M478_RS00055 PF04962 KduI/IolB family M478_RS00070 PF00664 ABC transporter transmembrane region M478_RS00360 PF00728 Glycosyl hydrolase family 20, catalytic domain M478_RS00360 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain M478_RS00440 PF02867 Ribonucleotide reductase, barrel domain M478_RS00705 PF03099 Biotin/lipoate A/B protein ligase family M478_RS00845 PF02562 PhoH-like protein M478_RS00850 PF02562 PhoH-like protein M478_RS00895 PF13344 Haloacid dehalogenase-like hydrolase M478_RS00935 PF01797 Transposase IS200 like M478_RS00960 PF03573 outer membrane porin, OprD family M478_RS00985 PF01475 Ferric uptake regulator family M478_RS01035 PF13407 Periplasmic binding protein domain M478_RS01040 PF00005 ABC transporter M478_RS01045 PF02653 M478_RS01045 M478_RS01050 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M478_RS01050 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M478_RS01055 PF00294 pfkB family carbohydrate kinase M478_RS01055 PF09863 Uncharacterized protein conserved in bacteria (DUF2090) M478_RS01060 PF01261 Xylose isomerase-like TIM barrel M478_RS01065 PF04962 KduI/IolB family M478_RS01075 PF00005 ABC transporter M478_RS01075 PF00664 ABC transporter transmembrane region M478_RS01080 PF03992 Antibiotic biosynthesis monooxygenase M478_RS01085 PF08971 Glycogen synthesis protein M478_RS01100 PF00196 Bacterial regulatory proteins, luxR family M478_RS01105 PF00313 'Cold-shock' DNA-binding domain M478_RS01110 PF00313 'Cold-shock' DNA-binding domain M478_RS01115 PF02537 M478_RS01115 M478_RS01125 PF02416 mttA/Hcf106 family M478_RS01130 PF04055 Radical SAM superfamily M478_RS01130 PF16881 M478_RS01130 M478_RS01135 PF03099 Biotin/lipoate A/B protein ligase family M478_RS01140 PF04359 Protein of unknown function (DUF493) M478_RS01145 PF00768 D-alanyl-D-alanine carboxypeptidase M478_RS01145 PF07943 Penicillin-binding protein 5, C-terminal domain M478_RS01150 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel M478_RS01150 PF05036 Sporulation related domain M478_RS01155 PF01098 M478_RS01155 M478_RS01160 PF00905 Penicillin binding protein transpeptidase domain M478_RS01160 PF03717 Penicillin-binding Protein dimerisation domain M478_RS01165 PF02590 Predicted SPOUT methyltransferase M478_RS01170 PF02410 Oligomerisation domain M478_RS01175 PF01467 Cytidylyltransferase M478_RS01180 PF06144 DNA polymerase III, delta subunit M478_RS01180 PF14840 Processivity clamp loader gamma complex DNA pol III C-term M478_RS01185 PF04390 Lipopolysaccharide-assembly M478_RS01190 PF00133 tRNA synthetases class I (I, L, M and V) M478_RS01190 PF08264 Anticodon-binding domain of tRNA M478_RS01190 PF13603 Leucyl-tRNA synthetase, Domain 2 M478_RS01195 PF07295 M478_RS01195 M478_RS01200 PF00005 ABC transporter M478_RS01205 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS01210 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS01215 PF00497 Bacterial extracellular solute-binding proteins, family 3 M478_RS01220 PF00795 Carbon-nitrogen hydrolase M478_RS01225 PF00571 CBS domain M478_RS01225 PF03471 Transporter associated domain M478_RS01230 PF02130 Uncharacterized protein family UPF0054 M478_RS01235 PF02562 PhoH-like protein M478_RS01240 PF00919 Uncharacterized protein family UPF0004 M478_RS01240 PF01938 TRAM domain M478_RS01240 PF04055 Radical SAM superfamily M478_RS01245 PF01494 FAD binding domain M478_RS01285 PF00733 Asparagine synthase M478_RS01285 PF13537 Glutamine amidotransferase domain M478_RS01290 PF13242 HAD-hyrolase-like M478_RS01290 PF13344 Haloacid dehalogenase-like hydrolase M478_RS01295 PF00480 ROK family M478_RS01295 PF01047 MarR family M478_RS01300 PF01979 Amidohydrolase family M478_RS01305 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase M478_RS01310 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M478_RS01310 PF00367 phosphotransferase system, EIIB M478_RS01310 PF02378 Phosphotransferase system, EIIC M478_RS01315 PF01797 Transposase IS200 like M478_RS01320 PF00749 tRNA synthetases class I (E and Q), catalytic domain M478_RS01320 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain M478_RS01325 PF03573 outer membrane porin, OprD family M478_RS01335 PF01475 Ferric uptake regulator family M478_RS01340 PF00258 Flavodoxin M478_RS01345 PF01402 Ribbon-helix-helix protein, copG family M478_RS01355 PF12697 Alpha/beta hydrolase family M478_RS01370 PF01527 Transposase M478_RS01375 PF13356 Domain of unknown function (DUF4102) M478_RS01380 PF01695 IstB-like ATP binding protein M478_RS01385 PF00665 Integrase core domain M478_RS01385 PF02796 Helix-turn-helix domain of resolvase M478_RS01390 PF01522 Polysaccharide deacetylase M478_RS01395 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M478_RS01400 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS01405 PF00005 ABC transporter M478_RS01405 PF00571 CBS domain M478_RS01410 PF00268 Ribonucleotide reductase, small chain M478_RS01415 PF00317 Ribonucleotide reductase, all-alpha domain M478_RS01415 PF02867 Ribonucleotide reductase, barrel domain M478_RS01415 PF08343 Ribonucleotide reductase N-terminal M478_RS01420 PF07972 NrdI Flavodoxin like M478_RS01425 PF00462 Glutaredoxin M478_RS01430 PF06392 M478_RS01430 M478_RS01435 PF09400 Protein of unknown function (DUF2002) M478_RS01440 PF06711 M478_RS01440 M478_RS01445 PF04899 M478_RS01445 M478_RS01450 PF00313 'Cold-shock' DNA-binding domain M478_RS01455 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M478_RS01460 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS01465 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS01470 PF00005 ABC transporter M478_RS01475 PF00005 ABC transporter M478_RS01480 PF00547 Urease, gamma subunit M478_RS01485 PF00699 Urease beta subunit M478_RS01490 PF00449 Urease alpha-subunit, N-terminal domain M478_RS01490 PF01979 Amidohydrolase family M478_RS01495 PF02814 UreE urease accessory protein, N-terminal domain M478_RS01495 PF05194 UreE urease accessory protein, C-terminal domain M478_RS01500 PF01730 UreF M478_RS01505 PF02492 CobW/HypB/UreG, nucleotide-binding domain M478_RS01510 PF01774 UreD urease accessory protein M478_RS01515 PF03253 Urea transporter M478_RS01520 PF03824 M478_RS01520 M478_RS01525 PF06411 HdeA/HdeB family M478_RS01535 PF02254 TrkA-N domain M478_RS01535 PF07885 Ion channel M478_RS01540 PF02537 M478_RS01540 M478_RS01545 PF02537 M478_RS01545 M478_RS01555 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M478_RS01560 PF02378 Phosphotransferase system, EIIC M478_RS01565 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit M478_RS01570 PF07883 Cupin domain M478_RS01570 PF12833 Helix-turn-helix domain M478_RS01575 PF04794 YdjC-like protein M478_RS01590 PF03925 SeqA protein M478_RS01595 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M478_RS01595 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M478_RS01595 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M478_RS01595 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M478_RS01610 PF00892 EamA-like transporter family M478_RS01615 PF00072 Response regulator receiver domain M478_RS01615 PF00486 Transcriptional regulatory protein, C terminal M478_RS01620 PF00512 His Kinase A (phospho-acceptor) domain M478_RS01620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M478_RS01620 PF02702 Osmosensitive K+ channel His kinase sensor domain M478_RS01620 PF13492 GAF domain M478_RS01620 PF13493 Domain of unknown function (DUF4118) M478_RS01625 PF02669 M478_RS01625 M478_RS01630 PF00122 E1-E2 ATPase M478_RS01630 PF00702 haloacid dehalogenase-like hydrolase M478_RS01635 PF03814 M478_RS01635 M478_RS01640 PF09604 M478_RS01640 M478_RS01650 PF10725 M478_RS01650 M478_RS01655 PF08349 M478_RS01655 M478_RS01660 PF00875 DNA photolyase M478_RS01660 PF03441 FAD binding domain of DNA photolyase M478_RS01665 PF02112 M478_RS01665 M478_RS01670 PF01784 NIF3 (NGG1p interacting factor 3) M478_RS01680 PF02626 Allophanate hydrolase subunit 2 M478_RS01685 PF03746 LamB/YcsF family M478_RS01690 PF06149 M478_RS01690 M478_RS01695 PF06166 M478_RS01695 M478_RS01700 PF06166 M478_RS01700 M478_RS01705 PF01470 Pyroglutamyl peptidase M478_RS01710 PF03167 Uracil DNA glycosylase superfamily M478_RS01715 PF01228 Glycine radical M478_RS01720 PF11187 Protein of unknown function (DUF2974) M478_RS01735 PF00270 DEAD/DEAH box helicase M478_RS01735 PF00271 Helicase conserved C-terminal domain M478_RS01740 PF05175 Methyltransferase small domain M478_RS01745 PF00890 FAD binding domain M478_RS01745 PF02910 Fumarate reductase flavoprotein C-term M478_RS01750 PF04542 Sigma-70 region 2 M478_RS01750 PF08281 Sigma-70, region 4 M478_RS01755 PF03872 Anti sigma-E protein RseA, N-terminal domain M478_RS01755 PF03873 Anti sigma-E protein RseA, C-terminal domain M478_RS01760 PF03888 MucB/RseB family M478_RS01760 PF17188 M478_RS01760 M478_RS01765 PF04246 M478_RS01765 M478_RS01775 PF00009 Elongation factor Tu GTP binding domain M478_RS01775 PF00679 Elongation factor G C-terminus M478_RS01775 PF03144 Elongation factor Tu domain 2 M478_RS01775 PF06421 GTP-binding protein LepA C-terminus M478_RS01780 PF00717 Peptidase S24-like M478_RS01780 PF10502 Signal peptidase, peptidase S26 M478_RS01785 PF00035 Double-stranded RNA binding motif M478_RS01785 PF14622 Ribonuclease-III-like M478_RS01790 PF01926 50S ribosome-binding GTPase M478_RS01790 PF07650 KH domain M478_RS01795 PF02565 Recombination protein O C terminal M478_RS01795 PF11967 Recombination protein O N terminal M478_RS01800 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ M478_RS01805 PF01648 4'-phosphopantetheinyl transferase superfamily M478_RS01815 PF01797 Transposase IS200 like M478_RS01820 PF12838 4Fe-4S dicluster domain M478_RS01825 PF01380 SIS domain M478_RS01825 PF01418 Helix-turn-helix domain, rpiR family M478_RS01830 PF01380 SIS domain M478_RS01835 PF12710 haloacid dehalogenase-like hydrolase M478_RS01840 PF14437 M478_RS01840 M478_RS01845 PF00497 Bacterial extracellular solute-binding proteins, family 3 M478_RS01845 PF01464 Transglycosylase SLT domain M478_RS01850 PF02769 AIR synthase related protein, C-terminal domain M478_RS01850 PF13507 CobB/CobQ-like glutamine amidotransferase domain M478_RS01870 PF01797 Transposase IS200 like M478_RS01875 PF00512 His Kinase A (phospho-acceptor) domain M478_RS01875 PF00672 HAMP domain M478_RS01875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M478_RS01880 PF13942 M478_RS01880 M478_RS01885 PF00072 Response regulator receiver domain M478_RS01885 PF00158 Sigma-54 interaction domain M478_RS01890 PF00795 Carbon-nitrogen hydrolase M478_RS01890 PF02540 NAD synthase M478_RS01895 PF00543 Nitrogen regulatory protein P-II M478_RS01900 PF14503 YhfZ C-terminal domain M478_RS01905 PF14503 YhfZ C-terminal domain M478_RS01910 PF00665 Integrase core domain M478_RS01910 PF02796 Helix-turn-helix domain of resolvase M478_RS01915 PF01695 IstB-like ATP binding protein M478_RS01920 PF00042 Globin M478_RS01920 PF00175 Oxidoreductase NAD-binding domain M478_RS01920 PF00970 Oxidoreductase FAD-binding domain M478_RS01925 PF00464 Serine hydroxymethyltransferase M478_RS01935 PF13505 Outer membrane protein beta-barrel domain M478_RS01940 PF12832 MFS_1 like family M478_RS01945 PF00874 PRD domain M478_RS01950 PF06226 M478_RS01950 M478_RS01955 PF03824 M478_RS01955 M478_RS01960 PF00459 Inositol monophosphatase family M478_RS01965 PF00588 SpoU rRNA Methylase family M478_RS01970 PF02082 Transcriptional regulator M478_RS01975 PF00266 Aminotransferase class-V M478_RS01980 PF01592 NifU-like N terminal domain M478_RS01985 PF01521 Iron-sulphur cluster biosynthesis M478_RS01990 PF00226 DnaJ domain M478_RS01990 PF07743 HSCB C-terminal oligomerisation domain M478_RS01995 PF00012 Hsp70 protein M478_RS02000 PF00111 2Fe-2S iron-sulfur cluster binding domain M478_RS02005 PF04384 Iron-sulphur cluster assembly M478_RS02010 PF00883 Cytosol aminopeptidase family, catalytic domain M478_RS02010 PF12404 M478_RS02010 M478_RS02015 PF07179 M478_RS02015 M478_RS02015 PF14581 M478_RS02015 M478_RS02020 PF03797 Autotransporter beta-domain M478_RS02025 PF03212 Pertactin M478_RS02025 PF03797 Autotransporter beta-domain M478_RS02030 PF03212 Pertactin M478_RS02030 PF03797 Autotransporter beta-domain M478_RS02040 PF00030 Beta/Gamma crystallin M478_RS02040 PF08964 Beta/Gamma crystallin M478_RS02040 PF09101 Exotoxin A binding M478_RS02045 PF00334 Nucleoside diphosphate kinase M478_RS02050 PF04055 Radical SAM superfamily M478_RS02055 PF13181 Tetratricopeptide repeat M478_RS02055 PF13431 Tetratricopeptide repeat M478_RS02060 PF13413 Helix-turn-helix domain M478_RS02060 PF13464 M478_RS02060 M478_RS02065 PF04551 GcpE protein M478_RS02070 PF03129 Anticodon binding domain M478_RS02070 PF13393 Histidyl-tRNA synthetase M478_RS02075 PF09976 Tetratricopeptide repeat M478_RS02080 PF13360 PQQ-like domain M478_RS02085 PF01926 50S ribosome-binding GTPase M478_RS02085 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal M478_RS02090 PF03547 M478_RS02090 M478_RS02095 PF07191 zinc-ribbons M478_RS02100 PF02601 M478_RS02100 M478_RS02100 PF13742 M478_RS02100 M478_RS02105 PF00478 IMP dehydrogenase / GMP reductase domain M478_RS02105 PF00571 CBS domain M478_RS02115 PF00117 Glutamine amidotransferase class-I M478_RS02115 PF00958 GMP synthase C terminal domain M478_RS02115 PF02540 NAD synthase M478_RS02125 PF01797 Transposase IS200 like M478_RS02130 PF05638 Protein of unknown function (DUF796) M478_RS02135 PF06836 M478_RS02135 M478_RS02140 PF06836 M478_RS02140 M478_RS02145 PF06836 M478_RS02145 M478_RS02150 PF06836 M478_RS02150 M478_RS02160 PF00872 M478_RS02160 M478_RS02170 PF06092 M478_RS02170 M478_RS02175 PF08543 Phosphomethylpyrimidine kinase M478_RS02185 PF08816 Inhibitor of vertebrate lysozyme (Ivy) M478_RS02190 PF00781 Diacylglycerol kinase catalytic domain M478_RS02195 PF01136 M478_RS02195 M478_RS02195 PF16325 M478_RS02195 M478_RS02200 PF07411 Domain of unknown function (DUF1508) M478_RS02205 PF00072 Response regulator receiver domain M478_RS02205 PF00486 Transcriptional regulatory protein, C terminal M478_RS02210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M478_RS02215 PF00512 His Kinase A (phospho-acceptor) domain M478_RS02215 PF00672 HAMP domain M478_RS02220 PF07690 Major Facilitator Superfamily M478_RS02225 PF00873 AcrB/AcrD/AcrF family M478_RS02230 PF00873 AcrB/AcrD/AcrF family M478_RS02235 PF13437 HlyD family secretion protein M478_RS02235 PF13533 Biotin-lipoyl like M478_RS02240 PF00005 ABC transporter M478_RS02240 PF08402 TOBE domain M478_RS02245 PF00155 Aminotransferase class I and II M478_RS02245 PF00392 Bacterial regulatory proteins, gntR family M478_RS02250 PF00202 Aminotransferase class-III M478_RS02255 PF13416 Bacterial extracellular solute-binding protein M478_RS02260 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS02265 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS02270 PF00012 Hsp70 protein M478_RS02275 PF00571 CBS domain M478_RS02275 PF01769 Divalent cation transporter M478_RS02275 PF03448 MgtE intracellular N domain M478_RS02280 PF11119 M478_RS02280 M478_RS02285 PF02541 Ppx/GppA phosphatase family M478_RS02290 PF02503 Polyphosphate kinase middle domain M478_RS02290 PF13089 Polyphosphate kinase N-terminal domain M478_RS02290 PF13090 Polyphosphate kinase C-terminal domain M478_RS02295 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS02300 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS02305 PF00005 ABC transporter M478_RS02310 PF03692 M478_RS02310 M478_RS02320 PF13302 Acetyltransferase (GNAT) domain M478_RS02325 PF00551 Formyl transferase M478_RS02330 PF00586 AIR synthase related protein, N-terminal domain M478_RS02330 PF02769 AIR synthase related protein, C-terminal domain M478_RS02335 PF14681 Uracil phosphoribosyltransferase M478_RS02340 PF01797 Transposase IS200 like M478_RS02345 PF00308 Bacterial dnaA protein M478_RS02350 PF03960 ArsC family M478_RS02355 PF01435 Peptidase family M48 M478_RS02355 PF07720 Tetratricopeptide repeat M478_RS02355 PF14559 Tetratricopeptide repeat M478_RS02360 PF01594 M478_RS02360 M478_RS02380 PF00578 AhpC/TSA family M478_RS02385 PF13740 ACT domain M478_RS02390 PF00701 Dihydrodipicolinate synthetase family M478_RS02395 PF06804 NlpB/DapX lipoprotein M478_RS02405 PF01797 Transposase IS200 like M478_RS02410 PF01259 SAICAR synthetase M478_RS02415 PF04228 M478_RS02415 M478_RS02420 PF04284 M478_RS02420 M478_RS02425 PF05127 Helicase M478_RS02425 PF08351 Domain of unknown function (DUF1726) M478_RS02425 PF13718 GNAT acetyltransferase 2 M478_RS02425 PF17176 M478_RS02425 M478_RS02430 PF13980 M478_RS02430 M478_RS02435 PF02557 D-alanyl-D-alanine carboxypeptidase M478_RS02440 PF01546 Peptidase family M20/M25/M40 M478_RS02440 PF07687 Peptidase dimerisation domain M478_RS02445 PF03960 ArsC family M478_RS02450 PF12688 Tetratrico peptide repeat M478_RS02455 PF13416 Bacterial extracellular solute-binding protein M478_RS02460 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS02465 PF00005 ABC transporter M478_RS02470 PF00884 Sulfatase M478_RS02475 PF04055 Radical SAM superfamily M478_RS02475 PF13353 4Fe-4S single cluster domain M478_RS02480 PF04307 M478_RS02480 M478_RS02490 PF00873 AcrB/AcrD/AcrF family M478_RS02495 PF09904 Winged helix-turn helix M478_RS02500 PF00072 Response regulator receiver domain M478_RS02500 PF00196 Bacterial regulatory proteins, luxR family M478_RS02505 PF12838 4Fe-4S dicluster domain M478_RS02505 PF13187 4Fe-4S dicluster domain M478_RS02510 PF03927 NapD protein M478_RS02520 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) M478_RS02525 PF03264 NapC/NirT cytochrome c family, N-terminal region M478_RS02530 PF00293 NUDIX domain M478_RS02535 PF00390 Malic enzyme, N-terminal domain M478_RS02535 PF01515 Phosphate acetyl/butaryl transferase M478_RS02535 PF03949 Malic enzyme, NAD binding domain M478_RS02540 PF02639 M478_RS02540 M478_RS02545 PF01218 Coproporphyrinogen III oxidase M478_RS02550 PF00583 Acetyltransferase (GNAT) family M478_RS02565 PF03212 Pertactin M478_RS02565 PF03797 Autotransporter beta-domain M478_RS02570 PF04076 Bacterial OB fold (BOF) protein M478_RS02575 PF06572 Protein of unknown function (DUF1131) M478_RS02580 PF04261 Dyp-type peroxidase family M478_RS02585 PF00701 Dihydrodipicolinate synthetase family M478_RS02590 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase M478_RS02595 PF12468 Type III secretion system leucine rich repeat protein M478_RS02595 PF13855 Leucine rich repeat M478_RS02600 PF00480 ROK family M478_RS02605 PF04074 Domain of unknown function (DUF386) M478_RS02615 PF01380 SIS domain M478_RS02615 PF01418 Helix-turn-helix domain, rpiR family M478_RS02620 PF07690 Major Facilitator Superfamily M478_RS02625 PF13531 Bacterial extracellular solute-binding protein M478_RS02630 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS02635 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS02640 PF00005 ABC transporter M478_RS02645 PF00291 Pyridoxal-phosphate dependent enzyme M478_RS02655 PF00072 Response regulator receiver domain M478_RS02655 PF00486 Transcriptional regulatory protein, C terminal M478_RS02660 PF00512 His Kinase A (phospho-acceptor) domain M478_RS02660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M478_RS02665 PF00092 von Willebrand factor type A domain M478_RS02670 PF00155 Aminotransferase class I and II M478_RS02675 PF01321 Creatinase/Prolidase N-terminal domain M478_RS02680 PF00557 Metallopeptidase family M24 M478_RS02680 PF01321 Creatinase/Prolidase N-terminal domain M478_RS02685 PF11755 M478_RS02685 M478_RS02695 PF00581 Rhodanese-like domain M478_RS02695 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M478_RS02695 PF07992 Pyridine nucleotide-disulphide oxidoreductase M478_RS02700 PF00005 ABC transporter M478_RS02700 PF02687 M478_RS02700 M478_RS02700 PF12704 MacB-like periplasmic core domain M478_RS02705 PF16576 M478_RS02705 M478_RS02710 PF00072 Response regulator receiver domain M478_RS02710 PF00486 Transcriptional regulatory protein, C terminal M478_RS02715 PF00512 His Kinase A (phospho-acceptor) domain M478_RS02715 PF00672 HAMP domain M478_RS02715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M478_RS02725 PF01797 Transposase IS200 like M478_RS02730 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M478_RS02735 PF00391 PEP-utilising enzyme, mobile domain M478_RS02735 PF02896 PEP-utilising enzyme, TIM barrel domain M478_RS02735 PF05524 PEP-utilising enzyme, N-terminal M478_RS02740 PF00381 PTS HPr component phosphorylation site M478_RS02745 PF00291 Pyridoxal-phosphate dependent enzyme M478_RS02750 PF07264 Etoposide-induced protein 2 M478_RS02755 PF04354 ZipA, C-terminal FtsZ-binding domain M478_RS02760 PF00533 BRCA1 C Terminus (BRCT) domain M478_RS02760 PF01653 NAD-dependent DNA ligase adenylation domain M478_RS02760 PF03119 NAD-dependent DNA ligase C4 zinc finger domain M478_RS02760 PF03120 NAD-dependent DNA ligase OB-fold domain M478_RS02760 PF12826 Helix-hairpin-helix motif M478_RS02760 PF14520 Helix-hairpin-helix domain M478_RS02765 PF12843 M478_RS02765 M478_RS02770 PF14282 M478_RS02770 M478_RS02775 PF06042 Bacterial protein of unknown function (DUF925) M478_RS02790 PF01797 Transposase IS200 like M478_RS02795 PF00749 tRNA synthetases class I (E and Q), catalytic domain M478_RS02815 PF01773 Na+ dependent nucleoside transporter N-terminus M478_RS02815 PF07662 Na+ dependent nucleoside transporter C-terminus M478_RS02815 PF07670 Nucleoside recognition M478_RS02820 PF01566 M478_RS02820 M478_RS02825 PF10697 M478_RS02825 M478_RS02830 PF00248 Aldo/keto reductase family M478_RS02835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M478_RS02835 PF03466 LysR substrate binding domain M478_RS02840 PF05232 M478_RS02840 M478_RS02845 PF02685 Glucokinase M478_RS02850 PF07350 Protein of unknown function (DUF1479) M478_RS02855 PF00155 Aminotransferase class I and II M478_RS02860 PF01292 Prokaryotic cytochrome b561 M478_RS02865 PF15970 M478_RS02865 M478_RS02870 PF03783 Curli production assembly/transport component CsgG M478_RS02875 PF16068 M478_RS02875 M478_RS02880 PF05643 Putative bacterial lipoprotein (DUF799) M478_RS02885 PF00037 4Fe-4S binding domain M478_RS02885 PF12838 4Fe-4S dicluster domain M478_RS02890 PF02613 Nitrate reductase delta subunit M478_RS02895 PF04976 M478_RS02895 M478_RS02900 PF13247 4Fe-4S dicluster domain M478_RS02905 PF00384 Molybdopterin oxidoreductase M478_RS02905 PF01568 Molydopterin dinucleotide binding domain M478_RS02905 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M478_RS02910 PF13988 M478_RS02910 M478_RS02915 PF05638 Protein of unknown function (DUF796) M478_RS02920 PF09900 M478_RS02920 M478_RS02925 PF00005 ABC transporter M478_RS02930 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS02935 PF13343 Bacterial extracellular solute-binding protein M478_RS02940 PF13406 Transglycosylase SLT domain M478_RS02945 PF00196 Bacterial regulatory proteins, luxR family M478_RS02950 PF08786 Domain of unknown function (DUF1795) M478_RS02955 PF00691 OmpA family M478_RS02965 PF11397 M478_RS02965 M478_RS02970 PF00419 Fimbrial protein M478_RS02975 PF06812 M478_RS02975 M478_RS02980 PF06996 M478_RS02980 M478_RS02985 PF05947 M478_RS02985 M478_RS02990 PF00004 ATPase family associated with various cellular activities (AAA) M478_RS02990 PF02861 Clp amino terminal domain M478_RS02990 PF07724 AAA domain (Cdc48 subfamily) M478_RS02990 PF10431 C-terminal, D2-small domain, of ClpB protein M478_RS02995 PF16970 M478_RS02995 M478_RS03000 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M478_RS03000 PF02753 Pili assembly chaperone PapD, C-terminal domain M478_RS03005 PF00577 Outer membrane usher protein M478_RS03005 PF13954 PapC N-terminal domain M478_RS03010 PF00872 M478_RS03010 M478_RS03015 PF00577 Outer membrane usher protein M478_RS03015 PF13953 PapC C-terminal domain M478_RS03020 PF00419 Fimbrial protein M478_RS03025 PF05591 M478_RS03025 M478_RS03030 PF05943 M478_RS03030 M478_RS03035 PF05638 Protein of unknown function (DUF796) M478_RS03040 PF12790 Type VI secretion lipoprotein M478_RS03045 PF05936 M478_RS03045 M478_RS03050 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) M478_RS03055 PF00665 Integrase core domain M478_RS03055 PF02796 Helix-turn-helix domain of resolvase M478_RS03065 PF01695 IstB-like ATP binding protein M478_RS03070 PF00691 OmpA family M478_RS03070 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) M478_RS03075 PF06744 M478_RS03075 M478_RS03075 PF06761 M478_RS03075 M478_RS03075 PF14331 M478_RS03075 M478_RS03080 PF05954 Phage late control gene D protein (GPD) M478_RS03085 PF05488 PAAR motif M478_RS03095 PF07024 ImpE protein M478_RS03100 PF04965 Gene 25-like lysozyme M478_RS03110 PF03831 PhnA protein M478_RS03110 PF08274 PhnA Zinc-Ribbon M478_RS03115 PF09972 M478_RS03115 M478_RS03120 PF04011 LemA family M478_RS03135 PF00005 ABC transporter M478_RS03140 PF03379 M478_RS03140 M478_RS03145 PF01578 M478_RS03145 M478_RS03150 PF04995 M478_RS03150 M478_RS03155 PF03100 CcmE M478_RS03160 PF01578 M478_RS03160 M478_RS03160 PF16327 M478_RS03160 M478_RS03165 PF08534 Redoxin M478_RS03170 PF03918 Cytochrome C biogenesis protein M478_RS03175 PF14559 Tetratricopeptide repeat M478_RS03180 PF04333 M478_RS03180 M478_RS03185 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) M478_RS03190 PF04175 Protein of unknown function (DUF406) M478_RS03195 PF00108 Thiolase, N-terminal domain M478_RS03195 PF02803 Thiolase, C-terminal domain M478_RS03200 PF00378 Enoyl-CoA hydratase/isomerase family M478_RS03200 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M478_RS03200 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M478_RS03205 PF00300 Histidine phosphatase superfamily (branch 1) M478_RS03210 PF01713 Smr domain M478_RS03215 PF05175 Methyltransferase small domain M478_RS03220 PF01264 Chorismate synthase M478_RS03225 PF03411 Penicillin-insensitive murein endopeptidase M478_RS03230 PF01925 M478_RS03230 M478_RS03235 PF04315 M478_RS03235 M478_RS03240 PF08891 M478_RS03240 M478_RS03245 PF01266 FAD dependent oxidoreductase M478_RS03245 PF05430 S-adenosyl-L-methionine-dependent methyltransferase M478_RS03250 PF00109 Beta-ketoacyl synthase, N-terminal domain M478_RS03250 PF02801 Beta-ketoacyl synthase, C-terminal domain M478_RS03255 PF01177 Asp/Glu/Hydantoin racemase M478_RS03260 PF00419 Fimbrial protein M478_RS03270 PF00892 EamA-like transporter family M478_RS03280 PF02311 AraC-like ligand binding domain M478_RS03280 PF12833 Helix-turn-helix domain M478_RS03285 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M478_RS03285 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M478_RS03285 PF11890 Domain of unknown function (DUF3410) M478_RS03290 PF01118 Semialdehyde dehydrogenase, NAD binding domain M478_RS03290 PF02774 Semialdehyde dehydrogenase, dimerisation domain M478_RS03295 PF01416 tRNA pseudouridine synthase M478_RS03300 PF09335 M478_RS03300 M478_RS03305 PF01039 Carboxyl transferase domain M478_RS03310 PF02875 Mur ligase family, glutamate ligase domain M478_RS03310 PF08245 Mur ligase middle domain M478_RS03315 PF05036 Sporulation related domain M478_RS03320 PF02674 M478_RS03320 M478_RS03325 PF00156 Phosphoribosyl transferase domain M478_RS03325 PF13522 Glutamine amidotransferase domain M478_RS03330 PF02441 Flavoprotein M478_RS03335 PF00497 Bacterial extracellular solute-binding proteins, family 3 M478_RS03340 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS03345 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS03350 PF00005 ABC transporter M478_RS03355 PF01370 NAD dependent epimerase/dehydratase family M478_RS03355 PF08338 Domain of unknown function (DUF1731) M478_RS03360 PF00563 EAL domain M478_RS03365 PF12850 Calcineurin-like phosphoesterase superfamily domain M478_RS03370 PF00293 NUDIX domain M478_RS03375 PF03611 M478_RS03375 M478_RS03380 PF00872 M478_RS03380 M478_RS03385 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M478_RS03390 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M478_RS03395 PF00356 Bacterial regulatory proteins, lacI family M478_RS03395 PF13377 Periplasmic binding protein-like domain M478_RS03400 PF01515 Phosphate acetyl/butaryl transferase M478_RS03400 PF07085 DRTGG domain M478_RS03400 PF13500 AAA domain M478_RS03405 PF00871 Acetokinase family M478_RS03415 PF04217 M478_RS03415 M478_RS03420 PF03887 YfbU domain M478_RS03425 PF13419 Haloacid dehalogenase-like hydrolase M478_RS03430 PF02080 TrkA-C domain M478_RS03430 PF03600 Citrate transporter M478_RS03440 PF13023 HD domain M478_RS03445 PF00155 Aminotransferase class I and II M478_RS03455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M478_RS03455 PF03466 LysR substrate binding domain M478_RS03460 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 M478_RS03465 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit M478_RS03470 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit M478_RS03470 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit M478_RS03475 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin M478_RS03480 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit M478_RS03480 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region M478_RS03485 PF00384 Molybdopterin oxidoreductase M478_RS03485 PF01568 Molydopterin dinucleotide binding domain M478_RS03485 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M478_RS03485 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region M478_RS03485 PF13510 2Fe-2S iron-sulfur cluster binding domain M478_RS03490 PF00146 NADH dehydrogenase M478_RS03495 PF12838 4Fe-4S dicluster domain M478_RS03500 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 M478_RS03505 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M478_RS03510 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains M478_RS03510 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M478_RS03515 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains M478_RS03520 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains M478_RS03530 PF04074 Domain of unknown function (DUF386) M478_RS03535 PF13561 Enoyl-(Acyl carrier protein) reductase M478_RS03540 PF01202 Shikimate kinase M478_RS03545 PF04074 Domain of unknown function (DUF386) M478_RS03550 PF02638 M478_RS03550 M478_RS03555 PF00356 Bacterial regulatory proteins, lacI family M478_RS03555 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family M478_RS03565 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M478_RS03565 