 f19dd5b9619ec64e4a42dcc8f78c8cd9 322 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 311 1.6E-143 T 22-04-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 YE1208 f19dd5b9619ec64e4a42dcc8f78c8cd9 322 SUPERFAMILY SSF53686 4 309 7.86E-98 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YE0332 e206a4f141608fb16951147495b118b6 81 Pfam PF10636 Hemin uptake protein hemP 46 81 4.7E-17 T 22-04-2016 IPR019600 Hemin uptake protein HemP YE0332 e206a4f141608fb16951147495b118b6 81 Gene3D G3DSA:2.10.70.10 45 81 1.4E-16 T 22-04-2016 YE1242 705c4de3f3457cd6ab0a96a1dd56a062 364 Pfam PF13406 Transglycosylase SLT domain 63 355 1.9E-90 T 22-04-2016 IPR031304 Transglycosylase SLT domain 2 YE1242 705c4de3f3457cd6ab0a96a1dd56a062 364 SUPERFAMILY SSF53955 57 357 1.41E-91 T 22-04-2016 IPR023346 Lysozyme-like domain YE1242 705c4de3f3457cd6ab0a96a1dd56a062 364 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 67 358 9.2E-120 T 22-04-2016 IPR011757 Lytic transglycosylase MltB YE1242 705c4de3f3457cd6ab0a96a1dd56a062 364 PANTHER PTHR30163:SF0 1 362 4.1E-212 T 22-04-2016 YE1242 705c4de3f3457cd6ab0a96a1dd56a062 364 PANTHER PTHR30163 1 362 4.1E-212 T 22-04-2016 IPR011757 Lytic transglycosylase MltB YE1242 705c4de3f3457cd6ab0a96a1dd56a062 364 Gene3D G3DSA:1.10.530.10 116 169 5.0E-57 T 22-04-2016 YE1242 705c4de3f3457cd6ab0a96a1dd56a062 364 Gene3D G3DSA:1.10.530.10 250 360 5.0E-57 T 22-04-2016 YE2979 b20c6474ea4de7112db59d37b14fa168 266 PANTHER PTHR11280 1 263 2.5E-178 T 22-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 YE2979 b20c6474ea4de7112db59d37b14fa168 266 SUPERFAMILY SSF100950 1 264 1.88E-104 T 22-04-2016 YE2979 b20c6474ea4de7112db59d37b14fa168 266 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 22-04-2016 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 YE2979 b20c6474ea4de7112db59d37b14fa168 266 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 40.663 T 22-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 YE2979 b20c6474ea4de7112db59d37b14fa168 266 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 230 4.0E-21 T 22-04-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 YE2979 b20c6474ea4de7112db59d37b14fa168 266 Gene3D G3DSA:3.40.50.1360 1 264 2.3E-112 T 22-04-2016 YE2979 b20c6474ea4de7112db59d37b14fa168 266 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 259 9.8E-137 T 22-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 YE1238 6cf32d603ad34f7cd3fd937fdba58d54 212 Pfam PF01810 LysE type translocator 17 208 3.8E-44 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 YE1238 6cf32d603ad34f7cd3fd937fdba58d54 212 TIGRFAM TIGR00949 2A76: homoserine/Threonine efflux protein 20 204 7.6E-72 T 22-04-2016 IPR004778 Homoserine/Threonine efflux protein GO:0016021 YE1238 6cf32d603ad34f7cd3fd937fdba58d54 212 PANTHER PTHR30086 2 212 6.1E-105 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 YE1238 6cf32d603ad34f7cd3fd937fdba58d54 212 PANTHER PTHR30086:SF11 2 212 6.1E-105 T 22-04-2016 YE1238 6cf32d603ad34f7cd3fd937fdba58d54 212 PIRSF PIRSF006324 1 209 2.4E-43 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 YE2738 21518884eed87a6b3d920d3e83fedb55 165 Pfam PF15953 Putative propanediol utilisation 9 160 1.0E-42 T 22-04-2016 IPR030992 Microcompartment protein PduM GO:0005198 YE2738 21518884eed87a6b3d920d3e83fedb55 165 TIGRFAM TIGR04493 microcomp_PduM: microcompartment protein PduM 9 161 2.4E-56 T 22-04-2016 IPR030992 Microcompartment protein PduM GO:0005198 YE1080 dc20e58d39ea7a8d65dd848dfe570561 458 PANTHER PTHR30008 2 455 1.6E-196 T 22-04-2016 YE1080 dc20e58d39ea7a8d65dd848dfe570561 458 PANTHER PTHR30008:SF0 2 455 1.6E-196 T 22-04-2016 YE1080 dc20e58d39ea7a8d65dd848dfe570561 458 Pfam PF13742 OB-fold nucleic acid binding domain 10 103 1.3E-32 T 22-04-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 YE1080 dc20e58d39ea7a8d65dd848dfe570561 458 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 11 354 5.1E-137 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 YE1080 dc20e58d39ea7a8d65dd848dfe570561 458 Pfam PF02601 Exonuclease VII, large subunit 126 440 2.5E-102 T 22-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 YE1080 dc20e58d39ea7a8d65dd848dfe570561 458 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 7 443 30.491 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 YE3712 fc45834e62193cd1f4771f97984e196f 230 PANTHER PTHR30353:SF11 1 230 2.1E-181 T 22-04-2016 YE3712 fc45834e62193cd1f4771f97984e196f 230 Pfam PF09335 SNARE associated Golgi protein 48 172 1.0E-19 T 22-04-2016 IPR032816 SNARE associated Golgi protein YE3712 fc45834e62193cd1f4771f97984e196f 230 PANTHER PTHR30353 1 230 2.1E-181 T 22-04-2016 IPR032818 DedA family YE0013 256426785d802cdf4531a40c076a908b 474 PANTHER PTHR23501:SF1 1 468 1.0E-302 T 22-04-2016 YE0013 256426785d802cdf4531a40c076a908b 474 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 17 431 5.8E-71 T 22-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 YE0013 256426785d802cdf4531a40c076a908b 474 Gene3D G3DSA:1.20.1250.20 258 452 3.6E-15 T 22-04-2016 YE0013 256426785d802cdf4531a40c076a908b 474 Pfam PF07690 Major Facilitator Superfamily 16 405 2.8E-42 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YE0013 256426785d802cdf4531a40c076a908b 474 PRINTS PR01036 Tetracycline resistance protein TetB signature 135 159 3.5E-6 T 22-04-2016 YE0013 256426785d802cdf4531a40c076a908b 474 PRINTS PR01036 Tetracycline resistance protein TetB signature 14 38 3.5E-6 T 22-04-2016 YE0013 256426785d802cdf4531a40c076a908b 474 PRINTS PR01036 Tetracycline resistance protein TetB signature 396 415 3.5E-6 T 22-04-2016 YE0013 256426785d802cdf4531a40c076a908b 474 PRINTS PR01036 Tetracycline resistance protein TetB signature 105 125 3.5E-6 T 22-04-2016 YE0013 256426785d802cdf4531a40c076a908b 474 SUPERFAMILY SSF103473 13 194 2.09E-57 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE0013 256426785d802cdf4531a40c076a908b 474 SUPERFAMILY SSF103473 244 452 2.09E-57 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE0013 256426785d802cdf4531a40c076a908b 474 Gene3D G3DSA:1.20.1250.20 13 181 4.5E-24 T 22-04-2016 YE0013 256426785d802cdf4531a40c076a908b 474 PANTHER PTHR23501 1 468 1.0E-302 T 22-04-2016 YE3644 c3f9ce50ef4256b2c6f68b29ed12dcc5 459 SUPERFAMILY SSF53300 298 442 3.71E-12 T 22-04-2016 IPR002035 von Willebrand factor, type A YE3644 c3f9ce50ef4256b2c6f68b29ed12dcc5 459 SUPERFAMILY SSF53300 161 220 3.71E-12 T 22-04-2016 IPR002035 von Willebrand factor, type A YE3644 c3f9ce50ef4256b2c6f68b29ed12dcc5 459 Gene3D G3DSA:3.40.50.410 161 222 3.5E-8 T 22-04-2016 IPR002035 von Willebrand factor, type A YE3644 c3f9ce50ef4256b2c6f68b29ed12dcc5 459 Gene3D G3DSA:3.40.50.410 301 446 3.5E-8 T 22-04-2016 IPR002035 von Willebrand factor, type A YE3644 c3f9ce50ef4256b2c6f68b29ed12dcc5 459 Pfam PF00092 von Willebrand factor type A domain 305 436 9.1E-6 T 22-04-2016 IPR002035 von Willebrand factor, type A YE3964 96a29c61d91ade29988a306266ad108d 435 SUPERFAMILY SSF51556 66 385 4.99E-107 T 22-04-2016 IPR032466 Metal-dependent hydrolase YE3964 96a29c61d91ade29988a306266ad108d 435 PANTHER PTHR32027 1 435 4.7E-187 T 22-04-2016 YE3964 96a29c61d91ade29988a306266ad108d 435 Gene3D G3DSA:3.20.20.140 74 376 3.0E-124 T 22-04-2016 YE3964 96a29c61d91ade29988a306266ad108d 435 Pfam PF07969 Amidohydrolase family 56 414 1.0E-52 T 22-04-2016 IPR013108 Amidohydrolase 3 YE3964 96a29c61d91ade29988a306266ad108d 435 SUPERFAMILY SSF51338 15 71 6.31E-8 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YE3964 96a29c61d91ade29988a306266ad108d 435 Gene3D G3DSA:2.30.40.10 30 73 2.3E-7 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 YE3964 96a29c61d91ade29988a306266ad108d 435 PANTHER PTHR32027:SF0 1 435 4.7E-187 T 22-04-2016 YE2237 68301db549028c22c04ccf63717b1bba 214 PANTHER PTHR33508 4 214 1.0E-103 T 22-04-2016 YE2237 68301db549028c22c04ccf63717b1bba 214 PANTHER PTHR33508:SF1 4 214 1.0E-103 T 22-04-2016 YE2237 68301db549028c22c04ccf63717b1bba 214 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 8 206 7.6E-80 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 YE2237 68301db549028c22c04ccf63717b1bba 214 Pfam PF01914 MarC family integral membrane protein 10 210 2.2E-73 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 YE0935 897c5c9253a509a888fcc9353d8ce0e0 335 PANTHER PTHR11019:SF65 224 334 9.2E-26 T 22-04-2016 YE0935 897c5c9253a509a888fcc9353d8ce0e0 335 Pfam PF12833 Helix-turn-helix domain 249 327 2.5E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YE0935 897c5c9253a509a888fcc9353d8ce0e0 335 SUPERFAMILY SSF46689 279 329 1.43E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE0935 897c5c9253a509a888fcc9353d8ce0e0 335 Gene3D G3DSA:1.10.10.60 280 330 3.8E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE0935 897c5c9253a509a888fcc9353d8ce0e0 335 PANTHER PTHR11019 224 334 9.2E-26 T 22-04-2016 YE0935 897c5c9253a509a888fcc9353d8ce0e0 335 SMART SM00342 243 326 6.9E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 YE0935 897c5c9253a509a888fcc9353d8ce0e0 335 Gene3D G3DSA:1.10.10.60 237 279 4.3E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE1742 6c581f5658330b73f28ec610ad57444b 304 SUPERFAMILY SSF103481 37 138 5.49E-13 T 22-04-2016 YE1742 6c581f5658330b73f28ec610ad57444b 304 PANTHER PTHR32322:SF8 1 285 2.4E-52 T 22-04-2016 YE1742 6c581f5658330b73f28ec610ad57444b 304 Pfam PF00892 EamA-like transporter family 3 135 9.6E-10 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YE1742 6c581f5658330b73f28ec610ad57444b 304 Pfam PF00892 EamA-like transporter family 151 286 4.9E-14 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 YE1742 6c581f5658330b73f28ec610ad57444b 304 SUPERFAMILY SSF103481 189 289 2.09E-8 T 22-04-2016 YE1742 6c581f5658330b73f28ec610ad57444b 304 PANTHER PTHR32322 1 285 2.4E-52 T 22-04-2016 YE2912 a1e2865d303a88f4a5205e43aa2f00cb 231 Gene3D G3DSA:1.10.3720.10 7 226 1.4E-46 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE2912 a1e2865d303a88f4a5205e43aa2f00cb 231 SUPERFAMILY SSF161098 5 219 2.75E-52 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE2912 a1e2865d303a88f4a5205e43aa2f00cb 231 PANTHER PTHR30183 1 227 1.1E-93 T 22-04-2016 YE2912 a1e2865d303a88f4a5205e43aa2f00cb 231 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 26 227 1.9E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE2912 a1e2865d303a88f4a5205e43aa2f00cb 231 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 12 220 5.1E-76 T 22-04-2016 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 YE2185 850ecf1797101a1d26c0e477b0bf9ed9 154 PANTHER PTHR21666:SF210 35 154 1.0E-40 T 22-04-2016 YE2185 850ecf1797101a1d26c0e477b0bf9ed9 154 Pfam PF00877 NlpC/P60 family 47 153 5.2E-28 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- YE2185 850ecf1797101a1d26c0e477b0bf9ed9 154 Gene3D G3DSA:3.90.1720.10 36 154 5.1E-39 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- YE2185 850ecf1797101a1d26c0e477b0bf9ed9 154 SUPERFAMILY SSF54001 33 154 3.68E-38 T 22-04-2016 YE2185 850ecf1797101a1d26c0e477b0bf9ed9 154 PANTHER PTHR21666 35 154 1.0E-40 T 22-04-2016 YE3648 4c9752c9b7caba7a9c8d71139c09bb6f 220 PANTHER PTHR30353:SF10 1 220 5.5E-163 T 22-04-2016 YE3648 4c9752c9b7caba7a9c8d71139c09bb6f 220 Pfam PF09335 SNARE associated Golgi protein 48 172 4.7E-17 T 22-04-2016 IPR032816 SNARE associated Golgi protein YE3648 4c9752c9b7caba7a9c8d71139c09bb6f 220 PANTHER PTHR30353 1 220 5.5E-163 T 22-04-2016 IPR032818 DedA family YE3483 3f32a0cc0cc8555af683512dd2420760 134 TIGRFAM TIGR03751 conj_TIGR03751: conjugative transfer region lipoprotein, TIGR03751 family 14 131 2.9E-47 T 22-04-2016 IPR022262 Lipoprotein, putative YE1335 65fbec93006d73c08b119e5b36b4f229 151 Pfam PF04217 Protein of unknown function, DUF412 11 149 5.8E-60 T 22-04-2016 IPR007334 Uncharacterised protein family UPF0208 YE1335 65fbec93006d73c08b119e5b36b4f229 151 Hamap MF_01101 UPF0208 membrane protein YfbV [yfbV]. 9 151 36.378 T 22-04-2016 IPR007334 Uncharacterised protein family UPF0208 YE1570 a435f715b7f1dd8b34bb3850e8b85a90 370 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 298 362 7.9E-12 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YE1570 a435f715b7f1dd8b34bb3850e8b85a90 370 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 323 331 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 YE1570 a435f715b7f1dd8b34bb3850e8b85a90 370 SUPERFAMILY SSF54292 284 367 1.44E-20 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 YE1570 a435f715b7f1dd8b34bb3850e8b85a90 370 SUPERFAMILY SSF50800 148 264 2.77E-16 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain YE1570 a435f715b7f1dd8b34bb3850e8b85a90 370 SUPERFAMILY SSF50800 3 51 2.77E-16 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain YE1570 a435f715b7f1dd8b34bb3850e8b85a90 370 PANTHER PTHR14237 2 267 5.1E-96 T 22-04-2016 YE1570 a435f715b7f1dd8b34bb3850e8b85a90 370 Pfam PF03473 MOSC domain 140 262 4.7E-28 T 22-04-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 YE1570 a435f715b7f1dd8b34bb3850e8b85a90 370 SUPERFAMILY SSF141673 5 133 5.36E-29 T 22-04-2016 YE1570 a435f715b7f1dd8b34bb3850e8b85a90 370 Gene3D G3DSA:3.10.20.30 282 367 2.7E-19 T 22-04-2016 IPR012675 Beta-grasp domain YE1570 a435f715b7f1dd8b34bb3850e8b85a90 370 Pfam PF03476 MOSC N-terminal beta barrel domain 3 117 3.4E-29 T 22-04-2016 IPR005303 MOSC, N-terminal beta barrel YE2398 52f8e3ed0be9050a650921e7967a8cbd 198 PANTHER PTHR11080:SF37 8 196 1.4E-64 T 22-04-2016 YE2398 52f8e3ed0be9050a650921e7967a8cbd 198 SUPERFAMILY SSF52499 8 196 6.8E-48 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 YE2398 52f8e3ed0be9050a650921e7967a8cbd 198 Gene3D G3DSA:3.40.50.850 4 194 3.2E-51 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 YE2398 52f8e3ed0be9050a650921e7967a8cbd 198 PANTHER PTHR11080 8 196 1.4E-64 T 22-04-2016 YE2398 52f8e3ed0be9050a650921e7967a8cbd 198 Pfam PF00857 Isochorismatase family 15 187 2.5E-38 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 YE1691 4d3b082a32b93706576382b2986f58be 99 Pfam PF01381 Helix-turn-helix 9 51 4.8E-8 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YE1691 4d3b082a32b93706576382b2986f58be 99 SMART SM00530 8 65 2.1E-5 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 YE1691 4d3b082a32b93706576382b2986f58be 99 Gene3D G3DSA:1.10.260.40 8 69 3.2E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE1691 4d3b082a32b93706576382b2986f58be 99 SUPERFAMILY SSF47413 4 54 1.56E-9 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE1719 52f298a0c6e843720c8c03338c6c41fd 207 SUPERFAMILY SSF56925 20 207 5.23E-11 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YE1719 52f298a0c6e843720c8c03338c6c41fd 207 Pfam PF13505 Outer membrane protein beta-barrel domain 7 187 8.9E-10 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel YE1719 52f298a0c6e843720c8c03338c6c41fd 207 Gene3D G3DSA:2.40.160.20 9 207 3.0E-5 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 YE2281 5a1d5f2b98eb53b4c1e88f6f4ecc1272 434 SUPERFAMILY SSF51905 107 271 6.86E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE2281 5a1d5f2b98eb53b4c1e88f6f4ecc1272 434 SUPERFAMILY SSF51905 1 54 6.86E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE2281 5a1d5f2b98eb53b4c1e88f6f4ecc1272 434 SUPERFAMILY SSF51905 359 416 6.86E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE2281 5a1d5f2b98eb53b4c1e88f6f4ecc1272 434 PANTHER PTHR13847 1 63 7.5E-261 T 22-04-2016 YE2281 5a1d5f2b98eb53b4c1e88f6f4ecc1272 434 PANTHER PTHR13847 107 434 7.5E-261 T 22-04-2016 YE2281 5a1d5f2b98eb53b4c1e88f6f4ecc1272 434 Gene3D G3DSA:3.50.50.60 1 55 1.8E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE2281 5a1d5f2b98eb53b4c1e88f6f4ecc1272 434 Gene3D G3DSA:3.50.50.60 190 269 1.8E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE2281 5a1d5f2b98eb53b4c1e88f6f4ecc1272 434 Gene3D G3DSA:3.50.50.60 359 417 1.8E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE2281 5a1d5f2b98eb53b4c1e88f6f4ecc1272 434 Gene3D G3DSA:3.50.50.60 108 122 1.8E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE2281 5a1d5f2b98eb53b4c1e88f6f4ecc1272 434 Gene3D G3DSA:3.30.9.10 270 358 2.2E-15 T 22-04-2016 YE2281 5a1d5f2b98eb53b4c1e88f6f4ecc1272 434 Gene3D G3DSA:3.30.9.10 135 189 2.2E-15 T 22-04-2016 YE2281 5a1d5f2b98eb53b4c1e88f6f4ecc1272 434 PANTHER PTHR13847:SF148 1 63 7.5E-261 T 22-04-2016 YE2281 5a1d5f2b98eb53b4c1e88f6f4ecc1272 434 PANTHER PTHR13847:SF148 107 434 7.5E-261 T 22-04-2016 YE2281 5a1d5f2b98eb53b4c1e88f6f4ecc1272 434 SUPERFAMILY SSF54373 269 359 3.14E-17 T 22-04-2016 YE2281 5a1d5f2b98eb53b4c1e88f6f4ecc1272 434 Pfam PF01266 FAD dependent oxidoreductase 2 397 6.3E-71 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 YE2281 5a1d5f2b98eb53b4c1e88f6f4ecc1272 434 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 410 52.125 T 22-04-2016 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 UniPathway: UPA00043 YE2515 989165c26ede928e8f620fa522de0740 220 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 214 4.4E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE2515 989165c26ede928e8f620fa522de0740 220 SUPERFAMILY SSF161098 13 206 4.45E-49 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE2515 989165c26ede928e8f620fa522de0740 220 PANTHER PTHR30614:SF18 5 220 5.5E-122 T 22-04-2016 YE2515 989165c26ede928e8f620fa522de0740 220 PANTHER PTHR30614 5 220 5.5E-122 T 22-04-2016 YE2515 989165c26ede928e8f620fa522de0740 220 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 109 1.7E-32 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 YE2515 989165c26ede928e8f620fa522de0740 220 Gene3D G3DSA:1.10.3720.10 11 216 1.4E-54 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE1796 f2fb6d34020efca1d46be38cdc843c22 128 SUPERFAMILY SSF81296 30 128 5.46E-27 T 22-04-2016 IPR014756 Immunoglobulin E-set YE1796 f2fb6d34020efca1d46be38cdc843c22 128 PANTHER PTHR34820:SF1 5 127 1.0E-16 T 22-04-2016 IPR032694 Copper transport protein YcnJ GO:0006825 YE1796 f2fb6d34020efca1d46be38cdc843c22 128 Pfam PF04234 CopC domain 31 127 4.7E-24 T 22-04-2016 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 YE1796 f2fb6d34020efca1d46be38cdc843c22 128 Gene3D G3DSA:2.60.40.1220 30 128 1.6E-31 T 22-04-2016 IPR014755 Copper resistance protein CopC/internalin, immunoglobulin-like YE1796 f2fb6d34020efca1d46be38cdc843c22 128 PANTHER PTHR34820 5 127 1.0E-16 T 22-04-2016 YE1043 4f65d71ecc75a34c16d33e6e2ec74879 389 Gene3D G3DSA:3.20.20.10 101 271 1.2E-6 T 22-04-2016 IPR029066 PLP-binding barrel YE1043 4f65d71ecc75a34c16d33e6e2ec74879 389 SUPERFAMILY SSF51419 34 273 2.62E-20 T 22-04-2016 IPR029066 PLP-binding barrel YE1043 4f65d71ecc75a34c16d33e6e2ec74879 389 Pfam PF01168 Alanine racemase, N-terminal domain 33 269 9.1E-20 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YE1165 01acb38bc08d50f35642d38bda939e5e 228 ProSitePatterns PS00622 LuxR-type HTH domain signature. 181 208 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE1165 01acb38bc08d50f35642d38bda939e5e 228 SUPERFAMILY SSF46894 158 222 9.18E-16 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YE1165 01acb38bc08d50f35642d38bda939e5e 228 Pfam PF00196 Bacterial regulatory proteins, luxR family 168 219 1.3E-16 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE1165 01acb38bc08d50f35642d38bda939e5e 228 SMART SM00421 164 221 7.1E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE1165 01acb38bc08d50f35642d38bda939e5e 228 Gene3D G3DSA:1.10.10.10 167 222 8.6E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1165 01acb38bc08d50f35642d38bda939e5e 228 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 197 209 2.7E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE1165 01acb38bc08d50f35642d38bda939e5e 228 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 181 2.7E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE1165 01acb38bc08d50f35642d38bda939e5e 228 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 197 2.7E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE3736 2de8e2ead058946db60e1d7a38aa2a96 472 Gene3D G3DSA:3.50.50.60 236 400 1.8E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE3736 2de8e2ead058946db60e1d7a38aa2a96 472 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 1.5E-37 T 22-04-2016 YE3736 2de8e2ead058946db60e1d7a38aa2a96 472 PRINTS PR00419 Adrenodoxin reductase family signature 290 304 1.5E-37 T 22-04-2016 YE3736 2de8e2ead058946db60e1d7a38aa2a96 472 PRINTS PR00419 Adrenodoxin reductase family signature 324 337 1.5E-37 T 22-04-2016 YE3736 2de8e2ead058946db60e1d7a38aa2a96 472 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 1.5E-37 T 22-04-2016 YE3736 2de8e2ead058946db60e1d7a38aa2a96 472 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 1.5E-37 T 22-04-2016 YE3736 2de8e2ead058946db60e1d7a38aa2a96 472 SUPERFAMILY SSF46548 7 157 8.37E-42 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 YE3736 2de8e2ead058946db60e1d7a38aa2a96 472 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 134 2.9E-38 T 22-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II YE3736 2de8e2ead058946db60e1d7a38aa2a96 472 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 472 2.1E-261 T 22-04-2016 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 YE3736 2de8e2ead058946db60e1d7a38aa2a96 472 Gene3D G3DSA:3.40.50.720 150 235 8.3E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3736 2de8e2ead058946db60e1d7a38aa2a96 472 Gene3D G3DSA:3.40.50.720 401 471 8.3E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3736 2de8e2ead058946db60e1d7a38aa2a96 472 PANTHER PTHR11938:SF93 23 472 0.0 T 22-04-2016 YE3736 2de8e2ead058946db60e1d7a38aa2a96 472 Gene3D G3DSA:1.10.1060.10 5 149 6.7E-48 T 22-04-2016 YE3736 2de8e2ead058946db60e1d7a38aa2a96 472 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 459 2.0E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE3736 2de8e2ead058946db60e1d7a38aa2a96 472 PANTHER PTHR11938 23 472 0.0 T 22-04-2016 YE3736 2de8e2ead058946db60e1d7a38aa2a96 472 SUPERFAMILY SSF51971 145 401 6.47E-69 T 22-04-2016 YE0217 ec134c6b7237952e57ad669b132b654b 84 PANTHER PTHR33279 8 80 1.4E-48 T 22-04-2016 YE0217 ec134c6b7237952e57ad669b132b654b 84 Hamap MF_00413 Sulfurtransferase TusA [tusA]. 3 81 29.479 T 22-04-2016 IPR022931 Sulphurtransferase TusA GO:0016783 YE0217 ec134c6b7237952e57ad669b132b654b 84 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 22-04-2016 IPR001455 TusA-like domain YE0217 ec134c6b7237952e57ad669b132b654b 84 SUPERFAMILY SSF64307 4 80 1.27E-26 T 22-04-2016 IPR001455 TusA-like domain YE0217 ec134c6b7237952e57ad669b132b654b 84 Pfam PF01206 Sulfurtransferase TusA 10 79 1.5E-25 T 22-04-2016 IPR001455 TusA-like domain YE0217 ec134c6b7237952e57ad669b132b654b 84 Gene3D G3DSA:3.30.110.40 5 80 6.0E-31 T 22-04-2016 IPR001455 TusA-like domain YE0217 ec134c6b7237952e57ad669b132b654b 84 PANTHER PTHR33279:SF5 8 80 1.4E-48 T 22-04-2016 YE2984 deeb23e68186f56aa975e3b6fb94323a 393 PANTHER PTHR13789:SF233 1 393 8.7E-254 T 22-04-2016 YE2984 deeb23e68186f56aa975e3b6fb94323a 393 PANTHER PTHR13789 1 393 8.7E-254 T 22-04-2016 YE2984 deeb23e68186f56aa975e3b6fb94323a 393 Gene3D G3DSA:3.50.50.60 7 185 8.8E-46 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE2984 deeb23e68186f56aa975e3b6fb94323a 393 Gene3D G3DSA:3.50.50.60 270 358 8.8E-46 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE2984 deeb23e68186f56aa975e3b6fb94323a 393 SUPERFAMILY SSF51905 7 180 3.99E-60 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE2984 deeb23e68186f56aa975e3b6fb94323a 393 SUPERFAMILY SSF51905 269 384 3.99E-60 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE2984 deeb23e68186f56aa975e3b6fb94323a 393 Pfam PF01494 FAD binding domain 8 341 2.5E-25 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 YE2984 deeb23e68186f56aa975e3b6fb94323a 393 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 9 392 5.2E-127 T 22-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 YE2984 deeb23e68186f56aa975e3b6fb94323a 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 7.4E-18 T 22-04-2016 YE2984 deeb23e68186f56aa975e3b6fb94323a 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 313 7.4E-18 T 22-04-2016 YE2984 deeb23e68186f56aa975e3b6fb94323a 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 159 174 7.4E-18 T 22-04-2016 YE2984 deeb23e68186f56aa975e3b6fb94323a 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 282 297 7.4E-18 T 22-04-2016 YE3343 fb8db02860e9801e091778b00cf89090 398 SUPERFAMILY SSF53067 11 151 1.29E-26 T 22-04-2016 YE3343 fb8db02860e9801e091778b00cf89090 398 Pfam PF05134 Type II secretion system (T2SS), protein L 14 236 2.2E-39 T 22-04-2016 IPR024230 GspL, cytoplasmic actin-ATPase-like domain YE3343 fb8db02860e9801e091778b00cf89090 398 SUPERFAMILY SSF53067 153 236 3.24E-14 T 22-04-2016 YE3747 2f484d408dc3df7b8337ec7382689e94 87 PIRSF PIRSF003113 1 86 1.2E-21 T 22-04-2016 IPR002634 BolA protein YE3747 2f484d408dc3df7b8337ec7382689e94 87 PANTHER PTHR12735 1 87 3.9E-33 T 22-04-2016 YE3747 2f484d408dc3df7b8337ec7382689e94 87 Gene3D G3DSA:3.30.300.90 3 83 1.1E-27 T 22-04-2016 IPR002634 BolA protein YE3747 2f484d408dc3df7b8337ec7382689e94 87 Pfam PF01722 BolA-like protein 21 77 1.3E-14 T 22-04-2016 IPR002634 BolA protein YE3747 2f484d408dc3df7b8337ec7382689e94 87 PANTHER PTHR12735:SF24 1 87 3.9E-33 T 22-04-2016 YE3747 2f484d408dc3df7b8337ec7382689e94 87 SUPERFAMILY SSF82657 4 85 3.27E-29 T 22-04-2016 IPR002634 BolA protein YE1590 8e81b1ce24d9d37fa1f37c5ea0104a61 171 SUPERFAMILY SSF46689 1 54 9.14E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE1590 8e81b1ce24d9d37fa1f37c5ea0104a61 171 PANTHER PTHR33795:SF1 1 171 9.2E-34 T 22-04-2016 YE1590 8e81b1ce24d9d37fa1f37c5ea0104a61 171 Gene3D G3DSA:1.10.10.60 7 54 8.0E-4 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE1590 8e81b1ce24d9d37fa1f37c5ea0104a61 171 Gene3D G3DSA:1.10.10.60 68 160 3.1E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE1590 8e81b1ce24d9d37fa1f37c5ea0104a61 171 SUPERFAMILY SSF46689 57 164 7.35E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE1590 8e81b1ce24d9d37fa1f37c5ea0104a61 171 Pfam PF13518 Helix-turn-helix domain 66 118 2.6E-11 T 22-04-2016 YE1590 8e81b1ce24d9d37fa1f37c5ea0104a61 171 PANTHER PTHR33795 1 171 9.2E-34 T 22-04-2016 YE3994 9d7ccfb546a837ca0c9147d6111aea57 227 Gene3D G3DSA:3.40.50.2020 50 226 2.5E-25 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YE3994 9d7ccfb546a837ca0c9147d6111aea57 227 PANTHER PTHR11907:SF9 1 227 1.4E-73 T 22-04-2016 YE3994 9d7ccfb546a837ca0c9147d6111aea57 227 SUPERFAMILY SSF53271 43 225 1.1E-35 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like YE3994 9d7ccfb546a837ca0c9147d6111aea57 227 PANTHER PTHR11907 1 227 1.4E-73 T 22-04-2016 YE1292 f3c48d9766ac61c416f4104930118702 460 Pfam PF00232 Glycosyl hydrolase family 1 2 458 2.0E-130 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YE1292 f3c48d9766ac61c416f4104930118702 460 PANTHER PTHR10353:SF73 1 460 0.0 T 22-04-2016 YE1292 f3c48d9766ac61c416f4104930118702 460 PANTHER PTHR10353 1 460 0.0 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YE1292 f3c48d9766ac61c416f4104930118702 460 SUPERFAMILY SSF51445 1 460 2.71E-157 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily YE1292 f3c48d9766ac61c416f4104930118702 460 Gene3D G3DSA:3.20.20.80 3 459 9.3E-143 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 YE1292 f3c48d9766ac61c416f4104930118702 460 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 360 368 - T 22-04-2016 IPR018120 Glycoside hydrolase family 1, active site YE1292 f3c48d9766ac61c416f4104930118702 460 PRINTS PR00131 Glycosyl hydrolase family 1 signature 360 368 4.7E-14 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YE1292 f3c48d9766ac61c416f4104930118702 460 PRINTS PR00131 Glycosyl hydrolase family 1 signature 383 394 4.7E-14 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YE1292 f3c48d9766ac61c416f4104930118702 460 PRINTS PR00131 Glycosyl hydrolase family 1 signature 288 302 4.7E-14 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YE1292 f3c48d9766ac61c416f4104930118702 460 PRINTS PR00131 Glycosyl hydrolase family 1 signature 404 421 4.7E-14 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YE1292 f3c48d9766ac61c416f4104930118702 460 PRINTS PR00131 Glycosyl hydrolase family 1 signature 428 440 4.7E-14 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 YE1377 a7548f9f921690ee0076166b53184401 285 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 15 284 55.646 T 22-04-2016 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 YE1377 a7548f9f921690ee0076166b53184401 285 Gene3D G3DSA:1.10.12.10 223 273 3.9E-31 T 22-04-2016 IPR014748 Crontonase, C-terminal YE1377 a7548f9f921690ee0076166b53184401 285 Gene3D G3DSA:3.90.226.10 22 222 1.4E-69 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YE1377 a7548f9f921690ee0076166b53184401 285 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 123 143 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 YE1377 a7548f9f921690ee0076166b53184401 285 PANTHER PTHR11941 9 278 1.7E-197 T 22-04-2016 YE1377 a7548f9f921690ee0076166b53184401 285 TIGRFAM TIGR01929 menB: naphthoate synthase 22 281 5.0E-150 T 22-04-2016 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 YE1377 a7548f9f921690ee0076166b53184401 285 Pfam PF00378 Enoyl-CoA hydratase/isomerase 31 279 3.1E-79 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 YE1377 a7548f9f921690ee0076166b53184401 285 SUPERFAMILY SSF52096 18 280 1.85E-78 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YE1377 a7548f9f921690ee0076166b53184401 285 PANTHER PTHR11941:SF20 9 278 1.7E-197 T 22-04-2016 YE1479 07b631dd18d6847672ffee000e4566c7 87 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 2 86 4.9E-51 T 22-04-2016 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 YE1479 07b631dd18d6847672ffee000e4566c7 87 Pfam PF00462 Glutaredoxin 4 69 3.1E-17 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 YE1479 07b631dd18d6847672ffee000e4566c7 87 SUPERFAMILY SSF52833 4 82 4.01E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold YE1479 07b631dd18d6847672ffee000e4566c7 87 PANTHER PTHR10168 4 82 1.7E-46 T 22-04-2016 YE1479 07b631dd18d6847672ffee000e4566c7 87 PANTHER PTHR10168:SF85 4 82 1.7E-46 T 22-04-2016 YE1479 07b631dd18d6847672ffee000e4566c7 87 Gene3D G3DSA:3.40.30.10 4 82 3.5E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold YE1479 07b631dd18d6847672ffee000e4566c7 87 PRINTS PR00160 Glutaredoxin signature 3 21 3.4E-12 T 22-04-2016 IPR014025 Glutaredoxin subgroup YE1479 07b631dd18d6847672ffee000e4566c7 87 PRINTS PR00160 Glutaredoxin signature 66 79 3.4E-12 T 22-04-2016 IPR014025 Glutaredoxin subgroup YE1479 07b631dd18d6847672ffee000e4566c7 87 PRINTS PR00160 Glutaredoxin signature 52 65 3.4E-12 T 22-04-2016 IPR014025 Glutaredoxin subgroup YE1479 07b631dd18d6847672ffee000e4566c7 87 ProSitePatterns PS00195 Glutaredoxin active site. 5 20 - T 22-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 YE1611 4a0fabfb7f637e780218172a28639637 144 Pfam PF07681 DoxX 20 98 4.2E-17 T 22-04-2016 IPR032808 DoxX family YE1611 4a0fabfb7f637e780218172a28639637 144 PANTHER PTHR33452 1 137 1.5E-18 T 22-04-2016 YE1759 3cb80296b74c51d6e91534ad3c9139bf 99 Pfam PF10765 Protein of unknown function (DUF2591) 29 97 1.8E-13 T 22-04-2016 IPR019701 Bacteriophage P22, NinX YE2216A a81db0bf0560d401710bc92faed00ec6 147 Pfam PF03692 Putative zinc- or iron-chelating domain 19 110 1.5E-9 T 22-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein YE1392 48fe5a5292d4c3084af95c1acd3d89ae 376 Pfam PF00268 Ribonucleotide reductase, small chain 33 332 3.2E-46 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 YE1392 48fe5a5292d4c3084af95c1acd3d89ae 376 PANTHER PTHR23409 197 376 4.7E-270 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 YE1392 48fe5a5292d4c3084af95c1acd3d89ae 376 PANTHER PTHR23409 1 173 4.7E-270 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 YE1392 48fe5a5292d4c3084af95c1acd3d89ae 376 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 22-04-2016 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 YE1392 48fe5a5292d4c3084af95c1acd3d89ae 376 Gene3D G3DSA:1.10.620.20 3 340 5.5E-124 T 22-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 YE1392 48fe5a5292d4c3084af95c1acd3d89ae 376 SUPERFAMILY SSF47240 3 340 3.75E-113 T 22-04-2016 IPR009078 Ferritin-like superfamily YE1392 48fe5a5292d4c3084af95c1acd3d89ae 376 PANTHER PTHR23409:SF23 197 376 4.7E-270 T 22-04-2016 YE1392 48fe5a5292d4c3084af95c1acd3d89ae 376 PANTHER PTHR23409:SF23 1 173 4.7E-270 T 22-04-2016 YE3262 323d2ebdc6ba7e1f9b477389a8cdfc3d 66 Hamap MF_01064 UPF0253 protein YaeP [yaeP]. 