locus-tag class description CH53_RS00005 PF02223 Thymidylate kinase CH53_RS00010 PF02618 YceG-like family CH53_RS00015 PF01063 Amino-transferase class IV CH53_RS00020 PF00109 Beta-ketoacyl synthase, N-terminal domain CH53_RS00020 PF02801 Beta-ketoacyl synthase, C-terminal domain CH53_RS00025 PF00550 Phosphopantetheine attachment site CH53_RS00035 PF00698 Acyl transferase domain CH53_RS00040 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CH53_RS00040 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CH53_RS00045 PF02504 Fatty acid synthesis protein CH53_RS00050 PF01783 Ribosomal L32p protein family CH53_RS00055 PF02620 Large ribosomal RNA subunit accumulation protein YceD CH53_RS00060 PF02545 Maf-like protein CH53_RS00065 PF00849 RNA pseudouridylate synthase CH53_RS00065 PF01479 S4 domain CH53_RS00070 PF12111 Polyribonucleotide phosphorylase C terminal CH53_RS00070 PF00575 S1 RNA binding domain CH53_RS00070 PF10150 Ribonuclease E/G family CH53_RS00075 PF03992 Antibiotic biosynthesis monooxygenase CH53_RS00080 PF01979 Amidohydrolase family CH53_RS00085 PF06183 DinI-like family CH53_RS00090 PF13991 BssS protein family CH53_RS00095 PF01266 FAD dependent oxidoreductase CH53_RS00100 PF00196 Bacterial regulatory proteins, luxR family CH53_RS00110 PF01594 AI-2E family transporter CH53_RS00115 PF00581 Rhodanese-like domain CH53_RS00115 PF12368 Rhodanase C-terminal CH53_RS00115 PF17773 UPF0176 acylphosphatase like domain CH53_RS00125 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CH53_RS00125 PF00384 Molybdopterin oxidoreductase CH53_RS00125 PF01568 Molydopterin dinucleotide binding domain CH53_RS00130 PF03916 Polysulphide reductase, NrfD CH53_RS00135 PF13247 4Fe-4S dicluster domain CH53_RS00140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH53_RS00140 PF00512 His Kinase A (phospho-acceptor) domain CH53_RS00145 PF00072 Response regulator receiver domain CH53_RS00145 PF00196 Bacterial regulatory proteins, luxR family CH53_RS00150 PF03279 Bacterial lipid A biosynthesis acyltransferase CH53_RS00155 PF07681 DoxX CH53_RS00160 PF07690 Major Facilitator Superfamily CH53_RS00165 PF00854 POT family CH53_RS00180 PF07119 Protein of unknown function (DUF1375) CH53_RS00185 PF00535 Glycosyl transferase family 2 CH53_RS00190 PF04349 Periplasmic glucan biosynthesis protein, MdoG CH53_RS00195 PF01757 Acyltransferase family CH53_RS00205 PF02080 TrkA-C domain CH53_RS00205 PF00999 Sodium/hydrogen exchanger family CH53_RS00205 PF03471 Transporter associated domain CH53_RS00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH53_RS00210 PF03466 LysR substrate binding domain CH53_RS00220 PF00765 Autoinducer synthase CH53_RS00225 PF03472 Autoinducer binding domain CH53_RS00225 PF00196 Bacterial regulatory proteins, luxR family CH53_RS00230 PF04960 Glutaminase CH53_RS00235 PF13520 Amino acid permease CH53_RS00240 PF00282 Pyridoxal-dependent decarboxylase conserved domain CH53_RS00260 PF02369 Bacterial Ig-like domain (group 1) CH53_RS00260 PF09134 Invasin, domain 3 CH53_RS00260 PF11924 Inverse autotransporter, beta-domain CH53_RS00280 PF13953 PapC C-terminal domain CH53_RS00280 PF13954 PapC N-terminal domain CH53_RS00280 PF00577 Outer membrane usher protein CH53_RS00285 PF00696 Amino acid kinase family CH53_RS00290 PF11392 Protein of unknown function (DUF2877) CH53_RS00295 PF06545 Protein of unknown function (DUF1116) CH53_RS00300 PF02629 CoA binding domain CH53_RS00300 PF00549 CoA-ligase CH53_RS00305 PF02615 Malate/L-lactate dehydrogenase CH53_RS00310 PF01546 Peptidase family M20/M25/M40 CH53_RS00315 PF07883 Cupin domain CH53_RS00315 PF05899 Protein of unknown function (DUF861) CH53_RS00320 PF02595 Glycerate kinase family CH53_RS00325 PF00860 Permease family CH53_RS00330 PF01979 Amidohydrolase family CH53_RS00335 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CH53_RS00340 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CH53_RS00340 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CH53_RS00345 PF01261 Xylose isomerase-like TIM barrel CH53_RS00350 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CH53_RS00350 PF00205 Thiamine pyrophosphate enzyme, central domain CH53_RS00350 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CH53_RS00355 PF09339 IclR helix-turn-helix domain CH53_RS00355 PF01614 Bacterial transcriptional regulator CH53_RS00360 PF04115 Ureidoglycolate lyase CH53_RS00365 PF03466 LysR substrate binding domain CH53_RS00365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH53_RS00370 PF00072 Response regulator receiver domain CH53_RS00370 PF00990 Diguanylate cyclase, GGDEF domain CH53_RS00375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH53_RS00375 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CH53_RS00375 PF00072 Response regulator receiver domain CH53_RS00375 PF01627 Hpt domain CH53_RS00375 PF00512 His Kinase A (phospho-acceptor) domain CH53_RS00375 PF00672 HAMP domain CH53_RS00380 PF00703 Glycosyl hydrolases family 2 CH53_RS00380 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CH53_RS00380 PF16355 Domain of unknown function (DUF4982) CH53_RS00380 PF02837 Glycosyl hydrolases family 2, sugar binding domain CH53_RS00400 PF03552 Cellulose synthase CH53_RS00400 PF00535 Glycosyl transferase family 2 CH53_RS00400 PF07238 PilZ domain CH53_RS00410 PF00483 Nucleotidyl transferase CH53_RS00415 PF01740 STAS domain CH53_RS00420 PF00072 Response regulator receiver domain CH53_RS00420 PF00486 Transcriptional regulatory protein, C terminal CH53_RS00430 PF00343 Carbohydrate phosphorylase CH53_RS00460 PF02753 Pili assembly chaperone PapD, C-terminal domain CH53_RS00460 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CH53_RS00465 PF00577 Outer membrane usher protein CH53_RS00465 PF13954 PapC N-terminal domain CH53_RS00465 PF13953 PapC C-terminal domain CH53_RS00475 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CH53_RS00475 PF02753 Pili assembly chaperone PapD, C-terminal domain CH53_RS00510 PF04358 DsrC like protein CH53_RS00515 PF00708 Acylphosphatase CH53_RS00520 PF17785 PUA-like domain CH53_RS00520 PF10672 S-adenosylmethionine-dependent methyltransferase CH53_RS00525 PF08755 Hemimethylated DNA-binding protein YccV like CH53_RS00530 PF13380 CoA binding domain CH53_RS00535 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) CH53_RS00540 PF02142 MGS-like domain CH53_RS00545 PF12462 DNA helicase IV / RNA helicase N terminal CH53_RS00545 PF00580 UvrD/REP helicase N-terminal domain CH53_RS00545 PF13361 UvrD-like helicase C-terminal domain CH53_RS00550 PF03733 Inner membrane component domain CH53_RS00555 PF12805 FUSC-like inner membrane protein yccS CH53_RS00560 PF04994 TfoX C-terminal domain CH53_RS00560 PF04993 TfoX N-terminal domain CH53_RS00565 PF03846 Cell division inhibitor SulA CH53_RS00570 PF01389 OmpA-like transmembrane domain CH53_RS00570 PF00691 OmpA family CH53_RS00575 PF06303 MatP N-terminal domain CH53_RS00575 PF17414 MatP C-terminal ribbon-helix-helix domain CH53_RS00580 PF13654 AAA domain CH53_RS00580 PF05362 Lon protease (S16) C-terminal proteolytic domain CH53_RS00585 PF07977 FabA-like domain CH53_RS00590 PF01638 HxlR-like helix-turn-helix CH53_RS00595 PF00109 Beta-ketoacyl synthase, N-terminal domain CH53_RS00595 PF02801 Beta-ketoacyl synthase, C-terminal domain CH53_RS00600 PF03886 ABC-type transport auxiliary lipoprotein component CH53_RS00605 PF02470 MlaD protein CH53_RS00610 PF04403 Paraquat-inducible protein A CH53_RS00615 PF00005 ABC transporter CH53_RS00615 PF16326 ABC transporter C-terminal domain CH53_RS00615 PF12848 ABC transporter CH53_RS00620 PF10672 S-adenosylmethionine-dependent methyltransferase CH53_RS00620 PF02926 THUMP domain CH53_RS00620 PF01170 Putative RNA methylase family UPF0020 CH53_RS00625 PF03476 MOSC N-terminal beta barrel domain CH53_RS00625 PF03473 MOSC domain CH53_RS00625 PF00111 2Fe-2S iron-sulfur cluster binding domain CH53_RS00630 PF07126 Cell-division protein ZapC CH53_RS00635 PF01180 Dihydroorotate dehydrogenase CH53_RS00640 PF11940 Domain of unknown function (DUF3458) Ig-like fold CH53_RS00640 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CH53_RS00640 PF01433 Peptidase family M1 domain CH53_RS00645 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CH53_RS00645 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CH53_RS00650 PF00152 tRNA synthetases class II (D, K and N) CH53_RS00650 PF01336 OB-fold nucleic acid binding domain CH53_RS00655 PF00267 Gram-negative porin CH53_RS00660 PF00155 Aminotransferase class I and II CH53_RS00665 PF00563 EAL domain CH53_RS00665 PF12792 CSS motif domain associated with EAL CH53_RS00670 PF00753 Metallo-beta-lactamase superfamily CH53_RS00675 PF05951 Bacterial protein of unknown function (DUF882) CH53_RS00680 PF01471 Putative peptidoglycan binding domain CH53_RS00680 PF03734 L,D-transpeptidase catalytic domain CH53_RS00685 PF16330 MukB hinge domain CH53_RS00685 PF04310 MukB N-terminal CH53_RS00690 PF04288 MukE-like family CH53_RS00695 PF17192 MukF middle domain CH53_RS00695 PF03882 MukF winged-helix domain CH53_RS00695 PF17193 MukF C-terminal domain CH53_RS00700 PF13847 Methyltransferase domain CH53_RS00705 PF02698 DUF218 domain CH53_RS00710 PF01636 Phosphotransferase enzyme family CH53_RS00715 PF02348 Cytidylyltransferase CH53_RS00720 PF03966 Trm112p-like protein CH53_RS00725 PF00313 'Cold-shock' DNA-binding domain CH53_RS00730 PF00313 'Cold-shock' DNA-binding domain CH53_RS00735 PF07063 Domain of unknown function (DUF1338) CH53_RS00740 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CH53_RS00745 PF00005 ABC transporter CH53_RS00745 PF00664 ABC transporter transmembrane region CH53_RS00750 PF03772 Competence protein CH53_RS00750 PF00753 Metallo-beta-lactamase superfamily CH53_RS00755 PF00216 Bacterial DNA-binding protein CH53_RS00760 PF00575 S1 RNA binding domain CH53_RS00765 PF02224 Cytidylate kinase CH53_RS00775 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CH53_RS00780 PF00266 Aminotransferase class-V CH53_RS00785 PF17763 Glutaminase/Asparaginase C-terminal domain CH53_RS00785 PF00710 Asparaginase, N-terminal CH53_RS00790 PF18381 YcaO cyclodehydratase C-terminal domain CH53_RS00790 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding CH53_RS00795 PF01226 Formate/nitrite transporter CH53_RS00800 PF01228 Glycine radical CH53_RS00800 PF02901 Pyruvate formate lyase-like CH53_RS00805 PF04055 Radical SAM superfamily CH53_RS00810 PF07690 Major Facilitator Superfamily CH53_RS00815 PF02403 Seryl-tRNA synthetase N-terminal domain CH53_RS00815 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CH53_RS00820 PF12002 MgsA AAA+ ATPase C terminal CH53_RS00820 PF16193 AAA C-terminal domain CH53_RS00820 PF00004 ATPase family associated with various cellular activities (AAA) CH53_RS00825 PF03548 Outer membrane lipoprotein carrier protein LolA CH53_RS00830 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CH53_RS00830 PF09397 Ftsk gamma domain CH53_RS00830 PF17854 FtsK alpha domain CH53_RS00830 PF01580 FtsK/SpoIIIE family CH53_RS00835 PF01037 Lrp/AsnC ligand binding domain CH53_RS00840 PF07992 Pyridine nucleotide-disulphide oxidoreductase CH53_RS00845 PF00005 ABC transporter CH53_RS00845 PF00664 ABC transporter transmembrane region CH53_RS00850 PF00005 ABC transporter CH53_RS00850 PF00664 ABC transporter transmembrane region CH53_RS00855 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CH53_RS00860 PF01176 Translation initiation factor 1A / IF-1 CH53_RS00865 PF10431 C-terminal, D2-small domain, of ClpB protein CH53_RS00865 PF02861 Clp amino terminal domain, pathogenicity island component CH53_RS00865 PF17871 AAA lid domain CH53_RS00865 PF07724 AAA domain (Cdc48 subfamily) CH53_RS00865 PF00004 ATPase family associated with various cellular activities (AAA) CH53_RS00870 PF02617 ATP-dependent Clp protease adaptor protein ClpS CH53_RS00875 PF00313 'Cold-shock' DNA-binding domain CH53_RS00880 PF12704 MacB-like periplasmic core domain CH53_RS00880 PF02687 FtsX-like permease family CH53_RS00880 PF00005 ABC transporter CH53_RS00885 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CH53_RS00890 PF04393 Protein of unknown function (DUF535) CH53_RS00895 PF11398 Protein of unknown function (DUF2813) CH53_RS00900 PF03956 Lysine exporter LysO CH53_RS00905 PF03063 Prismane/CO dehydrogenase family CH53_RS00910 PF00111 2Fe-2S iron-sulfur cluster binding domain CH53_RS00910 PF00970 Oxidoreductase FAD-binding domain CH53_RS00910 PF00175 Oxidoreductase NAD-binding domain CH53_RS00915 PF00205 Thiamine pyrophosphate enzyme, central domain CH53_RS00915 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CH53_RS00915 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CH53_RS00925 PF01212 Beta-eliminating lyase CH53_RS00930 PF11066 Protein of unknown function (DUF2867) CH53_RS00930 PF13460 NAD(P)H-binding CH53_RS00935 PF01370 NAD dependent epimerase/dehydratase family CH53_RS00940 PF12883 Protein of unknown function (DUF3828) CH53_RS00945 PF00005 ABC transporter CH53_RS00950 PF00497 Bacterial extracellular solute-binding proteins, family 3 CH53_RS00955 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS00960 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS00965 PF09339 IclR helix-turn-helix domain CH53_RS00965 PF01614 Bacterial transcriptional regulator CH53_RS00970 PF00171 Aldehyde dehydrogenase family CH53_RS00975 PF00465 Iron-containing alcohol dehydrogenase CH53_RS00980 PF00753 Metallo-beta-lactamase superfamily CH53_RS00985 PF00497 Bacterial extracellular solute-binding proteins, family 3 CH53_RS00990 PF05958 tRNA (Uracil-5-)-methyltransferase CH53_RS00995 PF10767 Protein of unknown function (DUF2593) CH53_RS01000 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS01005 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS01010 PF08402 TOBE domain CH53_RS01010 PF00005 ABC transporter CH53_RS01015 PF13416 Bacterial extracellular solute-binding protein CH53_RS01020 PF10722 Putative bacterial sensory transduction regulator CH53_RS01025 PF07214 Protein of unknown function (DUF1418) CH53_RS01030 PF00462 Glutaredoxin CH53_RS01035 PF06826 Predicted Permease Membrane Region CH53_RS01035 PF02080 TrkA-C domain CH53_RS01045 PF01569 PAP2 superfamily CH53_RS01050 PF01791 DeoC/LacD family aldolase CH53_RS01055 PF08220 DeoR-like helix-turn-helix domain CH53_RS01055 PF00455 DeoR C terminal sensor domain CH53_RS01065 PF03315 Serine dehydratase beta chain CH53_RS01065 PF03313 Serine dehydratase alpha chain CH53_RS01070 PF00768 D-alanyl-D-alanine carboxypeptidase CH53_RS01070 PF07943 Penicillin-binding protein 5, C-terminal domain CH53_RS01075 PF00291 Pyridoxal-phosphate dependent enzyme CH53_RS01075 PF00571 CBS domain CH53_RS01080 PF01053 Cys/Met metabolism PLP-dependent enzyme CH53_RS01085 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS01090 PF00005 ABC transporter CH53_RS01090 PF09383 NIL domain CH53_RS01095 PF03180 NLPA lipoprotein CH53_RS01110 PF13417 Glutathione S-transferase, N-terminal domain CH53_RS01110 PF00043 Glutathione S-transferase, C-terminal domain CH53_RS01115 PF07715 TonB-dependent Receptor Plug Domain CH53_RS01115 PF00593 TonB dependent receptor CH53_RS01120 PF00324 Amino acid permease CH53_RS01125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH53_RS01125 PF03466 LysR substrate binding domain CH53_RS01135 PF03601 Conserved hypothetical protein 698 CH53_RS01140 PF01261 Xylose isomerase-like TIM barrel CH53_RS01145 PF02378 Phosphotransferase system, EIIC CH53_RS01145 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CH53_RS01150 PF00294 pfkB family carbohydrate kinase CH53_RS01155 PF00381 PTS HPr component phosphorylation site CH53_RS01155 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CH53_RS01160 PF00293 NUDIX domain CH53_RS01160 PF13344 Haloacid dehalogenase-like hydrolase CH53_RS01165 PF03264 NapC/NirT cytochrome c family, N-terminal region CH53_RS01170 PF18364 Molybdopterin oxidoreductase N-terminal domain CH53_RS01170 PF00384 Molybdopterin oxidoreductase CH53_RS01170 PF01568 Molydopterin dinucleotide binding domain CH53_RS01175 PF08220 DeoR-like helix-turn-helix domain CH53_RS01175 PF00455 DeoR C terminal sensor domain CH53_RS01180 PF08013 Tagatose 6 phosphate kinase CH53_RS01185 PF03830 PTS system sorbose subfamily IIB component CH53_RS01190 PF03609 PTS system sorbose-specific iic component CH53_RS01195 PF03613 PTS system mannose/fructose/sorbose family IID component CH53_RS01200 PF03610 PTS system fructose IIA component CH53_RS01205 PF01979 Amidohydrolase family CH53_RS01210 PF01380 SIS domain CH53_RS01215 PF01116 Fructose-bisphosphate aldolase class-II CH53_RS01225 PF03692 Putative zinc- or iron-chelating domain CH53_RS01230 PF03222 Tryptophan/tyrosine permease family CH53_RS01235 PF08207 Elongation factor P (EF-P) KOW-like domain CH53_RS01235 PF09285 Elongation factor P, C-terminal CH53_RS01235 PF01132 Elongation factor P (EF-P) OB domain CH53_RS01240 PF03786 D-mannonate dehydratase (UxuA) CH53_RS01245 PF08125 Mannitol dehydrogenase C-terminal domain CH53_RS01245 PF01232 Mannitol dehydrogenase Rossmann domain CH53_RS01250 PF07729 FCD domain CH53_RS01250 PF00392 Bacterial regulatory proteins, gntR family CH53_RS01260 PF07683 Cobalamin synthesis protein cobW C-terminal domain CH53_RS01260 PF02492 CobW/HypB/UreG, nucleotide-binding domain CH53_RS01265 PF01569 PAP2 superfamily CH53_RS01270 PF00877 NlpC/P60 family CH53_RS01275 PF12792 CSS motif domain associated with EAL CH53_RS01275 PF00563 EAL domain CH53_RS01280 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CH53_RS01285 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS01290 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS01290 PF12911 N-terminal TM domain of oligopeptide transport permease C CH53_RS01295 PF00005 ABC transporter CH53_RS01295 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CH53_RS01300 PF13989 YejG-like protein CH53_RS01310 PF07690 Major Facilitator Superfamily CH53_RS01315 PF01479 S4 domain CH53_RS01315 PF00849 RNA pseudouridylate synthase CH53_RS01320 PF04851 Type III restriction enzyme, res subunit CH53_RS01320 PF00271 Helicase conserved C-terminal domain CH53_RS01325 PF01386 Ribosomal L25p family CH53_RS01330 PF04245 37-kD nucleoid-associated bacterial protein CH53_RS01335 PF07208 Protein of unknown function (DUF1414) CH53_RS01340 PF00884 Sulfatase CH53_RS01340 PF11893 Domain of unknown function (DUF3413) CH53_RS01355 PF00194 Eukaryotic-type carbonic anhydrase CH53_RS01360 PF00232 Glycosyl hydrolase family 1 CH53_RS01365 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CH53_RS01365 PF02378 Phosphotransferase system, EIIC CH53_RS01365 PF00367 phosphotransferase system, EIIB CH53_RS01370 PF01418 Helix-turn-helix domain, rpiR family CH53_RS01370 PF01380 SIS domain CH53_RS01390 PF04865 Baseplate J-like protein CH53_RS01430 PF04984 Phage tail sheath protein subtilisin-like domain CH53_RS01430 PF17482 Phage tail sheath C-terminal domain CH53_RS01445 PF00959 Phage lysozyme CH53_RS01455 PF06530 Phage antitermination protein Q CH53_RS01460 PF01381 Helix-turn-helix CH53_RS01460 PF00717 Peptidase S24-like CH53_RS01465 PF06183 DinI-like family CH53_RS01470 PF01278 Omptin family CH53_RS01475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CH53_RS01475 PF00672 HAMP domain CH53_RS01475 PF02743 Cache domain CH53_RS01480 PF12706 Beta-lactamase superfamily domain CH53_RS01490 PF00144 Beta-lactamase CH53_RS01500 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CH53_RS01505 PF05681 Fumarate hydratase (Fumerase) CH53_RS01505 PF05683 Fumarase C-terminus CH53_RS01510 PF03466 LysR substrate binding domain CH53_RS01510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH53_RS01515 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CH53_RS01515 PF14824 Sirohaem biosynthesis protein central CH53_RS01515 PF10414 Sirohaem synthase dimerisation region CH53_RS01520 PF00288 GHMP kinases N terminal domain CH53_RS01525 PF02310 B12 binding domain CH53_RS01530 PF13941 MutL protein CH53_RS01535 PF06368 Methylaspartate mutase E chain (MutE) CH53_RS01540 PF05034 Methylaspartate ammonia-lyase N-terminus CH53_RS01540 PF07476 Methylaspartate ammonia-lyase C-terminus CH53_RS01555 PF00375 Sodium:dicarboxylate symporter family CH53_RS01570 PF13953 PapC C-terminal domain CH53_RS01570 PF13954 PapC N-terminal domain CH53_RS01570 PF00577 Outer membrane usher protein CH53_RS01625 PF00295 Glycosyl hydrolases family 28 CH53_RS01630 PF07470 Glycosyl Hydrolase Family 88 CH53_RS01640 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CH53_RS01640 PF00381 PTS HPr component phosphorylation site CH53_RS01640 PF05524 PEP-utilising enzyme, N-terminal CH53_RS01640 PF00391 PEP-utilising enzyme, mobile domain CH53_RS01640 PF02896 PEP-utilising enzyme, TIM barrel domain CH53_RS01650 PF00267 Gram-negative porin CH53_RS01655 PF07690 Major Facilitator Superfamily CH53_RS01660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH53_RS01660 PF01627 Hpt domain CH53_RS01660 PF16359 RcsD-ABL domain CH53_RS01665 PF00196 Bacterial regulatory proteins, luxR family CH53_RS01665 PF00072 Response regulator receiver domain CH53_RS01670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH53_RS01670 PF00072 Response regulator receiver domain CH53_RS01670 PF09456 RcsC Alpha-Beta-Loop (ABL) CH53_RS01670 PF00512 His Kinase A (phospho-acceptor) domain CH53_RS01675 PF03989 DNA gyrase C-terminal domain, beta-propeller CH53_RS01675 PF00521 DNA gyrase/topoisomerase IV, subunit A CH53_RS01685 PF00317 Ribonucleotide reductase, all-alpha domain CH53_RS01685 PF02867 Ribonucleotide reductase, barrel domain CH53_RS01685 PF03477 ATP cone domain CH53_RS01690 PF00268 Ribonucleotide reductase, small chain CH53_RS01695 PF00111 2Fe-2S iron-sulfur cluster binding domain CH53_RS01700 PF03974 Ecotin CH53_RS01705 PF00082 Subtilase family CH53_RS01725 PF00994 Probable molybdopterin binding domain CH53_RS01730 PF03222 Tryptophan/tyrosine permease family CH53_RS01735 PF07437 YfaZ precursor CH53_RS01740 PF06628 Catalase-related immune-responsive CH53_RS01740 PF00199 Catalase CH53_RS01750 PF00501 AMP-binding enzyme CH53_RS01750 PF13193 AMP-binding enzyme C-terminal domain CH53_RS01755 PF13378 Enolase C-terminal domain-like CH53_RS01760 PF00378 Enoyl-CoA hydratase/isomerase CH53_RS01765 PF12697 Alpha/beta hydrolase family CH53_RS01770 PF16582 Middle domain of thiamine pyrophosphate CH53_RS01770 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CH53_RS01770 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CH53_RS01775 PF00425 chorismate binding enzyme CH53_RS01780 PF05957 Bacterial protein of unknown function (DUF883) CH53_RS01785 PF00920 Dehydratase family CH53_RS01790 PF03928 Haem-degrading CH53_RS01795 PF07690 Major Facilitator Superfamily CH53_RS01800 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CH53_RS01800 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CH53_RS01805 PF00356 Bacterial regulatory proteins, lacI family CH53_RS01810 PF00106 short chain dehydrogenase CH53_RS01815 PF01202 Shikimate kinase CH53_RS01820 PF04074 YhcH/YjgK/YiaL CH53_RS01825 PF06496 Protein of unknown function (DUF1097) CH53_RS01835 PF00361 Proton-conducting membrane transporter CH53_RS01840 PF00361 Proton-conducting membrane transporter CH53_RS01845 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CH53_RS01845 PF00361 Proton-conducting membrane transporter CH53_RS01850 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CH53_RS01855 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CH53_RS01860 PF12838 4Fe-4S dicluster domain CH53_RS01865 PF00146 NADH dehydrogenase CH53_RS01870 PF01568 Molydopterin dinucleotide binding domain CH53_RS01870 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CH53_RS01870 PF00384 Molybdopterin oxidoreductase CH53_RS01870 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CH53_RS01875 PF10531 SLBB domain CH53_RS01875 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CH53_RS01875 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CH53_RS01885 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CH53_RS01885 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CH53_RS01890 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CH53_RS01895 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CH53_RS01900 PF03466 LysR substrate binding domain CH53_RS01900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH53_RS01905 PF00155 Aminotransferase class I and II CH53_RS01920 PF02080 TrkA-C domain CH53_RS01920 PF03600 Citrate transporter CH53_RS01925 PF13419 Haloacid dehalogenase-like hydrolase CH53_RS01930 PF03887 YfbU domain CH53_RS01935 PF04217 Protein of unknown function, DUF412 CH53_RS01940 PF00871 Acetokinase family CH53_RS01945 PF07085 DRTGG domain CH53_RS01945 PF01515 Phosphate acetyl/butaryl transferase CH53_RS01950 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CH53_RS01950 PF00356 Bacterial regulatory proteins, lacI family CH53_RS01955 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CH53_RS01965 PF03611 PTS system sugar-specific permease component CH53_RS01970 PF00293 NUDIX domain CH53_RS01975 PF12850 Calcineurin-like phosphoesterase superfamily domain CH53_RS01980 PF00563 EAL domain CH53_RS01985 PF08338 Domain of unknown function (DUF1731) CH53_RS01985 PF01370 NAD dependent epimerase/dehydratase family CH53_RS01990 PF00005 ABC transporter CH53_RS01995 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS02000 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS02005 PF00497 Bacterial extracellular solute-binding proteins, family 3 CH53_RS02010 PF02441 Flavoprotein CH53_RS02015 PF00156 Phosphoribosyl transferase domain CH53_RS02020 PF02674 Colicin V production protein CH53_RS02025 PF05036 Sporulation related domain CH53_RS02030 PF08245 Mur ligase middle domain CH53_RS02030 PF02875 Mur ligase family, glutamate ligase domain CH53_RS02035 PF01039 Carboxyl transferase domain CH53_RS02035 PF17848 Acetyl-coA carboxylase zinc finger domain CH53_RS02040 PF09335 SNARE associated Golgi protein CH53_RS02045 PF01416 tRNA pseudouridine synthase CH53_RS02050 PF02774 Semialdehyde dehydrogenase, dimerisation domain CH53_RS02050 PF01118 Semialdehyde dehydrogenase, NAD binding domain CH53_RS02055 PF11890 Domain of unknown function (DUF3410) CH53_RS02055 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CH53_RS02055 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CH53_RS02075 PF00155 Aminotransferase class I and II CH53_RS02080 PF00578 AhpC/TSA family CH53_RS02090 PF02683 Cytochrome C biogenesis protein transmembrane region CH53_RS02090 PF11412 Disulphide bond corrector protein DsbC CH53_RS02105 PF03600 Citrate transporter CH53_RS02110 PF00328 Histidine phosphatase superfamily (branch 2) CH53_RS02115 PF01177 Asp/Glu/Hydantoin racemase CH53_RS02120 PF00072 Response regulator receiver domain CH53_RS02120 PF00990 Diguanylate cyclase, GGDEF domain CH53_RS02125 PF02801 Beta-ketoacyl synthase, C-terminal domain CH53_RS02125 PF00109 Beta-ketoacyl synthase, N-terminal domain CH53_RS02130 PF01266 FAD dependent oxidoreductase CH53_RS02130 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CH53_RS02135 PF08891 YfcL protein CH53_RS02140 PF04315 Elongation factor P hydroxylase CH53_RS02145 PF01925 Sulfite exporter TauE/SafE CH53_RS02150 PF03411 Penicillin-insensitive murein endopeptidase CH53_RS02155 PF01264 Chorismate synthase CH53_RS02160 PF05175 Methyltransferase small domain CH53_RS02165 PF01713 Smr domain CH53_RS02170 PF00300 Histidine phosphatase superfamily (branch 1) CH53_RS02175 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CH53_RS02175 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CH53_RS02175 PF00378 Enoyl-CoA hydratase/isomerase CH53_RS02180 PF02803 Thiolase, C-terminal domain CH53_RS02180 PF00108 Thiolase, N-terminal domain CH53_RS02185 PF04175 Protein of unknown function (DUF406) CH53_RS02190 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CH53_RS02195 PF04333 MlaA lipoprotein CH53_RS02200 PF03918 Cytochrome C biogenesis protein CH53_RS02205 PF03918 Cytochrome C biogenesis protein CH53_RS02210 PF08534 Redoxin CH53_RS02215 PF01578 Cytochrome C assembly protein CH53_RS02215 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CH53_RS02220 PF03100 CcmE CH53_RS02225 PF04995 Heme exporter protein D (CcmD) CH53_RS02230 PF01578 Cytochrome C assembly protein CH53_RS02235 PF03379 CcmB protein CH53_RS02240 PF00005 ABC transporter CH53_RS02250 PF03831 PhnA domain CH53_RS02250 PF08274 PhnA Zinc-Ribbon CH53_RS02260 PF13356 Arm DNA-binding domain CH53_RS02260 PF00589 Phage integrase family CH53_RS02260 PF14659 Phage integrase, N-terminal SAM-like domain CH53_RS02300 PF03551 Transcriptional regulator PadR-like family CH53_RS02310 PF00232 Glycosyl hydrolase family 1 CH53_RS02315 PF02378 Phosphotransferase system, EIIC CH53_RS02315 PF00367 phosphotransferase system, EIIB CH53_RS02320 PF00356 Bacterial regulatory proteins, lacI family CH53_RS02325 PF03553 Na+/H+ antiporter family CH53_RS02330 PF04264 YceI-like domain CH53_RS02335 PF01292 Prokaryotic cytochrome b561 CH53_RS02345 PF01053 Cys/Met metabolism PLP-dependent enzyme CH53_RS02350 PF03313 Serine dehydratase alpha chain CH53_RS02365 PF00005 ABC transporter CH53_RS02370 PF02405 Permease MlaE CH53_RS02375 PF07690 Major Facilitator Superfamily CH53_RS02385 PF07969 Amidohydrolase family CH53_RS02390 PF00324 Amino acid permease CH53_RS02395 PF13406 Transglycosylase SLT domain CH53_RS02405 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS02410 PF00005 ABC transporter CH53_RS02420 PF04966 Carbohydrate-selective porin, OprB family CH53_RS02425 PF00232 Glycosyl hydrolase family 1 CH53_RS02430 PF02378 Phosphotransferase system, EIIC CH53_RS02430 PF00367 phosphotransferase system, EIIB CH53_RS02430 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CH53_RS02435 PF00874 PRD domain CH53_RS02435 PF03123 CAT RNA binding domain CH53_RS02440 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CH53_RS02440 PF00384 Molybdopterin oxidoreductase CH53_RS02440 PF01568 Molydopterin dinucleotide binding domain CH53_RS02445 PF13247 4Fe-4S dicluster domain CH53_RS02445 PF12800 4Fe-4S binding domain CH53_RS02450 PF04976 DMSO reductase anchor subunit (DmsC) CH53_RS02455 PF02613 Nitrate reductase delta subunit CH53_RS02470 PF01292 Prokaryotic cytochrome b561 CH53_RS02475 PF00155 Aminotransferase class I and II CH53_RS02485 PF07350 Protein of unknown function (DUF1479) CH53_RS02490 PF06580 Histidine kinase CH53_RS02490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH53_RS02490 PF07694 5TMR of 5TMR-LYT CH53_RS02495 PF00072 Response regulator receiver domain CH53_RS02495 PF04397 LytTr DNA-binding domain CH53_RS02500 PF07690 Major Facilitator Superfamily CH53_RS02505 PF02685 Glucokinase CH53_RS02515 PF03466 LysR substrate binding domain CH53_RS02515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH53_RS02520 PF00248 Aldo/keto reductase family CH53_RS02530 PF01566 Natural resistance-associated macrophage protein CH53_RS02535 PF01773 Na+ dependent nucleoside transporter N-terminus CH53_RS02535 PF07662 Na+ dependent nucleoside transporter C-terminus CH53_RS02535 PF07670 Nucleoside recognition CH53_RS02560 PF00749 tRNA synthetases class I (E and Q), catalytic domain CH53_RS02590 PF12843 Putative quorum-sensing-regulated virulence factor CH53_RS02595 PF00533 BRCA1 C Terminus (BRCT) domain CH53_RS02595 PF03120 NAD-dependent DNA ligase OB-fold domain CH53_RS02595 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CH53_RS02595 PF01653 NAD-dependent DNA ligase adenylation domain CH53_RS02595 PF12826 Helix-hairpin-helix motif CH53_RS02600 PF04354 ZipA, C-terminal FtsZ-binding domain CH53_RS02610 PF00291 Pyridoxal-phosphate dependent enzyme CH53_RS02615 PF00381 PTS HPr component phosphorylation site CH53_RS02620 PF02896 PEP-utilising enzyme, TIM barrel domain CH53_RS02620 PF00391 PEP-utilising enzyme, mobile domain CH53_RS02620 PF05524 PEP-utilising enzyme, N-terminal CH53_RS02625 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CH53_RS02630 PF00672 HAMP domain CH53_RS02630 PF00512 His Kinase A (phospho-acceptor) domain CH53_RS02630 PF16527 Two-component sensor protein CpxA, periplasmic domain CH53_RS02630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH53_RS02635 PF00072 Response regulator receiver domain CH53_RS02635 PF00486 Transcriptional regulatory protein, C terminal CH53_RS02640 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CH53_RS02645 PF12704 MacB-like periplasmic core domain CH53_RS02645 PF02687 FtsX-like permease family CH53_RS02645 PF00005 ABC transporter CH53_RS02650 PF01061 ABC-2 type transporter CH53_RS02655 PF00005 ABC transporter CH53_RS02670 PF05159 Capsule polysaccharide biosynthesis protein CH53_RS02675 PF05159 Capsule