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M478_RS03570 PF07690 Major Facilitator Superfamily M478_RS03575 PF03928 Domain of unknown function (DUF336) M478_RS03580 PF00920 Dehydratase family M478_RS03595 PF05957 M478_RS03595 M478_RS03605 PF00425 chorismate binding enzyme M478_RS03610 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M478_RS03610 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M478_RS03610 PF16582 M478_RS03610 M478_RS03615 PF12697 Alpha/beta hydrolase family M478_RS03620 PF00378 Enoyl-CoA hydratase/isomerase family M478_RS03625 PF13378 Enolase C-terminal domain-like M478_RS03630 PF00501 AMP-binding enzyme M478_RS03635 PF00591 Glycosyl transferase family, a/b domain M478_RS03635 PF02885 Glycosyl transferase family, helical bundle domain M478_RS03640 PF07338 Protein of unknown function (DUF1471) M478_RS03645 PF05971 Protein of unknown function (DUF890) M478_RS03650 PF01695 IstB-like ATP binding protein M478_RS03655 PF00665 Integrase core domain M478_RS03655 PF02796 Helix-turn-helix domain of resolvase M478_RS03660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M478_RS03660 PF08448 PAS fold M478_RS03660 PF13426 PAS domain M478_RS03665 PF00005 ABC transporter M478_RS03670 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS03675 PF00497 Bacterial extracellular solute-binding proteins, family 3 M478_RS03680 PF02698 DUF218 domain M478_RS03685 PF00210 Ferritin-like domain M478_RS03690 PF13649 Methyltransferase domain M478_RS03695 PF13673 Acetyltransferase (GNAT) domain M478_RS03700 PF00892 EamA-like transporter family M478_RS03705 PF13505 Outer membrane protein beta-barrel domain M478_RS03710 PF01545 Cation efflux family M478_RS03715 PF16809 M478_RS03715 M478_RS03720 PF16809 M478_RS03720 M478_RS03725 PF00107 Zinc-binding dehydrogenase M478_RS03725 PF08240 Alcohol dehydrogenase GroES-like domain M478_RS03730 PF13407 Periplasmic binding protein domain M478_RS03735 PF00005 ABC transporter M478_RS03740 PF02653 M478_RS03740 M478_RS03745 PF00356 Bacterial regulatory proteins, lacI family M478_RS03745 PF13407 Periplasmic binding protein domain M478_RS03750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M478_RS03750 PF03466 LysR substrate binding domain M478_RS03755 PF00180 Isocitrate/isopropylmalate dehydrogenase M478_RS03765 PF02028 BCCT family transporter M478_RS03775 PF00111 2Fe-2S iron-sulfur cluster binding domain M478_RS03775 PF00175 Oxidoreductase NAD-binding domain M478_RS03775 PF00970 Oxidoreductase FAD-binding domain M478_RS03780 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB M478_RS03780 PF08479 POTRA domain, ShlB-type M478_RS03785 PF04829 M478_RS03785 M478_RS03785 PF05594 M478_RS03785 M478_RS03785 PF05860 haemagglutination activity domain M478_RS03785 PF13018 M478_RS03785 M478_RS03785 PF13332 M478_RS03785 M478_RS03790 PF10004 M478_RS03790 M478_RS03805 PF04829 M478_RS03805 M478_RS03820 PF14106 M478_RS03820 M478_RS03835 PF00005 ABC transporter M478_RS03835 PF08402 TOBE domain M478_RS03840 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M478_RS03840 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M478_RS03840 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M478_RS03840 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M478_RS03845 PF00356 Bacterial regulatory proteins, lacI family M478_RS03845 PF13377 Periplasmic binding protein-like domain M478_RS03850 PF13416 Bacterial extracellular solute-binding protein M478_RS03855 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS03860 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS03865 PF04041 Domain of unknown function (DUF377) M478_RS03870 PF08950 Protein of unknown function (DUF1861) M478_RS03885 PF00924 Mechanosensitive ion channel M478_RS03890 PF01867 CRISPR associated protein Cas1 M478_RS03900 PF09611 M478_RS03900 M478_RS03905 PF09614 M478_RS03905 M478_RS03910 PF09615 M478_RS03910 M478_RS03915 PF09618 CRISPR-associated protein (Cas_Csy4) M478_RS03920 PF00248 Aldo/keto reductase family M478_RS03925 PF08714 Formaldehyde-activating enzyme (Fae) M478_RS03930 PF00083 Sugar (and other) transporter M478_RS03940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M478_RS03940 PF03466 LysR substrate binding domain M478_RS03945 PF00196 Bacterial regulatory proteins, luxR family M478_RS03945 PF03472 Autoinducer binding domain M478_RS03950 PF00765 Autoinducer synthetase M478_RS03955 PF00892 EamA-like transporter family M478_RS03975 PF00581 Rhodanese-like domain M478_RS03975 PF12368 M478_RS03975 M478_RS03980 PF01594 M478_RS03980 M478_RS03985 PF00196 Bacterial regulatory proteins, luxR family M478_RS03990 PF01266 FAD dependent oxidoreductase M478_RS04005 PF03992 Antibiotic biosynthesis monooxygenase M478_RS04010 PF01979 Amidohydrolase family M478_RS04015 PF06183 DinI-like family M478_RS04025 PF13991 M478_RS04025 M478_RS04030 PF00872 M478_RS04030 M478_RS04035 PF00575 S1 RNA binding domain M478_RS04035 PF10150 Ribonuclease E/G family M478_RS04035 PF12111 Polyribonucleotide phosphorylase C terminal M478_RS04040 PF00849 RNA pseudouridylate synthase M478_RS04040 PF01479 S4 domain M478_RS04045 PF02545 Maf-like protein M478_RS04050 PF02620 M478_RS04050 M478_RS04055 PF01783 Ribosomal L32p protein family M478_RS04060 PF02504 Fatty acid synthesis protein M478_RS04065 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M478_RS04065 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M478_RS04070 PF00698 Acyl transferase domain M478_RS04075 PF13561 Enoyl-(Acyl carrier protein) reductase M478_RS04080 PF00550 Phosphopantetheine attachment site M478_RS04085 PF00109 Beta-ketoacyl synthase, N-terminal domain M478_RS04085 PF02801 Beta-ketoacyl synthase, C-terminal domain M478_RS04090 PF01797 Transposase IS200 like M478_RS04095 PF01063 Aminotransferase class IV M478_RS04100 PF02618 YceG-like family M478_RS04105 PF02223 Thymidylate kinase M478_RS04110 PF09115 DNA polymerase III, delta subunit, C terminal M478_RS04110 PF13177 DNA polymerase III, delta subunit M478_RS04115 PF01026 TatD related DNase M478_RS04120 PF00367 phosphotransferase system, EIIB M478_RS04120 PF02378 Phosphotransferase system, EIIC M478_RS04125 PF01797 Transposase IS200 like M478_RS04145 PF02796 Helix-turn-helix domain of resolvase M478_RS04150 PF08501 Shikimate dehydrogenase substrate binding domain M478_RS04155 PF01230 HIT domain M478_RS04160 PF07233 Protein of unknown function (DUF1425) M478_RS04165 PF13036 Protein of unknown function (DUF3897) M478_RS04170 PF01636 Phosphotransferase enzyme family M478_RS04175 PF00933 Glycosyl hydrolase family 3 N terminal domain M478_RS04180 PF05728 Uncharacterised protein family (UPF0227) M478_RS04185 PF07992 Pyridine nucleotide-disulphide oxidoreductase M478_RS04200 PF00872 M478_RS04200 M478_RS04205 PF05433 M478_RS04205 M478_RS04210 PF00270 DEAD/DEAH box helicase M478_RS04210 PF00271 Helicase conserved C-terminal domain M478_RS04210 PF02559 CarD-like/TRCF domain M478_RS04210 PF03461 TRCF domain M478_RS04215 PF02687 M478_RS04215 M478_RS04215 PF12704 MacB-like periplasmic core domain M478_RS04220 PF00005 ABC transporter M478_RS04225 PF02687 M478_RS04225 M478_RS04225 PF12704 MacB-like periplasmic core domain M478_RS04230 PF00480 ROK family M478_RS04235 PF02146 Sir2 family M478_RS04240 PF01546 Peptidase family M20/M25/M40 M478_RS04240 PF07687 Peptidase dimerisation domain M478_RS04245 PF08007 Cupin superfamily protein M478_RS04250 PF00672 HAMP domain M478_RS04250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M478_RS04250 PF08918 PhoQ Sensor M478_RS04255 PF00072 Response regulator receiver domain M478_RS04255 PF00486 Transcriptional regulatory protein, C terminal M478_RS04260 PF13505 Outer membrane protein beta-barrel domain M478_RS04265 PF00206 Lyase M478_RS04265 PF08328 Adenylosuccinate lyase C-terminal M478_RS04270 PF04356 Protein of unknown function (DUF489) M478_RS04275 PF03054 tRNA methyl transferase M478_RS04280 PF00293 NUDIX domain M478_RS04285 PF00849 RNA pseudouridylate synthase M478_RS04290 PF00180 Isocitrate/isopropylmalate dehydrogenase M478_RS04295 PF00356 Bacterial regulatory proteins, lacI family M478_RS04295 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family M478_RS04305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M478_RS04305 PF00672 HAMP domain M478_RS04305 PF08447 PAS fold M478_RS04310 PF05368 NmrA-like family M478_RS04315 PF01638 HxlR-like helix-turn-helix M478_RS04325 PF00328 Histidine phosphatase superfamily (branch 2) M478_RS04330 PF14001 M478_RS04330 M478_RS04335 PF11004 M478_RS04335 M478_RS04340 PF01037 AsnC family M478_RS04340 PF13412 Winged helix-turn-helix DNA-binding M478_RS04345 PF10777 M478_RS04345 M478_RS04350 PF00107 Zinc-binding dehydrogenase M478_RS04350 PF08240 Alcohol dehydrogenase GroES-like domain M478_RS04355 PF00703 Glycosyl hydrolases family 2 M478_RS04355 PF02836 Glycosyl hydrolases family 2, TIM barrel domain M478_RS04355 PF02837 Glycosyl hydrolases family 2, sugar binding domain M478_RS04355 PF02929 Beta galactosidase small chain M478_RS04355 PF16353 M478_RS04355 M478_RS04360 PF00313 'Cold-shock' DNA-binding domain M478_RS04365 PF10781 M478_RS04365 M478_RS04380 PF02308 M478_RS04380 M478_RS04385 PF00122 E1-E2 ATPase M478_RS04385 PF00689 Cation transporting ATPase, C-terminus M478_RS04385 PF00690 Cation transporter/ATPase, N-terminus M478_RS04385 PF00702 haloacid dehalogenase-like hydrolase M478_RS04395 PF05280 Flagellar transcriptional activator (FlhC) M478_RS04400 PF01618 M478_RS04400 M478_RS04405 PF00691 OmpA family M478_RS04405 PF13677 M478_RS04405 M478_RS04410 PF01584 CheW-like domain M478_RS04410 PF01627 Hpt domain M478_RS04410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M478_RS04410 PF02895 Signal transducing histidine kinase, homodimeric domain M478_RS04410 PF09078 CheY binding M478_RS04415 PF01584 CheW-like domain M478_RS04420 PF07690 Major Facilitator Superfamily M478_RS04425 PF01042 Endoribonuclease L-PSP M478_RS04430 PF01261 Xylose isomerase-like TIM barrel M478_RS04435 PF08348 M478_RS04435 M478_RS04435 PF13309 M478_RS04435 M478_RS04445 PF10101 M478_RS04445 M478_RS04455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M478_RS04455 PF00672 HAMP domain M478_RS04455 PF02203 Tar ligand binding domain homologue M478_RS04460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M478_RS04460 PF00672 HAMP domain M478_RS04460 PF02203 Tar ligand binding domain homologue M478_RS04465 PF01739 CheR methyltransferase, SAM binding domain M478_RS04465 PF03705 CheR methyltransferase, all-alpha domain M478_RS04470 PF00072 Response regulator receiver domain M478_RS04470 PF01339 CheB methylesterase M478_RS04475 PF00072 Response regulator receiver domain M478_RS04480 PF04344 Chemotaxis phosphatase, CheZ M478_RS04490 PF01510 N-acetylmuramoyl-L-alanine amidase M478_RS04495 PF05658 Head domain of trimeric autotransporter adhesin M478_RS04495 PF05662 Coiled stalk of trimeric autotransporter adhesin M478_RS04500 PF03895 YadA-like C-terminal region M478_RS04500 PF05662 Coiled stalk of trimeric autotransporter adhesin M478_RS04510 PF00842 Alanine racemase, C-terminal domain M478_RS04510 PF01168 Alanine racemase, N-terminal domain M478_RS04525 PF01734 Patatin-like phospholipase M478_RS04535 PF01695 IstB-like ATP binding protein M478_RS04540 PF00665 Integrase core domain M478_RS04540 PF02796 Helix-turn-helix domain of resolvase M478_RS04545 PF04266 ASCH domain M478_RS04550 PF07351 M478_RS04550 M478_RS04555 PF05229 M478_RS04555 M478_RS04560 PF00577 Outer membrane usher protein M478_RS04560 PF13953 PapC C-terminal domain M478_RS04565 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M478_RS04570 PF05229 M478_RS04570 M478_RS04575 PF05229 M478_RS04575 M478_RS04580 PF05229 M478_RS04580 M478_RS04585 PF02470 M478_RS04585 M478_RS04590 PF04403 M478_RS04590 M478_RS04595 PF13185 GAF domain M478_RS04600 PF04352 ProQ/FINO family M478_RS04605 PF00595 PDZ domain (Also known as DHR or GLGF) M478_RS04605 PF03572 Peptidase family S41 M478_RS04605 PF11818 M478_RS04605 M478_RS04610 PF01435 Peptidase family M48 M478_RS04615 PF16970 M478_RS04615 M478_RS04620 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M478_RS04620 PF02753 Pili assembly chaperone PapD, C-terminal domain M478_RS04625 PF00577 Outer membrane usher protein M478_RS04625 PF13953 PapC C-terminal domain M478_RS04625 PF13954 PapC N-terminal domain M478_RS04630 PF00419 Fimbrial protein M478_RS04635 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M478_RS04635 PF02753 Pili assembly chaperone PapD, C-terminal domain M478_RS04640 PF07690 Major Facilitator Superfamily M478_RS04645 PF14583 Oligogalacturonate lyase M478_RS04650 PF01614 Bacterial transcriptional regulator M478_RS04650 PF09339 IclR helix-turn-helix domain M478_RS04655 PF01471 Putative peptidoglycan binding domain M478_RS04655 PF01510 N-acetylmuramoyl-L-alanine amidase M478_RS04660 PF00375 Sodium:dicarboxylate symporter family M478_RS04665 PF04307 M478_RS04665 M478_RS04670 PF06178 Oligogalacturonate-specific porin protein (KdgM) M478_RS04675 PF01547 Bacterial extracellular solute-binding protein M478_RS04680 PF00005 ABC transporter M478_RS04685 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS04690 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS04695 PF06917 Periplasmic pectate lyase M478_RS04700 PF13561 Enoyl-(Acyl carrier protein) reductase M478_RS04705 PF04962 KduI/IolB family M478_RS04710 PF07883 Cupin domain M478_RS04715 PF00872 M478_RS04715 M478_RS04720 PF13419 Haloacid dehalogenase-like hydrolase M478_RS04725 PF14002 M478_RS04725 M478_RS04730 PF03881 Fructosamine kinase M478_RS04740 PF00950 M478_RS04740 M478_RS04745 PF00950 M478_RS04745 M478_RS04750 PF00005 ABC transporter M478_RS04755 PF01297 Periplasmic solute binding protein family M478_RS04760 PF01464 Transglycosylase SLT domain M478_RS04765 PF01914 M478_RS04765 M478_RS04780 PF13619 M478_RS04780 M478_RS04785 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M478_RS04785 PF02824 TGS domain M478_RS04785 PF03129 Anticodon binding domain M478_RS04785 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M478_RS04790 PF00707 Translation initiation factor IF-3, C-terminal domain M478_RS04795 PF01632 Ribosomal protein L35 M478_RS04800 PF00453 Ribosomal protein L20 M478_RS04805 PF01409 tRNA synthetases class II core domain (F) M478_RS04805 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain M478_RS04810 PF01588 Putative tRNA binding domain M478_RS04810 PF03147 Ferredoxin-fold anticodon binding domain M478_RS04810 PF03483 B3/4 domain M478_RS04810 PF03484 tRNA synthetase B5 domain M478_RS04815 PF00216 Bacterial DNA-binding protein M478_RS04820 PF10697 M478_RS04820 M478_RS04825 PF01032 FecCD transport family M478_RS04830 PF00255 Glutathione peroxidase M478_RS04835 PF00005 ABC transporter M478_RS04840 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family M478_RS04845 PF00535 Glycosyl transferase family 2 M478_RS04850 PF00551 Formyl transferase M478_RS04850 PF01370 NAD dependent epimerase/dehydratase family M478_RS04850 PF02911 Formyl transferase, C-terminal domain M478_RS04855 PF01522 Polysaccharide deacetylase M478_RS04860 PF02366 M478_RS04860 M478_RS04865 PF00892 EamA-like transporter family M478_RS04875 PF00877 NlpC/P60 family M478_RS04880 PF03099 Biotin/lipoate A/B protein ligase family M478_RS04880 PF10437 Bacterial lipoate protein ligase C-terminus M478_RS04890 PF00793 DAHP synthetase I family M478_RS04895 PF03618 M478_RS04895 M478_RS04900 PF00391 PEP-utilising enzyme, mobile domain M478_RS04900 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain M478_RS04900 PF02896 PEP-utilising enzyme, TIM barrel domain M478_RS04905 PF01594 M478_RS04905 M478_RS04910 PF01565 FAD binding domain M478_RS04910 PF02913 FAD linked oxidases, C-terminal domain M478_RS04910 PF13183 4Fe-4S dicluster domain M478_RS04915 PF03061 Thioesterase superfamily M478_RS04925 PF01521 Iron-sulphur cluster biosynthesis M478_RS04930 PF01458 Uncharacterized protein family (UPF0051) M478_RS04935 PF00005 ABC transporter M478_RS04940 PF01458 Uncharacterized protein family (UPF0051) M478_RS04945 PF00266 Aminotransferase class-V M478_RS04950 PF02657 Fe-S metabolism associated domain M478_RS04955 PF03734 L,D-transpeptidase catalytic domain M478_RS04960 PF01695 IstB-like ATP binding protein M478_RS04970 PF00665 Integrase core domain M478_RS04975 PF02796 Helix-turn-helix domain of resolvase M478_RS04980 PF01797 Transposase IS200 like M478_RS04990 PF04728 Lipoprotein leucine-zipper M478_RS04995 PF00224 Pyruvate kinase, barrel domain M478_RS04995 PF02887 Pyruvate kinase, alpha/beta domain M478_RS05010 PF01554 MatE M478_RS05015 PF00677 Lumazine binding domain M478_RS05020 PF02353 Mycolic acid cyclopropane synthetase M478_RS05025 PF07690 Major Facilitator Superfamily M478_RS05030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M478_RS05030 PF03466 LysR substrate binding domain M478_RS05035 PF00356 Bacterial regulatory proteins, lacI family M478_RS05035 PF13377 Periplasmic binding protein-like domain M478_RS05040 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M478_RS05040 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M478_RS05045 PF00877 NlpC/P60 family M478_RS05055 PF00462 Glutaredoxin M478_RS05060 PF00929 Exonuclease M478_RS05065 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M478_RS05070 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M478_RS05075 PF00440 Bacterial regulatory proteins, tetR family M478_RS05075 PF16925 M478_RS05075 M478_RS05080 PF00884 Sulfatase M478_RS05080 PF08019 M478_RS05080 M478_RS05085 PF01047 MarR family M478_RS05090 PF05433 M478_RS05090 M478_RS05095 PF03702 Uncharacterised protein family (UPF0075) M478_RS05100 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme M478_RS05105 PF01243 Pyridoxamine 5'-phosphate oxidase M478_RS05105 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region M478_RS05110 PF00579 tRNA synthetases class I (W and Y) M478_RS05110 PF01479 S4 domain M478_RS05115 PF08543 Phosphomethylpyrimidine kinase M478_RS05120 PF00043 Glutathione S-transferase, C-terminal domain M478_RS05120 PF02798 Glutathione S-transferase, N-terminal domain M478_RS05125 PF11656 M478_RS05125 M478_RS05130 PF06930 M478_RS05130 M478_RS05135 PF00854 POT family M478_RS05145 PF00005 ABC transporter M478_RS05150 PF00005 ABC transporter M478_RS05150 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M478_RS05155 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS05155 PF12911 M478_RS05155 M478_RS05160 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS05165 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M478_RS05180 PF01797 Transposase IS200 like M478_RS05185 PF00158 Sigma-54 interaction domain M478_RS05185 PF02954 Bacterial regulatory protein, Fis family M478_RS05190 PF04012 M478_RS05190 M478_RS05195 PF06667 M478_RS05195 M478_RS05200 PF04024 M478_RS05200 M478_RS05205 PF09584 M478_RS05205 M478_RS05210 PF04317 M478_RS05210 M478_RS05215 PF05128 M478_RS05215 M478_RS05220 PF08808 M478_RS05220 M478_RS05225 PF09722 M478_RS05225 M478_RS05230 PF00158 Sigma-54 interaction domain M478_RS05230 PF00989 PAS fold M478_RS05235 PF01797 Transposase IS200 like M478_RS05240 PF08534 Redoxin M478_RS05245 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M478_RS05245 PF13378 Enolase C-terminal domain-like M478_RS05250 PF00246 Zinc carboxypeptidase M478_RS05255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M478_RS05260 PF01544 CorA-like Mg2+ transporter protein M478_RS05270 PF13411 MerR HTH family regulatory protein M478_RS05275 PF07859 alpha/beta hydrolase fold M478_RS05280 PF01171 PP-loop family M478_RS05285 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase M478_RS05285 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg M478_RS05285 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M478_RS05285 PF10371 Domain of unknown function M478_RS05285 PF12838 4Fe-4S dicluster domain M478_RS05285 PF17147 M478_RS05285 M478_RS05290 PF00893 Small Multidrug Resistance protein M478_RS05295 PF02308 M478_RS05295 M478_RS05300 PF03891 M478_RS05300 M478_RS05305 PF03724 META domain M478_RS05310 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M478_RS05310 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M478_RS05315 PF11739 M478_RS05315 M478_RS05320 PF13617 M478_RS05320 M478_RS05325 PF07027 M478_RS05325 M478_RS05330 PF01232 Mannitol dehydrogenase Rossmann domain M478_RS05330 PF08125 Mannitol dehydrogenase C-terminal domain M478_RS05335 PF04198 Putative sugar-binding domain M478_RS05335 PF13384 Homeodomain-like domain M478_RS05340 PF02525 Flavodoxin-like fold M478_RS05345 PF00270 DEAD/DEAH box helicase M478_RS05345 PF00271 Helicase conserved C-terminal domain M478_RS05345 PF04408 Helicase associated domain (HA2) M478_RS05345 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold M478_RS05345 PF11898 M478_RS05345 M478_RS05350 PF05973 M478_RS05350 M478_RS05355 PF01381 Helix-turn-helix M478_RS05360 PF00089 Trypsin M478_RS05390 PF03497 Anthrax toxin LF subunit M478_RS05400 PF01695 IstB-like ATP binding protein M478_RS05415 PF00171 Aldehyde dehydrogenase family M478_RS05415 PF00465 Iron-containing alcohol dehydrogenase M478_RS05420 PF01914 M478_RS05420 M478_RS05425 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M478_RS05430 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS05435 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS05435 PF12911 M478_RS05435 M478_RS05440 PF00005 ABC transporter M478_RS05440 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M478_RS05445 PF00005 ABC transporter M478_RS05445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M478_RS05460 PF04269 Protein of unknown function, DUF440 M478_RS05465 PF13091 PLD-like domain M478_RS05465 PF13396 M478_RS05465 M478_RS05470 PF13505 Outer membrane protein beta-barrel domain M478_RS05480 PF13453 M478_RS05480 M478_RS05485 PF03795 YCII-related domain M478_RS05490 PF03544 Gram-negative bacterial TonB protein C-terminal M478_RS05490 PF16031 M478_RS05490 M478_RS05495 PF00872 M478_RS05495 M478_RS05500 PF03061 Thioesterase superfamily M478_RS05505 PF04279 M478_RS05505 M478_RS05510 PF00916 M478_RS05510 M478_RS05515 PF01740 STAS domain M478_RS05520 PF06790 M478_RS05520 M478_RS05530 PF03922 OmpW family M478_RS05535 PF04972 BON domain M478_RS05540 PF00290 Tryptophan synthase alpha chain M478_RS05545 PF00291 Pyridoxal-phosphate dependent enzyme M478_RS05550 PF00218 Indole-3-glycerol phosphate synthase M478_RS05550 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase M478_RS05555 PF00591 Glycosyl transferase family, a/b domain M478_RS05555 PF02885 Glycosyl transferase family, helical bundle domain M478_RS05560 PF00117 Glutamine amidotransferase class-I M478_RS05565 PF00425 chorismate binding enzyme M478_RS05565 PF04715 Anthranilate synthase component I, N terminal region M478_RS05570 PF08255 M478_RS05570 M478_RS05580 PF02811 PHP domain M478_RS05585 PF01300 Telomere recombination M478_RS05590 PF00849 RNA pseudouridylate synthase M478_RS05590 PF01479 S4 domain M478_RS05595 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP M478_RS05595 PF12557 Cob(I)alamin adenosyltransferase N terminal M478_RS05600 PF00106 short chain dehydrogenase M478_RS05605 PF01343 Peptidase family S49 M478_RS05605 PF08496 M478_RS05605 M478_RS05610 PF10692 Protein of unknown function (DUF2498) M478_RS05620 PF01131 DNA topoisomerase M478_RS05620 PF01396 M478_RS05620 M478_RS05620 PF01751 Toprim domain M478_RS05620 PF08272 Topoisomerase I zinc-ribbon-like M478_RS05625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M478_RS05625 PF03466 LysR substrate binding domain M478_RS05635 PF00330 Aconitase family (aconitate hydratase) M478_RS05635 PF00694 Aconitase C-terminal domain M478_RS05640 PF00925 GTP cyclohydrolase II M478_RS05645 PF01569 PAP2 superfamily M478_RS05650 PF06305 M478_RS05650 M478_RS05655 PF13176 Tetratricopeptide repeat M478_RS05655 PF14559 Tetratricopeptide repeat M478_RS05665 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family M478_RS05670 PF01253 Translation initiation factor SUI1 M478_RS05675 PF05433 M478_RS05675 M478_RS05680 PF00596 Class II Aldolase and Adducin N-terminal domain M478_RS05685 PF09932 M478_RS05685 M478_RS05690 PF00923 Transaldolase M478_RS05695 PF04328 M478_RS05695 M478_RS05700 PF02554 M478_RS05700 M478_RS05700 PF13722 M478_RS05700 M478_RS05705 PF00575 S1 RNA binding domain M478_RS05705 PF00773 RNB domain M478_RS05705 PF08206 Ribonuclease B OB domain M478_RS05710 PF07690 Major Facilitator Superfamily M478_RS05715 PF01370 NAD dependent epimerase/dehydratase family M478_RS05720 PF00633 Helix-hairpin-helix motif M478_RS05720 PF00730 HhH-GPD superfamily base excision DNA repair protein M478_RS05720 PF10576 Iron-sulfur binding domain of endonuclease III M478_RS05725 PF02508 M478_RS05725 M478_RS05730 PF04205 FMN-binding domain M478_RS05735 PF03116 M478_RS05735 M478_RS05740 PF06445 GyrI-like small molecule binding domain M478_RS05740 PF12833 Helix-turn-helix domain M478_RS05745 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit M478_RS05745 PF10531 SLBB domain M478_RS05745 PF13237 4Fe-4S dicluster domain M478_RS05745 PF13375 RnfC Barrel sandwich hybrid domain M478_RS05750 PF04060 Putative Fe-S cluster M478_RS05750 PF14697 4Fe-4S dicluster domain M478_RS05755 PF02508 M478_RS05755 M478_RS05760 PF10754 M478_RS05760 M478_RS05765 PF00005 ABC transporter M478_RS05765 PF00664 ABC transporter transmembrane region M478_RS05775 PF13533 Biotin-lipoyl like M478_RS05780 PF00529 HlyD family secretion protein M478_RS05785 PF00005 ABC transporter M478_RS05785 PF00664 ABC transporter transmembrane region M478_RS05785 PF03412 Peptidase C39 family M478_RS05790 PF02610 L-arabinose isomerase M478_RS05790 PF11762 L-arabinose isomerase C-terminal domain M478_RS05795 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M478_RS05795 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M478_RS05800 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family M478_RS05805 PF00005 ABC transporter M478_RS05810 PF02653 M478_RS05810 M478_RS05815 PF02311 AraC-like ligand binding domain M478_RS05815 PF12833 Helix-turn-helix domain M478_RS05820 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M478_RS05820 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M478_RS05825 PF13593 SBF-like CPA transporter family (DUF4137) M478_RS05835 PF06097 M478_RS05835 M478_RS05840 PF01238 Phosphomannose isomerase type I M478_RS05845 PF00206 Lyase M478_RS05845 PF10415 Fumarase C C-terminus M478_RS05850 PF05472 DNA replication terminus site-binding protein (Ter protein) M478_RS05860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M478_RS05860 PF03466 LysR substrate binding domain M478_RS05865 PF00480 ROK family M478_RS05870 PF13500 AAA domain M478_RS05875 PF00654 Voltage gated chloride channel M478_RS05885 PF00356 Bacterial regulatory proteins, lacI family M478_RS05885 PF13377 Periplasmic binding protein-like domain M478_RS05895 PF13407 Periplasmic binding protein domain M478_RS05900 PF13379 NMT1-like family M478_RS05905 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS05910 PF00005 ABC transporter M478_RS05915 PF01048 Phosphorylase superfamily M478_RS05915 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus M478_RS05925 PF07520 M478_RS05925 M478_RS05930 PF10139 M478_RS05930 M478_RS05935 PF07313 Protein of unknown function (DUF1460) M478_RS05940 PF00205 Thiamine pyrophosphate enzyme, central domain M478_RS05940 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M478_RS05940 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M478_RS05945 PF13710 ACT domain M478_RS05950 PF13419 Haloacid dehalogenase-like hydrolase M478_RS05955 PF15615 M478_RS05955 M478_RS05960 PF13208 M478_RS05960 M478_RS05965 PF00245 Alkaline phosphatase M478_RS05970 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M478_RS05970 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M478_RS05975 PF00027 Cyclic nucleotide-binding domain M478_RS05975 PF13545 Crp-like helix-turn-helix domain M478_RS05980 PF00582 Universal stress protein family M478_RS05985 PF02233 NAD(P) transhydrogenase beta subunit M478_RS05990 PF01262 Alanine dehydrogenase/PNT, C-terminal domain M478_RS05990 PF05222 Alanine dehydrogenase/PNT, N-terminal domain M478_RS05990 PF12769 Domain of unknown function (DUF3814) M478_RS06000 PF07338 Protein of unknown function (DUF1471) M478_RS06005 PF13520 Amino acid permease M478_RS06015 PF00072 Response regulator receiver domain M478_RS06015 PF00486 Transcriptional regulatory protein, C terminal M478_RS06020 PF00512 His Kinase A (phospho-acceptor) domain M478_RS06020 PF00672 HAMP domain M478_RS06020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M478_RS06025 PF02074 Carboxypeptidase Taq (M32) metallopeptidase M478_RS06030 PF01797 Transposase IS200 like M478_RS06040 PF01695 IstB-like ATP binding protein M478_RS06045 PF00265 Thymidine kinase M478_RS06050 PF00816 H-NS histone family M478_RS06055 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M478_RS06055 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M478_RS06055 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M478_RS06060 PF00072 Response regulator receiver domain M478_RS06065 PF02810 SEC-C motif M478_RS06070 PF00551 Formyl transferase M478_RS06070 PF01842 ACT domain M478_RS06075 PF00872 M478_RS06075 M478_RS06090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M478_RS06095 PF03372 Endonuclease/Exonuclease/phosphatase family M478_RS06100 PF00293 NUDIX domain M478_RS06105 PF07383 M478_RS06105 M478_RS06110 PF01131 DNA topoisomerase M478_RS06110 PF01751 Toprim domain M478_RS06115 PF00586 AIR synthase related protein, N-terminal domain M478_RS06115 PF02769 AIR synthase related protein, C-terminal domain M478_RS06120 PF00881 Nitroreductase family M478_RS06125 PF01343 Peptidase family S49 M478_RS06130 PF00710 Asparaginase M478_RS06135 PF00857 Isochorismatase family M478_RS06140 PF07023 M478_RS06140 M478_RS06145 PF01641 SelR domain M478_RS06150 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M478_RS06150 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M478_RS06155 PF01263 Aldose 1-epimerase M478_RS06160 PF06629 M478_RS06160 M478_RS06165 PF06798 M478_RS06165 M478_RS06165 PF08298 PrkA AAA domain M478_RS06170 PF04285 M478_RS06170 M478_RS06175 PF00892 EamA-like transporter family M478_RS06180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M478_RS06180 