YPA_RS00005 IPR001094 Flavodoxin YPA_RS00005 IPR008254 Flavodoxin/nitric oxide synthase YPA_RS00005 IPR029039 Flavoprotein-like YPA_RS00010 IPR000485 AsnC-type HTH domain YPA_RS00010 IPR011008 Dimeric alpha-beta barrel YPA_RS00010 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS00010 IPR019887 Transcription regulator AsnC-type, C-terminal YPA_RS00010 IPR019888 Transcription regulator AsnC-type YPA_RS00015 IPR004618 Aspartate--ammonia ligase YPA_RS00020 IPR002035 von Willebrand factor, type A YPA_RS00020 IPR008912 Uncharacterised protein family CoxE-like YPA_RS00020 IPR023481 Uncharacterised protein family ViaA YPA_RS00025 IPR003593 AAA+ ATPase domain YPA_RS00025 IPR011704 ATPase, dynein-related, AAA domain YPA_RS00025 IPR022547 ATPase, RavA, C-terminal YPA_RS00025 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS00030 IPR001584 Integrase, catalytic core YPA_RS00030 IPR006120 Resolvase, HTH domain YPA_RS00030 IPR009057 Homeodomain-like YPA_RS00030 IPR012337 Ribonuclease H-like domain YPA_RS00035 IPR001270 ClpA/B family YPA_RS00035 IPR002611 IstB-like ATP-binding protein YPA_RS00035 IPR003593 AAA+ ATPase domain YPA_RS00035 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS00035 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS00040 IPR003855 K+ potassium transporter YPA_RS00040 IPR023051 Potassium uptake protein, low affinity, Kup YPA_RS00045 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU YPA_RS00045 IPR023064 D-ribose pyranase YPA_RS00045 IPR023750 RbsD-like domain YPA_RS00050 IPR002139 Ribokinase YPA_RS00050 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YPA_RS00050 IPR011611 Carbohydrate kinase PfkB YPA_RS00050 IPR011877 Ribokinase, bacterial YPA_RS00050 IPR029056 Ribokinase-like YPA_RS00060 IPR004638 Drug resistance transporter EmrB/QacA subfamily YPA_RS00060 IPR011701 Major facilitator superfamily YPA_RS00060 IPR020846 Major facilitator superfamily domain YPA_RS00065 IPR000524 Transcription regulator HTH, GntR YPA_RS00065 IPR008920 Transcription regulator FadR/GntR, C-terminal YPA_RS00065 IPR011711 GntR, C-terminal YPA_RS00065 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS00105 IPR005697 Homoserine O-succinyltransferase YPA_RS00105 IPR029062 Class I glutamine amidotransferase-like YPA_RS00110 IPR001465 Malate synthase YPA_RS00110 IPR006252 Malate synthase A YPA_RS00110 IPR011076 Malate synthase-like YPA_RS00115 IPR006254 Isocitrate lyase YPA_RS00115 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain YPA_RS00115 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site YPA_RS00120 IPR010452 Isocitrate dehydrogenase kinasephosphatase YPA_RS00125 IPR014757 Transcription regulator IclR, C-terminal YPA_RS00125 IPR029016 GAF domain-like YPA_RS00130 IPR005471 Transcription regulator IclR, N-terminal YPA_RS00130 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS00135 IPR000489 Pterin-binding YPA_RS00135 IPR003726 Homocysteine S-methyltransferase YPA_RS00135 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain YPA_RS00135 IPR004223 Vitamin B12-dependent methionine synthase, activation domain YPA_RS00135 IPR006158 Cobalamin (vitamin B12)-binding domain YPA_RS00135 IPR011005 Dihydropteroate synthase-like YPA_RS00135 IPR011822 Cobalamin-dependent methionine synthase YPA_RS00140 IPR008638 Filamentous haemagglutinin, N-terminal YPA_RS00140 IPR011050 Pectin lyase fold/virulence factor YPA_RS00140 IPR012334 Pectin lyase fold YPA_RS00140 IPR025157 Haemagluttinin repeat YPA_RS00145 IPR005565 Haemolysin activator HlyB YPA_RS00145 IPR013686 Polypeptide-transport-associated, ShlB-type YPA_RS00145 IPR027282 Two partner secretion pathway transporter YPA_RS00150 IPR001048 Aspartate/glutamate/uridylate kinase YPA_RS00150 IPR001341 Aspartate kinase domain YPA_RS00150 IPR005260 Aspartate kinase, monofunctional class YPA_RS00150 IPR018042 Aspartate kinase, conserved site YPA_RS00155 IPR001672 Phosphoglucose isomerase (PGI) YPA_RS00155 IPR018189 Phosphoglucose isomerase, conserved site YPA_RS00155 IPR023096 Phosphoglucose isomerase, C-terminal YPA_RS00160 IPR009315 Phosphate-starvation-induced PsiE YPA_RS00160 IPR020948 Phosphate-starvation-induced PsiE-like YPA_RS00165 IPR000515 MetI-like domain YPA_RS00170 IPR000515 MetI-like domain YPA_RS00170 IPR029345 Maltose transport system permease protein MalF, P2 domain YPA_RS00175 IPR006060 Maltose binding protein YPA_RS00175 IPR006061 Bacterial extracellular solute-binding family 1, conserved site YPA_RS00185 IPR003439 ABC transporter-like YPA_RS00185 IPR003593 AAA+ ATPase domain YPA_RS00185 IPR008995 Molybdate/tungstate binding, C-terminal YPA_RS00185 IPR012340 Nucleic acid-binding, OB-fold YPA_RS00185 IPR013611 Transport-associated OB, type 2 YPA_RS00185 IPR017871 ABC transporter, conserved site YPA_RS00185 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS00190 IPR003192 Porin, LamB type YPA_RS00190 IPR023738 Maltoporin YPA_RS00195 IPR010794 Maltose operon periplasmic YPA_RS00205 IPR008514 Type VI secretion system effector, Hcp YPA_RS00210 IPR008312 Uncharacterised conserved protein UCP028301 YPA_RS00215 IPR010269 Protein of unknown function DUF877 YPA_RS00220 IPR007048 GpW/Gp25/anti-adapter protein IraD YPA_RS00220 IPR017737 Type VI secretion system, lysozyme-related protein YPA_RS00225 IPR010272 Type VI secretion system, VCA0110 YPA_RS00230 IPR001584 Integrase, catalytic core YPA_RS00230 IPR012337 Ribonuclease H-like domain YPA_RS00230 IPR025948 HTH-like domain YPA_RS00235 IPR009057 Homeodomain-like YPA_RS00235 IPR010921 Trp repressor/replication initiator YPA_RS00235 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS00240 IPR000589 Ribosomal protein S15 YPA_RS00240 IPR005290 Ribosomal protein S15, bacterial-type YPA_RS00240 IPR009068 S15/NS1, RNA-binding YPA_RS00245 IPR002501 Pseudouridine synthase II YPA_RS00245 IPR014780 tRNA pseudouridine synthase II, TruB YPA_RS00245 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal YPA_RS00245 IPR015947 PUA-like domain YPA_RS00245 IPR020103 Pseudouridine synthase, catalytic domain YPA_RS00245 IPR032819 YPA_RS00245 YPA_RS00250 IPR000238 Ribosome-binding factor A YPA_RS00250 IPR015946 K homology domain-like, alpha/beta YPA_RS00250 IPR020053 Ribosome-binding factor A, conserved site YPA_RS00250 IPR023799 Ribosome-binding factor A domain YPA_RS00255 IPR000178 Translation initiation factor aIF-2, bacterial-like YPA_RS00255 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 YPA_RS00255 IPR005225 Small GTP-binding protein domain YPA_RS00255 IPR006847 Translation initiation factor IF-2, N-terminal YPA_RS00255 IPR009000 Translation protein, beta-barrel domain YPA_RS00255 IPR009061 DNA binding domain, putative YPA_RS00255 IPR013575 Initiation factor 2 associated domain, bacterial YPA_RS00255 IPR023115 Translation initiation factor IF- 2, domain 3 YPA_RS00255 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS00260 IPR004087 K Homology domain YPA_RS00260 IPR009019 K homology domain, prokaryotic type YPA_RS00260 IPR010213 Transcription termination factor NusA YPA_RS00260 IPR010214 Transcription termination factor NusA, C-terminal duplication YPA_RS00260 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical YPA_RS00260 IPR012340 Nucleic acid-binding, OB-fold YPA_RS00260 IPR013735 Transcription factor NusA, N-terminal YPA_RS00260 IPR015946 K homology domain-like, alpha/beta YPA_RS00260 IPR022967 RNA-binding domain, S1 YPA_RS00260 IPR025249 KH domain, NusA-like YPA_RS00260 IPR030842 YPA_RS00260 YPA_RS00265 IPR003728 Ribosome maturation factor RimP YPA_RS00265 IPR028989 Ribosome maturation factor RimP, N-terminal YPA_RS00265 IPR028998 Ribosome maturation factor RimP, C-terminal YPA_RS00280 IPR004692 Preprotein translocase SecG subunit YPA_RS00285 IPR005841 Alpha-D-phosphohexomutase superfamily YPA_RS00285 IPR005843 Alpha-D-phosphohexomutase, C-terminal YPA_RS00285 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I YPA_RS00285 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II YPA_RS00285 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III YPA_RS00285 IPR006352 Phosphoglucosamine mutase YPA_RS00285 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III YPA_RS00285 IPR016066 Alpha-D-phosphohexomutase, conserved site YPA_RS00290 IPR000489 Pterin-binding YPA_RS00290 IPR006390 Dihydropteroate synthase YPA_RS00290 IPR011005 Dihydropteroate synthase-like YPA_RS00295 IPR000642 Peptidase M41 YPA_RS00295 IPR003593 AAA+ ATPase domain YPA_RS00295 IPR003959 ATPase, AAA-type, core YPA_RS00295 IPR003960 ATPase, AAA-type, conserved site YPA_RS00295 IPR005936 Peptidase, FtsH YPA_RS00295 IPR011546 Peptidase M41, FtsH extracellular YPA_RS00295 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS00300 IPR002877 Ribosomal RNA methyltransferase FtsJ domain YPA_RS00300 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria YPA_RS00300 IPR015507 Ribosomal RNA large subunit methyltransferase E YPA_RS00300 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPA_RS00305 IPR001890 RNA-binding, CRM domain YPA_RS00305 IPR017924 RNA-binding protein YhbY YPA_RS00310 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal YPA_RS00310 IPR006359 Transcription elongation factor GreA YPA_RS00310 IPR018151 Transcription elongation factor, GreA/GreB, conserved site YPA_RS00310 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal YPA_RS00310 IPR023459 Transcription elongation factor GreA/GreB family YPA_RS00310 IPR028624 Transcription elongation factor GreA/GreB YPA_RS00315 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C YPA_RS00315 IPR012338 Beta-lactamase/transpeptidase-like YPA_RS00320 IPR001789 Signal transduction response regulator, receiver domain YPA_RS00320 IPR001867 Signal transduction response regulator, C-terminal YPA_RS00320 IPR011006 CheY-like superfamily YPA_RS00320 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS00325 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPA_RS00325 IPR003660 HAMP linker domain YPA_RS00325 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPA_RS00325 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPA_RS00330 IPR006073 GTP binding domain YPA_RS00330 IPR006074 GTP1/OBG, conserved site YPA_RS00330 IPR006169 GTP1/OBG domain YPA_RS00330 IPR014100 GTP-binding protein Obg/CgtA YPA_RS00330 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS00335 IPR000620 Drug/metabolite transporter YPA_RS00340 IPR001684 Ribosomal protein L27 YPA_RS00340 IPR018261 Ribosomal protein L27, conserved site YPA_RS00345 IPR001787 Ribosomal protein L21 YPA_RS00345 IPR018258 Ribosomal protein L21, conserved site YPA_RS00345 IPR028909 Ribosomal protein L21-like YPA_RS00350 IPR000092 Polyprenyl synthetase YPA_RS00350 IPR008949 Terpenoid synthase YPA_RS00350 IPR017446 Polyprenyl synthetase-related YPA_RS00355 IPR003314 Transposase MuA/Repressor CI, DNA-binding YPA_RS00355 IPR009061 DNA binding domain, putative YPA_RS00355 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS00360 IPR010982 Lambda repressor-like, DNA-binding domain YPA_RS00365 IPR001236 Lactate/malate dehydrogenase, N-terminal YPA_RS00365 IPR001252 Malate dehydrogenase, active site YPA_RS00365 IPR001557 L-lactate/malate dehydrogenase YPA_RS00365 IPR010097 Malate dehydrogenase, type 1 YPA_RS00365 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal YPA_RS00365 IPR016040 NAD(P)-binding domain YPA_RS00365 IPR022383 Lactate/malate dehydrogenase, C-terminal YPA_RS00365 IPR023958 Malate dehydrogenase, type 1, bacterial YPA_RS00370 IPR001669 Arginine repressor YPA_RS00370 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS00370 IPR020899 Arginine repressor, C-terminal YPA_RS00370 IPR020900 Arginine repressor, DNA-binding domain YPA_RS00370 IPR024946 Arginine repressor C-terminal-like domain YPA_RS00375 IPR010854 Domain of unknown function DUF1471 YPA_RS00375 IPR025543 Dodecin-like YPA_RS00385 IPR000713 Mur ligase, N-terminal YPA_RS00385 IPR004101 Mur ligase, C-terminal YPA_RS00385 IPR005757 Murein peptide ligase YPA_RS00385 IPR013221 Mur ligase, central YPA_RS00385 IPR016040 NAD(P)-binding domain YPA_RS00390 IPR000146 Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase YPA_RS00390 IPR020548 Fructose-1,6-bisphosphatase, active site YPA_RS00390 IPR028343 Fructose-1,6-bisphosphatase YPA_RS00390 IPR033391 YPA_RS00390 YPA_RS00395 IPR008162 Inorganic pyrophosphatase YPA_RS00400 IPR009288 AIG2-like YPA_RS00400 IPR013024 Butirosin biosynthesis, BtrG-like YPA_RS00405 IPR007452 Protein of unknown function DUF490 YPA_RS00405 IPR011049 Serralysin-like metalloprotease, C-terminal YPA_RS00410 IPR000184 Bacterial surface antigen (D15) YPA_RS00410 IPR010827 Surface antigen variable number YPA_RS00415 IPR002569 Peptide methionine sulphoxide reductase MsrA YPA_RS00415 IPR028427 Peptide methionine sulfoxide reductase YPA_RS00420 IPR000644 CBS domain YPA_RS00420 IPR002550 Domain of unknown function DUF21 YPA_RS00420 IPR005170 Transporter-associated domain YPA_RS00420 IPR016166 FAD-binding, type 2 YPA_RS00420 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 YPA_RS00425 IPR009491 Protein of unknown function DUF1107 YPA_RS00430 IPR006513 Conserved hypothetical protein CHP01626, YtfJ YPA_RS00430 IPR012336 Thioredoxin-like fold YPA_RS00435 IPR000760 Inositol monophosphatase YPA_RS00435 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial YPA_RS00435 IPR020550 Inositol monophosphatase, conserved site YPA_RS00435 IPR020583 Inositol monophosphatase, metal-binding site YPA_RS00440 IPR004843 Calcineurin-like phosphoesterase domain, apaH type YPA_RS00440 IPR006146 5'-Nucleotidase, conserved site YPA_RS00440 IPR006179 5'-Nucleotidase/apyrase YPA_RS00440 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase YPA_RS00440 IPR008334 5'-Nucleotidase, C-terminal YPA_RS00440 IPR029052 Metallo-dependent phosphatase-like YPA_RS00445 IPR012312 Haemerythrin/HHE cation-binding motif YPA_RS00445 IPR019903 Repair of iron centres family YPA_RS00445 IPR023742 Iron-sulfur cluster repair protein YftE YPA_RS00450 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal YPA_RS00450 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain YPA_RS00450 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type YPA_RS00455 IPR007340 Opacity-associated protein A YPA_RS00455 IPR013731 Opacity-associated protein A, N-terminal YPA_RS00460 IPR022231 Protein of unknown function DUF3757 YPA_RS00465 IPR002686 Transposase IS200-like YPA_RS00475 IPR000244 Ribosomal protein L9 YPA_RS00475 IPR009027 Ribosomal protein L9/RNase H1, N-terminal YPA_RS00475 IPR020069 Ribosomal protein L9, C-terminal YPA_RS00475 IPR020070 Ribosomal protein L9, N-terminal YPA_RS00475 IPR020594 Ribosomal protein L9, bacteria/chloroplast YPA_RS00480 IPR001648 Ribosomal protein S18 YPA_RS00480 IPR018275 Ribosomal protein S18, conserved site YPA_RS00485 IPR000424 Primosome PriB/single-strand DNA-binding YPA_RS00485 IPR012340 Nucleic acid-binding, OB-fold YPA_RS00485 IPR023646 Primosomal replication protein PriB YPA_RS00490 IPR000529 Ribosomal protein S6 YPA_RS00490 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 YPA_RS00490 IPR020814 Ribosomal protein S6, plastid/chloroplast YPA_RS00490 IPR020815 Ribosomal protein S6, conserved site YPA_RS00500 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain YPA_RS00500 IPR029058 Alpha/Beta hydrolase fold YPA_RS00505 IPR001584 Integrase, catalytic core YPA_RS00505 IPR006120 Resolvase, HTH domain YPA_RS00505 IPR009057 Homeodomain-like YPA_RS00505 IPR012337 Ribonuclease H-like domain YPA_RS00510 IPR001270 ClpA/B family YPA_RS00510 IPR002611 IstB-like ATP-binding protein YPA_RS00510 IPR003593 AAA+ ATPase domain YPA_RS00510 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS00510 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS00515 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain YPA_RS00515 IPR018129 Phosphoenolpyruvate carboxylase, active site YPA_RS00515 IPR021135 Phosphoenolpyruvate carboxylase YPA_RS00515 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type YPA_RS00515 IPR033129 YPA_RS00515 YPA_RS00520 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site YPA_RS00520 IPR002933 Peptidase M20 YPA_RS00520 IPR010169 Acetylornithine deacetylase (ArgE) YPA_RS00520 IPR011650 Peptidase M20, dimerisation domain YPA_RS00525 IPR000534 Semialdehyde dehydrogenase, NAD-binding YPA_RS00525 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 YPA_RS00525 IPR012280 Semialdehyde dehydrogenase, dimerisation domain YPA_RS00525 IPR016040 NAD(P)-binding domain YPA_RS00525 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site YPA_RS00530 IPR001048 Aspartate/glutamate/uridylate kinase YPA_RS00530 IPR004662 Acetylglutamate kinase YPA_RS00535 IPR000362 Fumarate lyase family YPA_RS00535 IPR008948 L-Aspartase-like YPA_RS00535 IPR009049 Argininosuccinate lyase YPA_RS00535 IPR020557 Fumarate lyase, conserved site YPA_RS00535 IPR022761 Fumarate lyase, N-terminal YPA_RS00535 IPR024083 Fumarase/histidase, N-terminal YPA_RS00535 IPR029419 Argininosuccinate lyase, C-terminal YPA_RS00545 IPR000531 TonB-dependent receptor, beta-barrel YPA_RS00545 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor YPA_RS00545 IPR011276 TonB-dependent haem/haemoglobin receptor YPA_RS00545 IPR012910 TonB-dependent receptor, plug YPA_RS00550 IPR010495 Haem-binding HasA YPA_RS00555 IPR003439 ABC transporter-like YPA_RS00555 IPR003593 AAA+ ATPase domain YPA_RS00555 IPR010128 ATPase, type I secretion system, PrtD YPA_RS00555 IPR011527 ABC transporter type 1, transmembrane domain YPA_RS00555 IPR017871 ABC transporter, conserved site YPA_RS00555 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS00560 IPR003997 RTX secretion protein D, Gram-negative bacteria YPA_RS00560 IPR006144 Secretion protein HlyD, conserved site YPA_RS00560 IPR010129 Type I secretion membrane fusion protein, HlyD YPA_RS00565 IPR006260 TonB, C-terminal YPA_RS00570 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YPA_RS00570 IPR016156 FAD/NAD-linked reductase, dimerisation domain YPA_RS00570 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPA_RS00575 IPR002109 Glutaredoxin YPA_RS00575 IPR011767 Glutaredoxin active site YPA_RS00575 IPR011906 Glutaredoxin domain YPA_RS00575 IPR012336 Thioredoxin-like fold YPA_RS00575 IPR013740 Redoxin YPA_RS00575 IPR014025 Glutaredoxin subgroup YPA_RS00580 IPR000847 Transcription regulator HTH, LysR YPA_RS00580 IPR005119 LysR, substrate-binding YPA_RS00580 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS00585 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YPA_RS00585 IPR016156 FAD/NAD-linked reductase, dimerisation domain YPA_RS00585 IPR022962 Soluble pyridine nucleotide transhydrogenase YPA_RS00585 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPA_RS00590 IPR001647 DNA-binding HTH domain, TetR-type YPA_RS00590 IPR009057 Homeodomain-like YPA_RS00590 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal YPA_RS00590 IPR023764 Transcriptional repressor HTH, FabR YPA_RS00595 IPR009867 Protein of unknown function DUF1422 YPA_RS00600 IPR010280 (Uracil-5)-methyltransferase family YPA_RS00600 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA YPA_RS00600 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPA_RS00600 IPR030390 YPA_RS00600 YPA_RS00600 IPR030391 YPA_RS00600 YPA_RS00610 IPR000531 TonB-dependent receptor, beta-barrel YPA_RS00610 IPR010101 TonB-dependent vitamin B12 transporter BtuB YPA_RS00610 IPR010917 TonB-dependent receptor, conserved site YPA_RS00610 IPR012910 TonB-dependent receptor, plug YPA_RS00615 IPR001920 Asp/Glu racemase YPA_RS00615 IPR004391 Glutamate racemase YPA_RS00615 IPR015942 Asp/Glu/hydantoin racemase YPA_RS00615 IPR018187 Asp/Glu racemase, active site YPA_RS00615 IPR033134 YPA_RS00615 YPA_RS00655 IPR025997 Periplasmic binding protein domain YPA_RS00655 IPR028082 Periplasmic binding protein-like I YPA_RS00660 IPR003439 ABC transporter-like YPA_RS00660 IPR003593 AAA+ ATPase domain YPA_RS00660 IPR017871 ABC transporter, conserved site YPA_RS00660 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS00665 IPR001851 ABC transporter, permease YPA_RS00670 IPR001851 ABC transporter, permease YPA_RS00675 IPR000847 Transcription regulator HTH, LysR YPA_RS00675 IPR005119 LysR, substrate-binding YPA_RS00675 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS00675 IPR020890 Transcription regulator HTH, HdfR YPA_RS00680 IPR007335 Protein of unknown function DUF413 YPA_RS00685 IPR000523 Magnesium chelatase, ChlI subunit YPA_RS00685 IPR001208 Mini-chromosome maintenance, DNA-dependent ATPase YPA_RS00685 IPR003593 AAA+ ATPase domain YPA_RS00685 IPR004482 Mg chelatase-related protein YPA_RS00685 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPA_RS00685 IPR020568 Ribosomal protein S5 domain 2-type fold YPA_RS00685 IPR025158 Mg chelatase-related protein, C-terminal domain YPA_RS00685 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS00690 IPR000399 TPP-binding enzyme, conserved site YPA_RS00690 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YPA_RS00690 IPR012000 Thiamine pyrophosphate enzyme, central domain YPA_RS00690 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain YPA_RS00690 IPR012846 Acetolactate synthase, large subunit, biosynthetic YPA_RS00690 IPR029035 DHS-like NAD/FAD-binding domain YPA_RS00690 IPR029061 Thiamin diphosphate-binding fold YPA_RS00700 IPR001544 Aminotransferase, class IV YPA_RS00700 IPR005785 Branched-chain amino acid aminotransferase I YPA_RS00700 IPR018300 Aminotransferase, class IV, conserved site YPA_RS00705 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase YPA_RS00705 IPR004404 Dihydroxy-acid dehydratase YPA_RS00705 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YPA_RS00705 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site YPA_RS00710 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site YPA_RS00710 IPR001721 ACT-like domain YPA_RS00710 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPA_RS00710 IPR005787 Threonine dehydratase, biosynthetic YPA_RS00715 IPR010351 Protein of unknown function DUF943 YPA_RS00720 IPR010351 Protein of unknown function DUF943 YPA_RS00725 IPR017483 Conserved hypothetical protein CHP03034 YPA_RS00730 IPR017483 Conserved hypothetical protein CHP03034 YPA_RS00740 IPR000847 Transcription regulator HTH, LysR YPA_RS00740 IPR005119 LysR, substrate-binding YPA_RS00740 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS00745 IPR000506 Acetohydroxy acid isomeroreductase C-terminal YPA_RS00745 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YPA_RS00745 IPR013023 Acetohydroxy acid isomeroreductase YPA_RS00745 IPR013116 Acetohydroxy acid isomeroreductase, catalytic YPA_RS00745 IPR013328 Dehydrogenase, multihelical YPA_RS00745 IPR016040 NAD(P)-binding domain YPA_RS00755 IPR016128 Pyosin/cloacin translocation domain YPA_RS00765 IPR003060 Pyocin S killer protein YPA_RS00765 IPR003615 HNH nuclease YPA_RS00765 IPR024622 Colicin/pyocin, DNase domain YPA_RS00770 IPR000290 Colicin immunity protein/pyocin immunity protein YPA_RS00770 IPR023802 Colicin/pyocin immunity protein domain YPA_RS00780 IPR001829 Pili assembly chaperone, bacterial YPA_RS00780 IPR008962 PapD-like YPA_RS00780 IPR016147 PapD, N-terminal, bacterial YPA_RS00780 IPR016148 Pili assembly chaperone, C-terminal domain YPA_RS00780 IPR018046 Pili assembly chaperone, conserved site YPA_RS00785 IPR000259 Fimbrial-type adhesion domain YPA_RS00785 IPR008966 Adhesion domain YPA_RS00785 IPR011228 Uncharacterised conserved protein UCP029766 YPA_RS00790 IPR000015 Outer membrane usher protein YPA_RS00790 IPR018030 Fimbrial membrane usher, conserved site YPA_RS00790 IPR025885 PapC, N-terminal domain YPA_RS00790 IPR025949 PapC-like, C-terminal domain YPA_RS00795 IPR001829 Pili assembly chaperone, bacterial YPA_RS00795 IPR008962 PapD-like YPA_RS00795 IPR016147 PapD, N-terminal, bacterial YPA_RS00795 IPR016148 Pili assembly chaperone, C-terminal domain YPA_RS00800 IPR000259 Fimbrial-type adhesion domain YPA_RS00800 IPR008966 Adhesion domain YPA_RS00810 IPR001207 Transposase, mutator type YPA_RS00815 IPR007788 Glutamine cyclotransferase YPA_RS00815 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like YPA_RS00815 IPR015943 WD40/YVTN repeat-like-containing domain YPA_RS00830 IPR000212 DNA helicase, UvrD/REP type YPA_RS00830 IPR005752 DNA helicase, ATP-dependent, RepA type YPA_RS00830 IPR013986 DExx box DNA helicase domain YPA_RS00830 IPR014016 UvrD-like Helicase, ATP-binding domain YPA_RS00830 IPR014017 DNA helicase, UvrD-like, C-terminal YPA_RS00830 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS00835 IPR003695 Ppx/GppA phosphatase YPA_RS00840 IPR003695 Ppx/GppA phosphatase YPA_RS00845 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site YPA_RS00845 IPR001650 Helicase, C-terminal YPA_RS00845 IPR011545 DEAD/DEAH box helicase domain YPA_RS00845 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YPA_RS00845 IPR023554 RNA helicase, ATP-dependent, RhlB-type YPA_RS00845 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS00850 IPR005746 Thioredoxin YPA_RS00850 IPR012336 Thioredoxin-like fold YPA_RS00850 IPR013766 Thioredoxin domain YPA_RS00850 IPR017937 Thioredoxin, conserved site YPA_RS00855 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain YPA_RS00855 IPR003593 AAA+ ATPase domain YPA_RS00855 IPR004665 Transcription termination factor Rho YPA_RS00855 IPR011112 Rho termination factor, N-terminal YPA_RS00855 IPR011113 Rho termination factor, RNA-binding YPA_RS00855 IPR011129 Cold shock protein YPA_RS00855 IPR012340 Nucleic acid-binding, OB-fold YPA_RS00855 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS00860 IPR000715 Glycosyl transferase, family 4 YPA_RS00860 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase YPA_RS00865 IPR003856 Lipopolysaccharide biosynthesis YPA_RS00865 IPR032895 YPA_RS00865 YPA_RS00870 IPR003331 UDP-N-acetylglucosamine 2-epimerase YPA_RS00870 IPR029767 UDP-N-acetylglucosamine 2-epimerase, WecB-type YPA_RS00870 IPR032892 YPA_RS00870 YPA_RS00875 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal YPA_RS00875 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YPA_RS00875 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation YPA_RS00875 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal YPA_RS00875 IPR016040 NAD(P)-binding domain YPA_RS00875 IPR017476 UDP-glucose/GDP-mannose dehydrogenase YPA_RS00875 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase YPA_RS00875 IPR032891 YPA_RS00875 YPA_RS00880 IPR005888 dTDP-glucose 4,6-dehydratase YPA_RS00880 IPR016040 NAD(P)-binding domain YPA_RS00885 