polysaccharide biosynthesis protein CH53_RS02680 PF02563 Polysaccharide biosynthesis/export protein CH53_RS02680 PF10531 SLBB domain CH53_RS02690 PF00291 Pyridoxal-phosphate dependent enzyme CH53_RS02695 PF00005 ABC transporter CH53_RS02700 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS02705 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS02715 PF04261 Dyp-type peroxidase family CH53_RS02720 PF06572 Protein of unknown function (DUF1131) CH53_RS02725 PF04076 Bacterial OB fold (BOF) protein CH53_RS02730 PF00583 Acetyltransferase (GNAT) family CH53_RS02735 PF01218 Coproporphyrinogen III oxidase CH53_RS02740 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CH53_RS02745 PF00390 Malic enzyme, N-terminal domain CH53_RS02745 PF03949 Malic enzyme, NAD binding domain CH53_RS02745 PF01515 Phosphate acetyl/butaryl transferase CH53_RS02755 PF00293 NUDIX domain CH53_RS02760 PF05016 ParE toxin of type II toxin-antitoxin system, parDE CH53_RS02770 PF03264 NapC/NirT cytochrome c family, N-terminal region CH53_RS02775 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) CH53_RS02780 PF10518 TAT (twin-arginine translocation) pathway signal sequence CH53_RS02780 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CH53_RS02780 PF01568 Molydopterin dinucleotide binding domain CH53_RS02780 PF00384 Molybdopterin oxidoreductase CH53_RS02785 PF03927 NapD protein CH53_RS02790 PF12800 4Fe-4S binding domain CH53_RS02790 PF00037 4Fe-4S binding domain CH53_RS02790 PF13187 4Fe-4S dicluster domain CH53_RS02795 PF00196 Bacterial regulatory proteins, luxR family CH53_RS02795 PF00072 Response regulator receiver domain CH53_RS02805 PF00873 AcrB/AcrD/AcrF family CH53_RS02815 PF03960 ArsC family CH53_RS02820 PF01546 Peptidase family M20/M25/M40 CH53_RS02820 PF07687 Peptidase dimerisation domain CH53_RS02825 PF02557 D-alanyl-D-alanine carboxypeptidase CH53_RS02830 PF13980 Uncharacterised protein family (UPF0370) CH53_RS02835 PF02230 Phospholipase/Carboxylesterase CH53_RS02845 PF13718 GNAT acetyltransferase 2 CH53_RS02845 PF05127 Helicase CH53_RS02845 PF17176 tRNA-binding domain CH53_RS02850 PF04284 Protein of unknown function (DUF441) CH53_RS02855 PF04228 Putative neutral zinc metallopeptidase CH53_RS02860 PF01259 SAICAR synthetase CH53_RS02865 PF06804 NlpB/DapX lipoprotein CH53_RS02870 PF00701 Dihydrodipicolinate synthetase family CH53_RS02875 PF01842 ACT domain CH53_RS02880 PF00578 AhpC/TSA family CH53_RS02885 PF01594 AI-2E family transporter CH53_RS02890 PF01435 Peptidase family M48 CH53_RS02890 PF07720 Tetratricopeptide repeat CH53_RS02895 PF03960 ArsC family CH53_RS02900 PF00308 Bacterial dnaA protein CH53_RS02905 PF00860 Permease family CH53_RS02915 PF00586 AIR synthase related protein, N-terminal domain CH53_RS02915 PF02769 AIR synthase related protein, C-terminal domain CH53_RS02920 PF00551 Formyl transferase CH53_RS02925 PF13302 Acetyltransferase (GNAT) domain CH53_RS02935 PF00005 ABC transporter CH53_RS02940 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS02945 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS02950 PF13090 Polyphosphate kinase C-terminal domain 2 CH53_RS02950 PF02503 Polyphosphate kinase middle domain CH53_RS02950 PF17941 Polyphosphate kinase C-terminal domain 1 CH53_RS02950 PF13089 Polyphosphate kinase N-terminal domain CH53_RS02955 PF02541 Ppx/GppA phosphatase family CH53_RS02965 PF03448 MgtE intracellular N domain CH53_RS02965 PF01769 Divalent cation transporter CH53_RS02965 PF00571 CBS domain CH53_RS02975 PF00012 Hsp70 protein CH53_RS02980 PF13533 Biotin-lipoyl like CH53_RS02985 PF00873 AcrB/AcrD/AcrF family CH53_RS02990 PF00873 AcrB/AcrD/AcrF family CH53_RS02995 PF00512 His Kinase A (phospho-acceptor) domain CH53_RS02995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH53_RS02995 PF00672 HAMP domain CH53_RS03000 PF00486 Transcriptional regulatory protein, C terminal CH53_RS03000 PF00072 Response regulator receiver domain CH53_RS03005 PF07411 Domain of unknown function (DUF1508) CH53_RS03010 PF01136 Peptidase family U32 CH53_RS03010 PF16325 Peptidase family U32 C-terminal domain CH53_RS03015 PF00781 Diacylglycerol kinase catalytic domain CH53_RS03020 PF03608 PTS system enzyme II sorbitol-specific factor CH53_RS03025 PF07663 Sorbitol phosphotransferase enzyme II C-terminus CH53_RS03025 PF03612 Sorbitol phosphotransferase enzyme II N-terminus CH53_RS03030 PF03829 PTS system glucitol/sorbitol-specific IIA component CH53_RS03035 PF00106 short chain dehydrogenase CH53_RS03040 PF06923 Glucitol operon activator protein (GutM) CH53_RS03045 PF00455 DeoR C terminal sensor domain CH53_RS03045 PF08220 DeoR-like helix-turn-helix domain CH53_RS03050 PF00571 CBS domain CH53_RS03050 PF01380 SIS domain CH53_RS03065 PF08543 Phosphomethylpyrimidine kinase CH53_RS03085 PF02540 NAD synthase CH53_RS03085 PF00958 GMP synthase C terminal domain CH53_RS03085 PF00117 Glutamine amidotransferase class-I CH53_RS03090 PF00478 IMP dehydrogenase / GMP reductase domain CH53_RS03090 PF00571 CBS domain CH53_RS03095 PF13742 OB-fold nucleic acid binding domain CH53_RS03095 PF02601 Exonuclease VII, large subunit CH53_RS03100 PF07191 zinc-ribbons CH53_RS03110 PF01926 50S ribosome-binding GTPase CH53_RS03110 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CH53_RS03115 PF13360 PQQ-like domain CH53_RS03120 PF09976 Tetratricopeptide repeat-like domain CH53_RS03125 PF13393 Histidyl-tRNA synthetase CH53_RS03125 PF03129 Anticodon binding domain CH53_RS03130 PF04551 GcpE protein CH53_RS03135 PF13464 Domain of unknown function (DUF4115) CH53_RS03145 PF04055 Radical SAM superfamily CH53_RS03150 PF00334 Nucleoside diphosphate kinase CH53_RS03160 PF06832 Penicillin-Binding Protein C-terminus Family CH53_RS03160 PF00912 Transglycosylase CH53_RS03160 PF00905 Penicillin binding protein transpeptidase domain CH53_RS03165 PF01835 MG2 domain CH53_RS03165 PF17962 Bacterial macroglobulin domain 6 CH53_RS03165 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain CH53_RS03165 PF07678 A-macroglobulin TED domain CH53_RS03165 PF00207 Alpha-2-macroglobulin family CH53_RS03165 PF11974 Bacterial alpha-2-macroglobulin MG3 domain CH53_RS03165 PF07703 Alpha-2-macroglobulin bait region domain CH53_RS03165 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain CH53_RS03165 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain CH53_RS03170 PF03797 Autotransporter beta-domain CH53_RS03170 PF16168 Adhesin of bacterial autotransporter system, probable stalk CH53_RS03170 PF03212 Pertactin CH53_RS03175 PF14581 SseB protein C-terminal domain CH53_RS03175 PF07179 SseB protein N-terminal domain CH53_RS03180 PF12404 Peptidase CH53_RS03180 PF00883 Cytosol aminopeptidase family, catalytic domain CH53_RS03185 PF04384 Iron-sulphur cluster assembly CH53_RS03190 PF00111 2Fe-2S iron-sulfur cluster binding domain CH53_RS03195 PF00012 Hsp70 protein CH53_RS03200 PF00226 DnaJ domain CH53_RS03200 PF07743 HSCB C-terminal oligomerisation domain CH53_RS03205 PF01521 Iron-sulphur cluster biosynthesis CH53_RS03210 PF01592 NifU-like N terminal domain CH53_RS03215 PF00266 Aminotransferase class-V CH53_RS03220 PF02082 Transcriptional regulator CH53_RS03225 PF00588 SpoU rRNA Methylase family CH53_RS03230 PF00459 Inositol monophosphatase family CH53_RS03235 PF03824 High-affinity nickel-transport protein CH53_RS03240 PF06226 Protein of unknown function (DUF1007) CH53_RS03245 PF00874 PRD domain CH53_RS03250 PF12832 MFS_1 like family CH53_RS03255 PF00464 Serine hydroxymethyltransferase CH53_RS03260 PF00042 Globin CH53_RS03260 PF00175 Oxidoreductase NAD-binding domain CH53_RS03260 PF00970 Oxidoreductase FAD-binding domain CH53_RS03265 PF14503 YhfZ C-terminal domain CH53_RS03265 PF14502 Helix-turn-helix domain CH53_RS03275 PF01168 Alanine racemase, N-terminal domain CH53_RS03280 PF02126 Phosphotriesterase family CH53_RS03285 PF10941 Protein of unknown function DUF2620 CH53_RS03290 PF10797 Protein of unknown function CH53_RS03295 PF00543 Nitrogen regulatory protein P-II CH53_RS03300 PF00795 Carbon-nitrogen hydrolase CH53_RS03300 PF02540 NAD synthase CH53_RS03305 PF00072 Response regulator receiver domain CH53_RS03305 PF00158 Sigma-54 interaction domain CH53_RS03310 PF13942 YfhG lipoprotein CH53_RS03315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH53_RS03315 PF00512 His Kinase A (phospho-acceptor) domain CH53_RS03325 PF02769 AIR synthase related protein, C-terminal domain CH53_RS03325 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CH53_RS03325 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CH53_RS03330 PF01464 Transglycosylase SLT domain CH53_RS03330 PF00497 Bacterial extracellular solute-binding proteins, family 3 CH53_RS03335 PF14437 MafB19-like deaminase CH53_RS03350 PF01380 SIS domain CH53_RS03355 PF01418 Helix-turn-helix domain, rpiR family CH53_RS03355 PF01380 SIS domain CH53_RS03360 PF12838 4Fe-4S dicluster domain CH53_RS03365 PF01648 4'-phosphopantetheinyl transferase superfamily CH53_RS03370 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CH53_RS03375 PF02565 Recombination protein O C terminal CH53_RS03375 PF11967 Recombination protein O N terminal CH53_RS03380 PF07650 KH domain CH53_RS03380 PF01926 50S ribosome-binding GTPase CH53_RS03385 PF14622 Ribonuclease-III-like CH53_RS03385 PF00035 Double-stranded RNA binding motif CH53_RS03390 PF10502 Signal peptidase, peptidase S26 CH53_RS03395 PF03144 Elongation factor Tu domain 2 CH53_RS03395 PF00009 Elongation factor Tu GTP binding domain CH53_RS03395 PF06421 GTP-binding protein LepA C-terminus CH53_RS03395 PF00679 Elongation factor G C-terminus CH53_RS03410 PF17188 MucB/RseB C-terminal domain CH53_RS03410 PF03888 MucB/RseB N-terminal domain CH53_RS03415 PF03872 Anti sigma-E protein RseA, N-terminal domain CH53_RS03415 PF03873 Anti sigma-E protein RseA, C-terminal domain CH53_RS03420 PF08281 Sigma-70, region 4 CH53_RS03420 PF04542 Sigma-70 region 2 CH53_RS03425 PF02910 Fumarate reductase flavoprotein C-term CH53_RS03425 PF00890 FAD binding domain CH53_RS03430 PF05175 Methyltransferase small domain CH53_RS03435 PF00271 Helicase conserved C-terminal domain CH53_RS03435 PF00270 DEAD/DEAH box helicase CH53_RS03440 PF12796 Ankyrin repeats (3 copies) CH53_RS03450 PF01228 Glycine radical CH53_RS03455 PF03167 Uracil DNA glycosylase superfamily CH53_RS03460 PF01025 GrpE CH53_RS03465 PF01513 ATP-NAD kinase CH53_RS03470 PF02463 RecF/RecN/SMC N terminal domain CH53_RS03475 PF04355 SmpA / OmlA family CH53_RS03480 PF03658 RnfH family Ubiquitin CH53_RS03485 PF03364 Polyketide cyclase / dehydrase and lipid transport CH53_RS03490 PF01668 SmpB protein CH53_RS03540 PF04794 YdjC-like protein CH53_RS03545 PF07883 Cupin domain CH53_RS03545 PF12833 Helix-turn-helix domain CH53_RS03550 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CH53_RS03555 PF00232 Glycosyl hydrolase family 1 CH53_RS03560 PF02378 Phosphotransferase system, EIIC CH53_RS03565 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CH53_RS03570 PF07995 Glucose / Sorbosone dehydrogenase CH53_RS03575 PF00248 Aldo/keto reductase family CH53_RS03580 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CH53_RS03585 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CH53_RS03590 PF07885 Ion channel CH53_RS03590 PF02254 TrkA-N domain CH53_RS03595 PF06411 HdeA/HdeB family CH53_RS03600 PF03824 High-affinity nickel-transport protein CH53_RS03605 PF03253 Urea transporter CH53_RS03610 PF01774 UreD urease accessory protein CH53_RS03615 PF02492 CobW/HypB/UreG, nucleotide-binding domain CH53_RS03620 PF01730 UreF CH53_RS03625 PF05194 UreE urease accessory protein, C-terminal domain CH53_RS03625 PF02814 UreE urease accessory protein, N-terminal domain CH53_RS03630 PF00449 Urease alpha-subunit, N-terminal domain CH53_RS03630 PF01979 Amidohydrolase family CH53_RS03635 PF00699 Urease beta subunit CH53_RS03640 PF00547 Urease, gamma subunit CH53_RS03645 PF00005 ABC transporter CH53_RS03650 PF17845 FbpC C-terminal regulatory nucleotide binding domain CH53_RS03650 PF00005 ABC transporter CH53_RS03655 PF12911 N-terminal TM domain of oligopeptide transport permease C CH53_RS03655 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS03660 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS03665 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CH53_RS03685 PF01965 DJ-1/PfpI family CH53_RS03690 PF00313 'Cold-shock' DNA-binding domain CH53_RS03700 PF06711 Protein of unknown function (DUF1198) CH53_RS03705 PF09400 Protein of unknown function (DUF2002) CH53_RS03710 PF12833 Helix-turn-helix domain CH53_RS03720 PF06392 Acid shock protein repeat CH53_RS03725 PF05957 Bacterial protein of unknown function (DUF883) CH53_RS03735 PF00462 Glutaredoxin CH53_RS03740 PF07972 NrdI Flavodoxin like CH53_RS03745 PF02867 Ribonucleotide reductase, barrel domain CH53_RS03745 PF08343 Ribonucleotide reductase N-terminal CH53_RS03745 PF00317 Ribonucleotide reductase, all-alpha domain CH53_RS03750 PF00268 Ribonucleotide reductase, small chain CH53_RS03755 PF00005 ABC transporter CH53_RS03755 PF00571 CBS domain CH53_RS03760 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS03765 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CH53_RS03770 PF07979 Intimin C-type lectin domain CH53_RS03770 PF11924 Inverse autotransporter, beta-domain CH53_RS03770 PF02369 Bacterial Ig-like domain (group 1) CH53_RS03770 PF09134 Invasin, domain 3 CH53_RS03785 PF09134 Invasin, domain 3 CH53_RS03785 PF07979 Intimin C-type lectin domain CH53_RS03785 PF11924 Inverse autotransporter, beta-domain CH53_RS03785 PF02369 Bacterial Ig-like domain (group 1) CH53_RS03795 PF00929 Exonuclease CH53_RS03800 PF00075 RNase H CH53_RS03805 PF08241 Methyltransferase domain CH53_RS03810 PF16123 Hydroxyacylglutathione hydrolase C-terminus CH53_RS03810 PF00753 Metallo-beta-lactamase superfamily CH53_RS03815 PF01476 LysM domain CH53_RS03815 PF01464 Transglycosylase SLT domain CH53_RS03820 PF03372 Endonuclease/Exonuclease/phosphatase family CH53_RS03825 PF07690 Major Facilitator Superfamily CH53_RS03830 PF03466 LysR substrate binding domain CH53_RS03830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH53_RS03840 PF02801 Beta-ketoacyl synthase, C-terminal domain CH53_RS03840 PF00109 Beta-ketoacyl synthase, N-terminal domain CH53_RS03855 PF02801 Beta-ketoacyl synthase, C-terminal domain CH53_RS03855 PF00109 Beta-ketoacyl synthase, N-terminal domain CH53_RS03885 PF07977 FabA-like domain CH53_RS03900 PF00550 Phosphopantetheine attachment site CH53_RS03955 PF10431 C-terminal, D2-small domain, of ClpB protein CH53_RS03955 PF00004 ATPase family associated with various cellular activities (AAA) CH53_RS03955 PF07724 AAA domain (Cdc48 subfamily) CH53_RS03955 PF02861 Clp amino terminal domain, pathogenicity island component CH53_RS03955 PF17871 AAA lid domain CH53_RS03960 PF02578 Multi-copper polyphenol oxidoreductase laccase CH53_RS03965 PF00849 RNA pseudouridylate synthase CH53_RS03965 PF01479 S4 domain CH53_RS03970 PF13525 Outer membrane lipoprotein CH53_RS03975 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CH53_RS03980 PF00800 Prephenate dehydratase CH53_RS03980 PF01817 Chorismate mutase type II CH53_RS03985 PF02153 Prephenate dehydrogenase CH53_RS03985 PF01817 Chorismate mutase type II CH53_RS03990 PF00793 DAHP synthetase I family CH53_RS03995 PF00072 Response regulator receiver domain CH53_RS03995 PF04397 LytTr DNA-binding domain CH53_RS04000 PF03605 Anaerobic c4-dicarboxylate membrane transporter CH53_RS04005 PF04338 Protein of unknown function, DUF481 CH53_RS04010 PF01245 Ribosomal protein L19 CH53_RS04015 PF01746 tRNA (Guanine-1)-methyltransferase CH53_RS04020 PF01782 RimM N-terminal domain CH53_RS04020 PF05239 PRC-barrel domain CH53_RS04025 PF00886 Ribosomal protein S16 CH53_RS04030 PF02881 SRP54-type protein, helical bundle domain CH53_RS04030 PF00448 SRP54-type protein, GTPase domain CH53_RS04030 PF02978 Signal peptide binding domain CH53_RS04035 PF01578 Cytochrome C assembly protein CH53_RS04040 PF01595 Cyclin M transmembrane N-terminal domain CH53_RS04040 PF03471 Transporter associated domain CH53_RS04040 PF00571 CBS domain CH53_RS04045 PF02664 S-Ribosylhomocysteinase (LuxS) CH53_RS04050 PF04262 Glutamate-cysteine ligase CH53_RS04055 PF09335 SNARE associated Golgi protein CH53_RS04060 PF13419 Haloacid dehalogenase-like hydrolase CH53_RS04085 PF02599 Global regulator protein family CH53_RS04090 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CH53_RS04090 PF02272 DHHA1 domain CH53_RS04090 PF01411 tRNA synthetases class II (A) CH53_RS04095 PF02631 RecX family CH53_RS04100 PF00154 recA bacterial DNA recombination protein CH53_RS04105 PF02464 Competence-damaged protein CH53_RS04110 PF07690 Major Facilitator Superfamily CH53_RS04125 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CH53_RS04125 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CH53_RS04130 PF02780 Transketolase, C-terminal domain CH53_RS04130 PF02779 Transketolase, pyrimidine binding domain CH53_RS04135 PF00456 Transketolase, thiamine diphosphate binding domain CH53_RS04140 PF02653 Branched-chain amino acid transport system / permease component CH53_RS04145 PF00005 ABC transporter CH53_RS04155 PF13407 Periplasmic binding protein domain CH53_RS04165 PF02613 Nitrate reductase delta subunit CH53_RS04170 PF04976 DMSO reductase anchor subunit (DmsC) CH53_RS04175 PF13247 4Fe-4S dicluster domain CH53_RS04175 PF12800 4Fe-4S binding domain CH53_RS04180 PF01568 Molydopterin dinucleotide binding domain CH53_RS04180 PF00384 Molybdopterin oxidoreductase CH53_RS04180 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CH53_RS04185 PF00465 Iron-containing alcohol dehydrogenase CH53_RS04190 PF00596 Class II Aldolase and Adducin N-terminal domain CH53_RS04195 PF07690 Major Facilitator Superfamily CH53_RS04200 PF07881 L-fucose isomerase, first N-terminal domain CH53_RS04200 PF07882 L-fucose isomerase, second N-terminal domain CH53_RS04200 PF02952 L-fucose isomerase, C-terminal domain CH53_RS04205 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CH53_RS04205 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CH53_RS04210 PF05025 RbsD / FucU transport protein family CH53_RS04215 PF00455 DeoR C terminal sensor domain CH53_RS04215 PF08220 DeoR-like helix-turn-helix domain CH53_RS04220 PF00596 Class II Aldolase and Adducin N-terminal domain CH53_RS04225 PF08220 DeoR-like helix-turn-helix domain CH53_RS04225 PF00455 DeoR C terminal sensor domain CH53_RS04235 PF00005 ABC transporter CH53_RS04240 PF02653 Branched-chain amino acid transport system / permease component CH53_RS04245 PF02653 Branched-chain amino acid transport system / permease component CH53_RS04250 PF01261 Xylose isomerase-like TIM barrel CH53_RS04255 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CH53_RS04255 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CH53_RS04260 PF05683 Fumarase C-terminus CH53_RS04260 PF05681 Fumarate hydratase (Fumerase) CH53_RS04265 PF13458 Periplasmic binding protein CH53_RS04270 PF02653 Branched-chain amino acid transport system / permease component CH53_RS04275 PF02653 Branched-chain amino acid transport system / permease component CH53_RS04275 PF11862 Domain of unknown function (DUF3382) CH53_RS04280 PF00005 ABC transporter CH53_RS04285 PF00005 ABC transporter CH53_RS04305 PF00795 Carbon-nitrogen hydrolase CH53_RS04310 PF13936 Helix-turn-helix domain CH53_RS04310 PF04198 Putative sugar-binding domain CH53_RS04315 PF03610 PTS system fructose IIA component CH53_RS04320 PF03830 PTS system sorbose subfamily IIB component CH53_RS04325 PF03609 PTS system sorbose-specific iic component CH53_RS04330 PF03613 PTS system mannose/fructose/sorbose family IID component CH53_RS04335 PF08240 Alcohol dehydrogenase GroES-like domain CH53_RS04335 PF00107 Zinc-binding dehydrogenase CH53_RS04340 PF01022 Bacterial regulatory protein, arsR family CH53_RS04345 PF03764 Elongation factor G, domain IV CH53_RS04345 PF14492 Elongation Factor G, domain II CH53_RS04345 PF00679 Elongation factor G C-terminus CH53_RS04345 PF03144 Elongation factor Tu domain 2 CH53_RS04345 PF00009 Elongation factor Tu GTP binding domain CH53_RS04350 PF02705 K+ potassium transporter CH53_RS04355 PF00291 Pyridoxal-phosphate dependent enzyme CH53_RS04360 PF02447 GntP family permease CH53_RS04365 PF03466 LysR substrate binding domain CH53_RS04365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH53_RS04370 PF00005 ABC transporter CH53_RS04370 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CH53_RS04375 PF00005 ABC transporter CH53_RS04375 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CH53_RS04380 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS04380 PF12911 N-terminal TM domain of oligopeptide transport permease C CH53_RS04385 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS04390 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CH53_RS04395 PF13378 Enolase C-terminal domain-like CH53_RS04395 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CH53_RS04415 PF02801 Beta-ketoacyl synthase, C-terminal domain CH53_RS04415 PF00109 Beta-ketoacyl synthase, N-terminal domain CH53_RS04420 PF02321 Outer membrane efflux protein CH53_RS04425 PF02687 FtsX-like permease family CH53_RS04425 PF00005 ABC transporter CH53_RS04425 PF12704 MacB-like periplasmic core domain CH53_RS04430 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CH53_RS04435 PF00005 ABC transporter CH53_RS04435 PF03412 Peptidase C39 family CH53_RS04435 PF00664 ABC transporter transmembrane region CH53_RS04445 PF00085 Thioredoxin CH53_RS04445 PF01323 DSBA-like thioredoxin domain CH53_RS04460 PF00419 Fimbrial protein CH53_RS04465 PF00419 Fimbrial protein CH53_RS04480 PF02753 Pili assembly chaperone PapD, C-terminal domain CH53_RS04480 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CH53_RS04485 PF13954 PapC N-terminal domain CH53_RS04485 PF00577 Outer membrane usher protein CH53_RS04485 PF13953 PapC C-terminal domain CH53_RS04490 PF00419 Fimbrial protein CH53_RS04495 PF00419 Fimbrial protein CH53_RS04570 PF01026 TatD related DNase CH53_RS04595 PF00488 MutS domain V CH53_RS04595 PF05190 MutS family domain IV CH53_RS04595 PF05192 MutS domain III CH53_RS04595 PF05188 MutS domain II CH53_RS04595 PF01624 MutS domain I CH53_RS04600 PF00140 Sigma-70 factor, region 1.2 CH53_RS04600 PF04542 Sigma-70 region 2 CH53_RS04600 PF04539 Sigma-70 region 3 CH53_RS04600 PF04545 Sigma-70, region 4 CH53_RS04605 PF01476 LysM domain CH53_RS04605 PF01551 Peptidase family M23 CH53_RS04615 PF01975 Survival protein SurE CH53_RS04620 PF01142 tRNA pseudouridine synthase D (TruD) CH53_RS04625 PF02542 YgbB family CH53_RS04630 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CH53_RS04635 PF04977 Septum formation initiator CH53_RS04640 PF00497 Bacterial extracellular solute-binding proteins, family 3 CH53_RS04645 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS04650 PF00005 ABC transporter CH53_RS04655 PF12084 Protein of unknown function (DUF3561) CH53_RS04665 PF00009 Elongation factor Tu GTP binding domain CH53_RS04670 PF01507 Phosphoadenosine phosphosulfate reductase family CH53_RS04675 PF10414 Sirohaem synthase dimerisation region CH53_RS04675 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CH53_RS04675 PF14824 Sirohaem biosynthesis protein central CH53_RS04680 PF04389 Peptidase family M28 CH53_RS04695 PF01507 Phosphoadenosine phosphosulfate reductase family CH53_RS04700 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CH53_RS04700 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CH53_RS04705 PF00667 FAD binding domain CH53_RS04705 PF00258 Flavodoxin CH53_RS04705 PF00175 Oxidoreductase NAD-binding domain CH53_RS04710 PF01242 6-pyruvoyl tetrahydropterin synthase CH53_RS04715 PF04055 Radical SAM superfamily CH53_RS04720 PF00080 Copper/zinc superoxide dismutase (SODC) CH53_RS04725 PF03952 Enolase, N-terminal domain CH53_RS04725 PF00113 Enolase, C-terminal TIM barrel domain CH53_RS04730 PF06418 CTP synthase N-terminus CH53_RS04730 PF00117 Glutamine amidotransferase class-I CH53_RS04735 PF03819 MazG nucleotide pyrophosphohydrolase domain CH53_RS04740 PF13291 ACT domain CH53_RS04740 PF02824 TGS domain CH53_RS04740 PF04607 Region found in RelA / SpoT proteins CH53_RS04745 PF01938 TRAM domain CH53_RS04745 PF05958 tRNA (Uracil-5-)-methyltransferase CH53_RS04750 PF01627 Hpt domain CH53_RS04750 PF00072 Response regulator receiver domain CH53_RS04750 PF00512 His Kinase A (phospho-acceptor) domain CH53_RS04750 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CH53_RS04750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH53_RS04750 PF00672 HAMP domain CH53_RS04755 PF00595 PDZ domain CH53_RS04760 PF13286 Phosphohydrolase-associated domain CH53_RS04760 PF01966 HD domain CH53_RS04765 PF01048 Phosphorylase superfamily CH53_RS04770 PF01497 Periplasmic binding protein CH53_RS04775 PF03458 UPF0126 domain CH53_RS04780 PF01521 Iron-sulphur cluster biosynthesis CH53_RS04785 PF00654 Voltage gated chloride channel CH53_RS04790 PF00202 Aminotransferase class-III CH53_RS04795 PF01032 FecCD transport family CH53_RS04800 PF01497 Periplasmic binding protein CH53_RS04805 PF00005 ABC transporter CH53_RS04810 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal CH53_RS04810 PF00912 Transglycosylase CH53_RS04810 PF14814 Bifunctional transglycosylase second domain CH53_RS04810 PF00905 Penicillin binding protein transpeptidase domain CH53_RS04815 PF04408 Helicase associated domain (HA2) CH53_RS04815 PF00270 DEAD/DEAH box helicase CH53_RS04815 PF08482 ATP-dependent helicase C-terminal CH53_RS04815 PF00271 Helicase conserved C-terminal domain CH53_RS04820 PF02834 LigT like Phosphoesterase CH53_RS04825 PF17746 SfsA N-terminal OB domain CH53_RS04825 PF03749 Sugar fermentation stimulation protein RE domain CH53_RS04830 PF01258 Prokaryotic dksA/traR C4-type zinc finger CH53_RS04835 PF00749 tRNA synthetases class I (E and Q), catalytic domain CH53_RS04840 PF12627 Probable RNA and SrmB- binding site of polymerase A CH53_RS04840 PF12626 Polymerase A arginine-rich C-terminus CH53_RS04840 PF01743 Poly A polymerase head domain CH53_RS04845 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CH53_RS04850 PF02548 Ketopantoate hydroxymethyltransferase CH53_RS04855 PF02569 Pantoate-beta-alanine ligase CH53_RS04860 PF12468 Type III secretion system leucine rich repeat protein CH53_RS04860 PF14496 C-terminal novel E3 ligase, LRR-interacting CH53_RS04865 PF02261 Aspartate decarboxylase CH53_RS04870 PF01522 Polysaccharide deacetylase CH53_RS04875 PF01061 ABC-2 type transporter CH53_RS04880 PF00005 ABC transporter CH53_RS04885 PF00484 Carbonic anhydrase CH53_RS04890 PF00156 Phosphoribosyl transferase domain CH53_RS04895 PF00394 Multicopper oxidase CH53_RS04895 PF07731 Multicopper oxidase CH53_RS04895 PF10518 TAT (twin-arginine translocation) pathway signal sequence CH53_RS04895 PF07732 Multicopper oxidase CH53_RS04900 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) CH53_RS04905 PF17284 Spermidine synthase tetramerisation domain CH53_RS04910 PF02675 S-adenosylmethionine decarboxylase CH53_RS04915 PF00892 EamA-like transporter family CH53_RS04920 PF06062 Uncharacterised protein family (UPF0231) CH53_RS04925 PF11791 Aconitate B N-terminal domain CH53_RS04925 PF06434 Aconitate hydratase 2 N-terminus CH53_RS04925 PF00330 Aconitase family (aconitate hydratase) CH53_RS04930 PF07715 TonB-dependent Receptor Plug Domain CH53_RS04930 PF00593 TonB dependent receptor CH53_RS04940 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CH53_RS04940 PF07992 Pyridine nucleotide-disulphide oxidoreductase CH53_RS04945 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CH53_RS04945 PF00364 Biotin-requiring enzyme CH53_RS04945 PF02817 e3 binding domain CH53_RS04950 PF00456 Transketolase, thiamine diphosphate binding domain CH53_RS04950 PF17831 Pyruvate dehydrogenase E1 component middle domain CH53_RS04955 PF07729 FCD domain CH53_RS04955 PF00392 Bacterial regulatory proteins, gntR family CH53_RS04960 PF00324 Amino acid permease CH53_RS04965 PF17113 Regulatory signalling modulator protein AmpE CH53_RS04970 PF01510 N-acetylmuramoyl-L-alanine amidase CH53_RS04975 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CH53_RS04975 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CH53_RS04980 PF07963 Prokaryotic N-terminal methylation motif CH53_RS04985 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CH53_RS04985 PF00437 Type II/IV secretion system protein CH53_RS04990 PF00482 Type II secretion system (T2SS), protein F CH53_RS04995 PF00478 IMP dehydrogenase / GMP reductase domain CH53_RS05000 PF01121 Dephospho-CoA kinase CH53_RS05005 PF07072 Cell division protein CH53_RS05010 PF03884 DNA gyrase inhibitor YacG CH53_RS05015 PF00293 NUDIX domain CH53_RS05020 PF07516 SecA Wing and Scaffold domain CH53_RS05020 PF01043 SecA preprotein cross-linking domain CH53_RS05020 PF02810 SEC-C motif CH53_RS05020 PF07517 SecA DEAD-like domain CH53_RS05025 PF06558 Secretion monitor precursor protein (SecM) CH53_RS05035 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CH53_RS05040 PF00091 Tubulin/FtsZ family, GTPase domain CH53_RS05040 PF12327 FtsZ family, C-terminal domain CH53_RS05045 PF02491 SHS2 domain inserted in FTSA CH53_RS05050 PF03799 Cell division protein FtsQ CH53_RS05050 PF08478 POTRA domain, FtsQ-type CH53_RS05055 PF01820 D-ala D-ala ligase N-terminus CH53_RS05055 PF07478 D-ala D-ala ligase C-terminus CH53_RS05060 PF01225 Mur ligase family, catalytic domain CH53_RS05060 PF08245 Mur ligase middle domain CH53_RS05060 PF02875 Mur ligase family, glutamate ligase domain CH53_RS05065 PF04101 Glycosyltransferase family 28 C-terminal domain CH53_RS05065 PF03033 Glycosyltransferase family 28 N-terminal domain CH53_RS05070 PF01098 Cell cycle protein CH53_RS05075 PF08245 Mur ligase middle domain CH53_RS05075 PF02875 Mur ligase family, glutamate ligase domain CH53_RS05080 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CH53_RS05080 PF00953 Glycosyl transferase family 4 CH53_RS05085 PF01225 Mur ligase family, catalytic domain CH53_RS05085 PF02875 Mur ligase family, glutamate ligase domain CH53_RS05085 PF08245 Mur ligase middle domain CH53_RS05090 PF08245 Mur ligase middle domain CH53_RS05090 PF01225 Mur ligase family, catalytic domain CH53_RS05090 PF02875 Mur ligase family, glutamate ligase domain CH53_RS05095 PF00905 Penicillin binding protein transpeptidase domain CH53_RS05095 PF03717 Penicillin-binding Protein dimerisation domain CH53_RS05100 PF04999 Cell division protein FtsL CH53_RS05105 PF01795 MraW methylase family CH53_RS05110 PF02381 MraZ protein, putative antitoxin-like CH53_RS05115 PF06610 L-alanine exporter CH53_RS05120 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CH53_RS05120 PF00356 Bacterial regulatory proteins, lacI family CH53_RS05125 PF10369 Small subunit of acetolactate synthase CH53_RS05130 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CH53_RS05130 PF00205 Thiamine pyrophosphate enzyme, central domain CH53_RS05130 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CH53_RS05135 PF00501 AMP-binding enzyme CH53_RS05140 PF03466 LysR substrate binding domain CH53_RS05140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH53_RS05145 PF00682 HMGL-like CH53_RS05145 PF08502 LeuA allosteric (dimerisation) domain CH53_RS05150 PF00180 Isocitrate/isopropylmalate dehydrogenase CH53_RS05155 PF00330 Aconitase family (aconitate hydratase) CH53_RS05160 PF00694 Aconitase C-terminal domain CH53_RS05165 PF01212 Beta-eliminating lyase CH53_RS05170 PF03222 Tryptophan/tyrosine permease family CH53_RS05175 PF07690 Major Facilitator Superfamily CH53_RS05180 PF01228 Glycine radical CH53_RS05180 PF02901 Pyruvate formate lyase-like CH53_RS05185 PF04055 Radical SAM superfamily CH53_RS05190 PF12793 Sugar transport-related sRNA regulator N-term CH53_RS05190 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CH53_RS05200 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS05205 PF00005 ABC transporter CH53_RS05210 PF09335 SNARE associated Golgi protein CH53_RS05220 PF03104 DNA polymerase family B, exonuclease domain CH53_RS05220 PF00136 DNA polymerase family B CH53_RS05225 PF18337 RapA N-terminal Tudor like domain CH53_RS05225 PF18339 RapA N-terminal Tudor like domain 1 CH53_RS05225 PF00176 SNF2 family N-terminal domain CH53_RS05225 PF12137 RNA polymerase recycling family C-terminal CH53_RS05225 PF00271 Helicase conserved C-terminal domain CH53_RS05230 PF00849 RNA pseudouridylate synthase CH53_RS05235 PF00226 DnaJ domain CH53_RS05235 PF05099 Tellurite resistance protein TerB CH53_RS05240 PF03968 OstA-like protein CH53_RS05240 PF04453 LPS transport system D CH53_RS05245 PF00639 PPIC-type PPIASE domain CH53_RS05245 PF09312 SurA N-terminal domain CH53_RS05250 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CH53_RS05255 