locus-tag	class	description
CH56_RS00040	COG2195	Cleaves the N-terminal amino acid of tripeptides
CH56_RS00105	COG1960	acyl-CoA dehydrogenase activity
CH56_RS00425	COG0641	radical SAM
CH56_RS00450	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CH56_RS00590	COG2195	Cleaves the N-terminal amino acid of tripeptides
CH56_RS00610	COG1477	protein flavinylation
CH56_RS00630	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
CH56_RS00635	COG1805	sodium ion transport
CH56_RS00645	COG3034	peptidoglycan biosynthetic process
CH56_RS00650	COG0121	glutamine amidotransferase
CH56_RS00660	COG1960	acyl-CoA dehydrogenase activity
CH56_RS00670	COG3914	O-linked N-acetylglucosamine transferase SPINDLY family
CH56_RS00715	COG0436	Aminotransferase
CH56_RS00730	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
CH56_RS00740	COG2805	Type II/IV secretion system protein
CH56_RS00750	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CH56_RS00765	COG0189	ligase activity
CH56_RS00770	COG1385	rRNA (uridine-N3-)-methyltransferase activity
CH56_RS00775	COG2356	endonuclease I
CH56_RS00790	COG1166	arginine decarboxylase activity
CH56_RS00800	COG0501	Belongs to the peptidase M48B family
CH56_RS00805	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
CH56_RS00815	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CH56_RS00815	COG1263	PTS System
CH56_RS00845	COG2271	Major facilitator Superfamily
CH56_RS00875	COG3119	arylsulfatase activity
CH56_RS00880	COG0641	radical SAM
CH56_RS00890	COG1028	Short-chain dehydrogenase reductase Sdr
CH56_RS00900	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
CH56_RS00905	COG3716	PTS system mannose fructose sorbose family IID component
CH56_RS00910	COG3715	PTS system
CH56_RS00915	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CH56_RS00920	COG2222	sugar isomerase
CH56_RS00930	COG1349	DNA-binding transcription factor activity
CH56_RS00935	COG3119	arylsulfatase activity
CH56_RS00945	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CH56_RS00950	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CH56_RS00955	COG1862	Preprotein translocase
CH56_RS00975	COG0450	alkyl hydroperoxide reductase
CH56_RS01005	COG0366	Alpha amylase catalytic
CH56_RS01030	COG0812	UDP-N-acetylmuramate dehydrogenase activity
CH56_RS01060	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
CH56_RS01070	COG2011	ABC-type metal ion transport system permease component
CH56_RS01075	COG1464	Belongs to the NlpA lipoprotein family
CH56_RS01085	COG1720	tRNA m6t6A37 methyltransferase activity
CH56_RS01095	COG3015	lipoprotein NlpE involved in copper resistance
CH56_RS01105	COG4681	YaeQ
CH56_RS01115	COG4568	rho-dependent transcription termination
CH56_RS01125	COG0037	tRNA processing
CH56_RS01130	COG0346	lactoylglutathione lyase activity
CH56_RS01140	COG0587	DNA-directed DNA polymerase activity
CH56_RS01165	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CH56_RS01180	COG0750	zinc metalloprotease
CH56_RS01185	COG0575	Belongs to the CDS family
CH56_RS01245	COG0564	pseudouridine synthase activity
CH56_RS01250	COG3098	single-species biofilm formation
CH56_RS01270	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
CH56_RS01280	COG0765	amino acid transport
CH56_RS01320	COG2814	Major facilitator Superfamily
CH56_RS01325	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
CH56_RS01335	COG1846	Transcriptional regulator
CH56_RS01340	COG1566	PFAM secretion protein HlyD family protein
CH56_RS01345	COG2814	Major facilitator Superfamily
CH56_RS01350	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CH56_RS01355	COG3118	belongs to the thioredoxin family
CH56_RS01360	COG3148	PFAM DTW domain containing protein
CH56_RS01365	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CH56_RS01365	COG1042	CoA-binding domain protein
CH56_RS01365	COG0045	succinate-CoA ligase (ADP-forming) activity
CH56_RS01370	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CH56_RS01375	COG5544	Lipoprotein
CH56_RS01405	COG0542	response to heat
CH56_RS01415	COG0564	pseudouridine synthase activity
CH56_RS01420	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CH56_RS01425	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
CH56_RS01440	COG0077	Prephenate dehydratase
CH56_RS01440	COG1605	Chorismate mutase
CH56_RS01445	COG0287	Prephenate dehydrogenase
CH56_RS01445	COG1605	Chorismate mutase
CH56_RS01450	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CH56_RS01455	COG3279	Response regulator of the LytR AlgR family
CH56_RS01470	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
CH56_RS01485	COG1263	PTS System
CH56_RS01485	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CH56_RS01490	COG0084	hydrolase, TatD family'
CH56_RS01495	COG0470	DNA polymerase III
CH56_RS01505	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
CH56_RS01510	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CH56_RS01525	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CH56_RS01555	COG0333	Belongs to the bacterial ribosomal protein bL32 family
CH56_RS01560	COG1399	metal-binding, possibly nucleic acid-binding protein
CH56_RS01565	COG0424	maF-like protein
CH56_RS01570	COG0564	pseudouridine synthase activity
CH56_RS01575	COG1530	ribonuclease E activity
CH56_RS01580	COG3328	transposase activity
CH56_RS01585	COG2271	Major facilitator Superfamily
CH56_RS01590	COG0251	oxidation-reduction process
CH56_RS01600	COG2964	Protein conserved in bacteria
CH56_RS01620	COG0840	transmembrane signaling receptor activity
CH56_RS01625	COG0840	transmembrane signaling receptor activity
CH56_RS01630	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
CH56_RS01640	COG0745	RESPONSE REGULATOR receiver
CH56_RS01645	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
CH56_RS01655	COG3023	N-Acetylmuramoyl-L-alanine amidase
CH56_RS01665	COG5295	Hep Hag repeat protein
CH56_RS01715	COG2113	Glycine betaine
CH56_RS01720	COG4176	ABC-type proline glycine betaine transport system permease component
CH56_RS01725	COG4175	Glycine betaine
CH56_RS01730	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CH56_RS01770	COG1278	Cold shock
CH56_RS01775	COG0747	negative chemotaxis
CH56_RS01785	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CH56_RS01790	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
CH56_RS01795	COG1124	(ABC) transporter
CH56_RS01800	COG0831	urea catabolic process
CH56_RS01825	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
CH56_RS01835	COG4413	Urea transporter
CH56_RS01840	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
CH56_RS01855	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CH56_RS01865	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CH56_RS01875	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CH56_RS01880	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CH56_RS01890	COG1917	Cupin 2, conserved barrel domain protein
CH56_RS01890	COG2169	Transcriptional regulator
CH56_RS01910	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
CH56_RS01915	COG0033	Phosphoglucomutase
CH56_RS01935	COG0745	RESPONSE REGULATOR receiver
CH56_RS01940	COG2205	protein histidine kinase activity
CH56_RS01975	COG3272	Protein of unknown function (DUF1722)
CH56_RS01985	COG5212	phosphodiesterase
CH56_RS01990	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
CH56_RS02000	COG1984	allophanate hydrolase subunit 2
CH56_RS02050	COG0513	Belongs to the DEAD box helicase family
CH56_RS02060	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
CH56_RS02075	COG3026	antisigma factor binding
CH56_RS02080	COG3086	response to oxidative stress
CH56_RS02115	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
CH56_RS02135	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
CH56_RS02140	COG1737	Transcriptional regulator
CH56_RS02150	COG0560	Phosphoserine phosphatase
CH56_RS02190	COG2205	protein histidine kinase activity
CH56_RS02195	COG3170	Tfp pilus assembly protein FimV
CH56_RS02200	COG2204	response regulator
CH56_RS02205	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CH56_RS02205	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
CH56_RS02210	COG0347	Belongs to the P(II) protein family
CH56_RS02215	COG2188	Transcriptional regulator
CH56_RS02240	COG0805	protein transport
CH56_RS02250	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CH56_RS02270	COG1322	Protein conserved in bacteria
CH56_RS02275	COG0586	Pfam SNARE associated Golgi protein
CH56_RS02280	COG1966	Carbon starvation protein
CH56_RS02295	COG0412	Dienelactone hydrolase
CH56_RS02305	COG0583	DNA-binding transcription factor activity
CH56_RS02310	COG0697	spore germination
CH56_RS02315	COG0679	Auxin Efflux Carrier
CH56_RS02320	COG0584	glycerophosphoryl diester phosphodiesterase
CH56_RS02380	COG0410	ABC transporter
CH56_RS02400	COG0683	leucine binding
CH56_RS02450	COG0049	tRNA binding
CH56_RS02455	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
CH56_RS02475	COG2964	Protein conserved in bacteria
CH56_RS02480	COG0545	Peptidyl-prolyl cis-trans isomerase
CH56_RS02490	COG1047	Peptidyl-prolyl cis-trans
CH56_RS02495	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
CH56_RS02510	COG0488	(ABC) transporter
CH56_RS02515	COG1216	Glycosyl transferase, family 2
CH56_RS02525	COG2175	clavaminate synthase activity
CH56_RS02530	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CH56_RS02540	COG4521	taurine ABC transporter
CH56_RS02550	COG0429	hydrolase of the alpha beta-hydrolase fold
CH56_RS02560	COG3954	Phosphoribulokinase
CH56_RS02570	COG1765	OsmC-like protein
CH56_RS02580	COG1289	transmembrane transporter activity
CH56_RS02595	COG0433	COG0433 Predicted ATPase
CH56_RS02600	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CH56_RS02625	COG0402	S-adenosylhomocysteine deaminase activity
CH56_RS02650	COG0180	Tryptophanyl-tRNA synthetase
CH56_RS02655	COG0546	phosphoglycolate phosphatase activity
CH56_RS02660	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
CH56_RS02685	COG4796	Type ii and iii secretion system protein
CH56_RS02715	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
CH56_RS02720	COG0494	nUDIX hydrolase
CH56_RS02735	COG1011	Hydrolase
CH56_RS02740	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
CH56_RS02770	COG2183	response to ionizing radiation
CH56_RS02780	COG1918	ferrous iron import across plasma membrane
CH56_RS02810	COG1640	4-alpha-glucanotransferase
CH56_RS02815	COG0058	SHG alpha-glucan phosphorylase activity
CH56_RS02820	COG0058	SHG alpha-glucan phosphorylase activity
CH56_RS02840	COG1349	DNA-binding transcription factor activity
CH56_RS02850	COG2801	Transposase and inactivated derivatives
CH56_RS02900	COG2864	formate dehydrogenase
CH56_RS02905	COG0437	4 iron, 4 sulfur cluster binding
CH56_RS02910	COG0243	molybdopterin cofactor binding
CH56_RS02910	COG3383	formate dehydrogenase (NAD+) activity
CH56_RS02915	COG3383	formate dehydrogenase (NAD+) activity
CH56_RS02915	COG0243	molybdopterin cofactor binding
CH56_RS02925	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CH56_RS02950	COG3722	fumarate hydratase activity
CH56_RS02960	COG2213	PTS system mannitol-specific
CH56_RS02960	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
CH56_RS02980	COG2818	Glycosylase
CH56_RS02990	COG2885	chlorophyll binding
CH56_RS03005	COG0366	Alpha amylase catalytic
CH56_RS03015	COG3977	Valine--pyruvate aminotransferase
CH56_RS03035	COG5645	(Lipo)protein
CH56_RS03040	COG0823	Involved in the tonB-independent uptake of proteins
CH56_RS03045	COG0823	Involved in the tonB-independent uptake of proteins
CH56_RS03050	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CH56_RS03055	COG2423	ornithine cyclodeaminase activity
CH56_RS03080	COG2801	Transposase and inactivated derivatives
CH56_RS03085	COG2801	Transposase and inactivated derivatives
CH56_RS03095	COG0460	homoserine dehydrogenase