IPR005835 Nucleotidyl transferase YPA_RS00885 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form YPA_RS00885 IPR029044 Nucleotide-diphospho-sugar transferases YPA_RS00890 IPR000182 GNAT domain YPA_RS00890 IPR012752 TDP-D-fucosamine acetyltransferase WecD YPA_RS00890 IPR016181 Acyl-CoA N-acyltransferase YPA_RS00895 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase YPA_RS00895 IPR012749 TDP-4-keto-6-deoxy-D-glucose transaminase YPA_RS00895 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPA_RS00895 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPA_RS00895 IPR015424 Pyridoxal phosphate-dependent transferase YPA_RS00895 IPR032894 YPA_RS00895 YPA_RS00900 IPR002797 Polysaccharide biosynthesis protein YPA_RS00900 IPR032896 YPA_RS00900 YPA_RS00905 IPR009993 4-alpha-L-fucosyltransferase YPA_RS00910 IPR010691 Uncharacterised protein family WzyE YPA_RS00915 IPR004629 Glycosyl transferase WecB/TagA/CpsF YPA_RS00915 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase YPA_RS00920 IPR002293 Amino acid/polyamine transporter I YPA_RS00920 IPR004840 Amino acid permease, conserved site YPA_RS00920 IPR004841 Amino acid permease/ SLC12A domain YPA_RS00945 IPR001584 Integrase, catalytic core YPA_RS00945 IPR006120 Resolvase, HTH domain YPA_RS00945 IPR009057 Homeodomain-like YPA_RS00945 IPR012337 Ribonuclease H-like domain YPA_RS00950 IPR001270 ClpA/B family YPA_RS00950 IPR002611 IstB-like ATP-binding protein YPA_RS00950 IPR003593 AAA+ ATPase domain YPA_RS00950 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS00950 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS00955 IPR002686 Transposase IS200-like YPA_RS00960 IPR005254 Heme biosynthesis-associated TPR protein YPA_RS00960 IPR010817 HemY, N-terminal YPA_RS00960 IPR011990 Tetratricopeptide-like helical domain YPA_RS00965 IPR007470 HemX YPA_RS00970 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase YPA_RS00975 IPR000860 Tetrapyrrole biosynthesis, hydroxymethylbilane synthase YPA_RS00975 IPR022417 Porphobilinogen deaminase, N-terminal YPA_RS00975 IPR022418 Porphobilinogen deaminase, C-terminal YPA_RS00975 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site YPA_RS00985 IPR000274 Adenylate cyclase, class-I YPA_RS00985 IPR024685 Adenylate cyclase class-I, N-terminal domain YPA_RS00985 IPR024686 Adenylate cyclase class-I, conserved site YPA_RS00990 IPR002908 Frataxin/CyaY YPA_RS00990 IPR020895 Frataxin conserved site YPA_RS00995 IPR032831 YPA_RS00995 YPA_RS01000 IPR001653 Diaminopimelate epimerase, DapF YPA_RS01000 IPR018510 Diaminopimelate epimerase, active site YPA_RS01005 IPR007435 Protein of unknown function DUF484 YPA_RS01010 IPR002104 Integrase, catalytic YPA_RS01010 IPR004107 Integrase, SAM-like, N-terminal YPA_RS01010 IPR010998 Integrase, Lambda-type, N-terminal YPA_RS01010 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPA_RS01010 IPR011931 Tyrosine recombinase XerC YPA_RS01010 IPR013762 Integrase-like, catalytic core YPA_RS01010 IPR023009 Tyrosine recombinase XerC/XerD YPA_RS01010 IPR023109 Integrase/recombinase, N-terminal YPA_RS01015 IPR006439 HAD hydrolase, subfamily IA YPA_RS01015 IPR023214 HAD-like domain YPA_RS01020 IPR000212 DNA helicase, UvrD/REP type YPA_RS01020 IPR005753 DNA helicase, ATP-dependent, UvrD type YPA_RS01020 IPR013986 DExx box DNA helicase domain YPA_RS01020 IPR014016 UvrD-like Helicase, ATP-binding domain YPA_RS01020 IPR014017 DNA helicase, UvrD-like, C-terminal YPA_RS01020 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS01025 IPR001647 DNA-binding HTH domain, TetR-type YPA_RS01025 IPR009057 Homeodomain-like YPA_RS01025 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal YPA_RS01030 IPR008322 Uncharacterised protein family UPF0261 YPA_RS01035 IPR009215 TIM-barrel domain, IGPS-like YPA_RS01035 IPR013785 Aldolase-type TIM barrel YPA_RS01035 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain YPA_RS01040 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB YPA_RS01040 IPR004488 Magnesium/cobalt transport protein CorA YPA_RS01045 IPR000620 Drug/metabolite transporter YPA_RS01045 IPR004626 RarD protein YPA_RS01050 IPR003736 Phenylacetic acid degradation-related domain YPA_RS01050 IPR006683 Thioesterase superfamily YPA_RS01050 IPR029069 HotDog domain YPA_RS01055 IPR003187 Phospholipase A1 YPA_RS01060 IPR001650 Helicase, C-terminal YPA_RS01060 IPR002121 HRDC domain YPA_RS01060 IPR004589 DNA helicase, ATP-dependent, RecQ type YPA_RS01060 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial YPA_RS01060 IPR010997 HRDC-like YPA_RS01060 IPR011545 DEAD/DEAH box helicase domain YPA_RS01060 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS01060 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YPA_RS01060 IPR018982 RQC domain YPA_RS01060 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS01060 IPR032284 YPA_RS01060 YPA_RS01065 IPR001123 Lysine-type exporter protein (LYSE/YGGA) YPA_RS01065 IPR004778 Homoserine/Threonine efflux protein YPA_RS01070 IPR001123 Lysine-type exporter protein (LYSE/YGGA) YPA_RS01075 IPR022742 Putative lysophospholipase YPA_RS01075 IPR029058 Alpha/Beta hydrolase fold YPA_RS01080 IPR000150 Cof protein YPA_RS01080 IPR006379 HAD-superfamily hydrolase, subfamily IIB YPA_RS01080 IPR023214 HAD-like domain YPA_RS01085 IPR004954 Peptidase M60, viral enhancin protein YPA_RS01090 IPR004129 Glycerophosphoryl diester phosphodiesterase YPA_RS01090 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain YPA_RS01090 IPR030395 YPA_RS01090 YPA_RS01100 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase YPA_RS01100 IPR006076 FAD dependent oxidoreductase YPA_RS01100 IPR007419 BFD-like [2Fe-2S]-binding domain YPA_RS01100 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit YPA_RS01100 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPA_RS01100 IPR031656 YPA_RS01100 YPA_RS01105 IPR003953 FAD binding domain YPA_RS01105 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit YPA_RS01105 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPA_RS01110 IPR004017 Cysteine-rich domain YPA_RS01110 IPR009051 Alpha-helical ferredoxin YPA_RS01110 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit YPA_RS01110 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPA_RS01110 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPA_RS01115 IPR014894 Protein DcrB YPA_RS01120 IPR003744 Protein of unknown function DUF165 YPA_RS01125 IPR001455 TusA-like domain YPA_RS01125 IPR022931 Sulphurtransferase TusA YPA_RS01130 IPR001757 Cation-transporting P-type ATPase YPA_RS01130 IPR006121 Heavy metal-associated domain, HMA YPA_RS01130 IPR008250 P-type ATPase, A domain YPA_RS01130 IPR017969 Heavy-metal-associated, conserved site YPA_RS01130 IPR018303 P-type ATPase, phosphorylation site YPA_RS01130 IPR023214 HAD-like domain YPA_RS01130 IPR023299 P-type ATPase, cytoplasmic domain N YPA_RS01130 IPR027256 Cation-transporting P-type ATPase, subfamily IB YPA_RS01140 IPR014949 Protein of unknown function DUF1820 YPA_RS01145 IPR019635 Protein of unknown function DUF2500 YPA_RS01150 IPR009525 Protein of unknown function DUF1145 YPA_RS01155 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPA_RS01155 IPR004398 RNA methyltransferase, RsmD YPA_RS01155 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPA_RS01165 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain YPA_RS01165 IPR003593 AAA+ ATPase domain YPA_RS01165 IPR004390 Signal-recognition particle receptor FtsY YPA_RS01165 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle YPA_RS01165 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS01170 IPR003439 ABC transporter-like YPA_RS01170 IPR003593 AAA+ ATPase domain YPA_RS01170 IPR005286 Cell division protein FtsE, ATP-binding YPA_RS01170 IPR017871 ABC transporter, conserved site YPA_RS01170 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS01175 IPR003838 Permease FtsX-like YPA_RS01175 IPR004513 ABC transporter, cell division protein FtsX YPA_RS01180 IPR000943 RNA polymerase sigma-70 YPA_RS01180 IPR007627 RNA polymerase sigma-70 region 2 YPA_RS01180 IPR007630 RNA polymerase sigma-70 region 4 YPA_RS01180 IPR009042 RNA polymerase sigma-70 region 1.2 YPA_RS01180 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS01180 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria YPA_RS01180 IPR013324 RNA polymerase sigma factor, region 3/4 YPA_RS01180 IPR013325 RNA polymerase sigma factor, region 2 YPA_RS01180 IPR014284 RNA polymerase sigma-70 like domain YPA_RS01180 IPR016263 RNA polymerase sporulation-specific sigma factor, SigK/SigE YPA_RS01190 IPR002686 Transposase IS200-like YPA_RS01195 IPR000182 GNAT domain YPA_RS01195 IPR016181 Acyl-CoA N-acyltransferase YPA_RS01195 IPR032900 YPA_RS01195 YPA_RS01200 IPR000709 Leu/Ile/Val-binding protein YPA_RS01200 IPR028081 Leucine-binding protein domain YPA_RS01200 IPR028082 Periplasmic binding protein-like I YPA_RS01205 IPR001270 ClpA/B family YPA_RS01205 IPR002611 IstB-like ATP-binding protein YPA_RS01205 IPR003593 AAA+ ATPase domain YPA_RS01205 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS01205 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS01210 IPR001584 Integrase, catalytic core YPA_RS01210 IPR006120 Resolvase, HTH domain YPA_RS01210 IPR009057 Homeodomain-like YPA_RS01210 IPR012337 Ribonuclease H-like domain YPA_RS01215 IPR001851 ABC transporter, permease YPA_RS01220 IPR001851 ABC transporter, permease YPA_RS01220 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal YPA_RS01225 IPR003439 ABC transporter-like YPA_RS01225 IPR003593 AAA+ ATPase domain YPA_RS01225 IPR017871 ABC transporter, conserved site YPA_RS01225 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS01225 IPR032823 YPA_RS01225 YPA_RS01230 IPR003439 ABC transporter-like YPA_RS01230 IPR003593 AAA+ ATPase domain YPA_RS01230 IPR017871 ABC transporter, conserved site YPA_RS01230 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS01230 IPR030660 YPA_RS01230 YPA_RS01245 IPR007540 Fimbrial major subunit, CS1-type YPA_RS01255 IPR008962 PapD-like YPA_RS01260 IPR032636 YPA_RS01260 YPA_RS01265 IPR007540 Fimbrial major subunit, CS1-type YPA_RS01270 IPR006061 Bacterial extracellular solute-binding family 1, conserved site YPA_RS01275 IPR000515 MetI-like domain YPA_RS01280 IPR000515 MetI-like domain YPA_RS01280 IPR030165 YPA_RS01280 YPA_RS01285 IPR003439 ABC transporter-like YPA_RS01285 IPR003593 AAA+ ATPase domain YPA_RS01285 IPR008995 Molybdate/tungstate binding, C-terminal YPA_RS01285 IPR012340 Nucleic acid-binding, OB-fold YPA_RS01285 IPR013611 Transport-associated OB, type 2 YPA_RS01285 IPR017871 ABC transporter, conserved site YPA_RS01285 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS01290 IPR004129 Glycerophosphoryl diester phosphodiesterase YPA_RS01290 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain YPA_RS01290 IPR030395 YPA_RS01290 YPA_RS01295 IPR004776 Auxin efflux carrier YPA_RS01300 IPR000620 Drug/metabolite transporter YPA_RS01300 IPR004779 Carboxylate/Amino Acid/Amine Transporter YPA_RS01305 IPR000847 Transcription regulator HTH, LysR YPA_RS01305 IPR005119 LysR, substrate-binding YPA_RS01305 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS01310 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal YPA_RS01310 IPR006276 Cobalamin-independent methionine synthase YPA_RS01310 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal YPA_RS01315 IPR002925 Dienelactone hydrolase YPA_RS01315 IPR029058 Alpha/Beta hydrolase fold YPA_RS01320 IPR000845 Nucleoside phosphorylase domain YPA_RS01320 IPR010058 Uridine phosphorylase YPA_RS01320 IPR018016 Nucleoside phosphorylase, conserved site YPA_RS01320 IPR018017 Nucleoside phosphorylase YPA_RS01325 IPR026893 Tyrosine/serine-protein phosphatase IphP-type YPA_RS01325 IPR029021 Protein-tyrosine phosphatase-like YPA_RS01330 IPR003706 Carbon starvation protein CstA YPA_RS01330 IPR025299 CstA C-terminal domain YPA_RS01335 IPR032816 YPA_RS01335 YPA_RS01335 IPR032818 YPA_RS01335 YPA_RS01340 IPR003798 DNA recombination RmuC YPA_RS01345 IPR004033 UbiE/COQ5 methyltransferase YPA_RS01345 IPR023576 UbiE/COQ5 methyltransferase, conserved site YPA_RS01345 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPA_RS01350 IPR003033 SCP2 sterol-binding domain YPA_RS01355 IPR004147 UbiB domain YPA_RS01355 IPR010232 Probable protein kinase UbiB YPA_RS01355 IPR011009 Protein kinase-like domain YPA_RS01360 IPR003369 Sec-independent protein translocase protein TatA/B/E YPA_RS01360 IPR006312 Sec-independent protein translocase protein TatA/E YPA_RS01365 IPR003998 Twin-arginine translocation protein TatB-like YPA_RS01365 IPR018448 Twin-arginine translocation protein TatB YPA_RS01370 IPR002033 Sec-independent periplasmic protein translocase TatC YPA_RS01370 IPR019820 Sec-independent periplasmic protein translocase, conserved site YPA_RS01375 IPR001130 TatD family YPA_RS01375 IPR018228 Deoxyribonuclease, TatD-related, conserved site YPA_RS01375 IPR032466 YPA_RS01375 YPA_RS01380 IPR001584 Integrase, catalytic core YPA_RS01380 IPR006120 Resolvase, HTH domain YPA_RS01380 IPR009057 Homeodomain-like YPA_RS01380 IPR012337 Ribonuclease H-like domain YPA_RS01385 IPR001270 ClpA/B family YPA_RS01385 IPR002611 IstB-like ATP-binding protein YPA_RS01385 IPR003593 AAA+ ATPase domain YPA_RS01385 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS01385 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS01390 IPR025326 Protein of unknown function DUF4232 YPA_RS01395 IPR005493 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase YPA_RS01395 IPR010203 Regulator of ribonuclease activity A YPA_RS01395 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria YPA_RS01400 IPR000537 UbiA prenyltransferase family YPA_RS01400 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase YPA_RS01400 IPR026046 UbiA prenyltransferase domain containing protein 1 YPA_RS01405 IPR003593 AAA+ ATPase domain YPA_RS01405 IPR003959 ATPase, AAA-type, core YPA_RS01405 IPR004491 Heat shock protein HslU YPA_RS01405 IPR019489 Clp ATPase, C-terminal YPA_RS01405 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS01410 IPR001353 Proteasome, subunit alpha/beta YPA_RS01410 IPR022281 ATP-dependent protease, HslV subunit YPA_RS01410 IPR029055 Nucleophile aminohydrolases, N-terminal YPA_RS01415 IPR007730 Sporulation-related domain YPA_RS01415 IPR011930 Cell division protein FtsN YPA_RS01420 IPR000843 Transcription regulator HTH, LacI YPA_RS01420 IPR010982 Lambda repressor-like, DNA-binding domain YPA_RS01420 IPR028082 Periplasmic binding protein-like I YPA_RS01430 IPR001650 Helicase, C-terminal YPA_RS01430 IPR005259 Primosomal protein n YPA_RS01430 IPR011545 DEAD/DEAH box helicase domain YPA_RS01430 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YPA_RS01430 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS01435 IPR002150 Ribosomal protein L31 YPA_RS01435 IPR027491 Ribosomal protein L31 type A YPA_RS01440 IPR008024 YiaAB two helix YPA_RS01450 IPR002084 Methionine repressor MetJ YPA_RS01450 IPR010985 Ribbon-helix-helix YPA_RS01450 IPR023453 Methionine repressor MetJ domain YPA_RS01460 IPR001048 Aspartate/glutamate/uridylate kinase YPA_RS01460 IPR001341 Aspartate kinase domain YPA_RS01460 IPR001342 Homoserine dehydrogenase, catalytic YPA_RS01460 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding YPA_RS01460 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I YPA_RS01460 IPR016040 NAD(P)-binding domain YPA_RS01460 IPR018042 Aspartate kinase, conserved site YPA_RS01460 IPR019811 Homoserine dehydrogenase, conserved site YPA_RS01465 IPR003171 Methylenetetrahydrofolate reductase YPA_RS01465 IPR004620 5,10-methylenetetrahydrofolate reductase YPA_RS01465 IPR029041 FAD-linked oxidoreductase-like YPA_RS01470 IPR001584 Integrase, catalytic core YPA_RS01470 IPR012337 Ribonuclease H-like domain YPA_RS01470 IPR025948 HTH-like domain YPA_RS01475 IPR009057 Homeodomain-like YPA_RS01475 IPR010921 Trp repressor/replication initiator YPA_RS01475 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS01480 IPR001927 Sodium:galactoside symporter YPA_RS01480 IPR020846 Major facilitator superfamily domain YPA_RS01485 IPR000531 TonB-dependent receptor, beta-barrel YPA_RS01485 IPR010105 TonB-dependent siderophore receptor YPA_RS01485 IPR010917 TonB-dependent receptor, conserved site YPA_RS01485 IPR012910 TonB-dependent receptor, plug YPA_RS01490 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPA_RS01490 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase YPA_RS01495 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal YPA_RS01495 IPR022770 Ferric iron reductase FhuF domain YPA_RS01500 IPR016181 Acyl-CoA N-acyltransferase YPA_RS01500 IPR019432 Siderophore biosynthesis protein, conserved domain YPA_RS01505 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal YPA_RS01505 IPR022770 Ferric iron reductase FhuF domain YPA_RS01510 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal YPA_RS01515 IPR011701 Major facilitator superfamily YPA_RS01515 IPR020846 Major facilitator superfamily domain YPA_RS01520 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal YPA_RS01520 IPR015889 Intradiol ring-cleavage dioxygenase, core YPA_RS01525 IPR010126 Esterase, PHB depolymerase YPA_RS01525 IPR029058 Alpha/Beta hydrolase fold YPA_RS01530 IPR000792 Transcription regulator LuxR, C-terminal YPA_RS01530 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain YPA_RS01530 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS01530 IPR016032 Signal transduction response regulator, C-terminal effector YPA_RS01535 IPR001690 Autoinducer synthesis protein YPA_RS01535 IPR016181 Acyl-CoA N-acyltransferase YPA_RS01535 IPR018311 Autoinducer synthesis, conserved site YPA_RS01540 IPR003675 CAAX amino terminal protease YPA_RS01550 IPR003220 InsA N-terminal domain YPA_RS01550 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain YPA_RS01565 IPR008312 Uncharacterised conserved protein UCP028301 YPA_RS01570 IPR010269 Protein of unknown function DUF877 YPA_RS01575 IPR010263 Protein of unknown function DUF876 YPA_RS01580 IPR017732 Type IV / VI secretion system, DotU YPA_RS01585 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal YPA_RS01590 IPR008514 Type VI secretion system effector, Hcp YPA_RS01595 IPR001270 ClpA/B family YPA_RS01595 IPR003593 AAA+ ATPase domain YPA_RS01595 IPR003959 ATPase, AAA-type, core YPA_RS01595 IPR004176 Clp, N-terminal YPA_RS01595 IPR017729 Type VI secretion system, ATPase ClpV1 YPA_RS01595 IPR018368 ClpA/B, conserved site 1 YPA_RS01595 IPR019489 Clp ATPase, C-terminal YPA_RS01595 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS01600 IPR006531 Gp5 N-terminal YPA_RS01600 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPA_RS01600 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPA_RS01600 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal YPA_RS01600 IPR027440 Capsid protein alpha-like domain YPA_RS01600 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain YPA_RS01605 IPR023346 Lysozyme-like domain YPA_RS01620 IPR003220 InsA N-terminal domain YPA_RS01620 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain YPA_RS01625 IPR005063 Transposase, IS1 YPA_RS01630 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal YPA_RS01635 IPR011055 Duplicated hybrid motif YPA_RS01635 IPR016047 Peptidase M23 YPA_RS01635 IPR023346 Lysozyme-like domain YPA_RS01645 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain YPA_RS01650 IPR005063 Transposase, IS1 YPA_RS01655 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal YPA_RS01660 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPA_RS01660 IPR013762 Integrase-like, catalytic core YPA_RS01670 IPR000310 Orn/Lys/Arg decarboxylase, major domain YPA_RS01670 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal YPA_RS01670 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal YPA_RS01670 IPR011006 CheY-like superfamily YPA_RS01670 IPR011193 Ornithine/lysine/arginine decarboxylase YPA_RS01670 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPA_RS01670 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPA_RS01670 IPR015424 Pyridoxal phosphate-dependent transferase YPA_RS01670 IPR027464 Ornithine decarboxylase, N-terminal domain YPA_RS01670 IPR027568 Ornithine decarboxylase SpeF YPA_RS01675 IPR025997 Periplasmic binding protein domain YPA_RS01675 IPR028082 Periplasmic binding protein-like I YPA_RS01680 IPR003439 ABC transporter-like YPA_RS01680 IPR003593 AAA+ ATPase domain YPA_RS01680 IPR017871 ABC transporter, conserved site YPA_RS01680 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS01685 IPR001851 ABC transporter, permease YPA_RS01690 IPR000531 TonB-dependent receptor, beta-barrel YPA_RS01690 IPR010105 TonB-dependent siderophore receptor YPA_RS01690 IPR012910 TonB-dependent receptor, plug YPA_RS01695 IPR002491 ABC transporter periplasmic binding domain YPA_RS01700 IPR000189 Prokaryotic transglycosylase, active site YPA_RS01700 IPR008258 Lytic transglycosylase-like SLT domain YPA_RS01700 IPR023346 Lysozyme-like domain YPA_RS01700 IPR023664 Murein transglycosylase-C YPA_RS01700 IPR024570 Murein transglycosylase-C, N-terminal YPA_RS01705 IPR007457 Fe(II) trafficking protein YggX YPA_RS01710 IPR000445 Helix-hairpin-helix motif YPA_RS01710 IPR003265 HhH-GPD domain YPA_RS01710 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif YPA_RS01710 IPR004035 Endonuclease III, iron-sulphur binding site YPA_RS01710 IPR004036 Endonuclease III-like, conserved site-2 YPA_RS01710 IPR005760 A/G-specific adenine glycosylase MutY YPA_RS01710 IPR011257 DNA glycosylase YPA_RS01710 IPR015797 NUDIX hydrolase domain-like YPA_RS01710 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal YPA_RS01710 IPR029119 MutY, C-terminal YPA_RS01715 IPR003358 tRNA (guanine-N-7) methyltransferase YPA_RS01715 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPA_RS01720 IPR007416 Protein of unknown function DUF469 YPA_RS01725 IPR012338 Beta-lactamase/transpeptidase-like YPA_RS01725 IPR015868 Glutaminase YPA_RS01730 IPR021307 Protein of unknown function DUF2884 YPA_RS01735 IPR021307 Protein of unknown function DUF2884 YPA_RS01740 IPR011049 Serralysin-like metalloprotease, C-terminal YPA_RS01740 IPR020974 Peptidase C80, RTX cysteine protease domain YPA_RS01745 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related YPA_RS01745 IPR006638 Elongator protein 3/MiaB/NifB YPA_RS01745 IPR007197 Radical SAM YPA_RS01745 IPR010723 HemN, C-terminal domain YPA_RS01745 IPR023404 Radical SAM, alpha/beta horseshoe YPA_RS01750 IPR002637 Ham1-like protein YPA_RS01750 IPR020922 Non-canonical purine NTP pyrophosphatase YPA_RS01750 IPR029001 Inosine triphosphate pyrophosphatase-like YPA_RS01755 IPR003746 Protein of unknown function DUF167 YPA_RS01755 IPR005228 Conserved hypothetical protein CHP00251 YPA_RS01760 IPR003425 Uncharacterised protein family Ycf19 YPA_RS01765 IPR000304 Pyrroline-5-carboxylate reductase YPA_RS01765 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YPA_RS01765 IPR016040 NAD(P)-binding domain YPA_RS01765 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal YPA_RS01765 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain YPA_RS01770 IPR001608 Alanine racemase, N-terminal YPA_RS01770 IPR011078 Uncharacterised protein family UPF0001 YPA_RS01770 IPR029066 PLP-binding barrel YPA_RS01775 IPR001482 Type II secretion system protein E YPA_RS01775 IPR003593 AAA+ ATPase domain YPA_RS01775 IPR006321 Pilus retraction protein PilT YPA_RS01775 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS01780 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type YPA_RS01780 IPR017754 Agmatine deiminase YPA_RS01785 IPR003010 Carbon-nitrogen hydrolase YPA_RS01785 IPR017755 N-carbamoylputrescine amidase YPA_RS01790 IPR005227 Resolvase, holliday junction-type, YqgF-like YPA_RS01790 IPR006641 YqgF/RNase H-like domain YPA_RS01790 IPR012337 Ribonuclease H-like domain YPA_RS01795 IPR003774 Protein of unknown function UPF0301 YPA_RS01800 IPR004215 Prokaryotic glutathione synthetase, N-terminal YPA_RS01800 IPR004218 Prokaryotic glutathione synthetase, ATP-binding YPA_RS01800 IPR006284 Glutathione synthetase, prokaryotic YPA_RS01800 IPR013815 ATP-grasp fold, subdomain 1 YPA_RS01800 IPR013816 ATP-grasp fold, subdomain 2 YPA_RS01800 IPR016185 Pre-ATP-grasp domain YPA_RS01805 IPR006700 Ribosomal RNA small subunit methyltransferase E YPA_RS01805 IPR015947 PUA-like domain YPA_RS01805 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPA_RS01805 IPR029028 Alpha/beta knot methyltransferases YPA_RS01810 IPR007346 Endonuclease I YPA_RS01815 IPR006640 Domain of unknown function SprT-like YPA_RS01815 IPR023483 Uncharacterised protein family SprT YPA_RS01820 IPR002133 S-adenosylmethionine synthetase YPA_RS01820 IPR022628 S-adenosylmethionine synthetase, N-terminal YPA_RS01820 IPR022629 S-adenosylmethionine synthetase, central domain YPA_RS01820 IPR022630 S-adenosylmethionine synthetase, C-terminal YPA_RS01820 IPR022631 S-adenosylmethionine synthetase, conserved site YPA_RS01820 IPR022636 S-adenosylmethionine synthetase superfamily YPA_RS01825 IPR000183 Ornithine/DAP/Arg decarboxylase YPA_RS01825 IPR002985 Arginine decarboxylase YPA_RS01825 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal YPA_RS01825 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal YPA_RS01825 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal YPA_RS01825 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site YPA_RS01825 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site YPA_RS01825 IPR029066 PLP-binding barrel YPA_RS01830 IPR002686 Transposase IS200-like YPA_RS01835 IPR017941 Rieske [2Fe-2S] iron-sulphur domain YPA_RS01840 IPR001915 Peptidase M48 YPA_RS01845 IPR005474 Transketolase, N-terminal YPA_RS01845 IPR005475 Transketolase-like, pyrimidine-binding domain YPA_RS01845 IPR005478 Transketolase, bacterial-like YPA_RS01845 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II YPA_RS01845 IPR020826 Transketolase binding site YPA_RS01845 IPR029061 Thiamin diphosphate-binding fold YPA_RS01845 IPR033247 YPA_RS01845 YPA_RS01845 IPR033248 YPA_RS01845 YPA_RS01855 IPR002686 Transposase IS200-like YPA_RS01860 IPR006422 D-erythrose-4-phosphate dehydrogenase YPA_RS01860 IPR016040 NAD(P)-binding domain YPA_RS01860 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain YPA_RS01860 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain YPA_RS01860 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site YPA_RS01860 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family YPA_RS01865 IPR001576 Phosphoglycerate kinase YPA_RS01865 