AW19_RS00340	SM00822	AW19_RS00340
AW19_RS00345	SM00062	Bacterial periplasmic substrate-binding proteins
AW19_RS00350	SM01235	AW19_RS00350
AW19_RS00360	SM00838	Elongation factor G C-terminus
AW19_RS00360	SM00889	Elongation factor G, domain IV
AW19_RS00365	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AW19_RS00410	SM01012	AW19_RS00410
AW19_RS00425	SM00382	ATPases associated with a variety of cellular activities
AW19_RS00455	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AW19_RS00485	SM00382	ATPases associated with a variety of cellular activities
AW19_RS00495	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AW19_RS00545	SM01091	Transporter associated domain
AW19_RS00555	SM00382	ATPases associated with a variety of cellular activities
AW19_RS00555	SM00962	SRP54-type protein, GTPase domain
AW19_RS00555	SM00963	SRP54-type protein, helical bundle domain
AW19_RS00590	SM00448	cheY-homologous receiver domain
AW19_RS00590	SM00850	LytTr DNA-binding domain
AW19_RS00600	SM00830	Chorismate mutase type II
AW19_RS00605	SM00830	Chorismate mutase type II
AW19_RS00620	SM00363	S4 RNA-binding domain
AW19_RS00630	SM00382	ATPases associated with a variety of cellular activities
AW19_RS00630	SM01086	C-terminal, D2-small domain, of ClpB protein
AW19_RS00690	SM00257	Lysin motif
AW19_RS00695	SM00849	Metallo-beta-lactamase superfamily
AW19_RS00710	SM00479	AW19_RS00710
AW19_RS00730	SM00382	ATPases associated with a variety of cellular activities
AW19_RS00760	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AW19_RS00800	SM00357	Cold shock protein domain
AW19_RS00805	SM00342	helix_turn_helix, arabinose operon control protein
AW19_RS00810	SM00450	Rhodanese Homology Domain
AW19_RS00835	SM00382	ATPases associated with a variety of cellular activities
AW19_RS00840	SM00382	ATPases associated with a variety of cellular activities
AW19_RS00865	SM00988	UreE urease accessory protein, N-terminal domain
AW19_RS00945	SM00342	helix_turn_helix, arabinose operon control protein
AW19_RS01025	SM00953	AW19_RS01025
AW19_RS01075	SM00986	Uracil DNA glycosylase superfamily
AW19_RS01075	SM00987	UreE urease accessory protein, C-terminal domain 
AW19_RS01085	SM00487	DEAD-like helicases superfamily
AW19_RS01085	SM00490	helicase superfamily c-terminal domain
AW19_RS01125	SM00838	Elongation factor G C-terminus
AW19_RS01135	SM00358	Double-stranded RNA binding motif
AW19_RS01135	SM00535	Ribonuclease III family
AW19_RS01175	SM00421	helix_turn_helix, Lux Regulon
AW19_RS01205	SM00062	Bacterial periplasmic substrate-binding proteins
AW19_RS01210	SM01211	AW19_RS01210
AW19_RS01220	SM00387	Histidine kinase-like ATPases
AW19_RS01220	SM00388	His Kinase A (phosphoacceptor) domain
AW19_RS01230	SM00382	ATPases associated with a variety of cellular activities
AW19_RS01230	SM00448	cheY-homologous receiver domain
AW19_RS01240	SM00938	Nitrogen regulatory protein P-II
AW19_RS01315	SM00271	DnaJ molecular chaperone homology domain
AW19_RS01350	SM01359	AW19_RS01350
AW19_RS01350	SM01360	AW19_RS01350
AW19_RS01360	SM00247	Beta/gamma crystallins
AW19_RS01365	SM00562	AW19_RS01365
AW19_RS01375	SM00028	Tetratricopeptide repeats
AW19_RS01380	SM00530	Helix-turn-helix XRE-family like proteins 
AW19_RS01405	SM00564	beta-propeller repeat
AW19_RS01430	SM00116	Domain in cystathionine beta-synthase and other proteins.
AW19_RS01430	SM01240	AW19_RS01430
AW19_RS01495	SM00530	Helix-turn-helix XRE-family like proteins 
AW19_RS01740	SM00116	Domain in cystathionine beta-synthase and other proteins.
AW19_RS01745	SM00420	helix_turn_helix, Deoxyribose operon repressor
AW19_RS01745	SM01134	AW19_RS01745
AW19_RS01775	SM00046	Diacylglycerol kinase catalytic domain (presumed)
AW19_RS01790	SM00448	cheY-homologous receiver domain
AW19_RS01790	SM00862	Transcriptional regulatory protein, C terminal
AW19_RS01795	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AW19_RS01795	SM00387	Histidine kinase-like ATPases
AW19_RS01795	SM00388	His Kinase A (phosphoacceptor) domain
AW19_RS01825	SM00052	Putative diguanylate phosphodiesterase
AW19_RS01825	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AW19_RS01825	SM00091	PAS domain
AW19_RS01825	SM00267	diguanylate cyclase
AW19_RS01830	SM00924	MgtE intracellular N domain
AW19_RS01860	SM00382	ATPases associated with a variety of cellular activities
AW19_RS01925	SM01130	AW19_RS01925
AW19_RS02005	SM00382	ATPases associated with a variety of cellular activities
AW19_RS02020	SM00421	helix_turn_helix, Lux Regulon
AW19_RS02020	SM00448	cheY-homologous receiver domain
AW19_RS02035	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AW19_RS02065	SM00919	Malic enzyme, NAD binding domain
AW19_RS02065	SM01274	AW19_RS02065
AW19_RS02100	SM01130	AW19_RS02100
AW19_RS02145	SM00382	ATPases associated with a variety of cellular activities
AW19_RS02155	SM00448	cheY-homologous receiver domain
AW19_RS02155	SM00862	Transcriptional regulatory protein, C terminal
AW19_RS02160	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AW19_RS02160	SM00387	Histidine kinase-like ATPases
AW19_RS02160	SM00388	His Kinase A (phosphoacceptor) domain
AW19_RS02190	SM00771	ZipA, C-terminal domain (FtsZ-binding)
AW19_RS02195	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AW19_RS02195	SM00292	breast cancer carboxy-terminal domain
AW19_RS02195	SM00532	Ligase N family
AW19_RS02295	SM00448	cheY-homologous receiver domain
AW19_RS02295	SM00850	LytTr DNA-binding domain
AW19_RS02300	SM00387	Histidine kinase-like ATPases
AW19_RS02370	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AW19_RS02385	SM00382	ATPases associated with a variety of cellular activities
AW19_RS02430	SM00382	ATPases associated with a variety of cellular activities
AW19_RS02450	SM00867	YceI-like domain 
AW19_RS02455	SM00354	helix_turn _helix lactose operon repressor
AW19_RS02490	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
AW19_RS02495	SM00382	ATPases associated with a variety of cellular activities
AW19_RS02520	SM00421	helix_turn_helix, Lux Regulon
AW19_RS02530	SM00357	Cold shock protein domain
AW19_RS02540	SM00267	diguanylate cyclase
AW19_RS02550	SM00729	Elongator protein 3, MiaB family, Radical SAM
AW19_RS02565	SM00936	Penicillin-binding protein 5, C-terminal domain 
AW19_RS02625	SM00382	ATPases associated with a variety of cellular activities
AW19_RS02640	SM00062	Bacterial periplasmic substrate-binding proteins
AW19_RS02655	SM00116	Domain in cystathionine beta-synthase and other proteins.