PF00398 Ribosomal RNA adenine dimethylase CH53_RS05260 PF04379 ApaG domain CH53_RS05265 PF00149 Calcineurin-like phosphoesterase CH53_RS05270 PF00186 Dihydrofolate reductase CH53_RS05275 PF12821 Threonine/Serine exporter, ThrE CH53_RS05280 PF06738 Putative threonine/serine exporter CH53_RS05285 PF01810 LysE type translocator CH53_RS05290 PF02142 MGS-like domain CH53_RS05290 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CH53_RS05290 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CH53_RS05295 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CH53_RS05295 PF00117 Glutamine amidotransferase class-I CH53_RS05300 PF01113 Dihydrodipicolinate reductase, N-terminus CH53_RS05300 PF05173 Dihydrodipicolinate reductase, C-terminus CH53_RS05305 PF02401 LytB protein CH53_RS05310 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CH53_RS05315 PF01252 Signal peptidase (SPase) II CH53_RS05320 PF08264 Anticodon-binding domain of tRNA CH53_RS05320 PF00133 tRNA synthetases class I (I, L, M and V) CH53_RS05320 PF06827 Zinc finger found in FPG and IleRS CH53_RS05325 PF01687 Riboflavin kinase CH53_RS05325 PF06574 FAD synthetase CH53_RS05330 PF01649 Ribosomal protein S20 CH53_RS05335 PF03466 LysR substrate binding domain CH53_RS05335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH53_RS05340 PF06965 Na+/H+ antiporter 1 CH53_RS05345 PF00226 DnaJ domain CH53_RS05345 PF00684 DnaJ central domain CH53_RS05345 PF01556 DnaJ C terminal domain CH53_RS05350 PF00012 Hsp70 protein CH53_RS05355 PF01184 GPR1/FUN34/yaaH family CH53_RS05365 PF07690 Major Facilitator Superfamily CH53_RS05370 PF00994 Probable molybdopterin binding domain CH53_RS05375 PF00923 Transaldolase/Fructose-6-phosphate aldolase CH53_RS05380 PF03883 Peroxide stress protein YaaA CH53_RS05385 PF14821 Threonine synthase N terminus CH53_RS05385 PF00291 Pyridoxal-phosphate dependent enzyme CH53_RS05390 PF00288 GHMP kinases N terminal domain CH53_RS05390 PF08544 GHMP kinases C terminal CH53_RS05395 PF01842 ACT domain CH53_RS05395 PF00742 Homoserine dehydrogenase CH53_RS05395 PF13840 ACT domain CH53_RS05395 PF00696 Amino acid kinase family CH53_RS05395 PF03447 Homoserine dehydrogenase, NAD binding domain CH53_RS05405 PF00486 Transcriptional regulatory protein, C terminal CH53_RS05405 PF00072 Response regulator receiver domain CH53_RS05410 PF05981 CreA protein CH53_RS05415 PF12833 Helix-turn-helix domain CH53_RS05415 PF06445 GyrI-like small molecule binding domain CH53_RS05420 PF00300 Histidine phosphatase superfamily (branch 1) CH53_RS05425 PF01931 Protein of unknown function DUF84 CH53_RS05430 PF01371 Trp repressor protein CH53_RS05435 PF14718 Soluble lytic murein transglycosylase L domain CH53_RS05435 PF01464 Transglycosylase SLT domain CH53_RS05440 PF00689 Cation transporting ATPase, C-terminus CH53_RS05440 PF00690 Cation transporter/ATPase, N-terminus CH53_RS05445 PF13689 YfiR/HmsC-like CH53_RS05450 PF00990 Diguanylate cyclase, GGDEF domain CH53_RS05450 PF17152 Periplasmic sensor domain CH53_RS05455 PF00691 OmpA family CH53_RS05460 PF12848 ABC transporter CH53_RS05460 PF00005 ABC transporter CH53_RS05465 PF06379 L-rhamnose-proton symport protein (RhaT) CH53_RS05470 PF02311 AraC-like ligand binding domain CH53_RS05470 PF12833 Helix-turn-helix domain CH53_RS05475 PF02311 AraC-like ligand binding domain CH53_RS05475 PF12833 Helix-turn-helix domain CH53_RS05480 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CH53_RS05480 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CH53_RS05485 PF06134 L-rhamnose isomerase (RhaA) CH53_RS05490 PF00596 Class II Aldolase and Adducin N-terminal domain CH53_RS05495 PF00465 Iron-containing alcohol dehydrogenase CH53_RS05500 PF05336 L-rhamnose mutarotase CH53_RS05505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH53_RS05505 PF03466 LysR substrate binding domain CH53_RS05510 PF08240 Alcohol dehydrogenase GroES-like domain CH53_RS05510 PF00107 Zinc-binding dehydrogenase CH53_RS05515 PF13521 AAA domain CH53_RS05515 PF01381 Helix-turn-helix CH53_RS05520 PF18073 Rubredoxin metal binding domain CH53_RS05525 PF18429 Domain of unknown function (DUF5609) CH53_RS05530 PF10144 Bacterial virulence factor haemolysin CH53_RS05535 PF07804 HipA-like C-terminal domain CH53_RS05540 PF01048 Phosphorylase superfamily CH53_RS05545 PF01676 Metalloenzyme superfamily CH53_RS05550 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CH53_RS05550 PF00591 Glycosyl transferase family, a/b domain CH53_RS05550 PF02885 Glycosyl transferase family, helical bundle domain CH53_RS05555 PF01791 DeoC/LacD family aldolase CH53_RS05560 PF01773 Na+ dependent nucleoside transporter N-terminus CH53_RS05560 PF07662 Na+ dependent nucleoside transporter C-terminus CH53_RS05560 PF07670 Nucleoside recognition CH53_RS05565 PF01026 TatD related DNase CH53_RS05570 PF01734 Patatin-like phospholipase CH53_RS05575 PF04972 BON domain CH53_RS05580 PF03144 Elongation factor Tu domain 2 CH53_RS05580 PF16658 Class II release factor RF3, C-terminal domain CH53_RS05580 PF00009 Elongation factor Tu GTP binding domain CH53_RS05585 PF00583 Acetyltransferase (GNAT) family CH53_RS05590 PF03603 DNA polymerase III psi subunit CH53_RS05595 PF05175 Methyltransferase small domain CH53_RS05595 PF08468 Methyltransferase small domain N-terminal CH53_RS05600 PF00248 Aldo/keto reductase family CH53_RS05605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH53_RS05605 PF03466 LysR substrate binding domain CH53_RS05625 PF07256 Protein of unknown function (DUF1435) CH53_RS05630 PF00990 Diguanylate cyclase, GGDEF domain CH53_RS05635 PF00294 pfkB family carbohydrate kinase CH53_RS05640 PF11471 Maltoporin periplasmic N-terminal extension CH53_RS05640 PF02264 LamB porin CH53_RS05645 PF00367 phosphotransferase system, EIIB CH53_RS05645 PF02378 Phosphotransferase system, EIIC CH53_RS05650 PF08244 Glycosyl hydrolases family 32 C terminal CH53_RS05650 PF00251 Glycosyl hydrolases family 32 N-terminal domain CH53_RS05655 PF00356 Bacterial regulatory proteins, lacI family CH53_RS05655 PF13407 Periplasmic binding protein domain CH53_RS05660 PF00989 PAS fold CH53_RS05660 PF00158 Sigma-54 interaction domain CH53_RS05660 PF02954 Bacterial regulatory protein, Fis family CH53_RS05665 PF01095 Pectinesterase CH53_RS05690 PF16861 Carbamoyltransferase C-terminus CH53_RS05690 PF02543 Carbamoyltransferase N-terminus CH53_RS05700 PF00381 PTS HPr component phosphorylation site CH53_RS05700 PF00391 PEP-utilising enzyme, mobile domain CH53_RS05700 PF05524 PEP-utilising enzyme, N-terminal CH53_RS05700 PF03610 PTS system fructose IIA component CH53_RS05705 PF02734 DAK2 domain CH53_RS05710 PF02733 Dak1 domain CH53_RS05715 PF00465 Iron-containing alcohol dehydrogenase CH53_RS05720 PF00873 AcrB/AcrD/AcrF family CH53_RS05725 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CH53_RS05735 PF13520 Amino acid permease CH53_RS05745 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CH53_RS05750 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CH53_RS05750 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CH53_RS05755 PF04198 Putative sugar-binding domain CH53_RS05755 PF00325 Bacterial regulatory proteins, crp family CH53_RS05760 PF00005 ABC transporter CH53_RS05765 PF02653 Branched-chain amino acid transport system / permease component CH53_RS05770 PF02653 Branched-chain amino acid transport system / permease component CH53_RS05775 PF13407 Periplasmic binding protein domain CH53_RS05780 PF01791 DeoC/LacD family aldolase CH53_RS05785 PF03992 Antibiotic biosynthesis monooxygenase CH53_RS05790 PF00512 His Kinase A (phospho-acceptor) domain CH53_RS05790 PF08521 Two-component sensor kinase N-terminal CH53_RS05790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH53_RS05795 PF00072 Response regulator receiver domain CH53_RS05795 PF00486 Transcriptional regulatory protein, C terminal CH53_RS05810 PF01970 Tripartite tricarboxylate transporter TctA family CH53_RS05815 PF08349 Protein of unknown function (DUF1722) CH53_RS05820 PF10696 Protein of unknown function (DUF2501) CH53_RS05835 PF13693 Winged helix-turn-helix DNA-binding CH53_RS05840 PF02525 Flavodoxin-like fold CH53_RS05860 PF00583 Acetyltransferase (GNAT) family CH53_RS05865 PF17287 POTRA domain CH53_RS05865 PF08479 POTRA domain, ShlB-type CH53_RS05865 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CH53_RS05870 PF13018 Extended Signal Peptide of Type V secretion system CH53_RS05870 PF13332 Hemagglutinin repeat CH53_RS05870 PF04829 Pre-toxin domain with VENN motif CH53_RS05870 PF05860 haemagglutination activity domain CH53_RS05880 PF13610 DDE domain CH53_RS05960 PF02753 Pili assembly chaperone PapD, C-terminal domain CH53_RS05960 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CH53_RS05965 PF13954 PapC N-terminal domain CH53_RS05965 PF13953 PapC C-terminal domain CH53_RS05965 PF00577 Outer membrane usher protein CH53_RS05985 PF09134 Invasin, domain 3 CH53_RS05985 PF02369 Bacterial Ig-like domain (group 1) CH53_RS05985 PF11924 Inverse autotransporter, beta-domain CH53_RS05995 PF01527 Transposase CH53_RS06080 PF01443 Viral (Superfamily 1) RNA helicase CH53_RS06080 PF03389 MobA/MobL family CH53_RS06080 PF17841 BID domain of Bartonella effector protein (Bep) CH53_RS06095 PF04917 Bacterial shufflon protein, N-terminal constant region CH53_RS06105 PF08774 VRR-NUC domain CH53_RS06105 PF04851 Type III restriction enzyme, res subunit CH53_RS06110 PF01555 DNA methylase CH53_RS06110 PF18273 Type III R-M EcoP15I C-terminal domain CH53_RS06115 PF00589 Phage integrase family CH53_RS06115 PF13356 Arm DNA-binding domain CH53_RS06125 PF03739 Lipopolysaccharide export system permease LptF/LptG CH53_RS06130 PF03739 Lipopolysaccharide export system permease LptF/LptG CH53_RS06135 PF00883 Cytosol aminopeptidase family, catalytic domain CH53_RS06135 PF02789 Cytosol aminopeptidase family, N-terminal domain CH53_RS06140 PF04364 DNA polymerase III chi subunit, HolC CH53_RS06145 PF10458 Valyl tRNA synthetase tRNA binding arm CH53_RS06145 PF00133 tRNA synthetases class I (I, L, M and V) CH53_RS06145 PF08264 Anticodon-binding domain of tRNA CH53_RS06150 PF00583 Acetyltransferase (GNAT) family CH53_RS06155 PF06877 Regulator of ribonuclease activity B CH53_RS06160 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CH53_RS06160 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CH53_RS06165 PF04074 YhcH/YjgK/YiaL CH53_RS06175 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS06180 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS06180 PF12911 N-terminal TM domain of oligopeptide transport permease C CH53_RS06185 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CH53_RS06185 PF00005 ABC transporter CH53_RS06190 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CH53_RS06190 PF00005 ABC transporter CH53_RS06195 PF02525 Flavodoxin-like fold CH53_RS06200 PF03466 LysR substrate binding domain CH53_RS06200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH53_RS06205 PF03477 ATP cone domain CH53_RS06205 PF13597 Anaerobic ribonucleoside-triphosphate reductase CH53_RS06215 PF07702 UTRA domain CH53_RS06215 PF00392 Bacterial regulatory proteins, gntR family CH53_RS06220 PF06754 Phosphonate metabolism protein PhnG CH53_RS06225 PF05845 Bacterial phosphonate metabolism protein (PhnH) CH53_RS06230 PF05861 Bacterial phosphonate metabolism protein (PhnI) CH53_RS06235 PF06007 Phosphonate metabolism protein PhnJ CH53_RS06240 PF00005 ABC transporter CH53_RS06245 PF00005 ABC transporter CH53_RS06250 PF07969 Amidohydrolase family CH53_RS06260 PF12706 Beta-lactamase superfamily domain CH53_RS06265 PF13460 NAD(P)H-binding CH53_RS06275 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CH53_RS06275 PF01276 Orn/Lys/Arg decarboxylase, major domain CH53_RS06275 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CH53_RS06280 PF13520 Amino acid permease CH53_RS06285 PF01541 GIY-YIG catalytic domain CH53_RS06290 PF13508 Acetyltransferase (GNAT) domain CH53_RS06295 PF02036 SCP-2 sterol transfer family CH53_RS06300 PF01136 Peptidase family U32 CH53_RS06305 PF01136 Peptidase family U32 CH53_RS06310 PF00296 Luciferase-like monooxygenase CH53_RS06315 PF12343 Cold shock protein DEAD box A CH53_RS06315 PF00271 Helicase conserved C-terminal domain CH53_RS06315 PF00270 DEAD/DEAH box helicase CH53_RS06315 PF03880 DbpA RNA binding domain CH53_RS06320 PF13181 Tetratricopeptide repeat CH53_RS06320 PF07719 Tetratricopeptide repeat CH53_RS06325 PF00013 KH domain CH53_RS06325 PF00575 S1 RNA binding domain CH53_RS06325 PF01138 3' exoribonuclease family, domain 1 CH53_RS06325 PF03725 3' exoribonuclease family, domain 2 CH53_RS06325 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CH53_RS06330 PF00312 Ribosomal protein S15 CH53_RS06335 PF09157 Pseudouridine synthase II TruB, C-terminal CH53_RS06335 PF16198 tRNA pseudouridylate synthase B C-terminal domain CH53_RS06335 PF01509 TruB family pseudouridylate synthase (N terminal domain) CH53_RS06340 PF02033 Ribosome-binding factor A CH53_RS06345 PF08364 Bacterial translation initiation factor IF-2 associated region CH53_RS06345 PF00009 Elongation factor Tu GTP binding domain CH53_RS06345 PF11987 Translation-initiation factor 2 CH53_RS06345 PF03144 Elongation factor Tu domain 2 CH53_RS06345 PF04760 Translation initiation factor IF-2, N-terminal region CH53_RS06350 PF00575 S1 RNA binding domain CH53_RS06350 PF08529 NusA N-terminal domain CH53_RS06350 PF13184 NusA-like KH domain CH53_RS06355 PF02576 RimP N-terminal domain CH53_RS06355 PF17384 RimP C-terminal SH3 domain CH53_RS06370 PF03840 Preprotein translocase SecG subunit CH53_RS06375 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CH53_RS06375 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CH53_RS06375 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CH53_RS06375 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CH53_RS06380 PF00809 Pterin binding enzyme CH53_RS06385 PF06480 FtsH Extracellular CH53_RS06385 PF00004 ATPase family associated with various cellular activities (AAA) CH53_RS06385 PF01434 Peptidase family M41 CH53_RS06385 PF17862 AAA+ lid domain CH53_RS06390 PF01728 FtsJ-like methyltransferase CH53_RS06395 PF01985 CRS1 / YhbY (CRM) domain CH53_RS06400 PF03449 Transcription elongation factor, N-terminal CH53_RS06400 PF01272 Transcription elongation factor, GreA/GreB, C-term CH53_RS06405 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CH53_RS06410 PF00486 Transcriptional regulatory protein, C terminal CH53_RS06410 PF00072 Response regulator receiver domain CH53_RS06415 PF00672 HAMP domain CH53_RS06415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH53_RS06415 PF00512 His Kinase A (phospho-acceptor) domain CH53_RS06420 PF01018 GTP1/OBG CH53_RS06420 PF01926 50S ribosome-binding GTPase CH53_RS06425 PF00892 EamA-like transporter family CH53_RS06430 PF01016 Ribosomal L27 protein CH53_RS06435 PF00829 Ribosomal prokaryotic L21 protein CH53_RS06440 PF00348 Polyprenyl synthetase CH53_RS06455 PF13693 Winged helix-turn-helix DNA-binding CH53_RS06460 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CH53_RS06460 PF00056 lactate/malate dehydrogenase, NAD binding domain CH53_RS06465 PF01316 Arginine repressor, DNA binding domain CH53_RS06465 PF02863 Arginine repressor, C-terminal domain CH53_RS06480 PF01225 Mur ligase family, catalytic domain CH53_RS06480 PF02875 Mur ligase family, glutamate ligase domain CH53_RS06480 PF08245 Mur ligase middle domain CH53_RS06485 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CH53_RS06490 PF00719 Inorganic pyrophosphatase CH53_RS06495 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like CH53_RS06500 PF04357 TamB, inner membrane protein subunit of TAM complex CH53_RS06505 PF07244 Surface antigen variable number repeat CH53_RS06505 PF01103 Surface antigen CH53_RS06505 PF17243 POTRA domain TamA domain 1 CH53_RS06510 PF01625 Peptide methionine sulfoxide reductase CH53_RS06515 PF01595 Cyclin M transmembrane N-terminal domain CH53_RS06515 PF03471 Transporter associated domain CH53_RS06515 PF00571 CBS domain CH53_RS06520 PF06526 Protein of unknown function (DUF1107) CH53_RS06525 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) CH53_RS06530 PF00459 Inositol monophosphatase family CH53_RS06535 PF00149 Calcineurin-like phosphoesterase CH53_RS06535 PF02872 5'-nucleotidase, C-terminal domain CH53_RS06540 PF04405 Domain of Unknown function (DUF542) CH53_RS06540 PF01814 Hemerythrin HHE cation binding domain CH53_RS06545 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CH53_RS06545 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CH53_RS06550 PF08525 Opacity-associated protein A N-terminal motif CH53_RS06550 PF04225 Opacity-associated protein A LysM-like domain CH53_RS06560 PF03948 Ribosomal protein L9, C-terminal domain CH53_RS06560 PF01281 Ribosomal protein L9, N-terminal domain CH53_RS06565 PF01084 Ribosomal protein S18 CH53_RS06570 PF00436 Single-strand binding protein family CH53_RS06575 PF01250 Ribosomal protein S6 CH53_RS06580 PF07338 Protein of unknown function (DUF1471) CH53_RS06585 PF00326 Prolyl oligopeptidase family CH53_RS06590 PF07338 Protein of unknown function (DUF1471) CH53_RS06595 PF18158 Adaptive response protein AidB N-terminal domain CH53_RS06595 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CH53_RS06595 PF02770 Acyl-CoA dehydrogenase, middle domain CH53_RS06600 PF08032 RNA 2'-O ribose methyltransferase substrate binding CH53_RS06600 PF00588 SpoU rRNA Methylase family CH53_RS06605 PF00575 S1 RNA binding domain CH53_RS06605 PF08206 Ribonuclease B OB domain CH53_RS06605 PF08461 Ribonuclease R winged-helix domain CH53_RS06605 PF17876 Cold shock domain CH53_RS06605 PF00773 RNB domain CH53_RS06610 PF02082 Transcriptional regulator CH53_RS06615 PF00709 Adenylosuccinate synthetase CH53_RS06620 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) CH53_RS06625 PF01145 SPFH domain / Band 7 family CH53_RS06630 PF01145 SPFH domain / Band 7 family CH53_RS06630 PF12221 Bacterial membrane protein N terminal CH53_RS06635 PF01926 50S ribosome-binding GTPase CH53_RS06635 PF16360 GTP-binding GTPase Middle Region CH53_RS06635 PF13167 GTP-binding GTPase N-terminal CH53_RS06640 PF17209 Hfq protein CH53_RS06650 PF01119 DNA mismatch repair protein, C-terminal domain CH53_RS06650 PF08676 MutL C terminal dimerisation domain CH53_RS06655 PF01520 N-acetylmuramoyl-L-alanine amidase CH53_RS06660 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CH53_RS06665 PF01256 Carbohydrate kinase CH53_RS06665 PF03853 YjeF-related protein N-terminus CH53_RS06670 PF08331 Domain of unknown function (DUF1730) CH53_RS06695 PF00929 Exonuclease CH53_RS06700 PF03193 RsgA GTPase CH53_RS06705 PF02666 Phosphatidylserine decarboxylase CH53_RS06710 PF12794 Mechanosensitive ion channel inner membrane domain 1 CH53_RS06710 PF12795 Mechanosensitive ion channel porin domain CH53_RS06710 PF00924 Mechanosensitive ion channel CH53_RS06715 PF00152 tRNA synthetases class II (D, K and N) CH53_RS06720 PF02910 Fumarate reductase flavoprotein C-term CH53_RS06720 PF00890 FAD binding domain CH53_RS06725 PF13183 4Fe-4S dicluster domain CH53_RS06725 PF13085 2Fe-2S iron-sulfur cluster binding domain CH53_RS06730 PF02300 Fumarate reductase subunit C CH53_RS06735 PF02313 Fumarate reductase subunit D CH53_RS06740 PF08212 Lipocalin-like domain CH53_RS06745 PF00893 Small Multidrug Resistance protein CH53_RS06750 PF08085 Entericidin EcnA/B family CH53_RS06755 PF08207 Elongation factor P (EF-P) KOW-like domain CH53_RS06755 PF01132 Elongation factor P (EF-P) OB domain CH53_RS06755 PF09285 Elongation factor P, C-terminal CH53_RS06760 PF04055 Radical SAM superfamily CH53_RS06765 PF13698 Domain of unknown function (DUF4156) CH53_RS06770 PF00118 TCP-1/cpn60 chaperonin family CH53_RS06775 PF00166 Chaperonin 10 Kd subunit CH53_RS06780 PF04186 FxsA cytoplasmic membrane protein CH53_RS06785 PF10415 Fumarase C C-terminus CH53_RS06785 PF00206 Lyase CH53_RS06790 PF03605 Anaerobic c4-dicarboxylate membrane transporter CH53_RS06795 PF03091 CutA1 divalent ion tolerance protein CH53_RS06800 PF11412 Disulphide bond corrector protein DsbC CH53_RS06800 PF02683 Cytochrome C biogenesis protein transmembrane region CH53_RS06805 PF01568 Molydopterin dinucleotide binding domain CH53_RS06805 PF00384 Molybdopterin oxidoreductase CH53_RS06805 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CH53_RS06810 PF13247 4Fe-4S dicluster domain CH53_RS06810 PF12800 4Fe-4S binding domain CH53_RS06815 PF13247 4Fe-4S dicluster domain CH53_RS06815 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CH53_RS06815 PF07992 Pyridine nucleotide-disulphide oxidoreductase CH53_RS06820 PF07690 Major Facilitator Superfamily CH53_RS06825 PF08666 SAF domain CH53_RS06825 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CH53_RS06830 PF05651 Putative sugar diacid recognition CH53_RS06830 PF17853 GGDEF-like domain CH53_RS06830 PF13556 PucR C-terminal helix-turn-helix domain CH53_RS06835 PF02595 Glycerate kinase family CH53_RS06840 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CH53_RS06840 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CH53_RS06845 PF03328 HpcH/HpaI aldolase/citrate lyase family CH53_RS06860 PF07075 Protein of unknown function (DUF1343) CH53_RS06870 PF00933 Glycosyl hydrolase family 3 N terminal domain CH53_RS06870 PF01915 Glycosyl hydrolase family 3 C-terminal domain CH53_RS06875 PF01380 SIS domain CH53_RS06875 PF01418 Helix-turn-helix domain, rpiR family CH53_RS06880 PF13580 SIS domain CH53_RS06885 PF00367 phosphotransferase system, EIIB CH53_RS06885 PF02378 Phosphotransferase system, EIIC CH53_RS06895 PF00672 HAMP domain CH53_RS06895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CH53_RS06895 PF02203 Tar ligand binding domain homologue CH53_RS06900 PF02901 Pyruvate formate lyase-like CH53_RS06900 PF01228 Glycine radical CH53_RS06905 PF00871 Acetokinase family CH53_RS06910 PF01490 Transmembrane amino acid transporter protein CH53_RS06915 PF00291 Pyridoxal-phosphate dependent enzyme CH53_RS06920 PF00005 ABC transporter CH53_RS06920 PF12848 ABC transporter CH53_RS06920 PF16326 ABC transporter C-terminal domain CH53_RS06925 PF10636 Hemin uptake protein hemP CH53_RS06930 PF07715 TonB-dependent Receptor Plug Domain CH53_RS06930 PF00593 TonB dependent receptor CH53_RS06935 PF05171 Haemin-degrading HemS.ChuX domain CH53_RS06940 PF01497 Periplasmic binding protein CH53_RS06945 PF01032 FecCD transport family CH53_RS06950 PF00005 ABC transporter CH53_RS06955 PF00392 Bacterial regulatory proteins, gntR family CH53_RS06955 PF00155 Aminotransferase class I and II CH53_RS06965 PF07715 TonB-dependent Receptor Plug Domain CH53_RS06965 PF00593 TonB dependent receptor CH53_RS06970 PF12794 Mechanosensitive ion channel inner membrane domain 1 CH53_RS06970 PF00924 Mechanosensitive ion channel CH53_RS06970 PF12795 Mechanosensitive ion channel porin domain CH53_RS06975 PF01312 FlhB HrpN YscU SpaS Family CH53_RS06980 PF01311 Bacterial export proteins, family 1 CH53_RS06985 PF01313 Bacterial export proteins, family 3 CH53_RS06990 PF00813 FliP family CH53_RS07010 PF18269 T3SS EscN ATPase C-terminal domain CH53_RS07010 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CH53_RS07015 PF00771 FHIPEP family CH53_RS07025 PF07201 HrpJ-like domain CH53_RS07040 PF01514 Secretory protein of YscJ/FliF family CH53_RS07060 PF12833 Helix-turn-helix domain CH53_RS07060 PF14525 AraC-binding-like domain CH53_RS07085 PF04888 Secretion system effector C (SseC) like family CH53_RS07095 PF03433 EspA-like secreted protein CH53_RS07115 PF03958 Bacterial type II/III secretion system short domain CH53_RS07115 PF00263 Bacterial type II and III secretion system protein CH53_RS07125 PF00072 Response regulator receiver domain CH53_RS07125 PF00672 HAMP domain CH53_RS07125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH53_RS07125 PF00512 His Kinase A (phospho-acceptor) domain CH53_RS07125 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CH53_RS07125 PF01627 Hpt domain CH53_RS07130 PF00072 Response regulator receiver domain CH53_RS07130 PF00196 Bacterial regulatory proteins, luxR family CH53_RS07135 PF00375 Sodium:dicarboxylate symporter family CH53_RS07140 PF13193 AMP-binding enzyme C-terminal domain CH53_RS07140 PF16177 Acetyl-coenzyme A synthetase N-terminus CH53_RS07140 PF00501 AMP-binding enzyme CH53_RS07145 PF04341 Protein of unknown function, DUF485 CH53_RS07150 PF00474 Sodium:solute symporter family CH53_RS07180 PF00132 Bacterial transferase hexapeptide (six repeats) CH53_RS07185 PF01488 Shikimate / quinate 5-dehydrogenase CH53_RS07185 PF08501 Shikimate dehydrogenase substrate binding domain CH53_RS07185 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CH53_RS07190 PF01300 Telomere recombination CH53_RS07195 PF01396 Topoisomerase DNA binding C4 zinc finger CH53_RS07200 PF04361 Protein of unknown function (DUF494) CH53_RS07205 PF02481 DNA recombination-mediator protein A CH53_RS07205 PF17782 DprA winged helix domain CH53_RS07210 PF01327 Polypeptide deformylase CH53_RS07215 PF00551 Formyl transferase CH53_RS07215 PF02911 Formyl transferase, C-terminal domain CH53_RS07220 PF01189 16S rRNA methyltransferase RsmB/F CH53_RS07220 PF01029 NusB family CH53_RS07225 PF02254 TrkA-N domain CH53_RS07225 PF02080 TrkA-C domain CH53_RS07230 PF01741 Large-conductance mechanosensitive channel, MscL CH53_RS07235 PF03889 Alternative ribosome-rescue factor A CH53_RS07240 PF13411 MerR HTH family regulatory protein CH53_RS07245 PF09350 Domain of unknown function (DUF1992) CH53_RS07250 PF01196 Ribosomal protein L17 CH53_RS07255 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CH53_RS07255 PF01000 RNA polymerase Rpb3/RpoA insert domain CH53_RS07255 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CH53_RS07260 PF00163 Ribosomal protein S4/S9 N-terminal domain CH53_RS07260 PF01479 S4 domain CH53_RS07265 PF00411 Ribosomal protein S11 CH53_RS07270 PF00416 Ribosomal protein S13/S18 CH53_RS07275 PF00444 Ribosomal protein L36 CH53_RS07280 PF00344 SecY translocase CH53_RS07285 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CH53_RS07290 PF00327 Ribosomal protein L30p/L7e CH53_RS07295 PF03719 Ribosomal protein S5, C-terminal domain CH53_RS07295 PF00333 Ribosomal protein S5, N-terminal domain CH53_RS07300 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CH53_RS07305 PF00347 Ribosomal protein L6 CH53_RS07310 PF00410 Ribosomal protein S8 CH53_RS07315 PF00253 Ribosomal protein S14p/S29e CH53_RS07320 PF00673 ribosomal L5P family C-terminus CH53_RS07320 PF00281 Ribosomal protein L5 CH53_RS07325 PF00467 KOW motif CH53_RS07325 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CH53_RS07330 PF00238 Ribosomal protein L14p/L23e CH53_RS07335 PF00366 Ribosomal protein S17 CH53_RS07340 PF00831 Ribosomal L29 protein CH53_RS07345 PF00252 Ribosomal protein L16p/L10e CH53_RS07350 PF07650 KH domain CH53_RS07350 PF00189 Ribosomal protein S3, C-terminal domain CH53_RS07355 PF00237 Ribosomal protein L22p/L17e CH53_RS07360 PF00203 Ribosomal protein S19 CH53_RS07365 PF03947 Ribosomal Proteins L2, C-terminal domain CH53_RS07365 PF00181 Ribosomal Proteins L2, RNA binding domain CH53_RS07370 PF00276 Ribosomal protein L23 CH53_RS07375 PF00573 Ribosomal protein L4/L1 family CH53_RS07380 PF00297 Ribosomal protein L3 CH53_RS07385 PF00338 Ribosomal protein S10p/S20e CH53_RS07390 PF00210 Ferritin-like domain CH53_RS07395 PF04324 BFD-like [2Fe-2S] binding domain CH53_RS07400 PF03144 Elongation factor Tu domain 2 CH53_RS07400 PF00009 Elongation factor Tu GTP binding domain CH53_RS07400 PF03143 Elongation factor Tu C-terminal domain CH53_RS07405 PF03144 Elongation factor Tu domain 2 CH53_RS07405 PF00009 Elongation factor Tu GTP binding domain CH53_RS07405 PF03764 Elongation factor G, domain IV CH53_RS07405 PF14492 Elongation Factor G, domain II CH53_RS07405 PF00679 Elongation factor G C-terminus CH53_RS07410 PF00177 Ribosomal protein S7p/S5e CH53_RS07415 PF00164 Ribosomal protein S12/S23 CH53_RS07420 PF04077 DsrH like protein CH53_RS07425 PF02635 DsrE/DsrF-like family CH53_RS07430 PF02635 DsrE/DsrF-like family CH53_RS07435 PF08348 YheO-like PAS domain CH53_RS07435 PF13309 HTH domain CH53_RS07440 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CH53_RS07440 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CH53_RS07445 PF04102 SlyX CH53_RS07450 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CH53_RS07455 PF09526 Probable metal-binding protein (DUF2387) CH53_RS07460 PF02254 TrkA-N domain CH53_RS07460 PF00999 Sodium/hydrogen exchanger family CH53_RS07465 PF02525 Flavodoxin-like fold CH53_RS07470 PF00005 ABC transporter CH53_RS07470 PF12848 ABC transporter CH53_RS07475 PF00535 Glycosyl transferase family 2 CH53_RS07485 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CH53_RS07490 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS07495 PF00005 ABC transporter CH53_RS07500 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CH53_RS07505 PF02567 Phenazine biosynthesis-like protein CH53_RS07510 PF01810 LysE type translocator CH53_RS07515 PF00561 alpha/beta hydrolase fold CH53_RS07520 PF06794 Uncharacterised protein family (UPF0270) CH53_RS07525 PF00485 Phosphoribulokinase / Uridine kinase family CH53_RS07530 PF02566 OsmC-like protein CH53_RS07535 PF13545 Crp-like helix-turn-helix domain CH53_RS07535 PF00027 Cyclic nucleotide-binding domain CH53_RS07540 PF12805 FUSC-like inner membrane protein yccS CH53_RS07545 PF00202 Aminotransferase class-III CH53_RS07550 PF00117 Glutamine amidotransferase class-I CH53_RS07565 PF05872 Bacterial protein of unknown function (DUF853) CH53_RS07570 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CH53_RS07580 PF11975 Family 4 glycosyl hydrolase C-terminal domain CH53_RS07580 PF02056 Family 4 glycosyl hydrolase CH53_RS07585 PF00356 Bacterial regulatory proteins, lacI family CH53_RS07590 PF07715 TonB-dependent Receptor Plug Domain CH53_RS07590 PF00593 TonB dependent receptor CH53_RS07600 PF07690 Major Facilitator Superfamily CH53_RS07605 PF07969 Amidohydrolase family CH53_RS07610 PF04324 BFD-like [2Fe-2S] binding domain CH53_RS07610 PF07992 Pyridine nucleotide-disulphide oxidoreductase CH53_RS07610 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CH53_RS07610 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CH53_RS07610 PF18267 Rubredoxin NAD+ reductase C-terminal domain CH53_RS07615 PF13806 Rieske-like [2Fe-2S] domain CH53_RS07620 PF01226 Formate/nitrite transporter CH53_RS07625 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CH53_RS07625 PF14824 Sirohaem biosynthesis protein central CH53_RS07625 PF10414 Sirohaem synthase dimerisation region CH53_RS07630 PF00579 tRNA synthetases class I (W and Y) CH53_RS07635 PF13419 Haloacid dehalogenase-like hydrolase CH53_RS07640 PF00834 Ribulose-phosphate 3 epimerase family CH53_RS07645 PF02086 D12 class N6 adenine-specific DNA methyltransferase CH53_RS07650 PF05036 Sporulation related domain CH53_RS07655 PF01761 3-dehydroquinate synthase CH53_RS07660 PF01202 Shikimate kinase CH53_RS07665 PF03958 Bacterial type II/III secretion system short domain CH53_RS07665 PF00263 Bacterial type II and III secretion system protein CH53_RS07690 PF00912 Transglycosylase CH53_RS07690 PF17092 Penicillin-binding protein OB-like domain CH53_RS07690 PF00905 Penicillin binding protein transpeptidase domain CH53_RS07695 PF00293 NUDIX domain CH53_RS07700 PF07095 Intracellular growth attenuator protein IgaA CH53_RS07705 PF13419 Haloacid dehalogenase-like hydrolase CH53_RS07710 PF01479 S4 domain CH53_RS07715 PF01430 Hsp33 protein CH53_RS07720 PF01293 Phosphoenolpyruvate carboxykinase CH53_RS07730 PF00672 HAMP domain CH53_RS07730 PF00512 His Kinase A (phospho-acceptor) domain CH53_RS07730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH53_RS07735 PF00486 Transcriptional regulatory protein, C terminal CH53_RS07735 PF00072 Response regulator receiver domain CH53_RS07740 PF01272 Transcription elongation factor, GreA/GreB, C-term CH53_RS07740 PF03449 Transcription elongation factor, N-terminal CH53_RS07745 PF00575 S1 RNA binding domain CH53_RS07745 PF09371 Tex-like protein N-terminal domain CH53_RS07745 PF16921 Tex protein YqgF-like domain CH53_RS07745 PF17674 HHH domain CH53_RS07750 PF04023 FeoA domain CH53_RS07755 PF07664 Ferrous iron transport protein B C terminus CH53_RS07755 PF07670 Nucleoside recognition CH53_RS07755 PF02421 Ferrous iron transport protein B CH53_RS07755 PF17910 FeoB cytosolic helical domain CH53_RS07760 PF09012 FeoC like transcriptional regulator CH53_RS07765 PF07338 Protein of unknown function (DUF1471) CH53_RS07770 PF00561 alpha/beta hydrolase fold CH53_RS07775 PF00156 Phosphoribosyl transferase domain CH53_RS07780 PF01106 NifU-like domain CH53_RS07780 