IPR015824 Phosphoglycerate kinase, N-terminal YPA_RS01865 IPR015901 Phosphoglycerate kinase, C-terminal YPA_RS01865 IPR015911 Phosphoglycerate kinase, conserved site YPA_RS01870 IPR000771 Ketose-bisphosphate aldolase, class-II YPA_RS01870 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype YPA_RS01870 IPR013785 Aldolase-type TIM barrel YPA_RS01880 IPR006685 Mechanosensitive ion channel MscS YPA_RS01880 IPR006686 Mechanosensitive ion channel MscS, conserved site YPA_RS01880 IPR008910 Conserved TM helix YPA_RS01880 IPR010920 Like-Sm (LSM) domain YPA_RS01880 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 YPA_RS01880 IPR011066 Mechanosensitive ion channel MscS, C-terminal YPA_RS01885 IPR001123 Lysine-type exporter protein (LYSE/YGGA) YPA_RS01890 IPR001270 ClpA/B family YPA_RS01890 IPR002611 IstB-like ATP-binding protein YPA_RS01890 IPR003593 AAA+ ATPase domain YPA_RS01890 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS01890 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS01895 IPR001584 Integrase, catalytic core YPA_RS01895 IPR006120 Resolvase, HTH domain YPA_RS01895 IPR009057 Homeodomain-like YPA_RS01895 IPR012337 Ribonuclease H-like domain YPA_RS01900 IPR001123 Lysine-type exporter protein (LYSE/YGGA) YPA_RS01905 IPR007497 Protein of unknown function DUF541 YPA_RS01910 IPR000847 Transcription regulator HTH, LysR YPA_RS01910 IPR005119 LysR, substrate-binding YPA_RS01910 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS01910 IPR017685 Transcription regulator ArgP YPA_RS01910 IPR023490 Chromosome initiation inhibitor YPA_RS01915 IPR004788 Ribose 5-phosphate isomerase, type A YPA_RS01915 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup YPA_RS01920 IPR002912 ACT domain YPA_RS01920 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPA_RS01920 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain YPA_RS01920 IPR016040 NAD(P)-binding domain YPA_RS01920 IPR029015 D-3-phosphoglycerate dehydrogenase, type2 YPA_RS01920 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YPA_RS01920 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YPA_RS01925 IPR002698 5-formyltetrahydrofolate cyclo-ligase YPA_RS01925 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain YPA_RS01930 IPR007838 Cell division protein ZapA-like YPA_RS01930 IPR023771 Cell division protein ZapA, eubacteria YPA_RS01935 IPR011978 Uncharacterised protein family UPF0149 YPA_RS01940 IPR000994 Peptidase M24, structural domain YPA_RS01940 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site YPA_RS01940 IPR001714 Peptidase M24, methionine aminopeptidase YPA_RS01940 IPR007865 Aminopeptidase P, N-terminal YPA_RS01940 IPR028980 Creatinase/Aminopeptidase P, N-terminal YPA_RS01940 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal YPA_RS01945 IPR002938 Monooxygenase, FAD-binding YPA_RS01945 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 YPA_RS01945 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase YPA_RS01945 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site YPA_RS01945 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPA_RS01950 IPR002938 Monooxygenase, FAD-binding YPA_RS01950 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 YPA_RS01950 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site YPA_RS01950 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPA_RS01955 IPR006222 Glycine cleavage T-protein, N-terminal YPA_RS01955 IPR006223 Glycine cleavage system T protein YPA_RS01955 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain YPA_RS01955 IPR022903 Glycine cleavage system T protein, bacteria YPA_RS01955 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 YPA_RS01955 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA YPA_RS01955 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain YPA_RS01960 IPR002930 Glycine cleavage system H-protein YPA_RS01960 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site YPA_RS01960 IPR011053 Single hybrid motif YPA_RS01960 IPR017453 Glycine cleavage system H-protein, subgroup YPA_RS01965 IPR003437 Glycine cleavage system P protein, homodimeric YPA_RS01965 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPA_RS01965 IPR015424 Pyridoxal phosphate-dependent transferase YPA_RS01965 IPR020580 Glycine cleavage system P-protein, N-terminal YPA_RS01965 IPR020581 Glycine cleavage system P protein YPA_RS01970 IPR024311 Lipocalin-like domain YPA_RS01980 IPR005594 YadA-like, C-terminal YPA_RS01980 IPR008635 Coiled stalk of trimeric autotransporter adhesin YPA_RS01980 IPR008640 Head domain of trimeric autotransporter adhesin YPA_RS01980 IPR011049 Serralysin-like metalloprotease, C-terminal YPA_RS01990 IPR004254 Hly-III-related YPA_RS01990 IPR005744 HylII YPA_RS01995 IPR018681 Protein of unknown function DUF2165, transmembrane YPA_RS02000 IPR006222 Glycine cleavage T-protein, N-terminal YPA_RS02000 IPR017703 YgfZ/GcvT conserved site YPA_RS02000 IPR023758 tRNA-modifying protein YgfZ YPA_RS02000 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain YPA_RS02005 IPR005631 Flavinator of succinate dehydrogenase YPA_RS02010 IPR009883 Protein of unknown function DUF1434 YPA_RS02015 IPR001789 Signal transduction response regulator, receiver domain YPA_RS02015 IPR001867 Signal transduction response regulator, C-terminal YPA_RS02015 IPR011006 CheY-like superfamily YPA_RS02015 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS02015 IPR016032 Signal transduction response regulator, C-terminal effector YPA_RS02020 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPA_RS02020 IPR003660 HAMP linker domain YPA_RS02020 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPA_RS02020 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPA_RS02020 IPR029150 Sensory domain of two-component sensor kinase YPA_RS02020 IPR029151 Periplasmic sensor domain-like YPA_RS02025 IPR010364 Uncharacterised protein family, inner membrane CreD YPA_RS02030 IPR001226 Flavodoxin, conserved site YPA_RS02030 IPR008254 Flavodoxin/nitric oxide synthase YPA_RS02030 IPR010086 Flavodoxin, long chain YPA_RS02030 IPR029039 Flavoprotein-like YPA_RS02035 IPR002104 Integrase, catalytic YPA_RS02035 IPR004107 Integrase, SAM-like, N-terminal YPA_RS02035 IPR010998 Integrase, Lambda-type, N-terminal YPA_RS02035 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPA_RS02035 IPR011932 Tyrosine recombinase XerD YPA_RS02035 IPR013762 Integrase-like, catalytic core YPA_RS02035 IPR023009 Tyrosine recombinase XerC/XerD YPA_RS02035 IPR023109 Integrase/recombinase, N-terminal YPA_RS02040 IPR009094 Disulphide bond isomerase, DsbC, N-terminal YPA_RS02040 IPR012336 Thioredoxin-like fold YPA_RS02040 IPR017937 Thioredoxin, conserved site YPA_RS02040 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal YPA_RS02045 IPR001667 DDH domain YPA_RS02045 IPR003156 DHHA1 domain YPA_RS02045 IPR004610 Bacterial RecJ exonuclease YPA_RS02050 IPR000352 Peptide chain release factor class I/class II YPA_RS02050 IPR004374 Peptide chain release factor 2 YPA_RS02050 IPR005139 Peptide chain release factor YPA_RS02050 IPR014720 Double-stranded RNA-binding domain YPA_RS02055 IPR002313 Lysine-tRNA ligase, class II YPA_RS02055 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) YPA_RS02055 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type YPA_RS02055 IPR012340 Nucleic acid-binding, OB-fold YPA_RS02055 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal YPA_RS02055 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like YPA_RS02065 IPR025166 Domain of unknown function DUF4102 YPA_RS02070 IPR001270 ClpA/B family YPA_RS02070 IPR002611 IstB-like ATP-binding protein YPA_RS02070 IPR003593 AAA+ ATPase domain YPA_RS02070 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS02070 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS02075 IPR001584 Integrase, catalytic core YPA_RS02075 IPR006120 Resolvase, HTH domain YPA_RS02075 IPR009057 Homeodomain-like YPA_RS02075 IPR012337 Ribonuclease H-like domain YPA_RS02080 IPR002104 Integrase, catalytic YPA_RS02080 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPA_RS02080 IPR013762 Integrase-like, catalytic core YPA_RS02080 IPR023109 Integrase/recombinase, N-terminal YPA_RS02095 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family YPA_RS02100 IPR001387 Cro/C1-type helix-turn-helix domain YPA_RS02100 IPR010982 Lambda repressor-like, DNA-binding domain YPA_RS02105 IPR031451 YPA_RS02105 YPA_RS02110 IPR001387 Cro/C1-type helix-turn-helix domain YPA_RS02110 IPR010982 Lambda repressor-like, DNA-binding domain YPA_RS02110 IPR022452 Zinc finger/helix-turn-helix protein, YgiT YPA_RS02110 IPR022453 Zinc finger, YgiT-type YPA_RS02110 IPR032758 YPA_RS02110 YPA_RS02115 IPR002694 Zinc finger, CHC2-type YPA_RS02115 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal YPA_RS02115 IPR006171 Toprim domain YPA_RS02115 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS02115 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal YPA_RS02115 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal YPA_RS02115 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS02120 IPR009241 Addiction module killer protein YPA_RS02130 IPR009061 DNA binding domain, putative YPA_RS02130 IPR010260 Bacteriophage P4, Orf88 YPA_RS02150 IPR003812 Fido domain YPA_RS02155 IPR008727 PAAR motif YPA_RS02155 IPR016128 Pyosin/cloacin translocation domain YPA_RS02160 IPR025983 Cysteine-rich CPCC domain YPA_RS02170 IPR015287 Colicin D immunity protein domain YPA_RS02180 IPR021488 Protein of unknown function DUF3142 YPA_RS02195 IPR008727 PAAR motif YPA_RS02200 IPR024476 Protein of unknown function DUF3861 YPA_RS02205 IPR005149 Transcription regulator PadR N-terminal YPA_RS02205 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS02210 IPR024453 YPA_RS02210 YPA_RS02220 IPR025997 Periplasmic binding protein domain YPA_RS02220 IPR028082 Periplasmic binding protein-like I YPA_RS02225 IPR001851 ABC transporter, permease YPA_RS02230 IPR003439 ABC transporter-like YPA_RS02230 IPR003593 AAA+ ATPase domain YPA_RS02230 IPR017871 ABC transporter, conserved site YPA_RS02230 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS02235 IPR003439 ABC transporter-like YPA_RS02235 IPR003593 AAA+ ATPase domain YPA_RS02235 IPR008995 Molybdate/tungstate binding, C-terminal YPA_RS02235 IPR012340 Nucleic acid-binding, OB-fold YPA_RS02235 IPR013611 Transport-associated OB, type 2 YPA_RS02235 IPR017871 ABC transporter, conserved site YPA_RS02235 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS02240 IPR006060 Maltose binding protein YPA_RS02245 IPR000515 MetI-like domain YPA_RS02250 IPR000515 MetI-like domain YPA_RS02255 IPR011683 Glycosyl hydrolase family 53 YPA_RS02255 IPR013781 Glycoside hydrolase, catalytic domain YPA_RS02255 IPR017853 Glycoside hydrolase, superfamily YPA_RS02260 IPR003476 Glycoside hydrolase, family 42 YPA_RS02260 IPR013529 Glycoside hydrolase, family 42, N-terminal YPA_RS02260 IPR013738 Beta-galactosidase trimerisation YPA_RS02260 IPR013739 Beta-galactosidase C-terminal YPA_RS02260 IPR013781 Glycoside hydrolase, catalytic domain YPA_RS02260 IPR017853 Glycoside hydrolase, superfamily YPA_RS02260 IPR029062 Class I glutamine amidotransferase-like YPA_RS02265 IPR001996 Phosphotransferase system, IIB component, type 1 YPA_RS02265 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site YPA_RS02270 IPR003192 Porin, LamB type YPA_RS02270 IPR023738 Maltoporin YPA_RS02275 IPR000843 Transcription regulator HTH, LacI YPA_RS02275 IPR010982 Lambda repressor-like, DNA-binding domain YPA_RS02275 IPR028082 Periplasmic binding protein-like I YPA_RS02280 IPR000322 Glycoside hydrolase, family 31 YPA_RS02280 IPR011013 Galactose mutarotase-like domain YPA_RS02280 IPR017853 Glycoside hydrolase, superfamily YPA_RS02280 IPR025887 Glycoside hydrolase family 31, N-terminal domain YPA_RS02280 IPR033403 YPA_RS02280 YPA_RS02285 IPR011701 Major facilitator superfamily YPA_RS02285 IPR020846 Major facilitator superfamily domain YPA_RS02290 IPR000843 Transcription regulator HTH, LacI YPA_RS02290 IPR010982 Lambda repressor-like, DNA-binding domain YPA_RS02290 IPR028082 Periplasmic binding protein-like I YPA_RS02300 IPR002818 ThiJ/PfpI YPA_RS02300 IPR029062 Class I glutamine amidotransferase-like YPA_RS02305 IPR000771 Ketose-bisphosphate aldolase, class-II YPA_RS02305 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY YPA_RS02305 IPR013785 Aldolase-type TIM barrel YPA_RS02310 IPR016624 Uncharacterised conserved protein UCP014753 YPA_RS02315 IPR000917 Sulfatase YPA_RS02315 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha YPA_RS02315 IPR017850 Alkaline-phosphatase-like, core domain YPA_RS02315 IPR024607 Sulfatase, conserved site YPA_RS02320 IPR007197 Radical SAM YPA_RS02320 IPR013785 Aldolase-type TIM barrel YPA_RS02320 IPR023867 Anaerobic sulphatase maturase, radical SAM YPA_RS02320 IPR023885 4Fe4S-binding SPASM domain YPA_RS02325 IPR008928 Six-hairpin glycosidase-like YPA_RS02325 IPR010905 Glycosyl hydrolase, family 88 YPA_RS02325 IPR012341 Six-hairpin glycosidase YPA_RS02330 IPR002347 Glucose/ribitol dehydrogenase YPA_RS02330 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase YPA_RS02330 IPR016040 NAD(P)-binding domain YPA_RS02330 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPA_RS02335 IPR003764 N-acetylglucosamine-6-phosphate deacetylase YPA_RS02335 IPR006680 Amidohydrolase 1 YPA_RS02335 IPR011059 Metal-dependent hydrolase, composite domain YPA_RS02335 IPR032466 YPA_RS02335 YPA_RS02340 IPR004701 Phosphotransferase system, mannose-type IIA component YPA_RS02345 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component YPA_RS02350 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit YPA_RS02355 IPR004720 Phosphotransferase system, sorbose subfamily IIB component YPA_RS02355 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup YPA_RS02360 IPR001347 Sugar isomerase (SIS) YPA_RS02360 IPR014180 Sugar isomerase, AgaS YPA_RS02365 IPR012062 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit GatZ/KbaZ YPA_RS02365 IPR013785 Aldolase-type TIM barrel YPA_RS02370 IPR001034 HTH DeoR N-terminal domain YPA_RS02370 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS02370 IPR014036 DeoR C-terminal sensor domain YPA_RS02375 IPR000917 Sulfatase YPA_RS02375 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha YPA_RS02375 IPR017850 Alkaline-phosphatase-like, core domain YPA_RS02380 IPR002686 Transposase IS200-like YPA_RS02385 IPR001584 Integrase, catalytic core YPA_RS02385 IPR006120 Resolvase, HTH domain YPA_RS02385 IPR009057 Homeodomain-like YPA_RS02385 IPR012337 Ribonuclease H-like domain YPA_RS02390 IPR001270 ClpA/B family YPA_RS02390 IPR002611 IstB-like ATP-binding protein YPA_RS02390 IPR003593 AAA+ ATPase domain YPA_RS02390 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS02390 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS02395 IPR003159 Polysaccharide lyase family 8, central domain YPA_RS02395 IPR004103 Polysaccharide lyase family 8, C-terminal YPA_RS02395 IPR008929 Chondroitin AC/alginate lyase YPA_RS02395 IPR008979 Galactose-binding domain-like YPA_RS02395 IPR011013 Galactose mutarotase-like domain YPA_RS02395 IPR011071 Polysaccharide lyase family 8-like, C-terminal YPA_RS02395 IPR012329 Polysaccharide lyase family 8, N-terminal YPA_RS02395 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup YPA_RS02395 IPR015176 Lyase, N-terminal YPA_RS02395 IPR015177 Lyase, catalytic YPA_RS02395 IPR024200 Chondroitin sulfate ABC endolyase YPA_RS02400 IPR005546 Autotransporter beta-domain YPA_RS02400 IPR006315 Outer membrane autotransporter barrel YPA_RS02405 IPR031605 YPA_RS02405 YPA_RS02420 IPR001765 Carbonic anhydrase YPA_RS02420 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal YPA_RS02425 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS02425 IPR016032 Signal transduction response regulator, C-terminal effector YPA_RS02430 IPR024961 YPA_RS02430 YPA_RS02435 IPR001775 GspD/PilQ family YPA_RS02435 IPR004845 Type II secretion system GspD, conserved site YPA_RS02435 IPR004846 Type II/III secretion system YPA_RS02435 IPR005644 NolW-like YPA_RS02435 IPR013356 Type II secretion system GspD YPA_RS02440 IPR001482 Type II secretion system protein E YPA_RS02440 IPR003593 AAA+ ATPase domain YPA_RS02440 IPR013369 Type II secretion system GspE YPA_RS02440 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS02450 IPR001992 Type II secretion system conserved site YPA_RS02450 IPR003004 GspF/PilC family YPA_RS02450 IPR018076 Type II secretion system F domain YPA_RS02455 IPR000983 Bacterial general secretion pathway protein G-type pilin YPA_RS02455 IPR010054 General secretion pathway protein G YPA_RS02455 IPR012902 Prokaryotic N-terminal methylation site YPA_RS02455 IPR013545 Type II secretion system protein G YPA_RS02460 IPR002416 Type II secretion system protein H YPA_RS02460 IPR012902 Prokaryotic N-terminal methylation site YPA_RS02460 IPR022346 General secretion pathway, GspH YPA_RS02465 IPR003413 Type II secretion system protein I domain YPA_RS02470 IPR010055 Type II secretion system protein J YPA_RS02470 IPR012902 Prokaryotic N-terminal methylation site YPA_RS02475 IPR005628 General secretion pathway protein K YPA_RS02480 IPR007812 Type II secretion system protein L YPA_RS02480 IPR024230 GspL, cytoplasmic actin-ATPase-like domain YPA_RS02480 IPR025691 GspL periplasmic domain YPA_RS02490 IPR000045 Prepilin type IV endopeptidase, peptidase domain YPA_RS02490 IPR010627 Peptidase A24A, N-terminal YPA_RS02490 IPR014032 Peptidase A24A, prepilin type IV, bacterial YPA_RS02495 IPR019114 Chaperone lipoprotein, PulS/OutS-like YPA_RS02500 IPR001867 Signal transduction response regulator, C-terminal YPA_RS02500 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS02500 IPR016032 Signal transduction response regulator, C-terminal effector YPA_RS02510 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding YPA_RS02510 IPR003660 HAMP linker domain YPA_RS02510 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YPA_RS02510 IPR004090 Chemotaxis methyl-accepting receptor YPA_RS02515 IPR001853 DSBA-like thioredoxin domain YPA_RS02515 IPR012336 Thioredoxin-like fold YPA_RS02515 IPR023169 UPF0413, central domain YPA_RS02520 IPR001279 Beta-lactamase-like YPA_RS02525 IPR000847 Transcription regulator HTH, LysR YPA_RS02525 IPR005119 LysR, substrate-binding YPA_RS02525 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS02530 IPR011701 Major facilitator superfamily YPA_RS02530 IPR020846 Major facilitator superfamily domain YPA_RS02535 IPR000847 Transcription regulator HTH, LysR YPA_RS02535 IPR005119 LysR, substrate-binding YPA_RS02535 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS02540 IPR000183 Ornithine/DAP/Arg decarboxylase YPA_RS02540 IPR002986 Diaminopimelate decarboxylase, LysA YPA_RS02540 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal YPA_RS02540 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal YPA_RS02540 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal YPA_RS02540 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site YPA_RS02540 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site YPA_RS02540 IPR029066 PLP-binding barrel YPA_RS02545 IPR000843 Transcription regulator HTH, LacI YPA_RS02545 IPR010982 Lambda repressor-like, DNA-binding domain YPA_RS02545 IPR028082 Periplasmic binding protein-like I YPA_RS02550 IPR006656 Molybdopterin oxidoreductase YPA_RS02550 IPR006657 Molydopterin dinucleotide-binding domain YPA_RS02550 IPR009010 Aspartate decarboxylase-like domain YPA_RS02555 IPR000873 AMP-dependent synthetase/ligase YPA_RS02555 IPR002123 Phospholipid/glycerol acyltransferase YPA_RS02555 IPR020845 AMP-binding, conserved site YPA_RS02555 IPR023775 Bifunctional 2-acylglycerophosphoethanolamine acyltransferase/acyl synthetase Aas YPA_RS02560 IPR011701 Major facilitator superfamily YPA_RS02560 IPR020846 Major facilitator superfamily domain YPA_RS02560 IPR023727 Lysophospholipid transporter LplT YPA_RS02575 IPR001395 Aldo/keto reductase YPA_RS02575 IPR023210 NADP-dependent oxidoreductase domain YPA_RS02580 IPR004230 DNA mismatch repair protein MutH YPA_RS02580 IPR011335 Restriction endonuclease type II-like YPA_RS02580 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II YPA_RS02595 IPR000086 NUDIX hydrolase domain YPA_RS02595 IPR015797 NUDIX hydrolase domain-like YPA_RS02595 IPR020084 NUDIX hydrolase, conserved site YPA_RS02595 IPR020476 NUDIX hydrolase YPA_RS02595 IPR022927 RNA pyrophosphohydrolase RppH YPA_RS02600 IPR000121 PEP-utilising enzyme, C-terminal YPA_RS02600 IPR003018 GAF domain YPA_RS02600 IPR006318 Phosphoenolpyruvate-utilising enzyme YPA_RS02600 IPR008279 PEP-utilising enzyme, mobile domain YPA_RS02600 IPR008731 Phosphotransferase system, enzyme I N-terminal YPA_RS02600 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain YPA_RS02600 IPR018274 PEP-utilising enzyme, active site YPA_RS02600 IPR023151 PEP-utilising enzyme, conserved site YPA_RS02600 IPR029016 GAF domain-like YPA_RS02605 IPR001640 Prolipoprotein diacylglyceryl transferase YPA_RS02610 IPR000398 Thymidylate synthase YPA_RS02610 IPR020940 Thymidylate synthase, active site YPA_RS02610 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain YPA_RS02620 IPR012902 Prokaryotic N-terminal methylation site YPA_RS02625 IPR012902 Prokaryotic N-terminal methylation site YPA_RS02625 IPR016419 Prepilin peptidase-dependent protein B, predicted YPA_RS02630 IPR019652 Protein of unknown function DUF2509 YPA_RS02635 IPR012902 Prokaryotic N-terminal methylation site YPA_RS02635 IPR022204 Prepilin peptidase dependent protein C YPA_RS02640 IPR006697 Exodeoxyribonuclease V, gamma subunit YPA_RS02640 IPR011335 Restriction endonuclease type II-like YPA_RS02640 IPR013986 DExx box DNA helicase domain YPA_RS02640 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS02645 IPR001431 Peptidase M16, zinc-binding site YPA_RS02645 IPR007863 Peptidase M16, C-terminal domain YPA_RS02645 IPR011237 Peptidase M16 domain YPA_RS02645 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like YPA_RS02645 IPR011765 Peptidase M16, N-terminal YPA_RS02645 IPR032632 YPA_RS02645 YPA_RS02650 IPR000212 DNA helicase, UvrD/REP type YPA_RS02650 IPR004586 Exodeoxyribonuclease V, beta subunit YPA_RS02650 IPR011335 Restriction endonuclease type II-like YPA_RS02650 IPR011604 Exonuclease, phage-type/RecB, C-terminal YPA_RS02650 IPR014016 UvrD-like Helicase, ATP-binding domain YPA_RS02650 IPR014017 DNA helicase, UvrD-like, C-terminal YPA_RS02650 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS02655 IPR006344 Exodeoxyribonuclease V, alpha subunit YPA_RS02655 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS02655 IPR027785 UvrD-like helicase C-terminal domain YPA_RS02660 IPR000182 GNAT domain YPA_RS02660 IPR001048 Aspartate/glutamate/uridylate kinase YPA_RS02660 IPR010167 Amino-acid N-acetyltransferase (ArgA) YPA_RS02660 IPR016181 Acyl-CoA N-acyltransferase YPA_RS02665 IPR002508 Cell wall hydrolase/autolysin, catalytic YPA_RS02665 IPR021731 AMIN domain YPA_RS02680 IPR005300 Lytic transglycosylase MltA YPA_RS02680 IPR009009 RlpA-like double-psi beta-barrel domain YPA_RS02680 IPR010611 3D domain YPA_RS02680 IPR026044 Membrane-bound lytic murein transglycosylase A YPA_RS02685 IPR000594 UBA/THIF-type NAD/FAD binding fold YPA_RS02685 IPR016040 NAD(P)-binding domain YPA_RS02690 IPR003808 Fe-S metabolism associated domain, SufE-like YPA_RS02690 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE YPA_RS02695 IPR000192 Aminotransferase class V domain YPA_RS02695 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPA_RS02695 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPA_RS02695 IPR015424 Pyridoxal phosphate-dependent transferase YPA_RS02695 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site YPA_RS02695 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA YPA_RS02700 IPR000847 Transcription regulator HTH, LysR YPA_RS02700 IPR005119 LysR, substrate-binding YPA_RS02700 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS02705 IPR006696 Protein of unknown function DUF423 YPA_RS02710 IPR002877 Ribosomal RNA methyltransferase FtsJ domain YPA_RS02710 IPR011224 Ribosomal RNA large subunit methyltransferase M YPA_RS02710 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPA_RS02720 IPR001584 Integrase, catalytic core YPA_RS02720 IPR006120 Resolvase, HTH domain YPA_RS02720 IPR009057 Homeodomain-like YPA_RS02720 IPR012337 Ribonuclease H-like domain YPA_RS02725 IPR001270 ClpA/B family YPA_RS02725 IPR002611 IstB-like ATP-binding protein YPA_RS02725 IPR003593 AAA+ ATPase domain YPA_RS02725 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS02725 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS02730 IPR002421 5'-3' exonuclease, N-terminal YPA_RS02730 IPR008918 Helix-hairpin-helix motif, class 2 YPA_RS02730 IPR020045 5'-3' exonuclease, C-terminal domain YPA_RS02730 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal YPA_RS02730 IPR029060 PIN domain-like YPA_RS02735 IPR021826 Protein of unknown function DUF3412 YPA_RS02735 IPR027820 Domain of unknown function DUF4478 YPA_RS02735 IPR031100 YPA_RS02735 YPA_RS02740 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 YPA_RS02740 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal YPA_RS02740 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF YPA_RS02745 IPR009948 Syd YPA_RS02755 IPR002686 Transposase IS200-like YPA_RS02760 IPR007384 Protein of unknown function UCP006257 YPA_RS02760 IPR023376 YqcC-like domain YPA_RS02765 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F YPA_RS02765 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site YPA_RS02765 IPR020103 Pseudouridine synthase, catalytic domain YPA_RS02770 IPR001094 Flavodoxin YPA_RS02770 IPR008254 Flavodoxin/nitric oxide synthase YPA_RS02770 IPR029039 Flavoprotein-like YPA_RS02775 IPR020911 Uncharacterised protein family UPF0325 YPA_RS02780 IPR001451 Bacterial transferase hexapeptide repeat YPA_RS02780 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family YPA_RS02780 IPR011004 Trimeric LpxA-like YPA_RS02780 IPR018357 Hexapeptide transferase, conserved site YPA_RS02780 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 YPA_RS02785 IPR002912 ACT domain YPA_RS02785 IPR002934 Nucleotidyl transferase domain YPA_RS02785 IPR003607 HD/PDEase domain YPA_RS02785 IPR006674 HD domain YPA_RS02785 IPR010043 Protein-PII uridylyltransferase YPA_RS02785 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase YPA_RS02790 IPR000994 Peptidase M24, structural domain YPA_RS02790 IPR001714 Peptidase