CH53_RS00060   10123 ..   10150 + -14.2  -2.64888   TGCTGAATAAAAAAA        CAGGGTGCAGTT TCAT ACCTGCACCCTG         CTATTTCGATGAGTT  93 31
CH53_RS00070   15235 ..   15250 + -11.8  -6.10295   ATTGCAAAGACAAAA              CCCGCC ATCA GGCGGG               TTTTTTTTATATTGG 100 64
CH53_RS00080   16857 ..   16891 +  -9.3  -5.00642   GTTAAAAGCTGATAA     CCTTCGCTGTAGGGG CTAAA TCCGTACAGCGAAGA     TTTTTATATCAGTTA  90 29
CH53_RS00085   17233 ..   17253 + -11.1  -5.36441   TGTAATGCTGTTTTT            GCCGGGGAG TCG TTCCTCGGC            TTTTTTATATAAAAG 100 46
        bssS   17768 ..   17793 + -12.7  -5.08088   GTGTTCGCCAAAAAA         GGCACC-AGTGA ATA TCACTTGGTGCC         TTTTTATTAACCGTT 100 67
        solA   19215 ..   19229 +  -5.8  -4.53349   TCCACACTTAATTAT               TAGTAT AAA ATACTA               TTTATTTAATAATTA  73 124
CH53_RS00100   20008 ..   20025 +  -4.1  -3.33657   AAGGTGCCTCCATTC             CAGTCAG TTTG CTGAATG              TATGATTTTTTTCTG  50 70
CH53_RS00140 NONE
CH53_RS00145 NONE
CH53_RS00150   31874 ..   31915 +  -3.1  -2.74488   TTTTTTTGATACACT TCGTCAGATTTATCC ACTAGGCAAATA GGATTTATCTGACGA  TACTTAGCGTAATTA  43 98
CH53_RS00155   32445 ..   32467 + -13.4  -4.99972   TGAGTGTAATACCAA           CCACTTCGCC TTT GGCGGGGTGG           TTTTTCCTGTTTTCT 100 58
CH53_RS00160   34446 ..   34465 +  -2.8  -3.48395   TCGATGATGGTTTAT            TCGCCCGAT TTT AACGG-CGA            TTCTATGGGAAGACT  48 499
CH53_RS00165   36049 ..   36064 + -11.8  -4.77567   CCCTGCTCACGCAAA              CCCGCC TGGT GGCGGG               TTTTGTTCTACAACT 100 56
CH53_RS00175   37553 ..   37576 +    -6  -4.76644   ATGGCAATAAAAAAA          CGGGCAATACA TAA TGTAC-GCCCG          TTTTTACTCAATATT  80 464
        opgC   43394 ..   43405 +  -4.4  -4.50159   AACTATCCTGTTGAT                TCCT TATC AGGA                 TTTGTTTCACTTGCA  69 162
CH53_RS00200   43702 ..   43746 + -10.7  -2.69458   TTAGTTTTACGAACC AACGCTCACCCTTGATTCCCC TCT GGGCAATTAAAGGTGAGCGAC CTATCTTTTATCCTC  76 37
        cvrA   45788 ..   45798 +    -4  -3.33798   CGTATAGCGGGAACG                 CAAT GGA ATTG                 TCTATTTATAACCAT  50 65
CH53_RS00210   47157 ..   47171 +  -7.8  -3.55563   GGTAACCTGTCATCA               CCGTGG TAT CCATGG               TTTGCGAAATACGCT  66 461
CH53_RS00220   48718 ..   48743 +  -7.6  -3.53012   TTAATTTTAATTCTA         TGCCAAGCCT TATCGC ATGCTTGGCA          TTTAAAACACCGAGC  66 47
CH53_RS00275   62269 ..   62282 +  -4.5  -4.07885   TTGCCCCTGCAATCG               CAGCC GGGG GGTTG                TTTTAACCACAGATA  62 307
CH53_RS00305   69402 ..   69412 +  -5.4  -3.45581   ATTATTTCCTGAGCA                 GCTT ACC AAGC                 ATTTATTTTATGGAA  58 72
CH53_RS00310   70692 ..   70717 + -14.1  -2.70994   GGCACTGAGCAAGTC         GGTGT-CGCCGA TGT TCGGCGCACACC         CTTATATAAAGTTAA  93 33
CH53_RS00315   71560 ..   71581 +   -13  -4.39407   TTGATGTCATCAGTG           GGCCACGC CAAAAT GCGTGGCC            TTTTCACTTATTTAA 100 52
CH53_RS00365   83712 ..   83739 +  -6.4  -2.74514   TGCTAAGTCTCGCCC        CCTACAGAAGAGA GTC TATC-TCTGTAGG        TAATTAACCCTTTCA  54 120
CH53_RS21810 NONE
CH53_RS00445  108244 ..  108256 +  -4.9  -4.06182   AATGAGTATAATCTG                TACTT TTG AAGTA                TCTTTTTATCACTAA  63 335
CH53_RS00450  109594 ..  109616 +    -5  -5.64274   AGCTCCAAAAAATAT           TTTATATAAG CAT CTTTTATAAA           TTTTTTTGTCAATCA  90 471
CH53_RS00455  110687 ..  110702 +  -3.9   -2.5805   CGTTCAAATATTCAA              GTGCC ATGATC GGCGC               GTTATCCACCCTAAT  45 99
CH53_RS00460 NONE
CH53_RS00465 NONE
CH53_RS00470 NONE
CH53_RS00475  116377 ..  116390 +  -3.9  -3.96068   TGACGAAAGTGACCA               TAATC CTCT GATTA                TTCTTATTCAGGTCA  57 224
CH53_RS21815  118298 ..  118309 +    -3  -5.75599   AGTAAGTCCAAAAGT                GTTT CATT AAAC                 TTTTTTTATAATTTG  85 367
CH53_RS00485 NONE
CH53_RS21820  119891 ..  119933 + -23.2  -3.85704   TATAAAAACCAGTAA TATCTCTGATGGCAAAGATT GTT AATTTTTGCCATCAGAGATA TTTAATCGTTAATGA 100 170
CH53_RS00500  120723 ..  120737 +  -6.4  -3.17194   ACGGTTACCCGTCGA               CGGTTT TCA AGACCG               TTGCCTTCAGCCACT  57 249
CH53_RS00510 NONE
CH53_RS00520  122983 ..  123011 +  -7.4  -2.70946   TGACTTGAAATGCCC        TACACTGCCCTC ATATA GAAGGCAGAGTA        ATGTTTCTCAGGAGG  59 38
CH53_RS00525  123362 ..  123380 + -11.7  -5.24129   TAATTACTGATAAAG             CCCGGCA TTGAT TGCCGGG             TTTTTTATCGCCAAA 100 38
CH53_RS00535  124931 ..  124949 +  -3.1  -4.16284   TCTGTTTCAGTAATC             TGTTAGC AAACC GCTGGCA             TTTATTGAAGGATAT  59 124
CH53_RS00540  125429 ..  125479 +  -6.8  -3.03124   AACGACTGAAATAAG CATTAAGCCCGGTGCTACATTATG GGT CAGACCAAACCACCGGGCTTAATG TATTGGGCGATAGCC  59 27
CH53_RS00550  128186 ..  128198 +  -7.7  -3.24879   CGCTAAACGCCAATA                TCAGC AAC GCTGA                ATTTTCAGTTTTAGA  65 13
CH53_RS00555  130384 ..  130406 +  -9.2  -3.02511   TTACCTATTGGCCCC           TTACGCTGTT TCA AACTGCGTAA           TGTTGGGCGAGTGGA  69 52
CH53_RS00565  131910 ..  131928 +  -3.8  -3.89346   AGATAATGCACTATT             TCGCCT TTTTTTC AGGCGG             TTTATCACATCACAC  57 180
CH53_RS00570  133212 ..  133226 + -12.8   -6.2845   TCCTTTTGTAAAAAA               CCCCGC ATT GCGGGG               TTTTTTTTTGTCATT 100 47
CH53_RS00580  135749 ..  135764 +    -9    -3.224   GATCGGACTTGCTCA              GCGTAC AGGT GTACGC               TATTCTGCGCACTTC  70 39
CH53_RS00585  136380 ..  136391 +  -5.8  -5.81412   GCACCATAATAATGA                TGCC CAAA GGCA                 TTTTTTTTAACTCAA 100 83
CH53_RS00590 NONE
CH53_RS00595  138399 ..  138411 +  -4.9  -3.36749   CAAGTAACACTGGTA                TTACT CAA AGTAA                TTGGTGTTGCAGCTA  54 116
CH53_RS00625  148314 ..  148338 +  -6.5  -2.87564   GCTAACAACCTTACT          GCGGTATGA AAGGGAA TTATACCGC          TCTGTCGAAAGCTGG  55 73
CH53_RS00645  154938 ..  154976 +  -3.9    -3.922   AAAGACCAAAGTAAT  GAGGGTTCGTCAGG GCATTAATACAG CCTGACG-ACCCGC   TTTACTTAGCCGTTT  57 56
CH53_RS00650  156619 ..  156643 + -13.7  -3.39328   GTCTATTTGTATAAA          TAAAAGCCAGC TCT GCTGGCTTTTG          TCATTTTTTAAAGTT  95 61
CH53_RS00655  158058 ..  158077 +   -10  -5.69262   ATAAGTTGAAAAAAA            GACAGGGC TTCG GCTCTGTC             TTTTTGTTTTTATCC 100 73
CH53_RS00660  159499 ..  159527 + -12.6  -4.56775   ACCCTTAAGTTTACT       GA-AGAACCCCAC TTTT GTGGGGTTCTGTC        TTTTTAGCAGCAAGT 100 66
CH53_RS00705  173791 ..  173802 +  -5.8  -3.28712   AGCCAAGGGAGAAGT                TGCC TGGC GGCA                 TTATCAAACAACAAG  56 222
CH53_RS00735  178812 ..  178822 +    -4  -3.53444   TGCATCTTTCTCAGT                 CATT AAT AATG                 TTTGCGGGCCACTCG  52 171
CH53_RS00790  193295 ..  193318 + -14.6  -2.74415   GCAGAAAACGACTCA          CGGCGTTGTC CTTT GGCAACGCCG           CTTAATTTAGTACTG  95 76
CH53_RS00795  194619 ..  194629 +  -2.4  -3.08032   CAACATTAATATGTG                 GCCG CTA CGTC                 TGGTTTTCGAAGAAA  42 32
CH53_RS00800  196981 ..  197008 +   -15  -3.15579   AAAATGGCATAAACT        TAAAGGCTCCAC TTTA GTGGGGCCTTTA         TTCATCCAGCGTTGG 100 55
        pflA  197872 ..  197903 + -11.6  -5.52909   ACGCATATCCCTAGA      TACCGCCAGCGTGGG TTA TCC-CACTGGCGGTA      TTTTTTTGGCTGTTA 100 121
CH53_RS00840  208949 ..  208977 + -15.4  -5.80951   CAAAGCGCTATGTGG        CGGGTGGTTTAC GATAA GTGAACCACCCG        TTTTTTATTTTCACT 100 58
CH53_RS00845 NONE
CH53_RS00850  212748 ..  212765 +  -2.7  -3.38786   TAATATGAATAAAAA             CCACT GAAGAAAA AGTGG              TATTCATTGTTATTT  46 107
CH53_RS00855 NONE
CH53_RS00860  214026 ..  214051 + -13.3  -4.49716   GTAGTCCCCCTCCGG         CGCCCTTCCCA TTTA TGGCAAGGGCG          TTTTGCGTTTTCTTT 100 85
CH53_RS00875  217595 ..  217616 +  -8.7  -5.40464   GATTACGATTCAAAA           TGCCAGCCA ACGA TGACTGGCA            TTTTTATTTCTAATA  95 137
CH53_RS00890  222096 ..  222107 +  -2.2  -4.19238   CCTTTTCAATTACTC                TGCG CGGT TGCA                 TTTTGACATTGGCAG  57 203
CH53_RS00900 NONE
CH53_RS00905  226784 ..  226795 +  -4.4  -2.52464   CAATATTTTGGCTGA                CTCA GTGA TGAG                 TACGTTGCCCGACCA  47 43
CH53_RS00910  227930 ..  227955 +  -3.2  -2.93089   CATTAATCCCATTAA         TGGCGCAATT ATTGCC AAACGCGCCA          TACTTTGACCTCATA  45 46
CH53_RS00915  229820 ..  229835 +  -6.2  -4.54047   TACCCCACCCGCAGG              CATAAG TATC CTTATG               TTTTATGTGGCATAA  77 116
CH53_RS00920  231028 ..  231040 +  -6.3  -3.78934   CAATCTCGCTATGAT                GAAGA ATA TCTTC                TTATTCTGACCGCGA  64 143
CH53_RS00925 NONE
CH53_RS00930  233722 ..  233737 +    -4  -3.12668   GCTAGCATTCTGATT              TTTGGT GGGA ACCGAA               TTCGCTATGAAGGTA  48 184
CH53_RS00935 NONE
CH53_RS00940  235555 ..  235568 +  -5.3  -2.75481   GTGCATCCCGATGAG               CTTAC ACTG GTAAG                TGATTCGGGTTAGCG  50 129
CH53_RS00945  236643 ..  236655 +  -2.7   -3.2632   CTTTTGCCAGCTATC                TGTCA CAT TGATA                TCTATTTGGGAATTT  44 15
CH53_RS00950 NONE
CH53_RS00955  238128 ..  238140 +  -3.3  -2.64322   TTTGAACGGAGCCCA                TCCTG ATG CTGGA                ATATTTACCTGAGAT  43 20
        artM  238874 ..  238894 +  -4.7  -3.05463   AGTTACCTTTCGGTT            GATAATCGT TCA GCGATAATC            TTAGCTCGACAGCCT  49 98
        gabD NONE
CH53_RS00975  242741 ..  242755 +  -2.1  -4.78107   GGCTGATGCTTTGGC               GCTTT ACCAG GAAGC               TTTTTGATCGTCATC  64 4
CH53_RS00980  243654 ..  243680 +  -4.5  -5.30348   CAACGCTGAATTAAG        GGTGCT-TTTCA TTTT TGGAGTAGCACC         TTTTTATTATTCGCT  80 76
CH53_RS00985  245280 ..  245303 +  -6.6  -2.94144   GCTGGGCCGATTGGC          GTGCGCAGGC GATA GCTTCCGCGC           TGATTTCGATACCGG  55 460
CH53_RS01030  252935 ..  252949 +   -10   -5.7946   GGCTTTATCCGAAAA               GGGTGT TTG ACACCC               TTTTTTTATTGCCAG 100 84
CH53_RS01035  255279 ..  255294 +  -7.6  -3.10164   CACCTCCCAAGCCGA              TGTCAC TCCA GTGACA               TTAAATAATGCCTCA  63 360
CH53_RS01040 NONE
CH53_RS01045  256610 ..  256624 +  -6.4  -2.80511   GATCAGCCGAGGATG               GGTTAG AAG CTAGCC               TGGTTACGTTATAAA  55 13
CH53_RS01050  257616 ..  257633 + -14.1  -4.21438   ACAAATCGACTGTCA             GCCCGGC TACT GCCGGGC              TTATTTATTGCAATA 100 74
CH53_RS01055  258504 ..  258519 + -10.4  -3.21354   TAGCAAAAATCTTAA              CCCGGT AAAT ACCGGG               TTGATAAATCTATAC  75 52
CH53_RS01060  260870 ..  260889 +  -9.2  -3.14132   TAAATTGTTTCAAAA            ACCGGAGC TTCC GCTCCGGC             TTCCTACCACGGCAA  70 94
CH53_RS01065  262350 ..  262369 + -12.2   -4.3587   CGTATTCAGCTAAAA            GGGCTACT TTTC AGTAGCCC             TTTCTCTTATTAATC  95 62
CH53_RS01075 NONE
CH53_RS01080  266557 ..  266589 + -16.5  -4.23999   TAATCCCCTGCTGGC      TTGAAGTTGCCGC GTTGGTA GCGGCAACTTCAA      TTATTTTGGCTATCG 100 38
CH53_RS01105 NONE
CH53_RS01110  272390 ..  272411 + -13.1  -3.15544   TGCTAGCCCGCAGGG           TGAGCCTCA AGGA TGAGGCTCA            TTAATCCCGATGAGC  91 228
CH53_RS01135  279820 ..  279835 + -11.8  -5.18643   AAGTATCTAACTTCA              GGGCCG TTCG CGGCCC               TTTTCTTTTCCTTGC 100 40
CH53_RS01140  280820 ..  280836 +  -6.5  -5.28176   TAAACATAAAAAAAA              CCGGC ACATAAG GCCGG              TTTTTTATGGGTGAA  87 78
CH53_RS01160  285376 ..  285413 +  -4.1  -3.90856   GTTGGCTGCCATCAC   TCACCCAAGTCATTGAG CTAT CTCAACTCCTTGGGTCA    TTTCGTTGCCGCCTT  57 81
CH53_RS01165 NONE
CH53_RS01170  289429 ..  289443 + -11.4  -3.53012   TACCAATGGGCACTC               CGGCGT TTC ACGCCG               TTTGCGGCCCGAACG  88 67
CH53_RS01180 NONE
CH53_RS01185  292410 ..  292421 +    -3  -3.28745   ACTCCTCTGAGGTAT                TTTC TATG GAAA                 TTAGCTTATTACAGG  46 31
CH53_RS01190 NONE
CH53_RS01195 NONE
CH53_RS01200 NONE
CH53_RS01205  295665 ..  295691 + -12.4  -4.84353   ATTACATATCACTTT         GGTTTGTGGC TAATTCT GCCACAAACC         TTTCTTTTCCTTTCT 100 48
CH53_RS01210 NONE
        kbaY  298003 ..  298042 +  -6.4  -4.37527   TATAAATCTTGTGTC  ATCAAAATGTTGCCCGGC TATC GTCGGGTAACATCATGAA   TTTTAATAATTATCA  74 36
CH53_RS01220 NONE
CH53_RS01230  302057 ..  302069 +  -9.1   -2.5955   TTTGCTTGCCTGAAA                CTCGC GGC GCGAG                TAACTTGTCGCAACT  67 153
CH53_RS01235  302909 ..  302932 +   -14  -3.07344   TTGGGTATAAAACAG          TTAAGGGCCA TTTC TGGCCCTTAA           TGTATTGAAAGATGG  93 248
CH53_RS01245  306118 ..  306131 +  -5.3  -2.73681   GTAAATCCCGATGAG               CTTAC TCAA GTAAG                TGATTCGGGTGCGTG  49 168
CH53_RS01260  309153 ..  309163 +    -4  -3.97368   TGCCTCGATTTTTAT                 TTGT TAC ACAA                 TTTATACATTGACAA  59 43
CH53_RS01265  309915 ..  309937 +  -9.3  -4.06491   TCAGCCTTATATTAA           GGCAAAAAA GTCTA TTTTTTGCC           TTTCTCTCACCTTAA  83 46
         spr  310903 ..  310919 + -10.1  -5.60689   AACGAAACTGTAAAA              CGCTGCC ATT GGTAGCG              TTTTTTATTGTCTAA 100 71
CH53_RS01275 NONE
CH53_RS01280 NONE
CH53_RS01285 NONE
CH53_RS01290 NONE
CH53_RS01295  319190 ..  319200 +  -6.8  -2.71011   TATAGCCGTTAAGTT                 GGCA TTG TGCC                 TGATTCAACCCCCAT  56 524
CH53_RS01320  324158 ..  324172 +  -4.2  -4.98061   TAAGCCGCATTTAGC               CTGAGA TTT TCGCAG               TTTTATTTGCTGTCT  71 38
CH53_RS01325  324624 ..  324653 + -18.1  -3.06796   TTCGGGACGCCGAAA       TAAAAAACGCCGC TTAT GCGGCGTTTTTTA        TTGGCTAGCGTCACA 100 58
CH53_RS01335 NONE
CH53_RS01340 NONE
CH53_RS01345  328098 ..  328115 +  -7.7  -6.02919   AATACCTTAAGAAAA             CCAATCC GTTA GGGTTGG              TTTTTTTGTTTGTGG 100 42
CH53_RS01460  348261 ..  348299 +  -6.1  -4.94058   CATTCACACAAAAAA   TAACCGCCAGTGATT TCCATCTTT AATCACCTGCGGTTA   TTTTATTTGCATTAA  82 114
CH53_RS01465  348675 ..  348694 +  -8.5  -2.77999   TTTGAAAACGATTTA            GCCGGGT AATCAG GCCCGGC             TCATATTAATGCGTC  66 36
CH53_RS01470  349817 ..  349832 +  -2.5  -3.74158   TACTTCAGCATCAAT              GCGGT CTGTGA ACTGC               TGTTTTACTCGCATT  50 66
CH53_RS01475  351933 ..  351964 + -14.6  -2.78384   AACAAATAGCATTTA      GTTTCAGCGGGTTG AAAG TAACTCGCTGAAAC       TCTCCTACCCCAGCA  95 62
CH53_RS01485  354924 ..  354945 +    -8   -5.0133   GCAATAACCACAAAA           CGCATCGG CCAACA TCGATGCG            TTTTTTACCACGCTA  88 51
CH53_RS01490  356356 ..  356380 +   -13  -4.90266   GTATAAAAGCAAAAA          CCCGTTATCT TATTC AGATAACGGG          TTTTTAATTGGTGCC 100 89
CH53_RS01515  361581 ..  361609 +    -3  -2.98873   ACCCGTCAGTTATAT        CCGGTATCCAGA CCACA TCTGGCAACAGG        CTCTTTTTCATGGCT  43 102
CH53_RS01520  362591 ..  362605 +  -5.7  -2.72344   AATATTTTATATTAG               CCCAT CAAAT ATGGG               TAATTAGCAGTAAAC  51 137
CH53_RS01525 NONE
CH53_RS01530 NONE
CH53_RS01535 NONE
CH53_RS01540 NONE
CH53_RS01545 NONE
CH53_RS01550  369297 ..  369311 +  -2.1  -3.13403   TTTTATCAGCCGTAT               CAGTT CCATT AGCTG               TATTAATAGAAAAAC  43 43
CH53_RS01555  370828 ..  370852 + -15.1  -3.84451   CTGAAAAAGCATACA          GCCCAAGCTTG CAA TAAGCTTGGGC          TTTAGATTTGGCGAA 100 62
CH53_RS01580  377642 ..  377655 +  -2.3  -2.63348   ATTGCCAGCAGGATC               TCCCA AGAA TGGGC                ATTGATCTTAGTACC  39 240
CH53_RS01590  379169 ..  379179 +  -2.6  -3.93984   AATTCGTAAGAGTAA                 TTAT TAA ATAA                 TTTATCGGTACATTT  53 378
CH53_RS01610  382446 ..  382460 +  -2.8  -3.64933   CCCGATTGCTTTCGC               TGTTTC CCT GATACA               CTTTTTTAACATTCG  50 226
CH53_RS01615  383901 ..  383915 +  -7.2  -3.72893   CACGAATAATAAATG               TGTTCA GCA TGAACA               TTTGCTGGGACACTG  67 355
CH53_RS01640  390041 ..  390065 + -15.1  -3.84451   ACCACAAACAAAAAA          GCCCAAGCTTG CAA TAAGCTTGGGC          TTTAAATTTGGCGGA 100 96
CH53_RS01655  393766 ..  393780 +  -2.9     -2.89   GGAATATGCATTATC               GTTAT GCAAA ATAAC               TCGTTATCTACCAGT  42 45
CH53_RS01660 NONE
CH53_RS01665  397144 ..  397184 + -19.1  -4.16301   CAGAGATACTCTCAA  GCCCGGTGTTACTCAGCAG CCT TTGCTCAGCAACACCGGGC  TTATTTCTATCCATT 100 51
CH53_RS01680  404580 ..  404618 +  -6.1  -3.06138   ATACTGAACAATACA   CTACAGCCTCAATGATT TTCGT AATCATAGAGAGTGTAG   ATTTGTGCTGTTTGT  56 432
CH53_RS01685  406963 ..  407004 + -10.3  -3.89756   TCTGATTTTTAGTTC TGGCCCTGCGCGGTAATCG CAAATA CGGTTATCGC-C-GGGCCA TTCTTCATTTGCCCT  84 36
CH53_RS01690 NONE
CH53_RS01695  408570 ..  408592 +  -5.6  -3.21912   AGCATAAATGCTGTT           CAAATCGGTT CCC GACCAATTTG           TTGCTCAGTTGCCGC  54 159
CH53_RS01700  409277 ..  409294 +  -7.7  -2.97425   CCCACATTAAAAATA             CCCATTC AACT GAGTGGG              TATCTAAATTATGTC  63 64
CH53_RS01730  419998 ..  420025 +   -15  -5.14563   CCTCCCCAACTAAAA        GGGCGCATATCCT GTC AGGA-ATGCGCCC        TTTTTTAATCAAACA 100 44
CH53_RS01740  422704 ..  422729 +  -5.5  -3.83378   ATGTGCTTTTTAAGA         TCAAGACCC TAAAGACT GGGTTTTGA          TTCTCTCTTTTGACG  61 214
CH53_RS01810  438095 ..  438105 +  -3.2  -3.53444   CTTGAAACTGTTGGG                 GGTT AGC GACC                 TTCGTTATTCGCCCC  50 47
        idnK NONE
CH53_RS01820  439453 ..  439470 +  -9.1  -3.78329   CGCGTGATGCCTAAA             TCCGCCG TCCA TGGCGGA              TTTCCCTTGCTACAC  76 277
CH53_RS01905  460572 ..  460594 + -14.2  -4.99645   CCACCAGTAATTAAT           CAGGGCTTGT ATA GCAAGCCCTG           TTTTATTTATGCAGT 100 31
CH53_RS01915  461967 ..  461988 + -13.1  -3.15544   TGCTAGCCCGCAGGG           TGAGCCTCA TGAA TGAGGCTCA            TTAATCCCGATGAGC  91 188
CH53_RS01940  467642 ..  467655 +  -6.7  -2.73681   ACGCATCCCGATAAG               CTGAC TCAG GTCAG                TGATTCGGGTAAGTG  56 87
CH53_RS01945  470033 ..  470051 + -11.7  -5.47159   ACGTTGTCTACGAAA             CGCCAGC CTTGT GCTGGCG             TTTTTGTTTGTTGGC 100 51
        cmtB NONE
CH53_RS01960 NONE
CH53_RS01965  474024 ..  474039 + -10.4  -5.37345   GTAAGAAACACGAAA              GCCCCT GAAG AGGGGC               TTTTTTATGCTTAAG 100 55
CH53_RS01985  477689 ..  477725 +  -8.8  -3.35849   CTCGGCTTAATCGAA    TTGCTGCGGGATAG ATAAAATCG CTATCCCGCAGAGA    TGTTACTTTAGTGCG  70 31
CH53_RS02065  494051 ..  494067 +  -7.9  -4.11394   TAATAGTAGGCTGGC              CACCGCC AAA GGCAGTG              TTTTCAAACTGAGAT  73 251
CH53_RS02075  496554 ..  496596 +  -9.3  -3.13743   AAATCAATCAAAAAA C-GCACGACCAACAGTCAGAC TGA GTCAAACTGTTGGT-GTGCAG TTCCCTGTGAACTTT  70 40
CH53_RS02100  501768 ..  501785 +    -7  -3.29461   GGAATTTTAACCAGA             TGGCAG GTTCTG CTGCCA              TTCTCAGCGCAATTA  62 146
CH53_RS02115  505469 ..  505485 +  -2.1  -3.68619   CGTCACATTGATATT              CCCTTCC ACA GGCATGG              TTTCGATGCATTGCC  50 323
        mnmC  510338 ..  510358 + -10.4   -2.9045   AGACCAAAACCTGAT            CCGGTGGG GAAAG CTCACCGG            CTTTGATCGCTTTTT  71 183
CH53_RS02165  516115 ..  516140 + -10.3  -3.19522   TTTGAGAGAAAAACA         ACGGCGCGACA GAGA TGCCGCGCCGA          TTGGGTATTCACTAA  75 54
CH53_RS02190  522988 ..  523001 +  -9.5  -5.70522   CTGGCAAACAAAAAA               GCGCC TTTC GGCGC                TTTTTTATTATTCTT 100 51
CH53_RS02245  531848 ..  531860 +  -6.3  -4.11869   ATGCGAACATCAATA                TAGCA GTC TGCTA                TTTATCACTTTTTTA  69 265
CH53_RS02250  532463 ..  532483 +  -8.3  -3.78436   ATAGCTACAACTGTG            CCGATAAAC ATC GTTTTTCGG            TTATTACTATCACTT  73 240
CH53_RS02255 NONE
CH53_RS02260  534066 ..  534092 +   -14  -2.87028   TATGGTTCAATAACA         TTATGATCAAGA TAC TCTTGATCATAA         TCAATTTTATTATCA  91 52
CH53_RS02300 NONE
CH53_RS02305  541081 ..  541102 +  -5.9  -3.84246   ATGCGATAATCATCG           TCAATCTCGC CTT GCGGG-TTGA           TTTCATCCTTGGCAC  64 373
CH53_RS02320  545214 ..  545235 +  -7.1  -3.12327   CTCAACCATCAATAA           AGCGCCCTG TTCA CTGGGCGCG            TATTGGGTATAGCAA  63 26
CH53_RS02380 NONE
CH53_RS02385  560648 ..  560675 + -12.8  -2.54371   ATCAAGCCTAGTAAA        T-TCCCCCGCGTC GGT GATGCGGGGGACA        CATTTGTTTGGCGCA  83 30
CH53_RS02390  562204 ..  562227 + -10.3   -4.3534   TAATAGAAATAGAAA          GGGCCGCAT CGTAAC ATGTGGCCC           TTTTACTGCTTGCCA  90 55
CH53_RS02400  564725 ..  564751 +  -9.5  -2.71712   TAGAATACATTTTTA        GCCCGTCAC-AT CGCT ATGGTGGCGGGC         ATTTAACAAGCCGAG  70 58
CH53_RS02405 NONE
CH53_RS02410  567530 ..  567544 +  -6.4  -3.31461   TCAGTGCGATAACCA               CTGCAT CCA GTGCAG               TTATCAGGATCAATA  59 143
CH53_RS02440 NONE
CH53_RS02445 NONE
CH53_RS02450  578469 ..  578499 + -12.7  -3.06492   CCTACTCACAACTCA       CTGATTAGCCGTG ATACC TGCGGCTAATCAG       TATTGAGATAGCTGG  84 63
CH53_RS02455  579128 ..  579138 +  -2.4  -3.42395   GGGCCTATTTCCTCA                 GCCC CGT GAGC                 TATTTCGGTGATAAA  45 4
CH53_RS02460  579747 ..  579764 +  -4.1  -3.28712   TGATGTCAGTACAAT             GCCACTA CCTT TAGTAGC              TTGTACCCCACAGGA  50 81
CH53_RS02465  580234 ..  580244 +  -6.8  -3.23274   ATTGTCTTAACGTCG                 GCCA GAT TGGC                 TTAGATTGTAACCAA  60 40
CH53_RS02485  585017 ..  585041 + -15.8  -3.17075   CTCCTCAACGTTATC          TCTGCTGGCG CGGCC CGCCAGCAGA          TTCCCTTGCACCCCG 100 91
CH53_RS02490  586872 ..  586883 +  -2.2  -3.55444   ATGCTGAACCCCGTA                TTCC AGCC GGAG                 TTTAACCCGTGAAAG  47 9
CH53_RS02495  587649 ..  587669 +  -5.4  -3.74792   TGCATTTCATTCCGC            GTGGAATG CAGCT CATTCCCC            TTTCGATCTATAGTG  60 42
CH53_RS02500  589188 ..  589205 + -11.3  -4.00532   CAATGATGTAAAAAA             GCAGAGC CTTG GCTCTGC              TTTCATATTTCACCG  90 113
CH53_RS02515 NONE
CH53_RS02520 NONE
CH53_RS02525  593513 ..  593529 +  -5.1  -2.71011   GTAAAGGGCATGAGC              GCCATCA TGA TGATGAC              TAATTAGCAAAAGCT  49 6
CH53_RS02535  596421 ..  596434 +  -9.5  -5.64274   AAAAATCCTTAAAGA               GGCGC TACG GCGCC                TTTTTTTATGCCTAC 100 50
        gltX  599530 ..  599548 +  -9.5  -5.31855   TTGCGCGTTCAATCA             GGCGGCT ATTCA GGCCGCC             TTTTTATTATTACTC 100 49
CH53_RS02570 NONE
CH53_RS02575  599962 ..  599976 + -12.8  -5.75822   CCACTCTTTAAGAAA               CCGGCC TAT GGCCGG               TTTTTTTGCTTTCTC 100 38
CH53_RS02580  600707 ..  600722 +  -6.2  -3.31537   ATTGTGTAAAGCAGC              CCTTTA ACGT TAAAGG               TTAATATCCTCTCGT  60 86
CH53_RS02585  601144 ..  601172 + -10.2   -3.6692   GGTTAAACACTGATG        GGGCGATGGCAG CATAA CGACCATCGCCC        TGTTTTAGACTGCAA  80 55
CH53_RS02605  605594 ..  605610 +  -2.3  -2.78327   ACTTACTTCCATAGC              CATAC TGTTAGC GTATG              CTTTGAACGTTTCCT  41 135
CH53_RS02610  606651 ..  606666 + -10.4    -5.626   CTAAATGCTAAAAAA              GCACCC CCGT GGGTGC               TTTTTTTGTGGCCTA 100 54
CH53_RS02615 NONE
CH53_RS02620  609190 ..  609205 +  -3.3  -2.74488   GAGAGTCCCGATGAG              CTTAC TGTGTT GTAAG               TGATTCGGGTGATTG  43 110
CH53_RS02625  609811 ..  609828 + -10.5  -5.56263   TACGAATAAAATAAA             CGGCGCC TAAG GGTGCCG              TTTTTGTTTTCTGCT 100 46
CH53_RS02640 NONE
CH53_RS02645  615639 ..  615651 +  -6.3   -2.9356   CCTTTACACATCTAA                TTACC TGC GGTAA                TGTGTGGATATACAT  56 326
CH53_RS02650 NONE
CH53_RS02655 NONE
CH53_RS02660  619584 ..  619616 + -12.1   -2.5955   GGTTAACTGAGAGTG      GTACGTGAGTGTGTT AAT AATGCCCTCACGTAC      TCAGTTGTCAAAAAT  81 31
CH53_RS02725  636186 ..  636224 +  -5.9  -3.89291   AGTAATTAATCTTTA   CCCTATCCTCTGCTGCT TTATC AGCTTTTGGGGATAGGG   TTATTGTCATATTAA  63 36
CH53_RS02735 NONE
CH53_RS02740  638646 ..  638662 +  -7.2   -2.7464   GAATACTTTCCACCA              GCGCGG CATCA CCGTGC              ATTTCACCGTCAATT  56 372
CH53_RS02750  641043 ..  641057 +  -2.8  -3.72893   GTATTGCAATAGCAT               GATCGT CTT ACCATC               TTTAATGCGGCCATC  51 60
CH53_RS02795  648439 ..  648453 +  -2.1  -3.62577   ACAGAGGCGGATTAA               CTCAG CTTTA TTGAG               GTTTTTTACAGCTTC  49 501
CH53_RS02805  651933 ..  651956 + -11.8  -3.85817   GACGGGCATAAAAAA          GGCAGAG-CCA ACA TGGTCTCTGCC          TTTCTGACGAGCGAT  91 275
CH53_RS02810  652931 ..  652960 +  -9.9  -3.69354   AAATTGCCCCCTTGC       TCCGGGCAGCCGT CTAC GCGGCTGGCCTGA        TTTGCCATTCTAGCC  79 124
CH53_RS02815 NONE
CH53_RS02820 NONE
CH53_RS02825 NONE
CH53_RS02830  655862 ..  655890 + -10.4  -3.66784   GCGAAAAACCGACCA       GAGTGGTCTGTGG TGCC CCA-AGGCCACTC        TTCTGTTGCCAATGA  79 396
        gcvR NONE
         bcp  665082 ..  665097 + -10.4  -5.52023   AAAGTTGCAAAAAAA              GAGCGC TCAA GCGCTC               TTTTTTATTCGTCAT 100 65
CH53_RS02890 NONE
CH53_RS02895 NONE
CH53_RS02915 NONE
        purN  673616 ..  673640 +  -6.4  -5.27477   TAAATATTGATTAAA         GGCGC-GGCCA GTTA TGGTTAGCGCC          TTTTTTAATTCCCCT  87 51
CH53_RS02925  674724 ..  674747 +  -2.3   -4.1648   TGTTTGGTAAAAAAG          GGCAAGGCA TATTGT TGCCATGCA           TTGTTTAGTTGTTGT  57 480
CH53_RS02950 NONE
CH53_RS02955  684428 ..  684442 +  -7.2  -3.56568   GATTCGGGTGACAAA               TCTGTT GGG AACAGA               TTTGAACGCTGCTTG  66 76
CH53_RS02960 NONE
CH53_RS02965  686384 ..  686404 +  -2.5  -2.92896   CTAAACTTTTGAACA            TGCCGTC TTGTCGC GGTGGCA            TACTCTTTATGTGAT  43 110
CH53_RS02970  689891 ..  689920 +  -9.3  -3.77721   CACTATCGGGTAAAG       TCGCCCCCC TTTATTTGGCCT GGGGGGCGA        TTATGTTCATTGGTT  76 108
CH53_RS02975 NONE
CH53_RS02980 NONE
CH53_RS02985  696001 ..  696014 +  -3.1  -3.12895   TGGGCAGGAGCAACC               GTGAA ATTC TTCGC                TCTGTTCATCCAGCG  46 22
CH53_RS02990  699073 ..  699085 +  -3.3  -2.78384   CTAATGAGGCTGGAG                TAGCC TAT GGCGA                TATACTCAGGCGGCA  44 23
CH53_RS02995 NONE
CH53_RS03000  701206 ..  701219 +  -2.3  -2.93929   GGGATATCGCTGGGA               AGCAG AGAT CTGCC                GTTTACTGTAATTTC  42 1
CH53_RS03005  701771 ..  701791 +  -6.8  -5.02287   AGATGATGGGAATAC            GCGCGG GGCAGTTGA CCGCGC            TTTTCTCTTTTTATA  85 121
CH53_RS03010  703475 ..  703502 + -13.5  -5.43553   AGGAACCACCTCCTT        GGCTAGCCCAA TCTCCC TTGGGCTGGCC         TTTTCTTTTTTACGT 100 180
CH53_RS03015  705217 ..  705244 + -12.2  -2.72977   TTTAACTTTAATTTT        CACTTTGAAAGG TTTA TCTTTCAAAGTG         TGATCTATATGCAAT  81 192
        srlA NONE
        srlE NONE
CH53_RS03030  707572 ..  707585 +  -6.7  -2.71263   ACAAATCCCGATGAG               CTGAC ACTC GTCAG                TGATTCGGGAGCATT  56 154
CH53_RS03035 NONE
CH53_RS03040  708946 ..  708960 +  -3.6  -4.33997   ACCGAAATCATGATA               TTTTCA CAA TGAAAG               TTATTCTTTTTCATG  62 28
        srlR NONE
CH53_RS03050  711049 ..  711066 +  -6.3  -2.66711   GATAAGTCGCGAACT             CACTTGG CTTA TCAAGTG              CTTGTGGCTTGTCGG  53 318
CH53_RS03060  712664 ..  712677 +  -6.7  -2.71364   ACACATCCCGATGAG               CTGAC TCAA GTCAG                TGATTCGGGGGGTGA  56 109
CH53_RS03070 NONE
CH53_RS03075  715151 ..  715172 + -13.1  -4.28018   AAATTTATTAATTTA           TAAGGGAGC CTTA GCTCCCTTA            TTTTAATACACTATT 100 30
        xseA  722484 ..  722498 +  -5.6  -2.73364   GCGCAATCAGGGCAC               TCCGCC TGT GGCTGA               TAGTTGCCATGGCAG  48 178
CH53_RS03170  747986 ..  748005 + -10.7  -3.88498   TGGTGTGTCAAAAAA            GGGAGCC AGTTAC GGCTCCC             TTTCCTATATCGACC  86 75
CH53_RS03230  758496 ..  758519 + -10.3  -5.37865   CAGCCATATAAAAAA          GCCAGTCGG CTAATC CTGACTGGC           TTTTTTCATTGTTAA 100 181
CH53_RS03245  761690 ..  761708 +  -2.4  -2.70932   ACGCAGTGTGTTGGA            G-CTGCC TTAACT GGCAGAC             TGATTGGGCACAACC  40 16
CH53_RS03260  766003 ..  766024 + -11.6  -2.68071   TATTGAGTTTCTCAT           GGAGAGGC CGCCGC GCCTCTCC            TGCATTTCCGTTCAA  79 42
CH53_RS03265  767127 ..  767143 +  -5.1  -3.27602   GGGCAGTACAGAAGG              GCGAG ATAGAGC CTCGC              TATTAATATTACTTA  54 3
CH53_RS03270  767599 ..  767611 +  -6.3  -2.63479   CGCTTAGCGGGATGC                GTTGT TGA ACAAC                TAATATCAGAGTCTT  54 46
CH53_RS03275  768973 ..  768986 +  -5.3  -3.16881   ATATAGTAGTGTCAT               TATCG TAAG CGATA                TTAATGAAATCAATC  53 148
CH53_RS03280 NONE
CH53_RS03285  770332 ..  770344 +  -2.7   -2.9953   AAGGGGAGACCACCG                TGGAT TAT ATTCA                TATAGTTGTGGTTGC  43 39
CH53_RS03290  771632 ..  771690 + -9.79999  -2.74144   TCCAGCATAAATCCT T-G--GTACTTGACGTTGCAGGGGGGTCG CTTG CGGCCTACCTGCAACGCCAAGTACGTCGA ATTTAGGGGTAAAAA  70 31
CH53_RS03320  779599 ..  779618 + -13.6  -3.22475   AGCATGCGTAAAAAA            GGGGCATC AACT GATGCCCC             TATTATCACAATCAA  93 71
CH53_RS03330  785373 ..  785404 +  -4.4  -4.30576   CGAGTCATGGCTGAC      GG-GTAGAGGCTTGC TGC GCGAGTTTCAACGCC      TTTTGCTGCTCACGC  63 88
CH53_RS03340  787206 ..  787219 +  -5.9  -3.26649   CGCAAAAATACAATA               GCGGG TTAT CCTGC                TTACTGTCCGAGTAT  55 132
CH53_RS03355 NONE
CH53_RS03360  790285 ..  790307 +  -4.1  -2.94695   TGCGCATAGCAAAAA          GGGCG-GCAT TCTC ATGCACACCC           TCGTTCTCTCTTGCC  47 76
CH53_RS03400  798757 ..  798801 +  -5.8  -3.41936   GCTGCCTTCGCTAAT GCCAACTT-CAACCTTTTG-GC CTG GCTCAAGCGGTTGCGAGATGGC TATTTGCAATTGGTG  57 295
CH53_RS03425  803004 ..  803030 + -13.7  -2.87936   CCCATAGTAGCGTTT         CAGGGCGCGTT TCAAT ATCGCGCCCTG         CTTATCTTGATTTAT  91 34
CH53_RS03435  805295 ..  805312 +  -8.4  -5.55769   CATCCTTGCGAAAAA             GCCGCT TATAAC AGCGGC              TTTTTTATTATCAGC 100 46
CH53_RS03455  808776 ..  808791 + -10.4  -4.62069   AGTTAAATAAAAAAA              GGCACC CGAA GGTGCC               TTTTTCACGTCAAAA  91 52
        ppnK  810438 ..  810453 +  -6.2   -2.5459   TAAAACCAGTTTATA              CTGTAT TCAA ATACAG               CTATGTGTTTATGTA  54 68
CH53_RS03470  812143 ..  812161 +  -2.5   -2.7263   ATTGCTCGCAGCGTA             GAAAAGA TTAAC TTTTTTC             CTTTCCAGAGGTCAT  41 25
CH53_RS03475  812735 ..  812755 +  -9.8  -5.52909   GGGCTACAATAAAAA            TAAGGCAC AGACA GTGCCTTA            TTTTTTTGCCTGTTC 100 162
        smpB  814270 ..  814283 +  -8.1  -3.15544   TCGCAATACGAATCT               GCTGC TTTA GCAGC                TTAATCAGCCTAAGA  65 188
CH53_RS03530  820924 ..  820944 +  -9.8  -4.99638   TTGAAAAAAGGCTGA            CTGTTCAC AACAA GTGAACAG            TTTTTCTATAAATCT  93 26
CH53_RS03570  828416 ..  828434 + -14.6  -3.54771   TTTGCCCATAAAAAA             GCCGGAGA ACA TCTCCGGC             TTATCGTGTTATCAC 100 45
CH53_RS03580 NONE
        ccrB  830654 ..  830672 + -13.2  -5.01497   CGGCTAAAAATAAAA             CACCCTCA GTG TGAGGGTG             TTTTTATCTACTACT 100 52
CH53_RS03595  832694 ..  832727 + -10.5  -4.07746   AGTGCTAATAAGTAA     GACACTCATTAATTA ACAA TGTTTAATGAGTGTC      TTCTATTTTTCAAAG  86 50
        ftrA  850814 ..  850829 +    -6   -4.8143   TTAGAAAACAAAAAA              CCCCGC CGTG GCGAGG               TTTTTAGGTTGTTGG  80 79
CH53_RS03695 NONE
CH53_RS03700  852675 ..  852688 +  -3.1  -3.09004   GCGGTGAAATTTATT               GCGCCA AGG TGG-GC               TAGTTTTACGGGTAC  45 56
CH53_RS03715  855671 ..  855686 +  -7.5   -2.9186   CTATAAAAAAAGACA              CCCGG CATTAA CCGGG               TGTCTGGAATTGGCT  60 200
CH53_RS03725  857029 ..  857042 +  -3.7   -3.1637   TTGCCGATAGCATCT               CACGG TGCC CCGAG                TTGGTGGCCCTATCT  46 311
CH53_RS03735 NONE
        nrdI NONE
CH53_RS03745 NONE
CH53_RS03750  861111 ..  861133 +  -7.6  -4.80453   GGGATCCACACCCAC           TGGCAGTCAC AGC GAGGCTGCCG           TTTATTTTGTGATGA  83 89
CH53_RS03755 NONE
CH53_RS03760  864080 ..  864101 +  -5.9  -3.29043   AGTAATTTCAAATTA           TTACGCTCA AATT TAAGCGTAA            TTGTCACAGGCAGTT  56 36
        proX  865333 ..  865359 +  -4.3  -3.94404   CCACCTTGCCGGTTT        G-AACCGCGCCA TCCG TGGCGCGGACGC         TTTACTTACCTGCTT  59 149
CH53_RS03800  874152 ..  874176 +  -7.8  -4.06419   ACCCCAATGCATGTA          GATGGGTGCT GATAA AGCGCCCACC          TTCTTTATGCCAGGG  73 218
CH53_RS03810  875659 ..  875681 +  -3.4   -4.6008   TTTTCTGAATTACGC           GCCCAGAA AGACCGC TTCTGAGC           TTTTAGTTGTGTTTT  64 5
        mltD  877174 ..  877189 + -10.4  -5.64274   TAAAGCTGTTAAAAA              GCACCC TTCG GGGTGC               TTTTTTTATGGCTGG 100 56
CH53_RS03830  880536 ..  880567 + -11.7  -2.78547   ACCGCGATCCAGCGA      CGCTTGAGTGC CATATCGTCA GCACTCAAGCG       TAATTCCTGCGCTAA  76 148
CH53_RS03920  895088 ..  895124 +  -8.2   -3.1085   TTATCTAAAATCCAT   GCTCACCATTCAAGC-TG GAT CATGC-TAAATGGTGAGC   TATTACCTGAATTAC  65 60
CH53_RS03925  896485 ..  896505 + -14.1  -4.14739   TTATAATGCAAAAAA            CCCTGAATC AGA GATTCAGGG            TTTTGCAATAAGTGG 100 285
CH53_RS03970  907854 ..  907871 + -12.7   -4.3208   CGATAAAATAACAAA             CGGCAGC TTAG GCTGCCG              TTTTCAATTCTGCCC 100 53
CH53_RS03975  908586 ..  908601 + -11.8   -5.4505   TCATTTCGGATCTAA              CGCGCC TTTG GGCGCG               TTTTTTATTGACAGC 100 56
        pheA  910153 ..  910168 + -10.4  -3.30124   GCTTAGGATTTACAA              GGCCCA AGGA TGGGCC               TTGTAACAAGTGCAG  77 63
CH53_RS03995  913393 ..  913403 +  -6.8  -3.92869   AGAGGATCCCACGAC                 GGGT TAT ACCC                 TTTCTCAATGCATGC  69 64
CH53_RS04000  915199 ..  915225 + -15.2  -4.26881   TAGATGATATGCAAA         GAGGCCAGCTCA CAA TGAACTGGCCTC         TTTAATTTTGTGGCA 100 53
CH53_RS04005  916355 ..  916377 + -13.4   -3.2218   TTGAAATAAAAAAAA           GGGGTCAGCC AAT GGCTAACCCC           TTCATAACTATTAAC  91 149
CH53_RS04035 NONE
CH53_RS04040  922498 ..  922514 +  -5.1  -5.15969   AGTTAACATAAAAAA              GACGC CTTATCA GCGTC              TTTTTTGCGTTCGCC  79 60
CH53_RS04110  934540 ..  934554 +  -4.2  -3.53012   AGCTTTGAATAAAAA               TACCAG CAT CAGGTA               TTTAGCGGGGCGGAA  52 118
CH53_RS04115  935553 ..  935576 + -10.3  -3.75437   GCCGCCATGATGACT          TGCCGTACC CTCCCT GGTGCGGCA           TTTGATAACGTCATT  80 62
CH53_RS04160  945997 ..  946017 +  -3.9  -3.57462   CACTTCCACTTGCTG            CTGCGCCAT CCA ATCACGCAG            TTTGAGCGTCGAGTC  52 314
CH53_RS04195  954401 ..  954415 +  -4.2  -2.52635   TTTTCGCCAAGTACA               AAACGG TTC CCGTTA               ATTAATAATACGGGT  44 6
        fucI  956283 ..  956293 +  -3.2  -3.33492   TGAGCAGGCTCGTAA                 GTGT GGA GCAC                 TTCTCACCTAAGTCA  48 50
CH53_RS04205  957932 ..  957946 +  -2.8  -2.71483   CCCATATCCCATTAT               TGAAGG AGC CATTCA               TGCTTAAAACCATCT  41 4
CH53_RS04210  958366 ..  958376 +  -2.4  -4.13561   ATTCTGTTAAAGAAA                 GGGG TGA CGCC                 TGTTTTTTAAACCCG  53 5
CH53_RS04215  959511 ..  959529 +  -3.8  -3.95424   TGATGGGCAAAGGTT             TCGACAAT GAC ATTGCCGG             TTTCATATTCATAGT  57 314
CH53_RS04225 NONE
CH53_RS04230  962612 ..  962630 +   -16  -2.97408   AAGCTAAAAAAACAT             CGCTGGGC ACT GCCCAGCG             CTTATTTCGGTCCGC 100 50
CH53_RS04235 NONE
CH53_RS04240  965165 ..  965179 +  -2.8   -2.6933   AGAAACTGATGTTGG               CTTTGT CTG ACAGGG               GCTTTTTATGAAAAA  41 16
CH53_RS04245 NONE
CH53_RS04250 NONE
CH53_RS04255  968924 ..  968951 +  -5.6  -3.12327   TTACTAACGCTTGTT        TCTGTTATCGAA CGCT TTCGCTAACTGA         TGTTGAATGTGAGAA  54 335
CH53_RS04260  970623 ..  970652 + -16.5  -4.16842   CGGTTAACAGTAAAA       TCCAACCTCGGTG GTTT CACCGGGGTTGGG        TTTATTACACATAAA 100 34
CH53_RS04265  972512 ..  972528 +    -5  -3.20633   ATTTTGTAGGGAAGT              GACCGC CTCGT GCGGGC              TTCCCTGTGTTATCC  53 187
CH53_RS04270 NONE
CH53_RS04275 NONE
CH53_RS04280 NONE
CH53_RS04285  975951 ..  975963 +  -2.6  -3.86346   ATGATCTTTTAATGC                GCCG TCATC TGGC                TTTGTAACCGGATGC  53 6
CH53_RS04290  977161 ..  977187 +  -8.7  -3.07816   CCCAAGTGACATCGA         GGTGCAGGCAG CCAGC CTCCCTGCATC         TTGCATGGGTAACGG  67 74
CH53_RS04295 NONE
CH53_RS04300 NONE
CH53_RS04305  980834 ..  980863 + -10.7  -2.62263   AGTCCCTTTCCCTGA       CTAACCCCGGTTA AGTA TTGCCGGGGTTGG        TGCTATAACCGCGCT  76 39
CH53_RS04310  982287 ..  982301 +  -2.1  -3.84719   GAACGGCAGGAATAT               CCGAT GGGTG ATTGG               TTTACATTTAAACAT  51 164
CH53_RS04315 NONE
CH53_RS04320  983284 ..  983295 +    -3  -2.79803   CAAATAAGAACGCAG                GTTT TATT AAAC                 ATTTAAATCCGCTTA  42 60
CH53_RS04325 NONE
CH53_RS04330  985076 ..  985091 +  -3.4  -2.74488   ATTCGATTTGCTGTT              TTTTTA TCTT TAAAAA               TGATTGAGGTGGTTC  43 63
CH53_RS04335  986768 ..  986781 +  -8.1  -2.71924   CCTATAGATAAGTGA               CAGGC CAGC GCCTG                ATTTAGCCACCGCTA  61 433
        fusA  989193 ..  989222 + -12.1  -2.95652   GCAGTAACATACTCA       GCCGCCAGTGGGA AATT TTACGCTGGCGGC        CTTTAATTGGCTAGA  82 51
CH53_RS04365  995235 ..  995260 +  -3.2  -3.37188   CCCTCGCAGAAGCGC         CTGACGCGAT TACGAC ATCTCGGCAG          CTTTTTGCGCTAAAT  48 53
CH53_RS04500 NONE
CH53_RS04505 1025062 .. 1025079 +  -8.4  -3.49668   TCAGAATATTACCTG             GCCCCT AAATCA AGGGGC              TTATCTGCGCCGTTT  72 59
CH53_RS04510 NONE
CH53_RS04515 1026393 .. 1026430 + -15.9    -5.055   ATCTTTAGATAATTG   AAAGCATAGAAGACATT CGAA AATGTCTTCTATGCTTA    TTTTTTAAAGCTTAA 100 92
CH53_RS04535 NONE
CH53_RS04540 1031408 .. 1031432 +  -2.9  -4.16182   GATTTTTTTGAGAAA          TATTGATCGGT TTC ACATATCAATA          TTTGATTTATGATAG  57 72
CH53_RS04545 1031924 .. 1031939 + -10.4  -4.50976   TTAATTGTCAAAAGA              GCTCCC AGAA GGGAGC               TTTTCTGATATAAGC  91 44
CH53_RS04555 1034096 .. 1034128 +  -6.4  -3.96842   CTTTTTAAAACATAT      GGGGTGGATATA GCATTCATA TATATACACCCC      TTGTTGTATTGCCAT  69 33
CH53_RS04560 1035085 .. 1035099 +  -4.4   -2.6175   ATCTTCCATTTTTTG               TATTTT GCC AAAATA               ATTACTTAACATATA  47 438
CH53_RS04595 1044740 .. 1044759 + -12.2  -5.22289   ACAGGCATAAAAAAA            CGGTGAAC ATCT GTTCACCG             TTTTTGTGTTTCATA 100 41
CH53_RS04640 1052569 .. 1052595 +  -8.7  -3.34013   CCCTTTCTTATATAT        GCCACCGTTGCG TGAA TGCG-CGGTGGC         TTGATTGACCGGATC  70 41
CH53_RS04645 NONE
CH53_RS04650 1054516 .. 1054527 +  -4.4  -3.53224   TTCTGCATAGCAATC                CTGT GGGC ACAG                 TTTACCGGCACACTC  54 440
CH53_RS04680 1060617 .. 1060637 + -11.9  -4.86773   ATAAATTCAACGTCA            GGGTGATCA TTA TGATCGCCC            TTTTTCGTGCTTTTC 100 84
CH53_RS04685 NONE
CH53_RS04690 1061588 .. 1061608 +  -8.2  -3.11476   ACGCATCAATCGCCG            GAGCGCCC ATCGG GGGCGGTC            TACTTTTCACTCACT  65 129
CH53_RS04710 1066900 .. 1066913 +  -2.3  -4.93898   GGCTGATGGGTTGTA               GCGCA ATAA TCCGC                TTTTTGTCGTCATCT  70 258
CH53_RS04750 1079081 .. 1079106 +  -8.3  -4.24123   CTTCAGCATAAAAAA         GGGCACAG-TCA TAA TGAACTGCGCCC         TTTTGGCGTTATTAA  82 51
CH53_RS04765 NONE
CH53_RS04770 1084196 .. 1084208 +  -5.5  -2.55402   ACCCTTCAATCCCCC                GTGGC GGA GTCAC                ATTAATGCTGGTTTA  50 8
CH53_RS04775 1084988 .. 1085008 +  -8.3  -3.15544   TGCTGGCCCACAGGG            TAAGCCCCA AAA TGAGGCTTA            TTAATCCCGATGAGC  68 186
CH53_RS04790 1088646 .. 1088675 + -10.8  -2.52464   TCTCTATAGATACTA       TAACCACCGCCA AAACGC TGGAGGTGGTTA        TAAATTAAAGACCGG  76 41
CH53_RS04820 NONE
CH53_RS04825 1100048 .. 1100062 +  -7.8  -3.68827   TAGCGGCCTGATTTT               TCCCCG TCT TGGGGA               TTTCGATAGTGCGTA  70 146
        dksA 1100756 .. 1100781 + -14.7  -3.09273   ACGAAGGGTATAACA         CGGTGCCAGAG TCAC CTCCGGCACCG          TATCTATTACGCGGA 100 229
CH53_RS04835 1101782 .. 1101804 +  -2.7  -5.05079   TTCTCAAAGGAAGCA          CGGTGAGCTA TGAT TAGC-CGCTG           TTTTTCTGTAGTTCT  70 20
        pcnB NONE
CH53_RS04845 1103872 .. 1103886 +  -8.6  -2.72379   ATAAAAATGGTCTGG               TGCCTT GGT AAGGCA               TACTTGCCAAATTCA  65 15
        panB 1104756 .. 1104768 +  -2.7  -3.19449   GAAGAACATACATTC                CAGTA ACT TATTG                TTGATAAAATATTTA  44 20
        panC NONE
CH53_RS04860 NONE
CH53_RS04865 1106881 .. 1106900 +  -9.3  -4.57569   TTGCACCATAAAAAA            GGCGCTT AAACAA AAGCGCC             TTTTTCACACCGTAA  88 60
CH53_RS04885 NONE
CH53_RS04900 NONE
CH53_RS04905 NONE
CH53_RS04910 1116282 .. 1116311 +  -9.4  -3.06796   CACAAAGAAACTGAT       TAACCGGGCA TGGTTCTTTT TGCCCGGTTA        TTCCCTCCACTGCAA  72 91
CH53_RS04915 1117222 .. 1117258 +  -5.8  -3.68908   GCCGCAATCCCCTTC    GGACTTGAAGCCGCAA GTAGG TAGCGACTCCAAGTTC    TTTGAGTAAATATTT  60 18
CH53_RS04935 1124638 .. 1124657 +  -9.2  -2.72549   CTTTAAACAAAAAAA            CGGCCCCT GTTA AGGAGCCG             CTTCATTATCTTACT  67 80
CH53_RS04960 1134181 .. 1134204 + -11.7  -4.98461   CAACATCATAGCTAA          CGGGTCAGC CACAGC GCTGGCCCG           TTTATTTTATTGTTT 100 74
CH53_RS04975 1137045 .. 1137059 +  -2.8  -4.57569   GATGATAGCCATTAG               CAGATT CGA ATTCTG               TTTTTGCGAGCATCG  62 63
CH53_RS04980 NONE
CH53_RS04985 NONE
CH53_RS04990 1140432 .. 1140453 + -12.3  -3.67296   AAAAAGGCTTCGAAA           CAGGGCGTT AAAT AGCGCCCTG            TTTACATCAGTAATC  90 70
        coaE NONE
CH53_RS05005 1143170 .. 1143189 +  -2.2  -3.80855   TGAATTAGCCTGCTG            CTGATGTGG CAA TCA-ATCAG            TTGGTTTTTAAGGAG  51 22
CH53_RS05010 1143460 .. 1143474 +  -2.9  -4.72497   TTTGCTCCCTTCCCA               TTGTA TTCAT TACAA               TTTTATTAATAAATA  65 69
CH53_RS05030 1148130 .. 1148140 +  -6.8  -3.69092   AGACGGAGCTTTGAA                 TGCC AGT GGCA                 TTTCAGCTTCGTCTT  63 126
CH53_RS05115 1167401 .. 1167438 +   -20  -3.14931   GGCGTCACTACTCGG   CCCAACAGCGGCCTCA CCTCGT TGAGGCCGCTGTTGGC    TTCCTACACCATGAA 100 75
CH53_RS05145 NONE
CH53_RS05150 NONE
CH53_RS05155 NONE
        leuD 1180454 .. 1180472 +    -4  -4.46757   ACCGGCATTTTTACG             TTAATTTA TTT TAAGTTAA             TTTTGTGAGTATATT  64 22
        tnaA NONE
CH53_RS05170 1183833 .. 1183859 +  -8.7  -2.87132   TCTATTAAGCTCTTT        CGCA-AGCGCCC TGCG GGGCGCTATGCC         TCTCTCACCCGAGCA  66 33
CH53_RS05190 1190414 .. 1190427 +  -3.7  -3.72576   TGGTTTACGCCACCA               GAGGG CTAA CCCGC                TTTCATCCGCCCAGA  54 17
        tbpA NONE
        thiP NONE
        thiQ 1194561 .. 1194574 +  -2.4  -4.56597   GTTCGGTTTTATCCA               GCAT CGACTT ATGC                TTTTTCAGGAAGGAC  63 523
CH53_RS05220 1197918 .. 1197930 +  -6.3  -4.07885   TTATTGGGTGCTGCC                TGTAG ATG CTACA                TTTTCAGACAGACTC  69 279
CH53_RS05225 1201064 .. 1201078 +  -8.6  -3.65827   CAAAGGAGAGACAAA               TCGGTT GGG AACCGA               TTTGAATAGCACTTA  73 101
CH53_RS05230 1202067 .. 1202083 +  -5.1  -3.18274   TGCCACCAACTTATC              TGGATGA TGC TCACCCA              TTAACTTGCGATAAG  52 224
CH53_RS05240 1205372 .. 1205385 +  -3.7  -3.07816   TACAGTGAATTTTAA               CCCGC TAAA GCGGA                TTACATAAATGGAAA  47 60
CH53_RS05245 NONE
        pdxA NONE
        ksgA NONE
        apaG NONE
        apaH 1209810 .. 1209834 + -11.5  -4.72986   TAAAGATTGAAAAAA          CAAAGGCTCAT AAT ATGCGCCTTTG          TTTTTAGTGAAGATC  95 53
CH53_RS05285 1212750 .. 1212775 + -14.7  -4.15044   ATATGAGCATAAAAA         AGGGGGCGATG TCTC CATCGCCCCCC          TTTCTTAGCGCCCAA 100 253
        rpsT 1225325 .. 1225338 +  -9.5  -5.71712   TGCTTAGTAAAAAGA               CCGGC CTAG GCCGG                TTTTTTTATATCCAA 100 56
CH53_RS05355 1232163 .. 1232186 +  -7.4  -5.61913   GTTTAAATTTAACTC          CCCCTGACTA TTCA TGTTCAGGGG           TTTTTTATGTTTATT 100 59
CH53_RS05360 1234832 .. 1234853 + -11.7  -3.72576   ATACCGGGCAAATAA           TAGCCCATA AAGT TATGGGCTA            TTTCCTGGCAGGGAG  89 44
CH53_RS05380 1239644 .. 1239664 +  -5.4   -3.3705   TGGTTTTGGCAACGG            GAGTTCCT GGCCG AGGATCTC            TTCTACGCTCTCTTT  54 301
CH53_RS05405 1246106 .. 1246125 + -12.2   -5.4492   TCTCTACAGTAAAAA            GCCAGCAT TTCT ATGCTGGC             TTTTTTATATCTATC 100 53
CH53_RS05415 1247723 .. 1247758 +  -6.3  -3.64703   GCTGTAGCTCATCAA    GTGCTGGC-ATATC CAAGTGAGC GGTATCGCCAGCAC    TTTCAATAACCCACC  64 42
        yjjX 1249335 .. 1249348 +  -6.7  -3.65991   ACAGCCCAACAAAGC               TCAGC CAGT GCTGA                TTATCTTCAGGGGAT  63 348
CH53_RS05440 1255066 .. 1255085 + -11.4  -5.31456   ATCGCAACACCCAAA            GCCTGGCT AATC AGCCGGGC             TTTTTTATCACTTAG 100 50
CH53_RS05445 NONE
CH53_RS05450 NONE
CH53_RS05455 1257694 .. 1257708 +  -4.3  -2.75481   CATAATCCCGATGAG               CTTAC AATAA GTAAG               TGATTCGGGTTAGCG  48 36
CH53_RS05460 1259506 .. 1259526 + -14.1  -3.16668   CCAAGTAATATGACA            TCGGCTCAT TTG ATGAGCCGA            TTAATGCCGCTATTC  95 33
CH53_RS05465 1260844 .. 1260876 +   -10   -3.5944   AAGATGATAATTGCA     TTGGCGGGTGATGTT GAGA AACGTC-CCCGTCAA      TTTGACGCTATAAAT  79 53
CH53_RS05480 NONE
CH53_RS05485 NONE
CH53_RS05490 1266641 .. 1266672 +  -5.9  -2.74537   ACGTTTAACCCCTTC     GACCAACGCTCCGGT TCAG GCCGGGGC-T-GGTC      ATTATCTGGTCTGCT  51 33
CH53_RS05495 NONE
CH53_RS05500 1268190 .. 1268212 + -16.4  -3.54424   TGGCATAGCTCGCCC           GATGTGGAGC CTG GCTCCACATC           TTTCAGGACGTGGCC 100 33
CH53_RS05510 1270605 .. 1270629 +  -2.7  -4.17048   GCTACCCAGGCTGCG          TAAACCGTCGG CAA CCCACGGCGTA          TTGTTTTCCAACAAA  59 404
CH53_RS05530 1275671 .. 1275686 +  -4.6  -2.52464   ATTGTTGGCAAACTT              GTGGCC AACT GGCAAC               TGGGTTGCCAACAAA  46 448
CH53_RS05595 1291072 .. 1291084 +  -3.3  -3.85817   CCAACGCCAGTTGGG                CGGGT TTA ACCCC                TTTCTCACGCGCCAT  55 240
CH53_RS05605 1293024 .. 1293034 +    -4  -2.75074   TCGCCTCCGTAGTTG                 CTTT ATA AAAG                 TCATGTTCCGGTACG  46 154
CH53_RS05610 NONE
CH53_RS05615 NONE
CH53_RS05620 1293954 .. 1293968 +  -2.9  -2.93382   GGCCTCAAGTGATAA               TGATA ACCAA TATCA               TATATCACTCTACCA  43 458
CH53_RS05630 1295363 .. 1295378 +  -4.8  -3.52506   CATAATGGTTGAGTT              TAATAC TGCG GTATTA               TATTTCACTTTAATT  56 79
CH53_RS05635 1296971 .. 1296981 +  -2.4  -3.66784   ATTTTGCTAATCCCA                 GAGG TTC CCCC                 TTATGTTAGCCATGA  49 236
CH53_RS05640 NONE
CH53_RS05645 NONE
CH53_RS05650 NONE
CH53_RS05655 NONE
CH53_RS05660 1304761 .. 1304775 +  -4.9  -3.44848   AAAGCGAAACTTTTG               GCTGG AACCC CCGGC               TCTTTGGTCAAACGA  55 344
CH53_RS05670 NONE
CH53_RS05675 NONE
CH53_RS05680 NONE
CH53_RS05685 1311090 .. 1311105 +  -3.4  -3.28712   TAATAAAAGGCCAAA              TTAATA AGGA TATTAA               TTATGCAAAAACCAA  48 38
CH53_RS05690 1312838 .. 1312850 +  -3.5  -2.52896   ATGTTAATACAGATG                TAAAT CAT ATTTA                TCCATTAAGAGATGA  42 34
CH53_RS05695 1314212 .. 1314241 + -13.7  -4.90869   GTCTGGCTCCACAAA       TTGCAGCTCTGGA GTGA TGCAGAGCTGCAA        TTTTTAGTTAATCAT 100 9
CH53_RS05760 NONE
CH53_RS05765 1336655 .. 1336668 +  -5.3  -2.73364   GAGAATCCCGATGAA               CTTAC AGTG GTAAG                TGATTCGGGTAAACG  49 27
CH53_RS05770 NONE
CH53_RS05775 NONE
CH53_RS05780 NONE
CH53_RS05785 1340099 .. 1340129 +  -9.7  -3.01712   TGATGCCTTAACCGA       TACGGGCAGCAGA TTTCC TATGCTGCCCGCA       TGTTGGAACCGCAAG  72 30
CH53_RS05800 1343374 .. 1343387 +  -2.4  -2.94422   ATAATTCAGGAGAAA               GATC ATGAGC GATC                GTATTTTTGCCAGTA  42 37
CH53_RS05805 NONE
CH53_RS05810 1345357 .. 1345388 + -14.6  -3.15087   TGACTCGCATTACTC      CGGGGCTAATAATT ATAG GATTATTGGCCCCG       ATTTCTTGGGTTAGT 100 45
CH53_RS05815 1346581 .. 1346598 +  -4.9  -2.96444   AGATAACACCTATCA             GCAAAAGG TGT CCTTT-GC             GTTATTCTTAGCGCC  51 99
CH53_RS05820 1347192 .. 1347210 + -10.2  -5.27335   ATAGGTAATGGCAGA             GCGCGGCT TGA GGCTGCGC             TTTTTATTTACAGAG 100 45
CH53_RS05835 1348863 .. 1348876 +  -2.3  -4.74132   CAATGATATGTACTG               GCAGA TGCG TCAGC                TTTTTGATCAGCTCT  67 319
CH53_RS05845 1350050 .. 1350072 +  -7.7  -3.61103   GAATGGATTTCCAAA           TACTCCCCG CACAA CGAGGAGTA           TTTAGAATAACGTTA  68 139
CH53_RS05865 NONE
CH53_RS05870 1362392 .. 1362405 +  -2.4  -3.53012   TGGCCAGTACATCGG               CACT ATGGCA AGTG                TTTACAAAGAGGGGG  47 169
CH53_RS05875 1363338 .. 1363369 + -18.9  -4.35524   GAAAAGAATAATGTT      GTAAGATCCCGGC CTCCGA GCCGGGATCTTAC       TTTTAAATTTCAGCC 100 30
CH53_RS05880 1364378 .. 1364399 +    -3  -3.68936   CACCTTTAAGTGCAT           TTACCGTG GTAATA CAGGGTAA            TTCTTCAAATTGCTG  51 470
CH53_RS05890 1366544 .. 1366557 +  -3.9  -3.39878   ATTAACAACTCATTG               TTATC TAGA GATAA                TTCAGTCTTTTTTTT  50 285
CH53_RS05905 NONE
CH53_RS05910 NONE
CH53_RS05915 1369684 .. 1369699 + -11.8  -5.12707   ATAGCCTGATAAATC              CCGGCC AGCT GGCCGG               TTTTTTCGCGTTTAA 100 65
CH53_RS05920 NONE
CH53_RS05925 1371058 .. 1371068 +  -5.4  -3.15663   CGTGTCGAAGTAAGG                 TTGC TGA GCAA                 TTGCTGGAGATAGGT  54 120
CH53_RS05930 1371461 .. 1371486 +  -9.7  -3.27994   CGCCGTTTTAACGAA         CCACCATCGACC GAT GGCCGA-GGTGG         TTGATCTCAAATTCC  75 30
CH53_RS05950 1376660 .. 1376670 +  -8.2   -3.1876   CATTGTAATTGATAT                 CGCC GTT GGCG                 TTGCTCAATAACGTT  64 445
CH53_RS06025 1396473 .. 1396488 +  -6.2  -2.71924   CCTTGAAATACTTAA              CAAGAT GCTT ATCTTG               CTTTGGAGGAAACTC  51 412
CH53_RS06040 1400833 .. 1400844 +    -3  -2.78935   ATCAATTCGTGCTGT                TTCA GGGT TGAA                 TGTCATAAGCGATAT  42 483
CH53_RS06045 NONE
CH53_RS06050 1401496 .. 1401507 +    -3  -3.10053   ACTGATTTTCAATAG                GAAT ATTC ATTC                 TATATTAACGTATAT  44 36
CH53_RS06055 1402200 .. 1402213 +  -2.4  -4.62872   AAGTCACATTGAGCT               GCAA TGTCTT TTGC                TTTTTCAAAGTTCAT  63 292
CH53_RS06065 NONE
CH53_RS06070 1405375 .. 1405408 +    -7  -4.19258   ATATAAGTCTGAAAA     TAAAAGTCATATTT AAATAA GAATATGGCTTTTA      TTTTAGATAAGCTAT  73 308
CH53_RS06085 NONE
CH53_RS06090 1408954 .. 1408990 +  -5.2  -3.01712   TTTCACGTCCGAACG    GTGAACCGGTTTAAAA CTTGT TTTTAAGCCGGTGAGC    TGTTAAGCAAGCCCC  51 51
CH53_RS06095 1410459 .. 1410482 +    -6  -2.70826   TAAAGTGTTCACATA          CCCTATAAGA ATAA TCTCGTAGGG           TGATATATAGCTCTG  54 42
CH53_RS06135 NONE
CH53_RS06140 NONE
CH53_RS06145 1426071 .. 1426095 +  -9.4  -5.71983   ATAGCCAGATAAGAA         CAGCGGGCTAA TTAT TTA-CCCGCTG          TTTTTTTATCATTGC 100 56
CH53_RS06150 1426817 .. 1426839 +  -9.1  -2.75992   AAAAACTGTAATTAT           TCAGGGCGC ATAAC GCACCCTGA           TAGTATTAGCTGGAA  68 30
CH53_RS06160 1428934 .. 1428955 +  -8.1  -4.67123   ACTAAACATAACAGA           GCCGAT-CAT CGG ATGTATCGGC           TTTTAATTATTTTCA  84 36
CH53_RS06170 1431467 .. 1431490 +  -8.2  -3.67597   AGCAAATAGCCTATT          CCCTGCGTACT TGA AGT-TGCAGGG          TTGTTAGCTGCGCGA  70 32
CH53_RS06175 NONE
CH53_RS06180 NONE
CH53_RS06185 1434367 .. 1434379 +  -3.3  -2.73681   CTGATTTCTCTGGAG                GTTCC CAT GGCAC                TGATTGAAGTCAATA  43 6
CH53_RS06190 1435194 .. 1435211 + -14.1  -3.32844   GCCTCAACCGCCAAA             GGGGGCG GGCG CGCCCCC              TTGTGGAATCCCGCG 100 130
CH53_RS06200 1437468 .. 1437489 + -11.5  -2.85459   CCATCCACACCTTCC           CCGCAGCCC TTAT GCGCTGCGG            CTTGTCTTGTGGATA  80 200
CH53_RS06205 1439783 .. 1439804 + -13.1  -3.15544   TGCTAGCCCGCAGGG           TGAGCCTCA AGGA TGAGGCTCA            TTAATCCCGATGAGC  91 134
CH53_RS06210 1440549 .. 1440566 +  -7.7   -2.6356   AAGCAGCCAGCATAG             CGGTGAG ATCA CTTACCG              GTTATCACTATGACT  61 213
CH53_RS06215 NONE
CH53_RS06220 NONE
        phnH 1442437 .. 1442451 +  -2.7  -2.84812   TGGCAATCCCACGAA               CCACC CATGT GGAGG               TGTGCTGATGTACGT  42 3
CH53_RS06230 NONE
CH53_RS06235 NONE
        phnK 1445237 .. 1445253 +  -5.2  -3.06696   GTCTCATCGGTGCTA              CAAAAC TGACT GTTTTG              TCTCTTAGCCAGCGA  51 17
CH53_RS06245 NONE
CH53_RS06250 NONE
CH53_RS06255 NONE
        phnP 1448745 .. 1448761 +  -7.9  -3.28791   GTAAGTCACGCTCGG              CCTCACC TTT GGTGCGG              TTATAAAACACCCAT  64 271
CH53_RS06275 1453241 .. 1453265 + -13.7  -2.91681   ACCAATAACTCAAAC          CTGTGGGGATA AAT TATTCCCACAG          TCTCTGAAATTAAAA  91 231
        potE 1454625 .. 1454651 + -10.9  -3.35597   AAATAGCCATAACTC        GGTGGGTGGAAG GTCA CTTCC-CCCGCC         TATTTAACCAATCAG  80 39
CH53_RS06285 NONE
CH53_RS06300 NONE
CH53_RS06305 1458215 .. 1458236 + -14.5  -3.65996   GTCATAAATAAGCCA           TCGGGCGTA GCAC TACGCCCGA            TATTTCTCTATGCGC 100 34
CH53_RS06310 1459581 .. 1459596 + -10.4  -5.65496   ATAGACATAAAAAAA              CCAGCC CTTG GGCTGG               TTTTTATTTTTAATC 100 62
CH53_RS06395 1478474 .. 1478497 +   -14  -3.51958   TGCACTTTGTTCTGA          TAAAAGGCCG CAAG CGGCCTTTTA           CTTTTCTTTACAACT  95 69
CH53_RS06405 NONE
CH53_RS06410 NONE