PF03466 LysR substrate binding domain M478_RS06185 PF02678 Pirin M478_RS06185 PF05726 Pirin C-terminal cupin domain M478_RS06190 PF07690 Major Facilitator Superfamily M478_RS06195 PF01266 FAD dependent oxidoreductase M478_RS06200 PF04293 M478_RS06200 M478_RS06205 PF00392 Bacterial regulatory proteins, gntR family M478_RS06205 PF07840 FadR C-terminal domain M478_RS06215 PF02600 Disulfide bond formation protein DsbB M478_RS06230 PF00266 Aminotransferase class-V M478_RS06235 PF07690 Major Facilitator Superfamily M478_RS06250 PF02413 M478_RS06250 M478_RS06265 PF09327 M478_RS06265 M478_RS06265 PF13550 M478_RS06265 M478_RS06280 PF06805 M478_RS06280 M478_RS06290 PF13248 M478_RS06290 M478_RS06295 PF02498 M478_RS06295 M478_RS06305 PF03869 Arc-like DNA binding domain M478_RS06315 PF00877 NlpC/P60 family M478_RS06315 PF14464 Prokaryotic homologs of the JAB domain M478_RS06320 PF05100 M478_RS06320 M478_RS06325 PF05939 M478_RS06325 M478_RS06330 PF06791 M478_RS06330 M478_RS06330 PF09718 M478_RS06330 M478_RS06335 PF08809 M478_RS06335 M478_RS06340 PF08748 M478_RS06340 M478_RS06345 PF02368 Bacterial Ig-like domain (group 2) M478_RS06345 PF08813 M478_RS06345 M478_RS06350 PF13554 Bacteriophage related domain of unknown function M478_RS06375 PF02368 Bacterial Ig-like domain (group 2) M478_RS06390 PF13264 M478_RS06390 M478_RS06405 PF00872 M478_RS06405 M478_RS06415 PF10045 M478_RS06415 M478_RS06425 PF03374 M478_RS06425 M478_RS06430 PF03245 M478_RS06430 M478_RS06435 PF00959 Phage lysozyme M478_RS06440 PF16080 M478_RS06440 M478_RS06460 PF02498 M478_RS06460 M478_RS06465 PF10554 M478_RS06465 M478_RS06470 PF06530 M478_RS06470 M478_RS06475 PF05766 M478_RS06475 M478_RS06480 PF05772 NinB protein M478_RS06485 PF02086 D12 class N6 adenine-specific DNA methyltransferase M478_RS06490 PF06806 Putative excisionase (DUF1233) M478_RS06495 PF01695 IstB-like ATP binding protein M478_RS06500 PF00665 Integrase core domain M478_RS06500 PF02796 Helix-turn-helix domain of resolvase M478_RS06505 PF00589 Phage integrase family M478_RS06505 PF12167 M478_RS06505 M478_RS06510 PF03692 M478_RS06510 M478_RS06515 PF01557 Fumarylacetoacetate (FAA) hydrolase family M478_RS06520 PF13406 Transglycosylase SLT domain M478_RS06525 PF05166 YcgL domain M478_RS06530 PF03775 Septum formation inhibitor MinC, C-terminal domain M478_RS06530 PF05209 Septum formation inhibitor MinC, N-terminal domain M478_RS06535 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain M478_RS06540 PF03776 Septum formation topological specificity factor MinE M478_RS06545 PF00570 HRDC domain M478_RS06545 PF01612 3'-5' exonuclease M478_RS06550 PF00501 AMP-binding enzyme M478_RS06550 PF13193 AMP-binding enzyme C-terminal domain M478_RS06560 PF00814 Glycoprotease family M478_RS06565 PF00270 DEAD/DEAH box helicase M478_RS06565 PF06733 DEAD_2 M478_RS06565 PF13307 Helicase C-terminal domain M478_RS06570 PF01042 Endoribonuclease L-PSP M478_RS06575 PF00893 Small Multidrug Resistance protein M478_RS06580 PF00893 Small Multidrug Resistance protein M478_RS06585 PF01081 KDPG and KHG aldolase M478_RS06590 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain M478_RS06590 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain M478_RS06595 PF01380 SIS domain M478_RS06595 PF01418 Helix-turn-helix domain, rpiR family M478_RS06600 PF00224 Pyruvate kinase, barrel domain M478_RS06600 PF02887 Pyruvate kinase, alpha/beta domain M478_RS06605 PF03279 M478_RS06605 M478_RS06610 PF01551 Peptidase family M23 M478_RS06610 PF04225 Opacity-associated protein A LysM-like domain M478_RS06610 PF08525 M478_RS06610 M478_RS06615 PF01297 Periplasmic solute binding protein family M478_RS06620 PF00005 ABC transporter M478_RS06625 PF00950 M478_RS06625 M478_RS06630 PF05491 Holliday junction DNA helicase ruvB C-terminus M478_RS06630 PF05496 Holliday junction DNA helicase ruvB N-terminus M478_RS06635 PF01330 RuvA N terminal domain M478_RS06635 PF07499 RuvA, C-terminal domain M478_RS06635 PF14520 Helix-hairpin-helix domain M478_RS06640 PF02075 Crossover junction endodeoxyribonuclease RuvC M478_RS06645 PF01709 Transcriptional regulator M478_RS06650 PF00293 NUDIX domain M478_RS06655 PF00152 tRNA synthetases class II (D, K and N) M478_RS06655 PF01336 OB-fold nucleic acid binding domain M478_RS06655 PF02938 GAD domain M478_RS06660 PF01904 Protein of unknown function DUF72 M478_RS06665 PF01124 MAPEG family M478_RS06670 PF13649 Methyltransferase domain M478_RS06675 PF08003 Protein of unknown function (DUF1698) M478_RS06680 PF03932 CutC family M478_RS06685 PF06185 YecM protein M478_RS06695 PF00750 tRNA synthetases class I (R) M478_RS06695 PF03485 Arginyl tRNA synthetase N terminal domain M478_RS06695 PF05746 DALR anticodon binding domain M478_RS06700 PF05860 haemagglutination activity domain M478_RS06700 PF13332 M478_RS06700 M478_RS06705 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB M478_RS06705 PF08479 POTRA domain, ShlB-type M478_RS06710 PF03023 M478_RS06710 M478_RS06715 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M478_RS06720 PF13302 Acetyltransferase (GNAT) domain M478_RS06725 PF07690 Major Facilitator Superfamily M478_RS06730 PF07273 Protein of unknown function (DUF1439) M478_RS06735 PF02613 Nitrate reductase delta subunit M478_RS06740 PF02811 PHP domain M478_RS06750 PF00480 ROK family M478_RS06750 PF13412 Winged helix-turn-helix DNA-binding M478_RS06755 PF03009 Glycerophosphoryl diester phosphodiesterase family M478_RS06760 PF00005 ABC transporter M478_RS06765 PF01797 Transposase IS200 like M478_RS06770 PF00005 ABC transporter M478_RS06775 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS06780 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS06785 PF13416 Bacterial extracellular solute-binding protein M478_RS06790 PF03009 Glycerophosphoryl diester phosphodiesterase family M478_RS06805 PF00916 M478_RS06805 M478_RS06805 PF01740 STAS domain M478_RS06810 PF00793 DAHP synthetase I family M478_RS06815 PF13369 M478_RS06815 M478_RS06815 PF13371 Tetratricopeptide repeat M478_RS06820 PF04247 M478_RS06820 M478_RS06825 PF13847 Methyltransferase domain M478_RS06830 PF00472 RF-1 domain M478_RS06830 PF03462 PCRF domain M478_RS06835 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain M478_RS06835 PF01488 Shikimate / quinate 5-dehydrogenase M478_RS06835 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain M478_RS06840 PF03550 Outer membrane lipoprotein LolB M478_RS06845 PF00288 GHMP kinases N terminal domain M478_RS06845 PF08544 GHMP kinases C terminal M478_RS06855 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M478_RS06855 PF14572 Phosphoribosyl synthetase-associated domain M478_RS06865 PF10762 M478_RS06865 M478_RS06870 PF01195 Peptidyl-tRNA hydrolase M478_RS06875 PF01926 50S ribosome-binding GTPase M478_RS06875 PF06071 Protein of unknown function (DUF933) M478_RS06885 PF00665 Integrase core domain M478_RS06890 PF00581 Rhodanese-like domain M478_RS06895 PF07859 alpha/beta hydrolase fold M478_RS06905 PF13316 M478_RS06905 M478_RS06910 PF14358 M478_RS06910 M478_RS06915 PF12682 Flavodoxin M478_RS06920 PF01738 Dienelactone hydrolase family M478_RS06925 PF00072 Response regulator receiver domain M478_RS06925 PF00486 Transcriptional regulatory protein, C terminal M478_RS06930 PF00512 His Kinase A (phospho-acceptor) domain M478_RS06930 PF00672 HAMP domain M478_RS06930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M478_RS06935 PF02627 Carboxymuconolactone decarboxylase family M478_RS06940 PF07883 Cupin domain M478_RS06945 PF12697 Alpha/beta hydrolase family M478_RS06950 PF13646 HEAT repeats M478_RS06965 PF00106 short chain dehydrogenase M478_RS06970 PF08242 Methyltransferase domain M478_RS06975 PF02502 Ribose/Galactose Isomerase M478_RS06975 PF12408 Ribose-5-phosphate isomerase M478_RS06985 PF13226 M478_RS06985 M478_RS06990 PF07661 M478_RS06990 M478_RS06990 PF08238 Sel1 repeat M478_RS06995 PF00872 M478_RS06995 M478_RS07010 PF04101 Glycosyltransferase family 28 C-terminal domain M478_RS07020 PF13506 Glycosyl transferase family 21 M478_RS07025 PF01370 NAD dependent epimerase/dehydratase family M478_RS07035 PF00753 Metallo-beta-lactamase superfamily M478_RS07040 PF01370 NAD dependent epimerase/dehydratase family M478_RS07045 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M478_RS07050 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M478_RS07055 PF00425 chorismate binding enzyme M478_RS07060 PF05962 HutD M478_RS07065 PF01979 Amidohydrolase family M478_RS07070 PF00392 Bacterial regulatory proteins, gntR family M478_RS07070 PF07702 UTRA domain M478_RS07075 PF01979 Amidohydrolase family M478_RS07080 PF05013 N-formylglutamate amidohydrolase M478_RS07085 PF01695 IstB-like ATP binding protein M478_RS07095 PF00665 Integrase core domain M478_RS07095 PF02796 Helix-turn-helix domain of resolvase M478_RS07125 PF00005 ABC transporter M478_RS07130 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS07135 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS07140 PF01547 Bacterial extracellular solute-binding protein M478_RS07145 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M478_RS07155 PF00392 Bacterial regulatory proteins, gntR family M478_RS07155 PF07702 UTRA domain M478_RS07180 PF13676 TIR domain M478_RS07185 PF14384 M478_RS07185 M478_RS07190 PF04365 Protein of unknown function (DUF497) M478_RS07195 PF04717 Phage-related baseplate assembly protein M478_RS07200 PF04965 Gene 25-like lysozyme M478_RS07215 PF10908 M478_RS07215 M478_RS07230 PF01527 Transposase M478_RS07235 PF00665 Integrase core domain M478_RS07235 PF13565 M478_RS07235 M478_RS07240 PF05638 Protein of unknown function (DUF796) M478_RS07260 PF03796 DnaB-like helicase C terminal domain M478_RS07285 PF01066 CDP-alcohol phosphatidyltransferase M478_RS07290 PF01541 GIY-YIG catalytic domain M478_RS07290 PF02151 UvrB/uvrC motif M478_RS07290 PF08459 UvrC Helix-hairpin-helix N-terminal M478_RS07290 PF14520 Helix-hairpin-helix domain M478_RS07295 PF00072 Response regulator receiver domain M478_RS07295 PF00196 Bacterial regulatory proteins, luxR family M478_RS07300 PF10769 M478_RS07300 M478_RS07305 PF06942 M478_RS07305 M478_RS07315 PF13505 Outer membrane protein beta-barrel domain M478_RS07325 PF00324 Amino acid permease M478_RS07330 PF01344 Kelch motif M478_RS07335 PF03358 NADPH-dependent FMN reductase M478_RS07340 PF04261 Dyp-type peroxidase family M478_RS07345 PF09375 Imelysin M478_RS07345 PF13473 Cupredoxin-like domain M478_RS07350 PF03239 M478_RS07350 M478_RS07355 PF00474 Sodium:solute symporter family M478_RS07365 PF00171 Aldehyde dehydrogenase family M478_RS07365 PF01619 Proline dehydrogenase M478_RS07365 PF14850 DNA-binding domain of Proline dehydrogenase M478_RS07380 PF00005 ABC transporter M478_RS07385 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS07390 PF00497 Bacterial extracellular solute-binding proteins, family 3 M478_RS07395 PF00291 Pyridoxal-phosphate dependent enzyme M478_RS07400 PF02899 Phage integrase, N-terminal SAM-like domain M478_RS07405 PF04539 Sigma-70 region 3 M478_RS07405 PF04542 Sigma-70 region 2 M478_RS07405 PF04545 Sigma-70, region 4 M478_RS07410 PF00669 Bacterial flagellin N-terminal helical region M478_RS07410 PF00700 Bacterial flagellin C-terminal helical region M478_RS07415 PF02465 M478_RS07415 M478_RS07415 PF07195 M478_RS07415 M478_RS07415 PF07196 Flagellin hook IN motif M478_RS07420 PF02561 Flagellar protein FliS M478_RS07425 PF05400 Flagellar protein FliT M478_RS07435 PF12833 Helix-turn-helix domain M478_RS07445 PF13487 HD domain M478_RS07450 PF00730 HhH-GPD superfamily base excision DNA repair protein M478_RS07455 PF02661 Fic/DOC family M478_RS07465 PF02049 M478_RS07465 M478_RS07470 PF01514 Secretory protein of YscJ/FliF family M478_RS07470 PF08345 M478_RS07470 M478_RS07475 PF01706 FliG C-terminal domain M478_RS07475 PF14841 FliG middle domain M478_RS07475 PF14842 FliG N-terminal domain M478_RS07480 PF02108 M478_RS07480 M478_RS07485 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M478_RS07490 PF02050 Flagellar FliJ protein M478_RS07495 PF02120 Flagellar hook-length control protein FliK M478_RS07500 PF03748 M478_RS07500 M478_RS07505 PF01052 Surface presentation of antigens (SPOA) M478_RS07505 PF02154 Flagellar motor switch protein FliM M478_RS07510 PF01052 Surface presentation of antigens (SPOA) M478_RS07510 PF16973 M478_RS07510 M478_RS07515 PF04347 M478_RS07515 M478_RS07520 PF00813 M478_RS07520 M478_RS07525 PF01313 M478_RS07525 M478_RS07530 PF01311 M478_RS07530 M478_RS07535 PF07927 YcfA-like protein M478_RS07540 PF15919 M478_RS07540 M478_RS07545 PF00294 pfkB family carbohydrate kinase M478_RS07550 PF02653 M478_RS07550 M478_RS07555 PF00005 ABC transporter M478_RS07560 PF13407 Periplasmic binding protein domain M478_RS07565 PF02653 M478_RS07565 M478_RS07570 PF00596 Class II Aldolase and Adducin N-terminal domain M478_RS07570 PF13561 Enoyl-(Acyl carrier protein) reductase M478_RS07575 PF04198 Putative sugar-binding domain M478_RS07580 PF00669 Bacterial flagellin N-terminal helical region M478_RS07585 PF00460 Flagella basal body rod protein M478_RS07585 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M478_RS07590 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase M478_RS07590 PF10135 M478_RS07590 M478_RS07595 PF02119 M478_RS07595 M478_RS07600 PF02107 M478_RS07600 M478_RS07610 PF00460 Flagella basal body rod protein M478_RS07615 PF00460 Flagella basal body rod protein M478_RS07615 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M478_RS07615 PF07559 Flagellar basal body protein FlaE M478_RS07620 PF03963 M478_RS07620 M478_RS07620 PF13860 FlgD Ig-like domain M478_RS07620 PF13861 FlgD Tudor-like domain M478_RS07625 PF00460 Flagella basal body rod protein M478_RS07625 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M478_RS07630 PF00460 Flagella basal body rod protein M478_RS07635 PF13144 SAF-like M478_RS07640 PF04316 Anti-sigma-28 factor, FlgM M478_RS07645 PF05130 FlgN protein M478_RS07650 PF02369 Bacterial Ig-like domain (group 1) M478_RS07650 PF07979 Intimin C-type lectin domain M478_RS07650 PF09134 Invasin, domain 3 M478_RS07650 PF11924 Protein of unknown function (DUF3442) M478_RS07655 PF01797 Transposase IS200 like M478_RS07660 PF11924 Protein of unknown function (DUF3442) M478_RS07665 PF06366 M478_RS07665 M478_RS07670 PF00771 FHIPEP family M478_RS07675 PF01312 FlhB HrpN YscU SpaS Family M478_RS07685 PF07377 Protein of unknown function (DUF1493) M478_RS07695 PF10709 M478_RS07695 M478_RS07700 PF05425 M478_RS07700 M478_RS07705 PF04234 CopC domain M478_RS07710 PF00210 Ferritin-like domain M478_RS07715 PF06440 DNA polymerase III, theta subunit M478_RS07720 PF00561 alpha/beta hydrolase fold M478_RS07725 PF00326 Prolyl oligopeptidase family M478_RS07725 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain M478_RS07730 PF13995 YebF-like protein M478_RS07735 PF04266 ASCH domain M478_RS07740 PF07130 YebG protein M478_RS07745 PF00270 DEAD/DEAH box helicase M478_RS07745 PF00271 Helicase conserved C-terminal domain M478_RS07745 PF03880 DbpA RNA binding domain M478_RS07750 PF02222 ATP-grasp domain M478_RS07755 PF03701 M478_RS07755 M478_RS07760 PF00425 chorismate binding enzyme M478_RS07760 PF04715 Anthranilate synthase component I, N terminal region M478_RS07765 PF00293 NUDIX domain M478_RS07770 PF03313 M478_RS07770 M478_RS07770 PF03315 Serine dehydratase beta chain M478_RS07775 PF01613 Flavin reductase like domain M478_RS07780 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal M478_RS07780 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal M478_RS07785 PF07690 Major Facilitator Superfamily M478_RS07785 PF11700 M478_RS07785 M478_RS07790 PF03328 HpcH/HpaI aldolase/citrate lyase family M478_RS07800 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase M478_RS07805 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase M478_RS07810 PF00171 Aldehyde dehydrogenase family M478_RS07815 PF01557 Fumarylacetoacetate (FAA) hydrolase family M478_RS07820 PF01557 Fumarylacetoacetate (FAA) hydrolase family M478_RS07825 PF01047 MarR family M478_RS07835 PF03610 PTS system fructose IIA component M478_RS07835 PF03830 PTS system sorbose subfamily IIB component M478_RS07840 PF03609 M478_RS07840 M478_RS07845 PF03613 M478_RS07845 M478_RS07850 PF06173 M478_RS07850 M478_RS07855 PF02659 M478_RS07855 M478_RS07860 PF00593 TonB dependent receptor M478_RS07860 PF07715 TonB-dependent Receptor Plug Domain M478_RS07875 PF13847 Methyltransferase domain M478_RS07880 PF02578 Multi-copper polyphenol oxidoreductase laccase M478_RS07885 PF00313 'Cold-shock' DNA-binding domain M478_RS07890 PF10736 M478_RS07890 M478_RS07900 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP M478_RS07905 PF00324 Amino acid permease M478_RS07910 PF13269 M478_RS07910 M478_RS07915 PF10765 Protein of unknown function (DUF2591) M478_RS07920 PF13974 M478_RS07920 M478_RS07925 PF13996 M478_RS07925 M478_RS07930 PF10964 M478_RS07930 M478_RS07940 PF12833 Helix-turn-helix domain M478_RS07950 PF00005 ABC transporter M478_RS07950 PF00664 ABC transporter transmembrane region M478_RS07955 PF01163 RIO1 family M478_RS07960 PF03795 YCII-related domain M478_RS07965 PF06167 Glucose-regulated metallo-peptidase M90 M478_RS07980 PF01695 IstB-like ATP binding protein M478_RS07990 PF00665 Integrase core domain M478_RS07990 PF02796 Helix-turn-helix domain of resolvase M478_RS07995 PF00356 Bacterial regulatory proteins, lacI family M478_RS07995 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family M478_RS08000 PF00872 M478_RS08000 M478_RS08005 PF01306 LacY proton/sugar symporter M478_RS08010 PF02065 Melibiase M478_RS08010 PF16875 M478_RS08010 M478_RS08020 PF01648 4'-phosphopantetheinyl transferase superfamily M478_RS08025 PF03480 Bacterial extracellular solute-binding protein, family 7 M478_RS08030 PF04290 M478_RS08030 M478_RS08035 PF06808 M478_RS08035 M478_RS08040 PF00072 Response regulator receiver domain M478_RS08040 PF00196 Bacterial regulatory proteins, luxR family M478_RS08050 PF09831 M478_RS08050 M478_RS08060 PF01522 Polysaccharide deacetylase M478_RS08065 PF07690 Major Facilitator Superfamily M478_RS08070 PF01554 MatE M478_RS08075 PF00764 Arginosuccinate synthase M478_RS08080 PF01070 FMN-dependent dehydrogenase M478_RS08085 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M478_RS08085 PF13378 Enolase C-terminal domain-like M478_RS08090 PF01557 Fumarylacetoacetate (FAA) hydrolase family M478_RS08095 PF13561 Enoyl-(Acyl carrier protein) reductase M478_RS08100 PF04134 M478_RS08100 M478_RS08105 PF07690 Major Facilitator Superfamily M478_RS08110 PF02369 Bacterial Ig-like domain (group 1) M478_RS08110 PF09134 Invasin, domain 3 M478_RS08110 PF11924 Protein of unknown function (DUF3442) M478_RS08115 PF00872 M478_RS08115 M478_RS08120 PF04363 M478_RS08120 M478_RS08125 PF07993 Male sterility protein M478_RS08130 PF00929 Exonuclease M478_RS08130 PF08411 Exonuclease C-terminal M478_RS08135 PF13520 Amino acid permease M478_RS08145 PF00465 Iron-containing alcohol dehydrogenase M478_RS08150 PF00005 ABC transporter M478_RS08155 PF00005 ABC transporter M478_RS08160 PF02653 M478_RS08160 M478_RS08165 PF16695 M478_RS08165 M478_RS08170 PF01370 NAD dependent epimerase/dehydratase family M478_RS08175 PF01634 ATP phosphoribosyltransferase M478_RS08175 PF08029 HisG, C-terminal domain M478_RS08180 PF00815 Histidinol dehydrogenase M478_RS08185 PF00155 Aminotransferase class I and II M478_RS08190 PF00475 Imidazoleglycerol-phosphate dehydratase M478_RS08190 PF13242 HAD-hyrolase-like M478_RS08195 PF00117 Glutamine amidotransferase class-I M478_RS08200 PF00977 Histidine biosynthesis protein M478_RS08205 PF00977 Histidine biosynthesis protein M478_RS08210 PF01502 Phosphoribosyl-AMP cyclohydrolase M478_RS08210 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase M478_RS08215 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain M478_RS08215 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M478_RS08220 PF00483 Nucleotidyl transferase M478_RS08225 PF00483 Nucleotidyl transferase M478_RS08235 PF00593 TonB dependent receptor M478_RS08235 PF07715 TonB-dependent Receptor Plug Domain M478_RS08240 PF01497 Periplasmic binding protein M478_RS08245 PF01032 FecCD transport family M478_RS08250 PF01032 FecCD transport family M478_RS08255 PF00005 ABC transporter M478_RS08260 PF04183 IucA / IucC family M478_RS08260 PF06276 Ferric iron reductase FhuF-like transporter M478_RS08265 PF13523 Acetyltransferase (GNAT) domain M478_RS08270 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) M478_RS08275 PF00282 Pyridoxal-dependent decarboxylase conserved domain M478_RS08280 PF06276 Ferric iron reductase FhuF-like transporter M478_RS08280 PF11575 M478_RS08280 M478_RS08285 PF00571 CBS domain M478_RS08285 PF03471 Transporter associated domain M478_RS08285 PF03741 M478_RS08285 M478_RS08290 PF05170 M478_RS08290 M478_RS08290 PF13502 M478_RS08290 M478_RS08295 PF00692 dUTPase M478_RS08300 PF00485 Phosphoribulokinase / Uridine kinase family M478_RS08305 PF10609 ParA/MinD ATPase like M478_RS08310 PF01588 Putative tRNA binding domain M478_RS08310 PF09334 tRNA synthetases class I (M) M478_RS08315 PF01797 Transposase IS200 like M478_RS08330 PF13407 Periplasmic binding protein domain M478_RS08335 PF08309 M478_RS08335 M478_RS08340 PF07690 Major Facilitator Superfamily M478_RS08345 PF03788 M478_RS08345 M478_RS08350 PF04172 M478_RS08350 M478_RS08355 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M478_RS08355 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region M478_RS08360 PF00390 Malic enzyme, N-terminal domain M478_RS08360 PF03949 Malic enzyme, NAD binding domain M478_RS08365 PF02698 DUF218 domain M478_RS08370 PF02653 M478_RS08370 M478_RS08375 PF00005 ABC transporter M478_RS08380 PF13407 Periplasmic binding protein domain M478_RS08385 PF04235 M478_RS08385 M478_RS08390 PF01227 GTP cyclohydrolase I M478_RS08395 PF06779 M478_RS08395 M478_RS08400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M478_RS08400 PF03466 LysR substrate binding domain M478_RS08405 PF00107 Zinc-binding dehydrogenase M478_RS08405 PF08240 Alcohol dehydrogenase GroES-like domain M478_RS08410 PF00756 Putative esterase M478_RS08425 PF13437 HlyD family secretion protein M478_RS08430 PF00005 ABC transporter M478_RS08435 PF04055 Radical SAM superfamily M478_RS08440 PF00994 Probable molybdopterin binding domain M478_RS08440 PF03453 MoeA N-terminal region (domain I and II) M478_RS08440 PF03454 MoeA C-terminal region (domain IV) M478_RS08445 PF00899 ThiF family M478_RS08450 PF00872 M478_RS08450 M478_RS08455 PF16809 M478_RS08455 M478_RS08460 PF00005 ABC transporter M478_RS08460 PF12848 ABC transporter M478_RS08465 PF16809 M478_RS08465 M478_RS08470 PF06812 M478_RS08470 M478_RS08470 PF12486 M478_RS08470 M478_RS08475 PF04965 Gene 25-like lysozyme M478_RS08480 PF12790 Type VI secretion lipoprotein M478_RS08485 PF06996 M478_RS08485 M478_RS08490 PF05947 M478_RS08490 M478_RS08500 PF05488 PAAR motif M478_RS08500 PF15607 M478_RS08500 M478_RS08505 PF06812 M478_RS08505 M478_RS08505 PF16989 M478_RS08505 M478_RS08510 PF06744 M478_RS08510 M478_RS08510 PF06761 M478_RS08510 M478_RS08520 PF13592 M478_RS08520 M478_RS08530 PF01551 Peptidase family M23 M478_RS08535 PF10106 M478_RS08535 M478_RS08545 PF01551 Peptidase family M23 M478_RS08550 PF05954 Phage late control gene D protein (GPD) M478_RS08550 PF10106 M478_RS08550 M478_RS08550 PF13296 M478_RS08550 M478_RS08555 PF00004 ATPase family associated with various cellular activities (AAA) M478_RS08555 PF07724 AAA domain (Cdc48 subfamily) M478_RS08555 PF10431 C-terminal, D2-small domain, of ClpB protein M478_RS08560 PF05638 Protein of unknown function (DUF796) M478_RS08565 PF00691 OmpA family M478_RS08570 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) M478_RS08575 PF05936 M478_RS08575 M478_RS08580 PF05943 M478_RS08580 M478_RS08585 PF05591 M478_RS08585 M478_RS08595 PF00698 Acyl transferase domain M478_RS08600 PF00550 Phosphopantetheine attachment site M478_RS08605 PF13924 M478_RS08605 M478_RS08610 PF13561 Enoyl-(Acyl carrier protein) reductase M478_RS08615 PF00378 Enoyl-CoA hydratase/isomerase family M478_RS08620 PF00378 Enoyl-CoA hydratase/isomerase family M478_RS08625 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal M478_RS08625 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal M478_RS08630 PF13561 Enoyl-(Acyl carrier protein) reductase M478_RS08635 PF00109 Beta-ketoacyl synthase, N-terminal domain M478_RS08635 PF02801 Beta-ketoacyl synthase, C-terminal domain M478_RS08640 PF07977 FabA-like domain M478_RS08650 PF13561 Enoyl-(Acyl carrier protein) reductase M478_RS08655 PF01565 FAD binding domain M478_RS08655 PF13480 Acetyltransferase (GNAT) domain M478_RS08675 PF13610 M478_RS08675 M478_RS08685 PF04358 DsrC like protein M478_RS08690 PF00708 Acylphosphatase M478_RS08695 PF10672 S-adenosylmethionine-dependent methyltransferase M478_RS08700 PF08755 Hemimethylated DNA-binding protein YccV like M478_RS08705 PF13380 CoA binding domain M478_RS08710 PF09829 M478_RS08710 M478_RS08715 PF02142 MGS-like domain M478_RS08720 PF00580 UvrD/REP helicase N-terminal domain M478_RS08720 PF12462 M478_RS08720 M478_RS08720 PF13361 UvrD-like helicase C-terminal domain M478_RS08725 PF03733 M478_RS08725 M478_RS08730 PF12805 M478_RS08730 M478_RS08730 PF13515 M478_RS08730 M478_RS08735 PF04993 TfoX N-terminal domain M478_RS08735 PF04994 TfoX C-terminal domain M478_RS08740 PF03846 Cell division inhibitor SulA M478_RS08745 PF00691 OmpA family M478_RS08745 PF01389 OmpA-like transmembrane domain M478_RS08755 PF01797 Transposase IS200 like M478_RS08760 PF06303 Organiser of macrodomain of Terminus of chromosome M478_RS08765 PF05362 Lon protease (S16) C-terminal proteolytic domain M478_RS08765 PF13654 AAA domain M478_RS08770 PF07977 FabA-like domain M478_RS08780 PF00109 Beta-ketoacyl synthase, N-terminal domain M478_RS08785 PF00665 Integrase core domain M478_RS08785 PF02796 Helix-turn-helix domain of resolvase M478_RS08790 PF01695 IstB-like ATP binding protein M478_RS08795 PF00109 Beta-ketoacyl synthase, N-terminal domain M478_RS08795 PF02801 Beta-ketoacyl synthase, C-terminal domain M478_RS08800 PF01797 Transposase IS200 like M478_RS08810 PF04957 Ribosome modulation factor M478_RS08820 PF03886 Protein of unknown function (DUF330) M478_RS08825 PF02470 M478_RS08825 M478_RS08830 PF04403 M478_RS08830 M478_RS08835 PF00005 ABC transporter M478_RS08835 PF12848 ABC transporter M478_RS08835 PF16326 M478_RS08835 M478_RS08840 PF01170 Putative RNA methylase family UPF0020 M478_RS08840 PF02926 THUMP domain M478_RS08840 PF10672 S-adenosylmethionine-dependent methyltransferase M478_RS08845 PF00111 2Fe-2S iron-sulfur cluster binding domain M478_RS08845 PF03473 MOSC domain M478_RS08845 PF03476 MOSC N-terminal beta barrel domain M478_RS08850 PF07126 M478_RS08850 M478_RS08855 PF01180 Dihydroorotate dehydrogenase M478_RS08860 PF01433 Peptidase family M1 M478_RS08860 PF11940 Domain of unknown function (DUF3458) M478_RS08865 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family M478_RS08870 PF00152 tRNA synthetases class II (D, K and N) M478_RS08870 PF01336 OB-fold nucleic acid binding domain M478_RS08875 PF00267 Gram-negative porin M478_RS08880 PF00155 Aminotransferase class I and II M478_RS08885 PF00753 Metallo-beta-lactamase superfamily M478_RS08890 PF05951 M478_RS08890 M478_RS08895 PF01471 Putative peptidoglycan binding domain M478_RS08895 PF03734 L,D-transpeptidase catalytic domain M478_RS08900 PF01797 Transposase IS200 like M478_RS08910 PF04310 MukB N-terminal M478_RS08910 PF13558 Putative exonuclease SbcCD, C subunit M478_RS08910 PF16330 M478_RS08910 M478_RS08915 PF04288 MukE-like family M478_RS08920 PF03882 KicB killing factor M478_RS08920 PF17192 M478_RS08920 M478_RS08920 PF17193 M478_RS08920 M478_RS08925 PF13847 Methyltransferase domain M478_RS08935 PF03881 Fructosamine kinase M478_RS08940 PF02348 Cytidylyltransferase M478_RS08945 PF03966 Trm112p-like protein M478_RS08950 PF00313 'Cold-shock' DNA-binding domain M478_RS08955 PF07063 Domain of unknown function (DUF1338) M478_RS08960 PF02606 Tetraacyldisaccharide-1-P 4'-kinase M478_RS08965 PF00005 ABC transporter M478_RS08965 PF00664 ABC transporter transmembrane region M478_RS08970 PF00753 Metallo-beta-lactamase superfamily M478_RS08970 PF03772 M478_RS08970 M478_RS08970 PF13567 M478_RS08970 M478_RS08980 PF00216 Bacterial DNA-binding protein M478_RS08985 PF00575 S1 RNA binding domain M478_RS08990 PF02224 Cytidylate kinase M478_RS08995 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M478_RS09000 PF00266 Aminotransferase class-V M478_RS09005 PF03895 YadA-like C-terminal region M478_RS09010 PF03895 YadA-like C-terminal region M478_RS09010 PF05662 Coiled stalk of trimeric autotransporter adhesin M478_RS09015 PF00710 Asparaginase M478_RS09020 PF02624 YcaO-like family M478_RS09025 PF01226 Formate/nitrite transporter M478_RS09030 PF01228 Glycine radical M478_RS09030 PF02901 Pyruvate formate lyase M478_RS09035 PF01755 M478_RS09035 M478_RS09040 PF04055 Radical SAM superfamily M478_RS09040 PF13353 4Fe-4S single cluster domain M478_RS09045 PF07690 Major Facilitator Superfamily M478_RS09050 PF00665 Integrase core domain M478_RS09050 PF02796 Helix-turn-helix domain of resolvase M478_RS09055 PF01695 IstB-like ATP binding protein M478_RS09060 PF07690 Major Facilitator Superfamily M478_RS09065 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M478_RS09065 PF02403 Seryl-tRNA synthetase N-terminal domain M478_RS09070 PF00004 ATPase family associated with various cellular activities (AAA) M478_RS09070 PF12002 MgsA AAA+ ATPase C terminal M478_RS09070 PF16193 M478_RS09070 M478_RS09075 PF03548 Outer membrane lipoprotein carrier protein LolA M478_RS09080 PF01580 FtsK/SpoIIIE family M478_RS09080 PF09397 Ftsk gamma domain M478_RS09080 PF13491 M478_RS09080 M478_RS09085 PF01037 AsnC family M478_RS09085 PF13412 Winged helix-turn-helix DNA-binding M478_RS09090 PF07992 Pyridine nucleotide-disulphide oxidoreductase M478_RS09100 PF00005 ABC transporter M478_RS09100 PF00664 ABC transporter transmembrane region M478_RS09105 PF00005 ABC transporter M478_RS09105 PF00664 ABC transporter transmembrane region M478_RS09110 PF03588 Leucyl/phenylalanyl-tRNA protein transferase M478_RS09115 PF01176 Translation initiation factor 1A / IF-1 M478_RS09120 PF01797 Transposase IS200 like M478_RS09125 PF00004 ATPase family associated with