PF01521 Iron-sulphur cluster biosynthesis CH53_RS07785 PF02446 4-alpha-glucanotransferase CH53_RS07790 PF00343 Carbohydrate phosphorylase CH53_RS07795 PF17874 MalT-like TPR region CH53_RS07795 PF00196 Bacterial regulatory proteins, luxR family CH53_RS07800 PF00581 Rhodanese-like domain CH53_RS07805 PF01694 Rhomboid family CH53_RS07805 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease CH53_RS07810 PF00455 DeoR C terminal sensor domain CH53_RS07810 PF08220 DeoR-like helix-turn-helix domain CH53_RS07815 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CH53_RS07815 PF01266 FAD dependent oxidoreductase CH53_RS07820 PF00343 Carbohydrate phosphorylase CH53_RS07825 PF08323 Starch synthase catalytic domain CH53_RS07825 PF00534 Glycosyl transferases group 1 CH53_RS07830 PF00483 Nucleotidyl transferase CH53_RS07835 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CH53_RS07835 PF00128 Alpha amylase, catalytic domain CH53_RS07835 PF18390 Glycogen debranching enzyme C-terminal domain CH53_RS07840 PF00128 Alpha amylase, catalytic domain CH53_RS07840 PF02806 Alpha amylase, C-terminal all-beta domain CH53_RS07840 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CH53_RS07845 PF06580 Histidine kinase CH53_RS07845 PF07694 5TMR of 5TMR-LYT CH53_RS07850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH53_RS07850 PF03466 LysR substrate binding domain CH53_RS07855 PF03306 Alpha-acetolactate decarboxylase CH53_RS07860 PF00205 Thiamine pyrophosphate enzyme, central domain CH53_RS07860 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CH53_RS07860 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CH53_RS07865 PF02774 Semialdehyde dehydrogenase, dimerisation domain CH53_RS07865 PF01118 Semialdehyde dehydrogenase, NAD binding domain CH53_RS07870 PF01914 MarC family integral membrane protein CH53_RS07875 PF01202 Shikimate kinase CH53_RS07880 PF02447 GntP family permease CH53_RS07885 PF00356 Bacterial regulatory proteins, lacI family CH53_RS07885 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CH53_RS07890 PF02678 Pirin CH53_RS07890 PF17954 Quercetinase C-terminal cupin domain CH53_RS07895 PF00583 Acetyltransferase (GNAT) family CH53_RS07900 PF01261 Xylose isomerase-like TIM barrel CH53_RS07905 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CH53_RS07905 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CH53_RS07910 PF00205 Thiamine pyrophosphate enzyme, central domain CH53_RS07910 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CH53_RS07910 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CH53_RS07915 PF00294 pfkB family carbohydrate kinase CH53_RS07925 PF04962 KduI/IolB family CH53_RS07930 PF00171 Aldehyde dehydrogenase family CH53_RS07940 PF07690 Major Facilitator Superfamily CH53_RS07945 PF03466 LysR substrate binding domain CH53_RS07945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH53_RS07950 PF03466 LysR substrate binding domain CH53_RS07950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH53_RS07955 PF00144 Beta-lactamase CH53_RS07965 PF01384 Phosphate transporter family CH53_RS07970 PF10625 Universal stress protein B (UspB) CH53_RS07975 PF00582 Universal stress protein family CH53_RS07980 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CH53_RS07980 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CH53_RS07985 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) CH53_RS07985 PF08548 Peptidase M10 serralysin C terminal CH53_RS07990 PF04445 Putative SAM-dependent methyltransferase CH53_RS07995 PF01432 Peptidase family M3 CH53_RS08000 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CH53_RS08005 PF07992 Pyridine nucleotide-disulphide oxidoreductase CH53_RS08005 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CH53_RS08015 PF08671 Anti-repressor SinI CH53_RS08015 PF01381 Helix-turn-helix CH53_RS08020 PF03631 Virulence factor BrkB CH53_RS08025 PF02611 CDP-diacylglycerol pyrophosphatase CH53_RS08030 PF05170 AsmA family CH53_RS08035 PF00563 EAL domain CH53_RS08040 PF01361 Tautomerase enzyme CH53_RS08045 PF00294 pfkB family carbohydrate kinase CH53_RS08050 PF05193 Peptidase M16 inactive domain CH53_RS08050 PF00675 Insulinase (Peptidase family M16) CH53_RS08055 PF00375 Sodium:dicarboxylate symporter family CH53_RS08065 PF06917 Periplasmic pectate lyase CH53_RS08070 PF06178 Oligogalacturonate-specific porin protein (KdgM) CH53_RS08080 PF13953 PapC C-terminal domain CH53_RS08080 PF00577 Outer membrane usher protein CH53_RS08080 PF13954 PapC N-terminal domain CH53_RS08085 PF02753 Pili assembly chaperone PapD, C-terminal domain CH53_RS08085 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CH53_RS08095 PF00990 Diguanylate cyclase, GGDEF domain CH53_RS08095 PF00672 HAMP domain CH53_RS08095 PF17154 Gammaproteobacterial periplasmic sensor domain CH53_RS08095 PF00563 EAL domain CH53_RS08100 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) CH53_RS08105 PF01270 Glycosyl hydrolases family 8 CH53_RS08110 PF03170 Bacterial cellulose synthase subunit CH53_RS08115 PF00535 Glycosyl transferase family 2 CH53_RS08115 PF07238 PilZ domain CH53_RS08120 PF06564 Cellulose biosynthesis protein BcsQ CH53_RS08130 PF10995 Cellulose biosynthesis GIL CH53_RS08135 PF11120 Cellulose biosynthesis protein BcsF CH53_RS08140 PF11658 Cellulose biosynthesis protein BcsG CH53_RS08145 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CH53_RS08145 PF00005 ABC transporter CH53_RS08150 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CH53_RS08150 PF00005 ABC transporter CH53_RS08155 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS08155 PF12911 N-terminal TM domain of oligopeptide transport permease C CH53_RS08160 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS08165 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CH53_RS08180 PF07690 Major Facilitator Superfamily CH53_RS08185 PF07730 Histidine kinase CH53_RS08185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH53_RS08185 PF05231 MASE1 CH53_RS08190 PF00072 Response regulator receiver domain CH53_RS08190 PF00196 Bacterial regulatory proteins, luxR family CH53_RS08195 PF08019 Phosphoethanolamine transferase EptA/EptB CH53_RS08195 PF00884 Sulfatase CH53_RS08200 PF02566 OsmC-like protein CH53_RS08205 PF12146 Serine aminopeptidase, S33 CH53_RS08215 PF00324 Amino acid permease CH53_RS08220 PF00221 Aromatic amino acid lyase CH53_RS08225 PF01175 Urocanase Rossmann-like domain CH53_RS08225 PF17392 Urocanase C-terminal domain CH53_RS08225 PF17391 Urocanase N-terminal domain CH53_RS08235 PF12833 Helix-turn-helix domain CH53_RS08240 PF02653 Branched-chain amino acid transport system / permease component CH53_RS08245 PF00005 ABC transporter CH53_RS08250 PF13407 Periplasmic binding protein domain CH53_RS08260 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CH53_RS08260 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CH53_RS08270 PF02753 Pili assembly chaperone PapD, C-terminal domain CH53_RS08270 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CH53_RS08275 PF13953 PapC C-terminal domain CH53_RS08275 PF13954 PapC N-terminal domain CH53_RS08275 PF00577 Outer membrane usher protein CH53_RS08280 PF00419 Fimbrial protein CH53_RS08285 PF00857 Isochorismatase family CH53_RS08295 PF01757 Acyltransferase family CH53_RS08300 PF07690 Major Facilitator Superfamily CH53_RS08305 PF09107 Elongation factor SelB, winged helix CH53_RS08305 PF09106 Elongation factor SelB, winged helix CH53_RS08305 PF00009 Elongation factor Tu GTP binding domain CH53_RS08305 PF03144 Elongation factor Tu domain 2 CH53_RS08310 PF12390 Selenocysteine synthase N terminal CH53_RS08310 PF03841 L-seryl-tRNA selenium transferase CH53_RS08315 PF04216 Protein involved in formate dehydrogenase formation CH53_RS08320 PF01292 Prokaryotic cytochrome b561 CH53_RS08325 PF13247 4Fe-4S dicluster domain CH53_RS08325 PF09163 Formate dehydrogenase N, transmembrane CH53_RS08330 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CH53_RS08330 PF00384 Molybdopterin oxidoreductase CH53_RS08330 PF01568 Molydopterin dinucleotide binding domain CH53_RS08335 PF00384 Molybdopterin oxidoreductase CH53_RS08335 PF01568 Molydopterin dinucleotide binding domain CH53_RS08335 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CH53_RS08340 PF02634 FdhD/NarQ family CH53_RS08345 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CH53_RS08345 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CH53_RS08350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CH53_RS08350 PF00672 HAMP domain CH53_RS08350 PF02203 Tar ligand binding domain homologue CH53_RS08355 PF03473 MOSC domain CH53_RS08355 PF03475 3-alpha domain CH53_RS08360 PF04221 RelB antitoxin CH53_RS08370 PF10928 Protein of unknown function (DUF2810) CH53_RS08375 PF00155 Aminotransferase class I and II CH53_RS08375 PF00392 Bacterial regulatory proteins, gntR family CH53_RS08385 PF05068 Mannitol repressor CH53_RS08390 PF08125 Mannitol dehydrogenase C-terminal domain CH53_RS08390 PF01232 Mannitol dehydrogenase Rossmann domain CH53_RS08395 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CH53_RS08395 PF02378 Phosphotransferase system, EIIC CH53_RS08395 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CH53_RS08400 PF11254 Protein of unknown function (DUF3053) CH53_RS08405 PF05746 DALR anticodon binding domain CH53_RS08405 PF02092 Glycyl-tRNA synthetase beta subunit CH53_RS08410 PF02091 Glycyl-tRNA synthetase alpha subunit CH53_RS08415 PF03352 Methyladenine glycosylase CH53_RS08420 PF00583 Acetyltransferase (GNAT) family CH53_RS08435 PF13488 Glycine zipper CH53_RS08435 PF00691 OmpA family CH53_RS08445 PF07690 Major Facilitator Superfamily CH53_RS08450 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CH53_RS08450 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CH53_RS08455 PF00128 Alpha amylase, catalytic domain CH53_RS08460 PF00155 Aminotransferase class I and II CH53_RS08465 PF06826 Predicted Permease Membrane Region CH53_RS08465 PF02080 TrkA-C domain CH53_RS08470 PF00011 Hsp20/alpha crystallin family CH53_RS08475 PF00011 Hsp20/alpha crystallin family CH53_RS08480 PF07119 Protein of unknown function (DUF1375) CH53_RS08485 PF12566 Protein of unknown function (DUF3748) CH53_RS08485 PF07676 WD40-like Beta Propeller Repeat CH53_RS08490 PF07690 Major Facilitator Superfamily CH53_RS08495 PF13378 Enolase C-terminal domain-like CH53_RS08495 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CH53_RS08500 PF01081 KDPG and KHG aldolase CH53_RS08505 PF05035 2-keto-3-deoxy-galactonokinase CH53_RS08510 PF07729 FCD domain CH53_RS08510 PF00392 Bacterial regulatory proteins, gntR family CH53_RS08515 PF08348 YheO-like PAS domain CH53_RS08515 PF13309 HTH domain CH53_RS08520 PF00291 Pyridoxal-phosphate dependent enzyme CH53_RS08525 PF02423 Ornithine cyclodeaminase/mu-crystallin family CH53_RS08530 PF07702 UTRA domain CH53_RS08530 PF00392 Bacterial regulatory proteins, gntR family CH53_RS08535 PF00232 Glycosyl hydrolase family 1 CH53_RS08540 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CH53_RS08545 PF02378 Phosphotransferase system, EIIC CH53_RS08550 PF00480 ROK family CH53_RS08555 PF11471 Maltoporin periplasmic N-terminal extension CH53_RS08555 PF02264 LamB porin CH53_RS08560 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CH53_RS08570 PF01751 Toprim domain CH53_RS08570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH53_RS08570 PF18053 DNA gyrase B subunit insert domain CH53_RS08570 PF00986 DNA gyrase B subunit, carboxyl terminus CH53_RS08570 PF00204 DNA gyrase B CH53_RS08575 PF02463 RecF/RecN/SMC N terminal domain CH53_RS08580 PF02768 DNA polymerase III beta subunit, C-terminal domain CH53_RS08580 PF02767 DNA polymerase III beta subunit, central domain CH53_RS08580 PF00712 DNA polymerase III beta subunit, N-terminal domain CH53_RS08585 PF08299 Bacterial dnaA protein helix-turn-helix CH53_RS08585 PF00308 Bacterial dnaA protein CH53_RS08585 PF11638 DnaA N-terminal domain CH53_RS08595 PF00468 Ribosomal protein L34 CH53_RS08600 PF00825 Ribonuclease P CH53_RS08605 PF01809 Putative membrane protein insertion efficiency factor CH53_RS08610 PF14849 YidC periplasmic domain CH53_RS08610 PF02096 60Kd inner membrane protein CH53_RS08615 PF10396 GTP-binding protein TrmE N-terminus CH53_RS08615 PF12631 MnmE helical domain CH53_RS08615 PF01926 50S ribosome-binding GTPase CH53_RS08620 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase CH53_RS08620 PF07055 Enoyl reductase FAD binding domain CH53_RS08620 PF12241 Trans-2-enoyl-CoA reductase catalytic region CH53_RS08625 PF03180 NLPA lipoprotein CH53_RS08630 PF00005 ABC transporter CH53_RS08630 PF09383 NIL domain CH53_RS08635 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS08640 PF02203 Tar ligand binding domain homologue CH53_RS08640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CH53_RS08640 PF00672 HAMP domain CH53_RS08645 PF03358 NADPH-dependent FMN reductase CH53_RS08650 PF00989 PAS fold CH53_RS08650 PF00512 His Kinase A (phospho-acceptor) domain CH53_RS08650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH53_RS08655 PF00196 Bacterial regulatory proteins, luxR family CH53_RS08655 PF00072 Response regulator receiver domain CH53_RS08665 PF00860 Permease family CH53_RS08670 PF13419 Haloacid dehalogenase-like hydrolase CH53_RS08675 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS08680 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS08685 PF00497 Bacterial extracellular solute-binding proteins, family 3 CH53_RS08695 PF01895 PhoU domain CH53_RS08700 PF00005 ABC transporter CH53_RS08705 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS08710 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS08715 PF12849 PBP superfamily domain CH53_RS08760 PF01380 SIS domain CH53_RS08765 PF00132 Bacterial transferase hexapeptide (six repeats) CH53_RS08765 PF12804 MobA-like NTP transferase domain CH53_RS08770 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CH53_RS08770 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CH53_RS08775 PF02874 ATP synthase alpha/beta family, beta-barrel domain CH53_RS08775 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CH53_RS08780 PF00231 ATP synthase CH53_RS08785 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CH53_RS08785 PF00306 ATP synthase alpha/beta chain, C terminal domain CH53_RS08785 PF02874 ATP synthase alpha/beta family, beta-barrel domain CH53_RS08790 PF00213 ATP synthase delta (OSCP) subunit CH53_RS08795 PF00430 ATP synthase B/B' CF(0) CH53_RS08800 PF00137 ATP synthase subunit C CH53_RS08805 PF00119 ATP synthase A chain CH53_RS08810 PF03899 ATP synthase I chain CH53_RS08815 PF02527 rRNA small subunit methyltransferase G CH53_RS08820 PF01134 Glucose inhibited division protein A CH53_RS08820 PF13932 GidA associated domain CH53_RS08825 PF00258 Flavodoxin CH53_RS08830 PF01037 Lrp/AsnC ligand binding domain CH53_RS08835 PF03590 Aspartate-ammonia ligase CH53_RS08845 PF05762 VWA domain containing CoxE-like protein CH53_RS08850 PF17868 AAA lid domain CH53_RS08850 PF07728 AAA domain (dynein-related subfamily) CH53_RS08850 PF12592 Protein of unknown function (DUF3763) CH53_RS08855 PF02705 K+ potassium transporter CH53_RS08860 PF05025 RbsD / FucU transport protein family CH53_RS08865 PF00005 ABC transporter CH53_RS08870 PF02653 Branched-chain amino acid transport system / permease component CH53_RS08875 PF13407 Periplasmic binding protein domain CH53_RS08880 PF00294 pfkB family carbohydrate kinase CH53_RS08885 PF00356 Bacterial regulatory proteins, lacI family CH53_RS08890 PF07690 Major Facilitator Superfamily CH53_RS08895 PF07729 FCD domain CH53_RS08895 PF00392 Bacterial regulatory proteins, gntR family CH53_RS08920 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CH53_RS08925 PF12804 MobA-like NTP transferase domain CH53_RS08930 PF06288 Protein of unknown function (DUF1040) CH53_RS08935 PF01636 Phosphotransferase enzyme family CH53_RS08940 PF01323 DSBA-like thioredoxin domain CH53_RS08945 PF01367 5'-3' exonuclease, C-terminal SAM fold CH53_RS08945 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CH53_RS08945 PF01612 3'-5' exonuclease CH53_RS08945 PF00476 DNA polymerase family A CH53_RS08950 PF01926 50S ribosome-binding GTPase CH53_RS08955 PF04220 Der GTPase activator (YihI) CH53_RS08960 PF04055 Radical SAM superfamily CH53_RS08960 PF06969 HemN C-terminal domain CH53_RS08965 PF00158 Sigma-54 interaction domain CH53_RS08965 PF02954 Bacterial regulatory protein, Fis family CH53_RS08965 PF00072 Response regulator receiver domain CH53_RS08970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH53_RS08970 PF00512 His Kinase A (phospho-acceptor) domain CH53_RS08970 PF00989 PAS fold CH53_RS08975 PF00120 Glutamine synthetase, catalytic domain CH53_RS08975 PF03951 Glutamine synthetase, beta-Grasp domain CH53_RS08980 PF00009 Elongation factor Tu GTP binding domain CH53_RS08980 PF03144 Elongation factor Tu domain 2 CH53_RS08980 PF00679 Elongation factor G C-terminus CH53_RS08985 PF13419 Haloacid dehalogenase-like hydrolase CH53_RS08990 PF03631 Virulence factor BrkB CH53_RS08995 PF02580 D-Tyr-tRNA(Tyr) deacylase CH53_RS09000 PF00583 Acetyltransferase (GNAT) family CH53_RS09000 PF09500 Putative thioesterase (yiiD_Cterm) CH53_RS09005 PF02954 Bacterial regulatory protein, Fis family CH53_RS09005 PF00072 Response regulator receiver domain CH53_RS09005 PF00158 Sigma-54 interaction domain CH53_RS09020 PF13693 Winged helix-turn-helix DNA-binding CH53_RS09035 PF05170 AsmA family CH53_RS09040 PF00860 Permease family CH53_RS09045 PF03616 Sodium/glutamate symporter CH53_RS09050 PF00270 DEAD/DEAH box helicase CH53_RS09050 PF17191 RecG wedge domain CH53_RS09050 PF00271 Helicase conserved C-terminal domain CH53_RS09055 PF00588 SpoU rRNA Methylase family CH53_RS09055 PF12105 SpoU, rRNA methylase, C-terminal CH53_RS09060 PF04607 Region found in RelA / SpoT proteins CH53_RS09060 PF13291 ACT domain CH53_RS09060 PF02824 TGS domain CH53_RS09065 PF01192 RNA polymerase Rpb6 CH53_RS09070 PF00625 Guanylate kinase CH53_RS09075 PF03120 NAD-dependent DNA ligase OB-fold domain CH53_RS09075 PF01653 NAD-dependent DNA ligase adenylation domain CH53_RS09080 PF03458 UPF0126 domain CH53_RS09090 PF01773 Na+ dependent nucleoside transporter N-terminus CH53_RS09090 PF07662 Na+ dependent nucleoside transporter C-terminus CH53_RS09090 PF07670 Nucleoside recognition CH53_RS09095 PF00378 Enoyl-CoA hydratase/isomerase CH53_RS09100 PF00563 EAL domain CH53_RS09100 PF00990 Diguanylate cyclase, GGDEF domain CH53_RS09100 PF13426 PAS domain CH53_RS09150 PF17345 Family of unknown function (DUF5375) CH53_RS09185 PF03755 YicC-like family, N-terminal region CH53_RS09185 PF08340 Domain of unknown function (DUF1732) CH53_RS09190 PF01138 3' exoribonuclease family, domain 1 CH53_RS09190 PF03725 3' exoribonuclease family, domain 2 CH53_RS09195 PF00156 Phosphoribosyl transferase domain CH53_RS09200 PF00440 Bacterial regulatory proteins, tetR family CH53_RS09205 PF00692 dUTPase CH53_RS09210 PF04127 DNA / pantothenate metabolism flavoprotein CH53_RS09210 PF02441 Flavoprotein CH53_RS09215 PF04002 RadC-like JAB domain CH53_RS09220 PF00830 Ribosomal L28 family CH53_RS09225 PF00471 Ribosomal protein L33 CH53_RS09230 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CH53_RS09230 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CH53_RS09230 PF06827 Zinc finger found in FPG and IleRS CH53_RS09235 PF01467 Cytidylyltransferase-like CH53_RS09240 PF00535 Glycosyl transferase family 2 CH53_RS09245 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CH53_RS09250 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CH53_RS09255 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CH53_RS09260 PF01370 NAD dependent epimerase/dehydratase family CH53_RS09265 PF00155 Aminotransferase class I and II CH53_RS09270 PF08240 Alcohol dehydrogenase GroES-like domain CH53_RS09270 PF00107 Zinc-binding dehydrogenase CH53_RS09275 PF04748 Divergent polysaccharide deacetylase CH53_RS09280 PF01551 Peptidase family M23 CH53_RS09285 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CH53_RS09285 PF01676 Metalloenzyme superfamily CH53_RS09290 PF00581 Rhodanese-like domain CH53_RS09295 PF00462 Glutaredoxin CH53_RS09300 PF02556 Preprotein translocase subunit SecB CH53_RS09305 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CH53_RS09305 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CH53_RS09310 PF06426 Serine acetyltransferase, N-terminal CH53_RS09310 PF00132 Bacterial transferase hexapeptide (six repeats) CH53_RS09315 PF00588 SpoU rRNA Methylase family CH53_RS09320 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CH53_RS09320 PF12833 Helix-turn-helix domain CH53_RS09320 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CH53_RS09320 PF02805 Metal binding domain of Ada CH53_RS09325 PF16527 Two-component sensor protein CpxA, periplasmic domain CH53_RS09325 PF00672 HAMP domain CH53_RS09325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH53_RS09325 PF00512 His Kinase A (phospho-acceptor) domain CH53_RS09330 PF00072 Response regulator receiver domain CH53_RS09330 PF00486 Transcriptional regulatory protein, C terminal CH53_RS09335 PF07813 LTXXQ motif family protein CH53_RS09345 PF05973 Phage derived protein Gp49-like (DUF891) CH53_RS09355 PF01545 Cation efflux family CH53_RS09355 PF16916 Dimerisation domain of Zinc Transporter CH53_RS09360 PF00365 Phosphofructokinase CH53_RS09370 PF00121 Triosephosphate isomerase CH53_RS09375 PF07305 Protein of unknown function (DUF1454) CH53_RS09380 PF05656 Protein of unknown function (DUF805) CH53_RS09385 PF00175 Oxidoreductase NAD-binding domain CH53_RS09385 PF00970 Oxidoreductase FAD-binding domain CH53_RS09390 PF07690 Major Facilitator Superfamily CH53_RS09395 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CH53_RS09400 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CH53_RS09400 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CH53_RS09405 PF00230 Major intrinsic protein CH53_RS09410 PF06005 Cell division protein ZapB CH53_RS09415 PF03737 Aldolase/RraA CH53_RS09420 PF01040 UbiA prenyltransferase family CH53_RS09425 PF10431 C-terminal, D2-small domain, of ClpB protein CH53_RS09425 PF07724 AAA domain (Cdc48 subfamily) CH53_RS09425 PF00004 ATPase family associated with various cellular activities (AAA) CH53_RS09430 PF00227 Proteasome subunit CH53_RS09435 PF05036 Sporulation related domain CH53_RS09440 PF00356 Bacterial regulatory proteins, lacI family CH53_RS09445 PF18074 Primosomal protein N C-terminal domain CH53_RS09445 PF00271 Helicase conserved C-terminal domain CH53_RS09445 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CH53_RS09445 PF17764 3′ DNA-binding domain (3′BD) CH53_RS09445 PF00270 DEAD/DEAH box helicase CH53_RS09450 PF01197 Ribosomal protein L31 CH53_RS09455 PF01340 Met Apo-repressor, MetJ CH53_RS09460 PF01053 Cys/Met metabolism PLP-dependent enzyme CH53_RS09465 PF00696 Amino acid kinase family CH53_RS09465 PF03447 Homoserine dehydrogenase, NAD binding domain CH53_RS09465 PF00742 Homoserine dehydrogenase CH53_RS09470 PF02219 Methylenetetrahydrofolate reductase CH53_RS09475 PF00311 Phosphoenolpyruvate carboxylase CH53_RS09480 PF07687 Peptidase dimerisation domain CH53_RS09480 PF01546 Peptidase family M20/M25/M40 CH53_RS09485 PF02774 Semialdehyde dehydrogenase, dimerisation domain CH53_RS09485 PF01118 Semialdehyde dehydrogenase, NAD binding domain CH53_RS09490 PF00696 Amino acid kinase family CH53_RS09495 PF14698 Argininosuccinate lyase C-terminal CH53_RS09495 PF00206 Lyase CH53_RS09520 PF00664 ABC transporter transmembrane region CH53_RS09520 PF00005 ABC transporter CH53_RS09525 PF00529 HlyD membrane-fusion protein of T1SS CH53_RS09545 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CH53_RS09545 PF07992 Pyridine nucleotide-disulphide oxidoreductase CH53_RS09550 PF08534 Redoxin CH53_RS09550 PF00462 Glutaredoxin CH53_RS09555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH53_RS09555 PF03466 LysR substrate binding domain CH53_RS09560 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CH53_RS09560 PF07992 Pyridine nucleotide-disulphide oxidoreductase CH53_RS09565 PF00440 Bacterial regulatory proteins, tetR family CH53_RS09570 PF07226 Protein of unknown function (DUF1422) CH53_RS09575 PF05958 tRNA (Uracil-5-)-methyltransferase CH53_RS09580 PF07715 TonB-dependent Receptor Plug Domain CH53_RS09580 PF00593 TonB dependent receptor CH53_RS09585 PF01177 Asp/Glu/Hydantoin racemase CH53_RS09625 PF13407 Periplasmic binding protein domain CH53_RS09630 PF00005 ABC transporter CH53_RS09635 PF02653 Branched-chain amino acid transport system / permease component CH53_RS09640 PF02653 Branched-chain amino acid transport system / permease component CH53_RS09645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH53_RS09645 PF03466 LysR substrate binding domain CH53_RS09650 PF04219 Protein of unknown function, DUF CH53_RS09655 PF01078 Magnesium chelatase, subunit ChlI CH53_RS09655 PF13335 Magnesium chelatase, subunit ChlI C-terminal CH53_RS09660 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CH53_RS09660 PF00205 Thiamine pyrophosphate enzyme, central domain CH53_RS09660 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CH53_RS09670 PF01063 Amino-transferase class IV CH53_RS09675 PF00920 Dehydratase family CH53_RS09680 PF00585 C-terminal regulatory domain of Threonine dehydratase CH53_RS09680 PF00291 Pyridoxal-phosphate dependent enzyme CH53_RS09690 PF03466 LysR substrate binding domain CH53_RS09690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH53_RS09695 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CH53_RS09695 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CH53_RS09705 PF02753 Pili assembly chaperone PapD, C-terminal domain CH53_RS09705 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CH53_RS09715 PF00577 Outer membrane usher protein CH53_RS09715 PF13954 PapC N-terminal domain CH53_RS09715 PF13953 PapC C-terminal domain CH53_RS09720 PF02753 Pili assembly chaperone PapD, C-terminal domain CH53_RS09720 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CH53_RS09735 PF13361 UvrD-like helicase C-terminal domain CH53_RS09735 PF00580 UvrD/REP helicase N-terminal domain CH53_RS09740 PF00295 Glycosyl hydrolases family 28 CH53_RS09745 PF02541 Ppx/GppA phosphatase family CH53_RS09750 PF00270 DEAD/DEAH box helicase CH53_RS09750 PF00271 Helicase conserved C-terminal domain CH53_RS09755 PF00085 Thioredoxin CH53_RS09760 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CH53_RS09760 PF07497 Rho termination factor, RNA-binding domain CH53_RS09760 PF07498 Rho termination factor, N-terminal domain CH53_RS09765 PF00953 Glycosyl transferase family 4 CH53_RS09770 PF02706 Chain length determinant protein CH53_RS09775 PF02350 UDP-N-acetylglucosamine 2-epimerase CH53_RS09780 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CH53_RS09780 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CH53_RS09780 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CH53_RS09785 PF16363 GDP-mannose 4,6 dehydratase CH53_RS09790 PF00483 Nucleotidyl transferase CH53_RS09800 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CH53_RS09805 PF01943 Polysaccharide biosynthesis protein CH53_RS09810 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 CH53_RS09815 PF06899 WzyE protein, O-antigen assembly polymerase CH53_RS09820 PF03808 Glycosyl transferase WecB/TagA/CpsF family CH53_RS09825 PF00324 Amino acid permease CH53_RS09850 PF07219 HemY protein N-terminus CH53_RS09850 PF07719 Tetratricopeptide repeat CH53_RS09855 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase CH53_RS09860 PF02602 Uroporphyrinogen-III synthase HemD CH53_RS09865 PF03900 Porphobilinogen deaminase, C-terminal domain CH53_RS09865 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CH53_RS09870 PF12633 Adenylate cyclase NT domain CH53_RS09870 PF01295 Adenylate cyclase, class-I CH53_RS09875 PF01491 Frataxin-like domain CH53_RS09880 PF13627 Prokaryotic lipoprotein-attachment site CH53_RS09885 PF01678 Diaminopimelate epimerase CH53_RS09890 PF04340 Protein of unknown function, DUF484 CH53_RS09895 PF00589 Phage integrase family CH53_RS09895 PF02899 Phage integrase, N-terminal SAM-like domain CH53_RS09900 PF13419 Haloacid dehalogenase-like hydrolase CH53_RS09905 PF00580 UvrD/REP helicase N-terminal domain CH53_RS09905 PF13361 UvrD-like helicase C-terminal domain CH53_RS09920 PF09370 Phosphoenolpyruvate hydrolase-like CH53_RS09930 PF01544 CorA-like Mg2+ transporter protein CH53_RS09935 PF00892 EamA-like transporter family CH53_RS09940 PF03061 Thioesterase superfamily CH53_RS09945 PF02253 Phospholipase A1 CH53_RS09950 PF16124 RecQ zinc-binding CH53_RS09950 PF00570 HRDC domain CH53_RS09950 PF00271 Helicase conserved C-terminal domain CH53_RS09950 PF00270 DEAD/DEAH box helicase CH53_RS09950 PF09382 RQC domain CH53_RS09955 PF01810 LysE type translocator CH53_RS09960 PF01810 LysE type translocator CH53_RS09965 PF12146 Serine aminopeptidase, S33 CH53_RS09975 PF03009 Glycerophosphoryl diester phosphodiesterase family CH53_RS09980 PF07690 Major Facilitator Superfamily CH53_RS09985 PF01266 FAD dependent oxidoreductase CH53_RS09985 PF04324 BFD-like [2Fe-2S] binding domain CH53_RS09990 PF00890 FAD binding domain CH53_RS09995 PF02754 Cysteine-rich domain CH53_RS09995 PF13183 4Fe-4S dicluster domain CH53_RS10000 PF08786 DcrB CH53_RS10005 PF02592 Putative vitamin uptake transporter CH53_RS10010 PF01206 Sulfurtransferase TusA CH53_RS10015 PF00403 Heavy-metal-associated domain CH53_RS10020 PF07947 YhhN family CH53_RS10035 PF06611 Protein of unknown function (DUF1145) CH53_RS10045 PF02881 SRP54-type protein, helical bundle domain CH53_RS10045 PF00448 SRP54-type protein, GTPase domain CH53_RS10050 PF00005 ABC transporter CH53_RS10055 PF02687 FtsX-like permease family CH53_RS10055 PF18075 FtsX extracellular domain CH53_RS10060 PF04542 Sigma-70 region 2 CH53_RS10060 PF04545 Sigma-70, region 4 CH53_RS10060 PF00140 Sigma-70 factor, region 1.2 CH53_RS10065 PF12568 Acetyltransferase (GNAT) domain, PanZ CH53_RS10070 PF13458 Periplasmic binding protein CH53_RS10075 PF02653 Branched-chain amino acid transport system / permease component CH53_RS10080 PF11862 Domain of unknown function (DUF3382) CH53_RS10080 PF02653 Branched-chain amino acid transport system / permease component CH53_RS10085 PF00005 ABC transporter CH53_RS10085 PF12399 Branched-chain amino acid ATP-binding cassette transporter CH53_RS10090 PF00005 ABC transporter CH53_RS10125 PF13416 Bacterial extracellular solute-binding protein CH53_RS10130 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS10135 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS10140 PF17912 MalK OB fold domain CH53_RS10140 PF00005 ABC transporter CH53_RS10145 PF03009 Glycerophosphoryl diester phosphodiesterase family CH53_RS10150 PF03547 Membrane transport protein CH53_RS10155 PF00892 EamA-like transporter family CH53_RS10160 PF03466 LysR substrate binding domain CH53_RS10160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH53_RS10165 PF08267 Cobalamin-independent synthase, N-terminal domain CH53_RS10165 PF01717 Cobalamin-independent synthase, Catalytic domain CH53_RS10170 PF01738 Dienelactone hydrolase family CH53_RS10175 PF01048 Phosphorylase superfamily CH53_RS10185 PF13722 5TM C-terminal transporter carbon starvation CstA CH53_RS10185 PF02554 Carbon starvation protein CstA CH53_RS10190 PF09335 SNARE associated Golgi protein CH53_RS10195 PF02646 RmuC family CH53_RS10200 PF01209 ubiE/COQ5 methyltransferase family CH53_RS10205 PF02036 SCP-2 sterol transfer family CH53_RS10210 PF03109 ABC1 family CH53_RS10215 PF02416 mttA/Hcf106 family CH53_RS10225 PF00902 Sec-independent protein translocase protein (TatC) CH53_RS10230 PF01026 TatD related DNase CH53_RS10235 PF00490 Delta-aminolevulinic acid dehydratase CH53_RS10240 PF02357 Transcription termination factor nusG CH53_RS10245 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CH53_RS10250 PF00175 Oxidoreductase NAD-binding domain CH53_RS10250 PF00970 Oxidoreductase FAD-binding domain CH53_RS10255 PF02803 Thiolase, C-terminal domain CH53_RS10255 PF00108 Thiolase, N-terminal domain CH53_RS10260 PF00378 Enoyl-CoA hydratase/isomerase CH53_RS10260 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CH53_RS10260 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CH53_RS10265 PF00557 Metallopeptidase family M24 CH53_RS10270 PF09186 Domain of unknown function (DUF1949) CH53_RS10270 PF01205 Uncharacterized protein family UPF0029 CH53_RS10275 PF02386 Cation transport protein CH53_RS10280 PF12724 Flavodoxin domain CH53_RS10305 PF01565 FAD binding domain CH53_RS10305 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CH53_RS10310 PF03099 Biotin/lipoate A/B protein ligase family CH53_RS10310 