1 66 25.618 T 22-04-2016 IPR009624 Uncharacterised protein family UPF0253 YE3262 323d2ebdc6ba7e1f9b477389a8cdfc3d 66 ProDom PD054643 UPF0253 YAEP CYTOPLASMIC VP2335 YPO1064.1/Y3113/YP2785 VC0872 VV2574 PBPRA2947 VV11836 1 66 6.0E-27 T 22-04-2016 IPR009624 Uncharacterised protein family UPF0253 YE3262 323d2ebdc6ba7e1f9b477389a8cdfc3d 66 Pfam PF06786 Uncharacterised protein family (UPF0253) 2 65 1.6E-35 T 22-04-2016 IPR009624 Uncharacterised protein family UPF0253 YE3621 131b18736c773362d58e3336ecae9792 282 PANTHER PTHR24220:SF438 25 279 9.1E-153 T 22-04-2016 YE3621 131b18736c773362d58e3336ecae9792 282 Gene3D G3DSA:3.40.50.300 24 254 5.1E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3621 131b18736c773362d58e3336ecae9792 282 SMART SM00382 48 237 7.1E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain YE3621 131b18736c773362d58e3336ecae9792 282 PANTHER PTHR24220 25 279 9.1E-153 T 22-04-2016 YE3621 131b18736c773362d58e3336ecae9792 282 Pfam PF00005 ABC transporter 40 187 2.8E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE3621 131b18736c773362d58e3336ecae9792 282 SUPERFAMILY SSF52540 23 249 1.36E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE3621 131b18736c773362d58e3336ecae9792 282 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE1184 6d1e884795a4ec4257f87198d5c7f1ae 60 Gene3D G3DSA:3.40.630.30 1 48 4.9E-9 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE1184 6d1e884795a4ec4257f87198d5c7f1ae 60 SUPERFAMILY SSF55729 1 50 3.3E-9 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE1184 6d1e884795a4ec4257f87198d5c7f1ae 60 Pfam PF00583 Acetyltransferase (GNAT) family 1 43 1.4E-5 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YE4076 9eafc8f2b66607c8ce68a76fee87edb5 63 ProDom PD053230 YHJR ECS4415 STY4179 CYTOPLASMIC 17 58 1.0E-8 T 22-04-2016 IPR024487 Cellulose biosynthesis protein BcsR YE4076 9eafc8f2b66607c8ce68a76fee87edb5 63 Pfam PF10945 Cellulose biosynthesis protein BcsR 17 57 2.5E-23 T 22-04-2016 IPR024487 Cellulose biosynthesis protein BcsR YE3948 f88909d4d97db984645169b80643d6e9 318 SMART SM00062 14 229 3.1E-21 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YE3948 f88909d4d97db984645169b80643d6e9 318 Gene3D G3DSA:3.40.190.10 97 216 7.9E-22 T 22-04-2016 YE3948 f88909d4d97db984645169b80643d6e9 318 Gene3D G3DSA:3.40.190.10 28 89 5.0E-5 T 22-04-2016 YE3948 f88909d4d97db984645169b80643d6e9 318 SUPERFAMILY SSF53850 24 296 3.14E-46 T 22-04-2016 YE3948 f88909d4d97db984645169b80643d6e9 318 PANTHER PTHR30024 1 316 1.7E-133 T 22-04-2016 YE3948 f88909d4d97db984645169b80643d6e9 318 TIGRFAM TIGR01729 taurine_ABC_bnd: taurine ABC transporter, periplasmic binding protein 15 310 6.5E-137 T 22-04-2016 IPR010068 Periplasmic binding protein TauA GO:0015734|GO:0042597 YE3948 f88909d4d97db984645169b80643d6e9 318 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 14 236 1.7E-22 T 22-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 YE3948 f88909d4d97db984645169b80643d6e9 318 PANTHER PTHR30024:SF17 1 316 1.7E-133 T 22-04-2016 YE3614 3e44f2e3c2aa8cdfae2398be1b05a21b 282 PANTHER PTHR22835:SF222 61 274 4.1E-23 T 22-04-2016 YE3614 3e44f2e3c2aa8cdfae2398be1b05a21b 282 SUPERFAMILY SSF52266 63 265 8.7E-17 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain YE3614 3e44f2e3c2aa8cdfae2398be1b05a21b 282 PANTHER PTHR22835 61 274 4.1E-23 T 22-04-2016 YE3614 3e44f2e3c2aa8cdfae2398be1b05a21b 282 Gene3D G3DSA:3.40.50.1110 59 275 4.4E-37 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain YE3614 3e44f2e3c2aa8cdfae2398be1b05a21b 282 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 65 262 1.8E-12 T 22-04-2016 IPR001087 GDSL lipase/esterase GO:0016788 YE1451 97a340fd3ec474d8dc634c59045b1c0b 163 ProDom PD022058 PSAF MYFF 1 162 1.0E-69 T 22-04-2016 YE2955A e800e1b4f65b04fd239e5c23113f132b 218 SMART SM00796 4 202 5.2E-93 T 22-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D YE2955A e800e1b4f65b04fd239e5c23113f132b 218 SUPERFAMILY SSF50891 88 213 4.17E-44 T 22-04-2016 IPR029000 Cyclophilin-like domain YE2955A e800e1b4f65b04fd239e5c23113f132b 218 Gene3D G3DSA:2.40.100.10 88 212 1.6E-50 T 22-04-2016 IPR029000 Cyclophilin-like domain YE2955A e800e1b4f65b04fd239e5c23113f132b 218 PANTHER PTHR34698 2 215 7.3E-88 T 22-04-2016 YE2955A e800e1b4f65b04fd239e5c23113f132b 218 Pfam PF02682 Allophanate hydrolase subunit 1 6 202 1.1E-67 T 22-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D YE2955A e800e1b4f65b04fd239e5c23113f132b 218 Gene3D G3DSA:3.30.1360.40 5 79 1.2E-6 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain YE2955A e800e1b4f65b04fd239e5c23113f132b 218 SUPERFAMILY SSF160467 5 92 2.88E-8 T 22-04-2016 YE2955A e800e1b4f65b04fd239e5c23113f132b 218 PANTHER PTHR34698:SF2 2 215 7.3E-88 T 22-04-2016 YE2955A e800e1b4f65b04fd239e5c23113f132b 218 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 9 211 2.3E-92 T 22-04-2016 IPR010016 KipI family YE2262 838c9c4dadf35a36f4be823d1b622676 217 Pfam PF00857 Isochorismatase family 4 205 2.8E-34 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 YE2262 838c9c4dadf35a36f4be823d1b622676 217 PANTHER PTHR11080 1 217 1.1E-63 T 22-04-2016 YE2262 838c9c4dadf35a36f4be823d1b622676 217 PANTHER PTHR11080:SF2 1 217 1.1E-63 T 22-04-2016 YE2262 838c9c4dadf35a36f4be823d1b622676 217 Gene3D G3DSA:3.40.50.850 1 210 1.2E-62 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 YE2262 838c9c4dadf35a36f4be823d1b622676 217 SUPERFAMILY SSF52499 2 211 8.11E-52 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 YE3268 19e928e90fc0821e1b91e139b80cab57 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 151 7.4E-64 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 YE3268 19e928e90fc0821e1b91e139b80cab57 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 3.2E-50 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 YE3268 19e928e90fc0821e1b91e139b80cab57 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 134 3.2E-50 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 YE3268 19e928e90fc0821e1b91e139b80cab57 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 91 102 3.2E-50 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 YE3268 19e928e90fc0821e1b91e139b80cab57 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 172 185 3.2E-50 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 YE3268 19e928e90fc0821e1b91e139b80cab57 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 200 209 3.2E-50 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 YE3268 19e928e90fc0821e1b91e139b80cab57 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 137 153 3.2E-50 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 YE3268 19e928e90fc0821e1b91e139b80cab57 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 5.6E-172 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 YE3268 19e928e90fc0821e1b91e139b80cab57 319 PANTHER PTHR22855 1 317 5.4E-143 T 22-04-2016 YE3268 19e928e90fc0821e1b91e139b80cab57 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 319 51.039 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 YE3268 19e928e90fc0821e1b91e139b80cab57 319 SUPERFAMILY SSF52096 5 318 1.79E-105 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YE3268 19e928e90fc0821e1b91e139b80cab57 319 Gene3D G3DSA:3.90.226.10 58 281 1.1E-50 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YE1110 ff76dfef9c7023545fc68dce6b8d58c2 88 PIRSF PIRSF006156 1 88 4.8E-20 T 22-04-2016 IPR004386 Toxin-antitoxin system, YafQ-like toxin YE1110 ff76dfef9c7023545fc68dce6b8d58c2 88 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 3 88 1.2E-14 T 22-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family YE1110 ff76dfef9c7023545fc68dce6b8d58c2 88 PANTHER PTHR40588 1 88 1.2E-17 T 22-04-2016 YE1110 ff76dfef9c7023545fc68dce6b8d58c2 88 Pfam PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ 3 88 4.5E-24 T 22-04-2016 IPR004386 Toxin-antitoxin system, YafQ-like toxin YE1110 ff76dfef9c7023545fc68dce6b8d58c2 88 SUPERFAMILY SSF143011 1 88 1.7E-20 T 22-04-2016 YE2691 e9fdf9f67bc14c9885e0bf5461dba399 174 PANTHER PTHR35850:SF1 2 171 4.2E-107 T 22-04-2016 YE2691 e9fdf9f67bc14c9885e0bf5461dba399 174 PANTHER PTHR35850 2 171 4.2E-107 T 22-04-2016 YE2691 e9fdf9f67bc14c9885e0bf5461dba399 174 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 12 162 8.5E-58 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 YE2691 e9fdf9f67bc14c9885e0bf5461dba399 174 PIRSF PIRSF028301 2 174 2.3E-61 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 YE2691 e9fdf9f67bc14c9885e0bf5461dba399 174 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 8 165 2.7E-59 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 YE1051 1e2ee95be16020ff33064de86af09830 224 PIRSF PIRSF008159 7 224 1.7E-73 T 22-04-2016 IPR016537 Uncharacterised conserved protein UCP008159, YE1051 1e2ee95be16020ff33064de86af09830 224 Pfam PF06226 Protein of unknown function (DUF1007) 25 223 6.4E-64 T 22-04-2016 IPR010412 Protein of unknown function DUF1007 YE2148 3b2445f7c2aaa9e014f4127986cb6983 298 PANTHER PTHR11732 2 298 6.0E-162 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta YE2148 3b2445f7c2aaa9e014f4127986cb6983 298 PRINTS PR00069 Aldo-keto reductase signature 112 130 2.155813E-7 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YE2148 3b2445f7c2aaa9e014f4127986cb6983 298 PRINTS PR00069 Aldo-keto reductase signature 143 160 2.155813E-7 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 YE2148 3b2445f7c2aaa9e014f4127986cb6983 298 PANTHER PTHR11732:SF10 2 298 6.0E-162 T 22-04-2016 YE2148 3b2445f7c2aaa9e014f4127986cb6983 298 SUPERFAMILY SSF51430 10 295 3.4E-73 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YE2148 3b2445f7c2aaa9e014f4127986cb6983 298 Pfam PF00248 Aldo/keto reductase family 17 291 4.0E-64 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YE2148 3b2445f7c2aaa9e014f4127986cb6983 298 Gene3D G3DSA:3.20.20.100 10 292 9.3E-68 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YE4104 2112cef5a00f9364c3622779f084f184 441 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 16 426 2.8E-112 T 22-04-2016 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 YE4104 2112cef5a00f9364c3622779f084f184 441 PANTHER PTHR33989 3 441 2.8E-145 T 22-04-2016 YE4104 2112cef5a00f9364c3622779f084f184 441 Pfam PF02378 Phosphotransferase system, EIIC 33 352 2.3E-53 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 YE4104 2112cef5a00f9364c3622779f084f184 441 PIRSF PIRSF006351 5 436 7.8E-139 T 22-04-2016 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 YE2099 2001758eed36b7071f2788b7d2730049 105 PANTHER PTHR38008:SF1 1 104 3.9E-32 T 22-04-2016 YE2099 2001758eed36b7071f2788b7d2730049 105 PANTHER PTHR38008 1 104 3.9E-32 T 22-04-2016 YE2099 2001758eed36b7071f2788b7d2730049 105 Pfam PF03891 Domain of unknown function (DUF333) 54 101 2.6E-26 T 22-04-2016 IPR005590 Protein of unknown function DUF333 YE0362 57acf941b202e7b117b2a7abd35a85e9 130 Hamap MF_00708 Fumarate reductase subunit C [frdC]. 2 128 28.312 T 22-04-2016 IPR003510 Fumarate reductase, subunit C GO:0016020 YE0362 57acf941b202e7b117b2a7abd35a85e9 130 PIRSF PIRSF000180 2 130 3.8E-57 T 22-04-2016 IPR003510 Fumarate reductase, subunit C GO:0016020 YE0362 57acf941b202e7b117b2a7abd35a85e9 130 SUPERFAMILY SSF81343 2 129 1.42E-56 T 22-04-2016 YE0362 57acf941b202e7b117b2a7abd35a85e9 130 Gene3D G3DSA:1.20.1300.10 3 129 2.2E-55 T 22-04-2016 YE0362 57acf941b202e7b117b2a7abd35a85e9 130 Pfam PF02300 Fumarate reductase subunit C 3 128 3.2E-54 T 22-04-2016 IPR003510 Fumarate reductase, subunit C GO:0016020 YE0362 57acf941b202e7b117b2a7abd35a85e9 130 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 7 114 3.0E-53 T 22-04-2016 IPR003510 Fumarate reductase, subunit C GO:0016020 YE1250 4e92e480df5ea39e82f9efc7b13ed480 211 SUPERFAMILY SSF159594 39 208 1.62E-44 T 22-04-2016 YE1250 4e92e480df5ea39e82f9efc7b13ed480 211 PANTHER PTHR36698 4 211 5.3E-38 T 22-04-2016 YE1250 4e92e480df5ea39e82f9efc7b13ed480 211 Gene3D G3DSA:3.40.50.10610 29 210 8.1E-60 T 22-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component YE1250 4e92e480df5ea39e82f9efc7b13ed480 211 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 41 201 5.0E-23 T 22-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component YE1250 4e92e480df5ea39e82f9efc7b13ed480 211 PANTHER PTHR36698:SF1 4 211 5.3E-38 T 22-04-2016 YE3699 302ac0beeb225a01b0f74a4cf2c2b7b8 396 PANTHER PTHR18895:SF6 80 395 1.5E-176 T 22-04-2016 YE3699 302ac0beeb225a01b0f74a4cf2c2b7b8 396 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 1 375 49.82 T 22-04-2016 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YE3699 302ac0beeb225a01b0f74a4cf2c2b7b8 396 SUPERFAMILY SSF53335 191 373 6.37E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE3699 302ac0beeb225a01b0f74a4cf2c2b7b8 396 PANTHER PTHR18895 80 395 1.5E-176 T 22-04-2016 YE3699 302ac0beeb225a01b0f74a4cf2c2b7b8 396 Pfam PF05175 Methyltransferase small domain 201 372 1.8E-52 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 YE3699 302ac0beeb225a01b0f74a4cf2c2b7b8 396 PIRSF PIRSF037565 1 376 5.9E-164 T 22-04-2016 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 YE3699 302ac0beeb225a01b0f74a4cf2c2b7b8 396 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 304 310 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 YE3699 302ac0beeb225a01b0f74a4cf2c2b7b8 396 Gene3D G3DSA:3.40.50.150 200 375 2.5E-19 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE2620 4835ead59df3bd4c892ac0a1b5a985ae 267 Pfam PF00975 Thioesterase domain 20 249 4.8E-65 T 22-04-2016 IPR001031 Thioesterase GO:0009058|GO:0016788 YE2620 4835ead59df3bd4c892ac0a1b5a985ae 267 PANTHER PTHR11487 2 258 3.8E-118 T 22-04-2016 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS GO:0009058 YE2620 4835ead59df3bd4c892ac0a1b5a985ae 267 PANTHER PTHR11487:SF3 2 258 3.8E-118 T 22-04-2016 YE2620 4835ead59df3bd4c892ac0a1b5a985ae 267 SMART SM00824 Thioesterase 23 248 0.0029 T 22-04-2016 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 YE2620 4835ead59df3bd4c892ac0a1b5a985ae 267 Gene3D G3DSA:3.40.50.1820 8 126 3.4E-31 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE2620 4835ead59df3bd4c892ac0a1b5a985ae 267 Gene3D G3DSA:3.40.50.1820 180 240 3.4E-31 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE2620 4835ead59df3bd4c892ac0a1b5a985ae 267 SUPERFAMILY SSF53474 9 246 1.58E-45 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE0143 03f07e346a83e21fe5e172a97d6a43c5 339 PANTHER PTHR32196:SF19 1 339 6.8E-227 T 22-04-2016 YE0143 03f07e346a83e21fe5e172a97d6a43c5 339 PANTHER PTHR32196 1 339 6.8E-227 T 22-04-2016 YE0143 03f07e346a83e21fe5e172a97d6a43c5 339 Pfam PF02653 Branched-chain amino acid transport system / permease component 58 322 2.3E-43 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YE0974 1bb80c6eb18d76ecbdf8f2b5820c7611 55 PANTHER PTHR30629 2 50 1.4E-12 T 22-04-2016 YE0974 1bb80c6eb18d76ecbdf8f2b5820c7611 55 PANTHER PTHR30629:SF2 2 50 1.4E-12 T 22-04-2016 YE1971 01157ebaa38572f53bdd545ab8df4b12 400 TIGRFAM TIGR00843 benE: benzoate transporter 7 386 3.7E-142 T 22-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 YE1971 01157ebaa38572f53bdd545ab8df4b12 400 Pfam PF03594 Benzoate membrane transport protein 9 384 7.7E-140 T 22-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 YE1971 01157ebaa38572f53bdd545ab8df4b12 400 PANTHER PTHR30199 4 396 9.8E-155 T 22-04-2016 YE1971 01157ebaa38572f53bdd545ab8df4b12 400 PANTHER PTHR30199:SF0 4 396 9.8E-155 T 22-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 YE1094 7d2f90d9283b8e3c83558a3625facbf4 121 PIRSF PIRSF011474 2 121 3.3E-37 T 22-04-2016 IPR009693 Glucitol operon activator YE1094 7d2f90d9283b8e3c83558a3625facbf4 121 Pfam PF06923 Glucitol operon activator protein (GutM) 7 113 9.6E-36 T 22-04-2016 IPR009693 Glucitol operon activator YE3505 024dd0ae7b2bc9d3c203d4154ab6c029 145 Pfam PF07419 PilM 12 144 4.8E-23 T 22-04-2016 IPR009987 PilM, inner membrane YE1135 f0d0158d02594d7fa12a06a21a334908 156 Gene3D G3DSA:3.40.30.10 3 154 1.5E-49 T 22-04-2016 IPR012336 Thioredoxin-like fold YE1135 f0d0158d02594d7fa12a06a21a334908 156 Pfam PF00578 AhpC/TSA family 7 134 4.4E-39 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 YE1135 f0d0158d02594d7fa12a06a21a334908 156 PIRSF PIRSF000239 1 149 4.2E-17 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 YE1135 f0d0158d02594d7fa12a06a21a334908 156 SUPERFAMILY SSF52833 3 153 3.16E-49 T 22-04-2016 IPR012336 Thioredoxin-like fold YE1135 f0d0158d02594d7fa12a06a21a334908 156 PANTHER PTHR10681 1 152 1.4E-51 T 22-04-2016 YE1370A 1283722614d7a137e669fee0d911d124 193 Pfam PF12318 Membrane bound FAD containing D-sorbitol dehydrogenase 20 179 5.1E-53 T 22-04-2016 IPR024651 FAD-containing D-sorbitol dehydrogenase small subunit YE3760 af8eb0e79084f47fc116b0531bc285ce 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 93 3.6E-29 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 YE3760 af8eb0e79084f47fc116b0531bc285ce 95 Gene3D G3DSA:3.30.160.100 1 95 1.7E-39 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 YE3760 af8eb0e79084f47fc116b0531bc285ce 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 6.4E-36 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 YE3760 af8eb0e79084f47fc116b0531bc285ce 95 PANTHER PTHR33231 1 95 3.8E-41 T 22-04-2016 YE3760 af8eb0e79084f47fc116b0531bc285ce 95 SUPERFAMILY SSF69754 1 95 4.32E-36 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 YE3223 23659f41b6146fda8319e698fc0cf3fb 193 SUPERFAMILY SSF53697 1 189 2.02E-52 T 22-04-2016 YE3223 23659f41b6146fda8319e698fc0cf3fb 193 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 35 187 3.7E-84 T 22-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 YE3223 23659f41b6146fda8319e698fc0cf3fb 193 PANTHER PTHR30390 2 192 6.2E-96 T 22-04-2016 YE3223 23659f41b6146fda8319e698fc0cf3fb 193 Gene3D G3DSA:3.40.50.10490 1 190 4.2E-63 T 22-04-2016 YE3223 23659f41b6146fda8319e698fc0cf3fb 193 PANTHER PTHR30390:SF6 2 192 6.2E-96 T 22-04-2016 YE3223 23659f41b6146fda8319e698fc0cf3fb 193 Pfam PF13580 SIS domain 25 146 1.2E-31 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 YE3223 23659f41b6146fda8319e698fc0cf3fb 193 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 38.507 T 22-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 YE1749 445790847a4549385972ae07a238f199 139 Pfam PF00583 Acetyltransferase (GNAT) family 54 116 3.4E-11 T 22-04-2016 IPR000182 GNAT domain GO:0008080 YE1749 445790847a4549385972ae07a238f199 139 Gene3D G3DSA:3.40.630.30 40 137 2.1E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE1749 445790847a4549385972ae07a238f199 139 SUPERFAMILY SSF55729 34 137 1.62E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE0911 4eadcf2a03420319a1ecaf2fde58173a 415 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 162 178 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site YE0911 4eadcf2a03420319a1ecaf2fde58173a 415 SMART SM00825 Beta-ketoacyl synthase 11 414 3.0E-11 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YE0911 4eadcf2a03420319a1ecaf2fde58173a 415 Gene3D G3DSA:3.40.47.10 7 266 3.0E-57 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YE0911 4eadcf2a03420319a1ecaf2fde58173a 415 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 9 253 2.1E-42 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal YE0911 4eadcf2a03420319a1ecaf2fde58173a 415 SUPERFAMILY SSF53901 9 260 2.05E-55 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YE0911 4eadcf2a03420319a1ecaf2fde58173a 415 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 261 370 5.8E-28 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal YE0911 4eadcf2a03420319a1ecaf2fde58173a 415 PANTHER PTHR11712 10 415 6.7E-105 T 22-04-2016 YE0911 4eadcf2a03420319a1ecaf2fde58173a 415 SUPERFAMILY SSF53901 221 414 4.92E-58 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YE0911 4eadcf2a03420319a1ecaf2fde58173a 415 Gene3D G3DSA:3.40.47.10 270 415 3.2E-46 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YE2502 99a44a17c1c66a6dcb830150fac5e7f3 207 PANTHER PTHR22789:SF6 1 206 2.1E-114 T 22-04-2016 YE2502 99a44a17c1c66a6dcb830150fac5e7f3 207 SUPERFAMILY SSF53639 1 206 4.71E-62 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal YE2502 99a44a17c1c66a6dcb830150fac5e7f3 207 Gene3D G3DSA:3.40.225.10 1 206 6.5E-66 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal YE2502 99a44a17c1c66a6dcb830150fac5e7f3 207 PANTHER PTHR22789 1 206 2.1E-114 T 22-04-2016 YE2502 99a44a17c1c66a6dcb830150fac5e7f3 207 SMART SM01007 8 187 2.5E-59 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal YE2502 99a44a17c1c66a6dcb830150fac5e7f3 207 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 9 185 3.6E-44 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal YE1074 6f8dfd9acf065c9473372f2066237aca 424 Pfam PF13393 Histidyl-tRNA synthetase 10 312 1.1E-44 T 22-04-2016 YE1074 6f8dfd9acf065c9473372f2066237aca 424 PIRSF PIRSF001549 2 421 3.2E-126 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 YE1074 6f8dfd9acf065c9473372f2066237aca 424 Pfam PF03129 Anticodon binding domain 331 418 4.9E-9 T 22-04-2016 IPR004154 Anticodon-binding YE1074 6f8dfd9acf065c9473372f2066237aca 424 SUPERFAMILY SSF55681 5 318 2.3E-106 T 22-04-2016 YE1074 6f8dfd9acf065c9473372f2066237aca 424 SUPERFAMILY SSF52954 327 419 4.25E-23 T 22-04-2016 IPR004154 Anticodon-binding YE1074 6f8dfd9acf065c9473372f2066237aca 424 PANTHER PTHR11476 2 424 5.3E-238 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 YE1074 6f8dfd9acf065c9473372f2066237aca 424 Gene3D G3DSA:3.40.50.800 326 419 1.3E-29 T 22-04-2016 IPR004154 Anticodon-binding YE1074 6f8dfd9acf065c9473372f2066237aca 424 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 411 2.3E-155 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 YE1074 6f8dfd9acf065c9473372f2066237aca 424 PANTHER PTHR11476:SF9 2 424 5.3E-238 T 22-04-2016 YE1074 6f8dfd9acf065c9473372f2066237aca 424 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 421 33.401 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 YE1074 6f8dfd9acf065c9473372f2066237aca 424 Gene3D G3DSA:3.30.930.10 4 185 9.5E-101 T 22-04-2016 YE1074 6f8dfd9acf065c9473372f2066237aca 424 Gene3D G3DSA:3.30.930.10 221 320 9.5E-101 T 22-04-2016 YE1220 89985c8715ff3c05901a03995f49f80e 142 Pfam PF10697 Protein of unknown function (DUF2502) 44 131 2.1E-33 T 22-04-2016 IPR019638 Protein of unknown function DUF2502 YE3422A 33a710bcef3afd5df4bd67bbfe854ace 143 Pfam PF04143 Sulphur transport 10 131 1.5E-9 T 22-04-2016 IPR007272 Sulphur transport domain YE3422A 33a710bcef3afd5df4bd67bbfe854ace 143 PANTHER PTHR30574 9 141 1.6E-26 T 22-04-2016 YE3422A 33a710bcef3afd5df4bd67bbfe854ace 143 PANTHER PTHR30574:SF1 9 141 1.6E-26 T 22-04-2016 YE1588 c185949b2cab8f1de2039a3611ed8dfc 222 PANTHER PTHR38108 1 222 2.6E-67 T 22-04-2016 YE1588 c185949b2cab8f1de2039a3611ed8dfc 222 Hamap MF_00789 UPF0319 protein YccT [yccT]. 1 218 23.739 T 22-04-2016 IPR018635 Uncharacterised protein family UPF0319 YE1588 c185949b2cab8f1de2039a3611ed8dfc 222 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 18 215 3.3E-46 T 22-04-2016 IPR018635 Uncharacterised protein family UPF0319 YE1588 c185949b2cab8f1de2039a3611ed8dfc 222 PANTHER PTHR38108:SF1 1 222 2.6E-67 T 22-04-2016 YE2380 055edf64d545cf495c6d6cccb22806dc 96 PANTHER PTHR30561 1 96 2.1E-64 T 22-04-2016 YE2380 055edf64d545cf495c6d6cccb22806dc 96 Pfam PF00893 Small Multidrug Resistance protein 1 86 3.9E-26 T 22-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 YE2380 055edf64d545cf495c6d6cccb22806dc 96 SUPERFAMILY SSF103481 1 95 2.48E-17 T 22-04-2016 YE2380 055edf64d545cf495c6d6cccb22806dc 96 PANTHER PTHR30561:SF6 1 96 2.1E-64 T 22-04-2016 IPR023737 Spermidine export protein MdtI GO:0005886|GO:0015606|GO:0015848 YE1534 68285630c958ccc6cbb149c279ab1472 588 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 59 391 6.6E-79 T 22-04-2016 IPR003776 YcaO-like domain YE1534 68285630c958ccc6cbb149c279ab1472 588 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 11 404 9.7E-161 T 22-04-2016 IPR003776 YcaO-like domain YE3668 8df9f2cd5ac42a700adc8a1f42fe519a 260 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 9 258 5.9E-32 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 YE3668 8df9f2cd5ac42a700adc8a1f42fe519a 260 Gene3D G3DSA:3.40.830.10 1 260 1.4E-98 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 YE3668 8df9f2cd5ac42a700adc8a1f42fe519a 260 PANTHER PTHR30096:SF0 1 260 1.3E-106 T 22-04-2016 YE3668 8df9f2cd5ac42a700adc8a1f42fe519a 260 SUPERFAMILY SSF53213 5 259 3.53E-93 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 YE3668 8df9f2cd5ac42a700adc8a1f42fe519a 260 PIRSF PIRSF006157 1 260 5.4E-94 T 22-04-2016 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type GO:0008270|GO:0016701|GO:0055114 YE3668 8df9f2cd5ac42a700adc8a1f42fe519a 260 PANTHER PTHR30096 1 260 1.3E-106 T 22-04-2016 YE3558 93d7393d74f4d46f83f3b111c3f5884c 161 SUPERFAMILY SSF46894 12 101 6.8E-7 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YE3558 93d7393d74f4d46f83f3b111c3f5884c 161 Gene3D G3DSA:1.10.10.10 17 101 3.7E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1677 cb0f4e1e0ee938115b1e376a8bbcc681 284 Pfam PF05929 Phage capsid scaffolding protein (GPO) serine peptidase 5 277 2.9E-103 T 22-04-2016 IPR009228 Capsid scaffolding protein GpO GO:0019069 YE3326 25421bb09f6cd5134b445d708740c1b8 404 Pfam PF07690 Major Facilitator Superfamily 19 345 2.1E-17 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YE3326 25421bb09f6cd5134b445d708740c1b8 404 PANTHER PTHR23513:SF8 1 402 5.1E-205 T 22-04-2016 YE3326 25421bb09f6cd5134b445d708740c1b8 404 Gene3D G3DSA:1.20.1250.20 16 188 7.7E-13 T 22-04-2016 YE3326 25421bb09f6cd5134b445d708740c1b8 404 PANTHER PTHR23513 1 402 5.1E-205 T 22-04-2016 YE3326 25421bb09f6cd5134b445d708740c1b8 404 Gene3D G3DSA:1.20.1250.20 223 399 6.4E-4 T 22-04-2016 YE3326 25421bb09f6cd5134b445d708740c1b8 404 Hamap MF_01585 Lysophospholipid transporter LplT [lplT]. 1 397 43.071 T 22-04-2016 IPR023727 Lysophospholipid transporter LplT GO:0005886|GO:0051977|GO:0051978 YE3326 25421bb09f6cd5134b445d708740c1b8 404 SUPERFAMILY SSF103473 15 399 5.89E-27 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE1330 844e04364157b35ef695dd86f20ff3a6 147 PANTHER PTHR30505 1 147 2.7E-71 T 22-04-2016 YE1330 844e04364157b35ef695dd86f20ff3a6 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 145 1.3E-36 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YE1330 844e04364157b35ef695dd86f20ff3a6 147 PANTHER PTHR30505:SF3 1 147 2.7E-71 T 22-04-2016 YE1330 844e04364157b35ef695dd86f20ff3a6 147 Gene3D G3DSA:3.40.930.10 1 146 3.0E-54 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YE1330 844e04364157b35ef695dd86f20ff3a6 147 SUPERFAMILY SSF55804 1 145 1.03E-39 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 YE2356 1324260a16ba675058faea488e3a388a 221 Pfam PF13479 AAA domain 4 182 5.5E-7 T 22-04-2016 YE2356 1324260a16ba675058faea488e3a388a 221 SUPERFAMILY SSF52540 4 134 2.23E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2356 1324260a16ba675058faea488e3a388a 221 Gene3D G3DSA:3.40.50.300 4 91 5.7E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE1552 7363acd9119889de9085296ece193a2f 255 Pfam PF02698 DUF218 domain 80 242 7.1E-25 T 22-04-2016 IPR003848 Domain of unknown function DUF218 YE1552 7363acd9119889de9085296ece193a2f 255 Gene3D G3DSA:3.40.50.620 72 209 6.2E-14 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YE1552 7363acd9119889de9085296ece193a2f 255 PANTHER PTHR30336 1 250 4.4E-68 T 22-04-2016 YE1552 7363acd9119889de9085296ece193a2f 255 PANTHER PTHR30336:SF1 1 250 4.4E-68 T 22-04-2016 YE3763 3e749dea63438e254f4576e2d470fae0 90 PANTHER PTHR33705:SF2 1 90 2.3E-40 T 22-04-2016 YE3763 3e749dea63438e254f4576e2d470fae0 90 Gene3D G3DSA:3.30.1340.10 3 89 1.3E-26 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YE3763 3e749dea63438e254f4576e2d470fae0 90 Pfam PF00381 PTS HPr component phosphorylation site 4 84 1.9E-22 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YE3763 3e749dea63438e254f4576e2d470fae0 90 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 4 84 9.1E-22 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YE3763 3e749dea63438e254f4576e2d470fae0 90 PRINTS PR00107 Phosphocarrier protein signature 55 72 4.0E-10 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YE3763 3e749dea63438e254f4576e2d470fae0 90 PRINTS PR00107 Phosphocarrier protein signature 14 30 4.0E-10 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YE3763 3e749dea63438e254f4576e2d470fae0 90 PRINTS PR00107 Phosphocarrier protein signature 40 55 4.0E-10 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YE3763 3e749dea63438e254f4576e2d470fae0 90 PANTHER PTHR33705 1 90 2.3E-40 T 22-04-2016 YE3763 3e749dea63438e254f4576e2d470fae0 90 SUPERFAMILY SSF55594 4 90 4.32E-24 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like YE3763 3e749dea63438e254f4576e2d470fae0 90 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site YE0041 2d1eec9188baf7743c7292612aa226e9 461 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 28 456 4.3E-140 T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 YE0041 2d1eec9188baf7743c7292612aa226e9 461 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 374 394 - T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 YE0041 2d1eec9188baf7743c7292612aa226e9 461 PANTHER PTHR11119 1 461 9.9E-283 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 YE0041 2d1eec9188baf7743c7292612aa226e9 461 TIGRFAM TIGR03173 pbuX: xanthine permease 38 458 7.1E-128 T 22-04-2016 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 YE0041 2d1eec9188baf7743c7292612aa226e9 461 PANTHER PTHR11119:SF44 1 461 9.9E-283 T 22-04-2016 YE0041 2d1eec9188baf7743c7292612aa226e9 461 Pfam PF00860 Permease family 33 425 2.0E-108 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 YE1155 a4c943659b04bf031f5a788200067482 88 Pfam PF03927 NapD protein 6 81 1.2E-24 T 22-04-2016 IPR005623 Chaperone NapD, nitrate reductase assembly YE1155 a4c943659b04bf031f5a788200067482 88 PANTHER PTHR38603 1 88 1.6E-33 T 22-04-2016 YE2763 2cbbee59a50e27038e903ba824af0782 332 PANTHER PTHR32196 2 332 2.3E-118 T 22-04-2016 YE2763 2cbbee59a50e27038e903ba824af0782 332 PANTHER PTHR32196:SF21 2 332 2.3E-118 T 22-04-2016 YE2763 2cbbee59a50e27038e903ba824af0782 332 Pfam PF02653 Branched-chain amino acid transport system / permease component 49 323 6.6E-38 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YE1376 23efdf85296564fcd0c4c26aa583d661 244 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 1 229 30.697 T 22-04-2016 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 YE1376 23efdf85296564fcd0c4c26aa583d661 244 Gene3D G3DSA:3.40.50.1820 2 230 6.2E-47 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE1376 23efdf85296564fcd0c4c26aa583d661 244 PANTHER PTHR10992:SF698 1 230 5.8E-56 T 22-04-2016 YE1376 23efdf85296564fcd0c4c26aa583d661 244 SUPERFAMILY SSF53474 2 230 5.71E-35 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE1376 23efdf85296564fcd0c4c26aa583d661 244 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 1 228 7.9E-75 T 22-04-2016 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 YE1376 23efdf85296564fcd0c4c26aa583d661 244 Pfam PF12697 Alpha/beta hydrolase family 2 222 4.3E-14 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 YE1376 23efdf85296564fcd0c4c26aa583d661 244 PANTHER PTHR10992 1 230 5.8E-56 T 22-04-2016 YE2764 dd2fc4f03032ed2cb3b6db5ab0aeb767 275 SUPERFAMILY SSF51735 2 267 6.86E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain YE2764 dd2fc4f03032ed2cb3b6db5ab0aeb767 275 Pfam PF01370 NAD dependent epimerase/dehydratase family 10 213 1.1E-6 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 YE2764 dd2fc4f03032ed2cb3b6db5ab0aeb767 275 PANTHER PTHR10366:SF289 3 268 2.8E-73 T 22-04-2016 YE2764 dd2fc4f03032ed2cb3b6db5ab0aeb767 275 PANTHER PTHR10366 3 268 2.8E-73 T 22-04-2016 YE2764 dd2fc4f03032ed2cb3b6db5ab0aeb767 275 Gene3D G3DSA:3.40.50.720 2 236 1.0E-21 T 22-04-2016 IPR016040 NAD(P)-binding domain YE3632 9eff592c66283a4f8c96745177f03635 199 SUPERFAMILY SSF46894 20 99 4.25E-7 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YE3632 9eff592c66283a4f8c96745177f03635 199 Gene3D G3DSA:1.10.10.10 17 102 6.5E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE3632 9eff592c66283a4f8c96745177f03635 199 Pfam PF00486 Transcriptional regulatory protein, C terminal 31 99 9.9E-5 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 YE1876 ae57dc1e56c91f9ad7b3d6dc6e1e3e7e 388 SUPERFAMILY SSF82171 15 381 3.4E-31 T 22-04-2016 YE1876 ae57dc1e56c91f9ad7b3d6dc6e1e3e7e 388 Gene3D G3DSA:2.130.10.10 6 384 1.2E-81 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 YE1876 ae57dc1e56c91f9ad7b3d6dc6e1e3e7e 388 Pfam PF14583 Oligogalacturonate lyase 1 386 2.2E-256 T 22-04-2016 IPR027946 Oligogalacturonate lyase domain GO:0045490|GO:0047487 KEGG: 00040+4.2.2.6|UniPathway: UPA00545 YE0149 4c83291796eec44e940c8997d9a3795b 85 SUPERFAMILY SSF55021 3 76 1.88E-12 T 22-04-2016 YE0149 4c83291796eec44e940c8997d9a3795b 85 Gene3D G3DSA:3.30.70.260 1 77 1.9E-12 T 22-04-2016 YE0149 4c83291796eec44e940c8997d9a3795b 85 Pfam PF13710 ACT domain 13 73 1.1E-26 T 22-04-2016 YE2299 49f10b017706a8cdadd7fbce06b68fc9 200 Pfam PF06805 Bacteriophage lambda tail assembly protein I 9 93 1.6E-9 T 22-04-2016 IPR010654 Bacteriophage lambda tail assembly I YE2826 2861e54c84d9707fa9ba7c53396783cb 436 PANTHER PTHR11228:SF7 46 428 1.0E-96 T 22-04-2016 YE2826 2861e54c84d9707fa9ba7c53396783cb 436 Gene3D G3DSA:3.20.20.70 75 404 1.6E-39 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YE2826 2861e54c84d9707fa9ba7c53396783cb 436 SUPERFAMILY SSF102114 74 400 1.7E-36 T 22-04-2016 YE2826 2861e54c84d9707fa9ba7c53396783cb 436 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 328 418 3.4E-12 T 22-04-2016 IPR023885 4Fe4S-binding SPASM domain YE2826 2861e54c84d9707fa9ba7c53396783cb 436 Pfam PF04055 Radical SAM superfamily 80 245 1.3E-12 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 YE2826 2861e54c84d9707fa9ba7c53396783cb 436 PANTHER PTHR11228 46 428 1.0E-96 T 22-04-2016 YE0514 1b25c80fb0a1090994acbc73e49383f8 229 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 203 7.0E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE0514 1b25c80fb0a1090994acbc73e49383f8 229 Gene3D G3DSA:1.10.10.10 153 207 3.8E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0514 1b25c80fb0a1090994acbc73e49383f8 229 Pfam PF08448 PAS fold 20 123 3.7E-5 T 22-04-2016 IPR013656 PAS fold-4 YE0514 1b25c80fb0a1090994acbc73e49383f8 229 SMART SM00421 151 208 2.5E-4 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE0514 1b25c80fb0a1090994acbc73e49383f8 229 SUPERFAMILY SSF46894 147 205 1.84E-12 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YE1886 d71706d2b41b600e409eb699dcbd4f0b 555 PIRSF PIRSF001432 1 555 7.1E-287 T 22-04-2016 IPR010702 Periplasmic pectate lyase GO:0016837|GO:0042597|GO:0045490 YE1886 d71706d2b41b600e409eb699dcbd4f0b 555 Pfam PF06917 Periplasmic pectate lyase 15 539 6.3E-128 T 22-04-2016 IPR010702 Periplasmic pectate lyase GO:0016837|GO:0042597|GO:0045490 YE3492 691cf6983e94b7255c7d6c9542a3478f 250 Pfam PF14348 Domain of unknown function (DUF4400) 54 247 2.4E-67 T 22-04-2016 IPR022266 Integrating conjugative element protein, PFL4697-type YE3492 691cf6983e94b7255c7d6c9542a3478f 250 TIGRFAM TIGR03747 conj_TIGR03747: integrating conjugative element membrane protein, PFL_4697 family 18 250 3.6E-99 T 22-04-2016 IPR022266 Integrating conjugative element protein, PFL4697-type YE0880 79bd3525c2ca906e5fb39c3b56b7d44c 108 Pfam PF10761 Protein of unknown function (DUF2590) 7 104 4.1E-42 T 22-04-2016 IPR019697 Bacteriophage HP1, Orf28 YE2894 4a4266a433401ce905ac4ce6c4c98fb7 368 Pfam PF12698 ABC-2 family transporter protein 25 354 7.3E-49 T 22-04-2016 YE2894 4a4266a433401ce905ac4ce6c4c98fb7 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 290 309 1.4E-6 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 YE2894 4a4266a433401ce905ac4ce6c4c98fb7 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 253 277 1.4E-6 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 YE2894 4a4266a433401ce905ac4ce6c4c98fb7 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 310 329 1.4E-6 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 YE2894 4a4266a433401ce905ac4ce6c4c98fb7 368 PANTHER PTHR30294 1 367 4.9E-264 T 22-04-2016 YE2894 4a4266a433401ce905ac4ce6c4c98fb7 368 PANTHER PTHR30294:SF15 1 367 4.9E-264 T 22-04-2016 YE2454 baf5fce1a252023449e4fe318c45105e 212 Gene3D G3DSA:3.40.1400.10 1 211 5.2E-94 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 YE2454 baf5fce1a252023449e4fe318c45105e 212 PANTHER PTHR30345 1 212 3.5E-36 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 YE2454 baf5fce1a252023449e4fe318c45105e 212 Pfam PF12408 Ribose-5-phosphate isomerase 164 210 2.2E-23 T 22-04-2016 IPR022133 Ribose-5-phosphate isomerase, C-terminal YE2454 baf5fce1a252023449e4fe318c45105e 212 SUPERFAMILY SSF89623 1 161 1.7E-35 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 YE2454 baf5fce1a252023449e4fe318c45105e 212 PANTHER PTHR30345:SF0 1 212 3.5E-36 T 22-04-2016 YE2454 baf5fce1a252023449e4fe318c45105e 212 Pfam PF02502 Ribose/Galactose Isomerase 3 142 3.2E-29 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 YE1275 3a54cd7f4f8001e01a06f3b7026cc01a 103 Gene3D G3DSA:3.30.70.860 32 103 2.3E-34 T 22-04-2016 YE1275 3a54cd7f4f8001e01a06f3b7026cc01a 103 TIGRFAM TIGR00743 TIGR00743: conserved hypothetical protein 11 103 6.2E-40 T 22-04-2016 IPR005272 Conserved hypothetical protein CHP00743 YE1275 3a54cd7f4f8001e01a06f3b7026cc01a 103 Pfam PF04175 Protein of unknown function (DUF406) 13 103 1.9E-40 T 22-04-2016 IPR005272 Conserved hypothetical protein CHP00743 YE1275 3a54cd7f4f8001e01a06f3b7026cc01a 103 PANTHER PTHR38769 3 103 1.5E-32 T 22-04-2016 YE1275 3a54cd7f4f8001e01a06f3b7026cc01a 103 PANTHER PTHR38769:SF1 3 103 1.5E-32 T 22-04-2016 YE2025 8a3c2da1a76757888bac18412e11ccc8 426 Pfam PF00654 Voltage gated chloride channel 79 416 2.2E-77 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 YE2025 8a3c2da1a76757888bac18412e11ccc8 426 SUPERFAMILY SSF81340 5 425 2.75E-88 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 YE2025 8a3c2da1a76757888bac18412e11ccc8 426 PRINTS PR00762 Chloride channel signature 166 185 8.3E-23 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 YE2025 8a3c2da1a76757888bac18412e11ccc8 426 PRINTS PR00762 Chloride channel signature 330 350 8.3E-23 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 YE2025 8a3c2da1a76757888bac18412e11ccc8 426 PRINTS PR00762 Chloride channel signature 365 381 8.3E-23 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 YE2025 8a3c2da1a76757888bac18412e11ccc8 426 PRINTS PR00762 Chloride channel signature 116 135 8.3E-23 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 YE2025 8a3c2da1a76757888bac18412e11ccc8 426 PRINTS PR00762 Chloride channel signature 383 402 8.3E-23 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 YE2025 8a3c2da1a76757888bac18412e11ccc8 426 PANTHER PTHR11689 1 425 1.4E-75 T 22-04-2016 YE2025 8a3c2da1a76757888bac18412e11ccc8 426 Gene3D G3DSA:1.10.3080.10 12 425 2.2E-77 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 YE2025 8a3c2da1a76757888bac18412e11ccc8 426 Hamap MF_01203 Voltage-gated ClC-type chloride channel ClcB [clcB]. 