AW19_RS02655	SM01091	Transporter associated domain
AW19_RS02670	SM00729	Elongator protein 3, MiaB family, Radical SAM
AW19_RS02750	SM01081	Putative carbohydrate binding domain
AW19_RS02765	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AW19_RS02800	SM00448	cheY-homologous receiver domain
AW19_RS02800	SM00862	Transcriptional regulatory protein, C terminal
AW19_RS02805	SM00387	Histidine kinase-like ATPases
AW19_RS02805	SM00388	His Kinase A (phosphoacceptor) domain
AW19_RS02855	SM00796	Allophanate hydrolase subunit 1
AW19_RS02860	SM00797	Allophanate hydrolase subunit 2
AW19_RS02910	SM00861	Transketolase, pyrimidine binding domain
AW19_RS02925	SM00881	CoA binding domain
AW19_RS03030	SM00855	Phosphoglycerate mutase family
AW19_RS03065	SM00382	ATPases associated with a variety of cellular activities
AW19_RS03090	SM00382	ATPases associated with a variety of cellular activities
AW19_RS03110	SM00729	Elongator protein 3, MiaB family, Radical SAM
AW19_RS03110	SM00876	Biotin and Thiamin Synthesis associated domain
AW19_RS03130	SM00382	ATPases associated with a variety of cellular activities
AW19_RS03135	SM00487	DEAD-like helicases superfamily
AW19_RS03135	SM00490	helicase superfamily c-terminal domain
AW19_RS03150	SM00729	Elongator protein 3, MiaB family, Radical SAM
AW19_RS03185	SM00382	ATPases associated with a variety of cellular activities
AW19_RS03205	SM00487	DEAD-like helicases superfamily
AW19_RS03205	SM00490	helicase superfamily c-terminal domain
AW19_RS03240	SM01118	AW19_RS03240
AW19_RS03245	SM00507	HNH nucleases
AW19_RS03260	SM00382	ATPases associated with a variety of cellular activities
AW19_RS03285	SM00450	Rhodanese Homology Domain
AW19_RS03310	SM00382	ATPases associated with a variety of cellular activities
AW19_RS03345	SM00487	DEAD-like helicases superfamily
AW19_RS03345	SM00488	AW19_RS03345
AW19_RS03345	SM00491	AW19_RS03345
AW19_RS03375	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AW19_RS03375	SM00091	PAS domain
AW19_RS03375	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AW19_RS03380	SM00382	ATPases associated with a variety of cellular activities
AW19_RS03390	SM00062	Bacterial periplasmic substrate-binding proteins
AW19_RS03390	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AW19_RS03415	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
AW19_RS03440	SM00382	ATPases associated with a variety of cellular activities
AW19_RS03450	SM00852	Probable molybdopterin binding domain
AW19_RS03470	SM00382	ATPases associated with a variety of cellular activities
AW19_RS03495	SM00829	Enoylreductase
AW19_RS03520	SM00354	helix_turn _helix lactose operon repressor
AW19_RS03530	SM00382	ATPases associated with a variety of cellular activities
AW19_RS03545	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AW19_RS03545	SM00382	ATPases associated with a variety of cellular activities
AW19_RS03550	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AW19_RS03630	SM00919	Malic enzyme, NAD binding domain
AW19_RS03630	SM01274	AW19_RS03630
AW19_RS03700	SM01091	Transporter associated domain
AW19_RS03715	SM01350	AW19_RS03715
AW19_RS03770	SM00382	ATPases associated with a variety of cellular activities
AW19_RS03820	SM00382	ATPases associated with a variety of cellular activities
AW19_RS03855	SM00877	AW19_RS03855
AW19_RS03860	SM00877	AW19_RS03860
AW19_RS03900	SM00877	AW19_RS03900
AW19_RS03905	SM00877	AW19_RS03905
AW19_RS03935	SM00877	AW19_RS03935
AW19_RS03940	SM00877	AW19_RS03940
AW19_RS03950	SM00342	helix_turn_helix, arabinose operon control protein
AW19_RS04030	SM00382	ATPases associated with a variety of cellular activities
AW19_RS04050	SM00855	Phosphoglycerate mutase family
AW19_RS04105	SM00420	helix_turn_helix, Deoxyribose operon repressor
AW19_RS04105	SM01134	AW19_RS04105
AW19_RS04125	SM00260	Two component signalling adaptor domain
AW19_RS04125	SM00448	cheY-homologous receiver domain
AW19_RS04160	SM00062	Bacterial periplasmic substrate-binding proteins
AW19_RS04160	SM00387	Histidine kinase-like ATPases
AW19_RS04160	SM00388	His Kinase A (phosphoacceptor) domain
AW19_RS04160	SM00448	cheY-homologous receiver domain
AW19_RS04165	SM00421	helix_turn_helix, Lux Regulon
AW19_RS04165	SM00448	cheY-homologous receiver domain
AW19_RS04180	SM00829	Enoylreductase
AW19_RS04195	SM00823	Phosphopantetheine attachment site
AW19_RS04215	SM00824	Thioesterase
AW19_RS04235	SM00342	helix_turn_helix, arabinose operon control protein
AW19_RS04260	SM00382	ATPases associated with a variety of cellular activities
AW19_RS04265	SM00382	ATPases associated with a variety of cellular activities
AW19_RS04270	SM00382	ATPases associated with a variety of cellular activities
AW19_RS04285	SM00382	ATPases associated with a variety of cellular activities
AW19_RS04305	SM00387	Histidine kinase-like ATPases
AW19_RS04310	SM00421	helix_turn_helix, Lux Regulon
AW19_RS04310	SM00448	cheY-homologous receiver domain
AW19_RS04315	SM00448	cheY-homologous receiver domain
AW19_RS04320	SM00091	PAS domain
AW19_RS04320	SM00387	Histidine kinase-like ATPases
AW19_RS04325	SM00764	Citrate lyase ligase C-terminal domain
AW19_RS04445	SM00563	Phosphate acyltransferases
AW19_RS04455	SM00195	Dual specificity phosphatase, catalytic domain
AW19_RS04485	SM00344	helix_turn_helix ASNC type
AW19_RS04500	SM00829	Enoylreductase
AW19_RS04505	SM01038	Beta galactosidase small chain
AW19_RS04510	SM00354	helix_turn _helix lactose operon repressor
AW19_RS04515	SM00357	Cold shock protein domain
AW19_RS04525	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AW19_RS04525	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AW19_RS04535	SM00831	Cation transporter/ATPase, N-terminus
AW19_RS04565	SM00073	Histidine Phosphotransfer domain
AW19_RS04565	SM00260	Two component signalling adaptor domain
AW19_RS04565	SM00387	Histidine kinase-like ATPases
AW19_RS04565	SM01231	AW19_RS04565
AW19_RS04570	SM00260	Two component signalling adaptor domain
AW19_RS04575	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AW19_RS04575	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AW19_RS04575	SM00319	Homologues of the ligand binding domain of Tar
AW19_RS04580	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AW19_RS04580	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AW19_RS04580	SM00319	Homologues of the ligand binding domain of Tar
AW19_RS04585	SM00138	Methyltransferase, chemotaxis proteins 
AW19_RS04590	SM00448	cheY-homologous receiver domain
AW19_RS04595	SM00448	cheY-homologous receiver domain
AW19_RS04635	SM00858	AW19_RS04635