M24, methionine aminopeptidase YPA_RS02790 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 YPA_RS02795 IPR001865 Ribosomal protein S2 YPA_RS02795 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid YPA_RS02795 IPR018130 Ribosomal protein S2, conserved site YPA_RS02795 IPR023591 Ribosomal protein S2, flavodoxin-like domain YPA_RS02800 IPR001816 Translation elongation factor EFTs/EF1B YPA_RS02800 IPR009060 UBA-like YPA_RS02800 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation YPA_RS02800 IPR018101 Translation elongation factor Ts, conserved site YPA_RS02810 IPR002686 Transposase IS200-like YPA_RS02815 IPR001048 Aspartate/glutamate/uridylate kinase YPA_RS02815 IPR011817 Uridylate kinase YPA_RS02815 IPR015963 Uridylate kinase, bacteria YPA_RS02820 IPR002661 Ribosome recycling factor YPA_RS02820 IPR023584 Ribosome recycling factor domain YPA_RS02825 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase YPA_RS02825 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal YPA_RS02825 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal YPA_RS02825 IPR016040 NAD(P)-binding domain YPA_RS02825 IPR026877 DXP reductoisomerase C-terminal domain YPA_RS02830 IPR001441 Decaprenyl diphosphate synthase-like YPA_RS02830 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site YPA_RS02835 IPR000374 Phosphatidate cytidylyltransferase YPA_RS02840 IPR001478 PDZ domain YPA_RS02840 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase YPA_RS02840 IPR008915 Peptidase M50 YPA_RS02845 IPR000184 Bacterial surface antigen (D15) YPA_RS02845 IPR010827 Surface antigen variable number YPA_RS02845 IPR023707 Outer membrane protein assembly factor BamA YPA_RS02850 IPR005632 Chaperone protein Skp YPA_RS02850 IPR024930 Skp domain YPA_RS02855 IPR001451 Bacterial transferase hexapeptide repeat YPA_RS02855 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YPA_RS02855 IPR011004 Trimeric LpxA-like YPA_RS02855 IPR018357 Hexapeptide transferase, conserved site YPA_RS02855 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region YPA_RS02860 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ YPA_RS02860 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ YPA_RS02860 IPR029069 HotDog domain YPA_RS02865 IPR001451 Bacterial transferase hexapeptide repeat YPA_RS02865 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase YPA_RS02865 IPR011004 Trimeric LpxA-like YPA_RS02865 IPR018357 Hexapeptide transferase, conserved site YPA_RS02865 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal YPA_RS02870 IPR003835 Glycosyl transferase, family 19 YPA_RS02875 IPR001352 Ribonuclease HII/HIII YPA_RS02875 IPR012337 Ribonuclease H-like domain YPA_RS02875 IPR022898 Ribonuclease HII YPA_RS02875 IPR024567 Ribonuclease HII/HIII domain YPA_RS02880 IPR003141 Polymerase/histidinol phosphatase, N-terminal YPA_RS02880 IPR004013 PHP, C-terminal YPA_RS02880 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type YPA_RS02880 IPR004805 DNA polymerase III, alpha subunit YPA_RS02880 IPR011708 Bacterial DNA polymerase III, alpha subunit YPA_RS02880 IPR012340 Nucleic acid-binding, OB-fold YPA_RS02880 IPR016195 Polymerase/histidinol phosphatase-like YPA_RS02880 IPR029460 DNA polymerase, helix-hairpin-helix motif YPA_RS02885 IPR001095 Acetyl-CoA carboxylase, alpha subunit YPA_RS02885 IPR029045 ClpP/crotonase-like domain YPA_RS02890 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain YPA_RS02890 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase YPA_RS02895 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase YPA_RS02895 IPR012094 Lysidine-tRNA(Ile) synthetase YPA_RS02895 IPR012795 Lysidine-tRNA(Ile) synthetase, N-terminal YPA_RS02895 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal YPA_RS02895 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPA_RS02895 IPR015262 Lysidine-tRNA(Ile) synthetase, substrate-binding domain YPA_RS02895 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 YPA_RS02900 IPR008168 Cytochrome c, class IC YPA_RS02900 IPR009056 Cytochrome c-like domain YPA_RS02905 IPR009778 Modulator of Rho-dependent transcription termination YPA_RS02905 IPR023534 Rof/RNase P-like YPA_RS02910 IPR009624 Uncharacterised protein family UPF0253 YPA_RS02915 IPR009822 YaeQ YPA_RS02915 IPR011335 Restriction endonuclease type II-like YPA_RS02920 IPR000352 Peptide chain release factor class I/class II YPA_RS02925 IPR007298 Copper resistance lipoprotein NlpE YPA_RS02925 IPR033450 YPA_RS02925 YPA_RS02930 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain YPA_RS02930 IPR002316 Proline-tRNA ligase, class IIa YPA_RS02930 IPR004154 Anticodon-binding YPA_RS02930 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type YPA_RS02930 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain YPA_RS02930 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 YPA_RS02935 IPR023368 Uncharacterised protein family UPF0066, conserved site YPA_RS02935 IPR023370 TsaA-like domain YPA_RS02940 IPR030852 YPA_RS02940 YPA_RS02945 IPR004872 Lipoprotein NlpA family YPA_RS02950 IPR000515 MetI-like domain YPA_RS02955 IPR003439 ABC transporter-like YPA_RS02955 IPR003593 AAA+ ATPase domain YPA_RS02955 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria YPA_RS02955 IPR017871 ABC transporter, conserved site YPA_RS02955 IPR018449 NIL domain YPA_RS02955 IPR026253 Methionine import ATP-binding protein MetN YPA_RS02955 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS02960 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase YPA_RS02960 IPR006543 Histidinol-phosphate phosphatase YPA_RS02960 IPR006549 HAD-superfamily hydrolase,subfamily IIIA YPA_RS02960 IPR023214 HAD-like domain YPA_RS02990 IPR001395 Aldo/keto reductase YPA_RS02990 IPR018170 Aldo/keto reductase, conserved site YPA_RS02990 IPR020471 Aldo/keto reductase subgroup YPA_RS02990 IPR023210 NADP-dependent oxidoreductase domain YPA_RS03000 IPR005135 Endonuclease/exonuclease/phosphatase YPA_RS03005 IPR000189 Prokaryotic transglycosylase, active site YPA_RS03005 IPR008258 Lytic transglycosylase-like SLT domain YPA_RS03005 IPR013321 Arc-type ribbon-helix-helix YPA_RS03005 IPR018392 LysM domain YPA_RS03005 IPR023346 Lysozyme-like domain YPA_RS03010 IPR001279 Beta-lactamase-like YPA_RS03010 IPR017782 Hydroxyacylglutathione hydrolase YPA_RS03010 IPR032282 YPA_RS03010 YPA_RS03015 IPR013216 Methyltransferase type 11 YPA_RS03015 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPA_RS03020 IPR002156 Ribonuclease H domain YPA_RS03020 IPR012337 Ribonuclease H-like domain YPA_RS03020 IPR022892 Ribonuclease H YPA_RS03025 IPR006054 DNA polymerase III, epsilon subunit YPA_RS03025 IPR006309 DNA polymerase 3, epsilon subunit YPA_RS03025 IPR012337 Ribonuclease H-like domain YPA_RS03025 IPR013520 Exonuclease, RNase T/DNA polymerase III YPA_RS03035 IPR001248 Permease, cytosine/purines, uracil, thiamine, allantoin YPA_RS03045 IPR002509 Polysaccharide deacetylase YPA_RS03045 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YPA_RS03050 IPR001270 ClpA/B family YPA_RS03050 IPR002611 IstB-like ATP-binding protein YPA_RS03050 IPR003593 AAA+ ATPase domain YPA_RS03050 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS03050 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS03055 IPR001584 Integrase, catalytic core YPA_RS03055 IPR006120 Resolvase, HTH domain YPA_RS03055 IPR009057 Homeodomain-like YPA_RS03055 IPR012337 Ribonuclease H-like domain YPA_RS03065 IPR009241 Addiction module killer protein YPA_RS03065 IPR014056 Addiction module killer protein, predicted YPA_RS03070 IPR010982 Lambda repressor-like, DNA-binding domain YPA_RS03070 IPR014057 Addiction module antidote protein, HI1420 YPA_RS03075 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS03080 IPR002694 Zinc finger, CHC2-type YPA_RS03080 IPR006171 Toprim domain YPA_RS03080 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal YPA_RS03085 IPR018880 Bacteriophage P4, Ash protein YPA_RS03090 IPR010260 Bacteriophage P4, Orf88 YPA_RS03095 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPA_RS03095 IPR013762 Integrase-like, catalytic core YPA_RS03095 IPR023109 Integrase/recombinase, N-terminal YPA_RS03095 IPR024456 Integrase catalytic domain, putative YPA_RS03095 IPR024457 Putative integrase, N-terminal YPA_RS03120 IPR025382 Domain of unknown function DUF4297 YPA_RS03125 IPR002104 Integrase, catalytic YPA_RS03125 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPA_RS03125 IPR013762 Integrase-like, catalytic core YPA_RS03125 IPR023109 Integrase/recombinase, N-terminal YPA_RS03125 IPR025166 Domain of unknown function DUF4102 YPA_RS03130 IPR002686 Transposase IS200-like YPA_RS03140 IPR000037 SsrA-binding protein YPA_RS03140 IPR020081 SsrA-binding protein, conserved site YPA_RS03140 IPR023620 Small protein B YPA_RS03145 IPR005031 Streptomyces cyclase/dehydrase YPA_RS03145 IPR023393 START-like domain YPA_RS03150 IPR005346 RnfH protein YPA_RS03150 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp YPA_RS03155 IPR007450 Lipoprotein SmpA/OmlA YPA_RS03155 IPR026592 Outer membrane protein assembly factor BamE YPA_RS03160 IPR003395 RecF/RecN/SMC, N-terminal YPA_RS03160 IPR004604 DNA recombination/repair protein RecN YPA_RS03160 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS03165 IPR002504 Inorganic polyphosphate/ATP-NAD kinase YPA_RS03165 IPR016064 ATP-NAD kinase-like domain YPA_RS03165 IPR017437 ATP-NAD kinase, PpnK-type, all-beta YPA_RS03165 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 YPA_RS03170 IPR000740 GrpE nucleotide exchange factor YPA_RS03170 IPR009012 GrpE nucleotide exchange factor, head YPA_RS03170 IPR013805 GrpE nucleotide exchange factor, coiled-coil YPA_RS03175 IPR002020 Citrate synthase-like YPA_RS03175 IPR010953 Citrate synthase, type I YPA_RS03175 IPR016142 Citrate synthase-like, large alpha subdomain YPA_RS03175 IPR016143 Citrate synthase-like, small alpha subdomain YPA_RS03175 IPR019810 Citrate synthase active site YPA_RS03175 IPR024176 Citrate synthase, bacterial-type YPA_RS03180 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit YPA_RS03180 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit YPA_RS03180 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site YPA_RS03185 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor YPA_RS03190 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site YPA_RS03190 IPR003953 FAD binding domain YPA_RS03190 IPR011281 Succinate dehydrogenase, flavoprotein subunit YPA_RS03190 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit YPA_RS03190 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal YPA_RS03190 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPA_RS03190 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain YPA_RS03190 IPR030664 YPA_RS03190 YPA_RS03195 IPR001041 2Fe-2S ferredoxin-type domain YPA_RS03195 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein YPA_RS03195 IPR009051 Alpha-helical ferredoxin YPA_RS03195 IPR012675 Beta-grasp domain YPA_RS03195 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPA_RS03195 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal YPA_RS03200 IPR001017 Dehydrogenase, E1 component YPA_RS03200 IPR005475 Transketolase-like, pyrimidine-binding domain YPA_RS03200 IPR011603 2-oxoglutarate dehydrogenase E1 component YPA_RS03200 IPR029061 Thiamin diphosphate-binding fold YPA_RS03200 IPR031717 YPA_RS03200 YPA_RS03200 IPR032106 YPA_RS03200 YPA_RS03205 IPR000089 Biotin/lipoyl attachment YPA_RS03205 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain YPA_RS03205 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site YPA_RS03205 IPR004167 E3 binding YPA_RS03205 IPR006255 Dihydrolipoamide succinyltransferase YPA_RS03205 IPR011053 Single hybrid motif YPA_RS03205 IPR023213 Chloramphenicol acetyltransferase-like domain YPA_RS03210 IPR005809 Succinyl-CoA synthetase, beta subunit YPA_RS03210 IPR005811 ATP-citrate lyase/succinyl-CoA ligase YPA_RS03210 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type YPA_RS03210 IPR013815 ATP-grasp fold, subdomain 1 YPA_RS03210 IPR013816 ATP-grasp fold, subdomain 2 YPA_RS03210 IPR016102 Succinyl-CoA synthetase-like YPA_RS03210 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site YPA_RS03215 IPR003781 CoA-binding YPA_RS03215 IPR005810 Succinyl-CoA ligase, alpha subunit YPA_RS03215 IPR005811 ATP-citrate lyase/succinyl-CoA ligase YPA_RS03215 IPR016040 NAD(P)-binding domain YPA_RS03215 IPR016102 Succinyl-CoA synthetase-like YPA_RS03215 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site YPA_RS03220 IPR002585 Cytochrome d ubiquinol oxidase, subunit I YPA_RS03225 IPR003317 Cytochrome d ubiquinol oxidase, subunit II YPA_RS03230 IPR011724 Cyd operon protein YbgT YPA_RS03230 IPR012994 Membrane bound YbgT-like YPA_RS03235 IPR011846 Cyd operon protein YbgE YPA_RS03240 IPR006683 Thioesterase superfamily YPA_RS03240 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family YPA_RS03240 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase YPA_RS03240 IPR029069 HotDog domain YPA_RS03245 IPR002898 MotA/TolQ/ExbB proton channel YPA_RS03245 IPR014163 Tol-Pal system, TolQ YPA_RS03250 IPR003400 Biopolymer transport protein ExbD/TolR YPA_RS03250 IPR014168 Biopolymer transport, TolR YPA_RS03255 IPR014161 Tol-Pal system, TolA YPA_RS03260 IPR007195 TolB, N-terminal YPA_RS03260 IPR011659 WD40-like Beta Propeller YPA_RS03260 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB YPA_RS03260 IPR015943 WD40/YVTN repeat-like-containing domain YPA_RS03265 IPR006664 Outer membrane protein, bacterial YPA_RS03265 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal YPA_RS03265 IPR006690 Outer membrane protein, OmpA-like, conserved site YPA_RS03265 IPR014169 Peptidoglycan-associated lipoprotein YPA_RS03270 IPR011990 Tetratricopeptide-like helical domain YPA_RS03270 IPR014162 Tol-Pal system, YbgF YPA_RS03270 IPR032519 YPA_RS03270 YPA_RS03290 IPR003473 Quinolinate synthetase A YPA_RS03290 IPR023513 Quinolinate synthase A, type 1 YPA_RS03295 IPR006419 Nicotinamide mononucleotide transporter PnuC YPA_RS03300 IPR002524 Cation efflux protein YPA_RS03300 IPR023500 Zinc transporter ZitB YPA_RS03300 IPR027469 Cation efflux protein transmembrane domain YPA_RS03305 IPR006218 DAHP synthetase I/KDSA YPA_RS03305 IPR006219 DHAP synthase, class 1 YPA_RS03305 IPR013785 Aldolase-type TIM barrel YPA_RS03310 IPR001270 ClpA/B family YPA_RS03310 IPR002611 IstB-like ATP-binding protein YPA_RS03310 IPR003593 AAA+ ATPase domain YPA_RS03310 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS03310 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS03315 IPR001584 Integrase, catalytic core YPA_RS03315 IPR006120 Resolvase, HTH domain YPA_RS03315 IPR009057 Homeodomain-like YPA_RS03315 IPR012337 Ribonuclease H-like domain YPA_RS03320 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal YPA_RS03320 IPR012338 Beta-lactamase/transpeptidase-like YPA_RS03320 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal YPA_RS03320 IPR015956 Penicillin-binding protein-associated YPA_RS03330 IPR004694 Hydroxy amino acid transporter YPA_RS03330 IPR018227 Tryptophan/tyrosine permease YPA_RS03335 IPR001034 HTH DeoR N-terminal domain YPA_RS03335 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS03335 IPR014036 DeoR C-terminal sensor domain YPA_RS03335 IPR018356 Transcription regulator, HTH DeoR-type, conserved site YPA_RS03340 IPR002915 DeoC/FbaB/ lacD aldolase YPA_RS03340 IPR011343 Deoxyribose-phosphate aldolase YPA_RS03340 IPR013785 Aldolase-type TIM barrel YPA_RS03340 IPR028581 Deoxyribose-phosphate aldolase type I YPA_RS03345 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPA_RS03350 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPA_RS03355 IPR006037 Regulator of K+ conductance, C-terminal YPA_RS03355 IPR006512 YidE/YbjL duplication YPA_RS03355 IPR023017 Transport protein YbjL, putative YPA_RS03360 IPR002109 Glutaredoxin YPA_RS03360 IPR011767 Glutaredoxin active site YPA_RS03360 IPR011902 Glutaredoxin, GrxA YPA_RS03360 IPR012336 Thioredoxin-like fold YPA_RS03360 IPR014025 Glutaredoxin subgroup YPA_RS03365 IPR010815 Protein of unknown function DUF1418 YPA_RS03375 IPR019660 Putative sensory transduction regulator YbjN YPA_RS03380 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein YPA_RS03385 IPR003439 ABC transporter-like YPA_RS03385 IPR003593 AAA+ ATPase domain YPA_RS03385 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit YPA_RS03385 IPR008995 Molybdate/tungstate binding, C-terminal YPA_RS03385 IPR013611 Transport-associated OB, type 2 YPA_RS03385 IPR017871 ABC transporter, conserved site YPA_RS03385 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS03390 IPR000515 MetI-like domain YPA_RS03395 IPR000515 MetI-like domain YPA_RS03400 IPR019703 Protein of unknown function DUF2593 YPA_RS03405 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD YPA_RS03405 IPR010280 (Uracil-5)-methyltransferase family YPA_RS03405 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC YPA_RS03405 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPA_RS03405 IPR030390 YPA_RS03405 YPA_RS03405 IPR030391 YPA_RS03405 YPA_RS03410 IPR001320 Ionotropic glutamate receptor YPA_RS03410 IPR001638 Extracellular solute-binding protein, family 3 YPA_RS03410 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein YPA_RS03410 IPR018313 Extracellular solute-binding protein, family 3, conserved site YPA_RS03425 IPR001107 Band 7 protein YPA_RS03425 IPR001972 Stomatin family YPA_RS03430 IPR002491 ABC transporter periplasmic binding domain YPA_RS03440 IPR003439 ABC transporter-like YPA_RS03440 IPR003593 AAA+ ATPase domain YPA_RS03440 IPR017871 ABC transporter, conserved site YPA_RS03440 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS03445 IPR004298 Nicotianamine synthase YPA_RS03445 IPR016040 NAD(P)-binding domain YPA_RS03450 IPR016040 NAD(P)-binding domain YPA_RS03450 IPR016935 Protein of unknown function DUF2338 YPA_RS03455 IPR000620 Drug/metabolite transporter YPA_RS03465 IPR000515 MetI-like domain YPA_RS03465 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family YPA_RS03470 IPR000515 MetI-like domain YPA_RS03470 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family YPA_RS03475 IPR001320 Ionotropic glutamate receptor YPA_RS03475 IPR001638 Extracellular solute-binding protein, family 3 YPA_RS03475 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein YPA_RS03475 IPR018313 Extracellular solute-binding protein, family 3, conserved site YPA_RS03480 IPR003439 ABC transporter-like YPA_RS03480 IPR003593 AAA+ ATPase domain YPA_RS03480 IPR017871 ABC transporter, conserved site YPA_RS03480 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS03480 IPR030679 YPA_RS03480 YPA_RS03485 IPR002701 Chorismate mutase YPA_RS03485 IPR008240 Chorismate mutase, periplasmic YPA_RS03485 IPR020822 Chorismate mutase, type II YPA_RS03490 IPR024289 Domain of unknown function DUF3828 YPA_RS03495 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain YPA_RS03495 IPR016040 NAD(P)-binding domain YPA_RS03500 IPR016040 NAD(P)-binding domain YPA_RS03500 IPR021295 Protein of unknown function DUF2867 YPA_RS03505 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase YPA_RS03505 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPA_RS03505 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPA_RS03505 IPR015424 Pyridoxal phosphate-dependent transferase YPA_RS03505 IPR023603 Threonine aldolase YPA_RS03510 IPR000399 TPP-binding enzyme, conserved site YPA_RS03510 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YPA_RS03510 IPR012000 Thiamine pyrophosphate enzyme, central domain YPA_RS03510 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain YPA_RS03510 IPR029035 DHS-like NAD/FAD-binding domain YPA_RS03510 IPR029061 Thiamin diphosphate-binding fold YPA_RS03515 IPR001041 2Fe-2S ferredoxin-type domain YPA_RS03515 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPA_RS03515 IPR001834 NADH:cytochrome b5 reductase (CBR) YPA_RS03515 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site YPA_RS03515 IPR008333 Oxidoreductase, FAD-binding domain YPA_RS03515 IPR012675 Beta-grasp domain YPA_RS03515 IPR017938 Riboflavin synthase-like beta-barrel YPA_RS03520 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase YPA_RS03520 IPR010048 Hydroxylamine reductase YPA_RS03520 IPR011254 Prismane-like YPA_RS03520 IPR016099 Prismane-like, alpha/beta-sandwich YPA_RS03520 IPR016100 Prismane, alpha-bundle YPA_RS03525 IPR005642 Protein of unknown function DUF340, prokaryotic membrane YPA_RS03530 IPR022602 Protein of unknown function DUF2813 YPA_RS03530 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS03535 IPR007488 Protein of unknown function DUF535 YPA_RS03540 IPR006143 RND efflux pump, membrane fusion protein YPA_RS03540 IPR030190 YPA_RS03540 YPA_RS03540 IPR032317 YPA_RS03540 YPA_RS03545 IPR003439 ABC transporter-like YPA_RS03545 IPR003593 AAA+ ATPase domain YPA_RS03545 IPR003838 Permease FtsX-like YPA_RS03545 IPR017871 ABC transporter, conserved site YPA_RS03545 IPR025857 MacB-like periplasmic core domain YPA_RS03545 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS03550 IPR002059 Cold-shock protein, DNA-binding YPA_RS03550 IPR011129 Cold shock protein YPA_RS03550 IPR012340 Nucleic acid-binding, OB-fold YPA_RS03550 IPR012751 CspD, cold shock YPA_RS03550 IPR019844 Cold-shock conserved site YPA_RS03555 IPR003769 Adaptor protein ClpS, core YPA_RS03555 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like YPA_RS03555 IPR022935 ATP-dependent Clp protease adaptor protein ClpS YPA_RS03560 IPR001270 ClpA/B family YPA_RS03560 IPR003593 AAA+ ATPase domain YPA_RS03560 IPR003959 ATPase, AAA-type, core YPA_RS03560 IPR004176 Clp, N-terminal YPA_RS03560 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA YPA_RS03560 IPR018368 ClpA/B, conserved site 1 YPA_RS03560 IPR019489 Clp ATPase, C-terminal YPA_RS03560 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS03560 IPR028299 ClpA/B, conserved site 2 YPA_RS03565 IPR002686 Transposase IS200-like YPA_RS03570 IPR004368 Translation initiation factor IF-1 YPA_RS03570 IPR006196 RNA-binding domain, S1, IF1 type YPA_RS03570 IPR012340 Nucleic acid-binding, OB-fold YPA_RS03570 IPR022967 RNA-binding domain, S1 YPA_RS03575 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase YPA_RS03575 IPR016181 Acyl-CoA N-acyltransferase YPA_RS03580 IPR003439 ABC transporter-like YPA_RS03580 IPR003593 AAA+ ATPase domain YPA_RS03580 IPR011527 ABC transporter type 1, transmembrane domain YPA_RS03580 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC YPA_RS03580 IPR017871 ABC transporter, conserved site YPA_RS03580 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS03585 IPR003439 ABC transporter-like YPA_RS03585 IPR003593 AAA+ ATPase domain YPA_RS03585 IPR011527 ABC transporter type 1, transmembrane domain YPA_RS03585 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD YPA_RS03585 IPR017871 ABC transporter, conserved site YPA_RS03585 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS03595 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II YPA_RS03595 IPR005982 Thioredoxin reductase YPA_RS03595 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site YPA_RS03595 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPA_RS03600 IPR000485 AsnC-type HTH domain YPA_RS03600 IPR011008 Dimeric alpha-beta barrel YPA_RS03600 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS03600 IPR019885 Transcription regulator HTH, AsnC-type, conserved site YPA_RS03600 IPR019887 Transcription regulator AsnC-type, C-terminal YPA_RS03600 IPR019888 Transcription regulator AsnC-type YPA_RS03605 IPR002543 FtsK domain YPA_RS03605 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS03605 IPR018541 FtsK gamma domain YPA_RS03605 IPR025199 Domain of unknown function DUF4117 YPA_RS03605 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS03610 IPR004564 Outer membrane lipoprotein carrier protein LolA-like YPA_RS03610 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria YPA_RS03610 IPR029046 Lipoprotein localisation LolA/LolB/LppX YPA_RS03615 IPR003593 AAA+ ATPase domain YPA_RS03615 IPR003959 ATPase, AAA-type, core YPA_RS03615 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal YPA_RS03615 IPR021886 MgsA AAA+ ATPase C-terminal YPA_RS03615 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS03615 IPR032423 YPA_RS03615 YPA_RS03620 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain YPA_RS03620 IPR002317 Serine-tRNA ligase, type1 YPA_RS03620 IPR010978 tRNA-binding arm YPA_RS03620 IPR015866 Serine-tRNA synthetase, type1, N-terminal YPA_RS03630 IPR001989 Radical-activating enzyme, conserved site YPA_RS03630 IPR007197 Radical SAM YPA_RS03630 IPR012838 Pyruvate formate-lyase activating enzyme YPA_RS03635 IPR002654 Glycosyl transferase, family 25 YPA_RS03640 IPR001150 Glycine radical domain YPA_RS03640 IPR004184 Pyruvate formate lyase domain YPA_RS03640 IPR005949 Formate acetyltransferase YPA_RS03640 IPR019777 Formate C-acetyltransferase glycine radical, conserved site YPA_RS03645 IPR000292 Formate/nitrite transporter YPA_RS03645 IPR023271 Aquaporin-like YPA_RS03645 IPR023999 Formate transporter FocA, putative YPA_RS03645 IPR024002 Formate/nitrite transporter, conserved site YPA_RS03650 IPR003776 YcaO-like domain YPA_RS03655 IPR004550 L-asparaginase, type II YPA_RS03655 IPR006034 Asparaginase/glutaminase YPA_RS03655 IPR020827 Asparaginase/glutaminase, active site 1 YPA_RS03655 IPR027473 L-asparaginase, C-terminal domain YPA_RS03655 IPR027474 L-asparaginase, N-terminal YPA_RS03655 IPR027475 Asparaginase/glutaminase, active site 2 YPA_RS03660 IPR005594 YadA-like, C-terminal YPA_RS03660 IPR008126 Outer membrane adhesion, Yersinia YPA_RS03660 IPR008635 Coiled stalk of trimeric autotransporter adhesin YPA_RS03660 IPR011049 Serralysin-like metalloprotease, C-terminal YPA_RS03665 IPR005594 YadA-like, C-terminal YPA_RS03665 IPR011049 Serralysin-like metalloprotease, C-terminal YPA_RS03670 IPR000192 Aminotransferase class V domain YPA_RS03670 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPA_RS03670 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPA_RS03670 IPR015424 Pyridoxal phosphate-dependent transferase YPA_RS03670 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site YPA_RS03670 IPR022278 Phosphoserine aminotransferase YPA_RS03675 IPR001986 Enolpyruvate transferase domain YPA_RS03675 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase YPA_RS03675 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta YPA_RS03675 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site YPA_RS03680 IPR003136 