M481_RS00575	SM00271	DnaJ molecular chaperone homology domain
M481_RS00690	SM00831	Cation transporter/ATPase, N-terminus
M481_RS01040	SM00487	DEAD-like helicases superfamily
M481_RS01205	SM00842	Cell division protein FtsA
M481_RS01280	SM01321	M481_RS01280
M481_RS01285	SM00354	helix_turn _helix lactose operon repressor
M481_RS01295	SM01321	M481_RS01295
M481_RS01335	SM00917	LeuA allosteric (dimerisation) domain
M481_RS01340	SM01329	M481_RS01340
M481_RS01385	SM00382	ATPases associated with a variety of cellular activities
M481_RS01395	SM00486	DNA polymerase type-B family
M481_RS01400	SM00487	DEAD-like helicases superfamily
M481_RS01400	SM00490	helicase superfamily c-terminal domain
M481_RS01455	SM00382	ATPases associated with a variety of cellular activities
M481_RS01455	SM01086	C-terminal, D2-small domain, of ClpB protein
M481_RS01505	SM00271	DnaJ molecular chaperone homology domain
M481_RS01525	SM00650	Ribosomal RNA adenine dimethylases
M481_RS01575	SM00851	MGS-like domain
M481_RS01575	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
M481_RS01580	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
M481_RS01615	SM00904	Riboflavin kinase
M481_RS01640	SM00271	DnaJ molecular chaperone homology domain
M481_RS01665	SM00852	Probable molybdopterin binding domain
M481_RS01670	SM01321	M481_RS01670
M481_RS01705	SM00448	cheY-homologous receiver domain
M481_RS01705	SM00862	Transcriptional regulatory protein, C terminal
M481_RS01715	SM00342	helix_turn_helix, arabinose operon control protein
M481_RS01715	SM00871	Bacterial transcription activator, effector binding domain
M481_RS01720	SM00855	Phosphoglycerate mutase family
M481_RS01740	SM00831	Cation transporter/ATPase, N-terminus
M481_RS01750	SM00267	diguanylate cyclase
M481_RS01760	SM00382	ATPases associated with a variety of cellular activities
M481_RS01770	SM00530	Helix-turn-helix XRE-family like proteins 
M481_RS01775	SM00382	ATPases associated with a variety of cellular activities
M481_RS01800	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
M481_RS01805	SM01133	M481_RS01805
M481_RS01830	SM00749	bacterial OsmY and nodulation domain
M481_RS01865	SM00267	diguanylate cyclase
M481_RS01935	SM00382	ATPases associated with a variety of cellular activities
M481_RS01955	SM01133	M481_RS01955
M481_RS01990	SM00342	helix_turn_helix, arabinose operon control protein
M481_RS02065	SM00382	ATPases associated with a variety of cellular activities
M481_RS02075	SM00382	ATPases associated with a variety of cellular activities
M481_RS02160	SM00382	ATPases associated with a variety of cellular activities
M481_RS02165	SM00382	ATPases associated with a variety of cellular activities
M481_RS02180	SM00345	helix_turn_helix gluconate operon transcriptional repressor
M481_RS02180	SM00866	M481_RS02180
M481_RS02205	SM00382	ATPases associated with a variety of cellular activities
M481_RS02210	SM00382	ATPases associated with a variety of cellular activities
M481_RS02220	SM00072	Guanylate kinase homologues.
M481_RS02225	SM00849	Metallo-beta-lactamase superfamily
M481_RS02230	SM00859	Semialdehyde dehydrogenase, NAD binding domain
M481_RS02245	SM00382	ATPases associated with a variety of cellular activities
M481_RS02325	SM00530	Helix-turn-helix XRE-family like proteins 
M481_RS02340	SM00487	DEAD-like helicases superfamily
M481_RS02340	SM00490	helicase superfamily c-terminal domain
M481_RS02345	SM00028	Tetratricopeptide repeats
M481_RS02350	SM00316	Ribosomal protein S1-like RNA-binding domain
M481_RS02350	SM00322	K homology RNA-binding domain
M481_RS02400	SM00642	Alpha-amylase domain
M481_RS02405	SM00642	Alpha-amylase domain
M481_RS02415	SM00257	Lysin motif
M481_RS02415	SM00634	Bacterial Ig-like domain (group 1)
M481_RS02440	SM00859	Semialdehyde dehydrogenase, NAD binding domain
M481_RS02475	SM00354	helix_turn _helix lactose operon repressor
M481_RS02490	SM00448	cheY-homologous receiver domain
M481_RS02490	SM00862	Transcriptional regulatory protein, C terminal
M481_RS02520	SM00382	ATPases associated with a variety of cellular activities
M481_RS02525	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
M481_RS02525	SM00387	Histidine kinase-like ATPases
M481_RS02525	SM00388	His Kinase A (phosphoacceptor) domain
M481_RS02525	SM00448	cheY-homologous receiver domain
M481_RS02540	SM01321	M481_RS02540
M481_RS02555	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
M481_RS02560	SM00235	Zinc-dependent metalloprotease
M481_RS02615	SM00869	Autotransporter beta-domain
M481_RS02635	SM00052	Putative diguanylate phosphodiesterase
M481_RS02675	SM00052	Putative diguanylate phosphodiesterase
M481_RS02675	SM00267	diguanylate cyclase
M481_RS02685	SM00382	ATPases associated with a variety of cellular activities
M481_RS02690	SM00382	ATPases associated with a variety of cellular activities
M481_RS02720	SM00912	haemagglutination activity domain
M481_RS02735	SM00387	Histidine kinase-like ATPases
M481_RS02740	SM00421	helix_turn_helix, Lux Regulon
M481_RS02740	SM00448	cheY-homologous receiver domain
M481_RS02750	SM00382	ATPases associated with a variety of cellular activities
M481_RS02840	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
M481_RS02840	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
M481_RS02845	SM01004	Delta-aminolevulinic acid dehydratase
M481_RS02940	SM00382	ATPases associated with a variety of cellular activities
M481_RS02995	SM00382	ATPases associated with a variety of cellular activities
M481_RS03000	SM00382	ATPases associated with a variety of cellular activities
M481_RS03025	SM01321	M481_RS03025
M481_RS03045	SM00382	ATPases associated with a variety of cellular activities
M481_RS03050	SM00382	ATPases associated with a variety of cellular activities
M481_RS03050	SM00962	SRP54-type protein, GTPase domain
M481_RS03050	SM00963	SRP54-type protein, helical bundle domain
M481_RS03155	SM00341	Helicase and RNase D C-terminal
M481_RS03155	SM00487	DEAD-like helicases superfamily
M481_RS03155	SM00490	helicase superfamily c-terminal domain
M481_RS03155	SM00956	M481_RS03155
M481_RS03225	SM01219	M481_RS03225
M481_RS03255	SM01321	M481_RS03255
M481_RS03325	SM00984	UDP binding domain
M481_RS03345	SM00357	Cold shock protein domain
M481_RS03345	SM00382	ATPases associated with a variety of cellular activities
M481_RS03345	SM00959	Rho termination factor, N-terminal domain
M481_RS03355	SM00487	DEAD-like helicases superfamily
M481_RS03355	SM00490	helicase superfamily c-terminal domain
M481_RS03425	SM00507	HNH nucleases
M481_RS03505	SM00382	ATPases associated with a variety of cellular activities
M481_RS03530	SM00382	ATPases associated with a variety of cellular activities
M481_RS03580	SM00798	AICARFT/IMPCHase bienzyme
M481_RS03580	SM00851	MGS-like domain
M481_RS03585	SM01209	M481_RS03585
M481_RS03585	SM01210	M481_RS03585
M481_RS03595	SM00411	bacterial (prokaryotic) histone like domain
M481_RS03670	SM00663	RNA polymerase I subunit A N-terminus
M481_RS03695	SM00649	Ribosomal protein L11/L12
M481_RS03700	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
M481_RS03700	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
M481_RS03805	SM00382	ATPases associated with a variety of cellular activities
M481_RS03820	SM00530	Helix-turn-helix XRE-family like proteins 
M481_RS03850	SM00342	helix_turn_helix, arabinose operon control protein
M481_RS03860	SM00382	ATPases associated with a variety of cellular activities
M481_RS03955	SM00487	DEAD-like helicases superfamily
M481_RS03955	SM00490	helicase superfamily c-terminal domain
M481_RS03965	SM00354	helix_turn _helix lactose operon repressor
M481_RS03980	SM00382	ATPases associated with a variety of cellular activities
M481_RS03980	SM01086	C-terminal, D2-small domain, of ClpB protein
M481_RS04015	SM00382	ATPases associated with a variety of cellular activities
M481_RS04020	SM01321	M481_RS04020
M481_RS04120	SM00448	cheY-homologous receiver domain
M481_RS04120	SM00862	Transcriptional regulatory protein, C terminal
M481_RS04125	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
M481_RS04125	SM00387	Histidine kinase-like ATPases
M481_RS04125	SM00388	His Kinase A (phosphoacceptor) domain
M481_RS04130	SM00342	helix_turn_helix, arabinose operon control protein
M481_RS04140	SM00971	Serine acetyltransferase, N-terminal
M481_RS04165	SM00450	Rhodanese Homology Domain
M481_RS04185	SM00829	Enoylreductase
M481_RS04225	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
M481_RS04225	SM01232	M481_RS04225
M481_RS04280	SM00532	Ligase N family
M481_RS04285	SM00072	Guanylate kinase homologues.