AW19_RS04680	SM00047	Lysozyme subfamily 2
AW19_RS04740	SM00382	ATPases associated with a variety of cellular activities
AW19_RS04770	SM00478	endonuclease III
AW19_RS04775	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AW19_RS04780	SM00342	helix_turn_helix, arabinose operon control protein
AW19_RS04820	SM00062	Bacterial periplasmic substrate-binding proteins
AW19_RS04820	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AW19_RS04830	SM00382	ATPases associated with a variety of cellular activities
AW19_RS04885	SM00421	helix_turn_helix, Lux Regulon
AW19_RS04895	SM00530	Helix-turn-helix XRE-family like proteins 
AW19_RS04900	SM00612	AW19_RS04900
AW19_RS04955	SM00642	Alpha-amylase domain
AW19_RS04975	SM00421	helix_turn_helix, Lux Regulon
AW19_RS04975	SM00448	cheY-homologous receiver domain
AW19_RS04980	SM00465	GIY-YIG type nucleases (URI domain)
AW19_RS05030	SM00448	cheY-homologous receiver domain
AW19_RS05035	SM00387	Histidine kinase-like ATPases
AW19_RS05040	SM00420	helix_turn_helix, Deoxyribose operon repressor
AW19_RS05040	SM01134	AW19_RS05040
AW19_RS05050	SM01007	Class II Aldolase and Adducin N-terminal domain
AW19_RS05105	SM00382	ATPases associated with a variety of cellular activities
AW19_RS05195	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AW19_RS05195	SM00387	Histidine kinase-like ATPases
AW19_RS05210	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AW19_RS05255	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AW19_RS05255	SM00866	AW19_RS05255
AW19_RS05275	SM00382	ATPases associated with a variety of cellular activities
AW19_RS05295	SM00257	Lysin motif
AW19_RS05325	SM01400	AW19_RS05325
AW19_RS05345	SM00937	AW19_RS05345
AW19_RS05400	SM00481	DNA polymerase alpha chain like domain
AW19_RS05440	SM00836	DALR anticodon binding domain
AW19_RS05440	SM01016	Arginyl tRNA synthetase N terminal dom
AW19_RS05500	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AW19_RS05505	SM00382	ATPases associated with a variety of cellular activities
AW19_RS05520	SM00382	ATPases associated with a variety of cellular activities
AW19_RS05530	SM00257	Lysin motif
AW19_RS05575	SM00487	DEAD-like helicases superfamily
AW19_RS05575	SM00491	AW19_RS05575
AW19_RS05595	SM00341	Helicase and RNase D C-terminal
AW19_RS05595	SM00474	3'-5' exonuclease
AW19_RS05660	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AW19_RS05675	SM01005	Alanine racemase, C-terminal domain
AW19_RS05685	SM00052	Putative diguanylate phosphodiesterase
AW19_RS05685	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AW19_RS05685	SM00091	PAS domain
AW19_RS05685	SM00267	diguanylate cyclase
AW19_RS05710	SM00763	PrkA AAA domain
AW19_RS05725	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AW19_RS05745	SM00870	AW19_RS05745
AW19_RS05765	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AW19_RS05765	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AW19_RS05765	SM00493	AW19_RS05765
AW19_RS05820	SM00448	cheY-homologous receiver domain
AW19_RS05825	SM00984	UDP binding domain
AW19_RS05830	SM00528	Domain in histone-like proteins of HNS family
AW19_RS05885	SM00382	ATPases associated with a variety of cellular activities
AW19_RS05890	SM00382	ATPases associated with a variety of cellular activities
AW19_RS05900	SM00155	Phospholipase D. Active site motifs.
AW19_RS05905	SM00052	Putative diguanylate phosphodiesterase
AW19_RS05955	SM00749	bacterial OsmY and nodulation domain
AW19_RS05990	SM00481	DNA polymerase alpha chain like domain
AW19_RS06000	SM00869	Autotransporter beta-domain
AW19_RS06005	SM00421	helix_turn_helix, Lux Regulon
AW19_RS06015	SM00634	Bacterial Ig-like domain (group 1)
AW19_RS06030	SM00421	helix_turn_helix, Lux Regulon
AW19_RS06050	SM00857	Resolvase, N terminal domain
AW19_RS06085	SM00363	S4 RNA-binding domain
AW19_RS06100	SM00822	AW19_RS06100
AW19_RS06115	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AW19_RS06115	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AW19_RS06115	SM00493	AW19_RS06115
AW19_RS06145	SM00014	Acid phosphatase homologues
AW19_RS06155	SM00028	Tetratricopeptide repeats
AW19_RS06170	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AW19_RS06185	SM01007	Class II Aldolase and Adducin N-terminal domain
AW19_RS06195	SM00420	helix_turn_helix, Deoxyribose operon repressor
AW19_RS06195	SM01134	AW19_RS06195
AW19_RS06215	SM00357	Cold shock protein domain
AW19_RS06215	SM00955	AW19_RS06215
AW19_RS06240	SM00478	endonuclease III
AW19_RS06240	SM00525	AW19_RS06240
AW19_RS06250	SM00900	AW19_RS06250
AW19_RS06260	SM00342	helix_turn_helix, arabinose operon control protein
AW19_RS06290	SM00382	ATPases associated with a variety of cellular activities
AW19_RS06300	SM00382	ATPases associated with a variety of cellular activities
AW19_RS06335	SM00342	helix_turn_helix, arabinose operon control protein
AW19_RS06370	SM00354	helix_turn _helix lactose operon repressor
AW19_RS06400	SM00421	helix_turn_helix, Lux Regulon
AW19_RS06500	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AW19_RS06555	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AW19_RS06555	SM00382	ATPases associated with a variety of cellular activities
AW19_RS06560	SM00849	Metallo-beta-lactamase superfamily
AW19_RS06575	SM00344	helix_turn_helix ASNC type
AW19_RS06590	SM00062	Bacterial periplasmic substrate-binding proteins
AW19_RS06620	SM00644	AW19_RS06620
AW19_RS06650	SM00098	Alkaline phosphatase homologues
AW19_RS06655	SM00822	AW19_RS06655
AW19_RS06665	SM00871	Bacterial transcription activator, effector binding domain
AW19_RS06685	SM00100	Cyclic nucleotide-monophosphate binding domain
AW19_RS06685	SM00419	helix_turn_helix, cAMP Regulatory protein
AW19_RS06700	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AW19_RS06700	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AW19_RS06725	SM00448	cheY-homologous receiver domain
AW19_RS06725	SM00862	Transcriptional regulatory protein, C terminal
AW19_RS06730	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AW19_RS06730	SM00387	Histidine kinase-like ATPases
AW19_RS06730	SM00388	His Kinase A (phosphoacceptor) domain
AW19_RS06750	SM00020	Trypsin-like serine protease
AW19_RS06755	SM00530	Helix-turn-helix XRE-family like proteins 
AW19_RS06765	SM00382	ATPases associated with a variety of cellular activities
AW19_RS06765	SM00487	DEAD-like helicases superfamily
AW19_RS06765	SM00490	helicase superfamily c-terminal domain
AW19_RS06765	SM00847	Helicase associated domain (HA2)  Add an annotation
AW19_RS06810	SM00890	Domain of unknown function