16 426 39.365 T 22-04-2016 IPR023790 Chloride channel, voltage-gated, ClcB GO:0006821|GO:0010447 YE0234 5fbd0000974c8e18d2e9208bb4461926 233 SMART SM00382 26 212 5.6E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain YE0234 5fbd0000974c8e18d2e9208bb4461926 233 PANTHER PTHR24220 3 232 3.3E-138 T 22-04-2016 YE0234 5fbd0000974c8e18d2e9208bb4461926 233 PIRSF PIRSF039137 1 233 2.0E-102 T 22-04-2016 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 YE0234 5fbd0000974c8e18d2e9208bb4461926 233 Pfam PF00005 ABC transporter 17 161 3.0E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE0234 5fbd0000974c8e18d2e9208bb4461926 233 PANTHER PTHR24220:SF568 3 232 3.3E-138 T 22-04-2016 YE0234 5fbd0000974c8e18d2e9208bb4461926 233 Gene3D G3DSA:3.40.50.300 1 228 3.5E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0234 5fbd0000974c8e18d2e9208bb4461926 233 SUPERFAMILY SSF52540 2 230 8.84E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0234 5fbd0000974c8e18d2e9208bb4461926 233 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE4089 3a9c0d73e88213cfe5434363017d3fc6 196 Gene3D G3DSA:3.40.50.2300 2 142 2.3E-26 T 22-04-2016 YE4089 3a9c0d73e88213cfe5434363017d3fc6 196 Pfam PF00072 Response regulator receiver domain 5 114 5.1E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE4089 3a9c0d73e88213cfe5434363017d3fc6 196 ProSitePatterns PS00622 LuxR-type HTH domain signature. 153 180 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE4089 3a9c0d73e88213cfe5434363017d3fc6 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 139 153 1.5E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE4089 3a9c0d73e88213cfe5434363017d3fc6 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 169 1.5E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE4089 3a9c0d73e88213cfe5434363017d3fc6 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 181 1.5E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE4089 3a9c0d73e88213cfe5434363017d3fc6 196 Gene3D G3DSA:1.10.10.10 143 194 3.5E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE4089 3a9c0d73e88213cfe5434363017d3fc6 196 PANTHER PTHR26402 3 195 4.8E-94 T 22-04-2016 YE4089 3a9c0d73e88213cfe5434363017d3fc6 196 Pfam PF00196 Bacterial regulatory proteins, luxR family 137 190 9.7E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE4089 3a9c0d73e88213cfe5434363017d3fc6 196 SMART SM00421 136 193 4.7E-22 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE4089 3a9c0d73e88213cfe5434363017d3fc6 196 SUPERFAMILY SSF46894 125 194 8.16E-20 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YE4089 3a9c0d73e88213cfe5434363017d3fc6 196 SMART SM00448 3 113 7.2E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 YE4089 3a9c0d73e88213cfe5434363017d3fc6 196 PANTHER PTHR26402:SF500 3 195 4.8E-94 T 22-04-2016 YE4089 3a9c0d73e88213cfe5434363017d3fc6 196 SUPERFAMILY SSF52172 2 123 2.28E-24 T 22-04-2016 IPR011006 CheY-like superfamily YE1050 01004753f098a059f37e5be8107a6495 403 Pfam PF00874 PRD domain 217 305 1.2E-17 T 22-04-2016 IPR011608 PRD domain GO:0006355 YE1050 01004753f098a059f37e5be8107a6495 403 PANTHER PTHR30185 1 321 8.4E-14 T 22-04-2016 YE1050 01004753f098a059f37e5be8107a6495 403 PANTHER PTHR30185:SF4 1 321 8.4E-14 T 22-04-2016 YE1050 01004753f098a059f37e5be8107a6495 403 Gene3D G3DSA:1.10.1790.10 209 309 6.9E-19 T 22-04-2016 IPR011608 PRD domain GO:0006355 YE1050 01004753f098a059f37e5be8107a6495 403 SUPERFAMILY SSF63520 208 310 6.15E-20 T 22-04-2016 IPR011608 PRD domain GO:0006355 YE3422 412a868889545d97180bea42b8b85b18 139 PANTHER PTHR30574 10 136 2.4E-36 T 22-04-2016 YE3422 412a868889545d97180bea42b8b85b18 139 PANTHER PTHR30574:SF1 10 136 2.4E-36 T 22-04-2016 YE3422 412a868889545d97180bea42b8b85b18 139 Pfam PF04143 Sulphur transport 43 130 6.0E-7 T 22-04-2016 IPR007272 Sulphur transport domain YE1096 72abe266a2dedb1e1f4895b31ae6b5f8 120 Gene3D G3DSA:2.40.33.40 1 119 2.0E-44 T 22-04-2016 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YE1096 72abe266a2dedb1e1f4895b31ae6b5f8 120 Pfam PF03829 PTS system glucitol/sorbitol-specific IIA component 4 115 1.1E-38 T 22-04-2016 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YE1096 72abe266a2dedb1e1f4895b31ae6b5f8 120 PANTHER PTHR40398 2 120 6.9E-38 T 22-04-2016 YE1096 72abe266a2dedb1e1f4895b31ae6b5f8 120 SUPERFAMILY SSF141530 3 119 8.5E-38 T 22-04-2016 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YE1096 72abe266a2dedb1e1f4895b31ae6b5f8 120 ProDom PD015842 PTS IIA COMPONENT GLUCITOL/SORBITOL-SPECIFIC SYSTEM ENZYME TRANSFERASE SYSTEM PHOSPHOTRANSFERASE EIIA 6 118 2.0E-35 T 22-04-2016 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YE2569 43e57e58b52921e69823a1c730804290 214 Pfam PF04344 Chemotaxis phosphatase, CheZ 16 214 2.0E-77 T 22-04-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- YE2569 43e57e58b52921e69823a1c730804290 214 PANTHER PTHR22617 16 214 7.9E-140 T 22-04-2016 YE2569 43e57e58b52921e69823a1c730804290 214 PIRSF PIRSF002884 1 214 1.1E-88 T 22-04-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- YE2569 43e57e58b52921e69823a1c730804290 214 SUPERFAMILY SSF75708 13 213 1.7E-66 T 22-04-2016 YE2569 43e57e58b52921e69823a1c730804290 214 Gene3D G3DSA:1.20.5.590 1 34 3.4E-18 T 22-04-2016 YE2569 43e57e58b52921e69823a1c730804290 214 PANTHER PTHR22617:SF32 16 214 7.9E-140 T 22-04-2016 YE2569 43e57e58b52921e69823a1c730804290 214 Gene3D G3DSA:1.10.287.500 35 168 2.1E-56 T 22-04-2016 YE2427 76f77be47fe616e6957d5b8695db295e 284 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 49.315 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 YE2427 76f77be47fe616e6957d5b8695db295e 284 Gene3D G3DSA:3.20.20.70 18 281 1.2E-106 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YE2427 76f77be47fe616e6957d5b8695db295e 284 PANTHER PTHR21057:SF6 1 284 7.3E-231 T 22-04-2016 YE2427 76f77be47fe616e6957d5b8695db295e 284 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 1.3E-119 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 YE2427 76f77be47fe616e6957d5b8695db295e 284 SUPERFAMILY SSF51569 3 278 6.41E-104 T 22-04-2016 YE2427 76f77be47fe616e6957d5b8695db295e 284 Pfam PF00793 DAHP synthetase I family 10 275 1.8E-68 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 YE2427 76f77be47fe616e6957d5b8695db295e 284 PANTHER PTHR21057 1 284 7.3E-231 T 22-04-2016 YE2449 4832268765b46fa568e257ab48755c18 144 SUPERFAMILY SSF53697 1 135 4.11E-12 T 22-04-2016 YE2449 4832268765b46fa568e257ab48755c18 144 PANTHER PTHR32502:SF3 1 143 2.2E-75 T 22-04-2016 YE2449 4832268765b46fa568e257ab48755c18 144 Pfam PF01380 SIS domain 3 111 5.7E-11 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 YE2449 4832268765b46fa568e257ab48755c18 144 Gene3D G3DSA:3.40.50.10490 1 136 5.7E-38 T 22-04-2016 YE2449 4832268765b46fa568e257ab48755c18 144 PANTHER PTHR32502 1 143 2.2E-75 T 22-04-2016 YE1990 b4c763697aed289e6e353c5ed8e72431 351 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 6 346 1.2E-139 T 22-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 YE1990 b4c763697aed289e6e353c5ed8e72431 351 PANTHER PTHR30578 1 351 2.0E-169 T 22-04-2016 YE1990 b4c763697aed289e6e353c5ed8e72431 351 Hamap MF_00462 Electron transport complex subunit RsxD [rsxD]. 1 347 28.732 T 22-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 YE1990 b4c763697aed289e6e353c5ed8e72431 351 Pfam PF03116 NQR2, RnfD, RnfE family 3 345 1.4E-109 T 22-04-2016 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 YE1990 b4c763697aed289e6e353c5ed8e72431 351 PANTHER PTHR30578:SF0 1 351 2.0E-169 T 22-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 YE1782 7e767107c3d7271754bf311fe437e447 85 Hamap MF_00507 UPF0181 protein YoaH [yoaH]. 1 59 19.896 T 22-04-2016 IPR005371 Uncharacterised protein family UPF0181 YE1782 7e767107c3d7271754bf311fe437e447 85 Pfam PF03701 Uncharacterised protein family (UPF0181) 1 48 1.9E-27 T 22-04-2016 IPR005371 Uncharacterised protein family UPF0181 YE1782 7e767107c3d7271754bf311fe437e447 85 ProDom PD026807 UPF0181 YOAH YPTB1650 VV20310 VPA0916 VCA0569 YPO1774/Y2534/YP1619 PLU2693 VVA0806 PM0480 1 46 6.0E-19 T 22-04-2016 IPR005371 Uncharacterised protein family UPF0181 YE0937 78b69b1b56f1122558374dc52ca671ef 111 Pfam PF09400 Protein of unknown function (DUF2002) 1 110 6.7E-60 T 22-04-2016 IPR018994 Protein of unknown function DUF2002 YE0937 78b69b1b56f1122558374dc52ca671ef 111 SUPERFAMILY SSF159894 1 111 2.35E-58 T 22-04-2016 YE4106 1f416e607eec4b66069c5a90393c0f23 300 Gene3D G3DSA:3.30.420.40 2 133 3.7E-35 T 22-04-2016 YE4106 1f416e607eec4b66069c5a90393c0f23 300 Gene3D G3DSA:3.30.420.40 134 278 1.5E-45 T 22-04-2016 YE4106 1f416e607eec4b66069c5a90393c0f23 300 SUPERFAMILY SSF53067 1 298 6.67E-60 T 22-04-2016 YE4106 1f416e607eec4b66069c5a90393c0f23 300 PANTHER PTHR18964 5 297 2.2E-95 T 22-04-2016 YE4106 1f416e607eec4b66069c5a90393c0f23 300 ProSitePatterns PS01125 ROK family signature. 131 158 - T 22-04-2016 IPR000600 ROK family YE4106 1f416e607eec4b66069c5a90393c0f23 300 PANTHER PTHR18964:SF134 5 297 2.2E-95 T 22-04-2016 YE4106 1f416e607eec4b66069c5a90393c0f23 300 Pfam PF00480 ROK family 4 297 6.7E-75 T 22-04-2016 IPR000600 ROK family YE1655 5220003ee27c1e7d10036def6633e5fa 315 PANTHER PTHR34611 13 315 2.1E-191 T 22-04-2016 YE1655 5220003ee27c1e7d10036def6633e5fa 315 PANTHER PTHR34611:SF3 13 315 2.1E-191 T 22-04-2016 YE1655 5220003ee27c1e7d10036def6633e5fa 315 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 20 313 6.9E-65 T 22-04-2016 IPR010106 Conserved hypothetical protein CHP01784 YE1655 5220003ee27c1e7d10036def6633e5fa 315 Pfam PF04754 Putative transposase, YhgA-like 19 220 8.5E-86 T 22-04-2016 IPR006842 Transposase (putative), YhgA-like YE0069 63ce96ae39525b6c6f2533f85a069312 425 Pfam PF00534 Glycosyl transferases group 1 248 398 2.1E-11 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 YE0069 63ce96ae39525b6c6f2533f85a069312 425 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 33 211 1.3E-67 T 22-04-2016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675|UniPathway: UPA00958 YE0069 63ce96ae39525b6c6f2533f85a069312 425 SUPERFAMILY SSF53756 57 420 3.19E-17 T 22-04-2016 YE0069 63ce96ae39525b6c6f2533f85a069312 425 PANTHER PTHR23417:SF2 1 111 1.2E-150 T 22-04-2016 YE0069 63ce96ae39525b6c6f2533f85a069312 425 PANTHER PTHR23417:SF2 190 425 1.2E-150 T 22-04-2016 YE0069 63ce96ae39525b6c6f2533f85a069312 425 PANTHER PTHR23417:SF2 130 140 1.2E-150 T 22-04-2016 YE0069 63ce96ae39525b6c6f2533f85a069312 425 PANTHER PTHR23417 1 111 1.2E-150 T 22-04-2016 YE0069 63ce96ae39525b6c6f2533f85a069312 425 PANTHER PTHR23417 190 425 1.2E-150 T 22-04-2016 YE0069 63ce96ae39525b6c6f2533f85a069312 425 PANTHER PTHR23417 130 140 1.2E-150 T 22-04-2016 YE3313 003facdb611b8730c3febf81b97fb187 128 Pfam PF12528 Type II secretion prepilin peptidase dependent protein C 43 123 2.5E-20 T 22-04-2016 IPR022204 Prepilin peptidase dependent protein C YE3313 003facdb611b8730c3febf81b97fb187 128 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 19 39 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site YE1638 5b0e8d97c03e1ec89aa0f1c8b0aa8b6e 274 Gene3D G3DSA:3.20.10.10 123 248 8.2E-38 T 22-04-2016 YE1638 5b0e8d97c03e1ec89aa0f1c8b0aa8b6e 274 Gene3D G3DSA:3.30.470.10 1 106 4.8E-32 T 22-04-2016 YE1638 5b0e8d97c03e1ec89aa0f1c8b0aa8b6e 274 ProSitePatterns PS00770 Aminotransferases class-IV signature. 173 202 - T 22-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 YE1638 5b0e8d97c03e1ec89aa0f1c8b0aa8b6e 274 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 3 268 7.5E-110 T 22-04-2016 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543|UniPathway: UPA00077 YE1638 5b0e8d97c03e1ec89aa0f1c8b0aa8b6e 274 PANTHER PTHR11825:SF55 1 248 1.6E-90 T 22-04-2016 YE1638 5b0e8d97c03e1ec89aa0f1c8b0aa8b6e 274 SUPERFAMILY SSF56752 1 251 1.7E-64 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 YE1638 5b0e8d97c03e1ec89aa0f1c8b0aa8b6e 274 Pfam PF01063 Amino-transferase class IV 24 247 2.5E-47 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 YE1638 5b0e8d97c03e1ec89aa0f1c8b0aa8b6e 274 PANTHER PTHR11825 1 248 1.6E-90 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 YE3934 2376c556edc89ef7a0402f1a32230da3 244 Pfam PF13309 HTH domain 175 232 3.4E-19 T 22-04-2016 YE3934 2376c556edc89ef7a0402f1a32230da3 244 Pfam PF08348 YheO-like PAS domain 33 141 5.3E-36 T 22-04-2016 IPR013559 YheO-like YE3934 2376c556edc89ef7a0402f1a32230da3 244 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 31 157 1.0E-62 T 22-04-2016 IPR013559 YheO-like YE3934 2376c556edc89ef7a0402f1a32230da3 244 PANTHER PTHR35568 14 241 9.5E-182 T 22-04-2016 YE3934 2376c556edc89ef7a0402f1a32230da3 244 PANTHER PTHR35568:SF3 14 241 9.5E-182 T 22-04-2016 YE0499 5d15f456f2bcae339189ac616dad4869 149 SUPERFAMILY SSF102400 1 143 9.55E-48 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 YE0499 5d15f456f2bcae339189ac616dad4869 149 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 141 3.8E-39 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 YE0499 5d15f456f2bcae339189ac616dad4869 149 PANTHER PTHR38767 2 149 8.5E-68 T 22-04-2016 YE0499 5d15f456f2bcae339189ac616dad4869 149 Gene3D G3DSA:3.40.50.10110 1 143 1.7E-53 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 YE0473 b93f973eae38e738fadc2d34050033fa 262 PANTHER PTHR24220 12 262 2.9E-145 T 22-04-2016 YE0473 b93f973eae38e738fadc2d34050033fa 262 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 YE0473 b93f973eae38e738fadc2d34050033fa 262 Pfam PF00005 ABC transporter 27 183 1.8E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 YE0473 b93f973eae38e738fadc2d34050033fa 262 TIGRFAM TIGR02323 CP_lyasePhnK: phosphonate C-P lyase system protein PhnK 9 260 7.1E-120 T 22-04-2016 IPR012700 Phosphonate C-P lyase system, PhnK YE0473 b93f973eae38e738fadc2d34050033fa 262 PIRSF PIRSF037116 1 262 5.7E-142 T 22-04-2016 IPR012700 Phosphonate C-P lyase system, PhnK YE0473 b93f973eae38e738fadc2d34050033fa 262 SUPERFAMILY SSF52540 7 258 2.01E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0473 b93f973eae38e738fadc2d34050033fa 262 Gene3D G3DSA:3.40.50.300 9 257 2.4E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE0473 b93f973eae38e738fadc2d34050033fa 262 PANTHER PTHR24220:SF554 12 262 2.9E-145 T 22-04-2016 YE0473 b93f973eae38e738fadc2d34050033fa 262 SMART SM00382 35 233 9.2E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain YE0202 1b238de88d1d30d39163b6858b6b9537 156 PANTHER PTHR12418:SF35 9 155 1.1E-80 T 22-04-2016 YE0202 1b238de88d1d30d39163b6858b6b9537 156 Gene3D G3DSA:3.10.129.10 19 155 7.6E-28 T 22-04-2016 IPR029069 HotDog domain YE0202 1b238de88d1d30d39163b6858b6b9537 156 Pfam PF03061 Thioesterase superfamily 59 144 1.2E-13 T 22-04-2016 IPR006683 Thioesterase domain YE0202 1b238de88d1d30d39163b6858b6b9537 156 SUPERFAMILY SSF54637 13 155 7.67E-23 T 22-04-2016 IPR029069 HotDog domain YE0202 1b238de88d1d30d39163b6858b6b9537 156 PANTHER PTHR12418 9 155 1.1E-80 T 22-04-2016 YE0202 1b238de88d1d30d39163b6858b6b9537 156 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 27 154 2.6E-14 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain YE1463 8edd033ceb29f06d0487b890b858c0a2 206 PANTHER PTHR11260 1 203 2.2E-82 T 22-04-2016 YE1463 8edd033ceb29f06d0487b890b858c0a2 206 PANTHER PTHR11260:SF157 1 203 2.2E-82 T 22-04-2016 YE1463 8edd033ceb29f06d0487b890b858c0a2 206 Gene3D G3DSA:1.20.1050.10 82 203 1.7E-24 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like YE1463 8edd033ceb29f06d0487b890b858c0a2 206 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 74 8.6E-15 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 YE1463 8edd033ceb29f06d0487b890b858c0a2 206 SUPERFAMILY SSF52833 1 83 1.12E-23 T 22-04-2016 IPR012336 Thioredoxin-like fold YE1463 8edd033ceb29f06d0487b890b858c0a2 206 SUPERFAMILY SSF47616 72 202 8.07E-26 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like YE1463 8edd033ceb29f06d0487b890b858c0a2 206 Pfam PF00043 Glutathione S-transferase, C-terminal domain 123 194 3.3E-7 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal YE1463 8edd033ceb29f06d0487b890b858c0a2 206 Gene3D G3DSA:3.40.30.10 1 81 7.6E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold YE2027 239392652ce6eca21d53161050289706 108 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 1 106 1.2E-42 T 22-04-2016 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 YE2027 239392652ce6eca21d53161050289706 108 SUPERFAMILY SSF103481 7 105 5.36E-5 T 22-04-2016 YE2027 239392652ce6eca21d53161050289706 108 PANTHER PTHR36116 1 106 9.2E-44 T 22-04-2016 YE2027 239392652ce6eca21d53161050289706 108 PANTHER PTHR36116:SF1 1 106 9.2E-44 T 22-04-2016 YE2027 239392652ce6eca21d53161050289706 108 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 2 106 22.777 T 22-04-2016 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 YE0290 161141cd7373918c24cc57b5d8aeaaaf 262 PANTHER PTHR34266 1 259 3.3E-161 T 22-04-2016 YE0290 161141cd7373918c24cc57b5d8aeaaaf 262 SUPERFAMILY SSF110399 1 236 6.67E-83 T 22-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 YE0290 161141cd7373918c24cc57b5d8aeaaaf 262 Pfam PF05690 Thiazole biosynthesis protein ThiG 3 248 6.0E-105 T 22-04-2016 YE0290 161141cd7373918c24cc57b5d8aeaaaf 262 Gene3D G3DSA:3.20.20.70 1 258 5.7E-62 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YE0290 161141cd7373918c24cc57b5d8aeaaaf 262 Hamap MF_00443 Thiazole synthase [thiG]. 1 254 42.858 T 22-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 YE1314 0f835d951981e6f1e9314c56ae2b29db 169 PANTHER PTHR36926:SF1 1 168 7.3E-87 T 22-04-2016 YE1314 0f835d951981e6f1e9314c56ae2b29db 169 Pfam PF02674 Colicin V production protein 4 142 8.4E-36 T 22-04-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 YE1314 0f835d951981e6f1e9314c56ae2b29db 169 PANTHER PTHR36926 1 168 7.3E-87 T 22-04-2016 YE0515 eb12cf669a452a432fdd4d25c622c020 435 PANTHER PTHR30569 1 424 6.0E-77 T 22-04-2016 IPR030191 Cytosine permease GO:0015209|GO:0016021 YE0515 eb12cf669a452a432fdd4d25c622c020 435 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 12 398 1.3E-21 T 22-04-2016 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 YE3671 b113438aaf74709a0dff4a11ca08348d 99 PANTHER PTHR38040:SF1 2 95 6.6E-42 T 22-04-2016 YE3671 b113438aaf74709a0dff4a11ca08348d 99 PANTHER PTHR38040 2 95 6.6E-42 T 22-04-2016 YE3671 b113438aaf74709a0dff4a11ca08348d 99 Pfam PF04380 Membrane fusogenic activity 1 78 2.2E-27 T 22-04-2016 IPR007475 Membrane fusogenic activity YE2781 bd75db083245dabcf9e61abaf021cb8a 615 PANTHER PTHR30441 1 615 2.2E-193 T 22-04-2016 YE2781 bd75db083245dabcf9e61abaf021cb8a 615 PANTHER PTHR30441:SF4 1 615 2.2E-193 T 22-04-2016 YE2781 bd75db083245dabcf9e61abaf021cb8a 615 Pfam PF05170 AsmA family 3 269 5.2E-22 T 22-04-2016 IPR007844 AsmA YE2781 bd75db083245dabcf9e61abaf021cb8a 615 Pfam PF13502 AsmA-like C-terminal region 356 545 1.3E-19 T 22-04-2016 IPR032712 AsmA-like, C-terminal YE4165 d9c1226c9da1e776a03910d8b6b8dc37 112 Pfam PF07119 Protein of unknown function (DUF1375) 13 76 1.4E-15 T 22-04-2016 IPR010780 Protein of unknown function DUF1375 YE2632 307f24c18f99a035abbfee6aaeda3c30 587 SUPERFAMILY SSF52540 138 298 1.43E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2632 307f24c18f99a035abbfee6aaeda3c30 587 SMART SM00490 186 283 3.3E-8 T 22-04-2016 IPR001650 Helicase, C-terminal YE2632 307f24c18f99a035abbfee6aaeda3c30 587 Gene3D G3DSA:3.40.50.300 138 282 8.3E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2632 307f24c18f99a035abbfee6aaeda3c30 587 Pfam PF00271 Helicase conserved C-terminal domain 139 281 1.3E-7 T 22-04-2016 IPR001650 Helicase, C-terminal YE3555 1ceff30488a234ff1ebb3e4d6c9e3d1e 214 ProDom PD038222 INVASION PLASMID OXYGEN-REGULATED III SECRETION MXIN TYPE SYSTEM PATHWAY ORGB 14 191 1.0E-60 T 22-04-2016 YE3780 2c145f45650949454941699818dcc6a8 370 PANTHER PTHR32328 103 359 5.5E-171 T 22-04-2016 YE3780 2c145f45650949454941699818dcc6a8 370 PANTHER PTHR32328 1 85 5.5E-171 T 22-04-2016 YE3780 2c145f45650949454941699818dcc6a8 370 SUPERFAMILY SSF53383 7 368 1.06E-34 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YE3780 2c145f45650949454941699818dcc6a8 370 Gene3D G3DSA:3.40.640.10 26 242 7.4E-27 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YE3780 2c145f45650949454941699818dcc6a8 370 TIGRFAM TIGR01437 selA_rel: uncharacterized pyridoxal phosphate-dependent enzyme 4 366 5.6E-178 T 22-04-2016 IPR006337 Pyridoxal phosphate-dependent enzyme, SelA-like KEGG: 00030+4.3.1.29|MetaCyc: PWY-7310 YE3780 2c145f45650949454941699818dcc6a8 370 Pfam PF03841 L-seryl-tRNA selenium transferase 14 270 2.0E-13 T 22-04-2016 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 YE3780 2c145f45650949454941699818dcc6a8 370 PANTHER PTHR32328:SF1 103 359 5.5E-171 T 22-04-2016 YE3780 2c145f45650949454941699818dcc6a8 370 PANTHER PTHR32328:SF1 1 85 5.5E-171 T 22-04-2016 YE3665 a433e65c0da91f14c46da0c0d7d727ad 493 Pfam PF02321 Outer membrane efflux protein 25 210 2.9E-28 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 YE3665 a433e65c0da91f14c46da0c0d7d727ad 493 Pfam PF02321 Outer membrane efflux protein 234 424 2.0E-35 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 YE3665 a433e65c0da91f14c46da0c0d7d727ad 493 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 21 439 2.6E-133 T 22-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 YE3665 a433e65c0da91f14c46da0c0d7d727ad 493 Gene3D G3DSA:1.20.1600.10 12 430 4.8E-91 T 22-04-2016 YE3665 a433e65c0da91f14c46da0c0d7d727ad 493 PANTHER PTHR30026:SF3 1 450 7.6E-172 T 22-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 YE3665 a433e65c0da91f14c46da0c0d7d727ad 493 PANTHER PTHR30026 1 450 7.6E-172 T 22-04-2016 YE3665 a433e65c0da91f14c46da0c0d7d727ad 493 SUPERFAMILY SSF56954 25 442 3.53E-95 T 22-04-2016 YE2751 db09b785aa932375491e9ae4fa03bc10 327 Gene3D G3DSA:3.40.50.2300 148 281 1.8E-24 T 22-04-2016 YE2751 db09b785aa932375491e9ae4fa03bc10 327 Gene3D G3DSA:3.40.50.2300 29 147 4.1E-27 T 22-04-2016 YE2751 db09b785aa932375491e9ae4fa03bc10 327 SUPERFAMILY SSF53822 29 325 1.22E-64 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YE2751 db09b785aa932375491e9ae4fa03bc10 327 Pfam PF13407 Periplasmic binding protein domain 37 288 5.1E-52 T 22-04-2016 IPR025997 Periplasmic binding protein YE2751 db09b785aa932375491e9ae4fa03bc10 327 PANTHER PTHR32196 30 295 1.5E-116 T 22-04-2016 YE2751 db09b785aa932375491e9ae4fa03bc10 327 PANTHER PTHR32196:SF36 30 295 1.5E-116 T 22-04-2016 YE3508 0ee3d903f278580919d3f042359726b8 82 Pfam PF10387 Protein of unknown function (DUF2442) 6 71 4.2E-19 T 22-04-2016 IPR018841 Protein of unknown function DUF2442 YE3464 6c2d1098c6cb942f3ec1000de135da74 87 Gene3D G3DSA:3.40.190.10 4 52 1.2E-4 T 22-04-2016 YE1352 f989dbc78ee31675fba1bd6250a9a3f9 181 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 16 157 6.8E-34 T 22-04-2016 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 YE1352 f989dbc78ee31675fba1bd6250a9a3f9 181 PANTHER PTHR33269 1 180 3.8E-110 T 22-04-2016 YE1352 f989dbc78ee31675fba1bd6250a9a3f9 181 PANTHER PTHR33269:SF2 1 180 3.8E-110 T 22-04-2016 YE2521 073b4920a14d01fcef37b2145cdb659d 381 PANTHER PTHR30244:SF1 2 274 1.1E-118 T 22-04-2016 YE2521 073b4920a14d01fcef37b2145cdb659d 381 PANTHER PTHR30244:SF1 291 381 1.1E-118 T 22-04-2016 YE2521 073b4920a14d01fcef37b2145cdb659d 381 Pfam PF00700 Bacterial flagellin C-terminal helical region 296 380 3.0E-30 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YE2521 073b4920a14d01fcef37b2145cdb659d 381 SUPERFAMILY SSF64518 1 381 4.18E-96 T 22-04-2016 YE2521 073b4920a14d01fcef37b2145cdb659d 381 PRINTS PR00207 Flagellin signature 110 133 5.3E-30 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 YE2521 073b4920a14d01fcef37b2145cdb659d 381 PRINTS PR00207 Flagellin signature 75 94 5.3E-30 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 YE2521 073b4920a14d01fcef37b2145cdb659d 381 PRINTS PR00207 Flagellin signature 36 53 5.3E-30 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 YE2521 073b4920a14d01fcef37b2145cdb659d 381 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 139 5.0E-42 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YE2521 073b4920a14d01fcef37b2145cdb659d 381 PANTHER PTHR30244 2 274 1.1E-118 T 22-04-2016 YE2521 073b4920a14d01fcef37b2145cdb659d 381 PANTHER PTHR30244 291 381 1.1E-118 T 22-04-2016 YE2521 073b4920a14d01fcef37b2145cdb659d 381 Gene3D G3DSA:1.20.1330.10 53 173 2.4E-50 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YE2521 073b4920a14d01fcef37b2145cdb659d 381 Gene3D G3DSA:1.20.1330.10 283 337 2.4E-50 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YE2966 c3957c36bc931d4a370461cdb21129ab 483 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 204 222 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site YE2966 c3957c36bc931d4a370461cdb21129ab 483 Gene3D G3DSA:2.150.10.10 138 342 2.7E-34 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal YE2966 c3957c36bc931d4a370461cdb21129ab 483 SUPERFAMILY SSF51120 151 317 1.92E-25 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal YE2966 c3957c36bc931d4a370461cdb21129ab 483 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 195 213 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site YE2966 c3957c36bc931d4a370461cdb21129ab 483 PRINTS PR00313 NodO calcium binding signature 264 273 1.1E-11 T 22-04-2016 YE2966 c3957c36bc931d4a370461cdb21129ab 483 PRINTS PR00313 NodO calcium binding signature 169 180 1.1E-11 T 22-04-2016 YE2966 c3957c36bc931d4a370461cdb21129ab 483 PRINTS PR00313 NodO calcium binding signature 246 254 1.1E-11 T 22-04-2016 YE2966 c3957c36bc931d4a370461cdb21129ab 483 PRINTS PR00313 NodO calcium binding signature 208 216 1.1E-11 T 22-04-2016 YE2966 c3957c36bc931d4a370461cdb21129ab 483 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 186 204 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site YE2966 c3957c36bc931d4a370461cdb21129ab 483 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 242 260 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site YE2966 c3957c36bc931d4a370461cdb21129ab 483 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 207 224 0.86 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 YE2966 c3957c36bc931d4a370461cdb21129ab 483 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 255 270 0.67 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 YE2966 c3957c36bc931d4a370461cdb21129ab 483 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 153 170 0.097 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 YE2966 c3957c36bc931d4a370461cdb21129ab 483 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 240 253 0.0052 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 YE2966 c3957c36bc931d4a370461cdb21129ab 483 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 189 205 0.094 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 YE2966 c3957c36bc931d4a370461cdb21129ab 483 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 172 186 6.9 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 YE1282 85a84321a6657feb99f2ed1170e19b73 275 PIRSF PIRSF018455 3 275 1.6E-117 T 22-04-2016 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 YE1282 85a84321a6657feb99f2ed1170e19b73 275 Gene3D G3DSA:3.30.1380.10 21 271 1.2E-104 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain YE1282 85a84321a6657feb99f2ed1170e19b73 275 SUPERFAMILY SSF55166 21 271 1.8E-99 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain YE1282 85a84321a6657feb99f2ed1170e19b73 275 Hamap MF_01623 Penicillin-insensitive murein endopeptidase [mepA]. 1 273 62.502 T 22-04-2016 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 YE1282 85a84321a6657feb99f2ed1170e19b73 275 Pfam PF03411 Penicillin-insensitive murein endopeptidase 36 269 1.5E-95 T 22-04-2016 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 YE4179 3b885e25a785c6032b9da1d10dc67473 399 Pfam PF07055 Enoyl reductase FAD binding domain 324 387 1.0E-27 T 22-04-2016 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 YE4179 3b885e25a785c6032b9da1d10dc67473 399 PANTHER PTHR37480 2 399 6.2E-258 T 22-04-2016 YE4179 3b885e25a785c6032b9da1d10dc67473 399 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 79 2.3E-38 T 22-04-2016 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 YE4179 3b885e25a785c6032b9da1d10dc67473 399 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 393 54.263 T 22-04-2016 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 YE4179 3b885e25a785c6032b9da1d10dc67473 399 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 317 7.7E-108 T 22-04-2016 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 YE2292 a0b0d23af61995cdf792c04f190d69fa 152 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 55 145 2.7E-13 T 22-04-2016 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly YE3786 e55da9d048bfc64d55686271863a8c0a 114 SUPERFAMILY SSF63520 25 113 2.62E-8 T 22-04-2016 IPR011608 PRD domain GO:0006355 YE3786 e55da9d048bfc64d55686271863a8c0a 114 Gene3D G3DSA:1.10.1790.10 18 111 8.7E-5 T 22-04-2016 IPR011608 PRD domain GO:0006355 YE3786 e55da9d048bfc64d55686271863a8c0a 114 TIGRFAM TIGR03582 EF_0829: PRD domain protein, EF_0829/AHA_3910 family 22 112 2.7E-39 T 22-04-2016 IPR020044 PRD domain protein, EF0829/AHA3910 YE2365 54ee5d8f1ac0059b5fd17e00654114b2 148 PANTHER PTHR37421:SF1 1 148 6.3E-82 T 22-04-2016 YE2365 54ee5d8f1ac0059b5fd17e00654114b2 148 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 2 145 41.115 T 22-04-2016 IPR008228 Uncharacterised conserved protein UCP006173 YE2365 54ee5d8f1ac0059b5fd17e00654114b2 148 PANTHER PTHR37421 1 148 6.3E-82 T 22-04-2016 YE2365 54ee5d8f1ac0059b5fd17e00654114b2 148 PIRSF PIRSF006173 1 145 3.3E-65 T 22-04-2016 IPR008228 Uncharacterised conserved protein UCP006173 YE2365 54ee5d8f1ac0059b5fd17e00654114b2 148 Pfam PF03692 Putative zinc- or iron-chelating domain 24 92 2.3E-7 T 22-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein YE3150 d3d2275af3336628ac9e9222f3394f39 198 PANTHER PTHR11019:SF4 1 194 1.3E-72 T 22-04-2016 YE3150 d3d2275af3336628ac9e9222f3394f39 198 Pfam PF01965 DJ-1/PfpI family 4 169 1.4E-44 T 22-04-2016 IPR002818 DJ-1/PfpI YE3150 d3d2275af3336628ac9e9222f3394f39 198 PANTHER PTHR11019 1 194 1.3E-72 T 22-04-2016 YE3150 d3d2275af3336628ac9e9222f3394f39 198 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 5 182 4.3E-65 T 22-04-2016 IPR006287 DJ-1 YE3150 d3d2275af3336628ac9e9222f3394f39 198 Gene3D G3DSA:3.40.50.880 4 189 1.4E-56 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YE3150 d3d2275af3336628ac9e9222f3394f39 198 SUPERFAMILY SSF52317 5 189 4.22E-47 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like YE2841 b1727c8b6c14f15727f46360e53c2ff6 221 Pfam PF10099 Anti-sigma-K factor rskA 61 216 5.5E-24 T 22-04-2016 IPR018764 Anti-sigma K factor RskA GO:0005886|GO:0016021 YE2874 9b2131aa97164fa53b68aa97f550416b 156 PANTHER PTHR37805:SF1 1 156 2.3E-84 T 22-04-2016 YE2874 9b2131aa97164fa53b68aa97f550416b 156 Pfam PF07308 Protein of unknown function (DUF1456) 86 153 3.1E-25 T 22-04-2016 IPR009921 Domain of unknown function DUF1456 YE2874 9b2131aa97164fa53b68aa97f550416b 156 Pfam PF07308 Protein of unknown function (DUF1456) 3 70 1.9E-27 T 22-04-2016 IPR009921 Domain of unknown function DUF1456 YE2874 9b2131aa97164fa53b68aa97f550416b 156 PANTHER PTHR37805 1 156 2.3E-84 T 22-04-2016 YE2721 c4c4bebc435ab4ed579f2ab5329b22f5 200 Gene3D G3DSA:3.30.950.10 104 198 2.6E-21 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 YE2721 c4c4bebc435ab4ed579f2ab5329b22f5 200 TIGRFAM TIGR02467 CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 4 195 2.7E-57 T 22-04-2016 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase GO:0008276|GO:0009236 YE2721 c4c4bebc435ab4ed579f2ab5329b22f5 200 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 1 185 1.4E-29 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 YE2721 c4c4bebc435ab4ed579f2ab5329b22f5 200 SUPERFAMILY SSF53790 1 197 1.83E-41 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 YE2721 c4c4bebc435ab4ed579f2ab5329b22f5 200 Gene3D G3DSA:3.40.1010.10 1 103 5.7E-28 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 YE1616 9ec630ea1ca4991fd25949762340661f 361 Pfam PF03916 Polysulphide reductase, NrfD 13 300 1.1E-18 T 22-04-2016 IPR005614 NrfD family YE2381 e15f9aa0ad704b3c9a984785d0651525 126 Hamap MF_01598 Spermidine export protein MdtJ [mdtJ]. 