locus-tag class description YE105_RS00005 PF00258 Flavodoxin YE105_RS00010 PF01037 Lrp/AsnC ligand binding domain YE105_RS00015 PF03590 Aspartate-ammonia ligase YE105_RS00025 PF05762 VWA domain containing CoxE-like protein YE105_RS00030 PF12592 Protein of unknown function (DUF3763) YE105_RS00030 PF07728 AAA domain (dynein-related subfamily) YE105_RS00030 PF17868 AAA lid domain YE105_RS00035 PF02705 K+ potassium transporter YE105_RS00040 PF05025 RbsD / FucU transport protein family YE105_RS00045 PF00005 ABC transporter YE105_RS00050 PF02653 Branched-chain amino acid transport system / permease component YE105_RS00055 PF13407 Periplasmic binding protein domain YE105_RS00060 PF00294 pfkB family carbohydrate kinase YE105_RS00065 PF00356 Bacterial regulatory proteins, lacI family YE105_RS00070 PF07690 Major Facilitator Superfamily YE105_RS00075 PF07729 FCD domain YE105_RS00075 PF00392 Bacterial regulatory proteins, gntR family YE105_RS00105 PF00665 Integrase core domain YE105_RS00105 PF13333 Integrase core domain YE105_RS00105 PF13276 HTH-like domain YE105_RS00110 PF03205 Molybdopterin guanine dinucleotide synthesis protein B YE105_RS00115 PF12804 MobA-like NTP transferase domain YE105_RS00120 PF06288 Protein of unknown function (DUF1040) YE105_RS00125 PF01636 Phosphotransferase enzyme family YE105_RS00130 PF01323 DSBA-like thioredoxin domain YE105_RS00135 PF01612 3'-5' exonuclease YE105_RS00135 PF00476 DNA polymerase family A YE105_RS00135 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain YE105_RS00135 PF01367 5'-3' exonuclease, C-terminal SAM fold YE105_RS00140 PF01926 50S ribosome-binding GTPase YE105_RS00145 PF04220 Der GTPase activator (YihI) YE105_RS00150 PF06969 HemN C-terminal domain YE105_RS00150 PF04055 Radical SAM superfamily YE105_RS00155 PF00158 Sigma-54 interaction domain YE105_RS00155 PF02954 Bacterial regulatory protein, Fis family YE105_RS00155 PF00072 Response regulator receiver domain YE105_RS00160 PF00512 His Kinase A (phospho-acceptor) domain YE105_RS00160 PF00989 PAS fold YE105_RS00160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YE105_RS00170 PF03951 Glutamine synthetase, beta-Grasp domain YE105_RS00170 PF00120 Glutamine synthetase, catalytic domain YE105_RS00175 PF00009 Elongation factor Tu GTP binding domain YE105_RS00175 PF00679 Elongation factor G C-terminus YE105_RS00175 PF03144 Elongation factor Tu domain 2 YE105_RS00180 PF13419 Haloacid dehalogenase-like hydrolase YE105_RS00185 PF03631 Virulence factor BrkB YE105_RS00190 PF02580 D-Tyr-tRNA(Tyr) deacylase YE105_RS00195 PF00583 Acetyltransferase (GNAT) family YE105_RS00195 PF09500 Putative thioesterase (yiiD_Cterm) YE105_RS00200 PF13693 Winged helix-turn-helix DNA-binding YE105_RS00220 PF05170 AsmA family YE105_RS00225 PF00860 Permease family YE105_RS00230 PF03616 Sodium/glutamate symporter YE105_RS00240 PF00270 DEAD/DEAH box helicase YE105_RS00240 PF17191 RecG wedge domain YE105_RS00240 PF00271 Helicase conserved C-terminal domain YE105_RS00245 PF00588 SpoU rRNA Methylase family YE105_RS00245 PF12105 SpoU, rRNA methylase, C-terminal YE105_RS00250 PF13291 ACT domain YE105_RS00250 PF04607 Region found in RelA / SpoT proteins YE105_RS00250 PF02824 TGS domain YE105_RS00255 PF01192 RNA polymerase Rpb6 YE105_RS00260 PF00625 Guanylate kinase YE105_RS00265 PF03120 NAD-dependent DNA ligase OB-fold domain YE105_RS00265 PF01653 NAD-dependent DNA ligase adenylation domain YE105_RS00270 PF03458 UPF0126 domain YE105_RS00280 PF07670 Nucleoside recognition YE105_RS00280 PF07662 Na+ dependent nucleoside transporter C-terminus YE105_RS00280 PF01773 Na+ dependent nucleoside transporter N-terminus YE105_RS00285 PF00378 Enoyl-CoA hydratase/isomerase YE105_RS00290 PF00990 Diguanylate cyclase, GGDEF domain YE105_RS00290 PF13426 PAS domain YE105_RS00290 PF00563 EAL domain YE105_RS00305 PF03755 YicC-like family, N-terminal region YE105_RS00305 PF08340 Domain of unknown function (DUF1732) YE105_RS00310 PF03725 3' exoribonuclease family, domain 2 YE105_RS00310 PF01138 3' exoribonuclease family, domain 1 YE105_RS00315 PF00156 Phosphoribosyl transferase domain YE105_RS00320 PF00440 Bacterial regulatory proteins, tetR family YE105_RS00325 PF00692 dUTPase YE105_RS00330 PF02441 Flavoprotein YE105_RS00330 PF04127 DNA / pantothenate metabolism flavoprotein YE105_RS00335 PF04002 RadC-like JAB domain YE105_RS00340 PF00830 Ribosomal L28 family YE105_RS00345 PF00471 Ribosomal protein L33 YE105_RS00350 PF06827 Zinc finger found in FPG and IleRS YE105_RS00350 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain YE105_RS00350 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain YE105_RS00355 PF01467 Cytidylyltransferase-like YE105_RS00360 PF00535 Glycosyl transferase family 2 YE105_RS00365 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) YE105_RS00370 PF01075 Glycosyltransferase family 9 (heptosyltransferase) YE105_RS00375 PF01075 Glycosyltransferase family 9 (heptosyltransferase) YE105_RS00380 PF01370 NAD dependent epimerase/dehydratase family YE105_RS00385 PF00155 Aminotransferase class I and II YE105_RS00390 PF00107 Zinc-binding dehydrogenase YE105_RS00390 PF08240 Alcohol dehydrogenase GroES-like domain YE105_RS00410 PF04748 Divergent polysaccharide deacetylase YE105_RS00415 PF01551 Peptidase family M23 YE105_RS00420 PF01676 Metalloenzyme superfamily YE105_RS00420 PF06415 BPG-independent PGAM N-terminus (iPGM_N) YE105_RS00425 PF00581 Rhodanese-like domain YE105_RS00430 PF00462 Glutaredoxin YE105_RS00435 PF02556 Preprotein translocase subunit SecB YE105_RS00440 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus YE105_RS00440 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus YE105_RS00445 PF00132 Bacterial transferase hexapeptide (six repeats) YE105_RS00445 PF06426 Serine acetyltransferase, N-terminal YE105_RS00450 PF00588 SpoU rRNA Methylase family YE105_RS00455 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain YE105_RS00455 PF02805 Metal binding domain of Ada YE105_RS00455 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain YE105_RS00455 PF12833 Helix-turn-helix domain YE105_RS00460 PF00512 His Kinase A (phospho-acceptor) domain YE105_RS00460 PF16527 Two-component sensor protein CpxA, periplasmic domain YE105_RS00460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YE105_RS00460 PF00672 HAMP domain YE105_RS00465 PF00486 Transcriptional regulatory protein, C terminal YE105_RS00465 PF00072 Response regulator receiver domain YE105_RS00470 PF07813 LTXXQ motif family protein YE105_RS00475 PF16916 Dimerisation domain of Zinc Transporter YE105_RS00475 PF01545 Cation efflux family YE105_RS00480 PF00365 Phosphofructokinase YE105_RS00495 PF00121 Triosephosphate isomerase YE105_RS00500 PF07305 Protein of unknown function (DUF1454) YE105_RS00505 PF05656 Protein of unknown function (DUF805) YE105_RS00510 PF00970 Oxidoreductase FAD-binding domain YE105_RS00510 PF00175 Oxidoreductase NAD-binding domain YE105_RS00525 PF07690 Major Facilitator Superfamily YE105_RS00530 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded YE105_RS00535 PF02782 FGGY family of carbohydrate kinases, C-terminal domain YE105_RS00535 PF00370 FGGY family of carbohydrate kinases, N-terminal domain YE105_RS00540 PF00230 Major intrinsic protein YE105_RS00545 PF06005 Cell division protein ZapB YE105_RS00550 PF03737 Aldolase/RraA YE105_RS00555 PF01040 UbiA prenyltransferase family YE105_RS00560 PF00004 ATPase family associated with various cellular activities (AAA) YE105_RS00560 PF10431 C-terminal, D2-small domain, of ClpB protein YE105_RS00560 PF07724 AAA domain (Cdc48 subfamily) YE105_RS00565 PF00227 Proteasome subunit YE105_RS00570 PF05036 Sporulation related domain YE105_RS00575 PF00356 Bacterial regulatory proteins, lacI family YE105_RS00580 PF18319 PriA DNA helicase Cys-rich region (CRR) domain YE105_RS00580 PF18074 Primosomal protein N C-terminal domain YE105_RS00580 PF17764 3′ DNA-binding domain (3′BD) YE105_RS00580 PF00271 Helicase conserved C-terminal domain YE105_RS00580 PF00270 DEAD/DEAH box helicase YE105_RS00585 PF01197 Ribosomal protein L31 YE105_RS00590 PF01340 Met Apo-repressor, MetJ YE105_RS00595 PF01053 Cys/Met metabolism PLP-dependent enzyme YE105_RS00600 PF00696 Amino acid kinase family YE105_RS00600 PF00742 Homoserine dehydrogenase YE105_RS00600 PF03447 Homoserine dehydrogenase, NAD binding domain YE105_RS00605 PF02219 Methylenetetrahydrofolate reductase YE105_RS00610 PF00311 Phosphoenolpyruvate carboxylase YE105_RS00615 PF01546 Peptidase family M20/M25/M40 YE105_RS00615 PF07687 Peptidase dimerisation domain YE105_RS00620 PF02774 Semialdehyde dehydrogenase, dimerisation domain YE105_RS00620 PF01118 Semialdehyde dehydrogenase, NAD binding domain YE105_RS00625 PF00696 Amino acid kinase family YE105_RS00630 PF00206 Lyase YE105_RS00630 PF14698 Argininosuccinate lyase C-terminal YE105_RS00635 PF07715 TonB-dependent Receptor Plug Domain YE105_RS00635 PF00593 TonB dependent receptor YE105_RS00655 PF00664 ABC transporter transmembrane region YE105_RS00655 PF00005 ABC transporter YE105_RS00660 PF00529 HlyD membrane-fusion protein of T1SS YE105_RS00670 PF07992 Pyridine nucleotide-disulphide oxidoreductase YE105_RS00670 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YE105_RS00675 PF00462 Glutaredoxin YE105_RS00675 PF08534 Redoxin YE105_RS00680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YE105_RS00680 PF03466 LysR substrate binding domain YE105_RS00685 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YE105_RS00685 PF07992 Pyridine nucleotide-disulphide oxidoreductase YE105_RS00690 PF00440 Bacterial regulatory proteins, tetR family YE105_RS00695 PF07226 Protein of unknown function (DUF1422) YE105_RS00700 PF05958 tRNA (Uracil-5-)-methyltransferase YE105_RS00705 PF00593 TonB dependent receptor YE105_RS00705 PF07715 TonB-dependent Receptor Plug Domain YE105_RS00710 PF01177 Asp/Glu/Hydantoin racemase YE105_RS00750 PF13407 Periplasmic binding protein domain YE105_RS00755 PF00005 ABC transporter YE105_RS00760 PF02653 Branched-chain amino acid transport system / permease component YE105_RS00765 PF02653 Branched-chain amino acid transport system / permease component YE105_RS00770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YE105_RS00770 PF03466 LysR substrate binding domain YE105_RS00775 PF04219 Protein of unknown function, DUF YE105_RS00780 PF13335 Magnesium chelatase, subunit ChlI C-terminal YE105_RS00780 PF01078 Magnesium chelatase, subunit ChlI YE105_RS00785 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YE105_RS00785 PF00205 Thiamine pyrophosphate enzyme, central domain YE105_RS00785 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YE105_RS00795 PF01063 Amino-transferase class IV YE105_RS00800 PF00920 Dehydratase family YE105_RS00805 PF00291 Pyridoxal-phosphate dependent enzyme YE105_RS00805 PF00585 C-terminal regulatory domain of Threonine dehydratase YE105_RS00820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YE105_RS00820 PF03466 LysR substrate binding domain YE105_RS00825 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain YE105_RS00825 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain YE105_RS00830 PF06958 S-type Pyocin YE105_RS00835 PF01320 Colicin immunity protein / pyocin immunity protein YE105_RS00840 PF01320 Colicin immunity protein / pyocin immunity protein YE105_RS00850 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain YE105_RS00850 PF02753 Pili assembly chaperone PapD, C-terminal domain YE105_RS00860 PF00577 Outer membrane usher protein YE105_RS00860 PF13954 PapC N-terminal domain YE105_RS00860 PF13953 PapC C-terminal domain YE105_RS00865 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain YE105_RS00865 PF02753 Pili assembly chaperone PapD, C-terminal domain YE105_RS00880 PF13361 UvrD-like helicase C-terminal domain YE105_RS00880 PF00580 UvrD/REP helicase N-terminal domain YE105_RS00885 PF00295 Glycosyl hydrolases family 28 YE105_RS00890 PF02541 Ppx/GppA phosphatase family YE105_RS00895 PF00271 Helicase conserved C-terminal domain YE105_RS00895 PF00270 DEAD/DEAH box helicase YE105_RS00900 PF00085 Thioredoxin YE105_RS00905 PF07498 Rho termination factor, N-terminal domain YE105_RS00905 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain YE105_RS00905 PF07497 Rho termination factor, RNA-binding domain YE105_RS00910 PF00953 Glycosyl transferase family 4 YE105_RS00915 PF02706 Chain length determinant protein YE105_RS00920 PF02350 UDP-N-acetylglucosamine 2-epimerase YE105_RS00925 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain YE105_RS00925 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain YE105_RS00925 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain YE105_RS00930 PF16363 GDP-mannose 4,6 dehydratase YE105_RS00935 PF00483 Nucleotidyl transferase YE105_RS00945 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family YE105_RS00950 PF01943 Polysaccharide biosynthesis protein YE105_RS00955 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 YE105_RS00960 PF06899 WzyE protein, O-antigen assembly polymerase YE105_RS00965 PF03808 Glycosyl transferase WecB/TagA/CpsF family YE105_RS00970 PF00324 Amino acid permease YE105_RS01000 PF07719 Tetratricopeptide repeat YE105_RS01000 PF07219 HemY protein N-terminus YE105_RS01005 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase YE105_RS01010 PF02602 Uroporphyrinogen-III synthase HemD YE105_RS01015 PF03900 Porphobilinogen deaminase, C-terminal domain YE105_RS01015 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain YE105_RS01020 PF01295 Adenylate cyclase, class-I YE105_RS01020 PF12633 Adenylate cyclase NT domain YE105_RS01025 PF01491 Frataxin-like domain YE105_RS01030 PF13627 Prokaryotic lipoprotein-attachment site YE105_RS01035 PF01678 Diaminopimelate epimerase YE105_RS01040 PF04340 Protein of unknown function, DUF484 YE105_RS01045 PF02899 Phage integrase, N-terminal SAM-like domain YE105_RS01045 PF00589 Phage integrase family YE105_RS01050 PF13419 Haloacid dehalogenase-like hydrolase YE105_RS01055 PF00580 UvrD/REP helicase N-terminal domain YE105_RS01055 PF13361 UvrD-like helicase C-terminal domain YE105_RS01070 PF09370 Phosphoenolpyruvate hydrolase-like YE105_RS01075 PF01544 CorA-like Mg2+ transporter protein YE105_RS01080 PF00892 EamA-like transporter family YE105_RS01085 PF03061 Thioesterase superfamily YE105_RS01090 PF02253 Phospholipase A1 YE105_RS01095 PF00570 HRDC domain YE105_RS01095 PF00270 DEAD/DEAH box helicase YE105_RS01095 PF00271 Helicase conserved C-terminal domain YE105_RS01095 PF09382 RQC domain YE105_RS01095 PF16124 RecQ zinc-binding YE105_RS01100 PF01810 LysE type translocator YE105_RS01105 PF01810 LysE type translocator YE105_RS01110 PF12146 Serine aminopeptidase, S33 YE105_RS01120 PF03009 Glycerophosphoryl diester phosphodiesterase family YE105_RS01125 PF07690 Major Facilitator Superfamily YE105_RS01130 PF04324 BFD-like [2Fe-2S] binding domain YE105_RS01130 PF01266 FAD dependent oxidoreductase YE105_RS01135 PF00890 FAD binding domain YE105_RS01140 PF13183 4Fe-4S dicluster domain YE105_RS01140 PF02754 Cysteine-rich domain YE105_RS01145 PF08786 DcrB YE105_RS01150 PF02592 Putative vitamin uptake transporter YE105_RS01155 PF01206 Sulfurtransferase TusA YE105_RS01160 PF00403 Heavy-metal-associated domain YE105_RS01165 PF07947 YhhN family YE105_RS01180 PF06611 Protein of unknown function (DUF1145) YE105_RS01190 PF02881 SRP54-type protein, helical bundle domain YE105_RS01190 PF00448 SRP54-type protein, GTPase domain YE105_RS01195 PF00005 ABC transporter YE105_RS01200 PF18075 FtsX extracellular domain YE105_RS01200 PF02687 FtsX-like permease family YE105_RS01205 PF00140 Sigma-70 factor, region 1.2 YE105_RS01205 PF04545 Sigma-70, region 4 YE105_RS01205 PF04542 Sigma-70 region 2 YE105_RS01220 PF12568 Acetyltransferase (GNAT) domain, PanZ YE105_RS01225 PF13458 Periplasmic binding protein YE105_RS01230 PF02653 Branched-chain amino acid transport system / permease component YE105_RS01235 PF02653 Branched-chain amino acid transport system / permease component YE105_RS01235 PF11862 Domain of unknown function (DUF3382) YE105_RS01240 PF00005 ABC transporter YE105_RS01240 PF12399 Branched-chain amino acid ATP-binding cassette transporter YE105_RS01245 PF00005 ABC transporter YE105_RS01280 PF13416 Bacterial extracellular solute-binding protein YE105_RS01285 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS01290 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS01295 PF00005 ABC transporter YE105_RS01295 PF17912 MalK OB fold domain YE105_RS01300 PF03009 Glycerophosphoryl diester phosphodiesterase family YE105_RS01305 PF03547 Membrane transport protein YE105_RS01310 PF00892 EamA-like transporter family YE105_RS01315 PF03466 LysR substrate binding domain YE105_RS01315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YE105_RS01320 PF08267 Cobalamin-independent synthase, N-terminal domain YE105_RS01320 PF01717 Cobalamin-independent synthase, Catalytic domain YE105_RS01325 PF01738 Dienelactone hydrolase family YE105_RS01330 PF01048 Phosphorylase superfamily YE105_RS01350 PF02554 Carbon starvation protein CstA YE105_RS01350 PF13722 5TM C-terminal transporter carbon starvation CstA YE105_RS01355 PF09335 SNARE associated Golgi protein YE105_RS01360 PF02646 RmuC family YE105_RS01365 PF01209 ubiE/COQ5 methyltransferase family YE105_RS01370 PF02036 SCP-2 sterol transfer family YE105_RS01375 PF03109 ABC1 family YE105_RS01380 PF02416 mttA/Hcf106 family YE105_RS01390 PF00902 Sec-independent protein translocase protein (TatC) YE105_RS01395 PF01026 TatD related DNase YE105_RS01400 PF00490 Delta-aminolevulinic acid dehydratase YE105_RS01405 PF02357 Transcription termination factor nusG YE105_RS01410 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YE105_RS01415 PF00175 Oxidoreductase NAD-binding domain YE105_RS01415 PF00970 Oxidoreductase FAD-binding domain YE105_RS01420 PF02803 Thiolase, C-terminal domain YE105_RS01420 PF00108 Thiolase, N-terminal domain YE105_RS01425 PF00378 Enoyl-CoA hydratase/isomerase YE105_RS01425 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain YE105_RS01425 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YE105_RS01430 PF00557 Metallopeptidase family M24 YE105_RS01435 PF01205 Uncharacterized protein family UPF0029 YE105_RS01435 PF09186 Domain of unknown function (DUF1949) YE105_RS01440 PF02386 Cation transport protein YE105_RS01445 PF12724 Flavodoxin domain YE105_RS01480 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain YE105_RS01480 PF01565 FAD binding domain YE105_RS01485 PF02237 Biotin protein ligase C terminal domain YE105_RS01485 PF03099 Biotin/lipoate A/B protein ligase family YE105_RS01485 PF08279 HTH domain YE105_RS01490 PF00485 Phosphoribulokinase / Uridine kinase family YE105_RS01495 PF13673 Acetyltransferase (GNAT) domain YE105_RS01520 PF03144 Elongation factor Tu domain 2 YE105_RS01520 PF00009 Elongation factor Tu GTP binding domain YE105_RS01520 PF03143 Elongation factor Tu C-terminal domain YE105_RS01525 PF00584 SecE/Sec61-gamma subunits of protein translocation complex YE105_RS01530 PF02357 Transcription termination factor nusG YE105_RS01530 PF00467 KOW motif YE105_RS01535 PF03946 Ribosomal protein L11, N-terminal domain YE105_RS01535 PF00298 Ribosomal protein L11, RNA binding domain YE105_RS01540 PF00687 Ribosomal protein L1p/L10e family YE105_RS01545 PF00466 Ribosomal protein L10 YE105_RS01550 PF00542 Ribosomal protein L7/L12 C-terminal domain YE105_RS01550 PF16320 Ribosomal protein L7/L12 dimerisation domain YE105_RS01555 PF04565 RNA polymerase Rpb2, domain 3 YE105_RS01555 PF10385 RNA polymerase beta subunit external 1 domain YE105_RS01555 PF00562 RNA polymerase Rpb2, domain 6 YE105_RS01555 PF04561 RNA polymerase Rpb2, domain 2 YE105_RS01555 PF04563 RNA polymerase beta subunit YE105_RS01555 PF04560 RNA polymerase Rpb2, domain 7 YE105_RS01560 PF05000 RNA polymerase Rpb1, domain 4 YE105_RS01560 PF00623 RNA polymerase Rpb1, domain 2 YE105_RS01560 PF04983 RNA polymerase Rpb1, domain 3 YE105_RS01560 PF04997 RNA polymerase Rpb1, domain 1 YE105_RS01560 PF04998 RNA polymerase Rpb1, domain 5 YE105_RS01575 PF04055 Radical SAM superfamily YE105_RS01575 PF06968 Biotin and Thiamin Synthesis associated domain YE105_RS01580 PF05690 Thiazole biosynthesis protein ThiG YE105_RS01585 PF02597 ThiS family YE105_RS01590 PF00899 ThiF family YE105_RS01595 PF02581 Thiamine monophosphate synthase YE105_RS01600 PF01964 Radical SAM ThiC family YE105_RS01600 PF13667 ThiC-associated domain YE105_RS01605 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ YE105_RS01610 PF00293 NUDIX domain YE105_RS01610 PF09297 NADH pyrophosphatase zinc ribbon domain YE105_RS01615 PF01208 Uroporphyrinogen decarboxylase (URO-D) YE105_RS01620 PF04493 Endonuclease V YE105_RS01625 PF04222 Protein of unknown function (DUF416) YE105_RS01630 PF00216 Bacterial DNA-binding protein YE105_RS01635 PF07356 Protein of unknown function (DUF1481) YE105_RS01640 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain YE105_RS01640 PF02843 Phosphoribosylglycinamide synthetase, C domain YE105_RS01640 PF02844 Phosphoribosylglycinamide synthetase, N domain YE105_RS01645 PF02142 MGS-like domain YE105_RS01645 PF01808 AICARFT/IMPCHase bienzyme YE105_RS01685 PF00474 Sodium:solute symporter family YE105_RS01690 PF04341 Protein of unknown function, DUF485 YE105_RS01695 PF00501 AMP-binding enzyme YE105_RS01695 PF13193 AMP-binding enzyme C-terminal domain YE105_RS01695 PF16177 Acetyl-coenzyme A synthetase N-terminus YE105_RS01700 PF00375 Sodium:dicarboxylate symporter family YE105_RS01705 PF00196 Bacterial regulatory proteins, luxR family YE105_RS01705 PF00072 Response regulator receiver domain YE105_RS01710 PF00512 His Kinase A (phospho-acceptor) domain YE105_RS01710 PF00672 HAMP domain YE105_RS01710 PF01627 Hpt domain YE105_RS01710 PF00072 Response regulator receiver domain YE105_RS01710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YE105_RS01710 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) YE105_RS01720 PF00263 Bacterial type II and III secretion system protein YE105_RS01720 PF03958 Bacterial type II/III secretion system short domain YE105_RS01750 PF04888 Secretion system effector C (SseC) like family YE105_RS01775 PF14525 AraC-binding-like domain YE105_RS01775 PF12833 Helix-turn-helix domain YE105_RS01795 PF01514 Secretory protein of YscJ/FliF family YE105_RS01810 PF07201 HrpJ-like domain YE105_RS01820 PF00771 FHIPEP family YE105_RS01825 PF18269 T3SS EscN ATPase C-terminal domain YE105_RS01825 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain YE105_RS01840 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term YE105_RS01845 PF00813 FliP family YE105_RS01850 PF01313 Bacterial export proteins, family 3 YE105_RS01855 PF01311 Bacterial export proteins, family 1 YE105_RS01860 PF01312 FlhB HrpN YscU SpaS Family YE105_RS01865 PF04143 Sulphur transport YE105_RS01870 PF01206 Sulfurtransferase TusA YE105_RS01885 PF16220 Domain of unknown function (DUF4880) YE105_RS01885 PF04773 FecR protein YE105_RS01890 PF07715 TonB-dependent Receptor Plug Domain YE105_RS01895 PF00005 ABC transporter YE105_RS01895 PF06472 ABC transporter transmembrane region 2 YE105_RS01900 PF00675 Insulinase (Peptidase family M16) YE105_RS01900 PF05193 Peptidase M16 inactive domain YE105_RS01905 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system YE105_RS01910 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system YE105_RS01915 PF12794 Mechanosensitive ion channel inner membrane domain 1 YE105_RS01915 PF12795 Mechanosensitive ion channel porin domain YE105_RS01915 PF00924 Mechanosensitive ion channel YE105_RS01920 PF07715 TonB-dependent Receptor Plug Domain YE105_RS01920 PF00593 TonB dependent receptor YE105_RS01930 PF00392 Bacterial regulatory proteins, gntR family YE105_RS01930 PF00155 Aminotransferase class I and II YE105_RS01935 PF00005 ABC transporter YE105_RS01940 PF01032 FecCD transport family YE105_RS01945 PF01497 Periplasmic binding protein YE105_RS01950 PF05171 Haemin-degrading HemS.ChuX domain YE105_RS01955 PF07715 TonB-dependent Receptor Plug Domain YE105_RS01955 PF00593 TonB dependent receptor YE105_RS01960 PF10636 Hemin uptake protein hemP YE105_RS01970 PF06228 Haem utilisation ChuX/HutX YE105_RS01975 PF04055 Radical SAM superfamily YE105_RS01980 PF00291 Pyridoxal-phosphate dependent enzyme YE105_RS01985 PF01490 Transmembrane amino acid transporter protein YE105_RS01990 PF00871 Acetokinase family YE105_RS01995 PF02901 Pyruvate formate lyase-like YE105_RS01995 PF01228 Glycine radical YE105_RS02010 PF02595 Glycerate kinase family YE105_RS02015 PF11412 Disulphide bond corrector protein DsbC YE105_RS02015 PF02683 Cytochrome C biogenesis protein transmembrane region YE105_RS02020 PF03091 CutA1 divalent ion tolerance protein YE105_RS02025 PF03605 Anaerobic c4-dicarboxylate membrane transporter YE105_RS02030 PF10415 Fumarase C C-terminus YE105_RS02030 PF00206 Lyase YE105_RS02035 PF04186 FxsA cytoplasmic membrane protein YE105_RS02040 PF00166 Chaperonin 10 Kd subunit YE105_RS02045 PF00118 TCP-1/cpn60 chaperonin family YE105_RS02055 PF13698 Domain of unknown function (DUF4156) YE105_RS02060 PF04055 Radical SAM superfamily YE105_RS02065 PF09285 Elongation factor P, C-terminal YE105_RS02065 PF01132 Elongation factor P (EF-P) OB domain YE105_RS02065 PF08207 Elongation factor P (EF-P) KOW-like domain YE105_RS02070 PF08085 Entericidin EcnA/B family YE105_RS02075 PF00893 Small Multidrug Resistance protein YE105_RS02080 PF08212 Lipocalin-like domain YE105_RS02085 PF02313 Fumarate reductase subunit D YE105_RS02090 PF02300 Fumarate reductase subunit C YE105_RS02095 PF13085 2Fe-2S iron-sulfur cluster binding domain YE105_RS02095 PF13183 4Fe-4S dicluster domain YE105_RS02100 PF02910 Fumarate reductase flavoprotein C-term YE105_RS02100 PF00890 FAD binding domain YE105_RS02105 PF00152 tRNA synthetases class II (D, K and N) YE105_RS02110 PF12794 Mechanosensitive ion channel inner membrane domain 1 YE105_RS02110 PF12795 Mechanosensitive ion channel porin domain YE105_RS02110 PF00924 Mechanosensitive ion channel YE105_RS02115 PF02666 Phosphatidylserine decarboxylase YE105_RS02120 PF03193 RsgA GTPase YE105_RS02125 PF00929 Exonuclease YE105_RS02135 PF08331 Domain of unknown function (DUF1730) YE105_RS02140 PF03853 YjeF-related protein N-terminus YE105_RS02140 PF01256 Carbohydrate kinase YE105_RS02145 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE YE105_RS02150 PF01520 N-acetylmuramoyl-L-alanine amidase YE105_RS02155 PF01119 DNA mismatch repair protein, C-terminal domain YE105_RS02155 PF08676 MutL C terminal dimerisation domain YE105_RS02165 PF17209 Hfq protein YE105_RS02170 PF16360 GTP-binding GTPase Middle Region YE105_RS02170 PF13167 GTP-binding GTPase N-terminal YE105_RS02170 PF01926 50S ribosome-binding GTPase YE105_RS02175 PF01145 SPFH domain / Band 7 family YE105_RS02175 PF12221 Bacterial membrane protein N terminal YE105_RS02180 PF01145 SPFH domain / Band 7 family YE105_RS02185 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) YE105_RS02190 PF00709 Adenylosuccinate synthetase YE105_RS02195 PF02082 Transcriptional regulator YE105_RS02200 PF08206 Ribonuclease B OB domain YE105_RS02200 PF17876 Cold shock domain YE105_RS02200 PF00575 S1 RNA binding domain YE105_RS02200 PF00773 RNB domain YE105_RS02200 PF08461 Ribonuclease R winged-helix domain YE105_RS02205 PF00588 SpoU rRNA Methylase family YE105_RS02205 PF08032 RNA 2'-O ribose methyltransferase substrate binding YE105_RS02210 PF18158 Adaptive response protein AidB N-terminal domain YE105_RS02210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YE105_RS02210 PF02770 Acyl-CoA dehydrogenase, middle domain YE105_RS02215 PF07338 Protein of unknown function (DUF1471) YE105_RS02220 PF00326 Prolyl oligopeptidase family YE105_RS02230 PF01250 Ribosomal protein S6 YE105_RS02235 PF00436 Single-strand binding protein family YE105_RS02240 PF01084 Ribosomal protein S18 YE105_RS02245 PF03948 Ribosomal protein L9, C-terminal domain YE105_RS02245 PF01281 Ribosomal protein L9, N-terminal domain YE105_RS02255 PF04225 Opacity-associated protein A LysM-like domain YE105_RS02255 PF08525 Opacity-associated protein A N-terminal motif YE105_RS02260 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase YE105_RS02260 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase YE105_RS02265 PF01814 Hemerythrin HHE cation binding domain YE105_RS02265 PF04405 Domain of Unknown function (DUF542) YE105_RS02270 PF02872 5'-nucleotidase, C-terminal domain YE105_RS02270 PF00149 Calcineurin-like phosphoesterase YE105_RS02275 PF00459 Inositol monophosphatase family YE105_RS02280 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) YE105_RS02285 PF06526 Protein of unknown function (DUF1107) YE105_RS02290 PF01595 Cyclin M transmembrane N-terminal domain YE105_RS02290 PF03471 Transporter associated domain YE105_RS02290 PF00571 CBS domain YE105_RS02295 PF01625 Peptide methionine sulfoxide reductase YE105_RS02300 PF17243 POTRA domain TamA domain 1 YE105_RS02300 PF07244 Surface antigen variable number repeat YE105_RS02300 PF01103 Surface antigen YE105_RS02305 PF04357 TamB, inner membrane protein subunit of TAM complex YE105_RS02310 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like YE105_RS02315 PF00719 Inorganic pyrophosphatase YE105_RS02320 PF00672 HAMP domain YE105_RS02320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YE105_RS02320 PF02203 Tar ligand binding domain homologue YE105_RS02325 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain YE105_RS02330 PF01225 Mur ligase family, catalytic domain YE105_RS02330 PF08245 Mur ligase middle domain YE105_RS02330 PF02875 Mur ligase family, glutamate ligase domain YE105_RS02340 PF02863 Arginine repressor, C-terminal domain YE105_RS02340 PF01316 Arginine repressor, DNA binding domain YE105_RS02345 PF00056 lactate/malate dehydrogenase, NAD binding domain YE105_RS02345 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain YE105_RS02350 PF13693 Winged helix-turn-helix DNA-binding YE105_RS02360 PF00348 Polyprenyl synthetase YE105_RS02365 PF00829 Ribosomal prokaryotic L21 protein YE105_RS02370 PF01016 Ribosomal L27 protein YE105_RS02375 PF00892 EamA-like transporter family YE105_RS02380 PF01018 GTP1/OBG YE105_RS02380 PF01926 50S ribosome-binding GTPase YE105_RS02385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YE105_RS02385 PF00672 HAMP domain YE105_RS02385 PF00512 His Kinase A (phospho-acceptor) domain YE105_RS02390 PF00486 Transcriptional regulatory protein, C terminal YE105_RS02390 PF00072 Response regulator receiver domain YE105_RS02395 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family YE105_RS02400 PF03449 Transcription elongation factor, N-terminal YE105_RS02400 PF01272 Transcription elongation factor, GreA/GreB, C-term YE105_RS02405 PF01985 CRS1 / YhbY (CRM) domain YE105_RS02410 PF01728 FtsJ-like methyltransferase YE105_RS02415 PF06480 FtsH Extracellular YE105_RS02415 PF01434 Peptidase family M41 YE105_RS02415 PF17862 AAA+ lid domain YE105_RS02415 PF00004 ATPase family associated with various cellular activities (AAA) YE105_RS02420 PF00809 Pterin binding enzyme YE105_RS02425 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YE105_RS02425 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain YE105_RS02425 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III YE105_RS02425 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II