AW19_RS06815	SM00148	Phospholipase C, catalytic domain (part); domain X
AW19_RS06850	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AW19_RS06860	SM00091	PAS domain
AW19_RS06860	SM00382	ATPases associated with a variety of cellular activities
AW19_RS06870	SM00953	AW19_RS06870
AW19_RS06905	SM00382	ATPases associated with a variety of cellular activities
AW19_RS06935	SM00382	ATPases associated with a variety of cellular activities
AW19_RS06940	SM00382	ATPases associated with a variety of cellular activities
AW19_RS06990	SM00363	S4 RNA-binding domain
AW19_RS07015	SM00347	helix_turn_helix multiple antibiotic resistance protein
AW19_RS07065	SM00479	AW19_RS07065
AW19_RS07085	SM00354	helix_turn _helix lactose operon repressor
AW19_RS07160	SM00382	ATPases associated with a variety of cellular activities
AW19_RS07275	SM00382	ATPases associated with a variety of cellular activities
AW19_RS07300	SM00411	bacterial (prokaryotic) histone like domain
AW19_RS07305	SM00873	B3/4 domain
AW19_RS07305	SM00874	tRNA synthetase B5 domain
AW19_RS07305	SM00896	Ferredoxin-fold anticodon binding domain
AW19_RS07330	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AW19_RS07340	SM00869	Autotransporter beta-domain
AW19_RS07395	SM00382	ATPases associated with a variety of cellular activities
AW19_RS07455	SM00382	ATPases associated with a variety of cellular activities
AW19_RS07480	SM00644	AW19_RS07480
AW19_RS07485	SM00346	helix_turn_helix isocitrate lyase regulation
AW19_RS07510	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AW19_RS07510	SM00245	tail specific protease
AW19_RS07515	SM00945	ProQ/FINO family
AW19_RS07545	SM00972	Spore Coat Protein U domain
AW19_RS07550	SM00972	Spore Coat Protein U domain
AW19_RS07555	SM00972	Spore Coat Protein U domain
AW19_RS07570	SM00972	Spore Coat Protein U domain
AW19_RS07575	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AW19_RS07575	SM00091	PAS domain
AW19_RS07575	SM00267	diguanylate cyclase
AW19_RS07585	SM01022	AW19_RS07585
AW19_RS07635	SM00363	S4 RNA-binding domain
AW19_RS07690	SM00479	AW19_RS07690
AW19_RS07705	SM01022	AW19_RS07705
AW19_RS07715	SM00487	DEAD-like helicases superfamily
AW19_RS07715	SM00490	helicase superfamily c-terminal domain
AW19_RS07745	SM01091	Transporter associated domain
AW19_RS07780	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AW19_RS07780	SM00091	PAS domain
AW19_RS07780	SM00267	diguanylate cyclase
AW19_RS07805	SM00357	Cold shock protein domain
AW19_RS07855	SM00342	helix_turn_helix, arabinose operon control protein
AW19_RS07880	SM00382	ATPases associated with a variety of cellular activities
AW19_RS07885	SM00090	RIO-like kinase
AW19_RS07890	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AW19_RS07890	SM00091	PAS domain
AW19_RS07890	SM00267	diguanylate cyclase
AW19_RS07930	SM00342	helix_turn_helix, arabinose operon control protein
AW19_RS07935	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AW19_RS07940	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AW19_RS07950	SM00354	helix_turn _helix lactose operon repressor
AW19_RS07965	SM01329	AW19_RS07965
AW19_RS08000	SM00448	cheY-homologous receiver domain
AW19_RS08000	SM00862	Transcriptional regulatory protein, C terminal
AW19_RS08005	SM00387	Histidine kinase-like ATPases
AW19_RS08005	SM00388	His Kinase A (phosphoacceptor) domain
AW19_RS08010	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
AW19_RS08035	SM00382	ATPases associated with a variety of cellular activities
AW19_RS08045	SM00487	DEAD-like helicases superfamily
AW19_RS08045	SM00490	helicase superfamily c-terminal domain
AW19_RS08045	SM00982	AW19_RS08045
AW19_RS08045	SM01058	CarD-like/TRCF domain
AW19_RS08110	SM00382	ATPases associated with a variety of cellular activities
AW19_RS08150	SM00825	Beta-ketoacyl synthase
AW19_RS08160	SM00822	AW19_RS08160
AW19_RS08165	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AW19_RS08195	SM00363	S4 RNA-binding domain
AW19_RS08200	SM00316	Ribosomal protein S1-like RNA-binding domain
AW19_RS08235	SM00421	helix_turn_helix, Lux Regulon
AW19_RS08245	SM00450	Rhodanese Homology Domain
AW19_RS08310	SM01091	Transporter associated domain
AW19_RS08315	SM00062	Bacterial periplasmic substrate-binding proteins
AW19_RS08315	SM00448	cheY-homologous receiver domain
AW19_RS08415	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
AW19_RS08420	SM00992	Hemimethylated DNA-binding protein YccV like
AW19_RS08425	SM00881	CoA binding domain
AW19_RS08435	SM00851	MGS-like domain
AW19_RS08490	SM00825	Beta-ketoacyl synthase
AW19_RS08510	SM00382	ATPases associated with a variety of cellular activities
AW19_RS08515	SM00981	AW19_RS08515
AW19_RS08560	SM00052	Putative diguanylate phosphodiesterase
AW19_RS08565	SM00849	Metallo-beta-lactamase superfamily
AW19_RS08620	SM00357	Cold shock protein domain
AW19_RS08625	SM01150	AW19_RS08625
AW19_RS08635	SM00382	ATPases associated with a variety of cellular activities
AW19_RS08640	SM00849	Metallo-beta-lactamase superfamily
AW19_RS08645	SM00411	bacterial (prokaryotic) histone like domain
AW19_RS08650	SM00316	Ribosomal protein S1-like RNA-binding domain
AW19_RS08675	SM00870	AW19_RS08675
AW19_RS08710	SM00382	ATPases associated with a variety of cellular activities
AW19_RS08720	SM00843	AW19_RS08720
AW19_RS08725	SM00344	helix_turn_helix ASNC type
AW19_RS08735	SM00382	ATPases associated with a variety of cellular activities
AW19_RS08740	SM00382	ATPases associated with a variety of cellular activities
AW19_RS08750	SM00316	Ribosomal protein S1-like RNA-binding domain
AW19_RS08755	SM00382	ATPases associated with a variety of cellular activities
AW19_RS08755	SM01086	C-terminal, D2-small domain, of ClpB protein
AW19_RS08765	SM00357	Cold shock protein domain
AW19_RS08770	SM00382	ATPases associated with a variety of cellular activities
AW19_RS08835	SM00382	ATPases associated with a variety of cellular activities
AW19_RS08840	SM00062	Bacterial periplasmic substrate-binding proteins
AW19_RS08840	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AW19_RS08860	SM00062	Bacterial periplasmic substrate-binding proteins
AW19_RS08860	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AW19_RS08885	SM00382	ATPases associated with a variety of cellular activities
AW19_RS08920	SM00014	Acid phosphatase homologues
AW19_RS08925	SM01133	AW19_RS08925
AW19_RS08930	SM00420	helix_turn_helix, Deoxyribose operon repressor
AW19_RS08930	SM01134	AW19_RS08930
AW19_RS08945	SM00936	Penicillin-binding protein 5, C-terminal domain 
AW19_RS08950	SM00116	Domain in cystathionine beta-synthase and other proteins.