M481_RS04290	SM01409	M481_RS04290
M481_RS04295	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
M481_RS04295	SM00954	Region found in RelA / SpoT proteins
M481_RS04305	SM00487	DEAD-like helicases superfamily
M481_RS04305	SM00490	helicase superfamily c-terminal domain
M481_RS04335	SM00382	ATPases associated with a variety of cellular activities
M481_RS04365	SM01230	M481_RS04365
M481_RS04370	SM00091	PAS domain
M481_RS04370	SM00387	Histidine kinase-like ATPases
M481_RS04370	SM00388	His Kinase A (phosphoacceptor) domain
M481_RS04375	SM00382	ATPases associated with a variety of cellular activities
M481_RS04375	SM00448	cheY-homologous receiver domain
M481_RS04380	SM00729	Elongator protein 3, MiaB family, Radical SAM
M481_RS04395	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
M481_RS04395	SM00474	3'-5' exonuclease
M481_RS04395	SM00475	5'-3' exonuclease
M481_RS04395	SM00482	DNA polymerase A domain
M481_RS04455	SM00345	helix_turn_helix gluconate operon transcriptional repressor
M481_RS04455	SM00895	M481_RS04455
M481_RS04485	SM00382	ATPases associated with a variety of cellular activities
M481_RS04490	SM00327	von Willebrand factor (vWF) type A domain
M481_RS04500	SM00344	helix_turn_helix ASNC type
M481_RS04510	SM01228	M481_RS04510
M481_RS04555	SM00382	ATPases associated with a variety of cellular activities
M481_RS04590	SM00382	ATPases associated with a variety of cellular activities
M481_RS04605	SM00062	Bacterial periplasmic substrate-binding proteins
M481_RS04665	SM00382	ATPases associated with a variety of cellular activities
M481_RS04665	SM00760	Bacterial dnaA protein helix-turn-helix domain
M481_RS04670	SM00480	DNA polymerase III beta subunit
M481_RS04685	SM00387	Histidine kinase-like ATPases
M481_RS04685	SM00433	TopoisomeraseII
M481_RS04755	SM00642	Alpha-amylase domain
M481_RS04830	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
M481_RS04830	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
M481_RS04830	SM01358	M481_RS04830
M481_RS04845	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
M481_RS04925	SM00420	helix_turn_helix, Deoxyribose operon repressor
M481_RS04925	SM01134	M481_RS04925
M481_RS04935	SM00450	Rhodanese Homology Domain
M481_RS04940	SM00421	helix_turn_helix, Lux Regulon
M481_RS04985	SM00899	M481_RS04985
M481_RS04995	SM00316	Ribosomal protein S1-like RNA-binding domain
M481_RS04995	SM00732	Likely ribonuclease with RNase H fold.
M481_RS05005	SM00448	cheY-homologous receiver domain
M481_RS05005	SM00862	Transcriptional regulatory protein, C terminal
M481_RS05010	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
M481_RS05010	SM00387	Histidine kinase-like ATPases
M481_RS05010	SM00388	His Kinase A (phosphoacceptor) domain
M481_RS05025	SM00363	S4 RNA-binding domain
M481_RS05155	SM00354	helix_turn _helix lactose operon repressor
M481_RS05190	SM00100	Cyclic nucleotide-monophosphate binding domain
M481_RS05190	SM00419	helix_turn_helix, cAMP Regulatory protein
M481_RS05225	SM00062	Bacterial periplasmic substrate-binding proteins
M481_RS05230	SM00382	ATPases associated with a variety of cellular activities
M481_RS05255	SM00382	ATPases associated with a variety of cellular activities
M481_RS05320	SM00838	Elongation factor G C-terminus
M481_RS05320	SM00889	Elongation factor G, domain IV
M481_RS05330	SM01321	M481_RS05330
M481_RS05350	SM00382	ATPases associated with a variety of cellular activities
M481_RS05355	SM01403	M481_RS05355
M481_RS05375	SM01382	M481_RS05375
M481_RS05375	SM01383	M481_RS05375
M481_RS05390	SM00322	K homology RNA-binding domain
M481_RS05410	SM01374	M481_RS05410
M481_RS05415	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
M481_RS05480	SM00363	S4 RNA-binding domain
M481_RS05480	SM01390	M481_RS05480
M481_RS05485	SM00662	RNA polymerases D
M481_RS05495	SM00422	helix_turn_helix, mercury resistance
M481_RS05595	SM00382	ATPases associated with a variety of cellular activities
M481_RS05630	SM00421	helix_turn_helix, Lux Regulon
M481_RS05630	SM00448	cheY-homologous receiver domain
M481_RS05635	SM00387	Histidine kinase-like ATPases
M481_RS05635	SM00388	His Kinase A (phosphoacceptor) domain
M481_RS05635	SM00448	cheY-homologous receiver domain
M481_RS05655	SM00342	helix_turn_helix, arabinose operon control protein
M481_RS05695	SM00382	ATPases associated with a variety of cellular activities
M481_RS05760	SM00382	ATPases associated with a variety of cellular activities
M481_RS05800	SM00729	Elongator protein 3, MiaB family, Radical SAM
M481_RS05900	SM00060	Fibronectin type 3 domain
M481_RS05920	SM00563	Phosphate acyltransferases
M481_RS05950	SM00829	Enoylreductase
M481_RS05955	SM00382	ATPases associated with a variety of cellular activities
M481_RS05960	SM01005	Alanine racemase, C-terminal domain
M481_RS05995	SM01007	Class II Aldolase and Adducin N-terminal domain
M481_RS06020	SM00342	helix_turn_helix, arabinose operon control protein
M481_RS06025	SM00342	helix_turn_helix, arabinose operon control protein
M481_RS06050	SM01276	M481_RS06050
M481_RS06075	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
M481_RS06105	SM00883	Chaperonin 10 Kd subunit
M481_RS06125	SM00841	Elongation factor P, C-terminal
M481_RS06125	SM01185	M481_RS06125
M481_RS06185	SM00479	M481_RS06185
M481_RS06210	SM00257	Lysin motif
M481_RS06210	SM00646	M481_RS06210
M481_RS06215	SM00853	MutL C terminal dimerisation domain
M481_RS06215	SM01340	M481_RS06215
M481_RS06235	SM00244	prohibitin homologues
M481_RS06240	SM00244	prohibitin homologues
M481_RS06250	SM00788	Adenylosuccinate synthetase
M481_RS06265	SM00967	RNA 2'-O ribose methyltransferase substrate binding
M481_RS06285	SM00382	ATPases associated with a variety of cellular activities
M481_RS06320	SM01321	M481_RS06320
M481_RS06365	SM00116	Domain in cystathionine beta-synthase and other proteins.