various cellular activities (AAA) M478_RS09125 PF02861 Clp amino terminal domain M478_RS09125 PF07724 AAA domain (Cdc48 subfamily) M478_RS09125 PF10431 C-terminal, D2-small domain, of ClpB protein M478_RS09130 PF02617 ATP-dependent Clp protease adaptor protein ClpS M478_RS09135 PF00313 'Cold-shock' DNA-binding domain M478_RS09140 PF00005 ABC transporter M478_RS09140 PF02687 M478_RS09140 M478_RS09140 PF12704 MacB-like periplasmic core domain M478_RS09145 PF16576 M478_RS09145 M478_RS09150 PF04393 M478_RS09150 M478_RS09155 PF11398 Protein of unknown function (DUF2813) M478_RS09160 PF03956 M478_RS09160 M478_RS09165 PF03063 Prismane/CO dehydrogenase family M478_RS09170 PF00111 2Fe-2S iron-sulfur cluster binding domain M478_RS09170 PF00175 Oxidoreductase NAD-binding domain M478_RS09170 PF00970 Oxidoreductase FAD-binding domain M478_RS09175 PF00205 Thiamine pyrophosphate enzyme, central domain M478_RS09175 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M478_RS09175 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M478_RS09180 PF01212 Beta-eliminating lyase M478_RS09185 PF11066 M478_RS09185 M478_RS09185 PF13460 NADH(P)-binding M478_RS09190 PF01370 NAD dependent epimerase/dehydratase family M478_RS09195 PF12883 Protein of unknown function (DUF3828) M478_RS09200 PF01817 Chorismate mutase type II M478_RS09205 PF00005 ABC transporter M478_RS09210 PF00497 Bacterial extracellular solute-binding proteins, family 3 M478_RS09215 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS09220 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS09225 PF00892 EamA-like transporter family M478_RS09230 PF10100 M478_RS09230 M478_RS09235 PF03059 Nicotianamine synthase protein M478_RS09240 PF00005 ABC transporter M478_RS09250 PF01497 Periplasmic binding protein M478_RS09255 PF01145 SPFH domain / Band 7 family M478_RS09270 PF00497 Bacterial extracellular solute-binding proteins, family 3 M478_RS09275 PF05958 tRNA (Uracil-5-)-methyltransferase M478_RS09280 PF10767 M478_RS09280 M478_RS09285 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS09290 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS09295 PF00005 ABC transporter M478_RS09295 PF08402 TOBE domain M478_RS09300 PF13416 Bacterial extracellular solute-binding protein M478_RS09305 PF10722 Putative bacterial sensory transduction regulator M478_RS09315 PF07214 M478_RS09315 M478_RS09320 PF00462 Glutaredoxin M478_RS09325 PF02080 TrkA-C domain M478_RS09325 PF06826 M478_RS09325 M478_RS09330 PF01569 PAP2 superfamily M478_RS09335 PF01569 PAP2 superfamily M478_RS09340 PF01791 DeoC/LacD family aldolase M478_RS09345 PF00455 M478_RS09345 M478_RS09345 PF08220 DeoR-like helix-turn-helix domain M478_RS09350 PF03222 Tryptophan/tyrosine permease family M478_RS09360 PF00768 D-alanyl-D-alanine carboxypeptidase M478_RS09360 PF07943 Penicillin-binding protein 5, C-terminal domain M478_RS09365 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS09370 PF00005 ABC transporter M478_RS09370 PF09383 NIL domain M478_RS09375 PF03180 NLPA lipoprotein M478_RS09380 PF03171 2OG-Fe(II) oxygenase superfamily M478_RS09380 PF14226 non-haem dioxygenase in morphine synthesis N-terminal M478_RS09385 PF12710 haloacid dehalogenase-like hydrolase M478_RS09390 PF00043 Glutathione S-transferase, C-terminal domain M478_RS09390 PF13417 Glutathione S-transferase, N-terminal domain M478_RS09395 PF00593 TonB dependent receptor M478_RS09395 PF07715 TonB-dependent Receptor Plug Domain M478_RS09400 PF00005 ABC transporter M478_RS09405 PF01032 FecCD transport family M478_RS09410 PF01497 Periplasmic binding protein M478_RS09415 PF00324 Amino acid permease M478_RS09420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M478_RS09420 PF03466 LysR substrate binding domain M478_RS09425 PF03601 M478_RS09425 M478_RS09430 PF01261 Xylose isomerase-like TIM barrel M478_RS09435 PF00577 Outer membrane usher protein M478_RS09435 PF13953 PapC C-terminal domain M478_RS09435 PF13954 PapC N-terminal domain M478_RS09440 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M478_RS09440 PF02753 Pili assembly chaperone PapD, C-terminal domain M478_RS09455 PF00486 Transcriptional regulatory protein, C terminal M478_RS09460 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M478_RS09460 PF02378 Phosphotransferase system, EIIC M478_RS09465 PF00294 pfkB family carbohydrate kinase M478_RS09470 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M478_RS09470 PF00381 PTS HPr component phosphorylation site M478_RS09475 PF00293 NUDIX domain M478_RS09480 PF02653 M478_RS09480 M478_RS09485 PF00005 ABC transporter M478_RS09490 PF13407 Periplasmic binding protein domain M478_RS09495 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) M478_RS09500 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M478_RS09500 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M478_RS09505 PF00171 Aldehyde dehydrogenase family M478_RS09510 PF01557 Fumarylacetoacetate (FAA) hydrolase family M478_RS09515 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M478_RS09515 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M478_RS09520 PF13561 Enoyl-(Acyl carrier protein) reductase M478_RS09525 PF03692 M478_RS09525 M478_RS09530 PF03222 Tryptophan/tyrosine permease family M478_RS09535 PF01132 Elongation factor P (EF-P) OB domain M478_RS09535 PF08207 Elongation factor P (EF-P) KOW-like domain M478_RS09535 PF09285 Elongation factor P, C-terminal M478_RS09540 PF03786 D-mannonate dehydratase (UxuA) M478_RS09545 PF01232 Mannitol dehydrogenase Rossmann domain M478_RS09545 PF08125 Mannitol dehydrogenase C-terminal domain M478_RS09550 PF00392 Bacterial regulatory proteins, gntR family M478_RS09550 PF07729 FCD domain M478_RS09560 PF02492 CobW/HypB/UreG, nucleotide-binding domain M478_RS09560 PF07683 Cobalamin synthesis protein cobW C-terminal domain M478_RS09565 PF01569 PAP2 superfamily M478_RS09570 PF00877 NlpC/P60 family M478_RS09575 PF00563 EAL domain M478_RS09575 PF12792 M478_RS09575 M478_RS09580 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M478_RS09585 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS09590 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS09590 PF12911 M478_RS09590 M478_RS09595 PF00005 ABC transporter M478_RS09595 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M478_RS09600 PF13989 M478_RS09600 M478_RS09605 PF07690 Major Facilitator Superfamily M478_RS09610 PF00849 RNA pseudouridylate synthase M478_RS09610 PF01479 S4 domain M478_RS09615 PF00271 Helicase conserved C-terminal domain M478_RS09615 PF04851 Type III restriction enzyme, res subunit M478_RS09620 PF01386 Ribosomal L25p family M478_RS09625 PF01797 Transposase IS200 like M478_RS09635 PF04245 M478_RS09635 M478_RS09640 PF07208 Protein of unknown function (DUF1414) M478_RS09645 PF00884 Sulfatase M478_RS09645 PF11893 M478_RS09645 M478_RS09655 PF12639 DNase/tRNase domain of colicin-like bacteriocin M478_RS09670 PF00232 Glycosyl hydrolase family 1 M478_RS09675 PF01380 SIS domain M478_RS09675 PF01418 Helix-turn-helix domain, rpiR family M478_RS09680 PF07484 Phage Tail Collar Domain M478_RS09685 PF10076 M478_RS09685 M478_RS09690 PF10076 M478_RS09690 M478_RS09695 PF04865 M478_RS09695 M478_RS09700 PF07409 M478_RS09700 M478_RS09705 PF06890 Bacteriophage Mu Gp45 protein M478_RS09710 PF05954 Phage late control gene D protein (GPD) M478_RS09715 PF07157 M478_RS09715 M478_RS09725 PF10109 M478_RS09725 M478_RS09730 PF10618 M478_RS09730 M478_RS09735 PF04984 Phage tail sheath protein M478_RS09740 PF10948 M478_RS09740 M478_RS09755 PF01261 Xylose isomerase-like TIM barrel M478_RS09760 PF00455 M478_RS09760 M478_RS09760 PF08220 DeoR-like helix-turn-helix domain M478_RS09770 PF07005 Protein of unknown function, DUF1537 M478_RS09770 PF17042 M478_RS09770 M478_RS09775 PF06530 M478_RS09775 M478_RS09780 PF00717 Peptidase S24-like M478_RS09780 PF01381 Helix-turn-helix M478_RS09785 PF06183 DinI-like family M478_RS09790 PF01278 Omptin family M478_RS09795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M478_RS09795 PF00672 HAMP domain M478_RS09795 PF02743 Cache domain M478_RS09800 PF12706 Beta-lactamase superfamily domain M478_RS09805 PF13347 MFS/sugar transport protein M478_RS09815 PF00144 Beta-lactamase M478_RS09830 PF01797 Transposase IS200 like M478_RS09835 PF00267 Gram-negative porin M478_RS09840 PF07690 Major Facilitator Superfamily M478_RS09845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M478_RS09850 PF01627 Hpt domain M478_RS09850 PF16359 M478_RS09850 M478_RS09855 PF00072 Response regulator receiver domain M478_RS09855 PF00196 Bacterial regulatory proteins, luxR family M478_RS09860 PF00072 Response regulator receiver domain M478_RS09860 PF00512 His Kinase A (phospho-acceptor) domain M478_RS09860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M478_RS09860 PF09456 RcsC Alpha-Beta-Loop (ABL) M478_RS09870 PF00521 DNA gyrase/topoisomerase IV, subunit A M478_RS09870 PF03989 DNA gyrase C-terminal domain, beta-propeller M478_RS09875 PF13489 Methyltransferase domain M478_RS09880 PF00317 Ribonucleotide reductase, all-alpha domain M478_RS09880 PF02867 Ribonucleotide reductase, barrel domain M478_RS09880 PF03477 ATP cone domain M478_RS09885 PF00268 Ribonucleotide reductase, small chain M478_RS09890 PF00111 2Fe-2S iron-sulfur cluster binding domain M478_RS09895 PF03974 Ecotin M478_RS09900 PF00994 Probable molybdopterin binding domain M478_RS09905 PF03222 Tryptophan/tyrosine permease family M478_RS09910 PF07437 M478_RS09910 M478_RS09915 PF00199 Catalase M478_RS09915 PF06628 Catalase-related immune-responsive M478_RS09920 PF00270 DEAD/DEAH box helicase M478_RS09920 PF06733 DEAD_2 M478_RS09920 PF13307 Helicase C-terminal domain M478_RS09925 PF00267 Gram-negative porin M478_RS09930 PF00892 EamA-like transporter family M478_RS09940 PF01276 Orn/Lys/Arg decarboxylase, major domain M478_RS09940 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain M478_RS09940 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain M478_RS09945 PF13520 Amino acid permease M478_RS09950 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS09955 PF00005 ABC transporter M478_RS09960 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS09965 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M478_RS09970 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M478_RS09975 PF00581 Rhodanese-like domain M478_RS09980 PF00282 Pyridoxal-dependent decarboxylase conserved domain M478_RS09985 PF13640 2OG-Fe(II) oxygenase superfamily M478_RS09990 PF00005 ABC transporter M478_RS09995 PF00005 ABC transporter M478_RS09995 PF12399 Branched-chain amino acid ATP-binding cassette transporter M478_RS10000 PF02653 M478_RS10000 M478_RS10005 PF02653 M478_RS10005 M478_RS10005 PF13646 HEAT repeats M478_RS10010 PF13433 Periplasmic binding protein domain M478_RS10015 PF07308 M478_RS10015 M478_RS10020 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS10025 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS10030 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein M478_RS10035 PF00005 ABC transporter M478_RS10040 PF04226 M478_RS10040 M478_RS10045 PF05076 Suppressor of fused protein (SUFU) M478_RS10050 PF01844 HNH endonuclease M478_RS10055 PF01928 CYTH domain M478_RS10060 PF01565 FAD binding domain M478_RS10060 PF09330 D-lactate dehydrogenase, membrane binding M478_RS10065 PF00768 D-alanyl-D-alanine carboxypeptidase M478_RS10075 PF01207 Dihydrouridine synthase (Dus) M478_RS10080 PF13349 M478_RS10080 M478_RS10085 PF01797 Transposase IS200 like M478_RS10095 PF01027 Inhibitor of apoptosis-promoting Bax1 M478_RS10100 PF02391 MoaE protein M478_RS10105 PF02597 ThiS family M478_RS10110 PF01967 MoaC family M478_RS10115 PF04055 Radical SAM superfamily M478_RS10115 PF06463 Molybdenum Cofactor Synthesis C M478_RS10115 PF13353 4Fe-4S single cluster domain M478_RS10125 PF01933 Uncharacterised protein family UPF0052 M478_RS10130 PF09905 Uncharacterized conserved protein (DUF2132) M478_RS10135 PF00271 Helicase conserved C-terminal domain M478_RS10135 PF02151 UvrB/uvrC motif M478_RS10135 PF04851 Type III restriction enzyme, res subunit M478_RS10135 PF12344 Ultra-violet resistance protein B M478_RS10140 PF00005 ABC transporter M478_RS10145 PF13500 AAA domain M478_RS10150 PF08241 Methyltransferase domain M478_RS10155 PF00155 Aminotransferase class I and II M478_RS10160 PF04055 Radical SAM superfamily M478_RS10160 PF06968 Biotin and Thiamin Synthesis associated domain M478_RS10165 PF00202 Aminotransferase class-III M478_RS10170 PF10282 Lactonase, 7-bladed beta-propeller M478_RS10175 PF08282 haloacid dehalogenase-like hydrolase M478_RS10180 PF00005 ABC transporter M478_RS10180 PF03459 TOBE domain M478_RS10185 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS10190 PF13531 Bacterial extracellular solute-binding protein M478_RS10195 PF10766 Protein of unknown function (DUF2592) M478_RS10200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M478_RS10200 PF03459 TOBE domain M478_RS10205 PF00005 ABC transporter M478_RS10215 PF02517 CAAX protease self-immunity M478_RS10220 PF16363 M478_RS10220 M478_RS10225 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain M478_RS10225 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain M478_RS10230 PF00288 GHMP kinases N terminal domain M478_RS10230 PF08544 GHMP kinases C terminal M478_RS10230 PF10509 Galactokinase galactose-binding signature M478_RS10240 PF01263 Aldose 1-epimerase M478_RS10245 PF07769 M478_RS10245 M478_RS10250 PF00300 Histidine phosphatase superfamily (branch 1) M478_RS10255 PF00793 DAHP synthetase I family M478_RS10260 PF01545 Cation efflux family M478_RS10265 PF04973 M478_RS10265 M478_RS10270 PF02445 Quinolinate synthetase A protein M478_RS10290 PF13525 Outer membrane lipoprotein M478_RS10290 PF16331 M478_RS10290 M478_RS10295 PF00691 OmpA family M478_RS10300 PF04052 TolB amino-terminal domain M478_RS10300 PF07676 WD40-like Beta Propeller Repeat M478_RS10305 PF06519 TolA C-terminal M478_RS10310 PF02472 Biopolymer transport protein ExbD/TolR M478_RS10315 PF01618 M478_RS10315 M478_RS10320 PF03061 Thioesterase superfamily M478_RS10325 PF09600 M478_RS10325 M478_RS10330 PF08173 M478_RS10330 M478_RS10335 PF02322 M478_RS10335 M478_RS10340 PF01654 M478_RS10340 M478_RS10345 PF00549 CoA-ligase M478_RS10345 PF02629 CoA binding domain M478_RS10350 PF00549 CoA-ligase M478_RS10350 PF08442 ATP-grasp domain M478_RS10355 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M478_RS10355 PF00364 Biotin-requiring enzyme M478_RS10355 PF02817 e3 binding domain M478_RS10360 PF00676 Dehydrogenase E1 component M478_RS10360 PF02779 Transketolase, pyrimidine binding domain M478_RS10360 PF16078 M478_RS10360 M478_RS10360 PF16870 M478_RS10360 M478_RS10365 PF13085 2Fe-2S iron-sulfur cluster binding domain M478_RS10365 PF13534 4Fe-4S dicluster domain M478_RS10370 PF00890 FAD binding domain M478_RS10370 PF02910 Fumarate reductase flavoprotein C-term M478_RS10380 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M478_RS10385 PF00285 Citrate synthase M478_RS10390 PF01025 GrpE M478_RS10395 PF01513 ATP-NAD kinase M478_RS10400 PF02463 RecF/RecN/SMC N terminal domain M478_RS10405 PF04355 SmpA / OmlA family M478_RS10410 PF03658 RnfH family Ubiquitin M478_RS10415 PF03364 Polyketide cyclase / dehydrase and lipid transport M478_RS10420 PF01668 SmpB protein M478_RS10430 PF01797 Transposase IS200 like M478_RS10435 PF00589 Phage integrase family M478_RS10435 PF13356 Domain of unknown function (DUF4102) M478_RS10440 PF14130 M478_RS10440 M478_RS10465 PF12834 M478_RS10465 M478_RS10465 PF12835 Integrase M478_RS10470 PF05930 Prophage CP4-57 regulatory protein (AlpA) M478_RS10475 PF10554 M478_RS10475 M478_RS10480 PF08273 Zinc-binding domain of primase-helicase M478_RS10480 PF13362 Toprim domain M478_RS10485 PF13481 AAA domain M478_RS10495 PF05973 M478_RS10495 M478_RS10505 PF00665 Integrase core domain M478_RS10505 PF02796 Helix-turn-helix domain of resolvase M478_RS10510 PF01695 IstB-like ATP binding protein M478_RS10525 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M478_RS10535 PF00929 Exonuclease M478_RS10540 PF00075 RNase H M478_RS10545 PF08241 Methyltransferase domain M478_RS10550 PF00753 Metallo-beta-lactamase superfamily M478_RS10550 PF16123 M478_RS10550 M478_RS10555 PF01464 Transglycosylase SLT domain M478_RS10555 PF01476 LysM domain M478_RS10560 PF03372 Endonuclease/Exonuclease/phosphatase family M478_RS10570 PF00248 Aldo/keto reductase family M478_RS10600 PF13242 HAD-hyrolase-like M478_RS10605 PF00005 ABC transporter M478_RS10605 PF09383 NIL domain M478_RS10610 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS10615 PF03180 NLPA lipoprotein M478_RS10620 PF16358 M478_RS10620 M478_RS10625 PF01980 Uncharacterised protein family UPF0066 M478_RS10630 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M478_RS10630 PF03129 Anticodon binding domain M478_RS10630 PF04073 Aminoacyl-tRNA editing domain M478_RS10635 PF04170 NlpE N-terminal domain M478_RS10635 PF17185 M478_RS10635 M478_RS10640 PF00472 RF-1 domain M478_RS10645 PF07152 YaeQ protein M478_RS10650 PF06786 M478_RS10650 M478_RS10655 PF07073 Modulator of Rho-dependent transcription termination (ROF) M478_RS10660 PF00034 Cytochrome c M478_RS10665 PF01171 PP-loop family M478_RS10665 PF09179 TilS substrate binding domain M478_RS10665 PF11734 TilS substrate C-terminal domain M478_RS10670 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M478_RS10675 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit M478_RS10680 PF01336 OB-fold nucleic acid binding domain M478_RS10680 PF02811 PHP domain M478_RS10680 PF07733 Bacterial DNA polymerase III alpha subunit M478_RS10680 PF14579 Helix-hairpin-helix motif M478_RS10685 PF01351 Ribonuclease HII M478_RS10690 PF02684 M478_RS10690 M478_RS10695 PF00132 Bacterial transferase hexapeptide (six repeats) M478_RS10695 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 M478_RS10700 PF07977 FabA-like domain M478_RS10705 PF00132 Bacterial transferase hexapeptide (six repeats) M478_RS10705 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD M478_RS10710 PF03938 Outer membrane protein (OmpH-like) M478_RS10715 PF01103 Surface antigen M478_RS10715 PF07244 Surface antigen variable number repeat M478_RS10720 PF00595 PDZ domain (Also known as DHR or GLGF) M478_RS10720 PF02163 Peptidase family M50 M478_RS10725 PF01148 Cytidylyltransferase family M478_RS10730 PF01255 Putative undecaprenyl diphosphate synthase M478_RS10735 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase M478_RS10735 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal M478_RS10735 PF13288 DXP reductoisomerase C-terminal domain M478_RS10740 PF01765 Ribosome recycling factor M478_RS10745 PF00696 Amino acid kinase family M478_RS10750 PF00889 Elongation factor TS M478_RS10755 PF00318 Ribosomal protein S2 M478_RS10760 PF00557 Metallopeptidase family M24 M478_RS10765 PF01842 ACT domain M478_RS10765 PF01909 Nucleotidyltransferase domain M478_RS10765 PF01966 HD domain M478_RS10765 PF08335 GlnD PII-uridylyltransferase M478_RS10770 PF00132 Bacterial transferase hexapeptide (six repeats) M478_RS10770 PF14602 Hexapeptide repeat of succinyl-transferase M478_RS10770 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal M478_RS10775 PF11944 M478_RS10775 M478_RS10780 PF00258 Flavodoxin M478_RS10785 PF00849 RNA pseudouridylate synthase M478_RS10790 PF04287 tRNA pseudouridine synthase C M478_RS10795 PF01797 Transposase IS200 like M478_RS10800 PF07348 Syd protein (SUKH-2) M478_RS10805 PF14489 QueF-like protein M478_RS10805 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term M478_RS10810 PF03641 Possible lysine decarboxylase M478_RS10810 PF11892 Domain of unknown function (DUF3412) M478_RS10810 PF14793 Domain of unknown function (DUF4478) M478_RS10820 PF01695 IstB-like ATP binding protein M478_RS10825 PF01367 5'-3' exonuclease, C-terminal SAM fold M478_RS10825 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M478_RS10830 PF01728 FtsJ-like methyltransferase M478_RS10835 PF04241 M478_RS10835 M478_RS10840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M478_RS10840 PF03466 LysR substrate binding domain M478_RS10845 PF00266 Aminotransferase class-V M478_RS10850 PF02657 Fe-S metabolism associated domain M478_RS10855 PF00899 ThiF family M478_RS10860 PF03562 MltA specific insert domain M478_RS10860 PF06725 3D domain M478_RS10875 PF01520 N-acetylmuramoyl-L-alanine amidase M478_RS10875 PF11741 AMIN domain M478_RS10880 PF00583 Acetyltransferase (GNAT) family M478_RS10880 PF00696 Amino acid kinase family M478_RS10885 PF13538 UvrD-like helicase C-terminal domain M478_RS10885 PF13604 AAA domain M478_RS10890 PF00580 UvrD/REP helicase N-terminal domain M478_RS10890 PF13361 UvrD-like helicase C-terminal domain M478_RS10895 PF00675 Insulinase (Peptidase family M16) M478_RS10895 PF05193 Peptidase M16 inactive domain M478_RS10895 PF16187 M478_RS10895 M478_RS10900 PF04257 Exodeoxyribonuclease V, gamma subunit M478_RS10905 PF12528 M478_RS10905 M478_RS10910 PF10713 M478_RS10910 M478_RS10930 PF00303 Thymidylate synthase M478_RS10935 PF01790 M478_RS10935 M478_RS10940 PF00391 PEP-utilising enzyme, mobile domain M478_RS10940 PF01590 GAF domain M478_RS10940 PF02896 PEP-utilising enzyme, TIM barrel domain M478_RS10940 PF05524 PEP-utilising enzyme, N-terminal M478_RS10945 PF00293 NUDIX domain M478_RS10960 PF02976 DNA mismatch repair enzyme MutH M478_RS10965 PF00248 Aldo/keto reductase family M478_RS10980 PF07690 Major Facilitator Superfamily M478_RS10985 PF00501 AMP-binding enzyme M478_RS10985 PF01553 Acyltransferase M478_RS10990 PF00384 Molybdopterin oxidoreductase M478_RS10990 PF01568 Molydopterin dinucleotide binding domain M478_RS10995 PF00356 Bacterial regulatory proteins, lacI family M478_RS10995 PF13377 Periplasmic binding protein-like domain M478_RS11000 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain M478_RS11000 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain M478_RS11005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M478_RS11005 PF03466 LysR substrate binding domain M478_RS11010 PF07690 Major Facilitator Superfamily M478_RS11015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M478_RS11015 PF03466 LysR substrate binding domain M478_RS11020 PF00753 Metallo-beta-lactamase superfamily M478_RS11025 PF01323 DSBA-like thioredoxin domain M478_RS11030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M478_RS11030 PF00672 HAMP domain M478_RS11030 PF02203 Tar ligand binding domain homologue M478_RS11040 PF00486 Transcriptional regulatory protein, C terminal M478_RS11045 PF09691 Bacterial chaperone lipoprotein (PulS_OutS) M478_RS11050 PF01478 Type IV leader peptidase family M478_RS11050 PF06750 M478_RS11050 M478_RS11060 PF05134 Type II secretion system (T2SS), protein L M478_RS11060 PF12693 GspL periplasmic domain M478_RS11065 PF03934 Type II secretion system (T2SS), protein K M478_RS11070 PF11612 Type II secretion system (T2SS), protein J M478_RS11070 PF13633 Prokaryotic N-terminal methylation site M478_RS11075 PF02501 Type II secretion system (T2SS), protein I M478_RS11085 PF08334 Type II secretion system (T2SS), protein G M478_RS11085 PF13544 M478_RS11085 M478_RS11090 PF00482 Type II secretion system (T2SS), protein F M478_RS11100 PF00437 Type II/IV secretion system protein M478_RS11105 PF00263 M478_RS11105 M478_RS11105 PF03958 Bacterial type II/III secretion system short domain M478_RS11110 PF11356 Type IV pilus biogenesis M478_RS11120 PF00484 Carbonic anhydrase M478_RS11135 PF16946 M478_RS11135 M478_RS11140 PF03797 Autotransporter beta-domain M478_RS11145 PF02278 Polysaccharide lyase family 8, super-sandwich domain M478_RS11145 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain M478_RS11145 PF09092 Lyase, N terminal M478_RS11145 PF09093 Lyase, catalytic M478_RS11150 PF01695 IstB-like ATP binding protein M478_RS11155 PF00665 Integrase core domain M478_RS11155 PF02796 Helix-turn-helix domain of resolvase M478_RS11160 PF00109 Beta-ketoacyl synthase, N-terminal domain M478_RS11160 PF00501 AMP-binding enzyme M478_RS11160 PF00550 Phosphopantetheine attachment site M478_RS11160 PF02801 Beta-ketoacyl synthase, C-terminal domain M478_RS11165 PF00593 TonB dependent receptor M478_RS11165 PF07715 TonB-dependent Receptor Plug Domain M478_RS11170 PF01546 Peptidase family M20/M25/M40 M478_RS11170 PF07687 Peptidase dimerisation domain M478_RS11175 PF03806 M478_RS11175 M478_RS11180 PF12468 Type III secretion system leucine rich repeat protein M478_RS11180 PF14496 C-terminal novel E3 ligase, LRR-interacting M478_RS11185 PF12468 Type III secretion system leucine rich repeat protein M478_RS11190 PF12468 Type III secretion system leucine rich repeat protein M478_RS11190 PF14496 C-terminal novel E3 ligase, LRR-interacting M478_RS11195 PF13018 M478_RS11195 M478_RS11205 PF07906 M478_RS11205 M478_RS11210 PF00873 AcrB/AcrD/AcrF family M478_RS11215 PF16576 M478_RS11215 M478_RS11225 PF00563 EAL domain M478_RS11225 PF00989 PAS fold M478_RS11225 PF00990 GGDEF domain M478_RS11225 PF05228 M478_RS11225 M478_RS11230 PF00665 Integrase core domain M478_RS11230 PF13276 M478_RS11230 M478_RS11235 PF13518 Helix-turn-helix domain M478_RS11240 PF13347 MFS/sugar transport protein M478_RS11245 PF00593 TonB dependent receptor M478_RS11245 PF07715 TonB-dependent Receptor Plug Domain M478_RS11250 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) M478_RS11255 PF04183 IucA / IucC family M478_RS11255 PF06276 Ferric iron reductase FhuF-like transporter M478_RS11260 PF13523 Acetyltransferase (GNAT) domain M478_RS11265 PF04183 IucA / IucC family M478_RS11265 PF06276 Ferric iron reductase FhuF-like transporter M478_RS11270 PF04183 IucA / IucC family M478_RS11275 PF07690 Major Facilitator Superfamily M478_RS11280 PF00775 Dioxygenase M478_RS11285 PF10503 Esterase PHB depolymerase M478_RS11290 PF00196 Bacterial regulatory proteins, luxR family M478_RS11290 PF03472 Autoinducer binding domain M478_RS11295 PF00765 Autoinducer synthetase M478_RS11300 PF02517 CAAX protease self-immunity M478_RS11310 PF03811 M478_RS11310 M478_RS11310 PF12759 M478_RS11310 M478_RS11325 PF05591 M478_RS11325 M478_RS11330 PF05943 M478_RS11330 M478_RS11335 PF05936 M478_RS11335 M478_RS11340 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) M478_RS11345 PF00691 OmpA family M478_RS11350 PF05638 Protein of unknown function (DUF796) M478_RS11355 PF00004 ATPase family associated with various cellular activities (AAA) M478_RS11355 PF07724 AAA domain (Cdc48 subfamily) M478_RS11355 PF10431 C-terminal, D2-small domain, of ClpB protein M478_RS11360 PF05954 Phage late control gene D protein (GPD) M478_RS11360 PF10106 M478_RS11360 M478_RS11360 PF13296 M478_RS11360 M478_RS11380 PF03811 M478_RS11380 M478_RS11380 PF12759 M478_RS11380 M478_RS11395 PF01551 Peptidase family M23 M478_RS11405 PF12759 M478_RS11405 M478_RS11410 PF03400 M478_RS11410 M478_RS11415 PF10106 M478_RS11415 M478_RS11420 PF00589 Phage integrase family M478_RS11430 PF01276 Orn/Lys/Arg decarboxylase, major domain M478_RS11430 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain M478_RS11430 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain M478_RS11435 PF13407 Periplasmic binding protein domain M478_RS11440 PF00005 ABC transporter M478_RS11445 PF02653 M478_RS11445 M478_RS11450 PF00593 TonB dependent receptor M478_RS11450 PF07715 TonB-dependent Receptor Plug Domain M478_RS11455 PF01497 Periplasmic binding protein M478_RS11460 PF01464 Transglycosylase SLT domain M478_RS11460 PF11873 Domain of unknown function (DUF3393) M478_RS11465 PF04362 Bacterial Fe(2+) trafficking M478_RS11470 PF00633 Helix-hairpin-helix motif M478_RS11470 PF00730 HhH-GPD superfamily base excision DNA repair protein M478_RS11470 PF10576 Iron-sulfur binding domain of endonuclease III M478_RS11470 PF14815 NUDIX domain M478_RS11475 PF02390 Putative methyltransferase M478_RS11480 PF04320 M478_RS11480 M478_RS11485 PF04960 Glutaminase M478_RS11490 PF11101 M478_RS11490 M478_RS11495 PF11101 M478_RS11495 M478_RS11500 PF11713 Peptidase C80 family M478_RS11505 PF04055 Radical SAM superfamily M478_RS11505 PF06969 HemN C-terminal domain M478_RS11510 PF01725 Ham1 family M478_RS11515 PF02594 Uncharacterised ACR, YggU family COG1872 M478_RS11520 PF02325 M478_RS11520 M478_RS11525 PF03807 NADP oxidoreductase coenzyme F420-dependent M478_RS11525 PF14748 Pyrroline-5-carboxylate reductase dimerisation M478_RS11530 PF01168 Alanine racemase, N-terminal domain M478_RS11535 PF00437 Type II/IV secretion system protein M478_RS11540 PF04371 Porphyromonas-type peptidyl-arginine deiminase M478_RS11545 PF00795 Carbon-nitrogen hydrolase M478_RS11550 PF03652 Uncharacterised protein family (UPF0081) M478_RS11555 PF02622 Uncharacterized ACR, COG1678 M478_RS11560 PF02951 Prokaryotic glutathione synthetase, N-terminal domain M478_RS11560 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain M478_RS11565 PF04452 RNA methyltransferase M478_RS11570 PF04231 Endonuclease I M478_RS11575 PF10263 M478_RS11575 M478_RS11580 PF00438 S-adenosylmethionine synthetase, N-terminal domain M478_RS11580 PF02772 S-adenosylmethionine synthetase, central domain M478_RS11580 PF02773 S-adenosylmethionine synthetase, C-terminal domain M478_RS11585 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain M478_RS11585 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain M478_RS11590 PF00355 Rieske [2Fe-2S] domain M478_RS11595 PF01435 Peptidase family M48 M478_RS11600 PF00456 Transketolase, thiamine diphosphate binding domain M478_RS11600 PF02779 Transketolase, pyrimidine binding domain M478_RS11600 PF02780 Transketolase, C-terminal domain M478_RS11610 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M478_RS11610 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M478_RS11615 PF00162 Phosphoglycerate kinase M478_RS11620 PF01116 Fructose-bisphosphate aldolase class-II M478_RS11630 PF00924 Mechanosensitive ion channel M478_RS11630 PF05552 Conserved TM helix M478_RS11635 PF01810 M478_RS11635 M478_RS11640 PF04402 Protein of unknown function (DUF541) M478_RS11645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M478_RS11645 PF03466 LysR substrate binding domain M478_RS11650 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) M478_RS11655 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M478_RS11655 PF01842 ACT domain M478_RS11655 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M478_RS11660 PF01812 