YE105_RS02430 PF03840 Preprotein translocase SecG subunit YE105_RS02445 PF17384 RimP C-terminal SH3 domain YE105_RS02445 PF02576 RimP N-terminal domain YE105_RS02450 PF08529 NusA N-terminal domain YE105_RS02450 PF00575 S1 RNA binding domain YE105_RS02450 PF13184 NusA-like KH domain YE105_RS02455 PF04760 Translation initiation factor IF-2, N-terminal region YE105_RS02455 PF08364 Bacterial translation initiation factor IF-2 associated region YE105_RS02455 PF00009 Elongation factor Tu GTP binding domain YE105_RS02455 PF03144 Elongation factor Tu domain 2 YE105_RS02455 PF11987 Translation-initiation factor 2 YE105_RS02460 PF02033 Ribosome-binding factor A YE105_RS02465 PF16198 tRNA pseudouridylate synthase B C-terminal domain YE105_RS02465 PF01509 TruB family pseudouridylate synthase (N terminal domain) YE105_RS02465 PF09157 Pseudouridine synthase II TruB, C-terminal YE105_RS02470 PF00312 Ribosomal protein S15 YE105_RS02475 PF01138 3' exoribonuclease family, domain 1 YE105_RS02475 PF00013 KH domain YE105_RS02475 PF03725 3' exoribonuclease family, domain 2 YE105_RS02475 PF00575 S1 RNA binding domain YE105_RS02475 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain YE105_RS02480 PF13181 Tetratricopeptide repeat YE105_RS02480 PF07719 Tetratricopeptide repeat YE105_RS02485 PF03880 DbpA RNA binding domain YE105_RS02485 PF00270 DEAD/DEAH box helicase YE105_RS02485 PF12343 Cold shock protein DEAD box A YE105_RS02485 PF00271 Helicase conserved C-terminal domain YE105_RS02495 PF00296 Luciferase-like monooxygenase YE105_RS02500 PF02321 Outer membrane efflux protein YE105_RS02500 PF08139 Prokaryotic membrane lipoprotein lipid attachment site YE105_RS02510 PF03313 Serine dehydratase alpha chain YE105_RS02515 PF01136 Peptidase family U32 YE105_RS02520 PF01136 Peptidase family U32 YE105_RS02525 PF02036 SCP-2 sterol transfer family YE105_RS02530 PF13508 Acetyltransferase (GNAT) domain YE105_RS02535 PF01541 GIY-YIG catalytic domain YE105_RS02540 PF13520 Amino acid permease YE105_RS02545 PF01276 Orn/Lys/Arg decarboxylase, major domain YE105_RS02545 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain YE105_RS02545 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain YE105_RS02550 PF05426 Alginate lyase YE105_RS02550 PF07940 Heparinase II/III-like protein YE105_RS02560 PF13416 Bacterial extracellular solute-binding protein YE105_RS02565 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS02570 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS02575 PF17912 MalK OB fold domain YE105_RS02575 PF00005 ABC transporter YE105_RS02575 PF03459 TOBE domain YE105_RS02595 PF05016 ParE toxin of type II toxin-antitoxin system, parDE YE105_RS02600 PF13460 NAD(P)H-binding YE105_RS02605 PF12706 Beta-lactamase superfamily domain YE105_RS02615 PF07969 Amidohydrolase family YE105_RS02620 PF00005 ABC transporter YE105_RS02625 PF00005 ABC transporter YE105_RS02630 PF06007 Phosphonate metabolism protein PhnJ YE105_RS02635 PF05861 Bacterial phosphonate metabolism protein (PhnI) YE105_RS02640 PF05845 Bacterial phosphonate metabolism protein (PhnH) YE105_RS02645 PF06754 Phosphonate metabolism protein PhnG YE105_RS02650 PF07702 UTRA domain YE105_RS02650 PF00392 Bacterial regulatory proteins, gntR family YE105_RS02670 PF13597 Anaerobic ribonucleoside-triphosphate reductase YE105_RS02670 PF03477 ATP cone domain YE105_RS02680 PF00005 ABC transporter YE105_RS02680 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YE105_RS02685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YE105_RS02685 PF00005 ABC transporter YE105_RS02690 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS02690 PF12911 N-terminal TM domain of oligopeptide transport permease C YE105_RS02695 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS02705 PF04074 YhcH/YjgK/YiaL YE105_RS02710 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain YE105_RS02710 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain YE105_RS02715 PF06877 Regulator of ribonuclease activity B YE105_RS02720 PF00583 Acetyltransferase (GNAT) family YE105_RS02725 PF00133 tRNA synthetases class I (I, L, M and V) YE105_RS02725 PF10458 Valyl tRNA synthetase tRNA binding arm YE105_RS02725 PF08264 Anticodon-binding domain of tRNA YE105_RS02730 PF04364 DNA polymerase III chi subunit, HolC YE105_RS02735 PF00883 Cytosol aminopeptidase family, catalytic domain YE105_RS02735 PF02789 Cytosol aminopeptidase family, N-terminal domain YE105_RS02740 PF03739 Lipopolysaccharide export system permease LptF/LptG YE105_RS02745 PF03739 Lipopolysaccharide export system permease LptF/LptG YE105_RS02790 PF01695 IstB-like ATP binding protein YE105_RS02795 PF00665 Integrase core domain YE105_RS02800 PF13087 AAA domain YE105_RS02800 PF13091 PLD-like domain YE105_RS02805 PF00583 Acetyltransferase (GNAT) family YE105_RS02840 PF00872 Transposase, Mutator family YE105_RS02845 PF10696 Protein of unknown function (DUF2501) YE105_RS02855 PF03992 Antibiotic biosynthesis monooxygenase YE105_RS02860 PF01791 DeoC/LacD family aldolase YE105_RS02865 PF13407 Periplasmic binding protein domain YE105_RS02870 PF02653 Branched-chain amino acid transport system / permease component YE105_RS02875 PF02653 Branched-chain amino acid transport system / permease component YE105_RS02880 PF00005 ABC transporter YE105_RS02885 PF00325 Bacterial regulatory proteins, crp family YE105_RS02885 PF04198 Putative sugar-binding domain YE105_RS02890 PF02782 FGGY family of carbohydrate kinases, C-terminal domain YE105_RS02890 PF00370 FGGY family of carbohydrate kinases, N-terminal domain YE105_RS02895 PF01075 Glycosyltransferase family 9 (heptosyltransferase) YE105_RS02905 PF13520 Amino acid permease YE105_RS02915 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YE105_RS02920 PF00873 AcrB/AcrD/AcrF family YE105_RS02925 PF00465 Iron-containing alcohol dehydrogenase YE105_RS02930 PF02733 Dak1 domain YE105_RS02935 PF02734 DAK2 domain YE105_RS02940 PF00391 PEP-utilising enzyme, mobile domain YE105_RS02940 PF05524 PEP-utilising enzyme, N-terminal YE105_RS02940 PF00381 PTS HPr component phosphorylation site YE105_RS02940 PF03610 PTS system fructose IIA component YE105_RS02950 PF16861 Carbamoyltransferase C-terminus YE105_RS02950 PF02543 Carbamoyltransferase N-terminus YE105_RS02980 PF00989 PAS fold YE105_RS02980 PF00158 Sigma-54 interaction domain YE105_RS02980 PF02954 Bacterial regulatory protein, Fis family YE105_RS02985 PF13407 Periplasmic binding protein domain YE105_RS02985 PF00356 Bacterial regulatory proteins, lacI family YE105_RS02990 PF08244 Glycosyl hydrolases family 32 C terminal YE105_RS02990 PF00251 Glycosyl hydrolases family 32 N-terminal domain YE105_RS02995 PF00367 phosphotransferase system, EIIB YE105_RS02995 PF02378 Phosphotransferase system, EIIC YE105_RS03000 PF02264 LamB porin YE105_RS03000 PF11471 Maltoporin periplasmic N-terminal extension YE105_RS03005 PF00294 pfkB family carbohydrate kinase YE105_RS03015 PF07660 Secretin and TonB N terminus short domain YE105_RS03015 PF07715 TonB-dependent Receptor Plug Domain YE105_RS03015 PF00593 TonB dependent receptor YE105_RS03020 PF00990 Diguanylate cyclase, GGDEF domain YE105_RS03025 PF07256 Protein of unknown function (DUF1435) YE105_RS03040 PF03466 LysR substrate binding domain YE105_RS03040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YE105_RS03045 PF00248 Aldo/keto reductase family YE105_RS03050 PF05175 Methyltransferase small domain YE105_RS03050 PF08468 Methyltransferase small domain N-terminal YE105_RS03055 PF03603 DNA polymerase III psi subunit YE105_RS03060 PF00583 Acetyltransferase (GNAT) family YE105_RS03065 PF16658 Class II release factor RF3, C-terminal domain YE105_RS03065 PF00009 Elongation factor Tu GTP binding domain YE105_RS03065 PF03144 Elongation factor Tu domain 2 YE105_RS03070 PF04972 BON domain YE105_RS03075 PF01734 Patatin-like phospholipase YE105_RS03080 PF01026 TatD related DNase YE105_RS03085 PF07670 Nucleoside recognition YE105_RS03085 PF07662 Na+ dependent nucleoside transporter C-terminus YE105_RS03085 PF01773 Na+ dependent nucleoside transporter N-terminus YE105_RS03090 PF01791 DeoC/LacD family aldolase YE105_RS03095 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain YE105_RS03095 PF02885 Glycosyl transferase family, helical bundle domain YE105_RS03095 PF00591 Glycosyl transferase family, a/b domain YE105_RS03100 PF01676 Metalloenzyme superfamily YE105_RS03105 PF01048 Phosphorylase superfamily YE105_RS03110 PF10144 Bacterial virulence factor haemolysin YE105_RS03115 PF18429 Domain of unknown function (DUF5609) YE105_RS03120 PF18073 Rubredoxin metal binding domain YE105_RS03125 PF13521 AAA domain YE105_RS03125 PF01381 Helix-turn-helix YE105_RS03130 PF00107 Zinc-binding dehydrogenase YE105_RS03130 PF08240 Alcohol dehydrogenase GroES-like domain YE105_RS03135 PF03466 LysR substrate binding domain YE105_RS03135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YE105_RS03140 PF02661 Fic/DOC family YE105_RS03145 PF00005 ABC transporter YE105_RS03145 PF12848 ABC transporter YE105_RS03150 PF00691 OmpA family YE105_RS03155 PF00990 Diguanylate cyclase, GGDEF domain YE105_RS03155 PF17152 Periplasmic sensor domain YE105_RS03165 PF00689 Cation transporting ATPase, C-terminus YE105_RS03165 PF00690 Cation transporter/ATPase, N-terminus YE105_RS03170 PF14718 Soluble lytic murein transglycosylase L domain YE105_RS03170 PF01464 Transglycosylase SLT domain YE105_RS03175 PF01371 Trp repressor protein YE105_RS03180 PF01931 Protein of unknown function DUF84 YE105_RS03185 PF00300 Histidine phosphatase superfamily (branch 1) YE105_RS03190 PF06445 GyrI-like small molecule binding domain YE105_RS03190 PF12833 Helix-turn-helix domain YE105_RS03195 PF05981 CreA protein YE105_RS03200 PF00486 Transcriptional regulatory protein, C terminal YE105_RS03200 PF00072 Response regulator receiver domain YE105_RS03210 PF13840 ACT domain YE105_RS03210 PF01842 ACT domain YE105_RS03210 PF00742 Homoserine dehydrogenase YE105_RS03210 PF00696 Amino acid kinase family YE105_RS03210 PF03447 Homoserine dehydrogenase, NAD binding domain YE105_RS03215 PF08544 GHMP kinases C terminal YE105_RS03215 PF00288 GHMP kinases N terminal domain YE105_RS03220 PF00291 Pyridoxal-phosphate dependent enzyme YE105_RS03220 PF14821 Threonine synthase N terminus YE105_RS03235 PF03883 Peroxide stress protein YaaA YE105_RS03240 PF00923 Transaldolase/Fructose-6-phosphate aldolase YE105_RS03245 PF00994 Probable molybdopterin binding domain YE105_RS03250 PF07690 Major Facilitator Superfamily YE105_RS03260 PF01184 GPR1/FUN34/yaaH family YE105_RS03265 PF00012 Hsp70 protein YE105_RS03270 PF00684 DnaJ central domain YE105_RS03270 PF01556 DnaJ C terminal domain YE105_RS03270 PF00226 DnaJ domain YE105_RS03275 PF06965 Na+/H+ antiporter 1 YE105_RS03280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YE105_RS03280 PF03466 LysR substrate binding domain YE105_RS03285 PF01649 Ribosomal protein S20 YE105_RS03295 PF01687 Riboflavin kinase YE105_RS03295 PF06574 FAD synthetase YE105_RS03300 PF06827 Zinc finger found in FPG and IleRS YE105_RS03300 PF00133 tRNA synthetases class I (I, L, M and V) YE105_RS03300 PF08264 Anticodon-binding domain of tRNA YE105_RS03305 PF01252 Signal peptidase (SPase) II YE105_RS03310 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase YE105_RS03315 PF02401 LytB protein YE105_RS03320 PF01113 Dihydrodipicolinate reductase, N-terminus YE105_RS03320 PF05173 Dihydrodipicolinate reductase, C-terminus YE105_RS03325 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain YE105_RS03325 PF00117 Glutamine amidotransferase class-I YE105_RS03330 PF02142 MGS-like domain YE105_RS03330 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain YE105_RS03330 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain YE105_RS03335 PF01810 LysE type translocator YE105_RS03340 PF06738 Putative threonine/serine exporter YE105_RS03345 PF12821 Threonine/Serine exporter, ThrE YE105_RS03350 PF00186 Dihydrofolate reductase YE105_RS03355 PF00149 Calcineurin-like phosphoesterase YE105_RS03360 PF04379 ApaG domain YE105_RS03365 PF00398 Ribosomal RNA adenine dimethylase YE105_RS03370 PF04166 Pyridoxal phosphate biosynthetic protein PdxA YE105_RS03375 PF09312 SurA N-terminal domain YE105_RS03375 PF00639 PPIC-type PPIASE domain YE105_RS03380 PF03968 OstA-like protein YE105_RS03380 PF04453 LPS transport system D YE105_RS03385 PF05099 Tellurite resistance protein TerB YE105_RS03385 PF00226 DnaJ domain YE105_RS03390 PF00849 RNA pseudouridylate synthase YE105_RS03395 PF09134 Invasin, domain 3 YE105_RS03395 PF11924 Inverse autotransporter, beta-domain YE105_RS03395 PF02369 Bacterial Ig-like domain (group 1) YE105_RS03400 PF00271 Helicase conserved C-terminal domain YE105_RS03400 PF18337 RapA N-terminal Tudor like domain YE105_RS03400 PF18339 RapA N-terminal Tudor like domain 1 YE105_RS03400 PF00176 SNF2 family N-terminal domain YE105_RS03400 PF12137 RNA polymerase recycling family C-terminal YE105_RS03405 PF00136 DNA polymerase family B YE105_RS03405 PF03104 DNA polymerase family B, exonuclease domain YE105_RS03410 PF09335 SNARE associated Golgi protein YE105_RS03415 PF00005 ABC transporter YE105_RS03420 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS03435 PF12793 Sugar transport-related sRNA regulator N-term YE105_RS03435 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YE105_RS03440 PF04055 Radical SAM superfamily YE105_RS03445 PF02901 Pyruvate formate lyase-like YE105_RS03445 PF01228 Glycine radical YE105_RS03450 PF07690 Major Facilitator Superfamily YE105_RS03460 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein YE105_RS03465 PF13525 Outer membrane lipoprotein YE105_RS03470 PF01479 S4 domain YE105_RS03470 PF00849 RNA pseudouridylate synthase YE105_RS03475 PF02578 Multi-copper polyphenol oxidoreductase laccase YE105_RS03480 PF10431 C-terminal, D2-small domain, of ClpB protein YE105_RS03480 PF02861 Clp amino terminal domain, pathogenicity island component YE105_RS03480 PF00004 ATPase family associated with various cellular activities (AAA) YE105_RS03480 PF17871 AAA lid domain YE105_RS03480 PF07724 AAA domain (Cdc48 subfamily) YE105_RS03485 PF02371 Transposase IS116/IS110/IS902 family YE105_RS03485 PF01548 Transposase YE105_RS03490 PF02371 Transposase IS116/IS110/IS902 family YE105_RS03490 PF01548 Transposase YE105_RS03495 PF01817 Chorismate mutase type II YE105_RS03495 PF00800 Prephenate dehydratase YE105_RS03500 PF01817 Chorismate mutase type II YE105_RS03500 PF02153 Prephenate dehydrogenase YE105_RS03505 PF00793 DAHP synthetase I family YE105_RS03510 PF04397 LytTr DNA-binding domain YE105_RS03510 PF00072 Response regulator receiver domain YE105_RS03515 PF03605 Anaerobic c4-dicarboxylate membrane transporter YE105_RS03520 PF04338 Protein of unknown function, DUF481 YE105_RS03525 PF01245 Ribosomal protein L19 YE105_RS03530 PF01746 tRNA (Guanine-1)-methyltransferase YE105_RS03535 PF01782 RimM N-terminal domain YE105_RS03535 PF05239 PRC-barrel domain YE105_RS03540 PF00886 Ribosomal protein S16 YE105_RS03545 PF02881 SRP54-type protein, helical bundle domain YE105_RS03545 PF00448 SRP54-type protein, GTPase domain YE105_RS03545 PF02978 Signal peptide binding domain YE105_RS03550 PF01578 Cytochrome C assembly protein YE105_RS03555 PF03471 Transporter associated domain YE105_RS03555 PF00571 CBS domain YE105_RS03555 PF01595 Cyclin M transmembrane N-terminal domain YE105_RS03560 PF02664 S-Ribosylhomocysteinase (LuxS) YE105_RS03565 PF04262 Glutamate-cysteine ligase YE105_RS03570 PF09335 SNARE associated Golgi protein YE105_RS03575 PF13419 Haloacid dehalogenase-like hydrolase YE105_RS03595 PF02599 Global regulator protein family YE105_RS03600 PF01411 tRNA synthetases class II (A) YE105_RS03600 PF02272 DHHA1 domain YE105_RS03600 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain YE105_RS03605 PF02631 RecX family YE105_RS03610 PF00154 recA bacterial DNA recombination protein YE105_RS03615 PF02464 Competence-damaged protein YE105_RS03630 PF02613 Nitrate reductase delta subunit YE105_RS03635 PF04976 DMSO reductase anchor subunit (DmsC) YE105_RS03640 PF13247 4Fe-4S dicluster domain YE105_RS03640 PF12800 4Fe-4S binding domain YE105_RS03645 PF01568 Molydopterin dinucleotide binding domain YE105_RS03645 PF00384 Molybdopterin oxidoreductase YE105_RS03645 PF04879 Molybdopterin oxidoreductase Fe4S4 domain YE105_RS03650 PF05683 Fumarase C-terminus YE105_RS03650 PF05681 Fumarate hydratase (Fumerase) YE105_RS03655 PF13458 Periplasmic binding protein YE105_RS03660 PF02653 Branched-chain amino acid transport system / permease component YE105_RS03665 PF11862 Domain of unknown function (DUF3382) YE105_RS03665 PF02653 Branched-chain amino acid transport system / permease component YE105_RS03670 PF00005 ABC transporter YE105_RS03695 PF00795 Carbon-nitrogen hydrolase YE105_RS03700 PF13936 Helix-turn-helix domain YE105_RS03700 PF04198 Putative sugar-binding domain YE105_RS03705 PF03610 PTS system fructose IIA component YE105_RS03710 PF03830 PTS system sorbose subfamily IIB component YE105_RS03715 PF03609 PTS system sorbose-specific iic component YE105_RS03720 PF03613 PTS system mannose/fructose/sorbose family IID component YE105_RS03725 PF08240 Alcohol dehydrogenase GroES-like domain YE105_RS03725 PF00107 Zinc-binding dehydrogenase YE105_RS03730 PF01022 Bacterial regulatory protein, arsR family YE105_RS03735 PF03764 Elongation factor G, domain IV YE105_RS03735 PF00009 Elongation factor Tu GTP binding domain YE105_RS03735 PF03144 Elongation factor Tu domain 2 YE105_RS03735 PF00679 Elongation factor G C-terminus YE105_RS03735 PF14492 Elongation Factor G, domain II YE105_RS03745 PF14376 Haem-binding domain YE105_RS03745 PF03150 Di-haem cytochrome c peroxidase YE105_RS03745 PF00034 Cytochrome c YE105_RS03750 PF00155 Aminotransferase class I and II YE105_RS03775 PF02801 Beta-ketoacyl synthase, C-terminal domain YE105_RS03775 PF00109 Beta-ketoacyl synthase, N-terminal domain YE105_RS03780 PF02321 Outer membrane efflux protein YE105_RS03785 PF00005 ABC transporter YE105_RS03785 PF02687 FtsX-like permease family YE105_RS03785 PF12704 MacB-like periplasmic core domain YE105_RS03790 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YE105_RS03795 PF00005 ABC transporter YE105_RS03795 PF03412 Peptidase C39 family YE105_RS03795 PF00664 ABC transporter transmembrane region YE105_RS03820 PF00419 Fimbrial protein YE105_RS03825 PF00419 Fimbrial protein YE105_RS03835 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain YE105_RS03835 PF02753 Pili assembly chaperone PapD, C-terminal domain YE105_RS03840 PF13953 PapC C-terminal domain YE105_RS03840 PF00577 Outer membrane usher protein YE105_RS03840 PF13954 PapC N-terminal domain YE105_RS03845 PF00419 Fimbrial protein YE105_RS03850 PF00419 Fimbrial protein YE105_RS03865 PF01624 MutS domain I YE105_RS03865 PF05192 MutS domain III YE105_RS03865 PF00488 MutS domain V YE105_RS03865 PF05188 MutS domain II YE105_RS03865 PF05190 MutS family domain IV YE105_RS03870 PF04539 Sigma-70 region 3 YE105_RS03870 PF04542 Sigma-70 region 2 YE105_RS03870 PF00140 Sigma-70 factor, region 1.2 YE105_RS03870 PF04545 Sigma-70, region 4 YE105_RS03875 PF01476 LysM domain YE105_RS03875 PF01551 Peptidase family M23 YE105_RS03885 PF01975 Survival protein SurE YE105_RS03890 PF01142 tRNA pseudouridine synthase D (TruD) YE105_RS03895 PF02542 YgbB family YE105_RS03900 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YE105_RS03905 PF04977 Septum formation initiator YE105_RS03910 PF12084 Protein of unknown function (DUF3561) YE105_RS03920 PF00009 Elongation factor Tu GTP binding domain YE105_RS03925 PF01507 Phosphoadenosine phosphosulfate reductase family YE105_RS03930 PF10414 Sirohaem synthase dimerisation region YE105_RS03930 PF14824 Sirohaem biosynthesis protein central YE105_RS03930 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YE105_RS03935 PF04389 Peptidase family M28 YE105_RS03950 PF01507 Phosphoadenosine phosphosulfate reductase family YE105_RS03955 PF01077 Nitrite and sulphite reductase 4Fe-4S domain YE105_RS03955 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain YE105_RS03960 PF00175 Oxidoreductase NAD-binding domain YE105_RS03960 PF00667 FAD binding domain YE105_RS03960 PF00258 Flavodoxin YE105_RS03965 PF01242 6-pyruvoyl tetrahydropterin synthase YE105_RS03990 PF04055 Radical SAM superfamily YE105_RS03995 PF00080 Copper/zinc superoxide dismutase (SODC) YE105_RS04025 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YE105_RS04025 PF01842 ACT domain YE105_RS04025 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YE105_RS04030 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) YE105_RS04035 PF03466 LysR substrate binding domain YE105_RS04035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YE105_RS04040 PF04402 Protein of unknown function (DUF541) YE105_RS04045 PF01810 LysE type translocator YE105_RS04055 PF03222 Tryptophan/tyrosine permease family YE105_RS04060 PF01212 Beta-eliminating lyase YE105_RS04070 PF00694 Aconitase C-terminal domain YE105_RS04075 PF00330 Aconitase family (aconitate hydratase) YE105_RS04080 PF00180 Isocitrate/isopropylmalate dehydrogenase YE105_RS04085 PF08502 LeuA allosteric (dimerisation) domain YE105_RS04085 PF00682 HMGL-like YE105_RS04090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YE105_RS04090 PF03466 LysR substrate binding domain YE105_RS04095 PF00501 AMP-binding enzyme YE105_RS04100 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YE105_RS04100 PF00205 Thiamine pyrophosphate enzyme, central domain YE105_RS04100 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YE105_RS04105 PF10369 Small subunit of acetolactate synthase YE105_RS04110 PF00356 Bacterial regulatory proteins, lacI family YE105_RS04110 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family YE105_RS04115 PF06610 L-alanine exporter YE105_RS04125 PF02381 MraZ protein, putative antitoxin-like YE105_RS04130 PF01795 MraW methylase family YE105_RS04135 PF04999 Cell division protein FtsL YE105_RS04140 PF03717 Penicillin-binding Protein dimerisation domain YE105_RS04140 PF00905 Penicillin binding protein transpeptidase domain YE105_RS04145 PF01225 Mur ligase family, catalytic domain YE105_RS04145 PF02875 Mur ligase family, glutamate ligase domain YE105_RS04145 PF08245 Mur ligase middle domain YE105_RS04150 PF02875 Mur ligase family, glutamate ligase domain YE105_RS04150 PF01225 Mur ligase family, catalytic domain YE105_RS04150 PF08245 Mur ligase middle domain YE105_RS04155 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 YE105_RS04155 PF00953 Glycosyl transferase family 4 YE105_RS04160 PF08245 Mur ligase middle domain YE105_RS04160 PF02875 Mur ligase family, glutamate ligase domain YE105_RS04165 PF01098 Cell cycle protein YE105_RS04170 PF04101 Glycosyltransferase family 28 C-terminal domain YE105_RS04170 PF03033 Glycosyltransferase family 28 N-terminal domain YE105_RS04175 PF01225 Mur ligase family, catalytic domain YE105_RS04175 PF02875 Mur ligase family, glutamate ligase domain YE105_RS04175 PF08245 Mur ligase middle domain YE105_RS04180 PF01820 D-ala D-ala ligase N-terminus YE105_RS04180 PF07478 D-ala D-ala ligase C-terminus YE105_RS04185 PF08478 POTRA domain, FtsQ-type YE105_RS04185 PF03799 Cell division protein FtsQ YE105_RS04190 PF02491 SHS2 domain inserted in FTSA YE105_RS04195 PF00091 Tubulin/FtsZ family, GTPase domain YE105_RS04195 PF12327 FtsZ family, C-terminal domain YE105_RS04200 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase YE105_RS04210 PF06558 Secretion monitor precursor protein (SecM) YE105_RS04215 PF02810 SEC-C motif YE105_RS04215 PF07517 SecA DEAD-like domain YE105_RS04215 PF01043 SecA preprotein cross-linking domain YE105_RS04215 PF07516 SecA Wing and Scaffold domain YE105_RS04220 PF00293 NUDIX domain YE105_RS04225 PF03884 DNA gyrase inhibitor YacG YE105_RS04230 PF07072 Cell division protein YE105_RS04235 PF01121 Dephospho-CoA kinase YE105_RS04240 PF00478 IMP dehydrogenase / GMP reductase domain YE105_RS04245 PF00482 Type II secretion system (T2SS), protein F YE105_RS04250 PF00437 Type II/IV secretion system protein YE105_RS04250 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain YE105_RS04255 PF07963 Prokaryotic N-terminal methylation motif YE105_RS04260 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain YE105_RS04260 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain YE105_RS04265 PF01510 N-acetylmuramoyl-L-alanine amidase YE105_RS04270 PF17113 Regulatory signalling modulator protein AmpE YE105_RS04275 PF00324 Amino acid permease YE105_RS04280 PF07729 FCD domain YE105_RS04280 PF00392 Bacterial regulatory proteins, gntR family YE105_RS04285 PF17831 Pyruvate dehydrogenase E1 component middle domain YE105_RS04285 PF00456 Transketolase, thiamine diphosphate binding domain YE105_RS04290 PF02817 e3 binding domain YE105_RS04290 PF00364 Biotin-requiring enzyme YE105_RS04290 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) YE105_RS04295 PF07992 Pyridine nucleotide-disulphide oxidoreductase YE105_RS04295 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YE105_RS04305 PF01965 DJ-1/PfpI family YE105_RS04305 PF12833 Helix-turn-helix domain YE105_RS04310 PF07715 TonB-dependent Receptor Plug Domain YE105_RS04310 PF00593 TonB dependent receptor YE105_RS04315 PF00330 Aconitase family (aconitate hydratase) YE105_RS04315 PF06434 Aconitate hydratase 2 N-terminus YE105_RS04315 PF11791 Aconitate B N-terminal domain YE105_RS04320 PF06062 Uncharacterised protein family (UPF0231) YE105_RS04325 PF00892 EamA-like transporter family YE105_RS04330 PF18624 CDI immunity protein YE105_RS04335 PF02675 S-adenosylmethionine decarboxylase YE105_RS04340 PF17284 Spermidine synthase tetramerisation domain YE105_RS04345 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) YE105_RS04350 PF00394 Multicopper oxidase YE105_RS04350 PF07731 Multicopper oxidase YE105_RS04350 PF07732 Multicopper oxidase YE105_RS04350 PF10518 TAT (twin-arginine translocation) pathway signal sequence YE105_RS04355 PF00156 Phosphoribosyl transferase domain YE105_RS04360 PF00484 Carbonic anhydrase YE105_RS04365 PF00005 ABC transporter YE105_RS04370 PF01061 ABC-2 type transporter YE105_RS04375 PF01522 Polysaccharide deacetylase YE105_RS04380 PF02261 Aspartate decarboxylase YE105_RS04385 PF02569 Pantoate-beta-alanine ligase YE105_RS04390 PF02548 Ketopantoate hydroxymethyltransferase YE105_RS04395 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) YE105_RS04400 PF12627 Probable RNA and SrmB- binding site of polymerase A YE105_RS04400 PF12626 Polymerase A arginine-rich C-terminus YE105_RS04400 PF01743 Poly A polymerase head domain YE105_RS04405 PF00749 tRNA synthetases class I (E and Q), catalytic domain YE105_RS04410 PF01258 Prokaryotic dksA/traR C4-type zinc finger YE105_RS04415 PF17746 SfsA N-terminal OB domain YE105_RS04415 PF03749 Sugar fermentation stimulation protein RE domain YE105_RS04420 PF02834 LigT like Phosphoesterase YE105_RS04425 PF08482 ATP-dependent helicase C-terminal YE105_RS04425 PF00270 DEAD/DEAH box helicase YE105_RS04425 PF04408 Helicase associated domain (HA2) YE105_RS04425 PF00271 Helicase conserved C-terminal domain YE105_RS04430 PF00905 Penicillin binding protein transpeptidase domain YE105_RS04430 PF14814 Bifunctional transglycosylase second domain YE105_RS04430 PF00912 Transglycosylase YE105_RS04430 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal YE105_RS04435 PF00005 ABC transporter YE105_RS04440 PF01497 Periplasmic binding protein YE105_RS04445 PF01032 FecCD transport family YE105_RS04455 PF00202 Aminotransferase class-III YE105_RS04460 PF00654 Voltage gated chloride channel YE105_RS04465 PF01521 Iron-sulphur cluster biosynthesis YE105_RS04470 PF03458 UPF0126 domain YE105_RS04475 PF01497 Periplasmic binding protein YE105_RS04480 PF01048 Phosphorylase superfamily YE105_RS04485 PF13286 Phosphohydrolase-associated domain YE105_RS04485 PF01966 HD domain YE105_RS04490 PF00595 PDZ domain YE105_RS04495 PF00672 HAMP domain YE105_RS04495 PF00072 Response regulator receiver domain YE105_RS04495 PF00512 His Kinase A (phospho-acceptor) domain YE105_RS04495 PF01627 Hpt domain YE105_RS04495 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) YE105_RS04495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YE105_RS04500 PF05958 tRNA (Uracil-5-)-methyltransferase YE105_RS04500 PF01938 TRAM domain YE105_RS04505 PF02824 TGS domain YE105_RS04505 PF04607 Region found in RelA / SpoT proteins YE105_RS04505 PF13291 ACT domain YE105_RS04510 PF03819 MazG nucleotide pyrophosphohydrolase domain YE105_RS04515 PF06418 CTP synthase N-terminus YE105_RS04515 PF00117 Glutamine amidotransferase class-I YE105_RS04520 PF03952 Enolase, N-terminal domain YE105_RS04520 PF00113 Enolase, C-terminal TIM barrel domain YE105_RS04525 PF01812 5-formyltetrahydrofolate cyclo-ligase family YE105_RS04530 PF05164 Cell division protein ZapA YE105_RS04535 PF03695 Uncharacterised protein family (UPF0149) YE105_RS04540 PF00557 Metallopeptidase family M24 YE105_RS04540 PF05195 Aminopeptidase P, N-terminal domain YE105_RS04545 PF01494 FAD binding domain YE105_RS04550 PF01494 FAD binding domain YE105_RS04555 PF08669 Glycine cleavage T-protein C-terminal barrel domain YE105_RS04555 PF01571 Aminomethyltransferase folate-binding domain YE105_RS04560 PF01597 Glycine cleavage H-protein YE105_RS04565 PF02347 Glycine cleavage system P-protein YE105_RS04585 PF03006 Haemolysin-III related YE105_RS04595 PF01571 Aminomethyltransferase folate-binding domain YE105_RS04600 PF03937 Flavinator of succinate dehydrogenase YE105_RS04605 PF07254 Membrane-bound toxin component of toxin-antitoxin system YE105_RS04610 PF00072 Response regulator receiver domain YE105_RS04610 PF00486 Transcriptional regulatory protein, C terminal YE105_RS04615 PF00672 HAMP domain YE105_RS04615 PF00512 His Kinase A (phospho-acceptor) domain YE105_RS04615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YE105_RS04620 PF06123 Inner membrane protein CreD YE105_RS04625 PF00258 Flavodoxin YE105_RS04630 PF00589 Phage integrase family YE105_RS04630 PF02899 Phage integrase, N-terminal SAM-like domain YE105_RS04635 PF10411 Disulfide bond isomerase protein N-terminus YE105_RS04635 PF13098 Thioredoxin-like domain YE105_RS04640 PF17768 RecJ OB domain YE105_RS04640 PF02272 DHHA1 domain YE105_RS04640 PF01368 DHH family YE105_RS04645 PF00472 RF-1 domain YE105_RS04645 PF03462 PCRF domain YE105_RS04650 PF00152 tRNA synthetases class II (D, K and N) YE105_RS04650 PF01336 OB-fold nucleic acid binding domain YE105_RS04665 PF01695 IstB-like ATP binding protein YE105_RS04670 PF00665 Integrase core domain YE105_RS04680 PF15723 Motility quorum-sensing regulator, toxin of MqsA YE105_RS04685 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA YE105_RS04690 PF00872 Transposase, Mutator family YE105_RS04705 PF13474 SnoaL-like domain YE105_RS04710 PF08448 PAS fold YE105_RS04710 PF00990 Diguanylate cyclase, GGDEF domain YE105_RS04725 PF01037 Lrp/AsnC ligand binding domain YE105_RS04735 PF13802 Galactose mutarotase-like YE105_RS04735 PF01055 Glycosyl hydrolases family 31 YE105_RS04735 PF16338 Domain of unknown function (DUF4968) YE105_RS04735 PF17137 Domain of unknown function (DUF5110) YE105_RS04740 PF07690 Major Facilitator Superfamily YE105_RS04755 PF01556 DnaJ C terminal domain YE105_RS04755 PF00226 DnaJ domain YE105_RS04770 PF01638 HxlR-like helix-turn-helix YE105_RS04775 PF00484 Carbonic anhydrase