M481_RS06365	SM01091	Transporter associated domain
M481_RS06460	SM00387	Histidine kinase-like ATPases
M481_RS06460	SM00388	His Kinase A (phosphoacceptor) domain
M481_RS06465	SM00448	cheY-homologous receiver domain
M481_RS06465	SM00862	Transcriptional regulatory protein, C terminal
M481_RS06480	SM01103	M481_RS06480
M481_RS06490	SM00382	ATPases associated with a variety of cellular activities
M481_RS06525	SM00316	Ribosomal protein S1-like RNA-binding domain
M481_RS06525	SM00322	K homology RNA-binding domain
M481_RS06545	SM01387	M481_RS06545
M481_RS06570	SM00859	Semialdehyde dehydrogenase, NAD binding domain
M481_RS06600	SM00382	ATPases associated with a variety of cellular activities
M481_RS06695	SM00155	Phospholipase D. Active site motifs.
M481_RS06700	SM00881	CoA binding domain
M481_RS06705	SM01144	M481_RS06705
M481_RS06715	SM00967	RNA 2'-O ribose methyltransferase substrate binding
M481_RS06730	SM00347	helix_turn_helix multiple antibiotic resistance protein
M481_RS06775	SM00062	Bacterial periplasmic substrate-binding proteins
M481_RS06790	SM00382	ATPases associated with a variety of cellular activities
M481_RS06800	SM00382	ATPases associated with a variety of cellular activities
M481_RS06830	SM01007	Class II Aldolase and Adducin N-terminal domain
M481_RS06860	SM00710	Parallel beta-helix repeats
M481_RS06860	SM00912	haemagglutination activity domain
M481_RS06875	SM01321	M481_RS06875
M481_RS06910	SM00900	M481_RS06910
M481_RS06965	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
M481_RS06990	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
M481_RS07065	SM00448	cheY-homologous receiver domain
M481_RS07065	SM00862	Transcriptional regulatory protein, C terminal
M481_RS07070	SM00091	PAS domain
M481_RS07070	SM00387	Histidine kinase-like ATPases
M481_RS07070	SM00388	His Kinase A (phosphoacceptor) domain
M481_RS07090	SM00642	Alpha-amylase domain
M481_RS07130	SM01323	M481_RS07130
M481_RS07145	SM01321	M481_RS07145
M481_RS07190	SM01321	M481_RS07190
M481_RS07195	SM00861	Transketolase, pyrimidine binding domain
M481_RS07215	SM00981	M481_RS07215
M481_RS07300	SM00382	ATPases associated with a variety of cellular activities
M481_RS07300	SM00994	ClpX C4-type zinc finger
M481_RS07300	SM01086	C-terminal, D2-small domain, of ClpB protein
M481_RS07305	SM00382	ATPases associated with a variety of cellular activities
M481_RS07305	SM00464	Found in ATP-dependent protease La (LON)
M481_RS07310	SM00411	bacterial (prokaryotic) histone like domain
M481_RS07320	SM01321	M481_RS07320
M481_RS07360	SM00344	helix_turn_helix ASNC type
M481_RS07365	SM00382	ATPases associated with a variety of cellular activities
M481_RS07370	SM00382	ATPases associated with a variety of cellular activities
M481_RS07375	SM00938	Nitrogen regulatory protein P-II
M481_RS07470	SM00382	ATPases associated with a variety of cellular activities
M481_RS07480	SM00493	M481_RS07480
M481_RS07485	SM00387	Histidine kinase-like ATPases
M481_RS07640	SM00422	helix_turn_helix, mercury resistance
M481_RS07650	SM00244	prohibitin homologues
M481_RS07660	SM00822	M481_RS07660
M481_RS07670	SM00382	ATPases associated with a variety of cellular activities
M481_RS07685	SM01001	AIR carboxylase
M481_RS07700	SM00840	M481_RS07700
M481_RS07770	SM00563	Phosphate acyltransferases
M481_RS07780	SM00195	Dual specificity phosphatase, catalytic domain
M481_RS07780	SM00404	Protein tyrosine phosphatase, catalytic domain motif
M481_RS07795	SM00382	ATPases associated with a variety of cellular activities
M481_RS07835	SM01217	M481_RS07835
M481_RS07865	SM00869	Autotransporter beta-domain
M481_RS07915	SM01359	M481_RS07915
M481_RS07915	SM01360	M481_RS07915
M481_RS07950	SM00382	ATPases associated with a variety of cellular activities
M481_RS07985	SM00382	ATPases associated with a variety of cellular activities
M481_RS08010	SM00421	helix_turn_helix, Lux Regulon
M481_RS08020	SM00357	Cold shock protein domain
M481_RS08040	SM00729	Elongator protein 3, MiaB family, Radical SAM
M481_RS08055	SM00936	Penicillin-binding protein 5, C-terminal domain 
M481_RS08110	SM00382	ATPases associated with a variety of cellular activities
M481_RS08125	SM00062	Bacterial periplasmic substrate-binding proteins
M481_RS08135	SM00116	Domain in cystathionine beta-synthase and other proteins.