AW19_RS08960	SM00530	Helix-turn-helix XRE-family like proteins 
AW19_RS08975	SM00382	ATPases associated with a variety of cellular activities
AW19_RS08975	SM00930	AW19_RS08975
AW19_RS09040	SM00518	AP endonuclease family 2
AW19_RS09080	SM00841	Elongation factor P, C-terminal
AW19_RS09080	SM01185	AW19_RS09080
AW19_RS09095	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AW19_RS09095	SM00895	AW19_RS09095
AW19_RS09105	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AW19_RS09130	SM00052	Putative diguanylate phosphodiesterase
AW19_RS09150	SM00382	ATPases associated with a variety of cellular activities
AW19_RS09170	SM00363	S4 RNA-binding domain
AW19_RS09175	SM00487	DEAD-like helicases superfamily
AW19_RS09175	SM00490	helicase superfamily c-terminal domain
AW19_RS09235	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AW19_RS09235	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AW19_RS09275	SM00382	ATPases associated with a variety of cellular activities
AW19_RS09285	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
AW19_RS09295	SM00387	Histidine kinase-like ATPases
AW19_RS09295	SM00388	His Kinase A (phosphoacceptor) domain
AW19_RS09300	SM00421	helix_turn_helix, Lux Regulon
AW19_RS09300	SM00448	cheY-homologous receiver domain
AW19_RS09305	SM00387	Histidine kinase-like ATPases
AW19_RS09305	SM00388	His Kinase A (phosphoacceptor) domain
AW19_RS09305	SM00448	cheY-homologous receiver domain
AW19_RS09310	SM00434	DNA Topoisomerase IV
AW19_RS09340	SM00852	Probable molybdopterin binding domain
AW19_RS09355	SM01060	AW19_RS09355
AW19_RS09365	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AW19_RS09390	SM00869	Autotransporter beta-domain
AW19_RS09420	SM00354	helix_turn _helix lactose operon repressor
AW19_RS09485	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AW19_RS09485	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
AW19_RS09490	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
AW19_RS09525	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AW19_RS09565	SM00354	helix_turn _helix lactose operon repressor
AW19_RS09595	SM00052	Putative diguanylate phosphodiesterase
AW19_RS09605	SM00382	ATPases associated with a variety of cellular activities
AW19_RS09620	SM00062	Bacterial periplasmic substrate-binding proteins
AW19_RS09665	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AW19_RS09675	SM00342	helix_turn_helix, arabinose operon control protein
AW19_RS09690	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AW19_RS09730	SM00354	helix_turn _helix lactose operon repressor
AW19_RS09765	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AW19_RS09765	SM00091	PAS domain
AW19_RS09765	SM00267	diguanylate cyclase
AW19_RS09770	SM00825	Beta-ketoacyl synthase
AW19_RS09810	SM00463	Small MutS-related domain
AW19_RS09885	SM00382	ATPases associated with a variety of cellular activities
AW19_RS09980	SM00635	Bacterial Ig-like domain 2
AW19_RS10130	SM00382	ATPases associated with a variety of cellular activities
AW19_RS10155	SM00530	Helix-turn-helix XRE-family like proteins 
AW19_RS10285	SM00840	AW19_RS10285
AW19_RS10300	SM01001	AIR carboxylase
AW19_RS10315	SM00382	ATPases associated with a variety of cellular activities
AW19_RS10325	SM00822	AW19_RS10325
AW19_RS10335	SM00244	prohibitin homologues
AW19_RS10345	SM00422	helix_turn_helix, mercury resistance
AW19_RS10440	SM00387	Histidine kinase-like ATPases
AW19_RS10445	SM00493	AW19_RS10445
AW19_RS10455	SM00382	ATPases associated with a variety of cellular activities
AW19_RS10550	SM00382	ATPases associated with a variety of cellular activities
AW19_RS10590	SM00938	Nitrogen regulatory protein P-II
AW19_RS10595	SM00382	ATPases associated with a variety of cellular activities
AW19_RS10600	SM00382	ATPases associated with a variety of cellular activities
AW19_RS10605	SM00344	helix_turn_helix ASNC type
AW19_RS10635	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AW19_RS10645	SM00411	bacterial (prokaryotic) histone like domain
AW19_RS10650	SM00382	ATPases associated with a variety of cellular activities
AW19_RS10650	SM00464	Found in ATP-dependent protease La (LON)
AW19_RS10655	SM00382	ATPases associated with a variety of cellular activities
AW19_RS10655	SM00994	ClpX C4-type zinc finger
AW19_RS10655	SM01086	C-terminal, D2-small domain, of ClpB protein
AW19_RS10735	SM00981	AW19_RS10735
AW19_RS10750	SM00861	Transketolase, pyrimidine binding domain
AW19_RS10800	SM01323	AW19_RS10800
AW19_RS10825	SM00869	Autotransporter beta-domain
AW19_RS10855	SM00642	Alpha-amylase domain
AW19_RS10875	SM00091	PAS domain
AW19_RS10875	SM00387	Histidine kinase-like ATPases
AW19_RS10875	SM00388	His Kinase A (phosphoacceptor) domain
AW19_RS10880	SM00448	cheY-homologous receiver domain
AW19_RS10880	SM00862	Transcriptional regulatory protein, C terminal
AW19_RS10945	SM01068	Putative carbohydrate binding domain
AW19_RS10965	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AW19_RS10965	SM00866	AW19_RS10965
AW19_RS10990	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
AW19_RS11140	SM00900	AW19_RS11140
AW19_RS11195	SM01007	Class II Aldolase and Adducin N-terminal domain
AW19_RS11225	SM00347	helix_turn_helix multiple antibiotic resistance protein
AW19_RS11240	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AW19_RS11250	SM01144	AW19_RS11250
AW19_RS11255	SM00881	CoA binding domain
AW19_RS11260	SM00155	Phospholipase D. Active site motifs.
AW19_RS11300	SM00382	ATPases associated with a variety of cellular activities
AW19_RS11300	SM00930	AW19_RS11300
AW19_RS11340	SM01322	AW19_RS11340
AW19_RS11360	SM00977	TilS substrate C-terminal domain
AW19_RS11385	SM00481	DNA polymerase alpha chain like domain
AW19_RS11415	SM00935	Outer membrane protein (OmpH-like)
AW19_RS11425	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AW19_RS11470	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AW19_RS11515	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AW19_RS11515	SM00475	5'-3' exonuclease
AW19_RS11555	SM00925	MltA specific insert domain
AW19_RS11575	SM00646	AW19_RS11575
AW19_RS11585	SM00382	ATPases associated with a variety of cellular activities
AW19_RS11635	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AW19_RS11650	SM00927	DNA mismatch repair enzyme MutH
AW19_RS11670	SM00563	Phosphate acyltransferases
AW19_RS11680	SM00354	helix_turn _helix lactose operon repressor
AW19_RS11705	SM00849	Metallo-beta-lactamase superfamily
AW19_RS11725	SM00862	Transcriptional regulatory protein, C terminal
AW19_RS11775	SM00382	ATPases associated with a variety of cellular activities
AW19_RS11795	SM00947	Carbonic anhydrase
AW19_RS11805	SM00822	AW19_RS11805
AW19_RS11815	SM00271	DnaJ molecular chaperone homology domain
AW19_RS11820	SM00354	helix_turn _helix lactose operon repressor
AW19_RS11840	SM00344	helix_turn_helix ASNC type
AW19_RS11875	SM00778	Zinc-binding domain of primase-helicase
AW19_RS11875	SM00885	D5 N terminal like
AW19_RS11895	SM00530	Helix-turn-helix XRE-family like proteins 
AW19_RS11935	SM00857	Resolvase, N terminal domain
AW19_RS11950	SM00937	AW19_RS11950
AW19_RS11980	SM00387	Histidine kinase-like ATPases
AW19_RS11980	SM00388	His Kinase A (phosphoacceptor) domain
AW19_RS11985	SM00448	cheY-homologous receiver domain
AW19_RS11985	SM00862	Transcriptional regulatory protein, C terminal
AW19_RS12015	SM00822	AW19_RS12015
AW19_RS12045	SM01011	Aminopeptidase P, N-terminal domain
AW19_RS12110	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AW19_RS12115	SM00861	Transketolase, pyrimidine binding domain
AW19_RS12160	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AW19_RS12165	SM00731	SprT homologues.
AW19_RS12190	SM00732	Likely ribonuclease with RNase H fold.