2 126 32.717 T 22-04-2016 IPR023740 Spermidine export protein MdtJ GO:0005886|GO:0015606|GO:0015848 YE2381 e15f9aa0ad704b3c9a984785d0651525 126 PANTHER PTHR30561:SF2 1 112 1.1E-77 T 22-04-2016 IPR023740 Spermidine export protein MdtJ GO:0005886|GO:0015606|GO:0015848 YE2381 e15f9aa0ad704b3c9a984785d0651525 126 PANTHER PTHR30561 1 112 1.1E-77 T 22-04-2016 YE2381 e15f9aa0ad704b3c9a984785d0651525 126 Pfam PF00893 Small Multidrug Resistance protein 4 94 2.8E-23 T 22-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 YE2381 e15f9aa0ad704b3c9a984785d0651525 126 SUPERFAMILY SSF103481 7 108 1.07E-16 T 22-04-2016 YE4061 81715ae015072e663c28a847524aa03a 240 PIRSF PIRSF001273 2 237 2.9E-100 T 22-04-2016 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26|UniPathway: UPA00609 YE4061 81715ae015072e663c28a847524aa03a 240 Gene3D G3DSA:3.30.428.30 13 234 2.1E-98 T 22-04-2016 YE4061 81715ae015072e663c28a847524aa03a 240 Pfam PF02611 CDP-diacylglycerol pyrophosphatase 16 233 2.1E-91 T 22-04-2016 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26|UniPathway: UPA00609 YE4061 81715ae015072e663c28a847524aa03a 240 SUPERFAMILY SSF54197 16 233 7.99E-87 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 YE3641 40af1990fbaf8cab197e848d79e9a6fa 255 Gene3D G3DSA:1.25.40.10 135 189 6.3E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YE3641 40af1990fbaf8cab197e848d79e9a6fa 255 SUPERFAMILY SSF48452 53 225 2.9E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YE3641 40af1990fbaf8cab197e848d79e9a6fa 255 Gene3D G3DSA:1.25.40.10 35 134 6.2E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YE0017 d035f1671ffee6edcf9c298cd8f97595 199 Gene3D G3DSA:3.90.550.10 5 193 4.2E-55 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YE0017 d035f1671ffee6edcf9c298cd8f97595 199 Pfam PF12804 MobA-like NTP transferase domain 10 159 4.2E-34 T 22-04-2016 IPR025877 MobA-like NTP transferase YE0017 d035f1671ffee6edcf9c298cd8f97595 199 SUPERFAMILY SSF53448 4 191 7.09E-34 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YE0017 d035f1671ffee6edcf9c298cd8f97595 199 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 6 191 28.472 T 22-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 YE0017 d035f1671ffee6edcf9c298cd8f97595 199 PANTHER PTHR19136 3 196 5.4E-55 T 22-04-2016 YE0017 d035f1671ffee6edcf9c298cd8f97595 199 PANTHER PTHR19136:SF81 3 196 5.4E-55 T 22-04-2016 YE0017 d035f1671ffee6edcf9c298cd8f97595 199 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 8 188 4.6E-67 T 22-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 YE2636 44170ec15c2ed24e4d74385b64112b6b 232 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 63 77 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 YE2636 44170ec15c2ed24e4d74385b64112b6b 232 PANTHER PTHR11079:SF73 20 231 1.6E-52 T 22-04-2016 YE2636 44170ec15c2ed24e4d74385b64112b6b 232 Pfam PF00849 RNA pseudouridylate synthase 25 181 4.7E-25 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 YE2636 44170ec15c2ed24e4d74385b64112b6b 232 PANTHER PTHR11079 20 231 1.6E-52 T 22-04-2016 YE2636 44170ec15c2ed24e4d74385b64112b6b 232 SUPERFAMILY SSF55120 13 227 1.18E-56 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 YE2101 c226d02823c1a9c8b2cbe2188c305a9a 110 Pfam PF00893 Small Multidrug Resistance protein 4 94 1.8E-27 T 22-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 YE2101 c226d02823c1a9c8b2cbe2188c305a9a 110 PANTHER PTHR30561 1 110 3.4E-58 T 22-04-2016 YE2101 c226d02823c1a9c8b2cbe2188c305a9a 110 SUPERFAMILY SSF103481 6 105 6.15E-20 T 22-04-2016 YE2101 c226d02823c1a9c8b2cbe2188c305a9a 110 PANTHER PTHR30561:SF1 1 110 3.4E-58 T 22-04-2016 YE2999 f9a92a0b756eadd786031e2fc5c727d4 220 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 12 74 6.3E-14 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 YE2999 f9a92a0b756eadd786031e2fc5c727d4 220 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 9 219 31.493 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 YE2999 f9a92a0b756eadd786031e2fc5c727d4 220 SUPERFAMILY SSF52374 11 219 1.01E-58 T 22-04-2016 YE2999 f9a92a0b756eadd786031e2fc5c727d4 220 Gene3D G3DSA:3.40.50.620 12 219 3.6E-64 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YE2999 f9a92a0b756eadd786031e2fc5c727d4 220 Pfam PF01467 Cytidylyltransferase-like 13 193 1.2E-33 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 YE2999 f9a92a0b756eadd786031e2fc5c727d4 220 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 13 218 1.7E-57 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 YE2999 f9a92a0b756eadd786031e2fc5c727d4 220 PANTHER PTHR12039 10 220 1.8E-60 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 YE2927 15227b942a4c8bbf42df320842bba781 242 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 22 229 1.6E-63 T 22-04-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 YE2927 15227b942a4c8bbf42df320842bba781 242 Pfam PF04973 Nicotinamide mononucleotide transporter 23 227 3.6E-54 T 22-04-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 YE2927 15227b942a4c8bbf42df320842bba781 242 PANTHER PTHR36122:SF2 133 242 1.9E-131 T 22-04-2016 YE2927 15227b942a4c8bbf42df320842bba781 242 PANTHER PTHR36122:SF2 1 110 1.9E-131 T 22-04-2016 YE2927 15227b942a4c8bbf42df320842bba781 242 PANTHER PTHR36122 133 242 1.9E-131 T 22-04-2016 YE2927 15227b942a4c8bbf42df320842bba781 242 PANTHER PTHR36122 1 110 1.9E-131 T 22-04-2016 YE3472A cd1e2e33f766d189621d0fa2087c94bb 120 Pfam PF06953 Arsenical resistance operon trans-acting repressor ArsD 1 120 2.0E-49 T 22-04-2016 IPR010712 Arsenical-resistance operon trans-acting repressor ArsD GO:0003677|GO:0045892|GO:0046685 YE2145 8ec742f8489895c48cd2607aeeab10e2 78 Pfam PF07869 Protein of unknown function (DUF1656) 19 69 8.6E-14 T 22-04-2016 IPR012451 Protein of unknown function DUF1656 YE1977 ca9713dfc77de2f0d12087b292f27c33 82 Pfam PF09932 Uncharacterized conserved protein (DUF2164) 4 77 5.9E-25 T 22-04-2016 IPR018680 Protein of unknown function DUF2164 YE3078 d53261f16efd256789c0dabd33df807f 288 SUPERFAMILY SSF53448 7 214 9.64E-58 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YE3078 d53261f16efd256789c0dabd33df807f 288 PANTHER PTHR22916 1 267 8.2E-54 T 22-04-2016 YE3078 d53261f16efd256789c0dabd33df807f 288 Gene3D G3DSA:3.90.550.10 7 213 6.5E-58 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YE3078 d53261f16efd256789c0dabd33df807f 288 Pfam PF00535 Glycosyl transferase family 2 8 155 5.1E-32 T 22-04-2016 IPR001173 Glycosyltransferase 2-like YE3078 d53261f16efd256789c0dabd33df807f 288 PANTHER PTHR22916:SF28 1 267 8.2E-54 T 22-04-2016 YE0957 7ba62db1b9056638315e5375a734624c 327 PANTHER PTHR33643 2 325 1.4E-81 T 22-04-2016 YE0957 7ba62db1b9056638315e5375a734624c 327 PANTHER PTHR33643:SF1 2 325 1.4E-81 T 22-04-2016 YE0957 7ba62db1b9056638315e5375a734624c 327 Pfam PF01774 UreD urease accessory protein 88 301 2.0E-40 T 22-04-2016 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 YE0957 7ba62db1b9056638315e5375a734624c 327 Hamap MF_01384 Urease accessory protein UreD [ureD]. 44 312 23.293 T 22-04-2016 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 YE1798 662ce6b133385b46ff803ca66931d436 118 Pfam PF10709 Protein of unknown function (DUF2511) 30 116 7.9E-43 T 22-04-2016 IPR019648 Protein of unknown function DUF2511 YE0298 7736e028659d26c5e7bd45e69f3c944f 234 Pfam PF04493 Endonuclease V 15 207 6.1E-74 T 22-04-2016 IPR007581 Endonuclease V GO:0004519|GO:0006281 YE0298 7736e028659d26c5e7bd45e69f3c944f 234 Hamap MF_00801 Endonuclease V [nfi]. 3 217 33.66 T 22-04-2016 IPR007581 Endonuclease V GO:0004519|GO:0006281 YE0298 7736e028659d26c5e7bd45e69f3c944f 234 PANTHER PTHR28511:SF1 5 227 1.6E-88 T 22-04-2016 YE0298 7736e028659d26c5e7bd45e69f3c944f 234 PANTHER PTHR28511 5 227 1.6E-88 T 22-04-2016 YE1291 02de6ba5f9732efeaa133fe6180b5638 100 PIRSF PIRSF000699 1 100 4.3E-35 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YE1291 02de6ba5f9732efeaa133fe6180b5638 100 PANTHER PTHR34382 1 100 1.2E-37 T 22-04-2016 YE1291 02de6ba5f9732efeaa133fe6180b5638 100 PANTHER PTHR34382:SF2 1 100 1.2E-37 T 22-04-2016 YE1291 02de6ba5f9732efeaa133fe6180b5638 100 Gene3D G3DSA:1.20.58.80 2 100 5.8E-39 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YE1291 02de6ba5f9732efeaa133fe6180b5638 100 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 7 99 2.2E-34 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YE1291 02de6ba5f9732efeaa133fe6180b5638 100 SUPERFAMILY SSF46973 1 100 6.15E-35 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- YE0450 dcb5ab695d72444ad81d5330e4a184df 331 SUPERFAMILY SSF51391 11 160 3.66E-5 T 22-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 YE0450 dcb5ab695d72444ad81d5330e4a184df 331 PANTHER PTHR30217 240 330 9.3E-227 T 22-04-2016 YE0450 dcb5ab695d72444ad81d5330e4a184df 331 PANTHER PTHR30217 1 218 9.3E-227 T 22-04-2016 YE0450 dcb5ab695d72444ad81d5330e4a184df 331 ProSitePatterns PS01276 Peptidase family U32 signature. 161 179 - T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- YE0450 dcb5ab695d72444ad81d5330e4a184df 331 Pfam PF01136 Peptidase family U32 76 330 7.9E-68 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- YE0450 dcb5ab695d72444ad81d5330e4a184df 331 PANTHER PTHR30217:SF3 240 330 9.3E-227 T 22-04-2016 YE0450 dcb5ab695d72444ad81d5330e4a184df 331 PANTHER PTHR30217:SF3 1 218 9.3E-227 T 22-04-2016 YE3298 ee5dacca21bddcf86061e995f6ee1e52 368 Pfam PF01728 FtsJ-like methyltransferase 187 263 8.2E-7 T 22-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 YE3298 ee5dacca21bddcf86061e995f6ee1e52 368 SUPERFAMILY SSF53335 185 296 2.63E-11 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE3298 ee5dacca21bddcf86061e995f6ee1e52 368 Gene3D G3DSA:3.40.50.150 185 317 1.2E-13 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE3298 ee5dacca21bddcf86061e995f6ee1e52 368 PANTHER PTHR37524:SF2 1 361 2.3E-229 T 22-04-2016 YE3298 ee5dacca21bddcf86061e995f6ee1e52 368 PIRSF PIRSF028774 2 361 1.8E-191 T 22-04-2016 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 YE3298 ee5dacca21bddcf86061e995f6ee1e52 368 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 2 356 85.053 T 22-04-2016 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 YE3298 ee5dacca21bddcf86061e995f6ee1e52 368 PANTHER PTHR37524 1 361 2.3E-229 T 22-04-2016 YE4083 19bd947064e2c402b5e666a2f42b3f37 535 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 79 101 - T 22-04-2016 IPR023765 Solute-binding protein family 5, conserved site YE4083 19bd947064e2c402b5e666a2f42b3f37 535 Gene3D G3DSA:3.90.76.10 39 219 6.3E-49 T 22-04-2016 YE4083 19bd947064e2c402b5e666a2f42b3f37 535 Gene3D G3DSA:3.10.105.10 288 504 2.3E-69 T 22-04-2016 YE4083 19bd947064e2c402b5e666a2f42b3f37 535 PANTHER PTHR30290 17 534 5.6E-232 T 22-04-2016 YE4083 19bd947064e2c402b5e666a2f42b3f37 535 PANTHER PTHR30290:SF14 17 534 5.6E-232 T 22-04-2016 YE4083 19bd947064e2c402b5e666a2f42b3f37 535 SUPERFAMILY SSF53850 29 534 6.33E-161 T 22-04-2016 YE4083 19bd947064e2c402b5e666a2f42b3f37 535 PIRSF PIRSF002741 22 534 3.2E-119 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 YE4083 19bd947064e2c402b5e666a2f42b3f37 535 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 73 453 1.1E-106 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain YE1958 24749ab47b2618df402466fd98564d7f 254 SUPERFAMILY SSF46894 147 213 8.16E-11 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YE1958 24749ab47b2618df402466fd98564d7f 254 Gene3D G3DSA:1.10.10.10 154 208 6.0E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE1958 24749ab47b2618df402466fd98564d7f 254 Pfam PF08448 PAS fold 22 129 6.6E-8 T 22-04-2016 IPR013656 PAS fold-4 YE1553 fd5afa0d089c81d7f095e396ce5c0dd2 261 Gene3D G3DSA:3.40.50.150 5 233 9.2E-31 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE1553 fd5afa0d089c81d7f095e396ce5c0dd2 261 SUPERFAMILY SSF53335 4 255 8.9E-37 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE1553 fd5afa0d089c81d7f095e396ce5c0dd2 261 PANTHER PTHR10108 1 222 1.7E-44 T 22-04-2016 YE1553 fd5afa0d089c81d7f095e396ce5c0dd2 261 Pfam PF13847 Methyltransferase domain 44 148 1.5E-19 T 22-04-2016 IPR025714 Methyltransferase domain YE1553 fd5afa0d089c81d7f095e396ce5c0dd2 261 PANTHER PTHR10108:SF919 1 222 1.7E-44 T 22-04-2016 YE0946 10e646f3cd43553f4c54f69e9a073031 527 Gene3D G3DSA:3.40.190.10 175 289 2.7E-25 T 22-04-2016 YE0946 10e646f3cd43553f4c54f69e9a073031 527 PANTHER PTHR30290:SF27 16 527 7.0E-236 T 22-04-2016 YE0946 10e646f3cd43553f4c54f69e9a073031 527 SUPERFAMILY SSF53850 27 507 5.79E-98 T 22-04-2016 YE0946 10e646f3cd43553f4c54f69e9a073031 527 PANTHER PTHR30290 16 527 7.0E-236 T 22-04-2016 YE0946 10e646f3cd43553f4c54f69e9a073031 527 Gene3D G3DSA:3.10.105.10 290 469 6.3E-40 T 22-04-2016 YE0946 10e646f3cd43553f4c54f69e9a073031 527 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 76 429 1.6E-81 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain YE0946 10e646f3cd43553f4c54f69e9a073031 527 PIRSF PIRSF002741 26 517 2.3E-77 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 YE0946 10e646f3cd43553f4c54f69e9a073031 527 Gene3D G3DSA:3.90.76.10 56 174 2.0E-29 T 22-04-2016 YE1605 20a49a98fd9fc45a78bbd4cd203e1370 517 Gene3D G3DSA:2.70.98.10 28 401 1.7E-174 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 YE1605 20a49a98fd9fc45a78bbd4cd203e1370 517 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 29 513 6.5E-197 T 22-04-2016 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 UniPathway: UPA00637 YE1605 20a49a98fd9fc45a78bbd4cd203e1370 517 SUPERFAMILY SSF81296 403 516 4.48E-33 T 22-04-2016 IPR014756 Immunoglobulin E-set YE1605 20a49a98fd9fc45a78bbd4cd203e1370 517 SUPERFAMILY SSF74650 29 400 7.53E-165 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 YE1605 20a49a98fd9fc45a78bbd4cd203e1370 517 PANTHER PTHR30504:SF4 6 517 0.0 T 22-04-2016 YE1605 20a49a98fd9fc45a78bbd4cd203e1370 517 PIRSF PIRSF006281 3 517 3.5E-240 T 22-04-2016 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D UniPathway: UPA00637 YE1605 20a49a98fd9fc45a78bbd4cd203e1370 517 PANTHER PTHR30504 6 517 0.0 T 22-04-2016 YE1605 20a49a98fd9fc45a78bbd4cd203e1370 517 Gene3D G3DSA:2.60.40.10 405 516 2.8E-40 T 22-04-2016 IPR013783 Immunoglobulin-like fold YE1605 20a49a98fd9fc45a78bbd4cd203e1370 517 Hamap MF_01069 Glucans biosynthesis protein G [mdoG]. 5 515 61.872 T 22-04-2016 IPR023704 Glucan biosynthesis protein G UniPathway: UPA00637 YE3669 e04aae643ad71d83476ab7e3e1529e28 217 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 17 208 2.5E-82 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 YE3669 e04aae643ad71d83476ab7e3e1529e28 217 PANTHER PTHR21327:SF15 1 215 2.5E-163 T 22-04-2016 YE3669 e04aae643ad71d83476ab7e3e1529e28 217 PANTHER PTHR21327 1 215 2.5E-163 T 22-04-2016 YE3669 e04aae643ad71d83476ab7e3e1529e28 217 SUPERFAMILY SSF55821 7 211 1.58E-85 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain YE3669 e04aae643ad71d83476ab7e3e1529e28 217 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 13 209 1.4E-80 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 YE3669 e04aae643ad71d83476ab7e3e1529e28 217 Gene3D G3DSA:3.90.870.10 11 215 3.2E-94 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain YE3669 e04aae643ad71d83476ab7e3e1529e28 217 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 11 213 42.368 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 YE0958 77b6fd89d8a7e9b7c41ba674f1d69dfc 329 PIRSF PIRSF016502 7 329 6.8E-104 T 22-04-2016 IPR004937 Urea transporter GO:0015204|GO:0016021|GO:0071918 Reactome: REACT_15518|Reactome: REACT_20679 YE0958 77b6fd89d8a7e9b7c41ba674f1d69dfc 329 Gene3D G3DSA:1.10.3430.10 11 324 9.2E-95 T 22-04-2016 IPR029020 Ammonium/urea transporter YE0958 77b6fd89d8a7e9b7c41ba674f1d69dfc 329 TIGRFAM TIGR03441 urea_trans_yut: urea transporter 21 318 3.3E-110 T 22-04-2016 IPR017807 Urea transporter, bacteria GO:0015204|GO:0016021|GO:0071918 YE0958 77b6fd89d8a7e9b7c41ba674f1d69dfc 329 PANTHER PTHR10464 1 329 1.6E-225 T 22-04-2016 IPR004937 Urea transporter GO:0015204|GO:0016021|GO:0071918 Reactome: REACT_15518|Reactome: REACT_20679 YE0958 77b6fd89d8a7e9b7c41ba674f1d69dfc 329 PANTHER PTHR10464:SF8 1 329 1.6E-225 T 22-04-2016 YE0958 77b6fd89d8a7e9b7c41ba674f1d69dfc 329 Pfam PF03253 Urea transporter 24 319 1.4E-91 T 22-04-2016 IPR004937 Urea transporter GO:0015204|GO:0016021|GO:0071918 Reactome: REACT_15518|Reactome: REACT_20679 YE1161 304dbc23bcf1b1fe857954348687e28c 191 Gene3D G3DSA:3.90.79.10 4 187 1.8E-59 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YE1161 304dbc23bcf1b1fe857954348687e28c 191 Pfam PF00293 NUDIX domain 45 169 4.9E-13 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 YE1161 304dbc23bcf1b1fe857954348687e28c 191 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 9 185 4.3E-55 T 22-04-2016 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 YE1161 304dbc23bcf1b1fe857954348687e28c 191 SUPERFAMILY SSF55811 9 189 1.49E-51 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 YE1161 304dbc23bcf1b1fe857954348687e28c 191 PANTHER PTHR11839 4 189 1.5E-44 T 22-04-2016 YE1347 f8c1003aa1bbc5217036d3af716c6bec 172 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 129 147 - T 22-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 YE1347 f8c1003aa1bbc5217036d3af716c6bec 172 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 30 171 2.8E-50 T 22-04-2016 YE1347 f8c1003aa1bbc5217036d3af716c6bec 172 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 28 171 7.7E-52 T 22-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 YE1347 f8c1003aa1bbc5217036d3af716c6bec 172 Gene3D G3DSA:3.40.30.10 92 170 2.9E-10 T 22-04-2016 IPR012336 Thioredoxin-like fold YE1347 f8c1003aa1bbc5217036d3af716c6bec 172 PANTHER PTHR10371 12 171 3.4E-119 T 22-04-2016 YE1347 f8c1003aa1bbc5217036d3af716c6bec 172 SUPERFAMILY SSF52833 21 171 1.07E-48 T 22-04-2016 IPR012336 Thioredoxin-like fold YE1347 f8c1003aa1bbc5217036d3af716c6bec 172 PIRSF PIRSF000216 4 172 3.9E-52 T 22-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 YE1347 f8c1003aa1bbc5217036d3af716c6bec 172 PANTHER PTHR10371:SF7 12 171 3.4E-119 T 22-04-2016 YE1283 db18e28953cf7d71c1ddb2dcc5a1d2d6 268 Pfam PF01925 Sulfite exporter TauE/SafE 14 248 6.4E-46 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 YE1283 db18e28953cf7d71c1ddb2dcc5a1d2d6 268 PANTHER PTHR30269 6 258 4.9E-116 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 YE1283 db18e28953cf7d71c1ddb2dcc5a1d2d6 268 PANTHER PTHR30269:SF0 6 258 4.9E-116 T 22-04-2016 YE0777 a97751f169681f89165ff1bb1dfabb3b 554 Pfam PF04932 O-Antigen ligase 212 352 3.5E-14 T 22-04-2016 IPR007016 O-antigen ligase-related YE0777 a97751f169681f89165ff1bb1dfabb3b 554 Pfam PF15864 Protein glycosylation ligase 172 197 6.9E-10 T 22-04-2016 IPR031726 Protein glycosylation ligase domain YE0777 a97751f169681f89165ff1bb1dfabb3b 554 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 373 552 2.2E-14 T 22-04-2016 IPR021797 Virulence factor membrane-bound polymerase, C-terminal YE2687 c8576515961948d9bed9b557ba151ab6 449 PANTHER PTHR35566 1 449 0.0 T 22-04-2016 YE2687 c8576515961948d9bed9b557ba151ab6 449 PANTHER PTHR35566:SF2 1 449 0.0 T 22-04-2016 YE2687 c8576515961948d9bed9b557ba151ab6 449 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 4 447 9.3E-138 T 22-04-2016 IPR010263 Type VI secretion protein, VC_A0114 YE2687 c8576515961948d9bed9b557ba151ab6 449 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 446 2.5E-139 T 22-04-2016 IPR010263 Type VI secretion protein, VC_A0114 YE1898 4938ad72ba4e2b40dfe0697c76f5af1c 294 SUPERFAMILY SSF81345 5 261 6.41E-39 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YE1898 4938ad72ba4e2b40dfe0697c76f5af1c 294 PANTHER PTHR30477 2 293 1.7E-150 T 22-04-2016 YE1898 4938ad72ba4e2b40dfe0697c76f5af1c 294 Pfam PF00950 ABC 3 transport family 10 265 2.8E-89 T 22-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 YE1898 4938ad72ba4e2b40dfe0697c76f5af1c 294 Gene3D G3DSA:1.10.3470.10 38 243 2.7E-9 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YE1898 4938ad72ba4e2b40dfe0697c76f5af1c 294 PANTHER PTHR30477:SF13 2 293 1.7E-150 T 22-04-2016 YE1123 606da4c99e5318e1167b3f102ee5fd38 96 PANTHER PTHR33609:SF1 10 95 4.6E-52 T 22-04-2016 YE1123 606da4c99e5318e1167b3f102ee5fd38 96 Pfam PF01527 Transposase 10 79 4.3E-21 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 YE1123 606da4c99e5318e1167b3f102ee5fd38 96 Gene3D G3DSA:1.10.10.60 21 92 6.1E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE1123 606da4c99e5318e1167b3f102ee5fd38 96 SUPERFAMILY SSF46689 9 81 2.15E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE1123 606da4c99e5318e1167b3f102ee5fd38 96 PANTHER PTHR33609 10 95 4.6E-52 T 22-04-2016 YE0070 05a9b7c1f91d3f6208cf67bd39156945 321 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 3 319 1.1E-125 T 22-04-2016 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 YE0070 05a9b7c1f91d3f6208cf67bd39156945 321 PANTHER PTHR30160 1 312 6.3E-165 T 22-04-2016 YE0070 05a9b7c1f91d3f6208cf67bd39156945 321 Gene3D G3DSA:3.40.50.2000 164 320 1.6E-38 T 22-04-2016 YE0070 05a9b7c1f91d3f6208cf67bd39156945 321 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 78 312 1.9E-71 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 YE0070 05a9b7c1f91d3f6208cf67bd39156945 321 SUPERFAMILY SSF53756 1 320 1.99E-76 T 22-04-2016 YE0070 05a9b7c1f91d3f6208cf67bd39156945 321 Gene3D G3DSA:3.40.50.2000 1 158 8.5E-29 T 22-04-2016 YE0070 05a9b7c1f91d3f6208cf67bd39156945 321 PANTHER PTHR30160:SF8 1 312 6.3E-165 T 22-04-2016 YE0870 54bb41741d4b4f9c962da4406a13f94e 217 Pfam PF05944 Phage small terminase subunit 38 109 4.2E-23 T 22-04-2016 IPR010270 Bacteriophage P2, GpM GO:0003677|GO:0004519|GO:0019069 YE2447 7ebf5f59af1211a082f8bcef278ef5db 196 Gene3D G3DSA:1.10.510.10 123 162 7.2E-5 T 22-04-2016 YE2447 7ebf5f59af1211a082f8bcef278ef5db 196 SUPERFAMILY SSF56112 29 164 6.2E-12 T 22-04-2016 IPR011009 Protein kinase-like domain YE0111 e030904df7a96ddbf9bde975853376ee 385 Gene3D G3DSA:3.90.1150.10 248 381 8.1E-50 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YE0111 e030904df7a96ddbf9bde975853376ee 385 PIRSF PIRSF001434 1 384 3.8E-133 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 YE0111 e030904df7a96ddbf9bde975853376ee 385 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 380 5.1E-140 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 YE0111 e030904df7a96ddbf9bde975853376ee 385 Gene3D G3DSA:3.40.640.10 5 246 6.7E-87 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YE0111 e030904df7a96ddbf9bde975853376ee 385 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 190 204 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 YE0111 e030904df7a96ddbf9bde975853376ee 385 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 3 381 1.4E-207 T 22-04-2016 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|UniPathway: UPA00051 YE0111 e030904df7a96ddbf9bde975853376ee 385 PANTHER PTHR11808 1 385 2.1E-183 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 YE0111 e030904df7a96ddbf9bde975853376ee 385 SUPERFAMILY SSF53383 5 381 3.66E-120 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YE0111 e030904df7a96ddbf9bde975853376ee 385 PANTHER PTHR11808:SF15 1 385 2.1E-183 T 22-04-2016 YE2875 bbbc2fd66683de12b54dfd9b1bf834cd 301 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 30 282 5.7E-77 T 22-04-2016 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 YE2875 bbbc2fd66683de12b54dfd9b1bf834cd 301 PANTHER PTHR30043 1 289 2.3E-181 T 22-04-2016 YE2875 bbbc2fd66683de12b54dfd9b1bf834cd 301 PANTHER PTHR30043:SF5 1 289 2.3E-181 T 22-04-2016 YE2875 bbbc2fd66683de12b54dfd9b1bf834cd 301 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 108 272 2.1E-7 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE2875 bbbc2fd66683de12b54dfd9b1bf834cd 301 Gene3D G3DSA:1.10.3720.10 85 282 2.7E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE2875 bbbc2fd66683de12b54dfd9b1bf834cd 301 SUPERFAMILY SSF161098 85 274 4.58E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE1575 2a6e68bbcda8adaad947a27d15f4e7da 183 SUPERFAMILY SSF159594 23 182 9.42E-29 T 22-04-2016 YE1575 2a6e68bbcda8adaad947a27d15f4e7da 183 Gene3D G3DSA:3.40.50.10610 14 180 1.4E-14 T 22-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component YE1575 2a6e68bbcda8adaad947a27d15f4e7da 183 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 25 179 1.4E-39 T 22-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component YE1261 cb149bca6a736c412d2fa1aee1eed86c 82 PANTHER PTHR30629 14 82 1.7E-25 T 22-04-2016 YE1261 cb149bca6a736c412d2fa1aee1eed86c 82 Pfam PF13356 Domain of unknown function (DUF4102) 20 82 6.2E-9 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 YE1261 cb149bca6a736c412d2fa1aee1eed86c 82 PANTHER PTHR30629:SF3 14 82 1.7E-25 T 22-04-2016 YE0903 6b1ebcea0a34174df466019c5867f87b 588 SUPERFAMILY SSF53448 10 243 1.69E-27 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YE0903 6b1ebcea0a34174df466019c5867f87b 588 PANTHER PTHR10859:SF84 9 296 6.8E-76 T 22-04-2016 YE0903 6b1ebcea0a34174df466019c5867f87b 588 PANTHER PTHR10859 9 296 6.8E-76 T 22-04-2016 YE0903 6b1ebcea0a34174df466019c5867f87b 588 Gene3D G3DSA:3.90.550.10 11 131 6.0E-10 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YE0903 6b1ebcea0a34174df466019c5867f87b 588 Pfam PF00535 Glycosyl transferase family 2 9 131 4.8E-14 T 22-04-2016 IPR001173 Glycosyltransferase 2-like YE2524 e14ff6d82fe783274feea481ee476e1c 466 Pfam PF07196 Flagellin hook IN motif 128 185 2.0E-12 T 22-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 YE2524 e14ff6d82fe783274feea481ee476e1c 466 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 225 455 3.0E-65 T 22-04-2016 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 YE2524 e14ff6d82fe783274feea481ee476e1c 466 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 11 106 1.1E-18 T 22-04-2016 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 YE2524 e14ff6d82fe783274feea481ee476e1c 466 PANTHER PTHR30288:SF0 2 466 2.0E-99 T 22-04-2016 YE2524 e14ff6d82fe783274feea481ee476e1c 466 PANTHER PTHR30288 2 466 2.0E-99 T 22-04-2016 YE3809 33e138e30eeeb7361db5cae6394bd6ed 199 PANTHER PTHR36964 1 197 8.4E-72 T 22-04-2016 YE3809 33e138e30eeeb7361db5cae6394bd6ed 199 Hamap MF_01207 Sulfoxide reductase heme-binding subunit YedZ [yedZ]. 1 199 23.407 T 22-04-2016 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 YE3809 33e138e30eeeb7361db5cae6394bd6ed 199 Pfam PF01794 Ferric reductase like transmembrane component 48 161 2.8E-15 T 22-04-2016 IPR013130 Ferric reductase transmembrane component-like domain YE1858 5e9ca812e9c5b12ae6a0b84dd1d80a5b 249 SUPERFAMILY SSF49354 23 155 2.88E-27 T 22-04-2016 IPR008962 PapD-like YE1858 5e9ca812e9c5b12ae6a0b84dd1d80a5b 249 Gene3D G3DSA:2.60.40.360 28 156 8.6E-22 T 22-04-2016 IPR008962 PapD-like YE1858 5e9ca812e9c5b12ae6a0b84dd1d80a5b 249 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 36 155 9.7E-20 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 YE1858 5e9ca812e9c5b12ae6a0b84dd1d80a5b 249 PANTHER PTHR30251 1 224 8.7E-87 T 22-04-2016 YE1858 5e9ca812e9c5b12ae6a0b84dd1d80a5b 249 PANTHER PTHR30251:SF4 1 224 8.7E-87 T 22-04-2016 YE0558 1b9006f238b3bf32a0051ccb81884f53 74 Pfam PF07256 Protein of unknown function (DUF1435) 1 74 3.9E-30 T 22-04-2016 IPR009885 Protein of unknown function DUF1435 YE0558 1b9006f238b3bf32a0051ccb81884f53 74 ProDom PD058594 MEMBRANE INNER C5447 MAJOR ECS5328 THE SUPERFAMILY PERMEASES STY4905 YJJZ 1 54 2.0E-21 T 22-04-2016 IPR009885 Protein of unknown function DUF1435 YE2256 5012d53081f9f636314c7f40fea47b4e 96 Pfam PF07383 Protein of unknown function (DUF1496) 36 94 1.4E-26 T 22-04-2016 IPR009971 Protein of unknown function DUF1496 YE3861 191ed7d21519c2955b0e359dbec46737 311 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 80 211 1.0E-52 T 22-04-2016 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 YE0219 ba71b0568de955f0ced4e07ff6f10dd7 208 Pfam PF07947 YhhN-like protein 26 206 4.3E-45 T 22-04-2016 IPR012506 YhhN-like GO:0016021 YE2273 a211a33bb8f5d4ab8d63c6f56bd2011c 425 PANTHER PTHR30510 1 425 9.0E-199 T 22-04-2016 YE2273 a211a33bb8f5d4ab8d63c6f56bd2011c 425 Pfam PF04285 Protein of unknown function (DUF444) 4 421 3.4E-188 T 22-04-2016 IPR006698 Uncharacterised protein family UPF0229 YE2273 a211a33bb8f5d4ab8d63c6f56bd2011c 425 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 423 42.021 T 22-04-2016 IPR006698 Uncharacterised protein family UPF0229 YE2137 7b82966974e9bb08316a0231f99fe4ac 202 PANTHER PTHR11260:SF154 1 200 2.8E-126 T 22-04-2016 YE2137 7b82966974e9bb08316a0231f99fe4ac 202 PANTHER PTHR11260 1 200 2.8E-126 T 22-04-2016 YE2137 7b82966974e9bb08316a0231f99fe4ac 202 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 74 5.4E-12 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 YE2137 7b82966974e9bb08316a0231f99fe4ac 202 Gene3D G3DSA:3.40.30.10 1 89 4.2E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold YE2137 7b82966974e9bb08316a0231f99fe4ac 202 Pfam PF00043 Glutathione S-transferase, C-terminal domain 101 189 1.9E-17 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal YE2137 7b82966974e9bb08316a0231f99fe4ac 202 Gene3D G3DSA:1.20.1050.10 90 188 9.4E-40 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like YE2137 7b82966974e9bb08316a0231f99fe4ac 202 SUPERFAMILY SSF52833 1 79 1.51E-19 T 22-04-2016 IPR012336 Thioredoxin-like fold YE2137 7b82966974e9bb08316a0231f99fe4ac 202 SUPERFAMILY SSF47616 84 199 1.1E-28 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like YE1973 8c6b498eef24a08c2b8bb77806e4bd39 246 SUPERFAMILY SSF51366 14 240 1.72E-80 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 YE1973 8c6b498eef24a08c2b8bb77806e4bd39 246 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 68 81 - T 22-04-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 YE1973 8c6b498eef24a08c2b8bb77806e4bd39 246 PANTHER PTHR32119 2 241 8.3E-129 T 22-04-2016 YE1973 8c6b498eef24a08c2b8bb77806e4bd39 246 SMART SM00934 16 237 3.4E-101 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 YE1973 8c6b498eef24a08c2b8bb77806e4bd39 246 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 18 237 6.6E-56 T 22-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 YE1973 8c6b498eef24a08c2b8bb77806e4bd39 246 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 14 242 39.632 T 22-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 YE1973 8c6b498eef24a08c2b8bb77806e4bd39 246 Gene3D G3DSA:3.20.20.70 14 240 7.3E-89 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YE1973 8c6b498eef24a08c2b8bb77806e4bd39 246 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 15 236 4.9E-56 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 YE1973 8c6b498eef24a08c2b8bb77806e4bd39 246 PANTHER PTHR32119:SF2 2 241 8.3E-129 T 22-04-2016 YE3973 8d6bafebb9e313df0538273493583a60 331 Gene3D G3DSA:3.30.70.1070 245 309 9.5E-4 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 YE3973 8d6bafebb9e313df0538273493583a60 331 Pfam PF05036 Sporulation related domain 247 320 1.8E-9 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 YE3973 8d6bafebb9e313df0538273493583a60 331 Hamap MF_02021 Cell division protein DamX [damX]. 