CH56_RS03095	COG0527	aspartate kinase activity
CH56_RS03100	COG0626	cystathionine gamma-synthase activity
CH56_RS03115	COG4682	membrane
CH56_RS03135	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CH56_RS03145	COG1609	Transcriptional regulator
CH56_RS03165	COG0191	fructose-bisphosphate aldolase activity
CH56_RS03200	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CH56_RS03205	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
CH56_RS03220	COG0006	proline dipeptidase activity
CH56_RS03225	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CH56_RS03230	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CH56_RS03260	COG5295	Hep Hag repeat protein
CH56_RS03270	COG1272	protein, Hemolysin III
CH56_RS03295	COG0745	RESPONSE REGULATOR receiver
CH56_RS03300	COG2205	protein histidine kinase activity
CH56_RS03305	COG4452	Inner membrane protein CreD
CH56_RS03310	COG0716	FMN binding
CH56_RS03315	COG4974	Belongs to the 'phage' integrase family
CH56_RS03320	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
CH56_RS03325	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
CH56_RS03345	COG0582	viral genome integration into host DNA
CH56_RS03375	COG2944	sequence-specific DNA binding
CH56_RS03470	COG1695	Transcriptional regulator
CH56_RS03475	COG0791	NLP P60 protein
CH56_RS03485	COG1879	ABC-type sugar transport system periplasmic component
CH56_RS03490	COG1172	Belongs to the binding-protein-dependent transport system permease family
CH56_RS03495	COG1129	ABC transporter
CH56_RS03505	COG2182	Extracellular solute-binding protein
CH56_RS03510	COG1175	transmembrane transport
CH56_RS03515	COG3833	ABC-type maltose transport systems, permease component
CH56_RS03520	COG3867	Arabinogalactan endo-beta-1,4-galactanase
CH56_RS03535	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CH56_RS03560	COG1629	transport
CH56_RS03580	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
CH56_RS03600	COG2801	Transposase and inactivated derivatives
CH56_RS03660	COG1175	transmembrane transport
CH56_RS03665	COG3833	ABC-type maltose transport systems, permease component
CH56_RS03680	COG0527	aspartate kinase activity
CH56_RS03705	COG1414	Transcriptional regulator
CH56_RS03820	COG1301	dicarboxylic acid transport
CH56_RS03830	COG3162	membrane
CH56_RS03855	COG3061	Opacity-associated protein A
CH56_RS03860	COG0545	Peptidyl-prolyl cis-trans isomerase
CH56_RS03870	COG0737	Belongs to the 5'-nucleotidase family
CH56_RS03880	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
CH56_RS03890	COG1253	flavin adenine dinucleotide binding
CH56_RS03900	COG0729	surface antigen
CH56_RS03905	COG2911	Protein conserved in bacteria
CH56_RS03910	COG2105	PFAM AIG2 family protein
CH56_RS03915	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
CH56_RS03925	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
CH56_RS03950	COG3423	Transcriptional regulator
CH56_RS03960	COG0142	geranyltranstransferase activity
CH56_RS03975	COG0697	spore germination
CH56_RS03995	COG0745	RESPONSE REGULATOR receiver
CH56_RS04000	COG2027	D-alanyl-D-alanine carboxypeptidase
CH56_RS04010	COG1534	Rna-binding protein
CH56_RS04025	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
CH56_RS04035	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CH56_RS04055	COG0195	Participates in both transcription termination and antitermination
CH56_RS04085	COG2801	Transposase and inactivated derivatives
CH56_RS04100	COG0513	Belongs to the DEAD box helicase family
CH56_RS04120	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CH56_RS04130	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CH56_RS04140	COG0826	peptidase U32
CH56_RS04145	COG0826	peptidase U32
CH56_RS04155	COG3154	lipid carrier protein
CH56_RS04160	COG3153	acetyltransferase
CH56_RS04180	COG1653	transport
CH56_RS04185	COG1175	transmembrane transport
CH56_RS04190	COG0395	ABC-type sugar transport system, permease component
CH56_RS04195	COG3842	ATPase activity
CH56_RS04210	COG0702	epimerase
CH56_RS04215	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
CH56_RS04220	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
CH56_RS04225	COG3454	Phosphonate metabolism
CH56_RS04230	COG4778	phosphonate C-P lyase system protein PhnL
CH56_RS04235	COG4107	phosphonate C-P lyase system protein PhnK
CH56_RS04240	COG3627	carbon phosphorus lyase activity
CH56_RS04245	COG3626	phosphonate metabolism
CH56_RS04250	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
CH56_RS04260	COG2188	Transcriptional regulator
CH56_RS04275	COG4608	Belongs to the ABC transporter superfamily
CH56_RS04280	COG0444	Belongs to the ABC transporter superfamily
CH56_RS04285	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CH56_RS04290	COG0601	transmembrane transport
CH56_RS04300	COG2731	YhcH YjgK YiaL family protein
CH56_RS04310	COG3076	Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome
CH56_RS04320	COG0525	valine-tRNA ligase activity
CH56_RS04325	COG2927	DNA polymerase III (CHI subunit)
CH56_RS04335	COG0795	lipopolysaccharide-transporting ATPase activity
CH56_RS04340	COG0795	lipopolysaccharide-transporting ATPase activity
CH56_RS04350	COG0582	viral genome integration into host DNA
CH56_RS04380	COG0747	negative chemotaxis
CH56_RS04385	COG0601	transmembrane transport
CH56_RS04390	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CH56_RS04395	COG0444	Belongs to the ABC transporter superfamily
CH56_RS04400	COG4608	Belongs to the ABC transporter superfamily
CH56_RS04405	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
CH56_RS04410	COG2200	EAL domain
CH56_RS04410	COG2199	diguanylate cyclase activity
CH56_RS04415	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
CH56_RS04435	COG0612	Peptidase, M16
CH56_RS04440	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CH56_RS04445	COG1942	4-Oxalocrotonate Tautomerase
CH56_RS04450	COG2200	EAL domain
CH56_RS04455	COG2982	Protein involved in outer membrane biogenesis
CH56_RS04460	COG2134	cdp-diacylglycerol pyrophosphatase
CH56_RS04465	COG1295	ribonuclease BN
CH56_RS04490	COG1929	Belongs to the glycerate kinase type-1 family
CH56_RS04495	COG2610	gluconate transmembrane transporter activity
CH56_RS04500	COG3835	regulator
CH56_RS04505	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CH56_RS04510	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
CH56_RS04515	COG0339	signal peptide processing
CH56_RS04535	COG0589	response to stress
CH56_RS04545	COG3328	transposase activity
CH56_RS04560	COG0306	phosphate transporter
CH56_RS04565	COG2081	HI0933 family
CH56_RS04580	COG1172	Belongs to the binding-protein-dependent transport system permease family
CH56_RS04615	COG1741	Belongs to the pirin family
CH56_RS04620	COG1609	Transcriptional regulator
CH56_RS04625	COG2610	gluconate transmembrane transporter activity
CH56_RS04630	COG3265	gluconokinase activity
CH56_RS04650	COG2095	MarC family integral membrane protein
CH56_RS04655	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CH56_RS04685	COG3275	phosphorelay sensor kinase activity
CH56_RS04710	COG0058	SHG alpha-glucan phosphorylase activity
CH56_RS04715	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
CH56_RS04720	COG3328	transposase activity
CH56_RS04740	COG2831	hemolysin activation secretion protein
CH56_RS04755	COG2271	Major facilitator Superfamily
CH56_RS04760	COG3851	Histidine kinase
CH56_RS04765	COG2197	response regulator
CH56_RS04770	COG2194	sulfuric ester hydrolase activity
CH56_RS04785	COG2986	histidine ammonia-lyase
CH56_RS04815	COG4607	ABC-type enterochelin transport system periplasmic component
CH56_RS04825	COG4605	iron ion homeostasis
CH56_RS04830	COG4604	ABC transporter, ATP-binding protein
CH56_RS04870	COG0582	viral genome integration into host DNA
CH56_RS04875	COG1609	Transcriptional regulator
CH56_RS04875	COG2207	Transcriptional regulator
CH56_RS04880	COG4214	carbohydrate transport
CH56_RS04905	COG1070	Carbohydrate kinase
CH56_RS04915	COG3121	Chaperone
CH56_RS04935	COG3274	enterobacterial common antigen metabolic process
CH56_RS04950	COG2801	Transposase and inactivated derivatives
CH56_RS04955	COG0561	phosphatase activity
CH56_RS04960	COG0187	DNA topoisomerase II activity
CH56_RS04975	COG0592	DNA-directed DNA polymerase activity
CH56_RS04985	COG0230	Belongs to the bacterial ribosomal protein bL34 family
CH56_RS04995	COG0706	membrane insertase activity
CH56_RS05020	COG2252	PERMEase
CH56_RS05025	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CH56_RS05030	COG0765	amino acid transport
CH56_RS05035	COG0765	amino acid transport
CH56_RS05040	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CH56_RS05050	COG0704	Plays a role in the regulation of phosphate uptake
CH56_RS05060	COG0581	inorganic phosphate transmembrane transporter activity
CH56_RS05065	COG0573	inorganic phosphate transmembrane transporter activity
CH56_RS05070	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
CH56_RS05125	COG3312	ion transport
CH56_RS05140	COG0716	FMN binding
CH56_RS05145	COG1522	sequence-specific DNA binding
CH56_RS05175	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CH56_RS05185	COG0477	Major facilitator Superfamily
CH56_RS05190	COG2186	Transcriptional regulator
CH56_RS05220	COG3328	transposase activity
CH56_RS05225	COG1763	Mo-molybdopterin cofactor biosynthetic process
CH56_RS05235	COG3084	Protein conserved in bacteria
CH56_RS05240	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CH56_RS05245	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
CH56_RS05250	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CH56_RS05250	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CH56_RS05265	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CH56_RS05275	COG3852	Histidine kinase
CH56_RS05290	COG0174	glutamine synthetase
CH56_RS05305	COG1011	Hydrolase
CH56_RS05325	COG0456	acetyltransferase
CH56_RS05330	COG2982	Protein involved in outer membrane biogenesis
CH56_RS05335	COG2233	PERMEase
CH56_RS05340	COG0786	glutamate:sodium symporter activity
CH56_RS05345	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
CH56_RS05350	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CH56_RS05355	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CH56_RS05375	COG2860	membrane
CH56_RS05380	COG1561	YicC-like family, N-terminal region
CH56_RS05415	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CH56_RS05450	COG1519	Transferase
CH56_RS05455	COG0859	PFAM glycosyl transferase family 9
CH56_RS05460	COG0859	PFAM glycosyl transferase family 9
CH56_RS05470	COG0156	8-amino-7-oxononanoate synthase activity
CH56_RS05485	COG4942	peptidase
CH56_RS05495	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CH56_RS05500	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
CH56_RS05520	COG1045	serine acetyltransferase
CH56_RS05525	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
CH56_RS05530	COG2169	Transcriptional regulator
CH56_RS05530	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CH56_RS05545	COG2205	protein histidine kinase activity
CH56_RS05550	COG0745	RESPONSE REGULATOR receiver
CH56_RS05555	COG3678	ATP-independent chaperone mediated protein folding
CH56_RS05575	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
CH56_RS05585	COG0471	metal ion transport
CH56_RS05590	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
CH56_RS05595	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
CH56_RS05600	COG0583	DNA-binding transcription factor activity
CH56_RS05615	COG3152	Membrane
CH56_RS05625	COG1494	fructose-1,6-bisphosphatase
CH56_RS05630	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
CH56_RS05635	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
CH56_RS05685	COG1575	Belongs to the MenA family. Type 1 subfamily
CH56_RS05700	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
CH56_RS05705	COG1609	Transcriptional regulator
CH56_RS05720	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