AW19_RS12225	SM01152	AW19_RS12225
AW19_RS12235	SM00729	Elongator protein 3, MiaB family, Radical SAM
AW19_RS12260	SM00478	endonuclease III
AW19_RS12260	SM00525	AW19_RS12260
AW19_RS12450	SM00382	ATPases associated with a variety of cellular activities
AW19_RS12450	SM01086	C-terminal, D2-small domain, of ClpB protein
AW19_RS12530	SM00530	Helix-turn-helix XRE-family like proteins 
AW19_RS12550	SM00354	helix_turn _helix lactose operon repressor
AW19_RS12580	SM00382	ATPases associated with a variety of cellular activities
AW19_RS12745	SM00382	ATPases associated with a variety of cellular activities
AW19_RS12745	SM01086	C-terminal, D2-small domain, of ClpB protein
AW19_RS12820	SM00382	ATPases associated with a variety of cellular activities
AW19_RS12905	SM00052	Putative diguanylate phosphodiesterase
AW19_RS12905	SM00091	PAS domain
AW19_RS12905	SM00267	diguanylate cyclase
AW19_RS13025	SM00862	Transcriptional regulatory protein, C terminal
AW19_RS13095	SM00858	AW19_RS13095
AW19_RS13115	SM00382	ATPases associated with a variety of cellular activities
AW19_RS13140	SM00382	ATPases associated with a variety of cellular activities
AW19_RS13220	SM00382	ATPases associated with a variety of cellular activities
AW19_RS13240	SM00823	Phosphopantetheine attachment site
AW19_RS13240	SM00824	Thioesterase
AW19_RS13245	SM00923	MbtH-like protein
AW19_RS13290	SM00862	Transcriptional regulatory protein, C terminal
AW19_RS13380	SM00342	helix_turn_helix, arabinose operon control protein
AW19_RS13395	SM00729	Elongator protein 3, MiaB family, Radical SAM
AW19_RS13405	SM00563	Phosphate acyltransferases
AW19_RS13410	SM00434	DNA Topoisomerase IV
AW19_RS13430	SM00387	Histidine kinase-like ATPases
AW19_RS13430	SM00433	TopoisomeraseII
AW19_RS13500	SM01118	AW19_RS13500
AW19_RS13505	SM00287	Bacterial SH3 domain homologues
AW19_RS13510	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AW19_RS13520	SM00905	Dihydroneopterin aldolase
AW19_RS13525	SM01207	AW19_RS13525
AW19_RS13540	SM00400	zinc finger
AW19_RS13540	SM00493	AW19_RS13540
AW19_RS13540	SM00766	DNA primase DnaG DnaB-binding
AW19_RS13625	SM00869	Autotransporter beta-domain
AW19_RS13655	SM00858	AW19_RS13655
AW19_RS13675	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AW19_RS13675	SM00895	AW19_RS13675
AW19_RS13735	SM00829	Enoylreductase
AW19_RS13740	SM00822	AW19_RS13740
AW19_RS13760	SM00347	helix_turn_helix multiple antibiotic resistance protein
AW19_RS13780	SM00530	Helix-turn-helix XRE-family like proteins 
AW19_RS13800	SM00857	Resolvase, N terminal domain
AW19_RS13850	SM00749	bacterial OsmY and nodulation domain
AW19_RS13865	SM00073	Histidine Phosphotransfer domain
AW19_RS13865	SM00091	PAS domain
AW19_RS13865	SM00387	Histidine kinase-like ATPases
AW19_RS13865	SM00388	His Kinase A (phosphoacceptor) domain
AW19_RS13865	SM00448	cheY-homologous receiver domain
AW19_RS13870	SM00729	Elongator protein 3, MiaB family, Radical SAM
AW19_RS13920	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AW19_RS13925	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AW19_RS13960	SM00382	ATPases associated with a variety of cellular activities
AW19_RS13990	SM00382	ATPases associated with a variety of cellular activities
AW19_RS14035	SM00642	Alpha-amylase domain
AW19_RS14045	SM00354	helix_turn _helix lactose operon repressor
AW19_RS14050	SM00831	Cation transporter/ATPase, N-terminus
AW19_RS14175	SM00316	Ribosomal protein S1-like RNA-binding domain
AW19_RS14200	SM00052	Putative diguanylate phosphodiesterase
AW19_RS14200	SM00267	diguanylate cyclase
AW19_RS14205	SM00829	Enoylreductase
AW19_RS14230	SM00878	Biotin carboxylase C-terminal domain
AW19_RS14260	SM00267	diguanylate cyclase
AW19_RS14270	SM00357	Cold shock protein domain
AW19_RS14275	SM00357	Cold shock protein domain
AW19_RS14330	SM00530	Helix-turn-helix XRE-family like proteins 
AW19_RS14360	SM01005	Alanine racemase, C-terminal domain
AW19_RS14365	SM00382	ATPases associated with a variety of cellular activities
AW19_RS14370	SM00829	Enoylreductase
AW19_RS14410	SM00563	Phosphate acyltransferases
AW19_RS14440	SM00382	ATPases associated with a variety of cellular activities
AW19_RS14485	SM00912	haemagglutination activity domain
AW19_RS14490	SM01018	B12 binding domain
AW19_RS14495	SM00346	helix_turn_helix isocitrate lyase regulation
AW19_RS14555	SM00798	AICARFT/IMPCHase bienzyme
AW19_RS14555	SM00851	MGS-like domain
AW19_RS14560	SM01209	AW19_RS14560
AW19_RS14560	SM01210	AW19_RS14560
AW19_RS14570	SM00411	bacterial (prokaryotic) histone like domain
AW19_RS14625	SM00876	Biotin and Thiamin Synthesis associated domain
AW19_RS14630	SM00663	RNA polymerase I subunit A N-terminus
AW19_RS14655	SM00649	Ribosomal protein L11/L12
AW19_RS14660	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AW19_RS14660	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AW19_RS14775	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AW19_RS14780	SM01004	Delta-aminolevulinic acid dehydratase
AW19_RS14875	SM00382	ATPases associated with a variety of cellular activities
AW19_RS14925	SM00382	ATPases associated with a variety of cellular activities
AW19_RS14930	SM00382	ATPases associated with a variety of cellular activities
AW19_RS14975	SM00382	ATPases associated with a variety of cellular activities
AW19_RS14980	SM00382	ATPases associated with a variety of cellular activities
AW19_RS14980	SM00962	SRP54-type protein, GTPase domain
AW19_RS14980	SM00963	SRP54-type protein, helical bundle domain
AW19_RS15075	SM00341	Helicase and RNase D C-terminal
AW19_RS15075	SM00487	DEAD-like helicases superfamily
AW19_RS15075	SM00490	helicase superfamily c-terminal domain
AW19_RS15075	SM00956	AW19_RS15075
AW19_RS15150	SM01219	AW19_RS15150
AW19_RS15245	SM00984	UDP binding domain
AW19_RS15270	SM00357	Cold shock protein domain
AW19_RS15270	SM00382	ATPases associated with a variety of cellular activities
AW19_RS15270	SM00959	Rho termination factor, N-terminal domain
AW19_RS15280	SM00487	DEAD-like helicases superfamily
AW19_RS15280	SM00490	helicase superfamily c-terminal domain
AW19_RS15345	SM00507	HNH nucleases
AW19_RS15385	SM00382	ATPases associated with a variety of cellular activities
AW19_RS15490	SM00382	ATPases associated with a variety of cellular activities
AW19_RS15530	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AW19_RS15570	SM00487	DEAD-like helicases superfamily
AW19_RS15570	SM00490	helicase superfamily c-terminal domain
AW19_RS15575	SM00354	helix_turn _helix lactose operon repressor
AW19_RS15590	SM00382	ATPases associated with a variety of cellular activities
AW19_RS15590	SM01086	C-terminal, D2-small domain, of ClpB protein
AW19_RS15675	SM00448	cheY-homologous receiver domain
AW19_RS15675	SM00862	Transcriptional regulatory protein, C terminal
AW19_RS15680	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AW19_RS15680	SM00387	Histidine kinase-like ATPases
AW19_RS15680	SM00388	His Kinase A (phosphoacceptor) domain
AW19_RS15685	SM00342	helix_turn_helix, arabinose operon control protein
AW19_RS15695	SM00971	Serine acetyltransferase, N-terminal
AW19_RS15715	SM00450	Rhodanese Homology Domain
AW19_RS15740	SM00829	Enoylreductase
AW19_RS15780	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AW19_RS15780	SM01232	AW19_RS15780
AW19_RS15860	SM00479	AW19_RS15860
AW19_RS16070	SM00849	Metallo-beta-lactamase superfamily
AW19_RS16080	SM00052	Putative diguanylate phosphodiesterase
AW19_RS16080	SM00091	PAS domain
AW19_RS16080	SM00267	diguanylate cyclase
AW19_RS16100	SM00532	Ligase N family
AW19_RS16105	SM00072	Guanylate kinase homologues.