M481_RS08135	SM01091	Transporter associated domain
M481_RS08150	SM00729	Elongator protein 3, MiaB family, Radical SAM
M481_RS08285	SM00382	ATPases associated with a variety of cellular activities
M481_RS08320	SM00778	Zinc-binding domain of primase-helicase
M481_RS08370	SM01321	M481_RS08370
M481_RS08440	SM00861	Transketolase, pyrimidine binding domain
M481_RS08455	SM00881	CoA binding domain
M481_RS08460	SM01321	M481_RS08460
M481_RS08560	SM00855	Phosphoglycerate mutase family
M481_RS08605	SM00382	ATPases associated with a variety of cellular activities
M481_RS08630	SM00382	ATPases associated with a variety of cellular activities
M481_RS08650	SM00729	Elongator protein 3, MiaB family, Radical SAM
M481_RS08650	SM00876	Biotin and Thiamin Synthesis associated domain
M481_RS08670	SM00382	ATPases associated with a variety of cellular activities
M481_RS08675	SM00487	DEAD-like helicases superfamily
M481_RS08675	SM00490	helicase superfamily c-terminal domain
M481_RS08695	SM00729	Elongator protein 3, MiaB family, Radical SAM
M481_RS08725	SM01321	M481_RS08725
M481_RS08770	SM01321	M481_RS08770
M481_RS08800	SM01118	M481_RS08800
M481_RS08805	SM00507	HNH nucleases
M481_RS08820	SM00382	ATPases associated with a variety of cellular activities
M481_RS08865	SM00382	ATPases associated with a variety of cellular activities
M481_RS08880	SM00450	Rhodanese Homology Domain
M481_RS08895	SM00382	ATPases associated with a variety of cellular activities
M481_RS08940	SM00487	DEAD-like helicases superfamily
M481_RS08940	SM00488	M481_RS08940
M481_RS08940	SM00491	M481_RS08940
M481_RS08945	SM01060	M481_RS08945
M481_RS08960	SM00852	Probable molybdopterin binding domain
M481_RS08990	SM00434	DNA Topoisomerase IV
M481_RS09000	SM00387	Histidine kinase-like ATPases
M481_RS09000	SM00388	His Kinase A (phosphoacceptor) domain
M481_RS09000	SM00448	cheY-homologous receiver domain
M481_RS09005	SM00421	helix_turn_helix, Lux Regulon
M481_RS09005	SM00448	cheY-homologous receiver domain
M481_RS09060	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
M481_RS09060	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
M481_RS09075	SM00530	Helix-turn-helix XRE-family like proteins 
M481_RS09090	SM01007	Class II Aldolase and Adducin N-terminal domain
M481_RS09095	SM00420	helix_turn_helix, Deoxyribose operon repressor
M481_RS09095	SM01134	M481_RS09095
M481_RS09225	SM01321	M481_RS09225
M481_RS09235	SM00487	DEAD-like helicases superfamily
M481_RS09235	SM00490	helicase superfamily c-terminal domain
M481_RS09240	SM00363	S4 RNA-binding domain
M481_RS09255	SM00382	ATPases associated with a variety of cellular activities
M481_RS09275	SM00052	Putative diguanylate phosphodiesterase
M481_RS09285	SM00014	Acid phosphatase homologues
M481_RS09290	SM00833	Cobalamin synthesis protein cobW C-terminal domain
M481_RS09315	SM00841	Elongation factor P, C-terminal
M481_RS09315	SM01185	M481_RS09315
M481_RS09365	SM00382	ATPases associated with a variety of cellular activities
M481_RS09395	SM00862	Transcriptional regulatory protein, C terminal
M481_RS09420	SM00518	AP endonuclease family 2
M481_RS09440	SM01321	M481_RS09440
M481_RS09455	SM00382	ATPases associated with a variety of cellular activities
M481_RS09485	SM00382	ATPases associated with a variety of cellular activities
M481_RS09485	SM00930	M481_RS09485
M481_RS09495	SM00936	Penicillin-binding protein 5, C-terminal domain 
M481_RS09510	SM00420	helix_turn_helix, Deoxyribose operon repressor
M481_RS09510	SM01134	M481_RS09510
M481_RS09515	SM01133	M481_RS09515
M481_RS09520	SM00014	Acid phosphatase homologues
M481_RS09560	SM00382	ATPases associated with a variety of cellular activities
M481_RS09585	SM00062	Bacterial periplasmic substrate-binding proteins
M481_RS09585	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
M481_RS09600	SM00244	prohibitin homologues
M481_RS09615	SM00382	ATPases associated with a variety of cellular activities
M481_RS09645	SM00062	Bacterial periplasmic substrate-binding proteins
M481_RS09645	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
M481_RS09650	SM00382	ATPases associated with a variety of cellular activities
M481_RS09655	SM00830	Chorismate mutase type II
M481_RS09715	SM00382	ATPases associated with a variety of cellular activities
M481_RS09720	SM00357	Cold shock protein domain
M481_RS09730	SM00382	ATPases associated with a variety of cellular activities
M481_RS09730	SM01086	C-terminal, D2-small domain, of ClpB protein
M481_RS09735	SM01321	M481_RS09735
M481_RS09740	SM00316	Ribosomal protein S1-like RNA-binding domain
M481_RS09750	SM00382	ATPases associated with a variety of cellular activities
M481_RS09755	SM00382	ATPases associated with a variety of cellular activities
M481_RS09770	SM00344	helix_turn_helix ASNC type
M481_RS09775	SM00843	M481_RS09775
M481_RS09785	SM00382	ATPases associated with a variety of cellular activities
M481_RS09825	SM00870	M481_RS09825
M481_RS09855	SM00316	Ribosomal protein S1-like RNA-binding domain
M481_RS09860	SM00411	bacterial (prokaryotic) histone like domain
M481_RS09870	SM00849	Metallo-beta-lactamase superfamily
M481_RS09875	SM00382	ATPases associated with a variety of cellular activities
M481_RS09885	SM01150	M481_RS09885
M481_RS09895	SM00357	Cold shock protein domain
M481_RS09945	SM01321	M481_RS09945
M481_RS09960	SM00849	Metallo-beta-lactamase superfamily
M481_RS10005	SM00981	M481_RS10005
M481_RS10010	SM00382	ATPases associated with a variety of cellular activities
M481_RS10045	SM01321	M481_RS10045
M481_RS10075	SM00062	Bacterial periplasmic substrate-binding proteins
M481_RS10080	SM01211	M481_RS10080
M481_RS10100	SM01321	M481_RS10100
M481_RS10105	SM00387	Histidine kinase-like ATPases
M481_RS10105	SM00388	His Kinase A (phosphoacceptor) domain
M481_RS10115	SM00382	ATPases associated with a variety of cellular activities
M481_RS10115	SM00448	cheY-homologous receiver domain
M481_RS10125	SM00938	Nitrogen regulatory protein P-II
M481_RS10135	SM00382	ATPases associated with a variety of cellular activities
M481_RS10215	SM00271	DnaJ molecular chaperone homology domain
M481_RS10255	SM00869	Autotransporter beta-domain
M481_RS10265	SM00247	Beta/gamma crystallins
M481_RS10270	SM00562	M481_RS10270
M481_RS10280	SM00028	Tetratricopeptide repeats
M481_RS10285	SM00530	Helix-turn-helix XRE-family like proteins 
M481_RS10305	SM00564	beta-propeller repeat
M481_RS10330	SM00116	Domain in cystathionine beta-synthase and other proteins.
M481_RS10330	SM01240	M481_RS10330
M481_RS10350	SM01321	M481_RS10350
M481_RS10415	SM00046	Diacylglycerol kinase catalytic domain (presumed)
M481_RS10430	SM00448	cheY-homologous receiver domain
M481_RS10430	SM00862	Transcriptional regulatory protein, C terminal
M481_RS10435	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
M481_RS10435	SM00387	Histidine kinase-like ATPases
M481_RS10435	SM00388	His Kinase A (phosphoacceptor) domain
M481_RS10460	SM00382	ATPases associated with a variety of cellular activities
M481_RS10465	SM00345	helix_turn_helix gluconate operon transcriptional repressor
M481_RS10495	SM00924	MgtE intracellular N domain
M481_RS10525	SM00382	ATPases associated with a variety of cellular activities
M481_RS10560	SM01321	M481_RS10560
M481_RS10610	SM01130	M481_RS10610
M481_RS10625	SM01321	M481_RS10625
M481_RS10685	SM00382	ATPases associated with a variety of cellular activities