YE105_RS04790 PF00263 Bacterial type II and III secretion system protein YE105_RS04790 PF03958 Bacterial type II/III secretion system short domain YE105_RS04795 PF00437 Type II/IV secretion system protein YE105_RS04800 PF00482 Type II secretion system (T2SS), protein F YE105_RS04805 PF07963 Prokaryotic N-terminal methylation motif YE105_RS04805 PF08334 Type II secretion system (T2SS), protein G YE105_RS04835 PF01478 Type IV leader peptidase family YE105_RS04835 PF06750 Bacterial Peptidase A24 N-terminal domain YE105_RS04870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YE105_RS04870 PF03466 LysR substrate binding domain YE105_RS04875 PF07690 Major Facilitator Superfamily YE105_RS04880 PF03466 LysR substrate binding domain YE105_RS04880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YE105_RS04885 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain YE105_RS04885 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain YE105_RS04890 PF00356 Bacterial regulatory proteins, lacI family YE105_RS04895 PF01568 Molydopterin dinucleotide binding domain YE105_RS04895 PF00384 Molybdopterin oxidoreductase YE105_RS04900 PF01553 Acyltransferase YE105_RS04900 PF00501 AMP-binding enzyme YE105_RS04900 PF13193 AMP-binding enzyme C-terminal domain YE105_RS04905 PF07690 Major Facilitator Superfamily YE105_RS04910 PF00248 Aldo/keto reductase family YE105_RS04915 PF03741 Integral membrane protein TerC family YE105_RS04920 PF02976 DNA mismatch repair enzyme MutH YE105_RS04930 PF00293 NUDIX domain YE105_RS04935 PF02896 PEP-utilising enzyme, TIM barrel domain YE105_RS04935 PF00391 PEP-utilising enzyme, mobile domain YE105_RS04935 PF01590 GAF domain YE105_RS04935 PF05524 PEP-utilising enzyme, N-terminal YE105_RS04940 PF01790 Prolipoprotein diacylglyceryl transferase YE105_RS04945 PF00303 Thymidylate synthase YE105_RS04950 PF07963 Prokaryotic N-terminal methylation motif YE105_RS04975 PF16187 Middle or third domain of peptidase_M16 YE105_RS04975 PF05193 Peptidase M16 inactive domain YE105_RS04975 PF00675 Insulinase (Peptidase family M16) YE105_RS04980 PF13361 UvrD-like helicase C-terminal domain YE105_RS04980 PF00580 UvrD/REP helicase N-terminal domain YE105_RS04980 PF12705 PD-(D/E)XK nuclease superfamily YE105_RS04985 PF13538 UvrD-like helicase C-terminal domain YE105_RS05000 PF00583 Acetyltransferase (GNAT) family YE105_RS05000 PF00696 Amino acid kinase family YE105_RS05005 PF01520 N-acetylmuramoyl-L-alanine amidase YE105_RS05005 PF11741 AMIN domain YE105_RS05025 PF06725 3D domain YE105_RS05025 PF03562 MltA specific insert domain YE105_RS05030 PF00899 ThiF family YE105_RS05035 PF02657 Fe-S metabolism associated domain YE105_RS05040 PF00266 Aminotransferase class-V YE105_RS05045 PF06004 Bacterial protein of unknown function (DUF903) YE105_RS05050 PF03466 LysR substrate binding domain YE105_RS05050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YE105_RS05055 PF04241 Protein of unknown function (DUF423) YE105_RS05060 PF18125 RlmM ferredoxin-like domain YE105_RS05060 PF01728 FtsJ-like methyltransferase YE105_RS05075 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain YE105_RS05075 PF01367 5'-3' exonuclease, C-terminal SAM fold YE105_RS05080 PF03641 Possible lysine decarboxylase YE105_RS05080 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases YE105_RS05080 PF11892 Domain of unknown function (DUF3412) YE105_RS05085 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term YE105_RS05085 PF14489 QueF-like protein YE105_RS05090 PF07348 Syd protein (SUKH-2) YE105_RS05095 PF04287 tRNA pseudouridine synthase C YE105_RS05100 PF00849 RNA pseudouridylate synthase YE105_RS05105 PF00258 Flavodoxin YE105_RS05110 PF11944 Protein of unknown function (DUF3461) YE105_RS05115 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal YE105_RS05115 PF14602 Hexapeptide repeat of succinyl-transferase YE105_RS05115 PF00132 Bacterial transferase hexapeptide (six repeats) YE105_RS05120 PF01909 Nucleotidyltransferase domain YE105_RS05120 PF01842 ACT domain YE105_RS05120 PF08335 GlnD PII-uridylyltransferase YE105_RS05120 PF01966 HD domain YE105_RS05125 PF00557 Metallopeptidase family M24 YE105_RS05130 PF00318 Ribosomal protein S2 YE105_RS05135 PF00889 Elongation factor TS YE105_RS05140 PF00696 Amino acid kinase family YE105_RS05145 PF01765 Ribosome recycling factor YE105_RS05150 PF13288 DXP reductoisomerase C-terminal domain YE105_RS05150 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase YE105_RS05150 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain YE105_RS05155 PF01255 Putative undecaprenyl diphosphate synthase YE105_RS05165 PF02163 Peptidase family M50 YE105_RS05165 PF17820 PDZ domain YE105_RS05170 PF07244 Surface antigen variable number repeat YE105_RS05170 PF01103 Surface antigen YE105_RS05175 PF03938 Outer membrane protein (OmpH-like) YE105_RS05180 PF00132 Bacterial transferase hexapeptide (six repeats) YE105_RS05180 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD YE105_RS05185 PF07977 FabA-like domain YE105_RS05190 PF00132 Bacterial transferase hexapeptide (six repeats) YE105_RS05190 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 YE105_RS05195 PF02684 Lipid-A-disaccharide synthetase YE105_RS05200 PF01351 Ribonuclease HII YE105_RS05205 PF07733 Bacterial DNA polymerase III alpha NTPase domain YE105_RS05205 PF14579 Helix-hairpin-helix motif YE105_RS05205 PF02811 PHP domain YE105_RS05205 PF17657 Bacterial DNA polymerase III alpha subunit finger domain YE105_RS05205 PF01336 OB-fold nucleic acid binding domain YE105_RS05210 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit YE105_RS05215 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain YE105_RS05215 PF01276 Orn/Lys/Arg decarboxylase, major domain YE105_RS05215 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain YE105_RS05220 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YE105_RS05225 PF01171 PP-loop family YE105_RS05225 PF09179 TilS substrate binding domain YE105_RS05225 PF11734 TilS substrate C-terminal domain YE105_RS05230 PF00034 Cytochrome c YE105_RS05235 PF07073 Modulator of Rho-dependent transcription termination (ROF) YE105_RS05240 PF06786 Uncharacterised protein family (UPF0253) YE105_RS05245 PF07152 YaeQ protein YE105_RS05250 PF00472 RF-1 domain YE105_RS05255 PF04170 NlpE N-terminal domain YE105_RS05255 PF17185 NlpE C-terminal OB domain YE105_RS05260 PF03129 Anticodon binding domain YE105_RS05260 PF04073 Aminoacyl-tRNA editing domain YE105_RS05260 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) YE105_RS05265 PF18389 TrmO C-terminal domain YE105_RS05265 PF01980 tRNA-methyltransferase O YE105_RS05270 PF16358 RcsF lipoprotein YE105_RS05275 PF03180 NLPA lipoprotein YE105_RS05280 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS05285 PF09383 NIL domain YE105_RS05285 PF00005 ABC transporter YE105_RS05315 PF10043 Predicted periplasmic lipoprotein (DUF2279) YE105_RS05320 PF13091 PLD-like domain YE105_RS05325 PF13607 Succinyl-CoA ligase like flavodoxin domain YE105_RS05325 PF13380 CoA binding domain YE105_RS05325 PF00583 Acetyltransferase (GNAT) family YE105_RS05330 PF03942 DTW domain YE105_RS05335 PF00085 Thioredoxin YE105_RS05340 PF00588 SpoU rRNA Methylase family YE105_RS05340 PF08032 RNA 2'-O ribose methyltransferase substrate binding YE105_RS05355 PF07690 Major Facilitator Superfamily YE105_RS05360 PF00529 HlyD membrane-fusion protein of T1SS YE105_RS05360 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YE105_RS05365 PF02321 Outer membrane efflux protein YE105_RS05370 PF01047 MarR family YE105_RS05375 PF05437 Branched-chain amino acid transport protein (AzlD) YE105_RS05380 PF03591 AzlC protein YE105_RS05385 PF07690 Major Facilitator Superfamily YE105_RS05405 PF01425 Amidase YE105_RS05420 PF00497 Bacterial extracellular solute-binding proteins, family 3 YE105_RS05425 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS05430 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS05435 PF00005 ABC transporter YE105_RS05440 PF00266 Aminotransferase class-V YE105_RS05445 PF07687 Peptidase dimerisation domain YE105_RS05445 PF01546 Peptidase family M20/M25/M40 YE105_RS05450 PF00795 Carbon-nitrogen hydrolase YE105_RS05455 PF00155 Aminotransferase class I and II YE105_RS05460 PF00596 Class II Aldolase and Adducin N-terminal domain YE105_RS05470 PF03079 ARD/ARD' family YE105_RS05475 PF01008 Initiation factor 2 subunit family YE105_RS05480 PF01636 Phosphotransferase enzyme family YE105_RS05485 PF08479 POTRA domain, ShlB-type YE105_RS05485 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB YE105_RS05495 PF18071 HMW1C N-terminal YE105_RS05495 PF18254 HMW1 domain 2 YE105_RS05500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YE105_RS05500 PF09317 Domain of unknown function (DUF1974) YE105_RS05500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YE105_RS05505 PF13580 SIS domain YE105_RS05510 PF13230 Glutamine amidotransferases class-II YE105_RS05515 PF03734 L,D-transpeptidase catalytic domain YE105_RS05520 PF11973 NQRA C-terminal domain YE105_RS05520 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) YE105_RS05525 PF03116 NQR2, RnfD, RnfE family YE105_RS05530 PF04205 FMN-binding domain YE105_RS05535 PF02508 Rnf-Nqr subunit, membrane protein YE105_RS05540 PF02508 Rnf-Nqr subunit, membrane protein YE105_RS05545 PF00175 Oxidoreductase NAD-binding domain YE105_RS05545 PF00111 2Fe-2S iron-sulfur cluster binding domain YE105_RS05545 PF00970 Oxidoreductase FAD-binding domain YE105_RS05550 PF02424 ApbE family YE105_RS05555 PF04400 (Na+)-NQR maturation NqrM YE105_RS05560 PF03009 Glycerophosphoryl diester phosphodiesterase family YE105_RS05565 PF07478 D-ala D-ala ligase C-terminus YE105_RS05565 PF01820 D-ala D-ala ligase N-terminus YE105_RS05570 PF08348 YheO-like PAS domain YE105_RS05570 PF13309 HTH domain YE105_RS05575 PF00291 Pyridoxal-phosphate dependent enzyme YE105_RS05585 PF11799 impB/mucB/samB family C-terminal domain YE105_RS05585 PF00817 impB/mucB/samB family YE105_RS05585 PF11798 IMS family HHH motif YE105_RS05590 PF01546 Peptidase family M20/M25/M40 YE105_RS05590 PF07687 Peptidase dimerisation domain YE105_RS05595 PF00156 Phosphoribosyl transferase domain YE105_RS05600 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) YE105_RS05605 PF07417 Sigma factor-binding transcriptional regulator Crl YE105_RS05610 PF00696 Amino acid kinase family YE105_RS05610 PF01472 PUA domain YE105_RS05615 PF00171 Aldehyde dehydrogenase family YE105_RS05620 PF07702 UTRA domain YE105_RS05620 PF00392 Bacterial regulatory proteins, gntR family YE105_RS05625 PF02378 Phosphotransferase system, EIIC YE105_RS05625 PF00367 phosphotransferase system, EIIB YE105_RS05630 PF11975 Family 4 glycosyl hydrolase C-terminal domain YE105_RS05630 PF02056 Family 4 glycosyl hydrolase YE105_RS05635 PF07238 PilZ domain YE105_RS05635 PF07317 Flagellar regulator YcgR YE105_RS05640 PF06165 Glycosyltransferase family 36 YE105_RS05640 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain YE105_RS05640 PF10091 Putative glucoamylase YE105_RS05655 PF08241 Methyltransferase domain YE105_RS05675 PF00593 TonB dependent receptor YE105_RS05675 PF07715 TonB-dependent Receptor Plug Domain YE105_RS05680 PF01202 Shikimate kinase YE105_RS05685 PF06865 Pyrimidine/purine nucleoside phosphorylase YE105_RS05690 PF04381 Putative exonuclease, RdgC YE105_RS05695 PF00480 ROK family YE105_RS05710 PF13476 AAA domain YE105_RS05715 PF00149 Calcineurin-like phosphoesterase YE105_RS05715 PF12320 Type 5 capsule protein repressor C-terminal domain YE105_RS05720 PF00072 Response regulator receiver domain YE105_RS05720 PF00486 Transcriptional regulatory protein, C terminal YE105_RS05725 PF11808 Phosphate regulon sensor protein PhoR YE105_RS05725 PF00989 PAS fold YE105_RS05725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YE105_RS05725 PF00512 His Kinase A (phospho-acceptor) domain YE105_RS05730 PF12849 PBP superfamily domain YE105_RS05735 PF05525 Branched-chain amino acid transport protein YE105_RS05740 PF00324 Amino acid permease YE105_RS05745 PF00128 Alpha amylase, catalytic domain YE105_RS05745 PF02903 Alpha amylase, N-terminal ig-like domain YE105_RS05760 PF01848 Hok/gef family YE105_RS05765 PF00578 AhpC/TSA family YE105_RS05765 PF10417 C-terminal domain of 1-Cys peroxiredoxin YE105_RS05770 PF04336 Acyl carrier protein phosphodiesterase YE105_RS05775 PF02547 Queuosine biosynthesis protein YE105_RS05795 PF01702 Queuine tRNA-ribosyltransferase YE105_RS05800 PF02699 Preprotein translocase subunit YE105_RS05805 PF02355 Protein export membrane protein YE105_RS05805 PF07549 SecD/SecF GG Motif YE105_RS05805 PF13721 SecD export protein N-terminal TM region YE105_RS05810 PF02355 Protein export membrane protein YE105_RS05810 PF07549 SecD/SecF GG Motif YE105_RS05825 PF03477 ATP cone domain YE105_RS05830 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region YE105_RS05830 PF01872 RibD C-terminal domain YE105_RS05835 PF00885 6,7-dimethyl-8-ribityllumazine synthase YE105_RS05840 PF01029 NusB family YE105_RS05845 PF02769 AIR synthase related protein, C-terminal domain YE105_RS05845 PF00586 AIR synthase related protein, N-terminal domain YE105_RS05850 PF04608 Phosphatidylglycerophosphatase A YE105_RS05860 PF02780 Transketolase, C-terminal domain YE105_RS05860 PF02779 Transketolase, pyrimidine binding domain YE105_RS05860 PF13292 1-deoxy-D-xylulose-5-phosphate synthase YE105_RS05865 PF00348 Polyprenyl synthetase YE105_RS05870 PF02609 Exonuclease VII small subunit YE105_RS05875 PF02568 Thiamine biosynthesis protein (ThiI) YE105_RS05875 PF02926 THUMP domain YE105_RS05880 PF01965 DJ-1/PfpI family YE105_RS05885 PF08546 Ketopantoate reductase PanE/ApbA C terminal YE105_RS05885 PF02558 Ketopantoate reductase PanE/ApbA YE105_RS05890 PF04461 Protein of unknown function (DUF520) YE105_RS05895 PF07690 Major Facilitator Superfamily YE105_RS05900 PF01040 UbiA prenyltransferase family YE105_RS05905 PF03626 Prokaryotic Cytochrome C oxidase subunit IV YE105_RS05910 PF00510 Cytochrome c oxidase subunit III YE105_RS05915 PF00115 Cytochrome C and Quinol oxidase polypeptide I YE105_RS05920 PF06481 COX Aromatic Rich Motif YE105_RS05920 PF00116 Cytochrome C oxidase subunit II, periplasmic domain YE105_RS05925 PF03502 Nucleoside-specific channel-forming protein, Tsx YE105_RS05930 PF07690 Major Facilitator Superfamily YE105_RS05935 PF08139 Prokaryotic membrane lipoprotein lipid attachment site YE105_RS05935 PF03923 Uncharacterized lipoprotein YE105_RS05940 PF01722 BolA-like protein YE105_RS05950 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase YE105_RS05950 PF05698 Bacterial trigger factor protein (TF) C-terminus YE105_RS05950 PF05697 Bacterial trigger factor protein (TF) YE105_RS05955 PF00574 Clp protease YE105_RS05960 PF07724 AAA domain (Cdc48 subfamily) YE105_RS05960 PF06689 ClpX C4-type zinc finger YE105_RS05960 PF10431 C-terminal, D2-small domain, of ClpB protein YE105_RS05965 PF02190 ATP-dependent protease La (LON) substrate-binding domain YE105_RS05965 PF05362 Lon protease (S16) C-terminal proteolytic domain YE105_RS05965 PF00004 ATPase family associated with various cellular activities (AAA) YE105_RS05970 PF00216 Bacterial DNA-binding protein YE105_RS05975 PF13145 PPIC-type PPIASE domain YE105_RS05990 PF06508 Queuosine biosynthesis protein QueC YE105_RS05995 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YE105_RS05995 PF12793 Sugar transport-related sRNA regulator N-term YE105_RS06010 PF01037 Lrp/AsnC ligand binding domain YE105_RS06010 PF13404 AsnC-type helix-turn-helix domain YE105_RS06015 PF00005 ABC transporter YE105_RS06015 PF00664 ABC transporter transmembrane region YE105_RS06020 PF00005 ABC transporter YE105_RS06020 PF00664 ABC transporter transmembrane region YE105_RS06025 PF00543 Nitrogen regulatory protein P-II YE105_RS06030 PF00909 Ammonium Transporter Family YE105_RS06040 PF09619 Type III secretion system lipoprotein chaperone (YscW) YE105_RS06045 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain YE105_RS06050 PF05321 Haemolysin expression modulating protein YE105_RS06055 PF10757 Biofilm formation regulator YbaJ YE105_RS06065 PF00005 ABC transporter YE105_RS06070 PF00950 ABC 3 transport family YE105_RS06075 PF01297 Zinc-uptake complex component A periplasmic YE105_RS06080 PF00444 Ribosomal protein L36 YE105_RS06085 PF01197 Ribosomal protein L31 YE105_RS06090 PF10797 Protein of unknown function YE105_RS06095 PF10941 Protein of unknown function DUF2620 YE105_RS06100 PF01676 Metalloenzyme superfamily YE105_RS06105 PF01168 Alanine racemase, N-terminal domain YE105_RS06115 PF00873 AcrB/AcrD/AcrF family YE105_RS06120 PF00529 HlyD membrane-fusion protein of T1SS YE105_RS06120 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YE105_RS06125 PF08361 MAATS-type transcriptional repressor, C-terminal region YE105_RS06125 PF00440 Bacterial regulatory proteins, tetR family YE105_RS06130 PF02635 DsrE/DsrF-like family YE105_RS06135 PF00924 Mechanosensitive ion channel YE105_RS06135 PF12794 Mechanosensitive ion channel inner membrane domain 1 YE105_RS06135 PF12795 Mechanosensitive ion channel porin domain YE105_RS06140 PF10689 Protein of unknown function (DUF2496) YE105_RS06150 PF04304 Protein of unknown function (DUF454) YE105_RS06155 PF00156 Phosphoribosyl transferase domain YE105_RS06160 PF12170 DNA polymerase III tau subunit V interacting with alpha YE105_RS06160 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding YE105_RS06160 PF12169 DNA polymerase III subunits gamma and tau domain III YE105_RS06165 PF02575 YbaB/EbfC DNA-binding family YE105_RS06170 PF13662 Toprim domain YE105_RS06170 PF02132 RecR protein YE105_RS06175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YE105_RS06175 PF00183 Hsp90 protein YE105_RS06180 PF05191 Adenylate kinase, active site lid YE105_RS06185 PF00762 Ferrochelatase YE105_RS06190 PF01943 Polysaccharide biosynthesis protein YE105_RS06195 PF01501 Glycosyl transferase family 8 YE105_RS06195 PF00535 Glycosyl transferase family 2 YE105_RS06200 PF00535 Glycosyl transferase family 2 YE105_RS06205 PF00534 Glycosyl transferases group 1 YE105_RS06205 PF13439 Glycosyltransferase Family 4 YE105_RS06210 PF04101 Glycosyltransferase family 28 C-terminal domain YE105_RS06210 PF03033 Glycosyltransferase family 28 N-terminal domain YE105_RS06215 PF00953 Glycosyl transferase family 4 YE105_RS06220 PF02719 Polysaccharide biosynthesis protein YE105_RS06225 PF00534 Glycosyl transferases group 1 YE105_RS06225 PF13439 Glycosyltransferase Family 4 YE105_RS06230 PF16363 GDP-mannose 4,6 dehydratase YE105_RS06235 PF00294 pfkB family carbohydrate kinase YE105_RS06240 PF00999 Sodium/hydrogen exchanger family YE105_RS06240 PF02254 TrkA-N domain YE105_RS06245 PF07690 Major Facilitator Superfamily YE105_RS06250 PF02872 5'-nucleotidase, C-terminal domain YE105_RS06250 PF00149 Calcineurin-like phosphoesterase YE105_RS06260 PF04073 Aminoacyl-tRNA editing domain YE105_RS06265 PF01963 TraB family YE105_RS06270 PF00403 Heavy-metal-associated domain YE105_RS06275 PF13411 MerR HTH family regulatory protein YE105_RS06280 PF01957 NfeD-like C-terminal, partner-binding YE105_RS06285 PF01145 SPFH domain / Band 7 family YE105_RS06285 PF16200 C-terminal region of band_7 YE105_RS06290 PF00085 Thioredoxin YE105_RS06295 PF00106 short chain dehydrogenase YE105_RS06300 PF13472 GDSL-like Lipase/Acylhydrolase family YE105_RS06305 PF00005 ABC transporter YE105_RS06315 PF02222 ATP-grasp domain YE105_RS06315 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain YE105_RS06320 PF00731 AIR carboxylase YE105_RS06325 PF00149 Calcineurin-like phosphoesterase YE105_RS06330 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD YE105_RS06335 PF01406 tRNA synthetases class I (C) catalytic domain YE105_RS06335 PF09190 DALR domain YE105_RS06345 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain YE105_RS06345 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain YE105_RS06355 PF00589 Phage integrase family YE105_RS06360 PF01695 IstB-like ATP binding protein YE105_RS06365 PF00665 Integrase core domain YE105_RS06375 PF00072 Response regulator receiver domain YE105_RS06375 PF00486 Transcriptional regulatory protein, C terminal YE105_RS06395 PF08007 Cupin superfamily protein YE105_RS06400 PF00221 Aromatic amino acid lyase YE105_RS06405 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YE105_RS06415 PF00005 ABC transporter YE105_RS06415 PF00664 ABC transporter transmembrane region YE105_RS06430 PF00149 Calcineurin-like phosphoesterase YE105_RS06440 PF00196 Bacterial regulatory proteins, luxR family YE105_RS06445 PF00313 'Cold-shock' DNA-binding domain YE105_RS06450 PF00313 'Cold-shock' DNA-binding domain YE105_RS06455 PF02537 CrcB-like protein, Camphor Resistance (CrcB) YE105_RS06460 PF05230 MASE2 domain YE105_RS06460 PF00990 Diguanylate cyclase, GGDEF domain YE105_RS06465 PF02416 mttA/Hcf106 family YE105_RS06470 PF04055 Radical SAM superfamily YE105_RS06470 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family YE105_RS06475 PF03099 Biotin/lipoate A/B protein ligase family YE105_RS06480 PF04359 Protein of unknown function (DUF493) YE105_RS06485 PF07943 Penicillin-binding protein 5, C-terminal domain YE105_RS06485 PF00768 D-alanyl-D-alanine carboxypeptidase YE105_RS06490 PF05036 Sporulation related domain YE105_RS06490 PF03330 Lytic transglycolase YE105_RS06495 PF01098 Cell cycle protein YE105_RS06500 PF00905 Penicillin binding protein transpeptidase domain YE105_RS06500 PF03717 Penicillin-binding Protein dimerisation domain YE105_RS06505 PF02590 Predicted SPOUT methyltransferase YE105_RS06515 PF01467 Cytidylyltransferase-like YE105_RS06520 PF14840 Processivity clamp loader gamma complex DNA pol III C-term YE105_RS06520 PF06144 DNA polymerase III, delta subunit YE105_RS06525 PF04390 Lipopolysaccharide-assembly YE105_RS06530 PF13603 Leucyl-tRNA synthetase, Domain 2 YE105_RS06530 PF00133 tRNA synthetases class I (I, L, M and V) YE105_RS06530 PF08264 Anticodon-binding domain of tRNA YE105_RS06535 PF07295 Zinc-ribbon containing domain YE105_RS06540 PF00005 ABC transporter YE105_RS06545 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS06550 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS06555 PF00497 Bacterial extracellular solute-binding proteins, family 3 YE105_RS06565 PF00795 Carbon-nitrogen hydrolase YE105_RS06570 PF00571 CBS domain YE105_RS06570 PF03471 Transporter associated domain YE105_RS06575 PF02130 Uncharacterized protein family UPF0054 YE105_RS06580 PF02562 PhoH-like protein YE105_RS06585 PF00919 Uncharacterized protein family UPF0004 YE105_RS06585 PF04055 Radical SAM superfamily YE105_RS06585 PF01938 TRAM domain YE105_RS06590 PF01494 FAD binding domain YE105_RS06625 PF13537 Glutamine amidotransferase domain YE105_RS06625 PF00733 Asparagine synthase YE105_RS06630 PF13344 Haloacid dehalogenase-like hydrolase YE105_RS06635 PF01047 MarR family YE105_RS06635 PF00480 ROK family YE105_RS06640 PF01979 Amidohydrolase family YE105_RS06645 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase YE105_RS06650 PF02378 Phosphotransferase system, EIIC YE105_RS06650 PF00367 phosphotransferase system, EIIB YE105_RS06650 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 YE105_RS06655 PF00749 tRNA synthetases class I (E and Q), catalytic domain YE105_RS06655 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain YE105_RS06660 PF03573 outer membrane porin, OprD family YE105_RS06665 PF13982 YbfN-like lipoprotein YE105_RS06675 PF01475 Ferric uptake regulator family YE105_RS06680 PF00258 Flavodoxin YE105_RS06685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YE105_RS06685 PF00672 HAMP domain YE105_RS06685 PF02203 Tar ligand binding domain homologue YE105_RS06690 PF01402 Ribbon-helix-helix protein, copG family YE105_RS06695 PF12697 Alpha/beta hydrolase family YE105_RS06700 PF17206 SeqA protein N-terminal domain YE105_RS06700 PF03925 SeqA protein C-terminal domain YE105_RS06705 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain YE105_RS06705 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II YE105_RS06705 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YE105_RS06705 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III YE105_RS06715 PF00892 EamA-like transporter family YE105_RS06720 PF00486 Transcriptional regulatory protein, C terminal YE105_RS06720 PF00072 Response regulator receiver domain YE105_RS06725 PF13493 Domain of unknown function (DUF4118) YE105_RS06725 PF13492 GAF domain YE105_RS06725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YE105_RS06725 PF00512 His Kinase A (phospho-acceptor) domain YE105_RS06725 PF02702 Osmosensitive K+ channel His kinase sensor domain YE105_RS06730 PF02669 K+-transporting ATPase, c chain YE105_RS06740 PF03814 Potassium-transporting ATPase A subunit YE105_RS06745 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) YE105_RS06750 PF10725 Protein of unknown function (DUF2517) YE105_RS06760 PF02794 RTX toxin acyltransferase family YE105_RS06775 PF08349 Protein of unknown function (DUF1722) YE105_RS06780 PF00875 DNA photolyase YE105_RS06780 PF03441 FAD binding domain of DNA photolyase YE105_RS06785 PF02112 cAMP phosphodiesterases class-II YE105_RS06790 PF01784 NIF3 (NGG1p interacting factor 3) YE105_RS06795 PF02682 Carboxyltransferase domain, subdomain C and D YE105_RS06800 PF02626 Carboxyltransferase domain, subdomain A and B YE105_RS06805 PF03746 LamB/YcsF family YE105_RS06820 PF01470 Pyroglutamyl peptidase YE105_RS06825 PF00285 Citrate synthase, C-terminal domain YE105_RS06830 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit YE105_RS06835 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit YE105_RS06840 PF02910 Fumarate reductase flavoprotein C-term YE105_RS06840 PF00890 FAD binding domain YE105_RS06845 PF13085 2Fe-2S iron-sulfur cluster binding domain YE105_RS06850 PF02779 Transketolase, pyrimidine binding domain YE105_RS06850 PF00676 Dehydrogenase E1 component YE105_RS06850 PF16078 2-oxoglutarate dehydrogenase N-terminus YE105_RS06850 PF16870 2-oxoglutarate dehydrogenase C-terminal YE105_RS06855 PF02817 e3 binding domain YE105_RS06855 PF00364 Biotin-requiring enzyme YE105_RS06855 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) YE105_RS06860 PF08442 ATP-grasp domain YE105_RS06860 PF00549 CoA-ligase YE105_RS06865 PF00549 CoA-ligase YE105_RS06865 PF02629 CoA binding domain YE105_RS06875 PF01654 Cytochrome bd terminal oxidase subunit I YE105_RS06880 PF02322 Cytochrome bd terminal oxidase subunit II YE105_RS06885 PF08173 Membrane bound YbgT-like protein YE105_RS06890 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) YE105_RS06895 PF03061 Thioesterase superfamily YE105_RS06900 PF01618 MotA/TolQ/ExbB proton channel family YE105_RS06905 PF02472 Biopolymer transport protein ExbD/TolR YE105_RS06910 PF06519 TolA C-terminal YE105_RS06910 PF06519 TolA C-terminal YE105_RS06915 PF04052 TolB amino-terminal domain YE105_RS06915 PF07676 WD40-like Beta Propeller Repeat YE105_RS06920 PF00691 OmpA family YE105_RS06925 PF13174 Tetratricopeptide repeat YE105_RS06925 PF16331 TolA binding protein trimerisation YE105_RS06940 PF02445 Quinolinate synthetase A protein YE105_RS06945 PF04973 Nicotinamide mononucleotide transporter YE105_RS06950 PF01545 Cation efflux family YE105_RS06955 PF00793 DAHP synthetase I family YE105_RS06960 PF00300 Histidine phosphatase superfamily (branch 1) YE105_RS06965 PF01223 DNA/RNA non-specific endonuclease YE105_RS06970 PF00082 Subtilase family YE105_RS06985 PF01263 Aldose 1-epimerase YE105_RS06990 PF00288 GHMP kinases N terminal domain YE105_RS06990 PF08544 GHMP kinases C terminal YE105_RS06990 PF10509 Galactokinase galactose-binding signature YE105_RS06995 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain YE105_RS06995 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain YE105_RS07000 PF16363 GDP-mannose 4,6 dehydratase YE105_RS07010 PF00005 ABC transporter YE105_RS07015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YE105_RS07015 PF03459 TOBE domain YE105_RS07020 PF10766 Multidrug efflux pump-associated protein AcrZ YE105_RS07030 PF00589 Phage integrase family YE105_RS07030 PF13356 Arm DNA-binding domain YE105_RS07210 PF00959 Phage lysozyme YE105_RS07220 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS07225 PF03459 TOBE domain YE105_RS07225 PF00005 ABC transporter YE105_RS07235 PF10282 Lactonase, 7-bladed beta-propeller YE105_RS07240 PF00202 Aminotransferase class-III YE105_RS07245 PF06968 Biotin and Thiamin Synthesis associated domain YE105_RS07245 PF04055 Radical SAM superfamily YE105_RS07250 PF00155 Aminotransferase class I and II YE105_RS07255 PF08241 Methyltransferase domain YE105_RS07265 PF00005 ABC transporter YE105_RS07270 PF17757 UvrB interaction domain YE105_RS07270 PF02151 UvrB/uvrC motif YE105_RS07270 PF00271 Helicase conserved C-terminal domain YE105_RS07270 PF12344 Ultra-violet resistance protein B YE105_RS07270 PF04851 Type III restriction enzyme, res subunit YE105_RS07275 PF09905 DNA-binding protein VF530 YE105_RS07280 PF01933 Uncharacterised protein family UPF0052 YE105_RS07285 PF04055 Radical SAM superfamily YE105_RS07285 PF06463 Molybdenum Cofactor Synthesis C YE105_RS07290 PF01967 MoaC family YE105_RS07295 PF02597 ThiS family YE105_RS07300 PF02391 MoaE protein YE105_RS07305 PF01027 Inhibitor of apoptosis-promoting Bax1 YE105_RS07320 PF00005 ABC transporter YE105_RS07325 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YE105_RS07330 PF00440 Bacterial regulatory proteins, tetR family YE105_RS07330 PF09209 Tetracyclin repressor-like, C-terminal domain YE105_RS07335 PF00271 Helicase conserved C-terminal domain YE105_RS07335 PF00270 DEAD/DEAH box helicase YE105_RS07340 PF01207 Dihydrouridine synthase (Dus) YE105_RS07350 PF03448 MgtE intracellular N domain YE105_RS07350 PF01769 Divalent cation transporter YE105_RS07350 PF00571 CBS domain YE105_RS07360 PF00768 D-alanyl-D-alanine carboxypeptidase YE105_RS07365 PF09330 D-lactate dehydrogenase, membrane binding YE105_RS07365 PF01565 FAD binding domain YE105_RS07370 PF01928 CYTH domain YE105_RS07375 PF01844 HNH endonuclease YE105_RS07385 PF04226 Transglycosylase associated protein YE105_RS07390 PF00005 ABC transporter YE105_RS07400 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS07405 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS07410 PF07308 Protein of unknown function (DUF1456) YE105_RS07420 PF02653 Branched-chain amino acid transport system / permease component YE105_RS07425 PF02653 Branched-chain amino acid transport system / permease component YE105_RS07430 PF00005 ABC transporter YE105_RS07435 PF00005 ABC transporter YE105_RS07440 PF00581 Rhodanese-like domain YE105_RS07455 PF04069 Substrate binding domain of ABC-type glycine betaine transport system YE105_RS07460 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS07465 PF00005 ABC transporter YE105_RS07470 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS07485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YE105_RS07485 PF03466 LysR substrate binding domain YE105_RS07495 PF00892 EamA-like transporter family YE105_RS07505 PF00267 Gram-negative porin YE105_RS07510 PF13307 Helicase C-terminal domain YE105_RS07510 PF06733 DEAD_2 YE105_RS07515 PF00230 Major intrinsic protein YE105_RS07520 PF02885 Glycosyl transferase family, helical bundle domain YE105_RS07540 PF05971 RNA methyltransferase YE105_RS07545 PF13426 PAS domain