1 331 26.053 T 22-04-2016 IPR032899 Cell division protein DamX GO:0030428|GO:0032506 YE1882 df5f3331ed6b5fad421e722abf9d4a8a 430 PANTHER PTHR30061:SF1 1 430 6.2E-82 T 22-04-2016 YE1882 df5f3331ed6b5fad421e722abf9d4a8a 430 Gene3D G3DSA:3.40.190.10 39 157 3.2E-16 T 22-04-2016 YE1882 df5f3331ed6b5fad421e722abf9d4a8a 430 Gene3D G3DSA:3.40.190.10 158 337 2.3E-20 T 22-04-2016 YE1882 df5f3331ed6b5fad421e722abf9d4a8a 430 SUPERFAMILY SSF53850 26 427 8.28E-62 T 22-04-2016 YE1882 df5f3331ed6b5fad421e722abf9d4a8a 430 Pfam PF01547 Bacterial extracellular solute-binding protein 47 333 1.4E-24 T 22-04-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 YE1882 df5f3331ed6b5fad421e722abf9d4a8a 430 PANTHER PTHR30061 1 430 6.2E-82 T 22-04-2016 YE4166 2f3b588ca47ce646f248de5496cbc795 433 Pfam PF07676 WD40-like Beta Propeller Repeat 406 428 0.19 T 22-04-2016 IPR011659 WD40-like Beta Propeller YE4166 2f3b588ca47ce646f248de5496cbc795 433 Pfam PF12566 Protein of unknown function (DUF3748) 73 193 1.7E-57 T 22-04-2016 IPR022223 Protein of unknown function DUF3748 YE4166 2f3b588ca47ce646f248de5496cbc795 433 SUPERFAMILY SSF82171 299 431 1.49E-20 T 22-04-2016 YE4166 2f3b588ca47ce646f248de5496cbc795 433 SUPERFAMILY SSF82171 28 159 1.49E-20 T 22-04-2016 YE4166 2f3b588ca47ce646f248de5496cbc795 433 SUPERFAMILY SSF82171 254 265 1.49E-20 T 22-04-2016 YE4166 2f3b588ca47ce646f248de5496cbc795 433 Gene3D G3DSA:2.120.10.30 280 422 1.0E-28 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like YE4166 2f3b588ca47ce646f248de5496cbc795 433 Gene3D G3DSA:2.120.10.30 7 159 1.0E-28 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like YE0607 2a8c78bc5ba4b01b9093b9e7ac8b1a96 816 SUPERFAMILY SSF55729 714 815 7.08E-7 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE0607 2a8c78bc5ba4b01b9093b9e7ac8b1a96 816 Pfam PF03995 Peptidase inhibitor family I36 22 80 9.2E-6 T 22-04-2016 YE0607 2a8c78bc5ba4b01b9093b9e7ac8b1a96 816 SUPERFAMILY SSF49695 100 204 6.75E-11 T 22-04-2016 IPR011024 Gamma-crystallin-related YE0607 2a8c78bc5ba4b01b9093b9e7ac8b1a96 816 SUPERFAMILY SSF49695 17 105 2.87E-13 T 22-04-2016 IPR011024 Gamma-crystallin-related YE0607 2a8c78bc5ba4b01b9093b9e7ac8b1a96 816 Gene3D G3DSA:3.40.630.30 713 815 8.7E-6 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE0607 2a8c78bc5ba4b01b9093b9e7ac8b1a96 816 SMART SM00247 25 107 0.0025 T 22-04-2016 IPR001064 Beta/gamma crystallin YE0607 2a8c78bc5ba4b01b9093b9e7ac8b1a96 816 Gene3D G3DSA:2.60.20.10 17 109 6.0E-25 T 22-04-2016 YE0607 2a8c78bc5ba4b01b9093b9e7ac8b1a96 816 Gene3D G3DSA:2.60.20.10 110 207 9.5E-19 T 22-04-2016 YE2704 f08f3ebbe7c3668bd6d65c1e76cbc496 161 Pfam PF08786 Domain of unknown function (DUF1795) 12 152 5.2E-27 T 22-04-2016 IPR014894 Protein DcrB YE2704 f08f3ebbe7c3668bd6d65c1e76cbc496 161 Gene3D G3DSA:3.40.1000.10 5 157 2.6E-35 T 22-04-2016 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich YE2704 f08f3ebbe7c3668bd6d65c1e76cbc496 161 SUPERFAMILY SSF55724 5 156 1.41E-30 T 22-04-2016 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich YE1408 0d8c29c10aa5cb7a3bdfdabce38bf986 80 PANTHER PTHR36572:SF1 2 79 1.7E-43 T 22-04-2016 YE1408 0d8c29c10aa5cb7a3bdfdabce38bf986 80 SUPERFAMILY SSF54857 1 78 8.63E-23 T 22-04-2016 IPR010391 DNA damage-inducible protein DinI-like YE1408 0d8c29c10aa5cb7a3bdfdabce38bf986 80 Gene3D G3DSA:3.30.910.10 1 78 5.5E-25 T 22-04-2016 IPR010391 DNA damage-inducible protein DinI-like YE1408 0d8c29c10aa5cb7a3bdfdabce38bf986 80 PANTHER PTHR36572 2 79 1.7E-43 T 22-04-2016 YE1408 0d8c29c10aa5cb7a3bdfdabce38bf986 80 Pfam PF06183 DinI-like family 17 76 3.1E-22 T 22-04-2016 IPR010391 DNA damage-inducible protein DinI-like YE2761 ec9183c8a954dcea5f5c7196fd5969ca 363 Pfam PF00465 Iron-containing alcohol dehydrogenase 12 350 4.8E-46 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 YE2761 ec9183c8a954dcea5f5c7196fd5969ca 363 SUPERFAMILY SSF56796 10 357 7.33E-61 T 22-04-2016 YE2761 ec9183c8a954dcea5f5c7196fd5969ca 363 PANTHER PTHR11496:SF55 1 363 1.3E-172 T 22-04-2016 YE2761 ec9183c8a954dcea5f5c7196fd5969ca 363 Gene3D G3DSA:1.20.1090.10 162 358 6.3E-49 T 22-04-2016 YE2761 ec9183c8a954dcea5f5c7196fd5969ca 363 Gene3D G3DSA:3.40.50.1970 5 160 1.2E-31 T 22-04-2016 YE2761 ec9183c8a954dcea5f5c7196fd5969ca 363 PIRSF PIRSF000112 2 362 7.0E-113 T 22-04-2016 YE2761 ec9183c8a954dcea5f5c7196fd5969ca 363 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 152 180 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 YE2761 ec9183c8a954dcea5f5c7196fd5969ca 363 PANTHER PTHR11496 1 363 1.3E-172 T 22-04-2016 YE3779 b2e30feeebd6275dfaa428f5bb088b32 246 Pfam PF07071 Protein of unknown function (DUF1341) 8 224 1.8E-113 T 22-04-2016 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 YE3779 b2e30feeebd6275dfaa428f5bb088b32 246 SUPERFAMILY SSF51569 89 213 6.35E-5 T 22-04-2016 YE3779 b2e30feeebd6275dfaa428f5bb088b32 246 TIGRFAM TIGR03581 EF_0839: conserved hypothetical protein EF_0839/AHA_3917 8 243 2.0E-124 T 22-04-2016 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 YE3840 f8406e89f867b60b140ea714a4110d7b 421 PANTHER PTHR11119 1 416 1.8E-276 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 YE3840 f8406e89f867b60b140ea714a4110d7b 421 Pfam PF00860 Permease family 1 381 5.0E-82 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 YE3840 f8406e89f867b60b140ea714a4110d7b 421 PANTHER PTHR11119:SF43 1 416 1.8E-276 T 22-04-2016 YE3551 68354e582da273ca233e5e941ebaf492 102 SUPERFAMILY SSF140129 27 94 7.72E-9 T 22-04-2016 YE1839 924a10fc104a723ba6b153bf556ebe4e 58 Pfam PF16080 Bacteriophage holin family HP1 4 58 7.3E-24 T 22-04-2016 IPR032118 Bacteriophage holin HP1 family YE3620 785c7e7e246e4323968c5891b5e4119f 347 PANTHER PTHR30472:SF24 15 347 3.1E-136 T 22-04-2016 YE3620 785c7e7e246e4323968c5891b5e4119f 347 Pfam PF01032 FecCD transport family 36 342 1.3E-80 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 YE3620 785c7e7e246e4323968c5891b5e4119f 347 Gene3D G3DSA:1.10.3470.10 23 346 2.5E-88 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YE3620 785c7e7e246e4323968c5891b5e4119f 347 SUPERFAMILY SSF81345 19 342 4.58E-69 T 22-04-2016 IPR029022 ABC transporter, BtuC-like YE3620 785c7e7e246e4323968c5891b5e4119f 347 PANTHER PTHR30472 15 347 3.1E-136 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 YE2880 74773ccdca2ab8cca681f356dcc5fa04 367 Pfam PF05076 Suppressor of fused protein (SUFU) 200 363 1.2E-20 T 22-04-2016 IPR020941 Suppressor of fused-like domain YE2115 e687dc6cce542f7a86aaf03f902a27af 148 TIGRFAM TIGR02293 TAS_TIGR02293: putative toxin-antitoxin system antitoxin component, TIGR02293 family 15 148 1.6E-56 T 22-04-2016 IPR011979 Conserved hypothetical protein CHP02293 YE2115 e687dc6cce542f7a86aaf03f902a27af 148 Pfam PF09722 Protein of unknown function (DUF2384) 94 145 3.9E-14 T 22-04-2016 IPR024467 Domain of unknown function DUF2384 YE2486 dfdb2a3f70a8da6ed27efd708f1eefc6 255 TIGRFAM TIGR03951 Fe_III_red_FhuF: siderophore-iron reductase FhuF 77 252 1.3E-63 T 22-04-2016 IPR008090 Ferric iron reductase YE2486 dfdb2a3f70a8da6ed27efd708f1eefc6 255 Pfam PF11575 FhuF 2Fe-2S C-terminal domain 231 251 1.1E-7 T 22-04-2016 IPR024726 Ferric iron reductase, C-terminal GO:0051537 YE2486 dfdb2a3f70a8da6ed27efd708f1eefc6 255 Pfam PF06276 Ferric iron reductase FhuF-like transporter 83 226 4.6E-27 T 22-04-2016 IPR022770 Ferric iron reductase FhuF domain YE2486 dfdb2a3f70a8da6ed27efd708f1eefc6 255 PRINTS PR01714 Ferric iron reductase signature 205 221 4.8E-32 T 22-04-2016 IPR008090 Ferric iron reductase YE2486 dfdb2a3f70a8da6ed27efd708f1eefc6 255 PRINTS PR01714 Ferric iron reductase signature 6 22 4.8E-32 T 22-04-2016 IPR008090 Ferric iron reductase YE2486 dfdb2a3f70a8da6ed27efd708f1eefc6 255 PRINTS PR01714 Ferric iron reductase signature 115 129 4.8E-32 T 22-04-2016 IPR008090 Ferric iron reductase YE2486 dfdb2a3f70a8da6ed27efd708f1eefc6 255 PRINTS PR01714 Ferric iron reductase signature 47 64 4.8E-32 T 22-04-2016 IPR008090 Ferric iron reductase YE2486 dfdb2a3f70a8da6ed27efd708f1eefc6 255 PRINTS PR01714 Ferric iron reductase signature 83 98 4.8E-32 T 22-04-2016 IPR008090 Ferric iron reductase YE2486 dfdb2a3f70a8da6ed27efd708f1eefc6 255 PRINTS PR01714 Ferric iron reductase signature 162 178 4.8E-32 T 22-04-2016 IPR008090 Ferric iron reductase YE2486 dfdb2a3f70a8da6ed27efd708f1eefc6 255 PRINTS PR01714 Ferric iron reductase signature 231 249 4.8E-32 T 22-04-2016 IPR008090 Ferric iron reductase YE4069 28ca8d151a6109eda0bb9281cbe7f97c 572 PIRSF PIRSF001432 1 565 1.5E-275 T 22-04-2016 IPR010702 Periplasmic pectate lyase GO:0016837|GO:0042597|GO:0045490 YE4069 28ca8d151a6109eda0bb9281cbe7f97c 572 Pfam PF06917 Periplasmic pectate lyase 19 572 0.0 T 22-04-2016 IPR010702 Periplasmic pectate lyase GO:0016837|GO:0042597|GO:0045490 YE0933 f214c1b1c1582dc0dc0989e5d0aa993c 132 Hamap MF_00546 Acid shock protein [asr]. 1 132 15.651 T 22-04-2016 IPR023497 Acid shock protein YE1402 c08082bd5b0259bf68152310dcd695e6 380 PANTHER PTHR22935:SF77 12 375 4.0E-76 T 22-04-2016 YE1402 c08082bd5b0259bf68152310dcd695e6 380 Pfam PF00144 Beta-lactamase 47 359 1.1E-61 T 22-04-2016 IPR001466 Beta-lactamase-related YE1402 c08082bd5b0259bf68152310dcd695e6 380 Gene3D G3DSA:3.40.710.10 35 371 8.2E-69 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YE1402 c08082bd5b0259bf68152310dcd695e6 380 PANTHER PTHR22935 12 375 4.0E-76 T 22-04-2016 YE1402 c08082bd5b0259bf68152310dcd695e6 380 SUPERFAMILY SSF56601 35 359 1.07E-67 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like YE2648 eeb06d18a700816998f8aca1b77059bc 322 PANTHER PTHR30201 1 300 2.6E-90 T 22-04-2016 YE2648 eeb06d18a700816998f8aca1b77059bc 322 TIGRFAM TIGR03125 citrate_citG: triphosphoribosyl-dephospho-CoA synthase CitG 17 291 2.3E-105 T 22-04-2016 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 YE2648 eeb06d18a700816998f8aca1b77059bc 322 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 20 290 1.6E-84 T 22-04-2016 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 YE2648 eeb06d18a700816998f8aca1b77059bc 322 Hamap MF_00397 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [citG]. 1 322 195.67 T 22-04-2016 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 YE1029 c11386d25ac7584ddd2c42b26f21f519 349 Pfam PF09925 Predicted membrane protein (DUF2157) 18 167 2.1E-6 T 22-04-2016 IPR018677 Domain of unknown function DUF2157 YE3686 6a3f20128d994dd414a10d5de646a162 361 Gene3D G3DSA:2.40.160.10 117 155 2.9E-4 T 22-04-2016 IPR023614 Porin domain YE3686 6a3f20128d994dd414a10d5de646a162 361 Gene3D G3DSA:2.40.160.10 227 254 2.9E-4 T 22-04-2016 IPR023614 Porin domain YE3686 6a3f20128d994dd414a10d5de646a162 361 Gene3D G3DSA:2.40.160.10 291 361 2.9E-4 T 22-04-2016 IPR023614 Porin domain YE3686 6a3f20128d994dd414a10d5de646a162 361 SUPERFAMILY SSF56935 121 361 1.89E-6 T 22-04-2016 YE0313 22a6b1a1ac377b03d468459a7c1a9778 281 Pfam PF04143 Sulphur transport 114 270 5.0E-26 T 22-04-2016 IPR007272 Sulphur transport domain YE0313 22a6b1a1ac377b03d468459a7c1a9778 281 Pfam PF04143 Sulphur transport 1 37 4.5E-9 T 22-04-2016 IPR007272 Sulphur transport domain YE0313 22a6b1a1ac377b03d468459a7c1a9778 281 PANTHER PTHR30574:SF6 1 221 7.3E-157 T 22-04-2016 YE0313 22a6b1a1ac377b03d468459a7c1a9778 281 PANTHER PTHR30574 1 221 7.3E-157 T 22-04-2016 YE2846 94f258607fc5b94354e0d33a0552cc78 218 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 216 3.5E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE2846 94f258607fc5b94354e0d33a0552cc78 218 SUPERFAMILY SSF161098 13 201 1.09E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE2846 94f258607fc5b94354e0d33a0552cc78 218 PANTHER PTHR30614 1 218 3.0E-173 T 22-04-2016 YE2846 94f258607fc5b94354e0d33a0552cc78 218 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 110 6.6E-30 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 YE2846 94f258607fc5b94354e0d33a0552cc78 218 Gene3D G3DSA:1.10.3720.10 14 216 8.0E-48 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE2846 94f258607fc5b94354e0d33a0552cc78 218 PANTHER PTHR30614:SF13 1 218 3.0E-173 T 22-04-2016 YE3581 105345d74e109d9176956484a3d44dfc 88 Pfam PF11903 ParD-like antitoxin of type II bacterial toxin-antitoxin system 6 67 9.9E-24 T 22-04-2016 IPR021831 ParD-like antitoxin of type II bacterial toxin-antitoxin system YE0087 b8a9394227f87216fa6276aa7086f076 154 Pfam PF07813 LTXXQ motif family protein 39 134 6.5E-21 T 22-04-2016 IPR012899 LTXXQ motif family protein GO:0042597 YE0087 b8a9394227f87216fa6276aa7086f076 154 PIRSF PIRSF034445 1 144 1.6E-32 T 22-04-2016 IPR012899 LTXXQ motif family protein GO:0042597 YE0087 b8a9394227f87216fa6276aa7086f076 154 PANTHER PTHR38102:SF2 1 154 3.8E-87 T 22-04-2016 YE0087 b8a9394227f87216fa6276aa7086f076 154 PANTHER PTHR38102 1 154 3.8E-87 T 22-04-2016 YE2790 9d2a7b82f4629720301a776277a1b879 135 Pfam PF03788 LrgA family 23 113 8.0E-30 T 22-04-2016 IPR005538 LrgA/CidA family GO:0016021 YE2790 9d2a7b82f4629720301a776277a1b879 135 PANTHER PTHR33931 1 135 1.0E-56 T 22-04-2016 YE2790 9d2a7b82f4629720301a776277a1b879 135 Hamap MF_01144 UPF0299 membrane protein YohJ [yohJ]. 4 123 23.794 T 22-04-2016 IPR022957 Uncharacterised protein family UPF0299 YE2790 9d2a7b82f4629720301a776277a1b879 135 PANTHER PTHR33931:SF2 1 135 1.0E-56 T 22-04-2016 YE1186 f747240c3e8604fa885d6612ce35b53d 203 Gene3D G3DSA:2.60.460.10 32 200 9.5E-78 T 22-04-2016 YE1186 f747240c3e8604fa885d6612ce35b53d 203 ProDom PD105195 LIPOPROTEIN YFEY MEMBRANE OUTER PRECURSOR SIGNAL ESCHERICHIA ECS3303 EXPORTED Y1456 24 199 3.0E-80 T 22-04-2016 IPR010938 Protein of unknown function DUF1131 YE1186 f747240c3e8604fa885d6612ce35b53d 203 Pfam PF06572 Protein of unknown function (DUF1131) 30 199 5.9E-82 T 22-04-2016 IPR010938 Protein of unknown function DUF1131 YE2667 05f9f26e769d790dc3e6c4797328ae9f 414 SUPERFAMILY SSF49401 236 344 6.96E-8 T 22-04-2016 IPR008966 Adhesion domain YE2667 05f9f26e769d790dc3e6c4797328ae9f 414 SUPERFAMILY SSF49401 379 411 6.96E-8 T 22-04-2016 IPR008966 Adhesion domain YE2667 05f9f26e769d790dc3e6c4797328ae9f 414 Pfam PF00419 Fimbrial protein 230 414 8.3E-33 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YE2667 05f9f26e769d790dc3e6c4797328ae9f 414 PIRSF PIRSF029766 2 414 1.5E-163 T 22-04-2016 IPR011228 Uncharacterised conserved protein UCP029766 YE0525 648c52b022999f0fc1b7fae25a566038 344 Pfam PF13407 Periplasmic binding protein domain 34 289 2.8E-54 T 22-04-2016 IPR025997 Periplasmic binding protein YE0525 648c52b022999f0fc1b7fae25a566038 344 SUPERFAMILY SSF53822 31 344 2.59E-83 T 22-04-2016 IPR028082 Periplasmic binding protein-like I YE0525 648c52b022999f0fc1b7fae25a566038 344 PANTHER PTHR32196 29 335 3.5E-160 T 22-04-2016 YE0525 648c52b022999f0fc1b7fae25a566038 344 PANTHER PTHR32196:SF1 29 335 3.5E-160 T 22-04-2016 IPR030159 Autoinducer 2-binding protein LsrB/rhamnose-binding protein RhaS GO:0043190 YE0525 648c52b022999f0fc1b7fae25a566038 344 Gene3D G3DSA:3.40.50.2300 154 301 4.8E-33 T 22-04-2016 YE0525 648c52b022999f0fc1b7fae25a566038 344 Gene3D G3DSA:3.40.50.2300 33 153 3.0E-30 T 22-04-2016 YE0358 011aba8c6be9305d1c64c7e1f38c0b39 43 Pfam PF08085 Entericidin EcnA/B family 22 42 8.5E-11 T 22-04-2016 IPR012556 Entericidin A/B GO:0009636|GO:0016020 YE0136 3b189ca6ce785d58c338b981899fe12a 120 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 1 100 3.0E-44 T 22-04-2016 IPR009867 Protein of unknown function DUF1422 YE0136 3b189ca6ce785d58c338b981899fe12a 120 Pfam PF07226 Protein of unknown function (DUF1422) 1 100 2.6E-44 T 22-04-2016 IPR009867 Protein of unknown function DUF1422 YE1235 f31135fe5ad92c721c2d77cf985c8d44 118 PIRSF PIRSF020555 1 118 1.9E-53 T 22-04-2016 IPR014508 Uncharacterised conserved protein withTPR-like repeats YE1235 f31135fe5ad92c721c2d77cf985c8d44 118 Pfam PF16068 Domain of unknown function (DUF4810) 26 109 7.5E-34 T 22-04-2016 IPR014508 Uncharacterised conserved protein withTPR-like repeats YE1662 764fc1b2f1f295a41c4b37c6ad9aa810 460 Pfam PF07484 Phage Tail Collar Domain 313 360 1.2E-9 T 22-04-2016 IPR011083 Phage tail collar domain YE1662 764fc1b2f1f295a41c4b37c6ad9aa810 460 Pfam PF12571 Phage tail-collar fibre protein 1 150 1.0E-58 T 22-04-2016 IPR022225 Phage tail fibre protein YE1662 764fc1b2f1f295a41c4b37c6ad9aa810 460 Gene3D G3DSA:3.90.1340.10 307 365 7.6E-10 T 22-04-2016 IPR011083 Phage tail collar domain YE1662 764fc1b2f1f295a41c4b37c6ad9aa810 460 PANTHER PTHR35191 1 164 4.9E-58 T 22-04-2016 YE1662 764fc1b2f1f295a41c4b37c6ad9aa810 460 SUPERFAMILY SSF88874 308 459 3.4E-35 T 22-04-2016 YE2143 b06cb3092aa35a9b6734a90097bc9929 155 PANTHER PTHR35603 1 155 1.5E-55 T 22-04-2016 YE2143 b06cb3092aa35a9b6734a90097bc9929 155 Pfam PF05433 Glycine zipper 2TM domain 62 102 1.3E-7 T 22-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 YE2183 4eaf073bd517e4211aff6f632b0fbf9d 499 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 22 469 1.3E-156 T 22-04-2016 IPR003846 Uncharacterised protein family UPF0061 YE2183 4eaf073bd517e4211aff6f632b0fbf9d 499 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 19 485 45.188 T 22-04-2016 IPR003846 Uncharacterised protein family UPF0061 YE2183 4eaf073bd517e4211aff6f632b0fbf9d 499 PANTHER PTHR32057 32 499 1.8E-198 T 22-04-2016 YE1301 7a7449587acadd16bdebeb97d04466ee 241 PANTHER PTHR13887:SF25 11 239 2.1E-61 T 22-04-2016 YE1301 7a7449587acadd16bdebeb97d04466ee 241 Pfam PF13462 Thioredoxin 79 233 1.9E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold YE1301 7a7449587acadd16bdebeb97d04466ee 241 SUPERFAMILY SSF52833 68 233 3.86E-39 T 22-04-2016 IPR012336 Thioredoxin-like fold YE1301 7a7449587acadd16bdebeb97d04466ee 241 PANTHER PTHR13887 11 239 2.1E-61 T 22-04-2016 YE1301 7a7449587acadd16bdebeb97d04466ee 241 Gene3D G3DSA:3.40.30.10 71 238 4.2E-39 T 22-04-2016 IPR012336 Thioredoxin-like fold YE1630 c6f8ea9ec24fbd9df2084dcb300e8472 176 Pfam PF02620 Uncharacterized ACR, COG1399 62 171 7.6E-17 T 22-04-2016 IPR003772 Protein of unknown function DUF177 YE1630 c6f8ea9ec24fbd9df2084dcb300e8472 176 PANTHER PTHR38099 2 173 2.7E-86 T 22-04-2016 YE3081 219bca8390306a2579fab781b52749d2 329 Pfam PF00535 Glycosyl transferase family 2 11 132 9.3E-18 T 22-04-2016 IPR001173 Glycosyltransferase 2-like YE3081 219bca8390306a2579fab781b52749d2 329 PANTHER PTHR22916 9 323 8.0E-19 T 22-04-2016 YE3081 219bca8390306a2579fab781b52749d2 329 Gene3D G3DSA:3.90.550.10 9 221 5.1E-28 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YE3081 219bca8390306a2579fab781b52749d2 329 SUPERFAMILY SSF53448 10 221 7.97E-30 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases YE0158 1b2e06fba2b3e896c3422469b1ff2411 455 PIRSF PIRSF029766 26 455 6.3E-171 T 22-04-2016 IPR011228 Uncharacterised conserved protein UCP029766 YE0158 1b2e06fba2b3e896c3422469b1ff2411 455 Gene3D G3DSA:2.60.40.1090 284 452 6.9E-10 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YE0158 1b2e06fba2b3e896c3422469b1ff2411 455 Pfam PF00419 Fimbrial protein 276 455 1.9E-27 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YE0158 1b2e06fba2b3e896c3422469b1ff2411 455 SUPERFAMILY SSF49401 285 453 5.97E-10 T 22-04-2016 IPR008966 Adhesion domain YE1670 3025acb79329620c1a40ad71c86ab12d 156 Pfam PF06891 P2 phage tail completion protein R (GpR) 1 129 3.2E-43 T 22-04-2016 IPR009678 Bacteriophage tail completion protein R YE4161 caf28788a1ca5999b9ff2edcaeb7e350 417 PANTHER PTHR11751 11 415 1.9E-185 T 22-04-2016 YE4161 caf28788a1ca5999b9ff2edcaeb7e350 417 Gene3D G3DSA:3.40.640.10 58 267 2.0E-38 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 YE4161 caf28788a1ca5999b9ff2edcaeb7e350 417 PANTHER PTHR11751:SF419 11 415 1.9E-185 T 22-04-2016 YE4161 caf28788a1ca5999b9ff2edcaeb7e350 417 Gene3D G3DSA:3.90.1150.10 268 407 1.2E-17 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 YE4161 caf28788a1ca5999b9ff2edcaeb7e350 417 SUPERFAMILY SSF53383 24 409 3.58E-61 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase YE4161 caf28788a1ca5999b9ff2edcaeb7e350 417 Pfam PF00155 Aminotransferase class I and II 66 391 2.1E-22 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 YE0722 9293804f748eaeeed3177d92a32eba0e 159 SUPERFAMILY SSF55083 1 157 3.53E-54 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 YE0722 9293804f748eaeeed3177d92a32eba0e 159 PANTHER PTHR20941 1 157 2.7E-75 T 22-04-2016 YE0722 9293804f748eaeeed3177d92a32eba0e 159 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 9.1E-46 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 YE0722 9293804f748eaeeed3177d92a32eba0e 159 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 YE0722 9293804f748eaeeed3177d92a32eba0e 159 Gene3D G3DSA:3.30.70.560 3 154 6.7E-58 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 YE0722 9293804f748eaeeed3177d92a32eba0e 159 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 7.1E-37 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 YE2089 f50b866a112ac37e398b957bab6dd1a3 104 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 8 96 2.0E-22 T 22-04-2016 IPR009241 Toxin HigB-like YE2457 92a00ae138ccc94dcfa90405f9130e95 219 SUPERFAMILY SSF50814 37 219 8.03E-70 T 22-04-2016 IPR011038 Calycin-like YE2457 92a00ae138ccc94dcfa90405f9130e95 219 Gene3D G3DSA:2.40.128.20 32 219 3.1E-80 T 22-04-2016 IPR012674 Calycin YE2457 92a00ae138ccc94dcfa90405f9130e95 219 Pfam PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment 41 219 9.2E-82 T 22-04-2016 IPR015304 ZinT domain GO:0008270 YE1791 1bee45b577bad60880772216e8272054 334 Pfam PF02371 Transposase IS116/IS110/IS902 family 210 288 7.2E-21 T 22-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 YE1791 1bee45b577bad60880772216e8272054 334 PANTHER PTHR33055 3 332 9.4E-125 T 22-04-2016 YE1791 1bee45b577bad60880772216e8272054 334 Pfam PF01548 Transposase 7 146 2.2E-18 T 22-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 YE1791 1bee45b577bad60880772216e8272054 334 PANTHER PTHR33055:SF2 3 332 9.4E-125 T 22-04-2016 YE1181 d67e6b4f0656f3963de22aa7be293042 89 Pfam PF01402 Ribbon-helix-helix protein, copG family 5 42 1.0E-6 T 22-04-2016 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 YE1181 d67e6b4f0656f3963de22aa7be293042 89 SUPERFAMILY SSF47598 3 44 7.12E-11 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 YE3730 8d6cb23747f576d66ac91e5e1f502edf 191 PANTHER PTHR34606 1 190 5.9E-94 T 22-04-2016 YE3730 8d6cb23747f576d66ac91e5e1f502edf 191 PANTHER PTHR34606:SF4 1 190 5.9E-94 T 22-04-2016 YE3730 8d6cb23747f576d66ac91e5e1f502edf 191 SMART SM00749 51 114 4.0E-8 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria YE3730 8d6cb23747f576d66ac91e5e1f502edf 191 SMART SM00749 129 190 0.0021 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria YE3730 8d6cb23747f576d66ac91e5e1f502edf 191 Pfam PF04972 BON domain 46 114 8.6E-14 T 22-04-2016 IPR007055 BON domain YE3730 8d6cb23747f576d66ac91e5e1f502edf 191 Pfam PF04972 BON domain 125 190 2.7E-17 T 22-04-2016 IPR007055 BON domain YE4044 2c8c211353540a91f46addd81342be56 457 Pfam PF07287 Protein of unknown function (DUF1446) 62 308 1.7E-19 T 22-04-2016 IPR010839 Protein of unknown function DUF1446 YE0923 2563e7245518c5cbfdc396d98c5f1b3e 334 Gene3D G3DSA:3.40.190.10 262 327 4.8E-55 T 22-04-2016 YE0923 2563e7245518c5cbfdc396d98c5f1b3e 334 Gene3D G3DSA:3.40.190.10 23 112 4.8E-55 T 22-04-2016 YE0923 2563e7245518c5cbfdc396d98c5f1b3e 334 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 31 311 1.9E-52 T 22-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 YE0923 2563e7245518c5cbfdc396d98c5f1b3e 334 SUPERFAMILY SSF53850 24 324 9.77E-94 T 22-04-2016 YE0923 2563e7245518c5cbfdc396d98c5f1b3e 334 Gene3D G3DSA:3.40.190.100 114 261 4.8E-56 T 22-04-2016 YE2476 15de4d2f132dbd753cece8d38f6523ba 278 PANTHER PTHR30157:SF1 2 269 1.3E-67 T 22-04-2016 YE2476 15de4d2f132dbd753cece8d38f6523ba 278 Pfam PF04954 Siderophore-interacting protein 145 259 1.9E-33 T 22-04-2016 IPR007037 Siderophore-interacting protein YE2476 15de4d2f132dbd753cece8d38f6523ba 278 Pfam PF08021 Siderophore-interacting FAD-binding domain 21 136 5.5E-36 T 22-04-2016 IPR013113 FAD-binding 9, siderophore-interacting YE2476 15de4d2f132dbd753cece8d38f6523ba 278 PANTHER PTHR30157 2 269 1.3E-67 T 22-04-2016 YE2476 15de4d2f132dbd753cece8d38f6523ba 278 SUPERFAMILY SSF63380 7 141 4.2E-14 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 YE2476 15de4d2f132dbd753cece8d38f6523ba 278 Gene3D G3DSA:2.40.30.10 13 135 7.3E-30 T 22-04-2016 YE2476 15de4d2f132dbd753cece8d38f6523ba 278 Gene3D G3DSA:3.40.50.80 140 276 4.1E-41 T 22-04-2016 YE3486 2b9fb3b6b82f2bf9494e9dd87ef7343f 217 Pfam PF11444 Protein of unknown function (DUF2895) 6 203 3.1E-85 T 22-04-2016 IPR021548 Protein of unknown function DUF2895 YE3486 2b9fb3b6b82f2bf9494e9dd87ef7343f 217 TIGRFAM TIGR03746 conj_TIGR03746: integrating conjugative element protein, PFL_4703 family 4 204 1.2E-96 T 22-04-2016 IPR021548 Protein of unknown function DUF2895 YE0052 173b12a14d10d3bc615989cba9bb4a11 297 PANTHER PTHR11941 53 218 2.4E-18 T 22-04-2016 YE0052 173b12a14d10d3bc615989cba9bb4a11 297 PANTHER PTHR11941 255 264 2.4E-18 T 22-04-2016 YE0052 173b12a14d10d3bc615989cba9bb4a11 297 Gene3D G3DSA:3.90.226.10 40 230 3.1E-31 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YE0052 173b12a14d10d3bc615989cba9bb4a11 297 Pfam PF00378 Enoyl-CoA hydratase/isomerase 79 216 1.0E-15 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 YE0052 173b12a14d10d3bc615989cba9bb4a11 297 SUPERFAMILY SSF52096 36 264 5.97E-32 T 22-04-2016 IPR029045 ClpP/crotonase-like domain YE1481 c6837ab7e4a0d270529a167f5906e548 102 Pfam PF07214 Protein of unknown function (DUF1418) 1 96 2.7E-40 T 22-04-2016 IPR010815 Protein of unknown function DUF1418 YE2258 31ceed43631fd3263a1be10dcd09a313 348 Pfam PF00586 AIR synthase related protein, N-terminal domain 50 157 2.4E-18 T 22-04-2016 IPR016188 PurM-like, N-terminal domain YE2258 31ceed43631fd3263a1be10dcd09a313 348 TIGRFAM TIGR00476 selD: selenide, water dikinase 7 313 3.3E-137 T 22-04-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 YE2258 31ceed43631fd3263a1be10dcd09a313 348 Hamap MF_00625 Selenide, water dikinase [selD]. 5 347 45.585 T 22-04-2016 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 YE2258 31ceed43631fd3263a1be10dcd09a313 348 Pfam PF02769 AIR synthase related protein, C-terminal domain 169 335 5.3E-28 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain YE2258 31ceed43631fd3263a1be10dcd09a313 348 SUPERFAMILY SSF56042 164 334 5.38E-50 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain YE2258 31ceed43631fd3263a1be10dcd09a313 348 SUPERFAMILY SSF55326 7 160 1.64E-40 T 22-04-2016 YE2258 31ceed43631fd3263a1be10dcd09a313 348 Gene3D G3DSA:3.30.1330.10 28 162 8.5E-32 T 22-04-2016 IPR016188 PurM-like, N-terminal domain YE2258 31ceed43631fd3263a1be10dcd09a313 348 PIRSF PIRSF036407 1 347 1.7E-119 T 22-04-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 YE2258 31ceed43631fd3263a1be10dcd09a313 348 PANTHER PTHR10256 3 346 5.2E-166 T 22-04-2016 YE2258 31ceed43631fd3263a1be10dcd09a313 348 Gene3D G3DSA:3.90.650.10 176 343 4.2E-17 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain YE3778 b57cee88c94773db12a6229e32686fbe 407 PANTHER PTHR30344:SF1 19 407 7.1E-109 T 22-04-2016 YE3778 b57cee88c94773db12a6229e32686fbe 407 PANTHER PTHR30344 19 407 7.1E-109 T 22-04-2016 YE3778 b57cee88c94773db12a6229e32686fbe 407 SUPERFAMILY SSF51004 36 402 2.09E-46 T 22-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain YE3778 b57cee88c94773db12a6229e32686fbe 407 Pfam PF10282 Lactonase, 7-bladed beta-propeller 40 400 5.2E-114 T 22-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 YE3778 b57cee88c94773db12a6229e32686fbe 407 Gene3D G3DSA:2.130.10.10 38 402 1.3E-104 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 YE1005 a1f7cf99068a9f7f8b2a32e66a9dc0ef 324 SUPERFAMILY SSF53474 89 233 6.08E-18 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE1005 a1f7cf99068a9f7f8b2a32e66a9dc0ef 324 PANTHER PTHR35243 111 316 1.1E-43 T 22-04-2016 YE1005 a1f7cf99068a9f7f8b2a32e66a9dc0ef 324 Pfam PF11187 Protein of unknown function (DUF2974) 134 212 1.9E-5 T 22-04-2016 IPR024499 Protein of unknown function DUF2974 YE1005 a1f7cf99068a9f7f8b2a32e66a9dc0ef 324 Gene3D G3DSA:3.40.50.1820 117 284 3.1E-12 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE1005 a1f7cf99068a9f7f8b2a32e66a9dc0ef 324 PANTHER PTHR35243:SF2 111 316 1.1E-43 T 22-04-2016 YE3294 de071d12b93e647d56f535730153b8c0 183 Hamap MF_01104 Protein Syd [syd]. 3 181 36.122 T 22-04-2016 IPR009948 Syd GO:0009898 YE3294 de071d12b93e647d56f535730153b8c0 183 Pfam PF07348 Syd protein (SUKH-2) 7 179 1.2E-70 T 22-04-2016 IPR009948 Syd GO:0009898 YE2913A f38be37a289140fdde637865e36dec2f 46 Hamap MF_01484 Multidrug efflux pump accessory protein AcrZ [acrZ]. 1 46 18.592 T 22-04-2016 IPR019702 Multidrug efflux pump accessory protein AcrZ GO:0005886|GO:0006855|GO:0015238 YE2913A f38be37a289140fdde637865e36dec2f 46 Pfam PF10766 Multidrug efflux pump-associated protein AcrZ 1 45 5.2E-28 T 22-04-2016 IPR019702 Multidrug efflux pump accessory protein AcrZ GO:0005886|GO:0006855|GO:0015238 YE1804 4690099c4cfa2da93f66e6a52a637d3b 335 Pfam PF03237 Terminase-like family 2 316 5.9E-71 T 22-04-2016 IPR004921 Terminase, large subunit YE3468 a3ac054ce9d96c19412a4b2549c7a29a 117 TIGRFAM TIGR03757 conj_TIGR03757: integrating conjugative element protein, PFL_4709 family 20 113 6.2E-31 T 22-04-2016 IPR011090 Integrating conjugative element protein, PFL4709 YE3468 a3ac054ce9d96c19412a4b2549c7a29a 117 Pfam PF07511 Protein of unknown function (DUF1525) 35 114 1.8E-25 T 22-04-2016 IPR011090 Integrating conjugative element protein, PFL4709 YE2201 ca0aee302155d51ddae57faf587da0f3 83 Pfam PF10692 Protein of unknown function (DUF2498) 5 81 2.4E-44 T 22-04-2016 IPR019633 Protein of unknown function DUF2498 YE0123 d542bd0fbf25bdcae12940b4c6f1d12c 211 Gene3D G3DSA:3.30.1500.10 10 189 4.4E-69 T 22-04-2016 IPR010495 Haem-binding HasA YE0123 d542bd0fbf25bdcae12940b4c6f1d12c 211 SUPERFAMILY SSF54621 11 184 6.15E-39 T 22-04-2016 IPR010495 Haem-binding HasA YE0123 d542bd0fbf25bdcae12940b4c6f1d12c 211 Pfam PF06438 Heme-binding protein A (HasA) 10 211 4.5E-73 T 22-04-2016 IPR010495 Haem-binding HasA YE3389 d4a6f7736c9253e2f73557f492457389 200 SUPERFAMILY SSF109604 12 190 1.16E-44 T 22-04-2016 YE3389 d4a6f7736c9253e2f73557f492457389 200 PANTHER PTHR11845 15 148 1.4E-24 T 22-04-2016 YE3389 d4a6f7736c9253e2f73557f492457389 200 Pfam PF13023 HD domain 21 183 1.1E-49 T 22-04-2016 IPR006674 HD domain YE3389 d4a6f7736c9253e2f73557f492457389 200 Gene3D G3DSA:1.10.3210.10 11 187 8.3E-39 T 22-04-2016 IPR006674 HD domain YE0299 c6e3053b38961219d451985429a4d0ec 196 Pfam PF04222 Protein of unknown function (DUF416) 5 193 1.1E-77 T 22-04-2016 IPR007338 Protein of unknown function DUF416 YE0299 c6e3053b38961219d451985429a4d0ec 196 Gene3D G3DSA:1.20.1590.10 1 194 1.0E-87 T 22-04-2016 IPR023381 YP001051499.1-like domain YE1073 d1cf0241a174efd5a4a07cceda3a7a4e 374 PIRSF PIRSF004640 1 364 3.5E-146 T 22-04-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 YE1073 d1cf0241a174efd5a4a07cceda3a7a4e 374 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 359 34.23 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 YE1073 d1cf0241a174efd5a4a07cceda3a7a4e 374 PANTHER PTHR30454 1 372 2.8E-223 T 22-04-2016 YE1073 d1cf0241a174efd5a4a07cceda3a7a4e 374 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 352 4.1E-124 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 YE1073 d1cf0241a174efd5a4a07cceda3a7a4e 374 SUPERFAMILY SSF51717 16 208 4.71E-10 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 YE1073 d1cf0241a174efd5a4a07cceda3a7a4e 374 Gene3D G3DSA:3.20.20.70 30 132 2.4E-9 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YE1073 d1cf0241a174efd5a4a07cceda3a7a4e 374 SUPERFAMILY SSF56014 265 354 4.8E-11 T 22-04-2016 YE1073 d1cf0241a174efd5a4a07cceda3a7a4e 374 Pfam PF04551 GcpE protein 14 354 2.3E-130 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 YE1857 ebccf3d82656f18a016d03c8233e008d 813 PANTHER PTHR30451:SF5 1 813 0.0 T 22-04-2016 YE1857 ebccf3d82656f18a016d03c8233e008d 813 PANTHER PTHR30451 1 813 0.0 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YE1857 ebccf3d82656f18a016d03c8233e008d 813 Pfam PF13953 PapC C-terminal domain 737 799 3.3E-11 T 22-04-2016 IPR025949 PapC-like, C-terminal domain YE1857 ebccf3d82656f18a016d03c8233e008d 813 Pfam PF00577 Outer membrane usher protein 232 708 5.4E-30 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 YE3553 282040f8f828dcfe017c0c64a59faec1 247 TIGRFAM TIGR02544 III_secr_YscJ: type III secretion apparatus lipoprotein, YscJ/HrcJ family 5 193 2.7E-67 T 22-04-2016 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 YE3553 282040f8f828dcfe017c0c64a59faec1 247 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 97 112 2.7E-12 T 22-04-2016 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 YE3553 282040f8f828dcfe017c0c64a59faec1 247 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 117 130 2.7E-12 T 22-04-2016 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 YE3553 282040f8f828dcfe017c0c64a59faec1 247 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 25 35 2.7E-12 T 22-04-2016 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 YE3553 282040f8f828dcfe017c0c64a59faec1 247 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 77 90 2.7E-12 T 22-04-2016 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 YE3553 282040f8f828dcfe017c0c64a59faec1 247 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 164 176 2.7E-12 T 22-04-2016 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 YE3553 282040f8f828dcfe017c0c64a59faec1 247 PANTHER PTHR30046 7 187 3.0E-36 T 22-04-2016 YE3553 282040f8f828dcfe017c0c64a59faec1 247 Pfam PF01514 Secretory protein of YscJ/FliF family 8 185 5.9E-17 T 22-04-2016 IPR006182 Secretory protein YscJ/FliF YE1098 138c62861aa317148ba959fbfb960c8e 182 PANTHER PTHR40399 3 182 9.6E-98 T 22-04-2016 YE1098 138c62861aa317148ba959fbfb960c8e 182 Pfam PF03608 PTS system enzyme II sorbitol-specific factor 5 170 5.0E-77 T 22-04-2016 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 YE1098 138c62861aa317148ba959fbfb960c8e 182 TIGRFAM TIGR00821 EII-GUT: PTS system, glucitol/sorbitol-specific, IIC component 1 180 1.1E-108 T 22-04-2016 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 YE1098 138c62861aa317148ba959fbfb960c8e 182 PIRSF PIRSF038321 2 182 2.5E-88 T 22-04-2016 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 YE0963 71b5f323a0163c4ad5c316dd610bab59 134 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 5 122 17.46 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 YE0963 71b5f323a0163c4ad5c316dd610bab59 134 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 7 117 9.7E-19 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 YE0963 71b5f323a0163c4ad5c316dd610bab59 134 PANTHER PTHR28259 5 132 1.5E-39 T 22-04-2016 YE3053 39a3d1d47afc1a9d0a56b8048c39c726 808 Pfam PF02687 FtsX-like permease family 247 364 3.4E-8 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 YE3053 39a3d1d47afc1a9d0a56b8048c39c726 808 Pfam PF02687 FtsX-like permease family 689 798 4.4E-16 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 YE3053 39a3d1d47afc1a9d0a56b8048c39c726 808 PANTHER PTHR30287 1 799 7.5E-172 T 22-04-2016 YE2014 3a0f726100aa028ac916fdf098fb09d4 524 Pfam PF06097 Bacterial protein of unknown function (DUF945) 1 474 6.8E-144 T 22-04-2016 IPR010352 Protein of unknown function DUF945 YE0934 d131e823b790eafc91c39003a3871ec9 367 PANTHER PTHR10272 240 317 1.3E-20 T 22-04-2016 IPR005065 Platelet-activating factor acetylhydrolase GO:0003847|GO:0016042 KEGG: 00565+3.1.1.47 YE0934 d131e823b790eafc91c39003a3871ec9 367 PANTHER PTHR10272 89 196 1.3E-20 T 22-04-2016 IPR005065 Platelet-activating factor acetylhydrolase GO:0003847|GO:0016042 KEGG: 00565+3.1.1.47 YE0934 d131e823b790eafc91c39003a3871ec9 367 PIRSF PIRSF031982 24 365 1.0E-65 T 22-04-2016 IPR016986 Uncharacterised conserved protein UCP031982, alpha/beta hydrolase, XabL YE0934 d131e823b790eafc91c39003a3871ec9 367 Gene3D G3DSA:3.40.50.1820 32 199 1.7E-40 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE0934 d131e823b790eafc91c39003a3871ec9 367 Gene3D G3DSA:3.40.50.1820 243 356 1.7E-40 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE0934 d131e823b790eafc91c39003a3871ec9 367 Pfam PF03403 Platelet-activating factor acetylhydrolase, isoform II 173 286 5.6E-5 T 22-04-2016 IPR005065 Platelet-activating factor acetylhydrolase GO:0003847|GO:0016042 KEGG: 00565+3.1.1.47 YE0934 d131e823b790eafc91c39003a3871ec9 367 SUPERFAMILY SSF53474 243 330 1.16E-23 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE0934 d131e823b790eafc91c39003a3871ec9 367 SUPERFAMILY SSF53474 30 199 1.16E-23 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold YE1805 efae53320a790f7575ec9f3a394aa834 333 PIRSF PIRSF018494 1 331 4.6E-148 T 22-04-2016 IPR030935 Phage portal protein PBSX family, Proteobacteria YE1805 efae53320a790f7575ec9f3a394aa834 333 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 50 324 1.4E-82 T 22-04-2016 IPR006430 Phage portal protein PBSX family YE1805 efae53320a790f7575ec9f3a394aa834 333 Pfam PF04860 Phage portal protein 92 319 1.7E-13 T 22-04-2016 IPR006944 Bacteriophage/Gene transfer agent portal protein YE0867 661d326e9a3b80fd7ea4a3e7049eddfe 725 Pfam PF06056 Putative ATPase subunit of terminase (gpP-like) 14 66 7.6E-14 T 22-04-2016 IPR010332 ATPase terminase subunit, putative GO:0005524|GO:0019069 YE0867 661d326e9a3b80fd7ea4a3e7049eddfe 725 Pfam PF03237 Terminase-like family 184 598 6.8E-77 T 22-04-2016 IPR004921 Terminase, large subunit YE2986 ab33c17e4e3e1e651855a7831205a928 363 SUPERFAMILY SSF52540 129 310 2.82E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2986 ab33c17e4e3e1e651855a7831205a928 363 Gene3D G3DSA:3.40.50.300 130 333 1.7E-88 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase YE2986 ab33c17e4e3e1e651855a7831205a928 363 PANTHER PTHR30473 1 356 6.0E-215 T 22-04-2016 YE2986 ab33c17e4e3e1e651855a7831205a928 363 Pfam PF02562 PhoH-like protein 130 333 5.7E-94 T 22-04-2016 IPR003714 PhoH-like protein GO:0005524 YE2986 ab33c17e4e3e1e651855a7831205a928 363 PANTHER PTHR30473:SF1 1 356 6.0E-215 T 22-04-2016 YE2730 a4afb0fe7a3f6295ac4a28e241460c4c 554 Pfam PF02286 Dehydratase large subunit 1 551 0.0 T 22-04-2016 IPR003206 Diol/glycerol dehydratase, large subunit GO:0008152|GO:0016836|GO:0031419|GO:0050215 YE2730 a4afb0fe7a3f6295ac4a28e241460c4c 554 Gene3D G3DSA:3.20.20.350 1 553 0.0 T 22-04-2016 IPR003206 Diol/glycerol dehydratase, large subunit GO:0008152|GO:0016836|GO:0031419|GO:0050215 YE2730 a4afb0fe7a3f6295ac4a28e241460c4c 554 SUPERFAMILY SSF51703 1 553 1.14E-289 T 22-04-2016 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 YE2730 a4afb0fe7a3f6295ac4a28e241460c4c 554 PIRSF PIRSF018507 1 554 0.0 T 22-04-2016 IPR003206 Diol/glycerol dehydratase, large subunit GO:0008152|GO:0016836|GO:0031419|GO:0050215 YE2730 a4afb0fe7a3f6295ac4a28e241460c4c 554 ProDom PD025428 SUBUNIT GLYCEROL DEHYDRATASE LARGE LYASE DHAB ALPHA DIOL B12-DEPENDENT METABOLISM 8 549 0.0 T 22-04-2016 IPR003206 Diol/glycerol dehydratase, large subunit GO:0008152|GO:0016836|GO:0031419|GO:0050215 YE2091 3a7d63693a91b4f7111952e17afc2ad9 413 Pfam PF05785 Rho-activating domain of cytotoxic necrotizing factor 132 396 3.9E-44 T 22-04-2016 IPR008430 Cytotoxic necrotizing factor, Rho-activating domain YE2091 3a7d63693a91b4f7111952e17afc2ad9 413 Gene3D G3DSA:3.60.100.10 126 400 4.2E-92 T 22-04-2016 IPR008430 Cytotoxic necrotizing factor, Rho-activating domain YE2091 3a7d63693a91b4f7111952e17afc2ad9 413 SUPERFAMILY SSF64438 131 397 1.37E-58 T 22-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic YE4021 38f35afcc415bc0ff459f2f80a203bee 438 Pfam PF02447 GntP family permease 1 437 5.7E-186 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 YE4021 38f35afcc415bc0ff459f2f80a203bee 438 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 1 438 9.1E-200 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 YE4021 38f35afcc415bc0ff459f2f80a203bee 438 PANTHER PTHR30354:SF4 1 438 0.0 T 22-04-2016 YE4021 38f35afcc415bc0ff459f2f80a203bee 438 PIRSF PIRSF002746 1 438 2.4E-162 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 YE4021 38f35afcc415bc0ff459f2f80a203bee 438 PANTHER PTHR30354 1 438 0.0 T 22-04-2016 YE4045 3f076cf71f8fc1a2f4a3095b3bf20d04 105 Pfam PF14330 Domain of unknown function (DUF4387) 6 102 1.0E-37 T 22-04-2016 IPR025496 Protein of unknown function DUF4387 YE2263 5cfcec4ce7c6c7d690d800fef5241fc3 90 Pfam PF07023 Protein of unknown function (DUF1315) 5 81 1.5E-26 T 22-04-2016 IPR009749 Protein of unknown function DUF1315 YE1837 8ebc3e3f98a6daf95fd69b7a4c07bc9c 139 Pfam PF06530 Phage antitermination protein Q 16 138 4.5E-44 T 22-04-2016 IPR010534 Bacteriophage 933W, GpQ GO:0003677|GO:0060567 YE2181 bcf188e2f0d91fa2e065788246c63838 353 Pfam PF05171 Haemin-degrading HemS.ChuX domain 206 345 5.0E-34 T 22-04-2016 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 YE2181 bcf188e2f0d91fa2e065788246c63838 353 Pfam PF05171 Haemin-degrading HemS.ChuX domain 29 157 1.0E-31 T 22-04-2016 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 YE2181 bcf188e2f0d91fa2e065788246c63838 353 SUPERFAMILY SSF144064 5 346 1.67E-116 T 22-04-2016 YE2181 bcf188e2f0d91fa2e065788246c63838 353 Gene3D G3DSA:3.40.1570.10 188 345 1.4E-6 T 22-04-2016 YE2844 de451be87df95d6e65b5dceeab4ac112 88 PANTHER PTHR38777:SF1 2 88 5.6E-25 T 22-04-2016 YE2844 de451be87df95d6e65b5dceeab4ac112 88 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 36 68 3.3E-11 T 22-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 YE2844 de451be87df95d6e65b5dceeab4ac112 88 SUPERFAMILY SSF57716 38 73 1.57E-5 T 22-04-2016 YE2844 de451be87df95d6e65b5dceeab4ac112 88 PANTHER PTHR38777 2 88 5.6E-25 T 22-04-2016 YE2520 a18fad844189a906feb2d1809cacc8c9 401 ProDom PD035357 TRANSFERASE 2.1.1.