M481_RS10720	SM00421	helix_turn_helix, Lux Regulon
M481_RS10720	SM00448	cheY-homologous receiver domain
M481_RS10735	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
M481_RS10755	SM00919	Malic enzyme, NAD binding domain
M481_RS10755	SM01274	M481_RS10755
M481_RS10785	SM01321	M481_RS10785
M481_RS10795	SM00869	Autotransporter beta-domain
M481_RS10815	SM01130	M481_RS10815
M481_RS10825	SM00364	Leucine-rich repeats, bacterial type
M481_RS10825	SM00369	Leucine-rich repeats, typical (most populated) subfamily
M481_RS10870	SM00382	ATPases associated with a variety of cellular activities
M481_RS10885	SM00448	cheY-homologous receiver domain
M481_RS10885	SM00862	Transcriptional regulatory protein, C terminal
M481_RS10890	SM00387	Histidine kinase-like ATPases
M481_RS10890	SM00388	His Kinase A (phosphoacceptor) domain
M481_RS10895	SM00327	von Willebrand factor (vWF) type A domain
M481_RS10925	SM00450	Rhodanese Homology Domain
M481_RS10930	SM00382	ATPases associated with a variety of cellular activities
M481_RS10940	SM00448	cheY-homologous receiver domain
M481_RS10940	SM00862	Transcriptional regulatory protein, C terminal
M481_RS10945	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
M481_RS10945	SM00387	Histidine kinase-like ATPases
M481_RS10945	SM00388	His Kinase A (phosphoacceptor) domain
M481_RS10955	SM01321	M481_RS10955
M481_RS10985	SM00771	ZipA, C-terminal domain (FtsZ-binding)
M481_RS10990	SM00278	Helix-hairpin-helix DNA-binding motif class 1
M481_RS10990	SM00292	breast cancer carboxy-terminal domain
M481_RS10990	SM00532	Ligase N family
M481_RS11010	SM01321	M481_RS11010
M481_RS11135	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
M481_RS11155	SM00382	ATPases associated with a variety of cellular activities
M481_RS11175	SM00421	helix_turn_helix, Lux Regulon
M481_RS11220	SM00382	ATPases associated with a variety of cellular activities
M481_RS11220	SM01086	C-terminal, D2-small domain, of ClpB protein
M481_RS11295	SM00382	ATPases associated with a variety of cellular activities
M481_RS11365	SM00382	ATPases associated with a variety of cellular activities
M481_RS11435	SM00855	Phosphoglycerate mutase family
M481_RS11440	SM00463	Small MutS-related domain
M481_RS11480	SM00825	Beta-ketoacyl synthase
M481_RS11510	SM00342	helix_turn_helix, arabinose operon control protein
M481_RS11520	SM00859	Semialdehyde dehydrogenase, NAD binding domain
M481_RS11565	SM00062	Bacterial periplasmic substrate-binding proteins
M481_RS11580	SM00382	ATPases associated with a variety of cellular activities
M481_RS11590	SM00052	Putative diguanylate phosphodiesterase
M481_RS11620	SM00354	helix_turn _helix lactose operon repressor
M481_RS11665	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
M481_RS11705	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
M481_RS11710	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
M481_RS11710	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
M481_RS11775	SM00354	helix_turn _helix lactose operon repressor
M481_RS11845	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
M481_RS11875	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
M481_RS11875	SM00091	PAS domain
M481_RS11875	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
M481_RS11880	SM00382	ATPases associated with a variety of cellular activities
M481_RS11890	SM00062	Bacterial periplasmic substrate-binding proteins
M481_RS11890	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
M481_RS11940	SM00829	Enoylreductase
M481_RS11960	SM00354	helix_turn _helix lactose operon repressor
M481_RS11970	SM01329	M481_RS11970
M481_RS12000	SM00912	haemagglutination activity domain
M481_RS12050	SM00382	ATPases associated with a variety of cellular activities
M481_RS12060	SM00354	helix_turn _helix lactose operon repressor
M481_RS12160	SM00421	helix_turn_helix, Lux Regulon
M481_RS12190	SM00450	Rhodanese Homology Domain
M481_RS12200	SM00421	helix_turn_helix, Lux Regulon
M481_RS12240	SM00316	Ribosomal protein S1-like RNA-binding domain
M481_RS12245	SM00363	S4 RNA-binding domain
M481_RS12275	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
M481_RS12280	SM00822	M481_RS12280
M481_RS12290	SM00825	Beta-ketoacyl synthase
M481_RS12295	SM01321	M481_RS12295
M481_RS12330	SM01321	M481_RS12330
M481_RS12395	SM00487	DEAD-like helicases superfamily
M481_RS12395	SM00490	helicase superfamily c-terminal domain
M481_RS12395	SM00982	M481_RS12395
M481_RS12395	SM01058	CarD-like/TRCF domain
M481_RS12405	SM00382	ATPases associated with a variety of cellular activities
M481_RS12430	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
M481_RS12435	SM00387	Histidine kinase-like ATPases
M481_RS12435	SM00388	His Kinase A (phosphoacceptor) domain
M481_RS12440	SM00448	cheY-homologous receiver domain
M481_RS12440	SM00862	Transcriptional regulatory protein, C terminal
M481_RS12475	SM01329	M481_RS12475
M481_RS12480	SM00354	helix_turn _helix lactose operon repressor
M481_RS12490	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
M481_RS12490	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
M481_RS12525	SM00344	helix_turn_helix ASNC type
M481_RS12535	SM00829	Enoylreductase
M481_RS12540	SM01038	Beta galactosidase small chain
M481_RS12545	SM00357	Cold shock protein domain
M481_RS12570	SM00831	Cation transporter/ATPase, N-terminus
M481_RS12595	SM00073	Histidine Phosphotransfer domain
M481_RS12595	SM00260	Two component signalling adaptor domain
M481_RS12595	SM00387	Histidine kinase-like ATPases
M481_RS12595	SM01231	M481_RS12595
M481_RS12600	SM00260	Two component signalling adaptor domain
M481_RS12625	SM00869	Autotransporter beta-domain
M481_RS12640	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
M481_RS12640	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
M481_RS12640	SM00319	Homologues of the ligand binding domain of Tar
M481_RS12645	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
M481_RS12645	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
M481_RS12645	SM00319	Homologues of the ligand binding domain of Tar
M481_RS12650	SM00138	Methyltransferase, chemotaxis proteins 
M481_RS12660	SM00448	cheY-homologous receiver domain
M481_RS12675	SM00644	M481_RS12675
M481_RS12695	SM01005	Alanine racemase, C-terminal domain
M481_RS12720	SM00382	ATPases associated with a variety of cellular activities
M481_RS12730	SM01022	M481_RS12730
M481_RS12740	SM00972	Spore Coat Protein U domain
M481_RS12755	SM00972	Spore Coat Protein U domain
M481_RS12760	SM00972	Spore Coat Protein U domain
M481_RS12765	SM00972	Spore Coat Protein U domain
M481_RS12785	SM00945	ProQ/FINO family
M481_RS12790	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
M481_RS12790	SM00245	tail specific protease
M481_RS12805	SM01321	M481_RS12805
M481_RS12845	SM00346	helix_turn_helix isocitrate lyase regulation
M481_RS12850	SM00644	M481_RS12850
M481_RS12875	SM00382	ATPases associated with a variety of cellular activities
M481_RS12945	SM00382	ATPases associated with a variety of cellular activities
M481_RS12980	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
M481_RS13005	SM00873	B3/4 domain
M481_RS13005	SM00874	tRNA synthetase B5 domain
M481_RS13005	SM00896	Ferredoxin-fold anticodon binding domain
M481_RS13010	SM00411	bacterial (prokaryotic) histone like domain