YE105_RS07545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YE105_RS07545 PF08447 PAS fold YE105_RS07550 PF00005 ABC transporter YE105_RS07555 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS07560 PF00497 Bacterial extracellular solute-binding proteins, family 3 YE105_RS07565 PF01258 Prokaryotic dksA/traR C4-type zinc finger YE105_RS07570 PF00210 Ferritin-like domain YE105_RS07575 PF13847 Methyltransferase domain YE105_RS07590 PF02469 Fasciclin domain YE105_RS07600 PF00892 EamA-like transporter family YE105_RS07610 PF13505 Outer membrane protein beta-barrel domain YE105_RS07630 PF00005 ABC transporter YE105_RS07630 PF12848 ABC transporter YE105_RS07640 PF00899 ThiF family YE105_RS07645 PF00994 Probable molybdopterin binding domain YE105_RS07645 PF03454 MoeA C-terminal region (domain IV) YE105_RS07645 PF03453 MoeA N-terminal region (domain I and II) YE105_RS07660 PF12704 MacB-like periplasmic core domain YE105_RS07660 PF00005 ABC transporter YE105_RS07660 PF02687 FtsX-like permease family YE105_RS07680 PF00756 Putative esterase YE105_RS07685 PF00107 Zinc-binding dehydrogenase YE105_RS07685 PF08240 Alcohol dehydrogenase GroES-like domain YE105_RS07690 PF03466 LysR substrate binding domain YE105_RS07690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YE105_RS07695 PF06779 Uncharacterised MFS-type transporter YbfB YE105_RS07700 PF01227 GTP cyclohydrolase I YE105_RS07705 PF04235 Protein of unknown function (DUF418) YE105_RS07710 PF00356 Bacterial regulatory proteins, lacI family YE105_RS07715 PF13407 Periplasmic binding protein domain YE105_RS07720 PF00005 ABC transporter YE105_RS07725 PF02653 Branched-chain amino acid transport system / permease component YE105_RS07730 PF01590 GAF domain YE105_RS07730 PF00158 Sigma-54 interaction domain YE105_RS07735 PF00384 Molybdopterin oxidoreductase YE105_RS07735 PF04879 Molybdopterin oxidoreductase Fe4S4 domain YE105_RS07735 PF01568 Molydopterin dinucleotide binding domain YE105_RS07740 PF13247 4Fe-4S dicluster domain YE105_RS07740 PF12800 4Fe-4S binding domain YE105_RS07745 PF01750 Hydrogenase maturation protease YE105_RS07750 PF07450 Formate hydrogenlyase maturation protein HycH YE105_RS07755 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit YE105_RS07760 PF12838 4Fe-4S dicluster domain YE105_RS07765 PF00374 Nickel-dependent hydrogenase YE105_RS07765 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit YE105_RS07765 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit YE105_RS07770 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus YE105_RS07770 PF00361 Proton-conducting membrane transporter YE105_RS07775 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L YE105_RS07780 PF00361 Proton-conducting membrane transporter YE105_RS07780 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus YE105_RS07785 PF00146 NADH dehydrogenase YE105_RS07790 PF00361 Proton-conducting membrane transporter YE105_RS07795 PF00037 4Fe-4S binding domain YE105_RS07795 PF12798 4Fe-4S binding domain YE105_RS07800 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA YE105_RS07805 PF01455 HupF/HypC family YE105_RS07810 PF02698 DUF218 domain YE105_RS07815 PF00390 Malic enzyme, N-terminal domain YE105_RS07815 PF03949 Malic enzyme, NAD binding domain YE105_RS07825 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region YE105_RS07825 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region YE105_RS07830 PF04172 LrgB-like family YE105_RS07835 PF03788 LrgA family YE105_RS07840 PF07690 Major Facilitator Superfamily YE105_RS07865 PF09334 tRNA synthetases class I (M) YE105_RS07865 PF01588 Putative tRNA binding domain YE105_RS07870 PF10609 NUBPL iron-transfer P-loop NTPase YE105_RS07875 PF00485 Phosphoribulokinase / Uridine kinase family YE105_RS07880 PF00692 dUTPase YE105_RS07885 PF05170 AsmA family YE105_RS07890 PF03606 C4-dicarboxylate anaerobic carrier YE105_RS07895 PF00571 CBS domain YE105_RS07895 PF03471 Transporter associated domain YE105_RS07895 PF03741 Integral membrane protein TerC family YE105_RS07900 PF00483 Nucleotidyl transferase YE105_RS07900 PF01050 Mannose-6-phosphate isomerase YE105_RS07905 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain YE105_RS07905 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II YE105_RS07905 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III YE105_RS07905 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YE105_RS07910 PF00483 Nucleotidyl transferase YE105_RS07915 PF00483 Nucleotidyl transferase YE105_RS07920 PF16363 GDP-mannose 4,6 dehydratase YE105_RS07925 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family YE105_RS07935 PF00005 ABC transporter YE105_RS07950 PF00551 Formyl transferase YE105_RS07950 PF02911 Formyl transferase, C-terminal domain YE105_RS07955 PF00534 Glycosyl transferases group 1 YE105_RS07955 PF13439 Glycosyltransferase Family 4 YE105_RS07960 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain YE105_RS07960 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase YE105_RS07965 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase YE105_RS07965 PF01502 Phosphoribosyl-AMP cyclohydrolase YE105_RS07970 PF00977 Histidine biosynthesis protein YE105_RS07975 PF00977 Histidine biosynthesis protein YE105_RS07980 PF00117 Glutamine amidotransferase class-I YE105_RS07985 PF00475 Imidazoleglycerol-phosphate dehydratase YE105_RS07990 PF00155 Aminotransferase class I and II YE105_RS07995 PF00815 Histidinol dehydrogenase YE105_RS08000 PF01634 ATP phosphoribosyltransferase YE105_RS08000 PF08029 HisG, C-terminal domain YE105_RS08005 PF01370 NAD dependent epimerase/dehydratase family YE105_RS08015 PF02653 Branched-chain amino acid transport system / permease component YE105_RS08020 PF00005 ABC transporter YE105_RS08035 PF13520 Amino acid permease YE105_RS08040 PF08411 Exonuclease C-terminal YE105_RS08040 PF00929 Exonuclease YE105_RS08045 PF00550 Phosphopantetheine attachment site YE105_RS08045 PF07993 Male sterility protein YE105_RS08045 PF00501 AMP-binding enzyme YE105_RS08050 PF04632 Fusaric acid resistance protein family YE105_RS08055 PF04363 Protein of unknown function (DUF496) YE105_RS08060 PF02653 Branched-chain amino acid transport system / permease component YE105_RS08065 PF02653 Branched-chain amino acid transport system / permease component YE105_RS08070 PF00005 ABC transporter YE105_RS08075 PF13407 Periplasmic binding protein domain YE105_RS08080 PF00288 GHMP kinases N terminal domain YE105_RS08085 PF00155 Aminotransferase class I and II YE105_RS08090 PF10414 Sirohaem synthase dimerisation region YE105_RS08090 PF14824 Sirohaem biosynthesis protein central YE105_RS08090 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YE105_RS08095 PF00871 Acetokinase family YE105_RS08100 PF10662 Ethanolamine utilisation - propanediol utilisation YE105_RS08105 PF00936 BMC domain YE105_RS08115 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit YE105_RS08115 PF13375 RnfC Barrel sandwich hybrid domain YE105_RS08115 PF10531 SLBB domain YE105_RS08115 PF13237 4Fe-4S dicluster domain YE105_RS08120 PF00465 Iron-containing alcohol dehydrogenase YE105_RS08125 PF00171 Aldehyde dehydrogenase family YE105_RS08130 PF01923 Cobalamin adenosyltransferase YE105_RS08135 PF03319 Ethanolamine utilisation protein EutN/carboxysome YE105_RS08145 PF06130 Phosphate propanoyltransferase YE105_RS08155 PF00936 BMC domain YE105_RS08165 PF18427 DD-reactivating factor swiveling domain YE105_RS08165 PF08841 Diol dehydratase reactivase ATPase-like domain YE105_RS08170 PF02287 Dehydratase small subunit YE105_RS08175 PF02288 Dehydratase medium subunit YE105_RS08180 PF02286 Dehydratase large subunit YE105_RS08185 PF00936 BMC domain YE105_RS08190 PF00936 BMC domain YE105_RS08195 PF00230 Major intrinsic protein YE105_RS08200 PF12833 Helix-turn-helix domain YE105_RS08200 PF10114 Sensory domain found in PocR YE105_RS08205 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain YE105_RS08205 PF07685 CobB/CobQ-like glutamine amidotransferase domain YE105_RS08210 PF03186 CobD/Cbib protein YE105_RS08215 PF02570 Precorrin-8X methylmutase YE105_RS08220 PF01888 CbiD YE105_RS08225 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YE105_RS08230 PF05175 Methyltransferase small domain YE105_RS08235 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YE105_RS08240 PF11761 Cobalamin biosynthesis central region YE105_RS08240 PF11760 Cobalamin synthesis G N-terminal YE105_RS08240 PF01890 Cobalamin synthesis G C-terminus YE105_RS08245 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YE105_RS08250 PF02571 Precorrin-6x reductase CbiJ/CobK YE105_RS08255 PF06180 Cobalt chelatase (CbiK) YE105_RS08260 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YE105_RS08265 PF01891 Cobalt uptake substrate-specific transmembrane region YE105_RS08270 PF02553 Cobalt transport protein component CbiN YE105_RS08275 PF02361 Cobalt transport protein YE105_RS08280 PF00005 ABC transporter YE105_RS08285 PF07685 CobB/CobQ-like glutamine amidotransferase domain YE105_RS08290 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase YE105_RS08295 PF02654 Cobalamin-5-phosphate synthase YE105_RS08300 PF00300 Histidine phosphatase superfamily (branch 1) YE105_RS08305 PF02277 Phosphoribosyltransferase YE105_RS08360 PF05947 Type VI secretion system, TssF YE105_RS08365 PF00004 ATPase family associated with various cellular activities (AAA) YE105_RS08365 PF07724 AAA domain (Cdc48 subfamily) YE105_RS08365 PF17871 AAA lid domain YE105_RS08365 PF10431 C-terminal, D2-small domain, of ClpB protein YE105_RS08370 PF00419 Fimbrial protein YE105_RS08375 PF02753 Pili assembly chaperone PapD, C-terminal domain YE105_RS08375 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain YE105_RS08380 PF00577 Outer membrane usher protein YE105_RS08380 PF13954 PapC N-terminal domain YE105_RS08380 PF13953 PapC C-terminal domain YE105_RS08390 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 YE105_RS08395 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath YE105_RS08410 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE YE105_RS08420 PF06744 Type VI secretion protein IcmF C-terminal YE105_RS08420 PF14331 ImcF-related N-terminal domain YE105_RS08420 PF06761 Intracellular multiplication and human macrophage-killing YE105_RS08425 PF04717 Type VI secretion system, phage-baseplate injector YE105_RS08440 PF07024 ImpE protein YE105_RS08450 PF00764 Arginosuccinate synthase YE105_RS08455 PF01554 MatE YE105_RS08465 PF02581 Thiamine monophosphate synthase YE105_RS08475 PF00455 DeoR C terminal sensor domain YE105_RS08475 PF08220 DeoR-like helix-turn-helix domain YE105_RS08480 PF00144 Beta-lactamase YE105_RS08485 PF01584 CheW-like domain YE105_RS08485 PF00072 Response regulator receiver domain YE105_RS08495 PF00106 short chain dehydrogenase YE105_RS08505 PF02558 Ketopantoate reductase PanE/ApbA YE105_RS08505 PF08546 Ketopantoate reductase PanE/ApbA C terminal YE105_RS08515 PF08402 TOBE domain YE105_RS08515 PF00005 ABC transporter YE105_RS08520 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS08530 PF07690 Major Facilitator Superfamily YE105_RS08535 PF05231 MASE1 YE105_RS08535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YE105_RS08535 PF07730 Histidine kinase YE105_RS08540 PF00196 Bacterial regulatory proteins, luxR family YE105_RS08540 PF00072 Response regulator receiver domain YE105_RS08545 PF00072 Response regulator receiver domain YE105_RS08545 PF12431 Transcriptional regulator YE105_RS08550 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain YE105_RS08550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YE105_RS08550 PF17203 Single cache domain 3 YE105_RS08550 PF00989 PAS fold YE105_RS08555 PF08218 Citrate lyase ligase C-terminal domain YE105_RS08560 PF06857 Malonate decarboxylase delta subunit (MdcD) YE105_RS08565 PF03328 HpcH/HpaI aldolase/citrate lyase family YE105_RS08570 PF04223 Citrate lyase, alpha subunit (CitF) YE105_RS08575 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase YE105_RS08575 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase YE105_RS08580 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase YE105_RS08585 PF00939 Sodium:sulfate symporter transmembrane region YE105_RS08590 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component YE105_RS08600 PF03480 Bacterial extracellular solute-binding protein, family 7 YE105_RS08610 PF17837 4'-phosphopantetheinyl transferase N-terminal domain YE105_RS08610 PF01648 4'-phosphopantetheinyl transferase superfamily YE105_RS08620 PF00083 Sugar (and other) transporter YE105_RS08625 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YE105_RS08625 PF00381 PTS HPr component phosphorylation site YE105_RS08630 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) YE105_RS08635 PF00849 RNA pseudouridylate synthase YE105_RS08650 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain YE105_RS08650 PF02753 Pili assembly chaperone PapD, C-terminal domain YE105_RS08660 PF13954 PapC N-terminal domain YE105_RS08660 PF13953 PapC C-terminal domain YE105_RS08660 PF00577 Outer membrane usher protein YE105_RS08665 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain YE105_RS08665 PF02753 Pili assembly chaperone PapD, C-terminal domain YE105_RS08675 PF00989 PAS fold YE105_RS08675 PF01627 Hpt domain YE105_RS08675 PF00512 His Kinase A (phospho-acceptor) domain YE105_RS08675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YE105_RS08675 PF00497 Bacterial extracellular solute-binding proteins, family 3 YE105_RS08675 PF00072 Response regulator receiver domain YE105_RS08680 PF00072 Response regulator receiver domain YE105_RS08680 PF00196 Bacterial regulatory proteins, luxR family YE105_RS08690 PF06167 Glucose-regulated metallo-peptidase M90 YE105_RS08700 PF02782 FGGY family of carbohydrate kinases, C-terminal domain YE105_RS08700 PF00370 FGGY family of carbohydrate kinases, N-terminal domain YE105_RS08720 PF13954 PapC N-terminal domain YE105_RS08720 PF13953 PapC C-terminal domain YE105_RS08720 PF00577 Outer membrane usher protein YE105_RS08725 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain YE105_RS08740 PF00328 Histidine phosphatase superfamily (branch 2) YE105_RS08745 PF14001 YdfZ protein YE105_RS08760 PF10777 Inner membrane protein YlaC YE105_RS08765 PF08659 KR domain YE105_RS08765 PF00107 Zinc-binding dehydrogenase YE105_RS08765 PF00698 Acyl transferase domain YE105_RS08765 PF08240 Alcohol dehydrogenase GroES-like domain YE105_RS08765 PF16197 Ketoacyl-synthetase C-terminal extension YE105_RS08765 PF14765 Polyketide synthase dehydratase YE105_RS08765 PF00550 Phosphopantetheine attachment site YE105_RS08765 PF00109 Beta-ketoacyl synthase, N-terminal domain YE105_RS08765 PF02801 Beta-ketoacyl synthase, C-terminal domain YE105_RS08775 PF02837 Glycosyl hydrolases family 2, sugar binding domain YE105_RS08775 PF02836 Glycosyl hydrolases family 2, TIM barrel domain YE105_RS08775 PF02929 Beta galactosidase small chain YE105_RS08775 PF00703 Glycosyl hydrolases family 2 YE105_RS08775 PF16353 Domain of unknown function(DUF4981) YE105_RS08780 PF00356 Bacterial regulatory proteins, lacI family YE105_RS08785 PF00313 'Cold-shock' DNA-binding domain YE105_RS08790 PF10781 Dextransucrase DSRB YE105_RS08795 PF02203 Tar ligand binding domain homologue YE105_RS08795 PF00672 HAMP domain YE105_RS08795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YE105_RS08810 PF02308 MgtC family YE105_RS08815 PF00690 Cation transporter/ATPase, N-terminus YE105_RS08815 PF00689 Cation transporting ATPase, C-terminus YE105_RS08820 PF00107 Zinc-binding dehydrogenase YE105_RS08820 PF16884 N-terminal domain of oxidoreductase YE105_RS08825 PF00582 Universal stress protein family YE105_RS08830 PF05247 Flagellar transcriptional activator (FlhD) YE105_RS08835 PF05280 Flagellar transcriptional activator (FlhC) YE105_RS08840 PF01618 MotA/TolQ/ExbB proton channel family YE105_RS08845 PF13677 Membrane MotB of proton-channel complex MotA/MotB YE105_RS08845 PF00691 OmpA family YE105_RS08850 PF02895 Signal transducing histidine kinase, homodimeric domain YE105_RS08850 PF01627 Hpt domain YE105_RS08850 PF01584 CheW-like domain YE105_RS08850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YE105_RS08850 PF09078 CheY binding YE105_RS08855 PF01584 CheW-like domain YE105_RS08860 PF02203 Tar ligand binding domain homologue YE105_RS08860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YE105_RS08860 PF00672 HAMP domain YE105_RS08865 PF00672 HAMP domain YE105_RS08865 PF02203 Tar ligand binding domain homologue YE105_RS08865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YE105_RS08870 PF03705 CheR methyltransferase, all-alpha domain YE105_RS08870 PF01739 CheR methyltransferase, SAM binding domain YE105_RS08875 PF00072 Response regulator receiver domain YE105_RS08875 PF01339 CheB methylesterase YE105_RS08880 PF00072 Response regulator receiver domain YE105_RS08885 PF04344 Chemotaxis phosphatase, CheZ YE105_RS08890 PF00082 Subtilase family YE105_RS08890 PF01483 Proprotein convertase P-domain YE105_RS08895 PF01312 FlhB HrpN YscU SpaS Family YE105_RS08900 PF00771 FHIPEP family YE105_RS08905 PF06366 Flagellar protein FlhE YE105_RS08910 PF02369 Bacterial Ig-like domain (group 1) YE105_RS08910 PF09134 Invasin, domain 3 YE105_RS08910 PF07979 Intimin C-type lectin domain YE105_RS08910 PF11924 Inverse autotransporter, beta-domain YE105_RS08915 PF05130 FlgN protein YE105_RS08920 PF04316 Anti-sigma-28 factor, FlgM YE105_RS08925 PF17656 FlgA N-terminal domain YE105_RS08925 PF13144 Chaperone for flagella basal body P-ring formation YE105_RS08930 PF00460 Flagella basal body rod protein YE105_RS08935 PF00460 Flagella basal body rod protein YE105_RS08935 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YE105_RS08940 PF13861 FlgD Tudor-like domain YE105_RS08940 PF13860 FlgD Ig-like domain YE105_RS08940 PF03963 Flagellar hook capping protein - N-terminal region YE105_RS08945 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YE105_RS08945 PF07559 Flagellar basal body protein FlaE YE105_RS08945 PF00460 Flagella basal body rod protein YE105_RS08950 PF00460 Flagella basal body rod protein YE105_RS08950 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YE105_RS08955 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YE105_RS08955 PF00460 Flagella basal body rod protein YE105_RS08960 PF02107 Flagellar L-ring protein YE105_RS08965 PF02119 Flagellar P-ring protein YE105_RS08970 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase YE105_RS08970 PF10135 Rod binding protein YE105_RS08975 PF00460 Flagella basal body rod protein YE105_RS08975 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YE105_RS08980 PF00669 Bacterial flagellin N-terminal helical region YE105_RS08985 PF01311 Bacterial export proteins, family 1 YE105_RS08990 PF01313 Bacterial export proteins, family 3 YE105_RS08995 PF00813 FliP family YE105_RS09000 PF04347 Flagellar biosynthesis protein, FliO YE105_RS09005 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term YE105_RS09005 PF16973 Flagellar motor switch protein FliN N-terminal YE105_RS09010 PF02154 Flagellar motor switch protein FliM YE105_RS09010 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term YE105_RS09015 PF03748 Flagellar basal body-associated protein FliL YE105_RS09020 PF02120 Flagellar hook-length control protein FliK YE105_RS09025 PF02050 Flagellar FliJ protein YE105_RS09030 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain YE105_RS09030 PF18269 T3SS EscN ATPase C-terminal domain YE105_RS09035 PF02108 Flagellar assembly protein FliH YE105_RS09040 PF14842 FliG N-terminal domain YE105_RS09040 PF14841 FliG middle domain YE105_RS09040 PF01706 FliG C-terminal domain YE105_RS09045 PF08345 Flagellar M-ring protein C-terminal YE105_RS09045 PF01514 Secretory protein of YscJ/FliF family YE105_RS09050 PF02049 Flagellar hook-basal body complex protein FliE YE105_RS09075 PF06183 DinI-like family YE105_RS09085 PF00730 HhH-GPD superfamily base excision DNA repair protein YE105_RS09090 PF01966 HD domain YE105_RS09095 PF12833 Helix-turn-helix domain YE105_RS09100 PF05400 Flagellar protein FliT YE105_RS09105 PF02561 Flagellar protein FliS YE105_RS09110 PF07196 Flagellin hook IN motif YE105_RS09110 PF02465 Flagellar hook-associated protein 2 N-terminus YE105_RS09110 PF07195 Flagellar hook-associated protein 2 C-terminus YE105_RS09115 PF00700 Bacterial flagellin C-terminal helical region YE105_RS09115 PF08884 Flagellin D3 domain YE105_RS09115 PF00669 Bacterial flagellin N-terminal helical region YE105_RS09120 PF08884 Flagellin D3 domain YE105_RS09120 PF00669 Bacterial flagellin N-terminal helical region YE105_RS09120 PF00700 Bacterial flagellin C-terminal helical region YE105_RS09125 PF00700 Bacterial flagellin C-terminal helical region YE105_RS09125 PF08884 Flagellin D3 domain YE105_RS09125 PF00669 Bacterial flagellin N-terminal helical region YE105_RS09135 PF04542 Sigma-70 region 2 YE105_RS09135 PF04539 Sigma-70 region 3 YE105_RS09135 PF04545 Sigma-70, region 4 YE105_RS09140 PF02899 Phage integrase, N-terminal SAM-like domain YE105_RS09145 PF00291 Pyridoxal-phosphate dependent enzyme YE105_RS09150 PF00497 Bacterial extracellular solute-binding proteins, family 3 YE105_RS09155 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS09160 PF00005 ABC transporter YE105_RS09175 PF01619 Proline dehydrogenase YE105_RS09175 PF14850 DNA-binding domain of Proline dehydrogenase YE105_RS09175 PF00171 Aldehyde dehydrogenase family YE105_RS09175 PF18327 Proline utilization A proline dehydrogenase N-terminal domain YE105_RS09180 PF00474 Sodium:solute symporter family YE105_RS09190 PF05638 Type VI secretion system effector, Hcp YE105_RS09200 PF03239 Iron permease FTR1 family YE105_RS09205 PF09375 Imelysin YE105_RS09205 PF13473 Cupredoxin-like domain YE105_RS09210 PF04261 Dyp-type peroxidase family YE105_RS09215 PF03358 NADPH-dependent FMN reductase YE105_RS09225 PF01344 Kelch motif YE105_RS09240 PF01613 Flavin reductase like domain YE105_RS09245 PF00881 Nitroreductase family YE105_RS09250 PF12697 Alpha/beta hydrolase family YE105_RS09255 PF01042 Endoribonuclease L-PSP YE105_RS09260 PF00857 Isochorismatase family YE105_RS09265 PF00296 Luciferase-like monooxygenase YE105_RS09270 PF00440 Bacterial regulatory proteins, tetR family YE105_RS09270 PF08362 YcdC-like protein, C-terminal region YE105_RS09275 PF00324 Amino acid permease YE105_RS09285 PF00589 Phage integrase family YE105_RS09290 PF01527 Transposase YE105_RS09300 PF08241 Methyltransferase domain YE105_RS09315 PF02806 Alpha amylase, C-terminal all-beta domain YE105_RS09315 PF00128 Alpha amylase, catalytic domain YE105_RS09325 PF06942 GlpM protein YE105_RS09330 PF10769 Protein of unknown function (DUF2594) YE105_RS09335 PF00196 Bacterial regulatory proteins, luxR family YE105_RS09335 PF00072 Response regulator receiver domain YE105_RS09340 PF01541 GIY-YIG catalytic domain YE105_RS09340 PF02151 UvrB/uvrC motif YE105_RS09340 PF08459 UvrC Helix-hairpin-helix N-terminal YE105_RS09345 PF01066 CDP-alcohol phosphatidyltransferase YE105_RS09365 PF04606 Ogr/Delta-like zinc finger YE105_RS09400 PF17482 Phage tail sheath C-terminal domain YE105_RS09400 PF04984 Phage tail sheath protein subtilisin-like domain YE105_RS09410 PF04754 Putative transposase, YhgA-like YE105_RS09430 PF04221 RelB antitoxin YE105_RS09435 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ YE105_RS09450 PF07484 Phage Tail Collar Domain YE105_RS09525 PF01527 Transposase YE105_RS09535 PF00872 Transposase, Mutator family YE105_RS09545 PF03466 LysR substrate binding domain YE105_RS09545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YE105_RS09555 PF00132 Bacterial transferase hexapeptide (six repeats) YE105_RS09570 PF06530 Phage antitermination protein Q YE105_RS09575 PF10753 Toxin GhoT_OrtT YE105_RS09585 PF00959 Phage lysozyme YE105_RS09590 PF00561 alpha/beta hydrolase fold YE105_RS09595 PF04391 Protein of unknown function (DUF533) YE105_RS09600 PF03466 LysR substrate binding domain YE105_RS09600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YE105_RS09605 PF00144 Beta-lactamase YE105_RS09610 PF01926 50S ribosome-binding GTPase YE105_RS09610 PF06071 Protein of unknown function (DUF933) YE105_RS09620 PF01195 Peptidyl-tRNA hydrolase YE105_RS09625 PF10762 Protein of unknown function (DUF2583) YE105_RS09635 PF14572 Phosphoribosyl synthetase-associated domain YE105_RS09635 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase YE105_RS09640 PF08544 GHMP kinases C terminal YE105_RS09640 PF00288 GHMP kinases N terminal domain YE105_RS09645 PF03550 Outer membrane lipoprotein LolB YE105_RS09650 PF01488 Shikimate / quinate 5-dehydrogenase YE105_RS09650 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain YE105_RS09650 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain YE105_RS09655 PF03462 PCRF domain YE105_RS09655 PF00472 RF-1 domain YE105_RS09660 PF17827 PrmC N-terminal domain YE105_RS09660 PF13847 Methyltransferase domain YE105_RS09665 PF04247 Invasion gene expression up-regulator, SirB YE105_RS09670 PF13369 Transglutaminase-like superfamily YE105_RS09675 PF00793 DAHP synthetase I family YE105_RS09680 PF00916 Sulfate permease family YE105_RS09680 PF01740 STAS domain YE105_RS09685 PF00990 Diguanylate cyclase, GGDEF domain YE105_RS09695 PF03009 Glycerophosphoryl diester phosphodiesterase family YE105_RS09705 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YE105_RS09710 PF02811 PHP domain YE105_RS09715 PF02613 Nitrate reductase delta subunit YE105_RS09720 PF07273 Protein of unknown function (DUF1439) YE105_RS09725 PF07690 Major Facilitator Superfamily YE105_RS09740 PF13302 Acetyltransferase (GNAT) domain YE105_RS09745 PF04337 Protein of unknown function, DUF480 YE105_RS09750 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YE105_RS09755 PF03023 Lipid II flippase MurJ YE105_RS09760 PF01699 Sodium/calcium exchanger protein YE105_RS09775 PF03466 LysR substrate binding domain YE105_RS09775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YE105_RS09780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YE105_RS09780 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term YE105_RS09780 PF00672 HAMP domain YE105_RS09780 PF07730 Histidine kinase YE105_RS09785 PF02322 Cytochrome bd terminal oxidase subunit II YE105_RS09790 PF01654 Cytochrome bd terminal oxidase subunit I YE105_RS09795 PF00155 Aminotransferase class I and II YE105_RS09795 PF00392 Bacterial regulatory proteins, gntR family YE105_RS09800 PF00202 Aminotransferase class-III YE105_RS09805 PF04958 Arginine N-succinyltransferase beta subunit YE105_RS09810 PF00171 Aldehyde dehydrogenase family YE105_RS09815 PF04996 Succinylarginine dihydrolase YE105_RS09820 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family YE105_RS09825 PF00267 Gram-negative porin YE105_RS09845 PF01979 Amidohydrolase family YE105_RS09850 PF07702 UTRA domain YE105_RS09850 PF00392 Bacterial regulatory proteins, gntR family YE105_RS09855 PF01979 Amidohydrolase family YE105_RS09860 PF05962 HutD YE105_RS09865 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment YE105_RS09890 PF01476 LysM domain YE105_RS09890 PF01551 Peptidase family M23 YE105_RS09895 PF01116 Fructose-bisphosphate aldolase class-II YE105_RS09900 PF01380 SIS domain YE105_RS09905 PF03610 PTS system fructose IIA component YE105_RS09910 PF03613 PTS system mannose/fructose/sorbose family IID component YE105_RS09915 PF03609 PTS system sorbose-specific iic component YE105_RS09920 PF03830 PTS system sorbose subfamily IIB component YE105_RS09925 PF08013 Tagatose 6 phosphate kinase YE105_RS09930 PF00455 DeoR C terminal sensor domain YE105_RS09930 PF08220 DeoR-like helix-turn-helix domain YE105_RS09950 PF01479 S4 domain YE105_RS09950 PF00849 RNA pseudouridylate synthase YE105_RS09955 PF03616 Sodium/glutamate symporter YE105_RS09965 PF01548 Transposase YE105_RS09965 PF02371 Transposase IS116/IS110/IS902 family YE105_RS09970 PF01548 Transposase YE105_RS09970 PF02371 Transposase IS116/IS110/IS902 family YE105_RS09975 PF08003 Protein of unknown function (DUF1698) YE105_RS09980 PF13649 Methyltransferase domain YE105_RS09985 PF01124 MAPEG family YE105_RS09990 PF01904 Protein of unknown function DUF72 YE105_RS09995 PF00857 Isochorismatase family YE105_RS10005 PF01336 OB-fold nucleic acid binding domain YE105_RS10005 PF00152 tRNA synthetases class II (D, K and N) YE105_RS10005 PF02938 GAD domain YE105_RS10010 PF00293 NUDIX domain YE105_RS10015 PF01709 Transcriptional regulator YE105_RS10020 PF02075 Crossover junction endodeoxyribonuclease RuvC YE105_RS10025 PF07499 RuvA, C-terminal domain YE105_RS10025 PF01330 RuvA N terminal domain YE105_RS10030 PF17864 RuvB AAA lid domain YE105_RS10030 PF05496 Holliday junction DNA helicase RuvB P-loop domain YE105_RS10030 PF05491 RuvB C-terminal winged helix domain YE105_RS10035 PF00854 POT family YE105_RS10040 PF00950 ABC 3 transport family YE105_RS10045 PF00005 ABC transporter YE105_RS10050 PF01297 Zinc-uptake complex component A periplasmic YE105_RS10055 PF08525 Opacity-associated protein A N-terminal motif YE105_RS10055 PF01551 Peptidase family M23 YE105_RS10055 PF01476 LysM domain YE105_RS10060 PF03279 Bacterial lipid A biosynthesis acyltransferase YE105_RS10075 PF00872 Transposase, Mutator family YE105_RS10080 PF02887 Pyruvate kinase, alpha/beta domain YE105_RS10080 PF00224 Pyruvate kinase, barrel domain YE105_RS10085 PF01380 SIS domain YE105_RS10085 PF01418 Helix-turn-helix domain, rpiR family YE105_RS10090 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain YE105_RS10090 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain YE105_RS10095 PF01081 KDPG and KHG aldolase YE105_RS10100 PF00893 Small Multidrug Resistance protein YE105_RS10105 PF00893 Small Multidrug Resistance protein YE105_RS10110 PF01042 Endoribonuclease L-PSP YE105_RS10115 PF13307 Helicase C-terminal domain YE105_RS10115 PF04851 Type III restriction enzyme, res subunit YE105_RS10120 PF00814 Glycoprotease family YE105_RS10125 PF03843 Outer membrane lipoprotein Slp family YE105_RS10130 PF00501 AMP-binding enzyme YE105_RS10130 PF13193 AMP-binding enzyme C-terminal domain YE105_RS10135 PF01612 3'-5' exonuclease YE105_RS10135 PF00570 HRDC domain YE105_RS10140 PF03776 Septum formation topological specificity factor MinE YE105_RS10145 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain YE105_RS10150 PF05209 Septum formation inhibitor MinC, N-terminal domain YE105_RS10150 PF03775 Septum formation inhibitor MinC, C-terminal domain YE105_RS10160 PF05166 YcgL domain YE105_RS10165 PF13406 Transglycosylase SLT domain YE105_RS10170 PF01557 Fumarylacetoacetate (FAA) hydrolase family YE105_RS10175 PF03692 Putative zinc- or iron-chelating domain YE105_RS10205 PF00924 Mechanosensitive ion channel YE105_RS10210 PF14834 Glutathione S-transferase, C-terminal domain YE105_RS10210 PF02798 Glutathione S-transferase, N-terminal domain YE105_RS10230 PF07351 Protein of unknown function (DUF1480) YE105_RS10235 PF00360 Phytochrome region YE105_RS10235 PF00990 Diguanylate cyclase, GGDEF domain YE105_RS10235 PF01590 GAF domain YE105_RS10235 PF00563 EAL domain YE105_RS10270 PF07690 Major Facilitator Superfamily YE105_RS10275 PF03466 LysR substrate binding domain YE105_RS10275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YE105_RS10280 PF02470 MlaD protein YE105_RS10285 PF04403 Paraquat-inducible protein A YE105_RS10290 PF13185 GAF domain YE105_RS10295 PF17516 ProQ C-terminal domain YE105_RS10295 