5-formyltetrahydrofolate cyclo-ligase family M478_RS11665 PF05164 Cell division protein ZapA M478_RS11670 PF03695 Uncharacterised protein family (UPF0149) M478_RS11675 PF00557 Metallopeptidase family M24 M478_RS11675 PF05195 Aminopeptidase P, N-terminal domain M478_RS11680 PF01494 FAD binding domain M478_RS11685 PF01494 FAD binding domain M478_RS11690 PF01571 Aminomethyltransferase folate-binding domain M478_RS11690 PF08669 Glycine cleavage T-protein C-terminal barrel domain M478_RS11695 PF01597 Glycine cleavage H-protein M478_RS11700 PF02347 Glycine cleavage system P-protein M478_RS11705 PF13924 M478_RS11705 M478_RS11715 PF03895 YadA-like C-terminal region M478_RS11715 PF05658 Head domain of trimeric autotransporter adhesin M478_RS11715 PF05662 Coiled stalk of trimeric autotransporter adhesin M478_RS11725 PF03006 M478_RS11725 M478_RS11730 PF09933 M478_RS11730 M478_RS11735 PF00665 Integrase core domain M478_RS11735 PF02796 Helix-turn-helix domain of resolvase M478_RS11745 PF01695 IstB-like ATP binding protein M478_RS11750 PF09933 M478_RS11750 M478_RS11755 PF01571 Aminomethyltransferase folate-binding domain M478_RS11760 PF03937 Flavinator of succinate dehydrogenase M478_RS11765 PF07254 M478_RS11765 M478_RS11770 PF00072 Response regulator receiver domain M478_RS11770 PF00486 Transcriptional regulatory protein, C terminal M478_RS11775 PF00512 His Kinase A (phospho-acceptor) domain M478_RS11775 PF00672 HAMP domain M478_RS11775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M478_RS11775 PF14827 Sensory domain of two-component sensor kinase M478_RS11780 PF06123 M478_RS11780 M478_RS11785 PF00258 Flavodoxin M478_RS11790 PF00589 Phage integrase family M478_RS11790 PF02899 Phage integrase, N-terminal SAM-like domain M478_RS11795 PF10411 Disulfide bond isomerase protein N-terminus M478_RS11795 PF13098 Thioredoxin-like domain M478_RS11800 PF01368 DHH family M478_RS11800 PF02272 DHHA1 domain M478_RS11805 PF00472 RF-1 domain M478_RS11805 PF03462 PCRF domain M478_RS11810 PF00152 tRNA synthetases class II (D, K and N) M478_RS11810 PF01336 OB-fold nucleic acid binding domain M478_RS11820 PF00589 Phage integrase family M478_RS11820 PF13356 Domain of unknown function (DUF4102) M478_RS11835 PF05016 Plasmid stabilisation system protein M478_RS11840 PF01381 Helix-turn-helix M478_RS11845 PF15723 M478_RS11845 M478_RS11850 PF15731 M478_RS11850 M478_RS11855 PF03288 Poxvirus D5 protein-like M478_RS11855 PF08273 Zinc-binding domain of primase-helicase M478_RS11855 PF08706 M478_RS11855 M478_RS11855 PF13362 Toprim domain M478_RS11860 PF05973 M478_RS11860 M478_RS11870 PF05930 Prophage CP4-57 regulatory protein (AlpA) M478_RS11890 PF02661 Fic/DOC family M478_RS11895 PF05488 PAAR motif M478_RS11895 PF06958 S-type Pyocin M478_RS11900 PF14206 M478_RS11900 M478_RS11910 PF09204 Bacterial self-protective colicin-like immunity M478_RS11920 PF11340 M478_RS11920 M478_RS11935 PF05488 PAAR motif M478_RS11940 PF12977 Domain of Unknown Function with PDB structure (DUF3861) M478_RS11945 PF03551 Transcriptional regulator PadR-like family M478_RS11950 PF05708 Orthopoxvirus protein of unknown function (DUF830) M478_RS11960 PF13407 Periplasmic binding protein domain M478_RS11965 PF02653 M478_RS11965 M478_RS11970 PF00005 ABC transporter M478_RS11975 PF00005 ABC transporter M478_RS11975 PF08402 TOBE domain M478_RS11980 PF13416 Bacterial extracellular solute-binding protein M478_RS11985 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS11990 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS11995 PF07745 Glycosyl hydrolase family 53 M478_RS12000 PF02449 Beta-galactosidase M478_RS12000 PF08532 Beta-galactosidase trimerisation domain M478_RS12000 PF08533 Beta-galactosidase C-terminal domain M478_RS12005 PF00367 phosphotransferase system, EIIB M478_RS12010 PF02264 LamB porin M478_RS12015 PF00356 Bacterial regulatory proteins, lacI family M478_RS12015 PF13377 Periplasmic binding protein-like domain M478_RS12020 PF01055 Glycosyl hydrolases family 31 M478_RS12020 PF13802 Galactose mutarotase-like M478_RS12020 PF17137 M478_RS12020 M478_RS12025 PF07690 Major Facilitator Superfamily M478_RS12030 PF00356 Bacterial regulatory proteins, lacI family M478_RS12030 PF13377 Periplasmic binding protein-like domain M478_RS12040 PF01965 DJ-1/PfpI family M478_RS12045 PF01116 Fructose-bisphosphate aldolase class-II M478_RS12050 PF10022 M478_RS12050 M478_RS12055 PF00884 Sulfatase M478_RS12060 PF04055 Radical SAM superfamily M478_RS12060 PF13186 Iron-sulfur cluster-binding domain M478_RS12065 PF07470 Glycosyl Hydrolase Family 88 M478_RS12070 PF13561 Enoyl-(Acyl carrier protein) reductase M478_RS12075 PF01979 Amidohydrolase family M478_RS12080 PF03610 PTS system fructose IIA component M478_RS12085 PF03613 M478_RS12085 M478_RS12090 PF03609 M478_RS12090 M478_RS12095 PF03830 PTS system sorbose subfamily IIB component M478_RS12100 PF01380 SIS domain M478_RS12105 PF08013 Tagatose 6 phosphate kinase M478_RS12110 PF00455 M478_RS12110 M478_RS12110 PF08220 DeoR-like helix-turn-helix domain M478_RS12115 PF00884 Sulfatase M478_RS12120 PF01797 Transposase IS200 like M478_RS12135 PF01695 IstB-like ATP binding protein M478_RS12140 PF00501 AMP-binding enzyme M478_RS12140 PF00550 Phosphopantetheine attachment site M478_RS12140 PF00668 Condensation domain M478_RS12140 PF08415 M478_RS12140 M478_RS12145 PF00501 AMP-binding enzyme M478_RS12145 PF00550 Phosphopantetheine attachment site M478_RS12150 PF00501 AMP-binding enzyme M478_RS12150 PF00550 Phosphopantetheine attachment site M478_RS12150 PF00668 Condensation domain M478_RS12150 PF00975 Thioesterase domain M478_RS12150 PF08242 Methyltransferase domain M478_RS12150 PF08415 M478_RS12150 M478_RS12160 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M478_RS12165 PF00975 Thioesterase domain M478_RS12170 PF07690 Major Facilitator Superfamily M478_RS12175 PF00005 ABC transporter M478_RS12175 PF00664 ABC transporter transmembrane region M478_RS12180 PF00005 ABC transporter M478_RS12180 PF00664 ABC transporter transmembrane region M478_RS12195 PF02447 M478_RS12195 M478_RS12215 PF03797 Autotransporter beta-domain M478_RS12220 PF03797 Autotransporter beta-domain M478_RS12225 PF05954 Phage late control gene D protein (GPD) M478_RS12225 PF06715 Gp5 C-terminal repeat (3 copies) M478_RS12235 PF03527 M478_RS12235 M478_RS12235 PF05593 M478_RS12235 M478_RS12250 PF00939 Sodium:sulfate symporter transmembrane region M478_RS12255 PF00356 Bacterial regulatory proteins, lacI family M478_RS12255 PF13377 Periplasmic binding protein-like domain M478_RS12260 PF00150 Cellulase (glycosyl hydrolase family 5) M478_RS12265 PF00665 Integrase core domain M478_RS12265 PF13276 M478_RS12265 M478_RS12270 PF13518 Helix-turn-helix domain M478_RS12275 PF00669 Bacterial flagellin N-terminal helical region M478_RS12275 PF00700 Bacterial flagellin C-terminal helical region M478_RS12280 PF00486 Transcriptional regulatory protein, C terminal M478_RS12295 PF00669 Bacterial flagellin N-terminal helical region M478_RS12300 PF00460 Flagella basal body rod protein M478_RS12300 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M478_RS12305 PF10135 M478_RS12305 M478_RS12310 PF02119 M478_RS12310 M478_RS12315 PF02107 M478_RS12315 M478_RS12320 PF00460 Flagella basal body rod protein M478_RS12320 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M478_RS12325 PF00460 Flagella basal body rod protein M478_RS12325 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M478_RS12330 PF00460 Flagella basal body rod protein M478_RS12330 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M478_RS12330 PF07559 Flagellar basal body protein FlaE M478_RS12335 PF03963 M478_RS12335 M478_RS12335 PF13860 FlgD Ig-like domain M478_RS12335 PF13861 FlgD Tudor-like domain M478_RS12340 PF00460 Flagella basal body rod protein M478_RS12340 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M478_RS12345 PF00460 Flagella basal body rod protein M478_RS12350 PF13144 SAF-like M478_RS12355 PF04316 Anti-sigma-28 factor, FlgM M478_RS12360 PF05130 FlgN protein M478_RS12365 PF02050 Flagellar FliJ protein M478_RS12370 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M478_RS12375 PF02108 M478_RS12375 M478_RS12375 PF09811 M478_RS12375 M478_RS12380 PF01706 FliG C-terminal domain M478_RS12380 PF14841 FliG middle domain M478_RS12380 PF14842 FliG N-terminal domain M478_RS12385 PF01514 Secretory protein of YscJ/FliF family M478_RS12385 PF08345 M478_RS12385 M478_RS12390 PF02049 M478_RS12390 M478_RS12395 PF00158 Sigma-54 interaction domain M478_RS12395 PF02954 Bacterial regulatory protein, Fis family M478_RS12400 PF01052 Surface presentation of antigens (SPOA) M478_RS12405 PF01052 Surface presentation of antigens (SPOA) M478_RS12410 PF00813 M478_RS12410 M478_RS12415 PF01313 M478_RS12415 M478_RS12420 PF01311 M478_RS12420 M478_RS12425 PF01312 FlhB HrpN YscU SpaS Family M478_RS12435 PF11153 M478_RS12435 M478_RS12445 PF01497 Periplasmic binding protein M478_RS12450 PF00419 Fimbrial protein M478_RS12455 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M478_RS12455 PF02753 Pili assembly chaperone PapD, C-terminal domain M478_RS12460 PF00577 Outer membrane usher protein M478_RS12460 PF13953 PapC C-terminal domain M478_RS12460 PF13954 PapC N-terminal domain M478_RS12465 PF01797 Transposase IS200 like M478_RS12470 PF01478 Type IV leader peptidase family M478_RS12480 PF13629 M478_RS12480 M478_RS12485 PF00263 M478_RS12485 M478_RS12500 PF00437 Type II/IV secretion system protein M478_RS12505 PF00482 Type II secretion system (T2SS), protein F M478_RS12510 PF00482 Type II secretion system (T2SS), protein F M478_RS12520 PF07811 M478_RS12520 M478_RS12525 PF16964 M478_RS12525 M478_RS12535 PF02472 Biopolymer transport protein ExbD/TolR M478_RS12540 PF01618 M478_RS12540 M478_RS12545 PF01053 Cys/Met metabolism PLP-dependent enzyme M478_RS12550 PF09335 M478_RS12550 M478_RS12555 PF06719 M478_RS12555 M478_RS12555 PF12833 Helix-turn-helix domain M478_RS12560 PF00465 Iron-containing alcohol dehydrogenase M478_RS12570 PF00248 Aldo/keto reductase family M478_RS12580 PF07731 Multicopper oxidase M478_RS12580 PF07732 Multicopper oxidase M478_RS12585 PF01553 Acyltransferase M478_RS12590 PF00521 DNA gyrase/topoisomerase IV, subunit A M478_RS12590 PF03989 DNA gyrase C-terminal domain, beta-propeller M478_RS12600 PF02525 Flavodoxin-like fold M478_RS12605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M478_RS12605 PF03466 LysR substrate binding domain M478_RS12610 PF00204 DNA gyrase B M478_RS12610 PF00986 DNA gyrase B subunit, carboxyl terminus M478_RS12610 PF01751 Toprim domain M478_RS12610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M478_RS12615 PF05728 Uncharacterised protein family (UPF0227) M478_RS12620 PF00149 Calcineurin-like phosphoesterase M478_RS12625 PF06853 M478_RS12625 M478_RS12630 PF00293 NUDIX domain M478_RS12635 PF02321 Outer membrane efflux protein M478_RS12645 PF06693 M478_RS12645 M478_RS12650 PF03738 Glutathionylspermidine synthase preATP-grasp M478_RS12655 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase M478_RS12660 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M478_RS12670 PF04380 M478_RS12670 M478_RS12675 PF13520 Amino acid permease M478_RS12680 PF00294 pfkB family carbohydrate kinase M478_RS12680 PF01467 Cytidylyltransferase M478_RS12685 PF03710 Glutamate-ammonia ligase adenylyltransferase M478_RS12685 PF08335 GlnD PII-uridylyltransferase M478_RS12690 PF01928 CYTH domain M478_RS12695 PF08239 Bacterial SH3 domain M478_RS12700 PF01743 Poly A polymerase head domain M478_RS12700 PF01966 HD domain M478_RS12700 PF12627 Probable RNA and SrmB- binding site of polymerase A M478_RS12705 PF02673 M478_RS12705 M478_RS12710 PF02152 Dihydroneopterin aldolase M478_RS12715 PF02660 M478_RS12715 M478_RS12720 PF00814 Glycoprotease family M478_RS12725 PF01165 Ribosomal protein S21 M478_RS12730 PF01807 CHC2 zinc finger M478_RS12730 PF08275 DNA primase catalytic core, N-terminal domain M478_RS12730 PF08278 DNA primase DnaG DnaB-binding M478_RS12730 PF10410 DnaB-helicase binding domain of primase M478_RS12730 PF13155 Toprim-like M478_RS12735 PF00140 Sigma-70 factor, region 1 M478_RS12735 PF03979 Sigma-70 factor, region 1 M478_RS12735 PF04539 Sigma-70 region 3 M478_RS12735 PF04542 Sigma-70 region 2 M478_RS12735 PF04545 Sigma-70, region 4 M478_RS12735 PF04546 Sigma-70, non-essential region M478_RS12750 PF03592 Terminase small subunit M478_RS12785 PF02661 Fic/DOC family M478_RS12795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M478_RS12795 PF03466 LysR substrate binding domain M478_RS12805 PF08803 Putative mono-oxygenase ydhR M478_RS12810 PF01042 Endoribonuclease L-PSP M478_RS12815 PF01042 Endoribonuclease L-PSP M478_RS12820 PF08348 M478_RS12820 M478_RS12820 PF13309 M478_RS12820 M478_RS12825 PF10604 Polyketide cyclase / dehydrase and lipid transport M478_RS12835 PF00155 Aminotransferase class I and II M478_RS12850 PF17090 M478_RS12850 M478_RS12855 PF13437 HlyD family secretion protein M478_RS12855 PF13533 Biotin-lipoyl like M478_RS12860 PF04632 M478_RS12860 M478_RS12865 PF02321 Outer membrane efflux protein M478_RS12870 PF00933 Glycosyl hydrolase family 3 N terminal domain M478_RS12870 PF01915 Glycosyl hydrolase family 3 C-terminal domain M478_RS12870 PF14310 Fibronectin type III-like domain M478_RS12880 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS12885 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS12890 PF01547 Bacterial extracellular solute-binding protein M478_RS12895 PF00356 Bacterial regulatory proteins, lacI family M478_RS12895 PF13377 Periplasmic binding protein-like domain M478_RS12905 PF00005 ABC transporter M478_RS12905 PF08402 TOBE domain M478_RS12910 PF10091 Putative glucoamylase M478_RS12920 PF03797 Autotransporter beta-domain M478_RS12930 PF15599 M478_RS12930 M478_RS12940 PF13332 M478_RS12940 M478_RS12950 PF04829 M478_RS12950 M478_RS12950 PF05860 haemagglutination activity domain M478_RS12950 PF13018 M478_RS12950 M478_RS12950 PF13332 M478_RS12950 M478_RS12955 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB M478_RS12955 PF08479 POTRA domain, ShlB-type M478_RS12960 PF00092 von Willebrand factor type A domain M478_RS12965 PF02342 TerD domain M478_RS12970 PF00092 von Willebrand factor type A domain M478_RS12975 PF00092 von Willebrand factor type A domain M478_RS12975 PF15616 M478_RS12975 M478_RS12980 PF13672 Protein phosphatase 2C M478_RS12985 PF00069 Protein kinase domain M478_RS12995 PF03729 M478_RS12995 M478_RS13000 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M478_RS13000 PF07992 Pyridine nucleotide-disulphide oxidoreductase M478_RS13005 PF05175 Methyltransferase small domain M478_RS13010 PF03212 Pertactin M478_RS13010 PF03797 Autotransporter beta-domain M478_RS13015 PF01863 Protein of unknown function DUF45 M478_RS13020 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M478_RS13025 PF00375 Sodium:dicarboxylate symporter family M478_RS13035 PF01797 Transposase IS200 like M478_RS13040 PF10688 M478_RS13040 M478_RS13045 PF04295 M478_RS13045 M478_RS13045 PF08666 SAF domain M478_RS13050 PF01232 Mannitol dehydrogenase Rossmann domain M478_RS13050 PF08125 Mannitol dehydrogenase C-terminal domain M478_RS13055 PF02614 Glucuronate isomerase M478_RS13065 PF07690 Major Facilitator Superfamily M478_RS13070 PF00392 Bacterial regulatory proteins, gntR family M478_RS13070 PF07729 FCD domain M478_RS13080 PF09335 M478_RS13080 M478_RS13085 PF13721 SecD export protein N-terminal TM region M478_RS13090 PF06476 M478_RS13090 M478_RS13100 PF05957 M478_RS13100 M478_RS13105 PF07332 M478_RS13105 M478_RS13110 PF13997 M478_RS13110 M478_RS13115 PF07681 M478_RS13115 M478_RS13125 PF00665 Integrase core domain M478_RS13125 PF02796 Helix-turn-helix domain of resolvase M478_RS13130 PF01695 IstB-like ATP binding protein M478_RS13135 PF00293 NUDIX domain M478_RS13140 PF01043 SecA preprotein cross-linking domain M478_RS13140 PF02810 SEC-C motif M478_RS13140 PF07516 SecA Wing and Scaffold domain M478_RS13140 PF07517 SecA DEAD-like domain M478_RS13145 PF06558 M478_RS13145 M478_RS13150 PF05258 M478_RS13150 M478_RS13155 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase M478_RS13160 PF00091 Tubulin/FtsZ family, GTPase domain M478_RS13160 PF12327 FtsZ family, C-terminal domain M478_RS13165 PF02491 SHS2 domain inserted in FTSA M478_RS13165 PF14450 Cell division protein FtsA M478_RS13170 PF03799 Cell division protein FtsQ M478_RS13170 PF08478 POTRA domain, FtsQ-type M478_RS13175 PF01820 D-ala D-ala ligase N-terminus M478_RS13175 PF07478 D-ala D-ala ligase C-terminus M478_RS13180 PF01225 Mur ligase family, catalytic domain M478_RS13180 PF02875 Mur ligase family, glutamate ligase domain M478_RS13180 PF08245 Mur ligase middle domain M478_RS13185 PF03033 Glycosyltransferase family 28 N-terminal domain M478_RS13185 PF04101 Glycosyltransferase family 28 C-terminal domain M478_RS13190 PF01098 M478_RS13190 M478_RS13195 PF02875 Mur ligase family, glutamate ligase domain M478_RS13195 PF08245 Mur ligase middle domain M478_RS13200 PF00953 Glycosyl transferase family 4 M478_RS13200 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 M478_RS13205 PF01225 Mur ligase family, catalytic domain M478_RS13205 PF02875 Mur ligase family, glutamate ligase domain M478_RS13205 PF08245 Mur ligase middle domain M478_RS13210 PF01225 Mur ligase family, catalytic domain M478_RS13210 PF02875 Mur ligase family, glutamate ligase domain M478_RS13210 PF08245 Mur ligase middle domain M478_RS13215 PF00905 Penicillin binding protein transpeptidase domain M478_RS13215 PF03717 Penicillin-binding Protein dimerisation domain M478_RS13220 PF04999 M478_RS13220 M478_RS13225 PF01795 MraW methylase family M478_RS13230 PF02381 MraZ protein M478_RS13235 PF06610 M478_RS13235 M478_RS13240 PF00356 Bacterial regulatory proteins, lacI family M478_RS13240 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family M478_RS13250 PF01797 Transposase IS200 like M478_RS13255 PF01842 ACT domain M478_RS13255 PF10369 Small subunit of acetolactate synthase M478_RS13260 PF00205 Thiamine pyrophosphate enzyme, central domain M478_RS13260 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M478_RS13260 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M478_RS13270 PF00501 AMP-binding enzyme M478_RS13280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M478_RS13280 PF03466 LysR substrate binding domain M478_RS13290 PF01797 Transposase IS200 like M478_RS13300 PF01695 IstB-like ATP binding protein M478_RS13305 PF01113 Dihydrodipicolinate reductase, N-terminus M478_RS13305 PF05173 Dihydrodipicolinate reductase, C-terminus M478_RS13310 PF00117 Glutamine amidotransferase class-I M478_RS13310 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain M478_RS13315 PF02142 MGS-like domain M478_RS13315 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M478_RS13315 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain M478_RS13320 PF01810 M478_RS13320 M478_RS13325 PF06738 M478_RS13325 M478_RS13330 PF12821 M478_RS13330 M478_RS13335 PF00186 Dihydrofolate reductase M478_RS13340 PF01797 Transposase IS200 like M478_RS13345 PF12582 M478_RS13345 M478_RS13350 PF12582 M478_RS13350 M478_RS13355 PF00149 Calcineurin-like phosphoesterase M478_RS13360 PF04379 Protein of unknown function (DUF525) M478_RS13365 PF00398 Ribosomal RNA adenine dimethylase M478_RS13370 PF04166 Pyridoxal phosphate biosynthetic protein PdxA M478_RS13375 PF00639 PPIC-type PPIASE domain M478_RS13375 PF09312 SurA N-terminal domain M478_RS13380 PF03968 OstA-like protein M478_RS13380 PF04453 Organic solvent tolerance protein M478_RS13385 PF00226 DnaJ domain M478_RS13385 PF05099 Tellurite resistance protein TerB M478_RS13390 PF00849 RNA pseudouridylate synthase M478_RS13395 PF10074 M478_RS13395 M478_RS13400 PF06812 M478_RS13400 M478_RS13405 PF05591 M478_RS13405 M478_RS13410 PF05943 M478_RS13410 M478_RS13415 PF05638 Protein of unknown function (DUF796) M478_RS13420 PF04965 Gene 25-like lysozyme M478_RS13425 PF05947 M478_RS13425 M478_RS13430 PF06996 M478_RS13430 M478_RS13435 PF00004 ATPase family associated with various cellular activities (AAA) M478_RS13435 PF02861 Clp amino terminal domain M478_RS13435 PF07724 AAA domain (Cdc48 subfamily) M478_RS13440 PF05954 Phage late control gene D protein (GPD) M478_RS13445 PF09937 M478_RS13445 M478_RS13445 PF13599 Pentapeptide repeats (9 copies) M478_RS13450 PF00805 Pentapeptide repeats (8 copies) M478_RS13450 PF13599 Pentapeptide repeats (9 copies) M478_RS13455 PF12059 M478_RS13455 M478_RS13460 PF13665 M478_RS13460 M478_RS13465 PF12790 Type VI secretion lipoprotein M478_RS13470 PF05936 M478_RS13470 M478_RS13475 PF00691 OmpA family M478_RS13475 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) M478_RS13480 PF06744 M478_RS13480 M478_RS13480 PF06761 M478_RS13480 M478_RS13480 PF14331 M478_RS13480 M478_RS13490 PF00176 SNF2 family N-terminal domain M478_RS13490 PF00271 Helicase conserved C-terminal domain M478_RS13490 PF12137 RNA polymerase recycling family C-terminal M478_RS13495 PF00136 DNA polymerase family B M478_RS13495 PF03104 DNA polymerase family B, exonuclease domain M478_RS13500 PF09335 M478_RS13500 M478_RS13505 PF00005 ABC transporter M478_RS13510 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS13515 PF13343 Bacterial extracellular solute-binding protein M478_RS13525 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M478_RS13525 PF12793 M478_RS13525 M478_RS13535 PF07690 Major Facilitator Superfamily M478_RS13540 PF00694 Aconitase C-terminal domain M478_RS13545 PF00330 Aconitase family (aconitate hydratase) M478_RS13550 PF00180 Isocitrate/isopropylmalate dehydrogenase M478_RS13555 PF00682 HMGL-like M478_RS13555 PF08502 LeuA allosteric (dimerisation) domain M478_RS13560 PF01797 Transposase IS200 like M478_RS13575 PF02401 LytB protein M478_RS13580 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M478_RS13585 PF01252 M478_RS13585 M478_RS13590 PF00133 tRNA synthetases class I (I, L, M and V) M478_RS13590 PF06827 Zinc finger found in FPG and IleRS M478_RS13590 PF08264 Anticodon-binding domain of tRNA M478_RS13595 PF01687 Riboflavin kinase M478_RS13595 PF06574 FAD synthetase M478_RS13605 PF01649 Ribosomal protein S20 M478_RS13610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M478_RS13610 PF03466 LysR substrate binding domain M478_RS13615 PF06965 Na+/H+ antiporter 1 M478_RS13620 PF00226 DnaJ domain M478_RS13620 PF00684 DnaJ central domain M478_RS13620 PF01556 DnaJ C terminal domain M478_RS13625 PF00012 Hsp70 protein M478_RS13630 PF01184 M478_RS13630 M478_RS13640 PF07690 Major Facilitator Superfamily M478_RS13645 PF00994 Probable molybdopterin binding domain M478_RS13650 PF00923 Transaldolase M478_RS13655 PF03883 M478_RS13655 M478_RS13660 PF00291 Pyridoxal-phosphate dependent enzyme M478_RS13660 PF14821 Threonine synthase N terminus M478_RS13665 PF00288 GHMP kinases N terminal domain M478_RS13665 PF08544 GHMP kinases C terminal M478_RS13670 PF00696 Amino acid kinase family M478_RS13670 PF00742 Homoserine dehydrogenase M478_RS13670 PF01842 ACT domain M478_RS13670 PF03447 Homoserine dehydrogenase, NAD binding domain M478_RS13670 PF13840 ACT domain M478_RS13675 PF00072 Response regulator receiver domain M478_RS13675 PF00486 Transcriptional regulatory protein, C terminal M478_RS13680 PF05981 M478_RS13680 M478_RS13685 PF06445 GyrI-like small molecule binding domain M478_RS13685 PF12833 Helix-turn-helix domain M478_RS13690 PF00300 Histidine phosphatase superfamily (branch 1) M478_RS13695 PF01931 Protein of unknown function DUF84 M478_RS13700 PF01371 Trp repressor protein M478_RS13705 PF01464 Transglycosylase SLT domain M478_RS13705 PF14718 Soluble lytic murein transglycosylase L domain M478_RS13710 PF00122 E1-E2 ATPase M478_RS13710 PF00689 Cation transporting ATPase, C-terminus M478_RS13710 PF00690 Cation transporter/ATPase, N-terminus M478_RS13710 PF00702 haloacid dehalogenase-like hydrolase M478_RS13715 PF13689 M478_RS13715 M478_RS13720 PF00990 GGDEF domain M478_RS13720 PF17152 M478_RS13720 M478_RS13725 PF00691 OmpA family M478_RS13735 PF02661 Fic/DOC family M478_RS13735 PF13776 M478_RS13735 M478_RS13740 PF01381 Helix-turn-helix M478_RS13740 PF13521 AAA domain M478_RS13745 PF13481 AAA domain M478_RS13745 PF13541 Subunit ChlI of Mg-chelatase M478_RS13750 PF12710 haloacid dehalogenase-like hydrolase M478_RS13755 PF10144 M478_RS13755 M478_RS13760 PF01048 Phosphorylase superfamily M478_RS13765 PF01676 Metalloenzyme superfamily M478_RS13770 PF00591 Glycosyl transferase family, a/b domain M478_RS13770 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain M478_RS13775 PF00591 Glycosyl transferase family, a/b domain M478_RS13775 PF02885 Glycosyl transferase family, helical bundle domain M478_RS13780 PF01791 DeoC/LacD family aldolase M478_RS13785 PF01773 Na+ dependent nucleoside transporter N-terminus M478_RS13785 PF07662 Na+ dependent nucleoside transporter C-terminus M478_RS13785 PF07670 Nucleoside recognition M478_RS13790 PF01026 TatD related DNase M478_RS13795 PF01734 Patatin-like phospholipase M478_RS13800 PF07043 M478_RS13800 M478_RS13805 PF04972 BON domain M478_RS13810 PF00009 Elongation factor Tu GTP binding domain M478_RS13810 PF03144 Elongation factor Tu domain 2 M478_RS13810 PF16658 M478_RS13810 M478_RS13815 PF00583 Acetyltransferase (GNAT) family M478_RS13820 PF03603 DNA polymerase III psi subunit M478_RS13825 PF05175 Methyltransferase small domain M478_RS13825 PF08468 Methyltransferase small domain N-terminal M478_RS13835 PF07256 M478_RS13835 M478_RS13840 PF00990 GGDEF domain M478_RS13845 PF01095 Pectinesterase M478_RS13865 PF00873 AcrB/AcrD/AcrF family M478_RS13870 PF16576 M478_RS13870 M478_RS13875 PF06305 M478_RS13875 M478_RS13885 PF04932 M478_RS13885 M478_RS13890 PF01075 Glycosyltransferase family 9 (heptosyltransferase) M478_RS13895 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M478_RS13895 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M478_RS13910 PF00005 ABC transporter M478_RS13915 PF02653 M478_RS13915 M478_RS13920 PF02653 M478_RS13920 M478_RS13925 PF13407 Periplasmic binding protein domain M478_RS13930 PF01791 DeoC/LacD family aldolase M478_RS13935 PF03992 Antibiotic biosynthesis monooxygenase M478_RS13940 PF10696 M478_RS13940 M478_RS13945 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M478_RS13945 PF00381 PTS HPr component phosphorylation site M478_RS13945 PF00391 PEP-utilising enzyme, mobile domain M478_RS13945 PF02896 PEP-utilising enzyme, TIM barrel domain M478_RS13945 PF05524 PEP-utilising enzyme, N-terminal M478_RS13950 PF02378 Phosphotransferase system, EIIC M478_RS13955 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M478_RS13960 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M478_RS13965 PF12833 Helix-turn-helix domain M478_RS13975 PF05987 M478_RS13975 M478_RS13980 PF01435 Peptidase family M48 M478_RS13990 PF09983 M478_RS13990 M478_RS13990 PF11795 M478_RS13990 M478_RS13995 PF13558 Putative exonuclease SbcCD, C subunit M478_RS14020 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M478_RS14025 PF01555 DNA methylase M478_RS14030 PF01527 Transposase M478_RS14040 PF10117 M478_RS14040 M478_RS14045 PF07728 AAA domain (dynein-related subfamily) M478_RS14050 PF00665 Integrase core domain M478_RS14050 PF02796 Helix-turn-helix domain of resolvase M478_RS14060 PF01695 IstB-like ATP binding protein M478_RS14065 PF02580 D-Tyr-tRNA(Tyr) deacylase M478_RS14070 PF03631 M478_RS14070 M478_RS14075 PF13419 Haloacid dehalogenase-like hydrolase M478_RS14080 PF00009 Elongation factor Tu GTP binding domain M478_RS14080 PF00679 Elongation factor G C-terminus M478_RS14080 PF03144 Elongation factor Tu domain 2 M478_RS14090 PF00120 Glutamine synthetase, catalytic domain M478_RS14090 PF03951 Glutamine synthetase, beta-Grasp domain M478_RS14095 PF00512 His Kinase A (phospho-acceptor) domain M478_RS14095 PF00989 PAS fold M478_RS14095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M478_RS14100 PF00072 Response regulator receiver domain M478_RS14100 PF00158 Sigma-54 interaction domain M478_RS14100 PF02954 Bacterial regulatory protein, Fis family M478_RS14105 PF04055 Radical SAM superfamily M478_RS14105 PF06969 HemN C-terminal domain M478_RS14110 PF04220 M478_RS14110 M478_RS14115 PF01926 50S ribosome-binding GTPase M478_RS14120 PF01797 Transposase IS200 like M478_RS14130 PF01797 Transposase IS200 like M478_RS14140 PF00476 DNA polymerase family A M478_RS14140 PF01367 5'-3' exonuclease, C-terminal SAM fold M478_RS14140 PF01612 3'-5' exonuclease M478_RS14140 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M478_RS14145 PF01323 DSBA-like thioredoxin domain M478_RS14150 PF01636 Phosphotransferase enzyme family M478_RS14155 PF06288 Protein of unknown function (DUF1040) M478_RS14160 PF12804 MobA-like NTP transferase domain M478_RS14165 PF03205 Molybdopterin guanine dinucleotide synthesis protein B M478_RS14170 PF00872 M478_RS14170 M478_RS14210 PF01808 AICARFT/IMPCHase bienzyme M478_RS14210 PF02142 MGS-like domain M478_RS14215 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain M478_RS14215 PF02843 Phosphoribosylglycinamide synthetase, C domain M478_RS14215 PF02844 Phosphoribosylglycinamide synthetase, N domain M478_RS14220 PF07356 M478_RS14220 M478_RS14225 PF00216 Bacterial DNA-binding protein M478_RS14230 PF04222 Protein of unknown function (DUF416) M478_RS14235 PF04493 Endonuclease V M478_RS14240 PF01208 Uroporphyrinogen decarboxylase (URO-D) M478_RS14250 PF00293 NUDIX domain M478_RS14250 PF09297 NADH pyrophosphatase zinc ribbon domain M478_RS14255 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ M478_RS14265 PF01964 ThiC family M478_RS14265 PF13667 ThiC-associated domain M478_RS14270 PF02581 Thiamine monophosphate synthase/TENI M478_RS14275 PF00899 ThiF family M478_RS14280 PF02597 ThiS family M478_RS14285 PF05690 Thiazole biosynthesis protein ThiG M478_RS14290 PF04055 Radical SAM superfamily M478_RS14290 PF06968 Biotin and Thiamin Synthesis associated domain M478_RS14305 PF01797 Transposase IS200 like M478_RS14310 PF00623 RNA polymerase Rpb1, domain 2 M478_RS14310 PF04983 RNA polymerase Rpb1, domain 3 M478_RS14310 PF04997 RNA polymerase Rpb1, domain 1 M478_RS14310 PF04998 RNA polymerase Rpb1, domain 5 M478_RS14310 PF05000 RNA polymerase Rpb1, domain 4 M478_RS14315 PF00562 RNA polymerase Rpb2, domain 6 M478_RS14315 PF04560 RNA polymerase Rpb2, domain 7 M478_RS14315 PF04561 RNA polymerase