M481_RS13030	SM00382	ATPases associated with a variety of cellular activities
M481_RS13130	SM00382	ATPases associated with a variety of cellular activities
M481_RS13155	SM00382	ATPases associated with a variety of cellular activities
M481_RS13165	SM01321	M481_RS13165
M481_RS13220	SM00354	helix_turn _helix lactose operon repressor
M481_RS13245	SM00479	M481_RS13245
M481_RS13285	SM00347	helix_turn_helix multiple antibiotic resistance protein
M481_RS13310	SM00363	S4 RNA-binding domain
M481_RS13345	SM00382	ATPases associated with a variety of cellular activities
M481_RS13350	SM00382	ATPases associated with a variety of cellular activities
M481_RS13380	SM01321	M481_RS13380
M481_RS13385	SM00382	ATPases associated with a variety of cellular activities
M481_RS13420	SM00953	M481_RS13420
M481_RS13430	SM00091	PAS domain
M481_RS13430	SM00382	ATPases associated with a variety of cellular activities
M481_RS13435	SM01321	M481_RS13435
M481_RS13440	SM00382	ATPases associated with a variety of cellular activities
M481_RS13455	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
M481_RS13480	SM00422	helix_turn_helix, mercury resistance
M481_RS13495	SM00890	Domain of unknown function
M481_RS13555	SM00382	ATPases associated with a variety of cellular activities
M481_RS13555	SM00487	DEAD-like helicases superfamily
M481_RS13555	SM00490	helicase superfamily c-terminal domain
M481_RS13555	SM00847	Helicase associated domain (HA2)  Add an annotation
M481_RS13565	SM00530	Helix-turn-helix XRE-family like proteins 
M481_RS13570	SM00020	Trypsin-like serine protease
M481_RS13590	SM00867	YceI-like domain 
M481_RS13615	SM01321	M481_RS13615
M481_RS13625	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
M481_RS13625	SM00387	Histidine kinase-like ATPases
M481_RS13625	SM00388	His Kinase A (phosphoacceptor) domain
M481_RS13630	SM00448	cheY-homologous receiver domain
M481_RS13630	SM00862	Transcriptional regulatory protein, C terminal
M481_RS13655	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
M481_RS13655	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
M481_RS13670	SM00100	Cyclic nucleotide-monophosphate binding domain
M481_RS13670	SM00419	helix_turn_helix, cAMP Regulatory protein
M481_RS13680	SM00098	Alkaline phosphatase homologues
M481_RS13735	SM00382	ATPases associated with a variety of cellular activities
M481_RS13760	SM00354	helix_turn _helix lactose operon repressor
M481_RS13835	SM00342	helix_turn_helix, arabinose operon control protein
M481_RS13845	SM00382	ATPases associated with a variety of cellular activities
M481_RS13865	SM00382	ATPases associated with a variety of cellular activities
M481_RS13910	SM00342	helix_turn_helix, arabinose operon control protein
M481_RS13920	SM00900	M481_RS13920
M481_RS13930	SM00478	endonuclease III
M481_RS13930	SM00525	M481_RS13930
M481_RS13945	SM00357	Cold shock protein domain
M481_RS13945	SM00955	M481_RS13945
M481_RS13970	SM01007	Class II Aldolase and Adducin N-terminal domain
M481_RS13985	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
M481_RS13995	SM00028	Tetratricopeptide repeats
M481_RS14005	SM00014	Acid phosphatase homologues
M481_RS14030	SM01321	M481_RS14030
M481_RS14040	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
M481_RS14040	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
M481_RS14040	SM00493	M481_RS14040
M481_RS14060	SM00822	M481_RS14060
M481_RS14070	SM00363	S4 RNA-binding domain
M481_RS14080	SM00481	DNA polymerase alpha chain like domain
M481_RS14125	SM00749	bacterial OsmY and nodulation domain
M481_RS14195	SM00155	Phospholipase D. Active site motifs.
M481_RS14210	SM00382	ATPases associated with a variety of cellular activities
M481_RS14215	SM00382	ATPases associated with a variety of cellular activities
M481_RS14250	SM00528	Domain in histone-like proteins of HNS family
M481_RS14265	SM00448	cheY-homologous receiver domain
M481_RS14310	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
M481_RS14310	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
M481_RS14310	SM00493	M481_RS14310
M481_RS14330	SM00870	M481_RS14330
M481_RS14350	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
M481_RS14365	SM00763	PrkA AAA domain
M481_RS14405	SM00345	helix_turn_helix gluconate operon transcriptional repressor
M481_RS14460	SM00060	Fibronectin type 3 domain
M481_RS14490	SM01040	BRO family, N-terminal domain
M481_RS14510	SM00232	JAB/MPN domain
M481_RS14520	SM01321	M481_RS14520
M481_RS14550	SM00635	Bacterial Ig-like domain 2
M481_RS14580	SM00635	Bacterial Ig-like domain 2
M481_RS14655	SM01040	BRO family, N-terminal domain
M481_RS14690	SM00382	ATPases associated with a variety of cellular activities
M481_RS14740	SM00341	Helicase and RNase D C-terminal
M481_RS14740	SM00474	3'-5' exonuclease
M481_RS14760	SM00487	DEAD-like helicases superfamily
M481_RS14760	SM00491	M481_RS14760
M481_RS14805	SM00257	Lysin motif
M481_RS14815	SM00382	ATPases associated with a variety of cellular activities
M481_RS14825	SM00382	ATPases associated with a variety of cellular activities
M481_RS14830	SM00278	Helix-hairpin-helix DNA-binding motif class 1
M481_RS14885	SM00836	DALR anticodon binding domain
M481_RS14885	SM01016	Arginyl tRNA synthetase N terminal dom
M481_RS14930	SM00481	DNA polymerase alpha chain like domain
M481_RS14955	SM01321	M481_RS14955
M481_RS15020	SM00937	M481_RS15020
M481_RS15045	SM01400	M481_RS15045
M481_RS15080	SM00450	Rhodanese Homology Domain
M481_RS15115	SM00448	cheY-homologous receiver domain
M481_RS15135	SM00862	Transcriptional regulatory protein, C terminal
M481_RS15140	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
M481_RS15140	SM00387	Histidine kinase-like ATPases
M481_RS15140	SM00388	His Kinase A (phosphoacceptor) domain
M481_RS15195	SM00671	Sel1-like repeats.
M481_RS15200	SM00671	Sel1-like repeats.
M481_RS15280	SM00345	helix_turn_helix gluconate operon transcriptional repressor
M481_RS15280	SM00866	M481_RS15280
M481_RS15350	SM00345	helix_turn_helix gluconate operon transcriptional repressor
M481_RS15355	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
M481_RS15355	SM00387	Histidine kinase-like ATPases
M481_RS15420	SM00382	ATPases associated with a variety of cellular activities
M481_RS15460	SM00420	helix_turn_helix, Deoxyribose operon repressor
M481_RS15460	SM01134	M481_RS15460
M481_RS15525	SM00421	helix_turn_helix, Lux Regulon
M481_RS15525	SM00448	cheY-homologous receiver domain
M481_RS15530	SM00062	Bacterial periplasmic substrate-binding proteins
M481_RS15530	SM00387	Histidine kinase-like ATPases
M481_RS15530	SM00388	His Kinase A (phosphoacceptor) domain
M481_RS15530	SM00448	cheY-homologous receiver domain
M481_RS15590	SM00382	ATPases associated with a variety of cellular activities
M481_RS15595	SM00382	ATPases associated with a variety of cellular activities
M481_RS15600	SM00342	helix_turn_helix, arabinose operon control protein
M481_RS15605	SM00823	Phosphopantetheine attachment site
M481_RS15610	SM00822	M481_RS15610
M481_RS15610	SM00823	Phosphopantetheine attachment site
M481_RS15610	SM00824	Thioesterase
M481_RS15610	SM00825	Beta-ketoacyl synthase
M481_RS15610	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
M481_RS15665	SM00382	ATPases associated with a variety of cellular activities
M481_RS15700	SM00382	ATPases associated with a variety of cellular activities