AW19_RS16110	SM01409	AW19_RS16110
AW19_RS16115	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AW19_RS16115	SM00954	Region found in RelA / SpoT proteins
AW19_RS16125	SM00487	DEAD-like helicases superfamily
AW19_RS16125	SM00490	helicase superfamily c-terminal domain
AW19_RS16145	SM00421	helix_turn_helix, Lux Regulon
AW19_RS16150	SM00421	helix_turn_helix, Lux Regulon
AW19_RS16185	SM01230	AW19_RS16185
AW19_RS16190	SM00091	PAS domain
AW19_RS16190	SM00387	Histidine kinase-like ATPases
AW19_RS16190	SM00388	His Kinase A (phosphoacceptor) domain
AW19_RS16195	SM00382	ATPases associated with a variety of cellular activities
AW19_RS16195	SM00448	cheY-homologous receiver domain
AW19_RS16200	SM00729	Elongator protein 3, MiaB family, Radical SAM
AW19_RS16215	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AW19_RS16215	SM00474	3'-5' exonuclease
AW19_RS16215	SM00475	5'-3' exonuclease
AW19_RS16215	SM00482	DNA polymerase A domain
AW19_RS16270	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AW19_RS16270	SM00895	AW19_RS16270
AW19_RS16280	SM00354	helix_turn _helix lactose operon repressor
AW19_RS16300	SM00382	ATPases associated with a variety of cellular activities
AW19_RS16315	SM00382	ATPases associated with a variety of cellular activities
AW19_RS16320	SM00327	von Willebrand factor (vWF) type A domain
AW19_RS16335	SM00344	helix_turn_helix ASNC type
AW19_RS16345	SM01228	AW19_RS16345
AW19_RS16390	SM00382	ATPases associated with a variety of cellular activities
AW19_RS16430	SM00382	ATPases associated with a variety of cellular activities
AW19_RS16445	SM00062	Bacterial periplasmic substrate-binding proteins
AW19_RS16475	SM00421	helix_turn_helix, Lux Regulon
AW19_RS16475	SM00448	cheY-homologous receiver domain
AW19_RS16480	SM00387	Histidine kinase-like ATPases
AW19_RS16480	SM00388	His Kinase A (phosphoacceptor) domain
AW19_RS16490	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AW19_RS16490	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AW19_RS16500	SM00382	ATPases associated with a variety of cellular activities
AW19_RS16500	SM00930	AW19_RS16500
AW19_RS16535	SM00382	ATPases associated with a variety of cellular activities
AW19_RS16535	SM00760	Bacterial dnaA protein helix-turn-helix domain
AW19_RS16540	SM00480	DNA polymerase III beta subunit
AW19_RS16550	SM00387	Histidine kinase-like ATPases
AW19_RS16550	SM00433	TopoisomeraseII
AW19_RS16605	SM00642	Alpha-amylase domain
AW19_RS16685	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AW19_RS16700	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AW19_RS16700	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AW19_RS16700	SM01358	AW19_RS16700
AW19_RS16715	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AW19_RS16770	SM00342	helix_turn_helix, arabinose operon control protein
AW19_RS16800	SM00382	ATPases associated with a variety of cellular activities
AW19_RS16810	SM00342	helix_turn_helix, arabinose operon control protein
AW19_RS16815	SM00062	Bacterial periplasmic substrate-binding proteins
AW19_RS16815	SM00387	Histidine kinase-like ATPases
AW19_RS16815	SM00388	His Kinase A (phosphoacceptor) domain
AW19_RS16815	SM00448	cheY-homologous receiver domain
AW19_RS16835	SM00354	helix_turn _helix lactose operon repressor
AW19_RS16875	SM00421	helix_turn_helix, Lux Regulon
AW19_RS16875	SM00448	cheY-homologous receiver domain
AW19_RS16880	SM00387	Histidine kinase-like ATPases
AW19_RS16895	SM00912	haemagglutination activity domain
AW19_RS16905	SM00912	haemagglutination activity domain
AW19_RS16925	SM00382	ATPases associated with a variety of cellular activities
AW19_RS16930	SM00382	ATPases associated with a variety of cellular activities
AW19_RS16975	SM00028	Tetratricopeptide repeats
AW19_RS16980	SM00052	Putative diguanylate phosphodiesterase
AW19_RS17015	SM00052	Putative diguanylate phosphodiesterase
AW19_RS17060	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AW19_RS17090	SM00862	Transcriptional regulatory protein, C terminal
AW19_RS17185	SM00354	helix_turn _helix lactose operon repressor
AW19_RS17205	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AW19_RS17240	SM00382	ATPases associated with a variety of cellular activities
AW19_RS17250	SM00642	Alpha-amylase domain
AW19_RS17255	SM00642	Alpha-amylase domain
AW19_RS17285	SM00420	helix_turn_helix, Deoxyribose operon repressor
AW19_RS17285	SM01134	AW19_RS17285
AW19_RS17295	SM00450	Rhodanese Homology Domain
AW19_RS17300	SM00421	helix_turn_helix, Lux Regulon
AW19_RS17345	SM00899	AW19_RS17345
AW19_RS17350	SM00316	Ribosomal protein S1-like RNA-binding domain
AW19_RS17350	SM00732	Likely ribonuclease with RNase H fold.