- LYSINE METHYLTRANSFERASE N-METHYLTRANSFERASE FLAGELLUM LYSINE-N-METHYLASE BIOSYNTHETIC FLAGELLIN N-METHYLATION 241 400 3.0E-23 T 22-04-2016 IPR020193 Flagellin lysine-N-methylase, C-terminal YE1221 9e0f36f6b74fada54dee84fa6b72dab2 329 Gene3D G3DSA:3.20.20.100 12 327 3.5E-83 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YE1221 9e0f36f6b74fada54dee84fa6b72dab2 329 PANTHER PTHR11732:SF191 13 328 2.7E-183 T 22-04-2016 YE1221 9e0f36f6b74fada54dee84fa6b72dab2 329 SUPERFAMILY SSF51430 13 327 4.32E-86 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YE1221 9e0f36f6b74fada54dee84fa6b72dab2 329 PANTHER PTHR11732 13 328 2.7E-183 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta YE1221 9e0f36f6b74fada54dee84fa6b72dab2 329 Pfam PF00248 Aldo/keto reductase family 28 327 2.9E-65 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain YE2025a be8fd1ed68ebc72701691c313abe1c3d 81 ProDom PD336997 PRECURSOR SIGNAL MEMBRANE OUTER YNFD ESCHERICHIA EXPORTED PP0087 COLI PP0090 3 76 7.0E-26 T 22-04-2016 IPR010595 Protein of unknown function DUF1161 YE2025a be8fd1ed68ebc72701691c313abe1c3d 81 Pfam PF06649 Protein of unknown function (DUF1161) 23 76 7.1E-27 T 22-04-2016 IPR010595 Protein of unknown function DUF1161 YE0240 0701b4ea26b0c2fc1908d54ccb7eaca5 158 Pfam PF04449 CS1 type fimbrial major subunit 24 154 9.6E-18 T 22-04-2016 IPR007540 Fimbrial major subunit, CS1-type GO:0009289 YE2050 47268c8d23d32b72393e708d396a797a 237 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 206 218 2.6E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE2050 47268c8d23d32b72393e708d396a797a 237 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 190 2.6E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE2050 47268c8d23d32b72393e708d396a797a 237 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 190 206 2.6E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE2050 47268c8d23d32b72393e708d396a797a 237 Pfam PF00196 Bacterial regulatory proteins, luxR family 176 228 1.0E-16 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE2050 47268c8d23d32b72393e708d396a797a 237 SMART SM00421 173 230 2.2E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE2050 47268c8d23d32b72393e708d396a797a 237 Gene3D G3DSA:1.10.10.10 175 231 2.7E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE2050 47268c8d23d32b72393e708d396a797a 237 SUPERFAMILY SSF46894 170 232 1.84E-15 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YE0875 2ffbbeeca134de29de576bbaeae259e4 106 Pfam PF04550 Phage holin family 2 3 91 2.2E-32 T 22-04-2016 IPR007633 Bacteriophage P2, GpY, holin YE0875 2ffbbeeca134de29de576bbaeae259e4 106 ProDom PD064783 PHAGE HOLIN LYSIS P2 MEMBRANE GPY Y TRANSMEMBRANE HOMOLOG INNER 14 93 3.0E-10 T 22-04-2016 IPR007633 Bacteriophage P2, GpY, holin YE3221 ee2d6e68248c5c3e1b99e2612e56cb00 249 SUPERFAMILY SSF141523 37 155 1.44E-9 T 22-04-2016 YE3221 ee2d6e68248c5c3e1b99e2612e56cb00 249 Pfam PF03734 L,D-transpeptidase catalytic domain 40 155 5.9E-8 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 YE3221 ee2d6e68248c5c3e1b99e2612e56cb00 249 PANTHER PTHR36699 3 241 2.0E-72 T 22-04-2016 YE3794 0e3efa708e485e73f4de654a6ca679b7 651 PANTHER PTHR30509 303 636 0.0 T 22-04-2016 YE3794 0e3efa708e485e73f4de654a6ca679b7 651 PANTHER PTHR30509 1 253 0.0 T 22-04-2016 YE3794 0e3efa708e485e73f4de654a6ca679b7 651 Hamap MF_01545 p-hydroxybenzoic acid efflux pump subunit AaeB [aaeB]. 1 651 56.431 T 22-04-2016 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB GO:0005886|GO:0006810 YE3794 0e3efa708e485e73f4de654a6ca679b7 651 PANTHER PTHR30509:SF10 303 636 0.0 T 22-04-2016 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB GO:0005886|GO:0006810 YE3794 0e3efa708e485e73f4de654a6ca679b7 651 PANTHER PTHR30509:SF10 1 253 0.0 T 22-04-2016 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB GO:0005886|GO:0006810 YE3794 0e3efa708e485e73f4de654a6ca679b7 651 Pfam PF04632 Fusaric acid resistance protein family 8 649 3.2E-170 T 22-04-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 YE3032 7e4685acfce8bc9ffba8936c6b7d6715 108 Gene3D G3DSA:3.30.70.900 12 105 1.6E-24 T 22-04-2016 YE3032 7e4685acfce8bc9ffba8936c6b7d6715 108 TIGRFAM TIGR02118 TIGR02118: conserved hypothetical protein 7 107 2.4E-28 T 22-04-2016 IPR009799 EthD domain YE3032 7e4685acfce8bc9ffba8936c6b7d6715 108 Pfam PF07110 EthD domain 19 96 4.3E-14 T 22-04-2016 IPR009799 EthD domain YE3032 7e4685acfce8bc9ffba8936c6b7d6715 108 SUPERFAMILY SSF54909 7 104 1.99E-27 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel YE2683a 35c359781c10f36eeeafbe5218243e2a 86 Pfam PF05488 PAAR motif 47 86 1.2E-6 T 22-04-2016 IPR008727 PAAR motif YE2683a 35c359781c10f36eeeafbe5218243e2a 86 Pfam PF05488 PAAR motif 8 75 3.0E-10 T 22-04-2016 IPR008727 PAAR motif YE0545 445499eec1adef4cc0a256294395005e 500 Gene3D G3DSA:3.50.50.60 380 393 1.0E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE0545 445499eec1adef4cc0a256294395005e 500 Gene3D G3DSA:3.50.50.60 20 282 1.0E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE0545 445499eec1adef4cc0a256294395005e 500 Gene3D G3DSA:3.50.50.60 439 497 1.0E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE0545 445499eec1adef4cc0a256294395005e 500 SUPERFAMILY SSF51905 17 295 3.25E-21 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE0545 445499eec1adef4cc0a256294395005e 500 SUPERFAMILY SSF51905 448 497 3.25E-21 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 YE0295 8364dceea58cfb905e90939f53a2a166 167 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 1 149 5.8E-58 T 22-04-2016 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 YE0295 8364dceea58cfb905e90939f53a2a166 167 PIRSF PIRSF016548 1 160 2.3E-53 T 22-04-2016 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 YE0295 8364dceea58cfb905e90939f53a2a166 167 Hamap MF_01181 Regulator of sigma D [rsd]. 1 153 40.925 T 22-04-2016 IPR023785 Regulator of RNA polymerase sigma(70) subunit, Rsd YE1679 9d29ca8eee5b6bc92903bd2384c5de66 346 Pfam PF04860 Phage portal protein 90 329 6.3E-13 T 22-04-2016 IPR006944 Bacteriophage/Gene transfer agent portal protein YE1679 9d29ca8eee5b6bc92903bd2384c5de66 346 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 54 330 2.9E-76 T 22-04-2016 IPR006430 Phage portal protein PBSX family YE1679 9d29ca8eee5b6bc92903bd2384c5de66 346 PIRSF PIRSF018494 3 346 5.2E-153 T 22-04-2016 IPR030935 Phage portal protein PBSX family, Proteobacteria YE0518 e95c016de2f56cd49b4b6f76aaf43e6a 435 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 17 398 6.7E-18 T 22-04-2016 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 YE0518 e95c016de2f56cd49b4b6f76aaf43e6a 435 PANTHER PTHR30569 1 424 2.4E-69 T 22-04-2016 IPR030191 Cytosine permease GO:0015209|GO:0016021 YE0231 deff0c70bc6d92f148c1f539561c6b06 308 PANTHER PTHR11795 7 308 1.3E-147 T 22-04-2016 YE0231 deff0c70bc6d92f148c1f539561c6b06 308 PANTHER PTHR11795:SF371 7 308 1.3E-147 T 22-04-2016 YE0231 deff0c70bc6d92f148c1f539561c6b06 308 Pfam PF02653 Branched-chain amino acid transport system / permease component 12 292 5.3E-63 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YE0964 7b1930331406a6b6bb70373c58c47b07 126 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 7 121 4.5E-20 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 YE0964 7b1930331406a6b6bb70373c58c47b07 126 PANTHER PTHR28259 1 126 5.1E-37 T 22-04-2016 YE0964 7b1930331406a6b6bb70373c58c47b07 126 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 6 126 18.358 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 YE3567 f81113c98a8b3b4a60f183f8977f353c 405 PANTHER PTHR30012 2 405 6.0E-181 T 22-04-2016 YE3567 f81113c98a8b3b4a60f183f8977f353c 405 PANTHER PTHR30012:SF6 2 405 6.0E-181 T 22-04-2016 YE3567 f81113c98a8b3b4a60f183f8977f353c 405 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 166 194 - T 22-04-2016 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 YE3567 f81113c98a8b3b4a60f183f8977f353c 405 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 403 9.9E-141 T 22-04-2016 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 YE3567 f81113c98a8b3b4a60f183f8977f353c 405 Pfam PF00482 Type II secretion system (T2SS), protein F 72 194 1.7E-28 T 22-04-2016 IPR018076 Type II secretion system F domain YE3567 f81113c98a8b3b4a60f183f8977f353c 405 Pfam PF00482 Type II secretion system (T2SS), protein F 275 395 1.1E-22 T 22-04-2016 IPR018076 Type II secretion system F domain YE3567 f81113c98a8b3b4a60f183f8977f353c 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 9.6E-41 T 22-04-2016 IPR003004 GspF/PilC family YE3567 f81113c98a8b3b4a60f183f8977f353c 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 9.6E-41 T 22-04-2016 IPR003004 GspF/PilC family YE3567 f81113c98a8b3b4a60f183f8977f353c 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 9.6E-41 T 22-04-2016 IPR003004 GspF/PilC family YE3567 f81113c98a8b3b4a60f183f8977f353c 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 9.6E-41 T 22-04-2016 IPR003004 GspF/PilC family YE3218 a1939be47980e47e8ed83158f8cccf93 266 SMART SM00900 151 249 3.2E-34 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 YE3218 a1939be47980e47e8ed83158f8cccf93 266 Pfam PF04205 FMN-binding domain 151 246 1.1E-15 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 YE3218 a1939be47980e47e8ed83158f8cccf93 266 PANTHER PTHR37838 2 266 1.2E-115 T 22-04-2016 YE3218 a1939be47980e47e8ed83158f8cccf93 266 PANTHER PTHR37838:SF1 2 266 1.2E-115 T 22-04-2016 YE3218 a1939be47980e47e8ed83158f8cccf93 266 PIRSF PIRSF009437 2 264 3.0E-102 T 22-04-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 YE3218 a1939be47980e47e8ed83158f8cccf93 266 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 10 261 36.457 T 22-04-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 YE3218 a1939be47980e47e8ed83158f8cccf93 266 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 9 257 2.3E-101 T 22-04-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 YE0910 e815fb71a3b164050ec5e27c3ce302a7 243 TIGRFAM TIGR01831 fabG_rel: putative 3-oxoacyl-(acyl-carrier-protein) reductase 5 243 3.8E-127 T 22-04-2016 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 YE0910 e815fb71a3b164050ec5e27c3ce302a7 243 SUPERFAMILY SSF51735 3 242 1.2E-71 T 22-04-2016 IPR016040 NAD(P)-binding domain YE0910 e815fb71a3b164050ec5e27c3ce302a7 243 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 242 8.8E-56 T 22-04-2016 YE0910 e815fb71a3b164050ec5e27c3ce302a7 243 PANTHER PTHR24322:SF635 153 185 3.2E-47 T 22-04-2016 YE0910 e815fb71a3b164050ec5e27c3ce302a7 243 PANTHER PTHR24322:SF635 7 137 3.2E-47 T 22-04-2016 YE0910 e815fb71a3b164050ec5e27c3ce302a7 243 Gene3D G3DSA:3.40.50.720 3 242 6.1E-72 T 22-04-2016 IPR016040 NAD(P)-binding domain YE0910 e815fb71a3b164050ec5e27c3ce302a7 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.5E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE0910 e815fb71a3b164050ec5e27c3ce302a7 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.5E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE0910 e815fb71a3b164050ec5e27c3ce302a7 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.5E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE0910 e815fb71a3b164050ec5e27c3ce302a7 243 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 189 2.0E-4 T 22-04-2016 YE0910 e815fb71a3b164050ec5e27c3ce302a7 243 PANTHER PTHR24322 153 185 3.2E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE0910 e815fb71a3b164050ec5e27c3ce302a7 243 PANTHER PTHR24322 7 137 3.2E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE0910 e815fb71a3b164050ec5e27c3ce302a7 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 3.9E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE0910 e815fb71a3b164050ec5e27c3ce302a7 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 3.9E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE0910 e815fb71a3b164050ec5e27c3ce302a7 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 3.9E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE0910 e815fb71a3b164050ec5e27c3ce302a7 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.9E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE0910 e815fb71a3b164050ec5e27c3ce302a7 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 3.9E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE0910 e815fb71a3b164050ec5e27c3ce302a7 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 3.9E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR YE2922 06f57d8802f32dbe72ab3c5a778ffb41 559 PANTHER PTHR10795 315 331 4.4E-29 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related YE2922 06f57d8802f32dbe72ab3c5a778ffb41 559 PANTHER PTHR10795 4 291 4.4E-29 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related YE2922 06f57d8802f32dbe72ab3c5a778ffb41 559 SUPERFAMILY SSF52743 15 268 2.09E-49 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 YE2922 06f57d8802f32dbe72ab3c5a778ffb41 559 Gene3D G3DSA:3.40.50.200 12 268 1.3E-47 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 YE2922 06f57d8802f32dbe72ab3c5a778ffb41 559 Pfam PF00082 Subtilase family 27 264 1.9E-26 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 YE2922 06f57d8802f32dbe72ab3c5a778ffb41 559 PRINTS PR00723 Subtilisin serine protease family (S8) signature 60 73 8.9E-10 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related YE2922 06f57d8802f32dbe72ab3c5a778ffb41 559 PRINTS PR00723 Subtilisin serine protease family (S8) signature 221 237 8.9E-10 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related YE2922 06f57d8802f32dbe72ab3c5a778ffb41 559 PRINTS PR00723 Subtilisin serine protease family (S8) signature 27 46 8.9E-10 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related YE2922 06f57d8802f32dbe72ab3c5a778ffb41 559 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 64 74 - T 22-04-2016 IPR022398 Peptidase S8, subtilisin, His-active site YE2922 06f57d8802f32dbe72ab3c5a778ffb41 559 PANTHER PTHR10795:SF419 315 331 4.4E-29 T 22-04-2016 YE2922 06f57d8802f32dbe72ab3c5a778ffb41 559 PANTHER PTHR10795:SF419 4 291 4.4E-29 T 22-04-2016 YE3315 b0f7ddf7491329861c4fcf5c1e620f95 183 PIRSF PIRSF004525 1 183 1.3E-63 T 22-04-2016 IPR016419 Prepilin peptidase-dependent protein B, predicted YE0759 b0fa166f084abb6e89c12b26a4089992 66 SUPERFAMILY SSF54786 1 64 1.8E-11 T 22-04-2016 YE0759 b0fa166f084abb6e89c12b26a4089992 66 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 5 63 1.8E-12 T 22-04-2016 IPR012933 HicA mRNA interferase family GO:0003729 YE0759 b0fa166f084abb6e89c12b26a4089992 66 Gene3D G3DSA:3.30.920.30 1 64 3.4E-12 T 22-04-2016 YE1287 9c75f88b1cbddefbfaaf5771fd9c595e 407 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site YE1287 9c75f88b1cbddefbfaaf5771fd9c595e 407 Gene3D G3DSA:3.40.47.10 264 406 1.8E-51 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YE1287 9c75f88b1cbddefbfaaf5771fd9c595e 407 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 362 3.1E-30 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal YE1287 9c75f88b1cbddefbfaaf5771fd9c595e 407 Gene3D G3DSA:3.40.47.10 6 260 6.8E-56 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YE1287 9c75f88b1cbddefbfaaf5771fd9c595e 407 PANTHER PTHR11712 1 405 1.8E-168 T 22-04-2016 YE1287 9c75f88b1cbddefbfaaf5771fd9c595e 407 SUPERFAMILY SSF53901 216 405 9.05E-62 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YE1287 9c75f88b1cbddefbfaaf5771fd9c595e 407 SUPERFAMILY SSF53901 1 254 1.21E-61 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 YE1287 9c75f88b1cbddefbfaaf5771fd9c595e 407 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 247 2.5E-41 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal YE1287 9c75f88b1cbddefbfaaf5771fd9c595e 407 SMART SM00825 Beta-ketoacyl synthase 4 407 5.6E-13 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YE2598 9458d45d5896320567a3d5b1bcad2169 275 Pfam PF11004 3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase 3 274 2.2E-113 T 22-04-2016 IPR021266 Kdo hydroxylase YE0449 3410c65cb4a7a64d3a5cc65cba66dc0b 292 Pfam PF01136 Peptidase family U32 92 202 3.0E-11 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- YE0449 3410c65cb4a7a64d3a5cc65cba66dc0b 292 PANTHER PTHR30217 1 292 1.1E-212 T 22-04-2016 YE0449 3410c65cb4a7a64d3a5cc65cba66dc0b 292 PANTHER PTHR30217:SF8 1 292 1.1E-212 T 22-04-2016 YE2522 b25b1160848828832614e74a2d87e29e 366 SUPERFAMILY SSF64518 1 366 3.27E-97 T 22-04-2016 YE2522 b25b1160848828832614e74a2d87e29e 366 Gene3D G3DSA:1.20.1330.10 53 173 4.1E-50 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YE2522 b25b1160848828832614e74a2d87e29e 366 Gene3D G3DSA:1.20.1330.10 268 322 4.1E-50 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YE2522 b25b1160848828832614e74a2d87e29e 366 PANTHER PTHR30244 2 219 1.3E-119 T 22-04-2016 YE2522 b25b1160848828832614e74a2d87e29e 366 PANTHER PTHR30244 276 366 1.3E-119 T 22-04-2016 YE2522 b25b1160848828832614e74a2d87e29e 366 Pfam PF00700 Bacterial flagellin C-terminal helical region 281 365 2.8E-30 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YE2522 b25b1160848828832614e74a2d87e29e 366 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 139 3.7E-42 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YE2522 b25b1160848828832614e74a2d87e29e 366 PRINTS PR00207 Flagellin signature 110 133 4.8E-30 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 YE2522 b25b1160848828832614e74a2d87e29e 366 PRINTS PR00207 Flagellin signature 75 94 4.8E-30 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 YE2522 b25b1160848828832614e74a2d87e29e 366 PRINTS PR00207 Flagellin signature 36 53 4.8E-30 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 YE2522 b25b1160848828832614e74a2d87e29e 366 PANTHER PTHR30244:SF1 2 219 1.3E-119 T 22-04-2016 YE2522 b25b1160848828832614e74a2d87e29e 366 PANTHER PTHR30244:SF1 276 366 1.3E-119 T 22-04-2016 YE2152 59e0d42bcef787e123033bc1bd1a201f 365 SUPERFAMILY SSF51395 3 363 3.97E-127 T 22-04-2016 YE2152 59e0d42bcef787e123033bc1bd1a201f 365 Gene3D G3DSA:3.20.20.70 4 364 9.9E-140 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YE2152 59e0d42bcef787e123033bc1bd1a201f 365 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 344 6.3E-96 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 YE2152 59e0d42bcef787e123033bc1bd1a201f 365 PANTHER PTHR22893:SF14 1 363 3.2E-180 T 22-04-2016 YE2152 59e0d42bcef787e123033bc1bd1a201f 365 PANTHER PTHR22893 1 363 3.2E-180 T 22-04-2016 YE1573 d8c85503f8746deba434630c808648e5 405 PANTHER PTHR30462 1 405 3.6E-268 T 22-04-2016 YE1573 d8c85503f8746deba434630c808648e5 405 Pfam PF04403 Paraquat-inducible protein A 33 183 2.6E-40 T 22-04-2016 IPR007498 Paraquat-inducible protein A YE1573 d8c85503f8746deba434630c808648e5 405 Pfam PF04403 Paraquat-inducible protein A 236 392 6.0E-54 T 22-04-2016 IPR007498 Paraquat-inducible protein A YE1573 d8c85503f8746deba434630c808648e5 405 PANTHER PTHR30462:SF3 1 405 3.6E-268 T 22-04-2016 YE1573 d8c85503f8746deba434630c808648e5 405 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 1 391 2.0E-153 T 22-04-2016 IPR005219 Conserved hypothetical protein CHP00155 YE2312 256b44f73fce9cd9f7b7f4516fedeb3e 113 Pfam PF05939 Phage minor tail protein 4 111 4.8E-32 T 22-04-2016 IPR010265 Bacteriophage lambda, GpM, minor tail YE3459 9a1dbaf01683045eacd9c1720e6444e8 95 Pfam PF06755 CbtA_toxin of type IV toxin-antitoxin system 7 79 1.4E-15 T 22-04-2016 IPR009610 CbtA toxin of type IV toxin-antitoxin system YE1797 2452c55db1fd79887733c94d45ec8552 294 PANTHER PTHR34820:SF2 1 294 3.3E-73 T 22-04-2016 YE1797 2452c55db1fd79887733c94d45ec8552 294 Pfam PF05425 Copper resistance protein D 189 287 6.9E-15 T 22-04-2016 IPR008457 Copper resistance protein D GO:0016021 YE1797 2452c55db1fd79887733c94d45ec8552 294 PANTHER PTHR34820 1 294 3.3E-73 T 22-04-2016 YE3465 00f8da053333a03e1d4500a6d22a6544 506 Pfam PF07916 TraG-like protein, N-terminal region 8 476 9.3E-77 T 22-04-2016 IPR012931 TraG-like, N-terminal YE1229 3a096a86e09dd22bdbc80af7e48f90de 415 Gene3D G3DSA:2.60.120.330 2 414 2.8E-156 T 22-04-2016 IPR027443 Isopenicillin N synthase-like YE1229 3a096a86e09dd22bdbc80af7e48f90de 415 Pfam PF07350 Protein of unknown function (DUF1479) 8 413 9.5E-147 T 22-04-2016 IPR010856 Protein of unknown function DUF1479 YE1229 3a096a86e09dd22bdbc80af7e48f90de 415 PANTHER PTHR30613:SF4 2 413 5.1E-288 T 22-04-2016 YE1229 3a096a86e09dd22bdbc80af7e48f90de 415 PANTHER PTHR30613 2 413 5.1E-288 T 22-04-2016 YE1229 3a096a86e09dd22bdbc80af7e48f90de 415 SUPERFAMILY SSF51197 2 413 2.11E-155 T 22-04-2016 YE0716 69aad0b7b80e51cda2ab1c75ebf2ff88 256 PANTHER PTHR30413:SF2 3 255 2.6E-165 T 22-04-2016 YE0716 69aad0b7b80e51cda2ab1c75ebf2ff88 256 PANTHER PTHR30413 3 255 2.6E-165 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 YE0716 69aad0b7b80e51cda2ab1c75ebf2ff88 256 PIRSF PIRSF006648 7 253 1.8E-24 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 YE0716 69aad0b7b80e51cda2ab1c75ebf2ff88 256 Pfam PF01061 ABC-2 type transporter 9 218 1.1E-36 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 YE0716 69aad0b7b80e51cda2ab1c75ebf2ff88 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 2.2E-5 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 YE0716 69aad0b7b80e51cda2ab1c75ebf2ff88 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 2.2E-5 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 YE0716 69aad0b7b80e51cda2ab1c75ebf2ff88 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 2.2E-5 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 YE2376 86cb5f44e27f270df176e58ebf2da783 183 PANTHER PTHR37530 4 183 8.8E-66 T 22-04-2016 YE2376 86cb5f44e27f270df176e58ebf2da783 183 PIRSF PIRSF004982 3 179 1.2E-49 T 22-04-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 YE2376 86cb5f44e27f270df176e58ebf2da783 183 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 9 178 9.8E-64 T 22-04-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 YE2376 86cb5f44e27f270df176e58ebf2da783 183 Pfam PF03843 Outer membrane lipoprotein Slp family 12 159 3.0E-48 T 22-04-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 YE1606a da239f51f57340f0a91337b03aef0fdc 86 Pfam PF07119 Protein of unknown function (DUF1375) 21 80 2.5E-7 T 22-04-2016 IPR010780 Protein of unknown function DUF1375 YE0406 6edefcd88a25eca05dd992c6733d685e 1259 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 923 1259 4.0E-65 T 22-04-2016 IPR007452 Translocation and assembly module TamB YE0406 6edefcd88a25eca05dd992c6733d685e 1259 PANTHER PTHR36985 1 1259 0.0 T 22-04-2016 YE0185 f06b153aa5452c444039d706e17890af 374 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 32 362 1.6E-144 T 22-04-2016 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX YE0185 f06b153aa5452c444039d706e17890af 374 PANTHER PTHR38043 1 374 3.2E-116 T 22-04-2016 YE0192 9252474103317e518cb5f920488c8c3f 274 SUPERFAMILY SSF54506 2 273 3.77E-53 T 22-04-2016 YE0192 9252474103317e518cb5f920488c8c3f 274 PANTHER PTHR31689 1 272 2.1E-140 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 YE0192 9252474103317e518cb5f920488c8c3f 274 Pfam PF01678 Diaminopimelate epimerase 3 123 3.0E-33 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 YE0192 9252474103317e518cb5f920488c8c3f 274 Pfam PF01678 Diaminopimelate epimerase 152 267 2.2E-32 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 YE0192 9252474103317e518cb5f920488c8c3f 274 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 1 274 39.159 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 YE0192 9252474103317e518cb5f920488c8c3f 274 Gene3D G3DSA:3.10.310.10 122 262 8.1E-51 T 22-04-2016 YE0192 9252474103317e518cb5f920488c8c3f 274 Gene3D G3DSA:3.10.310.10 1 121 8.1E-50 T 22-04-2016 YE0192 9252474103317e518cb5f920488c8c3f 274 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 64 78 - T 22-04-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 YE0192 9252474103317e518cb5f920488c8c3f 274 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 1 273 1.0E-101 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 YE2231 f1738fff578e0fb0fc043c40a98ef59b 301 SUPERFAMILY SSF161098 99 282 1.57E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE2231 f1738fff578e0fb0fc043c40a98ef59b 301 PANTHER PTHR30465 16 301 1.5E-142 T 22-04-2016 YE2231 f1738fff578e0fb0fc043c40a98ef59b 301 Gene3D G3DSA:1.10.3720.10 101 298 1.1E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE2231 f1738fff578e0fb0fc043c40a98ef59b 301 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 299 1.6E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE2231 f1738fff578e0fb0fc043c40a98ef59b 301 PANTHER PTHR30465:SF9 16 301 1.5E-142 T 22-04-2016 YE2231 f1738fff578e0fb0fc043c40a98ef59b 301 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 23 70 5.2E-14 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YE3485 4489991751e72d3d7058ce09b72b230c 288 Pfam PF11920 Protein of unknown function (DUF3438) 7 273 1.3E-106 T 22-04-2016 IPR021844 Integrating conjugative element protein, PFL4704 YE3485 4489991751e72d3d7058ce09b72b230c 288 TIGRFAM TIGR03749 conj_TIGR03749: integrating conjugative element protein, PFL_4704 family 10 267 2.8E-105 T 22-04-2016 IPR021844 Integrating conjugative element protein, PFL4704 YE0871A a5221c6b93af2dbc8b042e9f0399504b 178 Pfam PF06891 P2 phage tail completion protein R (GpR) 1 138 3.0E-28 T 22-04-2016 IPR009678 Bacteriophage tail completion protein R YE3450 0ad5d6435e02462973d008789c284fd7 327 Gene3D G3DSA:1.10.443.10 116 313 2.5E-30 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 YE3450 0ad5d6435e02462973d008789c284fd7 327 PANTHER PTHR30349 14 134 1.0E-25 T 22-04-2016 YE3450 0ad5d6435e02462973d008789c284fd7 327 PANTHER PTHR30349 151 321 1.0E-25 T 22-04-2016 YE3450 0ad5d6435e02462973d008789c284fd7 327 PANTHER PTHR30349:SF20 14 134 1.0E-25 T 22-04-2016 YE3450 0ad5d6435e02462973d008789c284fd7 327 PANTHER PTHR30349:SF20 151 321 1.0E-25 T 22-04-2016 YE3450 0ad5d6435e02462973d008789c284fd7 327 SUPERFAMILY SSF56349 11 313 1.18E-39 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YE3450 0ad5d6435e02462973d008789c284fd7 327 Pfam PF00589 Phage integrase family 116 305 1.1E-22 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 YE1819 e3929607bc808a9b09fc12fa9554049a 138 Pfam PF04383 KilA-N domain 30 132 3.1E-15 T 22-04-2016 IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding YE1819 e3929607bc808a9b09fc12fa9554049a 138 SMART SM01252 30 137 5.5E-24 T 22-04-2016 IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding YE2186 d15d86f35ccb4c334b82323732637ba5 128 PANTHER PTHR30561 25 121 3.6E-12 T 22-04-2016 YE2186 d15d86f35ccb4c334b82323732637ba5 128 SUPERFAMILY SSF103481 46 123 5.49E-10 T 22-04-2016 YE2186 d15d86f35ccb4c334b82323732637ba5 128 Hamap MF_00538 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF [arnF]. 