Cytidylate kinase YPA_RS03680 IPR011994 Cytidylate kinase domain YPA_RS03680 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS03685 IPR000110 Ribosomal protein S1 YPA_RS03685 IPR003029 Ribosomal protein S1, RNA-binding domain YPA_RS03685 IPR012340 Nucleic acid-binding, OB-fold YPA_RS03685 IPR022967 RNA-binding domain, S1 YPA_RS03690 IPR000119 Histone-like bacterial DNA-binding protein YPA_RS03690 IPR005685 Integration host factor, beta subunit YPA_RS03690 IPR010992 Integration host factor (IHF)-like DNA-binding domain YPA_RS03690 IPR020816 Histone-like DNA-binding protein, conserved site YPA_RS03700 IPR001279 Beta-lactamase-like YPA_RS03700 IPR004477 ComEC/Rec2-related protein YPA_RS03700 IPR004797 Competence protein ComEC/Rec2 YPA_RS03700 IPR025405 Domain of unknown function DUF4131 YPA_RS03705 IPR003439 ABC transporter-like YPA_RS03705 IPR003593 AAA+ ATPase domain YPA_RS03705 IPR011527 ABC transporter type 1, transmembrane domain YPA_RS03705 IPR011917 ABC transporter, lipid A export, MsbA YPA_RS03705 IPR017871 ABC transporter, conserved site YPA_RS03705 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS03710 IPR003758 Tetraacyldisaccharide 4'-kinase YPA_RS03710 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS03720 IPR001270 ClpA/B family YPA_RS03720 IPR002611 IstB-like ATP-binding protein YPA_RS03720 IPR003593 AAA+ ATPase domain YPA_RS03720 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS03720 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS03725 IPR001584 Integrase, catalytic core YPA_RS03725 IPR006120 Resolvase, HTH domain YPA_RS03725 IPR009057 Homeodomain-like YPA_RS03725 IPR012337 Ribonuclease H-like domain YPA_RS03730 IPR009770 Domain of unknown function DUF1338 YPA_RS03735 IPR002059 Cold-shock protein, DNA-binding YPA_RS03735 IPR011129 Cold shock protein YPA_RS03735 IPR012156 Cold shock, CspA YPA_RS03735 IPR012340 Nucleic acid-binding, OB-fold YPA_RS03740 IPR005651 Uncharacterised protein family UPF0434/Trm112 YPA_RS03745 IPR003329 Acylneuraminate cytidylyltransferase YPA_RS03745 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase YPA_RS03745 IPR029044 Nucleotide-diphospho-sugar transferases YPA_RS03755 IPR011009 Protein kinase-like domain YPA_RS03755 IPR016477 Fructosamine/Ketosamine-3-kinase YPA_RS03765 IPR025714 Methyltransferase domain YPA_RS03765 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPA_RS03770 IPR005582 Chromosome partition protein MukF YPA_RS03770 IPR010916 TonB box, conserved site YPA_RS03770 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS03770 IPR033439 YPA_RS03770 YPA_RS03770 IPR033440 YPA_RS03770 YPA_RS03770 IPR033441 YPA_RS03770 YPA_RS03775 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE YPA_RS03780 IPR007406 MukB, N-terminal domain YPA_RS03780 IPR009053 Prefoldin YPA_RS03780 IPR012090 Chromosome partition protein MukB YPA_RS03780 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS03780 IPR032520 YPA_RS03780 YPA_RS03790 IPR002686 Transposase IS200-like YPA_RS03795 IPR002477 Peptidoglycan binding-like YPA_RS03795 IPR005490 L,D-transpeptidase catalytic domain YPA_RS03800 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain YPA_RS03800 IPR010275 Protein of unknown function DUF882 YPA_RS03805 IPR001279 Beta-lactamase-like YPA_RS03810 IPR000796 Aspartate/other aminotransferase YPA_RS03810 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site YPA_RS03810 IPR004839 Aminotransferase, class I/classII YPA_RS03810 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPA_RS03810 IPR015424 Pyridoxal phosphate-dependent transferase YPA_RS03820 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb YPA_RS03820 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) YPA_RS03820 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type YPA_RS03820 IPR004522 Asparagine-tRNA ligase YPA_RS03820 IPR012340 Nucleic acid-binding, OB-fold YPA_RS03820 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like YPA_RS03825 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal YPA_RS03825 IPR006406 Nicotinate phosphoribosyltransferase YPA_RS03825 IPR007229 Nicotinate phosphoribosyltransferase family YPA_RS03830 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase YPA_RS03830 IPR012779 Peptidase M1, alanyl aminopeptidase YPA_RS03830 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal YPA_RS03830 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal YPA_RS03835 IPR001295 Dihydroorotate dehydrogenase, conserved site YPA_RS03835 IPR005719 Dihydroorotate dehydrogenase, class 2 YPA_RS03835 IPR005720 Dihydroorotate dehydrogenase domain YPA_RS03835 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 YPA_RS03835 IPR013785 Aldolase-type TIM barrel YPA_RS03840 IPR009809 Cell division protein ZapC YPA_RS03845 IPR001041 2Fe-2S ferredoxin-type domain YPA_RS03845 IPR005302 Molybdenum cofactor sulfurase, C-terminal YPA_RS03845 IPR005303 MOSC, N-terminal beta barrel YPA_RS03845 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site YPA_RS03845 IPR011037 Pyruvate kinase-like, insert domain YPA_RS03845 IPR012675 Beta-grasp domain YPA_RS03850 IPR000241 Putative RNA methylase domain YPA_RS03850 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPA_RS03850 IPR004114 THUMP YPA_RS03850 IPR017244 Ribosomal RNA large subunit methyltransferase K/L YPA_RS03850 IPR019614 S-adenosylmethionine-dependent methyltransferase YPA_RS03850 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPA_RS03855 IPR003439 ABC transporter-like YPA_RS03855 IPR003593 AAA+ ATPase domain YPA_RS03855 IPR017871 ABC transporter, conserved site YPA_RS03855 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS03855 IPR032524 YPA_RS03855 YPA_RS03855 IPR032781 YPA_RS03855 YPA_RS03860 IPR005219 Conserved hypothetical protein CHP00155 YPA_RS03860 IPR007498 Paraquat-inducible protein A YPA_RS03865 IPR003399 Mammalian cell entry-related YPA_RS03870 IPR005586 Protein of unknown function DUF330 YPA_RS03880 IPR007040 Ribosome modulation factor YPA_RS03880 IPR023200 Ribosome modulation factor-like domain YPA_RS03890 IPR002686 Transposase IS200-like YPA_RS03895 IPR014030 Beta-ketoacyl synthase, N-terminal YPA_RS03895 IPR014031 Beta-ketoacyl synthase, C-terminal YPA_RS03895 IPR016039 Thiolase-like YPA_RS03895 IPR018201 Beta-ketoacyl synthase, active site YPA_RS03895 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPA_RS03900 IPR001270 ClpA/B family YPA_RS03900 IPR002611 IstB-like ATP-binding protein YPA_RS03900 IPR003593 AAA+ ATPase domain YPA_RS03900 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS03900 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS03905 IPR001584 Integrase, catalytic core YPA_RS03905 IPR006120 Resolvase, HTH domain YPA_RS03905 IPR009057 Homeodomain-like YPA_RS03905 IPR012337 Ribonuclease H-like domain YPA_RS03910 IPR014030 Beta-ketoacyl synthase, N-terminal YPA_RS03910 IPR016039 Thiolase-like YPA_RS03920 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA YPA_RS03920 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ YPA_RS03920 IPR029069 HotDog domain YPA_RS03925 IPR008269 Peptidase S16, Lon C-terminal YPA_RS03925 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPA_RS03925 IPR020568 Ribosomal protein S5 domain 2-type fold YPA_RS03925 IPR027065 Lon protease YPA_RS03930 IPR009390 Macrodomain Ter protein, MatP YPA_RS03935 IPR002686 Transposase IS200-like YPA_RS03945 IPR000498 Outer membrane protein, OmpA-like, transmembrane domain YPA_RS03945 IPR002368 Outer membrane protein, OmpA YPA_RS03945 IPR006664 Outer membrane protein, bacterial YPA_RS03945 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal YPA_RS03945 IPR006690 Outer membrane protein, OmpA-like, conserved site YPA_RS03945 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel YPA_RS03950 IPR004596 Cell division suppressor protein, SulA YPA_RS03950 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS03955 IPR007076 TfoX, N-terminal YPA_RS03955 IPR007077 TfoX, C-terminal YPA_RS03955 IPR026256 Transcriptional regulator, TfoX/Sxy-type YPA_RS03960 IPR010019 Integral membrane protein, YccS YPA_RS03960 IPR010020 Integral membrane protein, YccS/YhfK YPA_RS03960 IPR032692 YPA_RS03960 YPA_RS03965 IPR005185 Protein of unknown function DUF307 YPA_RS03965 IPR031308 YPA_RS03965 YPA_RS03970 IPR000212 DNA helicase, UvrD/REP type YPA_RS03970 IPR014016 UvrD-like Helicase, ATP-binding domain YPA_RS03970 IPR014017 DNA helicase, UvrD-like, C-terminal YPA_RS03970 IPR022161 DNA helicase IV, N-terminal domain YPA_RS03970 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS03975 IPR004363 Methylglyoxal synthase YPA_RS03975 IPR011607 Methylglyoxal synthase-like domain YPA_RS03975 IPR018148 Methylglyoxal synthase, active site YPA_RS03980 IPR018635 Uncharacterised protein family UPF0319 YPA_RS03985 IPR003781 CoA-binding YPA_RS03985 IPR016040 NAD(P)-binding domain YPA_RS03990 IPR011722 Hemimethylated DNA-binding domain YPA_RS03990 IPR022866 Heat shock protein HspQ YPA_RS03995 IPR002478 PUA domain YPA_RS03995 IPR015947 PUA-like domain YPA_RS03995 IPR019614 S-adenosylmethionine-dependent methyltransferase YPA_RS03995 IPR023542 rRNA large subunit methyltransferase I YPA_RS03995 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPA_RS04000 IPR001792 Acylphosphatase-like domain YPA_RS04000 IPR017968 Acylphosphatase, conserved site YPA_RS04000 IPR020456 Acylphosphatase YPA_RS04000 IPR028627 Acylphosphatase, bacteria YPA_RS04005 IPR007453 Sulphur transfer protein DsrC/TusE YPA_RS04005 IPR025526 DsrC-like domain YPA_RS04015 IPR012337 Ribonuclease H-like domain YPA_RS04015 IPR032874 YPA_RS04015 YPA_RS04035 IPR006093 Oxygen oxidoreductase covalent FAD-binding site YPA_RS04035 IPR006094 FAD linked oxidase, N-terminal YPA_RS04035 IPR016166 FAD-binding, type 2 YPA_RS04035 IPR016167 FAD-binding, type 2, subdomain 1 YPA_RS04035 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 YPA_RS04035 IPR016181 Acyl-CoA N-acyltransferase YPA_RS04040 IPR002347 Glucose/ribitol dehydrogenase YPA_RS04040 IPR016040 NAD(P)-binding domain YPA_RS04040 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPA_RS04050 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ YPA_RS04050 IPR029069 HotDog domain YPA_RS04055 IPR014030 Beta-ketoacyl synthase, N-terminal YPA_RS04055 IPR014031 Beta-ketoacyl synthase, C-terminal YPA_RS04055 IPR016039 Thiolase-like YPA_RS04055 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPA_RS04060 IPR002347 Glucose/ribitol dehydrogenase YPA_RS04060 IPR016040 NAD(P)-binding domain YPA_RS04060 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPA_RS04065 IPR013528 Hydroxymethylglutaryl-coenzyme A synthase, N-terminal YPA_RS04065 IPR013746 Hydroxymethylglutaryl-coenzyme A synthase C-terminal domain YPA_RS04065 IPR016039 Thiolase-like YPA_RS04070 IPR001753 Crotonase superfamily YPA_RS04070 IPR029045 ClpP/crotonase-like domain YPA_RS04075 IPR001753 Crotonase superfamily YPA_RS04075 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site YPA_RS04075 IPR029045 ClpP/crotonase-like domain YPA_RS04080 IPR002347 Glucose/ribitol dehydrogenase YPA_RS04080 IPR016040 NAD(P)-binding domain YPA_RS04085 IPR024311 Lipocalin-like domain YPA_RS04090 IPR009081 Acyl carrier protein-like YPA_RS04095 IPR001227 Acyl transferase domain YPA_RS04095 IPR014043 Acyl transferase YPA_RS04095 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase YPA_RS04095 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding YPA_RS04095 IPR020801 Polyketide synthase, acyl transferase domain YPA_RS04095 IPR024925 Malonyl CoA-acyl carrier protein transacylase YPA_RS04105 IPR001584 Integrase, catalytic core YPA_RS04105 IPR006120 Resolvase, HTH domain YPA_RS04105 IPR009057 Homeodomain-like YPA_RS04105 IPR012337 Ribonuclease H-like domain YPA_RS04110 IPR001270 ClpA/B family YPA_RS04110 IPR002611 IstB-like ATP-binding protein YPA_RS04110 IPR003593 AAA+ ATPase domain YPA_RS04110 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS04110 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS04115 IPR008312 Uncharacterised conserved protein UCP028301 YPA_RS04120 IPR010269 Protein of unknown function DUF877 YPA_RS04125 IPR010263 Protein of unknown function DUF876 YPA_RS04130 IPR017732 Type IV / VI secretion system, DotU YPA_RS04135 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal YPA_RS04140 IPR008514 Type VI secretion system effector, Hcp YPA_RS04145 IPR001270 ClpA/B family YPA_RS04145 IPR003593 AAA+ ATPase domain YPA_RS04145 IPR003959 ATPase, AAA-type, core YPA_RS04145 IPR004176 Clp, N-terminal YPA_RS04145 IPR017729 Type VI secretion system, ATPase ClpV1 YPA_RS04145 IPR018368 ClpA/B, conserved site 1 YPA_RS04145 IPR019489 Clp ATPase, C-terminal YPA_RS04145 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS04150 IPR006531 Gp5 N-terminal YPA_RS04150 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPA_RS04150 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPA_RS04150 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal YPA_RS04150 IPR027440 Capsid protein alpha-like domain YPA_RS04150 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain YPA_RS04155 IPR011055 Duplicated hybrid motif YPA_RS04155 IPR016047 Peptidase M23 YPA_RS04155 IPR023346 Lysozyme-like domain YPA_RS04165 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal YPA_RS04170 IPR011055 Duplicated hybrid motif YPA_RS04170 IPR016047 Peptidase M23 YPA_RS04170 IPR023346 Lysozyme-like domain YPA_RS04180 IPR025959 Winged helix-turn helix domain YPA_RS04190 IPR009612 ImcF-related YPA_RS04190 IPR010623 Domain of unknown function DUF1215 YPA_RS04200 IPR008727 PAAR motif YPA_RS04200 IPR028946 Putative toxin 60 YPA_RS04210 IPR010272 Type VI secretion system, VCA0110 YPA_RS04215 IPR010732 Protein of unknown function DUF1305 YPA_RS04220 IPR017734 Type VI secretion system, lipoprotein SciN YPA_RS04225 IPR007048 GpW/Gp25/anti-adapter protein IraD YPA_RS04225 IPR017737 Type VI secretion system, lysozyme-related protein YPA_RS04230 IPR010657 ImpA, N-terminal YPA_RS04230 IPR021069 ImpA, C-terminal YPA_RS04235 IPR031829 YPA_RS04235 YPA_RS04240 IPR003439 ABC transporter-like YPA_RS04240 IPR003593 AAA+ ATPase domain YPA_RS04240 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS04240 IPR032781 YPA_RS04240 YPA_RS04245 IPR031829 YPA_RS04245 YPA_RS04250 IPR001207 Transposase, mutator type YPA_RS04255 IPR000594 UBA/THIF-type NAD/FAD binding fold YPA_RS04255 IPR012730 Molybdopterin synthase sulfurylase MoeB YPA_RS04255 IPR016040 NAD(P)-binding domain YPA_RS04260 IPR001453 Molybdopterin binding domain YPA_RS04260 IPR005110 MoeA, N-terminal and linker domain YPA_RS04260 IPR005111 MoeA, C-terminal, domain IV YPA_RS04260 IPR008284 Molybdenum cofactor biosynthesis, conserved site YPA_RS04265 IPR007197 Radical SAM YPA_RS04265 IPR013785 Aldolase-type TIM barrel YPA_RS04265 IPR023885 4Fe4S-binding SPASM domain YPA_RS04270 IPR003439 ABC transporter-like YPA_RS04270 IPR003593 AAA+ ATPase domain YPA_RS04270 IPR017871 ABC transporter, conserved site YPA_RS04270 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS04295 IPR000801 Putative esterase YPA_RS04295 IPR014186 S-formylglutathione hydrolase YPA_RS04295 IPR029058 Alpha/Beta hydrolase fold YPA_RS04300 IPR002085 Alcohol dehydrogenase superfamily, zinc-type YPA_RS04300 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site YPA_RS04300 IPR011032 GroES (chaperonin 10)-like YPA_RS04300 IPR013149 Alcohol dehydrogenase, C-terminal YPA_RS04300 IPR013154 Alcohol dehydrogenase GroES-like YPA_RS04300 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase YPA_RS04300 IPR016040 NAD(P)-binding domain YPA_RS04300 IPR020843 Polyketide synthase, enoylreductase YPA_RS04305 IPR000847 Transcription regulator HTH, LysR YPA_RS04305 IPR005119 LysR, substrate-binding YPA_RS04305 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS04310 IPR010645 Domain of unknown function DUF1228 YPA_RS04310 IPR020846 Major facilitator superfamily domain YPA_RS04315 IPR001474 GTP cyclohydrolase I YPA_RS04315 IPR018234 GTP cyclohydrolase I, conserved site YPA_RS04315 IPR020602 GTP cyclohydrolase I domain YPA_RS04320 IPR007349 Domain of unknown function DUF418 YPA_RS04325 IPR025997 Periplasmic binding protein domain YPA_RS04325 IPR028082 Periplasmic binding protein-like I YPA_RS04330 IPR003439 ABC transporter-like YPA_RS04330 IPR003593 AAA+ ATPase domain YPA_RS04330 IPR017871 ABC transporter, conserved site YPA_RS04330 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS04335 IPR001851 ABC transporter, permease YPA_RS04335 IPR030158 YPA_RS04335 YPA_RS04340 IPR003848 Domain of unknown function DUF218 YPA_RS04340 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPA_RS04340 IPR023604 Uncharacterised protein family SanA YPA_RS04345 IPR001891 Malic oxidoreductase YPA_RS04345 IPR012301 Malic enzyme, N-terminal domain YPA_RS04345 IPR012302 Malic enzyme, NAD-binding YPA_RS04345 IPR015884 Malic enzyme, conserved site YPA_RS04345 IPR016040 NAD(P)-binding domain YPA_RS04345 IPR023667 NAD-dependent malic enzyme, proteobacteria YPA_RS04350 IPR002125 CMP/dCMP deaminase, zinc-binding YPA_RS04350 IPR006263 Cytidine deaminase, homodimeric YPA_RS04350 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain YPA_RS04350 IPR016192 APOBEC/CMP deaminase, zinc-binding YPA_RS04350 IPR016193 Cytidine deaminase-like YPA_RS04350 IPR020797 Cytidine deaminase, bacteria YPA_RS04355 IPR005261 Conserved hypothetical protein CHP00659 YPA_RS04355 IPR007300 CidB/LrgB family YPA_RS04360 IPR005538 LrgA/CidA family YPA_RS04360 IPR022957 Uncharacterised protein family UPF0299 YPA_RS04365 IPR011701 Major facilitator superfamily YPA_RS04365 IPR020846 Major facilitator superfamily domain YPA_RS04370 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain YPA_RS04370 IPR013211 LVIVD YPA_RS04375 IPR025997 Periplasmic binding protein domain YPA_RS04375 IPR028082 Periplasmic binding protein-like I YPA_RS04390 IPR002686 Transposase IS200-like YPA_RS04395 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPA_RS04395 IPR002547 tRNA-binding domain YPA_RS04395 IPR004495 Methionyl-tRNA synthetase, class Ia, beta subunit, C-terminal YPA_RS04395 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding YPA_RS04395 IPR012340 Nucleic acid-binding, OB-fold YPA_RS04395 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPA_RS04395 IPR014758 Methionyl-tRNA synthetase YPA_RS04395 IPR015413 Methionyl/Leucyl tRNA synthetase YPA_RS04395 IPR023458 Methionine-tRNA ligase, type 1 YPA_RS04395 IPR029038 Methionyl-tRNA synthetase, Zn-domain YPA_RS04400 IPR000808 Mrp, conserved site YPA_RS04400 IPR019591 Mrp/NBP35 ATP-binding protein YPA_RS04400 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS04405 IPR000764 Uridine kinase like YPA_RS04405 IPR006083 Phosphoribulokinase/uridine kinase YPA_RS04405 IPR026008 Uridine kinase YPA_RS04405 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS04410 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase YPA_RS04410 IPR011962 Deoxycytidine triphosphate deaminase YPA_RS04410 IPR029054 dUTPase-like YPA_RS04415 IPR007844 AsmA YPA_RS04415 IPR032712 YPA_RS04415 YPA_RS04420 IPR000644 CBS domain YPA_RS04420 IPR005170 Transporter-associated domain YPA_RS04420 IPR005496 Integral membrane protein TerC YPA_RS04420 IPR016166 FAD-binding, type 2 YPA_RS04420 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 YPA_RS04425 IPR008090 Ferric iron reductase YPA_RS04425 IPR022770 Ferric iron reductase FhuF domain YPA_RS04425 IPR024726 Ferric iron reductase, C-terminal YPA_RS04430 IPR002129 Pyridoxal phosphate-dependent decarboxylase YPA_RS04430 IPR010977 Aromatic-L-amino-acid decarboxylase YPA_RS04430 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPA_RS04430 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPA_RS04430 IPR015424 Pyridoxal phosphate-dependent transferase YPA_RS04435 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPA_RS04435 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase YPA_RS04440 IPR016181 Acyl-CoA N-acyltransferase YPA_RS04440 IPR019432 Siderophore biosynthesis protein, conserved domain YPA_RS04445 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal YPA_RS04445 IPR022770 Ferric iron reductase FhuF domain YPA_RS04450 IPR003439 ABC transporter-like YPA_RS04450 IPR003593 AAA+ ATPase domain YPA_RS04450 IPR017871 ABC transporter, conserved site YPA_RS04450 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS04455 IPR000522 ABC transporter, permease protein YPA_RS04455 IPR029022 ABC transporter, BtuC-like YPA_RS04460 IPR000522 ABC transporter, permease protein YPA_RS04460 IPR029022 ABC transporter, BtuC-like YPA_RS04465 IPR002491 ABC transporter periplasmic binding domain YPA_RS04470 IPR000531 TonB-dependent receptor, beta-barrel YPA_RS04470 IPR010105 TonB-dependent siderophore receptor YPA_RS04470 IPR010917 TonB-dependent receptor, conserved site YPA_RS04470 IPR012910 TonB-dependent receptor, plug YPA_RS04480 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type YPA_RS04480 IPR005835 Nucleotidyl transferase YPA_RS04480 IPR029044 Nucleotide-diphospho-sugar transferases YPA_RS04485 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type YPA_RS04485 IPR005835 Nucleotidyl transferase YPA_RS04485 IPR029044 Nucleotide-diphospho-sugar transferases YPA_RS04490 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating YPA_RS04490 IPR006114 6-phosphogluconate dehydrogenase, C-terminal YPA_RS04490 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding YPA_RS04490 IPR006183 YPA_RS04490 YPA_RS04490 IPR006184 6-phosphogluconate-binding site YPA_RS04490 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YPA_RS04490 IPR012284 Fibritin/6-phosphogluconate dehydrogenase, C-terminal extension YPA_RS04490 IPR013328 Dehydrogenase, multihelical YPA_RS04490 IPR016040 NAD(P)-binding domain YPA_RS04495 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain YPA_RS04495 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase YPA_RS04495 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like YPA_RS04495 IPR023019 Histidine biosynthesis bifunctional protein HisIE YPA_RS04500 IPR004651 Histidine biosynthesis, HisF YPA_RS04500 IPR006062 Histidine biosynthesis YPA_RS04500 IPR011060 Ribulose-phosphate binding barrel YPA_RS04500 IPR013785 Aldolase-type TIM barrel YPA_RS04505 IPR006062 Histidine biosynthesis YPA_RS04505 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA YPA_RS04505 IPR011060 Ribulose-phosphate binding barrel YPA_RS04505 IPR013785 Aldolase-type TIM barrel YPA_RS04505 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase YPA_RS04510 IPR010139 Imidazole glycerol phosphate synthase, subunit H YPA_RS04510 IPR017926 Glutamine amidotransferase YPA_RS04510 IPR029062 Class I glutamine amidotransferase-like YPA_RS04515 IPR000807 Imidazoleglycerol-phosphate dehydratase YPA_RS04515 IPR005954 Histidinol-phosphatase YPA_RS04515 IPR006543 Histidinol-phosphate phosphatase YPA_RS04515 IPR006549 HAD-superfamily hydrolase,subfamily IIIA YPA_RS04515 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site YPA_RS04515 IPR020566 Histidine biosynthesis bifunctional protein HisB YPA_RS04515 IPR020568 Ribosomal protein S5 domain 2-type fold YPA_RS04515 IPR023214 HAD-like domain YPA_RS04520 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site YPA_RS04520 IPR004839 Aminotransferase, class I/classII YPA_RS04520 IPR005861 Histidinol-phosphate aminotransferase family YPA_RS04520 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPA_RS04520 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPA_RS04520 IPR015424 Pyridoxal phosphate-dependent transferase YPA_RS04525 IPR001692 Histidinol dehydrogenase, conserved site YPA_RS04525 IPR012131 Histidinol dehydrogenase YPA_RS04525 IPR016161 Aldehyde/histidinol dehydrogenase YPA_RS04525 IPR022695 Histidinol dehydrogenase, monofunctional YPA_RS04530 IPR001348 ATP phosphoribosyltransferase HisG YPA_RS04530 IPR011322 Nitrogen regulatory PII-like, alpha/beta YPA_RS04530 IPR013115 Histidine biosynthesis HisG, C-terminal YPA_RS04530 IPR013820 ATP phosphoribosyltransferase, catalytic domain YPA_RS04530 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal YPA_RS04530 IPR018198 ATP phosphoribosyltransferase, conserved site YPA_RS04530 IPR020621 ATP phosphoribosyltransferase HisG, long form YPA_RS04535 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain YPA_RS04535 IPR016040 NAD(P)-binding domain YPA_RS04540 IPR032032 YPA_RS04540 YPA_RS04545 IPR001851 ABC transporter, permease YPA_RS04550 IPR003439 ABC transporter-like YPA_RS04550 IPR003593 AAA+ ATPase domain YPA_RS04550 IPR017871 ABC transporter, conserved site YPA_RS04550 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS04555 IPR003439 ABC transporter-like YPA_RS04555 IPR003593 AAA+ ATPase domain YPA_RS04555 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS04560 IPR001670 Alcohol dehydrogenase, iron-type YPA_RS04560 IPR018211 Alcohol dehydrogenase, iron-type, conserved site YPA_RS04570 IPR002293 Amino acid/polyamine transporter I YPA_RS04575 IPR012337 Ribonuclease H-like domain YPA_RS04575 IPR013520 Exonuclease, RNase T/DNA polymerase III YPA_RS04575 IPR013620 Exonuclease C-terminal YPA_RS04575 IPR023607 Exodeoxyribonuclease I YPA_RS04580 IPR013120 Male sterility, NAD-binding YPA_RS04580 IPR016040 NAD(P)-binding domain YPA_RS04585 IPR007458 Protein of unknown function DUF496 YPA_RS04590 IPR001207 Transposase, mutator type YPA_RS04595 IPR003344 Bacterial Ig-like, group 1 YPA_RS04595 IPR003535 Intimin/invasin bacterial adhesion mediator protein YPA_RS04595 IPR008964 Invasin/intimin cell-adhesion YPA_RS04595 IPR015217 Invasin, domain 3 YPA_RS04595 IPR016186 C-type lectin-like YPA_RS04595 IPR024519 Domain of unknown function DUF3442, intimin/invasin YPA_RS04600 IPR011701 Major facilitator superfamily YPA_RS04600 IPR020846 Major facilitator superfamily domain YPA_RS04605 IPR007263 Protein of unknown function DUF393 YPA_RS04610 IPR002347 Glucose/ribitol dehydrogenase YPA_RS04610 IPR016040 NAD(P)-binding domain YPA_RS04610 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPA_RS04615 IPR011234 Fumarylacetoacetase, C-terminal-related YPA_RS04620 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase YPA_RS04620 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain YPA_RS04620 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal YPA_RS04620 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site YPA_RS04620 IPR029017 Enolase N-terminal domain-like YPA_RS04620 IPR029065 Enolase C-terminal domain-like YPA_RS04625 IPR000262 FMN-dependent dehydrogenase YPA_RS04625 