CH56_RS05720	COG0678	peroxiredoxin activity
CH56_RS05800	COG2801	Transposase and inactivated derivatives
CH56_RS05820	COG2805	Type II/IV secretion system protein
CH56_RS05825	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
CH56_RS05830	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CH56_RS05835	COG0762	integral membrane protein
CH56_RS05845	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
CH56_RS05850	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CH56_RS05855	COG3328	transposase activity
CH56_RS05860	COG3064	Membrane
CH56_RS05860	COG1073	alpha beta
CH56_RS05860	COG2931	calcium- and calmodulin-responsive adenylate cyclase activity
CH56_RS05880	COG3171	Protein conserved in bacteria
CH56_RS05890	COG1194	a g-specific adenine glycosylase
CH56_RS05910	COG4774	siderophore transport
CH56_RS05915	COG1172	Belongs to the binding-protein-dependent transport system permease family
CH56_RS05920	COG1129	ABC transporter
CH56_RS05925	COG1879	ABC-type sugar transport system periplasmic component
CH56_RS05930	COG1982	Orn Lys Arg decarboxylase major
CH56_RS06035	COG3916	Acyl-homoserine-lactone synthase
CH56_RS06040	COG2771	luxR family
CH56_RS06045	COG3328	transposase activity
CH56_RS06095	COG2211	Major facilitator Superfamily
CH56_RS06100	COG2801	Transposase and inactivated derivatives
CH56_RS06145	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
CH56_RS06150	COG1191	sigma factor activity
CH56_RS06175	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
CH56_RS06180	COG3328	transposase activity
CH56_RS06205	COG3710	Transcriptional regulator
CH56_RS06225	COG1256	bacterial-type flagellum assembly
CH56_RS06235	COG1706	bacterial-type flagellum-dependent cell motility
CH56_RS06245	COG4786	Flagellar basal body rod
CH56_RS06250	COG4787	bacterial-type flagellum-dependent cell motility
CH56_RS06255	COG1749	Flagellar hook protein flgE
CH56_RS06260	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
CH56_RS06265	COG1558	bacterial-type flagellum-dependent cell motility
CH56_RS06270	COG1815	bacterial-type flagellum-dependent cell motility
CH56_RS06275	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
CH56_RS06315	COG1677	Flagellar hook-basal body complex protein FliE
CH56_RS06340	COG1987	bacterial-type flagellum assembly
CH56_RS06345	COG1684	flagellar biosynthetic protein fliR
CH56_RS06350	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CH56_RS06370	COG4592	Periplasmic binding protein
CH56_RS06405	COG4964	Belongs to the GSP D family
CH56_RS06410	COG4964	Belongs to the GSP D family
CH56_RS06460	COG0848	biopolymer transport protein
CH56_RS06465	COG0811	peptide transport
CH56_RS06470	COG0626	cystathionine gamma-synthase activity
CH56_RS06475	COG0586	Pfam SNARE associated Golgi protein
CH56_RS06480	COG1979	alcohol dehydrogenase
CH56_RS06490	COG0656	L-ascorbic acid biosynthetic process
CH56_RS06500	COG2132	Multicopper oxidase
CH56_RS06510	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CH56_RS06515	COG2249	NAD(P)H dehydrogenase (quinone) activity
CH56_RS06520	COG0583	DNA-binding transcription factor activity
CH56_RS06530	COG3150	esterase
CH56_RS06535	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
CH56_RS06540	COG3151	Protein conserved in bacteria
CH56_RS06545	COG0494	nUDIX hydrolase
CH56_RS06550	COG1538	Outer membrane efflux protein
CH56_RS06575	COG0754	glutathionylspermidine amidase activity
CH56_RS06580	COG3384	dioxygenase
CH56_RS06600	COG0531	amino acid
CH56_RS06615	COG3025	triphosphatase activity
CH56_RS06620	COG4991	sh3 domain protein
CH56_RS06635	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
CH56_RS06650	COG0828	Belongs to the bacterial ribosomal protein bS21 family
CH56_RS06655	COG0358	DNA primase activity
CH56_RS06735	COG0582	viral genome integration into host DNA
CH56_RS06740	COG2963	transposase activity
CH56_RS06755	COG0596	Alpha beta hydrolase
CH56_RS06775	COG0735	belongs to the Fur family
CH56_RS06835	COG0367	asparagine synthase
CH56_RS06840	COG0647	UMP catabolic process
CH56_RS06845	COG1846	Transcriptional regulator
CH56_RS06845	COG1940	carbohydrate kinase activity
CH56_RS06850	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CH56_RS06860	COG1263	PTS System
CH56_RS06860	COG2190	(PTS) system
CH56_RS06860	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CH56_RS06870	COG1609	Transcriptional regulator
CH56_RS06885	COG3037	sugar-specific permease SgaT UlaA
CH56_RS06890	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
CH56_RS06895	COG0622	Phosphoesterase
CH56_RS06905	COG1090	epimerase
CH56_RS06910	COG4598	ABC transporter
CH56_RS06915	COG4160	amino acid transport
CH56_RS06920	COG4215	(ABC) transporter
CH56_RS06925	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CH56_RS06935	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
CH56_RS06940	COG1286	toxin biosynthetic process
CH56_RS06945	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
CH56_RS06950	COG0285	dihydrofolate synthase activity
CH56_RS06960	COG0586	Pfam SNARE associated Golgi protein
CH56_RS06970	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CH56_RS06995	COG0697	spore germination
CH56_RS07010	COG1794	racemase activity, acting on amino acids and derivatives
CH56_RS07015	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CH56_RS07030	COG3101	peptidyl-lysine hydroxylation
CH56_RS07035	COG0730	response to heat
CH56_RS07050	COG2890	protein-(glutamine-N5) methyltransferase activity
CH56_RS07060	COG2062	phosphohistidine phosphatase, SixA
CH56_RS07075	COG3691	Protein conserved in bacteria
CH56_RS07090	COG3088	subunit of a heme lyase
CH56_RS07090	COG4235	cytochrome complex assembly
CH56_RS07095	COG4235	cytochrome complex assembly
CH56_RS07095	COG3088	subunit of a heme lyase
CH56_RS07100	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CH56_RS07105	COG1138	Cytochrome C-type biogenesis protein
CH56_RS07115	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CH56_RS07120	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CH56_RS07125	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CH56_RS07145	COG1704	LemA family
CH56_RS07155	COG3328	transposase activity
CH56_RS07160	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
CH56_RS07185	COG3328	transposase activity
CH56_RS07240	COG0516	GMP reductase activity
CH56_RS07240	COG0517	IMP dehydrogenase activity
CH56_RS07250	COG1645	bacterial-type flagellum-dependent swarming motility
CH56_RS07265	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CH56_RS07270	COG2976	Protein conserved in bacteria
CH56_RS07315	COG3468	outer membrane autotransporter barrel domain protein
CH56_RS07320	COG3468	outer membrane autotransporter barrel domain protein
CH56_RS07340	COG2975	iron-sulfur cluster assembly
CH56_RS07345	COG0633	Ferredoxin
CH56_RS07350	COG0443	Heat shock 70 kDa protein
CH56_RS07365	COG0822	iron-sulfur transferase activity
CH56_RS07370	COG1104	cysteine desulfurase activity
CH56_RS07390	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
CH56_RS07395	COG3683	transport system, periplasmic component
CH56_RS07400	COG3711	transcriptional antiterminator
CH56_RS07405	COG2814	Major facilitator Superfamily
CH56_RS07425	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CH56_RS07425	COG1017	nitric oxide dioxygenase activity
CH56_RS07430	COG2188	Transcriptional regulator
CH56_RS07460	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CH56_RS07500	COG1515	deoxyribonuclease V activity
CH56_RS07520	COG0151	Belongs to the GarS family
CH56_RS07570	COG1879	ABC-type sugar transport system periplasmic component
CH56_RS07575	COG1129	ABC transporter
CH56_RS07580	COG1172	Belongs to the binding-protein-dependent transport system permease family
CH56_RS07585	COG1172	Belongs to the binding-protein-dependent transport system permease family
CH56_RS07595	COG3085	chromosome segregation
CH56_RS07610	COG3978	acetolactate synthase activity
CH56_RS07615	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CH56_RS07655	COG0583	DNA-binding transcription factor activity
CH56_RS07695	COG3121	Chaperone
CH56_RS07710	COG3121	Chaperone
CH56_RS07730	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CH56_RS07755	COG3118	belongs to the thioredoxin family
CH56_RS07760	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
CH56_RS07765	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CH56_RS07770	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
CH56_RS07775	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
CH56_RS07780	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
CH56_RS07785	COG1088	dTDP-glucose 4,6-dehydratase activity
CH56_RS07790	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
CH56_RS07795	COG0456	acetyltransferase
CH56_RS07800	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
CH56_RS07805	COG2244	polysaccharide biosynthetic process
CH56_RS07825	COG1113	amino acid transport
CH56_RS07875	COG3071	HemY protein
CH56_RS07880	COG2959	enzyme of heme biosynthesis
CH56_RS07885	COG1587	Uroporphyrinogen-III synthase
CH56_RS07900	COG3072	Adenylate cyclase
CH56_RS07920	COG3159	Protein conserved in bacteria
CH56_RS07925	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
CH56_RS07930	COG1011	Hydrolase
CH56_RS07935	COG0210	DNA helicase
CH56_RS07945	COG5441	Belongs to the UPF0261 family
CH56_RS07950	COG5564	TIM-barrel signal transduction protein
CH56_RS07975	COG2050	protein possibly involved in aromatic compounds catabolism
CH56_RS07980	COG2829	1-acyl-2-lysophosphatidylserine acylhydrolase activity
CH56_RS07985	COG0514	ATP-dependent DNA helicase (RecQ)
CH56_RS07990	COG1280	lysine exporter protein (LysE YggA)
CH56_RS07995	COG1280	lysine exporter protein (LysE YggA)
CH56_RS08000	COG2267	carboxylic ester hydrolase activity
CH56_RS08005	COG0561	phosphatase activity
CH56_RS08015	COG0584	glycerophosphoryl diester phosphodiesterase
CH56_RS08020	COG3328	transposase activity
CH56_RS08025	COG0584	glycerophosphoryl diester phosphodiesterase
CH56_RS08045	COG0247	lactate metabolic process
CH56_RS08055	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
CH56_RS08070	COG3714	YhhN family
CH56_RS08085	COG3776	membrane
CH56_RS08090	COG0742	ribosomal rna small subunit methyltransferase
CH56_RS08100	COG0552	protein localization to endoplasmic reticulum
CH56_RS08100	COG0552	protein localization to endoplasmic reticulum
CH56_RS08105	COG2884	Cell division ATP-binding protein ftsE
CH56_RS08110	COG2177	Part of the ABC transporter FtsEX involved in
CH56_RS08140	COG0051	transcription antitermination factor activity, RNA binding
CH56_RS08155	COG0089	rRNA binding
CH56_RS08165	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
CH56_RS08175	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
CH56_RS08180	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
CH56_RS08190	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
CH56_RS08195	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
CH56_RS08235	COG1841	ribosomal large subunit assembly
CH56_RS08245	COG0201	protein transport
CH56_RS08250	COG0257	Belongs to the bacterial ribosomal protein bL36 family
CH56_RS08265	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
CH56_RS08280	COG0789	Transcriptional regulator
CH56_RS08285	COG3036	rescue of stalled ribosome
CH56_RS08290	COG3328	transposase activity
CH56_RS08320	COG0758	DNA mediated transformation
CH56_RS08330	COG0758	DNA mediated transformation
CH56_RS08340	COG0551	DNA topoisomerase type I activity
CH56_RS08355	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
CH56_RS08425	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
CH56_RS08430	COG2224	Isocitrate lyase
CH56_RS08435	COG2391	methyltransferase activity
CH56_RS08440	COG0425	Belongs to the sulfur carrier protein TusA family
CH56_RS08445	COG0583	DNA-binding transcription factor activity