M481_RS15730	SM00345	helix_turn_helix gluconate operon transcriptional repressor
M481_RS15730	SM00866	M481_RS15730
M481_RS15865	SM00278	Helix-hairpin-helix DNA-binding motif class 1
M481_RS15865	SM00465	GIY-YIG type nucleases (URI domain)
M481_RS15870	SM00421	helix_turn_helix, Lux Regulon
M481_RS15870	SM00448	cheY-homologous receiver domain
M481_RS15955	SM00382	ATPases associated with a variety of cellular activities
M481_RS16010	SM00342	helix_turn_helix, arabinose operon control protein
M481_RS16015	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
M481_RS16020	SM00478	endonuclease III
M481_RS16055	SM00382	ATPases associated with a variety of cellular activities
M481_RS16125	SM00382	ATPases associated with a variety of cellular activities
M481_RS16140	SM01007	Class II Aldolase and Adducin N-terminal domain
M481_RS16160	SM00047	Lysozyme subfamily 2
M481_RS16205	SM00858	M481_RS16205
M481_RS16220	SM00634	Bacterial Ig-like domain (group 1)
M481_RS16225	SM01321	M481_RS16225
M481_RS16305	SM01022	M481_RS16305
M481_RS16315	SM00487	DEAD-like helicases superfamily
M481_RS16315	SM00490	helicase superfamily c-terminal domain
M481_RS16345	SM00903	Flavin reductase like domain
M481_RS16395	SM00347	helix_turn_helix multiple antibiotic resistance protein
M481_RS16435	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
M481_RS16435	SM00091	PAS domain
M481_RS16435	SM00267	diguanylate cyclase
M481_RS16455	SM00357	Cold shock protein domain
M481_RS16510	SM00342	helix_turn_helix, arabinose operon control protein
M481_RS16520	SM00382	ATPases associated with a variety of cellular activities
M481_RS16525	SM01321	M481_RS16525
M481_RS16535	SM00090	RIO-like kinase
M481_RS16555	SM00354	helix_turn _helix lactose operon repressor
M481_RS16595	SM00421	helix_turn_helix, Lux Regulon
M481_RS16595	SM00448	cheY-homologous receiver domain
M481_RS16640	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
M481_RS16665	SM00634	Bacterial Ig-like domain (group 1)
M481_RS16710	SM00382	ATPases associated with a variety of cellular activities
M481_RS16770	SM01350	M481_RS16770
M481_RS16810	SM00382	ATPases associated with a variety of cellular activities
M481_RS16820	SM01006	Siderophore biosynthesis protein domain
M481_RS16840	SM01091	Transporter associated domain
M481_RS16870	SM01321	M481_RS16870
M481_RS16915	SM00919	Malic enzyme, NAD binding domain
M481_RS16915	SM01274	M481_RS16915
M481_RS16935	SM00382	ATPases associated with a variety of cellular activities
M481_RS16945	SM00382	ATPases associated with a variety of cellular activities
M481_RS16975	SM00829	Enoylreductase
M481_RS17000	SM00382	ATPases associated with a variety of cellular activities
M481_RS17010	SM00852	Probable molybdopterin binding domain
M481_RS17025	SM00382	ATPases associated with a variety of cellular activities
M481_RS17120	SM00382	ATPases associated with a variety of cellular activities
M481_RS17120	SM01086	C-terminal, D2-small domain, of ClpB protein
M481_RS17160	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
M481_RS17200	SM00825	Beta-ketoacyl synthase
M481_RS17260	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
M481_RS17265	SM00992	Hemimethylated DNA-binding protein YccV like
M481_RS17270	SM00881	CoA binding domain
M481_RS17280	SM00851	MGS-like domain
M481_RS17320	SM01321	M481_RS17320
M481_RS17355	SM00382	ATPases associated with a variety of cellular activities
M481_RS17360	SM00825	Beta-ketoacyl synthase
M481_RS17365	SM01321	M481_RS17365
M481_RS17395	SM00358	Double-stranded RNA binding motif
M481_RS17395	SM00535	Ribonuclease III family
M481_RS17445	SM00487	DEAD-like helicases superfamily
M481_RS17445	SM00490	helicase superfamily c-terminal domain
M481_RS17450	SM00248	ankyrin repeats
M481_RS17470	SM00986	Uracil DNA glycosylase superfamily
M481_RS17470	SM00987	UreE urease accessory protein, C-terminal domain 
M481_RS17495	SM00797	Allophanate hydrolase subunit 2
M481_RS17560	SM00448	cheY-homologous receiver domain
M481_RS17560	SM00862	Transcriptional regulatory protein, C terminal
M481_RS17605	SM00342	helix_turn_helix, arabinose operon control protein
M481_RS17680	SM00988	UreE urease accessory protein, N-terminal domain
M481_RS17700	SM00382	ATPases associated with a variety of cellular activities
M481_RS17705	SM00382	ATPases associated with a variety of cellular activities
M481_RS17725	SM00357	Cold shock protein domain
M481_RS17770	SM00382	ATPases associated with a variety of cellular activities
M481_RS17805	SM00479	M481_RS17805
M481_RS17820	SM00849	Metallo-beta-lactamase superfamily
M481_RS17825	SM00257	Lysin motif
M481_RS17875	SM00382	ATPases associated with a variety of cellular activities
M481_RS17875	SM00930	M481_RS17875
M481_RS17915	SM01322	M481_RS17915
M481_RS17935	SM00977	TilS substrate C-terminal domain
M481_RS17950	SM00481	DNA polymerase alpha chain like domain
M481_RS17980	SM00935	Outer membrane protein (OmpH-like)
M481_RS17990	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
M481_RS18035	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
M481_RS18065	SM01321	M481_RS18065
M481_RS18085	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
M481_RS18085	SM00475	5'-3' exonuclease
M481_RS18120	SM00925	MltA specific insert domain
M481_RS18140	SM00646	M481_RS18140
M481_RS18155	SM00382	ATPases associated with a variety of cellular activities
M481_RS18220	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
M481_RS18240	SM00927	DNA mismatch repair enzyme MutH
M481_RS18265	SM00563	Phosphate acyltransferases
M481_RS18275	SM00354	helix_turn _helix lactose operon repressor
M481_RS18300	SM00849	Metallo-beta-lactamase superfamily
M481_RS18310	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
M481_RS18310	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
M481_RS18310	SM00319	Homologues of the ligand binding domain of Tar
M481_RS18390	SM00382	ATPases associated with a variety of cellular activities
M481_RS18410	SM00947	Carbonic anhydrase
M481_RS18430	SM00869	Autotransporter beta-domain
M481_RS18440	SM00382	ATPases associated with a variety of cellular activities
M481_RS18450	SM01321	M481_RS18450
M481_RS18460	SM00420	helix_turn_helix, Deoxyribose operon repressor
M481_RS18460	SM01134	M481_RS18460
M481_RS18540	SM00354	helix_turn _helix lactose operon repressor
M481_RS18555	SM00354	helix_turn _helix lactose operon repressor
M481_RS18595	SM00382	ATPases associated with a variety of cellular activities
M481_RS18600	SM00382	ATPases associated with a variety of cellular activities
M481_RS18715	SM00778	Zinc-binding domain of primase-helicase
M481_RS18715	SM00885	D5 N terminal like
M481_RS18720	SM00530	Helix-turn-helix XRE-family like proteins 
M481_RS18730	SM00530	Helix-turn-helix XRE-family like proteins 
M481_RS18765	SM00937	M481_RS18765
M481_RS18795	SM00387	Histidine kinase-like ATPases
M481_RS18795	SM00388	His Kinase A (phosphoacceptor) domain
M481_RS18800	SM00448	cheY-homologous receiver domain
M481_RS18800	SM00862	Transcriptional regulatory protein, C terminal
M481_RS18875	SM01011	Aminopeptidase P, N-terminal domain
M481_RS18895	SM01321	M481_RS18895
M481_RS18950	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
M481_RS18955	SM01321	M481_RS18955
M481_RS18960	SM00861	Transketolase, pyrimidine binding domain
M481_RS18985	SM00731	SprT homologues.
M481_RS19010	SM00732	Likely ribonuclease with RNase H fold.