PF04352 ProQ/FINO family YE105_RS10300 PF17804 Tail specific protease N-terminal domain YE105_RS10300 PF03572 Peptidase family S41 YE105_RS10300 PF00595 PDZ domain YE105_RS10300 PF11818 C-terminal domain of tail specific protease (DUF3340) YE105_RS10305 PF01435 Peptidase family M48 YE105_RS10315 PF07690 Major Facilitator Superfamily YE105_RS10320 PF14583 Oligogalacturonate lyase YE105_RS10325 PF01614 Bacterial transcriptional regulator YE105_RS10325 PF09339 IclR helix-turn-helix domain YE105_RS10330 PF01510 N-acetylmuramoyl-L-alanine amidase YE105_RS10335 PF00375 Sodium:dicarboxylate symporter family YE105_RS10340 PF04307 LexA-binding, inner membrane-associated putative hydrolase YE105_RS10350 PF06178 Oligogalacturonate-specific porin protein (KdgM) YE105_RS10355 PF01547 Bacterial extracellular solute-binding protein YE105_RS10360 PF17912 MalK OB fold domain YE105_RS10360 PF03459 TOBE domain YE105_RS10360 PF00005 ABC transporter YE105_RS10365 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS10370 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS10375 PF06917 Periplasmic pectate lyase YE105_RS10385 PF04962 KduI/IolB family YE105_RS10390 PF07883 Cupin domain YE105_RS10395 PF13419 Haloacid dehalogenase-like hydrolase YE105_RS10400 PF14002 YniB-like protein YE105_RS10405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YE105_RS10405 PF03466 LysR substrate binding domain YE105_RS10410 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain YE105_RS10410 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain YE105_RS10415 PF00378 Enoyl-CoA hydratase/isomerase YE105_RS10425 PF02310 B12 binding domain YE105_RS10425 PF01642 Methylmalonyl-CoA mutase YE105_RS10430 PF03881 Fructosamine kinase YE105_RS10435 PF00950 ABC 3 transport family YE105_RS10440 PF00950 ABC 3 transport family YE105_RS10445 PF00005 ABC transporter YE105_RS10450 PF01297 Zinc-uptake complex component A periplasmic YE105_RS10455 PF01464 Transglycosylase SLT domain YE105_RS10460 PF01914 MarC family integral membrane protein YE105_RS10485 PF04474 Protein of unknown function (DUF554) YE105_RS10490 PF13619 KTSC domain YE105_RS10495 PF02824 TGS domain YE105_RS10495 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) YE105_RS10495 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain YE105_RS10495 PF03129 Anticodon binding domain YE105_RS10500 PF00707 Translation initiation factor IF-3, C-terminal domain YE105_RS10500 PF05198 Translation initiation factor IF-3, N-terminal domain YE105_RS10505 PF01632 Ribosomal protein L35 YE105_RS10510 PF00453 Ribosomal protein L20 YE105_RS10515 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain YE105_RS10515 PF01409 tRNA synthetases class II core domain (F) YE105_RS10520 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain YE105_RS10520 PF01588 Putative tRNA binding domain YE105_RS10520 PF03147 Ferredoxin-fold anticodon binding domain YE105_RS10520 PF03484 tRNA synthetase B5 domain YE105_RS10520 PF03483 B3/4 domain YE105_RS10525 PF00216 Bacterial DNA-binding protein YE105_RS10540 PF01032 FecCD transport family YE105_RS10545 PF00255 Glutathione peroxidase YE105_RS10550 PF00005 ABC transporter YE105_RS10555 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family YE105_RS10560 PF00535 Glycosyl transferase family 2 YE105_RS10565 PF02911 Formyl transferase, C-terminal domain YE105_RS10565 PF01370 NAD dependent epimerase/dehydratase family YE105_RS10565 PF00551 Formyl transferase YE105_RS10570 PF01522 Polysaccharide deacetylase YE105_RS10575 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase YE105_RS10580 PF00892 EamA-like transporter family YE105_RS10590 PF00877 NlpC/P60 family YE105_RS10595 PF10437 Bacterial lipoate protein ligase C-terminus YE105_RS10595 PF03099 Biotin/lipoate A/B protein ligase family YE105_RS10600 PF02696 Uncharacterized ACR, YdiU/UPF0061 family YE105_RS10605 PF01497 Periplasmic binding protein YE105_RS10610 PF05171 Haemin-degrading HemS.ChuX domain YE105_RS10615 PF07715 TonB-dependent Receptor Plug Domain YE105_RS10615 PF00593 TonB dependent receptor YE105_RS10620 PF10636 Hemin uptake protein hemP YE105_RS10625 PF00793 DAHP synthetase I family YE105_RS10630 PF03618 Kinase/pyrophosphorylase YE105_RS10635 PF02896 PEP-utilising enzyme, TIM barrel domain YE105_RS10635 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain YE105_RS10635 PF00391 PEP-utilising enzyme, mobile domain YE105_RS10640 PF01594 AI-2E family transporter YE105_RS10645 PF13183 4Fe-4S dicluster domain YE105_RS10645 PF01565 FAD binding domain YE105_RS10645 PF02913 FAD linked oxidases, C-terminal domain YE105_RS10650 PF03061 Thioesterase superfamily YE105_RS10655 PF01521 Iron-sulphur cluster biosynthesis YE105_RS10660 PF01458 Uncharacterized protein family (UPF0051) YE105_RS10665 PF00005 ABC transporter YE105_RS10670 PF01458 Uncharacterized protein family (UPF0051) YE105_RS10675 PF00266 Aminotransferase class-V YE105_RS10680 PF02657 Fe-S metabolism associated domain YE105_RS10685 PF01476 LysM domain YE105_RS10685 PF17969 L,D-transpeptidase C-terminal domain YE105_RS10685 PF03734 L,D-transpeptidase catalytic domain YE105_RS10690 PF04728 Lipoprotein leucine-zipper YE105_RS10700 PF00224 Pyruvate kinase, barrel domain YE105_RS10700 PF02887 Pyruvate kinase, alpha/beta domain YE105_RS10710 PF01554 MatE YE105_RS10715 PF00677 Lumazine binding domain YE105_RS10725 PF07690 Major Facilitator Superfamily YE105_RS10730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YE105_RS10730 PF03466 LysR substrate binding domain YE105_RS10735 PF00356 Bacterial regulatory proteins, lacI family YE105_RS10740 PF02777 Iron/manganese superoxide dismutases, C-terminal domain YE105_RS10740 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain YE105_RS10745 PF00877 NlpC/P60 family YE105_RS10750 PF00462 Glutaredoxin YE105_RS10755 PF00929 Exonuclease YE105_RS10760 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YE105_RS10765 PF00724 NADH:flavin oxidoreductase / NADH oxidase family YE105_RS10770 PF00440 Bacterial regulatory proteins, tetR family YE105_RS10770 PF16925 Tetracyclin repressor-like, C-terminal domain YE105_RS10775 PF08019 Phosphoethanolamine transferase EptA/EptB YE105_RS10775 PF00884 Sulfatase YE105_RS10780 PF06945 Protein of unknown function (DUF1289) YE105_RS10785 PF00248 Aldo/keto reductase family YE105_RS10790 PF04632 Fusaric acid resistance protein family YE105_RS10795 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YE105_RS10795 PF00529 HlyD membrane-fusion protein of T1SS YE105_RS10800 PF07869 Protein of unknown function (DUF1656) YE105_RS10805 PF01047 MarR family YE105_RS10810 PF05433 Glycine zipper 2TM domain YE105_RS10815 PF03702 Anhydro-N-acetylmuramic acid kinase YE105_RS10820 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme YE105_RS10825 PF01243 Pyridoxamine 5'-phosphate oxidase YE105_RS10825 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region YE105_RS10830 PF00579 tRNA synthetases class I (W and Y) YE105_RS10830 PF01479 S4 domain YE105_RS10835 PF08543 Phosphomethylpyrimidine kinase YE105_RS10840 PF02798 Glutathione S-transferase, N-terminal domain YE105_RS10840 PF00043 Glutathione S-transferase, C-terminal domain YE105_RS10845 PF11656 YjbD family (DUF3811) YE105_RS10850 PF04893 Yip1 domain YE105_RS10860 PF00854 POT family YE105_RS10865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YE105_RS10865 PF03466 LysR substrate binding domain YE105_RS10880 PF00005 ABC transporter YE105_RS10885 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YE105_RS10885 PF00005 ABC transporter YE105_RS10890 PF12911 N-terminal TM domain of oligopeptide transport permease C YE105_RS10890 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS10895 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS10900 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YE105_RS10910 PF02917 Pertussis toxin, subunit 1 YE105_RS10920 PF00158 Sigma-54 interaction domain YE105_RS10920 PF02954 Bacterial regulatory protein, Fis family YE105_RS10925 PF04012 PspA/IM30 family YE105_RS10930 PF06667 Phage shock protein B YE105_RS10935 PF04024 PspC domain YE105_RS10945 PF04317 YcjX-like family, DUF463 YE105_RS10950 PF05128 Domain of unknown function (DUF697) YE105_RS10955 PF08808 RES domain YE105_RS10960 PF09722 Protein of unknown function (DUF2384) YE105_RS10965 PF00158 Sigma-54 interaction domain YE105_RS10965 PF18024 Helix-turn-helix domain YE105_RS10970 PF08534 Redoxin YE105_RS10975 PF13378 Enolase C-terminal domain-like YE105_RS10975 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YE105_RS10980 PF00246 Zinc carboxypeptidase YE105_RS10985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YE105_RS10990 PF01544 CorA-like Mg2+ transporter protein YE105_RS10995 PF01171 PP-loop family YE105_RS11000 PF00388 Phosphatidylinositol-specific phospholipase C, X domain YE105_RS11005 PF10371 Domain of unknown function YE105_RS11005 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YE105_RS11005 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II YE105_RS11005 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase YE105_RS11005 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg YE105_RS11010 PF00893 Small Multidrug Resistance protein YE105_RS11015 PF02308 MgtC family YE105_RS11020 PF03891 Domain of unknown function (DUF333) YE105_RS11025 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YE105_RS11025 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YE105_RS11030 PF11739 Dicarboxylate transport YE105_RS11035 PF13617 YnbE-like lipoprotein YE105_RS11040 PF07027 Protein of unknown function (DUF1318) YE105_RS11045 PF02525 Flavodoxin-like fold YE105_RS11050 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold YE105_RS11050 PF00271 Helicase conserved C-terminal domain YE105_RS11050 PF11898 Domain of unknown function (DUF3418) YE105_RS11050 PF00270 DEAD/DEAH box helicase YE105_RS11050 PF04408 Helicase associated domain (HA2) YE105_RS11065 PF00089 Trypsin YE105_RS11075 PF02074 Carboxypeptidase Taq (M32) metallopeptidase YE105_RS11080 PF00512 His Kinase A (phospho-acceptor) domain YE105_RS11080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YE105_RS11080 PF00672 HAMP domain YE105_RS11085 PF00486 Transcriptional regulatory protein, C terminal YE105_RS11085 PF00072 Response regulator receiver domain YE105_RS11095 PF13520 Amino acid permease YE105_RS11100 PF07338 Protein of unknown function (DUF1471) YE105_RS11110 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch YE105_RS11110 PF05222 Alanine dehydrogenase/PNT, N-terminal domain YE105_RS11110 PF01262 Alanine dehydrogenase/PNT, C-terminal domain YE105_RS11115 PF02233 NAD(P) transhydrogenase beta subunit YE105_RS11120 PF00582 Universal stress protein family YE105_RS11125 PF00027 Cyclic nucleotide-binding domain YE105_RS11125 PF13545 Crp-like helix-turn-helix domain YE105_RS11130 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain YE105_RS11130 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain YE105_RS11145 PF06445 GyrI-like small molecule binding domain YE105_RS11155 PF00245 Alkaline phosphatase YE105_RS11160 PF00294 pfkB family carbohydrate kinase YE105_RS11165 PF07690 Major Facilitator Superfamily YE105_RS11180 PF13419 Haloacid dehalogenase-like hydrolase YE105_RS11185 PF01842 ACT domain YE105_RS11190 PF00205 Thiamine pyrophosphate enzyme, central domain YE105_RS11190 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YE105_RS11190 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YE105_RS11200 PF01510 N-acetylmuramoyl-L-alanine amidase YE105_RS11220 PF07690 Major Facilitator Superfamily YE105_RS11225 PF00459 Inositol monophosphatase family YE105_RS11230 PF00356 Bacterial regulatory proteins, lacI family YE105_RS11235 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus YE105_RS11235 PF01048 Phosphorylase superfamily YE105_RS11240 PF01526 Tn3 transposase DDE domain YE105_RS11240 PF13700 Domain of unknown function (DUF4158) YE105_RS11245 PF02796 Helix-turn-helix domain of resolvase YE105_RS11245 PF00239 Resolvase, N terminal domain YE105_RS11250 PF13784 Fic/DOC family N-terminal YE105_RS11250 PF02661 Fic/DOC family YE105_RS11260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YE105_RS11260 PF03466 LysR substrate binding domain YE105_RS11275 PF00497 Bacterial extracellular solute-binding proteins, family 3 YE105_RS11280 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS11285 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS11290 PF01037 Lrp/AsnC ligand binding domain YE105_RS11320 PF02798 Glutathione S-transferase, N-terminal domain YE105_RS11480 PF07338 Protein of unknown function (DUF1471) YE105_RS11490 PF00106 short chain dehydrogenase YE105_RS11495 PF02694 Uncharacterised BCR, YnfA/UPF0060 family YE105_RS11505 PF06932 Protein of unknown function (DUF1283) YE105_RS11510 PF06649 Protein of unknown function (DUF1161) YE105_RS11520 PF00654 Voltage gated chloride channel YE105_RS11530 PF00480 ROK family YE105_RS11535 PF03466 LysR substrate binding domain YE105_RS11535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YE105_RS11540 PF07690 Major Facilitator Superfamily YE105_RS11555 PF05472 DNA replication terminus site-binding protein (Ter protein) YE105_RS11565 PF00206 Lyase YE105_RS11565 PF10415 Fumarase C C-terminus YE105_RS11570 PF01238 Phosphomannose isomerase type I YE105_RS11575 PF06097 Bacterial protein of unknown function (DUF945) YE105_RS11580 PF00132 Bacterial transferase hexapeptide (six repeats) YE105_RS11585 PF00356 Bacterial regulatory proteins, lacI family YE105_RS11585 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family YE105_RS11590 PF00367 phosphotransferase system, EIIB YE105_RS11590 PF02378 Phosphotransferase system, EIIC YE105_RS11595 PF00155 Aminotransferase class I and II YE105_RS11600 PF00962 Adenosine/AMP deaminase YE105_RS11605 PF13593 SBF-like CPA transporter family (DUF4137) YE105_RS11610 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YE105_RS11610 PF02894 Oxidoreductase family, C-terminal alpha/beta domain YE105_RS11615 PF02311 AraC-like ligand binding domain YE105_RS11615 PF12833 Helix-turn-helix domain YE105_RS11620 PF02653 Branched-chain amino acid transport system / permease component YE105_RS11625 PF00005 ABC transporter YE105_RS11630 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family YE105_RS11635 PF02782 FGGY family of carbohydrate kinases, C-terminal domain YE105_RS11640 PF02610 L-arabinose isomerase YE105_RS11640 PF11762 L-arabinose isomerase C-terminal domain YE105_RS11645 PF02463 RecF/RecN/SMC N terminal domain YE105_RS11650 PF00005 ABC transporter YE105_RS11650 PF03412 Peptidase C39 family YE105_RS11650 PF00664 ABC transporter transmembrane region YE105_RS11665 PF01268 Formate--tetrahydrofolate ligase YE105_RS11670 PF10754 Protein of unknown function (DUF2569) YE105_RS11675 PF02508 Rnf-Nqr subunit, membrane protein YE105_RS11680 PF04060 Putative Fe-S cluster YE105_RS11685 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit YE105_RS11685 PF13237 4Fe-4S dicluster domain YE105_RS11685 PF13375 RnfC Barrel sandwich hybrid domain YE105_RS11685 PF10531 SLBB domain YE105_RS11695 PF06445 GyrI-like small molecule binding domain YE105_RS11695 PF12833 Helix-turn-helix domain YE105_RS11700 PF03116 NQR2, RnfD, RnfE family YE105_RS11705 PF04205 FMN-binding domain YE105_RS11710 PF02508 Rnf-Nqr subunit, membrane protein YE105_RS11715 PF00730 HhH-GPD superfamily base excision DNA repair protein YE105_RS11715 PF10576 Iron-sulfur binding domain of endonuclease III YE105_RS11715 PF00633 Helix-hairpin-helix motif YE105_RS11740 PF00384 Molybdopterin oxidoreductase YE105_RS11745 PF08206 Ribonuclease B OB domain YE105_RS11745 PF00773 RNB domain YE105_RS11745 PF00575 S1 RNA binding domain YE105_RS11750 PF02554 Carbon starvation protein CstA YE105_RS11750 PF13722 5TM C-terminal transporter carbon starvation CstA YE105_RS11755 PF04328 Selenoprotein, putative YE105_RS11760 PF00923 Transaldolase/Fructose-6-phosphate aldolase YE105_RS11765 PF00455 DeoR C terminal sensor domain YE105_RS11765 PF08220 DeoR-like helix-turn-helix domain YE105_RS11775 PF00596 Class II Aldolase and Adducin N-terminal domain YE105_RS11780 PF05433 Glycine zipper 2TM domain YE105_RS11790 PF01253 Translation initiation factor SUI1 YE105_RS11795 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family YE105_RS11800 PF07338 Protein of unknown function (DUF1471) YE105_RS11805 PF03594 Benzoate membrane transport protein YE105_RS11810 PF01381 Helix-turn-helix YE105_RS11810 PF07883 Cupin domain YE105_RS11820 PF18073 Rubredoxin metal binding domain YE105_RS11825 PF06305 Lipopolysaccharide assembly protein A domain YE105_RS11830 PF01569 PAP2 superfamily YE105_RS11835 PF00925 GTP cyclohydrolase II YE105_RS11845 PF00330 Aconitase family (aconitate hydratase) YE105_RS11845 PF00694 Aconitase C-terminal domain YE105_RS11855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YE105_RS11855 PF03466 LysR substrate binding domain YE105_RS11860 PF01396 Topoisomerase DNA binding C4 zinc finger YE105_RS11860 PF01131 DNA topoisomerase YE105_RS11860 PF08272 Topoisomerase I zinc-ribbon-like YE105_RS11860 PF01751 Toprim domain YE105_RS11865 PF10692 Protein of unknown function (DUF2498) YE105_RS11870 PF01343 Peptidase family S49 YE105_RS11870 PF08496 Peptidase family S49 N-terminal YE105_RS11875 PF00106 short chain dehydrogenase YE105_RS11880 PF12557 Cob(I)alamin adenosyltransferase N terminal YE105_RS11880 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP YE105_RS11890 PF01479 S4 domain YE105_RS11890 PF00849 RNA pseudouridylate synthase YE105_RS11895 PF01300 Telomere recombination YE105_RS11900 PF02811 PHP domain YE105_RS11905 PF04715 Anthranilate synthase component I, N terminal region YE105_RS11905 PF00425 chorismate binding enzyme YE105_RS11910 PF00117 Glutamine amidotransferase class-I YE105_RS11915 PF00591 Glycosyl transferase family, a/b domain YE105_RS11915 PF02885 Glycosyl transferase family, helical bundle domain YE105_RS11920 PF00218 Indole-3-glycerol phosphate synthase YE105_RS11920 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase YE105_RS11925 PF00291 Pyridoxal-phosphate dependent enzyme YE105_RS11930 PF00290 Tryptophan synthase alpha chain YE105_RS11940 PF03922 OmpW family YE105_RS11945 PF03692 Putative zinc- or iron-chelating domain YE105_RS11960 PF04279 Intracellular septation protein A YE105_RS11965 PF03061 Thioesterase superfamily YE105_RS11970 PF03544 Gram-negative bacterial TonB protein C-terminal YE105_RS11975 PF03795 YCII-related domain YE105_RS11990 PF13091 PLD-like domain YE105_RS11990 PF13396 Phospholipase_D-nuclease N-terminal YE105_RS11995 PF04269 Protein of unknown function, DUF440 YE105_RS12000 PF00005 ABC transporter YE105_RS12000 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YE105_RS12005 PF00005 ABC transporter YE105_RS12005 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YE105_RS12010 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS12010 PF12911 N-terminal TM domain of oligopeptide transport permease C YE105_RS12015 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS12020 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YE105_RS12025 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YE105_RS12030 PF01914 MarC family integral membrane protein YE105_RS12035 PF00465 Iron-containing alcohol dehydrogenase YE105_RS12035 PF00171 Aldehyde dehydrogenase family YE105_RS12040 PF00265 Thymidine kinase YE105_RS12050 PF00816 H-NS histone family YE105_RS12055 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain YE105_RS12055 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain YE105_RS12055 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain YE105_RS12060 PF00072 Response regulator receiver domain YE105_RS12065 PF01734 Patatin-like phospholipase YE105_RS12075 PF02810 SEC-C motif YE105_RS12080 PF01842 ACT domain YE105_RS12080 PF00551 Formyl transferase YE105_RS12095 PF03466 LysR substrate binding domain YE105_RS12095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YE105_RS12100 PF03372 Endonuclease/Exonuclease/phosphatase family YE105_RS12105 PF00293 NUDIX domain YE105_RS12110 PF07383 Protein of unknown function (DUF1496) YE105_RS12115 PF01131 DNA topoisomerase YE105_RS12115 PF01751 Toprim domain YE105_RS12120 PF02769 AIR synthase related protein, C-terminal domain YE105_RS12120 PF00586 AIR synthase related protein, N-terminal domain YE105_RS12125 PF00881 Nitroreductase family YE105_RS12130 PF01343 Peptidase family S49 YE105_RS12135 PF00710 Asparaginase, N-terminal YE105_RS12135 PF17763 Glutaminase/Asparaginase C-terminal domain YE105_RS12140 PF00857 Isochorismatase family YE105_RS12150 PF07023 Protein of unknown function (DUF1315) YE105_RS12155 PF01641 SelR domain YE105_RS12160 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain YE105_RS12160 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain YE105_RS12165 PF01263 Aldose 1-epimerase YE105_RS12170 PF06629 MltA-interacting protein MipA YE105_RS12175 PF08298 PrkA AAA domain YE105_RS12175 PF06798 PrkA serine protein kinase C-terminal domain YE105_RS12180 PF04285 Protein of unknown function (DUF444) YE105_RS12195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YE105_RS12195 PF03466 LysR substrate binding domain YE105_RS12200 PF02678 Pirin YE105_RS12200 PF05726 Pirin C-terminal cupin domain YE105_RS12205 PF00563 EAL domain YE105_RS12205 PF13426 PAS domain YE105_RS12205 PF00990 Diguanylate cyclase, GGDEF domain YE105_RS12210 PF07690 Major Facilitator Superfamily YE105_RS12215 PF00842 Alanine racemase, C-terminal domain YE105_RS12215 PF01168 Alanine racemase, N-terminal domain YE105_RS12220 PF01266 FAD dependent oxidoreductase YE105_RS12225 PF04293 SpoVR like protein YE105_RS12230 PF07840 FadR C-terminal domain YE105_RS12230 PF00392 Bacterial regulatory proteins, gntR family YE105_RS12235 PF06450 Bacterial Na+/H+ antiporter B (NhaB) YE105_RS12240 PF02600 Disulfide bond formation protein DsbB YE105_RS12260 PF03932 CutC family YE105_RS12265 PF06185 YecM protein YE105_RS12270 PF00750 tRNA synthetases class I (R) YE105_RS12270 PF03485 Arginyl tRNA synthetase N terminal domain YE105_RS12270 PF05746 DALR anticodon binding domain YE105_RS12280 PF02562 PhoH-like protein YE105_RS12295 PF13994 PgaD-like protein YE105_RS12300 PF00535 Glycosyl transferase family 2 YE105_RS12305 PF01522 Polysaccharide deacetylase YE105_RS12305 PF14883 Hypothetical glycosyl hydrolase family 13 YE105_RS12315 PF00557 Metallopeptidase family M24 YE105_RS12320 PF11575 FhuF 2Fe-2S C-terminal domain YE105_RS12320 PF06276 Ferric iron reductase FhuF-like transporter YE105_RS12325 PF01411 tRNA synthetases class II (A) YE105_RS12325 PF02272 DHHA1 domain YE105_RS12325 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain YE105_RS12330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YE105_RS12330 PF03466 LysR substrate binding domain YE105_RS12335 PF03848 Tellurite resistance protein TehB YE105_RS12335 PF09313 Domain of unknown function (DUF1971) YE105_RS12345 PF00578 AhpC/TSA family YE105_RS12350 PF00005 ABC transporter YE105_RS12350 PF02687 FtsX-like permease family YE105_RS12350 PF12704 MacB-like periplasmic core domain YE105_RS12360 PF12704 MacB-like periplasmic core domain YE105_RS12360 PF00005 ABC transporter YE105_RS12360 PF02687 FtsX-like permease family YE105_RS12370 PF10634 Fe2+ transport protein YE105_RS12375 PF03239 Iron permease FTR1 family YE105_RS12390 PF04960 Glutaminase YE105_RS12395 PF01261 Xylose isomerase-like TIM barrel YE105_RS12400 PF00596 Class II Aldolase and Adducin N-terminal domain YE105_RS12405 PF07005 Sugar-binding N-terminal domain YE105_RS12405 PF17042 Nucleotide-binding C-terminal domain YE105_RS12410 PF08220 DeoR-like helix-turn-helix domain YE105_RS12410 PF00455 DeoR C terminal sensor domain YE105_RS12415 PF17203 Single cache domain 3 YE105_RS12415 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain YE105_RS12415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YE105_RS12415 PF00989 PAS fold YE105_RS12420 PF00072 Response regulator receiver domain YE105_RS12425 PF03390 2-hydroxycarboxylate transporter family YE105_RS12430 PF00324 Amino acid permease YE105_RS12445 PF07690 Major Facilitator Superfamily YE105_RS12460 PF00872 Transposase, Mutator family YE105_RS12470 PF08242 Methyltransferase domain YE105_RS12475 PF00872 Transposase, Mutator family YE105_RS12520 PF02899 Phage integrase, N-terminal SAM-like domain YE105_RS12520 PF00589 Phage integrase family YE105_RS12525 PF10709 Protein of unknown function (DUF2511) YE105_RS12530 PF05425 Copper resistance protein D YE105_RS12535 PF04234 CopC domain YE105_RS12540 PF00210 Ferritin-like domain YE105_RS12545 PF06440 DNA polymerase III, theta subunit YE105_RS12555 PF00929 Exonuclease YE105_RS12560 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain YE105_RS12560 PF00326 Prolyl oligopeptidase family YE105_RS12565 PF13995 YebF-like protein YE105_RS12570 PF04266 ASCH domain YE105_RS12575 PF07130 YebG protein YE105_RS12580 PF00270 DEAD/DEAH box helicase YE105_RS12580 PF00271 Helicase conserved C-terminal domain YE105_RS12580 PF03880 DbpA RNA binding domain YE105_RS12585 PF02222 ATP-grasp domain YE105_RS12590 PF03701 Uncharacterised protein family (UPF0181) YE105_RS12595 PF04715 Anthranilate synthase component I, N terminal region YE105_RS12595 PF00425 chorismate binding enzyme YE105_RS12600 PF00293 NUDIX domain YE105_RS12605 PF03315 Serine dehydratase beta chain YE105_RS12605 PF03313 Serine dehydratase alpha chain YE105_RS12610 PF03471 Transporter associated domain YE105_RS12610 PF03741 Integral membrane protein TerC family YE105_RS12615 PF03610 PTS system fructose IIA component YE105_RS12615 PF03830 PTS system sorbose subfamily IIB component YE105_RS12620 PF03609 PTS system sorbose-specific iic component YE105_RS12625 PF03613 PTS system mannose/fructose/sorbose family IID component YE105_RS12630 PF06173 Protein of unknown function (DUF986) YE105_RS12635 PF02659 Putative manganese efflux pump YE105_RS12640 PF00593 TonB dependent receptor YE105_RS12640 PF07715 TonB-dependent Receptor Plug Domain YE105_RS12645 PF08448 PAS fold YE105_RS12645 PF00563 EAL domain YE105_RS12645 PF05231 MASE1 YE105_RS12645 PF00990 Diguanylate cyclase, GGDEF domain YE105_RS12645 PF13426 PAS domain YE105_RS12645 PF08447 PAS fold YE105_RS12655 PF13847 Methyltransferase domain YE105_RS12660 PF03717 Penicillin-binding Protein dimerisation domain YE105_RS12660 PF00905 Penicillin binding protein transpeptidase domain YE105_RS12665 PF02578 Multi-copper polyphenol oxidoreductase laccase YE105_RS12670 PF00313 'Cold-shock' DNA-binding domain YE105_RS12675 PF10736 Protein of unknown function (DUF2627) YE105_RS12680 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP YE105_RS12685 PF00324 Amino acid permease YE105_RS12700 PF13974 YebO-like protein YE105_RS12705 PF13996 YobH-like protein YE105_RS12710 PF10964 Protein of unknown function (DUF2766) YE105_RS12720 PF12833 Helix-turn-helix domain YE105_RS12730 PF13520 Amino acid permease YE105_RS12740 PF00005 ABC transporter YE105_RS12740 PF00664 ABC transporter transmembrane region YE105_RS12750 PF03372 Endonuclease/Exonuclease/phosphatase family YE105_RS12760 PF00360 Phytochrome region YE105_RS12760 PF01590 GAF domain YE105_RS12760 PF00563 EAL domain YE105_RS12760 PF00990 Diguanylate cyclase, GGDEF domain YE105_RS12770 PF06411 HdeA/HdeB family YE105_RS12775 PF07007 Lysozyme inhibitor LprI YE105_RS12785 PF00892 EamA-like transporter family YE105_RS12800 PF01638 HxlR-like helix-turn-helix YE105_RS12805 PF05368 NmrA-like family YE105_RS12810 PF01053 Cys/Met metabolism PLP-dependent enzyme YE105_RS12820 PF00717 Peptidase S24-like YE105_RS12825 PF11799 impB/mucB/samB family C-terminal domain YE105_RS12825 PF13438 Domain of unknown function (DUF4113) YE105_RS12825 PF00817 impB/mucB/samB family YE105_RS12830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YE105_RS12830 PF08447 PAS fold YE105_RS12840 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family YE105_RS12840 PF00356 Bacterial regulatory proteins, lacI family YE105_RS12845 PF08244 Glycosyl hydrolases family 32 C terminal YE105_RS12845 PF00251 Glycosyl hydrolases family 32 N-terminal domain YE105_RS12850 PF01306 LacY proton/sugar symporter YE105_RS12865 PF00180 Isocitrate/isopropylmalate dehydrogenase YE105_RS12900 PF00180 Isocitrate/isopropylmalate dehydrogenase YE105_RS12905 PF00849 RNA pseudouridylate synthase YE105_RS12910 PF00293 NUDIX domain YE105_RS12920 PF04356 Protein of unknown function (DUF489) YE105_RS12925 PF08328 Adenylosuccinate lyase C-terminal YE105_RS12925 PF00206 Lyase YE105_RS12935 PF00072 Response regulator receiver domain YE105_RS12935 PF00486 Transcriptional regulatory protein, C terminal YE105_RS12940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YE105_RS12940 PF08918 PhoQ Sensor YE105_RS12945 PF08007 Cupin superfamily protein YE105_RS12950 PF07687 Peptidase dimerisation domain YE105_RS12950 PF01546 Peptidase family M20/M25/M40 YE105_RS12955 PF02146 Sir2 family YE105_RS12960 PF00480 ROK family YE105_RS12965 PF12704 MacB-like periplasmic core domain YE105_RS12965 PF02687 FtsX-like permease family YE105_RS12970 PF00005 ABC transporter YE105_RS12975 PF12704 MacB-like periplasmic core domain YE105_RS12975 PF02687 FtsX-like permease family YE105_RS12980 PF02559 CarD-like/TRCF domain YE105_RS12980 PF00270 DEAD/DEAH box helicase YE105_RS12980 PF00271 Helicase conserved C-terminal domain YE105_RS12980 PF03461 TRCF domain YE105_RS12980 PF17757 UvrB interaction domain YE105_RS12985 PF05433 Glycine zipper 2TM domain YE105_RS12990 PF07992 Pyridine nucleotide-disulphide oxidoreductase YE105_RS12995 PF05728 Uncharacterised protein family (UPF0227) YE105_RS13000 PF00933 Glycosyl hydrolase family 3 N terminal domain YE105_RS13005 PF01636 Phosphotransferase enzyme family YE105_RS13010 PF08139 Prokaryotic membrane lipoprotein lipid attachment site YE105_RS13010 PF13036 Peptidoglycan-synthase activator LpoB YE105_RS13015 PF07233 Protein of unknown function (DUF1425) YE105_RS13020 PF01230 HIT domain YE105_RS13025 PF08501 Shikimate dehydrogenase substrate binding domain YE105_RS13030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YE105_RS13030 PF12793 Sugar transport-related sRNA regulator N-term YE105_RS13035 PF13186 Iron-sulfur cluster-binding domain YE105_RS13035 PF04055 Radical SAM superfamily YE105_RS13045 PF03412 Peptidase C39 family YE105_RS13045 PF00005 ABC transporter YE105_RS13045 PF00664 ABC transporter transmembrane region YE105_RS13055 PF00367 phosphotransferase system, EIIB YE105_RS13055 PF02378 Phosphotransferase system, EIIC YE105_RS13060 PF01026 TatD related DNase YE105_RS13065 PF09115 DNA polymerase III, delta subunit, C terminal YE105_RS13070 PF02223 Thymidylate kinase YE105_RS13075 PF02618 YceG-like family YE105_RS13080 PF01063 Amino-transferase class IV YE105_RS13085 PF00109 Beta-ketoacyl synthase, N-terminal domain YE105_RS13085 PF02801 Beta-ketoacyl synthase, C-terminal domain YE105_RS13090 PF00550 Phosphopantetheine attachment site YE105_RS13100 PF00698 Acyl transferase domain YE105_RS13105 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YE105_RS13105 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal YE105_RS13110 PF02504 Fatty acid synthesis protein YE105_RS13115 PF01783 Ribosomal L32p protein family YE105_RS13120 PF02620 Large ribosomal RNA subunit