2 126 22.15 T 22-04-2016 IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF UniPathway: UPA00030 YE2186 d15d86f35ccb4c334b82323732637ba5 128 PANTHER PTHR30561:SF9 25 121 3.6E-12 T 22-04-2016 YE2497 679f65486585b6a6f170d4fd5eaf7910 645 PANTHER PTHR31632:SF4 373 618 2.3E-122 T 22-04-2016 YE2497 679f65486585b6a6f170d4fd5eaf7910 645 PANTHER PTHR31632 373 618 2.3E-122 T 22-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 YE2497 679f65486585b6a6f170d4fd5eaf7910 645 Pfam PF03239 Iron permease FTR1 family 156 561 1.2E-83 T 22-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 YE3642 0b1525c8399713ef4b31665eac9bbbdc 154 Pfam PF07811 TadE-like protein 14 54 9.5E-5 T 22-04-2016 IPR012495 TadE-like YE1249 784c28338100ae760d2c4fe7edefd702 313 PANTHER PTHR36698 2 312 4.5E-91 T 22-04-2016 YE1249 784c28338100ae760d2c4fe7edefd702 313 Pfam PF02470 MlaD protein 48 114 6.2E-11 T 22-04-2016 IPR003399 Mce/MlaD YE1249 784c28338100ae760d2c4fe7edefd702 313 PANTHER PTHR36698:SF2 2 312 4.5E-91 T 22-04-2016 YE2788 238bc37adb82e460ce3262881b4b82d6 417 Pfam PF08309 LVIVD repeat 221 250 0.025 T 22-04-2016 IPR013211 LVIVD YE2788 238bc37adb82e460ce3262881b4b82d6 417 SUPERFAMILY SSF51004 137 318 8.11E-9 T 22-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain YE2788 238bc37adb82e460ce3262881b4b82d6 417 SUPERFAMILY SSF51004 16 93 8.11E-9 T 22-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain YE1393 fa66673d7c52665886d26c0170b36728 761 PANTHER PTHR11573:SF17 6 753 0.0 T 22-04-2016 YE1393 fa66673d7c52665886d26c0170b36728 761 PANTHER PTHR11573 6 753 0.0 T 22-04-2016 YE1393 fa66673d7c52665886d26c0170b36728 761 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YE1393 fa66673d7c52665886d26c0170b36728 761 Pfam PF03477 ATP cone domain 6 92 1.1E-15 T 22-04-2016 IPR005144 ATP-cone domain YE1393 fa66673d7c52665886d26c0170b36728 761 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 141 219 6.1E-13 T 22-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 YE1393 fa66673d7c52665886d26c0170b36728 761 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 2.1E-180 T 22-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 YE1393 fa66673d7c52665886d26c0170b36728 761 Gene3D G3DSA:3.20.70.20 610 699 4.4E-42 T 22-04-2016 YE1393 fa66673d7c52665886d26c0170b36728 761 Gene3D G3DSA:3.20.70.20 398 559 4.4E-42 T 22-04-2016 YE1393 fa66673d7c52665886d26c0170b36728 761 Gene3D G3DSA:3.20.70.20 133 344 4.4E-42 T 22-04-2016 YE1393 fa66673d7c52665886d26c0170b36728 761 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 731 4.8E-117 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YE1393 fa66673d7c52665886d26c0170b36728 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 4.8E-39 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YE1393 fa66673d7c52665886d26c0170b36728 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 4.8E-39 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YE1393 fa66673d7c52665886d26c0170b36728 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 4.8E-39 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YE1393 fa66673d7c52665886d26c0170b36728 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 4.8E-39 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YE1393 fa66673d7c52665886d26c0170b36728 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 4.8E-39 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YE1393 fa66673d7c52665886d26c0170b36728 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 4.8E-39 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 YE1393 fa66673d7c52665886d26c0170b36728 761 SUPERFAMILY SSF51998 222 741 1.04E-168 T 22-04-2016 YE1393 fa66673d7c52665886d26c0170b36728 761 SUPERFAMILY SSF48168 10 221 2.49E-73 T 22-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 YE2178 349e11c8daee9ebe9b63045f53e44e75 349 PANTHER PTHR21225 1 349 9.5E-274 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 YE2178 349e11c8daee9ebe9b63045f53e44e75 349 PIRSF PIRSF001361 1 349 7.0E-156 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 YE2178 349e11c8daee9ebe9b63045f53e44e75 349 PANTHER PTHR21225:SF6 1 349 9.5E-274 T 22-04-2016 YE2178 349e11c8daee9ebe9b63045f53e44e75 349 SUPERFAMILY SSF51569 7 346 3.14E-130 T 22-04-2016 YE2178 349e11c8daee9ebe9b63045f53e44e75 349 Gene3D G3DSA:3.20.20.70 8 348 2.0E-145 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YE2178 349e11c8daee9ebe9b63045f53e44e75 349 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 5 348 1.8E-167 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 YE2178 349e11c8daee9ebe9b63045f53e44e75 349 Pfam PF00793 DAHP synthetase I family 41 337 1.6E-101 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 YE4109 468234853a21ce3b1c6cc1e2aa37f299 331 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 42 268 2.3E-27 T 22-04-2016 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system YE3554 3e317009429039b3cea015d9e7636a64 182 Pfam PF09482 Bacterial type III secretion apparatus protein (OrgA_MxiK) 15 162 1.5E-9 T 22-04-2016 IPR013388 Type III secretion apparatus protein OrgA/MxiK GO:0009405 YE2720 f59154456fe835ad3081f6029aaf5610 189 TIGRFAM TIGR02469 CbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 13 132 1.3E-37 T 22-04-2016 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit GO:0008276|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.196|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 YE2720 f59154456fe835ad3081f6029aaf5610 189 SUPERFAMILY SSF53335 3 146 1.72E-26 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE2720 f59154456fe835ad3081f6029aaf5610 189 PANTHER PTHR14741:SF34 1 145 5.8E-40 T 22-04-2016 YE2720 f59154456fe835ad3081f6029aaf5610 189 Gene3D G3DSA:3.40.50.150 11 186 9.2E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YE2720 f59154456fe835ad3081f6029aaf5610 189 PANTHER PTHR14741 1 145 5.8E-40 T 22-04-2016 YE2720 f59154456fe835ad3081f6029aaf5610 189 Pfam PF13847 Methyltransferase domain 31 105 1.2E-7 T 22-04-2016 IPR025714 Methyltransferase domain YE2498 98f2ba83ba3ff0a911b91c0b8d1dd4f3 172 Gene3D G3DSA:3.30.420.150 29 169 7.0E-8 T 22-04-2016 YE3561A ea14f3cd3f272d6c90908d27ed2b43ac 82 Gene3D G3DSA:1.20.120.160 8 74 8.8E-7 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YE3561A ea14f3cd3f272d6c90908d27ed2b43ac 82 SUPERFAMILY SSF47226 8 74 1.02E-8 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YE3561A ea14f3cd3f272d6c90908d27ed2b43ac 82 Pfam PF01627 Hpt domain 8 79 2.3E-7 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 YE0036 d7780f7eec11702de566139857d57652 228 SMART SM00421 148 205 7.5E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE0036 d7780f7eec11702de566139857d57652 228 SUPERFAMILY SSF46894 141 210 3.74E-17 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YE0036 d7780f7eec11702de566139857d57652 228 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 204 2.6E-14 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE0036 d7780f7eec11702de566139857d57652 228 Gene3D G3DSA:1.10.10.10 146 210 9.6E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0036 d7780f7eec11702de566139857d57652 228 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 9.32E-6 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE0036 d7780f7eec11702de566139857d57652 228 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 9.32E-6 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE0036 d7780f7eec11702de566139857d57652 228 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 9.32E-6 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 YE3896 9ce80ca7dd2f233dcba1ded8c732fbe4 123 Pfam PF09350 Domain of unknown function (DUF1992) 7 73 1.7E-20 T 22-04-2016 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain YE3896 9ce80ca7dd2f233dcba1ded8c732fbe4 123 PANTHER PTHR39158 1 121 2.1E-27 T 22-04-2016 YE3117 3d41614b3077954261d02cf4e2f95c7d 176 PANTHER PTHR38013 5 170 2.6E-50 T 22-04-2016 YE3117 3d41614b3077954261d02cf4e2f95c7d 176 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 48 152 8.8E-42 T 22-04-2016 YE0939 ac17cb67b617e9a5203ec773a20b3d6d 112 Pfam PF04899 MbeD/MobD like 3 61 1.2E-8 T 22-04-2016 IPR006983 MbeD/MobD-like YE3179 1ec3a6d5400ad0ca7e0e54ee3a4e71ff 439 PANTHER PTHR30588 2 439 1.8E-232 T 22-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 YE3179 1ec3a6d5400ad0ca7e0e54ee3a4e71ff 439 Pfam PF05525 Branched-chain amino acid transport protein 7 425 3.1E-152 T 22-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 YE3179 1ec3a6d5400ad0ca7e0e54ee3a4e71ff 439 PANTHER PTHR30588:SF0 2 439 1.8E-232 T 22-04-2016 YE3179 1ec3a6d5400ad0ca7e0e54ee3a4e71ff 439 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 415 6.5E-156 T 22-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 YE0474 e27f41a7bf1e3ce609fbf19085109dd8 288 Pfam PF06007 Phosphonate metabolism protein PhnJ 7 278 1.1E-145 T 22-04-2016 IPR010306 Phosphonate metabolism PhnJ GO:0016829|GO:0019700|GO:0042916 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399 YE0474 e27f41a7bf1e3ce609fbf19085109dd8 288 PIRSF PIRSF011468 1 288 8.9E-165 T 22-04-2016 IPR010306 Phosphonate metabolism PhnJ GO:0016829|GO:0019700|GO:0042916 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399 YE4032 d7afe3572ffee3938449b856a3f4558d 404 Pfam PF07690 Major Facilitator Superfamily 28 332 1.1E-32 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 YE4032 d7afe3572ffee3938449b856a3f4558d 404 PANTHER PTHR23501:SF79 23 385 6.5E-97 T 22-04-2016 YE4032 d7afe3572ffee3938449b856a3f4558d 404 Gene3D G3DSA:1.20.1250.20 225 398 3.0E-15 T 22-04-2016 YE4032 d7afe3572ffee3938449b856a3f4558d 404 PANTHER PTHR23501 23 385 6.5E-97 T 22-04-2016 YE4032 d7afe3572ffee3938449b856a3f4558d 404 Gene3D G3DSA:1.20.1250.20 23 201 1.3E-17 T 22-04-2016 YE4032 d7afe3572ffee3938449b856a3f4558d 404 SUPERFAMILY SSF103473 23 398 4.84E-49 T 22-04-2016 IPR020846 Major facilitator superfamily domain YE3663 673df353269cc7287c091be5ca03a357 141 Pfam PF06853 Protein of unknown function (DUF1249) 22 135 6.5E-41 T 22-04-2016 IPR009659 Protein of unknown function DUF1249 YE3663 673df353269cc7287c091be5ca03a357 141 PANTHER PTHR38774 1 140 5.4E-59 T 22-04-2016 YE3663 673df353269cc7287c091be5ca03a357 141 PANTHER PTHR38774:SF1 1 140 5.4E-59 T 22-04-2016 YE2298 d4b734e7245e3c079e4016f8236d98fd 72 Pfam PF07041 Protein of unknown function (DUF1327) 1 70 1.2E-13 T 22-04-2016 IPR009759 Bacteriophage ES18, Gp24 YE1810 375d518bf150b3e92fa3e93478a2c69c 87 Gene3D G3DSA:1.10.10.60 8 82 1.4E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE1810 375d518bf150b3e92fa3e93478a2c69c 87 PANTHER PTHR33609 1 87 5.7E-37 T 22-04-2016 YE1810 375d518bf150b3e92fa3e93478a2c69c 87 Pfam PF01527 Transposase 2 70 9.8E-23 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 YE1810 375d518bf150b3e92fa3e93478a2c69c 87 SUPERFAMILY SSF46689 1 68 1.76E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 YE1224 6df22600e155da68f7271c86eae44e3c 158 PANTHER PTHR42641 1 157 5.1E-102 T 22-04-2016 YE1224 6df22600e155da68f7271c86eae44e3c 158 PANTHER PTHR42641:SF2 1 157 5.1E-102 T 22-04-2016 YE1224 6df22600e155da68f7271c86eae44e3c 158 Pfam PF05232 Chlorhexidine efflux transporter 6 68 1.4E-23 T 22-04-2016 IPR007896 Chlorhexidine efflux transporter YE1224 6df22600e155da68f7271c86eae44e3c 158 Pfam PF05232 Chlorhexidine efflux transporter 74 137 8.0E-23 T 22-04-2016 IPR007896 Chlorhexidine efflux transporter YE1177 220a78e549e9a9b4a0802010e3f5d631 466 TIGRFAM TIGR02783 TrbL_P: P-type conjugative transfer protein TrbL 29 327 4.5E-72 T 22-04-2016 IPR014150 Conjugal transfer, TrbL YE1177 220a78e549e9a9b4a0802010e3f5d631 466 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 65 271 2.7E-32 T 22-04-2016 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 YE2149 ed78191ac0e93a176530aae4ea724535 79 Pfam PF06945 Protein of unknown function (DUF1289) 12 57 3.9E-19 T 22-04-2016 IPR010710 Protein of unknown function DUF1289 YE2149 ed78191ac0e93a176530aae4ea724535 79 PANTHER PTHR35175:SF1 1 79 9.0E-50 T 22-04-2016 YE2149 ed78191ac0e93a176530aae4ea724535 79 PANTHER PTHR35175 1 79 9.0E-50 T 22-04-2016 YE1026A 5cb91d3971f0fc17ed72725f9d49d482 90 SUPERFAMILY SSF47413 3 73 1.41E-28 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE1026A 5cb91d3971f0fc17ed72725f9d49d482 90 Gene3D G3DSA:1.10.260.40 2 73 4.9E-37 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 YE1026A 5cb91d3971f0fc17ed72725f9d49d482 90 Pfam PF13693 Winged helix-turn-helix DNA-binding 7 80 2.6E-36 T 22-04-2016 YE0821 a301cad3e4ab92f4af4ffe0d662ae72f 372 PANTHER PTHR32196 1 364 5.8E-144 T 22-04-2016 YE0821 a301cad3e4ab92f4af4ffe0d662ae72f 372 Pfam PF02653 Branched-chain amino acid transport system / permease component 61 340 1.3E-49 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YE0821 a301cad3e4ab92f4af4ffe0d662ae72f 372 PANTHER PTHR32196:SF21 1 364 5.8E-144 T 22-04-2016 YE0458 f73c0cda11dce4e4f8d9d251ed8377a8 674 Pfam PF07940 Heparinase II/III-like protein 375 544 3.1E-18 T 22-04-2016 IPR012480 Heparinase II/III-like MetaCyc: PWY-7651 YE0458 f73c0cda11dce4e4f8d9d251ed8377a8 674 Gene3D G3DSA:1.50.10.110 104 348 1.2E-14 T 22-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 YE0458 f73c0cda11dce4e4f8d9d251ed8377a8 674 SUPERFAMILY SSF48230 24 317 5.04E-35 T 22-04-2016 IPR008929 Chondroitin AC/alginate lyase YE2345 bedb6ba5d75a3f1c580d2a9c24e286ee 231 Pfam PF06992 Replication protein P 33 227 5.0E-52 T 22-04-2016 IPR009731 Replication P GO:0006270 YE3535 aed826ab4378661130946025448c6596 348 Pfam PF06511 Invasion plasmid antigen IpaD 81 334 7.8E-8 T 22-04-2016 IPR009483 Invasion plasmid antigen IpaD GO:0009405 YE3535 aed826ab4378661130946025448c6596 348 SUPERFAMILY SSF140693 39 206 3.53E-76 T 22-04-2016 YE3535 aed826ab4378661130946025448c6596 348 SUPERFAMILY SSF140693 236 340 3.53E-76 T 22-04-2016 YE0238 e9b93e9db24823ed53c9c758164c9328 228 SUPERFAMILY SSF49354 20 127 3.66E-7 T 22-04-2016 IPR008962 PapD-like YE4164 5a7842b34209db6ed95d4bb0e2842128 137 Gene3D G3DSA:2.60.40.790 5 137 1.7E-13 T 22-04-2016 IPR008978 HSP20-like chaperone YE4164 5a7842b34209db6ed95d4bb0e2842128 137 SUPERFAMILY SSF49764 30 137 2.02E-18 T 22-04-2016 IPR008978 HSP20-like chaperone YE4164 5a7842b34209db6ed95d4bb0e2842128 137 PANTHER PTHR11527 5 137 4.0E-42 T 22-04-2016 IPR031107 Small heat shock protein HSP20 YE4164 5a7842b34209db6ed95d4bb0e2842128 137 Pfam PF00011 Hsp20/alpha crystallin family 42 137 2.3E-20 T 22-04-2016 IPR002068 Alpha crystallin/Hsp20 domain YE4164 5a7842b34209db6ed95d4bb0e2842128 137 PANTHER PTHR11527:SF122 5 137 4.0E-42 T 22-04-2016 YE1041 0d18b2478354f6d5a78f5fa0e0261dd4 117 Pfam PF10941 Protein of unknown function DUF2620 2 116 2.6E-48 T 22-04-2016 IPR021238 Protein of unknown function DUF2620 YE3982 b582e92d7cf9fc7c5f989311db2a6434 715 Pfam PF07095 Intracellular growth attenuator protein IgaA 1 710 0.0 T 22-04-2016 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 YE3982 b582e92d7cf9fc7c5f989311db2a6434 715 ProDom PD147088 MEMBRANE INNER TRANSMEMBRANE IGAA HOMOLOG DEHYDROGENASE GROWTH ATTENUATOR INTRACELLULAR GENOME 22 704 0.0 T 22-04-2016 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 YE3371 2522fcdf5d1f2079957b358d18d35492 225 Pfam PF09669 Phage regulatory protein Rha (Phage_pRha) 14 96 7.0E-20 T 22-04-2016 IPR014054 Bacteriophage regulatory protein, Rha family YE2496 b4e260d7bf39bdd69191ce18ecb18aad 175 Pfam PF10634 Fe2+ transport protein 25 173 1.6E-70 T 22-04-2016 IPR018470 Periplasmic metal-binding protein Tp34-type YE2496 b4e260d7bf39bdd69191ce18ecb18aad 175 PIRSF PIRSF017018 1 175 2.6E-73 T 22-04-2016 IPR018470 Periplasmic metal-binding protein Tp34-type YE4113 9ab82cbaea75f9b6f41190bddfd286a8 122 Gene3D G3DSA:1.10.10.10 10 107 2.2E-39 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE4113 9ab82cbaea75f9b6f41190bddfd286a8 122 SUPERFAMILY SSF46785 10 108 1.25E-38 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE4113 9ab82cbaea75f9b6f41190bddfd286a8 122 Pfam PF03288 Poxvirus D5 protein-like 9 106 8.1E-22 T 22-04-2016 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal YE1814 798d8db69da3a895f9664aafdba655ad 98 Pfam PF05449 Putative 3TM holin, Phage_holin_3 11 87 1.6E-21 T 22-04-2016 IPR008473 Putative 3TM holin, Phage holin 3 YE1695 6ca043d7f9f5439e386d0c6a172a67fc 276 SUPERFAMILY SSF50630 146 264 3.18E-6 T 22-04-2016 IPR021109 Aspartic peptidase domain YE1766 cc5201847bf730bfdc9913be49296a0e 239 Gene3D G3DSA:3.60.140.10 34 215 9.7E-53 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase YE1766 cc5201847bf730bfdc9913be49296a0e 239 SUPERFAMILY SSF64438 23 194 2.93E-47 T 22-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic YE1766 cc5201847bf730bfdc9913be49296a0e 239 PANTHER PTHR30616 23 191 2.5E-59 T 22-04-2016 YE1766 cc5201847bf730bfdc9913be49296a0e 239 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 38 193 1.3E-42 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase YE1766 cc5201847bf730bfdc9913be49296a0e 239 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 36 194 8.4E-45 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase YE1620 8d51e2f2839c5c828842b357328983fe 353 PANTHER PTHR21716 1 353 7.1E-234 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like YE1620 8d51e2f2839c5c828842b357328983fe 353 Pfam PF01594 Domain of unknown function DUF20 14 327 1.5E-70 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like YE1620 8d51e2f2839c5c828842b357328983fe 353 PANTHER PTHR21716:SF18 1 353 7.1E-234 T 22-04-2016 YEP0044 70a81e4e29525d21764050fed261fb43 115 PANTHER PTHR13932 1 115 4.3E-62 T 22-04-2016 YEP0044 70a81e4e29525d21764050fed261fb43 115 PANTHER PTHR13932:SF6 1 115 4.3E-62 T 22-04-2016 YEP0044 70a81e4e29525d21764050fed261fb43 115 SUPERFAMILY SSF102114 6 115 1.65E-32 T 22-04-2016 YE0825 d00fb43b795af49094f532f7e9c92868 473 PANTHER PTHR36120 5 473 8.4E-256 T 22-04-2016 YE0825 d00fb43b795af49094f532f7e9c92868 473 Pfam PF02952 L-fucose isomerase, C-terminal domain 343 471 6.5E-38 T 22-04-2016 IPR015888 L-fucose isomerase, C-terminal GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25|UniPathway: UPA00563 YE0825 d00fb43b795af49094f532f7e9c92868 473 SUPERFAMILY SSF53743 6 325 4.45E-65 T 22-04-2016 IPR009015 L-fucose isomerase, N-terminal/central domain GO:0005737|GO:0005996|GO:0016861 YE0825 d00fb43b795af49094f532f7e9c92868 473 PANTHER PTHR36120:SF1 5 473 8.4E-256 T 22-04-2016 YE1758 7fee4ca3ab25064ef6a3b9e26cbc9eed 91 Pfam PF13974 YebO-like protein 16 91 8.7E-29 T 22-04-2016 IPR025594 YebO-like protein YE1494 01ae00788bce70f102bb534cac1dad34 238 PANTHER PTHR30133 1 238 1.3E-160 T 22-04-2016 YE1494 01ae00788bce70f102bb534cac1dad34 238 Gene3D G3DSA:1.10.3720.10 4 230 3.0E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE1494 01ae00788bce70f102bb534cac1dad34 238 PANTHER PTHR30133:SF2 1 238 1.3E-160 T 22-04-2016 YE1494 01ae00788bce70f102bb534cac1dad34 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 25 231 3.5E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE1494 01ae00788bce70f102bb534cac1dad34 238 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 4 79 2.2E-13 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 YE1494 01ae00788bce70f102bb534cac1dad34 238 SUPERFAMILY SSF161098 7 216 1.31E-36 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE1669 a481914ba8b3b05c3adcaa323a747803 205 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 127 194 1.8E-11 T 22-04-2016 IPR006522 Phage virion morphogensis protein YE1669 a481914ba8b3b05c3adcaa323a747803 205 Pfam PF05069 Phage virion morphogenesis family 117 198 8.1E-15 T 22-04-2016 IPR006522 Phage virion morphogensis protein YE1669 a481914ba8b3b05c3adcaa323a747803 205 Pfam PF05069 Phage virion morphogenesis family 4 65 2.4E-9 T 22-04-2016 IPR006522 Phage virion morphogensis protein YE3750 9591ff07125c4f32335b84f4523cc602 186 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 3 152 9.7E-54 T 22-04-2016 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 YE3750 9591ff07125c4f32335b84f4523cc602 186 Pfam PF02470 MlaD protein 39 116 8.0E-19 T 22-04-2016 IPR003399 Mce/MlaD YE3750 9591ff07125c4f32335b84f4523cc602 186 PANTHER PTHR33371 1 152 1.6E-46 T 22-04-2016 YE1212 a069ffd01694f32d004cf6af77fb8e64 72 PANTHER PTHR40613 1 72 1.4E-38 T 22-04-2016 YE1212 a069ffd01694f32d004cf6af77fb8e64 72 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 3 68 1.5E-31 T 22-04-2016 IPR024530 Putative quorum-sensing-regulated virulence factor YE1212 a069ffd01694f32d004cf6af77fb8e64 72 PANTHER PTHR40613:SF1 1 72 1.4E-38 T 22-04-2016 YE1212 a069ffd01694f32d004cf6af77fb8e64 72 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 14 68 2.0E-24 T 22-04-2016 IPR024530 Putative quorum-sensing-regulated virulence factor YE0959 d71206f6679ce4f188413d445f2b40bf 352 Pfam PF03824 High-affinity nickel-transport protein 48 338 9.1E-91 T 22-04-2016 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 YE0959 d71206f6679ce4f188413d445f2b40bf 352 PANTHER PTHR31611 18 343 7.0E-119 T 22-04-2016 YE0959 d71206f6679ce4f188413d445f2b40bf 352 TIGRFAM TIGR00802 nico: transition metal uptake transporter, Ni2+-Co2+ transporter (NiCoT) family 52 333 5.4E-126 T 22-04-2016 IPR004688 Transition metal uptake transporter nickel/cobalt GO:0015099|GO:0016021|GO:0035444|GO:0046872 YE0876 ff1558a2b4576c9b088324e5d535a4cb 113 SUPERFAMILY SSF55166 14 107 7.85E-15 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain YE0876 ff1558a2b4576c9b088324e5d535a4cb 113 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 50 106 4.7E-11 T 22-04-2016 YE2523 f4d38c1be4713f0c2da6871dca6cc496 369 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 139 3.8E-42 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YE2523 f4d38c1be4713f0c2da6871dca6cc496 369 SUPERFAMILY SSF64518 1 369 2.88E-96 T 22-04-2016 YE2523 f4d38c1be4713f0c2da6871dca6cc496 369 PRINTS PR00207 Flagellin signature 110 133 4.9E-30 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 YE2523 f4d38c1be4713f0c2da6871dca6cc496 369 PRINTS PR00207 Flagellin signature 36 53 4.9E-30 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 YE2523 f4d38c1be4713f0c2da6871dca6cc496 369 PRINTS PR00207 Flagellin signature 75 94 4.9E-30 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 YE2523 f4d38c1be4713f0c2da6871dca6cc496 369 Pfam PF00700 Bacterial flagellin C-terminal helical region 284 368 2.8E-30 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YE2523 f4d38c1be4713f0c2da6871dca6cc496 369 Gene3D G3DSA:1.20.1330.10 53 173 9.5E-49 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YE2523 f4d38c1be4713f0c2da6871dca6cc496 369 Gene3D G3DSA:1.20.1330.10 271 325 9.5E-49 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 YE2523 f4d38c1be4713f0c2da6871dca6cc496 369 PANTHER PTHR30244 2 223 8.0E-119 T 22-04-2016 YE2523 f4d38c1be4713f0c2da6871dca6cc496 369 PANTHER PTHR30244 279 369 8.0E-119 T 22-04-2016 YE2523 f4d38c1be4713f0c2da6871dca6cc496 369 PANTHER PTHR30244:SF1 2 223 8.0E-119 T 22-04-2016 YE2523 f4d38c1be4713f0c2da6871dca6cc496 369 PANTHER PTHR30244:SF1 279 369 8.0E-119 T 22-04-2016 YE3614A c1db80bef735bbaa767dbc90ad052c8a 36 Pfam PF02954 Bacterial regulatory protein, Fis family 1 23 1.6E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 YE3950 9dbb65f8cca41d5b0dd6f700bf84e3e6 200 PANTHER PTHR30086 1 190 2.8E-91 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 YE3950 9dbb65f8cca41d5b0dd6f700bf84e3e6 200 PANTHER PTHR30086:SF12 1 190 2.8E-91 T 22-04-2016 YE3950 9dbb65f8cca41d5b0dd6f700bf84e3e6 200 Pfam PF01810 LysE type translocator 16 189 1.5E-15 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 YE3610 6bda803ce19406b76b68034f62256db6 155 Pfam PF05433 Glycine zipper 2TM domain 62 103 1.4E-9 T 22-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 YE3610 6bda803ce19406b76b68034f62256db6 155 PANTHER PTHR35603 1 155 3.0E-44 T 22-04-2016 YE3490 b53d77dafd58a991e2fc05e4183245b5 102 Pfam PF09686 Plasmid protein of unknown function (Plasmid_RAQPRD) 21 97 2.1E-25 T 22-04-2016 IPR019110 Uncharacterised protein family, RAQPRD YE3490 b53d77dafd58a991e2fc05e4183245b5 102 TIGRFAM TIGR01690 ICE_RAQPRD: integrative conjugative element protein, RAQPRD family 6 99 1.6E-32 T 22-04-2016 IPR019110 Uncharacterised protein family, RAQPRD YE1565 55de58cc4c766cffe31249def161556d 401 SUPERFAMILY SSF51690 120 392 1.41E-86 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 YE1565 55de58cc4c766cffe31249def161556d 401 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 169 394 6.5E-81 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 YE1565 55de58cc4c766cffe31249def161556d 401 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 5 396 48.972 T 22-04-2016 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 YE1565 55de58cc4c766cffe31249def161556d 401 PANTHER PTHR11098:SF14 1 397 4.2E-282 T 22-04-2016 YE1565 55de58cc4c766cffe31249def161556d 401 PIRSF PIRSF000484 1 380 1.1E-59 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 YE1565 55de58cc4c766cffe31249def161556d 401 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 8 395 7.7E-168 T 22-04-2016 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 YE1565 55de58cc4c766cffe31249def161556d 401 PANTHER PTHR11098 1 397 4.2E-282 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 YE1565 55de58cc4c766cffe31249def161556d 401 Gene3D G3DSA:3.20.140.10 4 395 2.4E-147 T 22-04-2016 YE1565 55de58cc4c766cffe31249def161556d 401 SUPERFAMILY SSF54675 3 139 1.8E-44 T 22-04-2016 YE2881 f371f557a83cb0150126b830d97c25b4 113 SMART SM00507 15 70 3.5E-4 T 22-04-2016 IPR003615 HNH nuclease YE2881 f371f557a83cb0150126b830d97c25b4 113 Pfam PF01844 HNH endonuclease 27 75 3.0E-10 T 22-04-2016 IPR002711 HNH endonuclease GO:0003676|GO:0004519 YE3183 45a17aa2bf88d6689e4ce2e5e6ff0503 412 Pfam PF00149 Calcineurin-like phosphoesterase 1 99 9.4E-14 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 YE3183 45a17aa2bf88d6689e4ce2e5e6ff0503 412 PANTHER PTHR30337 1 412 6.3E-142 T 22-04-2016 YE3183 45a17aa2bf88d6689e4ce2e5e6ff0503 412 PANTHER PTHR30337:SF0 1 412 6.3E-142 T 22-04-2016 YE3183 45a17aa2bf88d6689e4ce2e5e6ff0503 412 Gene3D G3DSA:3.60.21.10 1 275 1.1E-63 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like YE3183 45a17aa2bf88d6689e4ce2e5e6ff0503 412 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 259 2.9E-77 T 22-04-2016 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 YE3183 45a17aa2bf88d6689e4ce2e5e6ff0503 412 SUPERFAMILY SSF56300 1 339 2.09E-58 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like YE3183 45a17aa2bf88d6689e4ce2e5e6ff0503 412 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 282 378 6.4E-25 T 22-04-2016 IPR026843 Nuclease SbcCD subunit D, C-terminal domain YE3525 c15dcc1977d7b6cd427e3fbe8c6254b7 85 Gene3D G3DSA:3.30.420.10 3 72 2.2E-10 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE3525 c15dcc1977d7b6cd427e3fbe8c6254b7 85 Pfam PF13683 Integrase core domain 6 71 3.6E-13 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 YE3525 c15dcc1977d7b6cd427e3fbe8c6254b7 85 SUPERFAMILY SSF53098 3 76 8.72E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 YE1545 b2bc3cdf219b8e404c98d7d31bafb191 449 PANTHER PTHR39479:SF2 1 449 1.0E-266 T 22-04-2016 YE1545 b2bc3cdf219b8e404c98d7d31bafb191 449 Pfam PF07063 Domain of unknown function (DUF1338) 1 395 1.9E-113 T 22-04-2016 IPR009770 Domain of unknown function DUF1338 YE1545 b2bc3cdf219b8e404c98d7d31bafb191 449 PANTHER PTHR39479 1 449 1.0E-266 T 22-04-2016 YE1545 b2bc3cdf219b8e404c98d7d31bafb191 449 SMART SM01150 1 395 7.9E-214 T 22-04-2016 IPR009770 Domain of unknown function DUF1338 YE1957 a1da915dd3333e147f1d250bcefe91be 427 PANTHER PTHR30569 1 425 2.4E-82 T 22-04-2016 IPR030191 Cytosine permease GO:0015209|GO:0016021 YE1957 a1da915dd3333e147f1d250bcefe91be 427 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 32 397 7.1E-22 T 22-04-2016 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 YE3536 1f7d49257b58b46691b43ced6a6b0505 443 TIGRFAM TIGR02101 IpaC_SipC: type III secretion target, IpaC/SipC family 126 441 9.4E-109 T 22-04-2016 IPR005427 Salmonella/Shigella invasin protein C GO:0009405 YE3536 1f7d49257b58b46691b43ced6a6b0505 443 PRINTS PR01608 Salmonella/Shigella invasin protein C signature 262 283 6.2E-8 T 22-04-2016 IPR005427 Salmonella/Shigella invasin protein C GO:0009405 YE3536 1f7d49257b58b46691b43ced6a6b0505 443 PRINTS PR01608 Salmonella/Shigella invasin protein C signature 418 443 6.2E-8 T 22-04-2016 IPR005427 Salmonella/Shigella invasin protein C GO:0009405 YE3536 1f7d49257b58b46691b43ced6a6b0505 443 PRINTS PR01608 Salmonella/Shigella invasin protein C signature 215 234 6.2E-8 T 22-04-2016 IPR005427 Salmonella/Shigella invasin protein C GO:0009405 YE3536 1f7d49257b58b46691b43ced6a6b0505 443 PRINTS PR01608 Salmonella/Shigella invasin protein C signature 234 257 6.2E-8 T 22-04-2016 IPR005427 Salmonella/Shigella invasin protein C GO:0009405 YE1091 8299be82db52688f71091fefa309308b 176 Pfam PF08816 Inhibitor of vertebrate lysozyme (Ivy) 56 174 7.2E-47 T 22-04-2016 YE1091 8299be82db52688f71091fefa309308b 176 SUPERFAMILY SSF89872 49 176 3.14E-44 T 22-04-2016 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 YE1091 8299be82db52688f71091fefa309308b 176 Gene3D G3DSA:3.40.1420.10 49 176 2.6E-55 T 22-04-2016 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 YE1091 8299be82db52688f71091fefa309308b 176 PIRSF PIRSF009103 18 176 6.8E-55 T 22-04-2016 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 YE2337 fe72b1364e3cd3992b1512275380fa9a 202 Pfam PF05766 Bacteriophage Lambda NinG protein 9 191 7.6E-49 T 22-04-2016 IPR008713 Bacteriophage lambda NinG YE1236 23e5f130a09e3911c351e67c8b8579be 218 Pfam PF05643 Putative bacterial lipoprotein (DUF799) 10 209 9.7E-98 T 22-04-2016 IPR008517 Protein of unknown function DUF799 YE3592 e4dfee350fa53fd373a046874487cb5f 175 PANTHER PTHR11080 8 134 1.1E-22 T 22-04-2016 YE3592 e4dfee350fa53fd373a046874487cb5f 175 Gene3D G3DSA:3.40.50.850 3 155 6.0E-34 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 YE3592 e4dfee350fa53fd373a046874487cb5f 175 Pfam PF00857 Isochorismatase family 6 139 2.2E-28 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 YE3592 e4dfee350fa53fd373a046874487cb5f 175 SUPERFAMILY SSF52499 4 155 7.59E-37 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 YE1697 ed43775c63fb8d16a935e4ca4e474c88 236 Gene3D G3DSA:2.40.50.100 35 90 6.8E-4 T 22-04-2016 YE0735 bd91a35d3f73511ce4a782c74a2d9827 477 PANTHER PTHR11689:SF96 1 459 1.3E-211 T 22-04-2016 YE0735 bd91a35d3f73511ce4a782c74a2d9827 477 PANTHER PTHR11689 1 459 1.3E-211 T 22-04-2016 YE0735 bd91a35d3f73511ce4a782c74a2d9827 477 SUPERFAMILY SSF81340 25 453 2.35E-110 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 YE0735 bd91a35d3f73511ce4a782c74a2d9827 477 Gene3D G3DSA:1.10.3080.10 29 452 9.7E-102 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 YE0735 bd91a35d3f73511ce4a782c74a2d9827 477 Pfam PF00654 Voltage gated chloride channel 89 437 9.0E-91 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 YE0735 bd91a35d3f73511ce4a782c74a2d9827 477 PRINTS PR00762 Chloride channel signature 102 119 5.5E-28 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 YE0735 bd91a35d3f73511ce4a782c74a2d9827 477 PRINTS PR00762 Chloride channel signature 405 424 5.5E-28 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 YE0735 bd91a35d3f73511ce4a782c74a2d9827 477 PRINTS PR00762 Chloride channel signature 387 403 5.5E-28 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 YE0735 bd91a35d3f73511ce4a782c74a2d9827 477 PRINTS PR00762 Chloride channel signature 183 202 5.5E-28 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 YE0735 bd91a35d3f73511ce4a782c74a2d9827 477 PRINTS PR00762 Chloride channel signature 352 372 5.5E-28 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 YE3680 6e0572b5e60157f94a6274b307cbedeb 217 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 1 195 5.6E-82 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 YE3680 6e0572b5e60157f94a6274b307cbedeb 217 PANTHER PTHR30309:SF0 1 216 1.1E-112 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 YE3680 6e0572b5e60157f94a6274b307cbedeb 217 PANTHER PTHR30309 1 216 1.1E-112 T 22-04-2016 YE3680 6e0572b5e60157f94a6274b307cbedeb 217 Pfam PF02660 Glycerol-3-phosphate acyltransferase 11 184 1.4E-51 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 YE3680 6e0572b5e60157f94a6274b307cbedeb 217 SMART SM01207 10 185 6.1E-86 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 YE3680 6e0572b5e60157f94a6274b307cbedeb 217 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 18.742 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 YE1129 a0108f4d55fece4a15d59e0b97ebdf8c 429 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 329 349 - T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 YE1129 a0108f4d55fece4a15d59e0b97ebdf8c 429 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 11 404 4.9E-128 T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 YE1129 a0108f4d55fece4a15d59e0b97ebdf8c 429 Pfam PF00860 Permease family 16 382 3.6E-105 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 YE1129 a0108f4d55fece4a15d59e0b97ebdf8c 429 PANTHER PTHR11119:SF49 1 425 3.6E-178 T 22-04-2016 YE1129 a0108f4d55fece4a15d59e0b97ebdf8c 429 PANTHER PTHR11119 1 425 3.6E-178 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 YE3782 f00972ace4bf46bc21bc6ce9bb9ff4b1 217 Pfam PF14187 Domain of unknown function (DUF4310) 7 214 2.1E-106 T 22-04-2016 IPR025456 Protein of unknown function DUF4310 YE3782 f00972ace4bf46bc21bc6ce9bb9ff4b1 217 TIGRFAM TIGR03579 EF_0833: conserved hypothetical protein EF_0833/AHA_3914 8 216 2.5E-118 T 22-04-2016 IPR025456 Protein of unknown function DUF4310 YE0783 acf77c2a800a5529db7597c79d445295 178 Gene3D G3DSA:2.60.40.1090 43 178 1.2E-8 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YE0783 acf77c2a800a5529db7597c79d445295 178 Pfam PF00419 Fimbrial protein 45 178 1.7E-17 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 YE0783 acf77c2a800a5529db7597c79d445295 178 SUPERFAMILY SSF49401 54 178 8.95E-25 T 22-04-2016 IPR008966 Adhesion domain YE3385 5c75173464363740230dec466260246a 141 PIRSF PIRSF020653 1 139 2.9E-67 T 22-04-2016 IPR009883 Toxin CptA YE3385 5c75173464363740230dec466260246a 141 ProDom PD083358 MEMBRANE YGFX INNER SIMILAR ECS3768 Y3281 ESCHERICHIA TRANSMEMBRANE YPO0896A STY3202 19 130 6.0E-36 T 22-04-2016 IPR009883 Toxin CptA YE3385 5c75173464363740230dec466260246a 141 Pfam PF07254 Membrane-bound toxin component of toxin-antitoxin system 2 130 2.8E-55 T 22-04-2016 IPR009883 Toxin CptA YE0977 8fc5129e0e2cc0e77b564d6ec84aae3d 401 Pfam PF00589 Phage integrase family 175 339 1.5E-15 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 YE0977 8fc5129e0e2cc0e77b564d6ec84aae3d 401 Gene3D G3DSA:1.10.443.10 173 341 1.8E-22 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 YE0977 8fc5129e0e2cc0e77b564d6ec84aae3d 401 PANTHER PTHR30349 172 334 2.4E-12 T 22-04-2016 YE0977 8fc5129e0e2cc0e77b564d6ec84aae3d 401 PANTHER PTHR30349:SF5 172 334 2.4E-12 T 22-04-2016 YE0977 8fc5129e0e2cc0e77b564d6ec84aae3d 401 SUPERFAMILY SSF56349 172 339 6.18E-18 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 YE0396 8b17502d9e170931fe19a52655063a36 149 Pfam PF12582 Protein of unknown function (DUF3757) 20 142 4.6E-28 T 22-04-2016 IPR022231 Protein of unknown function DUF3757 YE3717 3fd47a5db507439d07ecc58711fed950 94 Pfam PF13997 YqjK-like protein 13 85 2.5E-31 T 22-04-2016 IPR025612 YqjK-like protein YE2933 f7714dbfcbea180533c979ebc4352a71 386 SUPERFAMILY SSF74653 300 386 7.85E-21 T 22-04-2016 YE2933 f7714dbfcbea180533c979ebc4352a71 386 Gene3D G3DSA:3.30.1150.10 287 386 2.2E-42 T 22-04-2016 YE2933 f7714dbfcbea180533c979ebc4352a71 386 TIGRFAM TIGR02794 tolA_full: protein TolA 18 385 1.2E-97 T 22-04-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 YE2933 f7714dbfcbea180533c979ebc4352a71 386 Pfam PF06519 TolA C-terminal 291 383 1.4E-35 T 22-04-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 YE2321 22c832aeca2c4f165cc6cf3bedaf7f1a 401 SMART SM00635 318 395 7.8E-19 T 22-04-2016 IPR003343 Bacterial Ig-like, group 2 YE2321 22c832aeca2c4f165cc6cf3bedaf7f1a 401 Pfam PF02368 Bacterial Ig-like domain (group 2) 319 396 2.7E-17 T 22-04-2016 IPR003343 Bacterial Ig-like, group 2 YE2321 22c832aeca2c4f165cc6cf3bedaf7f1a 401 Gene3D G3DSA:2.60.40.1080 319 399 4.2E-21 T 22-04-2016 YE2321 22c832aeca2c4f165cc6cf3bedaf7f1a 401 SUPERFAMILY SSF49373 317 398 5.49E-17 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments YE2064 e2962859623e2ef11bcde36dfba6bce1 259 SUPERFAMILY SSF51197 25 64 1.72E-6 T 22-04-2016 YE2064 e2962859623e2ef11bcde36dfba6bce1 259 SUPERFAMILY SSF51197 95 241 1.72E-6 T 22-04-2016 YE0126 8633a31d3c98daf2439a8e5fc220966a 202 SUPERFAMILY SSF54621 3 176 4.84E-14 T 22-04-2016 IPR010495 Haem-binding HasA YE0126 8633a31d3c98daf2439a8e5fc220966a 202 Pfam PF06438 Heme-binding protein A (HasA) 1 202 3.0E-33 T 22-04-2016 IPR010495 Haem-binding HasA YE0126 8633a31d3c98daf2439a8e5fc220966a 202 Gene3D G3DSA:3.30.1500.10 1 183 1.6E-29 T 22-04-2016 IPR010495 Haem-binding HasA YE1443 5d396a2f22a9bab9ce057d2ac133f338 84 Pfam PF03692 Putative zinc- or iron-chelating domain 2 59 4.3E-5 T 22-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein YE1443 5d396a2f22a9bab9ce057d2ac133f338 