CH53_RS06415 1482523 .. 1482549 +  -7.9  -3.04836   GCTGTTCAAATAAAA         GGGCCACCACT GGTGA AGTGGCAGCCC         TAATTTATACTCATA  63 58
CH53_RS06440 1486688 .. 1486719 +  -7.3  -4.67635   TATAAAGAAACTATT      GAGAAACTCGCGT CTTACC GCTCGGGTTTCTC       TTTTCTGCTTTTAAG  83 46
CH53_RS06455 1487994 .. 1488013 +  -9.3  -2.57146   ACCATTTCATCAAAT            CGCCGAA CATTGC TTCGGCG             GTTGATAATATTATC  67 79
CH53_RS06465 1489953 .. 1489986 +  -2.5  -4.61648   CCTTTATGTTTGGTA     TATATAGATGCGGC CTTTTGC GCCGCA-CTGTATC     TTTGTTATTGTTATT  62 48
CH53_RS06470 NONE
CH53_RS06475 1491207 .. 1491226 + -10.6  -5.63504   TCCGACGAACCCTTT            ACCCCCGC TATC GCGGGGGC             TTTTTTTATCCGGTT 100 217
CH53_RS06485 1493849 .. 1493867 +  -8.1  -5.72616   GAGAAATACATAAAA             CAGTGGC CACAA GCCGCTG             TTTTTTTATGTGGCT 100 65
CH53_RS06490 1494619 .. 1494637 + -10.2  -6.38492   CATGAAAAGTAAAAA             CACCGCCC TGT GAGCGGTG             TTTTTTTTTGTTAAT 100 87
CH53_RS06510 1501834 .. 1501856 +  -7.7  -3.58731   CTGTTCACACGGCCC           GATGGCGGC TTTCT GCCGTTATC           TTTAAACAGTATTTT  68 187
CH53_RS06515 1503305 .. 1503330 + -11.8  -3.54382   CATTATTTAAAACAT         TAGCGGCCCC AAAATA GGGGCCGCAA          TTAATTCTGTTCAGA  89 58
CH53_RS06525 1504736 .. 1504775 +  -2.3  -3.14132   AACCAATGCTCCGGC TGCTAT-GGCTACCGCATGC CCA GCG-GCGGTATCCCATA-CA TTGGTCGGCCCAAAG  43 222
        cpdB 1507853 .. 1507885 + -11.6  -3.42395   GTGGTTATATCGCAA      TCTATAACATGTAT TTATT ATGCATGTTATAGA      TATTTAACTACTCAA  85 92
CH53_RS06540 1508618 .. 1508636 +  -7.3  -4.13654   TCAGTAAATGCAAAA             GGGCGAC ATCAC GCCGCCC             TTTCTGGTTTCACCG  73 65
CH53_RS06550 1510444 .. 1510462 +  -3.1  -3.14881   AGGTTGTTTTCTGGA             TGGTTGA CGCCA TCCACCA             TTGCTAACCACATTC  46 114
CH53_RS06555 1511109 .. 1511127 + -11.7  -4.11484   CACCAAATAGCAAAA             CGCCAGC ACGAG GCTGGCG             TTTTAGCAGGTTAAC  91 85
CH53_RS06580 1513481 .. 1513500 +   -15  -5.28176   CTTTGATATGCCCTT            GCCCCCAG ACCT CTGGGGGC             TTTTTTATAAGTGCC 100 98
CH53_RS06590 1514955 .. 1514965 +  -4.6  -4.57569   ATGCCCGCCCTTGTT                 CCTC TTT GGGG                 TTTTTCAGCCGCTGC  71 239
CH53_RS06670 NONE
CH53_RS06675 1535468 .. 1535484 + -10.9  -2.62616   TCGAACTCGCGACCC              CGACCTT GGC AAGGTCG              TGCTCTACCAACTGA  72 184
CH53_RS06700 NONE
CH53_RS06705 1539233 .. 1539245 +  -6.3  -4.15854   AAGCGAGTGACAAAT                TGGTT GTA AACCA                TTTTGAACTGCATTT  71 66
CH53_RS06710 1542873 .. 1542889 +  -6.5  -2.63723   CCAAAGTCATGGGTG              TTGCAGC AAG GCAGCAA              GTTCATTAATCCCGA  54 113
CH53_RS06720 NONE
CH53_RS06725 NONE
CH53_RS06730 NONE
CH53_RS06735 1547746 .. 1547767 + -13.7  -4.85782   TTCATACCTGATCTG           CGGCCTGCT CTTT AGCGGGCCG            TTTCTTTTTCAGCAC 100 44
CH53_RS06740 1548457 .. 1548482 +  -6.2   -4.4078   CGTTAATCTGTAACA         GCAGATCG AAATATGACC CGATCTGC          TTTTCATTCCGAGAA  74 58
CH53_RS06760 1551015 .. 1551040 + -15.5  -4.55849   TGATGGATATAACAA         TCAGGGGATGC CATG GCATCCCCTGG          TTTATTTAAATTTTC 100 70
        aspA 1556451 .. 1556487 + -15.4  -3.00946   TCATCCGGTAGCCCT   GAAAGGCACGCATGCTCC TCT GGA-CA-GCGTGCCTTTC   TACTTTCTGGCGAAC 100 46
CH53_RS06790 1557997 .. 1558007 +  -8.2  -2.85351   TCTTCTGACCTGCCC                 GCGC TTC GCGC                 TATAGTGTCCAGGCA  62 150
CH53_RS06795 NONE
        dipZ 1560141 .. 1560172 +  -9.4  -2.61602   TTGCAGCAAACCATG      CCACGCTAAACCAT GCGA ATGGTCTGGCGCGG       TAGGTTATCAATTAC  70 17
CH53_RS06820 NONE
        garD 1568529 .. 1568559 + -11.8  -2.86071   AGTATCAGCGATATC       ATCAGGCCGGGTGA CAC TCACTCGGCCTGCC       CTTCTTACTATCACC  81 40
CH53_RS06850 1574175 .. 1574187 +  -6.3  -2.60244   TCAGTACAGTTTTAG                TGGTT TTA AACCA                TAAATTCGTTGACGA  54 110
CH53_RS06855 1574322 .. 1574341 + -11.4  -4.64766   ACCACTATTTATAAG            GCCTCGCT GCAA AGCGGGGC             TTTTTCACATCTGGA  93 37
        murQ NONE
        murP 1583012 .. 1583029 + -11.3  -3.44848   TTCAAAAAGCGCTAT             GGCATGG CACC CCATGCC              TATTTGGTGAACCAG  88 238
CH53_RS06895 1586184 .. 1586215 + -12.4  -2.61735   AGTAGCGAATTAAGA      TATTAGCCCCTCTT GTTA GAGAGGGGCTAACA       ATTATAACGTGTTGG  83 50
CH53_RS06925 1594926 .. 1594938 +  -3.4  -3.01712   ATAACCTATACAGCC                CCAA CATCA TTGG                TATTGCAACCAGGCC  45 37
CH53_RS06930 1597107 .. 1597133 + -11.7  -2.75769   TCTGAAACTACTCAT         CCGGTAATTCA ATTTG TGGATTACCGG         CTTATCATTTAACGC  81 59
CH53_RS06935 NONE
CH53_RS06940 NONE
CH53_RS06945 NONE
        hmuV 1601137 .. 1601147 +  -5.4  -4.22346   CTTTGCCTGCCTATG                 GCTA GTT TAGC                 TTTTCGGTCACTTTA  67 258
CH53_RS06960 1603033 .. 1603064 +  -8.7  -3.49048   TTAAAGCTAAATAGA      CGGGCTTCGGTGT AATACA GTACCGAAGCCAG       TATTATTAGTTAGAA  72 69
CH53_RS06970 1607961 .. 1607997 +  -6.7  -2.78725   TAAACTAATCGGATA    GGCCATGAGTGTTAT CAAAACA ATAAAAATCATGGCC    TGCTTAATCACGTAT  57 33
CH53_RS07125 NONE
CH53_RS07130 1633924 .. 1633948 +    -3  -4.02736   ACCCTTGGTTAACTG         GCGTCTGTTCTG GTG CA-AACA-ACGC         TTTCTCATATGCCTT  55 153
CH53_RS07140 1638103 .. 1638124 + -10.1  -2.64199   AACACCGTCGTAAAT           TGTGCCGCC TACA GGCGGCAAA            CTTAATTAATGCCTC  72 28
CH53_RS07145 NONE
        actP 1640138 .. 1640151 +  -9.5  -5.66684   ATTTGGTGGATAAAA               GGCCC CTCG GGGCC                TTTTTTTATGGCTTC 100 45
CH53_RS07180 1647931 .. 1647960 +  -7.9  -3.30441   AGTCACAGCATAAGA       TGCAGGG-GGTCAA TCA TTGCCTTCCCTGCA       TTATGCAAGATCGTC  66 40
CH53_RS07210 NONE
         fmt 1653323 .. 1653338 +  -6.8  -5.32944   ACTTTCCCTTTATTT              GCTGAC GTTT GTCGGC               TTTTTTGGTTATGAA  89 193
CH53_RS07220 NONE
        trkA NONE
        mscL 1656631 .. 1656664 +  -8.9  -4.19746   TTCAGCTTCAATAAA     TGTAATGGCCATCAG AAAT TTGGTGGCCCTTACG      TTATTTTCAAATCAG  85 42
CH53_RS07445 1680832 .. 1680849 + -12.7  -4.18018   CGCAGATAGCAAAAA             GCCAGCC GCAA GGCTGGC              TTTTGACTGACAGAG 100 41
CH53_RS07470 1686188 .. 1686201 +  -9.5  -2.71712   ACCAAGATATTTGAA               GCGGG ATAA CCCGC                CTTTCAGAAAACGCC  70 17
CH53_RS07475 NONE
CH53_RS07480 1688458 .. 1688470 +  -4.1  -3.81951   GCCAGCGCCAACGTA                CTTGA AAC TCAGG                TTTGGTGGTGTGCGC  57 186
CH53_RS07515 NONE
CH53_RS07520 NONE
CH53_RS07525 1695863 .. 1695876 +  -5.3  -2.73364   ACTCATCCCGATGAG               CTTAC ATAA GTAAG                TGATTCAGGTGAGCG  49 147
CH53_RS07535 1697321 .. 1697345 + -14.3  -5.36314   TTAATTCCCCCTAAA          CGGGTGTCGAT ACT GTCGGCACCCG          TTTTTTAATCTTTTG 100 37
CH53_RS07540 1699522 .. 1699543 + -10.1  -2.78712   GAGCAAGCATAACAA           TGGAGAGGC AACA GCCTCTCCC            TAATTGAGTTAACCC  73 29
CH53_RS07555 1701931 .. 1701942 +  -2.2   -2.6186   ACTTTCTGATGATTA                CAGG ACGT TCTG                 ATTATGCAATTCACT  40 13
CH53_RS07560 1702611 .. 1702627 +  -6.5  -2.72455   GCGTGATTACGTGCC              GCCGCAT CCA ATGCGCC              CATTTTTGATTGTGG  53 382
CH53_RS07580 1706224 .. 1706234 +    -4  -3.50639   TCACAGACCTGTAAT                 GTTA AAT TAAC                 TATTGTTGTGGGTTA  52 27
CH53_RS07585 1707401 .. 1707440 +  -4.3   -2.6518   ATGCGCGATTCTGTT  ATGCCACCGAAAC-AACT CCGCT AGTTAGCCTCGGTGGCAA  GTTATCGCTCTTCCC  47 2
CH53_RS07600 1711949 .. 1711987 +  -7.3  -2.75481   GACTGATTTATCGGT   TTTACTGCCCTGCCGCC ATCAA GGTTGCAGGGCAGTGCC   TACTTAAAGTTCACC  60 35
CH53_RS07610 NONE
        nirD 1716449 .. 1716463 +  -3.5  -4.57073   TAAATAACTGGCGGA               TCCGG TAAAT CTGGA               TTTTTGACAAAAATA  64 41
CH53_RS07620 1717457 .. 1717469 +    -2  -2.61264   GGGTATGGTCGCCCC                TTCA ATCAC TGAA                CTTATCAATAGCCAC  40 111
        cysG 1718938 .. 1718959 + -14.5  -2.91199   AGGAAACATTGATGA           TGAAGGGGG CAAA CCCCCTTCA            TATCATTGAGCCTTA  93 39
        mrcA 1732170 .. 1732196 + -11.6  -5.56264   CAAGGCAATATAAAA        GCCGGGAGCTC GTAACA GAGC-CCCGGC         TTTTTTATGTTTGAA 100 90
CH53_RS07700 1735461 .. 1735471 +  -5.4  -4.18019   CTGTAACTTTGATAT                 GCTA GGC TAGC                 TTTATCTGTGGTTGT  67 77
CH53_RS07705 1736274 .. 1736292 +  -7.5  -2.75481   GTGATTAAAAAGAGG             TTTAGGC CGATA GCCTAAA             TAATTCGAGTTGCAA  60 33
CH53_RS07710 NONE
        hslO 1737761 .. 1737788 +  -6.3  -3.98236   AATAACAATAATGAT        TAGTTGGGTGC TGACTC GTGCCCAGCTA         TTTCTCCTGGCGTTT  69 39
CH53_RS07720 1739597 .. 1739614 + -12.7  -5.07652   GTAGTGATTATGGCA             GGGGCAC ATTC GTGCCCC              TTTTGTTTTCCGCAA 100 56
CH53_RS07725 1740334 .. 1740345 +  -3.6  -3.32022   ACTCACACCACCATC                GGTG GCTT CGCC                 TTCATATCTAACGGC  48 155
CH53_RS07745 1745679 .. 1745696 + -12.7  -5.16572   TGATCTCTCTATTCA             GGGCCAC GTTG GTGGCCC              TTTTTTCACTTAGCT 100 38
CH53_RS07750 1746615 .. 1746633 +    -3   -3.3636   CCTATTTTGGCTGCC             GGGCTGTG TGT CAAAGCGC             TCTTGTGTAGTCTGA  46 57
        feoB NONE
CH53_RS07760 1749280 .. 1749304 + -15.1  -3.60112   TCATTAAGTCAGAAA          TAGAGATGCCC GCC GGGCATCTCTG          TCTTATTATTACTTA 100 34
CH53_RS07775 1751385 .. 1751399 +  -2.1  -3.21276   CGAACCTTGTAGTCA              C-CCCA GCAA TGGGCG               TATTATAACCGACAA  43 29
CH53_RS07780 1752369 .. 1752382 +  -6.7  -2.50307   CTCTCACCCGAATCA               CTGAC TGAT GTCAG                CTTCATCGGGATTTG  56 378
CH53_RS21855 NONE
CH53_RS21850 1752609 .. 1752621 +  -4.8  -2.57132   TTGGCAGCCTACTGA                GGGA TTCCC TCCC                CTTATCACCCCGCCG  48 86
CH53_RS07795 1760199 .. 1760245 +  -5.4  -3.36991   TATAGCAATAAGTTA CCACTGTACTGCAATTTACATT AAACG AATGTTG-TTGCGGT-CAGTGG TCTTTGGCAATAATA  56 55
        glpE NONE
CH53_RS07805 NONE
CH53_RS07810 1763046 .. 1763064 +  -2.3  -4.74676   TGATAACAAAATTGT             TACCTCC ATCAC GGGGGAA             TGTTTTTTTTTGGTT  64 196
        glpD 1764718 .. 1764739 + -13.1  -5.30348   ATCTGTTTAAAAAAA           CCCTCTTCA CTGT TGAAGAGGG            TTTTTATTATTAACT 100 60
CH53_RS07845 1776620 .. 1776634 +  -2.8  -4.57837   CATGCCGCCGCCATG               CCAGAG TAA TTTTGG               TTTTTAACAGACTAT  65 107
CH53_RS07855 NONE
CH53_RS07860 1780141 .. 1780162 +  -4.3  -4.14859   TTAATCATATAAAAA           ACCCTGACC ATAA GATCAGGGC            TTTATCGTTATTACT  63 94
CH53_RS07870 1782278 .. 1782288 +  -3.2  -4.58395   GGGTTCTTCCAGCGC                 GTCA AAC TGGC                 TTTTTAGCAGATCGG  66 194
CH53_RS07880 1784770 .. 1784782 +  -3.3  -3.20367   GCACTAAACCGGACT                CACGC ATC GCCTG                TTCATAACCTTGTTG  46 442
CH53_RS07895 1787503 .. 1787523 +  -4.7  -2.75844   CTTTTTTCACTCCGT            CGAGGAAAC TGA GTTTATTCG            CTTTCACATCAGCCA  47 269
CH53_RS07915 NONE
CH53_RS07920 1795418 .. 1795447 + -10.1  -5.04249   ATTTCTGCTCACATC       CAGTAGGGTAGGGT TCC GCCC-ACTCTACTG       TTTGTTTTTTAACCA  93 82
CH53_RS07935 1799362 .. 1799397 +  -5.4  -2.97188   TACATTGGGGAAATT    GCCATCCTCCCTGCTCA TTA TGAGCAGG-ATCACGGC    TATCTGGTGCTGTAA  53 155
CH53_RS07945 1801689 .. 1801701 +  -6.3  -4.57882   TTATCACTCTCACTA                TTGTG AAG CACAA                TTTCTTATTATTGAC  77 48
CH53_RS07955 1804086 .. 1804117 + -12.4  -4.05747   ACTGACCCCATGATA      GCCTCTTGATCAGG TATA TCTGGTTAAGAGGC       TTTATCTCAACTATC  93 53
CH53_RS07965 1807340 .. 1807359 + -11.4   -5.3671   CACGGTAAATAAAAA            GGCGGCCT GATT AGGTCGCC             TTTTTTAATTGTCTT 100 119
CH53_RS07975 1808914 .. 1808932 + -13.1  -5.67063   CATCATCACCTCTGA             CGCCCGC CTTTA GCGGGCG             TTTTTTTATGCTGAA 100 65
CH53_RS07980 1810494 .. 1810538 +  -9.6   -4.7261   TGTAAGTAAGACTCT ATTCCCATATTCTTTGAGGTA ATAA TACCT-GGAGAATATGGGAAA TTTATTTTCATAGAT  93 36
CH53_RS07985 1812194 .. 1812219 +  -9.7  -2.71144   AGAATAGATGATTCA         GGTGGCTGC AATAACGC GCAGCCGCC          TGATTGAAGCCAATA  70 55
CH53_RS08000 NONE
CH53_RS08005 1817673 .. 1817698 +  -8.3  -5.72254   GTAAAAAAGCAGAAA         GGCTATGGACC GCAG GGTTGATAGCC          TTTTTTATTGTTTGA 100 47
CH53_RS08015 NONE
CH53_RS08020 NONE
CH53_RS08025 1821699 .. 1821711 +  -4.8  -3.79505   GCCCCGCTTTCACAC                CAGC ATCAG GCTG                TTTAAATGTTCCTTT  59 296
CH53_RS08040 1825127 .. 1825151 +  -9.4  -3.09516   ATTCTGTTCTGAACA         G-CGGGAAACT TGTC AGTTTCCCGAC          TTACATCATAAAAAA  72 40
CH53_RS08045 1826263 .. 1826281 +  -4.4  -3.76492   GGCGCGATTATCCCA             CTGGCGGC AAT GCCCGCAG             TTTAATCGCGTTCGA  56 2
CH53_RS08130 NONE
CH53_RS08135 NONE
CH53_RS08140 1856620 .. 1856650 + -17.1  -2.55351   TACCTGTGGCTATTC       GATAAAGGGTGCA TTTAT TGCACCCTTTATC       ATTCATATCCAAACA 100 55
CH53_RS08170 1863718 .. 1863737 + -12.2  -3.78904   AAACATGAAAAAAAA            CCCTGACT GAAA AGTCAGGG             TTCTTAAATTTGGTC  89 16
CH53_RS08210 1872397 .. 1872426 +  -9.3  -2.78216   CTAAAAAGCAGCAGT       ATGGCCGCTGA ACCGATTA TCAGCGGCCAG        TCGTTGCTAAGCCTC  68 37
CH53_RS08255 NONE
CH53_RS08260 1888101 .. 1888113 +  -6.3  -3.39327   TAAATACGCCAAAAT                TCACA ATC TGTGA                TTCTGGATATACCAC  59 434
CH53_RS08285 NONE
CH53_RS08290 1896099 .. 1896131 +  -2.7  -4.56597   GAATGCCCGGCGAGC     CAGC-TTAACCAGC CAATTT GCTGGTTCATGCAG      TTTTTAAACCACACC  65 208
CH53_RS08300 1898448 .. 1898488 + -11.9  -5.08601   TTACTGCGGAGTAGT  TTTAAAGCGGGAGAGAAGC AGC GCTTTTCTCCCGCTAAATA  TTTTTGTTAGCGTAA 100 27
CH53_RS08340 1908741 .. 1908757 +  -2.3  -3.06399   ATAATTAGTACGGCA              TTGATAA TCA TTTTCAA              TATCATTTAATTAAC  42 50
CH53_RS08345 1909543 .. 1909567 + -15.1   -5.1356   AGTACGAAAGACACA          TGCCAGCAAGG CCA TCTTGCTGGCA          TTTTTATTGCTAAAG 100 107
CH53_RS08350 1911842 .. 1911870 + -11.8  -3.64831   AAACCTCAGTACCCG        GCAGGGATAGCC ATTGC GGTTATTCCTGC        TTATCTCATTGTTAA  89 50
CH53_RS08355 1912686 .. 1912711 +  -4.7  -2.77283   TTTATTGATAAACTT         GACTGTATCTC AATT GAGATACAAAC          TCAGTTTATTGATGA  48 76
CH53_RS08360 NONE
CH53_RS08365 1913592 .. 1913615 +  -7.4  -4.66456   GACCCGCACTTCTTT          CAGGC-GCTGA ATT TCAGCCGCCAG          TTTCTCTTTTTCTTT  83 298
CH53_RS08380 1916251 .. 1916276 +  -2.5  -2.95521   TTTGCTGATAACGCT         GGCGTTGCATGG CAA TCA-GCGACGCG         TCTGCTTCATCTGGG  42 137
CH53_RS08415 NONE
CH53_RS08420 NONE
CH53_RS08425 1928008 .. 1928034 +  -4.6  -3.24144   GGAGTTAATTATGCA         GTTGAACTTT ATAAGTA AAAGTTTAAC         ATTATTATTTTTTAT  51 121
CH53_RS08430 1930324 .. 1930341 +  -5.5  -2.65832   GCAGATAAAAACCAG             CAACGGT GCTT ACCGCTG              GTTAATGATTTTTTA  51 184
CH53_RS08435 1931113 .. 1931145 + -11.3  -3.33696   ACTTCTGATACTTTT      CCTGCGGATAACGTC TTA GGCTTTATCCGCATG      TTCCTTGCGACAGCC  85 58
CH53_RS08445 1933463 .. 1933484 + -12.3  -4.28994   AATAATTCGACGCCA           CCAACCTGC CAAC GCGGGTTGG            TTTTCATCAGTCATA 100 36
CH53_RS08450 NONE
        malS 1937004 .. 1937018 +    -5  -3.17723   GCCCGCTTTTATCTG               CGAGTA TGG TACTTG               TTCACTTACGGATAA  53 114
        avtA 1938592 .. 1938606 +  -5.6  -2.75064   CCGTGGCATAAGAGA               GCGCTG CCG CACCGC               TGGTTGGGTGCAGGC  49 314
CH53_RS08480 1942465 .. 1942483 +    -6  -2.87501   GGGGGAAGCCAGCCA             TAACTGCA CGA TGCCGTTA             TCATCTTTCATCAAA  52 362
CH53_RS08515 NONE
CH53_RS08520 NONE
CH53_RS08525 1951338 .. 1951360 + -10.7  -2.94337   CGGTTTTATTTCAAG           GCCGATAAA CATAA TTTATCGGC           TGGTATTTTAGCATC  78 65
CH53_RS08535 NONE
CH53_RS08540 NONE
CH53_RS08545 NONE
CH53_RS08550 1956600 .. 1956633 +  -6.1   -2.9914   CCCAAATTTAAATTA     CTTCTTAAGGTTGTG ATGA CGCAACCTTAAAAAC      TGTGTCTGGAGAATG  56 116
CH53_RS08555 1958281 .. 1958303 + -11.3  -2.90054   ATTAGTGTAAAATAT           CAGGGGCCA GCAAA TGGCTCCTG           TCTCATACTTTACTA  80 57
CH53_RS08560 NONE
        rpmH NONE
        rnpA NONE
CH53_RS08605 NONE
CH53_RS08610 1969120 .. 1969138 + -14.6  -4.36508   TCATAAGTATTAAAG             GGCGGTCA ATA TGACCGCC             TTATTCTTTTTATAG 100 54
        trmE 1970600 .. 1970629 +  -2.3  -2.91264   TGTTATAGAGCTGGA       G-CAGATTATCG CTAATTT TGATAATCTGGC       TCTATGAGTCCGAAC  41 47
CH53_RS08620 1971927 .. 1971953 + -12.3  -3.21595   GTTATAGCGATAGAA         CCCGCTGCG GAATTTGCG CGCAGCGGG         TTGATAATCCGCCTT  85 47
CH53_RS08625 NONE
CH53_RS08630 NONE
CH53_RS08635 1975000 .. 1975020 +  -3.3  -3.21218   AGCTTTGCTCCTGAC            TGGATGACA TGA TTTCATTCA            TTAATGCTGCCACGT  46 341
CH53_RS08645 1977651 .. 1977677 +  -8.6  -3.32022   ACTCATGATTGAAAA         CCCCCACTGGCC GCT GGTGATTGGGGG         TTACTCTCTCGCCCC  70 40
CH53_RS08650 NONE
CH53_RS08655 1979914 .. 1979926 +  -6.3  -3.06183   TAACATAACGGCACG                GTGAT GAA ATCAC                TTCGCTAACAATAAG  56 284
CH53_RS08660 1980459 .. 1980489 +  -8.9  -4.91511   AGATTATAACGACAA      CGCCCCCACCCTCG GTGT CGAAAG-GGGGGCG       TTTTTATGATCGGCT  90 40
CH53_RS08670 1982775 .. 1982787 +  -6.9  -3.12942   TTACTCGTCATTAGT                GTGCC GAC GGCGC                TGGTTTATTACTCAA  60 27
CH53_RS08720 NONE
CH53_RS08725 NONE
CH53_RS08730 NONE
CH53_RS08735 1999782 .. 1999818 + -16.7  -3.81144   TCACTATTGGATAGG    CAGGGCATCGGTCATTA CAT TGATGACCGATGCTCGG    TTGATTGTTTTTTAT 100 127
CH53_RS08740 2001670 .. 2001686 +  -2.3  -3.71848   ATATTACTAACTGAC              CATGA GGAAATA TCATG              TTATTACTGAGAGAA  49 27
CH53_RS08745 NONE
CH53_RS08750 NONE
CH53_RS08755 2006936 .. 2006965 +  -8.7  -3.11222   TGGCCATAAAAAAAA       TCCGG-TATGCTTT TAA ACAGCATAACCGGA       CTTTTCGAGTTAACG  68 270
CH53_RS08835 2024270 .. 2024298 +  -6.5  -4.85129   TATTAATCCCCTTCA        CTCGCGAAGGTTG CAA CCGCCAGCGCGAG        TTTTTAATCTATGCT  82 100
CH53_RS08840 2025048 .. 2025062 +  -2.7  -4.57837   ACTAGCGCTTCCAGC               GGCGC ATCAA GCGGC               TTTTTAGACCAGTAT  62 36
        trkD 2030197 .. 2030216 + -12.2  -5.28778   AGATTTAACCTGAAA            GGCCGTTA TGAT TAACGGCC             TTTTTTGTGCCTACT 100 33
CH53_RS08860 NONE
CH53_RS08865 NONE
        rbsC NONE
CH53_RS08875 2034281 .. 2034325 +  -2.1  -2.70932   AAGCAGGGCATATAA CGCCGCTACCCTAAAACG GAAAACAAAA CGTTAC-GGGTGGCGGTG TCATTCACAAAGGAA  40 48
CH53_RS08880 NONE
CH53_RS08885 2036290 .. 2036304 +  -3.5  -3.64933   GTTAAACTTCACCCT               CCGCA GATTG TGTGG               CTTTTTTGCCATTAC  52 36
CH53_RS08900 2040640 .. 2040651 +  -5.8   -4.7497   ATTGTGTAATAAGGC                CTCG GCAT CGAG                 TTTTTACTGCATCAC  75 121
CH53_RS08905 2040852 .. 2040889 +  -8.7  -3.45839   ACATTATCAACTGAA   TATCTTAAAGATGACTT TAAC GAGTCGTGTTTAAGATA    TTGCTCTTTAACAAT  72 60
CH53_RS08910 2044088 .. 2044098 +  -6.8  -4.78848   GGCTTAACCTTACAA                 CACC AAA GGTG                 TTTTGTGTTTGAGAG  81 10
CH53_RS08915 2044493 .. 2044512 + -13.6  -5.24799   ATGAATAAAACAGAA            GGCTACCC TGAT GGGTAGCC             TTTTTGTATTTATAG 100 204
CH53_RS08930 2046144 .. 2046158 +  -7.2  -3.17218   TTATACAGACTGAAT               GTTGTT ATG AACAAC               TCTGCTTTTAATTTT  63 110
CH53_RS08935 NONE
CH53_RS08940 2047799 .. 2047824 + -11.9  -3.81339   GTAATTTTGTAAAAG         GAGGAGCTGGT TTTT GTCAGCTCCTC          TTTCACTTATCAATA  91 37
CH53_RS08945 2051420 .. 2051445 + -19.1   -5.4756   TGGCTGTATATTAGC         CGCCCCAGTCA TTTA TGACTGGGGCG          TTTTTTATTGGGATT 100 258
CH53_RS08955 NONE
CH53_RS08960 2054777 .. 2054787 +  -5.4  -3.53563   ATGTCCCCCCCAATG                 GTCA ACA TGAC                 TTTGAGGGGGCGTCT  58 43
CH53_RS08980 2061351 .. 2061375 + -13.6   -3.7511   TTGGTACTGCTGATA          CTTAGGGCGC TAGCT GCGCCCTGAG          TTCTATTCTCCGCAC  95 47
CH53_RS08985 2062291 .. 2062304 +  -5.3  -2.73364   GAGAGACCCGATGAG               CTTAC TGAA GTAAG                TGATTCGGGTAACAC  49 93
CH53_RS08990 NONE
CH53_RS08995 2063751 .. 2063764 +  -6.7  -2.81832   AGAGGCAGAATAGCG               CCTCA AGAC TGAGG                GTTACTTTATTGATA  57 39
CH53_RS09000 2064735 .. 2064774 +  -8.7  -4.04922   AATTAATATCGGCCT  CG-ACACTCGTTCAACTG ATAAG TAGATGAGCGAGTGTACG  TTTATAACTTTCTCT  79 35
CH53_RS09005 2067414 .. 2067429 +  -4.7  -4.00038   TCACCGTCTTCCACT              TGGAC AGTATC GTCCA               TTTCTGGTGGTCATA  61 75
CH53_RS09010 2068269 .. 2068300 +  -3.7  -2.87683   CTGCTTGATAAGTCG      TGTACGGC-CTGCT TGATC AACAGCGCCGTACC      TGTATACCCCCATAT  46 33
CH53_RS09015 2069019 .. 2069050 +  -7.4  -4.98061   ATTTGAAATAGTAAA      CCGATAAACGGC GCTATCTG GTTGTTTATCGG       TTTTCTTTAATATCT  85 51
CH53_RS09020 NONE
CH53_RS09025 NONE
CH53_RS09030 2071414 .. 2071428 +  -5.7  -4.00042   GCCAATACTGGCAGT               GGCTT CCAAT AAGCC               TTCTTTGGTGAACGC  66 385
CH53_RS09045 2075850 .. 2075869 +  -9.2  -4.20768   GGGTAACTGCACTTA            GGGGTGGG TTTA CCTGCCCC             TTATTTATTAAGCGT  85 35
        ligB NONE
CH53_RS09085 2085286 .. 2085296 +  -6.8  -2.71134   TTACAAGAGATAAAA                 GGCT GAT AGCC                 CTATTGTTGGTTTAG  56 69
CH53_RS09095 2087718 .. 2087747 +  -9.4  -3.59979   GTGTTGTGTTACCAG       CCAATGCTC-CAG TTCAT CTGCGGGCATTGG       TTTGGCGTAAAGAAA  71 72
CH53_RS09140 2096159 .. 2096173 +  -7.8  -3.48378   AACACCCGGTGTAAC               GTGGTG TAA CACCGC               TGTTATTGTGCCGGT  68 171
CH53_RS09170 2100559 .. 2100577 +  -8.1  -3.16049   TTTTTATATTATATT             GGCGATC TACTT GGTCGCC             TCTATTACATTATTA  65 61
         rph 2104959 .. 2104976 + -11.3  -5.81412   ACAATAATTGACTAA             GGCGACT TGCT AGTCGCC              TTTTTTTTGCCTGCA 100 34
        pyrE 2105729 .. 2105742 +  -9.5  -4.76171   TTAAGCCAGCAAAAA               GGGCC AAAT GGCCC                TTTTATCGTTTTTTG  93 52
CH53_RS09215 2109022 .. 2109036 +  -6.4  -3.76373   AGAGCAATAATAATT               GATCCT TTC GGGATC               TTTAGCTGTTCGGGA  64 39
        rpmB NONE
        rpmG 2109713 .. 2109728 + -11.8  -5.60689   GGTGGATTATGAAAA              CCCGGC TTCG GCCGGG               TTTTTTATTATATAA 100 51
CH53_RS09230 2110860 .. 2110872 +  -4.8  -3.21416   GGTGGCGGTTCATAT                TGGC CAGTT GCCA                TTCATACTCAAAGTC  50 302
CH53_RS09265 NONE
         tdh 2119588 .. 2119614 + -14.5   -4.6971   TTGCAGGATTGAGAG         CGGGGCAGTCA GATGA TGATTGCCCCG         TTTTATTAAGGTTTA 100 277
CH53_RS09290 2124356 .. 2124381 +  -3.4  -4.33274   AATCTACCACTGGCG        CGC-GGCAAGTA ATCA TA-TTGCCTGCG         TTTTAGTGATATGAG  62 14
CH53_RS09295 2124756 .. 2124768 +  -3.3  -2.66695   TTGATGGACAGAGCC                CACGG CGG CAGTG                CTATTTAATACAGAC  43 63
CH53_RS09300 NONE
CH53_RS09305 2126390 .. 2126401 +  -2.2   -3.2827   GCTCCAATGAATAAG                GGTA TCGT TGCC                 TTGGTCGTTCCCTCG  45 118
        cysE 2127550 .. 2127561 +  -2.2  -4.66537   GGCTATCAGCTTGCA                TCGG AATC CTGA                 TTTTCTGTTGAGCAG  67 310
CH53_RS09320 2129603 .. 2129631 +  -4.7  -4.08216   TGATTTCCAGCGTTT       TGCCCA-TTTGG TCTGCT TCAAACTGGGCA        TTTTCCAGCACGTCA  62 463
        cpxP 2132024 .. 2132042 + -14.6  -5.74122   CCATCCCTGTCTTTC             GCCCTCCA TGA TGGAGGGC             TTTTTTTGTATGCTA 100 80
CH53_RS09350 2133570 .. 2133586 + -12.3  -5.50499   AGCTGTAACGAGAAA              GCCCCAA AAT TTGGGGC              TTTTTTTCGATGTGG 100 255
        fieF 2134730 .. 2134751 +  -2.3  -3.62531   AAATACCGCCAGATG           GCATGACTTG AAT CAATTCA-GC           TTGGTGTTTTTGCTA  49 95
CH53_RS09360 2135887 .. 2135905 +  -9.5  -4.81249   TTGTCCGATAAGAAA             GCCTCCG TTTAC CGGGGGC             TTTTTGCATTTAACC  93 50
CH53_RS09365 2137386 .. 2137409 +    -6   -5.5074   ACCAAAACAAAAAAA          CCGGGGCTG TTTACGT CA-CCCCGG          TTTTTTATTACGTTC  91 147
CH53_RS09380 2139565 .. 2139599 + -11.6  -3.68324   ACCTTGCTATCTAAA     GTGAACCAAGGG AAATATGCCAA CCCTTGGTTCAC     TGTTTATTACCAATA  88 48
        emrD 2141866 .. 2141891 +  -6.1  -4.52047   TGAGGTTGATAAAAA         CGGGTACCG GTTTAATG CGATACCCG          TTTTATGCTCTGATA  77 41
CH53_RS09410 2146612 .. 2146631 + -12.2   -5.0133   GCTAAGTAGTAAAAA            GGGCGATA TCAG TATCGCCC             TTTTTTGCGAGGATC 100 108
        rpmE 2155476 .. 2155505 + -18.1  -4.02132   TTATTGCCCGTCAGA       TGAAAAAGGCACC TTCG GGTGCCTTTTTCA        TTTCTACATTTCAGG 100 41
CH53_RS09460 NONE
        metL 2159841 .. 2159874 + -13.9  -3.24021   CTGTAATTTGCATTA     ATTCGCCTCTTCTGC TTAA GCGGAGGAGGCGAAA      TTACCTCTTTAACCC  93 35
        metF 2161053 .. 2161066 +  -9.5  -4.32034   CCGTAAGTTGTTAAA               GGGGC GCAG GCCCC                TTTTCATCATAATCA  90 35
CH53_RS09485 NONE
CH53_RS09490 2167648 .. 2167662 +  -2.1  -3.22076   CTGCCTTGCTGCCAC               TCCAA CTACT TTGGG               TATATTATGAGTTTT  43 133
CH53_RS09495 2169102 .. 2169123 + -12.3  -4.35524   TATTAATATTGATAA           TGGGCCGCT TTAT AGTGGCCCA            TTTTACATTTAAAAG 100 50
CH53_RS09500 2172221 .. 2172238 +  -8.5  -2.89421   CGTCTGTAGTCACAC             TGACTCA GTGA TGAGTCA              TATAATGGTTGTTAA  66 117
CH53_RS09505 2173064 .. 2173087 +  -5.4  -3.03624   ATATTCAGATAAGTT          TATTGGTCTA TTTG TAGAGCAATA           TAATTTAATTAATGA  53 210
CH53_RS09510 2173894 .. 2173907 +  -5.3  -2.90725   TCGGTGGTAAAGGTG               TCTCA ATGA TGAGA                TATAGTATAATTTAA  50 105
CH53_RS09515 2174566 .. 2174585 +  -3.5  -2.78384   GGGCGTAACAGAAGG            CGGCGAA GCATTA TTGGCCG             TGTAATAAAGGCAGC  44 1
CH53_RS09520 NONE
CH53_RS09525 2177983 .. 2177997 +  -7.2   -3.9392   ATAAAATTTTGGCGA               GTTACT TGG AGTAAC               TTATTTGAAATAAAG  71 37
CH53_RS09530 2178923 .. 2178939 + -10.9  -3.03452   TTTGACCAAACAGAG              GGGGTAA ATT TTACCCC              TGTCTAATCTTATTC  78 77
CH53_RS09555 2183335 .. 2183373 +    -9  -3.11584   CATAGTCGGATAGTT   GAAGGTCGTATTAACGAA ATA TTCGATAGTATTACCTTC   TCCTTTCTGTTCCAT  67 74
CH53_RS09565 NONE
CH53_RS09570 2186031 .. 2186061 + -18.5  -3.69884   GACATATTTTAAAAC       GCAAAAGGGCAAC ATCAC GTTGCCCTTTTGC       TTATCTATTGCCTGT 100 65
        btuB NONE
CH53_RS09585 2190674 .. 2190695 +  -8.1  -2.94232   GACCAAAGCAGTACA           CATTTGAAC TTCG GTTCGAATG            CTTATTTGCAGAAAG  63 389
CH53_RS09590 2192367 .. 2192390 +  -5.2  -3.81929   TAACGAGCAAATAAG          GCCGGGCTGA GAGA TTAGTCGGGC           TTTAGTACCTTGTTG  61 87
CH53_RS09595 2192530 .. 2192545 +  -2.4  -3.49475   TTTATCCCCATAAAC              GTCGCG TGAC TGCGCC               TTGTCTGAGAATGAG  47 74
CH53_RS09600 2192679 .. 2192725 +  -3.9  -3.45839   ACCATATAAAAAAAC TATTTCAAAACGTACTGCGGTC GCAA GGCA-CAGTGTGTTGTGAAATA TTGCTCTTTAACAAT  52 37
CH53_RS09605 2195925 .. 2195935 +  -6.8  -4.78848   GGCTTAACCTTACAA                 CACC AAA GGTG                 TTTTGTGTTTGAGAG  81 10
CH53_RS09610 2196195 .. 2196207 +  -2.6  -4.07568   TGGTAACTGACAAAA                TCGC GTAGA GCGG                TTTTGCACAGCGCGG  55 69
CH53_RS09615 2196364 .. 2196391 + -12.9   -3.0497   CGCCACTTATTTAAA        TTATGCCTGCT TATCTT AGCAGGCATAA         TGTTAAGCGTAATCT  91 36
CH53_RS09620 2196492 .. 2196511 + -11.4  -5.71712   CTGCCATATAAATAA            CCCTTCGC GAAA GCGAGGGG             TTTTTTTATGTCAAA 100 35
CH53_RS09625 2197968 .. 2197986 + -13.1  -2.97171   GCTATTGATTCAAAT             GGCGGGG GCTTG CCCCGCC             TACTTTCGTCACCTG  91 33
CH53_RS09630 NONE
CH53_RS09635 NONE
CH53_RS09640 2202011 .. 2202031 +  -6.9  -3.53224   CGTTATCAATAAATC            CAGTTGC CGTTCGT GCAACTG            TTTCACCAGCGAGTG  61 477
CH53_RS09650 2202936 .. 2202976 +   -15  -3.72893   TGTTAGCGGCTTGCT CTTA-CCCGAATCACTTAC TTAA GTAAGTGATTCGGGATACG  TTTGCTAGCGGCCTA 100 76
CH53_RS09660 2206830 .. 2206844 +  -2.8   -2.6927   GCTGGAGAAAATCTC               ATGATG CAC CATCAA               TCCTCTATCCAACAT  41 22
        ilvM NONE
CH53_RS09670 2208074 .. 2208097 + -10.3  -4.07568   TGGCAGACAGAATCA          GCAGGTGGT TCGTTC GCCACCTGC           TTTTGACACCACAAA  86 45
CH53_RS09675 NONE
CH53_RS09680 2211643 .. 2211664 +  -7.3  -5.73978   TCAATAGTAATAAAA           CTCAGTGCT AATA AGTGCTGAG            TTTTTTATTTCTACT 100 74
CH53_RS09685 2212536 .. 2212550 + -11.4  -5.08824   AAATGCTTCGATCAA               CGGCTC ATT GAGCCG               TTTTTTGGGTACACA 100 57
CH53_RS09695 2215189 .. 2215216 +   -20  -6.02914   CTCTGCGTGAAACAG        GCCGCTGCCATT AAAT AATGGCAGCGGC         TTTTTTTTATCTCAG 100 85
CH53_RS09700 2216195 .. 2216206 +  -7.2  -4.52857   ATCAACTCGAATCAG                GGCG GTAT CGCC                 TTTTGTCTCAAGGGT  81 411
CH53_RS09735 2225894 .. 2225918 + -12.1  -3.01712   AATGTCACGTTGCGG          GCACCGCCACC AAT GGTGCTGGTGC          TCTTGGCACGCAGGC  81 494
        trxA 2231004 .. 2231014 +    -4  -4.00934   CATCTAGCTTATTCT                 TTAG TAT CTAA                 TTTACTCTTTAGCAT  59 320
         rho 2232614 .. 2232633 + -10.7  -5.46698   TAAAATCAGTCAAAA            CGCCACG CACAGT CGTGGCG             TTTTTTGCTTTTGGA 100 47
CH53_RS09765 NONE
CH53_RS09770 2235202 .. 2235214 +  -3.4  -3.32832   GACCTTAAAGAGATT                CACT GTGAA AGTG                TTGACTGTTTTTGGC  48 157
CH53_RS09775 NONE
        wecC NONE
CH53_RS09785 2238694 .. 2238717 +  -2.4  -4.27259   TAATCACTGGGATGA          CGTCATCCAG TAGT TTGCATGATG           TTTTGCCTGTGTCTA  56 60
CH53_RS09790 NONE
CH53_RS09795 NONE
CH53_RS09800 NONE
CH53_RS09805 NONE
CH53_RS09810 NONE
CH53_RS09815 NONE
CH53_RS09820 2246078 .. 2246098 +  -3.3  -5.56112   CAATATCATTACGCC            TTAATTCCA TTA TGGAATCGA            TTTTTTAATTTTTAT  83 108
CH53_RS09825 2247791 .. 2247803 +  -4.8  -3.40403   AAAGTAATTGGCGTT                GCAG GTCGG CTGC                TTGTAGTGGCGACGC  54 34
CH53_RS09830 2248183 .. 2248199 +  -3.7  -2.56596   GTAAGCTGTAAAGAA              GTTATGG TGG CTATAGC              TCAGTTGGTAGAGCC  44 91
CH53_RS09835 NONE
CH53_RS09840 NONE
CH53_RS09845 2248532 .. 2248546 + -12.8  -5.86965   CAATTTCAGAAGAAA               CCCCGC AAT GCGGGG               TTTTTTTTCGTCGGT 100 39
        cyaA 2256883 .. 2256893 +  -4.6  -3.49924   TCTTCACCTGCCTGC                 GTGG TGG CCGC                 TTGTGATAATTTGGC  55 219
CH53_RS09880 NONE
        dapF 2258632 .. 2258648 +  -2.4  -3.44325   TCATGCAACTCGAAT              TATTTA GGGTA TAAATA              TTCATTATGACGGGT  47 140
CH53_RS09890 2259385 .. 2259410 + -10.5  -3.81259   ATGACCGAATTCAGT         GCCTC-ACTTGC CCC GCAGGTAGAGGC         TTTCCTGCGTTATCT  84 37
        xerC NONE
CH53_RS09900 2260984 .. 2261002 +  -2.4  -3.85165   AGTTGGCTTCCCTGA             CAGCATTG CTA TAATCCTG             TTTAAATTTACAGTG  51 12
        uvrD 2263539 .. 2263560 +  -7.9  -2.78813   TTCTCTTCACTGTTA           GGGTTGCTG CGGT CAGCCGCCC            ATTGTTGCAATGACA  59 329
CH53_RS09915 NONE
CH53_RS09920 2266395 .. 2266416 +  -8.7  -6.31682   GCAGGATACGCAAAA           CCGAAGTCG ATGT TGGCTTCGG            TTTTTTTTTGCTTTT 100 107
CH53_RS09930 2268830 .. 2268845 +  -3.2  -3.61506   ACCAACATACCGGTT              TGGGCA TCAA TCCCCA               GTTTTTTACGGATCA  50 522
CH53_RS09945 2271006 .. 2271038 + -14.2  -3.32946   GGCGTTAGAAAAGTT     TCAGACACAGGCCGG TTAA CCGGCCTGTG-CAGA      TCTTATAGTTGGGGA 100 49
CH53_RS09950 2272915 .. 2272938 +  -3.8  -3.89055   CTTTCCTGCTAACGC          CTCTGTGGCT TTCC ATTCGCAGAG           TTTATGAGGATCTAT  57 49
CH53_RS09955 2273603 .. 2273614 +  -4.4  -3.27185   CCGGGAGATGATGCC                GGTT GGGT AACC                 ATTTGTTTAAATCAG  52 53
CH53_RS09965 2275447 .. 2275458 +    -3  -2.97825   CACCAGAGGTTAGAA                CATA CCAC TATG                 TATCATGTTGTTGCT  43 28
CH53_RS09970 2276332 .. 2276344 +  -2.6   -3.9122   AACATCGTTGCGCCA                CGGG TTTAT TCCG                TTATTTCAGACCATC  53 92
CH53_RS09985 NONE
CH53_RS09990 NONE
        glpC 2283545 .. 2283565 + -11.1  -3.03441   AGGGTAATACAGGCA            GAGCGCTGA TGA TCCGCGCTC            TGTTGAGGAATACTA  78 50
CH53_RS10010 2285645 .. 2285656 +  -7.2  -3.35679   ATAATTTCTGCTAAT                CCGG TCAA CCGG                 TTGTGGGTCAACGCG  62 271
CH53_RS10025 NONE
CH53_RS10030 2289994 .. 2290006 +  -9.1   -3.1676   TTGCTCCAGTTCTTC                CGCTG ATA CAGCG                TGTTGGTGAGTCTGT  67 417
CH53_RS10045 2292461 .. 2292471 +  -3.2  -2.72511   CCGAGAGGACTAATA                 CGGA TGA TTCG                 CTTTGAACAGGTCAG  43 28
CH53_RS10050 NONE
        ftsX 2294266 .. 2294276 +  -8.2  -3.21872   CAGTGAAATGATAAT                 GCGC CCA GCGC                 TTGAATCTGTTTAAG  65 216
CH53_RS10060 2295292 .. 2295318 + -11.7  -4.56736   ATGGCGTAACATGAA         GGGCGATATTA TTTAT TAATGTCGCCC         TTTTGCTTGTTCGGT  95 106
CH53_RS10070 2297416 .. 2297437 + -10.1  -4.39166   CTTTTACCAACTGCA           TCCCCCCCA TGTT TCGGGGGGA            TTTTCCTCTCTGCAC  90 94
CH53_RS10075 NONE
        livM NONE
        livG 2300488 .. 2300505 +  -2.1  -4.67353   TTTAGGTGAATAACT             TATTTTT AAGT AAAAGTA              TTTTTGGGTAAATAA  64 28
        livF 2301238 .. 2301254 +  -7.9  -5.38054   GCGTTCAGCCTATCT              GGGCGGT TAA ACCGCCA              TTTTTATTTATGAAG  93 16
CH53_RS10125 NONE
CH53_RS10130 NONE
CH53_RS10135 NONE
        ugpC NONE
        ugpQ 2312954 .. 2313010 +  -7.2  -3.84825   ATTTGATATGCCCTC GTCCTTGAAGCTACAGGGGGGTTAGC TTGCT GCCTACCTACCTGTAACTCCAATGAC TTTGATATAAATAAA  71 18
CH53_RS10150 NONE
CH53_RS10155 2315398 .. 2315412 + -11.4  -3.69395   TGTGCTAAATCTTCC               GGCTCG ATG CGAGCC               TTATTGGCTAATGGG  88 325
CH53_RS10165 2318350 .. 2318366 + -10.8  -5.10208   TAATCGTTAAATTCT              GGGCGC ATCTC GCGCCC              TTTTTATTGCCGTTA  93 54
CH53_RS10175 2320579 .. 2320598 + -11.4  -5.93252   CAAACTGTCTGTTAT            CGGGTCAG TCTT CTGGCCCG             TTTTTTATTTTTCCG 100 80
CH53_RS10180 2321504 .. 2321523 +   -10  -4.59853   GATCTTTATAATATT            GAGTCACC ACTG GGTGGCTC             TTTTTAACCGCTTAA  91 66
CH53_RS10185 2323595 .. 2323622 +   -15   -5.4505   ATGACCTTGGGTCTA        TAAACGGTCGGA ATCT TCCGGCCGTTTA         TTTTTTGTTAAACAA 100 178
CH53_RS10190 NONE
CH53_RS10195 2325988 .. 2326009 +  -4.3  -2.82623   ATCAGTGAGTTGAGT           GAGAGCCGC CAAT GCCGCTGTC            TCCTTGTGAGAGAAG  48 75
        ubiE NONE
CH53_RS10205 NONE
        ubiB 2329285 .. 2329297 +  -5.5  -2.76261   AGTTAATAGACTAGA                GCCTG GCT TAGGC                GTTATGTCTGAGTGT  52 63
CH53_RS10215 NONE
CH53_RS10220 NONE
CH53_RS10225 2331207 .. 2331224 +  -9.8  -3.95435   TGCCTTGATATTTTA             GCCGCC CTTTGA GGCGGC              TTCTGTTTTGGAACG  83 54
CH53_RS10230 2332004 .. 2332016 +  -9.1  -3.57106   TGATGAAAACGCCCG                CCGGA TTT TCCGG                TTGGTTTGAGTTAGG  74 4
CH53_RS10235 2333079 .. 2333115 +  -8.8  -2.58677   CTACAAGGATGGTTG    TTGATAAGGTAGGTAC CGAGC GTGCCTACCTTGGCAG    ATATATTATTGCTTT  65 42
CH53_RS10245 2335368 .. 2335379 +  -3.6  -2.82606   GGCAAAGAGACGAAA                CGCT AACC GGCG                 TCGATTTTGTCCTTG  44 20
         fre 2336204 .. 2336227 + -15.4  -2.56011   CAGGTACAGCGGTTA          TAAGGGCCTG TATT CAGGCCCTTA           ATATCTTTCAGATTA  95 100
CH53_RS10265 2341238 .. 2341250 +  -3.3  -3.55447   CGTGACCTGAAGCTG                GCCTG ATG CAGCC                TTATCTAATCCCTAC  50 20
CH53_RS10270 NONE
CH53_RS10275 NONE
CH53_RS10280 2344282 .. 2344303 +  -8.1  -2.94232   GACCAAAGCAGTACA           CATTTGAAC TTCG GTTCGAATG            CTTATTTGCAGAAAG  63 407
CH53_RS10285 2346009 .. 2346020 +  -5.8   -4.7497   ATTGTGTAATAAGGC                CTCG GCAT CGAG                 TTTTTACTGCATCAC  75 121
CH53_RS10290 2346221 .. 2346258 +  -8.7  -3.45839   ACATTATCAACTGAA   TATCTTAAAGATGACTT TAAC GAGTCGTGTTTAAGATA    TTGCTCTTTAACAAT  72 60
CH53_RS10295 2349457 .. 2349467 +  -6.8  -4.78848   GGCTTAACCTTACAA                 CACC AAA GGTG                 TTTTGTGTTTGAGAG  81 10
CH53_RS10300 2349701 .. 2349721 + -10.4  -4.82154   CAAATAAAGCCGAGA            CCCCATGC CAAAA GCGTGGGG            TTTTTGCTATGGGTT  93 43
        murB 2350988 .. 2350999 +  -2.2  -3.96327   TAATGGTGAGGTTAA                TGCT GTGG AGCG                 TTTGTCGTGAAAGAT  51 4
CH53_RS10310 2351978 .. 2351997 +  -9.3   -2.9099   TAATTTAATAATAGA            TGGGAGG CCAAAA CCTCCCA             CTTTAGCTATTTTCT  68 38
CH53_RS10325 2354167 .. 2354177 +  -5.4  -3.14132   TAATCAGTAGGTCCC                 GAGT TCG ACTC                 TTGGTGCCGGCACCA  54 0
CH53_RS10330 2354552 .. 2354569 +  -6.3  -2.84126   CTCTCGATGAAGAGT             GAAGTGGC CAA GCC-CTTC             CTTTCAAGTTTCTGC  55 283
CH53_RS10335 2354696 .. 2354706 +  -3.2  -2.56596   CCCGCTCCAAGATGT                 GCTG ATA TAGC                 TCAGTTGGTAGAGCG  42 32
CH53_RS10340 2354820 .. 2354833 +  -6.7  -2.57468   GTGTTATGGATTCAG               CAAGC ATGC GCTTG                GTTGATGTGGTGAAA  56 74
         tuf 2356089 .. 2356106 + -11.3  -4.93318   CGACATGCGATAAAA             GGGCATC ATTT GATGCCC              TTTTTCTACGTTGTC  95 50
        secE NONE
        nusG 2357274 .. 2357302 + -16.2   -5.2853   TTGATTCTTGTCTTA        GGCGCGAAATTA AAATA TAATTTCGCGCC        TTTTGTTTTTAGATG 100 66
CH53_RS10360 NONE
CH53_RS10365 2358587 .. 2358623 + -14.6  -2.82449   GATATTATCGCTTTA    CGTGGGCGTAAGGTTT GTCTA GAATCTTACGCCCATG    CTTCTGTTGATGGGG  95 50
        rplJ 2359392 .. 2359402 +  -4.6  -3.15663   CGTGATCAGAAAGAA                 GCTG AAG CGGC                 TTAATCGCCCTCACT  51 11
        rplL 2359883 .. 2359908 + -14.1  -4.64766   AACTTATAGGCTGAT         GGCTGGTGACT TTTT AGTCATCAGCC          TTTTTGCGCTGTAGG 100 64
        rpoB 2364224 .. 2364262 +  -4.6  -3.23216   AAGAGTAACTCTTCG  CCAGACGGCAGACTCTT ACAGCC GGGAGTCTGCTGG-TGG   TTCGTACTGGTCACA  51 33
CH53_RS10385 2368585 .. 2368602 + -10.5  -6.31682   TCACCAACGTAAAAA             CCGCTCC TTAC GGGGCGG              TTTTTTTTTGCTTTT 100 53
        nudC 2376143 .. 2376157 +  -3.5  -2.57468   TACGGTGGTGTTATG               TCGCG AACAC CGTGA               GTTAATCTAATCAGA  43 1
        hemE NONE
CH53_RS10435 2378165 .. 2378176 +    -3  -3.03865   GATTTACTTGGCAAG                CATA GGGA TATG                 ATTTAATTTCGGGTA  43 8
CH53_RS10440 2378958 .. 2378971 +  -4.5  -2.72144   GTCCATCGGCATATC               CGTCG CACT CGATG                CTTTGCAAACGATAA  47 165
CH53_RS10445 2379314 .. 2379326 +  -4.7  -4.99043   ATAATAAGCAGGGGG                GTGGC AAA GCCCC                TTTTGTTTATGCAGC  74 57
CH53_RS10450 2380421 .. 2380435 +  -4.2  -2.58812   CAACCAAGTCTGAAC               GCATGC GTA GCATGA               TGGGTTGAGTTTCCG  44 458
CH53_RS21865 2383514 .. 2383544 +  -6.8  -2.85069   CGTAATATGCGCACC       TCGCGTTACCAACC ACC GGTTGCTAACGCAC       TGCTCTTTAACAATT  57 99
CH53_RS10465 2385352 .. 2385375 +  -5.2  -3.81929   TAACGAGCAAATAAG          GCCGGGCTGA GAGA TTAGTCGGGC           TTTAGTACCTTGTTG  61 87
CH53_RS10470 2385515 .. 2385530 +  -2.4  -3.49475   TTTATACCCATAAAC              GTCGCG TGAC TGCGCC               TTGTCTGAGAATGAG  47 74
CH53_RS10475 2385664 .. 2385710 +  -7.5  -3.45839   ACCATATAAAAAAAC TATTTCAAAACGTACTGCGGCC GCAA GGCA-CAGTGTGTTGTGAAATA TTGCTCTTTAACAAT  66 37
CH53_RS10480 2388909 .. 2388919 +  -6.8  -4.78848   GGCTTAACCTTACAA                 CACC AAA GGTG                 TTTTGTGTTTGAGAG  81 10
CH53_RS10485 NONE
CH53_RS10490 NONE
CH53_RS10495 2389394 .. 2389428 + -16.6  -4.50976   CAGGTATCAAATCAA     GTAAAGACCCCATGCT AAA AGCGTGGGGTTTTTGC     TTTTGTGCTATCCGA 100 36
CH53_RS10500 2390765 .. 2390783 +  -4.6  -3.71751   TCTAACTGGTTTGAT             CTCTTTGT TAA ATAAGGAG             TTATCTCTCTTATCT  56 127
CH53_RS10505 2392788 .. 2392800 +  -4.8  -3.36515   AACTCCAATGACTTT                GGGT ATCAC ACCC                TATTTAACCCTACAA  54 146
CH53_RS10510 2394179 .. 2394198 + -13.6  -3.12327   CGCGTGTCTTATCAG            GAGCCTGC ATAT GCAGGCTC             TGTTCCGTATGGCGG  93 57
        aceK 2396308 .. 2396318 +  -5.4  -3.19192   CCAAGAACTGCGCGG                 CGAA AGC TTCG                 TTGGCTTCAATCAAA  52 384
        metH 2408536 .. 2408560 +  -9.3   -5.2112   TTAAGTAAAATGAAA          GGAGATAGCCG TGA TGACTATCTCC          TTTTTTAATGCTCTT  93 56
         pgi 2420100 .. 2420120 + -15.5  -5.47218   GATCCGTGCTTATTA            GCCCCTTAC CTA GTAAGGGGC            TTTTTTTGGCTCGGA 100 62
CH53_RS10585 2420705 .. 2420717 +  -2.6  -4.26351   CCTAAGTCAGCTCAT                CGGG CTTCA CTCG                TTTGTTGCCTTGCTA  57 158
CH53_RS10605 NONE
        lamB 2427794 .. 2427815 + -17.3  -3.99481   GTAACAGTCGTGATG           CAGCCGCCC TTTG GGGCGGCTG            TTCTATTTTGATGCG 100 37
CH53_RS10615 2428935 .. 2428952 + -12.7  -5.76237   TATGGCTAGATGGTT             GGTGCGC TTAG GCGCACC              TTTTTTCTTTGTGTC 100 58
CH53_RS10620 NONE
        ubiA 2430631 .. 2430653 +  -7.7  -5.27335   AAACAGTCAAAAAAA           TGGCCAGAT GATGA ATCCGGCCA           TTTTTGTTTAGCGCA  91 54
CH53_RS10635 NONE
CH53_RS10640 2434404 .. 2434425 + -12.3  -5.24416   ATATTGAACTGATAA           GCCGTTCCT GCTC AGGAGCGGC            TTTTTATTATCGTTA 100 53
CH53_RS10645 2435488 .. 2435509 + -13.1  -3.15544   TGCTAGCCCGCAGGG           TGAGCCTCA AGGG TGAGGCTCA            TTAATCCCGATGAGC  91 393
CH53_RS10655 2437504 .. 2437537 + -11.1  -2.57489   TAGCTACGTTTACTT     ACCCGAATCACTTAC TTGA GTAAATGATTCGGGA      TGCGTTCACTTGCTG  76 55
CH53_RS10660 2438235 .. 2438254 + -10.7  -5.04249   AAGCGTTGTAAAGAA            GGGCTCC CTAATC GGAGCCC             TTTGTTTTTTCAACA  93 253
CH53_RS10670 2440981 .. 2440996 +  -2.5  -3.61715   TAGTTTCCCCTTCGT              CCTTG AAGCTA CAGGG               TTGTTAGCGGCGGTG  50 38
         alr NONE
CH53_RS10680 2443495 .. 2443512 +  -9.9   -5.1517   CGCTAAACTGTTTAA             GGCGATA GAAA TATCGCC              TTTTTGCTTTATTTT  93 98
CH53_RS10685 2444191 .. 2444205 +  -7.8  -3.45571   TGGCCCATCCTTGGG               CCTCGC AAT GTGAGG               TTGCTGTTTGCCAAC  68 90
CH53_RS10695 2448090 .. 2448107 + -10.5  -5.15167   GATTAGGAAAATAAA             GCCCTGC CTTG GCGGGGC              TTTTTGTTGCTGATA  93 70
CH53_RS10710 2450956 .. 2450973 +  -9.9  -5.07652   ACGCGAAGCAAACGA             GTGTGAG GCTA CTCACAC              TTTTGTTTTACGCCA  93 66
CH53_RS10715 2452675 .. 2452704 +  -2.7   -3.4331   AGTTTTTGCTGGCAT       CGGGGTGGTGTTG TCCT CGATGCCGCTGCG        GTTTTTAATAACCCT  46 47
CH53_RS10720 2454533 .. 2454554 + -11.5    -4.053   TTAATACTTTTTAAT           CCGGCTGCC GTTC GGTGGCCGG            TTTATCTAACGTAAT  90 37
CH53_RS10730 NONE
CH53_RS10735 2456806 .. 2456823 +    -7  -2.94412   AATAACCTGCGCCAG             GAACGC TTGGGT GCGTTC              TGATTTCGGGTTAGA  59 127
CH53_RS10760 2462938 .. 2462959 + -15.9  -3.28924   ATTTTAGCTAATAAA           CAACCCGGC ATAG GCCGGGTTG            TTATGACAGAAGCTG 100 59
CH53_RS10770 2465676 .. 2465689 +  -8.1  -2.72463   ACGCCAGGGAATTAC               CGGCT AACT AGCCG                TGCTTGGCAGTAAAT  61 53
CH53_RS10775 NONE
CH53_RS10780 NONE
CH53_RS10785 NONE
CH53_RS10790 NONE
CH53_RS10795 2471507 .. 2471532 +  -6.8  -5.66229   TAGCCGATAAAAAAA         CACCGCGTCA GTGTCA TCGCGCGGTG          TTTTTTATTCTTAAT 100 42
CH53_RS10875 2488236 .. 2488248 +  -5.5  -3.49668   TTACGCCGGTCGTTA                CGCAG AAT CTGTG                TTGTGTGGAGGGTTT  58 165
CH53_RS10880 2489518 .. 2489542 +    -5  -3.40639   TCAGATGAATCGCTA          TCCATCTTAC ATAAG GTAAGAAGGG          TTAGTTCGTCCGATT  54 69
CH53_RS10885 NONE
CH53_RS10890 NONE
CH53_RS10895 NONE
CH53_RS10900 2493143 .. 2493180 +  -2.7  -2.87344   GTGATGATGTAAGAT   TTTCCGCT-GCCATTCGT GCA GCGGATGGCAAGGAGAGA   TGTGTGAGGCGACTG  42 29
CH53_RS10905 NONE
CH53_RS10910 NONE
        tldD 2499356 .. 2499400 + -10.2  -2.92175   TACGGCGTAGGGGTT GTTAGTTGGATGCCCCGTT TAGTTCCC AACGGGGCATCCTA-TAGC TATGGTATATTCAAC  75 31
CH53_RS10925 NONE
CH53_RS10930 2501724 .. 2501735 +  -5.8  -2.79327   TGTTAAGTTGATGCA                TCGC CTGC GCGA                 GTTTGGCTAAGATGA  52 4
CH53_RS10935 2503801 .. 2503822 +  -7.9  -2.75064   TGAAGCAACCTTCCT           CGCCCTCCA TTGA TGGGGGGCA            TCCTTCCCTCAGGAG  62 115
        gabD 2505320 .. 2505333 +  -2.4  -3.98484   ATGGAAGTGAAAACT               TTGC ATTTGG GCAA                TTTATAAATTGGATT  53 5
CH53_RS10945 NONE
CH53_RS10950 2506529 .. 2506541 +  -4.7  -4.26924   CAATTAACTGGATCT                GGCGG CGG CGGCC                TTCTTTCTTGATCTT  64 384
        pmbA 2508299 .. 2508317 + -10.3  -6.11019   TGCTTCACATCTAAA             GCTGGCA TCGGT TGCCAGC             TTTTTTTTGATTTTT 100 49
CH53_RS10965 2508921 .. 2508954 + -16.1  -2.68802   TTAATAATTCCTTTC     ACCCGAATCACTGGC TTGA GTCAGTGATTCGGGA      CTTGTCCGTTTGCTG 100 37
CH53_RS10975 NONE
CH53_RS10980 NONE
CH53_RS10985 NONE
CH53_RS10990 NONE
CH53_RS10995 2512440 .. 2512457 +  -8.5  -3.62096   GATGTCTGGGGTAAA             TATCCAG ATTA CTGGATA              TTTACCCTACTAACC  73 39
CH53_RS11000 NONE
CH53_RS11005 NONE
CH53_RS11010 NONE
CH53_RS11015 2517944 .. 2517961 +  -9.1  -3.53787   ATGCCTTCAATCATT             TCTCCCG GATG CGGGGGA              TTATGCATTTTCATT  71 389
        treR 2522668 .. 2522681 +  -6.7  -3.73775   ATCTTCAACGCAAGT               TGGGA ACGT TCCCA                TTTCATAAAAATCAA  66 155
CH53_RS11040 2524259 .. 2524286 + -15.6  -2.93149   GTCTAAATCGTATTC        CTCCGCCAAAGG TTAT CCTGTGGCGGAG         CTGTTTCTTTAATTT 100 35
CH53_RS11045 2526237 .. 2526252 +  -4.6  -3.69395   AACAACCGCAGTCCT              TCACGC TTAC GCGCGA               TTGTTAGCTGATCGG  57 268
CH53_RS11135 2541837 .. 2541848 +  -4.4  -2.74461   CTGAGCTGTTATACC                CCAA GTGA TTGG                 ATTTACAGGTCGGTA  47 18
CH53_RS11140 NONE
CH53_RS11145 2543270 .. 2543280 +  -3.2  -3.99957   CCTGCAACTCAACAT                 CCTT AAG AGGG                 TTTCTGAATGTTTAA  56 20
CH53_RS11150 NONE
CH53_RS11155 2544298 .. 2544326 +  -9.6  -5.04868   CAAAGATATTCAAAG       GCCCCTG-TGCGT AACA ACGAAACAGGGGC        TTTTCTTTAGTTTCG  93 86
CH53_RS11160 NONE
CH53_RS11165 2546057 .. 2546082 + -12.7  -5.28176   CGCCAGAAAAACAGA         TGCCAGC-CGAT GAT ATCGTGCTGGCA         TTTTTTATGGCTAAA 100 52
CH53_RS11185 2550799 .. 2550817 +  -7.4  -2.55267   ATGCTATTCTGTGGT             GGGCGA TTTTCCT TCGCCC             TAACTTAACATGTTT  59 82
CH53_RS11190 NONE
CH53_RS11195 2551932 .. 2551948 + -13.7  -5.64274   GATTGATGGTAAAAA              CCCGGTG TCT CACCGGG              TTTTTTTATGCCTGA 100 62
        sspA NONE
CH53_RS11205 2553474 .. 2553497 + -16.8  -4.06687   CGTTACCATACCCAT          TAAGGGCGGC ATTA GCCGCCCTTA           TTATTTCTGCCAAAT 100 68
CH53_RS11225 2561970 .. 2561980 +    -4  -4.12198   CCAATCTCTCATTGT                 GATT TGC AATC                 TTTTGCACACTTCTA  59 202
CH53_RS11230 2564669 .. 2564681 +  -6.3  -3.39471   AGCAAATGTAAGCGC                TCTTG TTA CAAGA                TTCATTAAAATTTGT  60 294
CH53_RS11235 NONE
        mtgA 2566274 .. 2566296 +  -8.4  -2.53164   GCCACTAACCTGGCT           GGCAATCTGT GCT GCTGATTGCC           CTTCCTGCTGAGTCA  60 160
CH53_RS11265 NONE
CH53_RS21975 2571565 .. 2571622 +   -13  -4.91285   CTTTAAAAACAATGA GTTGGTGTGTCCCGTC-TGCATTTCAC ATTGA GTGGGATACATGATGGGATACATCAAC TTTTGTTCTCTTCCT 100 43
CH53_RS11270 2572023 .. 2572036 +  -5.9  -5.86976   ACTCATTCCGCAAAA               CCTGC TTCG GCGGG                TTTTTTGTTTTGTGC 100 129
CH53_RS11275 NONE
CH53_RS11280 2575342 .. 2575370 + -12.6   -4.5954   CAACTCCACTCATTC       CACAAAACCCCGC TTCG GCGGGGTTTT-TG        TTTTGTGTGATATGG 100 275
CH53_RS11290 2577858 .. 2577874 +  -3.6  -3.73107   GGGCAAATCAATGAG              CAGCGC ACGCA GCGGTG              TTTCGGCTTTAATCA  52 117
CH53_RS11300 2579898 .. 2579910 +  -6.9  -2.59742   ATAAGTTGAGATAAT                CGCTG ATA CGGCG                CTTATCACACTTGAA  53 370
CH53_RS11360 2589779 .. 2589795 +  -7.2   -2.9356   GAATAACCAATAACA              GGGCCG GTTAG CGGCTC              TGTATAACTCTAACT  61 56
CH53_RS11365 NONE
CH53_RS11370 2592911 .. 2592925 +  -3.6  -5.28176   GTCTTTCTAATAATA               TGAAAC GGT GTTTTA               TTTTTTATGAATAAG  76 48
CH53_RS11375 2594143 .. 2594157 +  -5.6  -3.17051   GCACGGTGATAGTAA               TTGCCG CGC CGGCCA               TGTTAATAGTGGCAC  52 419
CH53_RS11405 2601614 .. 2601639 + -11.1   -4.5774   CCCTACTTGAAGCCG         CAGGGTGTGGT TCAT GCCACCCCCTG          TTTTGCTTATTCCTG  91 101
CH53_RS11440 NONE
CH53_RS11445 2609282 .. 2609303 + -10.3  -3.75665   CATTCTTATACTGAA           TACGTTATC AACT GATAACGTA            TTTAATCGCCTCTGG  80 41
CH53_RS11455 2610346 .. 2610377 +  -2.1  -4.10173   ATCTTGCCAGATTAA      CGGGCGAGGCCGA CGGCTT TCGCCTGTGCCTG       ATTTTTTTTAAGTTG  53 26
CH53_RS11465 2614519 .. 2614545 + -15.2  -5.14477   GTTACAATATGACTT         TCAGGTCAGGGC TTA GCTCTGGCCTGA         TTTTTTGGCTCTGTC 100 49
CH53_RS11470 2615907 .. 2615920 +  -8.1  -3.02471   CTTTTTTCAAGAAAC               CGCTG CCTG CAGCG                TGTGTCTCATCGAAA  63 524
CH53_RS11475 2622682 .. 2622699 +  -9.9  -3.31558   TTAACTAATAAAAAA             GCCAACT CGAA AGTTGGC              TTAATGTACTGATTT  75 391
CH53_RS11500 2628633 .. 2628650 +  -6.9  -2.67694   CAGTCTGAGCGGGGC             TGCGGCG GTGT TGCCGCG              TCATCTCGTGATGCT  56 162
        folB NONE
CH53_RS11520 2631264 .. 2631281 + -11.3  -5.20333   CGAAATATAAAAAAA             GCCCTGA TTAA TCAGGGC              TTTTTGTTATCAGTG 100 176
CH53_RS11535 NONE
CH53_RS11540 2637883 .. 2637913 +  -3.9  -3.76482   GAATAAGATAAAATA      CAGCAGTGCCC-GT GATT ACTGGGTACGGCGG       TTATTCATAGTATGC  54 35
CH53_RS11545 2639732 .. 2639745 +  -6.7  -2.73364   GATAATTCCGATGAG               CTGAC TTGA GTCAG                TGATTCGGGTGAAAG  56 81
CH53_RS11550 2641337 .. 2641350 +  -3.9  -2.74263   TTCGACGTCGTCCCC               GAATT CGCG AATTC                CTTTCGGCATAGACT  44 306
        ribB 2642574 .. 2642612 + -11.9  -3.63515   AACGTGATTTGAACA  CCGGGCTGC-CTTTATTT TCCT GAATAAAGTGTGGCCCGG   TTATTGCCGATAACG  89 76
CH53_RS11565 2643721 .. 2643740 + -12.2  -3.23274   TTGTCAGCAGTCTGA            GGGAAAGC CAGT GCTTTCCC             TTAAATTATGCGCAG  83 182
        nudF NONE
CH53_RS11590 2648932 .. 2648946 +    -5  -3.31461   GCGGTGGCAGTTCCG               GTTTGT TAG ACAGAC               TTATAGCCCTGCCTA  54 17
CH53_RS11595 NONE
CH53_RS11600 2650422 .. 2650439 + -12.7  -3.00022   TTTTAGGGCTAGCGA             CGGCCTG AAAA CAGGCCG              TATATGTGCCATCGA  84 18
CH53_RS11605 2652745 .. 2652771 +  -7.2  -3.09327   GCGGAAGAACAGATT         GCTCTGCGGC GGTTGAA GCCGCAGGGG         TGTTAGCTGCGCTAG  61 297
CH53_RS11620 2654974 .. 2654993 +  -8.6  -2.74012   GCGTTCACTTCTGAG            CC-GCATGC TGT GCATGCTGG            TGATTGCCCTGCTGC  65 92
CH53_RS11625 NONE
CH53_RS11630 2657683 .. 2657694 +  -4.4  -3.92659   AAGCGTTAGCAATGT                TAGC CAAT GCTA                 TTTAGCTTTTCCACC  59 93
CH53_RS11640 2659545 .. 2659555 +  -6.8  -3.51365   AAATGGTTAACCATT                 TGGC TCC GCCA                 TTATCTGGCGTCTGA  64 31
CH53_RS11665 2665015 .. 2665047 + -11.3  -4.03767   GTCGCTAGAAATGAA      TGACCACCCTGGC TTGAGTT GCCGTGGTGGTCA      TTATTATATTATTGG  90 43
CH53_RS11670 2665958 .. 2665968 +  -2.6  -2.79725   CAAGTGGCGGGGAAA                 TAAT GCT ATTA                 GCTTTTTATTGATAG  42 23
CH53_RS11675 2667634 .. 2667659 +  -5.4  -3.09671   AGTGGCTTTAAATGA         TCAGGAAGGC AAATCG GTCTTCCTGC          TCTTCGGCTTGCAAT  54 100
CH53_RS11690 2670666 .. 2670676 +  -2.4  -4.31293   AAAACATCCGGGTCT                 GGCC CGA GGCG                 TTTATTGCTGTCTAA  61 78
CH53_RS11705 2674137 .. 2674155 +   -16  -3.08133   CACAAGTAATAAAAA             CCGGCGCT GTA AGCGCCGG             TTAACTGCATGAGTA 100 58
CH53_RS11720 NONE
CH53_RS11725 2678174 .. 2678203 + -17.1   -2.5742   AAATAGTCTGCAATA       CAGGCGCGGTTGC TGTT GCCGCCGCGCCTG        ATATTAATCTTTCGG 100 35
CH53_RS11795 2691098 .. 2691123 +  -2.5  -4.07568   ATGGGAAGCAAGCCG         GCCATAATAGT AGCG ACAGTCATGGC          TTTTGGCCGCACCCG  55 259
CH53_RS11825 2699567 .. 2699577 +  -6.8  -2.88663   TCGCCCCTTCGGTAT                 CACC AAC GGTG                 TATGTGAAACTGGAT  54 102
CH53_RS11850 2706119 .. 2706155 + -12.3  -4.66938   AATAGTAGAGAACAG    CCACCGGATTGCGCT AATAGCC AGCGCCGTCTGGTGG    TTTTCTATTACCAGT 100 85
CH53_RS11855 2707277 .. 2707304 +  -2.6  -2.79321   TGAAATGGTAAGAAT        TAATGAGCCTCA TCCT TGAGGCTCACCC         TACTGTTACTCTAAG  42 46
CH53_RS11865 2709792 .. 2709832 +    -4   -3.3422   TTATGTTCATCTTTT  CACCGCCCAGTCTA CCCTCGAACCTTC AGGACTGGGTGGTG  CTTTTTAACACGATG  50 41
CH53_RS11875 NONE
CH53_RS11880 NONE
CH53_RS11885 NONE
CH53_RS11890 NONE
        hybD 2717055 .. 2717079 +  -4.9  -3.15544   TTACGCTCAACGTGC          GGGAGCAAGAC CAT GTCTGACTTCC          TTGATGACGCTGGCA  53 6
CH53_RS11900 NONE
        hypA 2717912 .. 2717923 +  -2.2  -2.87881   TGGAATAATCCTGAA                GGAG TGAA TTCC                 TATGTGCACGACTTG  41 33
CH53_RS11910 NONE
CH53_RS11915 2719240 .. 2719256 +  -2.1  -2.54999   CACCGCGGTGAGCGA              GGCACGC GAT GCGTTAC              GTTGATGAGTTTCGT  39 4