PF08279 HTH domain CH53_RS10310 PF02237 Biotin protein ligase C terminal domain CH53_RS10315 PF00485 Phosphoribulokinase / Uridine kinase family CH53_RS10320 PF13673 Acetyltransferase (GNAT) domain CH53_RS10345 PF03144 Elongation factor Tu domain 2 CH53_RS10345 PF00009 Elongation factor Tu GTP binding domain CH53_RS10345 PF03143 Elongation factor Tu C-terminal domain CH53_RS10350 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CH53_RS10355 PF00467 KOW motif CH53_RS10355 PF02357 Transcription termination factor nusG CH53_RS10360 PF00298 Ribosomal protein L11, RNA binding domain CH53_RS10360 PF03946 Ribosomal protein L11, N-terminal domain CH53_RS10365 PF00687 Ribosomal protein L1p/L10e family CH53_RS10370 PF00466 Ribosomal protein L10 CH53_RS10375 PF00542 Ribosomal protein L7/L12 C-terminal domain CH53_RS10375 PF16320 Ribosomal protein L7/L12 dimerisation domain CH53_RS10380 PF04565 RNA polymerase Rpb2, domain 3 CH53_RS10380 PF10385 RNA polymerase beta subunit external 1 domain CH53_RS10380 PF04563 RNA polymerase beta subunit CH53_RS10380 PF04561 RNA polymerase Rpb2, domain 2 CH53_RS10380 PF04560 RNA polymerase Rpb2, domain 7 CH53_RS10380 PF00562 RNA polymerase Rpb2, domain 6 CH53_RS10385 PF04983 RNA polymerase Rpb1, domain 3 CH53_RS10385 PF05000 RNA polymerase Rpb1, domain 4 CH53_RS10385 PF00623 RNA polymerase Rpb1, domain 2 CH53_RS10385 PF04997 RNA polymerase Rpb1, domain 1 CH53_RS10385 PF04998 RNA polymerase Rpb1, domain 5 CH53_RS10390 PF06968 Biotin and Thiamin Synthesis associated domain CH53_RS10390 PF04055 Radical SAM superfamily CH53_RS10395 PF05690 Thiazole biosynthesis protein ThiG CH53_RS10400 PF02597 ThiS family CH53_RS10405 PF00899 ThiF family CH53_RS10410 PF02581 Thiamine monophosphate synthase CH53_RS10415 PF01964 Radical SAM ThiC family CH53_RS10415 PF13667 ThiC-associated domain CH53_RS10420 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ CH53_RS10425 PF00293 NUDIX domain CH53_RS10425 PF09297 NADH pyrophosphatase zinc ribbon domain CH53_RS10430 PF01208 Uroporphyrinogen decarboxylase (URO-D) CH53_RS10435 PF04493 Endonuclease V CH53_RS10440 PF04222 Protein of unknown function (DUF416) CH53_RS10445 PF00216 Bacterial DNA-binding protein CH53_RS10450 PF07356 Protein of unknown function (DUF1481) CH53_RS10455 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CH53_RS10455 PF02843 Phosphoribosylglycinamide synthetase, C domain CH53_RS10455 PF02844 Phosphoribosylglycinamide synthetase, N domain CH53_RS10460 PF01808 AICARFT/IMPCHase bienzyme CH53_RS10460 PF02142 MGS-like domain CH53_RS10500 PF04204 Homoserine O-succinyltransferase CH53_RS10505 PF01274 Malate synthase CH53_RS10510 PF00463 Isocitrate lyase family CH53_RS10515 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) CH53_RS10520 PF02803 Thiolase, C-terminal domain CH53_RS10520 PF00108 Thiolase, N-terminal domain CH53_RS10525 PF02667 Short chain fatty acid transporter CH53_RS10530 PF01144 Coenzyme A transferase CH53_RS10535 PF01144 Coenzyme A transferase CH53_RS10540 PF02954 Bacterial regulatory protein, Fis family CH53_RS10540 PF00072 Response regulator receiver domain CH53_RS10540 PF00158 Sigma-54 interaction domain CH53_RS10545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH53_RS10545 PF00989 PAS fold CH53_RS10545 PF00512 His Kinase A (phospho-acceptor) domain CH53_RS10550 PF09339 IclR helix-turn-helix domain CH53_RS10550 PF01614 Bacterial transcriptional regulator CH53_RS10555 PF02310 B12 binding domain CH53_RS10555 PF02965 Vitamin B12 dependent methionine synthase, activation domain CH53_RS10555 PF02574 Homocysteine S-methyltransferase CH53_RS10555 PF00809 Pterin binding enzyme CH53_RS10555 PF02607 B12 binding domain CH53_RS10565 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CH53_RS10565 PF17287 POTRA domain CH53_RS10565 PF08479 POTRA domain, ShlB-type CH53_RS10570 PF01758 Sodium Bile acid symporter family CH53_RS10575 PF01842 ACT domain CH53_RS10575 PF00696 Amino acid kinase family CH53_RS10580 PF00342 Phosphoglucose isomerase CH53_RS10585 PF06146 Phosphate-starvation-inducible E CH53_RS10590 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS10595 PF14785 Maltose transport system permease protein MalF P2 domain CH53_RS10595 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS10600 PF01547 Bacterial extracellular solute-binding protein CH53_RS10605 PF00005 ABC transporter CH53_RS10605 PF17912 MalK OB fold domain CH53_RS10610 PF02264 LamB porin CH53_RS10615 PF07148 Maltose operon periplasmic protein precursor (MalM) CH53_RS10620 PF04345 Chorismate lyase CH53_RS10625 PF01040 UbiA prenyltransferase family CH53_RS10630 PF01553 Acyltransferase CH53_RS10635 PF01219 Prokaryotic diacylglycerol kinase CH53_RS10640 PF00717 Peptidase S24-like CH53_RS10640 PF01726 LexA DNA binding domain CH53_RS10645 PF05532 CsbD-like CH53_RS10650 PF01475 Ferric uptake regulator family CH53_RS10655 PF01207 Dihydrouridine synthase (Dus) CH53_RS10660 PF09583 Phage shock protein G (Phageshock_PspG) CH53_RS10665 PF08240 Alcohol dehydrogenase GroES-like domain CH53_RS10665 PF00107 Zinc-binding dehydrogenase CH53_RS10670 PF03796 DnaB-like helicase C terminal domain CH53_RS10670 PF00772 DnaB-like helicase N terminal domain CH53_RS10675 PF00842 Alanine racemase, C-terminal domain CH53_RS10675 PF01168 Alanine racemase, N-terminal domain CH53_RS10680 PF00155 Aminotransferase class I and II CH53_RS10685 PF04237 YjbR CH53_RS10690 PF17755 UvrA DNA-binding domain CH53_RS10690 PF17760 UvrA interaction domain CH53_RS10690 PF00005 ABC transporter CH53_RS10695 PF00436 Single-strand binding protein family CH53_RS10700 PF13657 HipA N-terminal domain CH53_RS10700 PF07804 HipA-like C-terminal domain CH53_RS10715 PF00860 Permease family CH53_RS10720 PF00999 Sodium/hydrogen exchanger family CH53_RS10725 PF03466 LysR substrate binding domain CH53_RS10725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH53_RS10730 PF03788 LrgA family CH53_RS10740 PF00005 ABC transporter CH53_RS10745 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS10750 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS10755 PF00497 Bacterial extracellular solute-binding proteins, family 3 CH53_RS10765 PF03279 Bacterial lipid A biosynthesis acyltransferase CH53_RS10775 PF00005 ABC transporter CH53_RS10780 PF02653 Branched-chain amino acid transport system / permease component CH53_RS10785 PF02653 Branched-chain amino acid transport system / permease component CH53_RS10790 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CH53_RS10790 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CH53_RS10795 PF00571 CBS domain CH53_RS10795 PF01380 SIS domain CH53_RS10800 PF00939 Sodium:sulfate symporter transmembrane region CH53_RS10805 PF00313 'Cold-shock' DNA-binding domain CH53_RS10810 PF00313 'Cold-shock' DNA-binding domain CH53_RS10815 PF05433 Glycine zipper 2TM domain CH53_RS10820 PF02954 Bacterial regulatory protein, Fis family CH53_RS10825 PF01207 Dihydrouridine synthase (Dus) CH53_RS10835 PF00474 Sodium:solute symporter family CH53_RS10840 PF06196 Protein of unknown function (DUF997) CH53_RS10845 PF02785 Biotin carboxylase C-terminal domain CH53_RS10845 PF00289 Biotin carboxylase, N-terminal domain CH53_RS10845 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CH53_RS10850 PF00364 Biotin-requiring enzyme CH53_RS10855 PF01220 Dehydroquinase class II CH53_RS10860 PF01794 Ferric reductase like transmembrane component CH53_RS10865 PF00174 Oxidoreductase molybdopterin binding domain CH53_RS10870 PF08240 Alcohol dehydrogenase GroES-like domain CH53_RS10870 PF00107 Zinc-binding dehydrogenase CH53_RS10875 PF00990 Diguanylate cyclase, GGDEF domain CH53_RS10875 PF17157 Gammaproteobacterial periplasmic sensor domain CH53_RS10875 PF00563 EAL domain CH53_RS10885 PF04085 rod shape-determining protein MreC CH53_RS10890 PF04093 rod shape-determining protein MreD CH53_RS10895 PF02545 Maf-like protein CH53_RS10900 PF00575 S1 RNA binding domain CH53_RS10900 PF10150 Ribonuclease E/G family CH53_RS10905 PF13502 AsmA-like C-terminal region CH53_RS10905 PF13116 Protein of unknown function CH53_RS10910 PF00795 Carbon-nitrogen hydrolase CH53_RS10915 PF01523 Putative modulator of DNA gyrase CH53_RS10920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH53_RS10920 PF03466 LysR substrate binding domain CH53_RS10925 PF07869 Protein of unknown function (DUF1656) CH53_RS10930 PF13533 Biotin-lipoyl like CH53_RS10935 PF04632 Fusaric acid resistance protein family CH53_RS10940 PF00171 Aldehyde dehydrogenase family CH53_RS10950 PF01337 Barstar (barnase inhibitor) CH53_RS10955 PF04751 Protein of unknown function (DUF615) CH53_RS10960 PF01523 Putative modulator of DNA gyrase CH53_RS10965 PF07361 Cytochrome b562 CH53_RS10970 PF14760 Rnk N-terminus CH53_RS10970 PF01272 Transcription elongation factor, GreA/GreB, C-term CH53_RS11000 PF01979 Amidohydrolase family CH53_RS11005 PF03841 L-seryl-tRNA selenium transferase CH53_RS11010 PF07071 KDGP aldolase CH53_RS11015 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CH53_RS11015 PF08279 HTH domain CH53_RS11015 PF00874 PRD domain CH53_RS11015 PF05043 Mga helix-turn-helix domain CH53_RS11020 PF01381 Helix-turn-helix CH53_RS11025 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB CH53_RS11030 PF00689 Cation transporting ATPase, C-terminus CH53_RS11030 PF00690 Cation transporter/ATPase, N-terminus CH53_RS11035 PF00356 Bacterial regulatory proteins, lacI family CH53_RS11040 PF00367 phosphotransferase system, EIIB CH53_RS11040 PF02378 Phosphotransferase system, EIIC CH53_RS11045 PF00128 Alpha amylase, catalytic domain CH53_RS11045 PF11941 Domain of unknown function (DUF3459) CH53_RS11055 PF01042 Endoribonuclease L-PSP CH53_RS11060 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain CH53_RS11060 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain CH53_RS11065 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CH53_RS11065 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CH53_RS11070 PF01370 NAD dependent epimerase/dehydratase family CH53_RS11075 PF07690 Major Facilitator Superfamily CH53_RS11080 PF00381 PTS HPr component phosphorylation site CH53_RS11085 PF03668 P-loop ATPase protein family CH53_RS11090 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CH53_RS11095 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CH53_RS11100 PF04552 Sigma-54, DNA binding domain CH53_RS11100 PF00309 Sigma-54 factor, Activator interacting domain (AID) CH53_RS11100 PF04963 Sigma-54 factor, core binding domain CH53_RS11105 PF00005 ABC transporter CH53_RS11105 PF12399 Branched-chain amino acid ATP-binding cassette transporter CH53_RS11110 PF03968 OstA-like protein CH53_RS11115 PF06835 Lipopolysaccharide-assembly, LptC-related CH53_RS11125 PF01380 SIS domain CH53_RS11125 PF00571 CBS domain CH53_RS11130 PF01699 Sodium/calcium exchanger protein CH53_RS11135 PF00005 ABC transporter CH53_RS11140 PF02405 Permease MlaE CH53_RS11145 PF02470 MlaD protein CH53_RS11150 PF05494 MlaC protein CH53_RS11155 PF13466 STAS domain CH53_RS11160 PF01722 BolA-like protein CH53_RS11165 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CH53_RS11170 PF13180 PDZ domain CH53_RS11175 PF13180 PDZ domain CH53_RS11175 PF00595 PDZ domain CH53_RS11180 PF06295 Protein of unknown function (DUF1043) CH53_RS11185 PF03969 AFG1-like ATPase CH53_RS11190 PF00572 Ribosomal protein L13 CH53_RS11195 PF00380 Ribosomal protein S9/S16 CH53_RS11200 PF02798 Glutathione S-transferase, N-terminal domain CH53_RS11200 PF00043 Glutathione S-transferase, C-terminal domain CH53_RS11205 PF04386 Stringent starvation protein B CH53_RS11215 PF07992 Pyridine nucleotide-disulphide oxidoreductase CH53_RS11215 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CH53_RS11220 PF01645 Conserved region in glutamate synthase CH53_RS11220 PF04898 Glutamate synthase central domain CH53_RS11220 PF00310 Glutamine amidotransferases class-II CH53_RS11220 PF01493 GXGXG motif CH53_RS11225 PF16199 Radical_SAM C-terminal domain CH53_RS11225 PF04055 Radical SAM superfamily CH53_RS11230 PF00072 Response regulator receiver domain CH53_RS11230 PF00989 PAS fold CH53_RS11230 PF01627 Hpt domain CH53_RS11230 PF18415 Histidine kinase receptor ArcB trans-membrane domain CH53_RS11230 PF00512 His Kinase A (phospho-acceptor) domain CH53_RS11230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH53_RS11240 PF00912 Transglycosylase CH53_RS11245 PF04972 BON domain CH53_RS11250 PF13580 SIS domain CH53_RS11255 PF02021 Uncharacterised protein family UPF0102 CH53_RS11260 PF04348 LppC putative lipoprotein CH53_RS11265 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CH53_RS11285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH53_RS11285 PF03466 LysR substrate binding domain CH53_RS11290 PF08240 Alcohol dehydrogenase GroES-like domain CH53_RS11290 PF00107 Zinc-binding dehydrogenase CH53_RS11295 PF02678 Pirin CH53_RS11295 PF17954 Quercetinase C-terminal cupin domain CH53_RS11300 PF03466 LysR substrate binding domain CH53_RS11300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH53_RS11305 PF13409 Glutathione S-transferase, N-terminal domain CH53_RS11310 PF07681 DoxX CH53_RS11315 PF13997 YqjK-like protein CH53_RS11320 PF07332 Putative Actinobacterial Holin-X, holin superfamily III CH53_RS11325 PF05957 Bacterial protein of unknown function (DUF883) CH53_RS11335 PF13721 SecD export protein N-terminal TM region CH53_RS11340 PF09335 SNARE associated Golgi protein CH53_RS11350 PF00392 Bacterial regulatory proteins, gntR family CH53_RS11350 PF07729 FCD domain CH53_RS11355 PF07690 Major Facilitator Superfamily CH53_RS11360 PF02614 Glucuronate isomerase CH53_RS11365 PF01232 Mannitol dehydrogenase Rossmann domain CH53_RS11365 PF08125 Mannitol dehydrogenase C-terminal domain CH53_RS11370 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CH53_RS11370 PF08666 SAF domain CH53_RS11375 PF10688 Bacterial inner membrane protein CH53_RS11380 PF00375 Sodium:dicarboxylate symporter family CH53_RS11385 PF03741 Integral membrane protein TerC family CH53_RS11390 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CH53_RS11395 PF01863 Protein of unknown function DUF45 CH53_RS11405 PF05175 Methyltransferase small domain CH53_RS11410 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CH53_RS11410 PF07992 Pyridine nucleotide-disulphide oxidoreductase CH53_RS11420 PF08279 HTH domain CH53_RS11420 PF13280 WYL domain CH53_RS11425 PF00892 EamA-like transporter family CH53_RS11430 PF03729 Short repeat of unknown function (DUF308) CH53_RS11435 PF07690 Major Facilitator Superfamily CH53_RS11440 PF01638 HxlR-like helix-turn-helix CH53_RS11465 PF03797 Autotransporter beta-domain CH53_RS11475 PF09134 Invasin, domain 3 CH53_RS11475 PF07979 Intimin C-type lectin domain CH53_RS11475 PF11924 Inverse autotransporter, beta-domain CH53_RS11475 PF02369 Bacterial Ig-like domain (group 1) CH53_RS11485 PF00140 Sigma-70 factor, region 1.2 CH53_RS11485 PF04545 Sigma-70, region 4 CH53_RS11485 PF04539 Sigma-70 region 3 CH53_RS11485 PF04546 Sigma-70, non-essential region CH53_RS11485 PF04542 Sigma-70 region 2 CH53_RS11485 PF03979 Sigma-70 factor, region 1.1 CH53_RS11490 PF08278 DNA primase DnaG DnaB-binding CH53_RS11490 PF10410 DnaB-helicase binding domain of primase CH53_RS11490 PF08275 DNA primase catalytic core, N-terminal domain CH53_RS11490 PF01807 CHC2 zinc finger CH53_RS11495 PF01165 Ribosomal protein S21 CH53_RS11500 PF00814 Glycoprotease family CH53_RS11510 PF02660 Glycerol-3-phosphate acyltransferase CH53_RS11515 PF02152 Dihydroneopterin aldolase CH53_RS11520 PF02673 Bacitracin resistance protein BacA CH53_RS11525 PF12627 Probable RNA and SrmB- binding site of polymerase A CH53_RS11525 PF01743 Poly A polymerase head domain CH53_RS11525 PF01966 HD domain CH53_RS11530 PF08239 Bacterial SH3 domain CH53_RS11535 PF01928 CYTH domain CH53_RS11540 PF03710 Glutamate-ammonia ligase adenylyltransferase CH53_RS11540 PF08335 GlnD PII-uridylyltransferase CH53_RS11545 PF01467 Cytidylyltransferase-like CH53_RS11545 PF00294 pfkB family carbohydrate kinase CH53_RS11550 PF13520 Amino acid permease CH53_RS11555 PF04380 Membrane fusogenic activity CH53_RS11560 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CH53_RS11565 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CH53_RS11570 PF03738 Glutathionylspermidine synthase preATP-grasp CH53_RS11575 PF06693 Protein of unknown function (DUF1190) CH53_RS11580 PF02321 Outer membrane efflux protein CH53_RS11585 PF00293 NUDIX domain CH53_RS11590 PF06853 Protein of unknown function (DUF1249) CH53_RS11595 PF00149 Calcineurin-like phosphoesterase CH53_RS11600 PF05728 Uncharacterised protein family (UPF0227) CH53_RS11605 PF01751 Toprim domain CH53_RS11605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH53_RS11605 PF00204 DNA gyrase B CH53_RS11605 PF00986 DNA gyrase B subunit, carboxyl terminus CH53_RS11610 PF03992 Antibiotic biosynthesis monooxygenase CH53_RS11615 PF02525 Flavodoxin-like fold CH53_RS11620 PF00486 Transcriptional regulatory protein, C terminal CH53_RS11620 PF00072 Response regulator receiver domain CH53_RS11625 PF00512 His Kinase A (phospho-acceptor) domain CH53_RS11625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH53_RS11625 PF00672 HAMP domain CH53_RS11630 PF01547 Bacterial extracellular solute-binding protein CH53_RS11635 PF00248 Aldo/keto reductase family CH53_RS11640 PF03466 LysR substrate binding domain CH53_RS11640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH53_RS11650 PF03613 PTS system mannose/fructose/sorbose family IID component CH53_RS11655 PF03609 PTS system sorbose-specific iic component CH53_RS11660 PF03830 PTS system sorbose subfamily IIB component CH53_RS11665 PF00521 DNA gyrase/topoisomerase IV, subunit A CH53_RS11665 PF03989 DNA gyrase C-terminal domain, beta-propeller CH53_RS11670 PF01553 Acyltransferase CH53_RS11675 PF07731 Multicopper oxidase CH53_RS11675 PF07732 Multicopper oxidase CH53_RS11690 PF08497 Radical SAM N-terminal CH53_RS11690 PF04055 Radical SAM superfamily CH53_RS11690 PF11842 Domain of unknown function (DUF3362) CH53_RS11695 PF00248 Aldo/keto reductase family CH53_RS11700 PF00465 Iron-containing alcohol dehydrogenase CH53_RS11705 PF06719 AraC-type transcriptional regulator N-terminus CH53_RS11705 PF12833 Helix-turn-helix domain CH53_RS11710 PF09335 SNARE associated Golgi protein CH53_RS11715 PF01053 Cys/Met metabolism PLP-dependent enzyme CH53_RS11720 PF01618 MotA/TolQ/ExbB proton channel family CH53_RS11725 PF02472 Biopolymer transport protein ExbD/TolR CH53_RS11760 PF00437 Type II/IV secretion system protein CH53_RS11770 PF04972 BON domain CH53_RS11770 PF13629 Pilus formation protein N terminal region CH53_RS11770 PF00263 Bacterial type II and III secretion system protein CH53_RS11795 PF13532 2OG-Fe(II) oxygenase superfamily CH53_RS11800 PF00873 AcrB/AcrD/AcrF family CH53_RS11805 PF00529 HlyD membrane-fusion protein of T1SS CH53_RS11805 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CH53_RS11825 PF11806 Domain of unknown function (DUF3327) CH53_RS11825 PF00756 Putative esterase CH53_RS11830 PF00005 ABC transporter CH53_RS11835 PF01032 FecCD transport family CH53_RS11840 PF01032 FecCD transport family CH53_RS11845 PF01497 Periplasmic binding protein CH53_RS11850 PF02203 Tar ligand binding domain homologue CH53_RS11850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CH53_RS11850 PF00672 HAMP domain CH53_RS11860 PF00771 FHIPEP family CH53_RS11865 PF00691 OmpA family CH53_RS11865 PF13677 Membrane MotB of proton-channel complex MotA/MotB CH53_RS11870 PF05433 Glycine zipper 2TM domain CH53_RS11875 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal CH53_RS11875 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CH53_RS11880 PF13247 4Fe-4S dicluster domain CH53_RS11885 PF03916 Polysulphide reductase, NrfD CH53_RS11890 PF00374 Nickel-dependent hydrogenase CH53_RS11895 PF01750 Hydrogenase maturation protease CH53_RS11900 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE CH53_RS11905 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA CH53_RS11910 PF02492 CobW/HypB/UreG, nucleotide-binding domain CH53_RS11915 PF01455 HupF/HypC family CH53_RS11920 PF01924 Hydrogenase formation hypA family CH53_RS11925 PF02769 AIR synthase related protein, C-terminal domain CH53_RS11925 PF00586 AIR synthase related protein, N-terminal domain CH53_RS11930 PF07503 HypF finger CH53_RS11930 PF01300 Telomere recombination CH53_RS11930 PF17788 HypF Kae1-like domain CH53_RS11930 PF00708 Acylphosphatase CH53_RS11935 PF02110 Hydroxyethylthiazole kinase family CH53_RS11940 PF08447 PAS fold CH53_RS11940 PF00990 Diguanylate cyclase, GGDEF domain CH53_RS11940 PF00563 EAL domain CH53_RS11940 PF08448 PAS fold CH53_RS11945 PF00324 Amino acid permease CH53_RS11950 PF06751 Ethanolamine ammonia lyase large subunit (EutB) CH53_RS11955 PF05985 Ethanolamine ammonia-lyase light chain (EutC) CH53_RS11960 PF00083 Sugar (and other) transporter CH53_RS11960 PF08946 Osmosensory transporter coiled coil CH53_RS11975 PF00990 Diguanylate cyclase, GGDEF domain CH53_RS11985 PF03806 AbgT putative transporter family CH53_RS11990 PF07687 Peptidase dimerisation domain CH53_RS11990 PF01546 Peptidase family M20/M25/M40 CH53_RS11995 PF02690 Na+/Pi-cotransporter CH53_RS12000 PF01497 Periplasmic binding protein CH53_RS12005 PF01032 FecCD transport family CH53_RS12010 PF01032 FecCD transport family CH53_RS12015 PF00005 ABC transporter CH53_RS12020 PF07715 TonB-dependent Receptor Plug Domain CH53_RS12020 PF00593 TonB dependent receptor CH53_RS12025 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) CH53_RS12030 PF06276 Ferric iron reductase FhuF-like transporter CH53_RS12030 PF04183 IucA / IucC family CH53_RS12040 PF04183 IucA / IucC family CH53_RS12040 PF06276 Ferric iron reductase FhuF-like transporter CH53_RS12070 PF00529 HlyD membrane-fusion protein of T1SS CH53_RS12070 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CH53_RS12075 PF04632 Fusaric acid resistance protein family CH53_RS12100 PF02753 Pili assembly chaperone PapD, C-terminal domain CH53_RS12100 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CH53_RS12110 PF02753 Pili assembly chaperone PapD, C-terminal domain CH53_RS12110 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CH53_RS12115 PF02753 Pili assembly chaperone PapD, C-terminal domain CH53_RS12115 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CH53_RS12120 PF13953 PapC C-terminal domain CH53_RS12120 PF13954 PapC N-terminal domain CH53_RS12120 PF00577 Outer membrane usher protein CH53_RS12145 PF01548 Transposase CH53_RS12145 PF02371 Transposase IS116/IS110/IS902 family CH53_RS12150 PF00206 Lyase CH53_RS12150 PF02655 ATP-grasp domain CH53_RS12170 PF01526 Tn3 transposase DDE domain CH53_RS12170 PF13700 Domain of unknown function (DUF4158) CH53_RS12185 PF02395 Immunoglobulin A1 protease CH53_RS12185 PF13018 Extended Signal Peptide of Type V secretion system CH53_RS12185 PF03797 Autotransporter beta-domain CH53_RS12205 PF01526 Tn3 transposase DDE domain CH53_RS12205 PF13700 Domain of unknown function (DUF4158) CH53_RS12215 PF05977 Transmembrane secretion effector CH53_RS12220 PF02574 Homocysteine S-methyltransferase CH53_RS12225 PF00324 Amino acid permease CH53_RS12230 PF16916 Dimerisation domain of Zinc Transporter CH53_RS12230 PF01545 Cation efflux family CH53_RS12240 PF00501 AMP-binding enzyme CH53_RS12265 PF01292 Prokaryotic cytochrome b561 CH53_RS12270 PF13411 MerR HTH family regulatory protein CH53_RS12280 PF00106 short chain dehydrogenase CH53_RS12310 PF00990 Diguanylate cyclase, GGDEF domain CH53_RS12310 PF00563 EAL domain CH53_RS12310 PF05231 MASE1 CH53_RS12310 PF13426 PAS domain CH53_RS12310 PF08448 PAS fold CH53_RS12310 PF08447 PAS fold CH53_RS12315 PF00294 pfkB family carbohydrate kinase CH53_RS12330 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase CH53_RS12335 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CH53_RS12335 PF00367 phosphotransferase system, EIIB CH53_RS12335 PF02378 Phosphotransferase system, EIIC CH53_RS12340 PF01418 Helix-turn-helix domain, rpiR family CH53_RS12340 PF01380 SIS domain CH53_RS12345 PF02056 Family 4 glycosyl hydrolase CH53_RS12345 PF11975 Family 4 glycosyl hydrolase C-terminal domain CH53_RS12350 PF00367 phosphotransferase system, EIIB CH53_RS12350 PF02378 Phosphotransferase system, EIIC CH53_RS12355 PF07702 UTRA domain CH53_RS12355 PF00392 Bacterial regulatory proteins, gntR family CH53_RS12360 PF03472 Autoinducer binding domain CH53_RS12360 PF00196 Bacterial regulatory proteins, luxR family CH53_RS12365 PF00765 Autoinducer synthase CH53_RS12370 PF00936 BMC domain CH53_RS12375 PF10662 Ethanolamine utilisation - propanediol utilisation CH53_RS12380 PF06249 Ethanolamine utilisation protein EutQ CH53_RS12385 PF01923 Cobalamin adenosyltransferase CH53_RS12390 PF01515 Phosphate acetyl/butaryl transferase CH53_RS12395 PF00936 BMC domain CH53_RS12400 PF03319 Ethanolamine utilisation protein EutN/carboxysome CH53_RS12405 PF00171 Aldehyde dehydrogenase family CH53_RS12415 PF00465 Iron-containing alcohol dehydrogenase CH53_RS12420 PF04346 Ethanolamine utilisation protein, EutH CH53_RS12425 PF06277 Ethanolamine utilisation protein EutA CH53_RS12430 PF06751 Ethanolamine ammonia lyase large subunit (EutB) CH53_RS12435 PF05985 Ethanolamine ammonia-lyase light chain (EutC) CH53_RS12440 PF00936 BMC domain CH53_RS12445 PF00936 BMC domain CH53_RS12445 PF16365 Ethanolamine utilization protein EutK C-terminus CH53_RS12455 PF12833 Helix-turn-helix domain CH53_RS12460 PF00294 pfkB family carbohydrate kinase CH53_RS12470 PF08244 Glycosyl hydrolases family 32 C terminal CH53_RS12470 PF00251 Glycosyl hydrolases family 32 N-terminal domain CH53_RS12480 PF08244 Glycosyl hydrolases family 32 C terminal CH53_RS12480 PF00251 Glycosyl hydrolases family 32 N-terminal domain CH53_RS12485 PF01306 LacY proton/sugar symporter CH53_RS12490 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CH53_RS12490 PF00356 Bacterial regulatory proteins, lacI family CH53_RS12505 PF00196 Bacterial regulatory proteins, luxR family CH53_RS12550 PF05947 Type VI secretion system, TssF CH53_RS12555 PF00004 ATPase family associated with various cellular activities (AAA) CH53_RS12555 PF07724 AAA domain (Cdc48 subfamily) CH53_RS12555 PF17871 AAA lid domain CH53_RS12555 PF10431 C-terminal, D2-small domain, of ClpB protein CH53_RS12560 PF16970 Type-1 fimbrial protein, A CH53_RS12565 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CH53_RS12565 PF02753 Pili assembly chaperone PapD, C-terminal domain CH53_RS12570 PF13954 PapC N-terminal domain CH53_RS12570 PF00577 Outer membrane usher protein CH53_RS12570 PF13953 PapC C-terminal domain CH53_RS12580 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 CH53_RS12585 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath CH53_RS12600 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE CH53_RS12610 PF06744 Type VI secretion protein IcmF C-terminal CH53_RS12610 PF06761 Intracellular multiplication and human macrophage-killing CH53_RS12610 PF14331 ImcF-related N-terminal domain CH53_RS12615 PF04717 Type VI secretion system, phage-baseplate injector CH53_RS12645 PF00196 Bacterial regulatory proteins, luxR family CH53_RS12650 PF00072 Response regulator receiver domain CH53_RS12650 PF00196 Bacterial regulatory proteins, luxR family CH53_RS12655 PF00497 Bacterial extracellular solute-binding proteins, family 3 CH53_RS12655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH53_RS12655 PF00512 His Kinase A (phospho-acceptor) domain CH53_RS12655 PF01627 Hpt domain CH53_RS12655 PF00072 Response regulator receiver domain CH53_RS12670 PF00484 Carbonic anhydrase CH53_RS12675 PF13683 Integrase core domain CH53_RS12675 PF13276 HTH-like domain CH53_RS12680 PF01527 Transposase CH53_RS12700 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CH53_RS12700 PF01276 Orn/Lys/Arg decarboxylase, major domain CH53_RS12700 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CH53_RS12710 PF01464 Transglycosylase SLT domain CH53_RS12710 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain CH53_RS12715 PF04362 Bacterial Fe(2+) trafficking CH53_RS12720 PF00633 Helix-hairpin-helix motif CH53_RS12720 PF00730 HhH-GPD superfamily base excision DNA repair protein CH53_RS12720 PF14815 NUDIX domain CH53_RS12720 PF10576 Iron-sulfur binding domain of endonuclease III CH53_RS12725 PF02390 Putative methyltransferase CH53_RS12730 PF04320 Protein with unknown function (DUF469) CH53_RS12735 PF04960 Glutaminase CH53_RS12740 PF11101 Protein of unknown function (DUF2884) CH53_RS12745 PF06969 HemN C-terminal domain CH53_RS12745 PF04055 Radical SAM superfamily CH53_RS12750 PF01725 Ham1 family CH53_RS12755 PF02594 Uncharacterised ACR, YggU family COG1872 CH53_RS12760 PF02325 YGGT family CH53_RS12765 PF14748 Pyrroline-5-carboxylate reductase dimerisation CH53_RS12765 PF03807 NADP oxidoreductase coenzyme F420-dependent CH53_RS12770 PF01168 Alanine racemase, N-terminal domain CH53_RS12775 PF00437 Type II/IV secretion system protein CH53_RS12780 PF04371 Porphyromonas-type peptidyl-arginine deiminase CH53_RS12785 PF00795 Carbon-nitrogen hydrolase CH53_RS12790 PF03652 Holliday junction resolvase CH53_RS12795 PF02622 Uncharacterized ACR, COG1678 CH53_RS12800 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CH53_RS12800 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CH53_RS12805 PF04452 RNA methyltransferase CH53_RS12810 PF04231 Endonuclease I CH53_RS12815 PF17283 SprT-like zinc ribbon domain CH53_RS12815 PF10263 SprT-like family CH53_RS12825 PF04143 Sulphur transport CH53_RS12835 PF02773 S-adenosylmethionine synthetase, C-terminal domain CH53_RS12835 PF00438 S-adenosylmethionine synthetase, N-terminal domain CH53_RS12835 PF02772 S-adenosylmethionine synthetase, central domain CH53_RS12840 PF17810 Arginine decarboxylase helical bundle domain CH53_RS12840 PF17944 Arginine decarboxylase C-terminal helical extension CH53_RS12840 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CH53_RS12845 PF00355 Rieske [2Fe-2S] domain CH53_RS12850 PF01435 Peptidase family M48 CH53_RS12855 PF02779 Transketolase, pyrimidine binding domain CH53_RS12855 PF00456 Transketolase, thiamine diphosphate binding domain CH53_RS12855 PF02780 Transketolase, C-terminal domain CH53_RS12860 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CH53_RS12860 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CH53_RS12865 PF00162 Phosphoglycerate kinase CH53_RS12870 PF01116 Fructose-bisphosphate aldolase class-II CH53_RS12875 PF00924 Mechanosensitive ion channel CH53_RS12875 PF05552 Conserved TM helix CH53_RS12880 PF01810 LysE type translocator CH53_RS12885 PF04402 Protein of unknown function (DUF541) CH53_RS12890 PF03466 LysR substrate binding domain CH53_RS12890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH53_RS12895 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CH53_RS12900 PF01842 ACT domain CH53_RS12900 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CH53_RS12900 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CH53_RS12905 PF01812 5-formyltetrahydrofolate cyclo-ligase family CH53_RS12910 PF05164 Cell division protein ZapA CH53_RS12915 PF03695 Uncharacterised protein family (UPF0149) CH53_RS12920 PF05195 Aminopeptidase P, N-terminal domain CH53_RS12920 PF00557 Metallopeptidase family M24 CH53_RS12925 PF01494 FAD binding domain CH53_RS12930 PF01494 FAD binding domain CH53_RS12935 PF01571 Aminomethyltransferase folate-binding domain CH53_RS12935 PF08669 Glycine cleavage T-protein C-terminal barrel domain CH53_RS12940 PF01597 Glycine cleavage H-protein CH53_RS12945 PF02347 Glycine cleavage system P-protein CH53_RS12960 PF03006 Haemolysin-III related CH53_RS12965 PF01571 Aminomethyltransferase folate-binding domain CH53_RS12970 PF03937 Flavinator of succinate dehydrogenase CH53_RS12975 PF07254 Membrane-bound toxin component of toxin-antitoxin system CH53_RS12980 PF00072 Response regulator receiver domain CH53_RS12980 PF00486 Transcriptional regulatory protein, C terminal CH53_RS12985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH53_RS12985 PF00512 His Kinase A (phospho-acceptor) domain CH53_RS12985 PF00672 HAMP domain CH53_RS12990 PF06123 Inner membrane protein CreD CH53_RS12995 PF00258 Flavodoxin CH53_RS13000 PF00589 Phage integrase family CH53_RS13000 PF02899 Phage integrase, N-terminal SAM-like domain CH53_RS13005 PF13098 Thioredoxin-like domain CH53_RS13005 PF10411 Disulfide bond isomerase protein N-terminus CH53_RS13010 PF17768 RecJ OB domain CH53_RS13010 PF01368 DHH family CH53_RS13010 PF02272 DHHA1 domain CH53_RS13015 PF03462 PCRF domain CH53_RS13015 PF00472 RF-1 domain CH53_RS13020 PF01336 OB-fold nucleic acid binding domain CH53_RS13020 PF00152 tRNA synthetases class