84 PANTHER PTHR36931 1 84 1.1E-37 T 22-04-2016 YE0907 5ffc494f756a2d99620ca57cdfc567df 190 Pfam PF11659 Protein of unknown function (DUF3261) 13 163 2.2E-39 T 22-04-2016 IPR021675 Protein of unknown function DUF3261 YE0431 437c728a415e9bb328f6e0f61628ef07 111 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 73 2.7E-26 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 YE0431 437c728a415e9bb328f6e0f61628ef07 111 Pfam PF03840 Preprotein translocase SecG subunit 5 72 3.8E-22 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 YE0431 437c728a415e9bb328f6e0f61628ef07 111 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 3.8E-41 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 YE0431 437c728a415e9bb328f6e0f61628ef07 111 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 3.8E-41 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 YE0431 437c728a415e9bb328f6e0f61628ef07 111 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 3.8E-41 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 YE0431 437c728a415e9bb328f6e0f61628ef07 111 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 3.8E-41 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 YE0431 437c728a415e9bb328f6e0f61628ef07 111 PANTHER PTHR34182 2 111 1.3E-37 T 22-04-2016 YE0869 53d18c2f508a9552abaf3588b3f38f13 388 Pfam PF05125 Phage major capsid protein, P2 family 36 352 1.3E-78 T 22-04-2016 IPR006441 Bacteriophage P2, GpN, major capsid GO:0019028 YE0869 53d18c2f508a9552abaf3588b3f38f13 388 TIGRFAM TIGR01551 major_capsid_P2: phage major capsid protein, P2 family 36 343 2.5E-69 T 22-04-2016 IPR006441 Bacteriophage P2, GpN, major capsid GO:0019028 YE2800 a80c4a280c49bff3b99ca9815712d7e3 317 PANTHER PTHR11432 9 317 9.8E-123 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 YE2800 a80c4a280c49bff3b99ca9815712d7e3 317 Pfam PF00146 NADH dehydrogenase 19 311 2.7E-51 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 YE2800 a80c4a280c49bff3b99ca9815712d7e3 317 PANTHER PTHR11432:SF1 9 317 9.8E-123 T 22-04-2016 YE2800 a80c4a280c49bff3b99ca9815712d7e3 317 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 203 216 - T 22-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 YE3103 b62d48287192004eb97c2609ee9a4357 391 Pfam PF01168 Alanine racemase, N-terminal domain 33 264 3.9E-19 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 YE3103 b62d48287192004eb97c2609ee9a4357 391 SUPERFAMILY SSF51419 34 268 4.97E-24 T 22-04-2016 IPR029066 PLP-binding barrel YE3103 b62d48287192004eb97c2609ee9a4357 391 Gene3D G3DSA:3.20.20.10 36 191 3.8E-8 T 22-04-2016 IPR029066 PLP-binding barrel YE0975A d6bdc2e1ea0d17382b8553f2a113e40f 66 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 5 54 2.5E-19 T 22-04-2016 IPR010260 Prophage CP4-57 regulatory protein (AlpA) YE0975A d6bdc2e1ea0d17382b8553f2a113e40f 66 PANTHER PTHR36154 1 65 1.4E-15 T 22-04-2016 YE3494A 78909db104fe96167db2edeb81009bb0 182 Gene3D G3DSA:1.10.530.10 6 132 7.6E-10 T 22-04-2016 YE3494A 78909db104fe96167db2edeb81009bb0 182 Pfam PF01464 Transglycosylase SLT domain 12 132 7.5E-6 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 YE3494A 78909db104fe96167db2edeb81009bb0 182 SUPERFAMILY SSF53955 6 49 4.57E-18 T 22-04-2016 IPR023346 Lysozyme-like domain YE3494A 78909db104fe96167db2edeb81009bb0 182 SUPERFAMILY SSF53955 77 160 4.57E-18 T 22-04-2016 IPR023346 Lysozyme-like domain YE2970 47d46f7a990ba400ca3fbca3af863f1b 95 Pfam PF01402 Ribbon-helix-helix protein, copG family 52 88 6.5E-8 T 22-04-2016 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 YE3598 57f45d619d9c4a7df75d583736cf53f5 223 Pfam PF11769 Protein of unknown function (DUF3313) 19 212 1.1E-50 T 22-04-2016 IPR021747 Protein of unknown function DUF3313 YE0475 a20d053af3d6b976d7278aac87c58881 370 Pfam PF05861 Bacterial phosphonate metabolism protein (PhnI) 1 356 2.9E-158 T 22-04-2016 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 YE0475 a20d053af3d6b976d7278aac87c58881 370 PIRSF PIRSF007313 1 366 8.9E-166 T 22-04-2016 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 YE2095 6dd1828e0317933e80a21f01cdeabaa8 123 PIRSF PIRSF025560 5 123 1.1E-41 T 22-04-2016 IPR008309 Uncharacterised conserved protein UCP025560 YE2095 6dd1828e0317933e80a21f01cdeabaa8 123 Pfam PF07027 Protein of unknown function (DUF1318) 35 123 7.2E-30 T 22-04-2016 IPR008309 Uncharacterised conserved protein UCP025560 YE1786 b800d6fea0b143701d3deb74ec9e1256 106 Gene3D G3DSA:1.10.10.710 20 88 8.1E-29 T 22-04-2016 IPR009813 Uncharacterised protein family YebG YE1786 b800d6fea0b143701d3deb74ec9e1256 106 Pfam PF07130 YebG protein 1 74 2.2E-35 T 22-04-2016 IPR009813 Uncharacterised protein family YebG YE0803 5ba83eb114245af3db3bb935b90d62df 212 SUPERFAMILY SSF161098 10 195 1.31E-35 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE0803 5ba83eb114245af3db3bb935b90d62df 212 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 203 1.2E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE0803 5ba83eb114245af3db3bb935b90d62df 212 Gene3D G3DSA:1.10.3720.10 8 207 2.9E-32 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE0803 5ba83eb114245af3db3bb935b90d62df 212 PANTHER PTHR30614 1 207 1.0E-51 T 22-04-2016 YE0803 5ba83eb114245af3db3bb935b90d62df 212 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 8 103 5.3E-23 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 YE0317 4de23c95966b3f9a281c6c1da647ec9d 321 Pfam PF16220 Domain of unknown function (DUF4880) 13 55 4.3E-10 T 22-04-2016 IPR032623 FecR, N-terminal YE0317 4de23c95966b3f9a281c6c1da647ec9d 321 PANTHER PTHR30273 5 318 2.5E-62 T 22-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component YE0317 4de23c95966b3f9a281c6c1da647ec9d 321 PIRSF PIRSF018266 2 317 1.9E-73 T 22-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component YE0317 4de23c95966b3f9a281c6c1da647ec9d 321 Pfam PF04773 FecR protein 115 200 3.1E-19 T 22-04-2016 IPR006860 FecR protein YE0317 4de23c95966b3f9a281c6c1da647ec9d 321 PANTHER PTHR30273:SF2 5 318 2.5E-62 T 22-04-2016 YE1674 0ef509157f51bd1d0dc5b4948dd8a097 160 Pfam PF05926 Phage head completion protein (GPL) 22 160 3.3E-56 T 22-04-2016 IPR009225 Bacteriophage head completion protein GpL GO:0019069 YE3714 864f26e9354f6a786e0782615a0c316a 110 Pfam PF06476 Protein of unknown function (DUF1090) 7 105 4.1E-36 T 22-04-2016 IPR009468 Protein of unknown function DUF1090 YE3140 7eb44c369fb31ac84df7c421c62b3ad2 259 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 34 259 1.3E-50 T 22-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 YE3140 7eb44c369fb31ac84df7c421c62b3ad2 259 SUPERFAMILY SSF111364 26 259 1.96E-33 T 22-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 YE3631 374f6084e5787dc00c422a5f55f4c6cb 221 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 24 213 2.1E-51 T 22-04-2016 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like YE3631 374f6084e5787dc00c422a5f55f4c6cb 221 Gene3D G3DSA:2.60.120.590 16 217 3.3E-54 T 22-04-2016 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like YE3631 374f6084e5787dc00c422a5f55f4c6cb 221 PANTHER PTHR16557 48 220 1.3E-52 T 22-04-2016 IPR004574 Alkylated DNA repair protein AlkB GO:0006281|GO:0055114 YE3631 374f6084e5787dc00c422a5f55f4c6cb 221 SUPERFAMILY SSF51197 18 214 1.03E-58 T 22-04-2016 YE1298 9b782e974ccafe819dd846934511951d 345 PIRSF PIRSF020588 1 344 4.5E-148 T 22-04-2016 IPR023597 Flagellar regulator Flk GO:0010468|GO:0031224 YE3607 179f8c1707e9a72cdc7222e35a37cc56 397 PANTHER PTHR30074 2 392 4.9E-211 T 22-04-2016 YE3607 179f8c1707e9a72cdc7222e35a37cc56 397 PANTHER PTHR30074:SF4 2 392 4.9E-211 T 22-04-2016 YE3757 bcaa45f31870436c4e0544007e8f810d 181 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 5 165 24.943 T 22-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 YE3757 bcaa45f31870436c4e0544007e8f810d 181 PANTHER PTHR36504 1 181 7.1E-54 T 22-04-2016 YE3757 bcaa45f31870436c4e0544007e8f810d 181 Gene3D G3DSA:2.60.450.10 26 161 2.0E-38 T 22-04-2016 YE3757 bcaa45f31870436c4e0544007e8f810d 181 Pfam PF03968 OstA-like protein 36 146 2.2E-27 T 22-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal YE3757 bcaa45f31870436c4e0544007e8f810d 181 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 25 164 7.5E-47 T 22-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 YE0237 9a757b6d49acb5c7c4bd55a868a2b953 209 SUPERFAMILY SSF49354 21 115 4.97E-5 T 22-04-2016 IPR008962 PapD-like YE1980 bb77e4944494b6c88f2846412a07e9a3 110 Pfam PF04328 Protein of unknown function (DUF466) 47 110 1.2E-24 T 22-04-2016 IPR007423 Protein of unknown function DUF466 YE1980 bb77e4944494b6c88f2846412a07e9a3 110 PANTHER PTHR38453:SF1 36 109 3.9E-41 T 22-04-2016 YE1980 bb77e4944494b6c88f2846412a07e9a3 110 PANTHER PTHR38453 36 109 3.9E-41 T 22-04-2016 YE2975 2df18f575fec24da4ea2d667960d0d57 108 Pfam PF13982 YbfN-like lipoprotein 23 108 9.7E-47 T 22-04-2016 IPR025727 YbfN-like lipoprotein YE1702 f2a2fa6db6a44198a4ac840cd0ecb56f 129 Pfam PF07233 Protein of unknown function (DUF1425) 38 127 1.0E-26 T 22-04-2016 IPR010824 Protein of unknown function DUF1425 YE2866 671ef47967fb84a90997e640b7e74a47 352 Pfam PF00487 Fatty acid desaturase 66 291 1.5E-31 T 22-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 YE0023 b4dd5e3ca91de61de888fc6355a7a092 188 Pfam PF04220 Der GTPase activator (YihI) 20 178 9.0E-57 T 22-04-2016 IPR007336 Der GTPase activator YE0023 b4dd5e3ca91de61de888fc6355a7a092 188 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 182 17.363 T 22-04-2016 IPR007336 Der GTPase activator YE0010 65e9d94c745aa64d3aa1af78ecb1cb0d 321 Pfam PF02653 Branched-chain amino acid transport system / permease component 45 313 4.5E-51 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YE0010 65e9d94c745aa64d3aa1af78ecb1cb0d 321 PANTHER PTHR32196:SF21 9 321 2.3E-139 T 22-04-2016 YE0010 65e9d94c745aa64d3aa1af78ecb1cb0d 321 PANTHER PTHR32196 9 321 2.3E-139 T 22-04-2016 YE3042 de1e7de37b5ebb8c2f4f5968c8532f40 189 Pfam PF14301 Domain of unknown function (DUF4376) 76 181 1.2E-20 T 22-04-2016 IPR025484 Domain of unknown function DUF4376 YE3894 29432d0aff1240c4bde03a9ed78ea13b 68 Pfam PF03889 Domain of unknown function 9 45 1.9E-21 T 22-04-2016 IPR005589 Protein of unknown function DUF331 YE1551 2ee789a0b97f3ded5bf29a54cb366e55 297 SUPERFAMILY SSF56112 14 268 8.16E-19 T 22-04-2016 IPR011009 Protein kinase-like domain YE1551 2ee789a0b97f3ded5bf29a54cb366e55 297 Pfam PF03881 Fructosamine kinase 26 275 9.1E-10 T 22-04-2016 IPR016477 Fructosamine/Ketosamine-3-kinase YE2682 284539d9f9396d010ff767134eec7c2e 275 Pfam PF07024 ImpE protein 144 260 5.6E-41 T 22-04-2016 IPR009211 Predicted virulence protein, SciE type YE2682 284539d9f9396d010ff767134eec7c2e 275 PIRSF PIRSF029288 1 267 4.9E-90 T 22-04-2016 IPR009211 Predicted virulence protein, SciE type YE2682 284539d9f9396d010ff767134eec7c2e 275 SUPERFAMILY SSF144059 5 266 2.48E-84 T 22-04-2016 YE1902 4a20a9a06864b8e555c85dc2d03ab378 227 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 14 215 6.5E-37 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 YE1902 4a20a9a06864b8e555c85dc2d03ab378 227 PANTHER PTHR33508 4 225 7.6E-134 T 22-04-2016 YE1902 4a20a9a06864b8e555c85dc2d03ab378 227 Pfam PF01914 MarC family integral membrane protein 8 218 1.3E-63 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 YE1902 4a20a9a06864b8e555c85dc2d03ab378 227 PANTHER PTHR33508:SF2 4 225 7.6E-134 T 22-04-2016 YE3351 7d4a970b92fcf02adbb9d3b4e06306ed 138 SUPERFAMILY SSF46894 43 118 9.35E-6 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 YE3351 7d4a970b92fcf02adbb9d3b4e06306ed 138 Gene3D G3DSA:1.10.10.10 30 119 1.5E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain YE0858 9449b5e3fd5fb071c065bb6a765671b1 116 ProDom PD073252 TRANSPOSABLE STY4640 FELS-2 RETRON ORFC C0938 ELEMENT STY3664 EC67 PHAGE-RELATED 1 102 1.0E-43 T 22-04-2016 YE2141 467f63edf82aceef09d96cdf3e7c8d3d 117 SUPERFAMILY SSF141488 29 103 4.45E-23 T 22-04-2016 IPR018660 C-type lysozyme, inhibitor YE2141 467f63edf82aceef09d96cdf3e7c8d3d 117 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 34 95 3.9E-17 T 22-04-2016 IPR018660 C-type lysozyme, inhibitor YE4119 13320b6c2a9c4db925bfff3df75cf62a 394 Pfam PF02653 Branched-chain amino acid transport system / permease component 57 384 1.2E-48 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 YE4119 13320b6c2a9c4db925bfff3df75cf62a 394 PANTHER PTHR32196:SF32 240 393 4.4E-175 T 22-04-2016 YE4119 13320b6c2a9c4db925bfff3df75cf62a 394 PANTHER PTHR32196:SF32 1 184 4.4E-175 T 22-04-2016 YE4119 13320b6c2a9c4db925bfff3df75cf62a 394 PANTHER PTHR32196 240 393 4.4E-175 T 22-04-2016 YE4119 13320b6c2a9c4db925bfff3df75cf62a 394 PANTHER PTHR32196 1 184 4.4E-175 T 22-04-2016 YE1643A 20808cfdd8e6f3949c679a846dabe75c 114 Pfam PF04606 Ogr/Delta-like zinc finger 4 48 3.9E-15 T 22-04-2016 IPR007684 Zinc finger, Ogr/Delta-type YE1996 97d89b4ba484f25b36c12eb6c47e00cd 147 Pfam PF10754 Protein of unknown function (DUF2569) 7 145 4.3E-46 T 22-04-2016 IPR019690 Protein of unknown function DUF2569 YE1141 628c47f2f6cb3c08dd26d6eb325e0440 254 Pfam PF04228 Putative neutral zinc metallopeptidase 2 251 1.5E-122 T 22-04-2016 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative YE1141 628c47f2f6cb3c08dd26d6eb325e0440 254 PANTHER PTHR30168 3 254 6.2E-140 T 22-04-2016 YE3263 6225b3090af3c6c842f91ce5c954307d 86 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 9 83 7.9E-29 T 22-04-2016 IPR009778 Modulator of Rho-dependent transcription termination YE3263 6225b3090af3c6c842f91ce5c954307d 86 SUPERFAMILY SSF101744 1 84 1.67E-30 T 22-04-2016 IPR023534 Rof/RNase P-like YE1182 8db696c772ac8e789db8bc8139a711b0 295 Pfam PF07042 TrfA protein 18 144 2.3E-9 T 22-04-2016 IPR010751 Plasmid replication initiator protein TrfA YE0737 5df6d78359d6c1c7a7ed3072776c52fe 203 PANTHER PTHR30506:SF3 1 203 1.2E-96 T 22-04-2016 YE0737 5df6d78359d6c1c7a7ed3072776c52fe 203 PANTHER PTHR30506 1 203 1.2E-96 T 22-04-2016 YE0737 5df6d78359d6c1c7a7ed3072776c52fe 203 Pfam PF03458 UPF0126 domain 92 161 1.2E-19 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 YE0737 5df6d78359d6c1c7a7ed3072776c52fe 203 Pfam PF03458 UPF0126 domain 4 78 1.0E-22 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 YE3531 ee8c4e4236591074a096e2ebe9f93570 108 Pfam PF17090 Uncharacterised protein family 43 106 1.9E-11 T 22-04-2016 IPR031381 Uncharacterised protein YtcA YE1598 e61712acecab130468221249eb21565a 59 Gene3D G3DSA:1.25.40.10 1 56 9.9E-19 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 YE0180 01cddb202e5485f3c68c529edca73521 224 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 43 209 1.2E-53 T 22-04-2016 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00566 YE0180 01cddb202e5485f3c68c529edca73521 224 PANTHER PTHR34136 1 224 3.3E-97 T 22-04-2016 YE0180 01cddb202e5485f3c68c529edca73521 224 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 39 215 2.4E-73 T 22-04-2016 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00566 YE0180 01cddb202e5485f3c68c529edca73521 224 PANTHER PTHR34136:SF1 1 224 3.3E-97 T 22-04-2016 YE1969 8d4c2d9720209e7de1a1a08067d9f052 96 SUPERFAMILY SSF47598 2 44 3.0E-8 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 YE1969 8d4c2d9720209e7de1a1a08067d9f052 96 Gene3D G3DSA:1.10.1220.10 3 62 4.7E-8 T 22-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 YE1813 3f57de9c99a60c10ec2e00ef5d2b1251 131 Pfam PF16931 Putative phage holin 1 119 1.7E-19 T 22-04-2016 IPR032637 Putative phage holin-like YE0146 f2fcbeb350f3aeb780b96d73342a182b 112 Pfam PF04219 Protein of unknown function, DUF 10 98 5.6E-39 T 22-04-2016 IPR007335 Protein of unknown function DUF413 YE2323 60990a80726a66aa9698221b4d6c5aa5 370 PIRSF PIRSF034565 6 370 1.2E-170 T 22-04-2016 IPR017029 Putative phage head morphogenesis protein YE3498 d0e2c94019e62edf682b8a0c335dccb0 425 Pfam PF04917 Bacterial shufflon protein, N-terminal constant region 9 347 8.7E-137 T 22-04-2016 IPR007001 Bacterial shufflon protein, N-terminal YE0680 7194717080adb87eabf71218738b22d0 177 Hamap MF_01332 Secretion monitor [secM]. 1 177 42.595 T 22-04-2016 IPR009502 Secretion monitor GO:0045182 YE0680 7194717080adb87eabf71218738b22d0 177 PIRSF PIRSF004572 1 177 3.1E-84 T 22-04-2016 IPR009502 Secretion monitor GO:0045182 YE0680 7194717080adb87eabf71218738b22d0 177 ProDom PD089227 MONITOR PERIPLASMIC SECRETION PRECURSOR SIGNAL YACA 1 176 7.0E-80 T 22-04-2016 IPR009502 Secretion monitor GO:0045182 YE0680 7194717080adb87eabf71218738b22d0 177 Pfam PF06558 Secretion monitor precursor protein (SecM) 24 174 4.1E-58 T 22-04-2016 IPR009502 Secretion monitor GO:0045182 YE1757 7f4b0e9e8867f5c9b19c29af5e03c2ec 70 Pfam PF13996 YobH-like protein 2 63 7.0E-34 T 22-04-2016 IPR025611 YobH-like protein YE2958 1678cb2ad170a908bb2ef595304f5730 161 PANTHER PTHR30087:SF0 27 154 2.7E-39 T 22-04-2016 YE2958 1678cb2ad170a908bb2ef595304f5730 161 Pfam PF08349 Protein of unknown function (DUF1722) 41 157 5.0E-36 T 22-04-2016 IPR013560 Domain of unknown function DUF1722 YE2958 1678cb2ad170a908bb2ef595304f5730 161 PANTHER PTHR30087 27 154 2.7E-39 T 22-04-2016 YE0708 5bc65e4e6ccde054d2f3810c797cb6dd 154 Gene3D G3DSA:2.160.20.10 27 137 4.7E-20 T 22-04-2016 IPR012334 Pectin lyase fold YE0708 5bc65e4e6ccde054d2f3810c797cb6dd 154 SUPERFAMILY SSF51126 27 136 7.22E-11 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YE0871 2f9afa5aba73a5f677cd11f3fbcc9f77 150 Pfam PF05926 Phage head completion protein (GPL) 14 150 6.4E-43 T 22-04-2016 IPR009225 Bacteriophage head completion protein GpL GO:0019069 YE2976 f902f35a0a65b521433be368054a9e96 467 Pfam PF03573 outer membrane porin, OprD family 33 436 1.0E-22 T 22-04-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 YE2976 f902f35a0a65b521433be368054a9e96 467 Gene3D G3DSA:2.40.160.10 38 467 4.9E-53 T 22-04-2016 IPR023614 Porin domain YE1666 d08f55461ae5d01ebd8cc2d861ab7c76 215 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 11 212 5.9E-53 T 22-04-2016 IPR013046 Phage baseplate assembly protein V/Gp45 YE1666 d08f55461ae5d01ebd8cc2d861ab7c76 215 Pfam PF04717 Type VI secretion system, phage-baseplate injector 7 120 5.7E-37 T 22-04-2016 IPR006531 Gp5 N-terminal YE1574 e587e1ba799f0f55be85ed2947629c4a 541 Pfam PF02470 MlaD protein 36 127 6.0E-12 T 22-04-2016 IPR003399 Mce/MlaD YE1574 e587e1ba799f0f55be85ed2947629c4a 541 Pfam PF02470 MlaD protein 153 211 5.2E-6 T 22-04-2016 IPR003399 Mce/MlaD YE1574 e587e1ba799f0f55be85ed2947629c4a 541 Pfam PF02470 MlaD protein 282 384 5.8E-13 T 22-04-2016 IPR003399 Mce/MlaD YE1574 e587e1ba799f0f55be85ed2947629c4a 541 PANTHER PTHR30462 2 541 0.0 T 22-04-2016 YE1574 e587e1ba799f0f55be85ed2947629c4a 541 PANTHER PTHR30462:SF2 2 541 0.0 T 22-04-2016 YE1772 ac57ffecbb510920c1d6662f10d031be 189 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 1 184 25.991 T 22-04-2016 IPR022929 Putative manganese efflux pump MntP YE1772 ac57ffecbb510920c1d6662f10d031be 189 PANTHER PTHR35529 2 188 1.1E-80 T 22-04-2016 YE1772 ac57ffecbb510920c1d6662f10d031be 189 Pfam PF02659 Putative manganese efflux pump 31 181 7.3E-56 T 22-04-2016 IPR003810 Putative manganese efflux pump YE3082 42036d0907ae99f706a99f09f93a11a2 429 Pfam PF01943 Polysaccharide biosynthesis protein 19 286 5.2E-20 T 22-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 YE3500 a7e4840bc667e3856f1d7b2b6fb1782b 195 SUPERFAMILY SSF54523 41 195 1.02E-44 T 22-04-2016 YE3500 a7e4840bc667e3856f1d7b2b6fb1782b 195 Gene3D G3DSA:3.30.1690.10 48 195 1.5E-58 T 22-04-2016 YE3500 a7e4840bc667e3856f1d7b2b6fb1782b 195 Pfam PF08805 PilS N terminal 45 194 8.3E-34 T 22-04-2016 IPR014911 Type 4 secretion system, PilS, N-terminal YE1358 7f7ee3636e97ba03ec6152e75a800e8b 163 Pfam PF06496 Protein of unknown function (DUF1097) 8 142 3.2E-37 T 22-04-2016 IPR009476 Protein of unknown function DUF1097 YE1150 10a463caba516b3f67295be8626b9575 404 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 58 382 1.3E-22 T 22-04-2016 IPR003776 YcaO-like domain YE1644 9b0b0861880b932d07ed8a8f73dda920 369 Pfam PF05954 Phage late control gene D protein (GPD) 86 346 5.2E-24 T 22-04-2016 YE1644 9b0b0861880b932d07ed8a8f73dda920 369 SUPERFAMILY SSF69279 12 184 5.67E-27 T 22-04-2016 YE2562 13a1abdf89a642e7b10444e3a0e0a1a0 85 Pfam PF04316 Anti-sigma-28 factor, FlgM 28 76 1.7E-10 T 22-04-2016 IPR031316 Anti-sigma-28 factor FlgM, C-terminal YE2562 13a1abdf89a642e7b10444e3a0e0a1a0 85 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 10 78 1.5E-16 T 22-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 YE2562 13a1abdf89a642e7b10444e3a0e0a1a0 85 SUPERFAMILY SSF101498 12 77 1.29E-12 T 22-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 YE3502A 64a00050f736c03e43406c954c5c1a87 159 TIGRFAM TIGR03021 pilP_fam: type IV pilus biogenesis protein PilP 37 152 2.2E-29 T 22-04-2016 IPR022753 Type IV pilus biogenesis PilP YE1683 ed165477a081323b313f52b26cf8cf1a 319 SUPERFAMILY SSF52172 5 132 1.76E-5 T 22-04-2016 IPR011006 CheY-like superfamily YE1683 ed165477a081323b313f52b26cf8cf1a 319 Gene3D G3DSA:3.40.50.2300 5 130 1.2E-5 T 22-04-2016 YE1838 7cb20d10803a080be58d54e0c3f9ad3a 58 Pfam PF10753 Protein of unknown function (DUF2566) 7 58 4.2E-19 T 22-04-2016 IPR019689 Toxin GhoT/OrtT YE1569 07694f9bec843e1de85b31d883044bc3 185 Hamap MF_00906 Cell division protein ZapC [zapC]. 2 176 38.66 T 22-04-2016 IPR009809 Cell division protein ZapC YE1569 07694f9bec843e1de85b31d883044bc3 185 Pfam PF07126 Cell-division protein ZapC 3 168 3.5E-70 T 22-04-2016 IPR009809 Cell division protein ZapC YE1569 07694f9bec843e1de85b31d883044bc3 185 PIRSF PIRSF010252 1 178 2.4E-61 T 22-04-2016 IPR009809 Cell division protein ZapC YE1975 98591e17ccf138f9629b34ea7fcf25c4 70 Pfam PF05433 Glycine zipper 2TM domain 33 68 3.2E-8 T 22-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 YE1930 94457d6fc95acbd8641fb9ea2382df0b 204 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 86 202 1.3E-21 T 22-04-2016 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly YE1930 94457d6fc95acbd8641fb9ea2382df0b 204 PANTHER PTHR34413 3 202 3.0E-20 T 22-04-2016 YE1083 67d88af77054c5258a0517c0d8bf8be2 625 Gene3D G3DSA:2.60.20.10 19 119 2.4E-14 T 22-04-2016 YE3666 ba168a3a32389b277ca3473ebe23eb70 229 Hamap MF_01188 UPF0441 protein YgiB [ygiB]. 1 229 46.416 T 22-04-2016 IPR009576 Biofilm formation YgiB YE3666 ba168a3a32389b277ca3473ebe23eb70 229 Pfam PF06693 Protein of unknown function (DUF1190) 41 213 9.3E-55 T 22-04-2016 IPR009576 Biofilm formation YgiB YE3537 080adb6418f54de155d44e87563e6eb8 676 Pfam PF04888 Secretion system effector C (SseC) like family 335 673 3.9E-30 T 22-04-2016 IPR006972 Secretion system effector C, SseC-like GO:0009405 YE2599 f8460c1ef2c012932eaa057fe1663fdf 70 TIGRFAM TIGR03318 YdfZ_fam: putative selenium-binding protein YdfZ 6 70 7.8E-34 T 22-04-2016 IPR017704 Putative selenium-binding protein YdfZ YE2599 f8460c1ef2c012932eaa057fe1663fdf 70 Pfam PF14001 YdfZ protein 7 70 3.9E-34 T 22-04-2016 IPR017704 Putative selenium-binding protein YdfZ YE2645 3c93343fb9e7f4713163a4e01242be7c 168 PANTHER PTHR35011 2 168 3.1E-49 T 22-04-2016 YE2645 3c93343fb9e7f4713163a4e01242be7c 168 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 27 153 2.9E-23 T 22-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component YE2645 3c93343fb9e7f4713163a4e01242be7c 168 PANTHER PTHR35011:SF2 2 168 3.1E-49 T 22-04-2016 YE2596 12755380c599a43417e5ebee90e57fe2 177 Pfam PF10777 Inner membrane protein YlaC 1 153 3.6E-70 T 22-04-2016 IPR019713 Inner membrane protein YlaC YE3225 2cd964d948b1275b30cf8eaf07488c5b 619 SUPERFAMILY SSF53756 460 586 2.28E-6 T 22-04-2016 YE1258 03d0dffd4300023f50aa96d866037b03 103 Pfam PF12977 Domain of Unknown Function with PDB structure (DUF3861) 4 95 2.1E-35 T 22-04-2016 IPR024476 Protein of unknown function DUF3861 YE3976A be8eb8694ed21e3c78bc18733433c70f 125 Pfam PF10748 Protein of unknown function (DUF2531) 29 106 2.6E-6 T 22-04-2016 IPR019684 Protein of unknown function DUF2531 YE1816 7299cc9e88074ce996b969c12364075e 149 Pfam PF03245 Bacteriophage Rz lysis protein 29 147 4.7E-38 T 22-04-2016 IPR004929 Bacteriophage Rz lysis protein GO:0019076|GO:0019835 YE4143 932c5acb674fc88481830e97d104db34 118 Pfam PF10928 Protein of unknown function (DUF2810) 64 116 8.5E-33 T 22-04-2016 IPR021230 Protein of unknown function DUF2810 YE1647 261de74f7c065bd11a42aea4b6cb51cf 107 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 4 85 1.0E-5 T 22-04-2016 IPR019289 Bacteriophage tail protein Gp41, putative YE1595 cb76baf799ea5e40903aab05fb6a2cd0 121 Pfam PF07784 Protein of unknown function (DUF1622) 42 104 1.7E-24 T 22-04-2016 IPR012427 Protein of unknown function DUF1622 YE1595 cb76baf799ea5e40903aab05fb6a2cd0 121 PANTHER PTHR38468 2 121 3.6E-22 T 22-04-2016 YE3643 59c7ae16aa29c9ce170c8a7e99a01365 192 Pfam PF16964 Putative tight adherence pilin protein F 9 192 5.4E-43 T 22-04-2016 IPR031582 Putative tight adherence pilin protein F YE1672A 99e96e0ad231ea4c0f557b023f26d24b 128 Pfam PF05106 Phage holin family (Lysis protein S) 5 120 1.7E-13 T 22-04-2016 IPR006481 Bacteriophage lambda, GpS, holin YE0587 4972058c0e80a2b61cc9024787c3dfac 210 Pfam PF13689 Domain of unknown function (DUF4154) 69 204 1.2E-33 T 22-04-2016 IPR025293 Protein of unknown function DUF4154 YE3462 6ab7c9e62ba9c13640b07a66a1f8780a 365 Pfam PF04245 37-kD nucleoid-associated bacterial protein 12 325 8.1E-13 T 22-04-2016 IPR007358 Nucleoid-associated protein NdpA GO:0009295 YE0847 5a4db4192a652e3ab615e9b132e18b7f 255 Pfam PF04338 Protein of unknown function, DUF481 50 254 1.0E-56 T 22-04-2016 IPR007433 Protein of unknown function DUF481 YE1133 7531dcd3094de493b70065c2921b4642 354 PANTHER PTHR21716:SF19 7 353 4.9E-161 T 22-04-2016 YE1133 7531dcd3094de493b70065c2921b4642 354 PANTHER PTHR21716 7 353 4.9E-161 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like YE1133 7531dcd3094de493b70065c2921b4642 354 Pfam PF01594 Domain of unknown function DUF20 19 345 6.8E-80 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like YE0576 de00e97e6363525f20926581f8a9c9b1 225 Pfam PF10144 Bacterial virulence factor haemolysin 1 162 2.9E-67 T 22-04-2016 IPR019305 Uncharacterised protein family Smp YE2043 b152bd4fe5758ee8c18f0ab963895fd0 230 PANTHER PTHR30133 1 228 2.4E-83 T 22-04-2016 YE2043 b152bd4fe5758ee8c18f0ab963895fd0 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 219 1.8E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE2043 b152bd4fe5758ee8c18f0ab963895fd0 230 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 6 114 9.6E-17 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 YE2043 b152bd4fe5758ee8c18f0ab963895fd0 230 Gene3D G3DSA:1.10.3720.10 5 219 1.5E-36 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YE2043 b152bd4fe5758ee8c18f0ab963895fd0 230 SUPERFAMILY SSF161098 7 205 7.33E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 YEP0042 da8192a4115491bc6b3066178e3b17c7 115 Pfam PF04220 Der GTPase activator (YihI) 51 115 1.2E-20 T 22-04-2016 IPR007336 Der GTPase activator YE1910 19abe2d65c53eeb0d4d1f52bc89e2eae 70 Pfam PF13619 KTSC domain 7 64 7.9E-24 T 22-04-2016 IPR025309 KTSC domain YE2363 f560f27498533d2a1d690cc43a306fbb 82 Pfam PF06806 Putative excisionase (DUF1233) 4 73 2.1E-32 T 22-04-2016 IPR009634 Bacteriophage 933W, Xis excisionase YE3650 f9913904998745307cecc2fafecd9c34 679 Gene3D G3DSA:2.160.20.10 252 440 1.5E-8 T 22-04-2016 IPR012334 Pectin lyase fold YE3650 f9913904998745307cecc2fafecd9c34 679 Gene3D G3DSA:2.160.20.10 61 211 1.5E-8 T 22-04-2016 IPR012334 Pectin lyase fold YE3650 f9913904998745307cecc2fafecd9c34 679 SUPERFAMILY SSF51126 41 380 4.3E-13 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor YE3456 fe8cde43354ea581ddc0f7622c1ea597 79 PANTHER PTHR32552:SF34 1 73 8.8E-32 T 22-04-2016 YE3456 fe8cde43354ea581ddc0f7622c1ea597 79 PANTHER PTHR32552 1 73 8.8E-32 T 22-04-2016 YE1952a c9f0e5903e241f524b1962791136ac98 72 Pfam PF04606 Ogr/Delta-like zinc finger 3 48 1.9E-17 T 22-04-2016 IPR007684 Zinc finger, Ogr/Delta-type YE2677 28590878da67a667f5c6b2ca5d542e6c 279 SUPERFAMILY SSF51366 86 261 1.88E-20 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 YE2677 28590878da67a667f5c6b2ca5d542e6c 279 SUPERFAMILY SSF51366 37 55 1.88E-20 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 YE2677 28590878da67a667f5c6b2ca5d542e6c 279 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 185 264 1.5E-4 T 22-04-2016 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9|UniPathway: UPA00629 YE2677 28590878da67a667f5c6b2ca5d542e6c 279 Gene3D G3DSA:3.20.20.70 24 261 9.3E-19 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 YE3484 b057b35b134bdffbd548bcf393505be4 485 Pfam PF03743 Bacterial conjugation TrbI-like protein 348 460 4.8E-5 T 22-04-2016 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI YE3484 b057b35b134bdffbd548bcf393505be4 485 TIGRFAM TIGR03752 conj_TIGR03752: integrating conjugative element protein, PFL_4705 family 3 474 1.9E-175 T 22-04-2016 IPR021207 Integrating conjugative element protein, PFL4705 YE3095 e16718f89fdb715e571a2a4bd416a224 178 Pfam PF07445 Primosomal replication protein priC 9 175 1.4E-53 T 22-04-2016 IPR010890 Primosomal replication PriB/PriC YE3495 a5b1159ff3c88e1cfe5a34c80dbf2d18 255 TIGRFAM TIGR03759 conj_TIGR03759: integrating conjugative element protein, PFL_4693 family 60 250 5.0E-80 T 22-04-2016 IPR022293 Integrating conjugative element protein, PFL4693 YE0546 57678b896742ba6b36f8da4cb0d0b801 477 SUPERFAMILY SSF53756 117 428 2.43E-12 T 22-04-2016 YE3213 0a28ed9fc426320e6bc88abeb8c3e80b 75 Pfam PF04400 Protein of unknown function (DUF539) 23 65 1.4E-22 T 22-04-2016 IPR007495 (Na+)-NQR maturation factor NqrM YE3213 0a28ed9fc426320e6bc88abeb8c3e80b 75 PANTHER PTHR40691 3 75 5.8E-30 T 22-04-2016 YE1693 bb46ec2cb85e80797b1a19eae7089d49 323 SUPERFAMILY SSF52980 257 323 1.39E-5 T 22-04-2016 IPR011335 Restriction endonuclease type II-like YE2315 a9a4706a2f6e4473a3d22c2b03dad882 103 Pfam PF08748 Phage tail assembly chaperone 1 103 2.1E-24 T 22-04-2016 IPR014859 Phage tail assembly chaperone YE0983 e709d58f24ab2e5eb0fc22710e8fe3cb 213 Pfam PF15947 Domain of unknown function (DUF4755) 78 208 1.1E-30 T 22-04-2016 IPR031863 Protein of unknown function DUF4755 YE1623 11a8730a2c929309508b5cd96523cc53 84 Pfam PF13991 BssS protein family 11 80 1.1E-38 T 22-04-2016 IPR025730 Biofilm regulator BssS YE1623 11a8730a2c929309508b5cd96523cc53 84 ProDom PD060858 YCEP CYTOPLASMIC STY1199 ESCHERICHIA COLI SIMILAR ECS1438 1 84 3.0E-39 T 22-04-2016 IPR025730 Biofilm regulator BssS YE4154 bb1b29b83b17b53467bb5a5f50ab958f 484 SUPERFAMILY SSF55729 389 482 7.49E-5 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE4154 bb1b29b83b17b53467bb5a5f50ab958f 484 Gene3D G3DSA:3.40.630.30 383 481 1.6E-5 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase YE3239 84c213d3304523c2aad629450f54c7ce 113 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 6 105 6.8E-16 T 22-04-2016 IPR008407 Branched-chain amino acid transport, AzlD YE1172 135ea27b019cdd85264ffcbe552ff382 668 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 173 317 1.4E-9 T 22-04-2016 IPR000477 Reverse transcriptase domain YE2036 ac4b85957642e62e036a4a8a1d235e13 390 Gene3D G3DSA:1.10.287.110 250 289 6.7E-4 T 22-04-2016 IPR001623 DnaJ domain YE2036 ac4b85957642e62e036a4a8a1d235e13 390 SUPERFAMILY SSF46565 249 289 1.57E-5 T 22-04-2016 IPR001623 DnaJ domain YE3503 798794f4c458c76f4bb917109ba6474f 435 Pfam PF06864 Pilin accessory protein (PilO) 24 433 4.5E-63 T 22-04-2016 IPR009663 Pilin accessory predicted YE2995 0e3eadea702dc7bd6bef131ebe254d42 160 Pfam PF07295 Zinc-ribbon containing domain 14 157 1.3E-54 T 22-04-2016 IPR009912 Zinc-ribbon containing domain YE2305 d1d4ee15001bcdb75674002535a4d7c0 137 Pfam PF10711 Hypothetical protein (DUF2513) 3 111 1.6E-8 T 22-04-2016 IPR019650 Protein of unknown function DUF2513 YE2293 ab5739de596def70cb884c9b94fc486f 603 SUPERFAMILY SSF88874 294 458 2.43E-5 T 22-04-2016 YE3770 ab80a843cd603f9e6609767a6a97a4f0 309 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 1 306 1.7E-90 T 22-04-2016 IPR007296 Domain of unknown function DUF403 YE3770 ab80a843cd603f9e6609767a6a97a4f0 309 PANTHER PTHR34595 1 308 4.7E-86 T 22-04-2016 YE0519 8e8cb119b56dde74de67b582fc3c3b8e 254 Pfam PF13391 HNH endonuclease 147 198 7.8E-11 T 22-04-2016 IPR003615 HNH nuclease YE0004 a8ce8a52d5b7dc143739f4d8c3ea147f 223 Pfam PF07077 Protein of unknown function (DUF1345) 39 213 5.5E-55 T 22-04-2016 IPR009781 Protein of unknown function DUF1345 YE1832 cb44ff17b66a99bc358c8a442207e91d 74 Pfam PF10769 Protein of unknown function (DUF2594) 1 74 3.4E-38 T 22-04-2016 IPR019705 Protein of unknown function DUF2594 YE0479 dac8404fe6126fcbe5e6bb26d3150757 367 Pfam PF15984 Bacterial collagen, middle region 112 295 3.8E-40 T 22-04-2016 IPR031929 Bacterial collagen-like protein, middle domain YE1906 94b5da767428b400cb74bed48a485671 78 Gene3D G3DSA:1.10.150.20 9 45 2.2E-4 T 22-04-2016 YE3466 107a6e554d7fe6ccf2db3d9c25acd41a 468 TIGRFAM TIGR03755 conj_TIGR03755: integrating conjugative element protein, PFL_4711 family 41 463 1.5E-168 T 22-04-2016 IPR021204 Integrating conjugative element protein, PFL4711 YE3564 a8a6827db70769492aba8188f998ca78 180 Pfam PF11356 Type II secretion system protein C 57 179 1.2E-15 T 22-04-2016 IPR024961 Type II secretion system protein C, N-terminal YE3314 fa4b8ee3476328b030074ba46215011b 155 Pfam PF10713 Protein of unknown function (DUF2509) 18 154 1.3E-43 T 22-04-2016 IPR019652 Protein of unknown function DUF2509 YE0679 73666d8615287da9f2340a176e1c105b 176 Pfam PF05258 Protein of unknown function (DUF721) 28 100 1.1E-13 T 22-04-2016 IPR007922 Protein of unknown function DUF721/UPF0232 YE2317 b5bf7b987d2b1f6730aefd7fbcf79d94 135 Pfam PF13554 Bacteriophage related domain of unknown function 5 130 1.8E-36 T 22-04-2016 IPR025395 Protein of unknown function DUF4128 YE3350 2e21f95b917b0e00794cb01bd35c3436 173 Pfam PF11356 Type II secretion system protein C 93 170 3.8E-11 T 22-04-2016 IPR024961 Type II secretion system protein C, N-terminal YE0861 e82de91bf8849cc590d0167ecc06541f 861 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 197 578 2.6E-118 T 22-04-2016 IPR008766 Replication gene A protein GO:0006260 YE3355 46c427799ee5609ae4c7dfed24d6bc64 101 Pfam PF13591 MerR HTH family regulatory protein 9 92 2.0E-24 T 22-04-2016 YE3977A 3896833753793f49852e6fcfcc0931d9 182 Pfam PF05137 Fimbrial assembly protein (PilN) 101 162 6.9E-10 T 22-04-2016 IPR007813 Fimbrial assembly PilN