accumulation protein YceD YE105_RS13125 PF02545 Maf-like protein YE105_RS13130 PF00849 RNA pseudouridylate synthase YE105_RS13130 PF01479 S4 domain YE105_RS13135 PF00575 S1 RNA binding domain YE105_RS13135 PF12111 Polyribonucleotide phosphorylase C terminal YE105_RS13135 PF10150 Ribonuclease E/G family YE105_RS13140 PF03992 Antibiotic biosynthesis monooxygenase YE105_RS13145 PF01979 Amidohydrolase family YE105_RS13150 PF06183 DinI-like family YE105_RS13155 PF13991 BssS protein family YE105_RS13160 PF01266 FAD dependent oxidoreductase YE105_RS13165 PF00196 Bacterial regulatory proteins, luxR family YE105_RS13170 PF01594 AI-2E family transporter YE105_RS13175 PF17773 UPF0176 acylphosphatase like domain YE105_RS13175 PF00581 Rhodanese-like domain YE105_RS13175 PF12368 Rhodanase C-terminal YE105_RS13185 PF00384 Molybdopterin oxidoreductase YE105_RS13185 PF04879 Molybdopterin oxidoreductase Fe4S4 domain YE105_RS13185 PF01568 Molydopterin dinucleotide binding domain YE105_RS13190 PF03916 Polysulphide reductase, NrfD YE105_RS13195 PF13247 4Fe-4S dicluster domain YE105_RS13200 PF00512 His Kinase A (phospho-acceptor) domain YE105_RS13200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YE105_RS13205 PF00196 Bacterial regulatory proteins, luxR family YE105_RS13205 PF00072 Response regulator receiver domain YE105_RS13210 PF03279 Bacterial lipid A biosynthesis acyltransferase YE105_RS13215 PF05785 Rho-activating domain of cytotoxic necrotizing factor YE105_RS13215 PF18807 Tripartite Tc toxins repeat YE105_RS13220 PF07681 DoxX YE105_RS13230 PF00854 POT family YE105_RS13250 PF07119 Protein of unknown function (DUF1375) YE105_RS13255 PF00535 Glycosyl transferase family 2 YE105_RS13260 PF04349 Periplasmic glucan biosynthesis protein, MdoG YE105_RS13265 PF01757 Acyltransferase family YE105_RS13285 PF03471 Transporter associated domain YE105_RS13285 PF00999 Sodium/hydrogen exchanger family YE105_RS13285 PF02080 TrkA-C domain YE105_RS13295 PF00765 Autoinducer synthase YE105_RS13300 PF00196 Bacterial regulatory proteins, luxR family YE105_RS13300 PF03472 Autoinducer binding domain YE105_RS13310 PF03918 Cytochrome C biogenesis protein YE105_RS13315 PF08534 Redoxin YE105_RS13320 PF01578 Cytochrome C assembly protein YE105_RS13320 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal YE105_RS13325 PF03916 Polysulphide reductase, NrfD YE105_RS13330 PF00037 4Fe-4S binding domain YE105_RS13330 PF13247 4Fe-4S dicluster domain YE105_RS13335 PF13435 Cytochrome c554 and c-prime YE105_RS13335 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) YE105_RS13340 PF02335 Cytochrome c552 YE105_RS13350 PF04358 DsrC like protein YE105_RS13355 PF00708 Acylphosphatase YE105_RS13370 PF17785 PUA-like domain YE105_RS13370 PF10672 S-adenosylmethionine-dependent methyltransferase YE105_RS13375 PF08755 Hemimethylated DNA-binding protein YccV like YE105_RS13380 PF13380 CoA binding domain YE105_RS13385 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) YE105_RS13390 PF02142 MGS-like domain YE105_RS13395 PF12462 DNA helicase IV / RNA helicase N terminal YE105_RS13395 PF00580 UvrD/REP helicase N-terminal domain YE105_RS13395 PF13361 UvrD-like helicase C-terminal domain YE105_RS13400 PF03733 Inner membrane component domain YE105_RS13410 PF04993 TfoX N-terminal domain YE105_RS13410 PF04994 TfoX C-terminal domain YE105_RS13415 PF03846 Cell division inhibitor SulA YE105_RS13420 PF01389 OmpA-like transmembrane domain YE105_RS13420 PF00691 OmpA family YE105_RS13425 PF17414 MatP C-terminal ribbon-helix-helix domain YE105_RS13425 PF06303 MatP N-terminal domain YE105_RS13430 PF05362 Lon protease (S16) C-terminal proteolytic domain YE105_RS13430 PF13654 AAA domain YE105_RS13435 PF07977 FabA-like domain YE105_RS13450 PF02801 Beta-ketoacyl synthase, C-terminal domain YE105_RS13450 PF00109 Beta-ketoacyl synthase, N-terminal domain YE105_RS13455 PF03886 ABC-type transport auxiliary lipoprotein component YE105_RS13460 PF02470 MlaD protein YE105_RS13465 PF04403 Paraquat-inducible protein A YE105_RS13470 PF12848 ABC transporter YE105_RS13470 PF16326 ABC transporter C-terminal domain YE105_RS13470 PF00005 ABC transporter YE105_RS13475 PF02926 THUMP domain YE105_RS13475 PF01170 Putative RNA methylase family UPF0020 YE105_RS13475 PF10672 S-adenosylmethionine-dependent methyltransferase YE105_RS13480 PF00111 2Fe-2S iron-sulfur cluster binding domain YE105_RS13480 PF03473 MOSC domain YE105_RS13480 PF03476 MOSC N-terminal beta barrel domain YE105_RS13485 PF07126 Cell-division protein ZapC YE105_RS13490 PF01180 Dihydroorotate dehydrogenase YE105_RS13495 PF17432 Domain of unknown function (DUF3458_C) ARM repeats YE105_RS13495 PF01433 Peptidase family M1 domain YE105_RS13495 PF11940 Domain of unknown function (DUF3458) Ig-like fold YE105_RS13500 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain YE105_RS13500 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family YE105_RS13505 PF00152 tRNA synthetases class II (D, K and N) YE105_RS13505 PF01336 OB-fold nucleic acid binding domain YE105_RS13510 PF00267 Gram-negative porin YE105_RS13515 PF00155 Aminotransferase class I and II YE105_RS13525 PF00563 EAL domain YE105_RS13525 PF12792 CSS motif domain associated with EAL YE105_RS13530 PF00753 Metallo-beta-lactamase superfamily YE105_RS13535 PF05951 Bacterial protein of unknown function (DUF882) YE105_RS13540 PF03734 L,D-transpeptidase catalytic domain YE105_RS13540 PF01471 Putative peptidoglycan binding domain YE105_RS13545 PF16330 MukB hinge domain YE105_RS13545 PF04310 MukB N-terminal YE105_RS13550 PF04288 MukE-like family YE105_RS13555 PF17193 MukF C-terminal domain YE105_RS13555 PF17192 MukF middle domain YE105_RS13555 PF03882 MukF winged-helix domain YE105_RS13560 PF13847 Methyltransferase domain YE105_RS13565 PF02698 DUF218 domain YE105_RS13570 PF01636 Phosphotransferase enzyme family YE105_RS13575 PF02348 Cytidylyltransferase YE105_RS13580 PF03966 Trm112p-like protein YE105_RS13585 PF00313 'Cold-shock' DNA-binding domain YE105_RS13590 PF00313 'Cold-shock' DNA-binding domain YE105_RS13595 PF07063 Domain of unknown function (DUF1338) YE105_RS13600 PF02606 Tetraacyldisaccharide-1-P 4'-kinase YE105_RS13605 PF00664 ABC transporter transmembrane region YE105_RS13605 PF00005 ABC transporter YE105_RS13610 PF03772 Competence protein YE105_RS13610 PF00753 Metallo-beta-lactamase superfamily YE105_RS13615 PF00216 Bacterial DNA-binding protein YE105_RS13620 PF00575 S1 RNA binding domain YE105_RS13625 PF02224 Cytidylate kinase YE105_RS13630 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) YE105_RS13635 PF00266 Aminotransferase class-V YE105_RS13640 PF04239 Protein of unknown function (DUF421) YE105_RS13645 PF00710 Asparaginase, N-terminal YE105_RS13645 PF17763 Glutaminase/Asparaginase C-terminal domain YE105_RS13650 PF18381 YcaO cyclodehydratase C-terminal domain YE105_RS13650 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding YE105_RS13655 PF01226 Formate/nitrite transporter YE105_RS13660 PF01228 Glycine radical YE105_RS13660 PF02901 Pyruvate formate lyase-like YE105_RS13665 PF04055 Radical SAM superfamily YE105_RS13670 PF07690 Major Facilitator Superfamily YE105_RS13680 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) YE105_RS13680 PF02403 Seryl-tRNA synthetase N-terminal domain YE105_RS13685 PF00004 ATPase family associated with various cellular activities (AAA) YE105_RS13685 PF16193 AAA C-terminal domain YE105_RS13685 PF12002 MgsA AAA+ ATPase C terminal YE105_RS13690 PF03548 Outer membrane lipoprotein carrier protein LolA YE105_RS13695 PF17854 FtsK alpha domain YE105_RS13695 PF09397 Ftsk gamma domain YE105_RS13695 PF13491 4TM region of DNA translocase FtsK/SpoIIIE YE105_RS13695 PF01580 FtsK/SpoIIIE family YE105_RS13700 PF01037 Lrp/AsnC ligand binding domain YE105_RS13705 PF07992 Pyridine nucleotide-disulphide oxidoreductase YE105_RS13710 PF00005 ABC transporter YE105_RS13710 PF00664 ABC transporter transmembrane region YE105_RS13715 PF00664 ABC transporter transmembrane region YE105_RS13715 PF00005 ABC transporter YE105_RS13720 PF03588 Leucyl/phenylalanyl-tRNA protein transferase YE105_RS13725 PF01176 Translation initiation factor 1A / IF-1 YE105_RS13730 PF07724 AAA domain (Cdc48 subfamily) YE105_RS13730 PF02861 Clp amino terminal domain, pathogenicity island component YE105_RS13730 PF10431 C-terminal, D2-small domain, of ClpB protein YE105_RS13730 PF00004 ATPase family associated with various cellular activities (AAA) YE105_RS13730 PF17871 AAA lid domain YE105_RS13735 PF02617 ATP-dependent Clp protease adaptor protein ClpS YE105_RS13740 PF00313 'Cold-shock' DNA-binding domain YE105_RS13745 PF12704 MacB-like periplasmic core domain YE105_RS13745 PF02687 FtsX-like permease family YE105_RS13745 PF00005 ABC transporter YE105_RS13750 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YE105_RS13755 PF04393 Protein of unknown function (DUF535) YE105_RS13760 PF11398 Protein of unknown function (DUF2813) YE105_RS13765 PF03956 Lysine exporter LysO YE105_RS13770 PF03063 Prismane/CO dehydrogenase family YE105_RS13775 PF00970 Oxidoreductase FAD-binding domain YE105_RS13775 PF00111 2Fe-2S iron-sulfur cluster binding domain YE105_RS13775 PF00175 Oxidoreductase NAD-binding domain YE105_RS13780 PF00205 Thiamine pyrophosphate enzyme, central domain YE105_RS13780 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YE105_RS13780 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YE105_RS13785 PF04072 Leucine carboxyl methyltransferase YE105_RS13790 PF01212 Beta-eliminating lyase YE105_RS13795 PF11066 Protein of unknown function (DUF2867) YE105_RS13795 PF13460 NAD(P)H-binding YE105_RS13800 PF01370 NAD dependent epimerase/dehydratase family YE105_RS13805 PF12883 Protein of unknown function (DUF3828) YE105_RS13810 PF00005 ABC transporter YE105_RS13815 PF00497 Bacterial extracellular solute-binding proteins, family 3 YE105_RS13820 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS13825 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS13830 PF00497 Bacterial extracellular solute-binding proteins, family 3 YE105_RS13835 PF05958 tRNA (Uracil-5-)-methyltransferase YE105_RS13840 PF10767 Protein of unknown function (DUF2593) YE105_RS13845 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS13850 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS13855 PF00005 ABC transporter YE105_RS13855 PF08402 TOBE domain YE105_RS13860 PF13416 Bacterial extracellular solute-binding protein YE105_RS13865 PF10722 Putative bacterial sensory transduction regulator YE105_RS13870 PF07214 Protein of unknown function (DUF1418) YE105_RS13875 PF00462 Glutaredoxin YE105_RS13880 PF06826 Predicted Permease Membrane Region YE105_RS13880 PF02080 TrkA-C domain YE105_RS13890 PF01569 PAP2 superfamily YE105_RS13895 PF01791 DeoC/LacD family aldolase YE105_RS13900 PF08220 DeoR-like helix-turn-helix domain YE105_RS13900 PF00455 DeoR C terminal sensor domain YE105_RS13910 PF03313 Serine dehydratase alpha chain YE105_RS13910 PF03315 Serine dehydratase beta chain YE105_RS13920 PF00768 D-alanyl-D-alanine carboxypeptidase YE105_RS13920 PF07943 Penicillin-binding protein 5, C-terminal domain YE105_RS13925 PF00291 Pyridoxal-phosphate dependent enzyme YE105_RS13925 PF00571 CBS domain YE105_RS13930 PF01053 Cys/Met metabolism PLP-dependent enzyme YE105_RS13935 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS13940 PF00005 ABC transporter YE105_RS13940 PF09383 NIL domain YE105_RS13945 PF03180 NLPA lipoprotein YE105_RS13960 PF13417 Glutathione S-transferase, N-terminal domain YE105_RS13960 PF00043 Glutathione S-transferase, C-terminal domain YE105_RS13965 PF00593 TonB dependent receptor YE105_RS13965 PF07715 TonB-dependent Receptor Plug Domain YE105_RS13970 PF00005 ABC transporter YE105_RS13975 PF01032 FecCD transport family YE105_RS13980 PF00324 Amino acid permease YE105_RS13985 PF03466 LysR substrate binding domain YE105_RS13985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YE105_RS13995 PF03601 Conserved hypothetical protein 698 YE105_RS14000 PF01261 Xylose isomerase-like TIM barrel YE105_RS14005 PF13953 PapC C-terminal domain YE105_RS14005 PF00577 Outer membrane usher protein YE105_RS14005 PF13954 PapC N-terminal domain YE105_RS14010 PF02753 Pili assembly chaperone PapD, C-terminal domain YE105_RS14010 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain YE105_RS14020 PF17550 Family of unknown function YE105_RS14025 PF00486 Transcriptional regulatory protein, C terminal YE105_RS14030 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit YE105_RS14030 PF02378 Phosphotransferase system, EIIC YE105_RS14035 PF00294 pfkB family carbohydrate kinase YE105_RS14040 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YE105_RS14040 PF00381 PTS HPr component phosphorylation site YE105_RS14045 PF13344 Haloacid dehalogenase-like hydrolase YE105_RS14045 PF00293 NUDIX domain YE105_RS14050 PF03264 NapC/NirT cytochrome c family, N-terminal region YE105_RS14055 PF18364 Molybdopterin oxidoreductase N-terminal domain YE105_RS14055 PF01568 Molydopterin dinucleotide binding domain YE105_RS14055 PF00384 Molybdopterin oxidoreductase YE105_RS14060 PF03692 Putative zinc- or iron-chelating domain YE105_RS14065 PF03222 Tryptophan/tyrosine permease family YE105_RS14070 PF01132 Elongation factor P (EF-P) OB domain YE105_RS14070 PF09285 Elongation factor P, C-terminal YE105_RS14070 PF08207 Elongation factor P (EF-P) KOW-like domain YE105_RS14075 PF03786 D-mannonate dehydratase (UxuA) YE105_RS14085 PF01232 Mannitol dehydrogenase Rossmann domain YE105_RS14085 PF08125 Mannitol dehydrogenase C-terminal domain YE105_RS14090 PF07729 FCD domain YE105_RS14090 PF00392 Bacterial regulatory proteins, gntR family YE105_RS14100 PF02492 CobW/HypB/UreG, nucleotide-binding domain YE105_RS14100 PF07683 Cobalamin synthesis protein cobW C-terminal domain YE105_RS14105 PF01569 PAP2 superfamily YE105_RS14110 PF00877 NlpC/P60 family YE105_RS14120 PF12792 CSS motif domain associated with EAL YE105_RS14120 PF00563 EAL domain YE105_RS14125 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YE105_RS14130 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS14135 PF12911 N-terminal TM domain of oligopeptide transport permease C YE105_RS14135 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS14140 PF00005 ABC transporter YE105_RS14140 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YE105_RS14145 PF13989 YejG-like protein YE105_RS14150 PF07690 Major Facilitator Superfamily YE105_RS14155 PF00849 RNA pseudouridylate synthase YE105_RS14155 PF01479 S4 domain YE105_RS14160 PF00271 Helicase conserved C-terminal domain YE105_RS14160 PF04851 Type III restriction enzyme, res subunit YE105_RS14165 PF01386 Ribosomal L25p family YE105_RS14170 PF04245 37-kD nucleoid-associated bacterial protein YE105_RS14175 PF07208 Protein of unknown function (DUF1414) YE105_RS14180 PF00884 Sulfatase YE105_RS14180 PF11893 Domain of unknown function (DUF3413) YE105_RS14230 PF00194 Eukaryotic-type carbonic anhydrase YE105_RS14235 PF00232 Glycosyl hydrolase family 1 YE105_RS14240 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 YE105_RS14240 PF00367 phosphotransferase system, EIIB YE105_RS14240 PF02378 Phosphotransferase system, EIIC YE105_RS14245 PF01380 SIS domain YE105_RS14245 PF01418 Helix-turn-helix domain, rpiR family YE105_RS14265 PF06530 Phage antitermination protein Q YE105_RS14275 PF06183 DinI-like family YE105_RS14280 PF01278 Omptin family YE105_RS14285 PF02743 Cache domain YE105_RS14285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YE105_RS14285 PF00672 HAMP domain YE105_RS14290 PF12706 Beta-lactamase superfamily domain YE105_RS14300 PF00144 Beta-lactamase YE105_RS14315 PF00267 Gram-negative porin YE105_RS14335 PF07690 Major Facilitator Superfamily YE105_RS14340 PF16359 RcsD-ABL domain YE105_RS14340 PF01627 Hpt domain YE105_RS14340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YE105_RS14345 PF00072 Response regulator receiver domain YE105_RS14345 PF00196 Bacterial regulatory proteins, luxR family YE105_RS14350 PF00072 Response regulator receiver domain YE105_RS14350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YE105_RS14350 PF09456 RcsC Alpha-Beta-Loop (ABL) YE105_RS14350 PF00512 His Kinase A (phospho-acceptor) domain YE105_RS14355 PF03989 DNA gyrase C-terminal domain, beta-propeller YE105_RS14355 PF00521 DNA gyrase/topoisomerase IV, subunit A YE105_RS14365 PF03477 ATP cone domain YE105_RS14365 PF02867 Ribonucleotide reductase, barrel domain YE105_RS14365 PF00317 Ribonucleotide reductase, all-alpha domain YE105_RS14370 PF00268 Ribonucleotide reductase, small chain YE105_RS14375 PF00111 2Fe-2S iron-sulfur cluster binding domain YE105_RS14380 PF03974 Ecotin YE105_RS14385 PF00082 Subtilase family YE105_RS14400 PF00994 Probable molybdopterin binding domain YE105_RS14405 PF03222 Tryptophan/tyrosine permease family YE105_RS14410 PF07437 YfaZ precursor YE105_RS14415 PF06628 Catalase-related immune-responsive YE105_RS14415 PF00199 Catalase YE105_RS14420 PF13193 AMP-binding enzyme C-terminal domain YE105_RS14420 PF00501 AMP-binding enzyme YE105_RS14425 PF13378 Enolase C-terminal domain-like YE105_RS14430 PF00378 Enoyl-CoA hydratase/isomerase YE105_RS14435 PF12697 Alpha/beta hydrolase family YE105_RS14440 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YE105_RS14440 PF16582 Middle domain of thiamine pyrophosphate YE105_RS14440 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YE105_RS14445 PF00425 chorismate binding enzyme YE105_RS14450 PF00872 Transposase, Mutator family YE105_RS14455 PF05957 Bacterial protein of unknown function (DUF883) YE105_RS14460 PF00920 Dehydratase family YE105_RS14465 PF03928 Haem-degrading YE105_RS14470 PF07690 Major Facilitator Superfamily YE105_RS14475 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YE105_RS14475 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YE105_RS14485 PF00106 short chain dehydrogenase YE105_RS14490 PF01202 Shikimate kinase YE105_RS14500 PF06496 Protein of unknown function (DUF1097) YE105_RS14510 PF00361 Proton-conducting membrane transporter YE105_RS14515 PF00361 Proton-conducting membrane transporter YE105_RS14520 PF00361 Proton-conducting membrane transporter YE105_RS14520 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus YE105_RS14525 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L YE105_RS14530 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 YE105_RS14535 PF12838 4Fe-4S dicluster domain YE105_RS14540 PF00146 NADH dehydrogenase YE105_RS14545 PF00384 Molybdopterin oxidoreductase YE105_RS14545 PF01568 Molydopterin dinucleotide binding domain YE105_RS14545 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region YE105_RS14545 PF04879 Molybdopterin oxidoreductase Fe4S4 domain YE105_RS14550 PF10531 SLBB domain YE105_RS14550 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region YE105_RS14550 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit YE105_RS14560 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit YE105_RS14560 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit YE105_RS14565 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit YE105_RS14570 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 YE105_RS14575 PF03466 LysR substrate binding domain YE105_RS14575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YE105_RS14580 PF00155 Aminotransferase class I and II YE105_RS14590 PF03600 Citrate transporter YE105_RS14590 PF02080 TrkA-C domain YE105_RS14600 PF13419 Haloacid dehalogenase-like hydrolase YE105_RS14605 PF03887 YfbU domain YE105_RS14610 PF04217 Protein of unknown function, DUF412 YE105_RS14615 PF00871 Acetokinase family YE105_RS14620 PF07085 DRTGG domain YE105_RS14620 PF01515 Phosphate acetyl/butaryl transferase YE105_RS14625 PF00356 Bacterial regulatory proteins, lacI family YE105_RS14625 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family YE105_RS14630 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YE105_RS14640 PF03611 PTS system sugar-specific permease component YE105_RS14650 PF00293 NUDIX domain YE105_RS14655 PF12850 Calcineurin-like phosphoesterase superfamily domain YE105_RS14665 PF01370 NAD dependent epimerase/dehydratase family YE105_RS14665 PF08338 Domain of unknown function (DUF1731) YE105_RS14675 PF00005 ABC transporter YE105_RS14680 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS14685 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS14690 PF00497 Bacterial extracellular solute-binding proteins, family 3 YE105_RS14695 PF02441 Flavoprotein YE105_RS14700 PF00156 Phosphoribosyl transferase domain YE105_RS14705 PF02674 Colicin V production protein YE105_RS14710 PF05036 Sporulation related domain YE105_RS14715 PF08245 Mur ligase middle domain YE105_RS14715 PF02875 Mur ligase family, glutamate ligase domain YE105_RS14720 PF01039 Carboxyl transferase domain YE105_RS14720 PF17848 Acetyl-coA carboxylase zinc finger domain YE105_RS14725 PF09335 SNARE associated Golgi protein YE105_RS14730 PF01416 tRNA pseudouridine synthase YE105_RS14735 PF02774 Semialdehyde dehydrogenase, dimerisation domain YE105_RS14735 PF01118 Semialdehyde dehydrogenase, NAD binding domain YE105_RS14740 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YE105_RS14740 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YE105_RS14740 PF11890 Domain of unknown function (DUF3410) YE105_RS14750 PF00892 EamA-like transporter family YE105_RS14755 PF00892 EamA-like transporter family YE105_RS14760 PF00155 Aminotransferase class I and II YE105_RS14765 PF00578 AhpC/TSA family YE105_RS14775 PF02683 Cytochrome C biogenesis protein transmembrane region YE105_RS14775 PF11412 Disulphide bond corrector protein DsbC YE105_RS14790 PF03600 Citrate transporter YE105_RS14795 PF00328 Histidine phosphatase superfamily (branch 2) YE105_RS14800 PF00356 Bacterial regulatory proteins, lacI family YE105_RS14805 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit YE105_RS14810 PF02378 Phosphotransferase system, EIIC YE105_RS14815 PF00232 Glycosyl hydrolase family 1 YE105_RS14820 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit YE105_RS14830 PF01177 Asp/Glu/Hydantoin racemase YE105_RS14835 PF00990 Diguanylate cyclase, GGDEF domain YE105_RS14835 PF17151 Periplasmic sensor domain YE105_RS14840 PF02801 Beta-ketoacyl synthase, C-terminal domain YE105_RS14840 PF00109 Beta-ketoacyl synthase, N-terminal domain YE105_RS14845 PF01266 FAD dependent oxidoreductase YE105_RS14845 PF05430 S-adenosyl-L-methionine-dependent methyltransferase YE105_RS14850 PF08891 YfcL protein YE105_RS14855 PF04315 Elongation factor P hydroxylase YE105_RS14860 PF01925 Sulfite exporter TauE/SafE YE105_RS14865 PF03411 Penicillin-insensitive murein endopeptidase YE105_RS14870 PF01264 Chorismate synthase YE105_RS14875 PF05175 Methyltransferase small domain YE105_RS14880 PF01713 Smr domain YE105_RS14885 PF00300 Histidine phosphatase superfamily (branch 1) YE105_RS14890 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YE105_RS14890 PF00378 Enoyl-CoA hydratase/isomerase YE105_RS14890 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain YE105_RS14895 PF02803 Thiolase, C-terminal domain YE105_RS14895 PF00108 Thiolase, N-terminal domain YE105_RS14900 PF04175 Protein of unknown function (DUF406) YE105_RS14905 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) YE105_RS14910 PF04333 MlaA lipoprotein YE105_RS14915 PF03918 Cytochrome C biogenesis protein YE105_RS14920 PF03918 Cytochrome C biogenesis protein YE105_RS14925 PF08534 Redoxin YE105_RS14930 PF01578 Cytochrome C assembly protein YE105_RS14930 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal YE105_RS14935 PF03100 CcmE YE105_RS14940 PF04995 Heme exporter protein D (CcmD) YE105_RS14945 PF01578 Cytochrome C assembly protein YE105_RS14950 PF03379 CcmB protein YE105_RS14955 PF00005 ABC transporter YE105_RS14970 PF01226 Formate/nitrite transporter YE105_RS14980 PF13356 Arm DNA-binding domain YE105_RS14980 PF14659 Phage integrase, N-terminal SAM-like domain YE105_RS14980 PF00589 Phage integrase family YE105_RS15045 PF03831 PhnA domain YE105_RS15045 PF08274 PhnA Zinc-Ribbon YE105_RS15050 PF03551 Transcriptional regulator PadR-like family YE105_RS15060 PF00232 Glycosyl hydrolase family 1 YE105_RS15065 PF02378 Phosphotransferase system, EIIC YE105_RS15065 PF00367 phosphotransferase system, EIIB YE105_RS15070 PF00356 Bacterial regulatory proteins, lacI family YE105_RS15075 PF04264 YceI-like domain YE105_RS15080 PF01292 Prokaryotic cytochrome b561 YE105_RS15085 PF07859 alpha/beta hydrolase fold YE105_RS15085 PF13472 GDSL-like Lipase/Acylhydrolase family YE105_RS15105 PF00005 ABC transporter YE105_RS15110 PF02405 Permease MlaE YE105_RS15115 PF07690 Major Facilitator Superfamily YE105_RS15125 PF07969 Amidohydrolase family YE105_RS15135 PF07969 Amidohydrolase family YE105_RS15140 PF00324 Amino acid permease YE105_RS15145 PF13406 Transglycosylase SLT domain YE105_RS15155 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS15160 PF00005 ABC transporter YE105_RS15165 PF01810 LysE type translocator YE105_RS15180 PF01292 Prokaryotic cytochrome b561 YE105_RS15185 PF00155 Aminotransferase class I and II YE105_RS15195 PF07350 Protein of unknown function (DUF1479) YE105_RS15200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YE105_RS15200 PF07694 5TMR of 5TMR-LYT YE105_RS15200 PF06580 Histidine kinase YE105_RS15205 PF04397 LytTr DNA-binding domain YE105_RS15205 PF00072 Response regulator receiver domain YE105_RS15210 PF07690 Major Facilitator Superfamily YE105_RS15225 PF02685 Glucokinase YE105_RS15235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YE105_RS15235 PF03466 LysR substrate binding domain YE105_RS15240 PF00205 Thiamine pyrophosphate enzyme, central domain YE105_RS15240 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YE105_RS15240 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YE105_RS15245 PF00248 Aldo/keto reductase family YE105_RS15255 PF01566 Natural resistance-associated macrophage protein YE105_RS15260 PF01773 Na+ dependent nucleoside transporter N-terminus YE105_RS15260 PF07662 Na+ dependent nucleoside transporter C-terminus YE105_RS15260 PF07670 Nucleoside recognition YE105_RS15275 PF00749 tRNA synthetases class I (E and Q), catalytic domain YE105_RS15305 PF12843 Putative quorum-sensing-regulated virulence factor YE105_RS15310 PF12826 Helix-hairpin-helix motif YE105_RS15310 PF03119 NAD-dependent DNA ligase C4 zinc finger domain YE105_RS15310 PF00533 BRCA1 C Terminus (BRCT) domain YE105_RS15310 PF01653 NAD-dependent DNA ligase adenylation domain YE105_RS15310 PF03120 NAD-dependent DNA ligase OB-fold domain YE105_RS15315 PF04354 ZipA, C-terminal FtsZ-binding domain YE105_RS15325 PF00291 Pyridoxal-phosphate dependent enzyme YE105_RS15330 PF00381 PTS HPr component phosphorylation site YE105_RS15335 PF05524 PEP-utilising enzyme, N-terminal YE105_RS15335 PF02896 PEP-utilising enzyme, TIM barrel domain YE105_RS15335 PF00391 PEP-utilising enzyme, mobile domain YE105_RS15340 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 YE105_RS15345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YE105_RS15345 PF00512 His Kinase A (phospho-acceptor) domain YE105_RS15345 PF00672 HAMP domain YE105_RS15345 PF16527 Two-component sensor protein CpxA, periplasmic domain YE105_RS15350 PF00486 Transcriptional regulatory protein, C terminal YE105_RS15350 PF00072 Response regulator receiver domain YE105_RS15355 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YE105_RS15360 PF12704 MacB-like periplasmic core domain YE105_RS15360 PF02687 FtsX-like permease family YE105_RS15360 PF00005 ABC transporter YE105_RS15365 PF00291 Pyridoxal-phosphate dependent enzyme YE105_RS15370 PF00005 ABC transporter YE105_RS15375 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS15380 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS15390 PF07690 Major Facilitator Superfamily YE105_RS15395 PF01418 Helix-turn-helix domain, rpiR family YE105_RS15395 PF01380 SIS domain YE105_RS15400 PF04074 YhcH/YjgK/YiaL YE105_RS15405 PF00480 ROK family YE105_RS15410 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase YE105_RS15415 PF00701 Dihydrodipicolinate synthetase family YE105_RS15425 PF04261 Dyp-type peroxidase family YE105_RS15430 PF06572 Protein of unknown function (DUF1131) YE105_RS15435 PF04076 Bacterial OB fold (BOF) protein YE105_RS15440 PF00583 Acetyltransferase (GNAT) family YE105_RS15445 PF01218 Coproporphyrinogen III oxidase YE105_RS15450 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 YE105_RS15455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YE105_RS15455 PF03466 LysR substrate binding domain YE105_RS15465 PF01515 Phosphate acetyl/butaryl transferase YE105_RS15465 PF03949 Malic enzyme, NAD binding domain YE105_RS15465 PF00390 Malic enzyme, N-terminal domain YE105_RS15470 PF00293 NUDIX domain YE105_RS15475 PF03264 NapC/NirT cytochrome c family, N-terminal region YE105_RS15480 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) YE105_RS15485 PF00384 Molybdopterin oxidoreductase YE105_RS15485 PF10518 TAT (twin-arginine translocation) pathway signal sequence YE105_RS15485 PF01568 Molydopterin dinucleotide binding domain YE105_RS15485 PF04879 Molybdopterin oxidoreductase Fe4S4 domain YE105_RS15490 PF03927 NapD protein YE105_RS15500 PF00196 Bacterial regulatory proteins, luxR family YE105_RS15500 PF00072 Response regulator receiver domain YE105_RS15510 PF00873 AcrB/AcrD/AcrF family YE105_RS15525 PF03960 ArsC family YE105_RS15530 PF07687 Peptidase dimerisation domain YE105_RS15530 PF01546 Peptidase family M20/M25/M40 YE105_RS15535 PF02557 D-alanyl-D-alanine carboxypeptidase YE105_RS15540 PF13980 Uncharacterised protein family (UPF0370) YE105_RS15550 PF13505 Outer membrane protein beta-barrel domain YE105_RS15565 PF02371 Transposase IS116/IS110/IS902 family YE105_RS15565 PF01548 Transposase YE105_RS15570 PF03245 Bacteriophage Rz lysis protein YE105_RS15580 PF02230 Phospholipase/Carboxylesterase YE105_RS15590 PF05127 Helicase YE105_RS15590 PF17176 tRNA-binding domain YE105_RS15590 PF13718 GNAT acetyltransferase 2 YE105_RS15595 PF04284 Protein of unknown function (DUF441) YE105_RS15605 PF01259 SAICAR synthetase YE105_RS15610 PF06804 NlpB/DapX lipoprotein YE105_RS15615 PF00701 Dihydrodipicolinate synthetase family YE105_RS15620 PF01842 ACT domain YE105_RS15625 PF00578 AhpC/TSA family YE105_RS15630 PF01594 AI-2E family transporter YE105_RS15635 PF07720 Tetratricopeptide repeat YE105_RS15635 PF01435 Peptidase family M48 YE105_RS15640 PF03960 ArsC family YE105_RS15645 PF00308 Bacterial dnaA protein YE105_RS15650 PF00860 Permease family YE105_RS15660 PF00586 AIR synthase related protein, N-terminal domain YE105_RS15660 PF02769 AIR synthase related protein, C-terminal domain YE105_RS15665 PF00551 Formyl transferase YE105_RS15670 PF13302 Acetyltransferase (GNAT) domain YE105_RS15680 PF00005 ABC transporter YE105_RS15685 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS15690 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS15695 PF17941 Polyphosphate kinase C-terminal domain 1 YE105_RS15695 PF02503 Polyphosphate kinase middle domain YE105_RS15695 PF13089 Polyphosphate kinase N-terminal domain YE105_RS15695 PF13090 Polyphosphate kinase C-terminal domain 2 YE105_RS15700 PF02541 Ppx/GppA phosphatase family YE105_RS15710 PF00571 CBS domain YE105_RS15710 PF01769 Divalent cation transporter YE105_RS15710 PF03448 MgtE intracellular N domain