CH53_RS11920 2720358 .. 2720401 +  -2.1  -3.11732   TATCGATAACCCTTA GCTGCTGGGGGGAGCTGCG TTCGCT TGCCGCACCTACCTGCAAC TTCAATGACTTTGGG  43 32
CH53_RS11925 2721712 .. 2721725 +  -4.5  -3.30635   CCGAGCTATAAAACA               GGTTG CTGG CAGCC                TTGTGAAGGAGTTTC  52 282
CH53_RS11930 2724169 .. 2724205 +  -4.4  -3.94877   CAGCGGAGGGAAGTC    GCGGTATCGTTGTTGA GTCCA TAAACAACGGTCCCCC    TTCTTGTTCGCCGGT  59 167
CH53_RS11935 2725187 .. 2725211 +  -4.3  -3.92869   TTACCCAGGAAATAA          CCCTGAACT TCATCAC ACTTCAGGG          TTTGTAACTGCCTGA  57 166
CH53_RS11945 2729600 .. 2729612 +  -4.1  -3.36655   CAGCTCAGTGCTGCT                GAGTG ATC CATTC                TTACTCTCTATGTCA  50 20
CH53_RS11950 NONE
CH53_RS11955 2731902 .. 2731927 + -13.5  -3.30619   GTTATTTTTGTTAGT         GTGGCATAAAT ATCT ATTTATGCCAC          TTATAACCAGTAATT  95 40
CH53_RS11960 2733734 .. 2733752 +   -16  -3.81339   CAAATCTGCCTTTGA             CCCTCCCC TAA GGGGAGGG             TTTAGATTATCAGTC 100 123
CH53_RS11965 2734426 .. 2734441 +  -6.8  -5.63517   CCAGAATAATAACAA              CCAGCT TAAC GGCTGG               TTTTTTATTTCCCGC 100 71
CH53_RS11970 2735172 .. 2735187 +  -2.6  -2.96184   TCTGTTTTTATTCCA              CAATGT ATCA ATATTG               CTTTGAATTTTGATC  43 41
CH53_RS11975 2735865 .. 2735881 +  -4.5   -3.7398   TTTAACTTAGCATAG              GGTTTTA CCC TAAAATC              TGTTTTAACTTAACG  56 77
CH53_RS11980 2736476 .. 2736501 + -10.5  -5.37345   GTTATAAGCCATGCA         CGGTACATATC ATCA GGTATGTGCCG          TTTTTTATGGTTAAA 100 47
CH53_RS11985 NONE
CH53_RS11990 2739926 .. 2739957 +  -6.6  -4.71426   CACCTAATAGCCCCA      TGTGCAGACTGCTG GTTT CAATACTCTGCACA       TTTTGTTGATGCAGG  80 193
CH53_RS12000 NONE
CH53_RS12005 NONE
CH53_RS12010 NONE
CH53_RS12015 2745708 .. 2745733 +  -4.7  -4.88388   GTTAAGGTGAAAAAA         CGAGCGTAA CTACATGT TTACGCCCG          TTTTTATCCCGTTAT  74 36
CH53_RS12045 NONE
CH53_RS12050 2756413 .. 2756430 +  -6.3  -3.36581   ATGCTTCATTAATGA             TCGATTG ATAA CAGTCGA              TTAATTAACAATTTA  60 322
CH53_RS12060 2758166 .. 2758177 +  -4.4  -3.51934   ATACCTTGGGCAGCG                GTCA ATAG TGAC                 TCTTTATGAGCGGAA  54 18
CH53_RS12065 NONE
CH53_RS12070 NONE
CH53_RS12075 NONE
CH53_RS12080 2763048 .. 2763074 +    -8  -2.91383   CGAACTGCTTCATTA         GCCGTAGAAAAA GGG TTTTCCTTCGGC         TATATGAATGGCAAT  62 25
CH53_RS12095 2765798 .. 2765823 + -16.9  -3.44553   AACTGATTTTCCTGA         TGGCAGGTGGC TTAA GCCGCCTGCCA          TTGTGACCTTTTTCC 100 35
CH53_RS12100 NONE
CH53_RS12105 NONE
CH53_RS12110 NONE
CH53_RS12115 NONE
CH53_RS12120 NONE
CH53_RS12125 2772411 .. 2772444 +  -8.3  -4.63218   TAACTGATTTAAGTA     TTAACGTGGCAGT AACTCTGG ACTACCACGTTAA      TTTTGTTCGCCAGAA  87 34
CH53_RS12140 2775014 .. 2775027 +  -2.3  -2.69545   TCGCTGGGGGTTTTT               CTTGC AAAC GCCAG                GTTGTGATGTATGAA  40 199
CH53_RS12145 2775847 .. 2775859 +  -7.7  -3.53012   GCTGCTTTTTTTGGC                CGTTG CTG CAACG                TTTCAACCAGCCCAC  68 135
CH53_RS12170 2780532 .. 2780550 +  -2.4  -3.70037   CACAATCTTCGCTCG             GATACTGG GTC TCATTATC             TTTCCCTGATAGTTG  50 402
CH53_RS12210 2788978 .. 2788988 +  -2.6   -3.5594   TTAAAATTTTTCTTA                 TTAA ATT TTAA                 TTTAAACAATAGATT  48 248
CH53_RS12215 2791066 .. 2791083 +  -3.3   -3.3452   TCCGTCAGTGGAGTA             CCGTCAC TAAG GTGTTGG              TTATCGCGTAGTGTG  48 427
CH53_RS12235 NONE
CH53_RS12240 NONE
CH53_RS12245 NONE
CH53_RS12250 NONE
CH53_RS12255 NONE
CH53_RS12260 NONE
CH53_RS12265 2799979 .. 2799990 +  -2.2  -4.49314   GATTCGCGGGCAGCC                TGCT CCTC AGCG                 TTGTTTTTGCTGGTA  61 148
CH53_RS12270 NONE
CH53_RS12275 NONE
CH53_RS12280 2802074 .. 2802084 +  -5.4   -2.8478   AGCTCTACAGCGCTG                 GCTT GCC AAGC                 GTTTGGTGAGGTAAT  52 1
CH53_RS12285 NONE
CH53_RS12290 NONE
CH53_RS12295 NONE
CH53_RS12300 2805913 .. 2805924 +  -4.4  -2.74144   TCATCAAATAAAGTA                TGCA AAGA TGCA                 GTTTGAGGATGAAAA  47 64
CH53_RS12305 2807298 .. 2807321 + -12.4  -3.29947   GGTTTAAGTGCAAAA          GAGTGGCCTG TGAT CTGGCCACTC           TTCGTCTACTGAATA  87 63
CH53_RS12310 2809536 .. 2809548 +  -6.3  -3.06492   GCACATAACCTGATT                TCAGT TTC ACTGA                TGTTAACATCACTAC  56 124
CH53_RS12315 2811248 .. 2811266 +  -3.8  -4.08806   ATTACTGCTTTTCTC             TGATTTGG TTG CCAGCTCA             TTCATTTTTTTATCG  60 503
CH53_RS12340 2817930 .. 2817987 +  -6.3  -3.89572   AACTCAAGTTCTGAT CTTCCCGTCTTCCCCTCTCCTCGGAC TGTATAT GTACAAGGATTAGGGAAGA-GGGAAG TTGTTCTCGTTGGCT  66 361
CH53_RS12355 2822163 .. 2822181 +  -6.7  -5.63504   AGACTGATGTAGTCA             CCTGACT CTTGT GGTCAGG             TTTTTTTATCAACTT 100 213
CH53_RS12360 2823319 .. 2823344 +  -2.6  -4.36914   ACTGATGGGAAAAGT         CCCCC-CAAAA AGCAG TTTTGCGCGGG         TTTTATCAACGAAGA  62 312
CH53_RS12370 NONE
CH53_RS12375 NONE
CH53_RS12380 NONE
CH53_RS12385 NONE
CH53_RS12390 2827800 .. 2827814 +  -7.8  -2.72049   AGGGTGGTTTTAACC               GGTCCC TAC GGGATC               TCATTGAGAGGTATA  61 108
CH53_RS12395 2828135 .. 2828165 +  -7.5  -4.52589   TGGATTAATCGTTGC       TCGCGTGACGCCG TAATC TGACGTCACGCCA       TTTTATCTACCCAGA  81 33
CH53_RS12400 NONE
CH53_RS12405 NONE
CH53_RS12410 NONE
CH53_RS12415 NONE
CH53_RS12420 NONE
        eutA 2834782 .. 2834798 +  -5.9  -2.96452   GTCAAATCACTGGCT              TTTCCTT CTT AAGGGAA              TCTCATTATGAAACT  53 14
CH53_RS12430 NONE
CH53_RS12435 NONE
CH53_RS12440 NONE
CH53_RS12445 NONE
CH53_RS12450 NONE
CH53_RS12455 2839730 .. 2839749 +  -7.8  -3.31196   GTATACAAACAAAAA            CGGACCTC CATG GAGATCCG             TTGATATGAATTTGG  66 54
CH53_RS12490 2849272 .. 2849288 +  -8.7  -3.19246   GCTTTACTTCATGCT              GAAGGGC ATC GTCCTTC              TTACGTTGCGGTTCG  64 394
CH53_RS12505 2851434 .. 2851447 +  -2.4  -2.63079   TCCTGATTGCGGACT               CACT AAAGGA AGTG                TAGCTTATATAGAGA  40 61
CH53_RS12510 2852283 .. 2852311 + -11.2  -5.98781   ATATTTAGATGAAAA        TCACTTCACATG ATATA TATGTGAAGTGA        TTTTTTTTGCTTGTA 100 33
CH53_RS12555 2865139 .. 2865174 +  -8.4   -3.1015   AATAGTAAAAAATAA    TAGATAATATCTGCTC ACAG GTGCAGGTATTAACTA     TCCTTGTGTTTTTTT  68 113
CH53_RS12560 2865781 .. 2865795 +   -10  -2.64155   CTGTCTTATAATTAA               TCACCC GCT GGGTGA               TAGGTTTGCGACCCA  72 26
CH53_RS12565 2866788 .. 2866802 +  -7.2  -2.80291   CAGGGAGCTTTTGCT               CATGAA TTA TTCATG               TATGATGCGCTACTT  60 121
CH53_RS12570 2868720 .. 2868733 +  -3.8  -2.67747   TGGTAGTCAGGGTGA               CCAG AATGAG CTGG                GTTATGGTGTCGGGA  45 430
CH53_RS12575 2870094 .. 2870114 +  -7.6  -2.85565   CTCTCCAATAGCGAT            TCAGGGTG CTTAT CATCCTGA            TGATATTTACAATAT  60 77
CH53_RS12580 2870651 .. 2870675 +  -5.7  -2.60075   CCAAAAACAGAGCAA          CCTGCTGTTGA TGC TCAGCAGTAAG          ATTGATTAAGAAGAG  51 2
CH53_RS12585 2872473 .. 2872491 +    -6  -2.73875   GTGGGCCCTCCTACA             CTTGATGT TCT GCATCGAG             TGATATTAACAAAAG  54 298
CH53_RS12590 2873039 .. 2873062 +  -8.9  -3.51924   AGTTTAGATATTAAA          CTTGCCACT TTAAAC GGTGGCAAG           TTCTCTCAGTAACAG  74 55
CH53_RS12595 NONE
CH53_RS12600 NONE
CH53_RS12605 NONE
CH53_RS12610 2880310 .. 2880324 +  -2.8  -2.91695   GTAGCGAACGATAGT               CCCAAT GAT ATTTGG               TGATTTGACCGTAAG  42 8
CH53_RS12615 NONE
CH53_RS12620 2885426 .. 2885439 +  -2.3  -2.51702   CCCAATGTATTTATA               GGTGG TTAA CCGTC                ATGTTACTCGTATTA  39 17
CH53_RS12625 2886262 .. 2886275 +  -2.3  -4.03806   GAGCTCTACAAGTTA               GGGCT TGAT AGCCA                TTTATAAATTTAATT  53 5
CH53_RS12630 NONE
CH53_RS12635 2887605 .. 2887616 +  -2.2  -5.75342   TTGATCGACGTATAA                TGAG GCGC CTCG                 TTTTTTTTGCCGGAA  84 37
CH53_RS12640 2889192 .. 2889213 +  -5.2  -2.96249   TTGAAAATTTAAATT           CAATGGTG TGTTAT CATCATTG            TGCTTCTTAATACAA  51 519
CH53_RS12650 NONE
CH53_RS12655 2894870 .. 2894883 +  -3.1  -4.59109   CAGTTTAGTTTTTAA               CACTT CATA AGGTG                TTTTTCCACCATGTG  64 52
CH53_RS12685 2900910 .. 2900925 +  -6.1  -4.47183   CCAAAAAGCAAAAAA              CCAGC CGCTAA GCTGG               TTTCTTTAAATAGTG  74 493
CH53_RS12700 2903847 .. 2903892 + -11.3  -2.73542   TACGCCGTAAACTGA GGTATTGTTAGACAGCCGATG AAAG TATCGGCTGTCTAACAAAAAA TCATTACAAATTAGG  79 31
        trmB NONE
CH53_RS12730 2908771 .. 2908788 + -12.7  -4.96501   CAGATAATTAATAAG             GGCGCCT AAGC AGGCGCC              TTTGTTTTTATCGGG 100 57
CH53_RS12735 2909769 .. 2909781 +  -6.2  -2.92111   AGAGCTATTGGCACA                GCGG ATTGG CCGC                TCCATTTTTTAAAAC  55 1
CH53_RS12740 2910592 .. 2910625 + -12.6  -5.03314   CAGGGGGGAGCTAAA     GCAGGTTCAGGT TGTGGGCTTC ACCTGAACCTGC      TTTTTTACGCATCAA 100 63
CH53_RS12775 2916531 .. 2916544 +  -5.3  -3.01712   CAAAGTCTGGGAACA               TCTGT TGCA ACAGA                TCTTGCGCCAGCCCA  51 409
CH53_RS12820 NONE
CH53_RS12825 NONE
CH53_RS12830 2924292 .. 2924306 + -12.8  -4.87626   TTAGTGATAAAAAAA               CCCCGC CAG GCGGGG               TTTTTACTGTTCAGC 100 37
CH53_RS12840 2928807 .. 2928826 + -12.2  -5.27938   GTCTCTCTATATTAA            GGGCAAAC TCAG GTTTGCCC             TTTTTGTTTGCCCCT 100 71
CH53_RS12845 2929260 .. 2929280 +  -6.8  -3.34222   GTAATAAGAGAGTAA            CGCCCG CAAAAATCA CGGGCG            TTATACAGTGATAAT  62 47
CH53_RS12855 2932621 .. 2932636 + -10.4  -5.75945   ATACACCTGTTAAAA              GACCGC TTCG GCGGTC               TTTTTTTTCGCCAAT 100 144
        gapA 2933919 .. 2933935 +  -6.5  -3.50447   TAACGTCTTGTTTTT              CCGTGGT TTT ACTGCGG              TTATATCAGCGTTGA  62 51
CH53_RS12865 2935170 .. 2935189 + -10.6   -3.9373   CAGTAATTTAGATAA            CGGGGGGC GAAA GCCGCCCG             TTTCGCTTTTAGCTA  86 35
CH53_RS12870 2936523 .. 2936536 +  -5.9  -5.72622   TTAACCGACTTAAAA               GGCCT TTCG GGGCC                TTTTTTCTTTGTAAA 100 53
CH53_RS12875 2937675 .. 2937692 + -10.5  -4.77216   CTAGCCATGTCAAAT             CGGGTCG TTAG CGGCCCG              TTTTTCCCTCTTGTT  93 71
CH53_RS12880 NONE
CH53_RS12885 2939526 .. 2939559 +  -2.4  -4.12911   GCCGTTGCAGCAATC     CTGGGGTCAGATTGA TCAAT TCGC-CTGACGCCAG     TTCTTTCTCGATTTG  55 143
CH53_RS12895 2941198 .. 2941233 +  -9.1  -5.58209   TGATCAGTTAATTCT    CTCTCAGGATGAGGT CTGGCC GCTTCATCCTGAAAG     TTTTTTTGCGTTTAA 100 38
CH53_RS12900 2942768 .. 2942794 +    -8  -6.09196   TATTGAATGACTAAA         CACCCGCTATCT ATA AAATATCGGGTG         TTTTTTTATTTTGCA 100 51
CH53_RS12915 NONE
CH53_RS12920 NONE
CH53_RS12925 NONE
CH53_RS12930 2948995 .. 2949010 +  -2.5  -5.08824   ATTAATTGTTAATAA              TGTGC CTCTGT GCGCA               TTTTTTCAGTGGAAA  70 189
        gcvT 2950456 .. 2950474 +  -3.8  -3.26779   TATTCCGAATTATAA             GAGCCTAA ACT TTTGGTTC             TATCTCTTTTAAGGA  48 42
CH53_RS12940 2950970 .. 2950997 +    -4  -2.99251   TTACGCCACTATGAC        CCGAACGACGTG TTTC CCCTTAGTTCGG         CTTTGTGAGTATTTC  47 113
CH53_RS12945 2953997 .. 2954014 + -10.5  -4.43815   TGTGCATGAATCTGA             GGGTCGC GTAT GCGGCCC              TTTTGCTATGTTGAT  90 59
CH53_RS12950 2955106 .. 2955120 +  -6.4  -2.53715   TCGCAAAGCACGCAT               CAGAGG TTT CTTCTG               CTTCATACTCGTCCC  52 290
CH53_RS12960 2956540 .. 2956559 +   -15  -2.74012   CCGCATGCATAAATT            GAGGCCGG ATAA CCGGCCTC             TGGTTCGAATAATGC  95 49
CH53_RS12970 2958178 .. 2958195 +  -3.3  -2.53581   ACACGAAATAAAGCC             CGTGGCC CAGT GGCGATG              TGACTTGCGGGTATC  42 5
CH53_RS12975 NONE
CH53_RS12980 NONE
CH53_RS12985 2960738 .. 2960769 +    -3  -3.18274   CCTATTTAGCGCTAC      CGCTGGAGGCAGC ATGATTG GCTGACTTCA-CG      TTCACTTCACATAGC  44 9
CH53_RS12990 2962276 .. 2962294 + -11.7   -3.6682   CAAGGGATACAGAAG             CGGGCAC ATCAA GTGCCCG             TTTGGCTGACTACAG  89 48
        xerD 2963829 .. 2963847 +  -2.5  -3.08679   CATCCACGCGCATGA             TTGTTTT GAAGA AAAACGA             TGTTGCGTGGAAAGA  43 26
CH53_RS13005 NONE
CH53_RS13010 2966360 .. 2966373 +  -8.1  -2.73681   ATAAAACCCGATGAG               CTGGC TTAG GCCAG                TGATTCGGGTGAATA  61 52
CH53_RS13015 NONE
        lysS 2969308 .. 2969323 + -10.4  -4.72272   CACGGTAATCTATAA              GGGTGC TGTA GCACCC               TTTTTACTAAGCAAA  93 52
CH53_RS13025 2969758 .. 2969770 +  -4.8  -4.00042   CAGTTTCGCTTACCA                CTGG TTCGC CCAG                TTGTTTCATACCAGC  63 259
CH53_RS13040 2973471 .. 2973489 +  -2.4  -4.39166   GTCATACGGCCAGCA             TGCTGTAA CTG TTTCAGTA             TTTTAATATCTGCCG  61 523
CH53_RS13050 2974100 .. 2974128 + -14.7  -3.12142   GTTATCGATGGAAAA        GAAACGGGTTCTG ACA TGGAACCCGTTTC        TATGTTGACTATCAG 100 49
CH53_RS13065 2979690 .. 2979712 + -11.4  -3.66166   AGCATAAATGCTGTT           CAAATCGGGT TAC ATCCGATTTG           TCTCTTTTTTGCCAC  88 356
CH53_RS13070 NONE
CH53_RS13075 2981058 .. 2981084 + -10.2  -3.80595   CTTAATGCGATAGAA        CGGGTTGCGCC CATTTC GGC-CAACCCG         TATTTTGCTCTCTAT  84 36
CH53_RS13085 NONE
CH53_RS13090 2983959 .. 2983982 +  -8.4  -3.97636   ATCAGGTGAGTTTGT          TTTATACATA TATA TATGTATAAA           TTTATCACTTAACAT  79 518
CH53_RS13095 NONE
CH53_RS13100 2985181 .. 2985194 +  -2.5  -3.95567   AACATGTCCATCTGA               TATAT GGCG ATATA                TTTAATAATTTTATT  53 85
CH53_RS13105 NONE
CH53_RS13110 NONE
CH53_RS13115 2989805 .. 2989821 +  -2.3  -3.15292   ATTTCAACCGATATT              GCAAATT AAC AATTTGA              TTACATAATATTTAT  43 1
CH53_RS13120 2990395 .. 2990408 +  -6.7  -3.31248   GGCTATTTTTGCTAT               TGCTG GCGT CAGCA                TTATGAAAAATATTA  62 146
CH53_RS13125 NONE
CH53_RS13130 NONE
CH53_RS21890 NONE
CH53_RS13140 NONE
CH53_RS13145 2993952 .. 2993966 +  -2.1  -2.70121   GAGACTCTAAAGGAA               CGTGA ACTAA TCATG               ATTGATATTTATAGT  40 21
CH53_RS13150 2994827 .. 2994838 +    -3  -3.88232   ATTTCGCTCAACTCT                TTAC ACTT GTAA                 TTGTTATCTACACCA  54 58
CH53_RS13160 NONE
CH53_RS13165 2996538 .. 2996555 +  -3.5  -3.63073   TGTAATATTTGGCGA             GTAATGT TGGT ATATTAC              TTATTGAGAAGTGTA  52 62
CH53_RS13170 2998367 .. 2998378 +  -2.2  -4.11216   AAAGGTGGGGAAGCC                GTGC CCAT GTAC                 TTTTGCCAGTAAGGC  55 142
CH53_RS13185 3000892 .. 3000917 + -11.1  -3.58159   TAACCCTGCTTTCTT         GGCGCTGTAGC GGCA GCTACTGTGCC          TGTTTACCTTTTTCC  82 16
CH53_RS13195 3003406 .. 3003438 +  -8.5  -3.43619   CCAAAAAGTCCTCAG     CCGATAGCC-AGAG ACATAA CTCAAGGCTATCGG      TTACTTGCATTTGAT  70 79
CH53_RS13210 3007523 .. 3007540 + -11.3   -6.5058   TTTTATTTGCACCGA             CCTACGC AGAT GCGTAGG              TTTTTTTTTATTTCT 100 284
CH53_RS13215 NONE
CH53_RS13220 3011080 .. 3011095 + -11.8  -4.93696   TTGTCAGTATTCTAA              GGCCGC ATTA GCGGCC               TTTTTACTATTTGAA 100 85
CH53_RS13230 3012823 .. 3012836 +  -8.1  -3.36878   AAACAGATGATCTGA               CAGCC CAAC GGCTG                TTATCACTGAGTCCA  64 302
CH53_RS13245 3014816 .. 3014830 +    -5   -3.1268   GCTAGTGTGAAACAA               TCAGAG CAT CTTTGA               GTTTTAAGCTTATCG  53 11
CH53_RS13250 NONE
CH53_RS13255 3017702 .. 3017715 +  -2.4  -5.28778   TCACTGGCGACTATT               CCAA TGTGTT TTGG                TTTTTTGTGAGTAAT  73 85
CH53_RS13260 NONE
CH53_RS13265 3019562 .. 3019582 + -14.7  -4.38712   TATCTAATCTTTAGG            CCGGAGCCG CAA TGGCTCCGG            TTTTATACCCGTCAC 100 34
CH53_RS13270 NONE
CH53_RS13275 NONE
CH53_RS13280 NONE
CH53_RS13285 3022056 .. 3022068 +  -6.3  -2.55351   TGCTGAGGCTGTAAA                CAAGA GGA TCTTG                ATTGATGTACAGCCG  54 70
        recC 3025665 .. 3025677 +  -3.3  -3.08211   CCAGAAAGTTGGCTG                CGGCT TTG AGCGG                TAATTTTGAAGGGGT  45 73
CH53_RS13295 NONE
        recB NONE
        recD 3034157 .. 3034180 +  -6.6  -2.84955   TAATTGGTCTGGCAA          GGG-GGCCGCG GTT TGCGACCTCCC          TGTAATGCTCATTAT  57 89
        amiC 3037170 .. 3037183 +  -8.1  -2.94062   GTAGAAACAAAAAAA               CACCC TTAA GGGTG                TCTGATGTTGATATG  63 107
        mltA 3039060 .. 3039075 + -11.8   -4.7219   TTCACTCTTTATCAG              GCGGCC AATT GGCCGC               TTTTGTCTTCATATA 100 79
CH53_RS13340 3040252 .. 3040271 +  -4.2  -3.63744   CATTCTGTTTTAGTG            GTTCCGGT AATG ACGGGAGC             TGTTTTGCCAGCAAA  55 331
CH53_RS13355 3042272 .. 3042284 +  -7.7  -3.00022   AAGTGAAAAAAAACA                GTAGC TTA GCTAC                TATGTCTGGACTACC  63 237
CH53_RS13360 3043481 .. 3043505 +  -2.9  -3.29829   ACCCATTCACGATGG          TAACCCACT ACGATAA AATGGGTTA          TTGTCGGGCGATATA  46 70
CH53_RS13365 NONE
CH53_RS13370 3045182 .. 3045205 + -16.8  -3.05844   AGTATCGCGTTATGT          TCAAGGGGCC GCTC GGCCCCTTGA           TATTAAGGTAACCGA 100 101
CH53_RS13390 3049321 .. 3049351 +  -6.9   -3.8372   GTCGAGCCGGTGTGC       GAGATCTCTCACA CCGGC TGTGAGACATCAC       TTCTATTATTCGACT  69 64
CH53_RS13395 NONE
CH53_RS13400 NONE
CH53_RS13405 3051625 .. 3051643 +  -4.6  -3.33265   TTTAGCGGCAGTTGG             TCAGCTTT TCC AAATCTGA             TTCAATTTCTGAAAT  52 109
CH53_RS13430 3057878 .. 3057898 +   -14  -3.74792   GAAATATGTTGGTTA            GGGGGCCT TTTAT AGGCCCCC            TTTGCGTATCTAATG  95 79
         tsf 3058819 .. 3058842 + -12.4  -4.60143   TCTTAATGCTAAAAA          TGGGGCCGCC AATA GGCGGTTCCA           TTTTATCTACTCTAT 100 35
CH53_RS13440 NONE
         frr 3060532 .. 3060549 +  -6.9  -4.85782   ATTAGCAAAAATAGA             GCGTCGC TTAG GTGGCGC              TTTGTTTTTAGCAGG  84 47
CH53_RS13450 3062049 .. 3062068 +  -8.6  -5.63504   GCTGTCACTTAAGAA            GCCGTG-AC TTG GTACACGGC            TTTTTTTGTGGGCTT 100 160
CH53_RS13455 NONE
        cdsA NONE
CH53_RS13465 3065125 .. 3065148 +  -4.5  -2.52464   CACTTTTCAATGATT          TCTCCCGTC TTTAAC GGCTGGAGA           TAGGTTAGGAAGAAC  47 12
CH53_RS13470 3067620 .. 3067642 +  -8.5  -4.16921   TGAAATAACCTAAGG           TAGCGCTAA TGAGT TTGGCGCTA           TTTTAGGCATTATTC  82 86
CH53_RS13475 NONE
        lpxD 3069441 .. 3069480 +  -7.2  -3.44552   AGAGTTCCTAATTTG CGGCCTGCCTAATGCCTC CCTTTT GGGGCAGT--GCAGGCCG  TGTTGTTGATAGCAT  66 226
CH53_RS13485 NONE
CH53_RS13490 NONE
        lpxB NONE
        rnhB NONE
        dnaE NONE
CH53_RS13510 3077331 .. 3077355 + -15.1  -5.68023   AGAGAAATATTGAAA          TCCGGCTCATA TAT TATGGGCCGGA          TTTTTTTGCTTATAG 100 70
CH53_RS13515 NONE
CH53_RS13520 NONE
        tilS NONE
CH53_RS13530 3082211 .. 3082226 + -11.8  -3.08679   CACCAATAAGTTAGC              GGCGGC AAAG GCCGCC               TGTTCCCTAACGGAG  78 490
CH53_RS13545 NONE
CH53_RS13550 NONE
CH53_RS13555 3084466 .. 3084492 +  -5.3  -4.33675   AGCGCTTGATTTGGC        CCAGCAGGAAATC AAT GATTTC--GCTGG        TTTTAATCATCTGCT  68 121
CH53_RS13590 3091319 .. 3091348 +  -2.9   -3.5393   GAGTGACCAAAGCAG       TACACATTTGAAC TTCG GTTCGAATGCATA        TTTGCAGAAAGTAAT  48 369
CH53_RS13595 3093016 .. 3093039 +  -5.2  -3.81929   TAACGAGCAAATAAG          GCCGGGCTGA GAGA TTAGTCGGGC           TTTAGTACCTTGTTG  61 87
CH53_RS13600 3093179 .. 3093194 +  -2.4  -3.49475   TTTATACCCATAAAC              GTCGCG TGAC TGCGCC               TTGTCTGAGAATGAG  47 74
CH53_RS13605 3093493 .. 3093504 +  -5.8  -3.40403   CTCAAATAATCGCAA                TGCG AATA CGCA                 TTCTGATGAAGAGAG  56 202
CH53_RS13610 3096573 .. 3096583 +  -6.8  -4.78848   GGCTTAACCTTACAA                 CACC AAA GGTG                 TTTTGTGTTTGAGAG  81 10
CH53_RS13615 3096810 .. 3096843 + -16.9   -4.0371   CAGGCATCAAATAAG     CAAAAGAGGCTACCC TAAC GGGTGGCCTTTTTTG      TTTGTCTCGAGAGTA 100 36
CH53_RS13645 3104985 .. 3105009 + -13.6  -5.14163   GCTATAAAGTAAAAA          GGGCGCTGAT GATAA GTCAGCGCCC          TTTTTGTTGCTCGGT 100 126
CH53_RS13680 NONE
CH53_RS13685 3112579 .. 3112590 +  -7.2  -3.15621   TTTGTTTAGTCCCAG                CGGC TTAC GCCG                 TATTCGCTTCCCATT  63 77
CH53_RS13690 NONE
CH53_RS13695 3115450 .. 3115477 +    -2  -3.16093   GGGTTTAACACCCTT        GGGGG-GCA CTTTTGCGCCA TGCTCCCCC        TCGTTTTACCTTTAC  43 33
CH53_RS13710 NONE
CH53_RS13715 NONE
CH53_RS13720 3119741 .. 3119774 +    -6  -3.68827   TTCACTGGCGGCACG     CTGCTCGATTGG GATCGCTGCA CCATTCGGGCAG      TTTGGATCATGGGTG  61 303
CH53_RS13730 3122025 .. 3122045 + -11.2  -5.72254   TGATGAATATAGTAA            CCCCGTAT AAGAA ATACGGGG            TTTTTTATTATTTAA 100 66
CH53_RS13735 3124395 .. 3124406 +  -2.2  -3.56262   TACAAGATGTTTTAG                TGCT TATC GGCA                 TATTTGTCAGATTTA  47 26
CH53_RS13740 NONE
CH53_RS13745 3133329 .. 3133346 +  -8.4  -3.06133   AAGATGATAAAAAAA             GCCTCC TGAAGC GGAGGC              TTGAGTAGACACTTA  67 34
        gmhA 3136650 .. 3136663 +  -2.3  -2.55712   TAAAGCCTGATATGT               CGTGG TGAT CAACG                GTATTATCAATCTCG  39 31
CH53_RS13760 3137720 .. 3137737 +  -2.7  -4.72272   AGTCATACGGAAAGG             GTAGATA CTGA TATCCAC              TTTTTCCTGACCAAA  68 224
CH53_RS13770 NONE
CH53_RS13775 NONE
CH53_RS13780 NONE
CH53_RS13785 NONE
CH53_RS13790 NONE
CH53_RS13795 3144563 .. 3144579 +  -2.2  -3.74713   TATGCTTGATGATTT              TGGCGG CTGAT TTGCCA              TTATTCGGCTTTTTA  49 16
CH53_RS13800 NONE
CH53_RS13805 3145957 .. 3145987 + -12.6   -4.3453   CAAATTTAGACAGAA       CCCCCCAGCCAA CTCAGTA TTGACTGGGGGG       TTTATATTTACACTT 100 109
CH53_RS13815 3148581 .. 3148600 + -11.4   -3.1875   TGTGGTTGAACCCAT            CGGTTGCC TGTA GGCAGCCG             TTGCGTTCGGCTCTC  82 49
CH53_RS13820 3149783 .. 3149803 + -10.4   -3.4678   GCGATCAATAAAAAA           CGGCGG-GC CAAA GCGCCGCCG            TTATCATCTAAAGAT  79 42
CH53_RS13830 3152070 .. 3152099 +  -8.6  -4.38154   GTAATTTAGTTGGCT       TTAAACGCCTGG TCAGTT CCGGGCGTTTCA        TTTTCTCCGCAGTAT  85 37
        frsA NONE
CH53_RS13840 3153928 .. 3153956 +    -9  -4.10612   TAATTAAGCAGAATA        TTCCCCCTTT AGCACAATA AAAGGGGGAA        TTTCTCATTCTGACT  83 60
CH53_RS13845 NONE
CH53_RS13850 3156577 .. 3156611 +  -9.5  -5.06505   TAGAAATATGAACAG    TAAAGCGACATCTGGC TGCT GCT-GATGTCGTTTTA     TTTTTCTCTCTGGTT  93 52
CH53_RS13855 NONE
CH53_RS13860 3159006 .. 3159021 +  -4.7  -4.00042   GCCGCCAAAATTGCC              TGCTC ATATCA GAGCA               TTATTTAATAAAGAA  61 2
CH53_RS13865 3160582 .. 3160594 +  -2.7   -3.6959   CTTACACCTTGAAAT                CTATG AGA TATAG                TTTAAATGATCATAT  50 161
CH53_RS13870 3161762 .. 3161776 +  -5.6  -4.48072   ATTTTTGACAGCATT               CTGCCT GTA AGGCTG               TTTTCTGCTCAATAT  70 311
CH53_RS13875 3170658 .. 3170672 +  -8.6  -2.82327   CCCCAATATTATAAG               CTCCTT ACT AAGGAG               GTTTGCATATGGGAA  66 131
CH53_RS13880 3171199 .. 3171211 +  -4.7  -4.54449   CTTGTGGATTATCCG                CAGCG ACC CGCAG                TTTTATCTCAAATAT  71 289
CH53_RS13890 3172616 .. 3172661 + -10.6  -3.62505   TTGAAATCTATTGAG CCTAAATGTAGACGGCGGTA CTAATA TATCGCTGTCTACATATAAG TATTTATAACTTTTT  83 73
CH53_RS13895 3173165 .. 3173209 +  -5.2  -3.65261   TTTTTTAATCTGACG CTACACTTAGGTTAACAATAG TGAG CCATTGTTAACCTAAGCC-AG TTCATTTCATTATTA  58 100
CH53_RS13900 3173941 .. 3173958 + -11.3  -2.57132   TTACTTGCGCAATAG             CCTCTGG TTTG CCAGAGG              ATTATCAGGCAAAAA  79 68
CH53_RS13905 3175288 .. 3175310 +  -4.9  -3.16742   ACCTACGTAATCATT           TCAGCGTAA CTCAT TTGCGTTGA           TTAATGCCACTTAAG  53 121
CH53_RS13910 3176349 .. 3176366 +  -2.7  -3.61103   GCAACGGATCACGCC             GCCG-TCT TCC AGAATGGC             TTTCAACTCAGCTTC  49 394
CH53_RS13920 3178665 .. 3178675 +  -8.2  -3.59031   TCACTTTAATCTGCA                 CCGG AAT CCGG                 TCTTTCATTGCTTCA  69 482
CH53_RS13935 3184483 .. 3184493 +  -3.2  -3.65991   CTGAGTTTTCAGTGC                 CGGA GAA TTCG                 TTGTGTTAGAACGCT  52 37
        phoR NONE
CH53_RS13945 3187056 .. 3187068 +  -3.3  -2.90194   ACGACTTGCCTTTCT                CCGCT ATA AACGG                TCTACTTAGCGCCGT  44 254
CH53_RS13950 3188604 .. 3188624 +  -9.7  -4.72272   TATAGGATTTTTTTA            GCCACGG CTCATCC CCGTGGC            TTTTTGCTGAAAAAA  93 50
        proY 3190072 .. 3190089 +  -9.1  -5.60864   AAGACCTACTATCAA             GCCGGGA GATT TCTCGGC              TTTTTTTGCTCTATA 100 50
CH53_RS13960 3192207 .. 3192221 +  -8.5  -4.78029   TGATAGCAATTAAAA               GCGGC CAAGC GCCGC               TTTTCCTTTTGTTGA  88 60
CH53_RS13965 3193138 .. 3193163 + -10.5  -3.01637   TAATGAAGTGGTAAA         TTCCCCATCGA TAGG TTGATGGGGGA          TCTCTGCTATTAATC  75 170
        queA 3198558 .. 3198571 +  -3.1  -2.70022   AACATTAGACTGTTT               CTCTA ATGC TGGAG                GTTATGTGAAGTACG  43 78
         tgt 3199727 .. 3199750 +  -2.6   -2.5671   ATTGCCTTTGTATTT          GTAGATC-TAA CAG TTACGATTTAC          CGTTTCTGTTTTATC  41 51
        yajC 3200202 .. 3200230 +  -4.5  -2.89177   CCTTTGTGGAAGTAT        CTGATGCTGATCG TTG TGATCTTCATCGG        TCTGCTATATGCACT  48 83
        secD NONE
CH53_RS14005 3203025 .. 3203057 +   -15  -5.65927   CAGTACGAAAAGCAA      GCCCTGATACTGGT GTATA GCTAGTATCAGGGC      TTTTTTGTTTAAGTC 100 52
CH53_RS14010 3204504 .. 3204516 +  -3.3  -3.20808   TGAATCAAGATAAAC                TGCCG CTT CCGCA                CTTTGTTGTCGTGGC  46 42
CH53_RS14015 NONE
        ribD 3206308 .. 3206321 +  -2.3  -3.01924   AATCCGCCCCCCTGC               GGGGT ATGA ACCCA                TATTGAGGAAAGCTA  42 134
        ribH NONE
        nusB 3207300 .. 3207328 + -16.9  -2.91264   AAGTGAAGAGGGATA        TGATTAAGGCCGG TTC TCGGCCTTAATCA        TATATCGGTAAACAC 100 77
CH53_RS14035 NONE
CH53_RS14040 3209121 .. 3209135 +    -5  -2.60571   TGCAGGTGTGTTGGC               TGCATT CGG GATGCA               CTTACTTGCCGCCTT  49 308
CH53_RS14060 3214391 .. 3214414 +  -7.4  -2.97245   CGCGTAGCTAACCAA          CCCTGCGG-CT TCA AGTCCGAAGGG          TATAGTTATAAATCC  61 191
CH53_RS14075 3216729 .. 3216741 +  -4.8  -3.86524   ATATACAGGTACAAA                GGTG CTGTT CACC                TTTGTACCACAATGT  61 55
CH53_RS14125 3227515 .. 3227536 + -14.5  -3.65996   TAAGTGAGAATTTAG           CAAACGGCC CTTA GGCCGTTTG            TGTTTCTGTGTAGGC 100 106
CH53_RS14130 3229416 .. 3229438 + -15.6  -5.18371   TTTTTGACTGATTAA           GCCCGTAGCC TTT GGTTACGGGC           TTTTCTTTTATAACA 100 272
CH53_RS14135 3230436 .. 3230450 +  -3.5  -4.14627   ATTCCGTGTTCACCC               GTCGT GACTA GCGAC               TTATTTCTGTGAGCC  59 15
        clpX 3231956 .. 3231974 + -13.2  -4.91852   TGGTTAGTATGACAA             TGGGGGAT TTT ATCCCCCA             TTTCTTTTTCCTCGC 100 59
CH53_RS14145 3234505 .. 3234532 +  -8.5  -4.25873   ATTGATAAAACTGAT        GCTGGTAAGTG AAATGC TACTTGCCAGC         TATTTTTTGTGCCGC  82 59
CH53_RS14150 3235170 .. 3235189 +   -10  -5.86332   AAGGTAAGATACAAG            GCGCATCG TTAA TGATGCGC             TTTTTTTTCGCTTAG 100 234
CH53_RS14155 3237373 .. 3237388 +  -8.2  -3.65425   GATGTAACAACGAAA              GGTCGC TTTG GCGGCC               TTTCGCATATCTGAA  70 82
CH53_RS14160 3237944 .. 3237979 +  -8.4  -4.56597   GATGGATAAGCACTG    TGGTCAGGCAGATATC TGTG GGTATTTGTCTGGCTA     TTTTTACCACAAACA  87 52
CH53_RS14165 3238625 .. 3238650 +  -8.3   -4.7254   AATAGCCGGAACAGT         TGCTGAGGAGG TATA CCTCGTCAGTA          TTTTTGGTAAAACAT  88 36
CH53_RS14180 3242529 .. 3242544 +    -9   -5.7946   ATAGCTATTAGCCAA              CCGGAT AACC ATCCGG               TTTTTTTCTTCCAAA 100 168
CH53_RS14190 3244265 .. 3244279 +  -5.6  -2.60763   TAAAACCACTTTTCC               GGGGAA TTC TACCCC               CTTATCGCGTGTAGC  51 51
CH53_RS14195 NONE
CH53_RS14200 3248075 .. 3248106 +  -9.5  -3.10522   AAAATCATTCAACGC      CATGAATCCAGCCG CAACA CGGCTGGC-TCATG      TATCTTAACTGCCCT  73 223
CH53_RS14205 NONE
CH53_RS14210 3249937 .. 3249961 + -14.4  -3.95435   TAATGATGATAACAA          TAGGGGCGAT ATAAC ATCGCCCCTA          TTCTATTTTGAGAAC 100 63
CH53_RS14220 3251708 .. 3251736 + -14.7  -4.41494   TTAATTTGGCAATAG        CGCCACAGGATAG CCA TTATTCTGTGGCG        TTTTCATTAGCGGTA 100 81
CH53_RS14245 NONE
CH53_RS14250 3256499 .. 3256517 +  -2.4  -3.05963   TGTCATTAAAGGAGA             GTTAAATG AAG CGTTTACC             TATTAGCCTGGCGGT  42 49
CH53_RS14255 3257495 .. 3257517 + -14.9  -3.29144   CTTTAACTGAAAAAA           GCCCCGTTG GGCAG CAACGGGGC           TTATCAAAACCATCC 100 138
CH53_RS14280 NONE
CH53_RS14285 3263753 .. 3263764 +    -3   -3.8211   AGCTATTAACGCTCT                GAAA GATT TTTC                 TTATTATGACTCGGG  53 139
CH53_RS14290 3267362 .. 3267383 +  -5.8  -3.34895   AGTGAGTATCACTGA           GGCGACAC TCTGGT GTATCGCC            TTGGTTGAACCTCAG  56 107
CH53_RS14305 3269011 .. 3269027 +  -2.1  -3.14404   TTGAGCGTTTTCGTG              CGCGGGG TAA TCCTTCG              TTGCCTCCTTAATGT  43 83
CH53_RS14310 3269855 .. 3269883 + -16.1  -3.68836   TGCCAGGTATAACAA        TCTGGTGGTCATC AAC GGTGACCGCCAGA        TTATTCGATGAATAT 100 150
CH53_RS14325 NONE
CH53_RS14330 3273718 .. 3273731 +  -2.3  -2.64099   ATGCAATTACCACCA               GGCTT TAAG ATGCC                GTTCTGATGCAAACC  40 5
        recR 3274356 .. 3274368 +  -3.4  -3.60112   TGATCCCATTCTTTA                CTGT GGGCG ACAG                TCTTGTTATTGATTA  50 38
CH53_RS14340 3276425 .. 3276452 + -10.6  -5.28755   AATTGAGTAATAGAA        CGCCTCGGATAG TGCA TTATCTGGGGCG         TTTTTTCATCTGTTT 100 39
         adk 3277454 .. 3277470 + -11.5    -4.208   TGGTAAGATAGCTAA              GGCGGCC TAA GGTCGCC              TTTCTCATTTTACGG  93 48
CH53_RS14350 3278540 .. 3278555 +  -2.6  -3.52717   AATTCGTAATTTTTA              TGTATC GATT GATATA               TTAATTATATGTGAT  48 32
CH53_RS14355 NONE
CH53_RS14360 3281087 .. 3281106 +  -2.2   -3.4914   AATGAGGTGAAAAAA            TAGT-ATGG TTA CCGTTACTA            TATTTACTCCTACTT  47 23
CH53_RS14365 NONE
CH53_RS14370 NONE
CH53_RS14375 3284192 .. 3284210 +  -2.5  -4.25088   GATGTCTATATATAC             TTCTTAT GGGAA ATAAGAG             TTTAATTTATGTTTT  57 10
CH53_RS14380 3285569 .. 3285596 +  -7.6  -4.53036   ATTGAACAATGGATT        GCGCTGGCCGTA ATTA TACCGCCGACGC         TTTTAGTCTTTATCC  81 268
CH53_RS14385 3287361 .. 3287372 +    -3  -2.92653   TTTTTTAAATGTGTT                GATA TTTT TATC                 GTTTATGGAAATAAT  43 66
CH53_RS14390 NONE
CH53_RS14395 NONE
CH53_RS14400 3290921 .. 3290935 +  -6.4  -3.89822   CAAGCGGCGTTCAAA               TCTGCT CCC GGCAGA               TTTGTCACCTCAGTC  66 126
        ushA 3296262 .. 3296295 + -14.7  -2.90615   AAGTAAGGCGTGAAG     CTGGAAGCCTCCATT TGGC AGTGGAGGCTTCTGG      TGATTTGCGCGCGAT  95 35
CH53_RS14435 3301530 .. 3301568 +  -8.9  -2.88231   ACAAGAGACAGTTAG  TTAACTGACAGGCCGCTC AACT GA-CGGCCTGCCGGTCAA   TATGCTACTTATGAT  68 22
CH53_RS14465 NONE
CH53_RS14470 3308776 .. 3308804 + -13.9  -3.00946   GCCCACTTGGGTAAC        CTGGCGTTGCAGT GTG GCTGCAACGCCAA        TGATTTGTGGGGCAG  93 40
        cysS 3313540 .. 3313568 + -12.6  -5.48303   TGCATCTAAAAAAAT       TGCGGTT-CTGGT GCTG ACCAGTAACCGCA        TTTTTTTGCCCTTAT 100 76
CH53_RS14510 3315037 .. 3315052 +    -9  -5.64274   ATTTCGAAGTAAATA              GACGTC AACT GACGTC               TTTTTTTATGCCTGA 100 40
CH53_RS14515 NONE
CH53_RS14520 3316092 .. 3316102 +  -5.4  -2.55446   TCTGGAAACTCACCA                 GACA TAC TGTC                 ATTACTAGGTTTATC  50 86
CH53_RS14525 3316665 .. 3316676 +  -5.8  -5.44119   TGCTGGAGGTCATAA                CTGC AAGG GCAG                 TTTTTTTAACATGCC  89 248
CH53_RS14530 NONE
CH53_RS14535 NONE
CH53_RS14545 3320772 .. 3320785 +  -3.1  -3.41134   AGCATCTCAGTGCCA               C-GCGT AAA ACGCAG               TTCATTGGTCCGTCT  47 418
CH53_RS14555 NONE
CH53_RS14560 3323400 .. 3323412 +  -5.5  -3.42366   TCTCTGCACGTTTTC                TGCAG TAA CTGCG                TTATCCACTTTTGCC  56 18
CH53_RS14565 3324377 .. 3324391 +  -6.4   -2.8805   TCAAAGAAAACGTCC               GCTTCT GGC AGAGGC               TGTGTGAAAACTGCT  55 77
CH53_RS14570 3325732 .. 3325750 +    -3   -3.6422   GGCAAGAACAATGTC             GCTGCGTG CAA CACCGAGC             TCTTTTAGCGCGATC  50 266
CH53_RS14580 NONE
CH53_RS14585 3328796 .. 3328816 +  -9.7  -3.55071   TAAAACCAGTCAGCT            GCCACGC GGCTGTA GCGTGGC            TTTACACACCTATGG  77 220
CH53_RS14605 3332239 .. 3332267 +  -2.5  -3.83262   GGAAAACTTTGCGAT        CTTTGATGTGT ACAATCG ACACATAAGAG        TTGTTATACGGTTTG  52 249
CH53_RS14615 3333502 .. 3333515 +  -2.3  -4.57569   GGCTTCTGGCACCGG               GCTTG AAAG CATGC                TTTTTCCCGCAATAA  63 216
CH53_RS14625 3335812 .. 3335833 +  -7.3    -4.015   TTAATGTTTTATACA           GTTCAACAG GTAA CTGTTGGGC            TTGTTTGATGAGTGC  71 360
CH53_RS14655 3341459 .. 3341487 +  -7.5  -3.51419   ACCTTACTGACAACA        TCGACAAAATGAT GCC ACCACTTTGTCGA        TATTATATTTCGTCC  66 31
CH53_RS14665 3344092 .. 3344104 +  -4.1  -3.37283   TCAAAAATCGAATTT                TATCC TTT GGGTA                TCTTTAGACGGTTTA  50 208
CH53_RS14670 3345361 .. 3345393 +  -2.8  -4.14472   GCCGTAAATTAGCTT     TCAACAGCGGAGACA TGAG TGTCTAC-CTGTTAA      TTTTAAAAGTGTTGA  57 173
CH53_RS14680 3347138 .. 3347161 + -18.2   -5.0925   CATTCTTTTATTGAA          CCCCTGTCGC ATAT GCGACAGGGG           TTTTTCATTTTAAGG 100 61
CH53_RS14685 3347580 .. 3347609 + -13.5  -4.89477   ATCACCCCCCACAAA       CAGGTTCCCCCGG TTTT CCGGTGGGGCCTG        TTTTGTTATTAACCG 100 90
CH53_RS14690 NONE
CH53_RS14695 NONE
CH53_RS14700 NONE
CH53_RS14705 NONE
CH53_RS14710 3349710 .. 3349730 +  -9.7  -4.73108   ATCCCTCTTCCTCGA            CGCCAACAA CAA TAGTTGGCG            TTTTGCTTTTATGGA  93 65
CH53_RS14715 3350965 .. 3350988 +    -6  -3.97042   AATCCATTTCCAGTC          GCG-TTCTGCG GCA CGCATAATCGC          TTTCATTAATGCTAG  69 384
CH53_RS14735 3354310 .. 3354323 +  -2.3  -3.35996   ATGTGGGAATTTCAA               CGCAT TTCA AAGCG                TTCTACATGAAAATC  45 255
CH53_RS14765 3362050 .. 3362080 + -14.9  -2.94924   ACAATAATATAAAGA      GGCGTATG-CCACT CAAC AGTGGACATACGCC       ATTTCTACATAACGG 100 263
CH53_RS14810 3370398 .. 3370426 + -10.5  -3.18264   TTTATGAAACAAAAA        TAACGTCTAATGA ATT TTGTTAGACGTTA        TTAGTAAATAAACCC  75 50
CH53_RS14815 3372231 .. 3372253 +  -9.2  -4.87273   GTGATTGCTATCCAA           CGTCTGGTTG ATT TAATCAGACG           TTTTTATCACATATT  90 42
CH53_RS14820 3372935 .. 3372945 +    -4  -3.46815   TAACGCCCATCTACC                 TCAT CTA ATGA                 CTTTATTTCTTTCCT  52 38
CH53_RS14825 NONE
CH53_RS14830 NONE
CH53_RS14835 3377500 .. 3377511 +    -3  -3.12257   GTCGCACTAAGGTGT                TGTT AGGT AACA                 TGCTGTTTTTTGTGA  44 50
CH53_RS14840 3378679 .. 3378701 + -10.6  -2.89191   GACATAAAATCTTAA           TGAAAAGCCC TAA GGGCCTTTCA           TATATAAGCATCTGC  77 308
CH53_RS14880 NONE
CH53_RS14885 NONE
CH53_RS14890 3390757 .. 3390769 +  -4.8  -3.62224   ATATCCTGAAATCTC                CAGG TAGCT CCTG                TTGTTAGCAAGGTAT  57 486
CH53_RS14900 3392270 .. 3392295 +  -8.9  -3.16774   TTTACAATTCATCAA         GCCCGCCAC CTTTTATA GCGGCGGGC          TATCCTTTTATCTGG  70 56
CH53_RS14920 3397803 .. 3397817 +  -4.2  -3.14564   GTTCACCATCCCTGT               GCTTCA CAA TGGGGC               TTGATGCCGCCATGA  48 7
CH53_RS14925 3398298 .. 3398311 +  -2.4  -3.72576   AACTGAGAGGGTAGC               TGGT AATCAA ACCA                TTTGCTGCGCAGAAG  50 213
CH53_RS14940 NONE
CH53_RS14945 3402251 .. 3402263 +  -3.4  -3.47383   AGTCGATACGGTGCA                CTGT GCAGA ACAG                TCTTCTTGCTGTGCT  50 39
CH53_RS14950 NONE
CH53_RS14955 3404011 .. 3404028 +  -7.1  -2.62263   ACTTAAATATATACC             TTTTGCA ATGT TGCAAAA              TACTGTCACAGCGGT  59 205
CH53_RS14965 NONE
CH53_RS14970 3407715 .. 3407731 +  -3.6  -4.58395   GTGAATAAGGTTTTT              GGTCTC TCTCT GAGCCC              TTTTTGAAGGGTGAA  64 80
CH53_RS15005 3415462 .. 3415489 + -12.8  -2.81784   ATAGGAAGGGTTCTG        TATCCCCCCATC TTGC GATGAGGGGATA         GTCTTATTTGTTGAT  83 67
CH53_RS15020 3418282 .. 3418304 + -10.6  -4.11081   GGCTATTAATAAATA           GCCCCACTTA ATC TAAGTGGGAC           TTTATGCTATTATTT  88 308
CH53_RS15025 3420914 .. 3420932 +  -9.6  -3.30619   AAATCATAGGAAATA             CAAAGCGG TTC TCGCTTTG             TTCTGGCGACTAATT  73 227
CH53_RS15035 3421731 .. 3421752 + -14.5  -3.09516   TGCCTCAATGCTAAA           TAAGCCGCC TGAG GGCGGCTTA            TTCAATCATGGGCAG  95 44
CH53_RS15040 3422688 .. 3422699 +  -3.6  -3.81575   ATTCAAATCCAATAG                CCTG TGTT CGGG                 TTGTCGTTTTTTGCC  54 26
CH53_RS15050 3424881 .. 3424904 + -15.4    -2.567   TCCGGGTAGGCCGGA          CAGCCCCAAA GGCA TTTGGGGCTG           CTTGATGGTGTTGAT  95 142
CH53_RS15060 3425940 .. 3425957 + -12.7  -5.45652   CCATATTTATTAAAA             CCCGCCT CAAT AGGCGGG              TTTTTTATTGGCGGT 100 46
CH53_RS15075 3428756 .. 3428789 + -12.7  -4.80487   AACTAAGTATTTCAG     TAAATTGGCCTGA AAATCTCA TCAGGCCAATTTA      TTTATTTTACTTCTA 100 190
CH53_RS15145 3444037 .. 3444062 + -13.3  -3.29459   ATTTGGGCTAAAAAG         AGACACTCCGC AGTG GCGGAGTGTCA          TTCGATTATTCGCTG  93 46
        ubiF 3457371 .. 3457404 +  -2.5  -4.56597   CGGGTAAGGGGTGAC     GGTGAATT-TGTTCTG CTT TAGGGCGTGATTCACC     TTTTTCAGCCGCGAC  63 365
CH53_RS15275 3467577 .. 3467600 + -15.4  -6.17669   TTTTAGCTGAACCAA          CGGGAAGAGA GCAA TCTCTTCCCG           TTTTTTTGTTTTATT 100 95
CH53_RS15280 3469599 .. 3469616 +  -8.4  -5.27923   ACCAAACAGTATATA             GCGTGG CTTAGT CCACGC              TTTTTTATGCCCTTA  93 56
        chiP NONE
CH53_RS15290 NONE
CH53_RS15295 3474995 .. 3475011 + -10.8  -6.41805   AGTTGATGGTTCTTT              CCCCGG CTAGT CCGGGG              TTTTTTTTTTGCTGA 100 119
CH53_RS15310 3479175 .. 3479189 +    -7  -2.55351   ATGGATTTGTTTTCG               GACGCC CAG GGCGGC               GTTCATCTGCGAACA  56 345
CH53_RS15325 NONE
CH53_RS15330 3491512 .. 3491534 +    -2   -2.8805   AAGCCAAAGCGAGAG          CA-GGAGCC TATGTT GGTTCCATG           TATATCGCGGGTGGT  41 387
CH53_RS15335 3492770 .. 3492805 + -15.4   -2.9039   TAGTTGCTTGTGGTT    AGCGGGGTTGGGGTGT TCGA GCACCACAACCCCGCG     TCTGTAAACTACTCT  95 317
CH53_RS15350 3494131 .. 3494141 +  -2.6  -2.66452   GATTTAAAGGTGAAG                 TAAT GAA ATTA                 GTTGATTATAAAAAT  41 23
CH53_RS15355 3494449 .. 3494472 + -12.4  -4.19735   CCATCGAATAATACA          AATCCCGGCC AACT GGCCGGGATC           TTTGCTTTTAAGCCC 100 30
CH53_RS21900 NONE
CH53_RS15370 3496510 .. 3496529 +   -15  -3.34962   GAACTGATCTTAGAA            TCCCGGCC AATT GGCCGGGA             TTCTAAGATCTAAGC 100 34
CH53_RS15375 3497778 .. 3497790 +  -6.3  -3.02043   AAGCGAATGGCAACT                TGGTT GTA AACCA                TGTTGAACAGCGCTT  56 88
CH53_RS15380 3499592 .. 3499609 + -11.3  -5.00616   ATAACCGGTAAGAAA             TAGCGCC TATT GGCGCTA              TTTTTTCGCCAGAAG  95 43
CH53_RS15420 3509116 .. 3509139 + -13.9  -4.84527   GTCGTAAAATTAATG          GCCCGTGAG CAAACA CTCACGGGC           TTTTTACTGTCTGCG 100 73
CH53_RS15425 NONE
CH53_RS15430 NONE
CH53_RS15435 NONE
CH53_RS15440 3513310 .. 3513334 +  -5.2   -3.5754   ATCCTTATTAAAAAA         CG-CTAAAAAA TGCA TTTTTTAGGCG          TTAATTTCAGTATTT  56 266
CH53_RS15445 NONE
CH53_RS15450 NONE
CH53_RS15455 NONE
CH53_RS15460 NONE
CH53_RS15465 NONE
CH53_RS15470 3518355 .. 3518376 + -10.1  -2.82516   TTTATCTATAAAAAA           ACGCCACCT TCAC AGGTGGCGC            TCTCATCATAAACAG  73 41
CH53_RS15480 NONE
        sdhD NONE
        sdhA 3522844 .. 3522861 +    -2  -3.27382   CATTCCCGCCGAAAG             TGCGTT CTTATT AATGCA              TGTGTTGTGTTGAGA  45 12
        sdhB 3523727 .. 3523748 + -12.3  -3.34895   ATGTGAGTTTATTAG           CCCGGGGAA TGTA TTTCCCGGG            TTGCTTCAAGGTAGG  87 125
CH53_RS15500 NONE
CH53_RS15505 NONE
        sucC NONE
CH53_RS15515 3530198 .. 3530215 + -12.7  -5.48825   CTAACTCAAGATAGA             GGCCACC TTGC GGTGGCC              TTTTTTTGCCTAATC 100 69
CH53_RS15525 NONE
CH53_RS15530 NONE
CH53_RS15535 NONE
CH53_RS15540 3535906 .. 3535927 + -13.1  -4.36586   GAACACAATCTATCC           TTATGGGCC ATTC GGCCCATAA            TTATTTTCGTTCTAT 100 64
CH53_RS15545 NONE
CH53_RS15550 NONE
CH53_RS15555 3537549 .. 3537593 +  -3.5  -4.42235   ACCGATATAAATTTG CGTTGATACTGGTTGGATTGA GAG TCACTCCAGCCAGTAGATACC TTGTTTTTAGCAGTT  62 31
CH53_RS15560 3538853 .. 3538869 +  -2.3  -3.21914   GGGGGATGACTTTGT              TAATCAA CCG TGGATTA              TGTAGTTTTGTTTGC  43 54
        tolB NONE
CH53_RS15570 NONE
CH53_RS15575 3541622 .. 3541656 + -17.4  -3.55444   TTTAGCCATTTTCGA     GTCCAGGAATTGGTCA TAT TGACTAATTTCTGGAC     TTTGGCGAGTGAAGA 100 36
CH53_RS15580 NONE
CH53_RS15585 NONE
CH53_RS15590 NONE
CH53_RS15595 NONE
CH53_RS15600 NONE
CH53_RS15605 3544680 .. 3544695 +  -8.2  -2.93723   TGATGGTGGTGGTGC              CCGCCG CTAC TGGCGG               TGTGATTAATACCAC  63 110
CH53_RS15625 3550783 .. 3550808 +  -7.6   -5.2112   GCGGGCAAATAAAAA         CCCCCG-GCAT TGATC ATGTACGGGGG         TTTTTTAATGGTGTT  90 47
CH53_RS15680 3560922 .. 3560956 + -12.3  -4.88067   TTCTTAATCTGATTT    C-AGAATGCCCGGCGT ACTA ACGCTGGGCATTTTCG     TTTTTATCCCTCAAT 100 34
        modA NONE
        modB NONE
        modC 3563661 .. 3563677 + -10.8   -5.1287   CACCCGGCGGTAAAA              CGCCCG TCAGT CGGGCG              TTTTTTCACTATCAA  93 60
CH53_RS15705 3566372 .. 3566384 +  -4.1  -3.87869   AAGCAACCCGCATCA                CCATT ACT GATGG                TTTCTGCCACCTTAC  57 522
CH53_RS15715 NONE
CH53_RS15720 NONE
CH53_RS15725 NONE
CH53_RS15730 3571073 .. 3571101 +  -5.3  -5.53991   CTACGATATGGCGCT        AAAGGGCTAATAG ACA TTATTAGCCCTGG        TTTTTTTGCTGAGTA  90 60
CH53_RS15740 3574987 .. 3575006 +  -6.4  -2.72471   GTTTATCGCAATATC            GTGATGCT TATT AGCCTCAC             ATTGTGTGGTGGCCG  54 22
CH53_RS15745 3575882 .. 3575895 +  -3.8  -2.52987   CAACAACATCTCTTG               TGGC ATTTTC GCCA                GTTGGTCGATATTCA  44 457
        moaA NONE
        moaC NONE
        moaD 3578544 .. 3578560 +  -9.3  -3.21218   GAAGTGGCGTTCTTC              CCGCCGG TGA CCGGAGG              TTGATAATGGACCAT  70 5
CH53_RS15770 3579112 .. 3579131 +  -3.5  -3.08961   CTTAAAAAGTCGGTG            GGCTGTC AATTTA GATGGCC             TGTATCATTATTTAT  45 118
CH53_RS15775 3579938 .. 3579982 + -12.8  -5.21709   TGCTCGAAATGCTCA TTGACCGATGTCAACTGCGC TTTCT GCGCTGCGGGCGTCGGTCAA TTTTTTGGTCTCGCC 100 88
CH53_RS15805 3587762 .. 3587778 + -10.1  -5.90981   CTTTCGCTGATCAAA              CCGCTTC TTT GAGGCGG              TTTTTTTTCATCTGA 100 51
CH53_RS15810 3588947 .. 3588963 +  -9.5  -3.00298   GCGTTTATAGTGTGC              CTGCATT TTA AATGCAG              TATCTCGTTAGGCGA  72 132
CH53_RS15815 3590248 .. 3590261 +  -9.5  -3.96148   GGCTGACAATGAAAA               GGCCG CGTG CGGCC                TTTCTGATAAACGGC  83 43
        pbpG 3592032 .. 3592057 + -10.6  -2.74012   AGTATTCGAATGGCA         GAATTTGCAG TCAGAC CTGCAAATTC          TGCTTAACGTACTGG  76 52
CH53_RS15835 3595269 .. 3595287 +  -3.8  -3.35542   CATTTACCGCAAACC             CACGGGAA AAT TTTCAGTG             CTTTTTCCCGATAAC  50 350
CH53_RS15845 3596843 .. 3596855 +  -3.4  -4.71828   GTTGAACTTAGCTGG                TCTG ATTTG CAGA                TTTTGTTAATCGGGT  67 46
CH53_RS15850 3597314 .. 3597341 +  -9.2  -2.80307   TTGAGTAAAATATAA        GAAAGGTGGCTA TTTT TTGTCACCTTTC         TCTCATAAAACTTTC  68 62
CH53_RS15855 NONE
CH53_RS15860 3599247 .. 3599268 + -10.9  -3.70007   GCGGATAAAACAAAA           TAGCTCTGG CTTG CCGGAGCTA            TTGCTTTTAGGTGGT  83 50
CH53_RS15865 NONE
CH53_RS15870 3601102 .. 3601115 +  -2.3   -3.3363   AAATATTTAATTTAT               CGTGG TCTT CCAAG                TTGCCTTATTATTGG  45 67
CH53_RS15875 3601818 .. 3601842 + -12.9  -3.28041   TTATTAATAACAAAA          CAGGAGTGGCA ATT TGGCACTCCTG          TTCCTCGTTAAAATT  93 75
CH53_RS15880 3603394 .. 3603421 +  -6.3  -4.13963   CAGTAACGATGACTC        TCCAGGGCCAG GTTTTG TTGGTTCTGGA         TCTTTTTTGCCACAT  71 35
CH53_RS15885 NONE
CH53_RS15890 3606162 .. 3606175 +  -3.9  -3.14132   TACGGAACAACTGAT               TTATC CCGA GATAA                TTGCTCAAGAACCCG  48 54
CH53_RS15895 3607028 .. 3607064 +  -4.3  -4.16837   CTTCGGGGGATTGCG    CCTTGATTCATAGCGGC TGC GCCACTGTGACTCGGTG    TTGTTTCTCCTTCTA  63 87
CH53_RS15900 3608125 .. 3608141 +  -4.4  -3.70919   CGGCCAAGGCGCAGA             CCAG-GC CGAG GCTCTGG              TTCTTGGGCTTTAAA  55 316
CH53_RS15910 NONE
CH53_RS15915 3611578 .. 3611594 +  -2.3  -2.95298   CTCGGCTTAAACACT              TAGCTAT CAA ATGGTTA              TGTATCATAGATACC  42 174
CH53_RS15920 3612806 .. 3612818 +  -6.3  -2.79183   GTCAGCCGCTATTAC                GGTAA AAG TTACC                TGTCATGGAGATGGA  55 100
CH53_RS15925 NONE
CH53_RS15930 NONE
CH53_RS15935 NONE
CH53_RS15940 3617098 .. 3617111 +  -8.1  -3.30007   CTTACGTGATAACAA               CCCTG ACGT CAGGG                TTATCGACCCCTGTT  64 479
CH53_RS15950 3618774 .. 3618802 +  -8.9  -4.28188   AATCTGTTCACTGAA        TGAAACAACCATG TTA CATGGTTGATGCA        TTTATATTCTGAATA  85 250
CH53_RS15965 3621780 .. 3621804 +  -3.5  -3.58269   TTAATGGTCGCAGTG          CCTGAAATAGG GGT CATATTACGGG          TTTCAGCATAGGTTG  50 462
        dinG 3625183 .. 3625200 +  -6.3  -3.23219   AATGGCGGATTATTG             GTTAGCG GCAA CGTTAAC              TGTTATCGACATGTT  58 186
CH53_RS15980 3625950 .. 3625985 + -12.6  -3.54543   AGCCACTGTGATTTA    CCTGTCACTGCTGCAA GTTG TTCCGGCAGTGGCGGG     TTTCACCCGCTAGCT  90 30
CH53_RS15985 3627246 .. 3627259 +  -4.5   -3.0318   TGGCAATACCCACCA               C-CCGC TCT GCGGCG               ATTTATGCTATCTTA  49 171
CH53_RS15990 3628407 .. 3628421 +  -5.7  -3.08679   TATTCTTTTCTTCGT               CCTTG AGGCG CAAGG               TGTTGGCTGCGCGCA  53 162
CH53_RS16030 3634594 .. 3634611 +  -4.1  -3.86244   GTTAGACAATCATAT             GTAGGCA GAGT TTCCTAC              TATTTATTGTTATAA  57 66
        ompX 3635256 .. 3635271 +  -6.8  -5.45726   TGTGTCTGATAAAAA              TCCGCT TTCG GGCGGA               TTTTTTTCGCCTGTC  93 77
CH53_RS16045 NONE
CH53_RS16050 3638963 .. 3638977 + -11.4  -4.08767   AGGTTATTTATTTAA               GGGGCT AAT AGCCCC               TTTTAGGGGCATCAA  90 63
CH53_RS16055 3640780 .. 3640798 + -13.2  -5.78622   TGTGTTGATAAGAGA             GCTGATGC ATT GCATCAGC             TTTTTTTTGCGCTAA 100 52
CH53_RS16070 3643594 .. 3643643 +  -5.8  -3.91798   TCTAGACGACAAGGG GAGGCGAGCACATGGTCAGCG AAATCCTGG TGCTGACCAT-TGATCGTCAC TTTCGTTACCGATTG  63 36
CH53_RS16075 3645263 .. 3645294 + -10.2  -2.94199   GAAACCTACATTAAT      TGCTGAAGCCATGT ACCA ATGTGGCTTCAGCC       TGTGGTTGCTAAATA  75 44
CH53_RS16120 3656018 .. 3656033 +    -4  -4.06384   GGAGCAAAATCCGAA              CGTGAT CTAC ATCATG               TTTATGCTGTTCGGA  59 149
        folE 3656745 .. 3656756 +  -5.8  -4.07885   AGCTAACGTCGCAAC                GGCT AATT AGCC                 TTTTCAGAGAGGGTG  65 35
CH53_RS16130 NONE
CH53_RS16135 3659210 .. 3659229 +  -7.2  -3.61398   TGTAACCGTTTTCAA            TCTGTGAG AAAA TTCACAGA             TTCTTAACAACGGCC  66 58
CH53_RS16140 3660590 .. 3660632 + -12.1   -4.7629   AGCAGTAATTATTAA CCTTCTGGCCCCGATATTGG GTGA CCAGCATTGGGGC-GGAAGG TTTTTGCATTGATCC 100 91
CH53_RS16145 3662227 .. 3662238 +  -4.4  -2.98719   TGAAATATTACGTCT                TGCA TCCT TGCA                 TCTCTAATCTAGTCG  49 7
        mglC 3663300 .. 3663329 + -12.2   -3.7697   TGTGAATTAACGTAA       CAGCCAGTCAGGG ATAAA CCC-GGCTGGCTG       TTCTGTTATGGGTGT  89 49
CH53_RS16160 3667299 .. 3667325 +  -5.1  -2.58544   GTTCACTGACTGAGA        CCCG-CGTGATA ACTT TACCGCGACGGG         ATTCTACCCATACCA  48 470
        hypA NONE
CH53_RS16235 NONE
CH53_RS16240 NONE
CH53_RS16285 3693802 .. 3693828 + -10.1  -4.28656   TCGAGTGATAAAAAA        TGCCGG-CTGGG TTTC CCCTGACCGGCA         TTTTGGCTATTGCCT  89 33
CH53_RS16295 3697469 .. 3697481 +  -9.1  -4.05033   ATTGCCGCGCTCGAA                GCACG TTA CGTGC                TTTGTCTCCCCTCAC  83 266
CH53_RS16300 3698165 .. 3698176 +  -2.2   -3.0516   AGTTCTTTGAGTAAT                GTTC GTCT GGAC                 CTTTGCTTCTTAATA  42 27
CH53_RS16305 3698835 .. 3698847 +  -4.1    -3.695   ATAAAGACTAGCCAT                TTCTC GCT GAGAG                TTTAGCCTGTTTGGA  54 30
CH53_RS16310 3700746 .. 3700796 +  -7.7  -3.57572   TAAGCTTTAATTTAA TGAC-CTATTACCTCCGATAGGCG TGGC TGTTTATCGGGGGCAATAGCGGCA TATTGTTATGTATTT  68 31
        dcuC 3702416 .. 3702434 + -14.6  -4.08394   TATTGCGACAAAAAA             GCCGGGTA GAT TACCCGGC             TTTTGCACCAAATCT 100 49
        cpsB 3705937 .. 3705949 +  -3.3   -2.5934   ATTATTCGAGTTAAA                GACCA TTA TGGCC                GTTGCTGATTTAGAG  43 5
CH53_RS16330 NONE
CH53_RS16335 NONE
CH53_RS16340 NONE
CH53_RS16345 3710709 .. 3710721 +  -4.9  -2.90982   TGTTTATAAGAAATA                TATAG GCT CTATA                TGTGTAAAAATTTAT  50 21
CH53_RS16350 NONE
CH53_RS16355 NONE
CH53_RS16360 NONE
CH53_RS16365 NONE
CH53_RS16370 NONE
CH53_RS16375 3715560 .. 3715571 +    -3  -2.96216   TCAACTTGATAACCA                CTTA TAAA TAAG                 TATCTACTAATGAAA  43 19
CH53_RS16380 NONE
CH53_RS16385 NONE
CH53_RS16390 NONE
CH53_RS16395 NONE
CH53_RS16400 3720275 .. 3720287 +  -4.9  -3.74056   TAAAGGAATAATAAG                TAATC ATA GATTA                TTTGACTAATTATTA  58 176
CH53_RS16405 NONE
CH53_RS16410 3722225 .. 3722241 +  -8.7  -5.76633   CAGCAGCAATGAAAA              GCAATCC ATG GGGTTGC              TTTTTTTGTATATAA 100 49
CH53_RS16415 3724060 .. 3724084 + -13.6  -5.55664   TTGCCTTAATAAAAA          CGCCCTCGAT GCTGA GTCGAGGGCG          TTTTTTTGCTGATAA 100 223
CH53_RS16460 3732986 .. 3732998 +  -4.7  -2.54896   GAAACCGATATACGC                CGCCG CTA CGGCA                TCCATTAGGTAGCCA  46 391
CH53_RS16475 3736766 .. 3736791 +  -9.8  -5.54192   ATACGCGCCATGCAA         TAACCGACGT TTAAAC GCGTCGGTTA          TTTTTTTGCATTCAT 100 135
CH53_RS16480 NONE
CH53_RS16485 3738532 .. 3738549 + -12.7  -4.68724   AATTGCTGACTAAAA             CGGAGCC TGAT GGCTCCG              TTTTCTATTGGATAA 100 59
CH53_RS16495 NONE
CH53_RS16500 3742107 .. 3742127 + -12.6  -5.10933   CGCTATTAAGAGAAA            GGCTGGCA TTAAT TGCCAGCC            TTTTCTTTTGGCTAA 100 70
CH53_RS16640 3767889 .. 3767916 +  -7.8  -3.80461   ATAAAGCAACATGGA        TTTCCTCATCTG ATAC TGGGTGAGGAAA         TTTCGTGATCCATTC  73 37
CH53_RS16645 3769128 .. 3769143 +  -2.6  -4.14422   GTATAAAATAAATAA              TGACAA TTTT TTGTTA               TGTTTTTATATATGA  57 117
CH53_RS16650 NONE
CH53_RS16655 3772163 .. 3772177 +  -3.5  -3.53811   TTGCCCTGATTCGTC               TGCTG CTGGT CGGCA               TTTAACAAGGATAAC  50 6
        cbiC NONE
        cbiD NONE
CH53_RS16670 NONE
CH53_RS16675 NONE
        cbiF NONE
CH53_RS16685 NONE
        cbiH 3777705 .. 3777721 +  -5.1  -2.57881   CACGGGGCTATTCAT              TGTGATG AGC CATCACC              CTTATCCACCGATTC  49 21
CH53_RS16695 NONE
CH53_RS16700 NONE
CH53_RS16705 3780040 .. 3780052 +  -6.3  -2.75975   CAGTGATTTAATCAA                TAACG GAT CGTTA                AGTTTTTTAACCGAT  55 41
CH53_RS16710 NONE
CH53_RS16715 NONE
CH53_RS16720 3781769 .. 3781781 +  -5.5  -2.95073   TCAGGGTGATTTCCA                CCTGT AAG GCAGG                ATTTGATGTTAGCCA  53 19
        cbiO NONE
CH53_RS16730 NONE
        cobU NONE
        cobS 3785412 .. 3785441 +  -4.2    -4.015   TAGTGTTTTTGCTGG       CGCTGTTGTAGC TGCTTT GCAATGACGGCG        TTATTTCCTGAATAA  59 15
CH53_RS16745 NONE
        cobT 3787187 .. 3787197 +  -4.6  -3.28041   TCCTTGAAATTACAG                 GGGG TGT TCCC                 TTCGTCCTTGAAGTT  52 34
CH53_RS16755 3788366 .. 3788390 +  -2.9  -3.53012   CAATCACCGACAGCG          GTATCAGAT ACACATA ACCTGATAC          TTTGGCCGGAGAGAG  49 150
CH53_RS16765 NONE
CH53_RS16770 3791679 .. 3791693 +  -8.5  -5.67967   TGGAATAGAAAAAAA               CCGCC AGGTA GGCGG               TTTTTTTGTGCTGGT 100 85
CH53_RS16780 3795007 .. 3795033 +  -6.4  -2.63584   AAATGATGTGCAATA         GCGATGCCAGGC AGC GCTCGGTAACGC         ACTTTTATCTTAAGT  54 121
CH53_RS16785 3796255 .. 3796274 +  -6.4  -3.63341   ATTCAAAGAAAGCGA            TAAACGCG TAAC CGCGATTA             TTCTTGCGGCCTGTT  64 15
CH53_RS16795 NONE
CH53_RS16800 3799491 .. 3799522 +  -7.4  -5.46657   TGATGTGAGCAAGGA      GGGAGAGTGTATTA GCAA TAATCTATTCTCCC       TTTTTTATTGGAGTC  93 46
CH53_RS16805 3800349 .. 3800361 +  -4.1  -3.55603   TCAACTCTGGCCGGT                GTGAT GGA ATCGC                CTTTTGTTTCATGAA  52 22
CH53_RS16810 3801327 .. 3801342 +  -4.6  -5.18561   ACGAGAGCTAAAAAA              GCCACC TTGT GGTGAC               TTTTTTACATCTTTA  80 162
CH53_RS16820 3803695 .. 3803706 +  -4.4  -5.24129   CATGATACTTGATCC                TGAC ATTC GTCA                 TTTTTTCTAAACCCC  80 189
CH53_RS16825 3805028 .. 3805038 +  -6.8  -2.82623   CAAAGACTGTTAATC                 GCCA GAT TGGC                 TGCTTGTAGAAAGAA  57 28
CH53_RS16830 3806662 .. 3806695 + -11.7  -3.61468   GTTGGCTGCCTTCTC     TCCCCAGTCATTGGC GTTA GTCAACGCCTGGGGA      TTCGTTTAGTTGCCA  89 70
CH53_RS16835 3808144 .. 3808162 + -13.2  -3.06183   AGTCTTTTATCCCTG             CTGGCTGA TGG TCAGCCAG             TTGCGTAACGGTCAG  91 69