M481_RS19025	SM00382	ATPases associated with a variety of cellular activities
M481_RS19045	SM01152	M481_RS19045
M481_RS19055	SM00729	Elongator protein 3, MiaB family, Radical SAM
M481_RS19090	SM00478	endonuclease III
M481_RS19090	SM00525	M481_RS19090
M481_RS19120	SM00382	ATPases associated with a variety of cellular activities
M481_RS19175	SM00382	ATPases associated with a variety of cellular activities
M481_RS19175	SM01086	C-terminal, D2-small domain, of ClpB protein
M481_RS19240	SM00421	helix_turn_helix, Lux Regulon
M481_RS19270	SM01006	Siderophore biosynthesis protein domain
M481_RS19400	SM00862	Transcriptional regulatory protein, C terminal
M481_RS19470	SM00858	M481_RS19470
M481_RS19490	SM00382	ATPases associated with a variety of cellular activities
M481_RS19515	SM00382	ATPases associated with a variety of cellular activities
M481_RS19585	SM01321	M481_RS19585
M481_RS19675	SM00342	helix_turn_helix, arabinose operon control protein
M481_RS19705	SM00563	Phosphate acyltransferases
M481_RS19710	SM00434	DNA Topoisomerase IV
M481_RS19730	SM00387	Histidine kinase-like ATPases
M481_RS19730	SM00433	TopoisomeraseII
M481_RS19810	SM01118	M481_RS19810
M481_RS19815	SM00287	Bacterial SH3 domain homologues
M481_RS19820	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
M481_RS19830	SM00905	Dihydroneopterin aldolase
M481_RS19835	SM01207	M481_RS19835
M481_RS19850	SM00400	zinc finger
M481_RS19850	SM00493	M481_RS19850
M481_RS19850	SM00766	DNA primase DnaG DnaB-binding
M481_RS19920	SM00382	ATPases associated with a variety of cellular activities
M481_RS20000	SM01217	M481_RS20000
M481_RS20025	SM00354	helix_turn _helix lactose operon repressor
M481_RS20035	SM00382	ATPases associated with a variety of cellular activities
M481_RS20050	SM00869	Autotransporter beta-domain
M481_RS20080	SM00912	haemagglutination activity domain
M481_RS20090	SM00327	von Willebrand factor (vWF) type A domain
M481_RS20100	SM00327	von Willebrand factor (vWF) type A domain
M481_RS20115	SM00220	Serine/Threonine protein kinases, catalytic domain
M481_RS20140	SM00869	Autotransporter beta-domain
M481_RS20160	SM01321	M481_RS20160
M481_RS20170	SM00858	M481_RS20170
M481_RS20195	SM00345	helix_turn_helix gluconate operon transcriptional repressor
M481_RS20195	SM00895	M481_RS20195
M481_RS20280	SM00749	bacterial OsmY and nodulation domain
M481_RS20300	SM00073	Histidine Phosphotransfer domain
M481_RS20300	SM00091	PAS domain
M481_RS20300	SM00387	Histidine kinase-like ATPases
M481_RS20300	SM00388	His Kinase A (phosphoacceptor) domain
M481_RS20300	SM00448	cheY-homologous receiver domain
M481_RS20310	SM00729	Elongator protein 3, MiaB family, Radical SAM
M481_RS20365	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
M481_RS20370	SM01321	M481_RS20370
M481_RS20375	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
M481_RS20410	SM00382	ATPases associated with a variety of cellular activities
M481_RS20420	SM00116	Domain in cystathionine beta-synthase and other proteins.
M481_RS20440	SM00382	ATPases associated with a variety of cellular activities
M481_RS20490	SM00354	helix_turn _helix lactose operon repressor
M481_RS20500	SM00642	Alpha-amylase domain
M481_RS20630	SM00316	Ribosomal protein S1-like RNA-binding domain
M481_RS20655	SM00052	Putative diguanylate phosphodiesterase
M481_RS20655	SM00267	diguanylate cyclase
M481_RS20660	SM00829	Enoylreductase
M481_RS20685	SM00878	Biotin carboxylase C-terminal domain
M481_RS20720	SM00345	helix_turn_helix gluconate operon transcriptional repressor
M481_RS20720	SM00895	M481_RS20720
M481_RS20740	SM00849	Metallo-beta-lactamase superfamily
M481_RS20755	SM00357	Cold shock protein domain
M481_RS20760	SM00357	Cold shock protein domain
M481_RS20765	SM01321	M481_RS20765
M481_RS20810	SM00382	ATPases associated with a variety of cellular activities
M481_RS20845	SM00382	ATPases associated with a variety of cellular activities
M481_RS20860	SM00062	Bacterial periplasmic substrate-binding proteins
M481_RS20870	SM01133	M481_RS20870
M481_RS20885	SM00342	helix_turn_helix, arabinose operon control protein
M481_RS20920	SM00530	Helix-turn-helix XRE-family like proteins 
M481_RS20935	SM00860	SMI1 / KNR4 family
M481_RS20990	SM00382	ATPases associated with a variety of cellular activities
M481_RS20990	SM01086	C-terminal, D2-small domain, of ClpB protein
M481_RS21075	SM00382	ATPases associated with a variety of cellular activities
M481_RS21125	SM01018	B12 binding domain
M481_RS21130	SM00346	helix_turn_helix isocitrate lyase regulation
M481_RS21195	SM00382	ATPases associated with a variety of cellular activities
M481_RS21195	SM01086	C-terminal, D2-small domain, of ClpB protein
M481_RS21205	SM00363	S4 RNA-binding domain
M481_RS21220	SM01321	M481_RS21220
M481_RS21230	SM00830	Chorismate mutase type II
M481_RS21235	SM00830	Chorismate mutase type II
M481_RS21245	SM00382	ATPases associated with a variety of cellular activities
M481_RS21255	SM01321	M481_RS21255
M481_RS21280	SM01240	M481_RS21280
M481_RS21305	SM00644	M481_RS21305
M481_RS21320	SM00345	helix_turn_helix gluconate operon transcriptional repressor
M481_RS21320	SM00895	M481_RS21320
M481_RS21345	SM01321	M481_RS21345
M481_RS21390	SM00947	Carbonic anhydrase
M481_RS21395	SM00382	ATPases associated with a variety of cellular activities
M481_RS21455	SM00487	DEAD-like helicases superfamily
M481_RS21455	SM00490	helicase superfamily c-terminal domain
M481_RS21455	SM00847	Helicase associated domain (HA2)  Add an annotation
M481_RS21510	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
M481_RS21515	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
M481_RS21520	SM00073	Histidine Phosphotransfer domain
M481_RS21520	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
M481_RS21520	SM00387	Histidine kinase-like ATPases
M481_RS21520	SM00388	His Kinase A (phosphoacceptor) domain
M481_RS21520	SM00448	cheY-homologous receiver domain
M481_RS21525	SM00954	Region found in RelA / SpoT proteins
M481_RS21545	SM01192	M481_RS21545
M481_RS21545	SM01193	M481_RS21545
M481_RS21650	SM00257	Lysin motif
M481_RS21660	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
M481_RS21660	SM00534	ATPase domain of DNA mismatch repair MUTS family
M481_RS21675	SM00829	Enoylreductase
M481_RS21690	SM01120	M481_RS21690
M481_RS21705	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
M481_RS21720	SM00062	Bacterial periplasmic substrate-binding proteins
M481_RS21725	SM01235	M481_RS21725
M481_RS21785	SM00382	ATPases associated with a variety of cellular activities
M481_RS21795	SM00420	helix_turn_helix, Deoxyribose operon repressor
M481_RS21795	SM01134	M481_RS21795
M481_RS21800	SM01007	Class II Aldolase and Adducin N-terminal domain
M481_RS21805	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
M481_RS21850	SM00382	ATPases associated with a variety of cellular activities
M481_RS21865	SM00861	Transketolase, pyrimidine binding domain
M481_RS21900	SM00382	ATPases associated with a variety of cellular activities
M481_RS21910	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
M481_RS21955	SM01091	Transporter associated domain
M481_RS21965	SM00382	ATPases associated with a variety of cellular activities
M481_RS21965	SM00962	SRP54-type protein, GTPase domain
M481_RS21965	SM00963	SRP54-type protein, helical bundle domain
M481_RS22000	SM00448	cheY-homologous receiver domain
M481_RS22000	SM00850	LytTr DNA-binding domain
M481_RS22015	SM00382	ATPases associated with a variety of cellular activities
M481_RS22025	SM00957	SecA DEAD-like domain
M481_RS22025	SM00958	SecA preprotein cross-linking domain