CH56_RS08450	COG0814	amino acid
CH56_RS08455	COG0626	cystathionine gamma-synthase activity
CH56_RS08465	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CH56_RS08470	COG4558	Periplasmic binding protein
CH56_RS08475	COG3720	iron ion transport
CH56_RS08480	COG4771	TonB-dependent receptor
CH56_RS08490	COG0702	epimerase
CH56_RS08495	COG3721	Heme iron utilization protein
CH56_RS08520	COG1358	cellular component organization or biogenesis
CH56_RS08590	COG3121	Chaperone
CH56_RS08645	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
CH56_RS08655	COG0360	Binds together with S18 to 16S ribosomal RNA
CH56_RS08665	COG1073	alpha beta
CH56_RS08670	COG3650	response to hydrogen peroxide
CH56_RS08675	COG1960	acyl-CoA dehydrogenase activity
CH56_RS08695	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CH56_RS08700	COG0557	exoribonuclease II activity
CH56_RS08715	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
CH56_RS08720	COG0330	HflC and HflK could
CH56_RS08725	COG0330	HflC and HflK could
CH56_RS08730	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CH56_RS08750	COG0860	N-Acetylmuramoyl-L-alanine amidase
CH56_RS08755	COG0802	atpase or kinase
CH56_RS08760	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
CH56_RS08760	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
CH56_RS08765	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
CH56_RS08785	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
CH56_RS08805	COG3264	Mechanosensitive ion channel
CH56_RS08805	COG1511	domain protein
CH56_RS08820	COG1053	succinate dehydrogenase
CH56_RS08825	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
CH56_RS08835	COG3080	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
CH56_RS08880	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
CH56_RS08895	COG3383	formate dehydrogenase (NAD+) activity
CH56_RS08900	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
CH56_RS08905	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
CH56_RS08905	COG0493	'glutamate synthase
CH56_RS08910	COG1309	transcriptional regulator
CH56_RS08990	COG1454	alcohol dehydrogenase
CH56_RS09000	COG0629	single-stranded DNA binding
CH56_RS09005	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
CH56_RS09010	COG2315	Protein conserved in bacteria
CH56_RS09015	COG1448	Aminotransferase
CH56_RS09080	COG0564	pseudouridine synthase activity
CH56_RS09085	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
CH56_RS09135	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
CH56_RS09145	COG2966	Psort location CytoplasmicMembrane, score
CH56_RS09150	COG1280	lysine exporter protein (LysE YggA)
CH56_RS09155	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
CH56_RS09190	COG1047	Peptidyl-prolyl cis-trans
CH56_RS09205	COG0196	riboflavin kinase activity
CH56_RS09225	COG0583	DNA-binding transcription factor activity
CH56_RS09245	COG1584	GPR1 FUN34 yaaH family protein
CH56_RS09260	COG0521	Mo-molybdopterin cofactor biosynthetic process
CH56_RS09295	COG0745	RESPONSE REGULATOR receiver
CH56_RS09300	COG3045	CreA protein
CH56_RS09305	COG3708	Transcriptional regulator
CH56_RS09305	COG2207	Transcriptional regulator
CH56_RS09320	COG2973	This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon (5'- ACTAGT-'3') and prevents the initiation of transcription. The complex also regulates trp repressor biosynthesis by binding to its regulatory region
CH56_RS09325	COG0741	lytic transglycosylase activity
CH56_RS09340	COG2199	diguanylate cyclase activity
CH56_RS09345	COG2885	chlorophyll binding
CH56_RS09350	COG0488	(ABC) transporter
CH56_RS09370	COG0560	Phosphoserine phosphatase
CH56_RS09375	COG3726	membrane protein affecting hemolysin expression
CH56_RS09400	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CH56_RS09405	COG0084	hydrolase, TatD family'
CH56_RS09410	COG4667	esterase of the alpha-beta hydrolase superfamily
CH56_RS09420	COG2823	Periplasmic or secreted lipoprotein
CH56_RS09430	COG0456	acetyltransferase
CH56_RS09435	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
CH56_RS09485	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CH56_RS09490	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CH56_RS09510	COG0859	PFAM glycosyl transferase family 9
CH56_RS09565	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CH56_RS09565	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CH56_RS09565	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CH56_RS09570	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CH56_RS09575	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CH56_RS09580	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CH56_RS09585	COG2207	Transcriptional regulator
CH56_RS09595	COG4269	membrane
CH56_RS09630	COG3328	transposase activity
CH56_RS09655	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CH56_RS09660	COG4137	Cytochrome C assembly protein
CH56_RS09665	COG4536	flavin adenine dinucleotide binding
CH56_RS09680	COG4536	flavin adenine dinucleotide binding
CH56_RS09690	COG2918	glutathione biosynthetic process
CH56_RS09695	COG1238	metal cluster binding
CH56_RS09700	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CH56_RS09725	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
CH56_RS09770	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
CH56_RS09775	COG2801	Transposase and inactivated derivatives
CH56_RS09780	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
CH56_RS09785	COG3958	Transketolase
CH56_RS09790	COG3959	Transketolase, thiamine diphosphate binding domain
CH56_RS09795	COG1172	Belongs to the binding-protein-dependent transport system permease family
CH56_RS09800	COG1129	ABC transporter
CH56_RS09810	COG1879	ABC-type sugar transport system periplasmic component
CH56_RS09820	COG3783	Cytochrome b(562)
CH56_RS09825	COG3038	cytochrome b561
CH56_RS09830	COG3381	protein complex oligomerization
CH56_RS09835	COG3302	dmso reductase anchor subunit
CH56_RS09840	COG0437	4 iron, 4 sulfur cluster binding
CH56_RS09845	COG0243	molybdopterin cofactor binding
CH56_RS09850	COG0235	Class ii aldolase
CH56_RS09865	COG1129	ABC transporter
CH56_RS09870	COG1172	Belongs to the binding-protein-dependent transport system permease family
CH56_RS09875	COG1172	Belongs to the binding-protein-dependent transport system permease family
CH56_RS09880	COG3623	hexulose-6-phosphate isomerase
CH56_RS09885	COG1070	Carbohydrate kinase
CH56_RS09890	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
CH56_RS09890	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
CH56_RS09900	COG0024	Methionine aminopeptidase
CH56_RS09915	COG4771	TonB-dependent receptor
CH56_RS09925	COG1858	cytochrome C peroxidase
CH56_RS09930	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CH56_RS09950	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
CH56_RS09965	COG2376	Dihydroxyacetone kinase
CH56_RS09970	COG1028	Short-chain dehydrogenase reductase Sdr
CH56_RS09975	COG1063	alcohol dehydrogenase
CH56_RS09980	COG0698	ribose 5-phosphate isomerase
CH56_RS09995	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CH56_RS10000	COG1388	LysM domain
CH56_RS10000	COG4942	peptidase
CH56_RS10040	COG0529	Catalyzes the synthesis of activated sulfate
CH56_RS10090	COG0720	synthase
CH56_RS10095	COG0602	queuosine metabolic process
CH56_RS10115	COG3956	TIGRFAM MazG family protein
CH56_RS10125	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CH56_RS10130	COG3437	response regulator, receiver
CH56_RS10130	COG3850	Histidine kinase
CH56_RS10130	COG4999	Histidine kinase
CH56_RS10130	COG2205	protein histidine kinase activity
CH56_RS10135	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CH56_RS10155	COG2860	membrane
CH56_RS10175	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CH56_RS10180	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CH56_RS10190	COG1120	ATPase activity
CH56_RS10195	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CH56_RS10200	COG1643	Atp-dependent helicase
CH56_RS10205	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
CH56_RS10220	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CH56_RS10225	COG0617	tRNA 3'-terminal CCA addition
CH56_RS10230	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
CH56_RS10250	COG0726	polysaccharide deacetylase
CH56_RS10255	COG0842	Transport permease protein
CH56_RS10260	COG1131	(ABC) transporter
CH56_RS10265	COG0288	reversible hydration of carbon dioxide
CH56_RS10270	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
CH56_RS10285	COG2132	Multicopper oxidase
CH56_RS10305	COG0697	spore germination
CH56_RS10315	COG1049	propionate catabolic process, 2-methylcitrate cycle
CH56_RS10330	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CH56_RS10335	COG0508	dehydrogenase complex catalyzes the overall conversion of
CH56_RS10340	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
CH56_RS10345	COG2186	Transcriptional regulator
CH56_RS10350	COG1113	amino acid transport
CH56_RS10355	COG3725	Membrane protein required for beta-lactamase induction
CH56_RS10360	COG3023	N-Acetylmuramoyl-L-alanine amidase
CH56_RS10370	COG4969	Belongs to the N-Me-Phe pilin family
CH56_RS10375	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CH56_RS10380	COG1459	type II secretion system
CH56_RS10440	COG0251	oxidation-reduction process
CH56_RS10460	COG0436	Aminotransferase
CH56_RS10505	COG0395	ABC-type sugar transport system, permease component
CH56_RS10515	COG2182	Extracellular solute-binding protein
CH56_RS10520	COG1609	Transcriptional regulator
CH56_RS10525	COG3459	Glycosyltransferase 36 associated
CH56_RS10530	COG3842	ATPase activity
CH56_RS10550	COG3210	domain, Protein
CH56_RS10580	COG3210	domain, Protein
CH56_RS10590	COG2831	hemolysin activation secretion protein
CH56_RS10595	COG4245	von Willebrand factor, type A
CH56_RS10610	COG4245	von Willebrand factor, type A
CH56_RS10630	COG3247	response to pH
CH56_RS10635	COG1902	pentaerythritol trinitrate reductase activity
CH56_RS10635	COG0446	pyridine nucleotide-disulphide oxidoreductase
CH56_RS10650	COG1451	nucleotide metabolic process
CH56_RS10655	COG0673	inositol 2-dehydrogenase activity
CH56_RS10675	COG2721	sulfolactate sulfo-lyase activity
CH56_RS10695	COG2271	Major facilitator Superfamily
CH56_RS10710	COG0586	Pfam SNARE associated Golgi protein
CH56_RS10730	COG4575	ribosome binding
CH56_RS10735	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
CH56_RS10745	COG2259	Doxx family
CH56_RS10750	COG0435	Glutathione S-transferase
CH56_RS10755	COG0583	DNA-binding transcription factor activity
CH56_RS10760	COG1741	Belongs to the pirin family
CH56_RS10765	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
CH56_RS10785	COG2823	Periplasmic or secreted lipoprotein
CH56_RS10795	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
CH56_RS10805	COG0784	Response regulator, receiver
CH56_RS10805	COG5002	protein histidine kinase activity
CH56_RS10805	COG2198	Histidine kinase
CH56_RS10815	COG1242	4 iron, 4 sulfur cluster binding
CH56_RS10820	COG0069	glutamate synthase activity
CH56_RS10820	COG0067	glutamate synthase
CH56_RS10820	COG0070	glutamate synthase
CH56_RS10825	COG0493	'glutamate synthase
CH56_RS10835	COG2969	positive regulation of protein catabolic process
CH56_RS10840	COG0625	glutathione transferase activity
CH56_RS10860	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
CH56_RS10865	COG3105	Protein conserved in bacteria
CH56_RS10870	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CH56_RS10880	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CH56_RS10890	COG5007	Belongs to the BolA IbaG family
CH56_RS10895	COG3113	response to antibiotic
CH56_RS10900	COG2854	intermembrane phospholipid transfer
CH56_RS10905	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
CH56_RS10910	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
CH56_RS10915	COG1127	ABC transporter