CH53_RS16840 NONE
CH53_RS16845 NONE
CH53_RS16850 3811111 .. 3811130 + -11.4  -5.36364   GGGTAACCCGCAGCA            GCAGGCGG TTCG CCGTCTGC             TTTTTGTGTTTTTAG 100 160
CH53_RS16855 NONE
CH53_RS16860 3814602 .. 3814618 +  -2.3  -2.94422   TTTCCTTGGTGATAA              GAAAC AAACTGC GTTTC              CTATTTTTCACGATG  42 29
CH53_RS16865 3815049 .. 3815078 +  -2.2  -2.92215   AGCCATCCATCGCCA       GCAAAATTTAAC GATAAA GATAGGTTTTGC        CTGTTTTGTACTTGA  42 15
CH53_RS16870 NONE
CH53_RS16875 NONE
CH53_RS16880 NONE
CH53_RS16885 NONE
CH53_RS16890 3821988 .. 3822003 +  -3.9  -3.65224   GGGGGGATTTTTTCA              GCCCT TCTGAT GGGGC               TTATTGGGATGGCAT  54 196
CH53_RS16895 NONE
CH53_RS16900 NONE
CH53_RS16905 NONE
CH53_RS16910 NONE
CH53_RS16915 3830171 .. 3830189 +  -2.4  -2.62184   TCATGGGATGACACT             TTTACCCT TGA AGGATAAG             TAATATGCCCCAGCC  40 4
CH53_RS16920 NONE
CH53_RS16925 3832381 .. 3832402 + -13.1  -4.62772   ATAAAATGCAAAAAA           GCAGACGTT TGTA AACGTCTGC            TTTCTTTAATTTGGC 100 347
CH53_RS16960 3839819 .. 3839839 +  -4.7  -2.73441   TGAGTGTGTGTTTTC            CCGTTGG CTCATCT CCAATGG            ATTTACGCGATAGTC  46 502
CH53_RS17020 NONE
CH53_RS17025 NONE
CH53_RS17030 NONE
CH53_RS17035 NONE
CH53_RS17040 NONE
CH53_RS17045 3861173 .. 3861186 +  -3.1  -3.10245   ATTGAACCAGTAACA               GCTAT AGGA GTAGC                TCTATGTTGAAGTCG  46 2
CH53_RS17050 3862668 .. 3862696 + -10.2  -2.88398   ATGACGAGCTAACCA        TGAGAAGGGCCG GTCAG CGGCCCGACTCA        TAATTATCGGTTTAT  73 40
CH53_RS17070 3866799 .. 3866810 +  -2.2  -3.55254   TATTGCTTACTAAGT                TGGG CCTA TCCA                 CTTTTTGTAATAATG  47 28
CH53_RS17075 NONE
CH53_RS17080 3869844 .. 3869865 +  -8.7  -4.42788   TTTTAAATGCCAAAA           GCAGGCG-CC TGT GGACGTCTGC           TTTTCTAAAGTTGGC  85 189
CH53_RS17095 3874161 .. 3874172 +  -2.2  -4.60487   CTTCTCAAGTGCGGC                CAGG ATAG CTTG                 TTTTTCAACCTGCTC  63 389
CH53_RS17110 3877625 .. 3877639 +  -5.6  -3.37354   GGGTGGTCAGGGCCC               GCACTG TGG CAGAGC               TTATCAATAAATATC  56 1
CH53_RS17115 NONE
CH53_RS17120 3879275 .. 3879292 + -11.3  -2.80859   ATTTGTGGCAGTATG             CGCCTAC CAGG GTAGGCG              TGATGTATATTTTGA  80 483
CH53_RS17130 3883047 .. 3883060 +  -5.3  -2.76291   CTAGAAGCAGCAGAG               GCATT GTTG AATGC                TCCATTTTAAGATTA  50 106
CH53_RS17135 NONE
CH53_RS17140 3884270 .. 3884291 +  -7.9  -5.01732   AACTTCCCGCCTGTT           CGGGGCTGG TGAA CCAACCTCG            TTTTTTACAAGCATT  88 98
CH53_RS17145 NONE
CH53_RS17150 NONE
CH53_RS17155 NONE
CH53_RS17160 3885701 .. 3885716 +    -4   -3.1203   AAATGACAGTGAATC              GTCATT GATA AATGGC               TATATTCCCTCGTTG  48 18
CH53_RS17165 3886101 .. 3886123 +  -3.6  -2.62616   TATGTTGATGTTTTA           TTTTTTTTAT GCT ATAAAAATAA           TAATGTAGAAAGTAA  43 103
CH53_RS17170 3886363 .. 3886380 +  -9.8  -5.06414   ATTACTTTTTTATAA             GGCCCC TTCGTT GGGGCC              TTTTTGTTAAGGAGA  93 42
CH53_RS17175 3887095 .. 3887109 +    -5  -3.31144   TGAAAAACTAATGTT               TTCCTT TAT AAGGAG               TTATAAAGATGGACC  54 63
CH53_RS17180 3887450 .. 3887487 + -17.3  -3.21747   TTACTCTGATCTTTA   TCTGGCATATATTGAGT TAAT ACTCGGTATATGCCAGA    TTAATCATGAACTAA 100 46
CH53_RS17195 NONE
CH53_RS17200 3891784 .. 3891800 +  -8.7  -2.79276   TCTATTTATAAATAG              CTAGTGC GCA GCACTGG              TCATTGCTCGATAGT  66 156
CH53_RS17205 NONE
CH53_RS17210 3894263 .. 3894285 +    -2  -4.02302   GCCTAAAAATAAATG           TTTTTTGTAG GCT CTACATCAAA           TATTTTTAATCTAAC  53 76
CH53_RS17220 NONE
CH53_RS17225 3896148 .. 3896176 +  -6.9  -5.52384   TTTAATTATGTAAAG        GAGCTATATTT ATATATA AAATATGGCTC        TTTTTTTAATCGAAA  93 47
CH53_RS17230 3897583 .. 3897602 +    -5  -3.08776   TTACCTGATACGCTG            CCACAG AACTCTGC CTGTGG             TGATTTTGGGACATT  49 219
CH53_RS17240 3898505 .. 3898534 +  -9.5  -2.55019   ACTTATAATAACATA       TCCGGCTTGTA-TA TCT TACTACAAGTCGGA       GTGGTTTTTAAAGTT  70 33
CH53_RS17245 3899369 .. 3899391 +  -6.2  -4.55295   CGCTTATCGTGATCA           GCATCCACTG AAA CAGGGGATGG           TTTCTTTCTGGCCCA  75 397
CH53_RS17265 NONE
CH53_RS17270 3903990 .. 3904023 + -15.5  -3.61398   TTCACGTCTGAACAT     CTCTCCGGCTTAAAA CTTG TTTTAGGCTGGAGAG      TTGTTGAGCAAACCC 100 47
CH53_RS17290 3908300 .. 3908321 + -10.9  -5.95539   CGTTAGTGATTGATC           TAAGGCCAC ATAT GTGGCCTTG            TTTTTTTATTTACAA 100 28
CH53_RS17315 3913495 .. 3913512 +  -3.4  -3.05522   TGATACGGAGTTCGA             CGGTAT GGCTGA GTACCG              GTTTTCCACCACTTG  45 38
CH53_RS17320 3914372 .. 3914390 +  -3.2  -3.44527   ATAATCTAATCTACA             TGGTTA TTTTTGT TAACCA             TTATGATGATCAATG  50 428
CH53_RS17325 3915511 .. 3915527 +  -9.4  -3.56006   TATCTGTTACCCCAT              GGGAGC TTAAT GCTCCC              TGTTTCATTCGCTCT  77 95
CH53_RS17330 3916323 .. 3916349 +  -2.3  -4.67982   AAATATAATTAATCA        GTGTTTCTCTGT ATCC ACAGGG-GGCAC         TTTTATTAAATGGCC  64 47
CH53_RS17335 NONE
CH53_RS17340 NONE
CH53_RS17345 3921127 .. 3921148 + -10.1  -3.32993   TGCAGTCACAAAAAA           GACGGCACA GTGA TGCGCCGTC            TTACTCTATCAATAC  77 207
CH53_RS17355 3924420 .. 3924453 +  -8.9  -3.15574   TATTTAAATAGCGCT     TGTCCGGTTGGCAGT GATT AATGTCAGCCGGATA      TATTACTGGAGTTAA  70 34
CH53_RS17385 3928953 .. 3928976 +  -6.7  -3.32963   AAAAACATCCCAAAG          TACGGCTAC GAGATA GCAGCCGTA           TTGTCAGCTAAACCT  62 64
CH53_RS17400 3934068 .. 3934081 +  -9.5  -5.42514   CTGATTATAAAAAAA               CCCGC TAAG GCGGG                TTTTTTACTTTCTGC 100 52
CH53_RS17405 3934520 .. 3934550 + -14.1  -4.39568   GAGTAATGCAAAAAA      CCGGAGG-AAGGTG AGTG CGCCTTGCCTCCGG       TTTTGCTATCTAACT 100 67
CH53_RS17415 3938226 .. 3938239 +  -5.3  -3.13475   CCGGAGTTAACCAAA               TTAGC TGCT GCTAA                TTAAATATAAAATTA  53 139
CH53_RS17420 3941111 .. 3941134 + -13.9  -3.96449   TATTGATATAACAGT          TTCCGGGGC GAGTTG GCCCCGGAA           TTATTTCGACTATTC 100 98
CH53_RS17435 NONE
CH53_RS17440 3944753 .. 3944768 +    -4   -4.8622   GCGCAGTTTGAGTTT              CTTTGA GTTG TCAGAG               TTTTTGGTTGCAGCA  71 30
CH53_RS17445 NONE
        motB NONE
CH53_RS17455 NONE
CH53_RS17460 3949698 .. 3949718 +  -4.8  -2.85351   CGGTTGATATTCGTT           CA-GTGATC AGGT GATCACATG            TCTCATATCAACCGA  50 68
CH53_RS17465 3951703 .. 3951715 +  -6.3  -4.07568   AAGTGAGTGACAAAT                TGGTT GTA AACCA                TTTTGAACAGCGCCA  69 92
CH53_RS17470 NONE
CH53_RS17475 NONE
CH53_RS17480 3955517 .. 3955548 +  -3.1    -2.768   AGCAGTGTGTGCTCA     CCCGAATCA-CTGAC TTGT GTCAGCTCAT-CGGG      ATTCGTTTACTTGCT  44 63
CH53_RS17485 NONE
CH53_RS17490 3956719 .. 3956748 + -12.9  -4.09117   GCTGTGGGTCATAAT       TGGCAGGTGAGGG GGAT CTCTCATCTGCCG        TTATTTCTCGCTGCA 100 45
        flhB NONE
CH53_RS17500 NONE
CH53_RS17505 3961110 .. 3961120 +  -8.2  -3.10796   CCCATACAGTGACTG                 CCCG TGG CGGG                 TATTCAATACTGCCA  64 432
CH53_RS17525 NONE
        flgC NONE
        flgD 3964468 .. 3964482 +  -2.9  -2.76249   TTTTAAAGATAGCGA               TTGAT ATACC ATCAA               TGCTTAAGGTCTTTA  42 114
        flgE NONE
        flgF 3966614 .. 3966630 +  -4.5  -2.52464   CGCAGAGGAATAAAC              TGATGAT CCG ATCATTA              TGGATTGCCAAAACC  47 50
        flgG 3967456 .. 3967471 +  -5.4  -3.06261   ATAATGAGTATCTGA              GGCCGAC TGT GT-GGCC              TCTTACCGGTTACAG  53 83
CH53_RS17555 NONE
        flgI NONE
        flgJ 3970364 .. 3970377 +  -4.5  -3.12999   TAATTTACCAAGTCA               TGGTG TACG CACCG                TTGCCTGTGCGCTGG  51 101
        flgK 3972268 .. 3972295 +  -7.8  -3.79874   CGCGGTTAATTTTTT        GTCAGCGGCAG AGAGTAC CTGCCGCT-AC        TTATCTTATCTAGCG  73 32
        flgL 3973442 .. 3973482 +  -3.2  -6.09888   CCGGGTGCACTTTTT  GGTATGTCATCTTCTTCC ACTAA GGTTTGGGGTGACATACC  TTTTTTTTGTTACCA 100 95
CH53_RS17645 3985881 .. 3985892 +  -2.2  -3.82218   GTTGAGTAATAATCA                CC-GC AAA GCTGG                TTTGATGATGTAACT  52 350
CH53_RS17655 3987095 .. 3987110 + -10.4  -3.14881   AGCTTAACTATTACT              GGGGCA GAAA TGCCCC               TTAATCAAAAGGTTC  75 34
CH53_RS17660 NONE
CH53_RS17665 NONE
CH53_RS21910 NONE
CH53_RS17680 3992945 .. 3992958 +  -9.5  -5.64304   CTAATTAACTAATGA               CCCGC TTCG GCGGG                TTTTTTATTGTCTTA 100 33
CH53_RS17685 3995557 .. 3995574 +  -4.2  -3.03829   ACATCGCATACAAGA             GCAATT TTTAGT AATTGC              TGATTATTTCAATGG  47 94
CH53_RS21915 3997835 .. 3997845 +  -5.4  -3.40522   TAACGGCGGCGGTAG                 CGTT CAA AACG                 TTCTCGTGGCAGCGT  54 310
CH53_RS17725 4006951 .. 4006966 + -11.8   -5.1244   ACCACATTATGTCAA              CCCCGC TGCG GCGGGG               TTTTTATATTACTCA 100 53
        fliA NONE
CH53_RS17735 4008603 .. 4008626 + -13.8   -3.1886   AGTCATTATTTTACG          CCCGGCAAGG TTCC CCGTGCCGGG           TTAATACCCTTCACT  93 120
CH53_RS17740 4009952 .. 4009970 +  -5.2  -3.47751   TTGTTTGCTTACCAT             CCACGGGT GTA ACCTTTGG             TTATGGCTTATTCCG  56 14
CH53_RS17745 NONE
CH53_RS17750 NONE
CH53_RS17755 4012344 .. 4012362 + -14.6  -3.22113   AAACCTATTGAAGTA             TGGGGGCA TTT TGCCCCCA             ATTTTATCAAGCAAT 100 66
CH53_RS17770 4019414 .. 4019434 + -15.5  -6.15828   CGTTTGCTTAATATC            GCCTCCTGT TAC ACAGGAGGC            TTTTTTTTTGCTGGA 100 73
CH53_RS17775 NONE
CH53_RS17780 NONE
CH53_RS17785 4023035 .. 4023054 + -10.7  -6.09888   AATGAGCAAATGAGA            GCACCGC TTTTAT GCGGTGC             TTTTTTTTATTACCA 100 49
CH53_RS17800 4025247 .. 4025264 +  -3.3  -2.93073   TCGAAAGCGCAACTG             GTGGCCA CCTA TAGCCGC              TAATTATTAACCCAA  45 5
CH53_RS17805 4026392 .. 4026404 +  -3.3  -4.13767   ATGGATTTTTTATGC                AACGC CGG GCGTC                TTTTGCGATACACCA  58 317
CH53_RS17815 4028376 .. 4028395 +    -5  -3.59226   AAATATCAACCATGA            TTATCGGC TTGT GCTGGTAA             CTTTATTTTTCTGTG  56 331
CH53_RS17830 4031213 .. 4031230 +  -7.7  -3.71649   CTTGGTTAACCGTTC             TGGAAGG GGTT CCTTCCG              TTTGGCGTTTCCCAA  70 289
CH53_RS17835 4032156 .. 4032177 +  -5.7  -3.17219   CACTTCCGAAAAACT           GTGTTCGCC AGTA GGCGACCCC            TTGCTCCCCCTTATG  55 339
CH53_RS17845 4034255 .. 4034271 +  -6.5  -2.95177   TGACTGGCATGGTCA              GCGCGTT CTG AACCCGC              ATTGATTTTTTCAAC  55 396
CH53_RS17855 4036403 .. 4036422 +  -4.3  -3.07935   AATATAATTGTTGTG            CGTAGTG CTTCGA TACTACG             TTCACTGGCTACAAT  47 215
        sirA NONE
        uvrC NONE
CH53_RS17880 4040809 .. 4040822 +  -2.4  -3.02511   AAGATAGCAAAAGAA               TCAG TAAGTT CTGA                TGTTGCGGGAATAGC  42 152
CH53_RS17885 NONE
CH53_RS17890 NONE
CH53_RS17895 4041173 .. 4041186 +  -9.5  -5.64274   TGAGTATGTCGTTAA               CCGCC GAGA GGCGG                TTTTTTTGTGCCTAA 100 72
CH53_RS17930 4045422 .. 4045436 +   -10  -4.06678   CTAAACGTCCTATTC               CGCAAC TGC GTTGCG               TTTGTGTCAGTCCGT  86 64
CH53_RS17935 4045735 .. 4045745 +  -5.4  -2.88544   TTCAGGGCTGAGTTT                 TCCA AGG TGGA                 TGTATGAGCGTAAAG  52 8
CH53_RS17940 NONE
CH53_RS17945 4047447 .. 4047465 +  -2.5  -4.27483   GGAAGAGAAATACGG            TAGCCAGA TAGT TCTG-CTA             TTTCGTTTTATGGAT  57 102
CH53_RS17950 4047986 .. 4048001 +  -8.2  -5.16681   ATGCAATCAAATAAA              CCTCGC TTCG GCGGGG               TTTTCTTCTTTTTGA  88 82
CH53_RS17955 NONE
CH53_RS17960 4050107 .. 4050126 +  -9.2  -5.72622   CTTCAAAAATGATAA            GCCCCGAC ATAA GTCAGGGC             TTTTTTGTTTGTGGA 100 244
CH53_RS17965 NONE
CH53_RS17970 4051452 .. 4051476 +  -8.6  -3.32647   ACATAATTGCAAATT          GAGAGCCATT CTCAC AACGGCTCTC          TTGATATAATTGAAA  70 35
CH53_RS17980 4052415 .. 4052439 +  -6.3  -4.90471   CACCACCAACAGCAA          GCCACTAGCCT TAT AAGCCGGTGGC          TTTTCTATTTTAGGT  82 47
CH53_RS17985 NONE
CH53_RS17990 4054176 .. 4054198 +    -4  -2.64616   GGGAACGCTTACGAG           TTTTGGCGGC AAT GCCGTCGCGA           TGGTGTACATAAGCG  45 240
CH53_RS17995 NONE
CH53_RS18000 4055172 .. 4055185 +  -9.5  -5.71712   TCAATCCCACATCTA               CCGGC CTAT GCCGG                TTTTTTTATATCCAA 100 48
CH53_RS18005 4055915 .. 4055930 +  -3.2   -2.8194   ATATCTAGGGCAGAA              GTCATC CATC GGTGGC               TGTAATGCCTGATTG  44 33
CH53_RS18010 4056795 .. 4056805 +  -2.4  -3.72527   TGAGAACCCAGATTG                 GCTG GAT CTGC                 TTGTTCGGTAATTTT  49 4
CH53_RS18015 4058228 .. 4058244 +  -6.7  -2.90309   CTATTTCGGCACCTC              TTTCATT GAC AATGAAA              TGATATTCTTTGCCA  54 475
CH53_RS18040 4060214 .. 4060228 +  -3.6  -3.33151   ACACCCTGGAGATTC               TCTAAT GTC ATTGGA               TCTTGATTTCCAGGG  48 21
CH53_RS18045 4061087 .. 4061100 +  -8.1  -4.19258   GGAACTCAAATCAAA               GCCAC GTAA GTGGC                TTTTCAATGAAGTCT  77 115
CH53_RS18050 4061748 .. 4061759 +  -2.2  -3.07629   ACTTTCTGCCAAATT                TTGG TATG CCAG                 TATCTAATTTCATCT  42 248
CH53_RS18055 4063813 .. 4063844 +   -19  -4.29981   TATTACATGAATTAA      TCAAAGGATGACTG TAAA CAGTCATCCTTTGA       TTTTAGATATATTTA 100 517
CH53_RS18070 4065083 .. 4065113 +  -7.6  -3.47431   CAATCCATTCACTAT       CGCCGTCAGT AAAGCCTAGCA ACTGGCGGCG       TTCGTATTTCACTGT  66 88
CH53_RS18085 4066032 .. 4066049 +  -9.8  -4.18197   CTCTTGAATAGCATA             GCCGCC AAGTAA GGCGGC              TTTTGACTGCACGCT  89 84
CH53_RS18090 4066901 .. 4066913 +  -4.7  -5.47399   GGTATGGTATGTTGC                CAGCC AGT GGCAG                TTTTTTTGCGCTTAG  86 184
CH53_RS18150 4079656 .. 4079678 +  -9.8  -4.44448   AAGAAAAATGGTTAA           TAGGCGGGAG CCA TTCCCGCCAA           TTTATTTCCGGTCAT  90 87
CH53_RS18170 4084200 .. 4084212 +  -7.7   -3.6502   TGTTTCCAATCCATT                CATGC CTG GCATG                TTTAAATCCAGCATG  68 476
CH53_RS18180 4086201 .. 4086212 +    -3  -3.19653   CCGATAAATAAGCAA                CATT GAGC AATG                 TTAATCCACTTATAA  44 51
        narZ NONE
        narH NONE
CH53_RS18195 NONE
        narI 4093306 .. 4093323 +  -3.3  -4.07568   GTGTTAGCCAGGATG             TGACTGG CGCA CCGGGCA              TTTTAAACGAGACAG  58 340
CH53_RS18210 4097100 .. 4097128 + -11.1  -5.24129   TAAGACTGACGTCAT       C-AGCGGCATCC CTTAAC GGATGCCGCTTG        TTTTTTATGAAGACA 100 53
CH53_RS18230 NONE
CH53_RS18235 NONE
CH53_RS18240 NONE
CH53_RS18245 4104107 .. 4104136 +  -3.5  -4.63218   GAGCTATCTCGGCTA       TCTCGCTATCGGT GGTG ACTAATTGCGAGG        TTTTATTCACCGCAG  66 289
CH53_RS18260 NONE
CH53_RS18265 4107356 .. 4107368 +  -2.7  -2.75536   TCTTTACGGAGAGTA                TGATG AAG TATCA                ATTTCCACGTGATTT  42 57
CH53_RS18270 NONE
CH53_RS18275 4109218 .. 4109232 +  -2.8   -3.9693   CTTTAAATTAAGGGG               GGATAA GTA TCATCC               TTATTTAAATGAGTA  55 187
CH53_RS18280 4110688 .. 4110703 +  -6.8  -4.56775   TTCCCAATATGAAAT              TGCGGG GCGC TCCGCA               TTTTTAAACAAAAAT  79 233
CH53_RS18285 NONE
CH53_RS18290 4113361 .. 4113387 + -10.9  -5.52023   AATTGATAGCAATGA         CCGCGATGGCT TAAAC AGTTATCGCGG         TTTTTTCTTAATGCT 100 35
CH53_RS18295 NONE
CH53_RS18300 NONE
CH53_RS18305 NONE
CH53_RS18310 NONE
CH53_RS18315 NONE
CH53_RS18320 4118986 .. 4119004 +  -3.1  -3.83323   AATGCTGTACTATAT             GTTGCAT ATTAA ATGCATC             TTTAAGTTATCTGAG  54 137
CH53_RS18325 4120248 .. 4120261 +  -9.5    -3.794   TAGCGGCCCCGTACT               GCGGC AGTC GCCGC                TTTGCTACCTTGGCG  79 374
CH53_RS18335 4121638 .. 4121654 +  -2.1  -3.11732   GCGATAAATTGTATT              GGTTCCG TAC CTGCACC              TTCAATGACTTTAGG  43 44
CH53_RS18340 4123126 .. 4123138 +  -4.7  -4.41241   TTGTCAGGATCCTAT                CCGTG ATA CTCGG                TTTTCTGACAGTTTG  66 218
        hmsH NONE
        pgaB NONE
CH53_RS18355 NONE
        hmsS 4129941 .. 4129973 +  -5.8  -3.01791   TAACACCTCTGAATA     CCTGATAATAAGC-CA TCC TGTGCTTA-TATCGGG     TATTCAGACCCAACT  53 52
CH53_RS18365 4130886 .. 4130900 +  -3.6  -4.67109   ACATTTTAGTTTATT               TAGTTG TAT TAACTA               TATTTTTTTATTTTC  67 57
CH53_RS18370 4132424 .. 4132448 + -12.9  -4.00868   TGACCCGATAAAAAA          GGGCAAGCG CGATAAA CGCTTGCCC          TTTGCTTATCCCTAA 100 59
         cbl 4137515 .. 4137537 + -13.4  -3.05963   CACCTGAACCTCTGT           TCCGCCATCG TCC CGTTGGCGGA           TGTTACAGTCACCAT  86 116
CH53_RS18410 4144002 .. 4144015 +  -5.3  -4.38637   TGAATGCGACCAATC               TGCAT AGTT ATGCA                TTTTAAATTATTGTT  68 367
CH53_RS18415 NONE
CH53_RS18420 NONE
        astD NONE
CH53_RS18430 NONE
CH53_RS18435 4150829 .. 4150844 +  -5.4   -4.5464   GAATTTGCACCATTT              TGGTGC GCAT GCACTA               TTTTGGTTATATGTA  73 475
CH53_RS18440 4152247 .. 4152264 +  -9.8  -5.25805   TAGGTGAATTAAAAA             GGCGGG ATTAAC CCCGCC              TTTTTTGCATTTCTT 100 82
CH53_RS18460 NONE
CH53_RS18465 4157819 .. 4157835 +  -2.3  -3.80511   TAAGAGATAGTTAAT              TTATTGT TTA ACAATGG              TTATTAGTGATTTAT  51 399
CH53_RS18470 4159055 .. 4159096 + -11.9  -3.18383   TTTAATAAGTAGACT GTGCCGTATTTATCA TTGTCATTTATT TGATAAATACGGCAC  TTACTAACTGAACGT  83 153
CH53_RS18475 NONE
CH53_RS18480 4161702 .. 4161748 +  -8.2  -2.71924   AGTCGGCGCGATTAA ACCGGTAGCACT-AACAGC CTATCATTCT GCTGTTGAGTGCTACTGGA GTTTGAGACCAAATC  61 45
CH53_RS18505 4166674 .. 4166697 +  -3.4  -4.87626   GCCTATTGATTATCA          T-TTATGTTAT AGT ATAACATAACA          TTTTTGGTGTTCAAC  70 349
CH53_RS18510 4167425 .. 4167444 + -12.2   -5.1383   TTGCCAATAAGAGAA            GACCATGC ATCT GCATGGTC             TTTTTGTATGTTATT 100 60
CH53_RS18515 4168398 .. 4168415 + -11.3  -4.63107   TACAGAATAAAACAA             GGCTCCT GAAA AGGAGCC              TTTTGCTTATTTGAT  93 58
CH53_RS18525 4170595 .. 4170610 + -10.4  -4.15565   TATGACATAAAAAAA              CCACGC GATC GCGTGG               TTTTAAAGTAATAAC  89 192
CH53_RS18535 4172639 .. 4172649 +  -4.6  -3.64703   ATTAAGGTCTGTTCG                 CTGC TTG GCGG                 TTTACCTAAGACAAA  57 198
CH53_RS18545 4173902 .. 4173927 +  -8.9  -5.42975   ATCAAGAGTAGAAAA         CCCGTTGTCGC ATCT GCTTCAACGGG          TTTTTCTTTATCTGC  95 182
        hemA 4178499 .. 4178509 +  -6.8  -2.75159   ACGCGACAGCCTCGG                 GCTG GAT CAGC                 ATTAGTTTCCTCTAA  57 10
        prfA NONE
CH53_RS18575 NONE
CH53_RS18580 NONE
CH53_RS18585 4181765 .. 4181810 +  -9.3  -2.58236   CACTGATTTCTTTTA TACAGCGGT-TATGTGGCAA TCACATT TTGCCGCATAAATCGTTGTA ATTAATCTCGATTTA  67 35
CH53_RS18590 4182735 .. 4182758 + -13.2  -5.14965   TCTTAATCGAAAAAA          GGCAGTGTAG TTAC CTACGCTGCC           TTTTTTGATACCCGT 100 60
CH53_RS18600 4186209 .. 4186230 + -10.1  -4.27617   AACACAAAAGAAAAA           GGCCCTGAC TTTC GTCAGAGCC            TTTTGCTCGAATATG  89 59
        ghrA 4189109 .. 4189125 +  -5.1  -4.12188   TTGGATATAGTGATA              GCCCT GCAAGTA AGGGC              TTTTAGCGCTGCTGA  63 63
CH53_RS18625 4189983 .. 4189997 +  -8.6  -3.01269   ATTAATACGATAAGA               TGTGAC GTT GTCACA               TATCATTTGAAAGTT  67 46
CH53_RS18630 4190680 .. 4190718 +  -8.3  -2.88054   GTAAACCTCGACGTG  CA-GTCAGTTAGTCAGTC AGTG GGATGACTAACTGGCCTG   GTTTCACTTCTAAAC  66 116
CH53_RS18645 4194321 .. 4194335 +  -2.1  -3.74519   ACTCAGAAGCCTTTT               CTACG GGTGA TGTAG               TTTAATGAAGATCTT  49 11
CH53_RS18655 4197523 .. 4197533 +  -6.8  -5.06451   AAAGTCAAAATAAAA                 CGGA TGT TCCG                 TTTTTTCACATCATC  85 427
CH53_RS21930 4198452 .. 4198485 +  -9.7  -6.02919   TAGTAAAATTTCAAA     GGCTTTTACTGAGAG AGTA TTCTTAGTTAAAGCC      TTTTTTTGTTTGTAG 100 86
CH53_RS18665 4198953 .. 4198964 +    -3  -3.86822   GTATATTAGTGTTTA                CTAT GCTT ATAG                 TTTGTACCCAAATTG  53 96
CH53_RS18670 NONE
CH53_RS18675 NONE
CH53_RS18680 4201529 .. 4201552 + -16.8  -2.61322   ACAATTGGGTAGAAG          CAACGCCTGC TAAT GCAGGCGTTG           ATATTTACGACGTAT 100 183
CH53_RS18685 4203200 .. 4203220 + -11.9   -5.9362   AATAGTTTAGCGAAA            GCCCCGATA ATT TATTGGGGC            TTTTTTTATGTTTTA 100 75
CH53_RS18695 4206278 .. 4206290 +    -2   -4.1648   TTGGCTATTTATTCA                TTCA ATAGA TGAA                TTATTTAATTCTTAT  56 181
CH53_RS18700 4207167 .. 4207195 + -13.8  -4.80959   CTCACCGGCTGTACA        CCGCCCCCGGCT GATTA AATCGGGGGCGG        TTTTATTATGGCTTA 100 56
CH53_RS18730 4213281 .. 4213294 +  -5.3  -2.74488   GAGAATCCCGGAGAG               CTTAC ACCG GTAAG                TGATTCGGATGATTG  49 91
        nudB 4213785 .. 4213800 +  -2.6  -4.06687   TCTTTATTCAAGCTA              GTATTT TTGG AGATAC               TTATTTATGGCAGGT  55 25
CH53_RS18740 4214597 .. 4214617 + -13.3  -3.90048   GTTATGTCATTCTCT            CTGGCCGCA CTA TGTGGCCAG            TGTTTTTAGAGGCAC 100 72
        ruvC 4215388 .. 4215407 +  -6.4  -5.34555   TTAACAGTAATTGTT            GGCTGTAT ATCC ATCCAGCC             TTTTTTGTGCTATAA  87 163
        ruvA NONE
        ruvB 4217119 .. 4217145 +  -8.7  -2.67515   GTAAATTCTTTTGAT        GCAGGGCTGAGC CAAT GC-CAGCCCTGA         TGGTGTGATAATCAG  65 37
        znuA NONE
CH53_RS18780 NONE
CH53_RS18785 4224049 .. 4224071 +  -7.7  -4.82128   ATTAAACATAAAAAA           GCCCGCA TATCTGAGT TGCGGGC           TTTTGTGTTTAATGG  84 55
CH53_RS18800 4228692 .. 4228702 +  -6.8  -3.54935   CGAGAGACAAATCGG                 TCGG GAA CCGA                 TTTAAACAGCATTTA  64 95
CH53_RS18805 4229692 .. 4229708 + -10.1  -5.55855   TCGTAAAGTAATTAA              CCTCTGC CAT GCAGGGG              TTTTGTTTTTTTAGA 100 83
CH53_RS18810 NONE
CH53_RS18815 4231134 .. 4231144 +  -5.4  -3.51232   CATTTCCCCGCGTTC                 TCAC TTT GTGA                 TTAGTTTGAGAGAAG  58 110
CH53_RS18825 4233575 .. 4233596 +  -7.2  -3.14234   GGGAAAAGCGAGGAG           GGGTGTGC TATCAT GCGCGCCC            TGTATTGAATTCATA  63 41
CH53_RS18830 NONE
CH53_RS18835 4235101 .. 4235118 +  -9.1  -5.09895   ACGTAATACATGAAA             GGCGCTG AATT TAGCGCC              TTTTTTACGTGGATA  90 78
CH53_RS18840 4237114 .. 4237143 + -18.7  -3.57674   GCGTCACTCCATTAT       CAACAACGCCGGT CATC GCCGGCGTTGTTG        TGTTTGTCATAGACT 100 48
CH53_RS18845 4238464 .. 4238491 + -14.3  -2.76696   TTAATTAAACGAAAG        TACCCCCTGTA AATAAA TACAGGGGGTA         GTTATTGCGAAGAAA  93 188
CH53_RS18865 4241317 .. 4241341 +   -10  -3.32109   AATATCTATTGATAT          CCCAAGCCTC TCTGC GAGGCTTGCG          TGTTATAATATCTAC  77 29
CH53_RS18870 4241656 .. 4241670 +  -2.8  -2.83073   GCATTTGGGCGAAAC               TAACGT ATA GCGTTG               ATTGTTCATAAAAAT  42 16
CH53_RS18875 NONE
CH53_RS18880 4243644 .. 4243680 +  -8.8  -3.12351   GCATAATCTAAGCGG   CTTTTGCCGCTTAAGCC ATTA GGCT-GGGCGGCAAAAC    TTGCATCTGGCGGCC  68 30
CH53_RS18885 4244226 .. 4244238 +  -3.4  -3.01712   TATCGTAGTCTCTCA                GGTA ACTGA TACC                TATTCAGAAGCCAGA  45 63
CH53_RS18890 4244679 .. 4244696 +  -6.9  -6.02914   ATCGAATTAAAGTGA             GGCTGCC TTCT GGTGGCC              TTTTTTTTGTATGAC 100 51
CH53_RS18895 4245650 .. 4245668 + -10.3  -3.18264   TAAGGCCATTAAAAA             TGGCACC ACATC GGTGCCA             TTGATAGATAAAGAA  75 65
CH53_RS18900 4247749 .. 4247759 +  -2.4  -4.75518   AGTATTTATTAAAGT                 CGAG TTA CACG                 TTTTAGTTTTATCTC  64 9
CH53_RS18905 4250185 .. 4250195 +  -2.6  -2.81768   CAACAAAAATAATAT                 TTTT CTG AAAA                 GTTTGAATGATATCG  42 18
CH53_RS18910 4252272 .. 4252289 +  -5.5  -3.39142   AGAAGTATGTATATA             TGCCTGG TGCG CTAGGCG              TTAATTAAATCTGGG  56 0
CH53_RS18925 4255967 .. 4255983 + -12.3  -4.72272   AATAGTAACGTAAAA              GGGGCAT TAA ATGCCCC              TTTTTCATGGAAAGA 100 56
CH53_RS18935 4259526 .. 4259551 +  -7.6   -2.7556   ATGCGCCGATTGGTC         ATTACAGCCC ACCGCC GGGCTGTAAA          TAGTTGAATACCGTT  60 43
CH53_RS18940 4260946 .. 4260967 +  -7.3  -3.87994   GCAACGGGTAACATG           TACACCAGC CAAT GCTGCTGTA            TTTCTGCCGATAACT  69 313
CH53_RS18970 4271186 .. 4271202 +  -9.4  -4.88736   TTGAGTCATAAAAAA              TGGGGC ATCGC GCCCCA              TTTTTGTGCCTGATG  93 58
CH53_RS18985 4274162 .. 4274175 +  -3.1  -2.52516   TGATGACCAGAATGG               CGAGCA GAT TGC-CG               GTTGATACTCAACGA  42 7
CH53_RS18990 4274547 .. 4274574 +  -9.9  -4.11027   CAAAATTTATCAACA        TTAACGGAGCC GAGTAA GGCTCCGTTGG         TTATGTTTTTACTGC  86 53
CH53_RS19010 4279032 .. 4279064 +   -10  -3.96224   GGCCGTCTTGGGCAG      CGCAGCTTATGC ATTTTGCGG GTATAAGCTGCG      TTTGTGCCTGCTTTG  84 111
CH53_RS19015 NONE
CH53_RS19020 4282219 .. 4282232 +  -3.1  -3.75506   GCCAAGGAGAATAAG               TCATG AGAA CATGG                TTATTGCTGAGTTGT  52 20
CH53_RS19025 4282934 .. 4282973 + -12.9  -3.28712   CTTTGGTCGCGTATT  TGCCAGTGGTAGGCCTG TGCTGC CAGGACTACCACTGCCG   TTATCAGAGGGCGAA  93 448
CH53_RS19040 4285734 .. 4285748 + -11.4  -3.52102   CCTCACCCTTCGGGC               CGCTGC TTC GCAGCG               TTGTCTCGCTACGCT  88 375
CH53_RS19065 4290384 .. 4290398 +  -7.2   -3.0094   CCCTTTGATAAGGGG               TTGATG AAT CATCAA               TGTATGTCCGTAAAG  61 22
CH53_RS19070 4291494 .. 4291506 +  -6.3  -2.89607   TTTAAGGTTGATGCT                TTCAG CCG CTGAA                TAGTTCATGTTTTGA  55 10
CH53_RS19075 4293206 .. 4293242 + -11.8  -2.64099   AGATGATTTTATGTG    TGAGCGCAAAACAAAA TTAGT TTCTGTTTTGTGCTCA    ATTCTCATGCAGAGC  81 51
CH53_RS19090 4295368 .. 4295378 +  -2.4  -4.45068   TTATCCACAAAGGAT                 ACCC CAC GGGA                 TTTCTTATTGAAGCT  59 48
CH53_RS19100 4299894 .. 4299918 +  -8.5  -5.18355   ATCCCGCAGTATGGA          GGCTACCCGTG TGT TACTGGTGGCC          TTTTTCGTTTTTCCA  93 52
CH53_RS19105 4302377 .. 4302410 +  -3.9  -3.58536   AATACATATAGGGCA     TTACATGGC-CGGG TTCGTTC CCCGTGCAATGTGA     TTTAAAGATACCTTT  52 188
CH53_RS19110 4304134 .. 4304161 + -14.2  -5.50723   GCACTAATATATTAA        GGGCAGC-CGCTG CAT CAGCGTGTTGCCC        TTTTTGTTTTGATAA 100 34
        oppB NONE
CH53_RS19120 NONE
        oppD NONE
CH53_RS19130 4308167 .. 4308190 + -12.4  -4.98255   CGCCCAATAGCAAAA          TCCCCGCCAG AGAA CTGACGGGGA           TTTTTGTCATTACAG 100 56
CH53_RS19145 4311991 .. 4312005 +  -4.2  -3.48395   CTTAGGGTGCTTTTG               CTGCGA ATA TCACAG               TTATATGCGGCAGAT  52 68
CH53_RS19150 4312376 .. 4312391 + -10.4  -2.80994   AGCATAAATCAAATA              CGCCTG TGTT CAGGCG               TATGATCACGTTAGG  73 75
CH53_RS19165 4314362 .. 4314386 + -10.8  -5.08824   ACCGTAATAAGAAAA         GGGTCGCTCTT ATGC AAG-GCGACCC          TTTTTTGCGTCAGGA  93 78
CH53_RS19180 4317538 .. 4317564 +   -16  -4.96848   CGAGCATTAGATAAG         CAAAAAGGGCCG TAA TGGCCCTTTTTG         TTTTTATCTGAAGGG 100 48
CH53_RS19195 4319750 .. 4319771 +  -6.5  -3.06915   TTTCTAATTACCCTT           CGCTCTTGC CGCT GCAGGGGTG            TTGGCTGCGCTCACT  56 34
CH53_RS19235 NONE
CH53_RS19240 4329656 .. 4329668 +  -7.7  -3.16191   CGAAAACTGTAGATT                TTCCC CTT GGGAA                TTGGTGACACTGTCA  62 421
CH53_RS19250 4333324 .. 4333345 +  -9.4   -2.9652   GGGTAATTCATCTAA           GGGGGGGA TCCTTT TCTCCCCC            TCATTCATTTTATGC  72 35
CH53_RS19265 4336114 .. 4336132 +   -16  -5.28176   TTTAGTGAAGAAAGG             CAGGGGGC TTA GCCCCCTG             TTTTTTGTGGCTAAA 100 57
CH53_RS19275 4339532 .. 4339548 +  -9.4  -5.80364   GGTACAATAAAAGAA              CCAGCC TCAAT GGCTGG              TTTTTTTATTGGGCT 100 88
        cysB 4340881 .. 4340902 +  -8.7  -4.18018   TATAAAGAAATAAAA           GCCATCTCT TTTT AGTGATGGC            TTTTCCATAACAGAA  82 43
CH53_RS19285 4342167 .. 4342181 +  -2.8  -2.57211   CCTTGTTGGGATGAA               TGCTGT TTT AGAGCA               CTTATAAGAAACAAT  41 183
CH53_RS19290 4344937 .. 4344956 +  -7.8  -4.52143   CTTGTTCAATAAAAA            GGGTGGCT GAGA AACCACCC             TTTATTGTCTTTGAA  82 84
CH53_RS19300 4346840 .. 4346852 +  -3.3  -3.53091   TGGCATAATTCATCA                GGTTG ATT CGGCC                TTTAGGAAAAAACGT  50 175
CH53_RS19305 4347179 .. 4347193 +  -5.8  -2.91656   TCAGCAAGGAATAAT               TTTCTA TGT TAGAAA               TGCTGTTTCTGCTGT  52 27
CH53_RS19310 4348651 .. 4348669 +  -7.4  -4.82901   ATCTTTCGCAGACCT             CAGTACTC AAG GAGAACTG             TTTTTCTAAGGCGGC  83 323
CH53_RS19325 NONE
CH53_RS19330 4351003 .. 4351015 +  -2.7  -2.74605   ACTTACCTAATTAAG                TATAG GCA CTGTA                TCAATTTTAGCCGAA  41 447
        araD 4352115 .. 4352136 +  -5.1  -3.86346   AAGCAAACAAGATAA           CCCGTGT TCAGTCTT GCACGGG            TTTCTCCAGCCATAG  61 65
CH53_RS19355 4354239 .. 4354251 +  -7.7  -3.28041   AAGTATCCACAGGGC                GTGAC AAT GTCAC                TTCATGGTTCGGCTT  66 84
CH53_RS19400 4366209 .. 4366252 + -16.2  -3.56155   TAACTATCTGATGTT GACG-AACTGATGCTCTGCCG CCA TGGCAGAGCGTCAGTTACGTG TGTTTCGTCTTAATC 100 16
CH53_RS19430 NONE
CH53_RS19435 NONE
CH53_RS19440 4378210 .. 4378222 +    -2  -4.09628   AATAACAATTAGCGA                TAGT GGCCG ACTA                TTCTTGTTTAAAATA  53 36
CH53_RS19445 4379955 .. 4379976 + -10.1  -3.24735   CATTTTGTCATAAAA           CTCAGGAGC CGAA GCCCCTGAG            TTGGGTGTTTAAATC  75 249
CH53_RS19460 4384804 .. 4384837 +  -4.6  -2.73771   CTATACCTAACGCCA     TTGGCGTGGCAG CTAACACCCA TTGCCGCGTCAA      GTTTGAAGGGTATAC  47 46
        araG 4386498 .. 4386509 +  -7.2  -3.48064   ATATTACTACTGATG                CCGC GCCT GCGG                 TTGCTTGATTATGAA  66 6
        araH NONE
CH53_RS19475 NONE
CH53_RS19480 4389914 .. 4389926 +  -5.5  -2.58544   GTAGCCAGCAGATTT                GCACG CTG TGTGC                CTTGTGAGGCTCAGG  51 105
CH53_RS19485 4391068 .. 4391094 +  -9.4  -4.33808   GCTGGCAATAAAAAA         CGCCCGTACTTC TAT GAAATACAGGCG         TTTTCCGTTAATTTC  90 50
CH53_RS19500 4395384 .. 4395395 +  -3.6  -5.08824   GTTTAGAATATGCAT                GGCG GCAA TGCC                 TTTTTTACATCCGAG  75 191
CH53_RS19520 4400350 .. 4400387 +  -3.3  -3.67597   ACCGCCGGTATTGAT   CCGCCGAGGGTCAGCAT GATC ATGCTTGATCTTGGGGG    TTATTCACTGACGCC  52 7
        fumC 4405829 .. 4405849 + -10.4  -5.03314   CAAACAAACGATTAA            CGCCGGTC CTTAT GACTGGCG            TTTTTTACAGATACA  93 45
CH53_RS19565 4411074 .. 4411099 +  -2.5  -2.70022   CTCCGTATAAATAAC         CACCAG-TAGCC CTT GGAAAACTGGTG         ATTATGTGCAGTAAA  41 41
CH53_RS19570 4412549 .. 4412566 +  -5.5  -3.14745   CTCAGTTCGGCAAAA             TCTTGCG CTAA CGCAAGC              TGTCTGTTGTCGGCA  54 131
CH53_RS19575 4413477 .. 4413492 +  -2.4  -2.90496   AGTAGCCCAGGGAGT              AGGGTG TATT CGCCCG               TCATTTCGCAAACCA  40 165
CH53_RS19595 4416124 .. 4416140 +  -6.5  -3.29332   GAGTAAATTAAGGGT              GGGGC GGTGATG GCCCC              TCGTTTTCTTCATTG  60 30
CH53_RS19600 4417338 .. 4417368 +  -2.4  -4.09685   GGCTGGCGGGTAAAT       TAAGGGTGGGGC GGTGATG GCCCCAGCCAGA       TTTTACCCGATAACG  53 76
CH53_RS19610 4419229 .. 4419255 +  -8.1   -4.2558   TCAATGATCCAACCA         CAGTACTGGAA GGCAA TTTCAGTGCTG         TTTTAGTGAAACATA  77 63
CH53_RS19615 4420386 .. 4420411 + -12.7  -3.33315   TTTGCTCTGTGAGAA         GCGTTATGGAC GCCT GTTCATAACGC          TTCTAGCCATATTAA  87 74
CH53_RS19620 4422001 .. 4422025 +  -4.1  -3.65832   TTGTTTGGCAATAAC          GGGAAAGGGGT TGT GCTCCTAACCC          TATTTTACGGCATTT  55 144
CH53_RS19630 4424006 .. 4424031 +  -6.2  -4.96468   CAAGTGGAATTTAAA         GCATCGAACGG GTTAA TCGT-CGATGC         TTTTCTTTACCTTTA  82 94
CH53_RS19665 NONE
CH53_RS19670 4431603 .. 4431624 +  -8.1  -4.42653   AATTCGACTAGAAAA           GGCGATAAAC TTG GTTTA-CGCC           TTTTCTAACTCAAGT  80 59
CH53_RS19680 4434849 .. 4434865 +  -3.8  -4.04491   CACTGTAATGGAGCA              TGTTAT GACAG ATAACA              TTATTATTGTGGGTT  59 33
CH53_RS19685 4436036 .. 4436057 +  -5.7  -4.20106   CATCACAACGCCAAC           CCCCCGCCA CCGG TGTAGGGGG            TTTTGCCTGCAATTT  67 75
CH53_RS19695 NONE
CH53_RS19720 4442327 .. 4442364 +  -9.9  -3.12505   TGGTACCGGTATTCG   CCGATAAGACAGGTG TTTTCAGC CCCCTGCCTTATCGG    TATTGGCTGTAAAAT  73 321
CH53_RS19730 4444347 .. 4444376 + -13.7  -4.21974   GGTCATCGAGCATAG       CCGGCAAAATATC GATT GATACTTTGCCGG        TTTATTGCGTGATGA 100 7
CH53_RS19740 NONE
CH53_RS19745 NONE
CH53_RS19750 4453346 .. 4453356 +  -5.4  -3.61715   CGCCCCCCTCTTTTT                 TCTG GTT CAGA                 TTCTTGAGAACAGTG  59 425
CH53_RS19760 NONE
CH53_RS19765 4456424 .. 4456465 +  -9.3  -2.75577   ACGCTGACAGTCGTT GTAAACCCGTACTTCCGCT AACC GGCGGCAGTGCGGGCTAGC  TGCATTTTAGGCTGG  68 34
CH53_RS19790 4462181 .. 4462193 +  -6.9  -2.71011   TTGTTTTTACTTAAC                TGCCC TGC GGGCG                TCCTTGCCCGCCAAT  56 53
CH53_RS19820 4469365 .. 4469399 +  -9.2  -3.55505   AATCAGTGTTGCCAA    GGTAGGCAGCCGCGC CAACCA GCACGGCCGCC-ACC     TATTATTGTGCTTTT  74 59
CH53_RS19840 4472206 .. 4472238 +  -2.8  -3.09492   TCTTTTAGCACGCTA     ACTATTCTTGC-TCT TATC AGACGCAAGAAAAGA      TGTTAAAATTGACGC  43 25
CH53_RS19845 4473044 .. 4473071 + -10.6   -3.7456   TAATCTAATCCAAAA        TACCCGGCGACT TGAA AGTTGGCGGGTA         TATTTATTGGTCTCG  83 38
CH53_RS19850 4474165 .. 4474185 +   -14  -3.33762   TTAAACCAAAAAGAA            GGGCCACC GCATA GGTGGCCC            TTGATCTGATTCGTT  95 63
CH53_RS19870 4478796 .. 4478812 +  -9.4   -5.4492   TTTTGTTACTGTAAG              GGCAGC TACGT GCTGCC              TTTTTTATGTGTCTG 100 52
CH53_RS19875 4480773 .. 4480788 +    -6  -5.22039   AAGGCCAATGCATTA              AGCCGC TCTT GCGGCG               TTTTTTCCATTTCCG  89 374
CH53_RS19885 NONE
CH53_RS19890 4483238 .. 4483249 +  -4.4  -4.52589   TTAAACACTAACTTT                CACT CTGG AGTG                 TTTTATGTCCACCGC  69 37
CH53_RS19895 4484967 .. 4484982 +    -4  -3.33969   TTAGCATACTCGTCA              CACTAA ATTA TTGGTG               TTGTACAATCGGTTA  50 257
CH53_RS19900 4485453 .. 4485470 + -12.7  -4.52857   CAGCGATTCACTCGA             CACCCGG TTTA CCGGGTG              TTTTCTATCAGGAGT 100 95
CH53_RS19905 4486867 .. 4486878 +  -2.2  -3.35813   GTCGCGAATTTGCAA                GTCT GTGT AGGC                 TTCGTTGACCTGAGG  45 301
CH53_RS19925 4492600 .. 4492617 + -14.1  -4.85822   TGTCATTAGTTACTT             GCGCGCC TTTG GGCGCGC              TTTTCTCTTTGTGAT 100 123
CH53_RS19945 4497348 .. 4497358 +  -5.4  -2.80016   ACTGCCGCCATTAAG                 TTGC TTG GCAA                 TAGTTAATACTCCGC  49 234
CH53_RS19955 4498529 .. 4498574 +  -9.8  -2.61106   TGTTACCAACCATCC CCCATTAGCGTGTTATCTCG CCCCAC CACGATAACGCGCTAATAGG TGCGTTCTCCCTATA  70 71
CH53_RS19965 4502876 .. 4502916 +  -8.5  -5.79595   ATCGACATCGTTTAT CCGCAGGATAACAACGCCTC AATC GGGGCGTTG-TA-C-TGCGG TTTTTTATTTTGGGA 100 52
CH53_RS19985 4508442 .. 4508460 +  -5.8  -3.01791   ACCGTGCCCCCGGTG             CCAGCGGC AAT GCCGCACG             TATTGCGCGGGAAGT  53 126
         tpx 4510010 .. 4510034 +   -10   -4.8622   AGCATTAACTCAAAA         CGGCTG-GCCC ATTT GGGTACAGCCG          TTTTTCATTACAAAC  93 69
CH53_RS20005 NONE
CH53_RS20010 4513157 .. 4513191 +    -5  -3.27475   GCCCCGCCCCAATCC    CTTGCGCCGCACG AGTGGATAAA CGCGCGGC-CAAG     TCTTGTGATAGCCAG  52 218
        pspF 4518435 .. 4518472 + -10.7  -2.94032   ACTACCCTATTCAGG   CCCGATCAGGTTTATAT GAAT ATACAGACCTGATCGGC    ATTTAATTAACACCT  78 40
CH53_RS20060 NONE
CH53_RS20065 NONE
CH53_RS20070 NONE
CH53_RS20075 NONE
CH53_RS20080 4525550 .. 4525571 + -11.6  -4.40037   CTCACGATACCCCAC           TCCGCGCT CATTTC AGCGCGGA            TTTTCCTGCTTCTTT  93 66
CH53_RS20085 NONE
CH53_RS20090 4527139 .. 4527154 +  -3.2  -3.05046   GATTGCAGCGTTTTA              GTGGGT CGCC AACCAC               GTTTTAGCAACATCA  45 59
        tppB 4530165 .. 4530175 +  -6.8  -2.94322   CTCCCACGTAAAACT                 CAGG CAG CCTG                 TCGTTTGGATACAAT  59 88
CH53_RS20110 4531402 .. 4531438 +  -7.9  -2.83112   AAACCGCCTCTTGTT    TACACCGCTCGCTGTAG CAG TTACGCCGAGCGGTGGC    TGTACTGCATTGGAT  62 46
CH53_RS20115 4531876 .. 4531915 +  -7.8  -2.98033   GTAATAATTGGCAGG  GATTACCTACAGCGGTGG ATAC TCACTGCTGTAGGACAAC   ATTCTATTTCTATTT  63 58
CH53_RS20120 4532679 .. 4532700 + -11.6  -2.87463   AGTTGATTAATTAGA           GTGCCCCT GCATTA AGGGGCAC            TGTATAGCAGGGGTT  80 44
CH53_RS20150 4538477 .. 4538501 + -15.1   -5.1356   TGTTTTTATGTAAAA          GCCAGAGTTCG TAA TGAACTCTGGC          TTTTTATTACTACAA 100 56
CH53_RS20160 NONE
CH53_RS20165 NONE
CH53_RS20170 4542744 .. 4542763 +  -5.8  -2.78327   CGCGGGGGTAAAGTT            TGAAACAC CGAA GTGTTTTA             CTTTGCCACTTTGGT  52 473
CH53_RS20185 4545478 .. 4545501 +  -9.6  -5.80364   TGAAAGTGACCTTGA          TGCCAGCG ATCCCCTC CGCTGGCA           TTTTTTTCTTGACCT 100 53
CH53_RS20190 4546192 .. 4546210 +  -5.9  -3.16071   TTTGTCAGAATTTAC             CCAGCCG CTAGT CGACTGG             TCTATTAATATAGGA  54 69
CH53_RS20195 4547358 .. 4547388 + -13.4  -5.43553   TAAATCATTAAATAA       CAGCCAGTTAGATT AAC ACTCTGACTGGCTG       TTTTGTTTTTTGGCT 100 54
CH53_RS20200 4548043 .. 4548057 + -11.4  -5.31275   ACTGATTAGCATCAA               GGCACC TAA GGTGCC               TTTTTTCTCATCGCG 100 36
CH53_RS20205 4548846 .. 4548875 + -13.7  -4.65895   GACAATTTTACTTTC       AAAAAAGGTGGCC CAAA GGCCACCTTTTTA        TTTTTCACTGAAAAC 100 82
CH53_RS20215 4550910 .. 4550920 +  -6.8  -2.60725   TCTTCGCCACATAGC                 TGCC AAC GGCA                 ATTGATGTGATTTGA  56 227
CH53_RS20220 4551596 .. 4551613 + -14.1  -2.86539   CGTAACAATAATTAA             GGGCGGG TTTA CCCGCCC              TACTTATCACTTCAC  93 69
CH53_RS20225 4553103 .. 4553131 +  -9.5  -2.52676   GCCGTTAATGCTCTT        TCGCCGGTAGCAT GCA ACGCTACCGGTGC        TAAGTTCGCGCAATC  70 33
CH53_RS20235 4555921 .. 4555931 +  -6.8  -3.01712   CTTAATCTTCCTCTG                 TCCG TTA CGGA                 TATTAGACACCAAGG  59 399
CH53_RS20240 4557180 .. 4557209 +  -5.1  -3.76176   CGTTAAAAGTGAAAA       TAGGACAGG TATATTGACTCC CCTGTCCTA        TTCTTAATCACTTTA  58 35
CH53_RS20250 4559804 .. 4559814 +  -4.6  -3.39449   CTCCTTGCCAGCAGA                 CGGG CAG CTCG                 TTAATATTCGTCCCC  52 180
CH53_RS20255 NONE
CH53_RS20260 4560124 .. 4560135 +  -4.4  -4.04318   ATTCGGACGCACCAC                TCTG GTCA CAGA                 TTTATCATCTCTAGA  61 27
CH53_RS20265 4560728 .. 4560752 +  -2.1  -4.35327   CACTAATCAGATCCC          ACTCCGTTGAT CTC ATTAACGGAAC          TTTCGTTTTTAATCC  59 525
CH53_RS20270 4562250 .. 4562269 + -10.7  -5.42198   GATGATAATTAAAAA            CGCCGCT TTCAAT AGCGGCG             TTTTCTTTTTTAAAC 100 59
CH53_RS20275 4562797 .. 4562815 + -14.6  -5.75342   CCTGAAAATGAAAAA             TGGCGCAC ATT GTGCGCCA             TTTTTTTTACCCCGC 100 49
CH53_RS20325 4576283 .. 4576302 +  -7.1  -6.17184   CTGTGTGTAGTCTTT            GCCTGTC ATCTAA GACGGGC             TTTTTTTTTACTCAT 100 365
CH53_RS20335 4579855 .. 4579870 +  -3.2  -4.28018   CCTGGATATTTTAGG              CATGAG TCGC CGCATG               TTTTGATGGAATATT  59 4
CH53_RS20340 4581287 .. 4581303 +  -2.3  -3.17238   CATTCACCCATGGAG              ATGATAA TCA TTATCAC              TTAAATATGTACTCT  43 233
CH53_RS20345 NONE
CH53_RS20350 4583657 .. 4583670 +  -3.9  -3.53563   AAATTACTGATCAGC               TATCA ATGG TGATA                TTTCACCCAAACTGT  52 14
CH53_RS20355 NONE
CH53_RS20360 4585874 .. 4585888 +  -4.2  -4.12188   TGCAGGCGCTGCAAT               GGCTGA ATA TCATCC               TTTTCGGCGTGGTCG  60 229
CH53_RS21945 NONE
CH53_RS20520 4619558 .. 4619573 + -10.4  -2.78384   AACGCATAACAGAAA              GCCCAC CTGA GTGGGC               TATAATGCAAAAACC  73 265
CH53_RS20730 4649254 .. 4649282 +  -3.1  -2.82193   GCAATGAAAAACTAT        GCAGTTCCAATCA TTC TGATTGTGATAGC        TATCATAGGTCTCCT  44 69
CH53_RS20735 NONE
CH53_RS20740 4651146 .. 4651163 +  -9.8  -5.29782   CTGTAAAATAAGTAA             CCCGGC CCCGCT GCCGGG              TTTTTTGTGCCTGTA 100 30
CH53_RS21950 NONE
CH53_RS20750 4652255 .. 4652271 +  -7.2   -5.4505   GCAGAGTAGCAGTTG              GGTCGC ATAAC GCGGCC              TTTTTTATTGGCGGG  93 32
CH53_RS20755 4653028 .. 4653041 +  -4.5  -3.77806   CCCCAGAGTAAATAA               CTGAC AACT GTCGG                TGTTTTGCTATGGGC  56 65
CH53_RS20760 4654207 .. 4654220 +  -4.5  -2.60496   CCAATCCGTGGATCC               GCTGG TTTC TCAGC                ATATTTCAACAGAAA  47 140
CH53_RS20765 NONE
CH53_RS20770 NONE
CH53_RS20775 NONE
CH53_RS20780 NONE
CH53_RS20785 NONE
CH53_RS20790 NONE
CH53_RS21955 NONE
CH53_RS20800 NONE
CH53_RS20805 NONE
CH53_RS20810 4659051 .. 4659063 +  -6.9  -3.01712   CCGTATAACGCATTT                GTGGG CAT CCCGC                TATTCACAGCAGCAA  59 50
CH53_RS20815 NONE
CH53_RS20820 NONE
CH53_RS20825 NONE
CH53_RS20830 NONE
CH53_RS20835 NONE
CH53_RS20840 4661509 .. 4661526 +  -4.1   -2.7535   TCGCTCATTTTTGTT             TTTGCCG TGCG CCGCAAA              TCATGTATTCCCCAA  45 443
CH53_RS20850 4663318 .. 4663331 +  -2.3  -2.71364   AGGGTAAGTTTTTGT               GCCGG AAAA TTGGC                TAATTAGAAAAATAA  40 9
CH53_RS20865 4666985 .. 4667034 +  -7.2  -3.55548   CGTTTAAAACAGCGA CCTGTGC-TAACGATGATATCGC CCTGC GCGGTGTCATTGTGGTGCTCAGG TTTCGGAGAGTGTTA  66 34
CH53_RS20870 NONE
CH53_RS20875 NONE
CH53_RS20880 4670204 .. 4670221 + -11.3  -3.62275   TTAGTCCCTTATCCA             TGCCGGA TTCA TCCGGCA              TTTACCCTCGTAACT  88 55
CH53_RS20885 4671693 .. 4671715 +  -5.1  -2.77182   AAAGACGTCTTTTTA           TATAAATAT ATTTG ATATTTATA           TCATTAGCTGTCGCC  50 218
CH53_RS20890 4673250 .. 4673272 +  -6.2  -3.71284   CAGGCATTGGTTGCT           GCTCTTGGCA CCT TGCAATGAGC           TTCTATTGCTCAGGC  64 5
        sgbH NONE
CH53_RS20900 NONE
CH53_RS20905 4675107 .. 4675122 +  -3.2  -4.03234   TCGGGGCGTTTTATT              TGGTGG CTAT CCACAA               TTTCTCTCACCAAAA  56 21
CH53_RS20920 4677397 .. 4677425 + -11.9  -3.62224   GCTGGTTTTGCAAAA        TATTGATATAGGC CGC GCCAATATCAATA        TTCTTCACCGGATCT  85 370
CH53_RS20930 NONE
CH53_RS20935 NONE
CH53_RS20940 4680753 .. 4680764 +    -3  -3.94634   CCTGCCGGAGGATAA                TGTA TGAA TACA                 TTGTTTAGCCTGGTC  53 19
CH53_RS20945 4681665 .. 4681705 + -11.4  -3.63515   TCAATTAAGTCCCAA TAAACAT-GCCGGATAGCA ATTA TGCTGTACGGCAATGTTTA  TTATTCAGGCTCAAC  88 41
CH53_RS20950 4683013 .. 4683044 +  -7.5  -5.60993   AGCCGGCTATAAAAA     GCACCGCATTATTGG TCAG CCAATAA-G-GGTGC      TTTTTTTATGACCAA 100 77
CH53_RS20955 NONE
CH53_RS20960 NONE
CH53_RS20965 4687335 .. 4687349 +  -2.1   -3.3353   TTGGGGCATTAAACC               TTCTC AACCA GAGGA               TCTCTTTATGAAACG  45 29
CH53_RS20970 4689259 .. 4689275 +  -4.3  -3.14211   AGGGTATCAATATGG              GTGACAC GCT GTGACGC              TTGCTGAGGAGAGAT  48 446
CH53_RS20985 4691614 .. 4691626 +  -6.3  -4.05033   CATAAGCAATCTGGT                CATGA ATG TCATG                TTTGTGTGCAGTACC  68 263
CH53_RS20995 4692956 .. 4692970 + -11.4  -4.38154   CGTCACCAACCGAAT               CCGTCC TTT GGACGG               TTTTCTCCCCAATAT  93 42
CH53_RS21000 4693870 .. 4693889 + -12.2  -5.74288   TCAAAGGCTCGTCGA            GGCACAAC TTCT GTTGTGCC             TTTTTTATTATTTAT 100 104
CH53_RS21005 NONE
CH53_RS21010 NONE
CH53_RS21015 NONE
CH53_RS21020 NONE
CH53_RS21025 4700112 .. 4700133 +  -9.4  -4.66746   TAAGTTGTCATTAAA           CCCTGCCA TTAATT TGGCGGGG            TTATTTTGTTTTATA  93 60
CH53_RS21030 4701149 .. 4701180 + -13.2  -5.77988   ATACCGTATTACTTT      GGGGAAAAGTCGACT CCC GGTC-ACTTTTCCCC      TTTTTTTATCTATGT 100 90
CH53_RS21035 4702042 .. 4702056 +  -7.1  -3.20633   CATATACGGCTAATT               GCACC ATGAC GGTGC               TTGGCTCTGTTCTAG  63 154
CH53_RS21040 4703554 .. 4703591 + -13.6  -3.53761   ACTCTATTGTCATTA   TTCAGAAAGCCAGTCA GTAAAA TGACTGGCTTTCTGCG    TTTAAACAGCCATTG  95 57
CH53_RS21060 4708643 .. 4708660 + -12.7   -4.1899   GGCTGCCATAAAAAA             CCCCGCT GGCG AGCGGGG              TTTTCAATCAGATGA 100 46
CH53_RS21085 NONE
CH53_RS21090 4717344 .. 4717372 + -13.9   -3.6579   GCTTTTAGCTAGTCA        TCAGGGTAGCTCA CAT TGGGCTGCCCTGG        TTATTCCCCTACGTT  95 33
CH53_RS21100 4720084 .. 4720098 +  -2.2  -5.03201   TTTTTCGTTTTGGAT               TTTTGA GGG TTAAAA               TTTTTAGTTATTGTT  69 203
CH53_RS21105 4721951 .. 4721961 +  -8.2  -2.64616   TCCCCTGCTAATGCG                 GCCG AAC CGGC                 TACTCTGAGTAAAAA  61 30
CH53_RS21110 4722778 .. 4722792 +  -2.8  -4.87786   CTTCTTCATCCAGTG               CAGC ACAGGTC GCTG               TTTTTGTACCATTCA  71 418
CH53_RS21145 NONE
CH53_RS21150 4729076 .. 4729101 +  -2.5  -4.84527   CTGATAGTGACCAAT         CTAATTGAGTG GCTT CACCCCGTTAG          TTTTTGGTATCTGAA  68 18
CH53_RS21170 4733647 .. 4733657 +  -2.4  -2.97825   CCAGTAAGGACTCAG                 CAGC TAC GCCG                 TATCCTATTGTTCCT  42 139
CH53_RS21175 4734098 .. 4734113 +  -3.2  -2.72031   TAAAATGACCCTGAG              CCATTG TTCA CAAGGG               TACTCTGATTATCAT  43 67
CH53_RS21180 4734951 .. 4734969 +  -7.4  -3.08679   GTGTTCCCTCCCAAA             CCCTGC TGAAATC GCAGGG             TATTGGATAGGACCG  61 53
CH53_RS21190 4737168 .. 4737185 +  -6.2  -4.89567   CATGACTTGCAGATA             CCGGGT AATTAA GCCCGG              TTTTGTATTTTACGC  82 256
CH53_RS21200 4738149 .. 4738187 +    -4   -3.3382   TTTAATTCCCTCTAA   TACCTTCATGCGTTGA ACTGTTA TCAATGAATGAAGATA   TTCGTCTCTGATAAA  50 251
CH53_RS21210 4740720 .. 4740743 +  -6.8  -3.23538   TTCTGCATCCGGAAG          CGTATCGAAT AAGG ATTCAATACG           TTCGTCGTAGGTTCT  57 318
CH53_RS21220 4742663 .. 4742681 +   -16   -4.8048   AAGCTTAATAAATAT             CCTCCGGC ATA GCCGGAGG             TTTTTCATATGCGCC 100 126
CH53_RS21230 NONE
CH53_RS21235 4744504 .. 4744521 +  -6.2  -4.36262   TATTCCTTTCAATCG             CCGGGC GATTAA GTCCGG              TTTTGCTATCCCTAT  74 72
CH53_RS21240 4745611 .. 4745630 +  -2.2  -5.61881   GACCAAATACGATTC            CTCTTTTA GATT TAAAAGAA             TTTTTCTTTTTAAAA  80 357
CH53_RS21245 4747137 .. 4747152 +  -2.5  -4.22346   GTGTTATATATACAC              TAGCC AAACAA GGCTG               TTTTCCCTCACTTTC  57 110
CH53_RS21965 4750212 .. 4750231 + -16.4  -2.86785   GTAAATATACAATTA            GCCGGGCG ATAG CGCCCGGC             ATTGTTACTCTGGTA 100 37
CH53_RS21270 NONE
CH53_RS21275 4753069 .. 4753087 +  -2.4  -2.96237   CGGCCACTCAATATC             CGGTGT AAGAGAA ACATCG             ATGTTTTTCACCTTC  42 90
CH53_RS21305 4759684 .. 4759697 +  -2.3  -4.66395   GCCGATTTATTAAAT               TCAGC ATCA GCAGA                TTTTCCTATTTTTTT  67 464
CH53_RS21315 4761106 .. 4761117 +  -4.4  -2.87931   GCCATTTTTACCCCC                GGTA AGCT TACC                 TATCTCAAAAATAAA  48 218
CH53_RS21325 NONE
CH53_RS21330 4762159 .. 4762208 +  -7.3  -2.60199   GGTATATATATCCCG ACA-AAAGTAATCTCTCTTGCTGA CAC TCAGCAAGAGAGATTACCAACTGA ATATGTTTGCTTACC  59 195
CH53_RS21335 NONE
CH53_RS21340 4764230 .. 4764240 +    -4  -3.56594   AGGCCGAGTATAGGA                 TTTC GGG GAAA                 TTTCGGGGGATTTCG  52 39
CH53_RS21365 4767976 .. 4767989 +  -6.7   -2.8547   GTCCCACGCATTCTG               TGGCT GGCA AGCCA                TATCATATCGGCCAT  54 217
CH53_RS21375 4770458 .. 4770481 +  -2.4  -4.26903   ACACACGGTTAGCAT          CGC-CATAGCC CTC GGTTATCAGCG          TTTTGGTGACATCGA  57 507
CH53_RS21405 4776389 .. 4776407 +  -8.8  -4.14652   TATCCCATAAAAAAA             CCCGCC AATTAAC GGCGGG             TTTGATATTTTTAAT  82 62
        pabB 4778305 .. 4778319 +    -5   -3.0353   TAACTTATAAGCGAG               TCATTC TGT GAGTGA               ATTATTTATCGGGCA  51 73
CH53_RS21420 4779308 .. 4779327 +  -2.1  -2.78463   GGCTAACACCAGTAG            GACCC AAATTAACAA GGGTC             TGTGATGGCAAGACT  41 443
CH53_RS21425 4780868 .. 4780885 + -12.7  -4.95484   TACCGTGATCAATAA             GGGGAGC CGAA GCTCCCC              TTTTCTTTGATGGTA 100 57
CH53_RS21435 4784324 .. 4784345 +  -5.1  -4.47707   CGTAGAAAGGTAATG           CCCTGTTCT GTTT GGAACACGG            TTATTTTTACTCAGC  68 56
CH53_RS21440 NONE
CH53_RS21445 4786070 .. 4786087 + -10.5  -5.64421   TTAGATTGAGAAAAA             CCGGGGG CCTG CTCCCGG              TTTTTTATTTAAGAT 100 49
CH53_RS21450 4786910 .. 4786925 +  -4.8  -3.14132   CCGGTTTCTGTGCAA              TATATC AGCT GATATA               TTGATAAGCAGAAAC  53 277
CH53_RS21455 4787708 .. 4787731 + -11.8  -5.49234   TTGGGCAAAAATTAA          CCCCGC-ATTC AAA GAATAGCGGGG          TTTTTTATTACCTCT 100 80
CH53_RS21465 4792767 .. 4792777 +    -4  -4.41422   TTAATGGCACAATAT                 TAAC AAG GTTA                 TTGTTTTGTATGTCG  64 120
CH53_RS21470 4793247 .. 4793260 +  -5.3  -4.01135   AATAACAATGTAAAT               TTACC TTAG GGTAA                TTTACTATTATTACC  63 120
CH53_RS21485 4797016 .. 4797031 +  -7.5  -4.56597   CTTAATACGAAAAAA              CCCGC ACAAAG GCGGG               TTTTTACAGCAAAAG  81 67
CH53_RS21500 4799212 .. 4799251 +  -4.2  -4.46212   CACCTTAGATCATAA  TAGCCGGGCTTGATTATTG GTA CATTTAACT-GCCCGGCTA  TTTTATGCTAACACC  64 214
CH53_RS21525 4802769 .. 4802796 + -10.7  -2.65532   GAATAAATAATTGAC        CTGCGGGTT-TG CTACC CATAACCCGCAG        TGCATTTCCCATGAT  76 35
CH53_RS21540 4804576 .. 4804593 +  -5.6  -3.17797   AAAACGATACCTACT             GATTGG CGCACA CCAATC              TTAACTCTGTATCAG  54 435
CH53_RS21560 NONE
CH53_RS21565 4809930 .. 4809968 +  -9.7  -2.65942   CGCTAACATCAAATC  TTTGTGGGGCA-GTAATC GCTC GATTCCCTGCCCCACACA   CTCTTTACGTATCAG  70 55
CH53_RS21575 4811916 .. 4811932 +  -8.1  -2.53271   TTAGAATGTTATATT              TATTAGC ATA GCTAATA              CTATTGTAACAATGG  61 97
CH53_RS21580 4812539 .. 4812565 +  -9.4  -3.24698   ATGTAATATAATCTT         TGGCCCCACGTT ACT AGAGTGGGGCTA         TCATTATTTTTTGGT  73 35
CH53_RS21585 4813165 .. 4813181 +  -6.5  -3.53761   TTCAATAGCTGTTCT              GCGCG AGATAAC CGCGC              TTTCAACACAAATTG  61 172
CH53_RS21595 4815180 .. 4815198 +  -3.8  -3.98661   TCAATACCATACAAC             CCACCAAT AGC GTTGATGG             TTTCTAATAGATGTG  59 203
CH53_RS21600 4815828 .. 4815853 +  -9.7  -3.04248   TGATAAACCCCAACA         GCAGCCATAGT TGAT GCCATGGCTGC          TGTTACAACGTATTG  72 51
CH53_RS21610 4817731 .. 4817746 +    -4  -4.23758   GTTTTGCAAATAGTG              TGCGACT TTC AG-CGCA              TTTTCAGTATGACGT  62 475
CH53_RS21620 NONE
CH53_RS21625 NONE
CH53_RS21630 4821628 .. 4821644 +  -9.4  -4.82128   TCTTATCATCTTTTA              CCCCTG TCACT CAGGGG              TTTTATCTTTGATAG  93 181
CH53_RS21635 4823772 .. 4823782 +  -6.8  -3.88583   CGAGATACAAATCGG                 TCGG GAA CCGA                 TTTGTACAGCATTTA  69 89
CH53_RS21640 4825365 .. 4825389 +  -5.8   -4.7373   TGGCCAATCTCACTA          TACAGGTGGA TAAAT TTCATCTGTA          TTTTTCATACGATAG  75 62
CH53_RS21645 4825734 .. 4825751 + -12.7  -5.35222   AACCGTTAGTCTGTA             GCCCTCG TCAT CGAGGGC              TTTTTTATGCATTTT 100 32
CH53_RS21665 NONE
CH53_RS21670 4830890 .. 4830902 +  -6.3  -2.74078   GGCTCCTTTAACTGG                CCTTT ATA AAAGG                TAGATTTGATTTACT  54 17
        mnmA NONE
CH53_RS21680 NONE
CH53_RS21685 4834291 .. 4834318 + -10.7  -3.36131   TATTTTAATCCCTAA        TACAGGTGGTA ACCCAA TGCCACCTGTA         TTATCCCCTGATTTT  80 41
CH53_RS21690 4835085 .. 4835115 + -14.9  -3.39288   GGTTTTAATTGTTTA       CTTGCTGGGTAAT ATTGC ATTACCCGGCAAG       TCTTATTGAGGAATG 100 47
CH53_RS21695 NONE
CH53_RS21700 NONE
CH53_RS21705 4838496 .. 4838513 +  -9.8  -4.21676   ATAGAGATACAAAAA             CGCCCC ATTTAC GGGGCG              TTTTCGATAGGTTGT  89 50
CH53_RS21740 4849200 .. 4849229 + -11.5  -3.23216   TAATCAGCGAGTTAA       CGTGGGTTTTTCA GCAA TGAGAGACCCGCG        TTAATGCTAATGCCA  82 38
CH53_RS21795 4858098 .. 4858129 -    -8  -2.65161   AAACGTCAATAATAC      CTGCCCTCACCCAA TAAA TCGGGTGAGAACAT       TACTCGTTTCGCTGA  61 78
CH53_RS21790 4856393 .. 4856410 - -10.5   -5.9667   AAAAAGATAAAAAAA             GGGAGGC TTTC GCCCCCC              CTTTGCACTCCCCAA 100 48
CH53_RS21785 NONE
CH53_RS21780 NONE
CH53_RS21775 NONE
CH53_RS21770 4854529 .. 4854546 - -11.3  -2.69204   AACTAAAGTTATAAT             CGGCGAT TTTC ATCGCCG              GATTTATGCTGCCAA  79 61
CH53_RS21765 NONE
CH53_RS21760 NONE
CH53_RS21755 4851866 .. 4851904 - -13.2  -4.75472   TTTATATCAACAAAA   CGGCCTGGAGAAAGGATT TAG ATTCCCTTATCCAAGCCG   GTTAGCAGAACGTTA 100 104
CH53_RS21750 4850231 .. 4850256 -  -7.6  -5.27335   TCTGGCAAATAAAAA         CCGCTACC-CT TCATT AGCGGCAGCGG         TTTGTTTAAGTACCA  90 47
CH53_RS21745 4849256 .. 4849278 -  -8.5  -2.72511   GCCACTCGCTTAAAT           TTTCTGCCG GTTTG CGGCAAAAA           CATGTTCGGTTTAAA  65 103
CH53_RS21735 NONE
        lolD NONE
CH53_RS21725 4841935 .. 4841949 -  -6.4  -3.86015   GACTGGGGTGACAAA               TCTGCC CGG AGCAGA               GTTGAACACTGCTTG  66 128
CH53_RS21720 4840872 .. 4840884 -  -4.9  -2.82516   TTTGCTACGACTATA                TTGTT TGA AACAA                CTATATTATTTGAAA  50 65
CH53_RS21715 4839899 .. 4839932 - -16.8  -4.13767   GGTGGGATGCTAAAA     CCCTGCGGGGTGAT TTATTC ATCAACCCGCAGGG      ACTATCGTTTATTTA 100 54