II (D, K and N) CH53_RS13040 PF08448 PAS fold CH53_RS13040 PF00990 Diguanylate cyclase, GGDEF domain CH53_RS13045 PF01037 Lrp/AsnC ligand binding domain CH53_RS13055 PF16338 Domain of unknown function (DUF4968) CH53_RS13055 PF17137 Domain of unknown function (DUF5110) CH53_RS13055 PF13802 Galactose mutarotase-like CH53_RS13055 PF01055 Glycosyl hydrolases family 31 CH53_RS13060 PF07690 Major Facilitator Superfamily CH53_RS13070 PF00226 DnaJ domain CH53_RS13070 PF01556 DnaJ C terminal domain CH53_RS13085 PF01638 HxlR-like helix-turn-helix CH53_RS13090 PF00484 Carbonic anhydrase CH53_RS13105 PF00263 Bacterial type II and III secretion system protein CH53_RS13105 PF03958 Bacterial type II/III secretion system short domain CH53_RS13110 PF00437 Type II/IV secretion system protein CH53_RS13115 PF00482 Type II secretion system (T2SS), protein F CH53_RS13120 PF07963 Prokaryotic N-terminal methylation motif CH53_RS13120 PF08334 Type II secretion system (T2SS), protein G CH53_RS13150 PF01478 Type IV leader peptidase family CH53_RS13150 PF06750 Bacterial Peptidase A24 N-terminal domain CH53_RS13170 PF02203 Tar ligand binding domain homologue CH53_RS13170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CH53_RS13170 PF00672 HAMP domain CH53_RS13185 PF03466 LysR substrate binding domain CH53_RS13185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH53_RS13190 PF03466 LysR substrate binding domain CH53_RS13190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH53_RS13195 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CH53_RS13195 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CH53_RS13205 PF00356 Bacterial regulatory proteins, lacI family CH53_RS13210 PF00384 Molybdopterin oxidoreductase CH53_RS13210 PF01568 Molydopterin dinucleotide binding domain CH53_RS13215 PF13193 AMP-binding enzyme C-terminal domain CH53_RS13215 PF01553 Acyltransferase CH53_RS13215 PF00501 AMP-binding enzyme CH53_RS13220 PF07690 Major Facilitator Superfamily CH53_RS13225 PF00248 Aldo/keto reductase family CH53_RS13235 PF03741 Integral membrane protein TerC family CH53_RS13240 PF02976 DNA mismatch repair enzyme MutH CH53_RS13250 PF00293 NUDIX domain CH53_RS13255 PF00391 PEP-utilising enzyme, mobile domain CH53_RS13255 PF05524 PEP-utilising enzyme, N-terminal CH53_RS13255 PF02896 PEP-utilising enzyme, TIM barrel domain CH53_RS13255 PF01590 GAF domain CH53_RS13260 PF01790 Prolipoprotein diacylglyceryl transferase CH53_RS13265 PF00303 Thymidylate synthase CH53_RS13270 PF07963 Prokaryotic N-terminal methylation motif CH53_RS13275 PF07963 Prokaryotic N-terminal methylation motif CH53_RS13290 PF17946 RecC C-terminal domain CH53_RS13295 PF00675 Insulinase (Peptidase family M16) CH53_RS13295 PF16187 Middle or third domain of peptidase_M16 CH53_RS13295 PF05193 Peptidase M16 inactive domain CH53_RS13300 PF12705 PD-(D/E)XK nuclease superfamily CH53_RS13300 PF00580 UvrD/REP helicase N-terminal domain CH53_RS13300 PF13361 UvrD-like helicase C-terminal domain CH53_RS13305 PF13538 UvrD-like helicase C-terminal domain CH53_RS13310 PF00696 Amino acid kinase family CH53_RS13310 PF00583 Acetyltransferase (GNAT) family CH53_RS13315 PF11741 AMIN domain CH53_RS13315 PF01520 N-acetylmuramoyl-L-alanine amidase CH53_RS13335 PF06725 3D domain CH53_RS13335 PF03562 MltA specific insert domain CH53_RS13340 PF00899 ThiF family CH53_RS13345 PF02657 Fe-S metabolism associated domain CH53_RS13350 PF00266 Aminotransferase class-V CH53_RS13355 PF06004 Bacterial protein of unknown function (DUF903) CH53_RS13360 PF03466 LysR substrate binding domain CH53_RS13360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH53_RS13365 PF04241 Protein of unknown function (DUF423) CH53_RS13370 PF18125 RlmM ferredoxin-like domain CH53_RS13370 PF01728 FtsJ-like methyltransferase CH53_RS13375 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CH53_RS13375 PF01367 5'-3' exonuclease, C-terminal SAM fold CH53_RS13380 PF11892 Domain of unknown function (DUF3412) CH53_RS13380 PF03641 Possible lysine decarboxylase CH53_RS13380 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases CH53_RS13385 PF14489 QueF-like protein CH53_RS13385 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CH53_RS13390 PF07348 Syd protein (SUKH-2) CH53_RS13395 PF04287 tRNA pseudouridine synthase C CH53_RS13400 PF00849 RNA pseudouridylate synthase CH53_RS13405 PF00258 Flavodoxin CH53_RS13410 PF11944 Protein of unknown function (DUF3461) CH53_RS13415 PF14602 Hexapeptide repeat of succinyl-transferase CH53_RS13415 PF00132 Bacterial transferase hexapeptide (six repeats) CH53_RS13415 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CH53_RS13420 PF01842 ACT domain CH53_RS13420 PF08335 GlnD PII-uridylyltransferase CH53_RS13420 PF01966 HD domain CH53_RS13420 PF01909 Nucleotidyltransferase domain CH53_RS13425 PF00557 Metallopeptidase family M24 CH53_RS13430 PF00318 Ribosomal protein S2 CH53_RS13435 PF00889 Elongation factor TS CH53_RS13440 PF00696 Amino acid kinase family CH53_RS13445 PF01765 Ribosome recycling factor CH53_RS13450 PF13288 DXP reductoisomerase C-terminal domain CH53_RS13450 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CH53_RS13450 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CH53_RS13455 PF01255 Putative undecaprenyl diphosphate synthase CH53_RS13465 PF02163 Peptidase family M50 CH53_RS13465 PF17820 PDZ domain CH53_RS13470 PF07244 Surface antigen variable number repeat CH53_RS13470 PF01103 Surface antigen CH53_RS13475 PF03938 Outer membrane protein (OmpH-like) CH53_RS13480 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CH53_RS13480 PF00132 Bacterial transferase hexapeptide (six repeats) CH53_RS13485 PF07977 FabA-like domain CH53_RS13490 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CH53_RS13490 PF00132 Bacterial transferase hexapeptide (six repeats) CH53_RS13495 PF02684 Lipid-A-disaccharide synthetase CH53_RS13500 PF01351 Ribonuclease HII CH53_RS13505 PF07733 Bacterial DNA polymerase III alpha NTPase domain CH53_RS13505 PF14579 Helix-hairpin-helix motif CH53_RS13505 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CH53_RS13505 PF02811 PHP domain CH53_RS13505 PF01336 OB-fold nucleic acid binding domain CH53_RS13510 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CH53_RS13515 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CH53_RS13515 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CH53_RS13515 PF01276 Orn/Lys/Arg decarboxylase, major domain CH53_RS13520 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CH53_RS13525 PF09179 TilS substrate binding domain CH53_RS13525 PF11734 TilS substrate C-terminal domain CH53_RS13525 PF01171 PP-loop family CH53_RS13530 PF00034 Cytochrome c CH53_RS13535 PF07073 Modulator of Rho-dependent transcription termination (ROF) CH53_RS13540 PF06786 Uncharacterised protein family (UPF0253) CH53_RS13545 PF07152 YaeQ protein CH53_RS13550 PF00472 RF-1 domain CH53_RS13555 PF04170 NlpE N-terminal domain CH53_RS13555 PF17185 NlpE C-terminal OB domain CH53_RS13560 PF03129 Anticodon binding domain CH53_RS13560 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CH53_RS13560 PF04073 Aminoacyl-tRNA editing domain CH53_RS13565 PF01980 tRNA-methyltransferase O CH53_RS13565 PF18389 TrmO C-terminal domain CH53_RS13570 PF16358 RcsF lipoprotein CH53_RS13575 PF03180 NLPA lipoprotein CH53_RS13580 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS13585 PF00005 ABC transporter CH53_RS13585 PF09383 NIL domain CH53_RS13620 PF10043 Predicted periplasmic lipoprotein (DUF2279) CH53_RS13625 PF13091 PLD-like domain CH53_RS13630 PF00583 Acetyltransferase (GNAT) family CH53_RS13630 PF13380 CoA binding domain CH53_RS13630 PF13607 Succinyl-CoA ligase like flavodoxin domain CH53_RS13635 PF03942 DTW domain CH53_RS13640 PF00085 Thioredoxin CH53_RS13645 PF08032 RNA 2'-O ribose methyltransferase substrate binding CH53_RS13645 PF00588 SpoU rRNA Methylase family CH53_RS13650 PF07690 Major Facilitator Superfamily CH53_RS13655 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CH53_RS13655 PF00529 HlyD membrane-fusion protein of T1SS CH53_RS13660 PF01047 MarR family CH53_RS13665 PF05437 Branched-chain amino acid transport protein (AzlD) CH53_RS13670 PF03591 AzlC protein CH53_RS13675 PF07690 Major Facilitator Superfamily CH53_RS13690 PF00266 Aminotransferase class-V CH53_RS13695 PF01546 Peptidase family M20/M25/M40 CH53_RS13695 PF07687 Peptidase dimerisation domain CH53_RS13700 PF00795 Carbon-nitrogen hydrolase CH53_RS13705 PF00155 Aminotransferase class I and II CH53_RS13710 PF00596 Class II Aldolase and Adducin N-terminal domain CH53_RS13720 PF03079 ARD/ARD' family CH53_RS13725 PF01008 Initiation factor 2 subunit family CH53_RS13730 PF01636 Phosphotransferase enzyme family CH53_RS13735 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CH53_RS13735 PF08479 POTRA domain, ShlB-type CH53_RS13740 PF05860 haemagglutination activity domain CH53_RS13745 PF18254 HMW1 domain 2 CH53_RS13745 PF18071 HMW1C N-terminal CH53_RS13750 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CH53_RS13750 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CH53_RS13750 PF09317 Domain of unknown function (DUF1974) CH53_RS13755 PF13580 SIS domain CH53_RS13760 PF13230 Glutamine amidotransferases class-II CH53_RS13765 PF03734 L,D-transpeptidase catalytic domain CH53_RS13770 PF11973 NQRA C-terminal domain CH53_RS13770 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) CH53_RS13775 PF03116 NQR2, RnfD, RnfE family CH53_RS13780 PF04205 FMN-binding domain CH53_RS13785 PF02508 Rnf-Nqr subunit, membrane protein CH53_RS13790 PF02508 Rnf-Nqr subunit, membrane protein CH53_RS13795 PF00175 Oxidoreductase NAD-binding domain CH53_RS13795 PF00111 2Fe-2S iron-sulfur cluster binding domain CH53_RS13795 PF00970 Oxidoreductase FAD-binding domain CH53_RS13800 PF02424 ApbE family CH53_RS13805 PF04400 (Na+)-NQR maturation NqrM CH53_RS13810 PF03009 Glycerophosphoryl diester phosphodiesterase family CH53_RS13815 PF07478 D-ala D-ala ligase C-terminus CH53_RS13815 PF01820 D-ala D-ala ligase N-terminus CH53_RS13820 PF11798 IMS family HHH motif CH53_RS13820 PF00817 impB/mucB/samB family CH53_RS13820 PF11799 impB/mucB/samB family C-terminal domain CH53_RS13825 PF01546 Peptidase family M20/M25/M40 CH53_RS13825 PF07687 Peptidase dimerisation domain CH53_RS13830 PF00156 Phosphoribosyl transferase domain CH53_RS13835 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) CH53_RS13840 PF07417 Sigma factor-binding transcriptional regulator Crl CH53_RS13845 PF00696 Amino acid kinase family CH53_RS13845 PF01472 PUA domain CH53_RS13850 PF00171 Aldehyde dehydrogenase family CH53_RS13855 PF00294 pfkB family carbohydrate kinase CH53_RS13860 PF04227 Indigoidine synthase A like protein CH53_RS13865 PF01773 Na+ dependent nucleoside transporter N-terminus CH53_RS13865 PF07662 Na+ dependent nucleoside transporter C-terminus CH53_RS13870 PF07238 PilZ domain CH53_RS13870 PF07317 Flagellar regulator YcgR CH53_RS13875 PF10091 Putative glucoamylase CH53_RS13875 PF06165 Glycosyltransferase family 36 CH53_RS13875 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain CH53_RS13890 PF08241 Methyltransferase domain CH53_RS13905 PF01202 Shikimate kinase CH53_RS13910 PF06865 Pyrimidine/purine nucleoside phosphorylase CH53_RS13915 PF04381 Putative exonuclease, RdgC CH53_RS13920 PF00480 ROK family CH53_RS13925 PF13476 AAA domain CH53_RS13930 PF12320 Type 5 capsule protein repressor C-terminal domain CH53_RS13930 PF00149 Calcineurin-like phosphoesterase CH53_RS13935 PF00486 Transcriptional regulatory protein, C terminal CH53_RS13935 PF00072 Response regulator receiver domain CH53_RS13940 PF00512 His Kinase A (phospho-acceptor) domain CH53_RS13940 PF00989 PAS fold CH53_RS13940 PF11808 Phosphate regulon sensor protein PhoR CH53_RS13940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH53_RS13945 PF12849 PBP superfamily domain CH53_RS13950 PF05525 Branched-chain amino acid transport protein CH53_RS13955 PF00324 Amino acid permease CH53_RS13960 PF02903 Alpha amylase, N-terminal ig-like domain CH53_RS13960 PF00128 Alpha amylase, catalytic domain CH53_RS13975 PF10417 C-terminal domain of 1-Cys peroxiredoxin CH53_RS13975 PF00578 AhpC/TSA family CH53_RS13980 PF04336 Acyl carrier protein phosphodiesterase CH53_RS13985 PF02547 Queuosine biosynthesis protein CH53_RS13990 PF01702 Queuine tRNA-ribosyltransferase CH53_RS13995 PF02699 Preprotein translocase subunit CH53_RS14000 PF07549 SecD/SecF GG Motif CH53_RS14000 PF02355 Protein export membrane protein CH53_RS14000 PF13721 SecD export protein N-terminal TM region CH53_RS14005 PF02355 Protein export membrane protein CH53_RS14005 PF07549 SecD/SecF GG Motif CH53_RS14015 PF03477 ATP cone domain CH53_RS14020 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CH53_RS14020 PF01872 RibD C-terminal domain CH53_RS14025 PF00885 6,7-dimethyl-8-ribityllumazine synthase CH53_RS14030 PF01029 NusB family CH53_RS14035 PF00586 AIR synthase related protein, N-terminal domain CH53_RS14035 PF02769 AIR synthase related protein, C-terminal domain CH53_RS14040 PF04608 Phosphatidylglycerophosphatase A CH53_RS14045 PF02780 Transketolase, C-terminal domain CH53_RS14045 PF02779 Transketolase, pyrimidine binding domain CH53_RS14045 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CH53_RS14050 PF00348 Polyprenyl synthetase CH53_RS14055 PF02609 Exonuclease VII small subunit CH53_RS14060 PF02568 Thiamine biosynthesis protein (ThiI) CH53_RS14060 PF02926 THUMP domain CH53_RS14065 PF01965 DJ-1/PfpI family CH53_RS14070 PF08546 Ketopantoate reductase PanE/ApbA C terminal CH53_RS14070 PF02558 Ketopantoate reductase PanE/ApbA CH53_RS14075 PF04461 Protein of unknown function (DUF520) CH53_RS14080 PF07690 Major Facilitator Superfamily CH53_RS14085 PF01040 UbiA prenyltransferase family CH53_RS14090 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CH53_RS14095 PF00510 Cytochrome c oxidase subunit III CH53_RS14100 PF00115 Cytochrome C and Quinol oxidase polypeptide I CH53_RS14105 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CH53_RS14105 PF06481 COX Aromatic Rich Motif CH53_RS14110 PF03502 Nucleoside-specific channel-forming protein, Tsx CH53_RS14115 PF07690 Major Facilitator Superfamily CH53_RS14120 PF08139 Prokaryotic membrane lipoprotein lipid attachment site CH53_RS14120 PF03923 Uncharacterized lipoprotein CH53_RS14125 PF01722 BolA-like protein CH53_RS14130 PF05698 Bacterial trigger factor protein (TF) C-terminus CH53_RS14130 PF05697 Bacterial trigger factor protein (TF) CH53_RS14130 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CH53_RS14135 PF00574 Clp protease CH53_RS14140 PF06689 ClpX C4-type zinc finger CH53_RS14140 PF10431 C-terminal, D2-small domain, of ClpB protein CH53_RS14140 PF07724 AAA domain (Cdc48 subfamily) CH53_RS14145 PF00004 ATPase family associated with various cellular activities (AAA) CH53_RS14145 PF05362 Lon protease (S16) C-terminal proteolytic domain CH53_RS14145 PF02190 ATP-dependent protease La (LON) substrate-binding domain CH53_RS14150 PF00216 Bacterial DNA-binding protein CH53_RS14155 PF13145 PPIC-type PPIASE domain CH53_RS14170 PF06508 Queuosine biosynthesis protein QueC CH53_RS14175 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CH53_RS14175 PF12793 Sugar transport-related sRNA regulator N-term CH53_RS14190 PF01037 Lrp/AsnC ligand binding domain CH53_RS14190 PF13404 AsnC-type helix-turn-helix domain CH53_RS14195 PF00664 ABC transporter transmembrane region CH53_RS14195 PF00005 ABC transporter CH53_RS14200 PF00005 ABC transporter CH53_RS14200 PF00664 ABC transporter transmembrane region CH53_RS14205 PF00543 Nitrogen regulatory protein P-II CH53_RS14210 PF00909 Ammonium Transporter Family CH53_RS14220 PF09619 Type III secretion system lipoprotein chaperone (YscW) CH53_RS14225 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CH53_RS14230 PF05321 Haemolysin expression modulating protein CH53_RS14235 PF10757 Biofilm formation regulator YbaJ CH53_RS14245 PF00005 ABC transporter CH53_RS14250 PF00950 ABC 3 transport family CH53_RS14255 PF01297 Zinc-uptake complex component A periplasmic CH53_RS14260 PF00444 Ribosomal protein L36 CH53_RS14265 PF01197 Ribosomal protein L31 CH53_RS14270 PF00873 AcrB/AcrD/AcrF family CH53_RS14275 PF00529 HlyD membrane-fusion protein of T1SS CH53_RS14275 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CH53_RS14280 PF08361 MAATS-type transcriptional repressor, C-terminal region CH53_RS14280 PF00440 Bacterial regulatory proteins, tetR family CH53_RS14285 PF02635 DsrE/DsrF-like family CH53_RS14290 PF12794 Mechanosensitive ion channel inner membrane domain 1 CH53_RS14290 PF12795 Mechanosensitive ion channel porin domain CH53_RS14290 PF00924 Mechanosensitive ion channel CH53_RS14295 PF10689 Protein of unknown function (DUF2496) CH53_RS14305 PF04304 Protein of unknown function (DUF454) CH53_RS14310 PF00156 Phosphoribosyl transferase domain CH53_RS14320 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CH53_RS14325 PF12169 DNA polymerase III subunits gamma and tau domain III CH53_RS14325 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CH53_RS14325 PF12170 DNA polymerase III tau subunit V interacting with alpha CH53_RS14330 PF02575 YbaB/EbfC DNA-binding family CH53_RS14335 PF02132 RecR protein CH53_RS14335 PF13662 Toprim domain CH53_RS14340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH53_RS14340 PF00183 Hsp90 protein CH53_RS14345 PF05191 Adenylate kinase, active site lid CH53_RS14350 PF00762 Ferrochelatase CH53_RS14355 PF01943 Polysaccharide biosynthesis protein CH53_RS14360 PF00535 Glycosyl transferase family 2 CH53_RS14360 PF01501 Glycosyl transferase family 8 CH53_RS14365 PF00535 Glycosyl transferase family 2 CH53_RS14370 PF00534 Glycosyl transferases group 1 CH53_RS14370 PF13439 Glycosyltransferase Family 4 CH53_RS14375 PF00534 Glycosyl transferases group 1 CH53_RS14375 PF13439 Glycosyltransferase Family 4 CH53_RS14380 PF00953 Glycosyl transferase family 4 CH53_RS14385 PF02719 Polysaccharide biosynthesis protein CH53_RS14390 PF13439 Glycosyltransferase Family 4 CH53_RS14390 PF00534 Glycosyl transferases group 1 CH53_RS14395 PF16363 GDP-mannose 4,6 dehydratase CH53_RS14400 PF00294 pfkB family carbohydrate kinase CH53_RS14405 PF00999 Sodium/hydrogen exchanger family CH53_RS14405 PF02254 TrkA-N domain CH53_RS14410 PF07690 Major Facilitator Superfamily CH53_RS14415 PF02872 5'-nucleotidase, C-terminal domain CH53_RS14415 PF00149 Calcineurin-like phosphoesterase CH53_RS14420 PF04073 Aminoacyl-tRNA editing domain CH53_RS14425 PF01963 TraB family CH53_RS14430 PF00403 Heavy-metal-associated domain CH53_RS14435 PF13411 MerR HTH family regulatory protein CH53_RS14440 PF01957 NfeD-like C-terminal, partner-binding CH53_RS14445 PF16200 C-terminal region of band_7 CH53_RS14445 PF01145 SPFH domain / Band 7 family CH53_RS14450 PF00085 Thioredoxin CH53_RS14455 PF00106 short chain dehydrogenase CH53_RS14460 PF13472 GDSL-like Lipase/Acylhydrolase family CH53_RS14465 PF00005 ABC transporter CH53_RS14475 PF02222 ATP-grasp domain CH53_RS14475 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CH53_RS14480 PF00731 AIR carboxylase CH53_RS14485 PF00149 Calcineurin-like phosphoesterase CH53_RS14490 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CH53_RS14495 PF01406 tRNA synthetases class I (C) catalytic domain CH53_RS14495 PF09190 DALR domain CH53_RS14505 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CH53_RS14505 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CH53_RS14515 PF00589 Phage integrase family CH53_RS14515 PF13356 Arm DNA-binding domain CH53_RS14540 PF12833 Helix-turn-helix domain CH53_RS14540 PF02311 AraC-like ligand binding domain CH53_RS14550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH53_RS14550 PF03466 LysR substrate binding domain CH53_RS14555 PF01979 Amidohydrolase family CH53_RS14565 PF08450 SMP-30/Gluconolactonase/LRE-like region CH53_RS14585 PF03466 LysR substrate binding domain CH53_RS14585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH53_RS14590 PF03435 Saccharopine dehydrogenase NADP binding domain CH53_RS14600 PF00106 short chain dehydrogenase CH53_RS14615 PF00440 Bacterial regulatory proteins, tetR family CH53_RS14620 PF07690 Major Facilitator Superfamily CH53_RS14625 PF00440 Bacterial regulatory proteins, tetR family CH53_RS14630 PF00665 Integrase core domain CH53_RS14630 PF13936 Helix-turn-helix domain CH53_RS14650 PF07690 Major Facilitator Superfamily CH53_RS14660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH53_RS14660 PF03466 LysR substrate binding domain CH53_RS14665 PF12146 Serine aminopeptidase, S33 CH53_RS14670 PF07859 alpha/beta hydrolase fold CH53_RS14675 PF13505 Outer membrane protein beta-barrel domain CH53_RS14690 PF03230 Antirestriction protein CH53_RS14695 PF04002 RadC-like JAB domain CH53_RS14705 PF06755 CbtA_toxin of type IV toxin-antitoxin system CH53_RS14710 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A CH53_RS14720 PF00589 Phage integrase family CH53_RS14725 PF00589 Phage integrase family CH53_RS14735 PF04945 YHS domain CH53_RS14740 PF04055 Radical SAM superfamily CH53_RS14745 PF11230 Protein of unknown function (DUF3029) CH53_RS14750 PF04193 PQ loop repeat CH53_RS14760 PF11975 Family 4 glycosyl hydrolase C-terminal domain CH53_RS14760 PF02056 Family 4 glycosyl hydrolase CH53_RS14765 PF12833 Helix-turn-helix domain CH53_RS14770 PF00657 GDSL-like Lipase/Acylhydrolase CH53_RS14810 PF08548 Peptidase M10 serralysin C terminal CH53_RS14810 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) CH53_RS14810 PF00413 Matrixin CH53_RS14815 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) CH53_RS14815 PF08548 Peptidase M10 serralysin C terminal CH53_RS14815 PF00413 Matrixin CH53_RS14820 PF02974 Protease inhibitor Inh CH53_RS14825 PF00005 ABC transporter CH53_RS14825 PF00664 ABC transporter transmembrane region CH53_RS14830 PF00529 HlyD membrane-fusion protein of T1SS CH53_RS14835 PF02321 Outer membrane efflux protein CH53_RS14840 PF00849 RNA pseudouridylate synthase CH53_RS14845 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) CH53_RS14860 PF07728 AAA domain (dynein-related subfamily) CH53_RS14860 PF12102 Domain of unknown function (DUF3578) CH53_RS14875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH53_RS14875 PF03466 LysR substrate binding domain CH53_RS14890 PF00753 Metallo-beta-lactamase superfamily CH53_RS14890 PF10996 Beta-Casp domain CH53_RS14890 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CH53_RS14895 PF03466 LysR substrate binding domain CH53_RS14895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH53_RS14905 PF00873 AcrB/AcrD/AcrF family CH53_RS14920 PF02321 Outer membrane efflux protein CH53_RS14920 PF08139 Prokaryotic membrane lipoprotein lipid attachment site CH53_RS14935 PF00440 Bacterial regulatory proteins, tetR family CH53_RS14940 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CH53_RS14960 PF02447 GntP family permease CH53_RS14965 PF05247 Flagellar transcriptional activator (FlhD) CH53_RS14970 PF05280 Flagellar transcriptional activator (FlhC) CH53_RS14975 PF00480 ROK family CH53_RS14980 PF00834 Ribulose-phosphate 3 epimerase family CH53_RS14985 PF02653 Branched-chain amino acid transport system / permease component CH53_RS14990 PF00005 ABC transporter CH53_RS14995 PF13407 Periplasmic binding protein domain CH53_RS15000 PF01418 Helix-turn-helix domain, rpiR family CH53_RS15000 PF01380 SIS domain CH53_RS15005 PF02502 Ribose/Galactose Isomerase CH53_RS15015 PF09857 Putative toxin of bacterial toxin-antitoxin pair CH53_RS15020 PF08007 Cupin superfamily protein CH53_RS15025 PF00664 ABC transporter transmembrane region CH53_RS15025 PF00005 ABC transporter CH53_RS15040 PF00149 Calcineurin-like phosphoesterase CH53_RS15050 PF00196 Bacterial regulatory proteins, luxR family CH53_RS15055 PF00313 'Cold-shock' DNA-binding domain CH53_RS15060 PF00313 'Cold-shock' DNA-binding domain CH53_RS15065 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CH53_RS15070 PF05230 MASE2 domain CH53_RS15070 PF00990 Diguanylate cyclase, GGDEF domain CH53_RS15075 PF02416 mttA/Hcf106 family CH53_RS15080 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CH53_RS15080 PF04055 Radical SAM superfamily CH53_RS15085 PF03099 Biotin/lipoate A/B protein ligase family CH53_RS15090 PF04359 Protein of unknown function (DUF493) CH53_RS15095 PF00768 D-alanyl-D-alanine carboxypeptidase CH53_RS15095 PF07943 Penicillin-binding protein 5, C-terminal domain CH53_RS15100 PF03330 Lytic transglycolase CH53_RS15100 PF05036 Sporulation related domain CH53_RS15105 PF01098 Cell cycle protein CH53_RS15110 PF03717 Penicillin-binding Protein dimerisation domain CH53_RS15110 PF00905 Penicillin binding protein transpeptidase domain CH53_RS15115 PF02590 Predicted SPOUT methyltransferase CH53_RS15125 PF01467 Cytidylyltransferase-like CH53_RS15130 PF06144 DNA polymerase III, delta subunit CH53_RS15130 PF14840 Processivity clamp loader gamma complex DNA pol III C-term CH53_RS15135 PF04390 Lipopolysaccharide-assembly CH53_RS15140 PF08264 Anticodon-binding domain of tRNA CH53_RS15140 PF00133 tRNA synthetases class I (I, L, M and V) CH53_RS15140 PF13603 Leucyl-tRNA synthetase, Domain 2 CH53_RS15145 PF07295 Zinc-ribbon containing domain CH53_RS15150 PF01156 Inosine-uridine preferring nucleoside hydrolase CH53_RS15155 PF00005 ABC transporter CH53_RS15160 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS15165 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS15170 PF00497 Bacterial extracellular solute-binding proteins, family 3 CH53_RS15180 PF00795 Carbon-nitrogen hydrolase CH53_RS15185 PF03471 Transporter associated domain CH53_RS15185 PF00571 CBS domain CH53_RS15190 PF02130 Uncharacterized protein family UPF0054 CH53_RS15195 PF02562 PhoH-like protein CH53_RS15200 PF04055 Radical SAM superfamily CH53_RS15200 PF00919 Uncharacterized protein family UPF0004 CH53_RS15200 PF01938 TRAM domain CH53_RS15205 PF01494 FAD binding domain CH53_RS15250 PF13537 Glutamine amidotransferase domain CH53_RS15250 PF00733 Asparagine synthase CH53_RS15255 PF13344 Haloacid dehalogenase-like hydrolase CH53_RS15260 PF00480 ROK family CH53_RS15260 PF01047 MarR family CH53_RS15265 PF01979 Amidohydrolase family CH53_RS15270 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CH53_RS15275 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CH53_RS15275 PF00367 phosphotransferase system, EIIB CH53_RS15275 PF02378 Phosphotransferase system, EIIC CH53_RS15280 PF00749 tRNA synthetases class I (E and Q), catalytic domain CH53_RS15280 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CH53_RS15285 PF03573 outer membrane porin, OprD family CH53_RS15290 PF13982 YbfN-like lipoprotein CH53_RS15295 PF03173 Putative carbohydrate binding domain CH53_RS15295 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain CH53_RS15295 PF02838 Glycosyl hydrolase family 20, domain 2 CH53_RS15295 PF00728 Glycosyl hydrolase family 20, catalytic domain CH53_RS15300 PF01475 Ferric uptake regulator family CH53_RS15305 PF00258 Flavodoxin CH53_RS15310 PF00672 HAMP domain CH53_RS15310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CH53_RS15310 PF02203 Tar ligand binding domain homologue CH53_RS15315 PF01402 Ribbon-helix-helix protein, copG family CH53_RS15320 PF12697 Alpha/beta hydrolase family CH53_RS15325 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CH53_RS15325 PF17287 POTRA domain CH53_RS15325 PF08479 POTRA domain, ShlB-type CH53_RS15330 PF13018 Extended Signal Peptide of Type V secretion system CH53_RS15330 PF13332 Hemagglutinin repeat CH53_RS15330 PF04829 Pre-toxin domain with VENN motif CH53_RS15330 PF05860 haemagglutination activity domain CH53_RS15360 PF13610 DDE domain CH53_RS15375 PF03925 SeqA protein C-terminal domain CH53_RS15375 PF17206 SeqA protein N-terminal domain CH53_RS15380 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CH53_RS15380 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CH53_RS15380 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CH53_RS15380 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CH53_RS15390 PF00486 Transcriptional regulatory protein, C terminal CH53_RS15390 PF00072 Response regulator receiver domain CH53_RS15395 PF00512 His Kinase A (phospho-acceptor) domain CH53_RS15395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH53_RS15395 PF13493 Domain of unknown function (DUF4118) CH53_RS15395 PF13492 GAF domain CH53_RS15395 PF02702 Osmosensitive K+ channel His kinase sensor domain CH53_RS15400 PF02669 K+-transporting ATPase, c chain CH53_RS15410 PF03814 Potassium-transporting ATPase A subunit CH53_RS15415 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) CH53_RS15420 PF10725 Protein of unknown function (DUF2517) CH53_RS15425 PF08349 Protein of unknown function (DUF1722) CH53_RS15430 PF03441 FAD binding domain of DNA photolyase CH53_RS15430 PF00875 DNA photolyase CH53_RS15435 PF02112 cAMP phosphodiesterases class-II CH53_RS15440 PF01784 NIF3 (NGG1p interacting factor 3) CH53_RS15445 PF02682 Carboxyltransferase domain, subdomain C and D CH53_RS15450 PF02626 Carboxyltransferase domain, subdomain A and B CH53_RS15455 PF03746 LamB/YcsF family CH53_RS15470 PF01470 Pyroglutamyl peptidase CH53_RS15475 PF00285 Citrate synthase, C-terminal domain CH53_RS15480 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CH53_RS15485 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CH53_RS15490 PF02910 Fumarate reductase flavoprotein C-term CH53_RS15490 PF00890 FAD binding domain CH53_RS15495 PF13085 2Fe-2S iron-sulfur cluster binding domain CH53_RS15500 PF00676 Dehydrogenase E1 component CH53_RS15500 PF02779 Transketolase, pyrimidine binding domain CH53_RS15500 PF16078 2-oxoglutarate dehydrogenase N-terminus CH53_RS15500 PF16870 2-oxoglutarate dehydrogenase C-terminal CH53_RS15505 PF00364 Biotin-requiring enzyme CH53_RS15505 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CH53_RS15505 PF02817 e3 binding domain CH53_RS15510 PF00549 CoA-ligase CH53_RS15510 PF08442 ATP-grasp domain CH53_RS15515 PF02629 CoA binding domain CH53_RS15515 PF00549 CoA-ligase CH53_RS15520 PF02872 5'-nucleotidase, C-terminal domain CH53_RS15520 PF00149 Calcineurin-like phosphoesterase CH53_RS15525 PF01654 Cytochrome bd terminal oxidase subunit I CH53_RS15530 PF02322 Cytochrome bd terminal oxidase subunit II CH53_RS15535 PF08173 Membrane bound YbgT-like protein CH53_RS15540 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) CH53_RS15545 PF03061 Thioesterase superfamily CH53_RS15550 PF01618 MotA/TolQ/ExbB proton channel family CH53_RS15555 PF02472 Biopolymer transport protein ExbD/TolR CH53_RS15560 PF06519 TolA C-terminal CH53_RS15560 PF06519 TolA C-terminal CH53_RS15565 PF04052 TolB amino-terminal domain CH53_RS15565 PF07676 WD40-like Beta Propeller Repeat CH53_RS15570 PF00691 OmpA family CH53_RS15575 PF16331 TolA binding protein trimerisation CH53_RS15575 PF13174 Tetratricopeptide repeat CH53_RS15600 PF02445 Quinolinate synthetase A protein CH53_RS15605 PF04973 Nicotinamide mononucleotide transporter CH53_RS15610 PF01545 Cation efflux family CH53_RS15615 PF00512 His Kinase A (phospho-acceptor) domain CH53_RS15615 PF00072 Response regulator receiver domain CH53_RS15615 PF00989 PAS fold CH53_RS15615 PF01627 Hpt domain CH53_RS15615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH53_RS15615 PF00497 Bacterial extracellular solute-binding proteins, family 3 CH53_RS15620 PF00072 Response regulator receiver domain CH53_RS15620 PF00196 Bacterial regulatory proteins, luxR family CH53_RS15625 PF00793 DAHP synthetase I family CH53_RS15630 PF00300 Histidine phosphatase superfamily (branch 1) CH53_RS15635 PF07769 psiF repeat CH53_RS15640 PF01263 Aldose 1-epimerase CH53_RS15645 PF10509 Galactokinase galactose-binding signature CH53_RS15645 PF00288 GHMP kinases N terminal domain CH53_RS15645 PF08544 GHMP kinases C terminal CH53_RS15650 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CH53_RS15650 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CH53_RS15655 PF16363 GDP-mannose 4,6 dehydratase CH53_RS15670 PF00005 ABC transporter CH53_RS15675 PF03459 TOBE domain CH53_RS15675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH53_RS15680 PF10766 Multidrug efflux pump-associated protein AcrZ CH53_RS15690 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS15695 PF03459 TOBE domain CH53_RS15695 PF00005 ABC transporter CH53_RS15705 PF10282 Lactonase, 7-bladed beta-propeller CH53_RS15710 PF00202 Aminotransferase class-III CH53_RS15715 PF06968 Biotin and Thiamin Synthesis associated domain CH53_RS15715 PF04055 Radical SAM superfamily CH53_RS15720 PF00155 Aminotransferase class I and II CH53_RS15725 PF08241 Methyltransferase domain CH53_RS15735 PF00005 ABC transporter CH53_RS15740 PF04851 