CH56_RS10920	COG0530	calcium, potassium:sodium antiporter activity
CH56_RS10925	COG0517	IMP dehydrogenase activity
CH56_RS10925	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
CH56_RS10930	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
CH56_RS10935	COG3117	lipopolysaccharide transmembrane transporter activity
CH56_RS10940	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
CH56_RS10945	COG1137	ATPase activity
CH56_RS10950	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
CH56_RS10970	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CH56_RS10995	COG1609	Transcriptional regulator
CH56_RS11000	COG1263	PTS System
CH56_RS11000	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CH56_RS11005	COG0366	Alpha amylase catalytic
CH56_RS11010	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CH56_RS11015	COG3783	Cytochrome b(562)
CH56_RS11025	COG0312	modulator of DNA gyrase
CH56_RS11035	COG2732	(Barnase) inhibitor
CH56_RS11050	COG1012	belongs to the aldehyde dehydrogenase family
CH56_RS11070	COG0583	DNA-binding transcription factor activity
CH56_RS11130	COG0312	modulator of DNA gyrase
CH56_RS11135	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CH56_RS11140	COG3164	Protein of unknown function
CH56_RS11145	COG1530	ribonuclease E activity
CH56_RS11150	COG0424	maF-like protein
CH56_RS11155	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
CH56_RS11160	COG1792	Involved in formation and maintenance of cell shape
CH56_RS11165	COG1077	Cell shape determining protein MreB Mrl
CH56_RS11170	COG2199	diguanylate cyclase activity
CH56_RS11170	COG2200	EAL domain
CH56_RS11175	COG0604	alcohol dehydrogenase
CH56_RS11180	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
CH56_RS11195	COG0511	ligase activity, forming carbon-carbon bonds
CH56_RS11200	COG0439	Biotin carboxylase
CH56_RS11205	COG3924	membrane
CH56_RS11210	COG4145	pantothenate transmembrane transporter activity
CH56_RS11220	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CH56_RS11225	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
CH56_RS11245	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CH56_RS11255	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CH56_RS11260	COG3133	Outer membrane lipoprotein
CH56_RS11270	COG1278	Cold shock
CH56_RS11275	COG1278	Cold shock
CH56_RS11300	COG0625	glutathione transferase activity
CH56_RS11310	COG1069	ribulokinase activity
CH56_RS11320	COG1172	Belongs to the binding-protein-dependent transport system permease family
CH56_RS11325	COG1129	ABC transporter
CH56_RS11335	COG1560	Kdo2-lipid A biosynthetic process
CH56_RS11345	COG0025	NhaP-type Na H and K H
CH56_RS11350	COG2252	PERMEase
CH56_RS11355	COG3077	Addiction module antitoxin, RelB DinJ family
CH56_RS11370	COG1401	restriction endodeoxyribonuclease activity
CH56_RS11385	COG2963	transposase activity
CH56_RS11405	COG3328	transposase activity
CH56_RS11445	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CH56_RS11465	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
CH56_RS11470	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CH56_RS11475	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CH56_RS11475	COG4651	solute:proton antiporter activity
CH56_RS11480	COG2223	nitrite transmembrane transporter activity
CH56_RS11485	COG0737	Belongs to the 5'-nucleotidase family
CH56_RS11490	COG0737	Belongs to the 5'-nucleotidase family
CH56_RS11495	COG0737	Belongs to the 5'-nucleotidase family
CH56_RS11510	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CH56_RS11515	COG3735	TraB family
CH56_RS11520	COG2217	Heavy metal translocating P-type atpase
CH56_RS11525	COG0789	Transcriptional regulator
CH56_RS11530	COG1585	Membrane protein implicated in regulation of membrane protease activity
CH56_RS11535	COG0330	HflC and HflK could
CH56_RS11540	COG3118	belongs to the thioredoxin family
CH56_RS11545	COG0300	oxidoreductase activity
CH56_RS11550	COG2755	lipolytic protein G-D-S-L family
CH56_RS11555	COG4181	ATPase activity
CH56_RS11560	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
CH56_RS11565	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
CH56_RS11570	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
CH56_RS11580	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CH56_RS11600	COG2501	S4 domain
CH56_RS11645	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CH56_RS11650	COG4589	Belongs to the CDS family
CH56_RS11660	COG2267	carboxylic ester hydrolase activity
CH56_RS11665	COG2453	phosphatase
CH56_RS11665	COG0671	phosphoesterase, PA-phosphatase related
CH56_RS11720	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
CH56_RS11730	COG0735	belongs to the Fur family
CH56_RS11735	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CH56_RS11745	COG0604	alcohol dehydrogenase
CH56_RS11760	COG2198	Histidine kinase
CH56_RS11760	COG0642	Histidine kinase
CH56_RS11770	COG0784	Response regulator, receiver
CH56_RS11770	COG2205	protein histidine kinase activity
CH56_RS11800	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CH56_RS11815	COG0814	amino acid
CH56_RS11840	COG0697	spore germination
CH56_RS11850	COG1982	Orn Lys Arg decarboxylase major
CH56_RS11855	COG0531	amino acid
CH56_RS11865	COG1125	glycine betaine transport
CH56_RS11870	COG1174	glycine betaine transport
CH56_RS11875	COG1732	Glycine betaine
CH56_RS11880	COG1732	Glycine betaine
CH56_RS11885	COG2897	thiosulfate sulfurtransferase activity
CH56_RS11905	COG1122	ATPase activity
CH56_RS11925	COG4807	Protein conserved in bacteria
CH56_RS11940	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
CH56_RS11950	COG2261	transglycosylase associated protein
CH56_RS11970	COG0277	FAD linked oxidase domain protein
CH56_RS11975	COG1686	Belongs to the peptidase S11 family
CH56_RS11985	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CH56_RS12005	COG3657	addiction module killer protein
CH56_RS12065	COG0582	viral genome integration into host DNA
CH56_RS12085	COG2867	negative regulation of translational initiation
CH56_RS12095	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CH56_RS12100	COG0497	DNA recombination
CH56_RS12105	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
CH56_RS12120	COG2009	succinate dehydrogenase
CH56_RS12125	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
CH56_RS12130	COG1053	succinate dehydrogenase
CH56_RS12140	COG0567	Dehydrogenase, E1 component
CH56_RS12145	COG0508	dehydrogenase complex catalyzes the overall conversion of
CH56_RS12155	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
CH56_RS12160	COG1271	oxidase subunit
CH56_RS12165	COG1294	oxidase, subunit
CH56_RS12170	COG4890	Cyd operon protein YbgT
CH56_RS12175	COG3790	cyd operon protein YbgE
CH56_RS12190	COG0811	peptide transport
CH56_RS12195	COG0848	biopolymer transport protein
CH56_RS12200	COG3064	Membrane
CH56_RS12200	COG3064	Membrane
CH56_RS12210	COG2885	chlorophyll binding
CH56_RS12215	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
CH56_RS12240	COG1230	cation diffusion facilitator family transporter
CH56_RS12245	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CH56_RS12260	COG2017	converts alpha-aldose to the beta-anomer
CH56_RS12275	COG1085	galactose-1-phosphate uridylyltransferase
CH56_RS12280	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
CH56_RS12295	COG1119	ATPase activity
CH56_RS12300	COG3585	molybdate ion transport
CH56_RS12300	COG2005	Transcriptional regulator
CH56_RS12310	COG0725	ABC transporter, periplasmic molybdate-binding protein
CH56_RS12315	COG4149	molybdate abc transporter
CH56_RS12325	COG0561	phosphatase activity
CH56_RS12350	COG2226	methyltransferase
CH56_RS12360	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CH56_RS12370	COG4628	conserved protein (DUF2132)
CH56_RS12375	COG0391	Required for morphogenesis under gluconeogenic growth conditions
CH56_RS12385	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
CH56_RS12395	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
CH56_RS12400	COG0314	molybdopterin synthase activity
CH56_RS12405	COG0670	Belongs to the BI1 family
CH56_RS12430	COG0642	Histidine kinase
CH56_RS12430	COG2198	Histidine kinase
CH56_RS12435	COG2223	nitrite transmembrane transporter activity
CH56_RS12460	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CH56_RS12505	COG3395	kinase activity
CH56_RS12515	COG1349	DNA-binding transcription factor activity
CH56_RS12520	COG3622	Belongs to the hyi family
CH56_RS12540	COG4386	tail sheath protein
CH56_RS12580	COG3299	homolog of phage Mu protein gp47
CH56_RS12600	COG1737	Transcriptional regulator
CH56_RS12605	COG2723	6-phospho-beta-galactosidase activity
CH56_RS12625	COG3157	Type VI secretion system effector, Hcp
CH56_RS12640	COG3083	sulfuric ester hydrolase activity
CH56_RS12645	COG3082	Protein of unknown function (DUF1414)
CH56_RS12670	COG1061	Type III restriction enzyme res subunit
CH56_RS12675	COG1187	pseudouridine synthase activity
CH56_RS12680	COG2814	Major facilitator Superfamily
CH56_RS12690	COG4172	Belongs to the ABC transporter superfamily
CH56_RS12695	COG4239	(ABC) transporter, permease
CH56_RS12700	COG4174	ABC transporter (Permease)
CH56_RS12705	COG4166	transmembrane transport
CH56_RS12710	COG2200	EAL domain
CH56_RS12715	COG0791	NLP P60 protein
CH56_RS12720	COG0671	phosphoesterase, PA-phosphatase related
CH56_RS12725	COG0523	cobalamin synthesis protein
CH56_RS12735	COG2186	Transcriptional regulator
CH56_RS12740	COG0246	Mannitol dehydrogenase
CH56_RS12765	COG1028	Short-chain dehydrogenase reductase Sdr
CH56_RS12800	COG1129	ABC transporter
CH56_RS12810	COG0494	nUDIX hydrolase
CH56_RS12820	COG1105	Belongs to the carbohydrate kinase PfkB family
CH56_RS12825	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
CH56_RS12825	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CH56_RS12825	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CH56_RS12830	COG3710	Transcriptional regulator
CH56_RS12845	COG3121	Chaperone
CH56_RS12850	COG3188	usher protein
CH56_RS12860	COG2855	membrane
CH56_RS12865	COG0583	DNA-binding transcription factor activity
CH56_RS12870	COG0833	amino acid
CH56_RS12880	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CH56_RS12890	COG4771	TonB-dependent receptor
CH56_RS12895	COG0625	glutathione transferase activity
CH56_RS12920	COG2011	ABC-type metal ion transport system permease component
CH56_RS12925	COG1686	Belongs to the peptidase S11 family
CH56_RS12935	COG0814	amino acid
CH56_RS12950	COG1349	DNA-binding transcription factor activity
CH56_RS12960	COG0671	phosphoesterase, PA-phosphatase related
CH56_RS12995	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
CH56_RS13000	COG3842	ATPase activity
CH56_RS13005	COG1176	ABC-type spermidine putrescine transport system, permease component I
CH56_RS13010	COG1177	transmembrane transport
CH56_RS13025	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CH56_RS13055	COG1120	ATPase activity
CH56_RS13080	COG4160	amino acid transport
CH56_RS13085	COG4215	(ABC) transporter
CH56_RS13090	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CH56_RS13095	COG1126	abc transporter atp-binding protein
CH56_RS13100	COG1605	Chorismate mutase
CH56_RS13110	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CH56_RS13115	COG0702	epimerase
CH56_RS13120	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
CH56_RS13125	COG0028	Belongs to the TPP enzyme family
CH56_RS13130	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CH56_RS13140	COG2431	L-lysine efflux transmembrane transporter activity
CH56_RS13145	COG3593	DNA synthesis involved in DNA repair
CH56_RS13150	COG2990	Protein conserved in bacteria
CH56_RS13155	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CH56_RS13165	COG1278	Cold shock
CH56_RS13185	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
CH56_RS13195	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