CH53_RS21710 4838490 .. 4838519 - -15.1  -3.10493   CCGTGAATAGAGATA       CAAAAACGCCCCA TTTA CGGGGCGTTTTCG        ATAGGTTGTTGAGCT 100 55
CH53_RS21660 4828213 .. 4828228 -  -2.6  -4.08221   TTCAATAGAATTAAA              TAACAT AGAT ATGTCA               AATGACTTGCGATAA  55 245
CH53_RS21655 4827221 .. 4827231 -  -5.4  -3.33969   CAATTTACGCCATAA                 CCTA CCA TAGG                 AAACCGCTGGCTATG  56 65
CH53_RS21650 4825851 .. 4825872 - -10.2  -5.76633   GGATAGATAAAAAAA           TAGGTGCC ACATCG GGCACCTA            TCCTATTTATTTCAC 100 49
CH53_RS21615 4817070 .. 4817085 -  -6.8  -2.79878   GCCAGTCAGGTAAAC              CCGTGG TGTA CCACGA               TTTGTCTGAAGCCGA  54 299
CH53_RS21605 4815828 .. 4815853 - -11.2  -3.14126   TGATAAACCCCAACA         GCAGCCATAG TTGATG CCATGGCTGC          TGTTACAACGTATTG  82 28
CH53_RS21590 4812706 .. 4812717 -  -5.8   -4.1196   AATTGACTGCCAAAA                TGCG GTGA CGCA                 ACTGGATATCAACCA  66 337
CH53_RS21570 4809861 .. 4809874 -  -8.1  -3.07962   GGTTATAGCTGAAGA               GCAGG AGCG CCTGC                GTGAGGCTCAGGATC  60 131
CH53_RS21555 4806522 .. 4806540 -  -7.5  -3.49482   CGACACCACCAAACA             GACCTAT TAGAC ATAGGTC             TTGATACCATCAGAA  66 91
CH53_RS21550 4804490 .. 4804509 -  -8.6  -3.18268   TTGTAAGTAAAACTA            CGA-GCGCA AAT TGCGCATCG            CCAATTCCTGCAGAA  68 337
CH53_RS21545 4803825 .. 4803838 -  -6.7  -3.72576   TGCGCCCTCAGCAAA               TGGGT CGAA ACCCA                TCTAGGGCGGGTCAT  63 415
CH53_RS21530 4802618 .. 4802628 -  -6.8  -5.47218   TGGCAGTGAAAAAAA                 TGCC GCA GGCA                 TTGGTTTACAGTGTA  93 267
CH53_RS21520 4801669 .. 4801698 - -10.1  -2.82516   CTGGGTACGACGATA       CTCTGATACTGCC AGGT GACAGCATCAGAA        TCAGGAGGGGGTGTT  73 40
CH53_RS21515 NONE
CH53_RS21510 4800752 .. 4800763 -  -5.8  -3.76373   TTTTTAACACTTAAA                GCTG ATTG CAGC                 AAGAATAAAGGTGGT  60 117
CH53_RS21505 4799212 .. 4799251 -  -4.2  -3.47078   CACCTTAGATCATAA  TAGCCGGGCTTGATTATTG GTA CATTTAACT-GCCCGGCTA  TTTTATGCTAACACC  52 49
CH53_RS21495 NONE
CH53_RS21490 4797016 .. 4797031 -  -7.5  -5.27779   CTTAATACGAAAAAA              CCCGC ACAAAG GCGGG               TTTTTACAGCAAAAG  90 47
CH53_RS21480 4794333 .. 4794349 -  -3.7  -3.87815   GTTTAGCGCCATAAA              TAACCGA ATA TCAGCTA              TGACCGACAATCCCT  57 19
CH53_RS21475 4793177 .. 4793188 -    -3  -5.63645   GTAAAACATAAAAAA                CTAA AAAT TTAG                 CTTAAGTCAATTATA  81 205
CH53_RS21460 4787708 .. 4787731 - -11.8  -3.80855   TTGGGCAAAAATTAA          CCCCGC-ATTC AAA GAATAGCGGGG          TTTTTTATTACCTCT  91 75
CH53_RS21430 4780868 .. 4780885 - -12.7  -3.72324   TACCGTGATCAATAA             GGGGAGC CGAA GCTCCCC              TTTTCTTTGATGGTA  90 145
CH53_RS21410 4776389 .. 4776407 -  -9.5    -5.626   TATCCCATAAAAAAA             CCCGCCA ATTAA CGGCGGG             TTTGATATTTTTAAT 100 58
CH53_RS21400 4773450 .. 4773465 -  -6.2  -3.44622   CACGCCCACAAGTAA              CTGTAT ATGC ATACAG               TATAATGCGAGTTAT  62 76
CH53_RS21395 NONE
CH53_RS21390 4772706 .. 4772716 -  -2.4  -3.16177   AGGTTACAGAGTGAA                 CAGC GTT GCAG                 GGTAATAATGGTAAC  43 50
CH53_RS21385 4772206 .. 4772236 -    -9  -2.61383   ACTTGGAGGGATAAG       CAGGTGCCTGATAC GTT GCCTCAAACACCTG       ATTGGTAGCGATTAG  67 69
CH53_RS21380 4769810 .. 4769832 -  -7.1  -3.60475   AACAAATGGCCGAAA          TAAC-GCAGC AACC GCTGCTGTTA           CAGACATTTAAATTC  64 184
CH53_RS21370 4767795 .. 4767822 -  -4.1  -5.23396   AATAAGCAACAAAAA        GCTCCCGCA GGTATCAAGT TGCGGGAGT         GTGCGAATAAAACAG  78 41
CH53_RS21360 4766591 .. 4766632 - -16.1  -4.41237   AGGAAATAACAGAAA CCGCAGTTTTTGGTTCC GTTGATCG GGAATCAAAAACTGCGG  AAAACACACTAGTAA 100 53
CH53_RS21355 NONE
CH53_RS21350 NONE
CH53_RS21345 4764299 .. 4764325 -  -7.4  -5.66868   AATTAATTAAAAAAA         GACCGAATAC GATTCCT ATATTCGGTC         TAGGGAAATGGCTCT 100 261
CH53_RS21310 4759179 .. 4759191 -  -4.1  -3.45757   CATAAGCCAAGAAGA                TCCAG ATC CTGAA                AAGTCACACTCTTCC  52 361
CH53_RS21300 NONE
CH53_RS21295 NONE
CH53_RS21290 NONE
CH53_RS21285 NONE
CH53_RS21280 4752846 .. 4752857 -    -3   -3.9122   GATTTCTTTAAAGAA                TTCT CTGT AGAA                 AAAGGGAATTTCAAT  54 207
CH53_RS21265 4751327 .. 4751345 -  -5.9  -2.50994   GCCAAGGTTAGCAAT             GGCGGCA GCTAT TGCCTCC             GGCCCCGCCGCCGCG  50 37
CH53_RS21970 4750212 .. 4750231 - -16.4  -2.96882   GTAAATATACAATTA            GCCGGGCG ATAG CGCCCGGC             ATTGTTACTCTGGTA 100 30
CH53_RS21250 4747279 .. 4747295 -  -2.9  -3.95724   AGAAAAAATACATAA              TTGTCCG CTT CGAACGA              AGAACGGAAGTTCAA  53 49
CH53_RS21960 4744082 .. 4744101 -  -5.6  -2.75064   CGCGCCAGTGAAGCA            TCACGGAC ATTA GCCCGAGA             AAATCCATCGCTTTT  49 457
CH53_RS21225 4742663 .. 4742681 -   -16   -2.8136   AAGCTTAATAAATAT             CCTCCGGC ATA GCCGGAGG             TTTTTCATATGCGCC 100 106
CH53_RS21215 4740116 .. 4740136 -  -6.7  -3.31802   CAAACGACCATAATA            GGGCGTAGC ATC GTTGCGCCC            TTTCCTACTGAGGAA  62 525
CH53_RS21205 4738067 .. 4738083 -  -3.7  -3.05616   TATCACCATACAAAG              TCAACAT TGT ATGATGA              ACAGCAACAATATTT  47 114
CH53_RS21195 4737168 .. 4737185 -  -5.5  -2.88861   CATGACTTGCAGATA             CCGGG TAATTAAG CCCGG              TTTTGTATTTTACGC  52 35
CH53_RS21185 4734951 .. 4734969 -  -7.4  -3.53012   GTGTTCCCTCCCAAA             CCCTGC TGAAATC GCAGGG             TATTGGATAGGACCG  66 343
CH53_RS21165 4731021 .. 4731036 - -10.4  -4.57353   TTTCATCACATAAAA              CTCGGC CACC GCCGAG               TTTACATGCTCAAGT  91 68
CH53_RS21160 NONE
CH53_RS21155 4729076 .. 4729101 -  -2.5  -2.52015   CTGATAGTGACCAAT         CTAATTGAGTG GCTT CACCCCGTTAG          TTTTTGGTATCTGAA  41 186
CH53_RS21140 4727110 .. 4727124 -  -8.6   -3.4706   AACAGCGACAATTAA               TCAGCA GCT TGCTGA               TCATCTAAAATCGTC  72 7
CH53_RS21135 4726258 .. 4726278 -  -3.2  -3.29511   CCTACTTTGGCACAA           GGTGAGGGC GCGC GCTC-CACC            TTCCGTTTTATTCCC  48 42
CH53_RS21130 4725652 .. 4725666 -  -2.2  -2.79952   AGACTAATTTAATGA               TACTTT CAC AAAATA               ATACTATCTGTTATG  41 29
CH53_RS21125 4724348 .. 4724366 -    -3  -2.64803   TCAGCCCCAAATCCA             CCTCTCAG TTA CTGTGAGT             AACAGCAGCATCTTG  41 11
CH53_RS21120 4723564 .. 4723600 -  -7.5  -2.79004   GTACGGGGAAAACAT   TCACCACGC--AGCATG GCTTG CATGCTTAGCGTAGTGA   CGTGGTGGGCGGGTT  60 63
CH53_RS21115 4722356 .. 4722366 -  -6.8  -2.50492   CATTATGATCAACAT                 CAGG ATG CCTG                 GGTGATGAGGGTAAC  56 168
CH53_RS21095 4717291 .. 4717304 -  -2.3  -3.06261   GCTTAACGCTGAAGA               GCCTA AGGA TTGGC                GCAATTGGGGGACAG  42 132
CH53_RS21080 4712720 .. 4712739 - -12.2   -3.1552   GCGCAGGCATGAACA            GGCGTCAT TATA ATGACGCC             ATCAGCAATTGCCAC  83 53
CH53_RS21075 NONE
CH53_RS21070 4709835 .. 4709856 -  -8.7  -5.91981   AAAACGCAAAAAAAA           TCCGGGC TCGTTAAG GCCCGGA            TCCTTCATATTGTCT 100 47
CH53_RS21065 4708643 .. 4708660 - -12.7  -5.24129   GGCTGCCATAAAAAA             CCCCGCT GGCG AGCGGGG              TTTTCAATCAGATGA 100 52
CH53_RS21055 4705765 .. 4705789 - -15.9  -2.92777   TTGCAGACAGCAAAT          TAGCCTCTTTC CAT GAAAGAGGCTA          GTGCAAAATTTAACT 100 39
CH53_RS21050 4704713 .. 4704734 -  -3.6  -5.75945   ATTTGCCAAAAAAAA           TGGCCCCT GGTTAA AGGAGCCG            TCCGGTGTGGGAAGG  87 116
CH53_RS21045 4703562 .. 4703583 - -10.2  -3.93695   GTCATTATTCAGAAA           GCCAGTCA GTAAAA TGACTGGC            TTTCTGCGTTTAAAC  84 70
CH53_RS20990 4691155 .. 4691167 -  -3.3  -3.83026   CTGCCTCACAGTAAA                CCGCA TCC TGAGG                TATATCTAAATGCTG  55 293
CH53_RS20980 4689879 .. 4689906 -  -3.4  -4.76644   AATAGGCAGTAAAAA        GGCCAAAATGCTG CTC CA-CACACTGGCC        TGTTTATGCATCTAT  67 87
CH53_RS20975 4688557 .. 4688574 -  -7.7  -3.57144   CCCTCCATCGTCAAA             GGTGGAA AGGT CTCCACC              ATTGTGCCGATGTGT  66 286
CH53_RS20925 4676996 .. 4677006 -  -2.6  -3.29511   TGTATGGGCGTACAA                 TTTA TTA TAAA                 TGGCATACTGGACAT  47 165
CH53_RS20915 NONE
CH53_RS20910 4675303 .. 4675313 -  -3.2  -2.95081   TGATGCAAAAGATTA                 CAGA CGA CCTG                 TCAACTCTCGAACGT  45 240
CH53_RS20860 4664259 .. 4664284 -    -4  -2.68821   AAACAACCGATAGGA         GGGTTATCTC TGCATT GGAATAACCC          ATACAGGCAAGTCAA  45 44
CH53_RS20855 4663034 .. 4663051 -  -9.9  -3.73816   AATACTACAGCCAAA             CGGTGAT AATG ATCACCG              ACAAAGTTATCGAGC  79 420
CH53_RS20845 4661226 .. 4661254 -  -6.8  -5.27335   TTGGCGAAAGAAAAA        GGAATGGAGT GAAAAAGGT ACCCCATTCC        CTAATCCTGCTCCTG  89 105
CH53_RS20725 NONE
CH53_RS20720 4647705 .. 4647735 -  -5.5  -2.83522   AGCCTTTCAGCAAAT      GACTTGTTAACGGC TGCT GCCATTACCA-GTC       CATCAGGTGAGTCAG  52 113
CH53_RS20715 NONE
CH53_RS20710 4645458 .. 4645472 -  -3.5  -2.71144   GATTTCCTCGAATTA              GC-GCC AGTT GGCAGC               CTGTTTAGGCTCATT  43 8
CH53_RS20705 NONE
CH53_RS20700 NONE
CH53_RS20695 NONE
CH53_RS20690 4643691 .. 4643701 -  -2.4  -3.13403   TGGCGCGCAGCAATA                 CCGG TAC CGGG                 TCATATGTGGGTATT  43 61
CH53_RS20685 NONE
CH53_RS20680 NONE
CH53_RS20675 NONE
CH53_RS20670 NONE
CH53_RS20665 4640971 .. 4640988 -  -9.1  -5.65927   GAGCTAAATAAAAAA             GGCCCAC CGAA GTGAGCC              TTAAAAGTTGGTATG 100 431
CH53_RS20660 NONE
CH53_RS20655 NONE
CH53_RS20650 4639374 .. 4639389 -  -6.1  -3.77196   CCAGCACTTACCAAA              CTCGC GGTTTA GCGAG               TTATCACCAAGACTA  64 322
CH53_RS20645 4639000 .. 4639021 -  -8.7  -5.45652   ACTGCCAATAAAAAA           GGCCCAGTC GCTA AACTGAGCC            TTCATGTTCTTTGTT  95 165
CH53_RS20640 4637943 .. 4637971 - -10.4  -3.17212   GCACGATTTGATTAA        TTGAGAGCCGTT GTGAA AATGGCTCTCAA        TCCTGTTATTCCGGC  75 207
CH53_RS20635 4637554 .. 4637567 -  -4.5  -5.68489   TATAACAATAAAAAA               CCCAC CGAA GTGAG                TTTTATTGAACAGCT  89 56
CH53_RS20630 NONE
CH53_RS20625 NONE
CH53_RS20620 NONE
CH53_RS20615 NONE
CH53_RS20610 4632219 .. 4632238 -  -8.5  -5.12068   GACAGGTAATAAAAA            GCCCCGC ACAATG GCGAGGC             TCAGTTTTTTTGTTT  90 81
CH53_RS20605 NONE
CH53_RS20600 4630194 .. 4630207 -  -9.5  -3.62054   ACTCCAAATAAGGAA               GGGGC CGAA GCCCC                TTGATAATTAGCCCA  79 33
CH53_RS20595 NONE
CH53_RS20590 NONE
CH53_RS20585 NONE
CH53_RS20580 NONE
CH53_RS20575 NONE
CH53_RS20570 4627806 .. 4627819 -  -9.5  -5.71712   TTGGATATAAAAAAA               CCGGC ATAG GCCGG                TGATGTGGGATTGAT 100 47
CH53_RS20565 NONE
CH53_RS20560 NONE
CH53_RS20555 NONE
CH53_RS20550 NONE
CH53_RS20545 NONE
CH53_RS20540 NONE
CH53_RS20535 4621287 .. 4621297 -  -5.4  -3.86897   CGCACTCTTCATAAA                 GCAT CTA ATGC                 TCCTTGTTCAAGGCA  63 98
CH53_RS20530 NONE
CH53_RS20525 4619558 .. 4619573 - -10.4  -4.28791   AACGCATAACAGAAA              GCCCAC CTGA GTGGGC               TATAATGCAAAAACC  89 66
CH53_RS20505 4617012 .. 4617027 -  -6.1  -4.85195   AAAACAACGCAAAAA              CCCAC AGTTAA GTGGG               TTGGTTAATTGTCAC  82 30
CH53_RS21940 NONE
CH53_RS20495 4615615 .. 4615630 -  -4.6   -5.4505   TTCTCCAATAAAAAA              GGCCGC CTGA GCAACC               TTGTATGATGTTTAT  86 49
CH53_RS20490 NONE
CH53_RS20485 4614392 .. 4614406 -  -7.8  -5.64274   TCACCCATAAAAAAA               CCCACA TTT CGTGGG               CATTGGCGTGTTTAT 100 358
CH53_RS20480 NONE
CH53_RS20475 4610063 .. 4610074 -  -4.4  -2.64679   AGCAATGCCAAATAT                TGGA TTAT TCCA                 TTGAGTACTTGTACC  47 117
CH53_RS21935 NONE
        thrS 4606089 .. 4606114 -  -9.9  -3.32022   CTTCTCATAGAGGAA         TTTGCCGTAATC CAT GAT-ACGGCAAA         CCGGCGGCTCGGCAT  75 219
CH53_RS20460 4605709 .. 4605737 -  -3.8  -3.06492   CTAGCTAGGCGAACA       GACCCCTACTCTG CAAG CAG-GAAGAGGCC        TATTACTTGAGTGCC  47 41
CH53_RS20455 NONE
        rplT 4604885 .. 4604902 -  -8.4  -5.95286   AGTAAAAACAAAAAA             GCCTCC ACGATG GGAGGC              TTAGGCGCTATTTTT 100 189
CH53_RS20445 NONE
        pheT NONE
        ihfA 4600879 .. 4600894 - -11.8  -5.42164   TACAAATAAGAAAAA              GGCCGC TTAC GCGGCC               TTTTGTTTGAGTAGA 100 44
CH53_RS20430 4599346 .. 4599383 -  -8.4  -4.38712   TTTACTGGGAGAAAA   CGCTAACTGAGCCGCT GATTTT AGAGGCAAAGTTAGCG    TTCATCACGTATTTG  85 44
CH53_RS20425 4598181 .. 4598203 -  -4.9  -2.98651   AAGAAGATAAAATAG           GTGTAAGGT CGATC ACTTTACAC           TTTTCACTCGTGTCA  51 15
        btuE NONE
CH53_RS20415 4596778 .. 4596790 -  -2.7  -3.34646   AACTTGATAAATAGA                TGTAA GCG TCACA                TGCTTTTTGTAACAA  46 21
CH53_RS20410 NONE
CH53_RS20405 NONE
CH53_RS20400 NONE
CH53_RS20395 NONE
        arnT NONE
CH53_RS20385 NONE
CH53_RS20380 4588891 .. 4588918 -    -4  -3.06831   GTAAGGCTTAGCCAA        TGCGCCAGACAG CAAG CTATTCGGCGCT         ACATCTGGCTAGAGA  47 110
CH53_RS20375 NONE
        lplA NONE
CH53_RS20365 4585720 .. 4585751 - -16.8  -3.25823   TTGTGCCCAGAGGAA      TA-CGATGGCAGGGA ATA TCCCTGCCATCGATA      GTGACTAACTGGAGC 100 30
CH53_RS20330 4576331 .. 4576350 -   -10  -5.44721   ATTATTGCAAAAAAA            TCCGCAAC CTAC GCTGCGGA             TAATTAAATGTTCCT 100 64
CH53_RS20320 NONE
CH53_RS20315 4570778 .. 4570802 - -13.7  -2.55213   GAGCGATTGAAGCCA          CTCAGGATCAT TAA ATGACCCTGAG          TAGACTAATCACGAA  91 54
        sufA NONE
CH53_RS20305 NONE
        sufC NONE
CH53_RS20295 NONE
CH53_RS20290 4564941 .. 4564962 -  -8.7  -3.16881   TACGCATGGGATTAA           GGAGCCTCA CCTT TGAGGCTCA            CCTTGTGGCTAGCAT  68 144
CH53_RS20285 4564247 .. 4564263 -  -7.3  -3.23492   CACCATATAGTAACA              GCCCTTA TTA TAAAGGC              AATTTATATCTCTAA  63 188
CH53_RS20280 4562797 .. 4562815 - -14.6   -5.0925   CCTGAAAATGAAAAA             TGGCGCAC ATT GTGCGCCA             TTTTTTTTACCCCGC 100 174
CH53_RS20245 4557180 .. 4557209 -  -5.1   -4.4267   CGTTAAAAGTGAAAA       TAGGACAGG TATATTGACTCC CCTGTCCTA        TTCTTAATCACTTTA  68 59
CH53_RS20230 4552767 .. 4552779 -  -2.7  -3.80516   AAGCAATGCATCAAA                TTCTG ACA CAAAA                GCATCGCCCAACAGC  54 377
CH53_RS20210 4548852 .. 4548869 - -12.7  -5.03314   TTTACTTTCAAAAAA             GGTGGCC CAAA GGCCACC              TTTTTATTTTTCACT 100 56
CH53_RS20180 4543302 .. 4543319 -  -4.1  -2.98145   AACCATCAATTAAAG             GCCAAAC GGGG GCTTAGC              GCTAAAATAGCCAGA  47 73
CH53_RS20175 4542283 .. 4542311 -  -9.6  -5.13722   CCGAGGAAAACAAAA        CTGCGCCAGC CTGAGCTTT GCTGGCGCAA        AGATAAGGCTTAAGG  93 35
CH53_RS20155 4538477 .. 4538501 - -14.4  -4.18018   TGTTTTTATGTAAAA          GCCAGAGTTC GTAAT GAACTCTGGC          TTTTTATTACTACAA 100 80
        anmK 4536376 .. 4536386 -  -3.2  -3.67597   TCGTTGATGGAATAA                 GGCA CCG TACC                 CTATGGCAGCTTAAC  52 45
CH53_RS20140 4535970 .. 4536011 -  -5.3  -2.96873   ACGCGCAGGAAAGCA GTGATCATTATTCT-GCCCT CGC AGCGCAAGAATCACAATCAC TCAGAGCGGACAACA  51 47
CH53_RS20135 4535241 .. 4535259 - -12.4  -4.39329   AGGGTATAGAATAAA             GCGCCCGT CAC ACGAGCGC             TAGGCTTAACCACAA 100 55
CH53_RS20130 4533668 .. 4533689 -  -9.5  -5.11613   ACATTAGCCAAAAAA           TAAGGGACA TTTC TGCCCCTTA            TTTTATTTCATTCTT  93 39
CH53_RS20125 4532679 .. 4532700 - -11.6  -2.93901   AGTTGATTAATTAGA           GTGCCCCT GCATTA AGGGGCAC            TGTATAGCAGGGGTT  81 39
CH53_RS20105 4530104 .. 4530151 -  -6.3  -2.57881   TAACCGCCGCATAAT TGCCCGGCAGGATAAAGCTCGC GTTCT GGGCGCTTTATCCTGCCAA-CT CCCACGTAAAACTCA  54 83
CH53_RS20095 4527119 .. 4527131 -  -4.8  -3.15249   GATACGCGCCAGCAA                CTGC GGATT GCAG                CGTTTTAGTGGGTCG  53 30
CH53_RS20055 4518828 .. 4518841 -  -2.4  -3.12529   TCAATTTAATATACA               GTCT CATTGT AGAC                ATCCTATATTCAAAG  43 35
CH53_RS20050 4518276 .. 4518292 -  -5.9  -2.52623   GTGGTTGCATAACAG              TGAACAT CAG ATGCTCA              AATTAGCCTTAGAAC  50 208
CH53_RS20040 4516418 .. 4516449 -  -9.4  -2.73364   TTCGCATTTTAATTA      TGGCAGGCCGCT TTATTCCC AACGGCCTGCCC       GGTATATATTCGCTA  70 95
        pspB NONE
CH53_RS20030 NONE
CH53_RS20025 NONE
CH53_RS20020 NONE
CH53_RS20015 4512986 .. 4512996 -  -4.6  -3.29324   GGCACTGAAACTTAA                 CCCG TTA CGGA                 TTGGCTTTGTCTTTT  52 19
CH53_RS20000 4510010 .. 4510034 -  -7.8  -4.30416   AGCATTAACTCAAAA         CGGCTG-GCCC ATTT GGGTACAGCCG          TTTTTCATTACAAAC  77 70
CH53_RS19990 4507948 .. 4507958 -  -6.8  -5.00616   TTTCCCGGCAAAAAA                 CTGG CAG CCAG                 GCGAGACGGTTTATC  83 405
CH53_RS19980 4505523 .. 4505544 - -12.3  -5.34309   ATTATGAAATAAAAA           GCCGCCAAT TAGC ACTGGCGGC            CCAACGGCCAGAAAT 100 50
        zntB 4504100 .. 4504124 - -17.3  -5.68039   AAATGCATAAAAAAA          TGCCGATGTTG AGA CAACATCGGCA          TCGTAACAATTATGT 100 223
CH53_RS19970 4502887 .. 4502908 - -10.1  -3.41051   TTATCCGCAGGATAA           CAACGCCTC AATC GGGGCGTTG            TACTGCGGTTTTTTA  77 159
CH53_RS19960 4498481 .. 4498498 -  -7.7  -3.91027   CAATTAGACATTAAA             TAGCGCC AAAG AGCGCTA              GCCTACGTTTCAGTG  73 124
CH53_RS19950 4497052 .. 4497079 -  -3.3  -3.08679   GTTTCTGACCGAAGA        GGCGCTGACCA GTATTT CGGCCACCACC         ATGCAGAATATTGCC  45 201
CH53_RS19940 NONE
CH53_RS19935 NONE
CH53_RS19930 4492335 .. 4492360 -    -4  -3.91897   GGGGGCATTCATAAA         GACACC-CCAA CGGAT CTGGTGGTGCC         TTACCTGCGTCTGTT  57 354
CH53_RS19920 4487588 .. 4487623 - -11.4  -3.14134   AGAGTCAGTAAGATA    CTCCGCA-GCTAAAT CAATAAT ATTTAGCGTGCGGAG    GAATTTTAATCGCTA  82 42
CH53_RS19915 NONE
CH53_RS19910 4486308 .. 4486330 -    -4  -4.21933   TTAATCGTAAAATAA           CTCAAGCAGG CTA CCCGCTAGAT           CATCTTGAAACCCTA  62 331
CH53_RS19880 4480182 .. 4480195 -  -2.3  -4.10855   AAAATTGCCTTAAAA               CGTCA CGAT TGGCG                TTTGATTATTGCTGC  55 371
CH53_RS19865 4477321 .. 4477334 -  -3.8  -3.04144   TGCTTACCTGCAACA               CCCA TTAATT TGGG                CATGCTTCAGTTCTC  47 83
        pntA NONE
        pntB 4474162 .. 4474188 - -12.3  -5.01811   TGATTAAACCAAAAA         GAAGGGCCACC GCATA GGTGGCCCTTG         ATCTGATTCGTTATA 100 46
CH53_RS19835 4470647 .. 4470663 -  -3.7  -2.61548   TGCCATCACAACTTA              CTTTGAA TAA TTCAATG              TTTCTAATACCTGCG  45 6
CH53_RS19830 4469942 .. 4469957 -    -4  -3.33162   GATCTTACGCCACAA              CTGTAC ATTT ATACAG               TATATCGAGATTTTA  50 51
CH53_RS19825 4469369 .. 4469396 - -14.8  -2.52543   AGTGTTGCCAAGGTA        GGCAGCCGCGCC AACC AGCACGGCCGCC         ACCTATTATTGTGCT  95 31
CH53_RS19815 4467301 .. 4467311 -    -4  -3.53779   GTTGTAAAACAGTAA                 TACA ATT TGTA                 TTGATTGGTTACAAC  52 143
CH53_RS19810 4465770 .. 4465792 -  -4.1  -5.05505   AGCAGAAACTAAAAA           TCCCGGC CATCACGGC ACCGGGA           TTATTCAGTAAATTG  74 74
CH53_RS19805 NONE
CH53_RS19800 NONE
CH53_RS19795 4462244 .. 4462255 -  -5.8  -3.83409   GCATACAGTATTAAA                CCAC CCCA GTGG                 TTACGCTAAAATGGC  63 9
CH53_RS19785 4460392 .. 4460419 -  -3.4  -2.94454   GCAATAAATCAATTA        TGCCAGTTGATT ATGC ATTCAGCTAGCA         AAGACTATGCAACCA  45 20
CH53_RS19780 NONE
CH53_RS19775 4456975 .. 4457005 -  -9.8  -3.31854   GAAGCATAAGTAACA       GGCTGTTATCAATA ATA TATTGTTAACGGCC       TTTTAAAATAAGATA  75 50
CH53_RS19770 4456429 .. 4456460 - -11.5  -3.54129   GACAGTCGTTGTAAA      CCCGTACTTCCGC TAACCG GCGGCAGTGCGGG       CTAGCTGCATTTTAG  88 37
CH53_RS19755 4452958 .. 4453002 - -15.9  -2.53273   GTAAACCATCAATAT CAGTGGCTGCTATTCCCCT TTAAATC AGCGGAATAGCAACCACCG CCATATTAAATTCAA 100 37
CH53_RS19735 4444346 .. 4444377 - -12.4  -2.80816   TGGTCATCGAGCATA      GCCGGCAAAATATC GATT GATACTTTGCCGGT       TTATTGCGTGATGAG  83 42
CH53_RS19725 4442213 .. 4442235 -  -2.9  -4.90917   AAACTGAATGAAAAA          GT-TAATCAT TGTG ATGATTACAC           TCTTGCTGATTGCTT  68 180
CH53_RS19715 4439928 .. 4439947 -  -2.9  -3.15909   GCAAGTAATAGAAAC            TGCAATT AATAGA AATCGCA             AATATTAGAAACGAA  44 30
CH53_RS19710 4439058 .. 4439068 -  -2.4  -4.56597   CCTGTCGCTGAAAAA                 CCGG TGC CGGG                 CGCGTCAGTCATCGT  61 77
CH53_RS19705 NONE
CH53_RS19700 4437568 .. 4437583 -  -2.6  -4.36914   TCCGGGTCGATAAAA              TC-GTCA CCC TGACTGA              ATTGCAAACCATCAA  62 65
CH53_RS19690 4435574 .. 4435585 -  -7.2   -4.4267   GTTTAAAACCGAAAA                CGGC CCTC GCCG                 CTGCCGCAGGTCTTG  76 463
CH53_RS19675 4431591 .. 4431637 - -11.3  -3.08317   AGCGATAAAGTAAAT TCGA-CTAGAAAAGGCGATAAAC TTG GTTTA-CGCCTTTTCTAACTCAA GTGAATATCGCTAGC  81 85
CH53_RS19660 4428701 .. 4428711 -  -3.2  -2.82933   TTTTAATTCATCAGA                 GACA AAT TGCC                 TTACCGCCCGGCGCT  44 10
CH53_RS19655 NONE
CH53_RS19650 4426433 .. 4426452 -   -10  -3.53563   ATATCGCCCCCGAAA            GGCAAGAG TTCC CTCCTGCC             TTGTAAATGTTTATA  79 43
CH53_RS19645 4425075 .. 4425099 -  -7.1  -4.07885   GATCTCTCGTTAAAA          TCCCAGCAACC GTT GCCTGCTGAGA          TTGTTATTAAGCCTT  73 56
CH53_RS19640 4424591 .. 4424607 - -12.3  -5.03994   TGCCATACACAAAAA              GGAGCAC TCA GTGCTCC              CTTCTGGCGCTATCT 100 43
CH53_RS19635 4424006 .. 4424031 -  -5.5  -3.76839   CAAGTGGAATTTAAA         GCATCGAACG GGTTAAT CGT-CGATGC         TTTTCTTTACCTTTA  60 38
CH53_RS19625 4421885 .. 4421895 -    -4  -3.08679   CTGGGGTAGCTAATA                 CATA ATT TATG                 CAATTATTTGGCCCA  47 21
CH53_RS19605 4417341 .. 4417365 -  -8.5  -3.51232   TGGCGGGTAAATTAA          GGGTGGGGC GGTGATG GCCCCAGCC          AGATTTTACCCGATA  72 51
CH53_RS19590 4415246 .. 4415258 -  -3.3  -3.19463   CTCATTACGGATTAA                TCTGG CGG CCTGA                TAGCCGATCCAGGCA  46 2
CH53_RS19585 4414836 .. 4414857 - -10.1  -4.02581   TTTGATAAAACAGAA           GGGTGCACC GAAA GGCACACCC            AGACTGGTGACGGCG  86 44
CH53_RS19580 4413107 .. 4413119 -  -5.5  -3.02166   GTCGGAATTAAATTA                GGCTG TAT CAACC                ATGCATTATTAACAG  51 298
CH53_RS19560 4408541 .. 4408551 -  -2.6  -4.03104   TAAATGAAGAAAATA                 TTTT CGT AAAA                 ATCCCTAAATACGTT  55 170
CH53_RS19555 4408121 .. 4408134 -  -6.7  -3.47029   TGAGGCAAATATCAA               GCCAA TGCT TTGGC                TTTCAACTGCTGGTA  64 8
CH53_RS19550 4407029 .. 4407048 -    -5  -3.01791   ACTGGTGGGTTAATA            GGGCATTA ATAT CAATACCC             CAGACAGATAATCAG  51 37
CH53_RS19545 4405829 .. 4405849 -  -8.2  -3.39261   CAAACAAACGATTAA            CGCCGGTC CTTAT GACTGGCG            TTTTTTACAGATACA  66 105
CH53_RS19535 4402905 .. 4402921 -  -3.7  -3.43676   GCCAGTAATTGACAA              CAAAATG AGT CACTTCG              TTCAGTCTGCGTTGT  50 27
CH53_RS19530 4401077 .. 4401097 -  -9.7  -6.08563   AATAGATAAAAAAAA            CGGAGCC ATCATCA GGCTCCG            TTTTACATTTTATGG 100 48
CH53_RS19525 NONE
CH53_RS19515 NONE
CH53_RS19510 4396061 .. 4396084 - -13.2  -4.07868   GGATAGGGAGATAAA          CGCCACTCAA GGGA TTGAGCGGCG           TGATACACGATATTG 100 47
CH53_RS19505 4395185 .. 4395199 -  -8.6  -3.02698   TGAGTGGACACAAAG               CCGTTT GCC AAACGG               GGCTATTCATACGCC  67 78
CH53_RS19495 4392217 .. 4392230 -  -5.3  -5.24129   GCGTTGCATAAAAAA               GTGAT GTAA ATCAC                TAATTGTTATGGCGG  83 83
CH53_RS19490 4391068 .. 4391094 - -13.8   -5.4505   GCTGGCAATAAAAAA         CGCCCGTACTTC TAT GAAATACAGGCG         TTTTCCGTTAATTTC 100 49
CH53_RS19455 NONE
CH53_RS19450 4379955 .. 4379976 - -12.3   -4.3739   CATTTTGTCATAAAA           CTCAGGAGC CGAA GCCCCTGAG            TTGGGTGTTTAAATC 100 124
CH53_RS19425 4370370 .. 4370400 -  -7.7  -3.75105   GTAATCTATTAATAA       GAAGTGATAACAA CCGAT TGGTCATCACTTC       TTTGTATTGAGCTAG  70 37
CH53_RS19420 4369800 .. 4369825 -    -9  -5.55855   CCTAAAAAAATAAAA         GCCGCCTATT ATCCAA AATTGGCGGC          CTAACGACAACAGAT 100 100
CH53_RS19415 4369202 .. 4369220 -    -6  -3.46117   ACGACATCATTAGAA             CTTCACCA ACC CGGTAAAG             CCCATAAAGGCCAAT  62 1
CH53_RS19410 NONE
CH53_RS19405 4366215 .. 4366245 - -15.5  -3.15544   TCTGATGTTGACGAA       CTGATGCTCTGCC GCCAT GGCAGAGCGTCAG       TTACGTGTGTTTCGT 100 42
CH53_RS19395 NONE
CH53_RS19390 NONE
CH53_RS19385 NONE
CH53_RS19380 4361609 .. 4361620 -  -7.2  -3.14878   GCGTCTAATCGAATA                CCGC AATC GCGG                 CATAGAGGAGATTTA  63 174
CH53_RS19375 4359182 .. 4359198 -  -7.9  -3.12847   AACAAACTCAGGCAA              TCCGCTG TGA CAGCGGT              GGTTGCCAGCGTCGA  65 1
CH53_RS19370 4356889 .. 4356916 -  -7.8  -3.16068   GGGGCAATTGAAAAG        GCCGTGG-GAT GTTGTGT ATCACCACGGC        TTATACTTGTCATAC  65 166
CH53_RS19365 NONE
CH53_RS19360 4354215 .. 4354239 - -16.5  -5.21236   AACGGATAATAAAAA          CGCCCTGTGAA GTA TCCACAGGGCG          TGACAATGTCACTTC 100 62
CH53_RS19350 NONE
CH53_RS19345 4352057 .. 4352071 -  -2.8   -4.6856   CAAACACGGTAAAAA               TGCC TATTACG GGCA               ATAATCGCTGTTTGG  65 76
CH53_RS19335 4350624 .. 4350668 -  -3.6  -4.88067   AGTGACTGAGAAAAA TTGAGGTTGCAGGTA-GCAAG CAAG CTAACACCCCTGCAACGTCAA GTAAAATAGGCTAGG  70 41
CH53_RS19320 4348855 .. 4348870 - -10.4  -4.62069   TGGGCACGGCAAAAA              GAGCGC AAAT GCGCTC               TTAGAGTGAGATAAA  91 63
CH53_RS19315 4348388 .. 4348409 - -10.2  -3.55866   GCAGATGGAAAGTAA           TCGGGTGA GTTGAG TCACCCGA            TTGGCAGAACGTGTT  79 64
        ribA 4344937 .. 4344956 -   -10  -5.06414   CTTGTTCAATAAAAA            GGGTGGCT GAGA AACCACCC             TTTATTGTCTTTGAA  93 50
CH53_RS19270 4336112 .. 4336134 -    -9  -4.20516   TTTTTAGTGAAGAAA           GGCAGGGGGC TTA GCCCCCTGTT           TTTTGTGGCTAAACG  85 73
CH53_RS19260 NONE
CH53_RS19255 4333448 .. 4333472 - -11.5  -4.19817   TCTATCTAGCGAAAA          TGCCGCAGA TATTACC TCTGCGGCA          CCTTATTGATTTGCA  93 54
CH53_RS19245 4328915 .. 4328925 -  -3.2  -4.47707   GCTGATCAAAAATAA                 TACC CCT GGCA                 ACTACACCTTTATAT  63 444
CH53_RS19230 NONE
CH53_RS19225 4325036 .. 4325054 -  -4.6  -3.40867   CCAGCGAGTAACGAA             TGTAGC TAGCACC GCTACA             GCTTCATATGTGGCG  52 21
CH53_RS19220 NONE
CH53_RS19215 NONE
CH53_RS19210 NONE
CH53_RS19205 4320511 .. 4320523 - -10.5  -3.55866   TGATAGTGAAATTAA                CGGCG AGT CGCCG                CTTTCATTTCGGTCA  79 9
CH53_RS19200 4319899 .. 4319919 -   -14  -3.53012   GGGGGGGCCTGCAAA            GGAGGCGC GCAAA GCGCCTCC            GATAAGGGGATTATT  95 36
CH53_RS19190 NONE
CH53_RS19185 4317538 .. 4317564 - -15.3  -2.73443   CGAGCATTAGATAAG         CAAAAAGGGCC GTAAT GGCCCTTTTTG         TTTTTATCTGAAGGG  95 45
CH53_RS19175 4314940 .. 4314994 -   -13  -3.51909   TAAGCATAAAATATA CCAACGTCATTGAGGCC-CCTGC-GG TGTTG CCTGCCTGTGGCCTCAATGATGTTGG GGGGTATTATTTAAA  95 41
CH53_RS19170 4314362 .. 4314386 - -10.8  -4.90079   ACCGTAATAAGAAAA         GGGTCGCTCTT ATGC AAG-GCGACCC          TTTTTTGCGTCAGGA  93 57
CH53_RS19160 4312738 .. 4312750 -  -3.4  -5.10461   CGCATTTAACAAAAA                TGAC TTAAC GTCA                CGATAGAAAAATCGA  72 170
CH53_RS19155 4312374 .. 4312393 - -12.2  -4.16785   ACAGCATAAATCAAA            TACGCCTG TGTT CAGGCGTA             TGATCACGTTAGGTA  95 76
         cls NONE
CH53_RS19135 4308167 .. 4308190 - -14.6   -4.4261   CGCCCAATAGCAAAA          TCCCCGCCAG AGAA CTGACGGGGA           TTTTTGTCATTACAG 100 75
CH53_RS19095 4295768 .. 4295793 - -13.3  -4.98911   GATTATAAAAAGAAA         CCCCCAACAGC AATG GCCATTGGGGG          CTATATCTTCCGTTG 100 77
CH53_RS19085 4294456 .. 4294474 -  -7.4  -3.46824   TCATTAATGAACCAA             TTGCCATG TAC CCTGGCAA             ACCCTATCGCCAGGT  66 140
CH53_RS19080 4293531 .. 4293554 -  -4.6  -5.51402   ATAGAGGCAAAAAAA          TACCCCCCGTA TAA TA-GGAGGGCA          TTTTTATCATAATAG  86 58
CH53_RS19060 NONE
CH53_RS19055 4286838 .. 4286851 -  -3.1  -3.88232   GCGCTTACAGAATAA               CAGTA CGGT TACCG                TAAACAAAAACACGT  54 1
CH53_RS19050 4286562 .. 4286574 -  -6.3  -2.53911   CTAACGCTGAATCGA                CTTGA GAC TCAAG                GATAAAAATGGTGGT  54 34
CH53_RS19045 NONE
CH53_RS19035 NONE
CH53_RS19030 4282397 .. 4282411 -  -7.2  -4.25104   CTGTGTGTATCAAAA               TCAGAA TTA TTCTGA               AGGTGCTGTATTGCG  73 130
CH53_RS19005 4276344 .. 4276361 - -10.5  -5.52384   TGGCGAGGAAAAAAA             GCCCGAC AGAT GCCGGGC              GGAGTTTTTTGATTG 100 46
        ansA NONE
CH53_RS18995 4274551 .. 4274570 - -10.7  -3.39717   ATTTATCAACATTAA            CGGAGCC GAGTAA GGCTCCG             TTGGTTATGTTTTTA  80 48
CH53_RS18980 4272254 .. 4272269 - -10.4  -5.72622   GCTACAAATAAAAAA              GCCACC CGAA GGTGGC               TTTTGACAGAAATCT 100 55
CH53_RS18975 4271186 .. 4271202 - -10.1  -5.28176   TTGAGTCATAAAAAA              TGGGGCA TCG CGCCCCA              TTTTTGTGCCTGATG 100 53
CH53_RS18965 4267833 .. 4267847 -  -5.7  -3.56568   CAAGCAGCGTTCAAA               TCTGC TCCCG GCAGA               TTTGTCACCTGAATC  58 203
CH53_RS18960 4266345 .. 4266383 -  -4.5  -4.77157   TTAACCCATGAAAAA   GCCGGGAAACCATTCCT GTAAT AGAAAAAGTTGACCGGC   TAATTTTAATATTAA  72 37
CH53_RS18955 4265111 .. 4265135 -  -4.9  -3.76952   TCCATTGAAGCCAAA          CGACCGCTGTT AAA ATCAGCGATAG          CGCCGGTTATCTGCT  58 134
CH53_RS18950 4261851 .. 4261867 -  -4.5  -4.98911   CAGCAGAAAAAGAAA              TTTTTGC ATA ACAAAAA              AACAACATCCAGATT  74 184
CH53_RS18945 4260183 .. 4260197 -  -4.2  -3.60792   TGCGTAATCCCGAAA               CCCACT ACG ATTGGG               TGCGGCCAGGTATTA  52 494
CH53_RS18930 4255967 .. 4255983 - -12.3  -4.31688   AATAGTAACGTAAAA              GGGGCAT TAA ATGCCCC              TTTTTCATGGAAAGA 100 86
CH53_RS18920 4253265 .. 4253278 -  -2.4  -3.01712   TTCTCGCGTGTAACA               TGCT ATCACA AGCA                TGAATTTTACTTTAG  42 145
CH53_RS18915 4252484 .. 4252511 - -14.3  -4.67982   GCTTACTGAAGAAAA        TCAGCGTTGAG GCTGTT CTCAACGCTGA         AATAACCTTCTATCT 100 133
        minC NONE
CH53_RS18855 NONE
        minE 4238464 .. 4238491 - -14.3  -3.08036   TTAATTAAACGAAAG        TACCCCCTGTA AATAAA TACAGGGGGTA         GTTATTGCGAAGAAA  95 41
CH53_RS18820 4230840 .. 4230855 -  -3.2  -2.62184   TGGTTGGGCATATTA              TCACTG CTGT CAGTGT               TAGGGGCATTCAGTG  42 351
CH53_RS18795 4225682 .. 4225693 -  -2.2  -4.08064   AACCCTGCGTTAAAA                CACG GTGC CATG                 CATGTTATCCGCTTG  53 248
CH53_RS18790 4224049 .. 4224071 -  -7.7   -5.5762   ATTAAACATAAAAAA           GCCCGCA TATCTGAGT TGCGGGC           TTTTGTGTTTAATGG 100 52
        znuC NONE
        znuB 4218690 .. 4218724 -  -3.5  -3.54653   ATTGGGAGCATACAA     GCCCACGCAGAGACG AGATA CGTATCTGCATAACC     ATTATATTGCTCATT  50 266
        tppB 4217039 .. 4217055 -  -7.9  -3.06133   CAAGGTTTTATTCAA              CGCACAC CTC GTGGGCG              AATTGCCACCAATCA  60 127
CH53_RS18725 NONE
CH53_RS18720 NONE
CH53_RS18715 4209074 .. 4209090 -  -6.5  -3.16191   GCAGATGGGCATGAA              GGCGG TAGTCAG CCGCC              CAAACTAACGGTGTT  58 83
CH53_RS18710 NONE
CH53_RS18705 4207011 .. 4207037 -  -6.4  -3.65693   ATGAGATATCGCAAA         GCGGGCGTCACA ATG TGTGCCGACAGC         GATGCTGATGAGTTT  63 189
CH53_RS18690 4203390 .. 4203405 - -10.4  -4.35483   TCGTATTATAACAAA              GGCACC AGAA GGTGCC               TTTTTCACTGAGATA  90 96
CH53_RS18650 4193859 .. 4193881 -  -4.3   -3.5936   TTGAAACTTTCTAAA          CTG-AATAGT AAAA ACTATTTCAG           TAGTGATCATAAATG  52 465
CH53_RS18640 4191289 .. 4191301 -  -2.7  -4.16668   TGAACAAACAAAATA                GATTC GTC AAATC                AAACCAGCCAAACAG  57 259
CH53_RS18635 4190196 .. 4190215 -  -7.2  -3.38812   GCGTTTGCAACAAGA            CTATCAGCC TCA GGCTG-TAG            CTGCTGACTATAACG  62 497
CH53_RS18615 4187736 .. 4187785 - -14.6  -6.10295   TGAAGACAAAAAAAA CGGCAATCGATAACA-GTCAGAT ATGAA ACCAGACATGTTATCAATTGCCG CTTCGTTTGCTGTAG 100 69
CH53_RS18610 4186456 .. 4186493 -  -8.6  -2.93853   ACATAGCGTAAATCA  CAGGCAAACCAGAGGGGC TAAC GCCACTCT--TTTGCCTG   TAGTGGTGAATCAAC  67 5
CH53_RS18605 4186203 .. 4186236 - -14.7  -4.70583   CTTATTAACACAAAA     GAAAAAGGCCCTGAC TTTC GTCAGAGCCTTTTGC      TCGAATATGGCGGTG 100 33
CH53_RS18595 4182735 .. 4182758 -   -11  -5.15969   TCTTAATCGAAAAAA          GGCAGTGTAG TTAC CTACGCTGCC           TTTTTTGATACCCGT  93 59
CH53_RS18560 NONE
CH53_RS18555 4175339 .. 4175349 -  -5.4  -3.31461   CAGGTATTTTCAGAA                 CTCA AGG TGAG                 TAGAGCCATTACATC  56 64
CH53_RS18550 4173902 .. 4173927 -  -8.9  -4.55625   ATCAAGAGTAGAAAA         CCCGTTGTCGC ATCT GCTTCAACGGG          TTTTTCTTTATCTGC  88 199
CH53_RS18540 4172202 .. 4172213 -    -3  -3.36961   ATACAAAAAAAATAC                TCTT TATG AAGA                 TTTCGACAGTATCCA  47 333
        ychF 4170595 .. 4170610 - -10.4  -5.74122   TATGACATAAAAAAA              CCACGC GATC GCGTGG               TTTTAAAGTAATAAC 100 64
CH53_RS18520 4168395 .. 4168418 -  -9.6  -4.84311   GCTTACAGAATAAAA          CAAGGCTCCT GAAA AGGAGCCTTT           TGCTTATTTGATACC  93 189
CH53_RS18500 NONE
CH53_RS18495 NONE
CH53_RS18490 NONE
CH53_RS18485 4161703 .. 4161747 -  -9.5  -3.72576   GTCGGCGCGATTAAA CCGGTAGCACT-AACAGC CTATCATTCT GCTGTTGAGTGCTACTGG AGTTTGAGACCAAAT  79 211
CH53_RS18455 4154399 .. 4154418 -  -6.4  -3.20723   TGCTCACCAATTGAA            TCACTGAC GTGA GTCAGTGC             TCCGAGATTCATTCA  58 193
CH53_RS18450 NONE
CH53_RS18445 4152247 .. 4152264 - -10.5  -4.87291   TAGGTGAATTAAAAA             GGCGGGA TTAA CCCCGCC              TTTTTTGCATTTCTT  93 75
CH53_RS18405 NONE
CH53_RS18400 4139543 .. 4139567 -  -7.2  -4.02119   TACTATAAGAAAATA         TCA-GGGCCAG CGAA CTAGCCCATGA          TTGTCATTATCTACT  73 47
CH53_RS18395 4137106 .. 4137123 -    -2  -4.58283   CAATGCTTTCAAAAA             TGCCGGT CTGAC ACCGG-A             TATTGCGCTCAGTGC  63 369
CH53_RS18385 4134723 .. 4134740 -  -7.1  -3.64915   GGGGATAAACTATAA             CATTAAC CAAT GTTAATG              ATAATTATTTGCATG  68 108
CH53_RS18380 4133757 .. 4133778 -  -8.1  -4.27192   AAACGGCCATGAAAA           TGGACACTA CAGG TAATGTCCA            TTGATTTTATAGATA  77 51
CH53_RS18375 4132424 .. 4132448 - -13.6  -5.26316   TGACCCGATAAAAAA          GGGCAAGCGC GATAA ACGCTTGCCC          TTTGCTTATCCCTAA 100 51
CH53_RS18330 4119893 .. 4119908 -  -5.4  -4.58663   ATTACTGGCGAAAAA              GCGATA ATTG TACCGC               AGGTACCCAACCAGC  73 67
CH53_RS18255 NONE
CH53_RS18250 4103438 .. 4103470 -  -3.4  -3.28924   GACGTTTGTTGACAA     TATTCG-CTATGCGG CAGA CCGCTTTGCCGAACA      TAATATTAAGGTAAT  48 438
CH53_RS18225 4099728 .. 4099741 -  -2.4  -3.73386   ATATAATTATTCAAA               CTGA ACACGG TCAG                GTGGTTTTATCATTT  49 75
CH53_RS18220 NONE
CH53_RS18215 4097090 .. 4097102 -  -4.1  -3.39556   AATCGCCCAATAAGA                CTGAC GTC ATCAG                CGGCATCCCTTAACG  50 117
CH53_RS18205 NONE
CH53_RS18175 4083322 .. 4083340 -  -3.1  -4.79174   ACCGAATGAATAAAA             TCTGTGG TTGGG CGACAGA             CTCTTGTTGATAGGG  67 429
CH53_RS18165 4081926 .. 4081936 -    -4  -3.95554   CCACTTAATAAAAGA                 CTTA TAT TAAG                 TTATGAAATATACAG  57 181
CH53_RS18160 4080583 .. 4080602 -  -7.9  -6.11644   CCATTGAAAAAAAAA            GCTAGCA TAATTT TGCTAGC             AGGTAAAATTACCAT 100 115
CH53_RS18155 4079658 .. 4079676 - -11.7  -3.10589   GAAAAATGGTTAATA             GGCGGGA GCCAT TCCCGCC             AATTTATTTCCGGTC  83 53
CH53_RS18145 NONE
CH53_RS18140 4077281 .. 4077305 -  -8.7  -3.17273   CAGATATTAAAAGCA          TAATCGATATG CGA CATAGCGATTA          AGATTTTTGCTTAGT  68 127
CH53_RS21925 4074611 .. 4074642 -  -6.6  -2.79968   GATTCAATTCTAAAG      TGCAGAGCTAAG CCGCCTTT CTTTGCCCTGCA       TACATTACCCAGACT  57 234
CH53_RS18130 4073935 .. 4073948 -  -6.7  -3.31428   TGCAAACAGAATAGA               CATCC ATTC GGATG                CAGTACGGCCAAGAA  62 60
CH53_RS18125 4073286 .. 4073298 -  -4.7  -3.14344   TATTTGTTTTACGAA                CGCGG CTG CCGTG                CAGGGCAATATCGCC  51 88
CH53_RS18120 NONE
CH53_RS18115 4069839 .. 4069851 -  -7.7  -3.01712   TCTCTCCTTGCAATA                CGGAA TAT TTCCG                CATTATTAACTGCGC  63 31
CH53_RS21920 NONE
CH53_RS18105 NONE
CH53_RS18100 4068101 .. 4068122 -  -2.9  -3.45366   CTGTTAATTAATTAA           CCTGTAAAC AGTT GGTTCCAGG            TATTTATTTTAAGAG  48 106
CH53_RS18095 4066784 .. 4066810 - -11.7  -2.81888   GGCTAAATCTAAGCA        TCTGCGACCGAG GGCA CT-GGTCGCAGA         CCTGCGCCTCGACAA  81 463
CH53_RS18080 NONE
CH53_RS18075 4064896 .. 4064906 -    -4  -2.75064   TTGGCGATGCAATCA                 GTTA TTT TAAC                 TTTCTTAATACGAAT  45 155
CH53_RS18065 4063813 .. 4063844 -   -19  -3.43785   TATTACATGAATTAA      TCAAAGGATGACTG TAAA CAGTCATCCTTTGA       TTTTAGATATATTTA 100 201
CH53_RS18060 4063049 .. 4063062 -  -3.1  -3.54177   TTCAAAAGTAATGAA               GCCACG ATA CGTG-C               AGTTAAGAATAAGCA  49 257
CH53_RS18035 NONE
CH53_RS18030 NONE
CH53_RS18025 NONE
CH53_RS18020 4057841 .. 4057863 -  -5.6  -3.68435   GTTTTCAAAATAAGA           GTGAACGT CTGCTTC ACGCTCAC           AGTGGACCCCAGCCC  60 154
CH53_RS17975 4051451 .. 4051477 -  -7.3  -2.82407   AACATAATTGCAAAT         TGAGAGCCATT CTCAC AACGGCTCTCT         TGATATAATTGAAAA  60 61
CH53_RS17925 4044415 .. 4044429 -  -3.5  -3.58726   TCCTCGCATAGAGAA               CGCCA TCAAC TGGCA               GGCATTCATATTCTG  50 161
CH53_RS17920 NONE
CH53_RS17915 NONE
CH53_RS17910 4042508 .. 4042526 -  -5.9   -3.6502   CACTGTTTATTTAAA             GGCCCGC CGCAC ACAGGCC             GTGACTAAAATCATT  60 36
CH53_RS17905 NONE
CH53_RS17900 4040853 .. 4040869 - -10.9  -2.62616   TCAGTTGGTAGAGCA              CGACCTT GCC AAGGTCG              GGGTCGCGAGTTCGA  72 386
CH53_RS17865 NONE
CH53_RS17860 NONE
CH53_RS17850 4033938 .. 4033971 - -10.4  -3.53298   ATCACCTGAAATGAA     GCGCTAAGCCGT TATGTTTTGC ACGACTTAGCGC      TCAGTCATTATTTTC  79 41
CH53_RS17840 4031847 .. 4031894 -  -3.7  -2.87186   AAGGACAGTAAGAAT GCCTAT-TTTGGCTAACAGTC GAAGGACT GACTGCTAGCCGAATATAG-C GGGCCCATAGGCATT  46 54
CH53_RS17825 4028714 .. 4028735 -  -7.9  -5.18371   TCGGATAAAACAAAA           GAGCCGCGC GTTA GCGAGACTC            TTATAGTGGTTACTG  91 367
CH53_RS17820 4027935 .. 4027946 -  -4.4  -4.14615   ATAAAACAGTATAAA                CAGA AAAA TCTG                 ATGAAATGTTTGACA  63 160
CH53_RS17810 4026116 .. 4026140 - -18.7  -4.65895   GTCTGTAGGTAAAAA          GTTGACTCCCG CGC CGGGAGTCAAC          TGATGATAATAAAGC 100 66
CH53_RS17795 4023798 .. 4023808 -  -2.6  -2.94032   ATGCTCCAATCAAAT                 TTAT TGA ATAA                 TGCTGATGATGTAAT  43 170
CH53_RS17790 4022741 .. 4022755 - -11.4  -3.53224   TATTCGGCTGGCAAA               TCCGCG TAC CGCGGA               AACCCAGAATAACCT  83 447
        putA 4013292 .. 4013311 -  -8.6  -3.96483   AGTCTATGTAAAGAA            TAAGGCCC CGAA GGACCTTA             TTGGTGAGCCGTGAT  79 79
CH53_RS17760 4012344 .. 4012362 - -14.6  -2.76456   AAACCTATTGAAGTA             TGGGGGCA TTT TGCCCCCA             ATTTTATCAAGCAAT  95 42
CH53_RS17720 NONE
        fliS NONE
CH53_RS17710 4002769 .. 4002783 -  -2.8  -2.58638   AAAATTTACAGTAAC               TGGCTA TTT TAGCGA               AAAAGATTAATGGTG  41 194
CH53_RS17705 4001798 .. 4001808 -  -3.2  -3.12847   AAGGGTTATATTGAA                 CCTA AAT CAGG                 CGTATGAAGGCCTAA  46 5
CH53_RS17700 3998483 .. 3998499 -  -4.4  -4.15698   CATTCAGATAAATAA             CGT-GCC TTGC GGCTACG              CTGTCTGCGCCAATG  63 21
CH53_RS17695 3997619 .. 3997672 - -10.6  -5.03715   ATGAGGGGCAAAAAA TTACCGCAAACTAACTCGAACTATG CCAAT CACAGTT-GAGACACTTTGCGGTAA GTCACTGCCAGCCAC  93 112
CH53_RS17650 3985388 .. 3985400 -  -2.6  -3.12324   AATCAGTGAAAACCA                GCAG CATGC CCGC                ACTCAGGCGCAGAAT  45 217
CH53_RS17640 NONE
        fliG NONE
        fliH NONE
        fliI NONE
        fliJ NONE
CH53_RS17615 3978082 .. 3978093 -  -5.8  -3.35679   CCCGCGTATCCATAA                TGCC AATA GGCA                 GAATAGATGGGGAAA  56 91
        fliL 3977453 .. 3977481 -  -3.1  -3.30124   TGCTATCGCCCATAA        TGATTATCGCAAT ATA AATGCGGTAAACA        GCACATCGCTGACTA  48 0
        fliM NONE
        fliN NONE
CH53_RS17595 3975455 .. 3975465 -  -3.2  -3.02511   GCCACGGGGCGAAGA                 GACA TCA TGCC                 GATTTTCCCGGATGT  45 19
        fliP 3974636 .. 3974648 -  -3.3  -4.87665   CCTTAGCTATAAAAA                CTCTG TGC CAGGG                AACCCAGTAGTAGCT  70 0
        fliQ NONE
        fliR 3973167 .. 3973177 -  -3.2  -3.66178   CGGTTCAAGCCGAAA                 TCGG TAC CCAA                 CTGCAAGAGCTAGAC  53 404
CH53_RS17520 3961989 .. 3962006 -  -2.7  -2.86343   ACTTTAATCACTATA             GCATAAT CCGT ATTGTGC              CATCTTCGCCTACAG  42 3
CH53_RS17515 NONE
CH53_RS17510 3960989 .. 3961029 - -10.7  -3.10545   GACATGGGAAAACCA TACGGATATAAGCC-TCG GCTGTG CGATGGGTTATATCCGTA  GACATGGGATCTTAA  79 37
CH53_RS17430 3942318 .. 3942335 -    -7  -3.23219   AATAGTGCGACAAGA             CAGCGA AAGGTA TCGCTG              TGTTAATCGCATGGT  60 66
CH53_RS17425 3941110 .. 3941135 - -10.4  -2.59793   GTATTGATATAACAG         TTTCCGGGGC GAGTTG GCCCCGGAAT          TATTTCGACTATTCG  72 34
CH53_RS17410 3934520 .. 3934550 - -11.9  -5.17576   GAGTAATGCAAAAAA      CCGGAGG-AAGGTG AGTG CGCCTTGCCTCCGG       TTTTGCTATCTAACT 100 82
        lacI NONE
        lacZ 3928783 .. 3928802 - -10.7  -5.86976   GTAGAAAACAAAAAA            GCGCCCA ACGGTG TGGGCGC             ACAAATTTGCAAAGG 100 213
CH53_RS17380 3927530 .. 3927576 - -25.6  -2.64933   CAGCGATGTATATTA TTCATTCGCTGAAATCAACACC TTG AGTGTCGATTTCAGCGAATGAA TGTTAATAATAGCGG 100 62
CH53_RS17375 3926807 .. 3926820 -  -9.5   -3.6959   ATATTACGATTGAAA               GCCCC TGGC GGGGC                AACAGTGTTCTAAAT  79 49
CH53_RS17370 3926179 .. 3926199 -  -5.5  -3.64915   TGGTAGAAAGCATAA            CTCTTTATT ATA AATAAAGTG            AGTCTGGAGGCACAG  60 44
CH53_RS17365 3925196 .. 3925218 -   -12   -3.1082   CAGGCATTTAATATA           TAGCCCGCCA TCT TGGCGGGTTA           GCAGCATGAATTATA  83 36
CH53_RS17360 3924378 .. 3924395 -  -3.4  -2.62579   CTTCCAAAAGAAAGT             GGCTCA GGCGAT TGAACC              TGCTTGCCATATTTA  43 322
CH53_RS17350 3921127 .. 3921148 - -12.3  -5.28176   TGCAGTCACAAAAAA           GACGGCACA GTGA TGCGCCGTC            TTACTCTATCAATAC 100 331
CH53_RS17310 3911493 .. 3911511 -  -9.6  -3.06796   GTGCATTGCAGCTAA             CTGCTCAG CAT CTGAGCAA             AGGCGGTGTAAATAA  72 114
CH53_RS17305 3911308 .. 3911337 - -15.9  -3.65696   ATTGATAGAAAGCAA       GAAAGCAGACGTT AGTG AACGTCTGCTTCC        CTTAAATTGGCTCCT 100 33
CH53_RS17300 NONE
CH53_RS17295 3908303 .. 3908318 - -10.4  -3.08133   TAGTGATTGATCTAA              GGCCAC ATAT GTGGCC               TTGTTTTTTTATTTA  75 38
CH53_RS17285 NONE
CH53_RS17280 3904446 .. 3904460 -    -5  -2.80994   TTGAACGTGATTAGA               TGGAAA AGT CTTCCA               GATTTTTACCGCTTC  50 197
CH53_RS17275 3903989 .. 3904024 -  -7.6  -3.03124   TTTCACGTCTGAACA    TCTCTCCGGCTTAAAA CTTG TTTTAGGCTGGAGAGT     TGTTGAGCAAACCCC  61 117
CH53_RS17260 NONE
CH53_RS17255 3900883 .. 3900906 - -13.2  -2.59564   AAAAAGAGTATTAAT          TTCTCCCGCC GTAA GGCGGGAAAA           TACTAAAATACATAA  90 315
CH53_RS17250 3899086 .. 3899098 -  -3.5   -3.7948   CCAATAGTGATTAAA                TTATT TTT AATAA                TATACGTATTATCTA  54 34
CH53_RS21905 NONE
CH53_RS17215 3894246 .. 3894276 -  -8.4  -5.08255   ACTTCGAAAATAAAA       GAGCCTAAAAATAA ATG TTTTTTGTAGGCTC       TACATCAAATATTTT  90 40
CH53_RS17190 3888004 .. 3888038 -  -3.2  -2.80074   TTTCTCATAATATTA    CCTTTAATTATATAC GTCATA ATATATA-TTAAAGG     ATAGATGGAAAGTGT  44 142
CH53_RS17185 3887386 .. 3887396 -  -5.4  -3.54741   TAGCATTTTGCCAAA                 CGTT GAT AACG                 TTTTCTCAAATTAAA  56 146
CH53_RS17125 3879324 .. 3879341 -  -8.4   -3.4015   ATAATAAGCGCAGAA             GGAGGG GAGTTA CCCTCC              CTTTTAACTCGTTAT  70 37
CH53_RS17105 NONE
CH53_RS17100 3873712 .. 3873739 -  -3.4  -4.40561   CTCTGCTAAAAATAA        CTCAGCGACAAC CGTT ACTGTCGTTGAA         AATGAAAGTTGAGGG  63 351
CH53_RS17090 NONE
CH53_RS17085 3869844 .. 3869865 -  -7.9  -4.24002   TTTTAAATGCCAAAA           GCAGGCGCC TGTG GACGTCTGC            TTTTCTAAAGTTGGC  77 116
CH53_RS17065 3864552 .. 3864577 -  -6.9  -3.05384   CCTCTGTGTACCCAA         GGTCATTGGCTG CAA CACCC-ATGACC         TTGGGCAAATATCAG  59 75
CH53_RS17060 NONE
CH53_RS17055 3862674 .. 3862690 - -10.8  -3.47494   AGCTAACCATGAGAA              GGGCCG GTCAG CGGCCC              GACTCATAATTATCG  82 46
CH53_RS17015 3853788 .. 3853798 -  -5.4  -2.72856   CACTAAAATATTAAG                 CCAT TCC ATGG                 GATCTCCTCGTCTTT  51 45
        dpiA 3853053 .. 3853080 - -10.7  -4.25056   TATCTGAGCAATAAA        GCGTTCCACGAG ATTGA CT-GTGGAACGC        ATTTGCTGTCGAGTG  90 55
CH53_RS17005 NONE
CH53_RS17000 NONE
CH53_RS16995 NONE
CH53_RS16990 3847961 .. 3847976 -  -4.6  -3.67588   TAAATGCTATTCAAA              CCGGCC CCCC GACCGA               TCTGTTATTCACTTG  56 115
CH53_RS16985 NONE
        fbpC 3844628 .. 3844655 - -12.6  -3.19192   GGCCATTCAACGTAA        GGGGGCAGCGCA TTTG CGCGCCGCCCAC         CAATGAGTTTACTGC  85 34
CH53_RS16975 3844356 .. 3844391 - -15.6   -4.6008   AAAACAGAATTAAAA    CAAGAAACCCGCTTAG TTTC CTAAGCGGGTTTCTCT     AAATTTGGCTCCTCT 100 31
CH53_RS16970 3843167 .. 3843183 -  -5.1  -3.42395   CCTACTACGTAAAGA              TAGCGTT GTC AGCGCTA              AAGCAGACCAGCCTG  54 43
CH53_RS16965 3839310 .. 3839333 -  -7.4  -4.58585   TATCTAAATAAGAAA          GCCCACCAAGT TAT ACG-GGTGGGC          TTTAGATGAAAGGGC  81 52
CH53_RS16955 3838405 .. 3838431 -  -2.4  -2.52464   CCGGTTGGCAACGTA         TTCATGAAAC GGCTTGG ATCTCATGAA         TAGTCAGGGGTAGGT  39 29
CH53_RS16950 3837537 .. 3837574 - -10.8  -3.72576   CCGTGCGTTAGCAAA   TAG-GATAACCAGGGAG CAAAC CTCACTGGTTATCTCTA   TAGCTGGGCACGAAC  83 62
CH53_RS16945 NONE
CH53_RS16940 NONE
CH53_RS16935 3832853 .. 3832885 -  -2.7  -5.12617   GAACGATTTAAAAAA      GCCAGCAAATGTTAC GGT GTAACTTTAACTAAC      TGACTGTTTTTTAGC  70 4
CH53_RS16930 3832381 .. 3832402 - -13.1  -5.28315   ATAAAATGCAAAAAA           GCAGACGTT TGTA AACGTCTGC            TTTCTTTAATTTGGC 100 37
CH53_RS16815 3801327 .. 3801342 -  -6.8  -5.13473   ACGAGAGCTAAAAAA              GCCACC TTGT GGTGAC               TTTTTTACATCTTTA  85 133
CH53_RS16790 3796259 .. 3796270 -  -7.2   -4.0683   AAAGAAAGCGATAAA                CGCG TAAC CGCG                 ATTATTCTTGCGGCC  73 117
CH53_RS16775 3791679 .. 3791693 -  -8.5  -5.80817   TGGAATAGAAAAAAA               CCGCC AGGTA GGCGG               TTTTTTTGTGCTGGT 100 153
CH53_RS16760 3787921 .. 3787933 -  -4.1  -2.96801   GCTGATAAAAAAATG                CTCTC GTT GAAAG                AACTCTCCGGCCAGA  47 342
CH53_RS16635 NONE
CH53_RS16630 3765163 .. 3765175 -  -4.7   -3.4582   CGATTTCATGAAACA                GCCTC ACT GTGGC                GTCAGATATAAGAAG  54 27
        pduC NONE
        pduD NONE
        pduE NONE
CH53_RS16610 NONE
CH53_RS16605 3759891 .. 3759911 -  -3.2  -3.28712   CCTTGGTTTTTACAA           CACCAGGTG TACG CTCC-GGTG            GCTGTGCGCTGGCCA  48 86
CH53_RS16600 3759486 .. 3759498 -  -3.4  -2.70979   CTTCAAGTAAACCCA                GTGA CGTTT TCAC                GCTGTGCTCCTCTTC  43 47
CH53_RS16595 NONE
CH53_RS16590 NONE
CH53_RS16585 NONE
CH53_RS16580 NONE
CH53_RS16575 NONE
CH53_RS16570 NONE
CH53_RS16565 NONE
CH53_RS16560 NONE
CH53_RS16555 NONE
CH53_RS16550 3751621 .. 3751640 -  -3.6  -3.24329   TAGGGCCAATCAACA            TGATGC GTTGCATG GCATCA             GGTCCGGGTCATCGG  46 23
CH53_RS16545 NONE
CH53_RS16540 NONE
CH53_RS16535 3749174 .. 3749184 -  -4.6  -3.35679   GCTGCCTACCTACAA                 CGCC AAT GACG                 TTGGCTATATCAGCG  52 30
CH53_RS16530 NONE
CH53_RS16525 3746897 .. 3746919 -  -2.1  -2.60797   CCCATATACATGAAT           GCTATTT ACATGGACA AAATAGC           TGCATTCCCTGTTTG  40 189
CH53_RS16520 3745667 .. 3745699 - -22.1  -3.45366   TTCCTAATGAATTAA      TTGCGGGGCCAGACA GGG CGTCCGGCCCCGCAA      TAACTTAGTGAATCA 100 38
CH53_RS16515 NONE
CH53_RS16510 NONE
CH53_RS16505 3742107 .. 3742127 - -12.6  -4.23674   CGCTATTAAGAGAAA            GGCTGGCA TTAAT TGCCAGCC            TTTTCTTTTGGCTAA 100 48
        sbcB 3738532 .. 3738549 - -12.7  -4.25848   AATTGCTGACTAAAA             CGGAGCC TGAT GGCTCCG              TTTTCTATTGGATAA 100 56
CH53_RS16470 NONE
CH53_RS16465 3732570 .. 3732601 -  -2.2  -3.06679   AAGATTTGTAGCGAA      CTGGGGTTTGAGTA TCAA TATCCAGACCCAAG       CAGGATGCCTTTGAA  42 218
        hisG NONE
        hisD NONE
CH53_RS16445 NONE
CH53_RS16440 3726824 .. 3726834 -  -3.2  -2.67143   ACATTCATTACAGCA                 CTCC TTT GGAA                 CTTGGCAGGGTATTG  43 7
        hisH NONE
CH53_RS16430 NONE
CH53_RS16425 NONE
CH53_RS16420 3724060 .. 3724084 - -12.9  -5.06414   TTGCCTTAATAAAAA          CGCCCTCGA TGCTGAG TCGAGGGCG          TTTTTTTGCTGATAA 100 58
CH53_RS16320 3702416 .. 3702434 - -14.6    -5.252   TATTGCGACAAAAAA             GCCGGGTA GAT TACCCGGC             TTTTGCACCAAATCT 100 51
        metG 3693802 .. 3693828 - -10.1  -5.28176   TCGAGTGATAAAAAA        TGCCGG-CTGGG TTTC CCCTGACCGGCA         TTTTGGCTATTGCCT 100 99
CH53_RS16280 NONE
CH53_RS16275 3690071 .. 3690094 - -11.8  -3.34894   AATTTTTTGCAAACA          GCAGATCGAC CTGA ATCGATCTGC           CATTAATTGATATCG  86 97
CH53_RS16270 NONE
CH53_RS16265 NONE
CH53_RS16260 3687335 .. 3687350 -  -3.3  -3.78087   AAGTAAAACCCCAAA              TGAGA GATGTA TCTCA               AATTTAAACCTGAAA  52 99
CH53_RS16255 3686297 .. 3686322 -    -9  -3.45023   GGATTAGCATGATAA         CCGGGGGTTA GCAATG TAACCCCCCG          ATTGGTGGGGCATTA  74 38
CH53_RS16250 3684261 .. 3684285 - -12.1  -3.28712   TTTGCTGGTGGATAA          CCGGCCCACGC AAA ACATGAGCCGG          TTACTATTTAGAACG  86 33
CH53_RS16245 3682629 .. 3682649 -  -3.1  -3.74693   TCGCATTGGATGAAA            CTCAGCCCG GTA CAGCCTGGG            TGGATGTGTGCGGTG  52 454
CH53_RS16225 NONE
CH53_RS16220 NONE
        hycD 3678118 .. 3678132 -  -2.1  -2.55712   CGATATTCATAAGAG               CCATG TTCTC CATGA               TGGGTTTATTAGCTC  39 42
CH53_RS16210 NONE
        hyfE NONE
CH53_RS16200 NONE
        hycE NONE
CH53_RS16190 NONE
CH53_RS16185 NONE
CH53_RS16180 NONE
        hycI 3670251 .. 3670299 -  -6.8  -3.05046   TGACGTCGGCAAAAT TGACGACGGCATGCCGTCATTTA GCTA TAAATG-CGCGAAACCGCCGTCA CCTTGCCAGTGTGGC  59 1
CH53_RS16170 NONE
CH53_RS16165 3666959 .. 3666983 -    -7  -2.75825   CCGCGAACAAAGCCA          GTCTGGGCGC GCTCA GCGCACAGCC          ACCGGAGTGTACATA  57 105
CH53_RS16155 3663300 .. 3663329 - -11.4  -3.23899   TGTGAATTAACGTAA       CAGCCAGTCAGG GATAAA CCCGGCTGGCTG        TTCTGTTATGGGTGT  82 95
CH53_RS16115 3653709 .. 3653725 -  -3.6  -3.00946   GGCTTGTATAAATTA              TGGCCG ATAAG CGGCAA              GCCGTCAGATAAGTC  45 39
CH53_RS16110 NONE
CH53_RS16105 3651526 .. 3651537 -  -7.2  -6.55664   TAAAATAAAAAAAAA                GCCC CGTA GGGC                 TTAAAATAGTTATGA 100 66
CH53_RS16100 3651044 .. 3651074 - -15.6  -3.63515   TGCTATGTGGAACAA       GGTTAGGCCATTAA TAA TTCATGGCCTAACC       AATAATTTCTGAATG 100 51
CH53_RS16095 NONE
CH53_RS16090 NONE
CH53_RS16085 3646595 .. 3646605 -  -6.8  -2.66435   ATGGGTATTATATCA                 CGCA TGT TGCG                 CTCCTATTTTTAAGT  56 35
CH53_RS16080 3644784 .. 3644804 -  -3.2  -4.68424   GAATGGATGTAAAAA            CCGCCAGT TTGGT AATGACGG            CTGCATTATTTATTT  69 510
CH53_RS16065 NONE
CH53_RS16060 3640780 .. 3640798 - -13.2  -3.17146   TGTGTTGATAAGAGA             GCTGATGC ATT GCATCAGC             TTTTTTTTGCGCTAA  91 49
CH53_RS16040 3635256 .. 3635271 -  -6.1  -4.82901   TGTGTCTGATAAAAA              TCCGC TTTCGG GCGGA               TTTTTTTCGCCTGTC  80 78
CH53_RS16025 3633366 .. 3633381 -  -6.1  -3.45324   CAGTCTGATGAAACA              CGGTG ATTTCA CACCG               CCTTTCAGGCAATTT  62 30
CH53_RS16020 3632364 .. 3632378 -   -10  -3.15841   ATAATGCGATGAATA               GTTCCG TAC CGGAAC               GAATCAGCAGGTATG  75 76
CH53_RS16015 3631522 .. 3631536 -    -5  -3.73224   CTATTGGGTATCAAA               CTGAGT ATT ACTCAA               TATTTGACTCGATAA  58 18
CH53_RS16010 3630879 .. 3630894 -  -4.8  -3.32997   GTGCCAGAAATGCAA              GTTATT TAAA AATAAC               GAAATTATTCTAAGT  54 262
        glnH NONE
        glnP NONE
        glnQ 3628578 .. 3628608 - -11.1  -5.80817   CTCAACACAAAAAAA       TCTGGCGGGGATC ATCAA GATGCCCGCCAGC       GGTATGCTAGGGTAA 100 54
CH53_RS15970 3621372 .. 3621389 - -12.7  -6.25741   AAATAAGAAAAAAAA             GCCGGGA GTTA TCCCGGC              GTAATAACAGGTAAT 100 100
CH53_RS15960 3618779 .. 3618797 - -11.8  -3.93288   GTTCACTGAATGAAA             CAACCATG TTA CATGGTTG             ATGCATTTATATTCT  91 71
CH53_RS15955 NONE
CH53_RS15945 3616727 .. 3616745 -  -8.1  -2.78816   TTACTGTTTAGCACA             CGAGGCA GTCAT TGCCCCG             TGTATGGCTCAATAG  62 60