Type III restriction enzyme, res subunit CH53_RS15740 PF17757 UvrB interaction domain CH53_RS15740 PF12344 Ultra-violet resistance protein B CH53_RS15740 PF02151 UvrB/uvrC motif CH53_RS15740 PF00271 Helicase conserved C-terminal domain CH53_RS15745 PF09905 DNA-binding protein VF530 CH53_RS15750 PF01933 Uncharacterised protein family UPF0052 CH53_RS15755 PF06463 Molybdenum Cofactor Synthesis C CH53_RS15755 PF04055 Radical SAM superfamily CH53_RS15760 PF01967 MoaC family CH53_RS15765 PF02597 ThiS family CH53_RS15770 PF02391 MoaE protein CH53_RS15775 PF01027 Inhibitor of apoptosis-promoting Bax1 CH53_RS15790 PF00005 ABC transporter CH53_RS15795 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CH53_RS15800 PF00440 Bacterial regulatory proteins, tetR family CH53_RS15800 PF09209 Tetracyclin repressor-like, C-terminal domain CH53_RS15805 PF00270 DEAD/DEAH box helicase CH53_RS15805 PF00271 Helicase conserved C-terminal domain CH53_RS15810 PF01207 Dihydrouridine synthase (Dus) CH53_RS15815 PF00571 CBS domain CH53_RS15815 PF01769 Divalent cation transporter CH53_RS15815 PF03448 MgtE intracellular N domain CH53_RS15825 PF00768 D-alanyl-D-alanine carboxypeptidase CH53_RS15830 PF09330 D-lactate dehydrogenase, membrane binding CH53_RS15830 PF01565 FAD binding domain CH53_RS15835 PF01928 CYTH domain CH53_RS15840 PF01844 HNH endonuclease CH53_RS15850 PF04226 Transglycosylase associated protein CH53_RS15855 PF00005 ABC transporter CH53_RS15865 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS15870 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS15875 PF07308 Protein of unknown function (DUF1456) CH53_RS15885 PF02653 Branched-chain amino acid transport system / permease component CH53_RS15890 PF02653 Branched-chain amino acid transport system / permease component CH53_RS15895 PF00005 ABC transporter CH53_RS15895 PF12399 Branched-chain amino acid ATP-binding cassette transporter CH53_RS15900 PF00005 ABC transporter CH53_RS15905 PF00581 Rhodanese-like domain CH53_RS15910 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CH53_RS15910 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CH53_RS15920 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CH53_RS15925 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS15930 PF00005 ABC transporter CH53_RS15935 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS15950 PF03466 LysR substrate binding domain CH53_RS15950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH53_RS15960 PF00892 EamA-like transporter family CH53_RS15970 PF00267 Gram-negative porin CH53_RS15975 PF06733 DEAD_2 CH53_RS15975 PF13307 Helicase C-terminal domain CH53_RS15980 PF00230 Major intrinsic protein CH53_RS15985 PF02885 Glycosyl transferase family, helical bundle domain CH53_RS15990 PF05971 RNA methyltransferase CH53_RS15995 PF00005 ABC transporter CH53_RS16000 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS16005 PF00497 Bacterial extracellular solute-binding proteins, family 3 CH53_RS16010 PF01258 Prokaryotic dksA/traR C4-type zinc finger CH53_RS16015 PF00210 Ferritin-like domain CH53_RS16020 PF13847 Methyltransferase domain CH53_RS16025 PF00892 EamA-like transporter family CH53_RS16035 PF13505 Outer membrane protein beta-barrel domain CH53_RS16055 PF12848 ABC transporter CH53_RS16055 PF00005 ABC transporter CH53_RS16060 PF00899 ThiF family CH53_RS16065 PF03453 MoeA N-terminal region (domain I and II) CH53_RS16065 PF03454 MoeA C-terminal region (domain IV) CH53_RS16065 PF00994 Probable molybdopterin binding domain CH53_RS16075 PF00083 Sugar (and other) transporter CH53_RS16085 PF00005 ABC transporter CH53_RS16105 PF00756 Putative esterase CH53_RS16110 PF00107 Zinc-binding dehydrogenase CH53_RS16110 PF08240 Alcohol dehydrogenase GroES-like domain CH53_RS16115 PF03466 LysR substrate binding domain CH53_RS16115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH53_RS16120 PF06779 Uncharacterised MFS-type transporter YbfB CH53_RS16125 PF01227 GTP cyclohydrolase I CH53_RS16130 PF04235 Protein of unknown function (DUF418) CH53_RS16135 PF00356 Bacterial regulatory proteins, lacI family CH53_RS16140 PF13407 Periplasmic binding protein domain CH53_RS16145 PF00005 ABC transporter CH53_RS16150 PF02653 Branched-chain amino acid transport system / permease component CH53_RS16155 PF01226 Formate/nitrite transporter CH53_RS16160 PF01590 GAF domain CH53_RS16160 PF00158 Sigma-54 interaction domain CH53_RS16165 PF00384 Molybdopterin oxidoreductase CH53_RS16165 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CH53_RS16165 PF01568 Molydopterin dinucleotide binding domain CH53_RS16170 PF13247 4Fe-4S dicluster domain CH53_RS16170 PF12800 4Fe-4S binding domain CH53_RS16175 PF01750 Hydrogenase maturation protease CH53_RS16180 PF07450 Formate hydrogenlyase maturation protein HycH CH53_RS16185 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CH53_RS16190 PF12838 4Fe-4S dicluster domain CH53_RS16195 PF00374 Nickel-dependent hydrogenase CH53_RS16195 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CH53_RS16195 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CH53_RS16200 PF00361 Proton-conducting membrane transporter CH53_RS16200 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CH53_RS16205 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CH53_RS16210 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CH53_RS16210 PF00361 Proton-conducting membrane transporter CH53_RS16215 PF00146 NADH dehydrogenase CH53_RS16220 PF00361 Proton-conducting membrane transporter CH53_RS16225 PF00037 4Fe-4S binding domain CH53_RS16225 PF12798 4Fe-4S binding domain CH53_RS16230 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA CH53_RS16235 PF01455 HupF/HypC family CH53_RS16245 PF02698 DUF218 domain CH53_RS16250 PF03949 Malic enzyme, NAD binding domain CH53_RS16250 PF00390 Malic enzyme, N-terminal domain CH53_RS16255 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region CH53_RS16255 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CH53_RS16260 PF04172 LrgB-like family CH53_RS16265 PF03788 LrgA family CH53_RS16270 PF07690 Major Facilitator Superfamily CH53_RS16290 PF09334 tRNA synthetases class I (M) CH53_RS16290 PF01588 Putative tRNA binding domain CH53_RS16295 PF10609 NUBPL iron-transfer P-loop NTPase CH53_RS16300 PF00485 Phosphoribulokinase / Uridine kinase family CH53_RS16305 PF00692 dUTPase CH53_RS16310 PF05170 AsmA family CH53_RS16315 PF03606 C4-dicarboxylate anaerobic carrier CH53_RS16320 PF03741 Integral membrane protein TerC family CH53_RS16320 PF03471 Transporter associated domain CH53_RS16320 PF00571 CBS domain CH53_RS16325 PF01050 Mannose-6-phosphate isomerase CH53_RS16325 PF00483 Nucleotidyl transferase CH53_RS16330 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CH53_RS16330 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CH53_RS16330 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CH53_RS16330 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CH53_RS16340 PF00005 ABC transporter CH53_RS16370 PF13419 Haloacid dehalogenase-like hydrolase CH53_RS16385 PF16363 GDP-mannose 4,6 dehydratase CH53_RS16390 PF01370 NAD dependent epimerase/dehydratase family CH53_RS16400 PF13439 Glycosyltransferase Family 4 CH53_RS16400 PF00534 Glycosyl transferases group 1 CH53_RS16405 PF00483 Nucleotidyl transferase CH53_RS16410 PF00483 Nucleotidyl transferase CH53_RS16415 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CH53_RS16415 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CH53_RS16420 PF01502 Phosphoribosyl-AMP cyclohydrolase CH53_RS16420 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CH53_RS16425 PF00977 Histidine biosynthesis protein CH53_RS16430 PF00977 Histidine biosynthesis protein CH53_RS16435 PF00117 Glutamine amidotransferase class-I CH53_RS16440 PF00475 Imidazoleglycerol-phosphate dehydratase CH53_RS16445 PF00155 Aminotransferase class I and II CH53_RS16450 PF00815 Histidinol dehydrogenase CH53_RS16455 PF01634 ATP phosphoribosyltransferase CH53_RS16455 PF08029 HisG, C-terminal domain CH53_RS16460 PF01370 NAD dependent epimerase/dehydratase family CH53_RS16465 PF02653 Branched-chain amino acid transport system / permease component CH53_RS16470 PF00005 ABC transporter CH53_RS16475 PF00465 Iron-containing alcohol dehydrogenase CH53_RS16485 PF13520 Amino acid permease CH53_RS16490 PF08411 Exonuclease C-terminal CH53_RS16490 PF00929 Exonuclease CH53_RS16500 PF04363 Protein of unknown function (DUF496) CH53_RS16505 PF02653 Branched-chain amino acid transport system / permease component CH53_RS16510 PF02653 Branched-chain amino acid transport system / permease component CH53_RS16515 PF00005 ABC transporter CH53_RS16520 PF13407 Periplasmic binding protein domain CH53_RS16525 PF00288 GHMP kinases N terminal domain CH53_RS16530 PF00155 Aminotransferase class I and II CH53_RS16535 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CH53_RS16535 PF14824 Sirohaem biosynthesis protein central CH53_RS16535 PF10414 Sirohaem synthase dimerisation region CH53_RS16540 PF00871 Acetokinase family CH53_RS16545 PF10662 Ethanolamine utilisation - propanediol utilisation CH53_RS16550 PF00936 BMC domain CH53_RS16560 PF13237 4Fe-4S dicluster domain CH53_RS16560 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CH53_RS16560 PF10531 SLBB domain CH53_RS16560 PF13375 RnfC Barrel sandwich hybrid domain CH53_RS16565 PF00465 Iron-containing alcohol dehydrogenase CH53_RS16570 PF00171 Aldehyde dehydrogenase family CH53_RS16575 PF01923 Cobalamin adenosyltransferase CH53_RS16580 PF03319 Ethanolamine utilisation protein EutN/carboxysome CH53_RS16590 PF06130 Phosphate propanoyltransferase CH53_RS16595 PF00936 BMC domain CH53_RS16600 PF00936 BMC domain CH53_RS16610 PF08841 Diol dehydratase reactivase ATPase-like domain CH53_RS16610 PF18427 DD-reactivating factor swiveling domain CH53_RS16615 PF02287 Dehydratase small subunit CH53_RS16620 PF02288 Dehydratase medium subunit CH53_RS16625 PF02286 Dehydratase large subunit CH53_RS16630 PF00936 BMC domain CH53_RS16635 PF00936 BMC domain CH53_RS16640 PF00230 Major intrinsic protein CH53_RS16645 PF12833 Helix-turn-helix domain CH53_RS16645 PF10114 Sensory domain found in PocR CH53_RS16650 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CH53_RS16650 PF07685 CobB/CobQ-like glutamine amidotransferase domain CH53_RS16655 PF03186 CobD/Cbib protein CH53_RS16660 PF02570 Precorrin-8X methylmutase CH53_RS16665 PF01888 CbiD CH53_RS16670 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CH53_RS16675 PF05175 Methyltransferase small domain CH53_RS16680 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CH53_RS16685 PF01890 Cobalamin synthesis G C-terminus CH53_RS16685 PF11761 Cobalamin biosynthesis central region CH53_RS16685 PF11760 Cobalamin synthesis G N-terminal CH53_RS16690 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CH53_RS16695 PF02571 Precorrin-6x reductase CbiJ/CobK CH53_RS16700 PF06180 Cobalt chelatase (CbiK) CH53_RS16705 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CH53_RS16710 PF01891 Cobalt uptake substrate-specific transmembrane region CH53_RS16715 PF02553 Cobalt transport protein component CbiN CH53_RS16720 PF02361 Cobalt transport protein CH53_RS16725 PF00005 ABC transporter CH53_RS16730 PF07685 CobB/CobQ-like glutamine amidotransferase domain CH53_RS16735 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CH53_RS16740 PF02654 Cobalamin-5-phosphate synthase CH53_RS16745 PF00300 Histidine phosphatase superfamily (branch 1) CH53_RS16750 PF02277 Phosphoribosyltransferase CH53_RS16755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH53_RS16755 PF03466 LysR substrate binding domain CH53_RS16765 PF01048 Phosphorylase superfamily CH53_RS16770 PF03825 Nucleoside H+ symporter CH53_RS16775 PF00764 Arginosuccinate synthase CH53_RS16780 PF01554 MatE CH53_RS16785 PF01584 CheW-like domain CH53_RS16785 PF00072 Response regulator receiver domain CH53_RS16810 PF08220 DeoR-like helix-turn-helix domain CH53_RS16810 PF00455 DeoR C terminal sensor domain CH53_RS16815 PF08240 Alcohol dehydrogenase GroES-like domain CH53_RS16815 PF00107 Zinc-binding dehydrogenase CH53_RS16820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH53_RS16820 PF03466 LysR substrate binding domain CH53_RS16830 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath CH53_RS16845 PF00691 OmpA family CH53_RS16845 PF05736 OprF membrane domain CH53_RS16855 PF00004 ATPase family associated with various cellular activities (AAA) CH53_RS16855 PF07724 AAA domain (Cdc48 subfamily) CH53_RS16855 PF17871 AAA lid domain CH53_RS16855 PF10431 C-terminal, D2-small domain, of ClpB protein CH53_RS16870 PF04717 Type VI secretion system, phage-baseplate injector CH53_RS16870 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) CH53_RS16870 PF13296 Putative type VI secretion system Rhs element Vgr CH53_RS16935 PF02753 Pili assembly chaperone PapD, C-terminal domain CH53_RS16935 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CH53_RS16945 PF00577 Outer membrane usher protein CH53_RS16945 PF13954 PapC N-terminal domain CH53_RS16945 PF13953 PapC C-terminal domain CH53_RS16950 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CH53_RS16950 PF02753 Pili assembly chaperone PapD, C-terminal domain CH53_RS16965 PF00497 Bacterial extracellular solute-binding proteins, family 3 CH53_RS16965 PF01627 Hpt domain CH53_RS16965 PF00989 PAS fold CH53_RS16965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH53_RS16965 PF00072 Response regulator receiver domain CH53_RS16965 PF00512 His Kinase A (phospho-acceptor) domain CH53_RS16970 PF00072 Response regulator receiver domain CH53_RS16970 PF00196 Bacterial regulatory proteins, luxR family CH53_RS16980 PF00005 ABC transporter CH53_RS16980 PF08402 TOBE domain CH53_RS16985 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS16995 PF07690 Major Facilitator Superfamily CH53_RS17000 PF07730 Histidine kinase CH53_RS17000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH53_RS17000 PF05231 MASE1 CH53_RS17005 PF00072 Response regulator receiver domain CH53_RS17005 PF00196 Bacterial regulatory proteins, luxR family CH53_RS17010 PF12431 Transcriptional regulator CH53_RS17010 PF00072 Response regulator receiver domain CH53_RS17015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH53_RS17015 PF17203 Single cache domain 3 CH53_RS17015 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CH53_RS17015 PF00989 PAS fold CH53_RS17020 PF08218 Citrate lyase ligase C-terminal domain CH53_RS17025 PF06857 Malonate decarboxylase delta subunit (MdcD) CH53_RS17030 PF03328 HpcH/HpaI aldolase/citrate lyase family CH53_RS17035 PF04223 Citrate lyase, alpha subunit (CitF) CH53_RS17040 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase CH53_RS17045 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CH53_RS17050 PF00939 Sodium:sulfate symporter transmembrane region CH53_RS17055 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CH53_RS17065 PF03480 Bacterial extracellular solute-binding protein, family 7 CH53_RS17070 PF01648 4'-phosphopantetheinyl transferase superfamily CH53_RS17070 PF17837 4'-phosphopantetheinyl transferase N-terminal domain CH53_RS17075 PF00083 Sugar (and other) transporter CH53_RS17080 PF00381 PTS HPr component phosphorylation site CH53_RS17080 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CH53_RS17095 PF00356 Bacterial regulatory proteins, lacI family CH53_RS17100 PF00158 Sigma-54 interaction domain CH53_RS17100 PF00072 Response regulator receiver domain CH53_RS17100 PF02954 Bacterial regulatory protein, Fis family CH53_RS17105 PF00512 His Kinase A (phospho-acceptor) domain CH53_RS17105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH53_RS17110 PF13801 Heavy-metal resistance CH53_RS17285 PF13356 Arm DNA-binding domain CH53_RS17285 PF00589 Phage integrase family CH53_RS17295 PF07669 Eco57I restriction-modification methylase CH53_RS17300 PF13356 Arm DNA-binding domain CH53_RS17300 PF00589 Phage integrase family CH53_RS17310 PF06167 Glucose-regulated metallo-peptidase M90 CH53_RS17330 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CH53_RS17330 PF02753 Pili assembly chaperone PapD, C-terminal domain CH53_RS17335 PF13954 PapC N-terminal domain CH53_RS17335 PF13953 PapC C-terminal domain CH53_RS17335 PF00577 Outer membrane usher protein CH53_RS17345 PF02753 Pili assembly chaperone PapD, C-terminal domain CH53_RS17345 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CH53_RS17350 PF00483 Nucleotidyl transferase CH53_RS17355 PF00328 Histidine phosphatase superfamily (branch 2) CH53_RS17360 PF14001 YdfZ protein CH53_RS17370 PF01037 Lrp/AsnC ligand binding domain CH53_RS17375 PF10777 Inner membrane protein YlaC CH53_RS17380 PF00698 Acyl transferase domain CH53_RS17380 PF08240 Alcohol dehydrogenase GroES-like domain CH53_RS17380 PF00107 Zinc-binding dehydrogenase CH53_RS17380 PF02801 Beta-ketoacyl synthase, C-terminal domain CH53_RS17380 PF00109 Beta-ketoacyl synthase, N-terminal domain CH53_RS17380 PF14765 Polyketide synthase dehydratase CH53_RS17380 PF00550 Phosphopantetheine attachment site CH53_RS17380 PF16197 Ketoacyl-synthetase C-terminal extension CH53_RS17380 PF08659 KR domain CH53_RS17390 PF00703 Glycosyl hydrolases family 2 CH53_RS17390 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CH53_RS17390 PF02929 Beta galactosidase small chain CH53_RS17390 PF02837 Glycosyl hydrolases family 2, sugar binding domain CH53_RS17390 PF16353 Domain of unknown function(DUF4981) CH53_RS17395 PF00356 Bacterial regulatory proteins, lacI family CH53_RS17400 PF00313 'Cold-shock' DNA-binding domain CH53_RS17405 PF10781 Dextransucrase DSRB CH53_RS17410 PF02203 Tar ligand binding domain homologue CH53_RS17410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CH53_RS17410 PF00672 HAMP domain CH53_RS17415 PF02308 MgtC family CH53_RS17420 PF00689 Cation transporting ATPase, C-terminus CH53_RS17420 PF00690 Cation transporter/ATPase, N-terminus CH53_RS17425 PF00107 Zinc-binding dehydrogenase CH53_RS17425 PF16884 N-terminal domain of oxidoreductase CH53_RS17430 PF00582 Universal stress protein family CH53_RS17435 PF05247 Flagellar transcriptional activator (FlhD) CH53_RS17440 PF05280 Flagellar transcriptional activator (FlhC) CH53_RS17445 PF01618 MotA/TolQ/ExbB proton channel family CH53_RS17450 PF00691 OmpA family CH53_RS17450 PF13677 Membrane MotB of proton-channel complex MotA/MotB CH53_RS17455 PF09078 CheY binding CH53_RS17455 PF02895 Signal transducing histidine kinase, homodimeric domain CH53_RS17455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH53_RS17455 PF01627 Hpt domain CH53_RS17455 PF01584 CheW-like domain CH53_RS17460 PF01584 CheW-like domain CH53_RS17465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CH53_RS17465 PF00672 HAMP domain CH53_RS17465 PF02203 Tar ligand binding domain homologue CH53_RS17470 PF02203 Tar ligand binding domain homologue CH53_RS17470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CH53_RS17470 PF00672 HAMP domain CH53_RS17475 PF01739 CheR methyltransferase, SAM binding domain CH53_RS17475 PF03705 CheR methyltransferase, all-alpha domain CH53_RS17480 PF01339 CheB methylesterase CH53_RS17480 PF00072 Response regulator receiver domain CH53_RS17485 PF00072 Response regulator receiver domain CH53_RS17490 PF04344 Chemotaxis phosphatase, CheZ CH53_RS17495 PF01312 FlhB HrpN YscU SpaS Family CH53_RS17500 PF00771 FHIPEP family CH53_RS17505 PF06366 Flagellar protein FlhE CH53_RS17510 PF05130 FlgN protein CH53_RS17515 PF04316 Anti-sigma-28 factor, FlgM CH53_RS17520 PF13144 Chaperone for flagella basal body P-ring formation CH53_RS17520 PF17656 FlgA N-terminal domain CH53_RS17525 PF00460 Flagella basal body rod protein CH53_RS17530 PF00460 Flagella basal body rod protein CH53_RS17530 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CH53_RS17535 PF13861 FlgD Tudor-like domain CH53_RS17535 PF13860 FlgD Ig-like domain CH53_RS17535 PF03963 Flagellar hook capping protein - N-terminal region CH53_RS17540 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CH53_RS17540 PF00460 Flagella basal body rod protein CH53_RS17540 PF07559 Flagellar basal body protein FlaE CH53_RS17545 PF00460 Flagella basal body rod protein CH53_RS17545 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CH53_RS17550 PF00460 Flagella basal body rod protein CH53_RS17550 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CH53_RS17555 PF02107 Flagellar L-ring protein CH53_RS17560 PF02119 Flagellar P-ring protein CH53_RS17565 PF10135 Rod binding protein CH53_RS17565 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CH53_RS17570 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CH53_RS17570 PF00460 Flagella basal body rod protein CH53_RS17575 PF00669 Bacterial flagellin N-terminal helical region CH53_RS17580 PF01311 Bacterial export proteins, family 1 CH53_RS17585 PF01313 Bacterial export proteins, family 3 CH53_RS17590 PF00813 FliP family CH53_RS17595 PF04347 Flagellar biosynthesis protein, FliO CH53_RS17600 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CH53_RS17600 PF16973 Flagellar motor switch protein FliN N-terminal CH53_RS17605 PF02154 Flagellar motor switch protein FliM CH53_RS17605 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CH53_RS17610 PF03748 Flagellar basal body-associated protein FliL CH53_RS17615 PF02120 Flagellar hook-length control protein FliK CH53_RS17620 PF02050 Flagellar FliJ protein CH53_RS17625 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CH53_RS17625 PF18269 T3SS EscN ATPase C-terminal domain CH53_RS17630 PF02108 Flagellar assembly protein FliH CH53_RS17635 PF14842 FliG N-terminal domain CH53_RS17635 PF14841 FliG middle domain CH53_RS17635 PF01706 FliG C-terminal domain CH53_RS17640 PF01514 Secretory protein of YscJ/FliF family CH53_RS17640 PF08345 Flagellar M-ring protein C-terminal CH53_RS17645 PF02049 Flagellar hook-basal body complex protein FliE CH53_RS17650 PF00589 Phage integrase family CH53_RS17650 PF12167 Arm DNA-binding domain CH53_RS17695 PF00730 HhH-GPD superfamily base excision DNA repair protein CH53_RS17700 PF01966 HD domain CH53_RS17705 PF12833 Helix-turn-helix domain CH53_RS17710 PF05400 Flagellar protein FliT CH53_RS17715 PF02561 Flagellar protein FliS CH53_RS17720 PF02465 Flagellar hook-associated protein 2 N-terminus CH53_RS17720 PF07195 Flagellar hook-associated protein 2 C-terminus CH53_RS17720 PF07196 Flagellin hook IN motif CH53_RS17725 PF00669 Bacterial flagellin N-terminal helical region CH53_RS17725 PF00700 Bacterial flagellin C-terminal helical region CH53_RS17730 PF04542 Sigma-70 region 2 CH53_RS17730 PF04545 Sigma-70, region 4 CH53_RS17730 PF04539 Sigma-70 region 3 CH53_RS17735 PF02899 Phage integrase, N-terminal SAM-like domain CH53_RS17740 PF00291 Pyridoxal-phosphate dependent enzyme CH53_RS17745 PF00497 Bacterial extracellular solute-binding proteins, family 3 CH53_RS17750 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS17755 PF00005 ABC transporter CH53_RS17765 PF00171 Aldehyde dehydrogenase family CH53_RS17765 PF01619 Proline dehydrogenase CH53_RS17765 PF14850 DNA-binding domain of Proline dehydrogenase CH53_RS17765 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CH53_RS17770 PF00474 Sodium:solute symporter family CH53_RS17775 PF03239 Iron permease FTR1 family CH53_RS17780 PF09375 Imelysin CH53_RS17780 PF13473 Cupredoxin-like domain CH53_RS17785 PF04261 Dyp-type peroxidase family CH53_RS17790 PF03358 NADPH-dependent FMN reductase CH53_RS17800 PF01161 Phosphatidylethanolamine-binding protein CH53_RS17810 PF00324 Amino acid permease CH53_RS17820 PF00589 Phage integrase family CH53_RS17825 PF00990 Diguanylate cyclase, GGDEF domain CH53_RS17825 PF13185 GAF domain CH53_RS17845 PF00128 Alpha amylase, catalytic domain CH53_RS17845 PF02806 Alpha amylase, C-terminal all-beta domain CH53_RS17850 PF02203 Tar ligand binding domain homologue CH53_RS17850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CH53_RS17850 PF00672 HAMP domain CH53_RS17860 PF06942 GlpM protein CH53_RS17865 PF10769 Protein of unknown function (DUF2594) CH53_RS17870 PF00196 Bacterial regulatory proteins, luxR family CH53_RS17870 PF00072 Response regulator receiver domain CH53_RS17875 PF01541 GIY-YIG catalytic domain CH53_RS17875 PF08459 UvrC Helix-hairpin-helix N-terminal CH53_RS17875 PF02151 UvrB/uvrC motif CH53_RS17880 PF01066 CDP-alcohol phosphatidyltransferase CH53_RS17940 PF03354 Phage Terminase CH53_RS17950 PF06530 Phage antitermination protein Q CH53_RS17965 PF00561 alpha/beta hydrolase fold CH53_RS17980 PF06440 DNA polymerase III, theta subunit CH53_RS18015 PF10946 Protein of unknown function DUF2625 CH53_RS18035 PF01638 HxlR-like helix-turn-helix CH53_RS18055 PF00239 Resolvase, N terminal domain CH53_RS18055 PF07508 Recombinase CH53_RS18055 PF13408 Recombinase zinc beta ribbon domain CH53_RS18115 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CH53_RS18115 PF02753 Pili assembly chaperone PapD, C-terminal domain CH53_RS18120 PF00577 Outer membrane usher protein CH53_RS18120 PF13953 PapC C-terminal domain CH53_RS18120 PF13954 PapC N-terminal domain CH53_RS18130 PF00419 Fimbrial protein CH53_RS18150 PF00155 Aminotransferase class I and II CH53_RS18160 PF07690 Major Facilitator Superfamily CH53_RS18175 PF00072 Response regulator receiver domain CH53_RS18175 PF00196 Bacterial regulatory proteins, luxR family CH53_RS18180 PF07690 Major Facilitator Superfamily CH53_RS18185 PF14710 Respiratory nitrate reductase alpha N-terminal CH53_RS18185 PF01568 Molydopterin dinucleotide binding domain CH53_RS18185 PF00384 Molybdopterin oxidoreductase CH53_RS18190 PF14711 Respiratory nitrate reductase beta C-terminal CH53_RS18190 PF13247 4Fe-4S dicluster domain CH53_RS18195 PF02613 Nitrate reductase delta subunit CH53_RS18200 PF02665 Nitrate reductase gamma subunit CH53_RS18205 PF00324 Amino acid permease CH53_RS18210 PF03390 2-hydroxycarboxylate transporter family CH53_RS18215 PF00072 Response regulator receiver domain CH53_RS18220 PF17203 Single cache domain 3 CH53_RS18220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH53_RS18220 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CH53_RS18220 PF00989 PAS fold CH53_RS18225 PF08220 DeoR-like helix-turn-helix domain CH53_RS18225 PF00455 DeoR C terminal sensor domain CH53_RS18230 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CH53_RS18230 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CH53_RS18235 PF07005 Sugar-binding N-terminal domain CH53_RS18235 PF17042 Nucleotide-binding C-terminal domain CH53_RS18240 PF00596 Class II Aldolase and Adducin N-terminal domain CH53_RS18245 PF01261 Xylose isomerase-like TIM barrel CH53_RS18255 PF00356 Bacterial regulatory proteins, lacI family CH53_RS18260 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CH53_RS18265 PF02378 Phosphotransferase system, EIIC CH53_RS18270 PF00232 Glycosyl hydrolase family 1 CH53_RS18275 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CH53_RS18285 PF03239 Iron permease FTR1 family CH53_RS18290 PF10634 Fe2+ transport protein CH53_RS18300 PF12704 MacB-like periplasmic core domain CH53_RS18300 PF00005 ABC transporter CH53_RS18300 PF02687 FtsX-like permease family CH53_RS18310 PF00005 ABC transporter CH53_RS18310 PF12704 MacB-like periplasmic core domain CH53_RS18310 PF02687 FtsX-like permease family CH53_RS18315 PF00578 AhpC/TSA family CH53_RS18325 PF09313 Domain of unknown function (DUF1971) CH53_RS18325 PF03848 Tellurite resistance protein TehB CH53_RS18330 PF03466 LysR substrate binding domain CH53_RS18330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH53_RS18335 PF02272 DHHA1 domain CH53_RS18335 PF01411 tRNA synthetases class II (A) CH53_RS18335 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CH53_RS18340 PF01321 Creatinase/Prolidase N-terminal domain CH53_RS18340 PF00557 Metallopeptidase family M24 CH53_RS18350 PF01522 Polysaccharide deacetylase CH53_RS18350 PF14883 Hypothetical glycosyl hydrolase family 13 CH53_RS18355 PF00535 Glycosyl transferase family 2 CH53_RS18360 PF13994 PgaD-like protein CH53_RS18370 PF02562 PhoH-like protein CH53_RS18375 PF01699 Sodium/calcium exchanger protein CH53_RS18385 PF07690 Major Facilitator Superfamily CH53_RS18390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH53_RS18390 PF03466 LysR substrate binding domain CH53_RS18395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH53_RS18395 PF00672 HAMP domain CH53_RS18395 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CH53_RS18395 PF07730 Histidine kinase CH53_RS18400 PF02322 Cytochrome bd terminal oxidase subunit II CH53_RS18405 PF01654 Cytochrome bd terminal oxidase subunit I CH53_RS18410 PF00392 Bacterial regulatory proteins, gntR family CH53_RS18410 PF00155 Aminotransferase class I and II CH53_RS18415 PF00202 Aminotransferase class-III CH53_RS18420 PF04958 Arginine N-succinyltransferase beta subunit CH53_RS18425 PF00171 Aldehyde dehydrogenase family CH53_RS18430 PF04996 Succinylarginine dihydrolase CH53_RS18435 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CH53_RS18440 PF00267 Gram-negative porin CH53_RS18450 PF01979 Amidohydrolase family CH53_RS18455 PF07702 UTRA domain CH53_RS18455 PF00392 Bacterial regulatory proteins, gntR family CH53_RS18460 PF01979 Amidohydrolase family CH53_RS18470 PF13407 Periplasmic binding protein domain CH53_RS18475 PF00005 ABC transporter CH53_RS18480 PF02653 Branched-chain amino acid transport system / permease component CH53_RS18495 PF07690 Major Facilitator Superfamily CH53_RS18505 PF00440 Bacterial regulatory proteins, tetR family CH53_RS18505 PF17926 Tetracyclin repressor-like, C-terminal domain CH53_RS18510 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment CH53_RS18520 PF01476 LysM domain CH53_RS18520 PF01551 Peptidase family M23 CH53_RS18530 PF01926 50S ribosome-binding GTPase CH53_RS18530 PF06071 Protein of unknown function (DUF933) CH53_RS18540 PF01195 Peptidyl-tRNA hydrolase CH53_RS18545 PF10762 Protein of unknown function (DUF2583) CH53_RS18550 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CH53_RS18550 PF14572 Phosphoribosyl synthetase-associated domain CH53_RS18555 PF08544 GHMP kinases C terminal CH53_RS18555 PF00288 GHMP kinases N terminal domain CH53_RS18560 PF03550 Outer membrane lipoprotein LolB CH53_RS18565 PF01488 Shikimate / quinate 5-dehydrogenase CH53_RS18565 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CH53_RS18565 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CH53_RS18570 PF03462 PCRF domain CH53_RS18570 PF00472 RF-1 domain CH53_RS18575 PF13847 Methyltransferase domain CH53_RS18575 PF17827 PrmC N-terminal domain CH53_RS18580 PF04247 Invasion gene expression up-regulator, SirB CH53_RS18585 PF13369 Transglutaminase-like superfamily CH53_RS18590 PF00793 DAHP synthetase I family CH53_RS18595 PF00916 Sulfate permease family CH53_RS18595 PF01740 STAS domain CH53_RS18600 PF00990 Diguanylate cyclase, GGDEF domain CH53_RS18600 PF07694 5TMR of 5TMR-LYT CH53_RS18610 PF03009 Glycerophosphoryl diester phosphodiesterase family CH53_RS18620 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CH53_RS18625 PF02811 PHP domain CH53_RS18630 PF02613 Nitrate reductase delta subunit CH53_RS18635 PF07273 Protein of unknown function (DUF1439) CH53_RS18640 PF07690 Major Facilitator Superfamily CH53_RS18670 PF13302 Acetyltransferase (GNAT) domain CH53_RS18675 PF04337 Protein of unknown function, DUF480 CH53_RS18680 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CH53_RS18685 PF03023 Lipid II flippase MurJ CH53_RS18690 PF05746 DALR anticodon binding domain CH53_RS18690 PF03485 Arginyl tRNA synthetase N terminal domain CH53_RS18690 PF00750 tRNA synthetases class I (R) CH53_RS18695 PF06185 YecM protein CH53_RS18700 PF03932 CutC family CH53_RS18705 PF08003 Protein of unknown function (DUF1698) CH53_RS18710 PF13649 Methyltransferase domain CH53_RS18715 PF01124 MAPEG family CH53_RS18720 PF01904 Protein of unknown function DUF72 CH53_RS18725 PF00857 Isochorismatase family CH53_RS18730 PF02938 GAD domain CH53_RS18730 PF01336 OB-fold nucleic acid binding domain CH53_RS18730 PF00152 tRNA synthetases class II (D, K and N) CH53_RS18735 PF00293 NUDIX domain CH53_RS18740 PF01709 Transcriptional regulator CH53_RS18745 PF02075 Crossover junction endodeoxyribonuclease RuvC CH53_RS18750 PF07499 RuvA, C-terminal domain CH53_RS18750 PF01330 RuvA N terminal domain CH53_RS18755 PF05496 Holliday junction DNA helicase RuvB P-loop domain CH53_RS18755 PF05491 RuvB C-terminal winged helix domain CH53_RS18755 PF17864 RuvB AAA lid domain CH53_RS18760 PF00854 POT family CH53_RS18765 PF00950 ABC 3 transport family CH53_RS18770 PF00005 ABC transporter CH53_RS18775 PF01297 Zinc-uptake complex component A periplasmic CH53_RS18780 PF01476 LysM domain CH53_RS18780 PF08525 