CH56_RS13215	COG0492	ferredoxin-NADP+ reductase activity
CH56_RS13225	COG3107	peptidoglycan biosynthetic process
CH56_RS13225	COG1674	ftsk spoiiie
CH56_RS13235	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
CH56_RS13250	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CH56_RS13280	COG2372	response to copper ion
CH56_RS13290	COG1528	Iron-storage protein
CH56_RS13315	COG1770	oligopeptidase
CH56_RS13330	COG3141	response to X-ray
CH56_RS13335	COG0513	Belongs to the DEAD box helicase family
CH56_RS13360	COG1760	l-serine dehydratase
CH56_RS13365	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CH56_RS13370	COG2368	4-hydroxyphenylacetate
CH56_RS13385	COG3971	2-oxopent-4-enoate hydratase activity
CH56_RS13395	COG3384	dioxygenase
CH56_RS13400	COG1012	belongs to the aldehyde dehydrogenase family
CH56_RS13415	COG1846	Transcriptional regulator
CH56_RS13420	COG1253	flavin adenine dinucleotide binding
CH56_RS13425	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CH56_RS13425	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
CH56_RS13430	COG3715	PTS system
CH56_RS13455	COG5001	Diguanylate cyclase
CH56_RS13455	COG5002	protein histidine kinase activity
CH56_RS13455	COG3447	MASE1 domain protein
CH56_RS13465	COG2226	methyltransferase
CH56_RS13470	COG1496	oxidoreductase activity
CH56_RS13495	COG1113	amino acid transport
CH56_RS13530	COG2207	Transcriptional regulator
CH56_RS13540	COG1132	(ABC) transporter
CH56_RS13570	COG2223	nitrite transmembrane transporter activity
CH56_RS13590	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
CH56_RS13615	COG3122	Protein conserved in bacteria
CH56_RS13635	COG0534	Mate efflux family protein
CH56_RS13650	COG4948	Mandelate Racemase Muconate Lactonizing
CH56_RS13660	COG1028	Short-chain dehydrogenase reductase Sdr
CH56_RS13665	COG3011	Protein conserved in bacteria
CH56_RS13670	COG2271	Major facilitator Superfamily
CH56_RS13675	COG1470	cell adhesion involved in biofilm formation
CH56_RS13675	COG1388	LysM domain
CH56_RS13680	COG3328	transposase activity
CH56_RS13695	COG0628	permease
CH56_RS13725	COG3916	Acyl-homoserine-lactone synthase
CH56_RS13730	COG2771	luxR family
CH56_RS13735	COG0583	DNA-binding transcription factor activity
CH56_RS13745	COG0477	Major facilitator Superfamily
CH56_RS13755	COG0667	Aldo Keto reductase
CH56_RS13790	COG1518	maintenance of DNA repeat elements
CH56_RS13795	COG0668	transmembrane transport
CH56_RS13815	COG2152	Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man- Glc) to mannose 1-phosphate (Man1P) and glucose
CH56_RS13820	COG0395	ABC-type sugar transport system, permease component
CH56_RS13835	COG1609	Transcriptional regulator
CH56_RS13845	COG3842	ATPase activity
CH56_RS13855	COG3210	domain, Protein
CH56_RS13875	COG3210	domain, Protein
CH56_RS13895	COG3210	domain, Protein
CH56_RS13905	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CH56_RS13910	COG4638	Rieske (2fe-2S)
CH56_RS13915	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CH56_RS13925	COG0473	3-isopropylmalate dehydrogenase activity
CH56_RS13930	COG0583	DNA-binding transcription factor activity
CH56_RS13935	COG1609	Transcriptional regulator
CH56_RS13940	COG1172	Belongs to the binding-protein-dependent transport system permease family
CH56_RS13945	COG1129	ABC transporter
CH56_RS13950	COG1879	ABC-type sugar transport system periplasmic component
CH56_RS13955	COG1063	alcohol dehydrogenase
CH56_RS13975	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
CH56_RS14005	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CH56_RS14010	COG0765	amino acid transport
CH56_RS14015	COG1126	abc transporter atp-binding protein
CH56_RS14035	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CH56_RS14050	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
CH56_RS14065	COG1169	isochorismate synthase
CH56_RS14075	COG4575	ribosome binding
CH56_RS14090	COG0129	dihydroxy-acid dehydratase activity
CH56_RS14105	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CH56_RS14115	COG1609	Transcriptional regulator
CH56_RS14120	COG1649	PFAM Uncharacterised BCR, COG1649
CH56_RS14125	COG1028	Short-chain dehydrogenase reductase Sdr
CH56_RS14130	COG3265	gluconokinase activity
CH56_RS14135	COG2731	YhcH YjgK YiaL family protein
CH56_RS14150	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CH56_RS14155	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
CH56_RS14165	COG0839	Belongs to the complex I subunit 6 family
CH56_RS14180	COG1034	ATP synthesis coupled electron transport
CH56_RS14200	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CH56_RS14210	COG0583	DNA-binding transcription factor activity
CH56_RS14220	COG0436	Aminotransferase
CH56_RS14235	COG0490	domain, Protein
CH56_RS14235	COG0471	metal ion transport
CH56_RS14240	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CH56_RS14265	COG0857	belongs to the CobB CobQ family
CH56_RS14265	COG0280	phosphate acetyltransferase
CH56_RS14280	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CH56_RS14290	COG1702	phosphate starvation-inducible protein PhoH
CH56_RS14300	COG4535	Mg2 and Co2 transporter CorC
CH56_RS14305	COG0815	Transfers the fatty acyl group on membrane lipoproteins
CH56_RS14330	COG0765	amino acid transport
CH56_RS14335	COG1126	abc transporter atp-binding protein
CH56_RS14340	COG2888	peptidyl-tyrosine sulfation
CH56_RS14355	COG1466	dna polymerase III delta subunit
CH56_RS14365	COG0799	negative regulation of ribosome biogenesis
CH56_RS14375	COG0768	penicillin binding
CH56_RS14380	COG0772	Belongs to the SEDS family
CH56_RS14385	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
CH56_RS14390	COG1686	Belongs to the peptidase S11 family
CH56_RS14410	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CH56_RS14420	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CH56_RS14430	COG1278	Cold shock
CH56_RS14435	COG2197	response regulator
CH56_RS14460	COG5265	(ABC) transporter
CH56_RS14470	COG3718	enzyme involved in inositol metabolism
CH56_RS14480	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CH56_RS14485	COG0673	inositol 2-dehydrogenase activity
CH56_RS14490	COG1172	Belongs to the binding-protein-dependent transport system permease family
CH56_RS14495	COG1129	ABC transporter
CH56_RS14510	COG3962	Belongs to the TPP enzyme family
CH56_RS14530	COG2373	Large extracellular alpha-helical protein
CH56_RS14535	COG4953	penicillin-binding protein 1C
CH56_RS14540	COG3423	Transcriptional regulator
CH56_RS14590	COG2850	peptidyl-arginine hydroxylation
CH56_RS14630	COG0656	L-ascorbic acid biosynthetic process
CH56_RS14635	COG0667	Aldo Keto reductase
CH56_RS14670	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
CH56_RS14695	COG1739	Uncharacterized protein family UPF0029
CH56_RS14700	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
CH56_RS14705	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
CH56_RS14740	COG3328	transposase activity
CH56_RS14750	COG2824	Alkylphosphonate utilization operon protein PhnA
CH56_RS14790	COG3328	transposase activity
CH56_RS14810	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CH56_RS14825	COG1067	ATP-dependent peptidase activity
CH56_RS14845	COG1882	Formate acetyltransferase
CH56_RS14850	COG2116	formate transmembrane transporter activity
CH56_RS14855	COG1944	ATP diphosphatase activity
CH56_RS14860	COG0252	asparaginase activity
CH56_RS14865	COG5295	Hep Hag repeat protein
CH56_RS14865	COG5295	Hep Hag repeat protein
CH56_RS14890	COG0539	negative regulation of cytoplasmic translation
CH56_RS14905	COG2333	competence protein COMEC
CH56_RS14905	COG0658	competence protein
CH56_RS14920	COG5383	Protein conserved in bacteria
CH56_RS14930	COG1278	Cold shock
CH56_RS14945	COG3173	Aminoglycoside phosphotransferase
CH56_RS14955	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
CH56_RS14985	COG2989	Protein conserved in bacteria
CH56_RS14990	COG3108	Peptidase M15
CH56_RS14995	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CH56_RS15000	COG1448	Aminotransferase
CH56_RS15025	COG0308	aminopeptidase N
CH56_RS15040	COG0633	Ferredoxin
CH56_RS15040	COG3217	Mosc domain protein beta barrel domain protein
CH56_RS15050	COG0488	(ABC) transporter
CH56_RS15055	COG2995	paraquat-inducible protein a
CH56_RS15060	COG3008	intermembrane lipid transfer
CH56_RS15060	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
CH56_RS15065	COG3009	Protein conserved in bacteria
CH56_RS15075	COG3130	regulation of translation
CH56_RS15100	COG2747	anti-sigma28 factor FlgM
CH56_RS15110	COG1815	bacterial-type flagellum-dependent cell motility
CH56_RS15115	COG1558	bacterial-type flagellum-dependent cell motility
CH56_RS15155	COG1256	bacterial-type flagellum assembly
CH56_RS15175	COG1157	protein secretion by the type III secretion system
CH56_RS15195	COG1677	Flagellar hook-basal body complex protein FliE
CH56_RS15210	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
CH56_RS15215	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
CH56_RS15220	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
CH56_RS15280	COG1191	sigma factor activity
CH56_RS15295	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CH56_RS15300	COG0765	amino acid transport
CH56_RS15305	COG1126	abc transporter atp-binding protein
CH56_RS15320	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
CH56_RS15320	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
CH56_RS15320	COG0506	proline dehydrogenase activity
CH56_RS15335	COG0672	)-iron permease
CH56_RS15340	COG2822	iron ion transport
CH56_RS15360	COG1113	amino acid transport
CH56_RS15385	COG3136	membrane protein required for alginate biosynthesis
CH56_RS15395	COG2197	response regulator
CH56_RS15535	COG2188	Transcriptional regulator
CH56_RS15545	COG0673	inositol 2-dehydrogenase activity
CH56_RS15555	COG1175	transmembrane transport
CH56_RS15560	COG0395	ABC-type sugar transport system, permease component
CH56_RS15565	COG3842	ATPase activity
CH56_RS15640	COG4771	TonB-dependent receptor
CH56_RS15645	COG1021	2,3-dihydroxybenzoate-AMP ligase
CH56_RS15665	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CH56_RS15665	COG3433	isochorismatase activity
CH56_RS15665	COG2226	methyltransferase
CH56_RS15680	COG1132	(ABC) transporter
CH56_RS15685	COG2814	Major facilitator Superfamily
CH56_RS15690	COG1169	isochorismate synthase
CH56_RS15695	COG0582	viral genome integration into host DNA
CH56_RS15705	COG3121	Chaperone
CH56_RS15715	COG3188	usher protein
CH56_RS15740	COG0427	acetyl-CoA hydrolase
CH56_RS15745	COG2030	dehydratase
CH56_RS15770	COG2814	Major facilitator Superfamily
CH56_RS15785	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
CH56_RS15790	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CH56_RS15800	COG1349	DNA-binding transcription factor activity
CH56_RS15810	COG2066	Belongs to the glutaminase family
CH56_RS15820	COG0672	)-iron permease
CH56_RS15840	COG1136	(ABC) transporter
CH56_RS15840	COG0577	efflux transmembrane transporter activity
CH56_RS15860	COG0006	proline dipeptidase activity
CH56_RS15865	COG0457	Tetratricopeptide repeat
CH56_RS15870	COG0726	polysaccharide deacetylase
CH56_RS15870	COG1649	PFAM Uncharacterised BCR, COG1649
CH56_RS15875	COG1215	transferase activity, transferring glycosyl groups
CH56_RS15880	COG3658	cytochrome
CH56_RS15895	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
CH56_RS15900	COG2350	Protein conserved in bacteria
CH56_RS15945	COG4608	Belongs to the ABC transporter superfamily
CH56_RS15950	COG0444	Belongs to the ABC transporter superfamily
CH56_RS15955	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CH56_RS15960	COG0601	transmembrane transport
CH56_RS15970	COG2095	MarC family integral membrane protein
CH56_RS15975	COG1454	alcohol dehydrogenase
CH56_RS15975	COG1012	belongs to the aldehyde dehydrogenase family
CH56_RS16105	COG3328	transposase activity