        sseA 3607389 .. 3607401 -  -7.7  -2.61727   ATGTACCACAAGGCA                GGGAA ATC TTCCC                CAGATTAACGGTTGA  58 466
CH53_RS15840 3594814 .. 3594837 -  -3.3  -3.53811   GCGACTTTGCTGAAA          TAGCCATCAT GACCG ATGATG-CTA          CGGCTCTGGATAGCC  50 189
CH53_RS15830 3591970 .. 3591998 -  -4.6  -4.72986   TATCGTCAGCAAAAA        GATACCCAAGGT CGCTT AGCTCAGGTATC        AGAATAGGTATAGAA  72 380
CH53_RS15800 NONE
CH53_RS15795 NONE
CH53_RS15790 NONE
CH53_RS15785 3581287 .. 3581309 -  -2.6  -3.17075   CTTCCTTTAATCTAA           TCGGCGTCTA ATC TAACCGACGA           TTAGTTTTCCATGCC  44 10
CH53_RS15780 3580087 .. 3580105 - -10.3  -3.77484   GATCAAAATTTTAAA             GGACACC CCTGT GGTGTCC             TTTTTGTTTTTTGGT  80 75
CH53_RS15750 3575214 .. 3575224 -  -6.8  -2.60813   CACTTGTCGAAAGAT                 CCGT TAC ACGG                 TATTACCCTTGAACA  53 248
CH53_RS15735 3571076 .. 3571098 - -10.7  -3.55071   CGATATGGCGCTAAA           GGGCTAATA GACAT TATTAGCCC           TGGTTTTTTTGCTGA  82 98
CH53_RS15710 3565899 .. 3565947 -  -6.6   -2.7263   ACCAGGCGGGGAAAT GTACCGAAGGG-GCCGCAATGGC GTAA GCCGTCACAACGCCCATCGGTGC CATCGCCCCGCCAGT  56 68
CH53_RS15700 3563661 .. 3563677 - -10.8  -4.07885   CACCCGGCGGTAAAA              CGCCCG TCAGT CGGGCG              TTTTTTCACTATCAA  88 37
CH53_RS15675 NONE
CH53_RS15670 NONE
CH53_RS15665 3557850 .. 3557862 -  -2.7   -2.5785   TAACGAAGCAGCAAG                TATGC CCC ACATA                AATATCCCTTTATTG  41 146
CH53_RS15660 3556957 .. 3556971 -   -10  -2.57244   TCATCCATTAATTCA               GCAGGA ATG TCCTGC               CTTACGTATACCGAC  72 97
CH53_RS15655 NONE
CH53_RS15650 NONE
CH53_RS15645 NONE
        galM 3552384 .. 3552397 -  -6.7  -2.73364   TTGTCACCCGAATCA               CTGAC CGGT GTCAG                CTCATCGGGATTTCG  56 77
CH53_RS15635 3551846 .. 3551868 -   -15  -3.30798   TATAACCAATTAATA           GATGGGGTAT TAA ATACCCCATC           GGTTGCGGGGATTAG 100 37
        gpmA 3550783 .. 3550808 -  -5.4  -5.27335   GCGGGCAAATAAAAA         CCCCCG-GCAT TGATC ATGTACGGGGG         TTTTTTAATGGTGTT  85 53
CH53_RS15620 NONE
CH53_RS15615 NONE
CH53_RS15610 3544658 .. 3544670 -  -3.4  -3.14132   GCGTGGCCTGATTAA                CCAT TAATG ATGG                TGGTGGTGCCCGCCG  46 16
CH53_RS15520 3530198 .. 3530215 - -12.7  -3.12529   CTAACTCAAGATAGA             GGCCACC TTGC GGTGGCC              TTTTTTTGCCTAATC  85 39
        gltA 3518356 .. 3518375 - -13.6  -5.64274   TTATCTATAAAAAAA            CGCCACCT TCAC AGGTGGCG             CTCTCATCATAAACA 100 56
        kdpF NONE
CH53_RS15410 NONE
CH53_RS15405 3504478 .. 3504507 -  -4.2  -3.01924   TATTCGGTCTTAATA       GCGGCCACGAGCA AAACA CGC-CGTGGCCAT       TGCACAACATTGATT  47 50
CH53_RS15400 NONE
CH53_RS15395 3501021 .. 3501035 -  -5.7  -3.56568   CAAGCAGCGTTCAAA               TCTGC TCCTG GCAGA               TTTGTCACCCCAGTC  58 112
CH53_RS15390 3500116 .. 3500129 -  -3.1  -3.51708   CAGGGCGTAAATCAA               CCATG TACT CATGA                ATAATAAGACCTATT  50 119
CH53_RS15385 3499592 .. 3499609 - -11.3  -4.18702   ATAACCGGTAAGAAA             TAGCGCC TATT GGCGCTA              TTTTTTCGCCAGAAG  93 115
CH53_RS15360 3494451 .. 3494470 -   -15  -4.34866   ATCGAATAATACAAA            TCCCGGCC AACT GGCCGGGA             TCTTTGCTTTTAAGC 100 35
CH53_RS15345 NONE
CH53_RS15340 3492487 .. 3492506 - -10.7  -4.95167   GAACTAAGAATAAAA            TCCCGCC CTCAGT GGCGGGA             TTACTTTATGAGTCA  93 46
CH53_RS15320 3479513 .. 3479529 -  -3.7  -3.28712   TTCTTTTTTGCACAA              TTTTTCC ACA GGAAATA              CATTTTTTTTCCCCA  50 84
CH53_RS15315 3478906 .. 3478935 - -22.3  -5.04601   GGGATAAAGTAAAAA       CGGCGTGGCGTAA GTGA TTACGCCACGCCG        TCGTGGTAACCGATA 100 44
CH53_RS15305 3476228 .. 3476271 -  -7.4  -2.83208   AAAGGATAAAAGGCA GCGGAAACGC-CCGGCAGTGT TGC ACACGACCATCGCGTTTCCGA CTCGTTAGCTTAACT  60 72
         fur 3475074 .. 3475087 -  -3.9  -4.05181   AGGATAAACAGTAAA               TTTGT CACT ACAAA                AGGGATACAGATTTT  59 320
        nagB NONE
        nagA NONE
CH53_RS15260 3461879 .. 3461890 -  -7.2  -3.39482   TAACATGAGCGATAA                GGGG TTTA CCCC                 TGCCATAGCCTTATT  65 53
CH53_RS15255 3460928 .. 3460954 - -15.2  -3.07655   GGGGGCAAAAAAGAG         GCTGGCGGCCAT GGC ATGACCGCCAAC         AGAGATTAGATAATA 100 31
        asnB 3458751 .. 3458774 -   -11  -5.14563   TTTGCCAGCAAAAAA          CAAGGCCACC CTAG GGCAGCCTTG           AGATTGGACAGTCAA  93 65
CH53_RS15245 NONE
CH53_RS15240 NONE
CH53_RS15235 NONE
CH53_RS15230 NONE
CH53_RS15225 NONE
CH53_RS15220 3457944 .. 3457959 -  -8.2  -4.78149   CCCAGAATGCAAAAA              GCCCGC CGAA GCGAGC               TTTTCTAAATTTGGC  84 37
CH53_RS15215 NONE
CH53_RS15210 3457147 .. 3457177 - -14.2  -2.56271   GGGCGATGAGAATAG       CCTGTAAGCAGA TACCGGT TCTGCTTACAGG       ACGCGTAATTCTTCA  93 19
CH53_RS15200 3454147 .. 3454170 - -12.5  -4.90778   CCCACTGAAATAAAA          CAGGCACTG ACAATG CAGTGCCTG           CTAATGCGAGTTAAC 100 55
CH53_RS15195 3452825 .. 3452841 -  -2.1  -2.66984   TAAATCGAGTATAAC              TTGGCTC ACG GAGCCTC              CTGCTCAGACGGGGT  40 14
CH53_RS15190 3452345 .. 3452358 -  -3.8  -3.27475   CTGGGCATTATAACA               CCCA GTGTTA TGGG                CTTATACGGGGTCTT  50 27
CH53_RS15185 3451263 .. 3451279 -  -2.2  -3.06696   CTGGCGTTGAAGATA              TGAAGC AATAG GCATCA              AGGATTTATTCTTCC  42 31
         lnt 3449698 .. 3449720 -  -9.9  -3.36273   GGCTCTCAAGATTAA           TGGGCATGC AGATA ACATGCCCA           CATATTGCGTTATTT  75 35
CH53_RS15175 3449069 .. 3449084 -  -8.2  -2.78547   TGAGGTCATTAATCA              GCCGCC AAAC AGCGGC               TTTACTGCCCGTTAG  62 37
CH53_RS15170 3447362 .. 3447388 - -11.6  -5.64274   GGACTCACAAAAAAA         TGCGGAGTGG GGAACGG CCACCCCGCA         TCCTGTCTTTACCCT 100 248
CH53_RS15165 NONE
CH53_RS15160 NONE
        artP 3445104 .. 3445131 -  -7.6  -2.85985   AGAACAGACGCAAAT        TTCCTCCCCTAC GGGC GCAGGGGAGGTG         GTGTGATTAATGCAG  60 32
        rihA 3444038 .. 3444061 - -16.8  -3.90048   TTTGGGCTAAAAAGA          GACACTCCGC AGTG GCGGAGTGTC           ATTCGATTATTCGCT 100 32
        leuS NONE
CH53_RS15135 NONE
        holA NONE
CH53_RS15125 3438212 .. 3438225 -  -5.3  -2.73681   CACTCACCCGAATCA               CTTAC CTGA GTAAG                CTCATCGGGATTTAT  49 64
CH53_RS15120 NONE
CH53_RS15115 NONE
CH53_RS15110 NONE
CH53_RS15105 NONE
CH53_RS15100 3432772 .. 3432787 -  -7.6  -3.05844   CGTTTCACCGTAACA              TCCTGT TTGC ACAGGA               GGTTACGGTTATTTT  61 80
CH53_RS15095 3431275 .. 3431292 - -12.7  -3.68761   ACCCTAAAATTATAA             CTCCCGC CGGG GCGGGAG              TTTCATATTATTTAT  90 78
CH53_RS15090 3430827 .. 3430856 -  -9.2  -4.31549   TAAAAGGTAAAATAA       GGCCCAGAGCGG GAATAT CCGGTCCAGGCC        ATAATAAGGTGGGCT  86 97
CH53_RS15085 3429836 .. 3429846 -  -2.6  -4.56597   GGCGTTCGTTAAAAA                 TTTT TTG AAAA                 TTGTTTAAAAATTAT  62 207
CH53_RS15080 3428693 .. 3428713 - -11.9  -3.92324   TCTGGTAACAGGAAA            CGGATCTCC AAG GGAAATCCG            TTTTTGCTTATCTGG  91 103
        adrA 3426966 .. 3426978 -  -4.9  -2.74144   CCTGCATCTTGAAAT                CTATT GGG AATAG                TTTTTAACTGGCTAG  49 29
CH53_RS15065 3425940 .. 3425957 - -12.7  -4.29738   CCATATTTATTAAAA             CCCGCCT CAAT AGGCGGG              TTTTTTATTGGCGGT 100 451
CH53_RS15055 3424863 .. 3424883 -  -6.8  -3.09834   GATGCCAGCACCTAA            CTTTCCGG GTAGG CCGGACAG            CCCCAAAGGCATTTG  60 94
CH53_RS15045 3422350 .. 3422367 -  -4.9  -3.59979   TTTTCTTACTGGAAA             CCAGCAAG AAA CTT-CTGG             TAGAGCAACTCATTA  55 490
CH53_RS15030 3420404 .. 3420416 -  -5.5  -4.56597   TCTGGTGGCGAAAAA                CAGCG GGT CGCTA                TTGCGCGTACTATCC  73 339
CH53_RS15015 NONE
CH53_RS15010 3415264 .. 3415279 -    -4  -3.65812   TTCCCGGCAACATAA              CAATAC TAAT GTACTG               GCTTTTGGTTCTAGG  55 239
CH53_RS15000 NONE
CH53_RS14995 3412558 .. 3412576 -  -2.4  -2.98823   TCCCCGCCATAGAGA             TATAAGGC GTG ACCATATA             ATCACCTTAGTTTTT  42 147
CH53_RS14990 NONE
CH53_RS14985 NONE
CH53_RS14980 NONE
CH53_RS14975 3408223 .. 3408245 -  -3.6  -3.57587   ATTAGCTAAAGAATA           TAATGATATT GAC AATATGATTA           TCGAAGAGCGATTAC  50 267
CH53_RS14960 3404070 .. 3404095 -  -5.4  -3.22774   CACATTTAGTAGCAA         TCGGACTGGC ACTGCA ACCAGTCTGA          TTGCCTGCAATATTA  54 45
CH53_RS14935 3399507 .. 3399520 -  -8.1  -3.19157   GATCAATTGTATTAA               GGCAG AAAA CTGCC                TTATCGAGCACGTTA  65 91
CH53_RS14930 3397812 .. 3397829 -  -3.4  -3.28712   CCCTGTGCTTCACAA             TGG-GGC TTGAT GCCGCCA             TGAATGCCCTTGATG  48 370
CH53_RS14915 3396788 .. 3396811 -    -6  -2.63301   CACATTCTCAGACTA          GTGACCAATA AAGT CAATGGTCAC           TAGTTAGGGTGACAG  54 29
CH53_RS14910 NONE
CH53_RS14905 3392270 .. 3392295 - -11.8  -3.23711   TTTACAATTCATCAA         GCCCGCCACC TTTTAT AGCGGCGGGC          TATCCTTTTATCTGG  83 272
CH53_RS14895 3389985 .. 3390000 -  -7.6  -3.80535   AACGGCGACAAAATA              GCAGAA GGTA TTCTGC               CGGTATGGCTACCGG  70 478
CH53_RS14875 3387455 .. 3387470 -    -4  -3.14132   TCCTCCTTCGATTAA              GGATAGC GTT GC-ATCC              ATCGGTTGAACTCAC  48 61
CH53_RS14870 3386729 .. 3386769 - -14.9  -3.37796   GCTCATGAGGGACAA  CCATACTCAAATCTCCCAC ATT GCAGGGGATTTGAGTATGA  ACACGTCACCGTGGA 100 194
CH53_RS14865 3385310 .. 3385340 - -12.7  -3.43853   GCAAGTACCCAAACA       CCTGTAGCAGAAT GATTT AGTCTGCTACAGG       TCCTCCAAAAGCTCG  87 253
CH53_RS14860 NONE
CH53_RS14855 3381031 .. 3381049 -  -7.4  -3.43187   GAGAAAAATGACTAA             CCAGAAAG AAT CTTACTGG             AACTGCATGGTTCCC  65 71
CH53_RS14850 3379819 .. 3379836 -  -7.7  -4.49556   TCTGGATGAAATAAA             GGATCCA GATG CGGATCC              AATACCATTTTGACT  82 63
CH53_RS14845 3378685 .. 3378695 -  -8.2  -4.43911   AAATCTTAATGAAAA                 GCCC TAA GGGC                 CTTTCATATATAAGC  80 57
CH53_RS14805 3368157 .. 3368167 -  -2.4  -4.08767   GCGAGGTCGGCAAAA                 TGGC ACT GCCT                 ATTTTTCAAGCGGCC  53 31
CH53_RS14800 3367090 .. 3367103 -  -3.1  -3.04652   GGGCCAAATAATAAT               CAGAC CCAT GTCTA                TATATAAGCGTATAT  45 282
CH53_RS14795 NONE
CH53_RS14790 NONE
CH53_RS14785 3365428 .. 3365440 -  -3.5  -3.96447   TTATTAAAAAATCAA                TTTTA GGT TAAAA                GCAATGTTATTAGTA  54 497
CH53_RS14780 3364826 .. 3364859 -  -4.7  -3.13522   ACTTCTGCATGAACA     GAAGTCCAAA-ACTAA TAG TAAGTATTTGGCCTTC     ACTGTTGCGAAGGTG  51 104
CH53_RS14775 3363428 .. 3363455 - -11.5  -3.23899   TTCTAATTAACTTAA        TATAAAGCTGC GAAAAT GCAGCTTTATA         TAGATTAAATTATTT  82 44
CH53_RS14770 3362050 .. 3362080 - -14.9  -3.77671   ACAATAATATAAAGA      GGCGTATG-CCACT CAAC AGTGGACATACGCC       ATTTCTACATAACGG 100 64
CH53_RS14760 3359229 .. 3359250 - -13.7  -3.19192   TTTTAGTGAAGGGAA           GTCGGGCGC TTAG GCACCCGAC            GATCGCTAGGTGTTA  93 41
CH53_RS14755 NONE
CH53_RS14750 3357434 .. 3357460 -  -7.3  -4.05033   CTGATCGCAGACAAA         TCAGGGATTCC GGCGT GGAACCCCTTA         TACTGAAACTGAATA  73 63
CH53_RS14745 NONE
CH53_RS14740 3354672 .. 3354692 -  -5.3    -3.989   AAAAAAGAAAATTAA            GGCATTCTG GTA CTGAAAGCC            AACACCAAATCACAT  63 40
CH53_RS14725 NONE
CH53_RS14720 3350696 .. 3350706 -    -4  -3.52162   TCCATATAAAACATA                 TCAA TAC TTGA                 TGTATTCGAATCCTG  52 81
CH53_RS14675 3345783 .. 3345805 - -10.6  -4.15565   TGCAGTACCTTAAAA           GCCCTAACTA TAC TCGTTAGGGC           TTTTATCGTTTATAG  90 490
CH53_RS14660 3341457 .. 3341489 - -11.5  -3.36327   GTACCTTACTGACAA      CATCGACAAAATGAT GCC ACCACTTTGTCGATA      TTATATTTCGTCCCA  85 184
CH53_RS14650 3339053 .. 3339072 -  -9.2  -3.57263   ATCTTCATTCCCAAA            GCCGCCTA CATC TCGGCGGC             TTTCACTCCGTGTTG  74 190
CH53_RS14645 3338142 .. 3338156 -  -2.8  -2.91924   GCATGCTGGATAAAG               GTTTCG AGC CGAAAA               ACAAACTCAATCTAG  42 280
CH53_RS14640 3337760 .. 3337773 -  -2.3  -2.72463   ACGTATGCGGAATCA               CCGAT ATTT AACGG                GTTGAGCATTCATTC  40 35
CH53_RS21895 NONE
CH53_RS14630 3335163 .. 3335176 -  -3.7  -3.63054   GAAATGCAGACAGAA               CAGGG GCAT CCCAG                CGGCTGCCTTATCGC  53 365
CH53_RS14620 3333140 .. 3333154 - -11.4  -2.56596   GCGGTCACGAATTGA               GCGCGA TAT TCGCGC               CGGTATACTCCCGGC  75 341
CH53_RS14610 3332037 .. 3332050 -  -4.5  -3.72576   CGGCGGGTTATGAAA               GGTGGC AGT GCC-CC               ATATTTCTGCAGCTA  56 113
CH53_RS14600 3330205 .. 3330218 -  -3.9   -3.6269   TCACCGATAGAAAGA               TATGA TCGA TCATA                GAGCCTCCTGTCATC  54 42
CH53_RS14595 NONE
CH53_RS14590 3328489 .. 3328503 -  -5.6   -4.0371   TAGTTTTCAGAGAAA               TTGCCG GCC CGGCTA               TTGTTTCGGAGGTGG  64 355
CH53_RS14575 3325800 .. 3325816 -  -2.3   -4.3255   GGCCGAAGGAATAAA              TATCG GCGGTAT CGATA              AAGTTAGCCCCGCCG  59 270
CH53_RS14550 3320393 .. 3320417 -   -10  -3.86822   GAATTTGCCGACAAA          GCAGGAGAGC GCTCT GTTCTCCTGC          TGCGGATACTCTCCA  84 82
CH53_RS14540 3318158 .. 3318182 -  -4.9  -4.49088   GAAATCAAAAAAAGA          GATACGGCCAA TAT TTTGCCGCAGC          GTGAATCTATGTACG  71 140
CH53_RS14505 NONE
CH53_RS14500 3313539 .. 3313569 -  -9.1  -5.47218   CTGCATCTAAAAAAA      TTGCGGTT-CTGGT GCTG ACCAGTAACCGCAT       TTTTTTGCCCTTATC  95 98
CH53_RS14490 NONE
CH53_RS14485 3310441 .. 3310460 -  -4.2  -2.77043   CCCATGAGTGTAAAG            CTCCTGTG ATTG CACAAGCG             TCGGCCAGAATGATT  46 171
        purE NONE
CH53_RS14475 3308757 .. 3308775 -  -3.9  -2.86164   TCCGCAATTATGACA            GTTAGCCC ACTT GGG-TAAC             CTGGCGTTGCAGTGT  46 80
CH53_RS14460 3304964 .. 3304977 -  -5.3  -2.74488   CAATCACCTGAATCA               CTTAC TGAT GTAAG                CTCAGCGGGATTTTC  49 88
CH53_RS14455 NONE
CH53_RS14450 3303083 .. 3303105 - -15.6  -4.34402   TGTCGCAGAGTAAAA           CTGCGCGAGA TGA TCCCGCGCAG           CAGCAAATAAGGAGA 100 75
CH53_RS14445 NONE
CH53_RS14440 3301085 .. 3301097 -  -3.3  -5.75945   ATGTCGCAAAAAAAA                CCGGC TTA ACCAG                CAAAGCCATTCGTTT  91 522
        copA 3297970 .. 3297996 -  -9.5  -3.71917   ATGCTAAACGCTAAA         TGGCGCACA TGAAAGTAT TGTGCGCCA         TTAGGTTATACTCTT  79 137
CH53_RS14425 NONE
CH53_RS14420 3296126 .. 3296138 -  -4.1  -3.08046   TGGCTACCCGAAAAT                CGATA CCC TACCG                GGCTATGTGAACACC  47 239
CH53_RS14410 3293071 .. 3293100 -    -8  -2.78154   TTACACAGGGAACTA       TCCCGACT-AAAG TAACG CTCTCAGTCGGGA       TTATAAGGCTGTTAC  62 43
CH53_RS14405 3290921 .. 3290935 -  -5.7  -3.53761   CAAGCGGCGTTCAAA               TCTGC TCCCG GCAGA               TTTGTCACCTCAGTC  58 140
CH53_RS14320 NONE
CH53_RS14315 3269855 .. 3269883 - -11.7   -3.8211   TGCCAGGTATAACAA        TCTGGTGGTCATC AAC GGTGACCGCCAGA        TTATTCGATGAATAT  91 78
CH53_RS14300 3267569 .. 3267587 -  -2.4  -2.72739   TTCAACTGACATAAT             CTAACCAA CAT TTGATTTG             CAGTTAATCGGGAAG  40 293
CH53_RS14295 3267348 .. 3267358 -  -5.4  -2.88544   GGGTAGGTTCATATA                 GTGA GTA TCAC                 TGAGGCGACACTCTG  52 77
CH53_RS14275 NONE
CH53_RS14270 3258042 .. 3258078 - -12.6    -4.614   TTCAAGTACAGAAAA   TAA-AAAACCCGCAAAC CTAA GTCTGCGGGTTTTCTTA    ATGATGTATTGCATC 100 60
CH53_RS14265 NONE
        rpmJ 3257495 .. 3257517 - -14.9  -5.15969   CTTTAACTGAAAAAA           GCCCCGTTG GGCAG CAACGGGGC           TTATCAAAACCATCC 100 57
CH53_RS14240 3253652 .. 3253679 -  -2.8  -2.95223   CAATGTGAGTAGATA        GATAATCATATA ATTG TATAAGTTTATC         GTTAACGCAAATAAA  43 101
CH53_RS14235 NONE
CH53_RS14230 3252924 .. 3252942 - -11.8  -3.05463   ACCTGGTTCATTGAA             GCCGATAA CGT TTATCGGC             TCAACGTTGTGTGTC  82 60
CH53_RS14225 3251588 .. 3251598 -  -8.2  -4.14627   TTGCTATAGAAACAA                 CCCC AGG GGGG                 CCTGCTACAATACAG  77 170
CH53_RS14215 3249937 .. 3249961 - -15.1  -3.86935   TAATGATGATAACAA          TAGGGGCGATA TAA CATCGCCCCTA          TTCTATTTTGAGAAC 100 43
CH53_RS14185 3242561 .. 3242598 -  -8.6  -4.07568   TTTTTTCTTCCAAAA   TTCGGTTTTCCCGT GTTATTCATG ATGGGAAAACCGAA    TTTTATCAGATAATT  79 39
CH53_RS14175 NONE
CH53_RS14170 3238683 .. 3238702 - -13.6  -3.00476   AGTGGTAACGATATA            CCTCGCTC TGAT GAGCGAGG             CCGTTATAAGAACAG  93 82
CH53_RS14120 NONE
        ampG 3224540 .. 3224559 - -13.6    -5.252   TACGTGCATAAAAAA            GGCCGGTA TCAG TACCGGCC             TGTGTCATCTAATAC 100 47
CH53_RS14110 3223498 .. 3223528 - -11.3  -3.51998   GTAAATTAAAATATA      TTCCGAGGTGATCT AAAT AG-CCACCTCGGAA       TCATTCAGCTAGAAA  88 34
CH53_RS14105 NONE
CH53_RS14100 NONE
CH53_RS14095 NONE
CH53_RS14090 3219279 .. 3219293 -  -2.8  -3.05596   CAGCTCTTCAGTCAA               CCATCA TAT TGATGT               TGAGGTTGTACATAA  43 3
CH53_RS14085 3218308 .. 3218337 -  -9.3  -5.27335   GGGCGGAAATAAAAA       GTGGCTGGCAG TAATAGGC CCACCAGCCAC        TCTATTCGTATCTAT  93 55
CH53_RS14080 3216721 .. 3216749 - -16.2  -3.01119   ATCGATGGATATACA        GGTACAAAGGTG CTGTT CACCTTTGTACC        ACAATGTATTCCTAT 100 37
CH53_RS14070 NONE
CH53_RS14065 3214391 .. 3214414 -  -7.4  -3.37344   CGCGTAGCTAACCAA          CCCTGCGG-CT TCA AGTCCGAAGGG          TATAGTTATAAATCC  65 12
CH53_RS14055 NONE
CH53_RS14050 NONE
CH53_RS14045 3209018 .. 3209031 -  -6.7  -2.73364   CGCTTACCCGAATCA               CTGAC TCAT GTCAG                CTCATCGGGATGCAC  56 305
CH53_RS13980 NONE
CH53_RS13975 3195644 .. 3195667 - -15.4  -5.32882   TATCAGCATAAAAAA          GCCAGTCAGT GTGA ACTGACTGGC           TTGATACCCCTGAGC 100 66
CH53_RS13970 3193138 .. 3193163 -  -6.1  -3.62478   TAATGAAGTGGTAAA         TTCCCCATCGA TAGG TTGATGGGGGA          TCTCTGCTATTAATC  64 62
CH53_RS13930 NONE
CH53_RS13925 3178526 .. 3178536 -  -6.8  -3.86822   TAACTGCTGTATAAA                 TCGG TTC CCGA                 CCGATTTATAGCTCG  69 83
CH53_RS13915 3175989 .. 3176022 - -11.9  -2.71815   GAGCTAAAGAATTCA     GATACTCGCCCTCTCA TCA CGAAAGGGCGA-TATC     AGCTTAAGGTGTGTT  81 52
CH53_RS13885 3170899 .. 3170915 -  -6.5  -4.89393   GAAATCTTACAAAAA              CCAACTG CAA CAGATGG              GCGAGGATAAAAAGC  82 217
CH53_RS13825 3149783 .. 3149803 - -10.4   -5.5112   GCGATCAATAAAAAA           CGGCGG-GC CAAA GCGCCGCCG            TTATCATCTAAAGAT 100 54
CH53_RS13810 3145957 .. 3145987 - -15.5  -3.63054   CAAATTTAGACAGAA       CCCCCCAGCCAAC TCAGT ATTGACTGGGGGG       TTTATATTTACACTT 100 129
CH53_RS13765 3137463 .. 3137484 -  -8.7  -3.94746   TGACAGGTAATGAAA           CCTGGCACA AAAT TGCACCAGG            TGAATTTGCATTATT  73 36
        fadE 3133329 .. 3133346 -  -8.4  -5.70829   AAGATGATAAAAAAA             GCCTCC TGAAGC GGAGGC              TTGAGTAGACACTTA 100 60
CH53_RS13725 3119540 .. 3119554 -  -2.8  -4.37092   ACTTTGGGGATAAAA               TTGCAA ACA TTGCTA               ATTCTTTGGTTGGAA  60 23
CH53_RS13705 NONE
CH53_RS13700 3115135 .. 3115153 -  -2.2  -2.55074   CTGAAGCGCAAGTCA             TTGCCGCA CGC CGCGGCCT             GATTTTTTCGTCAGA  39 361
CH53_RS13675 3110085 .. 3110103 -  -7.5  -3.52079   TAATATGTTAGATAA             CATTACC AGAGA GGTAATG             GTCTTAATACCCTAT  66 90
CH53_RS13670 NONE
CH53_RS13665 NONE
CH53_RS13660 3107821 .. 3107855 -  -6.4  -2.71364   TTATTTTGTGAACCA     CCACTGACCGGTGCCT GAT AGCCACCACTCAATGA     ACGGATCAAATTAAT  54 419
CH53_RS13655 3106569 .. 3106579 -  -2.4  -2.87132   TTTTTGTGCCACAGA                 GGCC TCC GGCG                 CGCTTAACTTGCATT  41 51
        emrB 3104985 .. 3105009 - -12.9  -5.04601   GCTATAAAGTAAAAA          GGGCGCTGA TGATAAG TCAGCGCCC          TTTTTGTTGCTCGGT 100 49
CH53_RS13640 3103055 .. 3103086 - -10.2  -6.14618   CATAAAACAAAAAAA      CAATGCCCCGACAA AAAA CTGTCAGGGCATCA       ATTTCACCGAGTGAC 100 79
CH53_RS13635 3102061 .. 3102073 -  -3.3  -2.52795   AATGCTTCTAATCCA                CGTTG GCT CATCG                TTTATCCCCGTCATC  42 181
CH53_RS13630 NONE
        pssA 3097870 .. 3097886 -  -7.2   -5.4251   GTGAGATACAAAAAA              CCCGGC AGATA ACCGGG              CTTTCATATTTAAAG  93 35
CH53_RS13620 3097061 .. 3097074 -  -8.1   -3.6215   CGAATGCAGTTTAAA               CAGCG CCTG CGCTG                GCCCCTTTAGGGGTG  70 449
        metN NONE
CH53_RS13580 3088458 .. 3088477 -  -2.9   -3.6682   GTTCACTTACCCAAA            CCACTTA TTTAAG TAAGTGA             TTCGGGGTGTGTTCG  50 93
        metQ 3087448 .. 3087471 - -16.8  -3.97674   CTATGATGCAAATAA          CAAGACGGGC CATG GCCCGTCTTG           CAATATATTTAGCAA 100 89
        rcsF 3086979 .. 3086990 -    -3  -2.70115   TAAAGGAAAATACAC                TCAT TTTG ATGA                 AACGTTCAGTGCAGA  41 14
CH53_RS13565 NONE
CH53_RS13560 3084396 .. 3084426 -   -12  -5.06414   TTGCTGCAATAAAAA      GCCGCTGG-TAGT GAGTTA ACTATCCAGCGGC       TCAGCGGTTTACTTA 100 48
CH53_RS13540 NONE
CH53_RS13535 3081879 .. 3081910 -   -13  -3.42354   CACGTCAAGTCAGAA      GAGGACGGGCCACT TTTC AGCGGCCCATCATC       AATATCACGGGATGA  93 43
CH53_RS13425 3055849 .. 3055864 - -11.8  -5.26316   GCAGCCCATAAAAAA              GCCGGC GGCT GCCGGC               TTGTCATTATTACTC 100 35
CH53_RS13420 NONE
        dapD 3052101 .. 3052121 -  -8.3  -5.75822   CACAAAGCAAAAAAA            TAGCGGG TGATTAG CCCGCTA            TGTTCATCTTAGTCG 100 34
CH53_RS13410 NONE
        queF 3047560 .. 3047572 -  -3.4  -3.04144   CGCCTACCTGCAACA                CCAA TTACT TTGG                GTATATCAGAATGCT  45 208
CH53_RS13380 3045984 .. 3046001 -  -2.6  -3.21354   TTATATAGTCATTAA             GCCAGA TTAGTG TCGGGC              AGCCACACGGCTAAG  44 75
CH53_RS13375 3044742 .. 3044759 -  -3.3  -3.55444   GTGCGATGGCGCAAA             GCCTGAT GGAT ACCGGGC              AGGTAACCCATCACC  50 474
CH53_RS13350 NONE
CH53_RS13345 3039944 .. 3039957 -  -3.1  -3.59979   GCCCGTCAGGCGAAA               TAACG CTTA CGCTA                CATATTGGGCTGCGA  50 18
CH53_RS13330 NONE
CH53_RS13325 NONE
CH53_RS13320 3037170 .. 3037183 -  -8.1  -6.02919   GTAGAAACAAAAAAA               CACCC TTAA GGGTG                TCTGATGTTGATATG 100 56
CH53_RS13310 3034030 .. 3034040 -  -6.8  -3.34013   TACGGTGTTAAGCAA                 TGCG ATA CGCA                 CACCGACACTTCGTC  59 262
CH53_RS13240 3013365 .. 3013378 -  -5.3  -2.73681   TACTCACCCGAATCA               CTTAC TTGA GTAAG                CTCATCGGGATTCAT  49 120
CH53_RS13235 3012405 .. 3012427 -  -5.5   -3.7046   TAAAAAAGTGGTAAA          CGGGGC-CAG TGAA CTGCGCCCAG           AGGGTGATATGCTCG  59 133
         tas 3010655 .. 3010669 -  -2.7  -4.55826   CTTAAAACAGTAAAA               CGCTG TTTAC CGGCG               GGGGTATTAATTGGT  65 478
CH53_RS13205 NONE
CH53_RS13200 3003370 .. 3003392 - -10.7  -4.25283   ATTTTGTTATCAAAA           GGATAAGCT GAATT AGCTTATCC           AAAAAGTCCTCAGCC  90 72
CH53_RS13190 NONE
CH53_RS13180 NONE
CH53_RS13175 2998098 .. 2998125 -  -4.8  -4.41206   AATGACGTGACAAAA        TTGAATGCTGAG TTAG CCCAGCAGTCCA         CATGTGCATCGGAAG  67 147
CH53_RS13155 2994432 .. 2994443 -  -4.4  -2.66634   GACTGTATTACATTA                CCAT TATT ATGG                 ATGGGGCTTATTTTG  44 360
CH53_RS13080 2981058 .. 2981084 - -10.2  -3.52192   CTTAATGCGATAGAA        CGGGTTGCGCC CATTTC GGC-CAACCCG         TATTTTGCTCTCTAT  79 267
CH53_RS13060 2976565 .. 2976576 -  -7.2  -3.01712   TTGTTTCTGGCAACA                GCGC AGTT GCGC                 CGTTACCGGGTTAAT  61 45
CH53_RS13055 2974100 .. 2974128 - -13.3  -4.19817   GTTATCGATGGAAAA        GAAACGGGTTC TGACATG GAACCCGTTTC        TATGTTGACTATCAG 100 45
CH53_RS13045 2973018 .. 2973032 -  -4.2  -2.67428   TTTACCAATAACTCA               CCGCTC TAT GAACAG               AGTAGTTTTGCCGTT  45 49
CH53_RS13035 2970553 .. 2970563 -  -5.4  -2.72991   TGACATTCGTAAGCA                 GTTC ATT GAAC                 TAGGTAGGTGCGGAT  51 164
CH53_RS13030 2969476 .. 2969490 -  -8.6  -2.84794   TCAATGGTAGAACGA               GAGCTT CCC AAGCTC               TATACGAGGGTTCGA  62 475
CH53_RS12995 2962276 .. 2962294 - -11.7  -2.76708   CAAGGGATACAGAAG             CGGGCAC ATCAA GTGCCCG             TTTGGCTGACTACAG  81 35
        ygfZ 2956539 .. 2956560 - -11.5  -2.94924   GCCGCATGCATAAAT           TGAGGCCGG ATAA CCGGCCTCT            GGTTCGAATAATGCT  81 39
CH53_RS12955 2954848 .. 2954887 -  -5.1  -3.66251   GGAAAATAAAACAGA TGCGGTT-TGCCAGTCGAT TGAG ATAG-CTGGCCTAACCGCA  TGGACTTCAACATGA  58 41
CH53_RS12910 2943532 .. 2943554 -  -2.6  -3.89346   GGGTTACCCGATAAA           GAGGGGATCT CCG AGATGCCGCC           GCAGGCTGTAACCCT  53 227
CH53_RS12905 2942768 .. 2942794 - -10.2  -3.84961   TATTGAATGACTAAA         CACCCGCTATCT ATA AAATATCGGGTG         TTTTTTTATTTTGCA  84 51
CH53_RS12890 2939290 .. 2939304 -  -3.4  -4.11216   CCCGCATGTTTAAAA               GCGCTG AAG CGGCAC               CTGCCAATGATGCAG  58 131
CH53_RS12850 2929257 .. 2929283 - -13.8  -2.57003   TCAGTAATAAGAGAG         TAACGCCCGCAA AAA TCACGGGCGTTA         TACAGTGATAATTGA  91 47
CH53_RS12835 2924292 .. 2924306 - -12.8  -5.64274   TTAGTGATAAAAAAA               CCCCGC CAG GCGGGG               TTTTTACTGTTCAGC 100 57
CH53_RS12815 NONE
CH53_RS12810 NONE
CH53_RS12805 NONE
CH53_RS12800 2919826 .. 2919836 -  -6.8  -3.53761   TAACTGCTGTTCAAA                 TCGG TTC CCGA                 CCAATTTGTTACTCT  64 88
CH53_RS12795 NONE
CH53_RS12790 2918472 .. 2918486 -  -7.1  -5.25805   AATAAATGTAAAAAA               CACCC GCATG GGGTG               TGCAATATTTTGAGC  90 167
CH53_RS12785 NONE
CH53_RS12780 2916393 .. 2916416 -    -6  -2.71144   GATTCGGGTGAATGA          GAGCCGCTAAC ACC GCCA-CGGCTC          CAAGTACGAAGGGTA  54 42
CH53_RS12770 2914260 .. 2914282 -  -8.4   -3.3482   GAAGGTGTTAATTAA           CATTAGCGGC TCT GACGCCAATG           ACTTTGGGGGTTAAG  70 36
CH53_RS12765 2913298 .. 2913308 -    -4  -3.74077   TTGGATATACGCAAA                 TAGA GAT TCTA                 TCACGTACTTTATAC  54 101
CH53_RS12760 NONE
CH53_RS12755 NONE
CH53_RS12750 NONE
CH53_RS12745 2910592 .. 2910625 - -12.6   -3.6502   CAGGGGGGAGCTAAA     GCAGGTTCAGGT TGTGGGCTTC ACCTGAACCTGC      TTTTTTACGCATCAA  90 43
CH53_RS12720 NONE
CH53_RS12715 2906004 .. 2906023 -  -8.5  -2.55216   GATGAGGCATAACAG            CGGGGCC AGCGCA GACCCCG             TGTGGTTACTTACTC  64 31
        mltC 2904780 .. 2904802 -  -3.4  -5.03994   CTTTAGATATAAAAA           TGGCACAG GGGTTAG CTGTGCTA           TTCCAATTGTCCTTA  72 118
CH53_RS12705 2903844 .. 2903895 - -14.7  -2.73441   CATTACGCCGTAAAC TGAGGTATTGTTAGACAGCCGAT GAAAGT ATCGGCTGTCTAACAAAAAATCA TTACAAATTAGGAAT  95 42
CH53_RS12695 2900910 .. 2900925 -  -6.8  -5.54079   CCAAAAAGCAAAAAA              CCAGCC GCTA AGCTGG               TTTCTTTAAATAGTG 100 39
CH53_RS12690 2900521 .. 2900533 -  -9.1  -2.88544   CCTGATTTTTATACA                GGCCT TCG AGGCC                GTCTAGTTGTTGAGG  68 119
CH53_RS12680 NONE
CH53_RS12675 NONE
CH53_RS12670 2897751 .. 2897763 -  -4.1  -2.68223   CATTGATACGATAAG                CTTAC TTA GCAAG                GGGGTACAAAAAAAC  45 49
CH53_RS12665 2896064 .. 2896082 -  -7.4   -3.6692   CCTGATCGGAAAATA             CGTGCCTG GAC CAAGCACA             ATAGGCATTCTTTGG  68 178
CH53_RS12660 NONE
CH53_RS12645 2888901 .. 2888915 -  -3.6  -3.63805   ACCTGACATTGGAAA               TGAATA TTT TATCCA               TGATGTTAATTTTTA  52 107
CH53_RS12550 2859771 .. 2859783 -  -3.3  -3.46602   CGGGGGACATCATAA                GACTC CTC GTGTC                CCTGGGCGGGCTTTC  50 7
CH53_RS12545 NONE
CH53_RS12540 2857509 .. 2857530 -  -4.5  -3.73647   GGCACCCACTAATAA           TATGAAAAG CTCC CTTTTCATG            GCTGGTTACTCCTGT  56 31
CH53_RS12535 2856472 .. 2856486 -  -2.8  -4.13816   CTCACAAAAATAGAA               GATGCA GAC TGCATA               AATGTTCCGTGTAAA  55 64
CH53_RS12530 NONE
CH53_RS12525 NONE
CH53_RS12520 NONE
CH53_RS12515 2852283 .. 2852311 - -10.5  -4.36262   ATATTTAGATGAAAA        TCACTTCACAT GATATAT ATGTGAAGTGA        TTTTTTTTGCTTGTA  90 41
CH53_RS12500 2849717 .. 2849727 -  -5.4  -3.42481   GCGATTAAAACAAAT                 GATC GCC GATC                 GTGTCTATCGTTTGG  56 147
CH53_RS12495 2848700 .. 2848713 -  -6.7  -3.28791   ACGCTTTTGGGACAA               GGGAT ACGT ATCCC                TCAGGATATTGCGGT  59 468
CH53_RS12485 2846410 .. 2846421 -  -2.2  -2.96711   TCGATAATTTACACA                GC-GC CTT GCTGC                AAAAATGATTGCTCA  42 7
CH53_RS12480 2844882 .. 2844900 -   -11  -3.79874   TTCCAGATAATATAA             TGCCAGCC AGA GACTGGCA             GAAATAAAAATGCAC  86 72
CH53_RS12475 2843571 .. 2843582 -    -3  -3.32343   CCCAGAGTGTTAGAA                GTTA TAAG TAAC                 GCCAACCACGGTGAA  46 8
CH53_RS12470 NONE
CH53_RS12465 2841036 .. 2841048 -  -3.4  -4.21194   GCTGATGATTTAAAA                GTTG TAATC CAAC                ATCAGTTTATAGTTA  59 7
CH53_RS12460 2839730 .. 2839749 -   -10  -5.42975   GTATACAAACAAAAA            CGGACCTC CATG GAGATCCG             TTGATATGAATTTGG 100 249
CH53_RS12365 2822849 .. 2822860 -    -3   -4.4648   ATCTCCACGAGAAAA                TGAA GTAC TTCA                 TTGGGCCAGTATGGG  62 178
CH53_RS12350 NONE
CH53_RS12345 2817563 .. 2817574 -  -2.2  -2.81312   AATCCATTCAGGACA                CTGC AAGT GCAA                 CATTCCCTCTGTTGC  41 464
CH53_RS12335 NONE
CH53_RS12330 2814187 .. 2814229 - -16.7  -3.14468   CGCCATGACATCCAA TAACAATCATGAGCCTGCAT TTCA AT-CAGGCTCATGACTGTTA AGTAAACATTTACGG 100 150
CH53_RS12325 NONE
CH53_RS12320 2810384 .. 2810396 -  -2.6  -2.72385   AAACCTAATCAGAAT                GAGC TATCG GCCC                TTATTGGGCGGGAGT  41 496
CH53_RS12230 NONE
CH53_RS12225 NONE
CH53_RS12220 2790697 .. 2790743 -  -5.1  -4.17491   AGCAAAGCGGCAAAA TTTGCCAGTGATACTGTTGGC GCTTG GCTTACAGTATCACTGGGGGA TTACGGCTTACAGTG  65 26
CH53_RS12205 2786955 .. 2786967 -  -3.3  -3.93744   GTATAAATAATAGAA                GGTTG AAA CAGCC                GAGGGTGTAGATGCT  54 238
CH53_RS21885 2785596 .. 2785607 -  -3.6  -4.57569   GCAGTGGGTGAAAAA                CGGC ATAT ACCG                 ACTCTTCACTGTATG  64 221
CH53_RS21880 2784422 .. 2784453 -    -8  -3.19668   CACCAGTTAAGCTAA      CACCATCGCCAC TAGTTAAT GTGGCGTTAGTG       ATATTGAAAACAGGG  65 516
CH53_RS12190 2782292 .. 2782303 -  -5.8  -3.63744   TGCGCCGGTAAAATA                CCTG AAAT CAGG                 GTGTTGCTGTTGCCA  60 57
CH53_RS12185 NONE
CH53_RS12180 NONE
CH53_RS12175 2779891 .. 2779916 -  -3.3  -3.28712   TCGGGGGCTGGAGAA         TCAGAGCTACCG TGC CAGTGG-TCTGA         CGTTGCTGACGGCGG  48 449
CH53_RS12165 NONE
CH53_RS12160 NONE
CH53_RS12155 2777424 .. 2777440 -  -3.7  -5.07486   TAGCGTCAATAAAAA              CTAGATG TTT CATTTAG              TTACCTCATTAACGT  74 177
CH53_RS12150 2776147 .. 2776185 - -13.2  -2.52896   CTATTTTGCAAGGGA   CGCCCGTGTTACTGGTGC CAT GCACCAGTAACAAAGCCA   TAGCGAATATGACGC  90 51
CH53_RS21875 NONE
CH53_RS12130 2772411 .. 2772444 - -10.5  -2.76189   TAACTGATTTAAGTA     TTAACGTGGCAGT AACTCTGG ACTACCACGTTAA      TTTTGTTCGCCAGAA  73 56
CH53_RS21870 NONE
CH53_RS12085 2763093 .. 2763103 -  -6.8  -2.55253   ATGAATGGCAATTCA                 GTGC GTT GCAC                 AAATAAATACTGGTG  56 12
CH53_RS12055 2755911 .. 2755924 -  -2.3  -3.86897   GTCAGTGGGTACAAA               TTCCG GCAG CGGCA                CGAGTTGCCGCACAA  52 236
CH53_RS12040 NONE
CH53_RS12035 NONE
CH53_RS12030 NONE
CH53_RS12025 2748038 .. 2748048 -  -3.2  -3.29704   CCGCCAGCAAACACA                 TCCC GAT GAGA                 TTACTCAAGTAAGTG  48 26
CH53_RS12020 2745708 .. 2745733 -  -6.9  -5.09426   GTTAAGGTGAAAAAA         CGAGCGTAA CTACATGT TTACGCCCG          TTTTTATCCCGTTAT  85 40
CH53_RS11995 2739370 .. 2739382 -  -3.3  -4.35926   ACGCCAAACTGAAAA                TTGCG ATT CGCGA                TTTTGATAATGCGTT  63 477
CH53_RS11940 2724662 .. 2724675 -  -6.7  -2.50113   GATCATGGCATTAAG               TGGTC TGGC GACCA                TGGGGCGTGGCGTGG  52 467
CH53_RS11870 2709753 .. 2709772 -  -3.5  -3.69333   GAGAATGTAGTGAAA            CCGGC AGCGAAGAAA GCCGG             ATAGTTATGTTCATC  52 149
CH53_RS11860 2707280 .. 2707301 - -13.1   -3.5456   AATGGTAAGAATTAA           TGAGCCTCA TCCT TGAGGCTCA            CCCTACTGTTACTCT  95 34
CH53_RS11845 NONE
CH53_RS11840 NONE
CH53_RS11835 NONE
        fecE 2699365 .. 2699390 -  -6.2  -3.36289   TATCAGGTCAATCAA        GCCATGAGCGCA GCAC TGCGC-CA-GGC         AGGGCATCGATTACA  57 175
CH53_RS11820 2697304 .. 2697325 -  -2.2  -3.63878   ATAGAATAAGCACAA           CACACCAC GGTTAA GTGGCCTG            AAGAAAACGGTTATT  49 52
CH53_RS11815 NONE
CH53_RS11810 NONE
CH53_RS11805 NONE
CH53_RS11800 2690894 .. 2690924 - -10.5  -2.60982   AGAAAGCGTGAGAAT       GCCCTCAATCTTA TCTGG CAAGAGTGAGGGC       GATGAGAATTTTATT  72 36
CH53_RS11790 2688946 .. 2688957 -  -5.8  -3.60151   CCTTTTAAATGATAA                GGGA GTAT TCCC                 GATTTTTAAATATAA  58 188
CH53_RS11785 2688619 .. 2688641 - -12.1  -5.45802   TTCCTAAAACAAAAA           CATGGCAAC GATAA GTTGCCATG           TGAAAATCCTGATAA 100 66
CH53_RS11780 NONE
CH53_RS11775 NONE
CH53_RS11770 NONE
CH53_RS11765 NONE
CH53_RS11760 NONE
CH53_RS11755 NONE
CH53_RS11750 NONE
CH53_RS11745 NONE
CH53_RS11740 NONE
CH53_RS11735 NONE
CH53_RS11730 2678174 .. 2678203 - -14.9  -3.04515   AAATAGTCTGCAATA       CAGGCGCGGTTGC TGTT GCCGCCGCGCCTG        ATATTAATCTTTCGG 100 142
CH53_RS11715 2675007 .. 2675029 -  -4.9  -3.18735   GTAAGAGGGGATTAA          TGCGCAGATA TTGT TACC-GCGCA           TTAACAGATCATATC  53 52
CH53_RS11710 2674137 .. 2674155 -   -16   -5.2204   CACAAGTAATAAAAA             CCGGCGCT GTA AGCGCCGG             TTAACTGCATGAGTA 100 58
CH53_RS11700 2671724 .. 2671750 - -13.9  -3.14393   AGTAGATATTGAATA         GAAGGCATTCT GTTCG AGAATGCCTTC         TGTGTGAAGCCCGTA  93 60
        dkgA 2670497 .. 2670524 -  -2.6   -5.1861   GTTATCAGCAAAAAA        CCGCAGGT-TGCC AGT AGCACACCGGTGG        CTAAACCGTCAGTAA  77 136
CH53_RS11685 NONE
CH53_RS11680 2667632 .. 2667661 -  -6.4  -2.72144   TGAGTGGCTTTAAAT       GATCAGGAAGGC AAATCG GTCTTCCTGCTC        TTCGGCTTGCAATAA  54 70
CH53_RS11660 2661818 .. 2661832 -  -2.1  -2.50113   TATTATCGGATTAAG               TCCGA GACTT TCAGA               TTGCTATACCCTGAT  39 52
CH53_RS11655 NONE
CH53_RS11650 2660063 .. 2660110 -    -7  -4.11394   AGCCCACTGGCAAAA CGCCCATGG-CCGGTGATGATAA TGC TTACCATAAAAGGTCCTTGGGCG CTGGCCGTTAGCCAG  71 70
CH53_RS11645 NONE
CH53_RS11635 2657670 .. 2657692 -  -2.6  -4.20834   GCGAAAATAATCAAA           GCGTTAGCAA TGT TAGCCAATGC           TATTTAGCTTTTCCA  57 15
CH53_RS11615 2653232 .. 2653246 -  -2.8  -4.57569   TGATTTCTGCAAAAA               CGGTAA TCA TTACGG               CCTCTATTTATCTCG  62 50
CH53_RS11610 2652739 .. 2652750 -  -4.4  -3.63991   GATGATGCGGAAGAA                CAGA TTGC TCTG                 CGGCGGTTGAAGCCG  56 211
CH53_RS11580 2645819 .. 2645843 -   -15  -5.45652   AGGGGGAATAAAAAA          CGGGCACAGC CTGAT GCTGCGCCCG          GAGAGTCCGAACCTG 100 46
CH53_RS11575 NONE
CH53_RS11570 2643402 .. 2643418 -  -3.7  -3.05816   CCATCCTTTAGTGAA              CTTTATG CAA CATGAAG              GGGCCGCGCTATCTA  45 365
CH53_RS11555 2641059 .. 2641087 -   -11  -2.73007   AATATCCTCGTAAAC        TCAGGGCGCGAT ATCGA ACTGCGCCCTGA        TCATCACGAATGACA  76 53
CH53_RS11530 2632691 .. 2632710 -  -9.2   -3.0614   CAGATTAAACAAGCA            GGCCACCC TGGC GGGCAGCC             GAACGCGTCGATTTT  69 61
CH53_RS11525 2631264 .. 2631281 - -11.3  -5.88197   CGAAATATAAAAAAA             GCCCTGA TTAA TCAGGGC              TTTTTGTTATCAGTG 100 44
CH53_RS11510 NONE
CH53_RS11505 2628174 .. 2628194 -  -3.8  -2.83164   GTACCGATGATCAGA            CCCGTGCG GATAT CGCTCGTG            CATTTGAAGATGCGG  45 523
        rpsU 2626792 .. 2626819 - -13.4  -3.94823   CATAAACGAGAACAA        GCCGCGCATTCC TTTC GGAAAGCACGGC         CTTCGTATGCAACTA 100 99
        dnaG NONE
CH53_RS11485 2622960 .. 2622987 - -12.8  -4.56597   TTTTTCGGCTAAAAA        GAAAAACCCCGG CATG CCGGGGTTTTTG         TGTGTTTGCTGCTGT 100 50
CH53_RS11480 2622682 .. 2622699 -  -9.9   -5.5604   TTAACTAATAAAAAA             GCCAACT CGAA AGTTGGC              TTAATGTACTGATTT 100 54
CH53_RS11460 2610682 .. 2610696 -  -5.6  -3.14564   TTATGGCTTCAGTAA               GGGCGA GTG TCGCTC               AATACTGCCCGTCAT  54 83
CH53_RS11450 2609282 .. 2609303 - -10.3  -3.12668   CATTCTTATACTGAA           TACGTTATC AACT GATAACGTA            TTTAATCGCCTCTGG  75 47
CH53_RS11435 NONE
CH53_RS11430 2606352 .. 2606376 -  -7.2  -2.79183   CGTATTTCCAGGACA          GCGGTATC GCAATTCAG GATACCGC          TGCGAATAATGTGTT  60 42
CH53_RS11425 2605302 .. 2605326 -  -3.5  -4.46212   CGTCGGAGTATAAAA          GCTGACTATAG CAC CTTCAGTCAGG          CCATTTTACTGGGCG  62 50
CH53_RS11420 2604399 .. 2604411 -  -4.8  -2.73771   TTACAGCGCTTAAAT                CGGT GCTCG ACCG                GCCTTGCCTGAAATT  49 175
CH53_RS11415 2603912 .. 2603946 - -13.8  -3.84514   ACGTGAAGTATTAAA     CGAAGGAATTATACCT ATA AAGTATATTTCCTTCG     TCTCTAGCGATGGCT 100 68
        fadH 2601540 .. 2601596 -  -6.6  -3.57971   ATAGCGATTTCTAAA TACCCTTCGTACTTGAAGCCGCAG GGGTGTTAG CTGCGACTCCAATTACTTTGGGTA TTCCCTACTTGAAGC  64 85
CH53_RS11400 2598440 .. 2598482 -  -2.6  -5.08601   TGACTCGAATAAAAA GTACCAATACCAGCATCACG TTA CACTTTGCTGGTACTGGTTT TTAGTTAGTAAATTA  70 54
CH53_RS11395 2597620 .. 2597637 -  -2.1  -2.79188   CAGCGAAGCGAATCA             TAGTGAAC TCC GTT-ACTA             CAGAAGAAAAACACG  41 198
CH53_RS11390 2596383 .. 2596408 - -13.3  -5.61881   TCTTAAAAACAAAAA         CGGCCAACGTC GGAA GACGCTAGCCG          CTATGTCTGAGCTGC 100 242
CH53_RS11385 2595325 .. 2595347 - -10.6  -4.24887   AATATACGGAATAAA           TGCGGGGT TATTGCC ACCCCGCA           TAATAGATTGTAGCG  90 50
CH53_RS11380 2593753 .. 2593773 -  -9.7  -5.10461   GTGACCCAATAAAAA            TGGGGGC TGTAATC GCCCCCA            CAGGTTATGACACTA  93 48
CH53_RS11355 2586415 .. 2586436 - -14.5  -4.99435   GGCAAGAAGTAAAAA           GCCCGGTAA ATGA TTACCGGGC            TTGAGTCGAACCTAT 100 63
CH53_RS11350 2585382 .. 2585402 -  -2.6  -4.19624   GACCGGGAAGAGAAA            GAATAGAA TCAGT TTCTCTTC            CCGTTGCCTGCCACT  57 54
CH53_RS11345 2584499 .. 2584511 -  -3.4  -3.05844   TGCCTTACTGCAATA                CCAA TTACT TTGG                GTATGTTCGTTAGTT  45 172
CH53_RS11340 NONE
CH53_RS11335 2583258 .. 2583280 - -11.3  -2.73364   AAAAATAGCAGATGA           CTACGGGGA GATAG CCCCCGTAG           CGAAAATTAGCCTAC  79 32
CH53_RS11330 2582647 .. 2582661 -  -5.8   -3.1085   CTAACGTAGCGAATA               TTTAAC AAA GTTAAA               AGGTGAATAAATCTT  54 87
CH53_RS11325 NONE
CH53_RS11320 NONE
CH53_RS11315 2581531 .. 2581547 -  -5.2  -2.94823   AATGCCGAAAAACAG              TCTGTT TAGGC AACAGA              AGGGGGGAGGGCGGC  51 92
CH53_RS11310 2580781 .. 2580802 - -13.1  -3.16742   GTTAATCGGGATTAA           TGAGCCTCA TCCT TGAGGCTCA            CCCTACGGGCTAGCA  91 138
CH53_RS11305 2579314 .. 2579329 -  -2.6  -3.86015   CAGTTGCTGGATAAA              CAG-CAA CGT TTGACTG              TTAGCACTATCGAAG  54 391
CH53_RS11295 2577550 .. 2577576 -    -8  -3.60296   TAGCCCGATGTTAAA         CACCATGCCA TTGATTC TGGCACGGCG         TTCGGTGGCGGGTTC  66 286
CH53_RS11285 2575349 .. 2575364 - -11.8  -4.40358   ACTCATTCCACAAAA              CCCCGC TTCG GCGGGG               TTTTTGTTTTGTGTG  95 69
CH53_RS11260 2568175 .. 2568185 -  -5.4  -3.56568   CAAGCAGCGTTCAAA                 TCTG TTC CAGA                 CAGATTTGTCACCCG  58 48
CH53_RS11255 2567510 .. 2567522 -  -6.3  -4.07885   GAGCGCCGTTCAAAA                TGGTT TAC AACCA                ATTTGTCGTTCTCTT  69 101
CH53_RS11250 NONE
CH53_RS11245 2566167 .. 2566190 - -12.4  -4.93365   TTGGATAACTAAAAA          TGGGCCTGGA TTTC TCCCGGCCCA           TAATAGAATTTCTCT 100 55
        gltB NONE
CH53_RS11215 2554231 .. 2554248 - -12.7  -5.04265   AAAAAACAGTAAAAA             GGGCTGG ATAA CCAGCCC              TTTAGCGTTACGTTT 100 61
CH53_RS11210 2553477 .. 2553494 - -14.1  -3.20858   TACCATACCCATTAA             GGGCGGC ATTA GCCGCCC              TTATTATTTCTGCCA  95 53
CH53_RS11180 2548925 .. 2548969 -  -6.4  -2.82005   TATAGAAGTGTAAAT GTGCTGACTACGGCAGTATG AGGAA CACCCCACCGTAGTCAGTAT GATAGCTAAGCGCGT  55 43
CH53_RS11175 NONE
CH53_RS11170 2546057 .. 2546082 - -12.7  -3.61001   CGCCAGAAAAACAGA         TGCCAGC-CGAT GAT ATCGTGCTGGCA         TTTTTTATGGCTAAA  90 105
CH53_RS11130 NONE
CH53_RS11125 2538571 .. 2538584 -  -5.3  -2.73364   CTTTCACCCGAATCA               CTTAC TAGT GTAAG                CTCATCGGGATGCAC  49 139
CH53_RS11120 NONE
CH53_RS11115 NONE
CH53_RS11110 NONE
CH53_RS11105 2535801 .. 2535817 -  -5.1  -2.52543   ATTTTCCTTAATGGA              TGACGAA ATC CCCGTCA              TCTTTCAAATTGCAG  48 93
CH53_RS11100 NONE
CH53_RS11095 2533950 .. 2533962 -  -4.8  -2.80071   AAATGCTATTCAAAT                CGGT GTCTA ACCG                GTTTGTCATCCGCTT  50 92
CH53_RS11090 NONE
CH53_RS11085 NONE
CH53_RS11080 2531600 .. 2531616 -  -6.7  -3.64822   ATTCTTTGATTTAAA              TTGAATT TAA AATTCAA              ATTTTCACAAAAATA  66 415
CH53_RS11075 NONE
CH53_RS11070 2528733 .. 2528749 - -13.7   -6.0427   AGTAGACAAAAAAAA              GCCCCTC AAT GAGGGGC              CTTACGAGATCGGTT 100 331
CH53_RS11065 NONE
CH53_RS11060 2527005 .. 2527029 -  -2.9   -2.5919   GATTACAGCAACCCA         CGCGA-ATCA AGTTTG CGATGTCGCG          TTGCAGCGAATATTG  41 106
CH53_RS11055 2526498 .. 2526517 - -13.6  -5.73339   ATAAGCATAAAAAAA            CGGCTGGT AATA ACCAGCCG             TAGACGCAATAACAT 100 46
CH53_RS11050 NONE
CH53_RS11030 2518291 .. 2518315 - -12.9  -2.75294   AAGAAACATTATAAC          GAGTGTTTCGC GTG GCGCAACACTC          ACGCCGTTAATAATC  90 44
CH53_RS11025 NONE
CH53_RS11020 2517619 .. 2517640 -  -8.7   -4.4767   CGATGGATCAGAAAA           GGCCATCCA TGAG TGGACAGCC            TTTAGAAAAATAGGG  85 55
CH53_RS10970 2508617 .. 2508635 -    -6  -2.67055   ATAATATGGAGACCA             TTGCCG AGAACTA CGGCAA             AGTGTTGAAGGCTGA  51 393
CH53_RS10955 2505978 .. 2505990 -  -3.3  -2.60211   ATTTTGCCAAAAATT                TGCGC TGA GCGAA                GATTTTGGTGCCAAT  42 253
CH53_RS10920 2499157 .. 2499171 -  -5.7  -4.39571   TCGAGAAAGGTAAAA               TCACC CGTGC GGTGA               AAGGTGCCACCCTGA  72 265
CH53_RS10870 2484753 .. 2484777 -   -10  -2.65112   AATGGAGTGATAGGA          CCGGGTGG CCGTAATAT CCACCCGG          TGACTTTTGCAAAAA  72 47
CH53_RS10865 NONE
CH53_RS10860 2482989 .. 2483002 -  -8.1  -3.14211   AGTTCCGGCCACTAA               CGGCA CCAT TGCCG                AAATTTTTTATAGCG  65 8
CH53_RS10855 NONE
CH53_RS10850 2481656 .. 2481666 -  -3.2  -3.17212   TTACGATTTTATCAA                 GCAT GGA ACGC                 CTCGTTACTCGATGA  46 30
CH53_RS10845 2480255 .. 2480273 -  -8.1  -5.79595   TTTCAAAAGAAAAAA             GACCGGT GATTA ACCGGCC             TTGATATAAAAGACT 100 62
CH53_RS10840 NONE
        panF 2477990 .. 2478004 -  -2.9  -3.43564   GAATCCAAGGCATAA               CTTTT CTCTC AAAAG               CTCAATCCCCTTCAT  46 184
        prmA 2476759 .. 2476773 -  -6.4  -3.83026   TGCGCTCAGATGAAA               GGCCAA ACT TTGACC               AATTGATGAAAAAAG  66 358
CH53_RS10825 NONE
         fis 2475352 .. 2475375 - -10.2   -5.4505   GGGCGTAATAAAAAA          GGCGCGCTCC GTGT GGAGTACGCC           TTTTTAAACAACAAG 100 55
CH53_RS10815 2474594 .. 2474615 - -11.5  -4.30014   GTTAGCAAGCTAAAA           GCCGGAGGC AAAA ACCCCCGGC            GGGTGAATTTAGCGA  93 34
CH53_RS10810 2474011 .. 2474025 -  -4.2  -2.71144   TACTCCCCCTAATCA               CGCTGT ATT ACAGAG               CGACTACGTTTACCG  45 18
CH53_RS10805 2473432 .. 2473447 -  -7.5   -5.7946   TTGGCAACAAAAAAA              CCCGC ACAAAG GCGGG               TTCTTTTTATTCAGA 100 117
CH53_RS10800 2471507 .. 2471532 -  -6.1    -5.626   TAGCCGATAAAAAAA         CACCGCGTCAGT GTC ATCG-CGCGGTG         TTTTTTATTCTTAAT  95 52
CH53_RS10765 2462938 .. 2462959 - -15.9  -4.20783   ATTTTAGCTAATAAA           CAACCCGGC ATAG GCCGGGTTG            TTATGACAGAAGCTG 100 68
CH53_RS10755 2459880 .. 2459902 - -14.9  -3.17146   GGTCTGGATAATACA           TCCGGCAGG GCAGG CCTGCCGGA           GAGGTAATCAGTAAT 100 40
CH53_RS10750 NONE
CH53_RS10745 NONE
CH53_RS10740 2456728 .. 2456747 - -13.6  -5.55698   GATAAGGCAAAAAAA            GGGTGAGG ACAC CCTCACCC             ACAAGTACACAATGT 100 63
CH53_RS10725 2454157 .. 2454196 -  -2.1  -4.54047   TGATGGCAGATAAAA GT-GCCAGCCGTGAAGAAG TGCG CTTCGCC-CGGGCGGCGAC  AGCCGAGGTGGCAAT  63 398
CH53_RS10705 NONE
CH53_RS10700 2448090 .. 2448107 -  -8.3  -4.73614   GATTAGGAAAATAAA             GCCCTGC CTTG GCGGGGC              TTTTTGTTGCTGATA  88 266
CH53_RS10690 2443927 .. 2443941 -  -7.8  -4.57569   CTATTTCGGTAAAAA               CCAGCC CTG AGCTGG               CGGAGAGTCTGCGCG  81 349
CH53_RS10665 2438235 .. 2438254 - -10.7  -3.91488   AAGCGTTGTAAAGAA            GGGCTCC CTAATC GGAGCCC             TTTGTTTTTTCAACA  86 67
CH53_RS10650 2435443 .. 2435457 -  -6.4  -4.15061   TAATCGAGATACAAA               TCGGTC GGG AACCGA               TTTATACAGCATTTA  71 228
CH53_RS10630 2430631 .. 2430653 -  -9.9  -5.54264   AAACAGTCAAAAAAA           TGGCCAGAT GATGA ATCCGGCCA           TTTTTGTTTAGCGCA 100 49
        malE 2423311 .. 2423327 -  -2.2  -3.26649   ATAGTGTTACAGCAA              GTGGTG TTGGG CACGAC              GAATCGTGCCCCTTT  43 55
        malF NONE
        malG 2420584 .. 2420602 - -13.1  -3.52519   ATGACCTATAAAAAT             GGCGGCC ATTAA GGCCGCC             CTAAAGACACAGTAC  95 208
CH53_RS10575 2416504 .. 2416521 - -10.5  -4.87592   TCAGATATAAGAAAA             CCGGACG AGAT CGCCCGG              TTGGTGTTATCAGCT  93 105
CH53_RS10570 2415504 .. 2415522 - -10.3  -4.33907   CAGAAACATTGAAAA             TGCCCGA GAGGT TCGGGCA             TTTATACTCTTTGGT  90 42
CH53_RS10565 NONE
CH53_RS10560 2408536 .. 2408560 - -10.8  -4.27062   TTAAGTAAAATGAAA          GGAGATAGCC GTGAT GACTATCTCC          TTTTTTAATGCTCTT  90 62
CH53_RS10550 NONE
CH53_RS10545 NONE
CH53_RS10540 2400116 .. 2400133 -  -8.5  -2.74274   TAATTAACAAGGAAG             TGTGCAA TTTC TTGCACA              GGGGTGCACATTTTG  65 154
CH53_RS10535 NONE
CH53_RS10530 NONE
CH53_RS10525 NONE
CH53_RS10520 NONE
        purH 2381327 .. 2381337 -    -4  -2.92061   CAATAATCAAAATAT                 TCAT CAG ATGA                 CTCCGTTAAGCGGGT  46 44
CH53_RS10455 2380002 .. 2380026 -   -10  -3.95725   AAGGCCTAATAAGAA         GCAGGGCACAG CAAG CTGCGCCC-GC          AGAATACAATGGTAG  84 43
CH53_RS10420 2374757 .. 2374769 -  -6.3  -3.64703   CTGTCCGCATCCAAA                TTGTC TGC GACAA                TTACGCTTACTATTA  64 51
CH53_RS10415 NONE
CH53_RS10410 NONE
CH53_RS10405 NONE
CH53_RS10400 NONE
CH53_RS10395 NONE
        thiH 2368585 .. 2368602 -  -8.3   -4.7629   TCACCAACGTAAAAA             CCGCTCC TTAC GGGGCGG              TTTTTTTTTGCTTTT  88 63
CH53_RS10320 2353019 .. 2353043 - -11.5  -4.39329   ACTCCAGATAAGAAA          CAAGCTGCATA TTA TAGGCAGCTTG          CTTTTTGGCGTAGAC  93 146
CH53_RS10315 2351978 .. 2351997 -   -10  -3.28973   TAATTTAATAATAGA            TGGGAGGC CAAA ACCTCCCA             CTTTAGCTATTTTCT  77 32
        fadB NONE
        fadA 2336152 .. 2336170 -  -9.5   -6.0427   ACTAGATAAAAAAAA             CCCGCCC CTGAC AGGCGGG             AAAACGGCAACTAAA 100 111
        rfaH 2333086 .. 2333108 -  -7.7  -3.28924   GATGGTTGTTGATAA           GGTAGGTAC CGAGC GTGCCTACC           TTGGCAGATATATTA  66 38
CH53_RS10170 2318242 .. 2318270 -  -5.1  -4.07687   ATTGTGGTTTGAAAA        CGCGTGGCTGGCC AGA AACCCGCCAGGCA        TTGGCAAACATGGTA  64 134
CH53_RS10160 2314790 .. 2314811 -  -3.6  -3.33589   AACCCACAAAAACTA           CCCACGAC GCAATT GCAGTGGG            GCGTATTGGTGTGGT  48 200
CH53_RS10120 2306748 .. 2306782 -  -7.1  -2.90496   TTTTGGTTCAAAGGA     GCATGCAGCCAGGAG TTTAC CCCCTGACTGTATGT     GTTAATAATAAGGAA  60 60
CH53_RS10115 2304320 .. 2304338 -  -2.4   -3.3514   AGGTATATTTCATAA             CAATTCCT GTC AGGTATTA             ATCCAAGTGACAAAG  45 23
CH53_RS10110 NONE
CH53_RS10105 NONE
CH53_RS10100 2302418 .. 2302434 -  -5.9  -2.50492   TATTATTAGCAACAT              TATTCCC ATA AGGAATA              GTCTGTATTTAATAT  50 79
CH53_RS10095 2301269 .. 2301284 - -11.8  -3.18383   ATTTTTATTTATGAA              GGCCCG TTGC CGGGCC               TTAGTTATTAGCTAA  83 77
CH53_RS10065 2295292 .. 2295318 -  -9.5  -3.36452   ATGGCGTAACATGAA         GGGCGATATTA TTTAT TAATGTCGCCC         TTTTGCTTGTTCGGT  75 127
        rsmD NONE
CH53_RS10035 2289300 .. 2289312 -  -9.1  -5.76949   TATTGGCAAAAAAAA                CGGCA AGA TGCCG                AGAACGATCAGGCAC 100 415
CH53_RS10020 2287895 .. 2287909 -  -3.5  -3.79251   CAGGGTATGACTAAA               GTGAG CGTAT CCCAC               GCTTGTGATGCGTGC  54 89
        zntA 2285382 .. 2285416 - -12.1   -5.0133   TATTTGGTCAAAAAA     GGGGCAAAAGCGGAG TAACC CCCCGCCTCTGCCAC     GATCCTCAGAACGGA 100 49
CH53_RS10005 2284149 .. 2284167 -  -3.1  -2.53876   TGTTACTTGAACTTA             CAGGG GGTTAGTTA CCCTG             CAAAGCCAACTAATC  42 84
CH53_RS10000 2283193 .. 2283206 -  -6.7  -3.90744   GTTCTCGGCAAATAA               TACGC CGTT GCGTA                TTGCCTATCACACAC  66 397
        glpT 2277508 .. 2277545 - -10.7   -4.7373   TCAGGGTATGAAAAA   GGCTATGTCGCTATAAA TCCA TCAATAACGACACAGCC    TGAAAAGCGTAACTA  93 49
        glpQ 2276306 .. 2276332 -  -7.2  -4.83269   ACAGCACATGAAAAA         GTGGCGCATTAA ACA TCGTTGCGCCAC         GGGTTTATTCCGTTA  83 56
        rhtB 2273580 .. 2273612 -  -6.2  -3.34013   TATCGCGCTAATTAA      TGCCCCAACCGGGA GATGA TGCCGGTTGGGTAA      CCATTTGTTTAAATC  60 45
CH53_RS09940 NONE
CH53_RS09935 2268193 .. 2268206 -  -3.8  -3.01712   TTCTTGCCGCCAACA               CTGG TGGCAT CCAG                CTACGGGATGAACTT  47 285
CH53_RS09925 2266395 .. 2266416 -  -5.8  -4.24948   GCAGGATACGCAAAA           CCGAAGTC GATGTT GGCTTCGG            TTTTTTTTTGCTTTT  67 51
CH53_RS09910 2263002 .. 2263015 -  -3.7  -3.62522   GAATGTGTCGAAGAA               GTGCG GCTA CGCGC                CACGGTCTCCCGCCC  53 278
        cyaY 2256846 .. 2256857 -  -2.2     -3.94   TGAACGCTCAAATAA                GGTC GGTT AACC                 GAAGCTCACCTCTTC  51 20
        hemC NONE
        hemD NONE
CH53_RS09855 NONE
CH53_RS09850 2249501 .. 2249515 -  -9.2  -5.68023   TCAGAAGCAAAAAAA               GGCCCC GTA GGAGCC               TTTAGATGACTAATG 100 146
CH53_RS09750 NONE
CH53_RS09745 NONE
CH53_RS09740 2225457 .. 2225491 - -11.5  -4.27316   TCGCGCAAGCGAAAA     CAGTAACGGGCAG TGTATTGGT CTGCCCGTTTCTG     ACCCGCTAAGGCGTT  93 31
CH53_RS09730 2222874 .. 2222896 - -10.5  -2.55238   ATGAAAAGAAATTAT           TGCGCCGCC GTGCA GGTGGCGCA           TGACTAAATTAGTTA  72 34
CH53_RS09725 2221640 .. 2221658 - -13.2  -3.15861   GATCATCGGGATTAA             TGAGCCTC ATT GAGGCTCA             CCCTGCGGGCTGGCA  91 139
CH53_RS09720 2220796 .. 2220807 -  -2.2  -3.44848   GGCTGCGACTAAATA                CGAT AACT ACCG                 GTATCTTGCCCGCCG  47 7
CH53_RS09715 NONE
CH53_RS09710 NONE
CH53_RS09705 2215942 .. 2215974 - -10.8  -2.94412   GGTAACCCGAAACCA      GAATATAAACTGTC TTTGC GGCAGTTTATATTC      ATTAAGGTTTTTATT  78 36
CH53_RS09690 2212302 .. 2212316 -  -2.8  -4.07687   ATGCTGCTGGTAAAA               TCACTT ATA ACGTGA               TTGATACCTATCCCA  56 215
CH53_RS09655 2202639 .. 2202658 -  -3.5  -3.48024   TTTCACCATTAAAGA            GGCGC AATTACTAGA GCGCC             ATGGTTACGCCTTTA  50 424
CH53_RS09645 2201208 .. 2201223 -    -4  -2.78495   GACGATTAAAATTTA              TATGCT ATCG AGCACA               TTAGCTGCGCTATCG  45 348
CH53_RS09575 2186030 .. 2186062 - -15.7  -4.18401   CGACATATTTTAAAA      CGCAAAAGGGCAACA TCA CGTTGCCCTTTTGCT      TATCTATTGCCTGTC 100 39
CH53_RS09560 2183138 .. 2183155 -  -8.4  -2.92475   TGGAGTGCTACAAAC             CGGTGC CTAAAC GCACCG              TCGCGTTGGTGTACC  63 139
CH53_RS09550 2181219 .. 2181236 - -11.3  -5.80817   CCTAACAGAAAAAAA             GGTAGGC CGAA GCCTACC              AAGTATACCCTTCGT 100 264
CH53_RS09545 2179698 .. 2179716 - -13.1  -5.57396   ATAAGGAATAAAAAA             GCCGGGC ATAAA GCCCGGC             ATGGGAAAACAGAGA 100 57
CH53_RS09540 NONE
CH53_RS09535 2178723 .. 2178735 -  -6.9  -4.85599   CTCAGCTTATAAAAA                GCAGC GGG GCCGC                TATTTTAGATCATGA  83 243
CH53_RS09480 2163869 .. 2163887 - -13.2  -3.15544   GCTCATCGGGATTAA             TGAGCCTC AAA GAGGCTCA             CCCTGCGGGCTAGCA  91 328
CH53_RS09475 2161053 .. 2161066 -  -9.5  -3.57561   CCGTAAGTTGTTAAA               GGGGC GCAG GCCCC                TTTTCATCATAATCA  77 91
CH53_RS09455 2155483 .. 2155498 - -10.4   -4.8048   CCGTCAGATGAAAAA              GGCACC TTCG GGTGCC               TTTTTCATTTCTACA  93 84
CH53_RS09445 2152514 .. 2152524 -  -3.2   -4.9138   ATTACCTAAATAAAA                 GGAT ATT ACCC                 AAAGTCATCGGCGTT  70 134
CH53_RS09440 NONE
CH53_RS09435 2150264 .. 2150299 -  -3.9  -2.77182   TTGCAGACTGAATGA    GTCCCCGTACTGCCT GTCAAA AAACAGCACGGGGTA     TATTGAGATTATAAA  46 61
CH53_RS09430 NONE
        hslU 2148284 .. 2148315 - -10.2  -5.42198   TGTCAAAAAATAAAA      CAAC-AGTGGGAGGC GAT GCCTCCCACTCGATA      TTGTCCTGGCGGACC 100 71
CH53_RS09420 NONE