Rpb2, domain 2 M478_RS14315 PF04563 RNA polymerase beta subunit M478_RS14315 PF04565 RNA polymerase Rpb2, domain 3 M478_RS14315 PF10385 RNA polymerase beta subunit external 1 domain M478_RS14320 PF00542 Ribosomal protein L7/L12 C-terminal domain M478_RS14320 PF16320 M478_RS14320 M478_RS14325 PF00466 Ribosomal protein L10 M478_RS14330 PF00687 Ribosomal protein L1p/L10e family M478_RS14335 PF00298 Ribosomal protein L11, RNA binding domain M478_RS14335 PF03946 Ribosomal protein L11, N-terminal domain M478_RS14340 PF00467 KOW motif M478_RS14340 PF02357 Transcription termination factor nusG M478_RS14345 PF00584 SecE/Sec61-gamma subunits of protein translocation complex M478_RS14350 PF00009 Elongation factor Tu GTP binding domain M478_RS14350 PF03143 Elongation factor Tu C-terminal domain M478_RS14350 PF03144 Elongation factor Tu domain 2 M478_RS14375 PF01695 IstB-like ATP binding protein M478_RS14385 PF13673 Acetyltransferase (GNAT) domain M478_RS14390 PF00485 Phosphoribulokinase / Uridine kinase family M478_RS14395 PF02237 Biotin protein ligase C terminal domain M478_RS14395 PF03099 Biotin/lipoate A/B protein ligase family M478_RS14395 PF08279 HTH domain M478_RS14400 PF01565 FAD binding domain M478_RS14400 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain M478_RS14425 PF12724 Flavodoxin domain M478_RS14430 PF02386 Cation transport protein M478_RS14435 PF01205 Uncharacterized protein family UPF0029 M478_RS14435 PF09186 Domain of unknown function (DUF1949) M478_RS14440 PF01797 Transposase IS200 like M478_RS14445 PF01205 Uncharacterized protein family UPF0029 M478_RS14450 PF00557 Metallopeptidase family M24 M478_RS14455 PF00378 Enoyl-CoA hydratase/isomerase family M478_RS14455 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M478_RS14455 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M478_RS14460 PF00108 Thiolase, N-terminal domain M478_RS14460 PF02803 Thiolase, C-terminal domain M478_RS14465 PF00175 Oxidoreductase NAD-binding domain M478_RS14465 PF00970 Oxidoreductase FAD-binding domain M478_RS14470 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase M478_RS14475 PF02357 Transcription termination factor nusG M478_RS14480 PF00490 Delta-aminolevulinic acid dehydratase M478_RS14485 PF01026 TatD related DNase M478_RS14490 PF01695 IstB-like ATP binding protein M478_RS14500 PF01026 TatD related DNase M478_RS14505 PF00902 Sec-independent protein translocase protein (TatC) M478_RS14515 PF02416 mttA/Hcf106 family M478_RS14520 PF03109 M478_RS14520 M478_RS14525 PF02036 SCP-2 sterol transfer family M478_RS14530 PF01209 ubiE/COQ5 methyltransferase family M478_RS14535 PF02646 M478_RS14535 M478_RS14540 PF09335 M478_RS14540 M478_RS14545 PF02554 M478_RS14545 M478_RS14545 PF13722 M478_RS14545 M478_RS14550 PF13350 Tyrosine phosphatase family M478_RS14555 PF01048 Phosphorylase superfamily M478_RS14560 PF01738 Dienelactone hydrolase family M478_RS14565 PF01717 Cobalamin-independent synthase, Catalytic domain M478_RS14565 PF08267 Cobalamin-independent synthase, N-terminal domain M478_RS14570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M478_RS14570 PF03466 LysR substrate binding domain M478_RS14575 PF00892 EamA-like transporter family M478_RS14580 PF03547 M478_RS14580 M478_RS14585 PF03009 Glycerophosphoryl diester phosphodiesterase family M478_RS14590 PF00005 ABC transporter M478_RS14590 PF08402 TOBE domain M478_RS14595 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS14600 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS14605 PF13416 Bacterial extracellular solute-binding protein M478_RS14610 PF04449 CS1 type fimbrial major subunit M478_RS14615 PF16967 M478_RS14615 M478_RS14630 PF04449 CS1 type fimbrial major subunit M478_RS14645 PF00005 ABC transporter M478_RS14650 PF00005 ABC transporter M478_RS14650 PF12399 Branched-chain amino acid ATP-binding cassette transporter M478_RS14655 PF02653 M478_RS14655 M478_RS14655 PF11862 M478_RS14655 M478_RS14660 PF02653 M478_RS14660 M478_RS14665 PF13458 Periplasmic binding protein M478_RS14670 PF12568 Acetyltransferase (GNAT) domain M478_RS14675 PF01797 Transposase IS200 like M478_RS14685 PF00140 Sigma-70 factor, region 1 M478_RS14685 PF04542 Sigma-70 region 2 M478_RS14685 PF04545 Sigma-70, region 4 M478_RS14690 PF02687 M478_RS14690 M478_RS14695 PF00005 ABC transporter M478_RS14700 PF00448 SRP54-type protein, GTPase domain M478_RS14700 PF02881 SRP54-type protein, helical bundle domain M478_RS14710 PF03602 Conserved hypothetical protein 95 M478_RS14715 PF06611 M478_RS14715 M478_RS14720 PF10694 Protein of unknown function (DUF2500) M478_RS14725 PF08850 M478_RS14725 M478_RS14730 PF07947 M478_RS14730 M478_RS14735 PF00122 E1-E2 ATPase M478_RS14735 PF00403 Heavy-metal-associated domain M478_RS14735 PF00702 haloacid dehalogenase-like hydrolase M478_RS14740 PF01206 Sulfurtransferase TusA M478_RS14745 PF02592 M478_RS14745 M478_RS14750 PF08786 Domain of unknown function (DUF1795) M478_RS14755 PF02754 M478_RS14755 M478_RS14755 PF13183 4Fe-4S dicluster domain M478_RS14760 PF00890 FAD binding domain M478_RS14765 PF01266 FAD dependent oxidoreductase M478_RS14765 PF04324 BFD-like [2Fe-2S] binding domain M478_RS14765 PF16901 M478_RS14765 M478_RS14775 PF03009 Glycerophosphoryl diester phosphodiesterase family M478_RS14780 PF03272 M478_RS14780 M478_RS14785 PF08282 haloacid dehalogenase-like hydrolase M478_RS14790 PF12146 Putative lysophospholipase M478_RS14795 PF01810 M478_RS14795 M478_RS14800 PF01810 M478_RS14800 M478_RS14805 PF00270 DEAD/DEAH box helicase M478_RS14805 PF00271 Helicase conserved C-terminal domain M478_RS14805 PF00570 HRDC domain M478_RS14805 PF09382 RQC domain M478_RS14805 PF16124 M478_RS14805 M478_RS14810 PF02253 Phospholipase A1 M478_RS14815 PF03061 Thioesterase superfamily M478_RS14820 PF00892 EamA-like transporter family M478_RS14825 PF01544 CorA-like Mg2+ transporter protein M478_RS14830 PF09370 TIM-barrel signal transduction protein M478_RS14835 PF06792 Uncharacterised protein family (UPF0261) M478_RS14840 PF00440 Bacterial regulatory proteins, tetR family M478_RS14845 PF00580 UvrD/REP helicase N-terminal domain M478_RS14845 PF13361 UvrD-like helicase C-terminal domain M478_RS14850 PF00702 haloacid dehalogenase-like hydrolase M478_RS14855 PF00589 Phage integrase family M478_RS14855 PF02899 Phage integrase, N-terminal SAM-like domain M478_RS14860 PF04340 Protein of unknown function, DUF484 M478_RS14865 PF01678 Diaminopimelate epimerase M478_RS14870 PF13627 M478_RS14870 M478_RS14875 PF01491 Frataxin-like domain M478_RS14880 PF01295 M478_RS14880 M478_RS14880 PF12633 M478_RS14880 M478_RS14890 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain M478_RS14890 PF03900 Porphobilinogen deaminase, C-terminal domain M478_RS14895 PF02602 Uroporphyrinogen-III synthase HemD M478_RS14900 PF04375 M478_RS14900 M478_RS14905 PF07219 M478_RS14905 M478_RS14935 PF00324 Amino acid permease M478_RS14940 PF03808 M478_RS14940 M478_RS14945 PF06899 M478_RS14945 M478_RS14950 PF07429 M478_RS14950 M478_RS14955 PF01943 M478_RS14955 M478_RS14960 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family M478_RS14965 PF00583 Acetyltransferase (GNAT) family M478_RS14970 PF00483 Nucleotidyl transferase M478_RS14975 PF16363 M478_RS14975 M478_RS14980 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M478_RS14980 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M478_RS14980 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M478_RS14985 PF02350 UDP-N-acetylglucosamine 2-epimerase M478_RS14990 PF02706 Chain length determinant protein M478_RS14995 PF00953 Glycosyl transferase family 4 M478_RS15000 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M478_RS15000 PF07497 Rho termination factor, RNA-binding domain M478_RS15000 PF07498 Rho termination factor, N-terminal domain M478_RS15005 PF00085 Thioredoxin M478_RS15010 PF00270 DEAD/DEAH box helicase M478_RS15010 PF00271 Helicase conserved C-terminal domain M478_RS15015 PF02541 Ppx/GppA phosphatase family M478_RS15020 PF02541 Ppx/GppA phosphatase family M478_RS15025 PF00580 UvrD/REP helicase N-terminal domain M478_RS15025 PF13361 UvrD-like helicase C-terminal domain M478_RS15035 PF13616 PPIC-type PPIASE domain M478_RS15040 PF05096 Glutamine cyclotransferase M478_RS15045 PF00872 M478_RS15045 M478_RS15055 PF16970 M478_RS15055 M478_RS15060 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M478_RS15060 PF02753 Pili assembly chaperone PapD, C-terminal domain M478_RS15065 PF00577 Outer membrane usher protein M478_RS15065 PF13953 PapC C-terminal domain M478_RS15065 PF13954 PapC N-terminal domain M478_RS15070 PF00419 Fimbrial protein M478_RS15075 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M478_RS15075 PF02753 Pili assembly chaperone PapD, C-terminal domain M478_RS15085 PF01320 Colicin immunity protein / pyocin immunity protein M478_RS15100 PF06958 S-type Pyocin M478_RS15110 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain M478_RS15110 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain M478_RS15115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M478_RS15115 PF03466 LysR substrate binding domain M478_RS15125 PF11692 M478_RS15125 M478_RS15130 PF11692 M478_RS15130 M478_RS15135 PF06092 M478_RS15135 M478_RS15140 PF06092 M478_RS15140 M478_RS15145 PF00291 Pyridoxal-phosphate dependent enzyme M478_RS15145 PF00585 C-terminal regulatory domain of Threonine dehydratase M478_RS15150 PF00920 Dehydratase family M478_RS15155 PF01063 Aminotransferase class IV M478_RS15160 PF13710 ACT domain M478_RS15165 PF00205 Thiamine pyrophosphate enzyme, central domain M478_RS15165 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M478_RS15165 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M478_RS15170 PF01078 Magnesium chelatase, subunit ChlI M478_RS15170 PF13335 M478_RS15170 M478_RS15170 PF13541 Subunit ChlI of Mg-chelatase M478_RS15175 PF04219 M478_RS15175 M478_RS15180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M478_RS15180 PF03466 LysR substrate binding domain M478_RS15185 PF02653 M478_RS15185 M478_RS15190 PF02653 M478_RS15190 M478_RS15195 PF00005 ABC transporter M478_RS15200 PF13407 Periplasmic binding protein domain M478_RS15240 PF01177 Asp/Glu/Hydantoin racemase M478_RS15245 PF00593 TonB dependent receptor M478_RS15245 PF07715 TonB-dependent Receptor Plug Domain M478_RS15255 PF05958 tRNA (Uracil-5-)-methyltransferase M478_RS15260 PF07226 M478_RS15260 M478_RS15265 PF00440 Bacterial regulatory proteins, tetR family M478_RS15270 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M478_RS15270 PF07992 Pyridine nucleotide-disulphide oxidoreductase M478_RS15275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M478_RS15275 PF03466 LysR substrate binding domain M478_RS15280 PF00462 Glutaredoxin M478_RS15280 PF08534 Redoxin M478_RS15285 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M478_RS15285 PF07992 Pyridine nucleotide-disulphide oxidoreductase M478_RS15290 PF03544 Gram-negative bacterial TonB protein C-terminal M478_RS15295 PF13437 HlyD family secretion protein M478_RS15295 PF13533 Biotin-lipoyl like M478_RS15300 PF00005 ABC transporter M478_RS15300 PF00664 ABC transporter transmembrane region M478_RS15305 PF06438 Heme-binding protein A (HasA) M478_RS15310 PF00593 TonB dependent receptor M478_RS15310 PF07715 TonB-dependent Receptor Plug Domain M478_RS15320 PF00206 Lyase M478_RS15320 PF14698 Argininosuccinate lyase C-terminal M478_RS15325 PF00696 Amino acid kinase family M478_RS15330 PF01118 Semialdehyde dehydrogenase, NAD binding domain M478_RS15330 PF02774 Semialdehyde dehydrogenase, dimerisation domain M478_RS15335 PF01546 Peptidase family M20/M25/M40 M478_RS15335 PF07687 Peptidase dimerisation domain M478_RS15340 PF00311 Phosphoenolpyruvate carboxylase M478_RS15345 PF13518 Helix-turn-helix domain M478_RS15350 PF00665 Integrase core domain M478_RS15350 PF13276 M478_RS15350 M478_RS15355 PF02219 Methylenetetrahydrofolate reductase M478_RS15360 PF00696 Amino acid kinase family M478_RS15360 PF00742 Homoserine dehydrogenase M478_RS15360 PF03447 Homoserine dehydrogenase, NAD binding domain M478_RS15370 PF01340 Met Apo-repressor, MetJ M478_RS15380 PF05360 M478_RS15380 M478_RS15385 PF01197 Ribosomal protein L31 M478_RS15390 PF00270 DEAD/DEAH box helicase M478_RS15390 PF00271 Helicase conserved C-terminal domain M478_RS15405 PF05036 Sporulation related domain M478_RS15410 PF00227 Proteasome subunit M478_RS15415 PF00004 ATPase family associated with various cellular activities (AAA) M478_RS15415 PF07724 AAA domain (Cdc48 subfamily) M478_RS15415 PF10431 C-terminal, D2-small domain, of ClpB protein M478_RS15420 PF01040 UbiA prenyltransferase family M478_RS15425 PF03737 Demethylmenaquinone methyltransferase M478_RS15430 PF14016 M478_RS15430 M478_RS15445 PF13437 HlyD family secretion protein M478_RS15450 PF00005 ABC transporter M478_RS15450 PF00664 ABC transporter transmembrane region M478_RS15450 PF03412 Peptidase C39 family M478_RS15455 PF01695 IstB-like ATP binding protein M478_RS15460 PF01695 IstB-like ATP binding protein M478_RS15475 PF01797 Transposase IS200 like M478_RS15480 PF06005 Protein of unknown function (DUF904) M478_RS15490 PF00230 Major intrinsic protein M478_RS15495 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M478_RS15495 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M478_RS15500 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded M478_RS15505 PF00175 Oxidoreductase NAD-binding domain M478_RS15505 PF00970 Oxidoreductase FAD-binding domain M478_RS15510 PF05656 M478_RS15510 M478_RS15515 PF07305 M478_RS15515 M478_RS15520 PF00121 Triosephosphate isomerase M478_RS15525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M478_RS15525 PF03466 LysR substrate binding domain M478_RS15530 PF02585 GlcNAc-PI de-N-acetylase M478_RS15535 PF03737 Demethylmenaquinone methyltransferase M478_RS15540 PF00939 Sodium:sulfate symporter transmembrane region M478_RS15545 PF13531 Bacterial extracellular solute-binding protein M478_RS15550 PF13531 Bacterial extracellular solute-binding protein M478_RS15555 PF00365 Phosphofructokinase M478_RS15560 PF01545 Cation efflux family M478_RS15560 PF16916 M478_RS15560 M478_RS15565 PF04754 M478_RS15565 M478_RS15570 PF07813 LTXXQ motif family protein M478_RS15575 PF00072 Response regulator receiver domain M478_RS15575 PF00486 Transcriptional regulatory protein, C terminal M478_RS15580 PF00512 His Kinase A (phospho-acceptor) domain M478_RS15580 PF00672 HAMP domain M478_RS15580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M478_RS15580 PF16527 M478_RS15580 M478_RS15585 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M478_RS15585 PF02805 Metal binding domain of Ada M478_RS15585 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M478_RS15585 PF12833 Helix-turn-helix domain M478_RS15590 PF00588 SpoU rRNA Methylase family M478_RS15595 PF00132 Bacterial transferase hexapeptide (six repeats) M478_RS15595 PF06426 Serine acetyltransferase, N-terminal M478_RS15605 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus M478_RS15605 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus M478_RS15610 PF02556 Preprotein translocase subunit SecB M478_RS15615 PF00462 Glutaredoxin M478_RS15620 PF00581 Rhodanese-like domain M478_RS15625 PF01676 Metalloenzyme superfamily M478_RS15625 PF06415 BPG-independent PGAM N-terminus (iPGM_N) M478_RS15630 PF01551 Peptidase family M23 M478_RS15640 PF00107 Zinc-binding dehydrogenase M478_RS15640 PF08240 Alcohol dehydrogenase GroES-like domain M478_RS15645 PF00155 Aminotransferase class I and II M478_RS15650 PF01370 NAD dependent epimerase/dehydratase family M478_RS15655 PF01075 Glycosyltransferase family 9 (heptosyltransferase) M478_RS15660 PF01075 Glycosyltransferase family 9 (heptosyltransferase) M478_RS15665 PF00534 Glycosyl transferases group 1 M478_RS15665 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) M478_RS15670 PF00535 Glycosyl transferase family 2 M478_RS15675 PF01467 Cytidylyltransferase M478_RS15680 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain M478_RS15680 PF06827 Zinc finger found in FPG and IleRS M478_RS15680 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain M478_RS15685 PF00471 Ribosomal protein L33 M478_RS15690 PF00830 Ribosomal L28 family M478_RS15695 PF04002 RadC-like JAB domain M478_RS15700 PF02441 Flavoprotein M478_RS15700 PF04127 DNA / pantothenate metabolism flavoprotein M478_RS15705 PF00692 dUTPase M478_RS15710 PF00440 Bacterial regulatory proteins, tetR family M478_RS15715 PF00156 Phosphoribosyl transferase domain M478_RS15720 PF01138 3' exoribonuclease family, domain 1 M478_RS15720 PF03725 3' exoribonuclease family, domain 2 M478_RS15725 PF03755 M478_RS15725 M478_RS15725 PF08340 M478_RS15725 M478_RS15730 PF03458 M478_RS15730 M478_RS15735 PF01653 NAD-dependent DNA ligase adenylation domain M478_RS15735 PF03120 NAD-dependent DNA ligase OB-fold domain M478_RS15740 PF00625 Guanylate kinase M478_RS15745 PF01192 RNA polymerase Rpb6 M478_RS15750 PF02824 TGS domain M478_RS15750 PF04607 Region found in RelA / SpoT proteins M478_RS15750 PF13291 ACT domain M478_RS15750 PF13328 HD domain M478_RS15755 PF00588 SpoU rRNA Methylase family M478_RS15755 PF12105 SpoU, rRNA methylase, C-terminal M478_RS15760 PF00270 DEAD/DEAH box helicase M478_RS15760 PF00271 Helicase conserved C-terminal domain M478_RS15760 PF17191 M478_RS15760 M478_RS15765 PF03616 M478_RS15765 M478_RS15770 PF00860 Permease family M478_RS15780 PF00583 Acetyltransferase (GNAT) family M478_RS15780 PF09500 Putative thioesterase (yiiD_Cterm) M478_RS15785 PF00665 Integrase core domain M478_RS15785 PF02796 Helix-turn-helix domain of resolvase M478_RS15790 PF01695 IstB-like ATP binding protein M478_RS15795 PF13409 Glutathione S-transferase, N-terminal domain M478_RS15795 PF13410 Glutathione S-transferase, C-terminal domain M478_RS15800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M478_RS15800 PF03466 LysR substrate binding domain M478_RS15805 PF02678 Pirin M478_RS15810 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M478_RS15815 PF04348 LppC putative lipoprotein M478_RS15820 PF02021 Uncharacterised protein family UPF0102 M478_RS15825 PF13580 SIS domain M478_RS15830 PF04972 BON domain M478_RS15835 PF00912 Transglycosylase M478_RS15850 PF00072 Response regulator receiver domain M478_RS15850 PF00512 His Kinase A (phospho-acceptor) domain M478_RS15850 PF00989 PAS fold M478_RS15850 PF01627 Hpt domain M478_RS15850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M478_RS15860 PF04055 Radical SAM superfamily M478_RS15860 PF16199 M478_RS15860 M478_RS15865 PF00310 Glutamine amidotransferases class-II M478_RS15865 PF01493 GXGXG motif M478_RS15865 PF01645 Conserved region in glutamate synthase M478_RS15865 PF04898 Glutamate synthase central domain M478_RS15870 PF07992 Pyridine nucleotide-disulphide oxidoreductase M478_RS15870 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster M478_RS15880 PF04386 Stringent starvation protein B M478_RS15885 PF00043 Glutathione S-transferase, C-terminal domain M478_RS15885 PF02798 Glutathione S-transferase, N-terminal domain M478_RS15895 PF00380 Ribosomal protein S9/S16 M478_RS15900 PF00572 Ribosomal protein L13 M478_RS15905 PF03969 AFG1-like ATPase M478_RS15910 PF06295 M478_RS15910 M478_RS15915 PF00595 PDZ domain (Also known as DHR or GLGF) M478_RS15915 PF13180 PDZ domain M478_RS15915 PF13365 Trypsin-like peptidase domain M478_RS15920 PF01797 Transposase IS200 like M478_RS15925 PF13180 PDZ domain M478_RS15925 PF13365 Trypsin-like peptidase domain M478_RS15930 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M478_RS15935 PF01722 BolA-like protein M478_RS15940 PF13466 STAS domain M478_RS15945 PF05494 Toluene tolerance, Ttg2 M478_RS15950 PF02470 M478_RS15950 M478_RS15955 PF02405 M478_RS15955 M478_RS15960 PF00005 ABC transporter M478_RS15965 PF01699 Sodium/calcium exchanger protein M478_RS15970 PF00571 CBS domain M478_RS15970 PF01380 SIS domain M478_RS15975 PF08282 haloacid dehalogenase-like hydrolase M478_RS15980 PF06835 Lipopolysaccharide-assembly, LptC-related M478_RS15985 PF03968 OstA-like protein M478_RS15990 PF00005 ABC transporter M478_RS15990 PF12399 Branched-chain amino acid ATP-binding cassette transporter M478_RS15995 PF00309 M478_RS15995 M478_RS15995 PF04552 Sigma-54, DNA binding domain M478_RS15995 PF04963 Sigma-54 factor, core binding domain M478_RS16005 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M478_RS16010 PF03668 M478_RS16010 M478_RS16015 PF00381 PTS HPr component phosphorylation site M478_RS16020 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M478_RS16020 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M478_RS16025 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain M478_RS16025 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain M478_RS16030 PF01042 Endoribonuclease L-PSP M478_RS16035 PF16743 M478_RS16035 M478_RS16040 PF00356 Bacterial regulatory proteins, lacI family M478_RS16040 PF13377 Periplasmic binding protein-like domain M478_RS16045 PF00367 phosphotransferase system, EIIB M478_RS16045 PF02378 Phosphotransferase system, EIIC M478_RS16050 PF00128 Alpha amylase, catalytic domain M478_RS16050 PF11941 Domain of unknown function (DUF3459) M478_RS16055 PF01272 Transcription elongation factor, GreA/GreB, C-term M478_RS16055 PF14760 Rnk N-terminus M478_RS16060 PF07361 Cytochrome b562 M478_RS16070 PF01523 Putative modulator of DNA gyrase M478_RS16075 PF04751 Protein of unknown function (DUF615) M478_RS16080 PF01337 Barstar (barnase inhibitor) M478_RS16085 PF00545 ribonuclease M478_RS16090 PF00171 Aldehyde dehydrogenase family M478_RS16095 PF00171 Aldehyde dehydrogenase family M478_RS16100 PF04632 M478_RS16100 M478_RS16105 PF13437 HlyD family secretion protein M478_RS16105 PF13533 Biotin-lipoyl like M478_RS16110 PF07869 M478_RS16110 M478_RS16115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M478_RS16115 PF03466 LysR substrate binding domain M478_RS16120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M478_RS16125 PF03538 Salmonella virulence plasmid 28 M478_RS16135 PF03534 Salmonella virulence plasmid 65kDa B protein M478_RS16135 PF12255 Insecticide toxin TcdB middle/C-terminal region M478_RS16135 PF12256 Insecticide toxin TcdB middle/N-terminal region M478_RS16140 PF16083 M478_RS16140 M478_RS16145 PF13539 D-alanyl-D-alanine carboxypeptidase M478_RS16150 PF10828 M478_RS16150 M478_RS16155 PF00782 Dual specificity phosphatase, catalytic domain M478_RS16165 PF01523 Putative modulator of DNA gyrase M478_RS16170 PF00795 Carbon-nitrogen hydrolase M478_RS16175 PF13116 M478_RS16175 M478_RS16175 PF13502 M478_RS16175 M478_RS16180 PF00575 S1 RNA binding domain M478_RS16180 PF10150 Ribonuclease E/G family M478_RS16185 PF02545 Maf-like protein M478_RS16190 PF04093 M478_RS16190 M478_RS16195 PF04085 rod shape-determining protein MreC M478_RS16200 PF06723 MreB/Mbl protein M478_RS16205 PF00563 EAL domain M478_RS16205 PF00990 GGDEF domain M478_RS16205 PF17157 M478_RS16205 M478_RS16210 PF00107 Zinc-binding dehydrogenase M478_RS16210 PF08240 Alcohol dehydrogenase GroES-like domain M478_RS16215 PF00174 Oxidoreductase molybdopterin binding domain M478_RS16220 PF01794 M478_RS16220 M478_RS16225 PF01220 Dehydroquinase class II M478_RS16230 PF00364 Biotin-requiring enzyme M478_RS16235 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain M478_RS16235 PF02785 Biotin carboxylase C-terminal domain M478_RS16235 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M478_RS16240 PF06196 M478_RS16240 M478_RS16245 PF00474 Sodium:solute symporter family M478_RS16250 PF06325 Ribosomal protein L11 methyltransferase (PrmA) M478_RS16255 PF01207 Dihydrouridine synthase (Dus) M478_RS16260 PF02954 Bacterial regulatory protein, Fis family M478_RS16270 PF00392 Bacterial regulatory proteins, gntR family M478_RS16270 PF07729 FCD domain M478_RS16275 PF07690 Major Facilitator Superfamily M478_RS16280 PF02627 Carboxymuconolactone decarboxylase family M478_RS16285 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M478_RS16285 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M478_RS16290 PF00753 Metallo-beta-lactamase superfamily M478_RS16295 PF05433 M478_RS16295 M478_RS16305 PF00313 'Cold-shock' DNA-binding domain M478_RS16310 PF00313 'Cold-shock' DNA-binding domain M478_RS16315 PF01797 Transposase IS200 like M478_RS16330 PF13449 Esterase-like activity of phytase M478_RS16335 PF00043 Glutathione S-transferase, C-terminal domain M478_RS16335 PF02798 Glutathione S-transferase, N-terminal domain M478_RS16340 PF01380 SIS domain M478_RS16345 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M478_RS16345 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M478_RS16350 PF02653 M478_RS16350 M478_RS16355 PF02653 M478_RS16355 M478_RS16360 PF00005 ABC transporter M478_RS16365 PF13407 Periplasmic binding protein domain M478_RS16370 PF03279 M478_RS16370 M478_RS16380 PF00999 Sodium/hydrogen exchanger family M478_RS16385 PF00860 Permease family M478_RS16390 PF04221 RelB antitoxin M478_RS16395 PF00005 ABC transporter M478_RS16400 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS16405 PF00296 Luciferase-like monooxygenase M478_RS16410 PF09084 NMT1/THI5 like M478_RS16415 PF03358 NADPH-dependent FMN reductase M478_RS16420 PF01791 DeoC/LacD family aldolase M478_RS16425 PF00294 pfkB family carbohydrate kinase M478_RS16430 PF05025 RbsD / FucU transport protein family M478_RS16435 PF02311 AraC-like ligand binding domain M478_RS16435 PF12833 Helix-turn-helix domain M478_RS16440 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M478_RS16445 PF01261 Xylose isomerase-like TIM barrel M478_RS16455 PF03527 M478_RS16455 M478_RS16455 PF05488 PAAR motif M478_RS16455 PF05593 M478_RS16455 M478_RS16460 PF08786 Domain of unknown function (DUF1795) M478_RS16465 PF05954 Phage late control gene D protein (GPD) M478_RS16470 PF01381 Helix-turn-helix M478_RS16475 PF08845 M478_RS16475 M478_RS16480 PF08845 M478_RS16480 M478_RS16485 PF09346 SMI1 / KNR4 family (SUKH-1) M478_RS16490 PF03527 M478_RS16490 M478_RS16490 PF14414 M478_RS16490 M478_RS16495 PF05488 PAAR motif M478_RS16495 PF05593 M478_RS16495 M478_RS16500 PF08786 Domain of unknown function (DUF1795) M478_RS16505 PF05954 Phage late control gene D protein (GPD) M478_RS16510 PF12486 M478_RS16510 M478_RS16515 PF06812 M478_RS16515 M478_RS16525 PF06812 M478_RS16525 M478_RS16525 PF16989 M478_RS16525 M478_RS16530 PF11319 M478_RS16530 M478_RS16535 PF02954 Bacterial regulatory protein, Fis family M478_RS16540 PF00004 ATPase family associated with various cellular activities (AAA) M478_RS16540 PF07724 AAA domain (Cdc48 subfamily) M478_RS16540 PF10431 C-terminal, D2-small domain, of ClpB protein M478_RS16545 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) M478_RS16550 PF05936 M478_RS16550 M478_RS16555 PF12790 Type VI secretion lipoprotein M478_RS16565 PF06996 M478_RS16565 M478_RS16570 PF05947 M478_RS16570 M478_RS16575 PF13518 Helix-turn-helix domain M478_RS16580 PF00665 Integrase core domain M478_RS16580 PF13276 M478_RS16580 M478_RS16585 PF00665 Integrase core domain M478_RS16585 PF02796 Helix-turn-helix domain of resolvase M478_RS16595 PF01695 IstB-like ATP binding protein M478_RS16600 PF05947 M478_RS16600 M478_RS16605 PF04965 Gene 25-like lysozyme M478_RS16610 PF05943 M478_RS16610 M478_RS16615 PF05591 M478_RS16615 M478_RS16620 PF05638 Protein of unknown function (DUF796) M478_RS16630 PF07148 M478_RS16630 M478_RS16635 PF02264 LamB porin M478_RS16640 PF00005 ABC transporter M478_RS16640 PF08402 TOBE domain M478_RS16650 PF13416 Bacterial extracellular solute-binding protein M478_RS16655 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS16655 PF14785 Maltose transport system permease protein MalF P2 domain M478_RS16660 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS16665 PF06146 M478_RS16665 M478_RS16670 PF00342 Phosphoglucose isomerase M478_RS16675 PF00696 Amino acid kinase family M478_RS16680 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB M478_RS16680 PF08479 POTRA domain, ShlB-type M478_RS16685 PF05860 haemagglutination activity domain M478_RS16685 PF13332 M478_RS16685 M478_RS16690 PF00809 Pterin binding enzyme M478_RS16690 PF02310 B12 binding domain M478_RS16690 PF02574 Homocysteine S-methyltransferase M478_RS16690 PF02607 B12 binding domain M478_RS16690 PF02965 Vitamin B12 dependent methionine synthase, activation domain M478_RS16695 PF09339 IclR helix-turn-helix domain M478_RS16700 PF01614 Bacterial transcriptional regulator M478_RS16705 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) M478_RS16710 PF00463 Isocitrate lyase family M478_RS16715 PF01274 Malate synthase M478_RS16720 PF04204 Homoserine O-succinyltransferase M478_RS16760 PF00392 Bacterial regulatory proteins, gntR family M478_RS16760 PF07729 FCD domain M478_RS16765 PF07690 Major Facilitator Superfamily M478_RS16775 PF00294 pfkB family carbohydrate kinase M478_RS16780 PF05025 RbsD / FucU transport protein family M478_RS16785 PF02705 M478_RS16785 M478_RS16790 PF07728 AAA domain (dynein-related subfamily) M478_RS16790 PF12592 Protein of unknown function (DUF3763) M478_RS16795 PF05762 VWA domain containing CoxE-like protein M478_RS16800 PF03590 Aspartate-ammonia ligase M478_RS16805 PF01037 AsnC family M478_RS16805 PF13412 Winged helix-turn-helix DNA-binding M478_RS16810 PF00258 Flavodoxin M478_RS16815 PF01134 Glucose inhibited division protein A M478_RS16815 PF13932 GidA associated domain 3 M478_RS16820 PF02527 rRNA small subunit methyltransferase G M478_RS16825 PF03899 M478_RS16825 M478_RS16830 PF00119 ATP synthase A chain M478_RS16835 PF00137 ATP synthase subunit C M478_RS16840 PF00430 ATP synthase B/B' CF(0) M478_RS16845 PF00213 ATP synthase delta (OSCP) subunit M478_RS16850 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M478_RS16850 PF00306 ATP synthase alpha/beta chain, C terminal domain M478_RS16850 PF02874 ATP synthase alpha/beta family, beta-barrel domain M478_RS16855 PF00231 ATP synthase M478_RS16860 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M478_RS16860 PF02874 ATP synthase alpha/beta family, beta-barrel domain M478_RS16865 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain M478_RS16865 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain M478_RS16870 PF00132 Bacterial transferase hexapeptide (six repeats) M478_RS16870 PF12804 MobA-like NTP transferase domain M478_RS16875 PF01380 SIS domain