CH56_RS16200	COG0657	acetylesterase activity
CH56_RS16220	COG1285	pathogenesis
CH56_RS16225	COG3042	response to heat
CH56_RS16230	COG3187	Heat shock protein
CH56_RS16235	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CH56_RS16240	COG2911	Protein conserved in bacteria
CH56_RS16250	COG3784	Protein of unknown function (DUF1318)
CH56_RS16255	COG0246	Mannitol dehydrogenase
CH56_RS16260	COG2390	Transcriptional regulator
CH56_RS16285	COG3591	Belongs to the peptidase S1B family
CH56_RS16300	COG3038	cytochrome b561
CH56_RS16335	COG0583	DNA-binding transcription factor activity
CH56_RS16345	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
CH56_RS16355	COG0671	phosphoesterase, PA-phosphatase related
CH56_RS16360	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
CH56_RS16365	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
CH56_RS16380	COG0023	Translation Initiation Factor
CH56_RS16400	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
CH56_RS16405	COG2879	small protein
CH56_RS16410	COG1966	Carbon starvation protein
CH56_RS16420	COG2271	Major facilitator Superfamily
CH56_RS16425	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CH56_RS16430	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CH56_RS16440	COG4659	FMN binding
CH56_RS16445	COG4658	electron transport chain
CH56_RS16480	COG1132	(ABC) transporter
CH56_RS16490	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CH56_RS16495	COG2274	protein secretion by the type I secretion system
CH56_RS16510	COG1879	ABC-type sugar transport system periplasmic component
CH56_RS16515	COG1129	ABC transporter
CH56_RS16520	COG1172	Belongs to the binding-protein-dependent transport system permease family
CH56_RS16530	COG0673	inositol 2-dehydrogenase activity
CH56_RS16535	COG0385	Bile acid
CH56_RS16545	COG5339	Protein conserved in bacteria
CH56_RS16555	COG0114	fumarate hydratase activity
CH56_RS16565	COG1609	Transcriptional regulator
CH56_RS16625	COG0440	acetolactate synthase activity
CH56_RS16630	COG1011	Hydrolase
CH56_RS16650	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CH56_RS16655	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CH56_RS16665	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
CH56_RS16670	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
CH56_RS16685	COG0531	amino acid
CH56_RS16695	COG0745	RESPONSE REGULATOR receiver
CH56_RS16705	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
CH56_RS16735	COG0616	signal peptide processing
CH56_RS16740	COG1028	Short-chain dehydrogenase reductase Sdr
CH56_RS16750	COG1187	pseudouridine synthase activity
CH56_RS16755	COG0009	L-threonylcarbamoyladenylate synthase
CH56_RS16780	COG0512	Glutamine amidotransferase of anthranilate synthase
CH56_RS16790	COG0134	indole-3-glycerol-phosphate synthase activity
CH56_RS16790	COG0135	phosphoribosylanthranilate isomerase activity
CH56_RS16825	COG3047	cAMP biosynthetic process
CH56_RS16860	COG3328	transposase activity
CH56_RS16870	COG0745	RESPONSE REGULATOR receiver
CH56_RS16890	COG0788	formyltetrahydrofolate deformylase activity
CH56_RS16900	COG3328	transposase activity
CH56_RS16910	COG0708	Exodeoxyribonuclease III
CH56_RS16915	COG0494	nUDIX hydrolase
CH56_RS16925	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CH56_RS16930	COG0709	Synthesizes selenophosphate from selenide and ATP
CH56_RS16935	COG0778	Nitroreductase
CH56_RS16940	COG0616	signal peptide processing
CH56_RS16945	COG0252	asparaginase activity
CH56_RS16950	COG1335	isochorismatase
CH56_RS16955	COG3139	Protein of unknown function (DUF1315)
CH56_RS16975	COG3713	MltA-interacting MipA family protein
CH56_RS16980	COG2766	serine protein kinase
CH56_RS16995	COG0583	DNA-binding transcription factor activity
CH56_RS17005	COG2814	Major facilitator Superfamily
CH56_RS17015	COG2719	SpoVR family
CH56_RS17045	COG1104	cysteine desulfurase activity
CH56_RS17150	COG4948	Mandelate Racemase Muconate Lactonizing
CH56_RS17160	COG4166	transmembrane transport
CH56_RS17180	COG0582	viral genome integration into host DNA
CH56_RS17190	COG0179	Fumarylacetoacetate (FAA) hydrolase
CH56_RS17195	COG2951	lytic endotransglycosylase activity
CH56_RS17210	COG2894	cell division
CH56_RS17215	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
CH56_RS17220	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
CH56_RS17225	COG0318	PFAM AMP-dependent synthetase and ligase
CH56_RS17230	COG3065	identical protein binding
CH56_RS17240	COG1199	ATP-dependent helicase activity
CH56_RS17245	COG0251	oxidation-reduction process
CH56_RS17260	COG0800	Aldolase
CH56_RS17270	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CH56_RS17275	COG1737	Transcriptional regulator
CH56_RS17280	COG0469	pyruvate kinase activity
CH56_RS17285	COG1560	Kdo2-lipid A biosynthetic process
CH56_RS17290	COG0739	heme binding
CH56_RS17295	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
CH56_RS17305	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CH56_RS17330	COG0494	nUDIX hydrolase
CH56_RS17340	COG1801	Protein of unknown function DUF72
CH56_RS17345	COG3788	relative of glutathione S-transferase, MAPEG superfamily
CH56_RS17365	COG3102	Protein conserved in bacteria
CH56_RS17390	COG0728	peptidoglycan biosynthetic process
CH56_RS17405	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CH56_RS17420	COG3381	protein complex oligomerization
CH56_RS17440	COG1176	ABC-type spermidine putrescine transport system, permease component I
CH56_RS17445	COG3833	ABC-type maltose transport systems, permease component
CH56_RS17470	COG0659	secondary active sulfate transmembrane transporter activity
CH56_RS17495	COG2890	protein-(glutamine-N5) methyltransferase activity
CH56_RS17525	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CH56_RS17545	COG0012	GTP binding
CH56_RS17610	COG5002	protein histidine kinase activity
CH56_RS17650	COG0500	methyltransferase
CH56_RS17675	COG3328	transposase activity
CH56_RS17725	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CH56_RS17730	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CH56_RS17735	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CH56_RS17750	COG0402	S-adenosylhomocysteine deaminase activity
CH56_RS17805	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CH56_RS17810	COG3850	Histidine kinase
CH56_RS17815	COG0387	Pfam Sodium calcium exchanger
CH56_RS17845	COG5642	Protein of unknown function (DUF2384)
CH56_RS17850	COG5654	RES domain protein
CH56_RS17860	COG3106	COG3106 Predicted ATPase
CH56_RS17870	COG1983	PspC domain protein
CH56_RS17880	COG1842	Phage shock protein A
CH56_RS17885	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
CH56_RS17900	COG4166	transmembrane transport
CH56_RS17905	COG4168	peptide transport system, permease
CH56_RS17910	COG4171	peptide transport system, permease
CH56_RS17920	COG4172	Belongs to the ABC transporter superfamily
CH56_RS17925	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CH56_RS17925	COG4950	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CH56_RS17930	COG3104	oligopeptide transport
CH56_RS17945	COG3328	transposase activity
CH56_RS17950	COG0625	glutathione transferase activity
CH56_RS17970	COG3895	Periplasmic Protein
CH56_RS17980	COG3133	Outer membrane lipoprotein
CH56_RS17995	COG4989	oxidoreductase activity
CH56_RS18000	COG3313	Fe-S protein
CH56_RS18005	COG2194	sulfuric ester hydrolase activity
CH56_RS18010	COG1309	transcriptional regulator
CH56_RS18015	COG1902	pentaerythritol trinitrate reductase activity
CH56_RS18025	COG0346	lactoylglutathione lyase activity
CH56_RS18030	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CH56_RS18035	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
CH56_RS18045	COG0791	NLP P60 protein
CH56_RS18060	COG0583	DNA-binding transcription factor activity
CH56_RS18065	COG2814	Major facilitator Superfamily
CH56_RS18070	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CH56_RS18085	COG0307	riboflavin synthase, alpha
CH56_RS18125	COG3328	transposase activity
CH56_RS18140	COG1388	LysM domain
CH56_RS18140	COG1376	ErfK ybiS ycfS ynhG family protein
CH56_RS18155	COG0719	Fe-S assembly protein
CH56_RS18160	COG0396	ATPase activity
CH56_RS18165	COG0719	Fe-S assembly protein
CH56_RS18170	COG0316	Belongs to the HesB IscA family
CH56_RS18180	COG2050	protein possibly involved in aromatic compounds catabolism
CH56_RS18185	COG0277	FAD linked oxidase domain protein
CH56_RS18185	COG0247	lactate metabolic process
CH56_RS18190	COG0628	permease
CH56_RS18200	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CH56_RS18200	COG0574	Belongs to the PEP-utilizing enzyme family
CH56_RS18225	COG0791	NLP P60 protein
CH56_RS18275	COG0386	Belongs to the glutathione peroxidase family
CH56_RS18295	COG0776	regulation of translation
CH56_RS18300	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CH56_RS18300	COG0072	phenylalanine-tRNA ligase activity
CH56_RS18330	COG4249	Peptidase C14 caspase catalytic subunit p20
CH56_RS18355	COG0803	Belongs to the bacterial solute-binding protein 9 family
CH56_RS18360	COG1121	(ABC) transporter
CH56_RS18365	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CH56_RS18370	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CH56_RS18380	COG3001	Fructosamine kinase
CH56_RS18395	COG3328	transposase activity
CH56_RS18400	COG1917	Cupin 2, conserved barrel domain protein
CH56_RS18410	COG1028	Short-chain dehydrogenase reductase Sdr
CH56_RS18420	COG1175	transmembrane transport
CH56_RS18425	COG0395	ABC-type sugar transport system, permease component
CH56_RS18430	COG3842	ATPase activity
CH56_RS18435	COG1653	transport
CH56_RS18440	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
CH56_RS18445	COG1988	membrane-bound metal-dependent
CH56_RS18450	COG1823	symporter activity
CH56_RS18455	COG3023	N-Acetylmuramoyl-L-alanine amidase
CH56_RS18465	COG0823	Involved in the tonB-independent uptake of proteins
CH56_RS18470	COG2814	Major facilitator Superfamily
CH56_RS18475	COG3121	Chaperone
CH56_RS18490	COG3121	Chaperone
CH56_RS18495	COG3539	Fimbrial protein
CH56_RS18515	COG0793	Belongs to the peptidase S41A family
CH56_RS18525	COG1956	GAF domain-containing protein
CH56_RS18530	COG2995	paraquat-inducible protein a
CH56_RS18535	COG3008	intermembrane lipid transfer
CH56_RS18555	COG3121	Chaperone
CH56_RS18595	COG1953	Uracil, thiamine, allantoin
CH56_RS18615	COG2226	methyltransferase
CH56_RS18620	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CH56_RS18625	COG1388	LysM domain
CH56_RS18625	COG0741	lytic transglycosylase activity
CH56_RS18640	COG0656	L-ascorbic acid biosynthetic process
CH56_RS18660	COG3188	usher protein
CH56_RS18665	COG3121	Chaperone
CH56_RS18725	COG2951	lytic endotransglycosylase activity
CH56_RS18760	COG0243	molybdopterin cofactor binding
CH56_RS18765	COG0437	4 iron, 4 sulfur cluster binding
CH56_RS18770	COG3302	dmso reductase anchor subunit
CH56_RS18775	COG3381	protein complex oligomerization
CH56_RS18805	COG3038	cytochrome b561
CH56_RS18810	COG0436	Aminotransferase
CH56_RS18835	COG0667	Aldo Keto reductase
CH56_RS18890	COG3530	Putative quorum-sensing-regulated virulence factor
CH56_RS18905	COG2981	High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway
CH56_RS18915	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CH56_RS18940	COG2205	protein histidine kinase activity
CH56_RS18945	COG0745	RESPONSE REGULATOR receiver
CH56_RS18950	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CH56_RS18965	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CH56_RS18985	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
CH56_RS19000	COG0745	RESPONSE REGULATOR receiver
CH56_RS19015	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
CH56_RS19020	COG4208	sulfate ABC transporter
CH56_RS19025	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
CH56_RS19030	COG4150	thiosulfate binding
CH56_RS19040	COG1737	Transcriptional regulator