CH53_RS09415 2146612 .. 2146631 - -12.2  -4.81083   GCTAAGTAGTAAAAA            GGGCGATA TCAG TATCGCCC             TTTTTTGCGAGGATC 100 50
CH53_RS09405 NONE
        glpK 2143215 .. 2143238 - -15.4  -5.18726   TTTTCACAATAAAAA          GGCACCATCA GGGA TGATGGTGCC           TATGATTTACAAACA 100 63
CH53_RS09395 2141866 .. 2141891 -  -8.3  -4.84359   TGAGGTTGATAAAAA         CGGGTACCG GTTTAATG CGATACCCG          TTTTATGCTCTGATA  90 72
CH53_RS09385 2139565 .. 2139599 - -11.6  -3.64822   ACCTTGCTATCTAAA     GTGAACCAAGGG AAATATGCCAA CCCTTGGTTCAC     TGTTTATTACCAATA  88 32
CH53_RS09375 2138256 .. 2138270 -  -7.8  -3.03309   GGTCAATAATAATGA               CTGCCC GAT AGGCAG               TTTACCTGTCCAACA  63 96
CH53_RS09370 2137386 .. 2137409 -    -6  -6.11229   ACCAAAACAAAAAAA          CCGGGGCTG TTTACGT CA-CCCCGG          TTTTTTATTACGTTC 100 61
CH53_RS09345 NONE
CH53_RS09340 2131903 .. 2131915 -  -3.3   -4.4078   TGTCTTGAACCAAAA                GCACC AGC AGCGC                ATTGAGAAAATGCAG  63 515
CH53_RS09330 NONE
        cpxA 2128981 .. 2128992 -  -2.2  -3.29263   ATATCGCCGCCAGAA                TAGG TTCG CCCA                 ACGCGGTGCGTGCGG  45 247
CH53_RS09315 2127375 .. 2127389 -  -4.3  -2.57132   CTGCCTGGCTACAAT               TCCAA TTACT TTGGA               TATACACCTTTCTAT  47 73
CH53_RS09285 NONE
CH53_RS09280 NONE
CH53_RS09275 2119501 .. 2119514 -  -5.3  -2.86071   CCTTACATGAATAAG               CTCAT CGGG ATGAG                TTTGCTGGCCGCCTA  50 131
        rfaD 2115895 .. 2115911 -  -3.7  -3.15249   CATACCGTTTATCAA              TTCCTTG CAG CAAGTAA              TTTAGACTGAGCGAT  48 27
CH53_RS09255 NONE
CH53_RS09250 2113750 .. 2113781 - -13.2  -3.46511   TCAGATAACCCACAA      CAATCAACTCTGAT AATT ACCAGAGTCGATTG       TTATTACATGATAAA  95 97
CH53_RS09245 NONE
CH53_RS09240 NONE
CH53_RS09235 2110212 .. 2110233 -    -3  -3.86015   TACCTGTTTGATAAA           TCACGG AATAAACGCA CCGTGA            TTAAACAGTGGCTGA  54 482
CH53_RS09210 NONE
CH53_RS09205 2106414 .. 2106424 -  -3.2  -3.76582   CGTAATAACAAAAAC                 CCAA ATA TCGG                 CCGCACTGGGTACCA  52 94
        slmA 2105729 .. 2105742 -  -9.5  -4.77157   TTAAGCCAGCAAAAA               GGGCC AAAT GGCCC                TTTTATCGTTTTTTG  93 58
CH53_RS09185 2103187 .. 2103203 - -12.3  -4.63044   ACTGAGATAAAGAAA              GCCCGTA AGT TACGGGC              TTTAAAGGAATTTTG 100 66
CH53_RS09180 NONE
CH53_RS09175 2100873 .. 2100883 -    -4  -3.14564   TTAGTTTTCCATCAA                 GAAT GGA ATTC                 CATTAATTACTCATT  48 266
CH53_RS09165 NONE
CH53_RS09160 NONE
CH53_RS09155 NONE
CH53_RS09150 NONE
CH53_RS09145 2096221 .. 2096262 -  -4.5  -5.54907   CCGACAAAAGAAAAA GGTGTAAC-AGGCTTTTCTC AAT GAAATCAGCGTTGTTACACC TGTTACCCTTGTTAC  89 69
CH53_RS09135 2094625 .. 2094644 -  -6.3  -5.71712   TTGCAGACAAAAAAA            GCCCCGC ACGAGG GCGGGGA             AAGGTTGCCATGATC 100 289
CH53_RS09130 NONE
CH53_RS09125 2092938 .. 2092964 - -10.8  -2.87132   TGCCGCCTGCACACA         GGCAGACGATTC GAA GGAGCGTCTGCC         TGTGTGCAGGCGCCC  77 110
CH53_RS21860 2091757 .. 2091778 - -10.1  -4.83032   AGATTAAATAGAAAA           TAGCCCGTG ATCT CACGGGCTT            TAAAGACATTTTTTG  93 168
CH53_RS09115 NONE
CH53_RS09110 2090383 .. 2090393 -  -6.8  -3.06515   TTTGAGCGTTAAAAT                 TCCC GTA GGGA                 TTATGCATTAGCTTT  59 132
CH53_RS09105 2090066 .. 2090105 -  -6.8  -3.36581   CAAAGTGGTAAGCAA  TTAGAGTATT-TCATTC TCAGATG GAATGATAATACCCTAA  TCATAGTTATGATTT  62 32
CH53_RS09100 2087600 .. 2087614 -  -5.8  -3.61178   TCTATTGAGCCGAAA               GATATA GCC TATATC               GAACGGTTGGTTACA  59 93
CH53_RS09090 2085286 .. 2085296 -  -6.8  -4.71223   TTACAAGAGATAAAA                 GGCT GAT AGCC                 CTATTGTTGGTTTAG  81 58
CH53_RS09080 2083690 .. 2083701 -  -2.2  -3.84406   CGGCTACTACAACAA                CGCA GTAT TGCA                 GAGTGGGGCTTAATA  52 179
CH53_RS09070 2081096 .. 2081111 -  -3.3  -2.78816   TGACGGGGCATGATA              CTGAA ACTCGG TTCAG               TCTGCCAATAATTTG  44 22
        rpoZ NONE
CH53_RS09060 NONE
CH53_RS09055 NONE
CH53_RS09050 2075882 .. 2075894 -  -6.3  -2.50816   CCCTTATTTATTAAG                CGTTA GTG TAACG                TGTTCGCTCTGGTAA  54 8
CH53_RS09040 2072950 .. 2072975 -  -6.2  -5.60993   CCGTTGATAAAAAAA        TGGCCGGGATCG TTTA CGA-C-CGGCCA         TTTCATTGACGTGTT  95 51
CH53_RS09035 2070683 .. 2070702 -  -5.1  -3.89822   TATTTATGTGATAAA            TATCCAT TAATCG ATGGATA             TGGTGTGTCTCAAGG  61 467
        glnA 2057412 .. 2057429 - -11.3  -5.28826   AAAGTGGAGAAAAAA             GCCCATC CGGA GATGGGC              CAAAAGTTTCCACGG 100 177
        glnL NONE
        glnG 2054724 .. 2054753 -  -2.7  -3.66999   ATCTATTTACGGAAA       CAGGCGCGTAAGC AGCA GTTTTCACGCGTG        ATCTGATGATGTCCC  50 102
CH53_RS08950 2051307 .. 2051327 -  -3.3  -5.60689   CTATACAACAAAAAA            TTCTTTTGC CCT GCGAAAAAA            TGATGTAGAGTTACA  83 323
        mobA NONE
CH53_RS08920 2044493 .. 2044512 - -13.6  -4.09554   ATGAATAAAACAGAA            GGCTACCC TGAT GGGTAGCC             TTTTTGTATTTATAG 100 35
CH53_RS08895 NONE
CH53_RS08890 2036207 .. 2036246 -  -7.2  -3.68569   TCATCGATTGAATAA  CCCGGAAGCG-GAACCACA AGT TCTGATTCTCACTCCCGAG  CTAATCGAGCGTGGA  67 55
CH53_RS08850 NONE
CH53_RS08845 2024817 .. 2024827 -  -6.8  -4.17701   GTGATAAATCAGAAA                 CGGT TCT ACCG                 TTACTCTTCCCCAAA  71 232
CH53_RS08830 NONE
CH53_RS08825 2021757 .. 2021776 -  -5.1  -4.32402   CCTTAATTAAAAGAA            GATCTTT TTATTT AAAGATC             TCTTTATTAGATCTC  68 275
CH53_RS08820 2019707 .. 2019750 -  -7.5  -4.03167   CCAGAAGGCAAAGAA GAACTTACCTGCACCGC TTATCCCTTC GCAGCGCAGGCAAATCC CGTTGTTAGGCACTA  73 31
        gidB 2018965 .. 2018975 -    -4  -3.86015   CATTTTTTTGATAAA                 TAAC AAA GTTA                 GTTTGACTTAAGAAT  57 23
CH53_RS08810 NONE
CH53_RS08805 NONE
CH53_RS08800 NONE
CH53_RS08795 NONE
CH53_RS08790 NONE
CH53_RS08785 2013972 .. 2014002 - -12.7  -2.82516   CTCCTCATTACCAGA      CGG-CCTGCTTTCC TAAT GAAAAGCAGGGCCG       CATAGCGTTACCAGG  83 33
CH53_RS08780 2013091 .. 2013109 -  -4.5  -2.73338   ATAACCTGGTTAAAC            CG-CGGAG GCTC CCCCGACG             ATCTCGGTGAGTTCC  47 1
CH53_RS08775 NONE
        atpC 2010931 .. 2010955 - -13.7  -5.88471   TACCAGTAAAAAAAA          TGCCAATCAGT TTT ACTGACTGGCA          TTCTATTTTTCTTAC 100 169
        glmU 2008875 .. 2008889 -    -5  -3.06183   TTTATTCCTATGTAA               GATTCT TTA AGAACC               TTGTCGATGTCAGTG  51 338
CH53_RS08760 2006936 .. 2006965 -  -8.7  -5.93809   TGGCCATAAAAAAAA       TCCGG-TATGCTTT TAA ACAGCATAACCGGA       CTTTTCGAGTTAACG 100 86
CH53_RS08715 1990352 .. 1990364 -  -6.3  -4.08945   AGGAGCTGTTCAAAA                TGGTT TAC AACCA                ATTTGTTGCTCAATT  69 115
        pstC NONE
        pstA 1988268 .. 1988283 -  -4.6  -3.05384   CTCTCTTTTAGCCAA              TGCCGC CGTA GCCGCA               TTTTGAAATTTATTG  49 87
CH53_RS08700 NONE
CH53_RS08695 1986546 .. 1986562 -  -6.7  -4.10269   TAAACAAACATGAAA              CAATATA GAA TATATTG              TTCAAAAAAGGAGGG  71 97
CH53_RS08690 1985582 .. 1985615 -  -3.2  -5.45652   ATCGTGAACAAAAAA     CACGATTGAAGCC CTATAATTT GGCC-CAATCGCG     TTATTAGCATGTATT  79 63
CH53_RS08685 1984382 .. 1984406 - -10.7  -2.80779   ATTACAATGCAAGCA          GCCCCACATCG TGA CAATGCAGGGC          TTTAATGTTCTCACT  77 59
CH53_RS08680 NONE
CH53_RS08675 1982324 .. 1982338 -  -6.4  -4.59853   GCAACGCTGGAAAAA               CTCTAC CGC GCAGAG               GTTGCACGCCTGTTT  77 457
CH53_RS08665 1980459 .. 1980489 - -13.3  -3.58184   AGATTATAACGACAA      CGCCCCCACCCTCG GTGT CGAAAG-GGGGGCG       TTTTTATGATCGGCT  95 42
CH53_RS08640 1974693 .. 1974715 -  -6.3  -5.64274   TGAGTGATAAAAAAA           CCCCTTTCA GCGAA CAAAAGGGG           TTCAAATGAAGGGGA  95 143
CH53_RS08590 1966087 .. 1966103 -  -8.7  -3.08934   TGACACACGCCAATA              TGGCCTG TAG CAAGCCA              AAGTGACATGCGAAC  67 203
        dnaA NONE
CH53_RS08580 NONE
        recF NONE
        gyrB 1959775 .. 1959801 - -10.9  -5.85178   AATAGGCAAAAAAAA        GCCCAGAGGCAG CTTC CTGC-TCCGGGC         TTTTCTATCCGATCA 100 54
CH53_RS08565 1958512 .. 1958531 -  -2.1    -3.727   CGCACCATATTCAAA            CTCAGCT TATTGG AGCTGAT             GAGGGTTGCGGCAAG  50 328
CH53_RS08530 1951204 .. 1951216 -  -6.3  -2.53876   TTTTAGCGCAAGGCA                TCTCT TTT AGAGA                GAATGACCAACAGAT  52 204
CH53_RS08510 NONE
CH53_RS08505 NONE
CH53_RS08500 NONE
CH53_RS08495 1944903 .. 1944913 -  -2.6  -2.74488   TAATGATCCCAATGA                 TAAT CGG ATTA                 ATATACGCCGAAGCT  41 267
CH53_RS08490 1943555 .. 1943588 - -12.5  -2.57564   GTATGTGGTCAGAAG     CTCTGCATATCGCCA TTAT CAGCGGTATGCAGAG      TCAGGGTTTATCCCA  83 33
CH53_RS08485 1941904 .. 1941914 -  -6.8  -3.05596   TACTCCGGCACTGAA                 GCCA ATG TGGC                 GATGCTTAAAGATGA  55 288
CH53_RS08475 1940999 .. 1941015 -  -5.2  -3.67773   TATTGAAAAAATATA              TTAAGC TGATT GCTTAA              TTTCAATACGGCGCG  58 9
CH53_RS08470 1940338 .. 1940356 - -11.7  -4.63218   CTCTCGGTAACAAAA             CGCCGCT AACAA AGCGGCG             GCGTTAAGTAAGAAG  95 81
CH53_RS08465 1938391 .. 1938417 - -10.1   -3.9749   AGGCAGAAGAGTAAA        GCGTCCGCGCCA GGAA TGGCGCGG-CTC         GAGCCTCCAGGGATG  86 114
CH53_RS08440 1930922 .. 1930943 -  -5.1  -3.79113   ACCCTTTCACAACAA           CG-TGCCGAC AGC GTGGGCAGCG           CGCTTATCGTGCAAG  61 252
CH53_RS08410 NONE
        glyS 1921986 .. 1922024 -  -7.5  -2.72344   CTTTACCCTTAATTA  CTTGACGTTGCCAG-AGG TTTA CCTGCCTGCAACGCCAAA   TTCTTTGGATAAATA  59 70
CH53_RS08400 1921050 .. 1921069 - -11.4  -3.32844   CGCGGGATTGCACAA            GGGGCCAC GCTT ATGGCCCC             TTTGCCGGTTGGTTC  85 120
CH53_RS08395 1918064 .. 1918085 - -11.6  -3.28712   CCTTTTGCTGTAGAA           GGGCCGTT TCTCCC AACGGCCC            TATTCAGTTATTGCT  85 44
CH53_RS08390 1916738 .. 1916771 - -12.7  -4.25283   ATCGGGCTATGAAAA     GATAAATACCGCG-CA ATC TGACACGGTATTTATC     CCCGTCATACTTCAA 100 131
CH53_RS08385 1916093 .. 1916106 -  -3.8  -3.65046   GCTTGATGGCAATAA               CAGC ATTGTG GCTG                TTAGTTGACGAATGG  55 60
CH53_RS08375 1913803 .. 1913815 -  -4.8  -2.85351   GTTGGGGATAGGATA                GCAC TGATT GTGC                ATCAAGATAGAGAGT  50 44
CH53_RS08370 1913339 .. 1913366 -   -12  -4.97405   ATTTACAAAAACAAA        CCGGGTA-GCGGC CAT GCCACCCACCCGG        ATTTAGCGCTGCGAT 100 44
CH53_RS08335 NONE
CH53_RS08330 NONE
CH53_RS08325 NONE
CH53_RS08320 NONE
CH53_RS08315 1901925 .. 1901951 -    -8  -3.57615   GTAATAGGGTGGAAA         GAGCGCCATA ATAACGG CACGGCGCTC         TGTCTGAGTAATTAG  68 157
CH53_RS08310 NONE
CH53_RS08305 1898454 .. 1898482 - -17.5  -3.58343   CGGAGTAGTTTTAAA        GCGGGAGAGAAGC AGC GCTTTTCTCCCGC        TAAATATTTTTGTTA 100 156
CH53_RS08295 1895839 .. 1895881 -  -8.3  -3.89614   TTTAATCTGGAGAAA GCCG-CGCTGGCTGCCGG GTTCTCCT CCGGCCGTCAGCTTCGGC GCGCACAACAGCGTG  73 53
CH53_RS08280 1892170 .. 1892185 - -10.4  -4.30833   CAAAGTATTAATAAA              GGGGAG TCTC CTCCCC               TTAAATTGAAGCTAT  89 355
CH53_RS08275 NONE
CH53_RS08270 1888718 .. 1888736 -  -3.2  -3.10522   ATTTTATTTAACATA             GAATGA GTCATTG TCATTC             CTTTACCGGTACCGG  46 56
CH53_RS08265 1887697 .. 1887736 - -15.2  -4.21438   TATGTGAATAAATAA  CACTTCGAGGCTG-GGGAT AAT ATCCCTCAACCCCGAAGTA  ACGTATTAGTAATAG 100 31
        xylF 1883429 .. 1883459 -  -4.8  -4.04806   GGCTACATTAAATAA      CGGCCATGTTAAT AAATTA AATAAC-TGGCCG       TTTATTACAAAGTCC  63 58
CH53_RS08245 NONE
CH53_RS08240 1880632 .. 1880655 -  -9.7  -4.14257   CTCAATAAGCAGAAA          GATCAATGC AGTATG GCATTGATC           TCCCAGCGGAAAGAT  89 44
CH53_RS08235 1879338 .. 1879355 -  -6.9  -4.15881   AAACATGATAAATAA             TCCCCTC AAGT GGGGGGA              AGGTAAGAGATGTTA  73 59
CH53_RS08230 1877403 .. 1877420 -  -4.3  -4.11371   TAATAGTGTTTAAAA             TTAATTA GTTA TAATTAA              TCTCATTCTGCATTA  61 251
CH53_RS08225 NONE
CH53_RS08220 1873899 .. 1873925 - -15.9  -2.87564   GCAGGGGTTCAGAGA         GGGTGATCCCG TGAAT CGGGACCACCC         ATAGGTTGATGTAAT 100 113
        proY 1872389 .. 1872433 -  -6.4  -4.72846   CCACAGAGCTAAAAA GCAGCAGTATGGCCGCTGA ACCGATTA TCAGCGGCCAGTC-GTTGC TAAGCCTCGCGACTT  80 25
CH53_RS08205 1870047 .. 1870063 - -11.5  -4.77438   ACTTATTATGAAAAA              GCCCCCG ATT CGGAGGC              TTTAAGACAATCTTA  95 38
CH53_RS08200 1869404 .. 1869417 -  -3.9  -3.17688   GAATTATCTTAGCAA               TTCTT AGCC AAGAA                ATACGCGAACTACTG  48 156
CH53_RS08195 1867485 .. 1867496 -  -4.4     -2.55   CAACACGGTAAGTCA                TGGA AGAC TCCA                 GCCAGTAGGGATTAG  47 125
CH53_RS08190 NONE
CH53_RS08185 1865332 .. 1865346 -  -2.8  -2.82775   CGTACAGAAAATCGA               TGGG AAAAACA CCCA               CTGAAAACGAGAATA  42 45
CH53_RS08180 1863942 .. 1863955 -  -2.3  -2.76162   CACTTGAGCGTAAAT               CAGGC TTGC GCTTG                CTTTAACTCTGGCGA  41 11
CH53_RS08175 1863718 .. 1863737 - -12.2   -5.9663   AAACATGAAAAAAAA            CCCTGACT GAAA AGTCAGGG             TTCTTAAATTTGGTC 100 36
CH53_RS08165 1861319 .. 1861350 -  -7.3  -4.48713   GGTATCAATAAGAAA      CCGGCGAACATGC TTTTAC ACATACTCACCGG       TCTTATGCACGGTTA  81 44
CH53_RS08160 NONE
CH53_RS08155 NONE
        dppD NONE
        dppF 1856909 .. 1856924 - -10.4  -5.64274   TTAGTTATAAAAAAA              CGCCGA ATTA TCGGCG               TTGTTATAATTGATA 100 93
CH53_RS08125 NONE
CH53_RS08120 NONE
        bcsA NONE
CH53_RS08110 NONE
CH53_RS08105 NONE
CH53_RS08100 NONE
CH53_RS08095 1839840 .. 1839869 -  -6.6  -5.38054   GGCTACAAATAAAAA       TAAAATTCCTAC GCCGGT GTGGGAATTTTA        TTTTTATTTGTCGGT  93 345
CH53_RS08090 1838678 .. 1838693 - -10.4  -4.59773   TCTTATCGTCAAAAA              GGGCAG ATAT CTGCCC               TTTAAAATTTATATA  91 55
CH53_RS08085 1837899 .. 1837909 -  -2.6  -4.19648   TATAGATAAATTAAA                 TTAA TGC TTAA                 TGGGCTGACTCAGTT  57 15
CH53_RS08080 NONE
CH53_RS08075 1833780 .. 1833823 -  -8.8  -4.74518   AAGCACCAAAACAAA CGTTGCAACGGTACCGCT TTATCTTC AGCGGCACCGTTGCCTCC CATAAAGGCCATGTT  88 74
CH53_RS08070 NONE
CH53_RS08065 1830606 .. 1830629 - -11.7  -3.16564   CCGGCACTTTACCAA          CAGCGGCCC CAGCAC GGGCCACTG           TCGGGACTATTTACG  83 32
CH53_RS08060 1829815 .. 1829825 -  -6.8  -3.87062   AATTAAGAACTGAAA                 CGCT TCA AGCG                 GAAGTAACAACGAAA  69 234
CH53_RS08055 1828128 .. 1828146 -  -5.8  -3.07005   AATCAACGGTCAACA             CCACCGTG AAA CCCGGAGG             TGGAAGTGTACCATT  53 228
CH53_RS08050 1826119 .. 1826132 -  -6.7  -4.32857   CTGCCGAAAGATAAA               GTGGT TGAT ACCAC                GGCTGCCGGGGATTC  74 334
CH53_RS08035 1823695 .. 1823706 -  -3.6  -3.92005   ATAGATAAAGCTAAA                CCCG ACAT CAGG                 CGCGTATTTAATGAA  54 221
CH53_RS08030 1821096 .. 1821111 -    -6  -4.26622   AAACCACAGGTAAAA              GCGGCG CTGG CGGCGC               AAGAAGCAAACTTCC  69 455
CH53_RS08010 1817673 .. 1817698 -  -6.1   -4.3179   GTAAAAAAGCAGAAA         GGCTATGGACC GCAG GGTTGATAGCC          TTTTTTATTGTTTGA  74 51
CH53_RS07995 NONE
CH53_RS07990 1812190 .. 1812223 -  -8.8  -2.78793   AGGTAGAATAGATGA     TTCAGGTGGCTGCA ATAACG CGCAGCCGCCTGAT      TGAAGCCAATATATC  66 90
CH53_RS07970 1807340 .. 1807359 -  -9.2  -5.28942   CACGGTAAATAAAAA            GGCGGCCT GATT AGGTCGCC             TTTTTTAATTGTCTT  93 58
CH53_RS07960 1804086 .. 1804117 -  -7.3  -2.79915   ACTGACCCCATGATA      GCCTCTTGATCAG GTATAT CTGGTTAAGAGGC       TTTATCTCAACTATC  60 144
CH53_RS07950 1801812 .. 1801823 -  -4.4  -5.18995   AAGAGAATATAAAAA                GAGA GCCT TCTC                 CAGCACACTGCTCCT  80 81
CH53_RS07940 1799360 .. 1799399 -    -5  -3.56821   ACTACATTGGGGAAA  TTGCCATCCTCCCTGCTCA TTA TGAGCAGG-ATCACGGCTA  TCTGGTGCTGTAATT  56 23
CH53_RS07930 1796324 .. 1796334 -  -3.2    -3.024   TAACACATGAAATTA                 GTCC TAC GAAC                 ACCCGCAGACAGCCT  45 40
CH53_RS07925 1795321 .. 1795343 -  -4.8  -3.85698   TGTGCCTGGCACAAA           CATTGGCAGT TTC ACTGGCACTG           AATAACGCGAAAGAG  61 152
CH53_RS07910 NONE
CH53_RS07905 1788416 .. 1788434 -  -7.5  -3.62046   CTACCTCCCCAACAA             TTCACGT TTAAT ACGTGAA             AGAGGCCATCACCGA  68 86
CH53_RS07900 1787263 .. 1787293 -  -9.1  -2.71483   ATACCCGCCTAACCA      TCAGGGGATAGTGT ACCA AC-CTATCCCCTGC       CATAACTGAATATGA  67 41
CH53_RS07890 1785439 .. 1785462 -  -8.2  -4.93877   TTCTAGCAAAGAAAA          GGGTATGGCGC GAT GCAC-ATACCC          TTTTTTACATATACC  86 173
CH53_RS07885 1783929 .. 1783940 -    -3  -4.26903   CTGACTCCATTAAAA                TCAT TGCG ATGA                 TGTTGTTGGTTATCG  59 478
        idnK 1782135 .. 1782149 -  -7.1  -3.17194   AGTTGCGCAATCCAA               GAGGG GCGCG CCCTC               TTGGGTATAAAATCA  63 43
CH53_RS07865 1780142 .. 1780161 -   -10  -5.42131   TAATCATATAAAAAA            CCCTGACC ATAA GATCAGGG             CTTTATCGTTATTAC 100 54
CH53_RS07850 1776101 .. 1776121 -  -9.7  -3.72051   CGTAAGAACCTCAAA            CGTAGCCAC GAT GTGGTTACG            CTGAGCGATGAAATT  76 450
CH53_RS07840 1772136 .. 1772165 -    -2  -2.70932   GGTGCCGGGGAACCA       CGGGTAAGGCGGG TCATT CTC-CCTCTCCCG       CAACAAATCCCTCCC  40 9
CH53_RS07835 NONE
        glgC 1768773 .. 1768795 -  -4.1  -3.05596   TATTGTTGCAGCCAA           TTTGAACGC GGACA GCGCGCAAA           AACCGGAGCGTACAC  47 97
        glgA NONE
CH53_RS07820 1764718 .. 1764739 - -13.1  -5.40474   ATCTGTTTAAAAAAA           CCCTCTTCA CTGT TGAAGAGGG            TTTTTATTATTAACT 100 53
CH53_RS07790 NONE
        malQ 1752502 .. 1752528 - -14.5  -2.97771   GGCAGAAGAGTAAAG        CGT-CCGCGCCA GGGA TGGCGCGGCACG         AACCTACATGGGCGT  95 123
CH53_RS07770 1749709 .. 1749739 -  -5.3  -4.43309   CAACCTTAAGGAAAA      CGCTGTCCCCATGC TAGT GCGCGGGGAT-GCG       CCAATTTGAACCTTC  68 135
CH53_RS07765 1749280 .. 1749304 - -12.9  -3.98826   TCATTAAGTCAGAAA          TAGAGATGCCC GCC GGGCATCTCTG          TCTTATTATTACTTA 100 34
CH53_RS07740 1742504 .. 1742517 -  -5.3  -3.62597   GCGAGTTCCCAAGAA               CTTAC ATGC GTAAG                TGACCAGGGTGCCAA  58 132
        ompR NONE
        envZ 1740064 .. 1740090 -  -7.3  -4.08216   GGACGCCCGCGAAAA        GCGCGCTTGAGC AGGA GCT-AATCGCGC         TGGCTCGTCAGCCCG  71 256
        nudE 1732170 .. 1732196 - -11.6   -4.7033   CAAGGCAATATAAAA        GCCGGGAGCTC GTAACA GAGC-CCCGGC         TTTTTTATGTTTGAA  95 43
CH53_RS07685 NONE
CH53_RS07680 NONE
CH53_RS07675 NONE
CH53_RS07670 NONE
        hofQ 1725364 .. 1725392 -  -4.6  -3.51032   ATTCGTTAATGATAA       CCCGCCCCGCCAAT CAA ATCAGC--GGCGGG       ACCTAAACTGAAACC  54 308
        aroK 1724777 .. 1724788 -  -3.6  -2.52795   AACCTTCTTAACTTA                CGCC CGGA GGCA                 TTAGTAAAATGCTAA  42 43
        aroB 1723487 .. 1723499 -  -3.3  -3.61178   TTTACTGACTGCAAA                CAGGC TAT ACCCG                TCAGACTTCAGGCTG  50 187
CH53_RS07650 1722375 .. 1722386 -  -3.6  -3.34517   ACTCTGTTTCAAACA                GCAC ATCA GCGC                 ACAAATAAGAATGAT  48 41
CH53_RS07645 1721421 .. 1721437 -  -7.3  -4.36914   CTTTGTTCTATAAAA              CATCTGC CTG ACAGATG              GTGCATCTACGTCAG  78 94
CH53_RS07640 NONE
CH53_RS07635 NONE
CH53_RS07630 1718929 .. 1718967 - -14.1  -3.72695   AGGTGGGTTAGGAAA  CATTGATGATGAAGGGGG CAAA CCCCCTTCAT-ATCATTG   AGCCTTACGGATGAG 100 30
CH53_RS07605 1711909 .. 1711929 -  -3.1  -3.14132   GGGCTTCTTCACCAA            GCACCGCAG CCA CGGCCATGC            GACTGACTGATTTAT  46 83
CH53_RS07595 1709685 .. 1709696 -  -4.4   -4.1891   CTTGGGCAATACAAA                TCAC TCCG GTGA                 GTATTTATCCACACC  63 72
CH53_RS07590 1707521 .. 1707532 -  -5.8  -4.46073   TGGCAACAGAATAAA                CCTC ATTA GAGG                 CTCATCACCCCGCAT  70 112
CH53_RS07575 NONE
CH53_RS07570 1703947 .. 1703976 -  -7.8  -3.54935   CAAATTGGTTGTAAA       CCAGCCTTCGAG GTTGAG CGTGAAGGCTGG        TAACTCGCGATTAAG  68 36
CH53_RS07565 1701772 .. 1701784 -  -3.3  -4.26903   TGTATTGTACGAAAA                GGCCA AAC TGGCA                GGGCTAAACTTATCC  60 509
CH53_RS07550 1701027 .. 1701037 -  -2.6  -3.08813   TTTTATCTCAACATA                 TTAA TTT TTAA                 GAAAATTATCTAATA  43 15
        argD 1699523 .. 1699542 - -13.6  -2.93422   AGCAAGCATAACAAT            GGAGAGGC AACA GCCTCTCC             CTAATTGAGTTAACC  93 35
CH53_RS07530 1695849 .. 1695862 -  -5.3  -3.17392   TAGGCGGCAAGCGAA               CTCAT CCCG ATGAG                CTTACATAAGTAAGT  53 98
CH53_RS07510 1692804 .. 1692817 -  -5.3  -2.53905   TTATAAGCCATTAAG               TAACC CCAC GGTTA                ATGCCAAATCAATAA  48 23
CH53_RS07505 1691947 .. 1691971 -  -9.5  -4.55625   AGTAATATGACAAAA          GGAATAAAAAA ATA TTCTTTATTCC          TTTGAGGAATAATAA  91 71
        tauA NONE
        tauB NONE
CH53_RS07490 NONE
        tauD 1687902 .. 1687916 -  -3.4  -4.15044   TTTGTCTCGAATAAA               TCACCG CAA CGGCGT               TGGTCGTGGGAGAAG  60 403
CH53_RS07465 NONE
CH53_RS07460 NONE
CH53_RS07455 1681491 .. 1681518 -  -4.2  -2.77538   CTTGGAACAAAAATT        GGCACAGATT GTAGCTGA AATCTGCACC         GCTGTACCCACCAGC  46 64
CH53_RS07450 1680832 .. 1680849 - -12.7  -4.84527   CGCAGATAGCAAAAA             GCCAGCC GCAA GGCTGGC              TTTTGACTGACAGAG 100 48
CH53_RS07440 1679410 .. 1679433 -  -8.8  -6.06723   TGCCGCAAAAAAAAA          CCGCCACGAC AATG ATCGCAGCGG           TTATAAGCAGAACCG 100 56
CH53_RS07435 NONE
CH53_RS07430 NONE
CH53_RS07425 NONE
CH53_RS07420 1677400 .. 1677411 -  -2.2  -3.41738   GTGTCAAGAAATATA                CAGC ATTG ACTG                 CATTACCATGCCAGT  45 28
CH53_RS07415 NONE
CH53_RS07410 1676320 .. 1676348 -  -2.4  -2.79183   CGCATGGTTAGCATA       GCTACTGCGTGGT AATT ACCA-GCGGTAGT        GCGCGAACGCCTTGT  41 12
        fusA NONE
         tuf 1672821 .. 1672836 - -10.4  -5.72622   TTTATAAATAAAAAA              GGGTGC CGAA GCACCC               TTTATGACTTGATCA 100 66
CH53_RS07395 NONE
CH53_RS07390 1671909 .. 1671935 -  -2.4  -5.65513   TAGGAATGAAAAAAA        GAGTGAG--TCC AAGAA GGATTCTCACTC        TTTTTGACTGAATAA  80 76
        rpsJ 1671294 .. 1671308 -  -3.5  -2.72379   TCAATCGCTCAATGA               CCTGA TTAAC CCAGG               CTGATCTGCACGTCT  43 16
CH53_RS07380 NONE
        rplD NONE
        rplW 1669689 .. 1669700 -    -3  -3.12668   TAGGTTTACATTTAA                CAAT TGCC ATTG                 TTTTACTCCTCCGAC  44 41
CH53_RS07365 NONE
CH53_RS07360 NONE
CH53_RS07355 NONE
CH53_RS07350 NONE
CH53_RS07345 NONE
CH53_RS07340 NONE
CH53_RS07335 1666600 .. 1666626 - -11.7    -5.252   TATGGGTAGAAAAAA         TAAACGGCCCA CTTTC TGAGCCGTTTA         TTATGTTCGAGTTGG 100 49
CH53_RS07330 NONE
        rplX NONE
CH53_RS07320 NONE
        rpsN NONE
CH53_RS07310 1664494 .. 1664504 -  -3.2  -2.60075   TCCTCCCGAATTAAG                 CTAC GTA GCAG                 ATAATCTCGCCACCA  43 10
CH53_RS07305 NONE
CH53_RS07300 1663584 .. 1663594 -  -3.2  -3.32963   ACCTCTACCTTAGAA                 CTGA AGG CCAG                 CTTCACGGGCAGCAT  48 9
CH53_RS07295 NONE
        rpmD NONE
CH53_RS07285 NONE
        secY NONE
CH53_RS07275 1660890 .. 1660919 - -12.3  -4.61868   CAGTCACATACAAAA       GATTG-GCTGGCTA ATC TAGCCAGCTCAACC       CAACTTTGCAAGAAA 100 56
CH53_RS07270 NONE
CH53_RS07265 1660034 .. 1660050 -  -7.9  -4.42851   CCAACAAACCTAAAA              GCAGCGT TAT ACGCGGC              GCTTTTTCGGCGGAC  80 15
CH53_RS07260 1659386 .. 1659404 - -10.4  -3.14132   TCTCTTTGGTACTAA             GCTTTACT TGG AGTAAAGC             TCGACGATCAGGTGT  75 10
CH53_RS07255 NONE
        rplQ 1657900 .. 1657933 - -15.5   -3.0127   TCACTGAATTATAGA     TGTAAAAAAACCGGG CAAG CCCGGTTTTTTTACG      CGTTTACAGATTACT 100 36
CH53_RS07245 NONE
        zntR 1656923 .. 1656935 -    -2  -3.60814   AAATCCCACACATAA                TACA GCTAA TGTA                TACTGATTAAAACTA  47 54
CH53_RS07235 1656508 .. 1656526 -    -3  -4.81082   AATTAATGAATAAAA             TGCGCCGT GAA AAGGCGGA             AGAGCCAGCAGCGCC  68 175
CH53_RS07205 NONE
CH53_RS07200 NONE
CH53_RS07195 NONE
CH53_RS07190 NONE
CH53_RS07185 1647931 .. 1647960 -  -5.7  -3.30918   AGTCACAGCATAAGA       TGCAGGG-GGTCAA TCA TTGCCTTCCCTGCA       TTATGCAAGATCGTC  56 40
CH53_RS07175 1645157 .. 1645173 -  -3.7  -2.55668   GATGGGGACACGAAG              TTCCGAT TAA ACCGAAA              TCTAACCGTTTCGTA  44 136
CH53_RS07170 1645003 .. 1645040 -  -8.7  -3.45839   ATTGTTAAAGAGCAA   TATCTTAAACACGACTC GTTA AAGTCATCTTTAAGATA    TTCAGTTGATAATGT  72 60
CH53_RS07165 1641794 .. 1641804 -  -6.8  -4.78848   CTCTCAAACACAAAA                 CACC TTT GGTG                 TTGTAAGGTTAAGCC  81 10
CH53_RS07160 1641534 .. 1641567 - -16.9  -4.05033   TGTATGCCAGACAAA     CAAAAAAGGCCACCC GTTA GGGTAGCCTCTTTTG      CTTATTTGATGCCTG 100 36
CH53_RS07155 1640138 .. 1640151 -  -9.5  -4.37092   ATTTGGTGGATAAAA               GGCCC CTCG GGGCC                TTTTTTTATGGCTTC  90 31
CH53_RS07135 1633836 .. 1633866 - -20.6  -5.31519   AGACGCAAATAAAAA       CCCCCTTATCGGTA TCT CACCGATAAGGGGG       TCCACAGATATCAAC 100 66
CH53_RS07120 NONE
CH53_RS07115 NONE
CH53_RS07110 NONE
CH53_RS07105 NONE
CH53_RS07100 NONE
CH53_RS07095 1625701 .. 1625714 -  -5.3  -4.15788   AATCTGGTTAACAAA               GATTG CGGG CAATC                GTCGTCAATATATCT  65 4
CH53_RS07090 NONE
CH53_RS07085 NONE
CH53_RS07080 NONE
CH53_RS07075 1622782 .. 1622792 -  -6.8  -2.69598   ATCGGCAGAAAAATC                 GTCC ATT GGAC                 CTCCTTCGTTTTATT  56 36
CH53_RS07070 NONE
CH53_RS21845 NONE
CH53_RS07065 1621361 .. 1621380 -    -8  -3.32022   TCCCTTAGAGAGTAA            TTAACCTT ATAC AAGGTTAA             CAAATAACACTAAAG  66 60
CH53_RS07060 NONE
CH53_RS07055 NONE
CH53_RS07050 NONE
CH53_RS07045 NONE
CH53_RS07040 NONE
CH53_RS07035 NONE
CH53_RS07030 NONE
CH53_RS07025 NONE
CH53_RS07020 NONE
CH53_RS07015 NONE
CH53_RS07010 1612847 .. 1612867 -  -6.8  -3.42257   CCGTAAAGAGAGCAA            GCGCTGCA AAATA TCCAGCGC            GGGGTGGTTCAATTG  62 34
CH53_RS07005 NONE
CH53_RS07000 NONE
CH53_RS06995 NONE
        ssaR 1610348 .. 1610365 -  -4.9   -3.7732   TCGCCAGATGAACAA             CAATG-GC ATT GCTCATTG             ATGCAGCCCTCGCTG  58 46
CH53_RS06985 1610084 .. 1610100 -  -2.2  -3.11609   AAGCCAATACAGAGA              GTCATG CATCT CAGGAC              CGCATACTGGTGATT  43 19
CH53_RS06980 NONE
CH53_RS06975 1607885 .. 1607897 -  -9.1    -4.371   TTCAGCATATTAAAA                CGGCT TAG AGCCG                CAGGTGTGTCTCTTG  83 363
CH53_RS06965 1603033 .. 1603064 -  -7.3  -3.32293   TTAAAGCTAAATAGA      CGGGCTTCGGT GTAATACAGT ACCGAAGCCAG       TATTATTAGTTAGAA  65 35
CH53_RS06955 1600653 .. 1600673 -  -7.5  -3.21416   GATTTGTATCATCAA            CAGCATACG CTG CGCTTGCTG            CGGCAGTTGACCAAT  60 490
CH53_RS06920 1592420 .. 1592441 - -14.5  -4.82901   GCCGTGCCACAAAAA           CAAGCCGCA TCCT TGCGGCTTG            AGCATTACATCAAAT 100 30
CH53_RS06915 1591193 .. 1591206 -  -2.5  -3.13899   AATTCCTTATTAATA               TATTT TACG AAATA                CTGCCTAATCCCGTT  44 16
CH53_RS06910 1589816 .. 1589836 -    -4  -4.07568   GTTTTTTGGGCAAAA           CACGG-GCT TTTA AGCGCCGTA            ATTATATTAATTTGT  59 27
CH53_RS06905 NONE
CH53_RS06900 1586186 .. 1586213 - -14.3  -3.19081   TAGCGAATTAAGATA        TTAGCCCCTCT TGTTAG AGAGGGGCTAA         CAATTATAACGTGTT  95 29
CH53_RS06890 1582812 .. 1582841 -  -7.1  -3.79747   TGATTTAGTACTAAA       CGGTTTGGCTCTGC CTG GCAGAGCCAT-CTG       ACAATCGTCTGTTCT  71 271
CH53_RS06875 1579072 .. 1579085 -  -5.3  -4.30987   AGTTCGCATAATAAA               GTGAT AATT ATCAC                AATTGATTGATTCGC  65 288
CH53_RS06870 NONE
CH53_RS06865 NONE
CH53_RS06860 1574592 .. 1574616 -  -6.4  -6.20267   GTAAAAACAAAAAAA         GAGGTACC-GC TTTC GCTGGCACCCC          AAACGTCAAAGAAGA 100 51
CH53_RS06845 1572234 .. 1572245 -  -4.4  -3.79251   CACGGCAGCACTAAA                CTGT CAAA ACAG                 ACTGATGGTTATTTT  59 34
        garR 1571287 .. 1571299 -  -5.5   -3.0094   CGGTATCCACAGACA                CCGGT GCC ACCGA                TTAACGAGTGACTTC  53 26
CH53_RS06835 1569934 .. 1569960 -  -8.8  -3.76224   GCGCTAGCGAGGAAA         TCAGGGCCAA TCGATCG TTAGCCCTGA         TAGAGATTTAGCGAT  73 64
CH53_RS06830 1568530 .. 1568558 - -13.1  -2.65264   GTATCAGCGATATCA        TCAGGCCGGGTGA CAC TCACTCGGCCTGC        CCTTCTTACTATCAC  90 77
CH53_RS06815 NONE
CH53_RS06810 1562356 .. 1562377 -  -2.9  -3.05644   CTTATAACCACAAAC           GTTACCGGAC GAT GCCCGGTG-C           AGCGCCACGAGCAGC  43 5
CH53_RS06805 1560139 .. 1560174 -    -9  -2.96873   ATTTGCAGCAAACCA    TGCCACGCTAAACCAT GCGA ATGGTCTGGCGCGGTA     GGTTATCAATTACTG  69 35
CH53_RS06780 1553831 .. 1553855 -  -2.2  -3.22774   CAGATTTAGGATTAA         TATCGG-CACG CCTT CATAACCGATA          CCGTGACATTCTAAG  43 210
       groES 1553486 .. 1553498 -  -4.8  -3.02381   TCAGAAGATTAGAGA                GCGT GAATT ACGC                TTCAACAATTGCCAG  51 20
       groEL 1551706 .. 1551737 - -12.4   -4.5954   TGATACTAGATAAAA      TAAAAGCGAGCAGG TCAC CCCACTCGCTTTCA       TCAACAGCTTGTTCC 100 81
CH53_RS06765 1551015 .. 1551040 - -13.3   -3.8969   TGATGGATATAACAA         TCAGGGGATGC CATG GCATCCCCTGG          TTTATTTAAATTTTC 100 51
CH53_RS06755 1549280 .. 1549303 -   -14  -2.69468   CAGGCCCAGATAGCA          GAAAACCGCT TAAA AGCGGTTTTC           TTTCATTCTCAGCGC  91 58
CH53_RS06750 1548968 .. 1548989 -  -5.7  -4.78981   ATCAACCAAAACAAA           TCCGGCGGC AATC ACCGCCGAT            AACAACATAAACAGA  75 44
CH53_RS06745 1548457 .. 1548482 -  -7.6  -3.06261   CGTTAATCTGTAACA         GCAGATCGAA ATATGA CCCGATCTGC          TTTTCATTCCGAGAA  61 60
CH53_RS06715 1542812 .. 1542839 - -14.2  -4.99035   GTATCGATAGAAAAA        TGGCCTGACTCT GTGA AGAGTCAGGCCC         AATAATCAGGAATAT 100 165
CH53_RS06695 1536056 .. 1536098 - -12.3  -2.67512   ATATACCCAAAGTTA TTGAAACAGCAGGGGGTAAGC GCG GCT-A-CTCCTGCTGTTTCAA GGCCGCAGCAAATCC  83 161
CH53_RS06690 NONE
CH53_RS06685 NONE
CH53_RS06680 1535377 .. 1535390 -  -5.2  -3.36505   ACATTGTATGTACAA               CGCG GCATGA CGCG                TAGCGCGGCTGTGGA  54 70
CH53_RS06665 NONE
CH53_RS06660 1531873 .. 1531887 -  -2.1  -3.46178   ATAAACTCACCATAA              CCAGCA TTAC TGC-GG               TAAATGATCGTTTGC  47 79
CH53_RS06655 1530026 .. 1530036 -  -2.4  -2.64726   TGGCAGAATATGAAT                 CGGC ATA GCAG                 TTCCTTTCGCTTACG  40 36
CH53_RS06650 NONE
        miaA 1527196 .. 1527206 -  -5.4  -2.83867   CTATGCACTAACAAC                 CTGT ATT ACAG                 AGTCTAAAGCCTCTC  52 0
         hfq 1526688 .. 1526699 -  -7.2  -4.33165   TCAAACGGATTAAAA                CCGC TAGT GCGG                 AGAACATAAACCCGA  78 85
CH53_RS06635 1525361 .. 1525383 -  -6.4  -4.00348   GGTCAAGTAATCAAA           TAATTAGCCA CAC CGACTAATTA           ATAATATAACTGACC  69 19
CH53_RS06630 NONE
CH53_RS06625 1522916 .. 1522933 - -10.5  -4.35524   GTCTCAAATGGAAAA             GGCCCGC GTGA ACGGGCC              TTACTGTTACGGTCA  90 63
CH53_RS06620 NONE
CH53_RS06615 1521213 .. 1521242 - -15.9  -3.88291   TATGACGGGTATAAA       CAATAAACCGGAC CTAA GCCCGGTTTATTG        AAGTCTGAATTCTGA 100 80
CH53_RS06610 1520188 .. 1520201 -  -5.3  -2.73364   CTCTCACCCGAATCA               CTTAC CCGT GTAAG                CTCATCAGGATTCGT  49 105
CH53_RS06605 1517517 .. 1517541 -  -8.6  -3.65261   TAATAAGTAAACGAA         TG-CGGGTGAC CAAA GCCACCCGACA          ATCAGCAGGCCATTA  73 38
CH53_RS06600 1516685 .. 1516706 - -10.9  -5.25803   AATCCCTATAAAAAA           GCCAGCATC CGTG AATGCTGGC            TTTCTGAATTCAATA 100 53
CH53_RS06595 1514325 .. 1514335 -  -6.8  -4.11346   ATACCCAAAGAACAA                 GGCA GTG TGCC                 AAAATGAGGATATAA  71 463
CH53_RS06585 1513044 .. 1513072 -  -3.8  -3.35327   AGCAAATCCTCAGAA        GCTTACACCAGT AAGTG ACTGGGGTGAAC        GAAGGCAGCCAACGC  50 458
        rpsF NONE
CH53_RS06570 NONE
        rpsR NONE
        rplI 1511103 .. 1511134 - -13.9  -3.51124   ATCAATCACCAAATA      GC-AAAACGCCAGC ACGAG GCTGGCGTTTTAGC      AGGTTAACAGCAGCG  95 45
CH53_RS06545 1508618 .. 1508636 - -10.2  -4.37711   TCAGTAAATGCAAAA             GGGCGACA TCA CGCCGCCC             TTTCTGGTTTCACCG  90 51
CH53_RS06530 1504268 .. 1504282 -  -6.4   -3.8505   ACGAACATTACCAAA               CGACGA CAA TCGTCA               ATACTGATGACGCCA  66 383
CH53_RS06520 1503307 .. 1503328 - -14.4  -2.95081   TTATTTAAAACATTA           GCGGCCCC AAAATA GGGGCCGC            AATTAATTCTGTTCA  95 64
CH53_RS06505 1498856 .. 1498870 -  -2.8  -2.93348   TTTACCAACATCATA               GTTCAG GCC CCAAAC               CGATGTAAAATTGCA  43 6
CH53_RS06500 NONE
CH53_RS06495 1494619 .. 1494637 - -12.4   -5.1166   CATGAAAAGTAAAAA             CACCGCCC TGT GAGCGGTG             TTTTTTTTTGTTAAT 100 53
CH53_RS06480 1491042 .. 1491060 - -10.2  -4.15201   AGGAATGAAAGTAAA             TGCCCCGC ATA GAGGGGCA             TACTTTCGTATCTTG  89 206
CH53_RS06460 1487946 .. 1487970 -  -7.8  -5.60993   TCGGGCATAAAAAAA          CCCTGCCAGC TTATC GCTCACAGGG          TGGAGGTGACCATTT 100 110
CH53_RS06450 NONE
CH53_RS06445 1486479 .. 1486491 -  -3.3  -3.75598   CAAGCAATTGAACAA                GGCAA TGG CCGCC                ATTTGCTCGAGCCAG  53 264
        rplU NONE
        rpmA 1484797 .. 1484819 -   -12  -4.84529   CCAGAAATGTAAAAA           GCCCCGCAAC GAA ATTGCAGGGC           TTACATCTATTTACA 100 54
CH53_RS06425 NONE
        obgE 1482523 .. 1482549 - -12.3  -4.86731   GCTGTTCAAATAAAA         GGGCCACCACT GGTGA AGTGGCAGCCC         TAATTTATACTCATA 100 71
        greA 1478479 .. 1478492 -  -9.5  -4.36914   TTTGTTCTGATAAAA               GGCCG CAAG CGGCC                TTTTACTTTTCTTTA  90 92
        rrmJ NONE
        hflB 1475306 .. 1475323 -  -6.9  -5.71295   ACAGAAAAAGAAAAA             CCCCGAG CAAG CCCGAGG              TTTATATTAATCACA 100 66
        folP NONE
        glmM 1472920 .. 1472946 -  -8.7  -2.53876   CTTCAGCGTAATTTA         TGGGGAAAGAG TTACG CCCTCCCCCCA         TAAAAATACCATTAA  64 37
        secG 1472339 .. 1472349 -  -3.2  -3.09516   GTTTTTACTATTTAA                 GTCG TCA CAAC                 CATTTTAAAACTTTT  45 74
CH53_RS06365 1472183 .. 1472193 -  -5.4  -2.84504   ACGTGGCAAATATTA                 CGTT GAT AACG                 ACAAAAAAGCAAGTT  52 53
CH53_RS06360 1472071 .. 1472085 -    -5  -5.79526   ACATTTGAAAAAAAA               CACTTC AGG AAAGTG               GTTGCGGGGGCCGGA 100 24
CH53_RS06355 NONE
        nusA NONE
        infB 1467157 .. 1467178 - -15.9   -4.0371   GATTCTCCAGACAAA           TTGGGGGGC CAAG GCCCCCCAA            ATGGATATAAGCAGA 100 51
        rbfA NONE
        truB 1465764 .. 1465777 -  -2.4  -2.92246   GCAACTCGAATTATA               TAGG GTATGG CCTA                CAGTGCATTTTCCTG  42 23
CH53_RS06330 1465293 .. 1465309 - -13.7  -5.24129   GCTTCTTAGAAAAAA              GGGGCCA ATT TGGCCCC              TTTCTCCCGAAACTC 100 47
CH53_RS06325 1462785 .. 1462816 - -13.8  -3.48276   CTGCCCTCGAGACAA      CACAGCCCCTCACC AAGA GGTAAGAGGCTATG       GAATACTTTATTACT  95 36
CH53_RS06320 1461775 .. 1461792 -  -4.1  -3.15544   TGTTAGGGTGATTAA             CGTTGGT AAAA ACCAAGG              TAGTCAGGCTAATAG  48 52
CH53_RS06315 1459581 .. 1459596 - -10.4  -5.77988   ATAGACATAAAAAAA              CCAGCC CTTG GGCTGG               TTTTTATTTTTAATC 100 59
CH53_RS06295 NONE
CH53_RS06290 1454988 .. 1455004 -  -5.1   -5.3104   GCAGCAAAAAGAAAA              GCTGG TAGTTAG CCAGC              CTTCTTCATTGCTAT  85 53
CH53_RS06270 1449226 .. 1449236 -    -4  -3.61175   TACATACCAGAAACA                 CTAT TAC ATAG                 AATCGAAAAATAGCA  52 62
CH53_RS06265 1448177 .. 1448189 -  -4.1  -4.15453   TAACCCATTCCAAAA                TAACC TTC GGCTA                TTTATTGCAAAGCCC  62 336
CH53_RS06195 1435392 .. 1435416 -  -7.3  -4.19238   CGCCCAACGTCAAAA          TCAAAACCT TTTCTTT AGGTTTTGA          TGTTTAAAAGCACAT  76 350
CH53_RS06165 1428934 .. 1428955 -  -8.1  -3.32031   ACTAAACATAACAGA           GCCGAT-CAT CGG ATGTATCGGC           TTTTAATTATTTTCA  66 168
CH53_RS06155 1426816 .. 1426840 -  -8.5  -2.80411   AAAAAACTGTAATTA          TTCAGGGCGCA TAA CGCACCCTGAT          AGTATTAGCTGGAAA  66 454
CH53_RS06130 NONE
CH53_RS06125 NONE
CH53_RS06120 1418335 .. 1418350 -    -9  -5.76633   TTAGATACAAAAAAA              GACGTC AATA GACGTC               GATTTTGTACTAGTT 100 40
CH53_RS06115 1416814 .. 1416836 -  -7.8  -3.73756   TACGGGATGAAAAGA           TAGCCATC AACCAAA GATGGCTA           ATCAAATTTATTCAA  70 115
CH53_RS06110 NONE
CH53_RS06105 1411852 .. 1411871 -  -8.6  -4.12267   AGCATAATAATTAAA            TAAGGACC AATA GGCCCTTA             ATAGTTAAATACTTC  79 30
CH53_RS06100 1410339 .. 1410351 -  -4.7  -3.89524   ATTGCACCTTACAAA                CCGGC TGG GCTGG                AGTCACGACACCTTC  59 176
CH53_RS06080 1406086 .. 1406102 -  -5.2  -3.08679   TTTTCTCATTTAAGA              TACAGA TCATT TCTGTA              TTGTAACATATTATT  51 173
CH53_RS06075 1405375 .. 1405408 -  -4.1  -4.16251   ATATAAGTCTGAAAA     TAAAAGTCATATT TAAATAAG AATATGGCTTTTA      TTTTAGATAAGCTAT  61 88
CH53_RS06060 1401922 .. 1401936 -  -2.8  -3.43246   GAAAAAATAAGTGAA               GGGTTA GTC TAACCA               TTATGATTGATATCT  46 99
CH53_RS06035 NONE
CH53_RS06030 1396200 .. 1396216 -  -2.1  -3.97308   GGGAAAGAGAGCAAA              CCCACGC CAT GACTGGG              CTGAGAGCACAGAGC  53 175
CH53_RS06020 NONE
CH53_RS06015 NONE
CH53_RS06010 1390733 .. 1390745 -  -7.7  -3.54743   GATGATGAACCAGAA                CTGGA TGT TCCAG                TCGAAGGATAAGAGT  68 320
CH53_RS06005 NONE
CH53_RS06000 1388533 .. 1388548 -    -9  -5.76633   TTAGACATAAAAAAA              GACCTC AGTT GAGGTC               TATTTACATACTAAT 100 211
CH53_RS05995 NONE
CH53_RS05990 1386894 .. 1386927 -  -6.1  -3.29987   TATAGGATCACAAGA     GAACTTTATGTAGGA ATAA TCCTACACGAAATCC      CATCTAAAATTTCAT  60 283
CH53_RS05985 1383180 .. 1383201 -    -8   -5.9218   CATATAACAAAAAAA           GCCAG-GGG AGTTA CCCTCTGGC           CTTCATTTTAATCAT 100 96
CH53_RS05970 1380805 .. 1380847 -    -8  -4.43272   ATTCAAAATGGAAAA TTTATTTACCCCTATATCTT TAT AAAATAAAAGGGTGAATAAA TCTTATTGATGGGCC  80 166
CH53_RS05965 1378253 .. 1378267 -  -2.9  -3.65475   CACTGAAAATAAAAG               TGATT CTTTT AATCA               TGTTGATTCCTTAGA  50 23
CH53_RS05960 NONE
CH53_RS05955 1376184 .. 1376194 -    -4  -3.59406   CAAAATAAAAAACCA                 CTTA CAA TAAG                 AATGTTTGCAGAATC  52 339
CH53_RS05945 NONE
CH53_RS05940 1371948 .. 1371984 -  -7.9  -5.15969   CTTCAAGCCAAAAAA    CCACCGACAAAACGCAG ACT CTGAGTAACGTCGGTAG    CCTGTCTTATGGTAG  88 453
CH53_RS05935 1371461 .. 1371486 - -11.9  -3.33696   CGCCGTTTTAACGAA         CCACCATCGACC GAT GGCCGA-GGTGG         TTGATCTCAAATTCC  86 32
CH53_RS05900 1366740 .. 1366760 -  -6.9  -2.70932   GCTTTCGCTCAAGTA            GACTAACGA TGG CCATTAGTC            TACTTGAGCGAAAGT  56 56
CH53_RS05895 1365943 .. 1365953 -  -6.8  -3.02511   GTGAGTTTGCTAATA                 CCCA TTC TGGG                 CTATCCGCATGCGGG  55 465
CH53_RS05885 1363841 .. 1363863 -  -7.8  -3.53012   CTGCTGGCCGCCAAA           CGTAATACAG CAC CTGCATTACA           CTTCTTTCGCAAAGC  66 217
CH53_RS05860 NONE
CH53_RS05855 1351400 .. 1351411 -    -3  -2.99273   TTGATCACGATAAAG                TACA CCCT TGTA                 GTTCAGATAAACTGG  43 28
CH53_RS05850 1350042 .. 1350080 - -12.6   -2.6072   CAGGTAATGAATGGA   TTTCCAAATACTCCCCGC ACA ACGAGGAGTATTTAGAAT   AACGTTAAATCGCTT  83 30
CH53_RS05840 1348338 .. 1348348 -  -2.4  -3.63766   TATGGATAAACAAGA                 CTGG CAT CCGG                 CAGATATTATCGCGG  50 310
CH53_RS05830 1347954 .. 1347975 -  -2.4  -5.07053   AACTATCCCAAAAAA           GGATAAGTA TACGT TACTTA-CC           TTATCGGTACAGTTG  69 21
CH53_RS05825 1347570 .. 1347599 -  -2.3  -4.07568   TCCCCTGCCTTAAAA       TTATGGTTC-AGAA CAT CCCTCAAACCATAA       CCACTCACTATATTT  53 88
CH53_RS05795 NONE
CH53_RS05790 1340099 .. 1340129 - -11.9  -2.52896   TGATGCCTTAACCGA       TACGGGCAGCAGA TTTCC TATGCTGCCCGCA       TGTTGGAACCGCAAG  81 64
CH53_RS05755 1332617 .. 1332630 -  -3.9  -3.30459   AAGTAAAATAGCCAA               TCAAA TCAG TTTGA                TAATTGATCTCGCTG  50 12
CH53_RS05750 1330817 .. 1330859 -  -4.7  -3.05935   ACAGCGCGCAGCCAA CGGAGC-GTACACGCAGTACG TGA CGG-CGGCGAGCACTGCCCCG AAGCTCAAGCTGGCA  49 57
CH53_RS05745 1329153 .. 1329165 -  -7.7  -3.01119   AGTTACTGACAGATA                TGCGT TAC ACGCA                CATTACTGGCTTTGA  63 28
CH53_RS05740 1327792 .. 1327832 - -17.1  -3.80841   ATCATTATTACGAAA  TCAATAAAAACGGCCCC ATTAGTA GGGGCCGTTTTTATTGC  ACGTCACATTCACAG 100 63
CH53_RS05735 NONE
CH53_RS05730 1323509 .. 1323553 -  -7.4  -3.98083   CACGTAACGGATAAA TAGCCAATAGAGAAATAGC GCTGCTTT GCTA-TTCACTATCGGCTA TTTTTTTAAGAGCAA  73 295
CH53_RS05725 NONE
CH53_RS05720 1319083 .. 1319104 -  -9.4  -5.61596   ACCGCCATAAAAAAA           GCTGCCCC GATAAA AGGGCAGC            GTTGGTCATTCTCGG 100 64
        gldA 1317642 .. 1317674 -  -9.2    -3.224   GAATGCTGGAGAACA     GAG-CTGCCGATGAT GCAA AACACCGGCAGACTC      AGTCGATTTTCTACT  70 63
CH53_RS05710 NONE
CH53_RS05705 1315743 .. 1315759 -  -4.3  -3.15544   GTCCAGCCTGATTAA              TGACTGG CAA CCTGCCA              TAGCGCCTGCATCAT  51 5
CH53_RS05700 1314212 .. 1314241 - -13.7  -3.85698   GTCTGGCTCCACAAA       TTGCAGCTCTGGA GTGA TGCAGAGCTGCAA        TTTTTAGTTAATCAT 100 58
CH53_RS05665 1304389 .. 1304418 -  -2.2  -4.35524   TGGCGAAAGGTAAAA       CTT-CATCGGCTG GATAT CAGCCAATTTAAG       GGTGGCGAGTCACTG  59 52
CH53_RS05625 1293583 .. 1293596 -  -3.1  -2.54325   CTTCCTGAAATACAC               GCAGA TACC TCTAC                TTACCAAAATTCAGT  42 77
CH53_RS05600 1290591 .. 1290622 -  -2.2  -3.83502   TATTCCGACATTAAA      GGCCGCTTCGAGAT GATT ATTTCGAACCCACC       GTTCCATGATGGCAT  52 263
CH53_RS05590 NONE
        rimI 1288700 .. 1288720 -  -2.5  -3.59979   CCTGCTTATGTGAAA            TTGCAGC ACGGTTG GCGGCAA            TTCCTACGTCGGGTA  48 181
        prfC 1286954 .. 1286974 - -15.5  -3.48466   AGGAGAATTAATGAA            TCGGGGTAC TGG GTACCCCGA            TAGAATGCGGCTTGG 100 48
CH53_RS05575 1286001 .. 1286040 -  -9.4  -2.55446   GACAAACTTATTAAC  GGGTATCCCGTGGG TTATTTTATTTC CCCACGAAATACCC   ATCAGCCGATAATAA  70 41
CH53_RS05570 NONE
CH53_RS05565 1283320 .. 1283335 -  -7.6  -4.34263   CTTGAACAACACAAA              TGTGAC AAAA GTCACA               TTAAAAGACAGAAAT  78 91
CH53_RS05560 1281799 .. 1281811 -  -4.7   -4.0014   ACCATAAAAAACTAA                GCGTC AGC GGCGC                AGACAGTTTGGGTGC  61 131
CH53_RS05555 1280411 .. 1280443 -  -9.8  -4.64157   TAAATAAGGATAAAA      GCCGCACTACAGGC TAGTC GCCCGCAGTGCATC      AGCAAAACTCAATGA  91 53
CH53_RS05550 NONE
CH53_RS05545 1277472 .. 1277486 -  -4.2  -3.17229   ATTTCAGCATTAATA               TGTGGC GTA GCCATA               ATCACTTTCCTTAAA  48 248
        deoD 1276717 .. 1276744 - -15.7  -3.13371   GATTTTATGAATAGA        TTCAGCGGCAG AGATCG CTGCCGCTGAA         TAGAGGGAAGCAGAG 100 47
CH53_RS05535 1274854 .. 1274868 - -11.4  -3.09193   ATCAGATTGATGGAA               CGCTGG TCG CCAGCG               CCGGAGAGAACGTAA  78 421
        serB 1273328 .. 1273344 -  -3.1  -3.76413   GTTCAAAATGGCAAA              TAAAATA GCC TATTTCA              TCGTTCTTCGTGCTT  52 23
CH53_RS05520 1271742 .. 1271766 -  -3.5  -2.99609   AACACGACTAAATTA          GCGGTTATAAA TCC TCTAACACCGC          CAGCGCATCAGCCAA  45 5
CH53_RS05515 1270160 .. 1270203 -   -11  -4.16943   CCTGACAGTGGAAAA CCTGCATGCCGCCCACGCGCA AGT TGCAGGCGGGC-ATATGCAGG GTAAAGTCGTTATTG  90 220
CH53_RS05505 1268139 .. 1268154 -  -8.2  -3.23447   CCAACCCCGATAACA              GCCCGG TAAG CCAGGC               ACTACGAGAAGTGTT  64 86
CH53_RS05475 1261823 .. 1261839 -  -5.9  -3.39327   GCCCTATATTGACAA              GCTAATT AAT AATCAGC              TCATTATCATGAAAC  56 84
CH53_RS05470 1260739 .. 1260749 -  -2.4  -3.84246   TGCTCAAGCAGGAAA                 CCCG TGA CGGT                 ACTGTGTATTGGTTG  52 168
CH53_RS05435 1249532 .. 1249574 - -15.7  -2.96656   GATATAGCCAAAGGA CTTGGCGTTGCGGGGCTGCC AGTA AACAGCCT-GCAACGCCAAG GTAGTAAGCGCCGCT 100 291
CH53_RS05430 1248846 .. 1248863 -  -4.1  -3.74872   AGCTAGGCGACGAAA             TGGCAGT TTTA ACTGGCA              TTGCGAATGTTAAGC  55 228
CH53_RS05420 1247438 .. 1247451 -  -5.9  -2.62735   AGATTTTCTATACCA               CGGCC ATTG AGCCG                CAGCATGTTCCGGGT  51 277
CH53_RS05410 1246106 .. 1246125 - -12.2   -4.8048   TCTCTACAGTAAAAA            GCCAGCAT TTCT ATGCTGGC             TTTTTTATATCTATC 100 47
CH53_RS05400 1244888 .. 1244915 -  -5.8  -3.63569   GTAATGGCGGAAGAA        TATTGATTTTAA ACAA TAAAAATCAATA         GATTAGAAAAATTTT  60 229
        thrA NONE
CH53_RS05390 NONE
CH53_RS05385 1239132 .. 1239148 -  -7.9   -3.5936   TTTAAAGCGGTTAAA              CCGGCCA AGC TGGCAGG              CTCACTGATTAAACC  66 413
CH53_RS05375 1237080 .. 1237095 -  -8.2  -5.45652   ACGGGCAATAAAAAA              GGCGGC TTAC GCCACC               TTTTATCTGACACAC  93 49
        mogA NONE
CH53_RS05365 1234832 .. 1234853 - -11.7  -3.91984   ATACCGGGCAAATAA           TAGCCCATA AAGT TATGGGCTA            TTTCCTGGCAGGGAG  91 47
        dnaK 1229166 .. 1229207 -  -8.5  -3.04144   TTCCTACCCTTAACA TGCGTGCACGGGCGTAGAG TTTC CTCGACGCCCGTGCTGGTT  TCCAGCAACAGTAAG  67 72
CH53_RS05345 1227943 .. 1227962 -  -5.7  -5.58454   CGGAGATGAAAAAAA            TCCCCGA GGTTAA TCGAGGA             TTTTTAGTTTTCTTG  93 71
        nhaA 1226534 .. 1226563 - -13.6  -4.88405   AATTGCCAAACAAAA       CCGCCGGTGTCA TTACCC TCACACCGGCGG        TGATAAAACGCCATC 100 55
        nhaR 1225278 .. 1225308 - -11.3  -3.54543   ACTTAGTCGCGCAAA       TCAACGCAATGCA GTAAT TGCATTACGTCGA       TTGCTTAGTAAAAAG  88 244
CH53_RS05325 NONE
        ileS NONE
        lspA NONE
CH53_RS05310 NONE
        ispH 1218841 .. 1218858 -  -8.4  -5.29782   TATACCCATAAAAAA             GCAGCC ACTGAG GGCTGC              TTTTTAACGCTGAAG  93 52
CH53_RS05300 1217616 .. 1217634 -  -8.2  -5.88476   AAAACAAATAAAAAA             GGACAATA AAA TATTGCCC             TGTTATCAAACGATT 100 81
CH53_RS05295 NONE
        carB 1212751 .. 1212774 - -18.2  -5.32882   TATGAGCATAAAAAA          GGGGGCGATG TCTC CATCGCCCCC           CTTTCTTAGCGCCCA 100 43
CH53_RS05280 NONE
CH53_RS05275 1210346 .. 1210362 -  -3.7  -3.59583   ATAATCATGTTTAAA              CCCTGTA GGC TACAAGA              GCCAATACCGAAAAA  52 151
        folA 1209810 .. 1209834 - -11.5  -5.18561   TAAAGATTGAAAAAA          CAAAGGCTCAT AAT ATGCGCCTTTG          TTTTTAGTGAAGATC 100 47
        djlA 1201622 .. 1201645 -  -9.6  -2.70532   ATCGGCACAAACTGA          GTATCGGGTG CTTT CACGCGATAC           TGATGGCAGCACACG  66 333
CH53_RS05215 NONE
CH53_RS05210 1193662 .. 1193673 -  -4.4  -3.53224   CATCCGGGGTTGAAA                CTCA GCCA TGAG                 CAAAAGTTACTGTTA  52 437
CH53_RS05185 NONE
CH53_RS05180 1185188 .. 1185213 -  -8.3  -5.67063   GGCAGGATAAAAAAA         GCCAGCAGATT GTTG AACCCACTGGC          TGGTGAAAAACACCA 100 123
CH53_RS05175 1183826 .. 1183841 -  -3.2  -3.18912   TTACCCATCTATTAA              GCTCTT TCGC AAGCGC               CCTGCGGGGCGCTAT  46 37
        leuO 1173283 .. 1173296 -  -2.3  -2.52896   CCATCTTTCAAGTTA               CTGCT GTGA AGCGG                CTTGCGCTTATCCAA  39 418
CH53_RS05135 1171397 .. 1171426 -   -10  -4.04397   ACGTTCAGAAAAACA       GCGGCTGCCTGT ATCAGA ACAGGCAGCAAC        ATGATGACAGTATCG  86 42
CH53_RS05130 NONE
        ilvH 1168742 .. 1168761 -  -7.8  -6.44931   AATAAGAAAAAAAAA            GCCCGACA CACC TGCCGAGC             CTGATTATTGGAGAT 100 63
CH53_RS05120 1167408 .. 1167431 - -13.9  -3.02144   CTACTCGGCCCAACA          GCGGCCTCA CCTCGT TGAGGCCGC           TGTTGGCTTCCTACA  93 93
CH53_RS05110 NONE
CH53_RS05105 NONE
CH53_RS05100 1164207 .. 1164219 -  -3.3  -3.05463   ACCTTGGCTACTCAA                CGTCA TGG TGGCG                ACTAATTCCTTTATT  45 54
CH53_RS05095 NONE
        murE NONE
        murF NONE
        mraY NONE
        murD NONE
CH53_RS05070 NONE
        murG NONE
CH53_RS05060 NONE
         ddl NONE
CH53_RS05050 NONE
        ftsA NONE
CH53_RS05040 1149094 .. 1149104 -  -3.2  -2.74122   GTTTAGCACAAAGAG                 CGGA GAT TCCA                 AATATTCGAAAATTA  43 38
        lpxC 1147979 .. 1148016 - -13.6  -2.75803   ATAATATTGGAACGA   TTGGCTGCGTTGGC CGGAGAGAGT GCCAACGCAACCAA    AAGTGATAAGTAGCT  91 106
CH53_RS05025 1146762 .. 1146780 -  -6.6  -3.31248   TAATATCTCTTACAA             GACCACCA AAC CGGCGGCC             AAAGGTTGTATAAAA  62 182
        secA 1143965 .. 1144004 -  -6.4  -6.02345   GAACGACAAAAAAAA  CTAAAATAAAGGGCGGTT TTTA AGCCGCCCTCATTTTCAG   TATCACCAATGGCCT 100 47
CH53_RS05015 1142983 .. 1143010 -    -2  -3.85698   CGTTGCGGGCACAAA        TCAGCTTGAATG GTTT CTTTCAAGATAA         TGCCGAAGGTGCTGA  52 513
CH53_RS04995 1140432 .. 1140453 - -10.1   -3.5771   AAAAAGGCTTCGAAA           CAGGGCGTT AAAT AGCGCCCTG            TTTACATCAGTAATC  79 39
CH53_RS04970 1135318 .. 1135331 -  -8.1  -2.76263   TTTAGCACTTAACCA               GCCCT GAAC AGGGC                ATATGCCTCCCGGCA  62 123
CH53_RS04965 1134181 .. 1134204 -  -9.5  -3.16154   CAACATCATAGCTAA          CGGGTCAGC CACAGC GCTGGCCCG           TTTATTTTATTGTTT  73 253
        pdhR 1131019 .. 1131032 -  -5.3  -3.61517   AGTTGCCGCTAATAA               TTCTC AAAT GAGAA                TAACTACCCAACGAA  56 203
        aceE NONE
        aceF 1126304 .. 1126328 - -17.2  -5.00642   TAATCTATATAAAAA          CAAGGCCGGC ACGAA GCCGGCCTTG          GCGATTACATCACCA 100 30
CH53_RS04940 1124638 .. 1124657 - -11.4  -5.95539   CTTTAAACAAAAAAA            CGGCCCCT GTTA AGGAGCCG             CTTCATTATCTTACT 100 55
CH53_RS04930 1120978 .. 1121005 - -10.7  -4.13995   TGGCGATAAATGAAA        CAGAAACAGCC GATAAT GACTGTTTCTG         CTTTGCCAAAAGACG  90 65
CH53_RS04925 1117761 .. 1117781 - -18.3  -4.45168   TGTTTAAAATAGAAA            CGGGAGGCC ATT GGCCTCCCG            TCAGATACGGATTAT 100 123
CH53_RS04920 1117055 .. 1117065 -  -2.4  -4.72986   TATTGCCATGAAAAA                 GGGC AAT GCCA                 CATTAGTGGCTGCGT  67 233
CH53_RS04895 NONE
CH53_RS04890 1111124 .. 1111138 -  -7.8   -3.8709   AAACGTGGGCAGAAA               GCCATG ATT CACGGC               TGGGTCTATGGTATT  70 396
CH53_RS04880 NONE
CH53_RS04875 1108429 .. 1108441 -  -3.4  -3.61894   AATCTTTGCTAATAA                CCAA AGTCA TTGG                CGTTACAGCAAGGCG  52 256
CH53_RS04870 1106881 .. 1106900 -  -9.3  -5.31275   TTGCACCATAAAAAA            GGCGCTT AAACAA AAGCGCC             TTTTTCACACCGTAA  93 59
CH53_RS04815 NONE
        mrcB 1093432 .. 1093458 - -14.5   -4.2704   TGGAGCATGAATAAA         CTGGCACGGTC GCGAT AACCGTGCCAG         TGGGTTGAATGTTAC 100 37
CH53_RS04805 NONE
CH53_RS04800 NONE
CH53_RS04795 1089163 .. 1089173 -    -4  -3.57441   AATTGATAATTATAA                 TTAG CGT CTAA                 GGAACGCGATGATTT  52 327
CH53_RS04785 NONE
CH53_RS04780 1085027 .. 1085045 -  -6.6  -3.09635   ATCCCGATGAGCTAA             CCCAAGCC AGT GGTTCGGG             TAAGTGCATGCAGCT  60 74
CH53_RS04760 1080858 .. 1080868 -  -5.4  -3.15427   AATATGGGGGATGAA                 GTTC ACG GAAC                 CAATAATTGGAATAG  54 107
CH53_RS04755 1079081 .. 1079106 - -10.5  -5.31275   CTTCAGCATAAAAAA         GGGCACAG-TCA TAA TGAACTGCGCCC         TTTTGGCGTTATTAA 100 47
        rumA NONE
        relA 1072602 .. 1072616 -  -4.2  -2.76263   CGCAGTACGTAAGGA               GGGC GAGCACT GCCC               AATATCAATATGCCA  46 70
        mazG NONE
        pyrG 1069763 .. 1069790 - -13.4  -2.94938   CTAAAACTCCAGACA        GAGGGGGCGACA TCGC TGCCGCCCCTTC         TATCAAATATTTTAT  91 37
         eno 1068368 .. 1068385 - -12.7    -5.626   TATGCCATAAAAAAA             CCCGCCT ATTA AGGCGGG              TTTTATCAACAAACT 100 67
CH53_RS04720 1067491 .. 1067501 -  -6.8  -2.75957   CATTAAGGTCAATGA                 GCGA TTA TCGC                 AGATTCTCTGGCTGT  57 102
CH53_RS04715 1066753 .. 1066773 -  -7.5  -3.39895   GGGCCGAGTAATGAA            CGCCGCAAC ACC GCTACGGCA            GCAAGGACGAAGGGG  65 42
        cysJ NONE
CH53_RS04700 NONE
CH53_RS04695 1061498 .. 1061520 - -10.5  -5.28561   AATAGATAATAAAAA           TGAGGGCGC AGGTA GCGCCCTCT           GACCACTGATAAAAT 100 173
CH53_RS04675 NONE
CH53_RS04670 NONE
        cysN NONE
CH53_RS04660 NONE
CH53_RS04655 1054150 .. 1054182 -  -6.4  -3.32997   CTGTTACAAATTGAA      GCGGGCTATT ATCGGATGAAACG AATAGCCCGC      CGATTTACTCACCAT  60 34
CH53_RS04635 NONE
CH53_RS04630 1050303 .. 1050315 -  -4.8  -3.02144   TTACTGGCTGCAACA                CCCA TTATT TGGG                CTATTGCCGTTGGGT  51 26
        ispF NONE
        truD NONE
        surE NONE
         pcm NONE
CH53_RS04605 NONE
CH53_RS04600 1044740 .. 1044759 - -12.2  -5.65177   ACAGGCATAAAAAAA            CGGTGAAC ATCT GTTCACCG             TTTTTGTGTTTCATA 100 97
CH53_RS04590 NONE
CH53_RS04585 NONE
CH53_RS04580 NONE
CH53_RS04575 NONE
CH53_RS04570 NONE
CH53_RS04565 1035026 .. 1035042 -  -6.7  -2.62788   ACACACTATAATCCA              TACAATT AAA AATTGTA              AAAATCATGCAAAAA  56 185
CH53_RS04550 1031924 .. 1031939 - -10.4     -3.67   TTAATTGTCAAAAGA              GCTCCC AGAA GGGAGC               TTTTCTGATATAAGC  80 42