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site YPA_RS04625 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent YPA_RS04625 IPR013785 Aldolase-type TIM barrel YPA_RS04625 IPR020920 L-lactate dehydrogenase, bacterial YPA_RS04635 IPR002528 Multi antimicrobial extrusion protein YPA_RS04640 IPR005829 Sugar transporter, conserved site YPA_RS04640 IPR011701 Major facilitator superfamily YPA_RS04640 IPR020846 Major facilitator superfamily domain YPA_RS04645 IPR002509 Polysaccharide deacetylase YPA_RS04645 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YPA_RS04655 IPR018636 Protein of unknown function DUF2058 YPA_RS04665 IPR000792 Transcription regulator LuxR, C-terminal YPA_RS04665 IPR001789 Signal transduction response regulator, receiver domain YPA_RS04665 IPR011006 CheY-like superfamily YPA_RS04665 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS04665 IPR016032 Signal transduction response regulator, C-terminal effector YPA_RS04670 IPR004681 TRAP transporter permease protein YPA_RS04670 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit YPA_RS04675 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component YPA_RS04680 IPR004682 TRAP dicarboxylate transporter YPA_RS04680 IPR018389 Bacterial extracellular solute-binding protein, family 7 YPA_RS04685 IPR003542 Enterobactin synthetase-like, component D YPA_RS04685 IPR008278 4'-phosphopantetheinyl transferase superfamily YPA_RS04695 IPR000111 Glycoside hydrolase, clan GH-D YPA_RS04695 IPR002252 Glycoside hydrolase, family 36 YPA_RS04695 IPR013785 Aldolase-type TIM barrel YPA_RS04695 IPR017853 Glycoside hydrolase, superfamily YPA_RS04695 IPR031704 YPA_RS04695 YPA_RS04700 IPR000576 LacY/RafB permease family YPA_RS04700 IPR020846 Major facilitator superfamily domain YPA_RS04705 IPR001207 Transposase, mutator type YPA_RS04710 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal YPA_RS04715 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site YPA_RS04715 IPR001650 Helicase, C-terminal YPA_RS04715 IPR011545 DEAD/DEAH box helicase domain YPA_RS04715 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS04725 IPR002686 Transposase IS200-like YPA_RS04730 IPR025164 Domain of unknown function DUF4097 YPA_RS04735 IPR001269 tRNA-dihydrouridine synthase YPA_RS04735 IPR013785 Aldolase-type TIM barrel YPA_RS04735 IPR018517 tRNA-dihydrouridine synthase, conserved site YPA_RS04735 IPR032886 YPA_RS04735 YPA_RS04745 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal YPA_RS04745 IPR012338 Beta-lactamase/transpeptidase-like YPA_RS04745 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A YPA_RS04750 IPR006094 FAD linked oxidase, N-terminal YPA_RS04750 IPR012256 D-lactate dehydrogenase YPA_RS04750 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal YPA_RS04750 IPR016164 FAD-linked oxidase-like, C-terminal YPA_RS04750 IPR016166 FAD-binding, type 2 YPA_RS04750 IPR016167 FAD-binding, type 2, subdomain 1 YPA_RS04750 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 YPA_RS04750 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 YPA_RS04750 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 YPA_RS04755 IPR008173 Adenylyl cyclase CyaB YPA_RS04755 IPR023577 CYTH-like domain YPA_RS04755 IPR033469 YPA_RS04755 YPA_RS04760 IPR002711 HNH endonuclease YPA_RS04760 IPR003615 HNH nuclease YPA_RS04765 IPR020941 Suppressor of fused-like domain YPA_RS04770 IPR007341 Transglycosylase-associated protein YPA_RS04775 IPR003439 ABC transporter-like YPA_RS04775 IPR003593 AAA+ ATPase domain YPA_RS04775 IPR012693 ABC transporter, phosphonate import, PhnC YPA_RS04775 IPR017871 ABC transporter, conserved site YPA_RS04775 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS04780 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic protein YPA_RS04780 IPR017797 Phosphonate ABC transporter, periplasmic substrate-binding protein YPA_RS04785 IPR000515 MetI-like domain YPA_RS04785 IPR005769 ABC transporter, permease PhnE/PtxC YPA_RS04790 IPR000515 MetI-like domain YPA_RS04790 IPR005769 ABC transporter, permease PhnE/PtxC YPA_RS04795 IPR009921 Domain of unknown function DUF1456 YPA_RS04800 IPR000709 Leu/Ile/Val-binding protein YPA_RS04800 IPR017777 ABC transporter, urea, substrate-binding, UrtA YPA_RS04800 IPR028082 Periplasmic binding protein-like I YPA_RS04805 IPR001851 ABC transporter, permease YPA_RS04805 IPR011989 Armadillo-like helical YPA_RS04805 IPR016024 Armadillo-type fold YPA_RS04805 IPR017779 ABC transporter, urea, permease protein, UrtB YPA_RS04810 IPR001851 ABC transporter, permease YPA_RS04810 IPR017778 ABC transporter, urea, permease protein, UrtC YPA_RS04815 IPR003439 ABC transporter-like YPA_RS04815 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD YPA_RS04815 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS04815 IPR032823 YPA_RS04815 YPA_RS04820 IPR003439 ABC transporter-like YPA_RS04820 IPR003593 AAA+ ATPase domain YPA_RS04820 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE YPA_RS04820 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS04825 IPR005123 Oxoglutarate/iron-dependent dioxygenase YPA_RS04825 IPR016946 Uncharacterised conserved protein UCP030125 YPA_RS04830 IPR002129 Pyridoxal phosphate-dependent decarboxylase YPA_RS04830 IPR010977 Aromatic-L-amino-acid decarboxylase YPA_RS04830 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPA_RS04830 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPA_RS04830 IPR015424 Pyridoxal phosphate-dependent transferase YPA_RS04835 IPR001307 Thiosulphate sulfurtransferase, conserved site YPA_RS04835 IPR001763 Rhodanese-like domain YPA_RS04840 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain YPA_RS04845 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain YPA_RS04850 IPR000515 MetI-like domain YPA_RS04850 IPR001991 Sodium:dicarboxylate symporter YPA_RS04855 IPR003439 ABC transporter-like YPA_RS04855 IPR003593 AAA+ ATPase domain YPA_RS04855 IPR017871 ABC transporter, conserved site YPA_RS04855 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS04860 IPR000515 MetI-like domain YPA_RS04865 IPR002293 Amino acid/polyamine transporter I YPA_RS04870 IPR000310 Orn/Lys/Arg decarboxylase, major domain YPA_RS04870 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal YPA_RS04870 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal YPA_RS04870 IPR011193 Ornithine/lysine/arginine decarboxylase YPA_RS04870 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPA_RS04870 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPA_RS04870 IPR015424 Pyridoxal phosphate-dependent transferase YPA_RS04880 IPR000620 Drug/metabolite transporter YPA_RS04885 IPR001584 Integrase, catalytic core YPA_RS04885 IPR006120 Resolvase, HTH domain YPA_RS04885 IPR009057 Homeodomain-like YPA_RS04885 IPR012337 Ribonuclease H-like domain YPA_RS04890 IPR001270 ClpA/B family YPA_RS04890 IPR002611 IstB-like ATP-binding protein YPA_RS04890 IPR003593 AAA+ ATPase domain YPA_RS04890 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS04890 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS04895 IPR001702 Porin, Gram-negative type YPA_RS04895 IPR001897 Porin, gammaproteobacterial YPA_RS04895 IPR013793 Porin, Gram-negative type, conserved site YPA_RS04895 IPR023614 Porin domain YPA_RS04900 IPR006554 Helicase-like, DEXD box c2 type YPA_RS04900 IPR006555 ATP-dependent helicase, C-terminal YPA_RS04900 IPR010614 DEAD2 YPA_RS04900 IPR011545 DEAD/DEAH box helicase domain YPA_RS04900 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YPA_RS04900 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS04905 IPR010582 Catalase immune-responsive domain YPA_RS04905 IPR011614 Catalase core domain YPA_RS04905 IPR018028 Catalase, mono-functional, haem-containing YPA_RS04905 IPR020835 Catalase-like domain YPA_RS04905 IPR024708 Catalase active site YPA_RS04905 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 YPA_RS04910 IPR009998 YfaZ YPA_RS04910 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel YPA_RS04910 IPR023614 Porin domain YPA_RS04915 IPR002091 Aromatic amino acid permease YPA_RS04915 IPR013059 Tryptophan/tyrosine transporter YPA_RS04915 IPR013061 Tryptophan/tryrosine permease, conserved site YPA_RS04915 IPR018227 Tryptophan/tyrosine permease YPA_RS04920 IPR001453 Molybdopterin binding domain YPA_RS04920 IPR008135 Competence-induced protein CinA YPA_RS04925 IPR005658 Proteinase inhibitor I11, ecotin YPA_RS04925 IPR023084 Proteinase inhibitor I11, ecotin, gammaproteobacteria YPA_RS04925 IPR023189 Proteinase inhibitor I11, ecotin domain YPA_RS04925 IPR027438 Ecotin, C-terminal YPA_RS04930 IPR001041 2Fe-2S ferredoxin-type domain YPA_RS04930 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site YPA_RS04930 IPR012675 Beta-grasp domain YPA_RS04935 IPR000358 Ribonucleotide reductase small subunit YPA_RS04935 IPR009078 Ferritin-like superfamily YPA_RS04935 IPR012348 Ribonucleotide reductase-related YPA_RS04935 IPR030475 YPA_RS04935 YPA_RS04940 IPR000788 Ribonucleotide reductase large subunit, C-terminal YPA_RS04940 IPR005144 ATP-cone YPA_RS04940 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal YPA_RS04940 IPR013346 Ribonucleotide reductase, class I , alpha subunit YPA_RS04940 IPR013509 Ribonucleotide reductase large subunit, N-terminal YPA_RS04945 IPR010233 Ubiquinone biosynthesis O-methyltransferase YPA_RS04945 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPA_RS04950 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal YPA_RS04950 IPR005743 DNA gyrase, subunit A YPA_RS04950 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel YPA_RS04950 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain YPA_RS04950 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta YPA_RS04950 IPR013760 DNA topoisomerase, type IIA-like domain YPA_RS04950 IPR024946 Arginine repressor C-terminal-like domain YPA_RS04960 IPR001789 Signal transduction response regulator, receiver domain YPA_RS04960 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPA_RS04960 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPA_RS04960 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPA_RS04960 IPR011006 CheY-like superfamily YPA_RS04960 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal YPA_RS04960 IPR030856 YPA_RS04960 YPA_RS04965 IPR000792 Transcription regulator LuxR, C-terminal YPA_RS04965 IPR001789 Signal transduction response regulator, receiver domain YPA_RS04965 IPR011006 CheY-like superfamily YPA_RS04965 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS04965 IPR016032 Signal transduction response regulator, C-terminal effector YPA_RS04965 IPR030864 YPA_RS04965 YPA_RS04970 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain YPA_RS04970 IPR032306 YPA_RS04970 YPA_RS04975 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPA_RS04980 IPR011701 Major facilitator superfamily YPA_RS04980 IPR020846 Major facilitator superfamily domain YPA_RS04990 IPR001702 Porin, Gram-negative type YPA_RS04990 IPR001897 Porin, gammaproteobacterial YPA_RS04990 IPR013793 Porin, Gram-negative type, conserved site YPA_RS04990 IPR023614 Porin domain YPA_RS05010 IPR001466 Beta-lactamase-related YPA_RS05010 IPR012338 Beta-lactamase/transpeptidase-like YPA_RS05020 IPR020846 Major facilitator superfamily domain YPA_RS05025 IPR001279 Beta-lactamase-like YPA_RS05025 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D YPA_RS05030 IPR003660 HAMP linker domain YPA_RS05030 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YPA_RS05030 IPR029151 Periplasmic sensor domain-like YPA_RS05030 IPR033479 YPA_RS05030 YPA_RS05035 IPR000036 Peptidase A26, omptin YPA_RS05035 IPR020080 Outer membrane adhesin/peptidase omptin YPA_RS05035 IPR023619 Peptidase A26 YPA_RS05040 IPR010391 DNA damage-inducible protein DinI-like YPA_RS05045 IPR001387 Cro/C1-type helix-turn-helix domain YPA_RS05045 IPR010982 Lambda repressor-like, DNA-binding domain YPA_RS05045 IPR015927 Peptidase S24/S26A/S26B/S26C YPA_RS05045 IPR019759 Peptidase S24/S26A/S26B YPA_RS05045 IPR028360 Peptidase S24/S26, beta-ribbon domain YPA_RS05050 IPR010534 Bacteriophage 933W, GpQ YPA_RS05055 IPR010737 Protein of unknown function, DUF1537 YPA_RS05055 IPR031475 YPA_RS05055 YPA_RS05065 IPR001034 HTH DeoR N-terminal domain YPA_RS05065 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS05065 IPR014036 DeoR C-terminal sensor domain YPA_RS05065 IPR018356 Transcription regulator, HTH DeoR-type, conserved site YPA_RS05070 IPR013022 Xylose isomerase-like, TIM barrel domain YPA_RS05070 IPR026040 Hydroxypyruvate isomerase-like YPA_RS05085 IPR024400 Protein of unknown function DUF2635 YPA_RS05090 IPR007067 Tail sheath protein YPA_RS05095 IPR019596 Bacteriophage Mu, GpM, tail tube YPA_RS05100 IPR019289 Bacteriophage tail protein Gp41, putative YPA_RS05110 IPR009826 DNA circulation, N-terminal YPA_RS05115 IPR026276 Baseplate protein GpP YPA_RS05120 IPR014462 Bacteriophage Mu, Gp45 YPA_RS05125 IPR010877 Bacteriophage Mu, Gp46 YPA_RS05130 IPR006949 Baseplate assembly protein J-like, predicted YPA_RS05135 IPR018755 Bacteriophage Mu, Gp48 YPA_RS05140 IPR018755 Bacteriophage Mu, Gp48 YPA_RS05145 IPR011083 Phage tail collar domain YPA_RS05150 IPR000281 Helix-turn-helix protein RpiR YPA_RS05150 IPR001347 Sugar isomerase (SIS) YPA_RS05150 IPR009057 Homeodomain-like YPA_RS05150 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS05155 IPR001360 Glycoside hydrolase, family 1 YPA_RS05155 IPR013781 Glycoside hydrolase, catalytic domain YPA_RS05155 IPR017853 Glycoside hydrolase, superfamily YPA_RS05155 IPR018120 Glycoside hydrolase, family 1, active site YPA_RS05155 IPR033132 YPA_RS05155 YPA_RS05175 IPR024622 Colicin/pyocin, DNase domain YPA_RS05180 IPR001584 Integrase, catalytic core YPA_RS05180 IPR006120 Resolvase, HTH domain YPA_RS05180 IPR009057 Homeodomain-like YPA_RS05180 IPR012337 Ribonuclease H-like domain YPA_RS05185 IPR001270 ClpA/B family YPA_RS05185 IPR002611 IstB-like ATP-binding protein YPA_RS05185 IPR003593 AAA+ ATPase domain YPA_RS05185 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS05185 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS05200 IPR000917 Sulfatase YPA_RS05200 IPR012159 Membrane sulfatase, HI0842-related YPA_RS05200 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha YPA_RS05200 IPR017850 Alkaline-phosphatase-like, core domain YPA_RS05200 IPR024588 Membrane sulfatase, HI0842-related, N-terminal domain YPA_RS05205 IPR009857 Uncharacterised protein family UPF0352 YPA_RS05205 IPR023202 YejL-like domain YPA_RS05210 IPR007358 Nucleoid-associated protein NdpA YPA_RS05220 IPR002686 Transposase IS200-like YPA_RS05225 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain YPA_RS05225 IPR020055 Ribosomal protein L25, short-form YPA_RS05225 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain YPA_RS05225 IPR029751 Ribosomal protein L25 YPA_RS05230 IPR001650 Helicase, C-terminal YPA_RS05230 IPR006935 Helicase/UvrB domain YPA_RS05230 IPR011332 Zinc-binding ribosomal protein YPA_RS05230 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YPA_RS05230 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS05235 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F YPA_RS05235 IPR002942 RNA-binding S4 domain YPA_RS05235 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F YPA_RS05235 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site YPA_RS05235 IPR020103 Pseudouridine synthase, catalytic domain YPA_RS05240 IPR004812 Drug resistance transporter Bcr/CmlA subfamily YPA_RS05240 IPR011701 Major facilitator superfamily YPA_RS05240 IPR020846 Major facilitator superfamily domain YPA_RS05245 IPR020489 Uncharacterised protein family YejG YPA_RS05250 IPR003439 ABC transporter-like YPA_RS05250 IPR003593 AAA+ ATPase domain YPA_RS05250 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YPA_RS05250 IPR017871 ABC transporter, conserved site YPA_RS05250 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS05255 IPR000515 MetI-like domain YPA_RS05255 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YPA_RS05260 IPR000515 MetI-like domain YPA_RS05265 IPR000914 Bacterial extracellular solute-binding protein, family 5 YPA_RS05265 IPR030678 YPA_RS05265 YPA_RS05270 IPR001633 EAL domain YPA_RS05270 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain YPA_RS05275 IPR000064 Endopeptidase, NLPC/P60 domain YPA_RS05280 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPA_RS05280 IPR032908 YPA_RS05280 YPA_RS05285 IPR003495 CobW/HypB/UreG domain YPA_RS05285 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal YPA_RS05285 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS05295 IPR000524 Transcription regulator HTH, GntR YPA_RS05295 IPR008920 Transcription regulator FadR/GntR, C-terminal YPA_RS05295 IPR011711 GntR, C-terminal YPA_RS05295 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS05300 IPR000669 Mannitol dehydrogenase YPA_RS05300 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YPA_RS05300 IPR013118 Mannitol dehydrogenase, C-terminal YPA_RS05300 IPR013131 Mannitol dehydrogenase, N-terminal YPA_RS05300 IPR013328 Dehydrogenase, multihelical YPA_RS05300 IPR016040 NAD(P)-binding domain YPA_RS05300 IPR023027 Mannitol dehydrogenase, conserved site YPA_RS05305 IPR004628 Mannonate dehydratase YPA_RS05305 IPR013022 Xylose isomerase-like, TIM barrel domain YPA_RS05310 IPR001059 Translation elongation factor P/YeiP, central YPA_RS05310 IPR008991 Translation protein SH3-like domain YPA_RS05310 IPR011897 Translation elongation factor P-like, YeiP YPA_RS05310 IPR012340 Nucleic acid-binding, OB-fold YPA_RS05310 IPR013185 Translation elongation factor, KOW-like YPA_RS05310 IPR013852 Translation elongation factor P/YeiP, conserved site YPA_RS05310 IPR014722 Ribosomal protein L2 domain 2 YPA_RS05310 IPR015365 Elongation factor P, C-terminal YPA_RS05310 IPR020599 Translation elongation factor P/YeiP YPA_RS05315 IPR002091 Aromatic amino acid permease YPA_RS05315 IPR013059 Tryptophan/tyrosine transporter YPA_RS05315 IPR018227 Tryptophan/tyrosine permease YPA_RS05320 IPR005358 Putative zinc- or iron-chelating domain containing protein YPA_RS05325 IPR002347 Glucose/ribitol dehydrogenase YPA_RS05325 IPR016040 NAD(P)-binding domain YPA_RS05325 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPA_RS05330 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPA_RS05330 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain YPA_RS05330 IPR016040 NAD(P)-binding domain YPA_RS05330 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YPA_RS05335 IPR011234 Fumarylacetoacetase, C-terminal-related YPA_RS05340 IPR001584 Integrase, catalytic core YPA_RS05340 IPR012337 Ribonuclease H-like domain YPA_RS05340 IPR025948 HTH-like domain YPA_RS05345 IPR009057 Homeodomain-like YPA_RS05345 IPR010921 Trp repressor/replication initiator YPA_RS05345 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS05350 IPR015590 Aldehyde dehydrogenase domain YPA_RS05350 IPR016160 Aldehyde dehydrogenase, cysteine active site YPA_RS05350 IPR016161 Aldehyde/histidinol dehydrogenase YPA_RS05350 IPR016162 Aldehyde dehydrogenase, N-terminal YPA_RS05350 IPR016163 Aldehyde dehydrogenase, C-terminal YPA_RS05355 IPR000577 YPA_RS05355 YPA_RS05355 IPR006000 Xylulokinase YPA_RS05355 IPR018483 Carbohydrate kinase, FGGY, conserved site YPA_RS05355 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPA_RS05355 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPA_RS05360 IPR004788 Ribose 5-phosphate isomerase, type A YPA_RS05360 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup YPA_RS05365 IPR025997 Periplasmic binding protein domain YPA_RS05365 IPR028082 Periplasmic binding protein-like I YPA_RS05370 IPR003439 ABC transporter-like YPA_RS05370 IPR003593 AAA+ ATPase domain YPA_RS05370 IPR017871 ABC transporter, conserved site YPA_RS05370 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS05375 IPR001851 ABC transporter, permease YPA_RS05380 IPR000086 NUDIX hydrolase domain YPA_RS05380 IPR015797 NUDIX hydrolase domain-like YPA_RS05380 IPR020084 NUDIX hydrolase, conserved site YPA_RS05380 IPR020476 NUDIX hydrolase YPA_RS05385 IPR000032 Phosphocarrier HPr protein-like YPA_RS05385 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site YPA_RS05385 IPR002114 Phosphotransferase system, HPr serine phosphorylation site YPA_RS05385 IPR002178 PTS EIIA type-2 domain YPA_RS05385 IPR016152 Phosphotransferase/anion transporter YPA_RS05390 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YPA_RS05390 IPR011611 Carbohydrate kinase PfkB YPA_RS05390 IPR017583 Tagatose/fructose phosphokinase YPA_RS05390 IPR022463 Fructose 1-phosphate kinase YPA_RS05390 IPR029056 Ribokinase-like YPA_RS05395 IPR003352 Phosphotransferase system, EIIC YPA_RS05395 IPR003353 Phosphotransferase system, fructose-specific IIB subunit YPA_RS05395 IPR003501 Phosphotransferase system, EIIB component, type 2/3 YPA_RS05395 IPR006327 Phosphotransferase system, fructose IIC component YPA_RS05400 IPR001867 Signal transduction response regulator, C-terminal YPA_RS05400 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS05400 IPR016032 Signal transduction response regulator, C-terminal effector YPA_RS05415 IPR001829 Pili assembly chaperone, bacterial YPA_RS05415 IPR008962 PapD-like YPA_RS05415 IPR016147 PapD, N-terminal, bacterial YPA_RS05415 IPR016148 Pili assembly chaperone, C-terminal domain YPA_RS05415 IPR018046 Pili assembly chaperone, conserved site YPA_RS05420 IPR000015 Outer membrane usher protein YPA_RS05420 IPR018030 Fimbrial membrane usher, conserved site YPA_RS05420 IPR025885 PapC, N-terminal domain YPA_RS05420 IPR025949 PapC-like, C-terminal domain YPA_RS05425 IPR001719 AP endonuclease 2 YPA_RS05425 IPR013022 Xylose isomerase-like, TIM barrel domain YPA_RS05425 IPR018246 AP endonuclease 2, zinc binding site YPA_RS05430 IPR004630 Uncharacterised protein family UPF0324, bacteria YPA_RS05430 IPR018383 Uncharacterised protein family UPF0324, prokaryote YPA_RS05435 IPR000847 Transcription regulator HTH, LysR YPA_RS05435 IPR005119 LysR, substrate-binding YPA_RS05435 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS05440 IPR002293 Amino acid/polyamine transporter I YPA_RS05440 IPR004840 Amino acid permease, conserved site YPA_RS05440 IPR004841 Amino acid permease/ SLC12A domain YPA_RS05445 IPR002491 ABC transporter periplasmic binding domain YPA_RS05450 IPR000522 ABC transporter, permease protein YPA_RS05450 IPR029022 ABC transporter, BtuC-like YPA_RS05455 IPR003439 ABC transporter-like YPA_RS05455 IPR003593 AAA+ ATPase domain YPA_RS05455 IPR017871 ABC transporter, conserved site YPA_RS05455 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS05460 IPR000531 TonB-dependent receptor, beta-barrel YPA_RS05460 IPR010916 TonB box, conserved site YPA_RS05460 IPR012910 TonB-dependent receptor, plug YPA_RS05465 IPR004045 Glutathione S-transferase, N-terminal YPA_RS05465 IPR004046 Glutathione S-transferase, C-terminal YPA_RS05465 IPR010987 Glutathione S-transferase, C-terminal-like YPA_RS05465 IPR012336 Thioredoxin-like fold YPA_RS05470 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like YPA_RS05470 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial YPA_RS05470 IPR023214 HAD-like domain YPA_RS05475 IPR002283 Isopenicillin N synthase YPA_RS05475 IPR005123 Oxoglutarate/iron-dependent dioxygenase YPA_RS05475 IPR026992 Non-haem dioxygenase N-terminal domain YPA_RS05475 IPR027443 Isopenicillin N synthase-like YPA_RS05480 IPR004872 Lipoprotein NlpA family YPA_RS05485 IPR003439 ABC transporter-like YPA_RS05485 IPR003593 AAA+ ATPase domain YPA_RS05485 IPR017871 ABC transporter, conserved site YPA_RS05485 IPR018449 NIL domain YPA_RS05485 IPR026253 Methionine import ATP-binding protein MetN YPA_RS05485 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS05490 IPR000515 MetI-like domain YPA_RS05495 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal YPA_RS05495 IPR012338 Beta-lactamase/transpeptidase-like YPA_RS05495 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A YPA_RS05500 IPR001270 ClpA/B family YPA_RS05500 IPR002611 IstB-like ATP-binding protein YPA_RS05500 IPR003593 AAA+ ATPase domain YPA_RS05500 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS05500 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS05505 IPR001584 Integrase, catalytic core YPA_RS05505 IPR006120 Resolvase, HTH domain YPA_RS05505 IPR009057 Homeodomain-like YPA_RS05505 IPR012337 Ribonuclease H-like domain YPA_RS05510 IPR006219 DHAP synthase, class 1 YPA_RS05510 IPR013785 Aldolase-type TIM barrel YPA_RS05515 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site YPA_RS05515 IPR005952 Phosphoglycerate mutase 1 YPA_RS05515 IPR013078 Histidine phosphatase superfamily, clade-1 YPA_RS05515 IPR029033 Histidine phosphatase superfamily YPA_RS05520 IPR011690 Phosphate-starvation-induced PsiF repeat YPA_RS05525 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase YPA_RS05525 IPR011013 Galactose mutarotase-like domain YPA_RS05525 IPR013458 Aldose 1-epimerase, bacterial YPA_RS05525 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup YPA_RS05525 IPR015443 Aldose 1-epimerase YPA_RS05525 IPR018052 Aldose 1-epimerase, conserved site YPA_RS05535 IPR000705 Galactokinase YPA_RS05535 IPR006203 GHMP kinase, ATP-binding, conserved site YPA_RS05535 IPR006204 GHMP kinase N-terminal domain YPA_RS05535 IPR006206 Mevalonate/galactokinase YPA_RS05535 IPR013750 GHMP kinase, C-terminal domain YPA_RS05535 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPA_RS05535 IPR019539 Galactokinase galactose-binding domain YPA_RS05535 IPR019741 Galactokinase, conserved site YPA_RS05535 IPR020568 Ribosomal protein S5 domain 2-type fold YPA_RS05535 IPR022963 Galactokinase, bacterial YPA_RS05540 IPR001937 Galactose-1-phosphate uridyl transferase, class I YPA_RS05540 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal YPA_RS05540 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal YPA_RS05540 IPR011146 HIT-like domain YPA_RS05540 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site YPA_RS05545 IPR005886 UDP-glucose 4-epimerase GalE YPA_RS05545 IPR016040 NAD(P)-binding domain YPA_RS05550 IPR003675 CAAX amino terminal protease YPA_RS05560 IPR003439 ABC transporter-like YPA_RS05560 IPR003593 AAA+ ATPase domain YPA_RS05560 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS05565 IPR000847 Transcription regulator HTH, LysR YPA_RS05565 IPR003725 Molybdenum-binding protein, N-terminal YPA_RS05565 IPR004606 Molybdenum-pterin binding YPA_RS05565 IPR005116 Transport-associated OB, type 1 YPA_RS05565 IPR008995 Molybdate/tungstate binding, C-terminal YPA_RS05565 