M478_RS16875 PF13522 Glutamine amidotransferase domain M478_RS16880 PF12849 PBP superfamily domain M478_RS16885 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS16890 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS16895 PF00005 ABC transporter M478_RS16900 PF01895 PhoU domain M478_RS16905 PF04519 M478_RS16905 M478_RS16910 PF00497 Bacterial extracellular solute-binding proteins, family 3 M478_RS16915 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS16920 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS16925 PF13419 Haloacid dehalogenase-like hydrolase M478_RS16930 PF00860 Permease family M478_RS16945 PF07055 Enoyl reductase FAD binding domain M478_RS16945 PF12241 Trans-2-enoyl-CoA reductase catalytic region M478_RS16945 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase M478_RS16950 PF01926 50S ribosome-binding GTPase M478_RS16950 PF10396 GTP-binding protein TrmE N-terminus M478_RS16950 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE M478_RS16955 PF02096 60Kd inner membrane protein M478_RS16955 PF14849 YidC periplasmic domain M478_RS16960 PF00825 Ribonuclease P M478_RS16965 PF00468 Ribosomal protein L34 M478_RS16970 PF00308 Bacterial dnaA protein M478_RS16970 PF08299 Bacterial dnaA protein helix-turn-helix M478_RS16970 PF11638 DnaA N-terminal domain M478_RS16975 PF00712 DNA polymerase III beta subunit, N-terminal domain M478_RS16975 PF02767 DNA polymerase III beta subunit, central domain M478_RS16975 PF02768 DNA polymerase III beta subunit, C-terminal domain M478_RS16985 PF02463 RecF/RecN/SMC N terminal domain M478_RS16990 PF00204 DNA gyrase B M478_RS16990 PF00986 DNA gyrase B subunit, carboxyl terminus M478_RS16990 PF01751 Toprim domain M478_RS16990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M478_RS16995 PF08282 haloacid dehalogenase-like hydrolase M478_RS17000 PF00665 Integrase core domain M478_RS17000 PF13276 M478_RS17000 M478_RS17005 PF13518 Helix-turn-helix domain M478_RS17010 PF02423 Ornithine cyclodeaminase/mu-crystallin family M478_RS17015 PF00291 Pyridoxal-phosphate dependent enzyme M478_RS17025 PF07676 WD40-like Beta Propeller Repeat M478_RS17030 PF07119 M478_RS17030 M478_RS17035 PF00011 Hsp20/alpha crystallin family M478_RS17040 PF00011 Hsp20/alpha crystallin family M478_RS17045 PF02080 TrkA-C domain M478_RS17045 PF06826 M478_RS17045 M478_RS17050 PF00155 Aminotransferase class I and II M478_RS17060 PF00128 Alpha amylase, catalytic domain M478_RS17065 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M478_RS17065 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M478_RS17075 PF00691 OmpA family M478_RS17075 PF13488 M478_RS17075 M478_RS17080 PF13673 Acetyltransferase (GNAT) domain M478_RS17085 PF03352 Methyladenine glycosylase M478_RS17090 PF02091 Glycyl-tRNA synthetase alpha subunit M478_RS17095 PF02092 M478_RS17095 M478_RS17095 PF05746 DALR anticodon binding domain M478_RS17100 PF11254 M478_RS17100 M478_RS17105 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M478_RS17105 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M478_RS17105 PF02378 Phosphotransferase system, EIIC M478_RS17110 PF01232 Mannitol dehydrogenase Rossmann domain M478_RS17110 PF08125 Mannitol dehydrogenase C-terminal domain M478_RS17115 PF05068 Mannitol repressor M478_RS17120 PF10928 Protein of unknown function (DUF2810) M478_RS17125 PF10517 M478_RS17125 M478_RS17135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M478_RS17135 PF00672 HAMP domain M478_RS17135 PF16591 M478_RS17135 M478_RS17140 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M478_RS17140 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M478_RS17145 PF02634 FdhD/NarQ family M478_RS17150 PF00384 Molybdopterin oxidoreductase M478_RS17150 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M478_RS17155 PF00384 Molybdopterin oxidoreductase M478_RS17155 PF01568 Molydopterin dinucleotide binding domain M478_RS17160 PF09163 Formate dehydrogenase N, transmembrane M478_RS17160 PF13247 4Fe-4S dicluster domain M478_RS17165 PF01292 Prokaryotic cytochrome b561 M478_RS17170 PF04216 Protein involved in formate dehydrogenase formation M478_RS17175 PF03841 L-seryl-tRNA selenium transferase M478_RS17175 PF12390 M478_RS17175 M478_RS17180 PF00009 Elongation factor Tu GTP binding domain M478_RS17180 PF09106 Elongation factor SelB, winged helix M478_RS17180 PF09107 Elongation factor SelB, winged helix M478_RS17185 PF01526 M478_RS17185 M478_RS17195 PF13988 M478_RS17195 M478_RS17210 PF07690 Major Facilitator Superfamily M478_RS17215 PF00665 Integrase core domain M478_RS17215 PF13276 M478_RS17215 M478_RS17220 PF13518 Helix-turn-helix domain M478_RS17230 PF01757 M478_RS17230 M478_RS17235 PF00419 Fimbrial protein M478_RS17245 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M478_RS17245 PF02753 Pili assembly chaperone PapD, C-terminal domain M478_RS17250 PF00419 Fimbrial protein M478_RS17255 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M478_RS17255 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M478_RS17265 PF13407 Periplasmic binding protein domain M478_RS17270 PF00005 ABC transporter M478_RS17275 PF02653 M478_RS17275 M478_RS17280 PF12833 Helix-turn-helix domain M478_RS17280 PF13377 Periplasmic binding protein-like domain M478_RS17285 PF00589 Phage integrase family M478_RS17285 PF13356 Domain of unknown function (DUF4102) M478_RS17295 PF04606 M478_RS17295 M478_RS17305 PF01609 Transposase DDE domain M478_RS17310 PF01381 Helix-turn-helix M478_RS17320 PF13310 M478_RS17320 M478_RS17325 PF00005 ABC transporter M478_RS17330 PF01032 FecCD transport family M478_RS17335 PF01032 FecCD transport family M478_RS17340 PF01497 Periplasmic binding protein M478_RS17345 PF13535 ATP-grasp domain M478_RS17350 PF00892 EamA-like transporter family M478_RS17355 PF00156 Phosphoribosyl transferase domain M478_RS17360 PF00291 Pyridoxal-phosphate dependent enzyme M478_RS17365 PF01175 Urocanase M478_RS17370 PF00221 Aromatic amino acid lyase M478_RS17375 PF00324 Amino acid permease M478_RS17380 PF12146 Putative lysophospholipase M478_RS17385 PF00884 Sulfatase M478_RS17385 PF08019 M478_RS17385 M478_RS17390 PF00072 Response regulator receiver domain M478_RS17390 PF00196 Bacterial regulatory proteins, luxR family M478_RS17395 PF05231 M478_RS17395 M478_RS17400 PF00665 Integrase core domain M478_RS17400 PF02796 Helix-turn-helix domain of resolvase M478_RS17405 PF01695 IstB-like ATP binding protein M478_RS17410 PF00132 Bacterial transferase hexapeptide (six repeats) M478_RS17415 PF01488 Shikimate / quinate 5-dehydrogenase M478_RS17415 PF08501 Shikimate dehydrogenase substrate binding domain M478_RS17420 PF01300 Telomere recombination M478_RS17425 PF01396 M478_RS17425 M478_RS17430 PF04361 M478_RS17430 M478_RS17435 PF02481 DNA recombination-mediator protein A M478_RS17440 PF01327 Polypeptide deformylase M478_RS17445 PF00551 Formyl transferase M478_RS17445 PF02911 Formyl transferase, C-terminal domain M478_RS17450 PF01029 NusB family M478_RS17450 PF01189 NOL1/NOP2/sun family M478_RS17455 PF02080 TrkA-C domain M478_RS17455 PF02254 TrkA-N domain M478_RS17460 PF01741 Large-conductance mechanosensitive channel, MscL M478_RS17465 PF03889 M478_RS17465 M478_RS17470 PF13411 MerR HTH family regulatory protein M478_RS17475 PF01196 Ribosomal protein L17 M478_RS17480 PF01000 RNA polymerase Rpb3/RpoA insert domain M478_RS17480 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain M478_RS17480 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain M478_RS17485 PF00163 Ribosomal protein S4/S9 N-terminal domain M478_RS17485 PF01479 S4 domain M478_RS17490 PF00411 Ribosomal protein S11 M478_RS17495 PF00416 Ribosomal protein S13/S18 M478_RS17500 PF00444 Ribosomal protein L36 M478_RS17505 PF00344 SecY translocase M478_RS17510 PF00828 Ribosomal protein L18e/L15 M478_RS17515 PF00327 Ribosomal protein L30p/L7e M478_RS17520 PF00333 Ribosomal protein S5, N-terminal domain M478_RS17520 PF03719 Ribosomal protein S5, C-terminal domain M478_RS17525 PF00861 Ribosomal L18p/L5e family M478_RS17530 PF00347 Ribosomal protein L6 M478_RS17535 PF00410 Ribosomal protein S8 M478_RS17540 PF00253 Ribosomal protein S14p/S29e M478_RS17545 PF00281 Ribosomal protein L5 M478_RS17545 PF00673 ribosomal L5P family C-terminus M478_RS17550 PF00467 KOW motif M478_RS17550 PF17136 M478_RS17550 M478_RS17555 PF00238 Ribosomal protein L14p/L23e M478_RS17560 PF00366 Ribosomal protein S17 M478_RS17565 PF00831 Ribosomal L29 protein M478_RS17570 PF00252 Ribosomal protein L16p/L10e M478_RS17575 PF00189 Ribosomal protein S3, C-terminal domain M478_RS17575 PF07650 KH domain M478_RS17580 PF00237 Ribosomal protein L22p/L17e M478_RS17585 PF00203 Ribosomal protein S19 M478_RS17590 PF00181 Ribosomal Proteins L2, RNA binding domain M478_RS17590 PF03947 Ribosomal Proteins L2, C-terminal domain M478_RS17595 PF00276 Ribosomal protein L23 M478_RS17600 PF00573 Ribosomal protein L4/L1 family M478_RS17605 PF00297 Ribosomal protein L3 M478_RS17610 PF00338 Ribosomal protein S10p/S20e M478_RS17615 PF00210 Ferritin-like domain M478_RS17620 PF04324 BFD-like [2Fe-2S] binding domain M478_RS17625 PF01797 Transposase IS200 like M478_RS17630 PF00009 Elongation factor Tu GTP binding domain M478_RS17630 PF03143 Elongation factor Tu C-terminal domain M478_RS17630 PF03144 Elongation factor Tu domain 2 M478_RS17635 PF00009 Elongation factor Tu GTP binding domain M478_RS17635 PF00679 Elongation factor G C-terminus M478_RS17635 PF03144 Elongation factor Tu domain 2 M478_RS17635 PF03764 Elongation factor G, domain IV M478_RS17635 PF14492 Elongation Factor G, domain II M478_RS17640 PF00177 Ribosomal protein S7p/S5e M478_RS17645 PF00164 Ribosomal protein S12/S23 M478_RS17650 PF04077 DsrH like protein M478_RS17655 PF02635 DsrE/DsrF-like family M478_RS17660 PF02635 DsrE/DsrF-like family M478_RS17665 PF08348 M478_RS17665 M478_RS17665 PF13309 M478_RS17665 M478_RS17670 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M478_RS17670 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M478_RS17675 PF04102 SlyX M478_RS17680 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M478_RS17685 PF09526 M478_RS17685 M478_RS17690 PF00999 Sodium/hydrogen exchanger family M478_RS17690 PF02254 TrkA-N domain M478_RS17695 PF02525 Flavodoxin-like fold M478_RS17705 PF00535 Glycosyl transferase family 2 M478_RS17710 PF01075 Glycosyltransferase family 9 (heptosyltransferase) M478_RS17715 PF02668 Taurine catabolism dioxygenase TauD, TfdA family M478_RS17720 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS17725 PF00005 ABC transporter M478_RS17730 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M478_RS17735 PF01810 M478_RS17735 M478_RS17740 PF00561 alpha/beta hydrolase fold M478_RS17745 PF06794 Uncharacterised protein family (UPF0270) M478_RS17750 PF00485 Phosphoribulokinase / Uridine kinase family M478_RS17755 PF06836 M478_RS17755 M478_RS17760 PF02566 OsmC-like protein M478_RS17765 PF00027 Cyclic nucleotide-binding domain M478_RS17765 PF00325 Bacterial regulatory proteins, crp family M478_RS17770 PF12805 M478_RS17770 M478_RS17770 PF13515 M478_RS17770 M478_RS17775 PF00202 Aminotransferase class-III M478_RS17780 PF00117 Glutamine amidotransferase class-I M478_RS17785 PF05872 M478_RS17785 M478_RS17790 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M478_RS17795 PF02056 Family 4 glycosyl hydrolase M478_RS17795 PF11975 Family 4 glycosyl hydrolase C-terminal domain M478_RS17800 PF00356 Bacterial regulatory proteins, lacI family M478_RS17800 PF13377 Periplasmic binding protein-like domain M478_RS17805 PF00593 TonB dependent receptor M478_RS17805 PF07715 TonB-dependent Receptor Plug Domain M478_RS17810 PF07690 Major Facilitator Superfamily M478_RS17815 PF07969 Amidohydrolase family M478_RS17820 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M478_RS17820 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M478_RS17820 PF04324 BFD-like [2Fe-2S] binding domain M478_RS17820 PF07992 Pyridine nucleotide-disulphide oxidoreductase M478_RS17825 PF13806 Rieske-like [2Fe-2S] domain M478_RS17830 PF01226 Formate/nitrite transporter M478_RS17835 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M478_RS17835 PF10414 Sirohaem synthase dimerisation region M478_RS17835 PF13241 Putative NAD(P)-binding M478_RS17835 PF14824 Sirohaem biosynthesis protein central M478_RS17840 PF00579 tRNA synthetases class I (W and Y) M478_RS17845 PF13419 Haloacid dehalogenase-like hydrolase M478_RS17850 PF00834 Ribulose-phosphate 3 epimerase family M478_RS17855 PF02086 D12 class N6 adenine-specific DNA methyltransferase M478_RS17860 PF05036 Sporulation related domain M478_RS17865 PF01761 3-dehydroquinate synthase M478_RS17870 PF01202 Shikimate kinase M478_RS17875 PF00263 M478_RS17875 M478_RS17875 PF03958 Bacterial type II/III secretion system short domain M478_RS17885 PF10748 M478_RS17885 M478_RS17895 PF05137 M478_RS17895 M478_RS17900 PF11104 Type IV pilus assembly protein PilM; M478_RS17905 PF00905 Penicillin binding protein transpeptidase domain M478_RS17905 PF00912 Transglycosylase M478_RS17905 PF17092 M478_RS17905 M478_RS17910 PF00293 NUDIX domain M478_RS17920 PF07095 Intracellular growth attenuator protein IgaA M478_RS17925 PF13419 Haloacid dehalogenase-like hydrolase M478_RS17930 PF01479 S4 domain M478_RS17935 PF01430 Hsp33 protein M478_RS17940 PF01293 Phosphoenolpyruvate carboxykinase M478_RS17945 PF00512 His Kinase A (phospho-acceptor) domain M478_RS17945 PF00672 HAMP domain M478_RS17945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M478_RS17950 PF00072 Response regulator receiver domain M478_RS17950 PF00486 Transcriptional regulatory protein, C terminal M478_RS17955 PF01272 Transcription elongation factor, GreA/GreB, C-term M478_RS17955 PF03449 Transcription elongation factor, N-terminal M478_RS17960 PF00575 S1 RNA binding domain M478_RS17960 PF09371 Tex-like protein N-terminal domain M478_RS17960 PF12836 Helix-hairpin-helix motif M478_RS17960 PF16921 M478_RS17960 M478_RS17970 PF04023 FeoA domain M478_RS17975 PF02421 Ferrous iron transport protein B M478_RS17975 PF07664 M478_RS17975 M478_RS17975 PF07670 Nucleoside recognition M478_RS17980 PF09012 FeoC like transcriptional regulator M478_RS17985 PF07338 Protein of unknown function (DUF1471) M478_RS17990 PF00561 alpha/beta hydrolase fold M478_RS17995 PF00156 Phosphoribosyl transferase domain M478_RS18000 PF01106 NifU-like domain M478_RS18000 PF01521 Iron-sulphur cluster biosynthesis M478_RS18005 PF02446 4-alpha-glucanotransferase M478_RS18010 PF00343 Carbohydrate phosphorylase M478_RS18020 PF00196 Bacterial regulatory proteins, luxR family M478_RS18025 PF00581 Rhodanese-like domain M478_RS18030 PF01694 Rhomboid family M478_RS18030 PF12122 Protein of unknown function (DUF3582) M478_RS18035 PF00455 M478_RS18035 M478_RS18035 PF08220 DeoR-like helix-turn-helix domain M478_RS18040 PF13518 Helix-turn-helix domain M478_RS18045 PF00665 Integrase core domain M478_RS18045 PF13276 M478_RS18045 M478_RS18055 PF06092 M478_RS18055 M478_RS18065 PF01266 FAD dependent oxidoreductase M478_RS18065 PF16901 M478_RS18065 M478_RS18070 PF00343 Carbohydrate phosphorylase M478_RS18075 PF00534 Glycosyl transferases group 1 M478_RS18075 PF08323 Starch synthase catalytic domain M478_RS18080 PF00483 Nucleotidyl transferase M478_RS18085 PF00128 Alpha amylase, catalytic domain M478_RS18085 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) M478_RS18090 PF00128 Alpha amylase, catalytic domain M478_RS18090 PF02806 Alpha amylase, C-terminal all-beta domain M478_RS18090 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) M478_RS18095 PF06580 M478_RS18095 M478_RS18095 PF07694 5TMR of 5TMR-LYT M478_RS18100 PF01476 LysM domain M478_RS18100 PF02369 Bacterial Ig-like domain (group 1) M478_RS18100 PF11924 Protein of unknown function (DUF3442) M478_RS18125 PF01118 Semialdehyde dehydrogenase, NAD binding domain M478_RS18125 PF02774 Semialdehyde dehydrogenase, dimerisation domain M478_RS18130 PF01914 M478_RS18130 M478_RS18150 PF01202 Shikimate kinase M478_RS18155 PF02447 M478_RS18155 M478_RS18160 PF00356 Bacterial regulatory proteins, lacI family M478_RS18160 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family M478_RS18165 PF02678 Pirin M478_RS18175 PF00072 Response regulator receiver domain M478_RS18175 PF00486 Transcriptional regulatory protein, C terminal M478_RS18180 PF00294 pfkB family carbohydrate kinase M478_RS18185 PF01116 Fructose-bisphosphate aldolase class-II M478_RS18190 PF07385 Protein of unknown function (DUF1498) M478_RS18195 PF13407 Periplasmic binding protein domain M478_RS18200 PF02653 M478_RS18200 M478_RS18205 PF00005 ABC transporter M478_RS18210 PF00072 Response regulator receiver domain M478_RS18210 PF00512 His Kinase A (phospho-acceptor) domain M478_RS18210 PF00672 HAMP domain M478_RS18210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M478_RS18210 PF12860 M478_RS18210 M478_RS18215 PF03486 HI0933-like protein M478_RS18220 PF01384 M478_RS18220 M478_RS18230 PF01797 Transposase IS200 like M478_RS18235 PF10625 M478_RS18235 M478_RS18240 PF00582 Universal stress protein family M478_RS18245 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M478_RS18245 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M478_RS18250 PF08548 Peptidase M10 serralysin C terminal M478_RS18255 PF04445 Putative SAM-dependent methyltransferase M478_RS18260 PF01432 Peptidase family M3 M478_RS18265 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ M478_RS18270 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M478_RS18270 PF07992 Pyridine nucleotide-disulphide oxidoreductase M478_RS18275 PF05651 M478_RS18275 M478_RS18275 PF13556 PucR C-terminal helix-turn-helix domain M478_RS18280 PF02447 M478_RS18280 M478_RS18285 PF02595 Glycerate kinase family M478_RS18290 PF06092 M478_RS18290 M478_RS18295 PF06092 M478_RS18295 M478_RS18300 PF11692 M478_RS18300 M478_RS18305 PF03212 Pertactin M478_RS18305 PF03797 Autotransporter beta-domain M478_RS18310 PF03631 M478_RS18310 M478_RS18315 PF02611 CDP-diacylglycerol pyrophosphatase M478_RS18320 PF05170 M478_RS18320 M478_RS18325 PF00563 EAL domain M478_RS18330 PF01361 Tautomerase enzyme M478_RS18335 PF00294 pfkB family carbohydrate kinase M478_RS18340 PF00675 Insulinase (Peptidase family M16) M478_RS18340 PF05193 Peptidase M16 inactive domain M478_RS18345 PF00375 Sodium:dicarboxylate symporter family M478_RS18350 PF00754 F5/8 type C domain M478_RS18355 PF06917 Periplasmic pectate lyase M478_RS18360 PF06178 Oligogalacturonate-specific porin protein (KdgM) M478_RS18365 PF00563 EAL domain M478_RS18365 PF00672 HAMP domain M478_RS18365 PF00990 GGDEF domain M478_RS18365 PF17154 M478_RS18365 M478_RS18370 PF01270 Glycosyl hydrolases family 8 M478_RS18375 PF00005 ABC transporter M478_RS18375 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M478_RS18380 PF00005 ABC transporter M478_RS18380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M478_RS18385 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS18385 PF12911 M478_RS18385 M478_RS18390 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS18395 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M478_RS18405 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB M478_RS18405 PF08479 POTRA domain, ShlB-type M478_RS18410 PF05860 haemagglutination activity domain M478_RS18420 PF07690 Major Facilitator Superfamily M478_RS18425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M478_RS18425 PF07730 Histidine kinase M478_RS18445 PF02796 Helix-turn-helix domain of resolvase M478_RS18450 PF12715 Abhydrolase family M478_RS18455 PF00474 Sodium:solute symporter family M478_RS18460 PF04341 M478_RS18460 M478_RS18465 PF00501 AMP-binding enzyme M478_RS18465 PF13193 AMP-binding enzyme C-terminal domain M478_RS18465 PF16177 M478_RS18465 M478_RS18470 PF00375 Sodium:dicarboxylate symporter family M478_RS18475 PF00072 Response regulator receiver domain M478_RS18475 PF00196 Bacterial regulatory proteins, luxR family M478_RS18480 PF00072 Response regulator receiver domain M478_RS18480 PF00512 His Kinase A (phospho-acceptor) domain M478_RS18480 PF01627 Hpt domain M478_RS18480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M478_RS18485 PF00263 M478_RS18485 M478_RS18485 PF03958 Bacterial type II/III secretion system short domain M478_RS18490 PF16693 M478_RS18490 M478_RS18495 PF08988 Protein of unknown function (DUF1895) M478_RS18500 PF12833 Helix-turn-helix domain M478_RS18505 PF09392 Type III secretion needle MxiH like M478_RS18510 PF06287 M478_RS18510 M478_RS18525 PF13327 M478_RS18525 M478_RS18530 PF06188 M478_RS18530 M478_RS18535 PF00771 FHIPEP family M478_RS18540 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M478_RS18540 PF02874 ATP synthase alpha/beta family, beta-barrel domain M478_RS18555 PF01052 Surface presentation of antigens (SPOA) M478_RS18560 PF00813 M478_RS18560 M478_RS18565 PF01313 M478_RS18565 M478_RS18570 PF01311 M478_RS18570 M478_RS18575 PF01312 FlhB HrpN YscU SpaS Family M478_RS18580 PF04143 M478_RS18580 M478_RS18585 PF01206 Sulfurtransferase TusA M478_RS18590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M478_RS18590 PF03466 LysR substrate binding domain M478_RS18600 PF01053 Cys/Met metabolism PLP-dependent enzyme M478_RS18605 PF00005 ABC transporter M478_RS18610 PF01032 FecCD transport family M478_RS18615 PF01497 Periplasmic binding protein M478_RS18620 PF05171 Haemin-degrading HemS M478_RS18625 PF00593 TonB dependent receptor M478_RS18625 PF07715 TonB-dependent Receptor Plug Domain M478_RS18630 PF13460 NADH(P)-binding M478_RS18635 PF06228 Haem utilisation ChuX/HutX M478_RS18640 PF04055 Radical SAM superfamily M478_RS18645 PF02219 Methylenetetrahydrofolate reductase M478_RS18655 PF15617 M478_RS18655 M478_RS18660 PF11202 M478_RS18660 M478_RS18660 PF15608 M478_RS18660 M478_RS18670 PF12500 M478_RS18670 M478_RS18670 PF15609 M478_RS18670 M478_RS18675 PF15632 M478_RS18675 M478_RS18680 PF02342 TerD domain M478_RS18685 PF02342 TerD domain M478_RS18690 PF05099 Tellurite resistance protein TerB M478_RS18695 PF03741 M478_RS18695 M478_RS18700 PF02342 TerD domain M478_RS18705 PF02342 TerD domain M478_RS18710 PF06551 M478_RS18710 M478_RS18715 PF00577 Outer membrane usher protein M478_RS18715 PF13953 PapC C-terminal domain M478_RS18715 PF13954 PapC N-terminal domain M478_RS18720 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain M478_RS18740 PF01565 FAD binding domain M478_RS18740 PF08031 Berberine and berberine like M478_RS18745 PF03797 Autotransporter beta-domain M478_RS18750 PF04345 Chorismate lyase M478_RS18755 PF01040 UbiA prenyltransferase family M478_RS18760 PF01553 Acyltransferase M478_RS18765 PF01219 Prokaryotic diacylglycerol kinase M478_RS18770 PF00717 Peptidase S24-like M478_RS18770 PF01726 LexA DNA binding domain M478_RS18775 PF01475 Ferric uptake regulator family M478_RS18780 PF01207 Dihydrouridine synthase (Dus) M478_RS18785 PF09583 M478_RS18785 M478_RS18790 PF00107 Zinc-binding dehydrogenase M478_RS18790 PF08240 Alcohol dehydrogenase GroES-like domain M478_RS18795 PF00772 DnaB-like helicase N terminal domain M478_RS18795 PF03796 DnaB-like helicase C terminal domain M478_RS18800 PF00842 Alanine racemase, C-terminal domain M478_RS18800 PF01168 Alanine racemase, N-terminal domain M478_RS18805 PF00155 Aminotransferase class I and II M478_RS18810 PF04237 YjbR M478_RS18815 PF00005 ABC transporter M478_RS18820 PF00436 Single-strand binding protein family M478_RS18825 PF05336 Domain of unknown function (DUF718) M478_RS18830 PF00465 Iron-containing alcohol dehydrogenase M478_RS18835 PF00596 Class II Aldolase and Adducin N-terminal domain M478_RS18840 PF06134 L-rhamnose isomerase (RhaA) M478_RS18845 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M478_RS18845 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M478_RS18860 PF02311 AraC-like ligand binding domain M478_RS18860 PF12833 Helix-turn-helix domain M478_RS18865 PF02311 AraC-like ligand binding domain M478_RS18865 PF12833 Helix-turn-helix domain M478_RS18870 PF06379 M478_RS18870 M478_RS18890 PF03272 M478_RS18890 M478_RS18890 PF13402 Peptidase M60-like family M478_RS18900 PF00440 Bacterial regulatory proteins, tetR family M478_RS18905 PF07992 Pyridine nucleotide-disulphide oxidoreductase M478_RS18905 PF13247 4Fe-4S dicluster domain M478_RS18905 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster M478_RS18910 PF12800 4Fe-4S binding domain M478_RS18910 PF13187 4Fe-4S dicluster domain M478_RS18915 PF00384 Molybdopterin oxidoreductase M478_RS18915 PF01568 Molydopterin dinucleotide binding domain M478_RS18915 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M478_RS18920 PF02683 M478_RS18920 M478_RS18920 PF11412 Disulphide bond corrector protein DsbC M478_RS18920 PF13899 Thioredoxin-like M478_RS18925 PF03091 CutA1 divalent ion tolerance protein M478_RS18930 PF03605 M478_RS18930 M478_RS18940 PF04186 M478_RS18940 M478_RS18945 PF00166 Chaperonin 10 Kd subunit M478_RS18950 PF00118 TCP-1/cpn60 chaperonin family M478_RS18955 PF13698 M478_RS18955 M478_RS18960 PF04055 Radical SAM superfamily M478_RS18960 PF13353 4Fe-4S single cluster domain M478_RS18965 PF01132 Elongation factor P (EF-P) OB domain M478_RS18965 PF08207 Elongation factor P (EF-P) KOW-like domain M478_RS18965 PF09285 Elongation factor P, C-terminal M478_RS18970 PF00893 Small Multidrug Resistance protein M478_RS18975 PF02313 Fumarate reductase subunit D M478_RS18980 PF02300 Fumarate reductase subunit C M478_RS18985 PF13085 2Fe-2S iron-sulfur cluster binding domain M478_RS18985 PF13183 4Fe-4S dicluster domain M478_RS18990 PF00890 FAD binding domain M478_RS18990 PF02910 Fumarate reductase flavoprotein C-term M478_RS19000 PF00152 tRNA synthetases class II (D, K and N) M478_RS19005 PF00924 Mechanosensitive ion channel M478_RS19005 PF12794 M478_RS19005 M478_RS19005 PF12795 M478_RS19005 M478_RS19010 PF02666 M478_RS19010 M478_RS19015 PF03193 Protein of unknown function, DUF258 M478_RS19025 PF00929 Exonuclease M478_RS19040 PF08331 M478_RS19040 M478_RS19040 PF13484 M478_RS19040 M478_RS19045 PF01256 Carbohydrate kinase M478_RS19045 PF03853 YjeF-related protein N-terminus M478_RS19050 PF02367 Uncharacterised P-loop hydrolase UPF0079 M478_RS19055 PF01476 LysM domain M478_RS19055 PF01520 N-acetylmuramoyl-L-alanine amidase M478_RS19055 PF11741 AMIN domain M478_RS19060 PF01119 DNA mismatch repair protein, C-terminal domain M478_RS19060 PF08676 MutL C terminal dimerisation domain M478_RS19060 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M478_RS19065 PF01715 IPP transferase M478_RS19075 PF01926 50S ribosome-binding GTPase M478_RS19075 PF13167 M478_RS19075 M478_RS19075 PF16360 M478_RS19075 M478_RS19080 PF01145 SPFH domain / Band 7 family M478_RS19080 PF12221 M478_RS19080 M478_RS19085 PF01145 SPFH domain / Band 7 family M478_RS19090 PF09838 M478_RS19090 M478_RS19095 PF00709 Adenylosuccinate synthetase M478_RS19100 PF02082 Transcriptional regulator M478_RS19105 PF00575 S1 RNA binding domain M478_RS19105 PF00773 RNB domain M478_RS19105 PF08206 Ribonuclease B OB domain M478_RS19105 PF08461 Ribonuclease R winged-helix domain M478_RS19110 PF00588 SpoU rRNA Methylase family M478_RS19110 PF08032 RNA 2'-O ribose methyltransferase substrate binding M478_RS19115 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M478_RS19115 PF02770 Acyl-CoA dehydrogenase, middle domain M478_RS19120 PF07338 Protein of unknown function (DUF1471) M478_RS19130 PF01695 IstB-like ATP binding protein M478_RS19135 PF00665 Integrase core domain M478_RS19135 PF02796 Helix-turn-helix domain of resolvase M478_RS19140 PF00326 Prolyl oligopeptidase family M478_RS19150 PF01250 Ribosomal protein S6 M478_RS19155 PF00436 Single-strand binding protein family M478_RS19160 PF01084 Ribosomal protein S18 M478_RS19165 PF01281 Ribosomal protein L9, N-terminal domain M478_RS19165 PF03948 Ribosomal protein L9, C-terminal domain M478_RS19175 PF01797 Transposase IS200 like M478_RS19180 PF12582 M478_RS19180 M478_RS19185 PF04225 Opacity-associated protein A LysM-like domain M478_RS19185 PF08525 M478_RS19185 M478_RS19190 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M478_RS19190 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M478_RS19195 PF01814 Hemerythrin HHE cation binding domain M478_RS19195 PF04405 M478_RS19195 M478_RS19200 PF00149 Calcineurin-like phosphoesterase M478_RS19200 PF02872 5'-nucleotidase, C-terminal domain M478_RS19205 PF00459 Inositol monophosphatase family M478_RS19210 PF09695 M478_RS19210 M478_RS19215 PF06526 Protein of unknown function (DUF1107) M478_RS19220 PF00571 CBS domain M478_RS19220 PF01595 M478_RS19220 M478_RS19220 PF03471 Transporter associated domain M478_RS19225 PF01625 Peptide methionine sulfoxide reductase M478_RS19230 PF01103 Surface antigen M478_RS19230 PF07244 Surface antigen variable number repeat M478_RS19235 PF04357 M478_RS19235 M478_RS19240 PF06094 AIG2-like family M478_RS19245 PF00719 Inorganic pyrophosphatase M478_RS19250 PF00316 Fructose-1-6-bisphosphatase M478_RS19255 PF01225 Mur ligase family, catalytic domain M478_RS19255 PF02875 Mur ligase family, glutamate ligase domain M478_RS19255 PF08245 Mur ligase middle domain M478_RS19265 PF07338 Protein of unknown function (DUF1471) M478_RS19270 PF01316 Arginine repressor, DNA binding domain M478_RS19270 PF02863 Arginine repressor, C-terminal domain M478_RS19275 PF00056 lactate/malate dehydrogenase, NAD binding domain M478_RS19275 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain M478_RS19280 PF13693 Winged helix-turn-helix DNA-binding M478_RS19285 PF02316 Mu DNA-binding domain M478_RS19290 PF00348 Polyprenyl synthetase M478_RS19295 PF00829 Ribosomal prokaryotic L21 protein M478_RS19300 PF01016 Ribosomal L27 protein M478_RS19305 PF00892 EamA-like transporter family M478_RS19310 PF01018 GTP1/OBG M478_RS19310 PF01926 50S ribosome-binding GTPase M478_RS19315 PF00512 His Kinase A (phospho-acceptor) domain M478_RS19315 PF00672 HAMP domain M478_RS19315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M478_RS19320 PF00072 Response regulator receiver domain M478_RS19320 PF00486 Transcriptional regulatory protein, C terminal M478_RS19325 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family M478_RS19330 PF01272 Transcription elongation factor, GreA/GreB, C-term M478_RS19330 PF03449 Transcription elongation factor, N-terminal M478_RS19335 PF01985 CRS1 / YhbY (CRM) domain M478_RS19340 PF01728 FtsJ-like methyltransferase M478_RS19345 