YE105_RS15715 PF00990 Diguanylate cyclase, GGDEF domain YE105_RS15715 PF05231 MASE1 YE105_RS15715 PF08447 PAS fold YE105_RS15715 PF08448 PAS fold YE105_RS15715 PF13426 PAS domain YE105_RS15715 PF00563 EAL domain YE105_RS15720 PF00012 Hsp70 protein YE105_RS15725 PF13533 Biotin-lipoyl like YE105_RS15730 PF00873 AcrB/AcrD/AcrF family YE105_RS15735 PF00873 AcrB/AcrD/AcrF family YE105_RS15740 PF07690 Major Facilitator Superfamily YE105_RS15745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YE105_RS15745 PF00672 HAMP domain YE105_RS15745 PF00512 His Kinase A (phospho-acceptor) domain YE105_RS15750 PF00072 Response regulator receiver domain YE105_RS15750 PF00486 Transcriptional regulatory protein, C terminal YE105_RS15755 PF07411 Domain of unknown function (DUF1508) YE105_RS15760 PF16325 Peptidase family U32 C-terminal domain YE105_RS15760 PF01136 Peptidase family U32 YE105_RS15765 PF00781 Diacylglycerol kinase catalytic domain YE105_RS15770 PF03608 PTS system enzyme II sorbitol-specific factor YE105_RS15775 PF07663 Sorbitol phosphotransferase enzyme II C-terminus YE105_RS15775 PF03612 Sorbitol phosphotransferase enzyme II N-terminus YE105_RS15780 PF03829 PTS system glucitol/sorbitol-specific IIA component YE105_RS15785 PF00106 short chain dehydrogenase YE105_RS15790 PF06923 Glucitol operon activator protein (GutM) YE105_RS15795 PF08220 DeoR-like helix-turn-helix domain YE105_RS15795 PF00455 DeoR C terminal sensor domain YE105_RS15800 PF00571 CBS domain YE105_RS15800 PF01380 SIS domain YE105_RS15815 PF08543 Phosphomethylpyrimidine kinase YE105_RS15830 PF00034 Cytochrome c YE105_RS15830 PF13442 Cytochrome C oxidase, cbb3-type, subunit III YE105_RS15835 PF00732 GMC oxidoreductase YE105_RS15835 PF05199 GMC oxidoreductase YE105_RS15850 PF00958 GMP synthase C terminal domain YE105_RS15850 PF00117 Glutamine amidotransferase class-I YE105_RS15850 PF02540 NAD synthase YE105_RS15855 PF00571 CBS domain YE105_RS15855 PF00478 IMP dehydrogenase / GMP reductase domain YE105_RS15860 PF13742 OB-fold nucleic acid binding domain YE105_RS15860 PF02601 Exonuclease VII, large subunit YE105_RS15865 PF07191 zinc-ribbons YE105_RS15880 PF01926 50S ribosome-binding GTPase YE105_RS15880 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal YE105_RS15890 PF13360 PQQ-like domain YE105_RS15895 PF09976 Tetratricopeptide repeat-like domain YE105_RS15900 PF03129 Anticodon binding domain YE105_RS15900 PF13393 Histidyl-tRNA synthetase YE105_RS15905 PF04551 GcpE protein YE105_RS15910 PF13464 Domain of unknown function (DUF4115) YE105_RS15920 PF04055 Radical SAM superfamily YE105_RS15925 PF00334 Nucleoside diphosphate kinase YE105_RS15935 PF06832 Penicillin-Binding Protein C-terminus Family YE105_RS15935 PF00912 Transglycosylase YE105_RS15935 PF00905 Penicillin binding protein transpeptidase domain YE105_RS15940 PF07703 Alpha-2-macroglobulin bait region domain YE105_RS15940 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain YE105_RS15940 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain YE105_RS15940 PF11974 Bacterial alpha-2-macroglobulin MG3 domain YE105_RS15940 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain YE105_RS15940 PF17962 Bacterial macroglobulin domain 6 YE105_RS15940 PF00207 Alpha-2-macroglobulin family YE105_RS15940 PF07678 A-macroglobulin TED domain YE105_RS15940 PF01835 MG2 domain YE105_RS15945 PF16168 Adhesin of bacterial autotransporter system, probable stalk YE105_RS15945 PF03797 Autotransporter beta-domain YE105_RS15945 PF03212 Pertactin YE105_RS15950 PF14581 SseB protein C-terminal domain YE105_RS15950 PF07179 SseB protein N-terminal domain YE105_RS15955 PF12404 Peptidase YE105_RS15955 PF00883 Cytosol aminopeptidase family, catalytic domain YE105_RS15960 PF04384 Iron-sulphur cluster assembly YE105_RS15965 PF00111 2Fe-2S iron-sulfur cluster binding domain YE105_RS15970 PF00012 Hsp70 protein YE105_RS15975 PF07743 HSCB C-terminal oligomerisation domain YE105_RS15975 PF00226 DnaJ domain YE105_RS15980 PF01521 Iron-sulphur cluster biosynthesis YE105_RS15985 PF01592 NifU-like N terminal domain YE105_RS15990 PF00266 Aminotransferase class-V YE105_RS15995 PF02082 Transcriptional regulator YE105_RS16000 PF00588 SpoU rRNA Methylase family YE105_RS16005 PF00459 Inositol monophosphatase family YE105_RS16010 PF03824 High-affinity nickel-transport protein YE105_RS16015 PF06226 Protein of unknown function (DUF1007) YE105_RS16020 PF00874 PRD domain YE105_RS16025 PF12832 MFS_1 like family YE105_RS16030 PF00464 Serine hydroxymethyltransferase YE105_RS16035 PF00970 Oxidoreductase FAD-binding domain YE105_RS16035 PF00175 Oxidoreductase NAD-binding domain YE105_RS16035 PF00042 Globin YE105_RS16040 PF14503 YhfZ C-terminal domain YE105_RS16040 PF14502 Helix-turn-helix domain YE105_RS16050 PF01168 Alanine racemase, N-terminal domain YE105_RS16055 PF02126 Phosphotriesterase family YE105_RS16060 PF10941 Protein of unknown function DUF2620 YE105_RS16065 PF10797 Protein of unknown function YE105_RS16070 PF00543 Nitrogen regulatory protein P-II YE105_RS16075 PF02540 NAD synthase YE105_RS16075 PF00795 Carbon-nitrogen hydrolase YE105_RS16080 PF00158 Sigma-54 interaction domain YE105_RS16080 PF00072 Response regulator receiver domain YE105_RS16085 PF13942 YfhG lipoprotein YE105_RS16090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YE105_RS16090 PF00512 His Kinase A (phospho-acceptor) domain YE105_RS16100 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain YE105_RS16100 PF02769 AIR synthase related protein, C-terminal domain YE105_RS16100 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal YE105_RS16105 PF00497 Bacterial extracellular solute-binding proteins, family 3 YE105_RS16105 PF01464 Transglycosylase SLT domain YE105_RS16110 PF14437 MafB19-like deaminase YE105_RS16125 PF01380 SIS domain YE105_RS16130 PF01380 SIS domain YE105_RS16130 PF01418 Helix-turn-helix domain, rpiR family YE105_RS16135 PF12838 4Fe-4S dicluster domain YE105_RS16140 PF02447 GntP family permease YE105_RS16145 PF01648 4'-phosphopantetheinyl transferase superfamily YE105_RS16150 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ YE105_RS16155 PF11967 Recombination protein O N terminal YE105_RS16155 PF02565 Recombination protein O C terminal YE105_RS16160 PF01926 50S ribosome-binding GTPase YE105_RS16160 PF07650 KH domain YE105_RS16165 PF00035 Double-stranded RNA binding motif YE105_RS16165 PF14622 Ribonuclease-III-like YE105_RS16170 PF10502 Signal peptidase, peptidase S26 YE105_RS16175 PF03144 Elongation factor Tu domain 2 YE105_RS16175 PF00009 Elongation factor Tu GTP binding domain YE105_RS16175 PF06421 GTP-binding protein LepA C-terminus YE105_RS16175 PF00679 Elongation factor G C-terminus YE105_RS16190 PF17188 MucB/RseB C-terminal domain YE105_RS16190 PF03888 MucB/RseB N-terminal domain YE105_RS16195 PF03873 Anti sigma-E protein RseA, C-terminal domain YE105_RS16195 PF03872 Anti sigma-E protein RseA, N-terminal domain YE105_RS16200 PF04542 Sigma-70 region 2 YE105_RS16200 PF08281 Sigma-70, region 4 YE105_RS16205 PF00890 FAD binding domain YE105_RS16205 PF02910 Fumarate reductase flavoprotein C-term YE105_RS16210 PF05175 Methyltransferase small domain YE105_RS16215 PF00271 Helicase conserved C-terminal domain YE105_RS16215 PF00270 DEAD/DEAH box helicase YE105_RS16220 PF02371 Transposase IS116/IS110/IS902 family YE105_RS16220 PF01548 Transposase YE105_RS16230 PF12796 Ankyrin repeats (3 copies) YE105_RS16245 PF01228 Glycine radical YE105_RS16250 PF03167 Uracil DNA glycosylase superfamily YE105_RS16255 PF01025 GrpE YE105_RS16260 PF01513 ATP-NAD kinase YE105_RS16265 PF02463 RecF/RecN/SMC N terminal domain YE105_RS16270 PF04355 SmpA / OmlA family YE105_RS16275 PF03658 RnfH family Ubiquitin YE105_RS16280 PF03364 Polyketide cyclase / dehydrase and lipid transport YE105_RS16285 PF01668 SmpB protein YE105_RS16290 PF00589 Phage integrase family YE105_RS16290 PF13356 Arm DNA-binding domain YE105_RS16310 PF00145 C-5 cytosine-specific DNA methylase YE105_RS16315 PF04917 Bacterial shufflon protein, N-terminal constant region YE105_RS16330 PF03389 MobA/MobL family YE105_RS16330 PF17841 BID domain of Bartonella effector protein (Bep) YE105_RS16330 PF01443 Viral (Superfamily 1) RNA helicase YE105_RS16335 PF01695 IstB-like ATP binding protein YE105_RS16340 PF00665 Integrase core domain YE105_RS16355 PF04794 YdjC-like protein YE105_RS16360 PF07883 Cupin domain YE105_RS16360 PF12833 Helix-turn-helix domain YE105_RS16365 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit YE105_RS16370 PF00232 Glycosyl hydrolase family 1 YE105_RS16375 PF02378 Phosphotransferase system, EIIC YE105_RS16380 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit YE105_RS16385 PF07995 Glucose / Sorbosone dehydrogenase YE105_RS16400 PF02537 CrcB-like protein, Camphor Resistance (CrcB) YE105_RS16405 PF02537 CrcB-like protein, Camphor Resistance (CrcB) YE105_RS16410 PF07885 Ion channel YE105_RS16410 PF02254 TrkA-N domain YE105_RS16415 PF06411 HdeA/HdeB family YE105_RS16420 PF03824 High-affinity nickel-transport protein YE105_RS16425 PF03253 Urea transporter YE105_RS16430 PF01774 UreD urease accessory protein YE105_RS16435 PF02492 CobW/HypB/UreG, nucleotide-binding domain YE105_RS16440 PF01730 UreF YE105_RS16445 PF05194 UreE urease accessory protein, C-terminal domain YE105_RS16445 PF02814 UreE urease accessory protein, N-terminal domain YE105_RS16450 PF01979 Amidohydrolase family YE105_RS16450 PF00449 Urease alpha-subunit, N-terminal domain YE105_RS16455 PF00699 Urease beta subunit YE105_RS16460 PF00547 Urease, gamma subunit YE105_RS16465 PF00005 ABC transporter YE105_RS16470 PF00005 ABC transporter YE105_RS16475 PF12911 N-terminal TM domain of oligopeptide transport permease C YE105_RS16475 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS16480 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS16485 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YE105_RS16515 PF00313 'Cold-shock' DNA-binding domain YE105_RS16530 PF09400 Protein of unknown function (DUF2002) YE105_RS16535 PF07690 Major Facilitator Superfamily YE105_RS16540 PF12833 Helix-turn-helix domain YE105_RS16550 PF06392 Acid shock protein repeat YE105_RS16560 PF05957 Bacterial protein of unknown function (DUF883) YE105_RS16565 PF00392 Bacterial regulatory proteins, gntR family YE105_RS16565 PF00155 Aminotransferase class I and II YE105_RS16570 PF02627 Carboxymuconolactone decarboxylase family YE105_RS16580 PF07972 NrdI Flavodoxin like YE105_RS16585 PF02867 Ribonucleotide reductase, barrel domain YE105_RS16585 PF00317 Ribonucleotide reductase, all-alpha domain YE105_RS16585 PF08343 Ribonucleotide reductase N-terminal YE105_RS16590 PF00268 Ribonucleotide reductase, small chain YE105_RS16595 PF00005 ABC transporter YE105_RS16595 PF00571 CBS domain YE105_RS16600 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS16605 PF04069 Substrate binding domain of ABC-type glycine betaine transport system YE105_RS16615 PF00929 Exonuclease YE105_RS16620 PF00075 RNase H YE105_RS16625 PF08241 Methyltransferase domain YE105_RS16630 PF00753 Metallo-beta-lactamase superfamily YE105_RS16630 PF16123 Hydroxyacylglutathione hydrolase C-terminus YE105_RS16635 PF01476 LysM domain YE105_RS16635 PF01464 Transglycosylase SLT domain YE105_RS16645 PF03372 Endonuclease/Exonuclease/phosphatase family YE105_RS16650 PF07690 Major Facilitator Superfamily YE105_RS16655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YE105_RS16655 PF03466 LysR substrate binding domain YE105_RS16660 PF00248 Aldo/keto reductase family YE105_RS16665 PF02801 Beta-ketoacyl synthase, C-terminal domain YE105_RS16665 PF00109 Beta-ketoacyl synthase, N-terminal domain YE105_RS16670 PF00872 Transposase, Mutator family YE105_RS16710 PF05552 Conserved TM helix YE105_RS16710 PF00924 Mechanosensitive ion channel YE105_RS16715 PF00102 Protein-tyrosine phosphatase YE105_RS16715 PF09013 YopH, N-terminal YE105_RS16720 PF01116 Fructose-bisphosphate aldolase class-II YE105_RS16725 PF00162 Phosphoglycerate kinase YE105_RS16730 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain YE105_RS16730 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain YE105_RS16735 PF00456 Transketolase, thiamine diphosphate binding domain YE105_RS16735 PF02780 Transketolase, C-terminal domain YE105_RS16735 PF02779 Transketolase, pyrimidine binding domain YE105_RS16740 PF01435 Peptidase family M48 YE105_RS16745 PF00355 Rieske [2Fe-2S] domain YE105_RS16750 PF17810 Arginine decarboxylase helical bundle domain YE105_RS16750 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain YE105_RS16750 PF17944 Arginine decarboxylase C-terminal helical extension YE105_RS16755 PF02772 S-adenosylmethionine synthetase, central domain YE105_RS16755 PF02773 S-adenosylmethionine synthetase, C-terminal domain YE105_RS16755 PF00438 S-adenosylmethionine synthetase, N-terminal domain YE105_RS16765 PF04143 Sulphur transport YE105_RS16775 PF17283 SprT-like zinc ribbon domain YE105_RS16775 PF10263 SprT-like family YE105_RS16780 PF04231 Endonuclease I YE105_RS16785 PF04452 RNA methyltransferase YE105_RS16790 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain YE105_RS16790 PF02951 Prokaryotic glutathione synthetase, N-terminal domain YE105_RS16795 PF02622 Uncharacterized ACR, COG1678 YE105_RS16800 PF03652 Holliday junction resolvase YE105_RS16805 PF00795 Carbon-nitrogen hydrolase YE105_RS16810 PF04371 Porphyromonas-type peptidyl-arginine deiminase YE105_RS16815 PF00437 Type II/IV secretion system protein YE105_RS16820 PF01168 Alanine racemase, N-terminal domain YE105_RS16825 PF03807 NADP oxidoreductase coenzyme F420-dependent YE105_RS16825 PF14748 Pyrroline-5-carboxylate reductase dimerisation YE105_RS16830 PF02325 YGGT family YE105_RS16835 PF02594 Uncharacterised ACR, YggU family COG1872 YE105_RS16840 PF01725 Ham1 family YE105_RS16845 PF04055 Radical SAM superfamily YE105_RS16845 PF06969 HemN C-terminal domain YE105_RS16850 PF11101 Protein of unknown function (DUF2884) YE105_RS16855 PF04960 Glutaminase YE105_RS16860 PF04320 Protein with unknown function (DUF469) YE105_RS16865 PF02390 Putative methyltransferase YE105_RS16870 PF10576 Iron-sulfur binding domain of endonuclease III YE105_RS16870 PF00633 Helix-hairpin-helix motif YE105_RS16870 PF00730 HhH-GPD superfamily base excision DNA repair protein YE105_RS16870 PF14815 NUDIX domain YE105_RS16875 PF04362 Bacterial Fe(2+) trafficking YE105_RS16880 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain YE105_RS16880 PF01464 Transglycosylase SLT domain YE105_RS16890 PF01276 Orn/Lys/Arg decarboxylase, major domain YE105_RS16890 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain YE105_RS16890 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain YE105_RS16905 PF00589 Phage integrase family YE105_RS16925 PF12759 InsA C-terminal domain YE105_RS16925 PF03811 InsA N-terminal domain YE105_RS16930 PF03400 IS1 transposase YE105_RS16945 PF13520 Amino acid permease YE105_RS16950 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain YE105_RS16950 PF01276 Orn/Lys/Arg decarboxylase, major domain YE105_RS16950 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain YE105_RS16960 PF04632 Fusaric acid resistance protein family YE105_RS16965 PF00529 HlyD membrane-fusion protein of T1SS YE105_RS16965 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YE105_RS16985 PF00557 Metallopeptidase family M24 YE105_RS16990 PF00005 ABC transporter YE105_RS16995 PF01032 FecCD transport family YE105_RS17000 PF01032 FecCD transport family YE105_RS17005 PF01497 Periplasmic binding protein YE105_RS17030 PF07690 Major Facilitator Superfamily YE105_RS17030 PF00083 Sugar (and other) transporter YE105_RS17035 PF00356 Bacterial regulatory proteins, lacI family YE105_RS17040 PF01156 Inosine-uridine preferring nucleoside hydrolase YE105_RS17045 PF02690 Na+/Pi-cotransporter YE105_RS17060 PF00083 Sugar (and other) transporter YE105_RS17060 PF08946 Osmosensory transporter coiled coil YE105_RS17070 PF00873 AcrB/AcrD/AcrF family YE105_RS17075 PF13533 Biotin-lipoyl like YE105_RS17080 PF08448 PAS fold YE105_RS17080 PF00990 Diguanylate cyclase, GGDEF domain YE105_RS17080 PF00563 EAL domain YE105_RS17080 PF08447 PAS fold YE105_RS17090 PF02110 Hydroxyethylthiazole kinase family YE105_RS17095 PF02661 Fic/DOC family YE105_RS17095 PF13784 Fic/DOC family N-terminal YE105_RS17100 PF00708 Acylphosphatase YE105_RS17100 PF07503 HypF finger YE105_RS17100 PF01300 Telomere recombination YE105_RS17100 PF17788 HypF Kae1-like domain YE105_RS17105 PF02769 AIR synthase related protein, C-terminal domain YE105_RS17105 PF00586 AIR synthase related protein, N-terminal domain YE105_RS17110 PF01924 Hydrogenase formation hypA family YE105_RS17115 PF01455 HupF/HypC family YE105_RS17120 PF02492 CobW/HypB/UreG, nucleotide-binding domain YE105_RS17125 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA YE105_RS17130 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE YE105_RS17135 PF01750 Hydrogenase maturation protease YE105_RS17140 PF00374 Nickel-dependent hydrogenase YE105_RS17145 PF03916 Polysulphide reductase, NrfD YE105_RS17150 PF13247 4Fe-4S dicluster domain YE105_RS17155 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit YE105_RS17155 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal YE105_RS17160 PF05433 Glycine zipper 2TM domain YE105_RS17165 PF13677 Membrane MotB of proton-channel complex MotA/MotB YE105_RS17165 PF00691 OmpA family YE105_RS17170 PF01618 MotA/TolQ/ExbB proton channel family YE105_RS17175 PF04542 Sigma-70 region 2 YE105_RS17175 PF04545 Sigma-70, region 4 YE105_RS17195 PF02561 Flagellar protein FliS YE105_RS17200 PF02465 Flagellar hook-associated protein 2 N-terminus YE105_RS17200 PF07196 Flagellin hook IN motif YE105_RS17200 PF07195 Flagellar hook-associated protein 2 C-terminus YE105_RS17205 PF00700 Bacterial flagellin C-terminal helical region YE105_RS17205 PF00669 Bacterial flagellin N-terminal helical region YE105_RS17210 PF00486 Transcriptional regulatory protein, C terminal YE105_RS17210 PF18500 CadC C-terminal domain 1 YE105_RS17240 PF02119 Flagellar P-ring protein YE105_RS17245 PF02107 Flagellar L-ring protein YE105_RS17250 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YE105_RS17250 PF00460 Flagella basal body rod protein YE105_RS17255 PF00460 Flagella basal body rod protein YE105_RS17255 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YE105_RS17260 PF07559 Flagellar basal body protein FlaE YE105_RS17260 PF00460 Flagella basal body rod protein YE105_RS17260 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YE105_RS17265 PF03963 Flagellar hook capping protein - N-terminal region YE105_RS17265 PF13861 FlgD Tudor-like domain YE105_RS17265 PF13860 FlgD Ig-like domain YE105_RS17270 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YE105_RS17270 PF00460 Flagella basal body rod protein YE105_RS17275 PF00460 Flagella basal body rod protein YE105_RS17305 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain YE105_RS17305 PF18269 T3SS EscN ATPase C-terminal domain YE105_RS17320 PF08345 Flagellar M-ring protein C-terminal YE105_RS17320 PF01514 Secretory protein of YscJ/FliF family YE105_RS17325 PF02049 Flagellar hook-basal body complex protein FliE YE105_RS17330 PF00072 Response regulator receiver domain YE105_RS17330 PF02954 Bacterial regulatory protein, Fis family YE105_RS17330 PF00158 Sigma-54 interaction domain YE105_RS17340 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term YE105_RS17345 PF00813 FliP family YE105_RS17350 PF01313 Bacterial export proteins, family 3 YE105_RS17355 PF01311 Bacterial export proteins, family 1 YE105_RS17360 PF01312 FlhB HrpN YscU SpaS Family YE105_RS17365 PF00771 FHIPEP family YE105_RS17375 PF02203 Tar ligand binding domain homologue YE105_RS17375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YE105_RS17375 PF00672 HAMP domain YE105_RS17380 PF01370 NAD dependent epimerase/dehydratase family YE105_RS17385 PF07690 Major Facilitator Superfamily YE105_RS17390 PF01497 Periplasmic binding protein YE105_RS17395 PF01032 FecCD transport family YE105_RS17400 PF01032 FecCD transport family YE105_RS17405 PF00005 ABC transporter YE105_RS17410 PF00756 Putative esterase YE105_RS17410 PF11806 Domain of unknown function (DUF3327) YE105_RS17420 PF13333 Integrase core domain YE105_RS17420 PF00665 Integrase core domain YE105_RS17420 PF13276 HTH-like domain YE105_RS17430 PF12833 Helix-turn-helix domain YE105_RS17435 PF02687 FtsX-like permease family YE105_RS17435 PF00005 ABC transporter YE105_RS17435 PF12704 MacB-like periplasmic core domain YE105_RS17455 PF12833 Helix-turn-helix domain YE105_RS17470 PF02586 SOS response associated peptidase (SRAP) YE105_RS17475 PF00873 AcrB/AcrD/AcrF family YE105_RS17480 PF13532 2OG-Fe(II) oxygenase superfamily YE105_RS17505 PF00263 Bacterial type II and III secretion system protein YE105_RS17505 PF13629 Pilus formation protein N terminal region YE105_RS17505 PF04972 BON domain YE105_RS17520 PF00437 Type II/IV secretion system protein YE105_RS17555 PF02472 Biopolymer transport protein ExbD/TolR YE105_RS17560 PF01618 MotA/TolQ/ExbB proton channel family YE105_RS17565 PF01053 Cys/Met metabolism PLP-dependent enzyme YE105_RS17570 PF09335 SNARE associated Golgi protein YE105_RS17575 PF06719 AraC-type transcriptional regulator N-terminus YE105_RS17575 PF12833 Helix-turn-helix domain YE105_RS17580 PF00465 Iron-containing alcohol dehydrogenase YE105_RS17585 PF00248 Aldo/keto reductase family YE105_RS17590 PF11842 Domain of unknown function (DUF3362) YE105_RS17590 PF04055 Radical SAM superfamily YE105_RS17590 PF08497 Radical SAM N-terminal YE105_RS17595 PF07732 Multicopper oxidase YE105_RS17595 PF07731 Multicopper oxidase YE105_RS17600 PF01553 Acyltransferase YE105_RS17605 PF00521 DNA gyrase/topoisomerase IV, subunit A YE105_RS17605 PF03989 DNA gyrase C-terminal domain, beta-propeller YE105_RS17610 PF02525 Flavodoxin-like fold YE105_RS17615 PF03992 Antibiotic biosynthesis monooxygenase YE105_RS17620 PF03466 LysR substrate binding domain YE105_RS17620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YE105_RS17625 PF00204 DNA gyrase B YE105_RS17625 PF00986 DNA gyrase B subunit, carboxyl terminus YE105_RS17625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YE105_RS17625 PF01751 Toprim domain YE105_RS17630 PF05728 Uncharacterised protein family (UPF0227) YE105_RS17635 PF00149 Calcineurin-like phosphoesterase YE105_RS17640 PF06853 Protein of unknown function (DUF1249) YE105_RS17645 PF00293 NUDIX domain YE105_RS17650 PF02321 Outer membrane efflux protein YE105_RS17655 PF06693 Protein of unknown function (DUF1190) YE105_RS17660 PF03738 Glutathionylspermidine synthase preATP-grasp YE105_RS17665 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase YE105_RS17670 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase YE105_RS17675 PF04380 Membrane fusogenic activity YE105_RS17680 PF13520 Amino acid permease YE105_RS17685 PF00294 pfkB family carbohydrate kinase YE105_RS17685 PF01467 Cytidylyltransferase-like YE105_RS17690 PF03710 Glutamate-ammonia ligase adenylyltransferase YE105_RS17690 PF08335 GlnD PII-uridylyltransferase YE105_RS17695 PF01928 CYTH domain YE105_RS17700 PF08239 Bacterial SH3 domain YE105_RS17705 PF01743 Poly A polymerase head domain YE105_RS17705 PF01966 HD domain YE105_RS17705 PF12627 Probable RNA and SrmB- binding site of polymerase A YE105_RS17710 PF02673 Bacitracin resistance protein BacA YE105_RS17715 PF02152 Dihydroneopterin aldolase YE105_RS17725 PF00814 Glycoprotease family YE105_RS17730 PF01165 Ribosomal protein S21 YE105_RS17735 PF08278 DNA primase DnaG DnaB-binding YE105_RS17735 PF10410 DnaB-helicase binding domain of primase YE105_RS17735 PF01807 CHC2 zinc finger YE105_RS17735 PF08275 DNA primase catalytic core, N-terminal domain YE105_RS17740 PF03979 Sigma-70 factor, region 1.1 YE105_RS17740 PF00140 Sigma-70 factor, region 1.2 YE105_RS17740 PF04545 Sigma-70, region 4 YE105_RS17740 PF04542 Sigma-70 region 2 YE105_RS17740 PF04546 Sigma-70, non-essential region YE105_RS17740 PF04539 Sigma-70 region 3 YE105_RS17755 PF07075 Protein of unknown function (DUF1343) YE105_RS17765 PF00933 Glycosyl hydrolase family 3 N terminal domain YE105_RS17765 PF01915 Glycosyl hydrolase family 3 C-terminal domain YE105_RS17770 PF01380 SIS domain YE105_RS17770 PF01418 Helix-turn-helix domain, rpiR family YE105_RS17775 PF13580 SIS domain YE105_RS17780 PF02378 Phosphotransferase system, EIIC YE105_RS17780 PF00367 phosphotransferase system, EIIB YE105_RS17785 PF04960 Glutaminase YE105_RS17790 PF13520 Amino acid permease YE105_RS17795 PF00282 Pyridoxal-dependent decarboxylase conserved domain YE105_RS17805 PF03729 Short repeat of unknown function (DUF308) YE105_RS17810 PF00892 EamA-like transporter family YE105_RS17815 PF00724 NADH:flavin oxidoreductase / NADH oxidase family YE105_RS17815 PF07992 Pyridine nucleotide-disulphide oxidoreductase YE105_RS17825 PF05175 Methyltransferase small domain YE105_RS17830 PF03797 Autotransporter beta-domain YE105_RS17845 PF01863 Protein of unknown function DUF45 YE105_RS17850 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YE105_RS17860 PF03741 Integral membrane protein TerC family YE105_RS17865 PF00375 Sodium:dicarboxylate symporter family YE105_RS17870 PF10688 Bacterial inner membrane protein YE105_RS17875 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus YE105_RS17875 PF08666 SAF domain YE105_RS17880 PF08125 Mannitol dehydrogenase C-terminal domain YE105_RS17880 PF01232 Mannitol dehydrogenase Rossmann domain YE105_RS17885 PF02614 Glucuronate isomerase YE105_RS17890 PF07690 Major Facilitator Superfamily YE105_RS17895 PF07729 FCD domain YE105_RS17895 PF00392 Bacterial regulatory proteins, gntR family YE105_RS17905 PF09335 SNARE associated Golgi protein YE105_RS17910 PF13721 SecD export protein N-terminal TM region YE105_RS17920 PF05957 Bacterial protein of unknown function (DUF883) YE105_RS17925 PF07332 Putative Actinobacterial Holin-X, holin superfamily III YE105_RS17930 PF13997 YqjK-like protein YE105_RS17935 PF07681 DoxX YE105_RS17940 PF13409 Glutathione S-transferase, N-terminal domain YE105_RS17945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YE105_RS17945 PF03466 LysR substrate binding domain YE105_RS17950 PF17954 Quercetinase C-terminal cupin domain YE105_RS17950 PF02678 Pirin YE105_RS17955 PF00107 Zinc-binding dehydrogenase YE105_RS17955 PF08240 Alcohol dehydrogenase GroES-like domain YE105_RS17960 PF00248 Aldo/keto reductase family YE105_RS17965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YE105_RS17965 PF03466 LysR substrate binding domain YE105_RS17975 PF13953 PapC C-terminal domain YE105_RS17975 PF13954 PapC N-terminal domain YE105_RS17975 PF00577 Outer membrane usher protein YE105_RS17980 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain YE105_RS17980 PF02753 Pili assembly chaperone PapD, C-terminal domain YE105_RS17995 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YE105_RS18000 PF04348 LppC putative lipoprotein YE105_RS18005 PF02021 Uncharacterised protein family UPF0102 YE105_RS18010 PF13580 SIS domain YE105_RS18015 PF04972 BON domain YE105_RS18020 PF00912 Transglycosylase YE105_RS18030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YE105_RS18030 PF00512 His Kinase A (phospho-acceptor) domain YE105_RS18030 PF18415 Histidine kinase receptor ArcB trans-membrane domain YE105_RS18030 PF00989 PAS fold YE105_RS18030 PF00072 Response regulator receiver domain YE105_RS18030 PF01627 Hpt domain YE105_RS18035 PF16199 Radical_SAM C-terminal domain YE105_RS18035 PF04055 Radical SAM superfamily YE105_RS18040 PF00310 Glutamine amidotransferases class-II YE105_RS18040 PF01645 Conserved region in glutamate synthase YE105_RS18040 PF04898 Glutamate synthase central domain YE105_RS18040 PF01493 GXGXG motif YE105_RS18045 PF07992 Pyridine nucleotide-disulphide oxidoreductase YE105_RS18045 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster YE105_RS18060 PF04386 Stringent starvation protein B YE105_RS18065 PF00043 Glutathione S-transferase, C-terminal domain YE105_RS18065 PF02798 Glutathione S-transferase, N-terminal domain YE105_RS18070 PF00380 Ribosomal protein S9/S16 YE105_RS18075 PF00572 Ribosomal protein L13 YE105_RS18080 PF03969 AFG1-like ATPase YE105_RS18085 PF06295 Protein of unknown function (DUF1043) YE105_RS18090 PF13180 PDZ domain YE105_RS18090 PF00595 PDZ domain YE105_RS18095 PF13180 PDZ domain YE105_RS18100 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) YE105_RS18105 PF01722 BolA-like protein YE105_RS18110 PF13466 STAS domain YE105_RS18115 PF05494 MlaC protein YE105_RS18120 PF02470 MlaD protein YE105_RS18125 PF02405 Permease MlaE YE105_RS18130 PF00005 ABC transporter YE105_RS18135 PF01699 Sodium/calcium exchanger protein YE105_RS18140 PF01380 SIS domain YE105_RS18140 PF00571 CBS domain YE105_RS18150 PF06835 Lipopolysaccharide-assembly, LptC-related YE105_RS18155 PF03968 OstA-like protein YE105_RS18160 PF00005 ABC transporter YE105_RS18160 PF12399 Branched-chain amino acid ATP-binding cassette transporter YE105_RS18165 PF04552 Sigma-54, DNA binding domain YE105_RS18165 PF04963 Sigma-54 factor, core binding domain YE105_RS18165 PF00309 Sigma-54 factor, Activator interacting domain (AID) YE105_RS18170 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein YE105_RS18175 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YE105_RS18180 PF03668 P-loop ATPase protein family YE105_RS18185 PF00381 PTS HPr component phosphorylation site YE105_RS18190 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain YE105_RS18190 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain YE105_RS18195 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain YE105_RS18195 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain YE105_RS18200 PF01042 Endoribonuclease L-PSP YE105_RS18205 PF14403 Circularly permuted ATP-grasp type 2 YE105_RS18210 PF14403 Circularly permuted ATP-grasp type 2 YE105_RS18210 PF04168 A predicted alpha-helical domain with a conserved ER motif. YE105_RS18225 PF11941 Domain of unknown function (DUF3459) YE105_RS18225 PF00128 Alpha amylase, catalytic domain YE105_RS18230 PF00367 phosphotransferase system, EIIB YE105_RS18230 PF02378 Phosphotransferase system, EIIC YE105_RS18235 PF00356 Bacterial regulatory proteins, lacI family YE105_RS18240 PF00690 Cation transporter/ATPase, N-terminus YE105_RS18240 PF00689 Cation transporting ATPase, C-terminus YE105_RS18245 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB YE105_RS18250 PF01381 Helix-turn-helix YE105_RS18255 PF08279 HTH domain YE105_RS18255 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YE105_RS18255 PF00874 PRD domain YE105_RS18255 PF05043 Mga helix-turn-helix domain YE105_RS18260 PF10282 Lactonase, 7-bladed beta-propeller YE105_RS18265 PF07071 KDGP aldolase YE105_RS18270 PF03841 L-seryl-tRNA selenium transferase YE105_RS18275 PF01979 Amidohydrolase family YE105_RS18305 PF14760 Rnk N-terminus YE105_RS18305 PF01272 Transcription elongation factor, GreA/GreB, C-term YE105_RS18310 PF07361 Cytochrome b562 YE105_RS18320 PF01523 Putative modulator of DNA gyrase YE105_RS18325 PF04751 Protein of unknown function (DUF615) YE105_RS18330 PF01337 Barstar (barnase inhibitor) YE105_RS18340 PF00171 Aldehyde dehydrogenase family YE105_RS18345 PF04632 Fusaric acid resistance protein family YE105_RS18350 PF13533 Biotin-lipoyl like YE105_RS18355 PF07869 Protein of unknown function (DUF1656) YE105_RS18360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YE105_RS18360 PF03466 LysR substrate binding domain YE105_RS18365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YE105_RS18365 PF03466 LysR substrate binding domain YE105_RS18375 PF18413 Neuraminidase-like domain YE105_RS18375 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain YE105_RS18380 PF03534 Salmonella virulence plasmid 65kDa B protein YE105_RS18380 PF12256 Insecticide toxin TcdB middle/N-terminal region YE105_RS18380 PF12255 Insecticide toxin TcdB middle/C-terminal region YE105_RS18400 PF18807 Tripartite Tc toxins repeat YE105_RS18400 PF14431 YwqJ-like deaminase YE105_RS18415 PF01523 Putative modulator of DNA gyrase YE105_RS18420 PF00795 Carbon-nitrogen hydrolase YE105_RS18425 PF13502 AsmA-like C-terminal region YE105_RS18425 PF13116 Protein of unknown function YE105_RS18430 PF10150 Ribonuclease E/G family YE105_RS18430 PF00575 S1 RNA binding domain YE105_RS18435 PF02545 Maf-like protein YE105_RS18440 PF04093 rod shape-determining protein MreD YE105_RS18445 PF04085 rod shape-determining protein MreC YE105_RS18455 PF00990 Diguanylate cyclase, GGDEF domain YE105_RS18455 PF00563 EAL domain YE105_RS18455 PF17157 Gammaproteobacterial periplasmic sensor domain YE105_RS18460 PF00107 Zinc-binding dehydrogenase YE105_RS18460 PF08240 Alcohol dehydrogenase GroES-like domain YE105_RS18465 PF00174 Oxidoreductase molybdopterin binding domain YE105_RS18470 PF01794 Ferric reductase like transmembrane component YE105_RS18475 PF01220 Dehydroquinase class II YE105_RS18480 PF00364 Biotin-requiring enzyme YE105_RS18485 PF00289 Biotin carboxylase, N-terminal domain YE105_RS18485 PF02785 Biotin carboxylase C-terminal domain YE105_RS18485 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain YE105_RS18490 PF06196 Protein of unknown function (DUF997) YE105_RS18495 PF00474 Sodium:solute symporter family YE105_RS18505 PF01207 Dihydrouridine synthase (Dus) YE105_RS18510 PF02954 Bacterial regulatory protein, Fis family YE105_RS18515 PF00072 Response regulator receiver domain YE105_RS18515 PF00990 Diguanylate cyclase, GGDEF domain YE105_RS18520 PF05433 Glycine zipper 2TM domain YE105_RS18525 PF00313 'Cold-shock' DNA-binding domain YE105_RS18530 PF00313 'Cold-shock' DNA-binding domain YE105_RS18535 PF00939 Sodium:sulfate symporter transmembrane region YE105_RS18540 PF03279 Bacterial lipid A biosynthesis acyltransferase YE105_RS18550 PF00497 Bacterial extracellular solute-binding proteins, family 3 YE105_RS18555 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS18560 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS18565 PF00005 ABC transporter YE105_RS18575 PF03788 LrgA family YE105_RS18580 PF03466 LysR substrate binding domain YE105_RS18580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YE105_RS18585 PF00999 Sodium/hydrogen exchanger family YE105_RS18590 PF00860 Permease family YE105_RS18605 PF13657 HipA N-terminal domain YE105_RS18605 PF07804 HipA-like C-terminal domain YE105_RS18610 PF00436 Single-strand binding protein family YE105_RS18615 PF17760 UvrA interaction domain YE105_RS18615 PF17755 UvrA DNA-binding domain YE105_RS18615 PF00005 ABC transporter YE105_RS18620 PF04237 YjbR YE105_RS18630 PF00155 Aminotransferase class I and II YE105_RS18635 PF01168 Alanine racemase, N-terminal domain YE105_RS18635 PF00842 Alanine racemase, C-terminal domain YE105_RS18640 PF00772 DnaB-like helicase N terminal domain YE105_RS18640 PF03796 DnaB-like helicase C terminal domain YE105_RS18645 PF00107 Zinc-binding dehydrogenase YE105_RS18645 PF08240 Alcohol dehydrogenase GroES-like domain YE105_RS18655 PF09583 Phage shock protein G (Phageshock_PspG) YE105_RS18660 PF01207 Dihydrouridine synthase (Dus) YE105_RS18665 PF01757 Acyltransferase family YE105_RS18670 PF01475 Ferric uptake regulator family YE105_RS18675 PF05532 CsbD-like YE105_RS18680 PF01726 LexA DNA binding domain YE105_RS18680 PF00717 Peptidase S24-like YE105_RS18685 PF01219 Prokaryotic diacylglycerol kinase YE105_RS18690 PF01553 Acyltransferase YE105_RS18695 PF01040 UbiA prenyltransferase family YE105_RS18700 PF04345 Chorismate lyase YE105_RS18710 PF07148 Maltose operon periplasmic protein precursor (MalM) YE105_RS18715 PF02264 LamB porin YE105_RS18720 PF00005 ABC transporter YE105_RS18720 PF17912 MalK OB fold domain YE105_RS18725 PF01547 Bacterial extracellular solute-binding protein YE105_RS18730 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS18730 PF14785 Maltose transport system permease protein MalF P2 domain YE105_RS18735 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS18745 PF06146 Phosphate-starvation-inducible E YE105_RS18750 PF00342 Phosphoglucose isomerase YE105_RS18755 PF01842 ACT domain YE105_RS18755 PF00696 Amino acid kinase family YE105_RS18760 PF01758 Sodium Bile acid symporter family YE105_RS18765 PF08479 POTRA domain, ShlB-type YE105_RS18765 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB YE105_RS18765 PF17287 POTRA domain YE105_RS18770 PF05860 haemagglutination activity domain YE105_RS18770 PF13332 Hemagglutinin repeat YE105_RS18775 PF02310 B12 binding domain YE105_RS18775 PF02574 Homocysteine S-methyltransferase YE105_RS18775 PF02965 Vitamin B12 dependent methionine synthase, activation domain YE105_RS18775 PF00809 Pterin binding enzyme YE105_RS18775 PF02607 B12 binding domain YE105_RS18780 PF09339 IclR helix-turn-helix domain YE105_RS18780 PF01614 Bacterial transcriptional regulator YE105_RS18785 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) YE105_RS18790 PF00463 Isocitrate lyase family YE105_RS18795 PF01274 Malate synthase YE105_RS18800 PF04204 Homoserine O-succinyltransferase YE105_RS18805 PF02371 Transposase IS116/IS110/IS902 family YE105_RS18805 PF01548 Transposase YE105_RS18840 PF00132 Bacterial transferase hexapeptide (six repeats) YE105_RS18845 PF18317 Shikimate 5'-dehydrogenase C-terminal domain YE105_RS18845 PF08501 Shikimate dehydrogenase substrate binding domain YE105_RS18845 PF01488 Shikimate / quinate 5-dehydrogenase YE105_RS18850 PF01300 Telomere recombination YE105_RS18855 PF01396 Topoisomerase DNA binding C4 zinc finger YE105_RS18860 PF04361 Protein of unknown function (DUF494) YE105_RS18865 PF17782 DprA winged helix domain YE105_RS18865 PF02481 DNA recombination-mediator protein A YE105_RS18870 PF01327 Polypeptide deformylase YE105_RS18875 PF02911 Formyl transferase, C-terminal domain YE105_RS18875 PF00551 Formyl transferase YE105_RS18880 PF01189 16S rRNA methyltransferase RsmB/F YE105_RS18880 PF01029 NusB family YE105_RS18885 PF02254 TrkA-N domain YE105_RS18885 PF02080 TrkA-C domain YE105_RS18890 PF01741 Large-conductance mechanosensitive channel, MscL YE105_RS18900 PF03889 Alternative ribosome-rescue factor A YE105_RS18905 PF13411 MerR HTH family regulatory protein YE105_RS18910 PF09350 Domain of unknown function (DUF1992) YE105_RS18915 PF01196 Ribosomal protein L17 YE105_RS18920 PF01000 RNA polymerase Rpb3/RpoA insert domain YE105_RS18920 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain YE105_RS18920 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain YE105_RS18925 PF01479 S4 domain YE105_RS18925 PF00163 Ribosomal protein S4/S9 N-terminal domain YE105_RS18930 PF00411 Ribosomal protein S11 YE105_RS18935 PF00416 Ribosomal protein S13/S18 YE105_RS18940 PF00444 Ribosomal protein L36 YE105_RS18945 PF00344 SecY translocase YE105_RS18950 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A YE105_RS18955 PF00327 Ribosomal protein L30p/L7e YE105_RS18960 PF03719 Ribosomal protein S5, C-terminal domain YE105_RS18960 PF00333 Ribosomal protein S5, N-terminal domain YE105_RS18965 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast YE105_RS18970 PF00347 Ribosomal protein L6 YE105_RS18975 PF00410 Ribosomal protein S8 YE105_RS18980 PF00253 Ribosomal protein S14p/S29e YE105_RS18985 PF00281 Ribosomal protein L5 YE105_RS18985 PF00673 ribosomal L5P family C-terminus YE105_RS18990 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 YE105_RS18990 PF00467 KOW motif YE105_RS18995 PF00238 Ribosomal protein L14p/L23e YE105_RS19000 PF00366 Ribosomal protein S17 YE105_RS19005 PF00831 Ribosomal L29 protein YE105_RS19010 PF00252 Ribosomal protein L16p/L10e YE105_RS19015 PF07650 KH domain YE105_RS19015 PF00189 Ribosomal protein S3, C-terminal domain YE105_RS19020 PF00237 Ribosomal protein L22p/L17e YE105_RS19025 PF00203 Ribosomal protein S19 YE105_RS19030 PF00181 Ribosomal Proteins L2, RNA binding domain YE105_RS19030 PF03947 Ribosomal Proteins L2, C-terminal domain YE105_RS19035 PF00276 Ribosomal protein L23 YE105_RS19040 PF00573 Ribosomal protein L4/L1 family YE105_RS19045 PF00297 Ribosomal protein L3 YE105_RS19050 PF00338 Ribosomal protein S10p/S20e YE105_RS19055 PF00210 Ferritin-like domain YE105_RS19060 PF04324 BFD-like [2Fe-2S] binding domain YE105_RS19065 PF03143 Elongation factor Tu C-terminal domain YE105_RS19065 PF03144 Elongation factor Tu domain 2 YE105_RS19065 PF00009 Elongation factor Tu GTP binding domain YE105_RS19070 PF00009 Elongation factor Tu GTP binding domain YE105_RS19070 PF03144 Elongation factor Tu domain 2 YE105_RS19070 PF14492 Elongation Factor G, domain II YE105_RS19070 PF00679 Elongation factor G C-terminus YE105_RS19070 PF03764 Elongation factor G, domain IV YE105_RS19075 PF00177 Ribosomal protein S7p/S5e YE105_RS19080 PF00164 Ribosomal protein S12/S23 YE105_RS19085 PF04077 DsrH like protein YE105_RS19090 PF02635 DsrE/DsrF-like family YE105_RS19095 PF02635 DsrE/DsrF-like family YE105_RS19100 PF08348 YheO-like PAS domain YE105_RS19100 PF13309 HTH domain YE105_RS19105 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase YE105_RS19105 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase YE105_RS19110 PF04102 SlyX YE105_RS19115 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase YE105_RS19120 PF09526 Probable metal-binding protein (DUF2387) YE105_RS19125 PF02254 TrkA-N domain YE105_RS19125 PF00999 Sodium/hydrogen exchanger family YE105_RS19130 PF02525 Flavodoxin-like fold YE105_RS19135 PF00005 ABC transporter YE105_RS19135 PF12848 ABC transporter YE105_RS19140 PF00535 Glycosyl transferase family 2 YE105_RS19150 PF02668 Taurine catabolism dioxygenase TauD, TfdA family YE105_RS19155 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS19160 PF00005 ABC transporter YE105_RS19165 PF04069 Substrate binding domain of ABC-type glycine betaine transport system YE105_RS19170 PF02567 Phenazine biosynthesis-like protein YE105_RS19175 PF01810 LysE type translocator YE105_RS19180 PF00561 alpha/beta hydrolase fold YE105_RS19185 PF06794 Uncharacterised protein family (UPF0270) YE105_RS19190 PF00485 Phosphoribulokinase / Uridine kinase family YE105_RS19195 PF02566 OsmC-like protein YE105_RS19200 PF00027 Cyclic nucleotide-binding domain YE105_RS19200 PF13545 Crp-like helix-turn-helix domain YE105_RS19205 PF12805 FUSC-like inner membrane protein yccS YE105_RS19210 PF00202 Aminotransferase class-III YE105_RS19215 PF00117 Glutamine amidotransferase class-I YE105_RS19220 PF05872 Bacterial protein of unknown function (DUF853) YE105_RS19225 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD YE105_RS19230 PF02056 Family 4 glycosyl hydrolase YE105_RS19230 PF11975 Family 4 glycosyl hydrolase C-terminal domain YE105_RS19235 PF00356 Bacterial regulatory proteins, lacI family YE105_RS19240 PF07690 Major Facilitator Superfamily YE105_RS19245 PF07969 Amidohydrolase family YE105_RS19250 PF01077 Nitrite and sulphite reductase 4Fe-4S domain YE105_RS19250 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain YE105_RS19250 PF07992 Pyridine nucleotide-disulphide oxidoreductase YE105_RS19250 PF18267 Rubredoxin NAD+ reductase C-terminal domain YE105_RS19250 PF04324 BFD-like [2Fe-2S] binding domain YE105_RS19255 PF13806 Rieske-like [2Fe-2S] domain YE105_RS19260 PF01226 Formate/nitrite transporter YE105_RS19265 PF10414 Sirohaem synthase dimerisation region YE105_RS19265 PF14824 Sirohaem biosynthesis protein central YE105_RS19265 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YE105_RS19270 PF00579 tRNA synthetases class I (W and Y) YE105_RS19275 PF13419 Haloacid dehalogenase-like hydrolase YE105_RS19280 PF00834 Ribulose-phosphate 3 epimerase family YE105_RS19285 PF02086 D12 class N6 adenine-specific DNA methyltransferase YE105_RS19290 PF05036 Sporulation related domain YE105_RS19295 PF01761 3-dehydroquinate synthase YE105_RS19300 PF01202 Shikimate kinase YE105_RS19305 PF00263 Bacterial type II and III secretion system protein YE105_RS19305 PF03958 Bacterial type II/III secretion system short domain YE105_RS19330 PF00905 Penicillin binding protein transpeptidase domain YE105_RS19330 PF00912 Transglycosylase YE105_RS19330 PF17092 Penicillin-binding protein OB-like domain YE105_RS19335 PF00293 NUDIX domain YE105_RS19340 PF07095 Intracellular growth attenuator protein IgaA YE105_RS19345 PF13419 Haloacid dehalogenase-like hydrolase YE105_RS19350 PF01479 S4 domain YE105_RS19355 PF01430 Hsp33 protein YE105_RS19360 PF01293 Phosphoenolpyruvate carboxykinase YE105_RS19365 PF00512 His Kinase A (phospho-acceptor) domain YE105_RS19365 PF00672 HAMP domain YE105_RS19365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YE105_RS19370 PF00072 Response regulator receiver domain YE105_RS19370 PF00486 Transcriptional regulatory protein, C terminal YE105_RS19375 PF01272 Transcription elongation factor, GreA/GreB, C-term YE105_RS19375 PF03449 Transcription elongation factor, N-terminal YE105_RS19400 PF17674 HHH domain YE105_RS19400 PF00575 S1 RNA binding domain YE105_RS19400 PF09371 Tex-like protein N-terminal domain YE105_RS19400 PF16921 Tex protein YqgF-like domain YE105_RS19405 PF04023 FeoA domain YE105_RS19410 PF02421 Ferrous iron transport protein B YE105_RS19410 PF17910 FeoB cytosolic helical domain YE105_RS19410 PF07664 Ferrous iron transport protein B C terminus YE105_RS19410 PF07670 Nucleoside recognition YE105_RS19415 PF09012 FeoC like transcriptional regulator YE105_RS19420 PF07338 Protein of unknown function (DUF1471) YE105_RS19425 PF00561 alpha/beta hydrolase fold YE105_RS19430 PF00156 Phosphoribosyl transferase domain YE105_RS19435 PF01106 NifU-like domain YE105_RS19435 PF01521 Iron-sulphur cluster biosynthesis YE105_RS19450 PF02446 4-alpha-glucanotransferase YE105_RS19455 PF00343 Carbohydrate phosphorylase YE105_RS19460 PF00196 Bacterial regulatory proteins, luxR family YE105_RS19460 PF17874 MalT-like TPR region YE105_RS19470 PF00581 Rhodanese-like domain YE105_RS19475 PF01694 Rhomboid family YE105_RS19475 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease YE105_RS19480 PF00455 DeoR C terminal sensor domain YE105_RS19480 PF08220 DeoR-like helix-turn-helix domain YE105_RS19490 PF01266 FAD dependent oxidoreductase YE105_RS19490 PF16901 C-terminal domain of alpha-glycerophosphate oxidase YE105_RS19495 PF00343 Carbohydrate phosphorylase YE105_RS19500 PF08323 Starch synthase catalytic domain YE105_RS19500 PF00534 Glycosyl transferases group 1 YE105_RS19505 PF00483 Nucleotidyl transferase YE105_RS19510 PF00128 Alpha amylase, catalytic domain YE105_RS19510 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) YE105_RS19510 PF18390 Glycogen debranching enzyme C-terminal domain YE105_RS19515 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) YE105_RS19515 PF00128 Alpha amylase, catalytic domain YE105_RS19515 PF02806 Alpha amylase, C-terminal all-beta domain YE105_RS19520 PF07694 5TMR of 5TMR-LYT YE105_RS19520 PF06580 Histidine kinase YE105_RS19525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YE105_RS19525 PF03466 LysR substrate binding domain YE105_RS19530 PF03306 Alpha-acetolactate decarboxylase YE105_RS19535 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YE105_RS19535 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YE105_RS19535 PF00205 Thiamine pyrophosphate enzyme, central domain YE105_RS19540 PF02774 Semialdehyde dehydrogenase, dimerisation domain YE105_RS19540 PF01118 Semialdehyde dehydrogenase, NAD binding domain YE105_RS19545 PF01914 MarC family integral membrane protein YE105_RS19550 PF01202 Shikimate kinase YE105_RS19555 PF02447 GntP family permease YE105_RS19560 PF00356 Bacterial regulatory proteins, lacI family YE105_RS19560 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family YE105_RS19565 PF02678 Pirin YE105_RS19565 PF17954 Quercetinase C-terminal cupin domain YE105_RS19570 PF00583 Acetyltransferase (GNAT) family YE105_RS19575 PF01261 Xylose isomerase-like TIM barrel YE105_RS19580 PF02894 Oxidoreductase family, C-terminal alpha/beta domain YE105_RS19580 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YE105_RS19585 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YE105_RS19585 PF00205 Thiamine pyrophosphate enzyme, central domain YE105_RS19585 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YE105_RS19590 PF00294 pfkB family carbohydrate kinase YE105_RS19600 PF04962 KduI/IolB family YE105_RS19605 PF00171 Aldehyde dehydrogenase family YE105_RS19610 PF07690 Major Facilitator Superfamily YE105_RS19615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YE105_RS19615 PF03466 LysR substrate binding domain YE105_RS19630 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP YE105_RS19635 PF05681 Fumarate hydratase (Fumerase) YE105_RS19635 PF05683 Fumarase C-terminus YE105_RS19640 PF03466 LysR substrate binding domain YE105_RS19640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YE105_RS19645 PF10414 Sirohaem synthase dimerisation region YE105_RS19645 PF14824 Sirohaem biosynthesis protein central YE105_RS19645 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YE105_RS19650 PF00288 GHMP kinases N terminal domain YE105_RS19655 PF02310 B12 binding domain YE105_RS19660 PF13941 MutL protein YE105_RS19665 PF06368 Methylaspartate mutase E chain (MutE) YE105_RS19670 PF07476 Methylaspartate ammonia-lyase C-terminus YE105_RS19670 PF05034 Methylaspartate ammonia-lyase N-terminus YE105_RS19685 PF00375 Sodium:dicarboxylate symporter family YE105_RS19695 PF01384 Phosphate transporter family YE105_RS19700 PF10625 Universal stress protein B (UspB) YE105_RS19705 PF00582 Universal stress protein family YE105_RS19710 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain YE105_RS19710 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase YE105_RS19715 PF00413 Matrixin YE105_RS19715 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) YE105_RS19715 PF08548 Peptidase M10 serralysin C terminal YE105_RS19720 PF04445 Putative SAM-dependent methyltransferase YE105_RS19725 PF01432 Peptidase family M3 YE105_RS19730 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ YE105_RS19735 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YE105_RS19735 PF07992 Pyridine nucleotide-disulphide oxidoreductase YE105_RS19740 PF03797 Autotransporter beta-domain YE105_RS19745 PF03631 Virulence factor BrkB YE105_RS19750 PF02611 CDP-diacylglycerol pyrophosphatase YE105_RS19755 PF05170 AsmA family YE105_RS19760 PF00563 EAL domain YE105_RS19765 PF01361 Tautomerase enzyme YE105_RS19770 PF00294 pfkB family carbohydrate kinase YE105_RS19775 PF00675 Insulinase (Peptidase family M16) YE105_RS19775 PF05193 Peptidase M16 inactive domain YE105_RS19780 PF00375 Sodium:dicarboxylate symporter family YE105_RS19790 PF06917 Periplasmic pectate lyase YE105_RS19795 PF06178 Oligogalacturonate-specific porin protein (KdgM) YE105_RS19800 PF17154 Gammaproteobacterial periplasmic sensor domain YE105_RS19800 PF00990 Diguanylate cyclase, GGDEF domain YE105_RS19800 PF00672 HAMP domain YE105_RS19800 PF00563 EAL domain YE105_RS19810 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) YE105_RS19815 PF01270 Glycosyl hydrolases family 8 YE105_RS19820 PF03170 Bacterial cellulose synthase subunit YE105_RS19825 PF03552 Cellulose synthase YE105_RS19825 PF07238 PilZ domain YE105_RS19825 PF00535 Glycosyl transferase family 2 YE105_RS19830 PF06564 Cellulose biosynthesis protein BcsQ YE105_RS19840 PF10995 Cellulose biosynthesis GIL YE105_RS19845 PF11120 Cellulose biosynthesis protein BcsF YE105_RS19850 PF11658 Cellulose biosynthesis protein BcsG YE105_RS19855 PF00005 ABC transporter YE105_RS19855 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YE105_RS19860 PF00005 ABC transporter YE105_RS19860 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YE105_RS19865 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS19865 PF12911 N-terminal TM domain of oligopeptide transport permease C YE105_RS19870 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS19875 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YE105_RS19885 PF02566 OsmC-like protein YE105_RS19890 PF00884 Sulfatase YE105_RS19890 PF08019 Phosphoethanolamine transferase EptA/EptB YE105_RS19895 PF00196 Bacterial regulatory proteins, luxR family YE105_RS19895 PF00072 Response regulator receiver domain YE105_RS19900 PF05231 MASE1 YE105_RS19900 PF07730 Histidine kinase YE105_RS19900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YE105_RS19905 PF07690 Major Facilitator Superfamily YE105_RS19920 PF08479 POTRA domain, ShlB-type YE105_RS19920 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB YE105_RS19920 PF17287 POTRA domain YE105_RS19925 PF04829 Pre-toxin domain with VENN motif YE105_RS19925 PF13018 Extended Signal Peptide of Type V secretion system YE105_RS19925 PF13332 Hemagglutinin repeat YE105_RS19925 PF05860 haemagglutination activity domain YE105_RS19930 PF12146 Serine aminopeptidase, S33 YE105_RS19935 PF00872 Transposase, Mutator family YE105_RS19940 PF06755 CbtA_toxin of type IV toxin-antitoxin system YE105_RS19960 PF00356 Bacterial regulatory proteins, lacI family YE105_RS19965 PF00480 ROK family YE105_RS19970 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit YE105_RS19975 PF02378 Phosphotransferase system, EIIC YE105_RS19980 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit YE105_RS19985 PF02378 Phosphotransferase system, EIIC YE105_RS20000 PF00232 Glycosyl hydrolase family 1 YE105_RS20005 PF01238 Phosphomannose isomerase type I YE105_RS20010 PF13953 PapC C-terminal domain YE105_RS20010 PF13954 PapC N-terminal domain YE105_RS20010 PF00577 Outer membrane usher protein YE105_RS20020 PF17391 Urocanase N-terminal domain YE105_RS20020 PF17392 Urocanase C-terminal domain YE105_RS20020 PF01175 Urocanase Rossmann-like domain YE105_RS20025 PF00221 Aromatic amino acid lyase YE105_RS20030 PF00324 Amino acid permease YE105_RS20035 PF01695 IstB-like ATP binding protein YE105_RS20040 PF00665 Integrase core domain YE105_RS20060 PF14659 Phage integrase, N-terminal SAM-like domain YE105_RS20060 PF13356 Arm DNA-binding domain YE105_RS20060 PF00589 Phage integrase family YE105_RS20065 PF12833 Helix-turn-helix domain YE105_RS20070 PF02653 Branched-chain amino acid transport system / permease component YE105_RS20075 PF00005 ABC transporter YE105_RS20080 PF13407 Periplasmic binding protein domain YE105_RS20090 PF00370 FGGY family of carbohydrate kinases, N-terminal domain YE105_RS20090 PF02782 FGGY family of carbohydrate kinases, C-terminal domain YE105_RS20095 PF02753 Pili assembly chaperone PapD, C-terminal domain YE105_RS20095 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain YE105_RS20110 PF01757 Acyltransferase family YE105_RS20115 PF07690 Major Facilitator Superfamily YE105_RS20120 PF03144 Elongation factor Tu domain 2 YE105_RS20120 PF09106 Elongation factor SelB, winged helix YE105_RS20120 PF09107 Elongation factor SelB, winged helix YE105_RS20120 PF00009 Elongation factor Tu GTP binding domain YE105_RS20125 PF03841 L-seryl-tRNA selenium transferase YE105_RS20125 PF12390 Selenocysteine synthase N terminal YE105_RS20130 PF04216 Protein involved in formate dehydrogenase formation YE105_RS20135 PF01292 Prokaryotic cytochrome b561 YE105_RS20140 PF13247 4Fe-4S dicluster domain YE105_RS20140 PF09163 Formate dehydrogenase N, transmembrane YE105_RS20145 PF04879 Molybdopterin oxidoreductase Fe4S4 domain YE105_RS20145 PF00384 Molybdopterin oxidoreductase YE105_RS20145 PF01568 Molydopterin dinucleotide binding domain YE105_RS20150 PF01568 Molydopterin dinucleotide binding domain YE105_RS20150 PF00384 Molybdopterin oxidoreductase YE105_RS20150 PF04879 Molybdopterin oxidoreductase Fe4S4 domain YE105_RS20155 PF02634 FdhD/NarQ family YE105_RS20160 PF02777 Iron/manganese superoxide dismutases, C-terminal domain YE105_RS20160 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain YE105_RS20165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YE105_RS20165 PF02203 Tar ligand binding domain homologue YE105_RS20165 PF00672 HAMP domain YE105_RS20170 PF03473 MOSC domain YE105_RS20170 PF03475 3-alpha domain YE105_RS20175 PF01850 PIN domain YE105_RS20180 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin YE105_RS20185 PF10928 Protein of unknown function (DUF2810) YE105_RS20190 PF00392 Bacterial regulatory proteins, gntR family YE105_RS20190 PF00155 Aminotransferase class I and II YE105_RS20200 PF05068 Mannitol repressor YE105_RS20205 PF08125 Mannitol dehydrogenase C-terminal domain YE105_RS20205 PF01232 Mannitol dehydrogenase Rossmann domain YE105_RS20210 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit YE105_RS20210 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YE105_RS20210 PF02378 Phosphotransferase system, EIIC YE105_RS20215 PF11254 Protein of unknown function (DUF3053) YE105_RS20220 PF02092 Glycyl-tRNA synthetase beta subunit YE105_RS20220 PF05746 DALR anticodon binding domain YE105_RS20225 PF02091 Glycyl-tRNA synthetase alpha subunit YE105_RS20230 PF03352 Methyladenine glycosylase YE105_RS20235 PF00583 Acetyltransferase (GNAT) family YE105_RS20260 PF07690 Major Facilitator Superfamily YE105_RS20265 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YE105_RS20265 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YE105_RS20270 PF00128 Alpha amylase, catalytic domain YE105_RS20275 PF00155 Aminotransferase class I and II YE105_RS20280 PF06826 Predicted Permease Membrane Region YE105_RS20280 PF02080 TrkA-C domain YE105_RS20295 PF00011 Hsp20/alpha crystallin family YE105_RS20300 PF00011 Hsp20/alpha crystallin family YE105_RS20305 PF07119 Protein of unknown function (DUF1375) YE105_RS20310 PF07676 WD40-like Beta Propeller Repeat YE105_RS20310 PF12566 Protein of unknown function (DUF3748) YE105_RS20315 PF00291 Pyridoxal-phosphate dependent enzyme YE105_RS20320 PF02423 Ornithine cyclodeaminase/mu-crystallin family YE105_RS20330 PF00986 DNA gyrase B subunit, carboxyl terminus YE105_RS20330 PF18053 DNA gyrase B subunit insert domain YE105_RS20330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YE105_RS20330 PF00204 DNA gyrase B YE105_RS20330 PF01751 Toprim domain YE105_RS20335 PF02463 RecF/RecN/SMC N terminal domain YE105_RS20340 PF00712 DNA polymerase III beta subunit, N-terminal domain YE105_RS20340 PF02767 DNA polymerase III beta subunit, central domain YE105_RS20340 PF02768 DNA polymerase III beta subunit, C-terminal domain YE105_RS20345 PF11638 DnaA N-terminal domain YE105_RS20345 PF08299 Bacterial dnaA protein helix-turn-helix YE105_RS20345 PF00308 Bacterial dnaA protein YE105_RS20350 PF00468 Ribosomal protein L34 YE105_RS20355 PF00825 Ribonuclease P YE105_RS20360 PF01809 Putative membrane protein insertion efficiency factor YE105_RS20365 PF14849 YidC periplasmic domain YE105_RS20365 PF02096 60Kd inner membrane protein YE105_RS20370 PF12631 MnmE helical domain YE105_RS20370 PF10396 GTP-binding protein TrmE N-terminus YE105_RS20370 PF01926 50S ribosome-binding GTPase YE105_RS20375 PF12241 Trans-2-enoyl-CoA reductase catalytic region YE105_RS20375 PF07055 Enoyl reductase FAD binding domain YE105_RS20375 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase YE105_RS20385 PF00005 ABC transporter YE105_RS20385 PF09383 NIL domain YE105_RS20390 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS20395 PF00672 HAMP domain YE105_RS20395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YE105_RS20395 PF02203 Tar ligand binding domain homologue YE105_RS20400 PF03358 NADPH-dependent FMN reductase YE105_RS20405 PF00512 His Kinase A (phospho-acceptor) domain YE105_RS20405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YE105_RS20420 PF00860 Permease family YE105_RS20425 PF13419 Haloacid dehalogenase-like hydrolase YE105_RS20430 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS20435 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS20440 PF00497 Bacterial extracellular solute-binding proteins, family 3 YE105_RS20450 PF01895 PhoU domain YE105_RS20455 PF00005 ABC transporter YE105_RS20460 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS20465 PF00528 Binding-protein-dependent transport system inner membrane component YE105_RS20470 PF12849 PBP superfamily domain YE105_RS20480 PF01380 SIS domain YE105_RS20485 PF12804 MobA-like NTP transferase domain YE105_RS20485 PF00132 Bacterial transferase hexapeptide (six repeats) YE105_RS20490 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain YE105_RS20490 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain YE105_RS20495 PF02874 ATP synthase alpha/beta family, beta-barrel domain YE105_RS20495 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain YE105_RS20500 PF00231 ATP synthase YE105_RS20505 PF00306 ATP synthase alpha/beta chain, C terminal domain YE105_RS20505 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain YE105_RS20505 PF02874 ATP synthase alpha/beta family, beta-barrel domain YE105_RS20510 PF00213 ATP synthase delta (OSCP) subunit YE105_RS20515 PF00430 ATP synthase B/B' CF(0) YE105_RS20520 PF00137 ATP synthase subunit C YE105_RS20525 PF00119 ATP synthase A chain YE105_RS20530 PF03899 ATP synthase I chain YE105_RS20535 PF02527 rRNA small subunit methyltransferase G YE105_RS20540 PF01134 Glucose inhibited division protein A YE105_RS20540 PF13932 GidA associated domain YE105_RS20590 PF07728 AAA domain (dynein-related subfamily) YE105_RS20590 PF12592 Protein of unknown function (DUF3763) YE105_RS20590 PF17868 AAA lid domain YE105_RS20660 PF07690 Major Facilitator Superfamily YE105_RS20740 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain YE105_RS20740 PF00476 DNA polymerase family A YE105_RS20740 PF01612 3'-5' exonuclease YE105_RS20740 PF01367 5'-3' exonuclease, C-terminal SAM fold YE105_RS20745 PF01612 3'-5' exonuclease YE105_RS20745 PF00476 DNA polymerase family A YE105_RS20745 PF01367 5'-3' exonuclease, C-terminal SAM fold YE105_RS20745 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain YE105_RS20755 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain YE105_RS20755 PF01367 5'-3' exonuclease, C-terminal SAM fold YE105_RS20755 PF01612 3'-5' exonuclease YE105_RS20755 PF00476 DNA polymerase family A YE105_RS20910 PF17191 RecG wedge domain YE105_RS20910 PF00271 Helicase conserved C-terminal domain YE105_RS20910 PF00270 DEAD/DEAH box helicase YE105_RS20955 PF01653 NAD-dependent DNA ligase adenylation domain YE105_RS20955 PF03120 NAD-dependent DNA ligase OB-fold domain YE105_RS21005 PF13276 HTH-like domain YE105_RS21005 PF00665 Integrase core domain YE105_RS21005 PF13333 Integrase core domain YE105_RS21025 PF13333 Integrase core domain YE105_RS21025 PF00665 Integrase core domain YE105_RS21025 PF13276 HTH-like domain YE105_RS21075 PF13018 Extended Signal Peptide of Type V secretion system YE105_RS21075 PF02661 Fic/DOC family YE105_RS21075 PF13332 Hemagglutinin repeat YE105_RS21075 PF03543 Yersinia/Haemophilus virulence surface antigen YE105_RS21075 PF05860 haemagglutination activity domain