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS05565 IPR016462 Molybdate-dependent transcriptional regulator, ModE YPA_RS05570 IPR019702 Protein of unknown function DUF2592 YPA_RS05575 IPR005950 Molybdenum ABC transporter, periplasmic binding protein YPA_RS05580 IPR000515 MetI-like domain YPA_RS05580 IPR011867 Molybdate ABC transporter, permease protein YPA_RS05585 IPR003439 ABC transporter-like YPA_RS05585 IPR003593 AAA+ ATPase domain YPA_RS05585 IPR004606 Molybdenum-pterin binding YPA_RS05585 IPR005116 Transport-associated OB, type 1 YPA_RS05585 IPR008995 Molybdate/tungstate binding, C-terminal YPA_RS05585 IPR011868 Molybdate ABC transporter, ATP-binding protein YPA_RS05585 IPR017871 ABC transporter, conserved site YPA_RS05585 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS05590 IPR000150 Cof protein YPA_RS05590 IPR006379 HAD-superfamily hydrolase, subfamily IIB YPA_RS05590 IPR023214 HAD-like domain YPA_RS05595 IPR011045 Nitrous oxide reductase, N-terminal YPA_RS05595 IPR015943 WD40/YVTN repeat-like-containing domain YPA_RS05595 IPR019405 Lactonase, 7-bladed beta propeller YPA_RS05595 IPR022528 6-phosphogluconolactonase, YbhE-type YPA_RS05600 IPR005814 Aminotransferase class-III YPA_RS05600 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA YPA_RS05600 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPA_RS05600 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPA_RS05600 IPR015424 Pyridoxal phosphate-dependent transferase YPA_RS05605 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB YPA_RS05605 IPR006638 Elongator protein 3/MiaB/NifB YPA_RS05605 IPR007197 Radical SAM YPA_RS05605 IPR010722 Biotin and thiamin synthesis-associated domain YPA_RS05605 IPR013785 Aldolase-type TIM barrel YPA_RS05605 IPR024177 Biotin synthase YPA_RS05610 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site YPA_RS05610 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type YPA_RS05610 IPR004839 Aminotransferase, class I/classII YPA_RS05610 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPA_RS05610 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPA_RS05610 IPR015424 Pyridoxal phosphate-dependent transferase YPA_RS05610 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria YPA_RS05615 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC YPA_RS05615 IPR013216 Methyltransferase type 11 YPA_RS05615 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPA_RS05620 IPR004472 Dethiobiotin synthase BioD YPA_RS05620 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS05625 IPR003439 ABC transporter-like YPA_RS05625 IPR003593 AAA+ ATPase domain YPA_RS05625 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS05630 IPR001650 Helicase, C-terminal YPA_RS05630 IPR001943 UVR domain YPA_RS05630 IPR004807 UvrABC system, subunit B YPA_RS05630 IPR006935 Helicase/UvrB domain YPA_RS05630 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YPA_RS05630 IPR024759 UvrB, YAD/RRR-motif-containing domain YPA_RS05630 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS05635 IPR003034 SAP domain YPA_RS05635 IPR018668 Protein of unknown function DUF2132 YPA_RS05640 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 YPA_RS05640 IPR010119 Gluconeogenesis factor YPA_RS05650 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site YPA_RS05650 IPR006638 Elongator protein 3/MiaB/NifB YPA_RS05650 IPR007197 Radical SAM YPA_RS05650 IPR010505 Molybdenum cofactor synthesis C-terminal YPA_RS05650 IPR013483 Molybdenum cofactor biosynthesis protein A YPA_RS05650 IPR013785 Aldolase-type TIM barrel YPA_RS05655 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain YPA_RS05655 IPR023045 Molybdenum cofactor biosynthesis C YPA_RS05655 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type YPA_RS05660 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 YPA_RS05660 IPR010034 Molybdopterin converting factor, subunit 1 YPA_RS05660 IPR012675 Beta-grasp domain YPA_RS05660 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp YPA_RS05665 IPR003448 Molybdopterin biosynthesis MoaE YPA_RS05680 IPR002686 Transposase IS200-like YPA_RS05685 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal YPA_RS05685 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal YPA_RS05685 IPR011533 Oxygen-dependent choline dehydrogenase YPA_RS05685 IPR012132 Glucose-methanol-choline oxidoreductase YPA_RS05685 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPA_RS05690 IPR011264 NAD/NADP-dependent betaine aldehyde dehydrogenase YPA_RS05690 IPR015590 Aldehyde dehydrogenase domain YPA_RS05690 IPR016160 Aldehyde dehydrogenase, cysteine active site YPA_RS05690 IPR016161 Aldehyde/histidinol dehydrogenase YPA_RS05690 IPR016162 Aldehyde dehydrogenase, N-terminal YPA_RS05690 IPR016163 Aldehyde dehydrogenase, C-terminal YPA_RS05690 IPR029510 Aldehyde dehydrogenase, glutamic acid active site YPA_RS05695 IPR001647 DNA-binding HTH domain, TetR-type YPA_RS05695 IPR009057 Homeodomain-like YPA_RS05695 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal YPA_RS05695 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal YPA_RS05695 IPR017757 Transcriptional repressor BetI YPA_RS05695 IPR023772 DNA-binding HTH domain, TetR-type, conserved site YPA_RS05700 IPR000060 BCCT transporter family YPA_RS05700 IPR018093 BCCT transporter, conserved site YPA_RS05705 IPR000847 Transcription regulator HTH, LysR YPA_RS05705 IPR005119 LysR, substrate-binding YPA_RS05705 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS05710 IPR000620 Drug/metabolite transporter YPA_RS05715 IPR000845 Nucleoside phosphorylase domain YPA_RS05715 IPR001369 PNP/MTAP phosphorylase YPA_RS05715 IPR010943 Xanthosine phosphorylase YPA_RS05715 IPR011268 Purine nucleoside phosphorylase YPA_RS05715 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific YPA_RS05720 IPR020846 Major facilitator superfamily domain YPA_RS05725 IPR002686 Transposase IS200-like YPA_RS05730 IPR020846 Major facilitator superfamily domain YPA_RS05735 IPR020365 Zinc resistance-associated protein, ZraP YPA_RS05735 IPR025961 Heavy-metal resistance protein YPA_RS05740 IPR000014 PAS domain YPA_RS05740 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPA_RS05740 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPA_RS05740 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPA_RS05740 IPR013767 PAS fold YPA_RS05740 IPR029151 Periplasmic sensor domain-like YPA_RS05740 IPR033463 YPA_RS05740 YPA_RS05745 IPR001789 Signal transduction response regulator, receiver domain YPA_RS05745 IPR002078 RNA polymerase sigma factor 54 interaction domain YPA_RS05745 IPR002197 DNA binding HTH domain, Fis-type YPA_RS05745 IPR003593 AAA+ ATPase domain YPA_RS05745 IPR009057 Homeodomain-like YPA_RS05745 IPR011006 CheY-like superfamily YPA_RS05745 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YPA_RS05745 IPR025944 Sigma-54 interaction domain, conserved site YPA_RS05745 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS05750 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal YPA_RS05750 IPR013785 Aldolase-type TIM barrel YPA_RS05755 IPR000847 Transcription regulator HTH, LysR YPA_RS05755 IPR005119 LysR, substrate-binding YPA_RS05755 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS05765 IPR009799 EthD domain YPA_RS05765 IPR011008 Dimeric alpha-beta barrel YPA_RS05770 IPR000412 ABC-2 transporter YPA_RS05780 IPR003439 ABC transporter-like YPA_RS05780 IPR003593 AAA+ ATPase domain YPA_RS05780 IPR017871 ABC transporter, conserved site YPA_RS05780 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS05785 IPR022936 Uncharacterised protein family UPF0194, membrane protein YbhG YPA_RS05785 IPR032317 YPA_RS05785 YPA_RS05790 IPR001647 DNA-binding HTH domain, TetR-type YPA_RS05790 IPR009057 Homeodomain-like YPA_RS05790 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal YPA_RS05790 IPR015292 Transcription regulator YbiH, C-terminal YPA_RS05790 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal YPA_RS05790 IPR023772 DNA-binding HTH domain, TetR-type, conserved site YPA_RS05795 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site YPA_RS05795 IPR001650 Helicase, C-terminal YPA_RS05795 IPR011545 DEAD/DEAH box helicase domain YPA_RS05795 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YPA_RS05795 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS05795 IPR028622 ATP-dependent RNA helicase RhlE YPA_RS05830 IPR001207 Transposase, mutator type YPA_RS05835 IPR000843 Transcription regulator HTH, LacI YPA_RS05835 IPR001761 Periplasmic binding protein/LacI sugar binding domain YPA_RS05835 IPR010982 Lambda repressor-like, DNA-binding domain YPA_RS05835 IPR028082 Periplasmic binding protein-like I YPA_RS05840 IPR001584 Integrase, catalytic core YPA_RS05840 IPR006120 Resolvase, HTH domain YPA_RS05840 IPR009057 Homeodomain-like YPA_RS05840 IPR012337 Ribonuclease H-like domain YPA_RS05845 IPR001270 ClpA/B family YPA_RS05845 IPR002611 IstB-like ATP-binding protein YPA_RS05845 IPR003593 AAA+ ATPase domain YPA_RS05845 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS05845 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS05860 IPR010384 MtfA family YPA_RS05860 IPR024079 Metallopeptidase, catalytic domain YPA_RS05870 IPR005545 YCII-related YPA_RS05870 IPR011008 Dimeric alpha-beta barrel YPA_RS05875 IPR000687 RIO kinase YPA_RS05875 IPR011009 Protein kinase-like domain YPA_RS05875 IPR018935 RIO kinase, conserved site YPA_RS05880 IPR003439 ABC transporter-like YPA_RS05880 IPR003593 AAA+ ATPase domain YPA_RS05880 IPR011527 ABC transporter type 1, transmembrane domain YPA_RS05880 IPR017871 ABC transporter, conserved site YPA_RS05880 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS05890 IPR009057 Homeodomain-like YPA_RS05890 IPR018060 DNA binding HTH domain, AraC-type YPA_RS05890 IPR020449 Transcription regulator HTH, AraC- type YPA_RS05900 IPR020262 Uncharacterised protein family YecJ YPA_RS05905 IPR025611 YobH-like protein YPA_RS05910 IPR025594 YebO-like protein YPA_RS05915 IPR019701 Bacteriophage P22, NinX YPA_RS05920 IPR025135 Protein of unknown function DUF4060 YPA_RS05925 IPR002293 Amino acid/polyamine transporter I YPA_RS05925 IPR004840 Amino acid permease, conserved site YPA_RS05925 IPR004841 Amino acid permease/ SLC12A domain YPA_RS05930 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP YPA_RS05930 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel YPA_RS05940 IPR019672 Protein of unknown function DUF2627 YPA_RS05945 IPR002059 Cold-shock protein, DNA-binding YPA_RS05945 IPR011129 Cold shock protein YPA_RS05945 IPR012156 Cold shock, CspA YPA_RS05945 IPR012340 Nucleic acid-binding, OB-fold YPA_RS05945 IPR019844 Cold-shock conserved site YPA_RS05950 IPR003730 Multi-copper polyphenol oxidoreductase, laccase YPA_RS05950 IPR011324 Cytotoxic necrotizing factor-like, catalytic YPA_RS05955 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted YPA_RS05955 IPR025714 Methyltransferase domain YPA_RS05955 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPA_RS05965 IPR000014 PAS domain YPA_RS05965 IPR000160 GGDEF domain YPA_RS05965 IPR001610 PAC motif YPA_RS05965 IPR013767 PAS fold YPA_RS05965 IPR029787 Nucleotide cyclase YPA_RS05970 IPR000531 TonB-dependent receptor, beta-barrel YPA_RS05970 IPR010105 TonB-dependent siderophore receptor YPA_RS05970 IPR010917 TonB-dependent receptor, conserved site YPA_RS05970 IPR012910 TonB-dependent receptor, plug YPA_RS05970 IPR030149 YPA_RS05970 YPA_RS05975 IPR003810 Domain of unknown function DUF204 YPA_RS05975 IPR022929 Putative manganese efflux pump MntP YPA_RS05980 IPR009328 Protein of unknown function DUF986 YPA_RS05985 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component YPA_RS05985 IPR018405 Phosphotransferase system, mannose/fructose/sorbose family IID component, subgroup YPA_RS05990 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit YPA_RS05995 IPR004701 Phosphotransferase system, mannose-type IIA component YPA_RS05995 IPR004720 Phosphotransferase system, sorbose subfamily IIB component YPA_RS05995 IPR013789 Phosphotransferase system, mannose family IIA component YPA_RS05995 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup YPA_RS06000 IPR000644 CBS domain YPA_RS06000 IPR005170 Transporter-associated domain YPA_RS06000 IPR005496 Integral membrane protein TerC YPA_RS06000 IPR016166 FAD-binding, type 2 YPA_RS06000 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 YPA_RS06005 IPR000835 MarR-type HTH domain YPA_RS06005 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS06005 IPR012712 Homoprotocatechuate degradation transcriptional regulator HpaR YPA_RS06010 IPR011234 Fumarylacetoacetase, C-terminal-related YPA_RS06010 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit YPA_RS06015 IPR011234 Fumarylacetoacetase, C-terminal-related YPA_RS06015 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit YPA_RS06020 IPR015590 Aldehyde dehydrogenase domain YPA_RS06020 IPR016160 Aldehyde dehydrogenase, cysteine active site YPA_RS06020 IPR016161 Aldehyde/histidinol dehydrogenase YPA_RS06020 IPR016162 Aldehyde dehydrogenase, N-terminal YPA_RS06020 IPR016163 Aldehyde dehydrogenase, C-terminal YPA_RS06020 IPR029510 Aldehyde dehydrogenase, glutamic acid active site YPA_RS06025 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B YPA_RS06025 IPR011984 3,4-dihydroxyphenylacetate 2,3-dioxygenase HpaD-Fe YPA_RS06030 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase YPA_RS06030 IPR014347 Tautomerase/MIF superfamily YPA_RS06035 IPR011234 Fumarylacetoacetase, C-terminal-related YPA_RS06035 IPR012690 2-oxo-hepta-3-ene-1,7-dioic acid hydratase YPA_RS06040 IPR005000 HpcH/HpaI aldolase/citrate lyase domain YPA_RS06040 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase YPA_RS06040 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain YPA_RS06045 IPR011701 Major facilitator superfamily YPA_RS06045 IPR012707 4-hydroxyphenylacetate permease YPA_RS06045 IPR020846 Major facilitator superfamily domain YPA_RS06045 IPR024671 Autophagy-related protein 22-like YPA_RS06050 IPR004925 HpaB/PvcC/4-BUDH YPA_RS06050 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal YPA_RS06050 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain YPA_RS06050 IPR012688 4-HPA 3-monooxygenase large component, gammaproteobacteria YPA_RS06050 IPR024674 HpaB/PvcC/4-BUDH N-terminal YPA_RS06050 IPR024677 4-HPA 3-monooxygenase large component/Pyoverdin chromophore biosynthetic protein YPA_RS06050 IPR024719 HpaB/PvcC/4-BUDH C-terminal YPA_RS06060 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form YPA_RS06060 IPR005130 Serine dehydratase-like, alpha subunit YPA_RS06060 IPR005131 Serine dehydratase beta chain YPA_RS06060 IPR029009 Allosteric substrate binding domain YPA_RS06065 IPR000059 NUDIX hydrolase, NudL, conserved site YPA_RS06065 IPR000086 NUDIX hydrolase domain YPA_RS06065 IPR015797 NUDIX hydrolase domain-like YPA_RS06065 IPR023735 Uncharacterised nudix hydrolase NudL YPA_RS06070 IPR005801 ADC synthase YPA_RS06070 IPR005802 Para-aminobenzoate synthase, component I YPA_RS06070 IPR006805 Anthranilate synthase component I, N-terminal YPA_RS06070 IPR015890 Chorismate binding, C-terminal YPA_RS06070 IPR019999 Anthranilate synthase component I - like YPA_RS06075 IPR005371 Uncharacterised protein family UPF0181 YPA_RS06080 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type YPA_RS06080 IPR005862 Phosphoribosylglycinamide formyltransferase 2 YPA_RS06080 IPR011054 Rudiment single hybrid motif YPA_RS06080 IPR013815 ATP-grasp fold, subdomain 1 YPA_RS06080 IPR013816 ATP-grasp fold, subdomain 2 YPA_RS06080 IPR016185 Pre-ATP-grasp domain YPA_RS06085 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site YPA_RS06085 IPR001650 Helicase, C-terminal YPA_RS06085 IPR005580 DbpA, RNA-binding YPA_RS06085 IPR011545 DEAD/DEAH box helicase domain YPA_RS06085 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YPA_RS06085 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS06085 IPR028619 ATP-dependent RNA helicase DbpA YPA_RS06090 IPR009813 Uncharacterised protein family YebG YPA_RS06095 IPR007374 ASCH domain YPA_RS06095 IPR008314 Uncharacterised conserved protein UCP029143 YPA_RS06095 IPR015947 PUA-like domain YPA_RS06100 IPR020236 Uncharacterised protein family YebF YPA_RS06100 IPR025603 YebF/Colicin-M immunity protein YPA_RS06105 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain YPA_RS06105 IPR002470 Peptidase S9A, prolyl oligopeptidase YPA_RS06105 IPR023302 Peptidase S9A, N-terminal domain YPA_RS06105 IPR029058 Alpha/Beta hydrolase fold YPA_RS06110 IPR001584 Integrase, catalytic core YPA_RS06110 IPR006120 Resolvase, HTH domain YPA_RS06110 IPR009057 Homeodomain-like YPA_RS06110 IPR012337 Ribonuclease H-like domain YPA_RS06115 IPR001270 ClpA/B family YPA_RS06115 IPR002611 IstB-like ATP-binding protein YPA_RS06115 IPR003593 AAA+ ATPase domain YPA_RS06115 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS06115 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS06120 IPR000073 Alpha/beta hydrolase fold-1 YPA_RS06120 IPR002410 Peptidase S33 YPA_RS06120 IPR005944 Proline iminopeptidase YPA_RS06120 IPR029058 Alpha/Beta hydrolase fold YPA_RS06125 IPR009052 DNA polymerase III-theta, bacterial YPA_RS06125 IPR011325 DNA polymerase III-theta, core, bacterial YPA_RS06130 IPR001519 Ferritin YPA_RS06130 IPR008331 Ferritin/DPS protein domain YPA_RS06130 IPR009078 Ferritin-like superfamily YPA_RS06130 IPR012347 Ferritin-related YPA_RS06135 IPR007348 CopC domain YPA_RS06135 IPR014755 Copper resistance protein CopC/internalin, immunoglobulin-like YPA_RS06135 IPR014756 Immunoglobulin E-set YPA_RS06135 IPR032694 YPA_RS06135 YPA_RS06140 IPR008457 Copper resistance D YPA_RS06145 IPR019648 Protein of unknown function DUF2511 YPA_RS06155 IPR009081 Acyl carrier protein-like YPA_RS06155 IPR010862 Protein of unknown function DUF1493 YPA_RS06165 IPR006135 Type III secretion system substrate exporter YPA_RS06165 IPR006136 Type III exporter system, flagellar biosynthetic protein FlhB YPA_RS06165 IPR029025 Type III secretion system substrate exporter, C-terminal YPA_RS06175 IPR009420 Flagellar FlhE YPA_RS06180 IPR003535 Intimin/invasin bacterial adhesion mediator protein YPA_RS06180 IPR024519 Domain of unknown function DUF3442, intimin/invasin YPA_RS06185 IPR002686 Transposase IS200-like YPA_RS06190 IPR003344 Bacterial Ig-like, group 1 YPA_RS06190 IPR008964 Invasin/intimin cell-adhesion YPA_RS06190 IPR013117 Intimin, C-terminal YPA_RS06190 IPR015217 Invasin, domain 3 YPA_RS06190 IPR016186 C-type lectin-like YPA_RS06190 IPR016187 C-type lectin fold YPA_RS06190 IPR024519 Domain of unknown function DUF3442, intimin/invasin YPA_RS06195 IPR007809 FlgN-like domain YPA_RS06200 IPR007412 Anti-sigma-28 factor, FlgM YPA_RS06200 IPR031316 YPA_RS06200 YPA_RS06205 IPR013974 SAF domain YPA_RS06205 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal YPA_RS06210 IPR001444 Flagellar basal body rod protein, N-terminal YPA_RS06210 IPR006300 Flagellar basal-body rod protein FlgB YPA_RS06210 IPR019776 Flagellar basal body rod protein, conserved site YPA_RS06215 IPR001444 Flagellar basal body rod protein, N-terminal YPA_RS06215 IPR006299 Flagellar basal-body rod protein FlgC YPA_RS06215 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPA_RS06215 IPR019776 Flagellar basal body rod protein, conserved site YPA_RS06220 IPR005648 Flagellar hook capping protein YPA_RS06220 IPR025963 FlgD Tudor-like domain YPA_RS06220 IPR025965 FlgD Ig-like domain YPA_RS06225 IPR001444 Flagellar basal body rod protein, N-terminal YPA_RS06225 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPA_RS06225 IPR011491 Flagellar basal body FlaE YPA_RS06225 IPR019776 Flagellar basal body rod protein, conserved site YPA_RS06225 IPR020013 Fagellar hook-basal body protein, FlgE/F/G YPA_RS06230 IPR001444 Flagellar basal body rod protein, N-terminal YPA_RS06230 IPR020013 Fagellar hook-basal body protein, FlgE/F/G YPA_RS06240 IPR000527 Flagellar L-ring protein YPA_RS06245 IPR001782 Flagellar P-ring protein YPA_RS06250 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain YPA_RS06250 IPR013377 Flagellar rod assembly protein/muramidase FlgJ YPA_RS06250 IPR019301 Flagellar protein FlgJ, N-terminal YPA_RS06255 IPR001444 Flagellar basal body rod protein, N-terminal YPA_RS06255 IPR002371 Flagellar hook-associated protein, FlgK YPA_RS06255 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPA_RS06260 IPR001029 Flagellin, D0/D1 domain YPA_RS06260 IPR013384 Flagellar hook-associated protein 3 YPA_RS06265 IPR007324 Sugar-binding domain, putative YPA_RS06265 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS06265 IPR013324 RNA polymerase sigma factor, region 3/4 YPA_RS06270 IPR001303 Class II aldolase/adducin N-terminal YPA_RS06270 IPR002347 Glucose/ribitol dehydrogenase YPA_RS06270 IPR016040 NAD(P)-binding domain YPA_RS06270 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPA_RS06275 IPR001851 ABC transporter, permease YPA_RS06280 IPR025997 Periplasmic binding protein domain YPA_RS06280 IPR028082 Periplasmic binding protein-like I YPA_RS06285 IPR003439 ABC transporter-like YPA_RS06285 IPR003593 AAA+ ATPase domain YPA_RS06285 IPR017871 ABC transporter, conserved site YPA_RS06285 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS06290 IPR001851 ABC transporter, permease YPA_RS06295 IPR011611 Carbohydrate kinase PfkB YPA_RS06295 IPR029056 Ribokinase-like YPA_RS06300 IPR013321 Arc-type ribbon-helix-helix YPA_RS06300 IPR031807 YPA_RS06300 YPA_RS06305 IPR012933 HicA mRNA interferase family YPA_RS06310 IPR002010 Type III secretion system inner membrane R protein YPA_RS06310 IPR006303 Flagellar biosynthesis protein FliR YPA_RS06315 IPR002191 Bacterial export protein family 3 YPA_RS06315 IPR006305 Flagellar biosynthesis protein FliQ YPA_RS06320 IPR005837 Flagellar transport protein FliP YPA_RS06320 IPR005838 Type III secretion system inner membrane P protein YPA_RS06325 IPR022781 Flagellar biosynthesis protein, FliO YPA_RS06330 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb YPA_RS06330 IPR001543 Surface presentation of antigen (SpoA) YPA_RS06330 IPR012826 Flagellar motor switch FliN YPA_RS06330 IPR031576 YPA_RS06330 YPA_RS06335 IPR001543 Surface presentation of antigen (SpoA) YPA_RS06335 IPR001689 Flagellar motor switch protein FliM YPA_RS06335 IPR028976 CheC-like domain YPA_RS06340 IPR005503 Flagellar basal body-associated protein FliL YPA_RS06345 IPR001635 Flagellar hook-length control protein FliK YPA_RS06345 IPR021136 Flagellar hook-length control protein-like, C-terminal YPA_RS06350 IPR012823 Flagellar export FliJ YPA_RS06350 IPR018006 Flagellar FliJ, proteobacteria YPA_RS06355 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain YPA_RS06355 IPR003593 AAA+ ATPase domain YPA_RS06355 IPR005714 ATPase, type III secretion system, FliI/YscN YPA_RS06355 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site YPA_RS06355 IPR020005 Flagellar export ATPase FliI, clade 1 YPA_RS06355 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS06355 IPR032463 YPA_RS06355 YPA_RS06360 IPR000563 Flagellar assembly protein FliH YPA_RS06360 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE YPA_RS06365 IPR000090 Flagellar motor switch protein FliG YPA_RS06365 IPR011002 Flagellar motor switch protein FliG, alpha-helical YPA_RS06365 IPR023087 YPA_RS06365 YPA_RS06365 IPR028263 Flagellar motor switch protein FliG, N-terminal domain YPA_RS06365 IPR032779 YPA_RS06365 YPA_RS06370 IPR000067 Flagellar M-ring protein FliF YPA_RS06370 IPR006182 Secretory protein YscJ/FliF YPA_RS06370 IPR013556 Flagellar M-ring C-terminal YPA_RS06375 IPR001624 Flagellar hook-basal body complex protein FliE YPA_RS06385 IPR003812 Fido domain YPA_RS06385 IPR006440 Death on curing protein YPA_RS06390 IPR003265 HhH-GPD domain YPA_RS06390 IPR011257 DNA glycosylase YPA_RS06390 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal YPA_RS06400 IPR029016 GAF domain-like YPA_RS06405 IPR003313 AraC-type arabinose-binding/dimerisation domain YPA_RS06405 IPR009057 Homeodomain-like YPA_RS06405 IPR018060 DNA binding HTH domain, AraC-type YPA_RS06405 IPR020449 Transcription regulator HTH, AraC- type YPA_RS06415 IPR008622 Flagellar protein FliT YPA_RS06420 IPR003713 Flagellar protein FliS YPA_RS06425 IPR003481 Flagellar hook-associated protein 2, N-terminal YPA_RS06425 IPR010809 Flagellar hook-associated 2, C-terminal YPA_RS06425 IPR010810 Flagellin hook, IN motif YPA_RS06430 IPR001029 Flagellin, D0/D1 domain YPA_RS06430 IPR001492 Flagellin YPA_RS06435 IPR000943 RNA polymerase sigma-70 YPA_RS06435 IPR007624 RNA polymerase sigma-70 region 3 YPA_RS06435 IPR007627 RNA polymerase sigma-70 region 2 YPA_RS06435 IPR007630 RNA polymerase sigma-70 region 4 YPA_RS06435 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS06435 IPR012845 RNA polymerase sigma factor, FliA/WhiG YPA_RS06435 IPR013324 RNA polymerase sigma factor, region 3/4 YPA_RS06435 IPR013325 RNA polymerase sigma factor, region 2 YPA_RS06435 IPR014284 RNA polymerase sigma-70 like domain YPA_RS06435 IPR016263 RNA polymerase sporulation-specific sigma factor, SigK/SigE YPA_RS06435 IPR028617 RNA polymerase sigma factor FliA YPA_RS06440 IPR004107 Integrase, SAM-like, N-terminal YPA_RS06440 IPR022523 Flagellar regulator, FliZ YPA_RS06445 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPA_RS06445 IPR005966 D-cysteine desulfhydrase YPA_RS06445 IPR023702 D-cysteine desulphhydrase, bacterial YPA_RS06445 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase YPA_RS06450 IPR001320 Ionotropic glutamate receptor YPA_RS06450 IPR001638 Extracellular solute-binding protein, family 3 YPA_RS06450 IPR018313 Extracellular solute-binding protein, family 3, conserved site YPA_RS06455 IPR000515 MetI-like domain YPA_RS06455 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family YPA_RS06460 IPR003439 ABC transporter-like YPA_RS06460 IPR003593 AAA+ ATPase domain YPA_RS06460 IPR017871 ABC transporter, conserved site YPA_RS06460 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS06460 IPR030679 YPA_RS06460 YPA_RS06465 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS06475 IPR001270 ClpA/B family YPA_RS06475 IPR002611 IstB-like ATP-binding protein YPA_RS06475 IPR003593 AAA+ ATPase domain YPA_RS06475 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS06475 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS06480 IPR001584 Integrase, catalytic core YPA_RS06480 IPR006120 Resolvase, HTH domain YPA_RS06480 IPR009057 Homeodomain-like YPA_RS06480 IPR012337 Ribonuclease H-like domain YPA_RS06485 IPR002872 Proline dehydrogenase domain YPA_RS06485 