PF00004 ATPase family associated with various cellular activities (AAA) M478_RS19345 PF01434 Peptidase family M41 M478_RS19345 PF06480 FtsH Extracellular M478_RS19350 PF00809 Pterin binding enzyme M478_RS19355 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M478_RS19355 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M478_RS19355 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M478_RS19355 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M478_RS19360 PF03840 Preprotein translocase SecG subunit M478_RS19375 PF02576 Uncharacterised BCR, YhbC family COG0779 M478_RS19380 PF08529 NusA N-terminal domain M478_RS19380 PF13184 NusA-like KH domain M478_RS19380 PF14520 Helix-hairpin-helix domain M478_RS19385 PF00009 Elongation factor Tu GTP binding domain M478_RS19385 PF03144 Elongation factor Tu domain 2 M478_RS19385 PF04760 Translation initiation factor IF-2, N-terminal region M478_RS19385 PF08364 M478_RS19385 M478_RS19385 PF11987 Translation-initiation factor 2 M478_RS19390 PF02033 Ribosome-binding factor A M478_RS19395 PF01509 TruB family pseudouridylate synthase (N terminal domain) M478_RS19395 PF09157 Pseudouridine synthase II TruB, C-terminal M478_RS19395 PF16198 M478_RS19395 M478_RS19400 PF00312 Ribosomal protein S15 M478_RS19405 PF13518 Helix-turn-helix domain M478_RS19410 PF00665 Integrase core domain M478_RS19410 PF13276 M478_RS19410 M478_RS19415 PF00013 KH domain M478_RS19415 PF00575 S1 RNA binding domain M478_RS19415 PF01138 3' exoribonuclease family, domain 1 M478_RS19415 PF03725 3' exoribonuclease family, domain 2 M478_RS19415 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain M478_RS19420 PF07719 Tetratricopeptide repeat M478_RS19420 PF13181 Tetratricopeptide repeat M478_RS19425 PF00270 DEAD/DEAH box helicase M478_RS19425 PF00271 Helicase conserved C-terminal domain M478_RS19425 PF03880 DbpA RNA binding domain M478_RS19425 PF12343 M478_RS19425 M478_RS19435 PF05973 M478_RS19435 M478_RS19440 PF01381 Helix-turn-helix M478_RS19445 PF00296 Luciferase-like monooxygenase M478_RS19450 PF16576 M478_RS19450 M478_RS19455 PF00873 AcrB/AcrD/AcrF family M478_RS19460 PF02321 Outer membrane efflux protein M478_RS19465 PF01136 M478_RS19465 M478_RS19470 PF01136 M478_RS19470 M478_RS19480 PF02036 SCP-2 sterol transfer family M478_RS19485 PF00583 Acetyltransferase (GNAT) family M478_RS19495 PF05426 Alginate lyase M478_RS19495 PF07940 Heparinase II/III-like protein M478_RS19500 PF05426 Alginate lyase M478_RS19505 PF01547 Bacterial extracellular solute-binding protein M478_RS19510 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS19515 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS19520 PF00005 ABC transporter M478_RS19520 PF08402 TOBE domain M478_RS19525 PF05426 Alginate lyase M478_RS19540 PF12706 Beta-lactamase superfamily domain M478_RS19545 PF13238 AAA domain M478_RS19550 PF07969 Amidohydrolase family M478_RS19555 PF00005 ABC transporter M478_RS19560 PF00005 ABC transporter M478_RS19565 PF06007 M478_RS19565 M478_RS19570 PF05861 M478_RS19570 M478_RS19575 PF05845 Bacterial phosphonate metabolism protein (PhnH) M478_RS19580 PF06754 M478_RS19580 M478_RS19585 PF00392 Bacterial regulatory proteins, gntR family M478_RS19585 PF07702 UTRA domain M478_RS19590 PF13353 4Fe-4S single cluster domain M478_RS19595 PF03477 ATP cone domain M478_RS19595 PF13597 Anaerobic ribonucleoside-triphosphate reductase M478_RS19600 PF00005 ABC transporter M478_RS19605 PF00005 ABC transporter M478_RS19610 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS19610 PF12911 M478_RS19610 M478_RS19615 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS19625 PF04074 Domain of unknown function (DUF386) M478_RS19630 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M478_RS19630 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M478_RS19635 PF06877 Regulator of ribonuclease activity B M478_RS19640 PF00583 Acetyltransferase (GNAT) family M478_RS19645 PF00133 tRNA synthetases class I (I, L, M and V) M478_RS19645 PF08264 Anticodon-binding domain of tRNA M478_RS19645 PF10458 Valyl tRNA synthetase tRNA binding arm M478_RS19650 PF04364 DNA polymerase III chi subunit, HolC M478_RS19655 PF00883 Cytosol aminopeptidase family, catalytic domain M478_RS19655 PF02789 Cytosol aminopeptidase family, N-terminal domain M478_RS19660 PF03739 M478_RS19660 M478_RS19665 PF03739 M478_RS19665 M478_RS19675 PF00589 Phage integrase family M478_RS19675 PF13356 Domain of unknown function (DUF4102) M478_RS19680 PF03235 M478_RS19680 M478_RS19680 PF07510 M478_RS19680 M478_RS19685 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M478_RS19690 PF01695 IstB-like ATP binding protein M478_RS19695 PF00665 Integrase core domain M478_RS19695 PF02796 Helix-turn-helix domain of resolvase M478_RS19700 PF01797 Transposase IS200 like M478_RS19705 PF03884 Domain of unknown function (DUF329) M478_RS19710 PF07072 Protein of unknown function (DUF1342) M478_RS19715 PF01121 Dephospho-CoA kinase M478_RS19725 PF00478 IMP dehydrogenase / GMP reductase domain M478_RS19730 PF00482 Type II secretion system (T2SS), protein F M478_RS19735 PF00437 Type II/IV secretion system protein M478_RS19740 PF13633 Prokaryotic N-terminal methylation site M478_RS19745 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain M478_RS19745 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain M478_RS19750 PF01510 N-acetylmuramoyl-L-alanine amidase M478_RS19755 PF17113 M478_RS19755 M478_RS19760 PF00324 Amino acid permease M478_RS19765 PF00392 Bacterial regulatory proteins, gntR family M478_RS19765 PF07729 FCD domain M478_RS19770 PF00456 Transketolase, thiamine diphosphate binding domain M478_RS19775 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M478_RS19775 PF00364 Biotin-requiring enzyme M478_RS19775 PF02817 e3 binding domain M478_RS19780 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M478_RS19780 PF07992 Pyridine nucleotide-disulphide oxidoreductase M478_RS19790 PF01797 Transposase IS200 like M478_RS19795 PF00330 Aconitase family (aconitate hydratase) M478_RS19795 PF06434 Aconitate hydratase 2 N-terminus M478_RS19795 PF11791 Aconitate B N-terminal domain M478_RS19800 PF06062 M478_RS19800 M478_RS19805 PF00892 EamA-like transporter family M478_RS19810 PF02675 S-adenosylmethionine decarboxylase M478_RS19815 PF01564 Spermine/spermidine synthase M478_RS19820 PF09691 Bacterial chaperone lipoprotein (PulS_OutS) M478_RS19825 PF00394 Multicopper oxidase M478_RS19825 PF07731 Multicopper oxidase M478_RS19825 PF07732 Multicopper oxidase M478_RS19825 PF10518 TAT (twin-arginine translocation) pathway signal sequence M478_RS19830 PF00156 Phosphoribosyl transferase domain M478_RS19835 PF00484 Carbonic anhydrase M478_RS19840 PF00005 ABC transporter M478_RS19845 PF01061 M478_RS19845 M478_RS19855 PF02261 Aspartate decarboxylase M478_RS19860 PF02569 Pantoate-beta-alanine ligase M478_RS19865 PF02548 Ketopantoate hydroxymethyltransferase M478_RS19870 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) M478_RS19875 PF01743 Poly A polymerase head domain M478_RS19875 PF12626 Polymerase A arginine-rich C-terminus M478_RS19875 PF12627 Probable RNA and SrmB- binding site of polymerase A M478_RS19880 PF00749 tRNA synthetases class I (E and Q), catalytic domain M478_RS19885 PF01258 Prokaryotic dksA/traR C4-type zinc finger M478_RS19890 PF03749 Sugar fermentation stimulation protein M478_RS19895 PF02834 LigT like Phosphoesterase M478_RS19900 PF00270 DEAD/DEAH box helicase M478_RS19900 PF00271 Helicase conserved C-terminal domain M478_RS19900 PF04408 Helicase associated domain (HA2) M478_RS19900 PF08482 M478_RS19900 M478_RS19905 PF00905 Penicillin binding protein transpeptidase domain M478_RS19905 PF00912 Transglycosylase M478_RS19905 PF14812 M478_RS19905 M478_RS19905 PF14814 Bifunctional transglycosylase second domain M478_RS19910 PF00005 ABC transporter M478_RS19915 PF01497 Periplasmic binding protein M478_RS19920 PF01032 FecCD transport family M478_RS19925 PF00202 Aminotransferase class-III M478_RS19930 PF00654 Voltage gated chloride channel M478_RS19935 PF01521 Iron-sulphur cluster biosynthesis M478_RS19940 PF03458 M478_RS19940 M478_RS19945 PF01497 Periplasmic binding protein M478_RS19950 PF01048 Phosphorylase superfamily M478_RS19955 PF01966 HD domain M478_RS19955 PF13286 Phosphohydrolase-associated domain M478_RS19960 PF00595 PDZ domain (Also known as DHR or GLGF) M478_RS19960 PF13180 PDZ domain M478_RS19960 PF13365 Trypsin-like peptidase domain M478_RS19965 PF00072 Response regulator receiver domain M478_RS19965 PF00512 His Kinase A (phospho-acceptor) domain M478_RS19965 PF00672 HAMP domain M478_RS19965 PF01627 Hpt domain M478_RS19965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M478_RS19965 PF09984 M478_RS19965 M478_RS19970 PF02824 TGS domain M478_RS19970 PF04607 Region found in RelA / SpoT proteins M478_RS19970 PF13291 ACT domain M478_RS19970 PF13328 HD domain M478_RS19980 PF03819 MazG nucleotide pyrophosphohydrolase domain M478_RS19985 PF00117 Glutamine amidotransferase class-I M478_RS19985 PF06418 CTP synthase N-terminus M478_RS19990 PF00113 Enolase, C-terminal TIM barrel domain M478_RS19990 PF03952 Enolase, N-terminal domain M478_RS19995 PF00080 Copper/zinc superoxide dismutase (SODC) M478_RS20000 PF04055 Radical SAM superfamily M478_RS20000 PF13394 4Fe-4S single cluster domain M478_RS20005 PF01242 6-pyruvoyl tetrahydropterin synthase M478_RS20010 PF00175 Oxidoreductase NAD-binding domain M478_RS20010 PF00258 Flavodoxin M478_RS20010 PF00667 FAD binding domain M478_RS20015 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M478_RS20015 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M478_RS20025 PF15919 M478_RS20025 M478_RS20030 PF07927 YcfA-like protein M478_RS20045 PF01507 Phosphoadenosine phosphosulfate reductase family M478_RS20050 PF00009 Elongation factor Tu GTP binding domain M478_RS20055 PF01583 Adenylylsulphate kinase M478_RS20060 PF12084 M478_RS20060 M478_RS20065 PF04977 Septum formation initiator M478_RS20070 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase M478_RS20075 PF02542 YgbB family M478_RS20080 PF01142 tRNA pseudouridine synthase D (TruD) M478_RS20085 PF01975 Survival protein SurE M478_RS20090 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) M478_RS20095 PF01476 LysM domain M478_RS20095 PF01551 Peptidase family M23 M478_RS20100 PF00140 Sigma-70 factor, region 1 M478_RS20100 PF04539 Sigma-70 region 3 M478_RS20100 PF04542 Sigma-70 region 2 M478_RS20100 PF04545 Sigma-70, region 4 M478_RS20105 PF00488 MutS domain V M478_RS20105 PF01624 MutS domain I M478_RS20105 PF05188 MutS domain II M478_RS20105 PF05190 MutS family domain IV M478_RS20105 PF05192 MutS domain III M478_RS20115 PF02502 Ribose/Galactose Isomerase M478_RS20120 PF00107 Zinc-binding dehydrogenase M478_RS20120 PF08240 Alcohol dehydrogenase GroES-like domain M478_RS20125 PF13561 Enoyl-(Acyl carrier protein) reductase M478_RS20130 PF02733 Dak1 domain M478_RS20135 PF02734 DAK2 domain M478_RS20140 PF04198 Putative sugar-binding domain M478_RS20140 PF13518 Helix-turn-helix domain M478_RS20145 PF02040 M478_RS20145 M478_RS20150 PF01022 Bacterial regulatory protein, arsR family M478_RS20155 PF04703 FaeA-like protein M478_RS20165 PF00497 Bacterial extracellular solute-binding proteins, family 3 M478_RS20170 PF00034 Cytochrome c M478_RS20170 PF03150 Di-haem cytochrome c peroxidase M478_RS20170 PF14376 M478_RS20170 M478_RS20180 PF00593 TonB dependent receptor M478_RS20180 PF07715 TonB-dependent Receptor Plug Domain M478_RS20185 PF07906 M478_RS20185 M478_RS20195 PF00557 Metallopeptidase family M24 M478_RS20200 PF11903 M478_RS20200 M478_RS20205 PF05681 M478_RS20205 M478_RS20205 PF05683 Fumarase C-terminus M478_RS20210 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M478_RS20210 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M478_RS20215 PF01261 Xylose isomerase-like TIM barrel M478_RS20220 PF02653 M478_RS20220 M478_RS20225 PF02653 M478_RS20225 M478_RS20230 PF00005 ABC transporter M478_RS20235 PF01797 Transposase IS200 like M478_RS20240 PF13407 Periplasmic binding protein domain M478_RS20245 PF00455 M478_RS20245 M478_RS20245 PF08220 DeoR-like helix-turn-helix domain M478_RS20250 PF00596 Class II Aldolase and Adducin N-terminal domain M478_RS20255 PF00384 Molybdopterin oxidoreductase M478_RS20255 PF01568 Molydopterin dinucleotide binding domain M478_RS20255 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M478_RS20260 PF12800 4Fe-4S binding domain M478_RS20260 PF13247 4Fe-4S dicluster domain M478_RS20265 PF04976 M478_RS20265 M478_RS20270 PF02613 Nitrate reductase delta subunit M478_RS20275 PF01292 Prokaryotic cytochrome b561 M478_RS20280 PF07361 Cytochrome b562 M478_RS20285 PF00141 Peroxidase M478_RS20290 PF13407 Periplasmic binding protein domain M478_RS20295 PF10054 Predicted periplasmic lipoprotein (DUF2291) M478_RS20300 PF00005 ABC transporter M478_RS20305 PF02653 M478_RS20305 M478_RS20310 PF00456 Transketolase, thiamine diphosphate binding domain M478_RS20315 PF02779 Transketolase, pyrimidine binding domain M478_RS20315 PF02780 Transketolase, C-terminal domain M478_RS20320 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M478_RS20320 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M478_RS20325 PF02952 L-fucose isomerase, C-terminal domain M478_RS20335 PF01047 MarR family M478_RS20335 PF04198 Putative sugar-binding domain M478_RS20340 PF07690 Major Facilitator Superfamily M478_RS20345 PF02464 Competence-damaged protein M478_RS20350 PF00154 recA bacterial DNA recombination protein M478_RS20355 PF02631 RecX family M478_RS20360 PF01411 tRNA synthetases class II (A) M478_RS20360 PF02272 DHHA1 domain M478_RS20360 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M478_RS20365 PF02599 Global regulator protein family M478_RS20390 PF13419 Haloacid dehalogenase-like hydrolase M478_RS20400 PF04262 Glutamate-cysteine ligase M478_RS20405 PF02664 S-Ribosylhomocysteinase (LuxS) M478_RS20415 PF01797 Transposase IS200 like M478_RS20420 PF00571 CBS domain M478_RS20420 PF01595 M478_RS20420 M478_RS20420 PF03471 Transporter associated domain M478_RS20425 PF01578 M478_RS20425 M478_RS20430 PF00448 SRP54-type protein, GTPase domain M478_RS20430 PF02881 SRP54-type protein, helical bundle domain M478_RS20430 PF02978 Signal peptide binding domain M478_RS20435 PF00886 Ribosomal protein S16 M478_RS20440 PF01782 RimM N-terminal domain M478_RS20440 PF05239 PRC-barrel domain M478_RS20445 PF01746 tRNA (Guanine-1)-methyltransferase M478_RS20450 PF01245 Ribosomal protein L19 M478_RS20460 PF01797 Transposase IS200 like M478_RS20465 PF04338 Protein of unknown function, DUF481 M478_RS20470 PF03605 M478_RS20470 M478_RS20475 PF03605 M478_RS20475 M478_RS20480 PF03605 M478_RS20480 M478_RS20485 PF00072 Response regulator receiver domain M478_RS20485 PF04397 LytTr DNA-binding domain M478_RS20490 PF00793 DAHP synthetase I family M478_RS20495 PF01817 Chorismate mutase type II M478_RS20495 PF02153 Prephenate dehydrogenase M478_RS20500 PF00800 Prephenate dehydratase M478_RS20505 PF01695 IstB-like ATP binding protein M478_RS20515 PF00665 Integrase core domain M478_RS20515 PF02796 Helix-turn-helix domain of resolvase M478_RS20520 PF00800 Prephenate dehydratase M478_RS20520 PF01817 Chorismate mutase type II M478_RS20530 PF01797 Transposase IS200 like M478_RS20535 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein M478_RS20540 PF13525 Outer membrane lipoprotein M478_RS20545 PF00849 RNA pseudouridylate synthase M478_RS20545 PF01479 S4 domain M478_RS20550 PF02578 Multi-copper polyphenol oxidoreductase laccase M478_RS20555 PF00004 ATPase family associated with various cellular activities (AAA) M478_RS20555 PF02861 Clp amino terminal domain M478_RS20555 PF07724 AAA domain (Cdc48 subfamily) M478_RS20555 PF10431 C-terminal, D2-small domain, of ClpB protein M478_RS20590 PF10043 M478_RS20590 M478_RS20595 PF13091 PLD-like domain M478_RS20600 PF00583 Acetyltransferase (GNAT) family M478_RS20600 PF13380 CoA binding domain M478_RS20600 PF13549 ATP-grasp domain M478_RS20600 PF13607 Succinyl-CoA ligase like flavodoxin domain M478_RS20605 PF03942 M478_RS20605 M478_RS20610 PF00085 Thioredoxin M478_RS20615 PF00588 SpoU rRNA Methylase family M478_RS20615 PF08032 RNA 2'-O ribose methyltransferase substrate binding M478_RS20620 PF07690 Major Facilitator Superfamily M478_RS20625 PF00529 HlyD family secretion protein M478_RS20625 PF16576 M478_RS20625 M478_RS20630 PF01047 MarR family M478_RS20635 PF05437 M478_RS20635 M478_RS20640 PF03591 M478_RS20640 M478_RS20645 PF07690 Major Facilitator Superfamily M478_RS20650 PF11533 Protein of unknown function (DUF3225) M478_RS20655 PF01425 Amidase M478_RS20660 PF13318 M478_RS20660 M478_RS20665 PF01380 SIS domain M478_RS20665 PF01418 Helix-turn-helix domain, rpiR family M478_RS20675 PF00497 Bacterial extracellular solute-binding proteins, family 3 M478_RS20680 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS20685 PF00528 Binding-protein-dependent transport system inner membrane component M478_RS20690 PF00005 ABC transporter M478_RS20695 PF00266 Aminotransferase class-V M478_RS20700 PF01695 IstB-like ATP binding protein M478_RS20715 PF01546 Peptidase family M20/M25/M40 M478_RS20720 PF08479 POTRA domain, ShlB-type M478_RS20725 PF05860 haemagglutination activity domain M478_RS20725 PF13018 M478_RS20725 M478_RS20740 PF03333 Adhesin biosynthesis transcription regulatory protein M478_RS20745 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M478_RS20745 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M478_RS20745 PF09317 M478_RS20745 M478_RS20750 PF13580 SIS domain M478_RS20755 PF13230 Glutamine amidotransferases class-II M478_RS20760 PF03734 L,D-transpeptidase catalytic domain M478_RS20765 PF05896 M478_RS20765 M478_RS20765 PF11973 M478_RS20765 M478_RS20770 PF03116 M478_RS20770 M478_RS20775 PF04205 FMN-binding domain M478_RS20780 PF02508 M478_RS20780 M478_RS20785 PF02508 M478_RS20785 M478_RS20790 PF00111 2Fe-2S iron-sulfur cluster binding domain M478_RS20790 PF00175 Oxidoreductase NAD-binding domain M478_RS20790 PF00970 Oxidoreductase FAD-binding domain M478_RS20795 PF02424 ApbE family M478_RS20800 PF04400 M478_RS20800 M478_RS20805 PF03009 Glycerophosphoryl diester phosphodiesterase family M478_RS20810 PF00817 impB/mucB/samB family M478_RS20810 PF11798 IMS family HHH motif M478_RS20810 PF11799 impB/mucB/samB family C-terminal domain M478_RS20815 PF01546 Peptidase family M20/M25/M40 M478_RS20815 PF07687 Peptidase dimerisation domain M478_RS20825 PF03466 LysR substrate binding domain M478_RS20830 PF03067 Chitin binding domain M478_RS20835 PF16083 M478_RS20835 M478_RS20840 PF00156 Phosphoribosyl transferase domain M478_RS20845 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) M478_RS20850 PF07417 Transcriptional regulator Crl M478_RS20855 PF00696 Amino acid kinase family M478_RS20855 PF01472 PUA domain M478_RS20860 PF00171 Aldehyde dehydrogenase family M478_RS20865 PF07238 PilZ domain M478_RS20865 PF07317 Flagellar regulator YcgR M478_RS20875 PF08241 Methyltransferase domain M478_RS20885 PF00398 Ribosomal RNA adenine dimethylase M478_RS20890 PF01202 Shikimate kinase M478_RS20900 PF06865 Protein of unknown function (DUF1255) M478_RS20905 PF04381 Putative exonuclease, RdgC M478_RS20910 PF00480 ROK family M478_RS20915 PF13476 AAA domain M478_RS20915 PF13558 Putative exonuclease SbcCD, C subunit M478_RS20920 PF00149 Calcineurin-like phosphoesterase M478_RS20920 PF12320 Type 5 capsule protein repressor C-terminal domain M478_RS20930 PF00072 Response regulator receiver domain M478_RS20930 PF00486 Transcriptional regulatory protein, C terminal M478_RS20935 PF00512 His Kinase A (phospho-acceptor) domain M478_RS20935 PF00989 PAS fold M478_RS20935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M478_RS20935 PF11808 M478_RS20935 M478_RS20940 PF12849 PBP superfamily domain M478_RS20945 PF05525 M478_RS20945 M478_RS20950 PF01797 Transposase IS200 like M478_RS20955 PF00324 Amino acid permease M478_RS20960 PF00128 Alpha amylase, catalytic domain M478_RS20960 PF02903 Alpha amylase, N-terminal ig-like domain M478_RS20965 PF00106 short chain dehydrogenase M478_RS20970 PF01019 Gamma-glutamyltranspeptidase M478_RS20975 PF01019 Gamma-glutamyltranspeptidase M478_RS20985 PF00578 AhpC/TSA family M478_RS20985 PF10417 C-terminal domain of 1-Cys peroxiredoxin M478_RS20990 PF04336 M478_RS20990 M478_RS20995 PF02547 Queuosine biosynthesis protein M478_RS21000 PF01702 Queuine tRNA-ribosyltransferase M478_RS21005 PF02699 Preprotein translocase subunit M478_RS21010 PF02355 Protein export membrane protein M478_RS21010 PF07549 SecD/SecF GG Motif M478_RS21010 PF13721 SecD export protein N-terminal TM region M478_RS21015 PF02355 Protein export membrane protein M478_RS21015 PF07549 SecD/SecF GG Motif M478_RS21020 PF01797 Transposase IS200 like M478_RS21035 PF03477 ATP cone domain M478_RS21040 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M478_RS21040 PF01872 RibD C-terminal domain M478_RS21045 PF00885 6,7-dimethyl-8-ribityllumazine synthase M478_RS21050 PF01029 NusB family M478_RS21055 PF00586 AIR synthase related protein, N-terminal domain M478_RS21055 PF02769 AIR synthase related protein, C-terminal domain M478_RS21060 PF04608 Phosphatidylglycerophosphatase A M478_RS21070 PF01797 Transposase IS200 like M478_RS21075 PF02779 Transketolase, pyrimidine binding domain M478_RS21075 PF02780 Transketolase, C-terminal domain M478_RS21075 PF13292 1-deoxy-D-xylulose-5-phosphate synthase M478_RS21080 PF00348 Polyprenyl synthetase M478_RS21085 PF02609 Exonuclease VII small subunit M478_RS21095 PF02568 Thiamine biosynthesis protein (ThiI) M478_RS21095 PF02926 THUMP domain M478_RS21100 PF01965 DJ-1/PfpI family M478_RS21105 PF02558 Ketopantoate reductase PanE/ApbA M478_RS21105 PF08546 Ketopantoate reductase PanE/ApbA C terminal M478_RS21110 PF04461 Protein of unknown function (DUF520) M478_RS21115 PF07690 Major Facilitator Superfamily M478_RS21120 PF01040 UbiA prenyltransferase family M478_RS21125 PF03626 M478_RS21125 M478_RS21130 PF00510 Cytochrome c oxidase subunit III M478_RS21135 PF00115 Cytochrome C and Quinol oxidase polypeptide I M478_RS21140 PF06481 COX Aromatic Rich Motif M478_RS21145 PF03502 Nucleoside-specific channel-forming protein, Tsx M478_RS21150 PF07690 Major Facilitator Superfamily M478_RS21155 PF03923 M478_RS21155 M478_RS21155 PF08139 M478_RS21155 M478_RS21160 PF01722 BolA-like protein M478_RS21170 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M478_RS21170 PF05697 Bacterial trigger factor protein (TF) M478_RS21170 PF05698 Bacterial trigger factor protein (TF) C-terminus M478_RS21175 PF00574 Clp protease M478_RS21180 PF06689 ClpX C4-type zinc finger M478_RS21180 PF07724 AAA domain (Cdc48 subfamily) M478_RS21180 PF10431 C-terminal, D2-small domain, of ClpB protein M478_RS21185 PF00004 ATPase family associated with various cellular activities (AAA) M478_RS21185 PF02190 ATP-dependent protease La (LON) domain M478_RS21185 PF05362 Lon protease (S16) C-terminal proteolytic domain M478_RS21190 PF00216 Bacterial DNA-binding protein M478_RS21195 PF13145 PPIC-type PPIASE domain M478_RS21195 PF13624 SurA N-terminal domain M478_RS21200 PF12836 Helix-hairpin-helix motif M478_RS21205 PF13279 Thioesterase-like superfamily M478_RS21210 PF06508 Queuosine biosynthesis protein QueC M478_RS21215 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M478_RS21215 PF12793 M478_RS21215 M478_RS21220 PF08282 haloacid dehalogenase-like hydrolase M478_RS21225 PF00291 Pyridoxal-phosphate dependent enzyme M478_RS21230 PF01037 AsnC family M478_RS21230 PF13412 Winged helix-turn-helix DNA-binding M478_RS21235 PF00005 ABC transporter M478_RS21235 PF00664 ABC transporter transmembrane region M478_RS21240 PF00005 ABC transporter M478_RS21240 PF00664 ABC transporter transmembrane region M478_RS21245 PF00543 Nitrogen regulatory protein P-II M478_RS21250 PF00909 Ammonium Transporter Family M478_RS21255 PF13622 Thioesterase-like superfamily M478_RS21260 PF09619 Type III secretion system lipoprotein chaperone (YscW) M478_RS21265 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M478_RS21270 PF05321 Haemolysin expression modulating protein M478_RS21275 PF10757 M478_RS21275 M478_RS21285 PF00444 Ribosomal protein L36 M478_RS21290 PF01197 Ribosomal protein L31 M478_RS21295 PF00873 AcrB/AcrD/AcrF family M478_RS21300 PF00529 HlyD family secretion protein M478_RS21300 PF16576 M478_RS21300 M478_RS21305 PF00440 Bacterial regulatory proteins, tetR family M478_RS21305 PF08361 MAATS-type transcriptional repressor, C-terminal region M478_RS21310 PF02635 DsrE/DsrF-like family M478_RS21315 PF00924 Mechanosensitive ion channel M478_RS21315 PF12794 M478_RS21315 M478_RS21315 PF12795 M478_RS21315 M478_RS21320 PF10689 M478_RS21320 M478_RS21325 PF07445 Primosomal replication protein priB and priC M478_RS21335 PF00156 Phosphoribosyl transferase domain M478_RS21340 PF12168 M478_RS21340 M478_RS21340 PF12169 DNA polymerase III subunits gamma and tau domain III M478_RS21340 PF12170 DNA polymerase III tau subunit V interacting with alpha M478_RS21340 PF13177 DNA polymerase III, delta subunit M478_RS21345 PF02575 YbaB/EbfC DNA-binding family M478_RS21350 PF02132 RecR protein M478_RS21350 PF13662 Toprim domain M478_RS21355 PF00183 Hsp90 protein M478_RS21355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M478_RS21360 PF00406 Adenylate kinase M478_RS21360 PF05191 Adenylate kinase, active site lid M478_RS21365 PF00762 Ferrochelatase M478_RS21370 PF00111 2Fe-2S iron-sulfur cluster binding domain M478_RS21370 PF00175 Oxidoreductase NAD-binding domain M478_RS21370 PF00970 Oxidoreductase FAD-binding domain M478_RS21375 PF00483 Nucleotidyl transferase M478_RS21385 PF16363 M478_RS21385 M478_RS21390 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family M478_RS21395 PF01370 NAD dependent epimerase/dehydratase family M478_RS21400 PF13450 NAD(P)-binding Rossmann-like domain M478_RS21410 PF00535 Glycosyl transferase family 2 M478_RS21415 PF13692 Glycosyl transferases group 1 M478_RS21425 PF00534 Glycosyl transferases group 1 M478_RS21425 PF13439 Glycosyltransferase Family 4 M478_RS21435 PF01370 NAD dependent epimerase/dehydratase family M478_RS21440 PF00483 Nucleotidyl transferase M478_RS21440 PF01050 Mannose-6-phosphate isomerase M478_RS21445 PF00535 Glycosyl transferase family 2 M478_RS21450 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M478_RS21450 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M478_RS21450 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M478_RS21450 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M478_RS21455 PF02706 Chain length determinant protein M478_RS21460 PF00294 pfkB family carbohydrate kinase M478_RS21465 PF00999 Sodium/hydrogen exchanger family M478_RS21465 PF02254 TrkA-N domain M478_RS21470 PF07690 Major Facilitator Superfamily M478_RS21480 PF00149 Calcineurin-like phosphoesterase M478_RS21485 PF02872 5'-nucleotidase, C-terminal domain M478_RS21500 PF04073 Aminoacyl-tRNA editing domain M478_RS21505 PF01963 M478_RS21505 M478_RS21510 PF00122 E1-E2 ATPase M478_RS21510 PF00403 Heavy-metal-associated domain M478_RS21510 PF00702 haloacid dehalogenase-like hydrolase M478_RS21515 PF13411 MerR HTH family regulatory protein M478_RS21520 PF01957 NfeD-like C-terminal, partner-binding M478_RS21525 PF01145 SPFH domain / Band 7 family M478_RS21530 PF00085 Thioredoxin M478_RS21530 PF14559 Tetratricopeptide repeat M478_RS21530 PF14561 Tetratricopeptide repeat M478_RS21535 PF00106 short chain dehydrogenase M478_RS21540 PF13472 GDSL-like Lipase/Acylhydrolase family M478_RS21545 PF00005 ABC transporter M478_RS21550 PF02687 M478_RS21550 M478_RS21555 PF02222 ATP-grasp domain M478_RS21560 PF00731 AIR carboxylase M478_RS21565 PF00149 Calcineurin-like phosphoesterase M478_RS21570 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M478_RS21575 PF01406 tRNA synthetases class I (C) catalytic domain M478_RS21575 PF09190 DALR domain M478_RS21590 PF13275 S4 domain M478_RS21595 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain M478_RS21595 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain M478_RS21605 PF05930 Prophage CP4-57 regulatory protein (AlpA) M478_RS21640 PF01066 CDP-alcohol phosphatidyltransferase M478_RS21645 PF01148 Cytidylyltransferase family M478_RS21650 PF01553 Acyltransferase M478_RS21655 PF12146 Putative lysophospholipase M478_RS21655 PF12147 M478_RS21655 M478_RS21660 PF00782 Dual specificity phosphatase, catalytic domain M478_RS21660 PF14378 M478_RS21660 M478_RS21675 PF01695 IstB-like ATP binding protein M478_RS21680 PF00665 Integrase core domain M478_RS21680 PF02796 Helix-turn-helix domain of resolvase M478_RS21685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M478_RS21685 PF03466 LysR substrate binding domain M478_RS21690 PF00248 Aldo/keto reductase family M478_RS21695 PF00248 Aldo/keto reductase family M478_RS21715 PF00933 Glycosyl hydrolase family 3 N terminal domain M478_RS21715 PF01915 Glycosyl hydrolase family 3 C-terminal domain M478_RS21715 PF14310 Fibronectin type III-like domain M478_RS21720 PF14345 M478_RS21720 M478_RS21725 PF09925 M478_RS21725 M478_RS21725 PF14351 M478_RS21725 M478_RS21730 PF00872 M478_RS21730 M478_RS21740 PF11459 M478_RS21740 M478_RS21740 PF17194 M478_RS21740 M478_RS21745 PF03212 Pertactin M478_RS21745 PF03797 Autotransporter beta-domain M478_RS21760 PF05638 Protein of unknown function (DUF796) M478_RS21765 PF06836 M478_RS21765 M478_RS21770 PF06836 M478_RS21770 M478_RS21785 PF13693 Winged helix-turn-helix DNA-binding M478_RS21790 PF00905 Penicillin binding protein transpeptidase domain M478_RS21790 PF00912 Transglycosylase M478_RS21790 PF06832 M478_RS21790 M478_RS21800 PF01797 Transposase IS200 like M478_RS21805 PF00207 Alpha-2-macroglobulin family M478_RS21805 PF01835 MG2 domain M478_RS21805 PF07703 Alpha-2-macroglobulin family N-terminal region M478_RS21805 PF11974 Alpha-2-macroglobulin MG1 domain M478_RS21810 PF07274 M478_RS21810 M478_RS21815 PF01380 SIS domain M478_RS21815 PF01418 Helix-turn-helix domain, rpiR family M478_RS21820 PF00171 Aldehyde dehydrogenase family M478_RS21825 PF00205 Thiamine pyrophosphate enzyme, central domain M478_RS21825 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M478_RS21825 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M478_RS21865 PF09863 Uncharacterized protein conserved in bacteria (DUF2090)