Opacity-associated protein A N-terminal motif CH53_RS18780 PF01551 Peptidase family M23 CH53_RS18785 PF03279 Bacterial lipid A biosynthesis acyltransferase CH53_RS18790 PF00224 Pyruvate kinase, barrel domain CH53_RS18790 PF02887 Pyruvate kinase, alpha/beta domain CH53_RS18795 PF01380 SIS domain CH53_RS18795 PF01418 Helix-turn-helix domain, rpiR family CH53_RS18800 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CH53_RS18800 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CH53_RS18805 PF01081 KDPG and KHG aldolase CH53_RS18810 PF00893 Small Multidrug Resistance protein CH53_RS18815 PF00893 Small Multidrug Resistance protein CH53_RS18820 PF01042 Endoribonuclease L-PSP CH53_RS18825 PF13307 Helicase C-terminal domain CH53_RS18825 PF04851 Type III restriction enzyme, res subunit CH53_RS18830 PF00814 Glycoprotease family CH53_RS18835 PF03843 Outer membrane lipoprotein Slp family CH53_RS18840 PF13193 AMP-binding enzyme C-terminal domain CH53_RS18840 PF00501 AMP-binding enzyme CH53_RS18845 PF00570 HRDC domain CH53_RS18845 PF01612 3'-5' exonuclease CH53_RS18850 PF03776 Septum formation topological specificity factor MinE CH53_RS18855 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CH53_RS18860 PF05209 Septum formation inhibitor MinC, N-terminal domain CH53_RS18860 PF03775 Septum formation inhibitor MinC, C-terminal domain CH53_RS18870 PF05166 YcgL domain CH53_RS18875 PF13406 Transglycosylase SLT domain CH53_RS18880 PF01557 Fumarylacetoacetate (FAA) hydrolase family CH53_RS18885 PF03692 Putative zinc- or iron-chelating domain CH53_RS18895 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CH53_RS18895 PF00132 Bacterial transferase hexapeptide (six repeats) CH53_RS18900 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CH53_RS18900 PF08479 POTRA domain, ShlB-type CH53_RS18900 PF17287 POTRA domain CH53_RS18905 PF13332 Hemagglutinin repeat CH53_RS18905 PF05860 haemagglutination activity domain CH53_RS18910 PF05860 haemagglutination activity domain CH53_RS18910 PF13332 Hemagglutinin repeat CH53_RS18915 PF02600 Disulfide bond formation protein DsbB CH53_RS18920 PF06450 Bacterial Na+/H+ antiporter B (NhaB) CH53_RS18925 PF07840 FadR C-terminal domain CH53_RS18925 PF00392 Bacterial regulatory proteins, gntR family CH53_RS18930 PF04293 SpoVR like protein CH53_RS18935 PF01266 FAD dependent oxidoreductase CH53_RS18940 PF00842 Alanine racemase, C-terminal domain CH53_RS18940 PF01168 Alanine racemase, N-terminal domain CH53_RS18945 PF07690 Major Facilitator Superfamily CH53_RS18950 PF13426 PAS domain CH53_RS18950 PF00990 Diguanylate cyclase, GGDEF domain CH53_RS18950 PF00563 EAL domain CH53_RS18960 PF04285 Protein of unknown function (DUF444) CH53_RS18965 PF06798 PrkA serine protein kinase C-terminal domain CH53_RS18965 PF08298 PrkA AAA domain CH53_RS18970 PF06629 MltA-interacting protein MipA CH53_RS18975 PF01263 Aldose 1-epimerase CH53_RS18980 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CH53_RS18980 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CH53_RS18985 PF01641 SelR domain CH53_RS18990 PF07023 Protein of unknown function (DUF1315) CH53_RS18995 PF00857 Isochorismatase family CH53_RS19000 PF17763 Glutaminase/Asparaginase C-terminal domain CH53_RS19000 PF00710 Asparaginase, N-terminal CH53_RS19005 PF01343 Peptidase family S49 CH53_RS19010 PF00881 Nitroreductase family CH53_RS19015 PF00586 AIR synthase related protein, N-terminal domain CH53_RS19015 PF02769 AIR synthase related protein, C-terminal domain CH53_RS19020 PF01131 DNA topoisomerase CH53_RS19020 PF01751 Toprim domain CH53_RS19025 PF07383 Protein of unknown function (DUF1496) CH53_RS19030 PF00293 NUDIX domain CH53_RS19035 PF03372 Endonuclease/Exonuclease/phosphatase family CH53_RS19040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH53_RS19040 PF03466 LysR substrate binding domain CH53_RS19055 PF00551 Formyl transferase CH53_RS19055 PF01842 ACT domain CH53_RS19060 PF02810 SEC-C motif CH53_RS19065 PF01734 Patatin-like phospholipase CH53_RS19070 PF00072 Response regulator receiver domain CH53_RS19075 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CH53_RS19075 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CH53_RS19075 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CH53_RS19080 PF00816 H-NS histone family CH53_RS19090 PF00265 Thymidine kinase CH53_RS19095 PF00171 Aldehyde dehydrogenase family CH53_RS19095 PF00465 Iron-containing alcohol dehydrogenase CH53_RS19100 PF01914 MarC family integral membrane protein CH53_RS19105 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CH53_RS19110 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CH53_RS19115 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS19120 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS19120 PF12911 N-terminal TM domain of oligopeptide transport permease C CH53_RS19125 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CH53_RS19125 PF00005 ABC transporter CH53_RS19130 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CH53_RS19130 PF00005 ABC transporter CH53_RS19135 PF04269 Protein of unknown function, DUF440 CH53_RS19140 PF13396 Phospholipase_D-nuclease N-terminal CH53_RS19140 PF13091 PLD-like domain CH53_RS19160 PF03795 YCII-related domain CH53_RS19165 PF03544 Gram-negative bacterial TonB protein C-terminal CH53_RS19170 PF03061 Thioesterase superfamily CH53_RS19175 PF04279 Intracellular septation protein A CH53_RS19190 PF03692 Putative zinc- or iron-chelating domain CH53_RS19195 PF03922 OmpW family CH53_RS19200 PF04972 BON domain CH53_RS19205 PF00290 Tryptophan synthase alpha chain CH53_RS19210 PF00291 Pyridoxal-phosphate dependent enzyme CH53_RS19215 PF00218 Indole-3-glycerol phosphate synthase CH53_RS19215 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CH53_RS19220 PF02885 Glycosyl transferase family, helical bundle domain CH53_RS19220 PF00591 Glycosyl transferase family, a/b domain CH53_RS19225 PF00117 Glutamine amidotransferase class-I CH53_RS19230 PF04715 Anthranilate synthase component I, N terminal region CH53_RS19230 PF00425 chorismate binding enzyme CH53_RS19235 PF02811 PHP domain CH53_RS19240 PF01300 Telomere recombination CH53_RS19250 PF00849 RNA pseudouridylate synthase CH53_RS19250 PF01479 S4 domain CH53_RS19255 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CH53_RS19260 PF00106 short chain dehydrogenase CH53_RS19265 PF08496 Peptidase family S49 N-terminal CH53_RS19265 PF01343 Peptidase family S49 CH53_RS19270 PF10692 Protein of unknown function (DUF2498) CH53_RS19275 PF01131 DNA topoisomerase CH53_RS19275 PF01751 Toprim domain CH53_RS19275 PF08272 Topoisomerase I zinc-ribbon-like CH53_RS19275 PF01396 Topoisomerase DNA binding C4 zinc finger CH53_RS19280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH53_RS19280 PF03466 LysR substrate binding domain CH53_RS19290 PF00694 Aconitase C-terminal domain CH53_RS19290 PF00330 Aconitase family (aconitate hydratase) CH53_RS19295 PF00925 GTP cyclohydrolase II CH53_RS19300 PF01569 PAP2 superfamily CH53_RS19305 PF06305 Lipopolysaccharide assembly protein A domain CH53_RS19310 PF18073 Rubredoxin metal binding domain CH53_RS19320 PF07338 Protein of unknown function (DUF1471) CH53_RS19325 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CH53_RS19330 PF01253 Translation initiation factor SUI1 CH53_RS19335 PF05433 Glycine zipper 2TM domain CH53_RS19340 PF00596 Class II Aldolase and Adducin N-terminal domain CH53_RS19350 PF08220 DeoR-like helix-turn-helix domain CH53_RS19350 PF00455 DeoR C terminal sensor domain CH53_RS19355 PF00923 Transaldolase/Fructose-6-phosphate aldolase CH53_RS19360 PF04328 Selenoprotein, putative CH53_RS19365 PF13722 5TM C-terminal transporter carbon starvation CstA CH53_RS19365 PF02554 Carbon starvation protein CstA CH53_RS19370 PF00575 S1 RNA binding domain CH53_RS19370 PF00773 RNB domain CH53_RS19370 PF08206 Ribonuclease B OB domain CH53_RS19375 PF00384 Molybdopterin oxidoreductase CH53_RS19380 PF00730 HhH-GPD superfamily base excision DNA repair protein CH53_RS19380 PF00633 Helix-hairpin-helix motif CH53_RS19380 PF10576 Iron-sulfur binding domain of endonuclease III CH53_RS19385 PF02508 Rnf-Nqr subunit, membrane protein CH53_RS19390 PF04205 FMN-binding domain CH53_RS19395 PF03116 NQR2, RnfD, RnfE family CH53_RS19400 PF12833 Helix-turn-helix domain CH53_RS19400 PF06445 GyrI-like small molecule binding domain CH53_RS19405 PF10531 SLBB domain CH53_RS19405 PF13375 RnfC Barrel sandwich hybrid domain CH53_RS19405 PF13237 4Fe-4S dicluster domain CH53_RS19405 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CH53_RS19410 PF04060 Putative Fe-S cluster CH53_RS19415 PF02508 Rnf-Nqr subunit, membrane protein CH53_RS19420 PF10754 Protein of unknown function (DUF2569) CH53_RS19425 PF01268 Formate--tetrahydrofolate ligase CH53_RS19430 PF00005 ABC transporter CH53_RS19430 PF03412 Peptidase C39 family CH53_RS19430 PF00664 ABC transporter transmembrane region CH53_RS19440 PF03412 Peptidase C39 family CH53_RS19440 PF00005 ABC transporter CH53_RS19440 PF00664 ABC transporter transmembrane region CH53_RS19445 PF02463 RecF/RecN/SMC N terminal domain CH53_RS19450 PF02610 L-arabinose isomerase CH53_RS19450 PF11762 L-arabinose isomerase C-terminal domain CH53_RS19455 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CH53_RS19460 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CH53_RS19465 PF00005 ABC transporter CH53_RS19470 PF02653 Branched-chain amino acid transport system / permease component CH53_RS19475 PF12833 Helix-turn-helix domain CH53_RS19475 PF02311 AraC-like ligand binding domain CH53_RS19480 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CH53_RS19480 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CH53_RS19485 PF13593 SBF-like CPA transporter family (DUF4137) CH53_RS19490 PF00962 Adenosine/AMP deaminase CH53_RS19495 PF02378 Phosphotransferase system, EIIC CH53_RS19495 PF00367 phosphotransferase system, EIIB CH53_RS19495 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CH53_RS19500 PF13378 Enolase C-terminal domain-like CH53_RS19500 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CH53_RS19505 PF00392 Bacterial regulatory proteins, gntR family CH53_RS19505 PF07702 UTRA domain CH53_RS19510 PF00155 Aminotransferase class I and II CH53_RS19515 PF00367 phosphotransferase system, EIIB CH53_RS19515 PF02378 Phosphotransferase system, EIIC CH53_RS19520 PF00356 Bacterial regulatory proteins, lacI family CH53_RS19520 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CH53_RS19525 PF00132 Bacterial transferase hexapeptide (six repeats) CH53_RS19530 PF06097 Bacterial protein of unknown function (DUF945) CH53_RS19535 PF01238 Phosphomannose isomerase type I CH53_RS19540 PF10415 Fumarase C C-terminus CH53_RS19540 PF00206 Lyase CH53_RS19545 PF05472 DNA replication terminus site-binding protein (Ter protein) CH53_RS19560 PF07690 Major Facilitator Superfamily CH53_RS19565 PF03466 LysR substrate binding domain CH53_RS19565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH53_RS19570 PF00480 ROK family CH53_RS19580 PF00654 Voltage gated chloride channel CH53_RS19585 PF06649 Protein of unknown function (DUF1161) CH53_RS19590 PF06932 Protein of unknown function (DUF1283) CH53_RS19595 PF02694 Uncharacterised BCR, YnfA/UPF0060 family CH53_RS19605 PF00106 short chain dehydrogenase CH53_RS19610 PF00132 Bacterial transferase hexapeptide (six repeats) CH53_RS19620 PF02638 Glycosyl hydrolase-like 10 CH53_RS19625 PF00155 Aminotransferase class I and II CH53_RS19625 PF00392 Bacterial regulatory proteins, gntR family CH53_RS19640 PF03960 ArsC family CH53_RS19645 PF02040 Arsenical pump membrane protein CH53_RS19650 PF02374 Anion-transporting ATPase CH53_RS19655 PF06953 Arsenical resistance operon trans-acting repressor ArsD CH53_RS19660 PF01022 Bacterial regulatory protein, arsR family CH53_RS19670 PF02798 Glutathione S-transferase, N-terminal domain CH53_RS19675 PF01590 GAF domain CH53_RS19675 PF00158 Sigma-54 interaction domain CH53_RS19680 PF00301 Rubredoxin CH53_RS19680 PF00753 Metallo-beta-lactamase superfamily CH53_RS19680 PF00258 Flavodoxin CH53_RS19685 PF07992 Pyridine nucleotide-disulphide oxidoreductase CH53_RS19685 PF18113 Rubredoxin binding C-terminal domain CH53_RS19695 PF01037 Lrp/AsnC ligand binding domain CH53_RS19700 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS19705 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS19710 PF00497 Bacterial extracellular solute-binding proteins, family 3 CH53_RS19720 PF02424 ApbE family CH53_RS19725 PF05958 tRNA (Uracil-5-)-methyltransferase CH53_RS19730 PF03466 LysR substrate binding domain CH53_RS19730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH53_RS19735 PF01048 Phosphorylase superfamily CH53_RS19735 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus CH53_RS19760 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CH53_RS19760 PF00205 Thiamine pyrophosphate enzyme, central domain CH53_RS19760 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CH53_RS19765 PF01842 ACT domain CH53_RS19770 PF01042 Endoribonuclease L-PSP CH53_RS19775 PF13419 Haloacid dehalogenase-like hydrolase CH53_RS19785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH53_RS19785 PF03466 LysR substrate binding domain CH53_RS19800 PF07690 Major Facilitator Superfamily CH53_RS19805 PF00294 pfkB family carbohydrate kinase CH53_RS19810 PF00245 Alkaline phosphatase CH53_RS19820 PF03466 LysR substrate binding domain CH53_RS19820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH53_RS19825 PF06445 GyrI-like small molecule binding domain CH53_RS19840 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CH53_RS19840 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CH53_RS19845 PF13545 Crp-like helix-turn-helix domain CH53_RS19845 PF00027 Cyclic nucleotide-binding domain CH53_RS19850 PF00582 Universal stress protein family CH53_RS19855 PF02233 NAD(P) transhydrogenase beta subunit CH53_RS19860 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CH53_RS19860 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CH53_RS19860 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CH53_RS19870 PF07338 Protein of unknown function (DUF1471) CH53_RS19875 PF13520 Amino acid permease CH53_RS19885 PF00486 Transcriptional regulatory protein, C terminal CH53_RS19885 PF00072 Response regulator receiver domain CH53_RS19890 PF00672 HAMP domain CH53_RS19890 PF00512 His Kinase A (phospho-acceptor) domain CH53_RS19890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH53_RS19895 PF02074 Carboxypeptidase Taq (M32) metallopeptidase CH53_RS19905 PF00089 Trypsin CH53_RS19920 PF04408 Helicase associated domain (HA2) CH53_RS19920 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CH53_RS19920 PF11898 Domain of unknown function (DUF3418) CH53_RS19920 PF00271 Helicase conserved C-terminal domain CH53_RS19920 PF00270 DEAD/DEAH box helicase CH53_RS19925 PF02525 Flavodoxin-like fold CH53_RS19930 PF07027 Protein of unknown function (DUF1318) CH53_RS19935 PF13617 YnbE-like lipoprotein CH53_RS19940 PF11739 Dicarboxylate transport CH53_RS19945 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CH53_RS19945 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CH53_RS19950 PF03891 Domain of unknown function (DUF333) CH53_RS19955 PF02308 MgtC family CH53_RS19960 PF00893 Small Multidrug Resistance protein CH53_RS19965 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CH53_RS19965 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CH53_RS19965 PF10371 Domain of unknown function CH53_RS19965 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CH53_RS19965 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CH53_RS19970 PF01171 PP-loop family CH53_RS19975 PF01544 CorA-like Mg2+ transporter protein CH53_RS19980 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CH53_RS19985 PF00246 Zinc carboxypeptidase CH53_RS19990 PF13378 Enolase C-terminal domain-like CH53_RS19990 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CH53_RS19995 PF08534 Redoxin CH53_RS20000 PF00158 Sigma-54 interaction domain CH53_RS20000 PF18024 Helix-turn-helix domain CH53_RS20005 PF09722 Protein of unknown function (DUF2384) CH53_RS20010 PF08808 RES domain CH53_RS20015 PF05128 Domain of unknown function (DUF697) CH53_RS20020 PF04317 YcjX-like family, DUF463 CH53_RS20030 PF04024 PspC domain CH53_RS20035 PF06667 Phage shock protein B CH53_RS20040 PF04012 PspA/IM30 family CH53_RS20045 PF00158 Sigma-54 interaction domain CH53_RS20045 PF02954 Bacterial regulatory protein, Fis family CH53_RS20055 PF02917 Pertussis toxin, subunit 1 CH53_RS20060 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CH53_RS20065 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS20070 PF12911 N-terminal TM domain of oligopeptide transport permease C CH53_RS20070 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS20075 PF00005 ABC transporter CH53_RS20075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CH53_RS20080 PF00005 ABC transporter CH53_RS20095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH53_RS20095 PF03466 LysR substrate binding domain CH53_RS20100 PF00854 POT family CH53_RS20110 PF04893 Yip1 domain CH53_RS20115 PF11656 YjbD family (DUF3811) CH53_RS20120 PF02798 Glutathione S-transferase, N-terminal domain CH53_RS20120 PF00043 Glutathione S-transferase, C-terminal domain CH53_RS20125 PF08543 Phosphomethylpyrimidine kinase CH53_RS20130 PF00579 tRNA synthetases class I (W and Y) CH53_RS20130 PF01479 S4 domain CH53_RS20135 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CH53_RS20135 PF01243 Pyridoxamine 5'-phosphate oxidase CH53_RS20140 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme CH53_RS20145 PF03702 Anhydro-N-acetylmuramic acid kinase CH53_RS20150 PF05433 Glycine zipper 2TM domain CH53_RS20155 PF01047 MarR family CH53_RS20160 PF07869 Protein of unknown function (DUF1656) CH53_RS20165 PF00529 HlyD membrane-fusion protein of T1SS CH53_RS20165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CH53_RS20170 PF04632 Fusaric acid resistance protein family CH53_RS20175 PF00248 Aldo/keto reductase family CH53_RS20180 PF06945 Protein of unknown function (DUF1289) CH53_RS20185 PF00884 Sulfatase CH53_RS20185 PF08019 Phosphoethanolamine transferase EptA/EptB CH53_RS20190 PF16925 Tetracyclin repressor-like, C-terminal domain CH53_RS20190 PF00440 Bacterial regulatory proteins, tetR family CH53_RS20195 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CH53_RS20200 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CH53_RS20205 PF00929 Exonuclease CH53_RS20210 PF00462 Glutaredoxin CH53_RS20215 PF00877 NlpC/P60 family CH53_RS20220 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CH53_RS20220 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CH53_RS20225 PF00356 Bacterial regulatory proteins, lacI family CH53_RS20230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH53_RS20230 PF03466 LysR substrate binding domain CH53_RS20235 PF07690 Major Facilitator Superfamily CH53_RS20245 PF00677 Lumazine binding domain CH53_RS20250 PF01554 MatE CH53_RS20270 PF02887 Pyruvate kinase, alpha/beta domain CH53_RS20270 PF00224 Pyruvate kinase, barrel domain CH53_RS20275 PF04728 Lipoprotein leucine-zipper CH53_RS20280 PF03734 L,D-transpeptidase catalytic domain CH53_RS20280 PF01476 LysM domain CH53_RS20280 PF17969 L,D-transpeptidase C-terminal domain CH53_RS20285 PF02657 Fe-S metabolism associated domain CH53_RS20290 PF00266 Aminotransferase class-V CH53_RS20295 PF01458 Uncharacterized protein family (UPF0051) CH53_RS20300 PF00005 ABC transporter CH53_RS20305 PF01458 Uncharacterized protein family (UPF0051) CH53_RS20310 PF01521 Iron-sulphur cluster biosynthesis CH53_RS20315 PF03061 Thioesterase superfamily CH53_RS20320 PF13183 4Fe-4S dicluster domain CH53_RS20320 PF01565 FAD binding domain CH53_RS20320 PF02913 FAD linked oxidases, C-terminal domain CH53_RS20325 PF01594 AI-2E family transporter CH53_RS20330 PF00391 PEP-utilising enzyme, mobile domain CH53_RS20330 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CH53_RS20330 PF02896 PEP-utilising enzyme, TIM barrel domain CH53_RS20335 PF03618 Kinase/pyrophosphorylase CH53_RS20340 PF00793 DAHP synthetase I family CH53_RS20345 PF10636 Hemin uptake protein hemP CH53_RS20350 PF07715 TonB-dependent Receptor Plug Domain CH53_RS20350 PF00593 TonB dependent receptor CH53_RS20355 PF05171 Haemin-degrading HemS.ChuX domain CH53_RS20360 PF01497 Periplasmic binding protein CH53_RS20365 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CH53_RS20370 PF03099 Biotin/lipoate A/B protein ligase family CH53_RS20370 PF10437 Bacterial lipoate protein ligase C-terminus CH53_RS20375 PF00877 NlpC/P60 family CH53_RS20385 PF00892 EamA-like transporter family CH53_RS20390 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase CH53_RS20395 PF01522 Polysaccharide deacetylase CH53_RS20400 PF00551 Formyl transferase CH53_RS20400 PF02911 Formyl transferase, C-terminal domain CH53_RS20400 PF01370 NAD dependent epimerase/dehydratase family CH53_RS20405 PF00535 Glycosyl transferase family 2 CH53_RS20410 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CH53_RS20415 PF00005 ABC transporter CH53_RS20420 PF00255 Glutathione peroxidase CH53_RS20425 PF01032 FecCD transport family CH53_RS20435 PF00216 Bacterial DNA-binding protein CH53_RS20440 PF03484 tRNA synthetase B5 domain CH53_RS20440 PF03483 B3/4 domain CH53_RS20440 PF01588 Putative tRNA binding domain CH53_RS20440 PF03147 Ferredoxin-fold anticodon binding domain CH53_RS20440 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CH53_RS20445 PF01409 tRNA synthetases class II core domain (F) CH53_RS20445 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CH53_RS20450 PF00453 Ribosomal protein L20 CH53_RS20455 PF01632 Ribosomal protein L35 CH53_RS20460 PF00707 Translation initiation factor IF-3, C-terminal domain CH53_RS20460 PF05198 Translation initiation factor IF-3, N-terminal domain CH53_RS20465 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CH53_RS20465 PF03129 Anticodon binding domain CH53_RS20465 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CH53_RS20465 PF02824 TGS domain CH53_RS20640 PF10549 ORF11CD3 domain CH53_RS20640 PF09669 Phage regulatory protein Rha (Phage_pRha) CH53_RS20655 PF00959 Phage lysozyme CH53_RS20675 PF05866 Endodeoxyribonuclease RusA CH53_RS20680 PF07102 Protein of unknown function (DUF1364) CH53_RS20710 PF00772 DnaB-like helicase N terminal domain CH53_RS20710 PF03796 DnaB-like helicase C terminal domain CH53_RS20730 PF01381 Helix-turn-helix CH53_RS20730 PF00717 Peptidase S24-like CH53_RS20765 PF04098 Rad52/22 family double-strand break repair protein CH53_RS20770 PF00436 Single-strand binding protein family CH53_RS20825 PF05063 MT-A70 CH53_RS20830 PF06689 ClpX C4-type zinc finger CH53_RS20830 PF10431 C-terminal, D2-small domain, of ClpB protein CH53_RS20830 PF07724 AAA domain (Cdc48 subfamily) CH53_RS20850 PF13619 KTSC domain CH53_RS20855 PF04474 Protein of unknown function (DUF554) CH53_RS20860 PF09339 IclR helix-turn-helix domain CH53_RS20860 PF01614 Bacterial transcriptional regulator CH53_RS20865 PF00005 ABC transporter CH53_RS20870 PF02653 Branched-chain amino acid transport system / permease component CH53_RS20885 PF02615 Malate/L-lactate dehydrogenase CH53_RS20890 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CH53_RS20890 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CH53_RS20895 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CH53_RS20900 PF01261 Xylose isomerase-like TIM barrel CH53_RS20920 PF01914 MarC family integral membrane protein CH53_RS20925 PF01464 Transglycosylase SLT domain CH53_RS20930 PF01297 Zinc-uptake complex component A periplasmic CH53_RS20935 PF00005 ABC transporter CH53_RS20940 PF00950 ABC 3 transport family CH53_RS20945 PF00950 ABC 3 transport family CH53_RS20950 PF03881 Fructosamine kinase CH53_RS20955 PF01642 Methylmalonyl-CoA mutase CH53_RS20955 PF02310 B12 binding domain CH53_RS20965 PF00378 Enoyl-CoA hydratase/isomerase CH53_RS20970 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CH53_RS20970 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CH53_RS20975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH53_RS20975 PF03466 LysR substrate binding domain CH53_RS20980 PF14002 YniB-like protein CH53_RS20985 PF13419 Haloacid dehalogenase-like hydrolase CH53_RS20990 PF07883 Cupin domain CH53_RS20995 PF04962 KduI/IolB family CH53_RS21005 PF06917 Periplasmic pectate lyase CH53_RS21010 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS21015 PF00528 Binding-protein-dependent transport system inner membrane component CH53_RS21020 PF03459 TOBE domain CH53_RS21020 PF00005 ABC transporter CH53_RS21020 PF17912 MalK OB fold domain CH53_RS21030 PF06178 Oligogalacturonate-specific porin protein (KdgM) CH53_RS21035 PF04307 LexA-binding, inner membrane-associated putative hydrolase CH53_RS21040 PF00375 Sodium:dicarboxylate symporter family CH53_RS21045 PF01510 N-acetylmuramoyl-L-alanine amidase CH53_RS21050 PF09339 IclR helix-turn-helix domain CH53_RS21050 PF01614 Bacterial transcriptional regulator CH53_RS21055 PF14583 Oligogalacturonate lyase CH53_RS21060 PF07690 Major Facilitator Superfamily CH53_RS21065 PF01435 Peptidase family M48 CH53_RS21070 PF03572 Peptidase family S41 CH53_RS21070 PF00595 PDZ domain CH53_RS21070 PF17804 Tail specific protease N-terminal domain CH53_RS21070 PF11818 C-terminal domain of tail specific protease (DUF3340) CH53_RS21075 PF17516 ProQ C-terminal domain CH53_RS21075 PF04352 ProQ/FINO family CH53_RS21080 PF13185 GAF domain CH53_RS21085 PF04403 Paraquat-inducible protein A CH53_RS21090 PF02470 MlaD protein CH53_RS21095 PF03466 LysR substrate binding domain CH53_RS21095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH53_RS21100 PF07690 Major Facilitator Superfamily CH53_RS21105 PF00360 Phytochrome region CH53_RS21105 PF00990 Diguanylate cyclase, GGDEF domain CH53_RS21105 PF00563 EAL domain CH53_RS21105 PF01590 GAF domain CH53_RS21110 PF07351 Protein of unknown function (DUF1480) CH53_RS21135 PF02798 Glutathione S-transferase, N-terminal domain CH53_RS21135 PF14834 Glutathione S-transferase, C-terminal domain CH53_RS21155 PF00892 EamA-like transporter family CH53_RS21165 PF00849 RNA pseudouridylate synthase CH53_RS21165 PF01479 S4 domain CH53_RS21170 PF00924 Mechanosensitive ion channel CH53_RS21175 PF10753 Toxin GhoT_OrtT CH53_RS21180 PF00582 Universal stress protein family CH53_RS21205 PF12792 CSS motif domain associated with EAL CH53_RS21205 PF00563 EAL domain CH53_RS21225 PF01797 Transposase IS200 like CH53_RS21290 PF00183 Hsp90 protein CH53_RS21345 PF10709 Protein of unknown function (DUF2511) CH53_RS21350 PF05425 Copper resistance protein D CH53_RS21355 PF04234 CopC domain CH53_RS21360 PF00210 Ferritin-like domain CH53_RS21365 PF06440 DNA polymerase III, theta subunit CH53_RS21370 PF00561 alpha/beta hydrolase fold CH53_RS21375 PF00929 Exonuclease CH53_RS21380 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CH53_RS21380 PF00326 Prolyl oligopeptidase family CH53_RS21385 PF13995 YebF-like protein CH53_RS21390 PF04266 ASCH domain CH53_RS21395 PF07130 YebG protein CH53_RS21400 PF00271 Helicase conserved C-terminal domain CH53_RS21400 PF00270 DEAD/DEAH box helicase CH53_RS21400 PF03880 DbpA RNA binding domain CH53_RS21405 PF02222 ATP-grasp domain CH53_RS21410 PF03701 Uncharacterised protein family (UPF0181) CH53_RS21415 PF00425 chorismate binding enzyme CH53_RS21415 PF04715 Anthranilate synthase component I, N terminal region CH53_RS21420 PF00293 NUDIX domain CH53_RS21425 PF03315 Serine dehydratase beta chain CH53_RS21425 PF03313 Serine dehydratase alpha chain CH53_RS21430 PF03741 Integral membrane protein TerC family CH53_RS21430 PF03471 Transporter associated domain CH53_RS21435 PF03830 PTS system sorbose subfamily IIB component CH53_RS21435 PF03610 PTS system fructose IIA component CH53_RS21440 PF03609 PTS system sorbose-specific iic component CH53_RS21445 PF03613 PTS system mannose/fructose/sorbose family IID component CH53_RS21450 PF06173 Protein of unknown function (DUF986) CH53_RS21455 PF02659 Putative manganese efflux pump CH53_RS21460 PF00593 TonB dependent receptor CH53_RS21460 PF07715 TonB-dependent Receptor Plug Domain CH53_RS21465 PF00563 EAL domain CH53_RS21465 PF00990 Diguanylate cyclase, GGDEF domain CH53_RS21465 PF05231 MASE1 CH53_RS21465 PF08447 PAS fold CH53_RS21465 PF08448 PAS fold CH53_RS21465 PF13426 PAS domain CH53_RS21475 PF13847 Methyltransferase domain CH53_RS21480 PF03717 Penicillin-binding Protein dimerisation domain CH53_RS21480 PF00905 Penicillin binding protein transpeptidase domain CH53_RS21485 PF02578 Multi-copper polyphenol oxidoreductase laccase CH53_RS21490 PF00313 'Cold-shock' DNA-binding domain CH53_RS21495 PF10736 Protein of unknown function (DUF2627) CH53_RS21500 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP CH53_RS21505 PF00324 Amino acid permease CH53_RS21520 PF13974 YebO-like protein CH53_RS21525 PF13996 YobH-like protein CH53_RS21530 PF10964 Protein of unknown function (DUF2766) CH53_RS21540 PF12833 Helix-turn-helix domain CH53_RS21550 PF13520 Amino acid permease CH53_RS21560 PF00005 ABC transporter CH53_RS21560 PF00664 ABC transporter transmembrane region CH53_RS21570 PF00563 EAL domain CH53_RS21570 PF00990 Diguanylate cyclase, GGDEF domain CH53_RS21570 PF00360 Phytochrome region CH53_RS21570 PF01590 GAF domain CH53_RS21580 PF06411 HdeA/HdeB family CH53_RS21585 PF07007 Lysozyme inhibitor LprI CH53_RS21595 PF00892 EamA-like transporter family CH53_RS21605 PF01638 HxlR-like helix-turn-helix CH53_RS21610 PF05368 NmrA-like family CH53_RS21615 PF01053 Cys/Met metabolism PLP-dependent enzyme CH53_RS21620 PF00717 Peptidase S24-like CH53_RS21625 PF13438 Domain of unknown function (DUF4113) CH53_RS21625 PF00817 impB/mucB/samB family CH53_RS21625 PF11798 IMS family HHH motif CH53_RS21625 PF11799 impB/mucB/samB family C-terminal domain CH53_RS21635 PF08447 PAS fold CH53_RS21635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CH53_RS21640 PF18416 N-acetylglucosamine binding protein domain 2 CH53_RS21640 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading CH53_RS21660 PF00180 Isocitrate/isopropylmalate dehydrogenase CH53_RS21665 PF00849 RNA pseudouridylate synthase CH53_RS21670 PF00293 NUDIX domain CH53_RS21680 PF04356 Protein of unknown function (DUF489) CH53_RS21685 PF00206 Lyase CH53_RS21685 PF08328 Adenylosuccinate lyase C-terminal CH53_RS21695 PF00486 Transcriptional regulatory protein, C terminal CH53_RS21695 PF00072 Response regulator receiver domain CH53_RS21700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH53_RS21700 PF08918 PhoQ Sensor CH53_RS21705 PF08007 Cupin superfamily protein CH53_RS21710 PF07687 Peptidase dimerisation domain CH53_RS21710 PF01546 Peptidase family M20/M25/M40 CH53_RS21715 PF02146 Sir2 family CH53_RS21720 PF00480 ROK family CH53_RS21725 PF02687 FtsX-like permease family CH53_RS21725 PF12704 MacB-like periplasmic core domain CH53_RS21730 PF00005 ABC transporter CH53_RS21735 PF02687 FtsX-like permease family CH53_RS21735 PF12704 MacB-like periplasmic core domain CH53_RS21740 PF00271 Helicase conserved C-terminal domain CH53_RS21740 PF17757 UvrB interaction domain CH53_RS21740 PF03461 TRCF domain CH53_RS21740 PF00270 DEAD/DEAH box helicase CH53_RS21740 PF02559 CarD-like/TRCF domain CH53_RS21745 PF05433 Glycine zipper 2TM domain CH53_RS21750 PF07992 Pyridine nucleotide-disulphide oxidoreductase CH53_RS21755 PF05728 Uncharacterised protein family (UPF0227) CH53_RS21760 PF00933 Glycosyl hydrolase family 3 N terminal domain CH53_RS21765 PF01636 Phosphotransferase enzyme family CH53_RS21770 PF13036 Peptidoglycan-synthase activator LpoB CH53_RS21770 PF08139 Prokaryotic membrane lipoprotein lipid attachment site CH53_RS21775 PF07233 Protein of unknown function (DUF1425) CH53_RS21780 PF01230 HIT domain CH53_RS21790 PF02378 Phosphotransferase system, EIIC CH53_RS21790 PF00367 phosphotransferase system, EIIB CH53_RS21795 PF01026 TatD related DNase CH53_RS21815 PF00563 EAL domain CH53_RS21815 PF12792 CSS motif domain associated with EAL CH53_RS21860 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CH53_RS21900 PF05860 haemagglutination activity domain CH53_RS21900 PF04829 Pre-toxin domain with VENN motif CH53_RS21900 PF05594 Haemagluttinin repeat CH53_RS21900 PF13332 Hemagglutinin repeat CH53_RS21915 PF01757 Acyltransferase family CH53_RS21925 PF00196 Bacterial regulatory proteins, luxR family CH53_RS21940 PF17854 FtsK alpha domain CH53_RS21940 PF09397 Ftsk gamma domain CH53_RS21940 PF01580 FtsK/SpoIIIE family CH53_RS21940 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CH53_RS21965 PF01757 Acyltransferase family CH53_RS21970 PF02413 Caudovirales tail fibre assembly protein, lambda gpK