CH53_RS04530 NONE
CH53_RS04525 1027970 .. 1028004 - -11.7  -2.82519   GGACTATAGCAATTA    GCAAGAGCTAACTCAGC GAA GCTGAG-TAG-TCTTGC    TTTACTTGCTCTTCG  81 63
CH53_RS04520 1026927 .. 1026941 -  -8.6  -3.57971   ATACTTACTGCTAAA               CTACAC AGA GTGTAG               GATACTTATATTTAC  72 189
CH53_RS04495 1021412 .. 1021435 - -15.4   -4.4261   CTTTCAAGAGGAAAA          GACATGCGGA AGAA TCCGCATGTC           CAATTAAAAAAGGGG 100 45
CH53_RS04490 NONE
CH53_RS04485 1018207 .. 1018223 -  -2.2   -3.0094   CGGCACCGAGATATA              GCGGTT ACCTG AACCGG              CTTTAGCCATCTGGC  42 57
CH53_RS04480 NONE
CH53_RS04475 NONE
CH53_RS04470 NONE
CH53_RS04465 NONE
CH53_RS04460 1015231 .. 1015244 -  -2.3  -2.71523   TATTGAAATAAAATC               GGGGA GAAC TCACC                ACTCAATAATATTCC  40 28
CH53_RS04455 1014161 .. 1014201 -  -7.3  -4.78752   ATTACAACTTAAAAA TAGCATTTATTTA-ATCT TGGATG AGATATAAATAAATGCCA  TGGGATATTCCTGCC  83 158
CH53_RS04450 1013750 .. 1013784 - -14.4  -2.75708   TGGTTTTAAAAAAGT     CAGGCAAGTGCAGAAA TCC CTCCCACACTTGCCTG     GGATACGATTAAATA  93 66
CH53_RS04445 NONE
CH53_RS04440 NONE
CH53_RS04435 1009801 .. 1009811 -  -2.4  -3.22774   TATACGCATGATTAA                 CCCG CAA CCGG                 TGTCAGGCGGCTTAA  43 11
CH53_RS04430 NONE
CH53_RS04425 NONE
CH53_RS04420 NONE
CH53_RS04415 NONE
CH53_RS04410 NONE
CH53_RS04405 NONE
CH53_RS04400 1002140 .. 1002155 -  -7.5  -4.76213   ACAAAGCTAAGAAAA              GCGGG GAGTTG CCCGC               CATCCCTGCGTAATT  83 83
CH53_RS04395 NONE
CH53_RS04390  998848 ..  998863 -  -6.1  -3.06815   ATCTCCCCCAACATA              CAGCG GCTTAA CGCTG               CTTATACACCTGTAA  56 17
CH53_RS04385 NONE
CH53_RS04380 NONE
CH53_RS04375  996040 ..  996051 -  -2.2  -3.37198   TTTGCAGACATAACA                GGCT CCTT AACC                 ATTCATCCAGGCCGG  45 20
CH53_RS04370  995058 ..  995071 -  -3.1  -4.15788   AAGCTGGTCAACAAA               CGGTT GGAA AACCA                AGAGTTGATTATGCC  59 198
CH53_RS04360 NONE
CH53_RS04355  991295 ..  991322 - -12.1   -4.7254   ATTTTTCAGCAAAAA        CAAACGAGGCA ATACTG TGCCCCGTTTG         TTTAACTTCATAATG 100 53
CH53_RS04350  988827 ..  988859 -  -7.8  -4.08064   AATTGGCGTTTAAAA     TGGCCGCCATCTTTG GTTT CAAAGA-AGCGGTCA      AACAGGCGTCACCGG  73 399
CH53_RS04340  986256 ..  986279 -  -3.8  -3.52919   ATGAGCCAATCACAA          GAGCTGCCGT TATT ACAGGAACTC           CAGGCTATTTTGCGT  52 148
        araD  958899 ..  958913 -  -8.6  -3.14931   CGGATTTGCCAGGAA               TTGGTG AAA CACCAA               AATATTGAGTTAATC  64 379
CH53_RS04190 NONE
CH53_RS04185  950612 ..  950647 -   -10  -3.14211   ATTGTCTGGTATCAA    TAAAGCAGTGAGGATTA CCC TACTC-TCACTGCTTTA    TGATGAATCTGTGAC  75 56
CH53_RS04180 NONE
CH53_RS04175 NONE
CH53_RS04170  946425 ..  946437 -  -7.7  -3.20349   GGCGTAAACCCAACA                TGAGC TTT GCTCA                GTAGCCATCAGGCTA  65 44
CH53_RS04165  945633 ..  945643 -    -4  -3.75402   TGTTAATCAAAAAAC                 TGAA AAA TTCA                 CTCTTGATTCTCTGA  55 103
CH53_RS04155  943758 ..  943777 -  -2.8   -3.0127   GCACTGAACCACATA            CTGCCTCCT GTC AGGAGGG-G            CGATTACGCCCCTCA  43 97
CH53_RS04150 NONE
CH53_RS04145 NONE
CH53_RS04140  940387 ..  940399 -  -3.4  -4.13561   TGGTGCTAAAAAATA                GCTT TCATC AAGC                CTGACCGGAAATCCT  56 127
CH53_RS04135 NONE
CH53_RS04130 NONE
CH53_RS04125 NONE
CH53_RS04120  935434 ..  935454 -  -7.6  -4.53303   GAGGGGTAGAGAAAA           GTGCCGCCA TTCG TGGCG-CAC            TGACGGGTAACTATA  81 167
CH53_RS04105  932341 ..  932360 -  -5.8  -2.72839   AATTACCGCTAATTA            TACTGTAC AATC ATACAGTA             TCAAGCCTATTTTTA  51 38
        recA  930869 ..  930882 -  -6.7  -2.73681   CACTCACCCGAATCA               CTGAC AAAG GTCAG                CTCATCGGGACTCAT  56 337
CH53_RS04095  930275 ..  930295 -  -2.6  -4.34263   TGGGAATAAGATAAA            TTTTCTTC GAAGG GAAGTAAA            ATCCCGCGTGCATTC  60 39
CH53_RS04090  927488 ..  927514 -  -6.6  -4.88222   ATGAAAATTGAAAAA         CGCCATACCC AGCATAG AGATATGGCG         TATTGATTTAATAGA  84 52
CH53_RS04085  927063 ..  927097 -   -15  -3.16203   TGAGGAGAATAGACA     GCAGTAGCGCCTCGTG TAA CACGAGACGCTGCTTC     AAAATCAGTAAGTCG 100 30
CH53_RS04080 NONE
CH53_RS04075 NONE
CH53_RS04070  926424 ..  926434 -  -3.2  -3.37975   ATGTATGACCTAGAA                 GATG GTG CACC                 CAGGAAGATTCGAAC  48 17
CH53_RS04065  926251 ..  926266 -  -8.2  -4.72556   CTAAAAAGCAGAAAA              CCCCGC CGTA GCGAGG               TTTCTTAATATGGTG  84 36
CH53_RS04060 NONE
CH53_RS04055 NONE
CH53_RS04050 NONE
CH53_RS04045  922498 ..  922514 -  -5.8  -5.48063   AGTTAACATAAAAAA              GACGCC TTATC AGCGTC              TTTTTTGCGTTCGCC  89 50
CH53_RS04030  918467 ..  918500 - -18.3  -4.67982   CTTTAGTTAATAAAA     CAACTGGACCCCATC GGGG AACGGGGTCCAGTTG      CAATATAAAAAGCCC 100 320
        rpsP NONE
        rimM  917577 ..  917588 -  -4.4  -2.64313   ACAGGCTAATAACAC                CGAT CCAC ATCG                 CTTTGTTCCACTCAC  47 62
        trmD  916790 ..  916801 -  -4.4  -3.65902   CTTACCCTAGGTAAA                CTGA TATA TCAG                 GAAGTTGGCACGCGG  56 70
CH53_RS04010  916355 ..  916377 - -15.6  -6.23545   TTGAAATAAAAAAAA           GGGGTCAGCC AAT GGCTAACCCC           TTCATAACTATTAAC 100 66
CH53_RS03990 NONE
        tyrA  910153 ..  910168 - -10.4  -3.37796   GCTTAGGATTTACAA              GGCCCA AGGA TGGGCC               TTGTAACAAGTGCAG  77 56
        rluD NONE
CH53_RS03960  905159 ..  905173 -  -5.7  -2.85999   CTACTGGAGATTAGA               TGAGG TCATC CCTCA               AATTTTCAAGGTTAT  52 100
CH53_RS03955  902510 ..  902529 -   -15  -5.43974   AAAAGGAAACAAAAA            GGGGGCGA TTTC TCGCCCCC             TCGAGGATTAACAAT 100 40
CH53_RS03950  900381 ..  900392 -  -5.8   -4.7497   CTGATGCAGTAAAAA                CTCG ATGC CGAG                 GTCTTATTACACAAT  75 122
CH53_RS03945  900145 ..  900182 -  -8.7  -3.45839   ATTGTTAAAGAGCAA   TATCTTAAACACGACTC GTTA AAGTCATCTTTAAGATA    TTCAGTTGATAATGT  72 60
CH53_RS03940  896936 ..  896946 -  -6.8  -4.78848   CTCTCAAACACAAAA                 CACC TTT GGTG                 TTGTAAGGTTAAGCC  81 10
CH53_RS03935  896664 ..  896676 -  -2.6  -4.07568   CCGCGCTGTGCAAAA                CCGC TCTAC GCGA                TTTTGTCAGTTACCA  55 69
CH53_RS03930  896485 ..  896505 - -14.1   -5.1925   TTATAATGCAAAAAA            CCCTGAATC AGA GATTCAGGG            TTTTGCAATAAGTGG 100 38
CH53_RS03915 NONE
CH53_RS03910 NONE
CH53_RS03905 NONE
CH53_RS03900 NONE
CH53_RS03895 NONE
CH53_RS03890 NONE
CH53_RS03885  889934 ..  889946 -  -4.8  -2.91582   GACGTTACTGACATA                GGGA TATTT TCCC                ACTGCTGGCAGTTAT  50 2
CH53_RS03880 NONE
CH53_RS03875 NONE
CH53_RS03870 NONE
CH53_RS03865  884795 ..  884806 -  -4.4  -2.84693   CCTACCATCAATAAG                GCTA AGAC TAGC                 AACACCCCACAGCGT  48 48
CH53_RS03860 NONE
CH53_RS03855 NONE
CH53_RS03850 NONE
        fabG NONE
CH53_RS03840  880624 ..  880646 -  -5.4  -4.07618   TGGTCAATAAGGAAA           CCAATGGCGG TTA CGGCCAGCGG           CGGATCACCAATGAG  65 13
CH53_RS03835  880151 ..  880164 -  -2.5  -3.76492   GGCAACTTTATGAAA               TAAAT TCAG ATTTA                ACGTCAAATAATGGG  50 279
CH53_RS03825  878174 ..  878189 -  -6.8   -5.5112   TCTATTAACAAAAAA              GCCTAC AATC GCAGGC               TTCAATGGATACTGT  93 60
CH53_RS03820  877174 ..  877189 - -10.4  -4.60924   TAAAGCTGTTAAAAA              GCACCC TTCG GGGTGC               TTTTTTTATGGCTGG  91 31
CH53_RS03805  873861 ..  873873 -  -9.1  -3.57561   TGGGAATGGGTCAAA                GGCCA TGC TGGCC                ATCCTGAAAATGAAC  71 161
CH53_RS03795  872628 ..  872639 -  -2.2  -3.14672   TTCCAGCAAAATAAG                CCGT TTGC ACAG                 TTTTTCATCTGGAAG  43 46
CH53_RS03790  872437 ..  872461 - -11.5  -5.73978   ACCACAAATAAAAAA          CCCCAGTCT GTTTATA AGACTGGGG          TCTGAATGTTGGCGG 100 35
CH53_RS03785  868786 ..  868799 -  -5.9  -2.61912   GCATTCACTGAGAAG               CCCGC ATAA ACGGG                TCAGTAATTCACTTT  51 26
CH53_RS03780  867699 ..  867712 -  -3.1  -3.48276   GCTTTCCTTATAGAA               CAATG TGCA CACTG                ATTATGCGGTGACAC  50 139
CH53_RS03775  866708 ..  866725 -  -9.1  -4.62302   GAATATCGGTAAAAA             CAGGCCC CGAA AGGCCTG              CCAGAGAGTAAAATC  88 43
CH53_RS03770  865172 ..  865182 -  -3.2  -4.07687   ATGGCTGGGTGAAAA                 CTGC CGC GCAA                 GCGGGTAATGCGAAA  58 251
CH53_RS03730  856457 ..  856472 -  -2.6  -5.43621   AGAAATCAGAAAAAA              TTGAAA GAGA TCTCAA               TCAGGACGTGACCCT  80 385
CH53_RS03720  855667 ..  855690 - -14.6    -5.626   TAGCCTATAAAAAAA          GACACCCGGC ATTA ACCGGGTGTC           TGGAATTGGCTAGAC 100 75
CH53_RS03710  853110 ..  853127 -  -7.1  -3.05046   TTATTGGCTCAAAAC             GACTATT TCGG AATAGTC              CACACACCGGCGAGC  61 185
CH53_RS03705  852629 ..  852660 -  -7.3  -2.95409   TAATCAGGAAGCAGA      CGCCGTATTGC ATTGATTCTG GCACTACGGCG       CGGTGAAATTTATTG  61 59
CH53_RS03690  850970 ..  850985 -  -5.4  -5.86061   GTTTACCAAAAAAAA              TCTGAC CTGA GCCAGA               TTTAATTACAGCTAA 100 63
CH53_RS03680 NONE
CH53_RS03675  848758 ..  848770 -  -2.7  -4.33997   TATTAAAAATAACAA                TATGC AGT ACATA                GTATAGTGACCGTAG  60 58
CH53_RS03670  847459 ..  847472 -  -5.3  -3.84648   CTTAACAGCACTAAA               CTGAT AAAT ATCAG                ATTTAGATGAGGAAA  61 431
CH53_RS03665 NONE
CH53_RS03660 NONE
CH53_RS03655 NONE
CH53_RS03650 NONE
CH53_RS03645  842349 ..  842370 - -13.1  -3.14132   GCTCGCCGGGATTAA           TGAGCCTCA TCCT TGAGGCTCA            CCCTACGGGCTAGCA  91 135
CH53_RS03640 NONE
        ureB NONE
        ureC  838455 ..  838474 -    -5  -3.60971   AGCTGAAGGCTGAAA            TAACGGAG TATC CCCCATTA             AGCCAACGCCTTGCT  56 39
        ureE NONE
CH53_RS03620  836907 ..  836921 -  -2.8   -3.2661   CAAGCACTCAGAATA               CTGTTT ATT AATCAG               CTAATTACTAAATAA  44 26
CH53_RS03615 NONE
CH53_RS03610  835039 ..  835052 -  -5.3  -2.73681   CACGCACCCGAATCA               CTTAC TGAT GTAAG                CTCATCGGGATTCAT  49 180
CH53_RS03605 NONE
CH53_RS03600  832694 ..  832727 -  -8.4  -3.53712   AGTGCTAATAAGTAA     GACACTCATTAA TTAACAATGT TTAATGAGTGTC      TTCTATTTTTCAAAG  72 43
CH53_RS03590  830649 ..  830677 - -13.3  -4.62471   GTTAACGGCTAAAAA        TAAAACACCCTCA GTG TGAGGGTGTTTTT        ATCTACTACTGTAGA 100 55
CH53_RS03575  828416 ..  828434 - -14.6  -5.24129   TTTGCCCATAAAAAA             GCCGGAGA ACA TCTCCGGC             TTATCGTGTTATCAC 100 44
CH53_RS03565  826344 ..  826358 -  -4.2  -4.38203   CAGAGAATTAATAAA               TGCGCT CAC AGTGCA               CCCCTTATTGTTTTG  64 30
CH53_RS03560 NONE
CH53_RS03555 NONE
CH53_RS03550 NONE
CH53_RS03545 NONE
CH53_RS03540 NONE
CH53_RS03535  821050 ..  821065 -  -2.6  -4.03769   ATATAATGGAAATAA              CTAAAA AATA CTTTAG               CTTATACGGCTAGTT  55 58
CH53_RS03525  819699 ..  819711 -  -3.3  -4.99035   CTAGCCAGAGAAAAA                GCCCT TAA ACGGC                AAGAGTGAAGTGGCG  70 243
CH53_RS03520 NONE
CH53_RS03515  818610 ..  818629 -  -7.2  -2.61216   TCATTAATTAATTGA            TTGTGTCGC GCC GCG-CACAA            GATATAGATGCTGCG  59 111
CH53_RS03510  818175 ..  818188 -  -3.1  -3.65046   GTGTTATCCCAATAA               CGGTT ATCC AACCA                AACGGCACGGGCTAA  52 136
CH53_RS03505  816513 ..  816542 -  -5.7  -3.58269   TAAGTCACTTTCAAA       CTGGGTAATCGTGG CAT CCG-GATAACCCAG       CGCAGCTAGTTGTGC  58 254
CH53_RS03500  815357 ..  815367 -  -3.2  -4.20042   ATTAATACTCCAAAA                 TGAC TGC GCCA                 GCGTGACCATTTCCA  59 1
CH53_RS03495  814775 ..  814792 -  -5.5   -4.6759   AATACCTTAAGAAAA             CCAATCC GTTA GGGTTGG              TTTTTTTGTTTGTGG  75 147
CH53_RS03485 NONE
CH53_RS03480  812735 ..  812755 -  -9.8  -5.18726   GGGCTACAATAAAAA            TAAGGCAC AGACA GTGCCTTA            TTTTTTTGCCTGTTC 100 23
CH53_RS03460  808776 ..  808791 - -10.4  -5.96894   AGTTAAATAAAAAAA              GGCACC CGAA GGTGCC               TTTTTCACGTCAAAA 100 45
CH53_RS03450  807274 ..  807289 - -10.4  -4.85129   AGCAGATATGAAAAA              GGGAGC CGAA GCTCCC               TTAAGATTTTTGAAT  93 63
CH53_RS03445  806085 ..  806095 -  -3.2  -4.28361   TTAATGGCATCAAAA                 CACC GTA GATG                 GCATAACGCAAATGG  59 68
CH53_RS03440  805295 ..  805312 -  -8.4  -4.57073   CATCCTTGCGAAAAA             GCCGCT TATAAC AGCGGC              TTTTTTATTATCAGC  87 106
CH53_RS03430  802768 ..  802780 -  -3.3  -3.79747   GTACGCACCACTAAA                CGCTT AGA ACGCG                CTTTACGTCGGATTA  55 315
CH53_RS03420 NONE
CH53_RS03415 NONE
        rseB NONE
CH53_RS03405  798023 ..  798036 -  -3.1  -4.13767   TTTCGCACTTCAAAA               CTCCA ACCA TGGAA                TATTATAATCAATAA  56 494
CH53_RS03395 NONE
CH53_RS03390  794251 ..  794264 -  -6.7  -2.73364   TTGTCACCCGAATCA               CTGAC TTTT GTCAG                CTCATCGTGATTTAC  56 89
         rnc NONE
CH53_RS03380 NONE
        recO NONE
CH53_RS03370  790720 ..  790733 -  -2.3  -3.11222   GCCTAACCCCAAAAT               CGCCA TTAA CGACG                CGCTTCCCGCATTAA  43 17
        acpS  789904 ..  789921 -  -4.1  -5.42259   GCACTGGTAAAAAAA             CTGGTCT AAGG ATACCAG              AGGGGTATAATCCCC  82 449
        murQ  788002 ..  788012 -  -3.2  -3.31144   GTGTGAGTCTTACAA                 TGCA GCA CGCA                 AATAGCCGTTATGCT  48 9
CH53_RS03345  786706 ..  786716 -  -5.4  -2.98786   GACATTACAACCACA                 GTTG GCA CAAC                 GCAGGCTAGATAAGG  51 450
CH53_RS03335  785230 ..  785246 -  -2.9  -5.51046   GAAAGAGAGAAAAAA              GCAGC CCAACAT GCCGC              TATCGAAGCAGAACT  80 141
CH53_RS03325  779599 ..  779618 - -13.6  -5.03715   AGCATGCGTAAAAAA            GGGGCATC AACT GATGCCCC             TATTATCACAATCAA 100 52
CH53_RS03315 NONE
CH53_RS03310 NONE
CH53_RS03305 NONE
CH53_RS03300 NONE
CH53_RS03295  771708 ..  771727 -  -7.1  -5.42259   TTAGGGGTAAAAAAA            GCCCGCT GGTGGA AACGGGC             TTATTATCACGTCAA  93 114
CH53_RS03255  763039 ..  763052 -  -9.5  -5.50499   TCAGATGTAAAAAAA               CCCGC ATTC GCGGG                TTTTTATTACAGCTA 100 55
CH53_RS03250  761610 ..  761637 -   -15  -3.17392   TATGCCGTAAGGCAA        CCTGAATCAACG CCCC CGCTGATTCAGG         TACAATTACCGCTCA  91 84
CH53_RS03240 NONE
CH53_RS03235  758496 ..  758519 -  -8.9  -5.38047   CAGCCATATAAAAAA          GCCAGTC-GG CTAAT CCTGACTGGC          TTTTTTCATTGTTAA  95 43
CH53_RS03225  756375 ..  756392 -    -2  -3.12666   TCATAGCTAAAATTA             CCTGTT GGTGAA AACAAG              CCAGAATTTTGACAT  43 153
CH53_RS03220 NONE
CH53_RS03215  754590 ..  754600 -  -5.4  -3.35088   AAAGTCTGGAATTAA                 TGGT GAG ACCA                 TTCAATGCTACTGAT  56 11
CH53_RS03210  754169 ..  754179 -  -3.2  -3.33969   TAACCTATGTTACAA                 CTAC TTG GCAG                 TATGTTTGCTTTTGT  48 15
        iscA  753729 ..  753765 - -13.2  -3.45027   ATGGCTTAGCAAATA    TTATACAGCCCTCTTG TTATG CAAGAGAGCTGTATGA    AGCACAAGTACCTGA  95 61
        hscB  752987 ..  753003 -  -2.9  -3.08464   CCATCACTCACCCAA              GGCGTTA TCT CAACTCC              TTGGGTTCATTCACT  43 187
        hscA NONE
CH53_RS03190 NONE
CH53_RS03185  750500 ..  750515 -  -8.2  -5.28778   ATCAGGTAGAAAAAA              GGCCGC TTTC GCGACC               CTACAATACTTATTC  91 35
CH53_RS03180  748959 ..  748976 -  -6.2  -4.23615   AGCAGATCGAACAAA             GGGACG TCAATG CGCCCC              ATTGGTAGCTTACAA  71 132
CH53_RS03175  747986 ..  748005 - -11.4  -5.00616   TGGTGTGTCAAAAAA            GGGAGCCA GTTA CGGCTCCC             TTTCCTATATCGACC  95 64
CH53_RS03165 NONE
CH53_RS03160  736584 ..  736618 -  -3.8   -2.7682   TTTAATGATAAATAC     CAAAACCAATTAACCA TTG TTATTAATTAGTTTTA     TCAGTATTACTATTC  46 35
CH53_RS03155  733871 ..  733894 -  -4.4  -2.51535   TTACTACAAAATTAT          GCCGACCCCT GTAC AGTGGCCGCC           GATTATAAGTGCGCG  47 181
CH53_RS03150  733191 ..  733220 - -17.1   -3.9751   AAATAAATAATAGAA       CGCCCCGGGAGAG ATGT CTCCACCGGGGCG        CGGCATTGTACGAAT 100 135
CH53_RS03145 NONE
CH53_RS03140 NONE
CH53_RS03135  729913 ..  729930 -  -4.9  -4.39329   AGTTTATACAACAAA             GCAGTTT TTCA AAACTAC              AGTGGCTGTTTAGCT  68 73
CH53_RS03130  728691 ..  728706 -  -8.2  -3.75629   CAGGCGCAATGTAAA              GCGGGC TAAA ACCCGC               TTTTGTGCTGACCGA  70 61
        hisS NONE
CH53_RS03120 NONE
CH53_RS03115  725233 ..  725255 - -15.6  -4.27117   TTTTTAGAAGACAAA           CGGCCCCTGA ATC TCAGGAGCCG           CTTAAAACCCTTCGT 100 195
CH53_RS03110  723638 ..  723654 - -11.5  -4.64657   TTAAATGTGCAAAAA              GCGCGGA ATG CCCGCGC              TTTGCTGTTACTACT  93 36
CH53_RS03105  722600 ..  722623 -  -5.4  -5.00616   TTTCTCCTTAAAAAA          CTAC-ATCACC CCA AGTGATCGTAG          GAAGTAAATCCCCAG  79 2
CH53_RS03100  721952 ..  721972 -  -2.4  -4.26881   GCGCACAAAACCAAA            TTCGCGGG TTAAG CCGGCGCA            CCGAACGGCTCCAGC  57 410
CH53_RS03090  719158 ..  719168 -  -2.6   -4.9792   TATTCCACAGAAAAA                 TAAT AAA ATTA                 AATAGCTACCATAAT  68 177
        guaA  717494 ..  717513 - -11.4  -5.04222   CAACCAAAGTAAAAA            GCCCCCGA AAGA TCGGAGGC             TTAATTAATGTCACA  95 69
CH53_RS03080  715151 ..  715172 - -13.1  -2.57988   AAATTTATTAATTTA           TAAGGGAGC CTTA GCTCCCTTA            TTTTAATACACTATT  90 317
CH53_RS03065  712351 ..  712374 -  -7.4  -2.52464   CCGTTCGCCAACCTA          GCGCAGGCAA CCCC TTACCTGCGG           TACAAATTTCCTGGC  56 383
CH53_RS03055  710788 ..  710807 - -11.4  -2.95298   TGTATTCACCACACA            GGCCTCGC TGCT ACGAGGCC             GCTACAAACAGCATT  81 175
CH53_RS02945 NONE
CH53_RS02940 NONE
        pstB  675368 ..  675380 -  -6.2  -4.24342   TTGTTCATCAAGAAA                GGGG CAATT CCCC                TGACTATCTGGGTGA  71 371
CH53_RS21840  674081 ..  674102 -  -3.1  -3.89614   CTGAATTTGTACAAA           CTTTATC TGATTGTT GATAAAG            AAAATCAAAAAGCCA  54 331
         upp  670857 ..  670874 - -11.3  -5.81412   GTTATTCAAAAAAAA             GCCGACT ATCG AGTCGGC              TATCATCAGTTATTT 100 35
CH53_RS02905  669455 ..  669485 -  -3.2  -4.71061   ATCTAGAGCGAAAAA       CTGGCCGAAC CCACAATAACC GCGCGGCCAG       ATATCACTTTTTATT  67 50
CH53_RS02900  668583 ..  668599 -  -7.9  -3.09834   CACCCCATGATTGAA              CGCTGCG TAT CGAAGCG              AGGCCAATGGATGGG  65 88
CH53_RS02885  665082 ..  665097 - -10.4   -5.4477   AAAGTTGCAAAAAAA              GAGCGC TCAA GCGCTC               TTTTTTATTCGTCAT 100 177
CH53_RS02870 NONE
CH53_RS02865  661858 ..  661871 -  -9.5  -3.54741   TATGACGGGTTTAAA               GGGGC CGAA GCCCC                TTTGGTTTTATTTGG  77 33
CH53_RS02860  660843 ..  660865 - -16.4   -3.0438   GAGTAAGAACAATGA           GGGGAGATAG CAG CTATCTCCCC           TGCGCCAGACAAACG 100 56
CH53_RS02855  659592 ..  659614 -  -4.8  -4.15044   CTGCCTTGCAATAAA           TGCCGGCA GCTAGCG TGCCGGTA           AGAGGAAAGTGGTCT  65 120
CH53_RS02850 NONE
CH53_RS02845  657112 ..  657124 -  -2.7  -4.90381   TTTAAGACAATAAAA                GATAA CTG TCATC                AACCCTCTGCCATCC  68 24
CH53_RS02840  656347 ..  656362 -  -6.8  -4.71426   TTCCTATCAACAAAA              CAGGCC AATT AGCCTG               TTTTCATTATCATTA  81 163
CH53_RS02835  655512 ..  655531 - -13.6  -3.64103   GACTCACATCTCAAA            CGAAGGGG CCAG CCCCTTCG             TCAGGGTGAATTACC  95 36
CH53_RS02800  647983 ..  648003 -  -4.7  -3.09834   CACCCTATTATTTAA            TAGCGACCA AAC TATTCGCTA            TCTGTAAGGCTACTC  51 35
CH53_RS02790 NONE
CH53_RS02785 NONE
CH53_RS02780 NONE
        napB  642912 ..  642924 -  -9.1  -3.55444   CGGTTATTGGCCAAA                GCCAG GGG CTGGC                TGGAAGCTGTTACCG  74 1
CH53_RS02770  642209 ..  642237 - -16.1  -5.25906   ATAAAGCAATAAAAA        TGCCCTGTCGACA CAA CGTCAACAGGGCA        TCTCAACAGCGAAAA 100 60
CH53_RS02765 NONE
CH53_RS02760 NONE
CH53_RS02755  640963 ..  640981 -  -3.8  -4.17958   AATAGGGGGAATAAA             TGCCGC TAATAAC ACGGCA             ATATCGGTAAGAAAG  62 45
CH53_RS02745  638307 ..  638320 -  -9.5  -4.93365   GCCTATAAGCAAAAA               CCCGC CGAA GCGGG                TTGAGGTAAGTAATT  93 91
CH53_RS02730  635939 ..  635959 -  -3.9    -4.053   ACCACGGTAGACAAA            GTCAAAACG ATG CGTGATGAC            ACTCGTGTCACTCTG  60 320
CH53_RS02720  634713 ..  634726 -  -5.2  -3.41988   CGCCAGGGAAGAAGA               GGCG GTTACT CGCC                TTTAGCTCGCCAGAT  54 17
CH53_RS02715  633394 ..  633413 -  -6.4  -4.18018   TTTGCCCATTGAAAA            CCCGGC-CA ACC TGCACCGGG            TGATAGAAAAGACTT  71 91
CH53_RS02710 NONE
CH53_RS02705 NONE
        cysW NONE
CH53_RS02695  629278 ..  629290 -  -6.3  -4.08064   AAGCTCTGTTCAAAA                TGGTT TAC AACCA                ATTTATCGCTCGTTA  69 107
        cysM  628179 ..  628228 - -16.7  -3.58536   AAAGGGAGGCGCAAA TATCCTATCAAGCCCAACTG-ACA GTT TGTTCAGATGGGCTTGATAGGCCA GGGTAACCAGCAGTC 100 44
CH53_RS02685  625908 ..  625919 -  -4.4  -3.31792   GTATCATTCCGACAA                GCTA GAAA TAGC                 GTTAAAACAGCGTCA  52 38
CH53_RS02680 NONE
CH53_RS02675 NONE
CH53_RS02670  620888 ..  620898 -  -2.4  -3.82097   CTCAAACTCACTAAA                 CCGG GAT CTGG                 TAATATTCGTCTTTA  51 10
CH53_RS02665  619500 ..  619510 -    -4  -3.37245   TCAGCCGAATAGCAA                 TCTT GTA AAGA                 AGATTAAGAAATTCA  50 331
CH53_RS02635 NONE
CH53_RS02630  609811 ..  609828 -  -8.3  -4.90302   TACGAATAAAATAAA             CGGCGCC TAAG GGTGCCG              TTTTTGTTTTCTGCT  90 76
CH53_RS02600  603462 ..  603478 - -10.8   -5.5762   ATCAAAGATAAAAAA              CCCCCG GCATG CGGGGG              TTCGGGTTAATTCGA 100 61
        ligA NONE
CH53_RS02590  600840 ..  600851 -  -5.8  -2.62184   GCTCTTCTGACAGCA                GTGC GGCG GCAC                 AAATCAAATCCATTA  51 364
CH53_RS02565  599305 ..  599315 -  -5.4  -4.21194   CTGGACCACTGAAAA                 CGTT CAC AACG                 CGATTCAGGGCACGG  66 308
CH53_RS02555 NONE
CH53_RS02550 NONE
CH53_RS02545  597194 ..  597206 -  -4.1  -2.76189   CAACTGAGCTAACGA                CCCAT TAT ATAGG                TTTATTCGACATTTT  46 209
CH53_RS02540  597048 ..  597058 -  -6.8  -2.55074   TCGAACCTGAACGCA                 GGGT CTC ACCC                 ACACGATTTCGTGCA  56 88
CH53_RS02530  593365 ..  593375 -  -4.6  -2.94825   TTAGGCGAACGAAAC                 CGCC ATG GGCA                 TTACTGGGATGGACA  49 236
CH53_RS02510  590326 ..  590359 -  -7.5  -5.03405   AAGATCACATAAAAA     CGTTTCAGCAACGGCA AAA TACCGCTGCTG-AAGG     TGAAAAATGACGTAA  86 45
         glk  589188 ..  589205 - -11.3  -5.12617   CAATGATGTAAAAAA             GCAGAGC CTTG GCTCTGC              TTTCATATTTCACCG  95 57
CH53_RS02480  582918 ..  582930 -  -2.7  -3.29508   ATAATAAATATCTAA                CTCAT CGG ATAAG                TTACTAAGAATCAAA  46 29
CH53_RS02475  581487 ..  581529 -  -6.3  -2.66255   TTTGAACATAAGGTA CTTTATTCTGACCGGACAGC TTGA GTCG-CCGGTCAGAATAGGG AGTTAGCTATTTAGT  54 58
CH53_RS02470  580842 ..  580857 - -11.8  -3.91144   CTGACATCGTATAAA              GGGCGC ATTT GCGCCC               TTTATCATTTTCCAG  91 30
CH53_RS02435  573013 ..  573059 -  -8.2  -6.06723   TCGGGCAAAAAAAAA CCTAAACGCACTCCGCATCGC GACCTA GCGATAC-AAGTACATTCAGG TTTTGCCTGCCGAAG 100 102
CH53_RS02430 NONE
CH53_RS02425  569602 ..  569614 -  -3.4   -4.7497   TGCAGTGAGGAAAAA                CAGT TGAGT ACTG                TTCATCTCACTGCAA  67 57
CH53_RS02420  568029 ..  568068 -  -6.6  -3.40191   TGGAGAATAGAGTAA CAGCT-TA-CGTGGTGCC AGTTAA AGCACCACGTTATAGCCG  TATTATCGGCAATGC  62 50
CH53_RS02415  566953 ..  566974 -  -3.7  -2.87527   GACGCATGATCAAAC           CGAAGCA TTATCATT TGCCTCG            CAAGTCGCGGTAATG  43 507
CH53_RS02395  562204 ..  562227 -  -8.1  -4.45693   TAATAGAAATAGAAA          GGGCCGCAT CGTAAC ATGTGGCCC           TTTTACTGCTTGCCA  80 80
CH53_RS02375  556438 ..  556450 -  -3.4  -3.45366   TGTTTAATTAATGAA                GTGT TAACC ACAC                CCTAATCAGTGAGGT  50 31
CH53_RS02370 NONE
CH53_RS02365 NONE
CH53_RS02360 NONE
CH53_RS02355  552761 ..  552786 - -15.5  -5.34555   CTAGACGATAAAAAA         GGCGAGTTAGC TACT GCCAACTCGCC          TCAGATAAAATCAGC 100 58
CH53_RS02350  551186 ..  551202 -  -2.3  -2.72511   GCCACGCGGTTAAAC              CGTAA TATTTAT TTACG              TGTCATTATACTGAT  40 17
CH53_RS02345  549928 ..  549939 -    -3  -3.34962   GTCCACACGCCATAA                TCAT GCAT ATGA                 CTACCCTATTAATTA  46 38
CH53_RS02340  548438 ..  548469 - -14.8  -4.62168   ATTTAAAGCAGAAAA      TAATGCCATTATAA ATAT TTATAATGGCATTA       TTTGTAGGGGTATCC 100 82
CH53_RS02335 NONE
CH53_RS02330  546944 ..  546958 -  -7.1   -4.9448   ACCGACCAAAGAAAA               GGAGC ACAAG GCTCC               TTTAGGTCAAGCAAC  85 63
CH53_RS02325  545215 ..  545234 - -10.6  -4.29227   TCAACCATCAATAAA            GCGCCCTG TTCA CTGGGCGC             GTATTGGGTATAGCA  90 56
CH53_RS02315 NONE
CH53_RS02310  540608 ..  540623 -  -2.6  -3.64703   GCCCTCGGACTGAAA              CTGTTT TCAG AAACAA               TGCTGGAAAACCGTA  51 221
CH53_RS02295  539048 ..  539066 -    -6  -3.44848   GTTGTTTATCAAATA             GATAAACC TTT GGTTAATC             GAGTGATTTATTTTC  62 125
CH53_RS02290 NONE
CH53_RS02285  537922 ..  537935 -  -5.9  -4.22338   ACTAGAATGCCAAAA               CCCGC CGGA GCGAG                TTAGTTTTTATCTAC  67 26
CH53_RS02280  536546 ..  536565 - -11.4  -5.28176   TTTAGGCATAAAAAA            GCCCCAGC GGAT GCTGAGGC             TAGATTTTGTGAATA 100 121
CH53_RS02275  536233 ..  536262 -  -9.2  -2.79518   GGAAAATGTTGAAAC       CCTTGCCGGGCG TGGCTT CGCGGGGCAAGG        TTATTTTTGGCTAAC  68 98
CH53_RS21835  533934 ..  533947 -  -5.3  -4.84359   CCATGTTGATAAAAA               TTCCA TCCG TGGAA                CTTATAACCATGCGC  78 125
CH53_RS02240 NONE
CH53_RS02235 NONE
CH53_RS02230 NONE
CH53_RS02225 NONE
CH53_RS02220 NONE
CH53_RS02215  526122 ..  526145 -  -5.4  -3.07113   CATCAGCTTATTGAA          TGAAAAATGA GATT TCATTATTCA           GCCTCCGATGCAGCA  53 19
CH53_RS02210 NONE
CH53_RS02205 NONE
CH53_RS02200 NONE
CH53_RS02195  522988 ..  523001 -  -9.5  -5.63517   CTGGCAAACAAAAAA               GCGCC TTTC GGCGC                TTTTTTATTATTCTT 100 55
CH53_RS02185  520900 ..  520920 - -12.6  -5.05037   TAATACAAAAATAAA            CGCGAAGC AAAAA GCTTCGCG            TTGGGGAGAGATTCA 100 73
CH53_RS02180 NONE
        fadJ  516720 ..  516739 -    -5  -3.55444   GCTGTACCGCCGAAA            CCTTTACC CATA GGCAAAGA             AACTTCATAACGATA  56 401
CH53_RS02170  516113 ..  516143 - -14.1  -4.96848   GGTTTGAGAGAAAAA      CAA-CGGCGCGACA GAGA TGCCGCGCCGATTG       GGTATTCACTAACAC 100 45
CH53_RS02160  514179 ..  514210 - -15.4  -4.09117   TGTAGTCATAAACAA      TCTGTCAGTATGAT ATTT ATCACACTGACAGA       CTTTATAAGCAGAGA 100 45
CH53_RS02155 NONE
        mepA NONE
CH53_RS02145  511352 ..  511362 -  -2.4  -3.01712   CTTGGGTCCGTAAGA                 GCGG TAT CGGC                 AGCGGCATTCAGGCT  42 65
CH53_RS02140  510770 ..  510783 -  -3.8  -4.46215   TATATCCAAAAATAA               TGGC GTTGCA GCCA                GGCGGTAAGCTACAC  64 35
CH53_RS02135  510222 ..  510266 -   -10  -3.52111   TCAAAATCACTAGAA TCGCAGAGGTGAAGCCAAGT AACGG ATCTGGCTAAACCCCTGCGA CTTCAGCAATGGAAG  79 41
CH53_RS02125  506648 ..  506669 - -13.7  -5.12068   CATAGCGAATAAAAA           GGCCCGCGA TTAC TCGCAGGCC            TTAGTAACTCAATAT 100 69
CH53_RS02120  505335 ..  505349 -  -3.6  -3.65314   GTTAAGTTGGAAGAA               TATCAG CCG CTAATA               ATATTCCTACCCGCT  52 13
CH53_RS02110  502837 ..  502853 -  -2.9  -4.03204   CAGGAAATCTACAAA              TGGCCAG GGG CTGACAA              AGAGAGATTACGTTA  55 113
CH53_RS02105  501517 ..  501530 -  -2.3  -5.27779   CTGAAGACCAAAAAA               CTCTG CAAC CAGTG                ATTAACCCGCTGATC  76 186
CH53_RS02095  499933 ..  499953 -  -4.7  -2.85874   GAAATAGATTAATCA            CAGCAAC GCAAAAG GTTGCCG            TAGTTATGCCAACAG  48 46
CH53_RS02090 NONE
CH53_RS02085 NONE
CH53_RS02080  496554 ..  496595 - -13.9  -5.33921   AAATCAATCAAAAAA CGCACGACCAACAGTCAGAC TGA GTCAAACTGTTGGT-GTGCA GTTCCCTGTGAACTT 100 56
CH53_RS02070  493832 ..  493860 -  -8.8  -4.47707   GCGCAGTAAAAATAA        GGTAGCGGCGTA TAGGG TGCGCTGCTACC        CCATACATTTCTTTT  85 39
CH53_RS02060  491620 ..  491637 -  -2.7  -3.99985   TATATACCCAAAGAA             GTTGG AGTTGCAG CCAAC              ACCCCTGCAGCGTCA  55 406
CH53_RS02055  490378 ..  490395 -  -8.4  -4.35044   CGATTGAAATAGAAA             GGCGGT AAAAAA ACCGCC              TGACAATCAATAAAT  85 58
CH53_RS02050  489303 ..  489316 -  -6.7  -2.84634   TCGGACATCAGTATA               GTTGC TCCT GCAAC                AGGCGCTCCGCCGTT  57 4
        truA NONE
CH53_RS02040  487560 ..  487572 -  -3.3  -2.64925   ACACGCCATGACAAC                GTGGC TAA GGCAC                TGGAACTCGGGTTGT  43 135
CH53_RS02035  486500 ..  486530 -   -14  -3.94067   GACCATACACAACAA       CCGGGCATCACCTT ATC AGGGTGATGCCCGC       GTGAGTAATCAGGCT 100 34
CH53_RS02030 NONE
CH53_RS02025  484120 ..  484152 - -12.2  -4.16182   CCACGACAAATTAAA     GTGCGGCGATT-TTA AAAA CAACAATCGCCGCAC      AAACTTAGCTCAACA  95 80
CH53_RS02020  483514 ..  483527 -  -2.3  -2.57132   TCTTTTCCTCATAAG               CCGCT CCGA ATCGG                TAATTGATTCGGTAA  39 5
CH53_RS02015  481841 ..  481870 -  -7.2  -5.60689   GTAGATAACAAAAAA      GGTGC-ACC-GCGC CGGA ACGCTGGTTGCACC       TTTTTGATTCATGCT 100 132
CH53_RS02010  481012 ..  481022 -  -3.2  -3.46102   TACGCAAAAATCGAA                 TACG GAA CGCA                 TCCCCTGACACACCT  50 122
CH53_RS02005 NONE
CH53_RS02000 NONE
CH53_RS01995 NONE
CH53_RS01990  477689 ..  477725 -  -6.6  -3.17075   CTCGGCTTAATCGAA    TTGCTGCGGGATAG ATAAAATCG CTATCCCGCAGAGA    TGTTACTTTAGTGCG  60 28
CH53_RS01980  475433 ..  475461 -  -4.5  -4.15748   TTATCGCAAAAAACA        GCGCCGACACGAC AAA ATAATATCAGCGC        AAGGTGAACTACAAT  63 53
CH53_RS01975  474714 ..  474726 -  -4.9  -3.40639   AATTTGAGTAACTAA                CTATT TAT AATAG                TTTTTTTAAATCCAA  54 17
CH53_RS01970  474024 ..  474039 - -10.4  -4.07859   GTAAGAAACACGAAA              GCCCCT GAAG AGGGGC               TTTTTTATGCTTAAG  86 47
CH53_RS01950  470157 ..  470171 -  -8.5  -5.80364   ACGCCAACAAAAAAA               CCGCC ATATA GGCGG               TTTCTCTGTGCTGGT 100 504
CH53_RS01935  465485 ..  465495 -  -4.6  -2.52946   TGCTGGCATAAAACG                 CCCC TTA GAGG                 TCATCAAGAAATGTT  47 19
CH53_RS01930 NONE
CH53_RS01925  464096 ..  464113 - -12.7  -4.39166   TTCCAGACAGTAAAA             GAGCGCC ATCA GGCGCTC              TCAGTGAAGATGTTT 100 58
CH53_RS01920  462043 ..  462064 -  -9.4  -3.21872   CGCAAACACAGCTAA           CGCCCCTG TAACGC CAAGGGCG            AAGGATAATCAGAAT  73 34
CH53_RS01910  460572 ..  460594 - -13.5  -2.64695   CCACCAGTAATTAAT           CAGGGCTTG TATAG CAAGCCCTG           TTTTATTTATGCAGT  91 43
CH53_RS01900  457497 ..  457514 -  -8.4  -5.98675   GATAAAAACAAAAAA             GCCCCT AAAATA AGGGGC              TTATGATATTTTAAT 100 54
CH53_RS01895  456311 ..  456332 - -10.2  -3.15544   GCTCATCGGGATTAA           TGAGCCTC ATGGTG GAGGCTCA            CCCTACGGGCTAGCA  75 51
CH53_RS01890 NONE
CH53_RS01885 NONE
CH53_RS01880 NONE
CH53_RS01875  451601 ..  451632 -  -2.2  -5.26875   GCGTTAATCAAAAAA      TCTGGCTCTTACTG AAAA CAGCAAGAGCGTCA       ATGCTGCTACCAGCG  73 32
CH53_RS01870  448771 ..  448783 -  -4.8  -3.24137   AACCAGCTCATAATA                CTGC CTCCC GCAG                ATTCTCAACGCGCGC  53 5
CH53_RS01865 NONE
CH53_RS01860 NONE
CH53_RS01855 NONE
CH53_RS01850 NONE
CH53_RS01845  444500 ..  444518 -    -3  -2.98813   AGGGGAGAAGAATTA             GCCAAGGT AAT AGCATGGC             GTTTTGTGTCCCTAA  43 41
CH53_RS01840 NONE
CH53_RS01835  441471 ..  441508 -  -6.2  -5.45726   CACAGGGTAAAAAAA   CAAAACCCCCTGCGCG TTTCGG CTAACAGGGGGTTTGG    GAACAGGCTTAACAA  91 45
CH53_RS21830  440582 ..  440611 -  -9.6  -2.82635   ATTGTTATCATTACA       TTTATTATGTGA TTAAAG TCACATAATAAA        CACTATGCATAATTT  71 28
CH53_RS01825  439453 ..  439470 -  -8.4  -3.57144   CGCGTGATGCCTAAA             TCCGCC GTCCAT GGCGGA              TTTCCCTTGCTACAC  72 519
CH53_RS01805  435723 ..  435740 -  -2.7  -4.66318   ATCATGTTAAGAAAA             CATGTTA CCGG TAACGTG              ATCGACCTATCATTG  65 220
CH53_RS01800  434541 ..  434554 -  -3.9  -3.90856   AATGCCGCAAGCAAA               TAAAC AGAA GTTTA                TTCTCTGGTGTTAAT  57 88
CH53_RS01795  433109 ..  433145 -    -6  -3.85698   TTCTCCGGTGATAAA   TAGCGGGGCAT-AA-TGG TTA CCAACCGATACCCCGCTA   CAGCTTAAGCGCGTT  66 30
CH53_RS01790 NONE
CH53_RS01785  430722 ..  430751 -  -7.2  -2.90309   TGGTAAATAATATGA       GGGGAAAAGG-GT TACTG ACGCCCCTTCCCC       GGTTTTATGACTAAA  60 36
CH53_RS01780  430246 ..  430259 -  -9.5  -3.94853   CAATTGAAGAGTAAA               GGGGC CGCA GCCCC                TGATTATGGTTTCAG  83 59
CH53_RS01775  428693 ..  428713 -  -4.5  -2.57931   CTCAGGTGTCACAAT            CCGCCCACA TAA CGAGTGCGG            TTAATTACGGCATTT  47 51
CH53_RS01770  426863 ..  426877 -  -2.1  -2.53876   GTTTACGGCAAGCCA              GCGTCA TAAT TG-CGC               CACCTGTTGCACCAG  39 14
CH53_RS01765 NONE
CH53_RS01760 NONE
CH53_RS01755  424225 ..  424239 -  -2.1  -3.13164   GGGCCAATCATTCAA              CTGTGC CATA GCAC-G               TCCAACTGTTCGGTT  43 7
CH53_RS01750 NONE
CH53_RS01745  422224 ..  422245 -  -5.1  -2.53213   CAATGGCGCAACTTA           CGAGCCAAA CAGT TTTGGCCTG            TTTCAGGAGCAACCT  48 356
CH53_RS01735  419998 ..  420025 -   -15   -4.4078   CCTCCCCAACTAAAA        GGGCGCATATCCT GTC AGGA-ATGCGCCC        TTTTTTAATCAAACA 100 177
CH53_RS01725  417296 ..  417318 -  -3.5  -5.61689   AAAATTAATAAAAAA          GACGC-ATAT TTTA ATATTGCGCC           TTTATATTATCATCG  83 56
CH53_RS01720 NONE
CH53_RS01715 NONE
CH53_RS01710 NONE
CH53_RS01705  409275 ..  409296 -  -7.3  -4.82154   AACCCACATTAAAAA           TACCCATTC AACT GAGTGGGTA            TCTAAATTATGTCGC  83 52
CH53_RS01675  400534 ..  400551 - -11.3   -5.3236   ATAAGCCATAAAAAA             GCCAGCT CGTA AGCTGGC              TCTTGTTTTCAACAA 100 45
CH53_RS01670  397135 ..  397193 -  -8.9  -3.12449   CTTTATCAACAGAGA TACTCTCAAGCCCGGTGTTACTCAGCA GCCTT TGCTCAGCAACACCGGGCTTATTTCTA TCCATTCGCCCATTC  70 422
CH53_RS01650  390410 ..  390427 - -10.5  -5.60993   GCTGGCACAAAAAAA             CGCGGCC AAGT GACCGCG              TTATGCCTCAGAACT 100 57
CH53_RS01645  390041 ..  390065 - -14.4  -5.73978   ACCACAAACAAAAAA          GCCCAAGCTT GCAAT AAGCTTGGGC          TTTAAATTTGGCGGA 100 34
CH53_RS01635 NONE
CH53_RS01630 NONE
CH53_RS01625  384980 ..  384993 -  -6.7  -3.76373   GGTTGAATATTGAAA               TGAGG CCCA CCTCA                ATTTCAACTAAATTC  66 184
CH53_RS01620  383480 ..  383493 -  -4.5  -4.53034   CCGATATAAGTAAAA               GCC-GC AAG GCTGGC               TTTACCGGCTATCGC  71 402
CH53_RS01605  380719 ..  380735 -  -7.2  -4.81249   CTTTAAATGGAAAAA              GACGCC ATCAA GGCGCC              TTGAGAAAAACGCAT  83 53
CH53_RS01600  379692 ..  379716 -  -4.4  -2.63089   TATCAGGTCAAAGAG         GGCGC-ATAAT GACT ATTATTACGCC          TGCCGGAGCAGGCGT  47 311
CH53_RS01595  378817 ..  378831 -    -7  -3.20028   TGGAGCAGAAAATGA               CGGCGG TGA CTGCCG               GTAAAGGTGCTGTCC  60 375
CH53_RS01585  377489 ..  377518 -  -8.5  -3.44998   CATGGATCAATAACA       CCGCTGCCGCG TTTAAATT CGCAGCAGCCG        GATAGCACTCATATC  72 34
CH53_RS01575  375732 ..  375757 - -16.9  -3.44553   GGAAAAAGGTCACAA         TGGCAGGCGGC TGAA GCCACCTGCCA          TCAGGAAAATCAGTT 100 35
CH53_RS01570  372913 ..  372928 -  -4.6  -2.60194   ACCCTGGCAATTAAC              TCGCGT CACA ACGCGC               TGTTAATTGGCGAAC  47 5
CH53_RS01565  371705 ..  371727 -  -2.6  -3.68798   CGCGAAAAGAATTAA           CGTGATAGCC CAA GGTTACTACG           ACGTTAATACTTAAA  50 41
CH53_RS01560  370828 ..  370852 - -14.4   -3.1458   CTGAAAAAGCATACA          GCCCAAGCTT GCAAT AAGCTTGGGC          TTTAGATTTGGCGAA  95 282
CH53_RS01510  359060 ..  359097 -  -5.6  -3.14931   CTTATTGGTGATTAA   CTACCCCTCAATTGTT ACAGTA AAAAAATGAGGGGAAG    ACCAAGATAATAATC  54 213
CH53_RS01505 NONE
CH53_RS01500  356543 ..  356553 -    -4  -3.16921   ATCAAGCGTTATCAA                 CAAA TTA TTTG                 TATTTCGCTTCATAA  48 94
CH53_RS01495  356356 ..  356380 -   -13   -5.1417   GTATAAAAGCAAAAA          CCCGTTATCT TATTC AGATAACGGG          TTTTTAATTGGTGCC 100 34
CH53_RS01480  351764 ..  351779 -  -3.2  -4.50627   CATTCACGAAATAAA              TAGTGC GGTT GCACAA               TTGGACACCATGGTG  66 215
CH53_RS01455  346649 ..  346664 -  -5.4  -6.04324   CTAAAAAACAAAAAA              TCTCAC CAAA GCGAGA               TTTTAAATTATGATA 100 67
CH53_RS01450 NONE
CH53_RS01445 NONE
CH53_RS01440  345036 ..  345048 -  -2.7  -3.44801   CCTGATAAAAAATGA                GATAT CCA ACATC                ATTACCTGTCATGGT  48 299
CH53_RS01435  344320 ..  344351 -  -7.3  -4.28254   TGTTAACACTTAAAA      TGCAGGTTTCGCT GTTTTT ACCGTAACCTGCA       CCACATCACCGTCTT  76 157
CH53_RS01430  342787 ..  342800 -  -4.5  -2.62667   CTAAGGGTTAAACAG               CCGCT TGCA AACGG                AATTGATTCAGAACC  47 4
CH53_RS01425 NONE
CH53_RS01420  342004 ..  342051 -  -9.2  -2.57944   CACCACCACATTAAG CTACTGTAGGTCAGGGACCAGGC ATC GCCCGGCCCCC-AGCTATAATAG TAAGTGACGTCAGCG  67 42
CH53_RS01415  340539 ..  340552 -  -9.5  -5.68438   TTAGGAAATAAAAAA               CCCGC CGGA GCGGG                TTATATCGATATGCT 100 74
CH53_RS01410 NONE
CH53_RS01405 NONE
CH53_RS01400  337420 ..  337431 -  -3.6  -2.78384   TCTGTTGTCATCACA                CCAC CTTA GCGG                 GCGTTTCACTGGTAA  44 9
CH53_RS01395 NONE
CH53_RS01390 NONE
CH53_RS01385  335203 ..  335217 -  -2.1  -3.19602   TTTTGCATAGTAATA               CCTCA CCAAT TAAGG               CGTTTTAAATTAATA  43 53
CH53_RS21825 NONE
CH53_RS01375  333959 ..  334005 - -10.1  -2.80816   CTGTTACTCAGTAGA GCCAATATGAGTAGGCCGGGCT ATTA AGCCCGGCTT-CGCGCACTGGC TCTATTTTACGACCG  73 27
CH53_RS01370 NONE
CH53_RS01365  331338 ..  331371 - -12.5  -2.97779   ATGAAAATCAATAAC     GGACTAACCGCCTCA ACGG TTAAGCGGTTAGCCC      CGATTCATTTGCGCC  84 19
CH53_RS01360  329790 ..  329821 -  -7.4  -3.54489   GCAAGGGGAAATTAA      TGGAAAGGCCAA AATTATAA TCAGCCTTTCCA       ACATTACGGGATTAT  66 48
CH53_RS01355  328763 ..  328793 - -12.7  -3.05579   CAACAAAAGACTACA      CGCACTA-CCTGCC AGAA GACAGGATAGTGCG       ACTCATACATAGTTT  84 40
CH53_RS01350  328098 ..  328115 -  -5.5   -4.6759   AATACCTTAAGAAAA             CCAATCC GTTA GGGTTGG              TTTTTTTGTTTGTGG  75 135
CH53_RS01330  324624 ..  324653 - -18.1  -3.57144   TTCGGGACGCCGAAA       TAAAAAACGCCGC TTAT GCGGCGTTTTTTA        TTGGCTAGCGTCACA 100 50
CH53_RS01315  321253 ..  321264 -  -5.8  -3.10732   ATATCAACGGCAAGA                CAGC CCGC GCTG                 TAATAGAAAATCAAT  54 40
CH53_RS01310  319814 ..  319836 -  -3.4  -2.56164   GCTGCAACCATTAAC           GGATAAGC ACCCATA GCTTAGCC           TTGATAATGGGTGTG  42 48
CH53_RS01305  319542 ..  319562 -  -3.4  -4.87273   AATATCTGATAAAAA           TGCGTCAAT CACA ATTGACG-A            TTTTTTATATGAACG  70 42
CH53_RS01300  318275 ..  318293 -  -6.6  -3.46534   GAAGTCCATCAAAGA             CTCAGTGC TGT GCACCGTG             AACAACGGGTGATCA  61 487
CH53_RS01255  307439 ..  307490 -  -8.2  -2.86124   TTTATTCAAATAGCA TCATGCAT-CTAGCACGACTTATCA CTG TGATAAGCCGTGCTTGTATGTATAC ATCATAATGTTTGAA  62 45
CH53_RS01250  306131 ..  306160 -  -2.2  -3.37522   AGCTTACTCAAGTAA      GTGATTCGGGTGCG TGAG CGCAGCC-AA-CAC       CCCTGTAGCTTCAAA  45 423
CH53_RS01240  302906 ..  302934 - -11.2  -4.36914   TGGTTGGGTATAAAA       CAGTTAAGGGCCA TTTC TGGCCCTTAA-TG        TATTGAAAGATGGCG  93 43
CH53_RS01225  300046 ..  300075 - -12.2  -3.68073   GACCTGACGTAATAA       TACCGCCCGTTC TATCAC GAAGGGGCGGTA        TCCGCTTCCAGCTTA  89 10
CH53_RS01175  289336 ..  289348 -  -3.3  -4.02139   TGAAATTGAAAAATA                TACCG GCC CGGTG                CTGAAAAACACCGCT  58 231
CH53_RS01155 NONE
        fruK NONE
CH53_RS01145  280820 ..  280836 -  -6.5  -6.15717   TAAACATAAAAAAAA              CCGGC ACATAAG GCCGG              TTTTTTATGGGTGAA 100 57
CH53_RS01130  278165 ..  278175 -    -4  -3.31625   GAAATTAAGCAGTAA                 GAAT ACT ATTC                 ATTATCATCTGAATA  50 20
CH53_RS01125  276763 ..  276786 -  -8.9  -4.62085   ACCCTTAAAAAATAA          GGCGGGATT GTAACA AATCCCACC           GACTCGGATAGTAAC  88 217
CH53_RS01120  275149 ..  275168 - -12.2  -5.98781   CACAACCAAAAAAAA            GGGCGATA AGAT TATCGCCC             TGCCATCACTATGGC 100 64
CH53_RS01115  272341 ..  272363 - -11.4  -2.79684   GCAGCAAGTGAATGA           CAAATCGGTC GGG AACCGATTTG           AACAGCATTCATGCT  80 158
CH53_RS01100  269123 ..  269133 -  -2.6  -4.63527   TCATCATCCCAAAAA                 TAAA GTT TTTA                 ATTCAAGCTACCCAA  62 99
CH53_RS01095  268292 ..  268305 -  -3.1  -3.11687   CTAATCATGATTTAA               CGCCTG CCA CAGG-G               ATAACTGAACCGGCG  46 1
CH53_RS01090 NONE
CH53_RS01085  266251 ..  266267 -    -3  -3.38966   AAAAGCCACCCACAA              CATGAT CTGGC ATCACG              GCAGATGGCGGGTTT  47 388
CH53_RS01070  262350 ..  262369 - -12.2  -4.19817   CGTATTCAGCTAAAA            GGGCTACT TTTC AGTAGCCC             TTTCTCTTATTAATC  95 57
CH53_RS01025  251921 ..  251939 -  -2.4  -2.69073   ATCCATAACAACCTA             CCTCACGA TTC TCATAAGA             CGAAAAGTGGCATAG  40 117
CH53_RS01020  251061 ..  251080 -  -9.4  -2.72829   GATAGTGCGCTAAAT            TTGTATCC AAGG GGATACAA             CACCTTTGCCCTGCT  70 371
CH53_RS01015  249802 ..  249832 -    -9  -5.55769   CGGCACAATAAAAAA       CAGGAACAGGAAGA TAA CCTCCCTGCCCCTA       CCCTTGTTCATTTTA 100 102
        potG NONE
CH53_RS01005 NONE
CH53_RS01000  246723 ..  246746 - -15.4  -3.30124   TGTTATCTCTGACAA          TAACGCCGCT GGTC AGCGGCGTTA           AAGAAAGGTGAAGCC 100 59
CH53_RS00995  246180 ..  246198 -  -3.8  -3.92324   TTGTGCAACACTAAA             CACTCATT TTG ACTGAGCG             AAATAGCGGTGCCAG  57 10
        rumB  244668 ..  244678 -  -2.4  -3.66908   GTGGCTGAAAACCAA                 CCCG AAC CTGG                 CATCAGTTGGCGAAC  50 310
CH53_RS00965  238917 ..  238944 - -14.3  -2.53581   GACAGCCTCAACTGA        GTTAAGGCCCA TAACCG TGGGCCTTAAC         AATCCGCACTTGCAC  93 251
CH53_RS00895  221449 ..  221459 -  -6.8  -3.95424   ATGAGCAACAGCAAA                 CGCT GGC AGCG                 CTGACTTTCAGTCTG  66 507
CH53_RS00885 NONE
CH53_RS00880  217595 ..  217616 - -10.9  -4.21908   GATTACGATTCAAAA           TGCCAGCCA ACGA TGACTGGCA            TTTTTATTTCTAATA  90 119
        clpS NONE
        clpA  214144 ..  214170 - -10.2  -5.45802   TGTGGAAAACAAAAA         GGACGATAAGTT TAT AGCTTATCGCCC         TTTTTTATTGCCCGA 100 99
CH53_RS00835  206611 ..  206630 - -11.4  -3.37796   TGGTATGAGTGACAA            CGCCGAGA ACCC TCCCGGCG             TTGAAACTGTATGAA  85 86
CH53_RS00830  202824 ..  202840 - -15.1  -3.28712   CGCTTCTTTGCATAA              GGGCCGC AAA GCGGCCC              TGTCTATGTTAACAG 100 56
        lolA NONE
CH53_RS00820  200775 ..  200811 - -13.1  -2.81133   CAGCCACTTACCATA    TAGCGCTAACCTTACCG CAA CGGCAAGACTAGCGGTA    GCGTTTTATCGGGCT  90 17
CH53_RS00815  199223 ..  199236 -  -9.5  -5.77571   ACCAAAAAAGAAAAA               GCGCC CTAA GGCGC                TTTCTGCATAGTGGA 100 63
CH53_RS00810  197874 ..  197901 - -11.3  -2.89191   GCATATCCCTAGATA        CCGCCAGCGTGG GTTAT CC-CACTGGCGG        TATTTTTTTGGCTGT  80 40
        ansB  190258 ..  190275 - -10.5  -3.14878   TGTCTCAACCCAATA             CGGAGGC CGAA GCCCCCG              TCAAAGACTTATTGG  75 42
CH53_RS00780  188711 ..  188729 -  -8.8  -3.04144   CTTCTATGTGCAACA             GCCCCG CACAGGT CGGGGC             TGTTGTTATACCCGT  67 227
CH53_RS00775  187340 ..  187359 - -12.2  -3.72078   TGATAAAATAAGGAA            TGGGTACC GACT GGTACCCA             TTAGAGGTCAATAAA  89 56
CH53_RS00770 NONE
CH53_RS00765  186333 ..  186347 -  -4.2  -2.87211   ATGCCTCGCCACAGA               TCCTTG CAG CAAGGT               TAAAGTGCTCATCAA  46 97
        rpsA NONE
        ihfB  184103 ..  184134 -  -9.5  -6.07374   AGAAAAAAGAAAAAA      GAAAAACGGTGCC GTTAGA GGCACCGTTTCTT       ATCAGCGTTTATACC 100 123
CH53_RS00750 NONE
CH53_RS00745 NONE
        lpxK  178252 ..  178270 -    -3  -5.72207   CGCAAATGAAAAAAA             TGCCCCGC AAT ACATGGCA             ATTCTCAATGAGAAA  90 429
CH53_RS00730  176545 ..  176560 - -10.4  -5.15634   GATTTTATGAAAAAA              CCCGCA TAAG TGCGGG               CTTTAGAATTTTGCT  93 110
CH53_RS00725  176161 ..  176192 - -13.8  -3.89524   ACCCCAGGGTATAAA      TACAAACGGCTACC AAAA GGTAGCCGTTTGCT       TAGAAAACGAGTTGT 100 52
CH53_RS00720  175574 ..  175589 -  -2.6  -2.90723   CGAGCGGGAATTATA              GCGATGA AAC TCAT-GC              GTGCTTCTCATTAAT  42 20
CH53_RS00715  174787 ..  174810 -  -8.8  -4.65838   GATACAGCGTAAAAA          TGCCAGGCCC GATC GCACCTGGCA           CCAACCGTTCTGTGC  87 50
CH53_RS00710  173764 ..  173779 -  -4.7  -3.46687   AACTTGAAAGATGAA              GGCTA TTAATC TAGCC               AAGGGAGAAGTTGCC  54 15
CH53_RS00700 NONE
CH53_RS00695 NONE
CH53_RS00690 NONE
        mukB  165192 ..  165211 -   -10  -5.38054   TGGGAGAAATAAAAA            TGACCGCT TGTT AGCGGCCA             TTTAATGGGGTTAAT 100 68
CH53_RS00680  162966 ..  162978 -  -5.5  -3.58726   TTCGGTTATAGAGAA                CCCCA ATC TAGGG                CCCCCTATGACAACC  58 78
CH53_RS00675  162186 ..  162200 -    -5  -3.54935   TAAATGCTGTTCAAA               TCAGTT CAC AACCGA               TTCGTCCCTTGTTTG  56 102
CH53_RS00670  161332 ..  161347 - -10.4   -4.8066   AATATAACGTAAAAA              GGCACC AGAC GGTGCC               TTCTTTGAAGTTATG  93 60
CH53_RS00665  159502 ..  159523 - -14.5  -3.07994   CTTAAGTTTACTGAA           GAACCCCAC TTTT GTGGGGTTC            TGTCTTTTTAGCAGC  95 83
        pepN  150423 ..  150440 - -11.3   -4.8543   CAAGGGCGATAAAAA             GAGGGCA TCAC TGCCCTC              TGTGGTATGAAACTA  95 79
CH53_RS00635  149172 ..  149198 -  -6.5  -2.80859   GTAAAATATAGACGA         GCCGGAGGA AGAAATAAA CCCCCCGGC         CAGTAATGAAGTTAA  55 45
CH53_RS00630  148191 ..  148201 -  -6.8  -2.63891   ACCTTTAAAACAGAG                 TGCC ATT GGCA                 ACGACGGAACTATTC  53 154
        rlmL NONE
CH53_RS00615  142954 ..  142965 -    -3  -3.28966   CTATCAAAAGACATA                CTAT AACA ATAG                 ACATAATATCGTCTT  46 75
CH53_RS00610 NONE
CH53_RS00605 NONE
CH53_RS00600  139210 ..  139249 - -13.9  -5.69793   ATATTAAACAAAAAA  CCCTCTTTCGCTG-TAAT TTTTC ATTAGCAACGAAAGAGGG  TTTAACTGATATTAG 100 60
CH53_RS00575  133212 ..  133226 - -12.8  -5.00616   TCCTTTTGTAAAAAA               CCCCGC ATT GCGGGG               TTTTTTTTTGTCATT 100 117
CH53_RS00560  130029 ..  130062 -  -3.9  -4.66388   AAAATGACAAAGAAA     CTCAGGAAGCAGCATT CCG ATTGCT-CTGCCTGAA     CCACACTATGCTGAG  71 347
        helD  125429 ..  125479 - -11.2  -2.98524   AACGACTGAAATAAG CATTAAGCCCGGTGCTACATTATG GGT CAGACCAAACCACCGGGCTTAATG TATTGGGCGATAGCC  81 43
CH53_RS00530  123362 ..  123380 - -11.7   -2.9661   TAATTACTGATAAAG             CCCGGCA TTGAT TGCCGGG             TTTTTTATCGCCAAA  82 59
CH53_RS00515  121261 ..  121292 -    -3  -5.07486   TATGGCGAAGAAAAA      GGTAATAGCCGATA TCTG TATCGTTTATTCCC       CAAAGGGCCAGCAAA  74 145
CH53_RS00505  120595 ..  120611 -  -9.5  -2.68806   TCTGATAACAACGGA              TGAGATG TAA CATCTCA              GATGGCATACTGAAT  70 92
CH53_RS00435 NONE
CH53_RS00430 NONE
CH53_RS00425  101230 ..  101252 -  -6.3  -3.24827   AACATAATTTATCAA           GCATCATCT TCAAG AGAGGATGC           CCAACATCCCTGATC  58 123
CH53_RS00420 NONE
CH53_RS00415 NONE
CH53_RS00410 NONE
CH53_RS00405 NONE
CH53_RS00400   95976 ..   95991 -  -3.2  -3.03038   TATATTTAAATGACA              TCAGGA ACCC TCCTGT               AAATTGGATTCAGCA  45 10
CH53_RS00395 NONE
CH53_RS00390   92998 ..   93023 -  -3.2  -3.21695   CTATCACCAAGGCAA         GCGCGGAACA CCTCAC TGTTTTGCGC          ATGATGATGTCGCCG  46 12
CH53_RS00385 NONE
CH53_RS00380   89220 ..   89245 -  -2.5  -3.45152   TAATGAAAATGAACA         GCGGCAGCAAA ACAT TTTGCTGTAAC          TTAAATGAAAACCAA  48 207
CH53_RS00375 NONE
CH53_RS00370   83275 ..   83292 - -11.3  -3.41134   ATATCCAGCAATCAA             CGTGCAG GACA CTGCACG              CCATTTAGCAAAACG  78 516
CH53_RS00360   81887 ..   81897 -  -2.4  -3.99228   CAACCTAAAATATAA                 TCCG ATA CGGT                 TCAGGTAATTGCCCA  53 4
CH53_RS00355   80842 ..   80861 - -10.8  -5.22943   ATTAAATCTAAAAAA            TCCCGTTT GAAT AAACGGGA             CTTTTACATCAACTT 100 85
CH53_RS00350 NONE
CH53_RS00345 NONE
CH53_RS00340   77066 ..   77080 -  -4.3  -3.33092   ATAGCCATATAAAAT               CATGT AGGGG ACATG               CGTACCCAGCCGGAT  52 266
CH53_RS00335 NONE
CH53_RS00330   74088 ..   74119 - -18.2  -3.70364   TATAAAACGACATAA      CTAATCGCCCCCAA AATA TTAGGGGCGATTAG       CGGGGAGATTATTGC 100 34
CH53_RS00325 NONE
CH53_RS00320   71150 ..   71163 -  -4.5  -3.85698   GTTTTTCTCTATAAA               CGTCG CTAT CAACG                CATTGATGGTTACCA  59 455
CH53_RS00300 NONE
CH53_RS00295   64969 ..   64979 -  -3.2  -2.70932   TGTCGCGGTTAATCA                 CTGA GAC CCAG                 CTTGGCTGCTAATGC  43 8
CH53_RS00290   64035 ..   64069 -  -4.3    -3.395   GTCCAAAAGTAAAAG     GTAGCCCTACTGAAT GCCTG ATTCAGCATAGCGAC     ACCATAATGTTAAAT  52 35
CH53_RS00285   62761 ..   62771 -  -6.8  -2.97676   ACTCACTGAAACAAT                 GGTG AAA CACC                 GTAAAAAAGCGCTTT  59 361
CH53_RS00280   61889 ..   61910 -  -3.1  -3.76781   AAAGATCCGATGAAA           TACTTTG GTTTGATG CAAAGTA            TTAGCGCAAAAATAC  51 105
CH53_RS00270 NONE
CH53_RS00265   60445 ..   60458 -  -3.7  -3.23274   TGCGTTATAATTCAA               CGTCC ATCC GGCCG                GTGTTCACCGAGAAT  48 1
CH53_RS00260 NONE
CH53_RS00255   57004 ..   57022 -  -3.8  -2.60615   ATTGCCCTTAAATAT             CGAGAATG TGT CACTCTCT             GGTGTGATTTCCATG  45 108
CH53_RS00250   56055 ..   56087 -  -6.3  -5.47218   GCTGAGGTAAAAAAA     CCGAATGACGTGGC GTCCCT GCCACGTC-CTCTG      CCGGTTATGGCTGCT  91 30
CH53_RS00245 NONE
CH53_RS00240   52822 ..   52845 -  -5.3  -2.65112   AATTTATCCACATTA          TTTACGGGT ATGACG ACCCGTAAT           ACTTCAAGCCGCAGG  49 177
CH53_RS00235   51208 ..   51221 -  -4.5  -2.52464   GGGGGGCCGAAGCCA               CCCTG TATA CAGAG                AGGAAGGTTGCTAAC  47 36
CH53_RS00230   49847 ..   49863 -  -4.4  -4.39724   AAATCAAACAAATAA              TCAGCC CACTC GGCTAA              TACTTGCCCCTTGCG  66 383
CH53_RS00225   48621 ..   48637 -  -5.1  -4.28597   ACAATTAATAAAGAA              GATACGC CGG ACGCATC              ATGTTGAGTCTCATA  66 77
CH53_RS00215   46484 ..   46534 -  -9.1  -3.14602   TGCACCGCATCAATA CCGCTTACGCACTGACAGCCATTTG GCC CAATTGGCGG-CAATACGCA-GCGG TTTGGGTATCGGTGC  67 292
        mdoG NONE
CH53_RS00185   37553 ..   37576 -  -8.2  -5.80364   ATGGCAATAAAAAAA          CGGGCAATACA TAA TGTAC-GCCCG          TTTTTACTCAATATT 100 61
CH53_RS00180   36788 ..   36809 -  -5.9  -3.95073   GCCCACACGCATAAA           CAACCA-CGA CCA CCGGTGGTTG           ATGCCATGCTGGAAG  64 333
CH53_RS00170   36049 ..   36064 - -11.8  -3.64703   CCCTGCTCACGCAAA              CCCGCC TGGT GGCGGG               TTTTGTTCTACAACT  89 33
CH53_RS00135 NONE
CH53_RS00130 NONE
CH53_RS00125   23120 ..   23140 -  -8.3  -5.38958   ACGTAGAAAGAAAAA            TCCCTCTTT AAT AACGAGGGA            TTTAAGTCAAAATTG  95 49
CH53_RS00120 NONE
CH53_RS00115   21579 ..   21609 -  -7.6  -5.26918   ATATGGCATAAAAAA       GACGCTATCGAATA AAA TAACCGACAACGTC       TTACTTTAATAGTGT  90 63
        tqsA   20464 ..   20476 -  -4.1  -3.91897   TGGCCCAGCGATAAA                TACGA TAT CCGTA                GTTTTGCGCTACTCA  57 34
CH53_RS00075   15235 ..   15250 - -11.8  -4.79451   ATTGCAAAGACAAAA              CCCGCC ATCA GGCGGG               TTTTTTTTATATTGG 100 66
CH53_RS00065   10123 ..   10150 - -14.2   -5.7946   TGCTGAATAAAAAAA        CAGGGTGCAGTT TCAT ACCTGCACCCTG         CTATTTCGATGAGTT 100 52
CH53_RS00055 NONE
        rpmF    8644 ..    8661 -    -2  -3.49475   GCTAGGGTTAGACAA             GTCAAGG TATCG CCTTG-C             TAAAGATTAGCAAGT  47 46
CH53_RS00045 NONE
CH53_RS00040    6668 ..    6678 -  -2.4  -2.98982   ATCAAAAACGAACCA                 GCGC AGA GCCC                 CAGGTAAAGCCACCG  42 1
CH53_RS00035 NONE
        fabG    4790 ..    4803 -  -2.3  -4.25848   AATTTCCTATCAAAA               CTCGC TTTC GCGAT                GGTTTTCGTAGTGTA  56 143
CH53_RS00025    4481 ..    4506 - -11.9   -5.9873   TTAGGACAAAAAAAA         CTTAGGCGGTC GAGT GACCGCCTAAC          TATCTAAACTTAAAG 100 50
CH53_RS00020    3142 ..    3169 -   -15  -3.17075   GTGGGGTTAACCTAA        TAAAAGACCCGG AAGA CCGGGCCTTTTA         AGCGGCAGAAGTTTA 100 51
CH53_RS00015    2060 ..    2076 -  -3.7  -2.85583   TTAAAACCAACATGA              TGATGCT GAG ACCATCA              CTTATACATCGCAAC   0 27