AW19_RS17380	SM00448	cheY-homologous receiver domain
AW19_RS17380	SM00862	Transcriptional regulatory protein, C terminal
AW19_RS17385	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AW19_RS17385	SM00387	Histidine kinase-like ATPases
AW19_RS17385	SM00388	His Kinase A (phosphoacceptor) domain
AW19_RS17400	SM00363	S4 RNA-binding domain
AW19_RS17445	SM00965	Secretin and TonB N terminus short domain
AW19_RS17515	SM00354	helix_turn _helix lactose operon repressor
AW19_RS17530	SM00382	ATPases associated with a variety of cellular activities
AW19_RS17555	SM00100	Cyclic nucleotide-monophosphate binding domain
AW19_RS17555	SM00419	helix_turn_helix, cAMP Regulatory protein
AW19_RS17590	SM00062	Bacterial periplasmic substrate-binding proteins
AW19_RS17595	SM00382	ATPases associated with a variety of cellular activities
AW19_RS17620	SM00382	ATPases associated with a variety of cellular activities
AW19_RS17685	SM00838	Elongation factor G C-terminus
AW19_RS17685	SM00889	Elongation factor G, domain IV
AW19_RS17705	SM01403	AW19_RS17705
AW19_RS17725	SM01382	AW19_RS17725
AW19_RS17725	SM01383	AW19_RS17725
AW19_RS17740	SM00322	K homology RNA-binding domain
AW19_RS17760	SM01374	AW19_RS17760
AW19_RS17765	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AW19_RS17830	SM00363	S4 RNA-binding domain
AW19_RS17830	SM01390	AW19_RS17830
AW19_RS17835	SM00662	RNA polymerases D
AW19_RS17850	SM00422	helix_turn_helix, mercury resistance
AW19_RS17960	SM00421	helix_turn_helix, Lux Regulon
AW19_RS17960	SM00448	cheY-homologous receiver domain
AW19_RS17965	SM00387	Histidine kinase-like ATPases
AW19_RS17965	SM00388	His Kinase A (phosphoacceptor) domain
AW19_RS17965	SM00448	cheY-homologous receiver domain
AW19_RS18030	SM00342	helix_turn_helix, arabinose operon control protein
AW19_RS18080	SM00382	ATPases associated with a variety of cellular activities
AW19_RS18145	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AW19_RS18150	SM00382	ATPases associated with a variety of cellular activities
AW19_RS18335	SM00530	Helix-turn-helix XRE-family like proteins 
AW19_RS18470	SM00954	Region found in RelA / SpoT proteins
AW19_RS18500	SM00477	DNA/RNA non-specific endonuclease
AW19_RS18500	SM00892	DNA/RNA non-specific endonuclease
AW19_RS18580	SM00858	AW19_RS18580
AW19_RS18600	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AW19_RS18630	SM00883	Chaperonin 10 Kd subunit
AW19_RS18650	SM00841	Elongation factor P, C-terminal
AW19_RS18650	SM01185	AW19_RS18650
AW19_RS18710	SM00479	AW19_RS18710
AW19_RS18750	SM00257	Lysin motif
AW19_RS18750	SM00646	AW19_RS18750
AW19_RS18755	SM00853	MutL C terminal dimerisation domain
AW19_RS18755	SM01340	AW19_RS18755
AW19_RS18775	SM00244	prohibitin homologues
AW19_RS18780	SM00244	prohibitin homologues
AW19_RS18790	SM00788	Adenylosuccinate synthetase
AW19_RS18800	SM00316	Ribosomal protein S1-like RNA-binding domain
AW19_RS18800	SM00357	Cold shock protein domain
AW19_RS18800	SM00955	AW19_RS18800
AW19_RS18805	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AW19_RS18890	SM01091	Transporter associated domain
AW19_RS18920	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AW19_RS18920	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AW19_RS18990	SM00387	Histidine kinase-like ATPases
AW19_RS18990	SM00388	His Kinase A (phosphoacceptor) domain
AW19_RS18995	SM00448	cheY-homologous receiver domain
AW19_RS18995	SM00862	Transcriptional regulatory protein, C terminal
AW19_RS19010	SM01103	AW19_RS19010
AW19_RS19020	SM00382	ATPases associated with a variety of cellular activities
AW19_RS19055	SM00316	Ribosomal protein S1-like RNA-binding domain
AW19_RS19055	SM00322	K homology RNA-binding domain
AW19_RS19060	SM00173	Ras subfamily of RAS small GTPases
AW19_RS19075	SM01387	AW19_RS19075
AW19_RS19080	SM00316	Ribosomal protein S1-like RNA-binding domain
AW19_RS19080	SM00322	K homology RNA-binding domain
AW19_RS19085	SM00028	Tetratricopeptide repeats
AW19_RS19090	SM00487	DEAD-like helicases superfamily
AW19_RS19090	SM00490	helicase superfamily c-terminal domain
AW19_RS19160	SM00382	ATPases associated with a variety of cellular activities
AW19_RS19175	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AW19_RS19185	SM00072	Guanylate kinase homologues.
AW19_RS19195	SM00382	ATPases associated with a variety of cellular activities
AW19_RS19200	SM00382	ATPases associated with a variety of cellular activities
AW19_RS19225	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AW19_RS19225	SM00866	AW19_RS19225
AW19_RS19240	SM00382	ATPases associated with a variety of cellular activities
AW19_RS19245	SM00382	ATPases associated with a variety of cellular activities
AW19_RS19340	SM00487	DEAD-like helicases superfamily
AW19_RS19355	SM00912	haemagglutination activity domain
AW19_RS19375	SM00421	helix_turn_helix, Lux Regulon
AW19_RS19405	SM01133	AW19_RS19405
AW19_RS19425	SM00382	ATPases associated with a variety of cellular activities
AW19_RS19480	SM01120	AW19_RS19480
AW19_RS19520	SM00091	PAS domain
AW19_RS19525	SM00267	diguanylate cyclase
AW19_RS19575	SM00749	bacterial OsmY and nodulation domain
AW19_RS19595	SM01133	AW19_RS19595
AW19_RS19600	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
AW19_RS19625	SM00382	ATPases associated with a variety of cellular activities
AW19_RS19635	SM00530	Helix-turn-helix XRE-family like proteins 
AW19_RS19640	SM00829	Enoylreductase
AW19_RS19650	SM00382	ATPases associated with a variety of cellular activities
AW19_RS19655	SM00831	Cation transporter/ATPase, N-terminus
AW19_RS19675	SM00855	Phosphoglycerate mutase family
AW19_RS19680	SM00342	helix_turn_helix, arabinose operon control protein
AW19_RS19680	SM00871	Bacterial transcription activator, effector binding domain
AW19_RS19690	SM00448	cheY-homologous receiver domain
AW19_RS19690	SM00862	Transcriptional regulatory protein, C terminal
AW19_RS19725	SM00852	Probable molybdopterin binding domain
AW19_RS19750	SM00271	DnaJ molecular chaperone homology domain
AW19_RS19770	SM00904	Riboflavin kinase
AW19_RS19800	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
AW19_RS19805	SM00851	MGS-like domain
AW19_RS19805	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AW19_RS19850	SM00650	Ribosomal RNA adenine dimethylases
AW19_RS19870	SM00271	DnaJ molecular chaperone homology domain
AW19_RS19880	SM00487	DEAD-like helicases superfamily
AW19_RS19880	SM00490	helicase superfamily c-terminal domain
AW19_RS19885	SM00486	DNA polymerase type-B family
AW19_RS19895	SM00382	ATPases associated with a variety of cellular activities
AW19_RS19945	SM01329	AW19_RS19945
AW19_RS19950	SM00917	LeuA allosteric (dimerisation) domain
AW19_RS19975	SM00354	helix_turn _helix lactose operon repressor
AW19_RS20050	SM00842	Cell division protein FtsA
AW19_RS20055	SM00864	Tubulin/FtsZ family, GTPase domain
AW19_RS20055	SM00865	Tubulin/FtsZ family, C-terminal domain
AW19_RS20075	SM00957	SecA DEAD-like domain
AW19_RS20075	SM00958	SecA preprotein cross-linking domain
AW19_RS20100	SM01240	AW19_RS20100
AW19_RS20125	SM00644	AW19_RS20125
AW19_RS20140	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AW19_RS20140	SM00895	AW19_RS20140
AW19_RS20165	SM00342	helix_turn_helix, arabinose operon control protein
AW19_RS20230	SM00947	Carbonic anhydrase
AW19_RS20235	SM00382	ATPases associated with a variety of cellular activities
AW19_RS20295	SM00487	DEAD-like helicases superfamily
AW19_RS20295	SM00490	helicase superfamily c-terminal domain
AW19_RS20295	SM00847	Helicase associated domain (HA2)  Add an annotation
AW19_RS20305	SM00382	ATPases associated with a variety of cellular activities
AW19_RS20350	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AW19_RS20355	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AW19_RS20360	SM00073	Histidine Phosphotransfer domain
AW19_RS20360	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AW19_RS20360	SM00387	Histidine kinase-like ATPases
AW19_RS20360	SM00388	His Kinase A (phosphoacceptor) domain
AW19_RS20360	SM00448	cheY-homologous receiver domain
AW19_RS20370	SM00954	Region found in RelA / SpoT proteins
AW19_RS20385	SM01192	AW19_RS20385
AW19_RS20385	SM01193	AW19_RS20385
AW19_RS20465	SM00382	ATPases associated with a variety of cellular activities
AW19_RS20475	SM00062	Bacterial periplasmic substrate-binding proteins
AW19_RS20475	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AW19_RS20510	SM00257	Lysin motif
AW19_RS20520	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
AW19_RS20520	SM00534	ATPase domain of DNA mismatch repair MUTS family
AW19_RS20590	SM00382	ATPases associated with a variety of cellular activities
AW19_RS20600	SM00382	ATPases associated with a variety of cellular activities
AW19_RS20645	SM00869	Autotransporter beta-domain
AW19_RS20650	SM00507	HNH nucleases