CH56_RS19050	COG2731	YhcH YjgK YiaL family protein
CH56_RS19060	COG4886	Leucine-rich repeat (LRR) protein
CH56_RS19070	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CH56_RS19075	COG2837	iron assimilation
CH56_RS19085	COG3111	PFAM Bacterial OB fold (BOF) protein
CH56_RS19130	COG3005	denitrification pathway
CH56_RS19135	COG3043	anaerobic respiration
CH56_RS19145	COG3062	negative regulation of establishment of protein localization
CH56_RS19150	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
CH56_RS19150	COG1149	4fe-4S ferredoxin, iron-sulfur binding domain protein
CH56_RS19155	COG2197	response regulator
CH56_RS19165	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CH56_RS19215	COG0250	Participates in transcription elongation, termination and antitermination
CH56_RS19265	COG0537	adenosine 5'-monophosphoramidase activity
CH56_RS19270	COG5633	Lipoprotein
CH56_RS19285	COG1472	Belongs to the glycosyl hydrolase 3 family
CH56_RS19295	COG1252	NADH dehydrogenase
CH56_RS19305	COG3328	transposase activity
CH56_RS19310	COG2271	Major facilitator Superfamily
CH56_RS19315	COG0835	chemotaxis
CH56_RS19320	COG2198	Histidine kinase
CH56_RS19320	COG0643	Histidine kinase
CH56_RS19325	COG1360	Flagellar Motor Protein
CH56_RS19350	COG1285	pathogenesis
CH56_RS19380	COG3321	synthase
CH56_RS19380	COG1028	Short-chain dehydrogenase reductase Sdr
CH56_RS19380	COG0604	alcohol dehydrogenase
CH56_RS19390	COG1522	sequence-specific DNA binding
CH56_RS19415	COG1733	regulation of RNA biosynthetic process
CH56_RS19420	COG0702	epimerase
CH56_RS19425	COG0840	transmembrane signaling receptor activity
CH56_RS19440	COG0538	isocitrate dehydrogenase activity
CH56_RS19445	COG1187	pseudouridine synthase activity
CH56_RS19465	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
CH56_RS19475	COG0745	RESPONSE REGULATOR receiver
CH56_RS19485	COG2850	peptidyl-arginine hydroxylation
CH56_RS19500	COG1940	carbohydrate kinase activity
CH56_RS19505	COG4591	ABC-type transport system involved in lipoprotein release permease component
CH56_RS19515	COG4591	ABC-type transport system involved in lipoprotein release permease component
CH56_RS19520	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
CH56_RS19525	COG3134	Outer membrane lipoprotein
CH56_RS19530	COG3328	transposase activity
CH56_RS19535	COG3188	usher protein
CH56_RS19590	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CH56_RS19595	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CH56_RS19600	COG1309	transcriptional regulator
CH56_RS19605	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
CH56_RS19610	COG3264	Mechanosensitive ion channel
CH56_RS19610	COG1196	nuclear chromosome segregation
CH56_RS19635	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CH56_RS19665	COG0543	2 iron, 2 sulfur cluster binding
CH56_RS19665	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CH56_RS19690	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CH56_RS19705	COG3137	Salt-induced outer membrane protein
CH56_RS19735	COG0494	nUDIX hydrolase
CH56_RS19760	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
CH56_RS19765	COG0849	cell division
CH56_RS19770	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
CH56_RS19790	COG0772	Belongs to the SEDS family
CH56_RS19805	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
CH56_RS19810	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CH56_RS19815	COG0768	penicillin binding
CH56_RS19820	COG3116	cell division
CH56_RS19840	COG1609	Transcriptional regulator
CH56_RS19860	COG0028	Belongs to the TPP enzyme family
CH56_RS19870	COG1022	Amp-dependent synthetase and ligase
CH56_RS19905	COG0473	3-isopropylmalate dehydrogenase activity
CH56_RS19920	COG2814	Major facilitator Superfamily
CH56_RS19940	COG4143	(ABC) transporter
CH56_RS19945	COG1178	ABC-type Fe3 transport system permease component
CH56_RS19950	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
CH56_RS19955	COG0586	Pfam SNARE associated Golgi protein
CH56_RS19960	COG0417	DNA replication proofreading
CH56_RS19990	COG3047	cAMP biosynthetic process
CH56_RS19990	COG2885	chlorophyll binding
CH56_RS20050	COG1028	Short-chain dehydrogenase reductase Sdr
CH56_RS20060	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
CH56_RS20065	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CH56_RS20070	COG1028	Short-chain dehydrogenase reductase Sdr
CH56_RS20075	COG3425	synthase
CH56_RS20085	COG1024	Enoyl-CoA hydratase
CH56_RS20090	COG1028	Short-chain dehydrogenase reductase Sdr
CH56_RS20100	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CH56_RS20105	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
CH56_RS20220	COG0488	(ABC) transporter
CH56_RS20235	COG0303	'Molybdopterin
CH56_RS20245	COG1136	(ABC) transporter
CH56_RS20260	COG3328	transposase activity
CH56_RS20290	COG0583	DNA-binding transcription factor activity
CH56_RS20305	COG2311	Membrane
CH56_RS20320	COG4211	Belongs to the binding-protein-dependent transport system permease family
CH56_RS20330	COG2949	membrane
CH56_RS20345	COG1346	cytolysis
CH56_RS20355	COG2814	Major facilitator Superfamily
CH56_RS20390	COG0257	Belongs to the bacterial ribosomal protein bL36 family
CH56_RS20410	COG3695	enzyme binding
CH56_RS20415	COG3126	Type III secretion system lipoprotein chaperone (YscW)
CH56_RS20420	COG1946	Acyl-CoA thioesterase
CH56_RS20425	COG0004	ammonium transporteR
CH56_RS20430	COG0347	Belongs to the P(II) protein family
CH56_RS20435	COG1132	(ABC) transporter
CH56_RS20440	COG1132	(ABC) transporter
CH56_RS20445	COG1522	sequence-specific DNA binding
CH56_RS20460	COG4533	DNA binding
CH56_RS20470	COG0824	Thioesterase
CH56_RS20475	COG1555	photosystem II stabilization
CH56_RS20480	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CH56_RS20495	COG0776	regulation of translation
CH56_RS20500	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
CH56_RS20525	COG0271	Belongs to the BolA IbaG family
CH56_RS20530	COG3056	Lipoprotein
CH56_RS20535	COG2223	nitrite transmembrane transporter activity
CH56_RS20545	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
CH56_RS20550	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CH56_RS20555	COG1845	cytochrome c oxidase, subunit III
CH56_RS20560	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
CH56_RS20575	COG2814	Major facilitator Superfamily
CH56_RS20585	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CH56_RS20590	COG0693	protein deglycase activity
CH56_RS20610	COG0142	geranyltranstransferase activity
CH56_RS20630	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CH56_RS20640	COG1172	Belongs to the binding-protein-dependent transport system permease family
CH56_RS20645	COG1129	ABC transporter
CH56_RS20650	COG1129	ABC transporter
CH56_RS20655	COG0371	Dehydrogenase
CH56_RS20665	COG0531	amino acid
CH56_RS20670	COG2925	Exonuclease
CH56_RS20685	COG3328	transposase activity
CH56_RS20700	COG0351	phosphomethylpyrimidine kinase
CH56_RS20720	COG0826	peptidase U32
CH56_RS20725	COG3422	double-strand break repair
CH56_RS20730	COG0745	RESPONSE REGULATOR receiver
CH56_RS20735	COG2205	protein histidine kinase activity
CH56_RS20760	COG3842	ATPase activity
CH56_RS20770	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CH56_RS20780	COG1176	ABC-type spermidine putrescine transport system, permease component I
CH56_RS20785	COG1177	transmembrane transport
CH56_RS20790	COG0443	Heat shock 70 kDa protein
CH56_RS20795	COG2239	Acts as a magnesium transporter
CH56_RS20810	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
CH56_RS20820	COG0581	inorganic phosphate transmembrane transporter activity
CH56_RS20840	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CH56_RS20845	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
CH56_RS20860	COG2801	Transposase and inactivated derivatives
CH56_RS20880	COG1393	Belongs to the ArsC family
CH56_RS20885	COG4783	chaperone-mediated protein folding
CH56_RS20890	COG0628	permease
CH56_RS20910	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
CH56_RS20915	COG2716	regulation of RNA biosynthetic process
CH56_RS20925	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
CH56_RS20945	COG2321	neutral zinc metallopeptidase
CH56_RS20965	COG1876	peptidase activity
CH56_RS20975	COG1393	Belongs to the ArsC family
CH56_RS20990	COG1175	transmembrane transport
CH56_RS20995	COG3842	ATPase activity
CH56_RS21000	COG3119	arylsulfatase activity
CH56_RS21005	COG0641	radical SAM
CH56_RS21010	COG1988	membrane-bound metal-dependent
CH56_RS21035	COG1611	Belongs to the LOG family
CH56_RS21070	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CH56_RS21070	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CH56_RS21085	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
CH56_RS21090	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
CH56_RS21115	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
CH56_RS21125	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
CH56_RS21125	COG0131	Imidazoleglycerol-phosphate dehydratase
CH56_RS21145	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
CH56_RS21145	COG0140	phosphoribosyl-ATP diphosphatase activity
CH56_RS21155	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CH56_RS21160	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CH56_RS21175	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CH56_RS21180	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CH56_RS21185	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CH56_RS21190	COG1120	ATPase activity
CH56_RS21205	COG3486	L-lysine 6-monooxygenase (NADPH) activity
CH56_RS21210	COG0076	glutamate decarboxylase activity
CH56_RS21215	COG4114	ferric iron reductase
CH56_RS21220	COG1253	flavin adenine dinucleotide binding
CH56_RS21225	COG2982	Protein involved in outer membrane biogenesis
CH56_RS21240	COG0489	protein tyrosine kinase activity
CH56_RS21270	COG3070	regulator of competence-specific genes
CH56_RS21275	COG1289	transmembrane transporter activity
CH56_RS21280	COG3304	Inner membrane component domain
CH56_RS21285	COG0210	DNA helicase
CH56_RS21300	COG1832	CoA-binding protein
CH56_RS21320	COG2920	part of a sulfur-relay system
CH56_RS21375	COG2363	Small membrane protein
CH56_RS21380	COG0583	DNA-binding transcription factor activity
CH56_RS21385	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CH56_RS21390	COG2166	iron-sulfur cluster assembly
CH56_RS21395	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
CH56_RS21400	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
CH56_RS21415	COG0860	N-Acetylmuramoyl-L-alanine amidase
CH56_RS21425	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
CH56_RS21430	COG1074	ATP-dependent DNA helicase activity
CH56_RS21440	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
CH56_RS21505	COG0667	Aldo Keto reductase
CH56_RS21535	COG1609	Transcriptional regulator
CH56_RS21545	COG0583	DNA-binding transcription factor activity
CH56_RS21550	COG2814	Major facilitator Superfamily
CH56_RS21555	COG0583	DNA-binding transcription factor activity
CH56_RS21570	COG0840	transmembrane signaling receptor activity
CH56_RS21635	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CH56_RS21655	COG0288	reversible hydration of carbon dioxide
CH56_RS21695	COG0366	Alpha amylase catalytic
CH56_RS21715	COG5002	protein histidine kinase activity
CH56_RS21720	COG0745	RESPONSE REGULATOR receiver
CH56_RS21730	COG0420	3'-5' exonuclease activity
CH56_RS21735	COG0419	ATPase involved in DNA repair
CH56_RS21740	COG1940	carbohydrate kinase activity
CH56_RS21775	COG2226	methyltransferase
CH56_RS21905	COG2195	Cleaves the N-terminal amino acid of tripeptides
CH56_RS22010	COG3914	O-linked N-acetylglucosamine transferase SPINDLY family
CH56_RS22105	COG0436	Aminotransferase
CH56_RS22195	COG1166	arginine decarboxylase activity
CH56_RS22205	COG1166	arginine decarboxylase activity