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 YPA_RS06485 IPR010985 Ribbon-helix-helix YPA_RS06485 IPR015590 Aldehyde dehydrogenase domain YPA_RS06485 IPR016160 Aldehyde dehydrogenase, cysteine active site YPA_RS06485 IPR016161 Aldehyde/histidinol dehydrogenase YPA_RS06485 IPR016162 Aldehyde dehydrogenase, N-terminal YPA_RS06485 IPR016163 Aldehyde dehydrogenase, C-terminal YPA_RS06485 IPR024082 Proline dehydrogenase PutA, domain II YPA_RS06485 IPR024089 Proline dehydrogenase PutA, domain I/II YPA_RS06485 IPR024090 Proline dehydrogenase PutA, domain I YPA_RS06485 IPR025703 Bifunctional protein PutA YPA_RS06485 IPR029041 FAD-linked oxidoreductase-like YPA_RS06485 IPR029510 Aldehyde dehydrogenase, glutamic acid active site YPA_RS06495 IPR001734 Sodium/solute symporter YPA_RS06495 IPR011851 Sodium/proline symporter YPA_RS06495 IPR018212 Sodium/solute symporter, conserved site YPA_RS06500 IPR004923 Iron permease FTR1/Fip1/EfeU YPA_RS06505 IPR008972 Cupredoxin YPA_RS06505 IPR028096 EfeO-type cupredoxin-like domain YPA_RS06515 IPR005025 NADPH-dependent FMN reductase-like YPA_RS06515 IPR010089 Flavoprotein WrbA YPA_RS06515 IPR029039 Flavoprotein-like YPA_RS06520 IPR006652 Kelch repeat type 1 YPA_RS06520 IPR015915 Kelch-type beta propeller YPA_RS06520 IPR019936 Mutatrotase, YjhT-like YPA_RS06525 IPR002293 Amino acid/polyamine transporter I YPA_RS06525 IPR004840 Amino acid permease, conserved site YPA_RS06525 IPR004841 Amino acid permease/ SLC12A domain YPA_RS06535 IPR000758 Virulence-related outer membrane protein YPA_RS06535 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel YPA_RS06535 IPR027385 Outer membrane protein beta-barrel YPA_RS06550 IPR009707 GlpM YPA_RS06555 IPR019705 Protein of unknown function DUF2594 YPA_RS06560 IPR000792 Transcription regulator LuxR, C-terminal YPA_RS06560 IPR001789 Signal transduction response regulator, receiver domain YPA_RS06560 IPR011006 CheY-like superfamily YPA_RS06560 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS06560 IPR016032 Signal transduction response regulator, C-terminal effector YPA_RS06565 IPR000305 GIY-YIG nuclease superfamily YPA_RS06565 IPR001162 UvrC family homology region YPA_RS06565 IPR001943 UVR domain YPA_RS06565 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 YPA_RS06565 IPR004791 UvrABC system, subunit C YPA_RS06565 IPR010994 RuvA domain 2-like YPA_RS06565 IPR027299 GIY-YIG domain YPA_RS06570 IPR000462 CDP-alcohol phosphatidyltransferase YPA_RS06570 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YPA_RS06570 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial YPA_RS06590 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPA_RS06590 IPR013762 Integrase-like, catalytic core YPA_RS06590 IPR023109 Integrase/recombinase, N-terminal YPA_RS06595 IPR007694 DNA helicase, DnaB-like, C-terminal YPA_RS06615 IPR008514 Type VI secretion system effector, Hcp YPA_RS06620 IPR001584 Integrase, catalytic core YPA_RS06620 IPR012337 Ribonuclease H-like domain YPA_RS06625 IPR002514 Transposase IS3/IS911family YPA_RS06625 IPR009057 Homeodomain-like YPA_RS06625 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS06640 IPR021225 Protein of unknown function DUF2778 YPA_RS06655 IPR007048 GpW/Gp25/anti-adapter protein IraD YPA_RS06660 IPR006531 Gp5 N-terminal YPA_RS06660 IPR013046 Bacteriophage Mu/P2, baseplate assembly YPA_RS06665 IPR007460 Burkholderia phage Bups phi1, Orf7.3 YPA_RS06670 IPR025528 Protein of unknown function DUF4415 YPA_RS06675 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain YPA_RS06700 IPR000524 Transcription regulator HTH, GntR YPA_RS06700 IPR011663 UbiC transcription regulator-associated YPA_RS06700 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS06700 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain YPA_RS06710 IPR000683 Oxidoreductase, N-terminal YPA_RS06710 IPR016040 NAD(P)-binding domain YPA_RS06715 IPR006059 Bacterial extracellular solute-binding, family 1 YPA_RS06720 IPR000515 MetI-like domain YPA_RS06725 IPR000515 MetI-like domain YPA_RS06730 IPR003439 ABC transporter-like YPA_RS06730 IPR003593 AAA+ ATPase domain YPA_RS06730 IPR017871 ABC transporter, conserved site YPA_RS06730 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS06760 IPR001584 Integrase, catalytic core YPA_RS06760 IPR006120 Resolvase, HTH domain YPA_RS06760 IPR009057 Homeodomain-like YPA_RS06760 IPR012337 Ribonuclease H-like domain YPA_RS06765 IPR001270 ClpA/B family YPA_RS06765 IPR002611 IstB-like ATP-binding protein YPA_RS06765 IPR003593 AAA+ ATPase domain YPA_RS06765 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS06765 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS06770 IPR007985 Haemolysin expression modulating, HHA YPA_RS06775 IPR021364 Protein of unknown function DUF2857 YPA_RS06785 IPR010260 Bacteriophage P4, Orf88 YPA_RS06800 IPR000531 TonB-dependent receptor, beta-barrel YPA_RS06800 IPR010105 TonB-dependent siderophore receptor YPA_RS06800 IPR012910 TonB-dependent receptor, plug YPA_RS06805 IPR000873 AMP-dependent synthetase/ligase YPA_RS06805 IPR020845 AMP-binding, conserved site YPA_RS06805 IPR025110 AMP-binding enzyme C-terminal domain YPA_RS06810 IPR001031 Thioesterase YPA_RS06810 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS YPA_RS06810 IPR029058 Alpha/Beta hydrolase fold YPA_RS06815 IPR000683 Oxidoreductase, N-terminal YPA_RS06815 IPR010091 Thiazolinyl imide reductase YPA_RS06815 IPR016040 NAD(P)-binding domain YPA_RS06820 IPR001031 Thioesterase YPA_RS06820 IPR001227 Acyl transferase domain YPA_RS06820 IPR001242 Condensation domain YPA_RS06820 IPR006162 Phosphopantetheine attachment site YPA_RS06820 IPR009081 Acyl carrier protein-like YPA_RS06820 IPR013217 Methyltransferase type 12 YPA_RS06820 IPR013624 Non-ribosomal peptide synthetase YPA_RS06820 IPR013968 Polyketide synthase, KR YPA_RS06820 IPR014030 Beta-ketoacyl synthase, N-terminal YPA_RS06820 IPR014031 Beta-ketoacyl synthase, C-terminal YPA_RS06820 IPR014043 Acyl transferase YPA_RS06820 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase YPA_RS06820 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding YPA_RS06820 IPR016039 Thiolase-like YPA_RS06820 IPR016040 NAD(P)-binding domain YPA_RS06820 IPR018201 Beta-ketoacyl synthase, active site YPA_RS06820 IPR020801 Polyketide synthase, acyl transferase domain YPA_RS06820 IPR020802 Polyketide synthase, thioesterase domain YPA_RS06820 IPR020806 Polyketide synthase, phosphopantetheine-binding domain YPA_RS06820 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPA_RS06820 IPR029058 Alpha/Beta hydrolase fold YPA_RS06820 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPA_RS06820 IPR032821 YPA_RS06820 YPA_RS06825 IPR000873 AMP-dependent synthetase/ligase YPA_RS06825 IPR001242 Condensation domain YPA_RS06825 IPR006162 Phosphopantetheine attachment site YPA_RS06825 IPR009081 Acyl carrier protein-like YPA_RS06825 IPR010071 Amino acid adenylation domain YPA_RS06825 IPR013217 Methyltransferase type 12 YPA_RS06825 IPR013624 Non-ribosomal peptide synthetase YPA_RS06825 IPR020806 Polyketide synthase, phosphopantetheine-binding domain YPA_RS06825 IPR020845 AMP-binding, conserved site YPA_RS06825 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPA_RS06830 IPR009057 Homeodomain-like YPA_RS06830 IPR018060 DNA binding HTH domain, AraC-type YPA_RS06830 IPR018062 HTH domain AraC-type, conserved site YPA_RS06830 IPR020449 Transcription regulator HTH, AraC- type YPA_RS06835 IPR003439 ABC transporter-like YPA_RS06835 IPR003593 AAA+ ATPase domain YPA_RS06835 IPR011527 ABC transporter type 1, transmembrane domain YPA_RS06835 IPR017871 ABC transporter, conserved site YPA_RS06835 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS06840 IPR003439 ABC transporter-like YPA_RS06840 IPR003593 AAA+ ATPase domain YPA_RS06840 IPR011527 ABC transporter type 1, transmembrane domain YPA_RS06840 IPR017871 ABC transporter, conserved site YPA_RS06840 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS06845 IPR011701 Major facilitator superfamily YPA_RS06845 IPR020846 Major facilitator superfamily domain YPA_RS06850 IPR005801 ADC synthase YPA_RS06850 IPR015890 Chorismate binding, C-terminal YPA_RS06850 IPR019996 Salicylate synthase YPA_RS06855 IPR002104 Integrase, catalytic YPA_RS06855 IPR004107 Integrase, SAM-like, N-terminal YPA_RS06855 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPA_RS06855 IPR013762 Integrase-like, catalytic core YPA_RS06855 IPR023109 Integrase/recombinase, N-terminal YPA_RS06855 IPR025166 Domain of unknown function DUF4102 YPA_RS06865 IPR001829 Pili assembly chaperone, bacterial YPA_RS06865 IPR008962 PapD-like YPA_RS06865 IPR016147 PapD, N-terminal, bacterial YPA_RS06865 IPR016148 Pili assembly chaperone, C-terminal domain YPA_RS06865 IPR018046 Pili assembly chaperone, conserved site YPA_RS06870 IPR000259 Fimbrial-type adhesion domain YPA_RS06870 IPR008966 Adhesion domain YPA_RS06870 IPR011228 Uncharacterised conserved protein UCP029766 YPA_RS06875 IPR000015 Outer membrane usher protein YPA_RS06875 IPR025885 PapC, N-terminal domain YPA_RS06875 IPR025949 PapC-like, C-terminal domain YPA_RS06880 IPR001829 Pili assembly chaperone, bacterial YPA_RS06880 IPR008962 PapD-like YPA_RS06880 IPR016147 PapD, N-terminal, bacterial YPA_RS06880 IPR016148 Pili assembly chaperone, C-terminal domain YPA_RS06885 IPR000259 Fimbrial-type adhesion domain YPA_RS06885 IPR008966 Adhesion domain YPA_RS06890 IPR001638 Extracellular solute-binding protein, family 3 YPA_RS06890 IPR001789 Signal transduction response regulator, receiver domain YPA_RS06890 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPA_RS06890 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPA_RS06890 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPA_RS06890 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain YPA_RS06890 IPR011006 CheY-like superfamily YPA_RS06895 IPR000792 Transcription regulator LuxR, C-terminal YPA_RS06895 IPR001789 Signal transduction response regulator, receiver domain YPA_RS06895 IPR011006 CheY-like superfamily YPA_RS06895 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS06895 IPR016032 Signal transduction response regulator, C-terminal effector YPA_RS06900 IPR003702 Acetyl-CoA hydrolase/transferase YPA_RS06900 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain YPA_RS06905 IPR002539 MaoC-like domain YPA_RS06905 IPR029069 HotDog domain YPA_RS06910 IPR005000 HpcH/HpaI aldolase/citrate lyase domain YPA_RS06910 IPR011206 Citrate lyase beta subunit-like YPA_RS06910 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain YPA_RS06915 IPR000847 Transcription regulator HTH, LysR YPA_RS06915 IPR005119 LysR, substrate-binding YPA_RS06915 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS06920 IPR013783 Immunoglobulin-like fold YPA_RS06930 IPR011701 Major facilitator superfamily YPA_RS06930 IPR020846 Major facilitator superfamily domain YPA_RS06935 IPR002611 IstB-like ATP-binding protein YPA_RS06935 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS06945 IPR001584 Integrase, catalytic core YPA_RS06945 IPR006120 Resolvase, HTH domain YPA_RS06945 IPR009057 Homeodomain-like YPA_RS06945 IPR012337 Ribonuclease H-like domain YPA_RS06950 IPR005829 Sugar transporter, conserved site YPA_RS06950 IPR011701 Major facilitator superfamily YPA_RS06950 IPR020846 Major facilitator superfamily domain YPA_RS06955 IPR006680 Amidohydrolase 1 YPA_RS06955 IPR032466 YPA_RS06955 YPA_RS06960 IPR000847 Transcription regulator HTH, LysR YPA_RS06960 IPR005119 LysR, substrate-binding YPA_RS06960 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS06965 IPR003667 Electron transport complex, Rnf/Nqr YPA_RS06965 IPR010967 NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit YPA_RS06970 IPR004839 Aminotransferase, class I/classII YPA_RS06970 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPA_RS06970 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPA_RS06970 IPR015424 Pyridoxal phosphate-dependent transferase YPA_RS06975 IPR002293 Amino acid/polyamine transporter I YPA_RS06975 IPR004840 Amino acid permease, conserved site YPA_RS06975 IPR004841 Amino acid permease/ SLC12A domain YPA_RS06980 IPR001034 HTH DeoR N-terminal domain YPA_RS06980 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS06980 IPR014036 DeoR C-terminal sensor domain YPA_RS06980 IPR018356 Transcription regulator, HTH DeoR-type, conserved site YPA_RS06985 IPR012338 Beta-lactamase/transpeptidase-like YPA_RS06985 IPR015868 Glutaminase YPA_RS06990 IPR011701 Major facilitator superfamily YPA_RS06990 IPR020846 Major facilitator superfamily domain YPA_RS06995 IPR004923 Iron permease FTR1/Fip1/EfeU YPA_RS07000 IPR018470 Periplasmic metal-binding protein Tp34-type YPA_RS07005 IPR007029 YHS domain YPA_RS07005 IPR018758 Domain of unknown function DUF2318, membrane YPA_RS07010 IPR003838 Permease FtsX-like YPA_RS07015 IPR003838 Permease FtsX-like YPA_RS07015 IPR025857 MacB-like periplasmic core domain YPA_RS07020 IPR003439 ABC transporter-like YPA_RS07020 IPR003593 AAA+ ATPase domain YPA_RS07020 IPR017871 ABC transporter, conserved site YPA_RS07020 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS07025 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant YPA_RS07025 IPR012336 Thioredoxin-like fold YPA_RS07030 IPR009056 Cytochrome c-like domain YPA_RS07035 IPR004537 Tellurite resistance methyltransferase, TehB YPA_RS07035 IPR014431 Tellurite resistance methyltransferase, TehB type-2 YPA_RS07035 IPR014710 RmlC-like jelly roll fold YPA_RS07035 IPR015392 Domain of unknown function DUF1971 YPA_RS07035 IPR015985 Tellurite resistance methyltransferase TehB-like domain YPA_RS07035 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPA_RS07040 IPR000587 Creatinase, N-terminal YPA_RS07040 IPR000994 Peptidase M24, structural domain YPA_RS07040 IPR028980 Creatinase/Aminopeptidase P, N-terminal YPA_RS07040 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal YPA_RS07045 IPR011990 Tetratricopeptide-like helical domain YPA_RS07045 IPR023870 Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA YPA_RS07050 IPR002509 Polysaccharide deacetylase YPA_RS07050 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YPA_RS07050 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB YPA_RS07050 IPR032772 YPA_RS07050 YPA_RS07055 IPR001173 Glycosyltransferase 2-like YPA_RS07055 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA YPA_RS07055 IPR029044 Nucleotide-diphospho-sugar transferases YPA_RS07060 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD YPA_RS07065 IPR000182 GNAT domain YPA_RS07065 IPR016181 Acyl-CoA N-acyltransferase YPA_RS07075 IPR003714 PhoH-like protein YPA_RS07075 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS07080 IPR004713 Calcium/proton exchanger YPA_RS07080 IPR004837 Sodium/calcium exchanger membrane region YPA_RS07085 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPA_RS07085 IPR003660 HAMP linker domain YPA_RS07085 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain YPA_RS07085 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing YPA_RS07085 IPR029095 NarX-like, N-terminal YPA_RS07090 IPR000524 Transcription regulator HTH, GntR YPA_RS07090 IPR004839 Aminotransferase, class I/classII YPA_RS07090 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS07090 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPA_RS07090 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPA_RS07090 IPR015424 Pyridoxal phosphate-dependent transferase YPA_RS07100 IPR004636 Acetylornithine/Succinylornithine transaminase family YPA_RS07100 IPR005814 Aminotransferase class-III YPA_RS07100 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPA_RS07100 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPA_RS07100 IPR015424 Pyridoxal phosphate-dependent transferase YPA_RS07100 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria YPA_RS07100 IPR026330 Succinylornithine transaminase YPA_RS07105 IPR007041 Arginine N-succinyltransferase Ast/AOST YPA_RS07105 IPR016181 Acyl-CoA N-acyltransferase YPA_RS07105 IPR017650 Arginine N-succinyltransferase AstA YPA_RS07110 IPR015590 Aldehyde dehydrogenase domain YPA_RS07110 IPR016160 Aldehyde dehydrogenase, cysteine active site YPA_RS07110 IPR016161 Aldehyde/histidinol dehydrogenase YPA_RS07110 IPR016162 Aldehyde dehydrogenase, N-terminal YPA_RS07110 IPR016163 Aldehyde dehydrogenase, C-terminal YPA_RS07110 IPR017649 Succinylglutamic semialdehyde dehydrogenase YPA_RS07110 IPR029510 Aldehyde dehydrogenase, glutamic acid active site YPA_RS07115 IPR007079 Succinylarginine dihydrolase YPA_RS07120 IPR007036 Succinylglutamate desuccinylase/aspartoacylase YPA_RS07120 IPR016681 Succinylglutamate desuccinylase YPA_RS07125 IPR001702 Porin, Gram-negative type YPA_RS07125 IPR001897 Porin, gammaproteobacterial YPA_RS07125 IPR023614 Porin domain YPA_RS07130 IPR001584 Integrase, catalytic core YPA_RS07130 IPR006120 Resolvase, HTH domain YPA_RS07130 IPR009057 Homeodomain-like YPA_RS07130 IPR012337 Ribonuclease H-like domain YPA_RS07135 IPR001270 ClpA/B family YPA_RS07135 IPR002611 IstB-like ATP-binding protein YPA_RS07135 IPR003593 AAA+ ATPase domain YPA_RS07135 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS07135 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS07140 IPR002508 Cell wall hydrolase/autolysin, catalytic YPA_RS07140 IPR007709 N-formylglutamate amidohydrolase YPA_RS07140 IPR010247 N-formylglutamate deformylase YPA_RS07145 IPR005920 Imidazolonepropionase YPA_RS07145 IPR006680 Amidohydrolase 1 YPA_RS07145 IPR011059 Metal-dependent hydrolase, composite domain YPA_RS07145 IPR032466 YPA_RS07145 YPA_RS07150 IPR000524 Transcription regulator HTH, GntR YPA_RS07150 IPR010248 Histidine utilization repressor YPA_RS07150 IPR011663 UbiC transcription regulator-associated YPA_RS07150 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS07150 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain YPA_RS07155 IPR006680 Amidohydrolase 1 YPA_RS07155 IPR010252 Formiminoglutamate deiminase YPA_RS07155 IPR011059 Metal-dependent hydrolase, composite domain YPA_RS07155 IPR032466 YPA_RS07155 YPA_RS07160 IPR010282 Uncharacterised protein family HutD/Ves YPA_RS07160 IPR011051 RmlC-like cupin domain YPA_RS07160 IPR014710 RmlC-like jelly roll fold YPA_RS07165 IPR005801 ADC synthase YPA_RS07165 IPR015890 Chorismate binding, C-terminal YPA_RS07170 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YPA_RS07170 IPR016039 Thiolase-like YPA_RS07175 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal YPA_RS07175 IPR016039 Thiolase-like YPA_RS07180 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain YPA_RS07180 IPR016040 NAD(P)-binding domain YPA_RS07185 IPR001279 Beta-lactamase-like YPA_RS07190 IPR012685 Conserved hypothetical protein CHP02304, F390 synthetase-related YPA_RS07195 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain YPA_RS07195 IPR016040 NAD(P)-binding domain YPA_RS07200 IPR025993 Ceramide glucosyltransferase YPA_RS07200 IPR029044 Nucleotide-diphospho-sugar transferases YPA_RS07210 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase YPA_RS07210 IPR007235 Glycosyl transferase, family 28, C-terminal YPA_RS07225 IPR001207 Transposase, mutator type YPA_RS07230 IPR006597 Sel1-like YPA_RS07230 IPR011652 MORN variant YPA_RS07230 IPR011990 Tetratricopeptide-like helical domain YPA_RS07235 IPR006597 Sel1-like YPA_RS07235 IPR011990 Tetratricopeptide-like helical domain YPA_RS07235 IPR025115 Domain of unknown function DUF4034 YPA_RS07245 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family YPA_RS07245 IPR022133 Ribose-5-phosphate isomerase, C-terminal YPA_RS07250 IPR013217 Methyltransferase type 12 YPA_RS07250 IPR016584 S-adenosyl-L-methionine dependent methyltransferase, YbcY, predicted YPA_RS07250 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPA_RS07255 IPR002347 Glucose/ribitol dehydrogenase YPA_RS07255 IPR016040 NAD(P)-binding domain YPA_RS07255 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPA_RS07265 IPR011051 RmlC-like cupin domain YPA_RS07270 IPR011989 Armadillo-like helical YPA_RS07270 IPR016024 Armadillo-type fold YPA_RS07275 IPR000073 Alpha/beta hydrolase fold-1 YPA_RS07275 IPR029058 Alpha/Beta hydrolase fold YPA_RS07280 IPR011051 RmlC-like cupin domain YPA_RS07280 IPR013096 Cupin 2, conserved barrel YPA_RS07280 IPR014710 RmlC-like jelly roll fold YPA_RS07285 IPR003779 Carboxymuconolactone decarboxylase-like YPA_RS07285 IPR029032 AhpD-like YPA_RS07290 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPA_RS07290 IPR003660 HAMP linker domain YPA_RS07290 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPA_RS07290 IPR006290 Heavy metal sensor kinase YPA_RS07295 IPR001789 Signal transduction response regulator, receiver domain YPA_RS07295 IPR001867 Signal transduction response regulator, C-terminal YPA_RS07295 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response YPA_RS07295 IPR011006 CheY-like superfamily YPA_RS07295 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS07295 IPR016032 Signal transduction response regulator, C-terminal effector YPA_RS07300 IPR002925 Dienelactone hydrolase YPA_RS07300 IPR029058 Alpha/Beta hydrolase fold YPA_RS07305 IPR008254 Flavodoxin/nitric oxide synthase YPA_RS07305 IPR029039 Flavoprotein-like YPA_RS07310 IPR016174 Di-haem cytochrome, transmembrane YPA_RS07310 IPR025517 Domain of unknown function DUF4405 YPA_RS07315 IPR025145 Protein of unknown function DUF4087 YPA_RS07320 IPR028082 Periplasmic binding protein-like I YPA_RS07325 IPR013094 Alpha/beta hydrolase fold-3 YPA_RS07325 IPR029058 Alpha/Beta hydrolase fold YPA_RS07330 IPR001763 Rhodanese-like domain YPA_RS07335 IPR001584 Integrase, catalytic core YPA_RS07335 IPR012337 Ribonuclease H-like domain YPA_RS07345 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 YPA_RS07345 IPR006073 GTP binding domain YPA_RS07345 IPR012675 Beta-grasp domain YPA_RS07345 IPR012676 TGS-like YPA_RS07345 IPR013029 Domain of unknown function DUF933 YPA_RS07345 IPR023192 TGS-like domain YPA_RS07345 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS07350 IPR001328 Peptidyl-tRNA hydrolase YPA_RS07350 IPR018171 Peptidyl-tRNA hydrolase, conserved site YPA_RS07355 IPR019698 Protein of unknown function DUF2583 YPA_RS07365 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site YPA_RS07365 IPR005946 Ribose-phosphate diphosphokinase YPA_RS07365 IPR029057 Phosphoribosyltransferase-like YPA_RS07365 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain YPA_RS07375 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase YPA_RS07375 IPR006204 GHMP kinase N-terminal domain YPA_RS07375 IPR013750 GHMP kinase, C-terminal domain YPA_RS07375 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPA_RS07375 IPR020568 Ribosomal protein S5 domain 2-type fold YPA_RS07380 IPR004565 Outer membrane lipoprotein LolB YPA_RS07380 IPR029046 Lipoprotein localisation LolA/LolB/LppX YPA_RS07385 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase YPA_RS07385 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase YPA_RS07385 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal YPA_RS07385 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain YPA_RS07385 IPR016040 NAD(P)-binding domain YPA_RS07385 IPR018214 Glutamyl-tRNA reductase, conserved site YPA_RS07390 IPR000352 Peptide chain release factor class I/class II YPA_RS07390 IPR004373 Peptide chain release factor 1 YPA_RS07390 IPR005139 Peptide chain release factor YPA_RS07390 IPR014720 Double-stranded RNA-binding domain YPA_RS07395 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPA_RS07395 IPR004556 Modification methylase HemK YPA_RS07395 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific YPA_RS07395 IPR025714 Methyltransferase domain YPA_RS07395 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPA_RS07400 IPR007360 Invasion gene expression up-regulator, SirB YPA_RS07405 IPR011990 Tetratricopeptide-like helical domain YPA_RS07405 IPR032698 YPA_RS07405 YPA_RS07410 IPR006218 DAHP synthetase I/KDSA YPA_RS07410 IPR006269 3-deoxy-8-phosphooctulonate synthase YPA_RS07410 IPR013785 Aldolase-type TIM barrel YPA_RS07415 IPR001902 Sulphate anion transporter YPA_RS07415 IPR002645 STAS domain YPA_RS07420 IPR001270 ClpA/B family YPA_RS07420 IPR002611 IstB-like ATP-binding protein YPA_RS07420 IPR003593 AAA+ ATPase domain YPA_RS07420 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS07420 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS07425 IPR001584 Integrase, catalytic core YPA_RS07425 IPR006120 Resolvase, HTH domain YPA_RS07425 IPR009057 Homeodomain-like YPA_RS07425 IPR012337 Ribonuclease H-like domain YPA_RS07430 IPR001902 Sulphate anion transporter YPA_RS07430 IPR011547 Sulphate transporter YPA_RS07430 IPR018045 Sulphate anion transporter, conserved site YPA_RS07445 IPR004129 Glycerophosphoryl diester phosphodiesterase YPA_RS07445 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain YPA_RS07445 IPR030395 YPA_RS07445 YPA_RS07455 IPR000515 MetI-like domain YPA_RS07460 IPR000515 MetI-like domain YPA_RS07465 IPR003439 ABC transporter-like YPA_RS07465 IPR017871 ABC transporter, conserved site YPA_RS07465 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS07470 IPR002686 Transposase IS200-like YPA_RS07475 IPR003439 ABC transporter-like YPA_RS07475 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS07480 IPR004129 Glycerophosphoryl diester phosphodiesterase YPA_RS07480 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain YPA_RS07480 IPR030395 YPA_RS07480 YPA_RS07485 IPR000600 ROK YPA_RS07485 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS07495 IPR003141 Polymerase/histidinol phosphatase, N-terminal YPA_RS07495 IPR004013 PHP, C-terminal YPA_RS07495 IPR016195 Polymerase/histidinol phosphatase-like YPA_RS07495 IPR023710 Probable phosphatase YcdX YPA_RS07500 IPR020945 DMSO/Nitrate reductase chaperone YPA_RS07500 IPR026269 Tat proofreading chaperone DmsD-type YPA_RS07505 IPR010835 Protein of unknown function DUF1439 YPA_RS07510 IPR011701 Major facilitator superfamily YPA_RS07510 IPR020846 Major facilitator superfamily domain YPA_RS07510 IPR022855 Multidrug resistance protein MdtH YPA_RS07515 IPR000182 GNAT domain YPA_RS07515 IPR016181 Acyl-CoA N-acyltransferase YPA_RS07520 IPR000683 Oxidoreductase, N-terminal YPA_RS07520 IPR016040 NAD(P)-binding domain YPA_RS07525 IPR004268 Flagellin assembly, membrane protein MviN YPA_RS07530 IPR005565 Haemolysin activator HlyB YPA_RS07530 IPR013686 Polypeptide-transport-associated, ShlB-type YPA_RS07530 IPR027282 Two partner secretion pathway transporter YPA_RS07535 IPR008638 Filamentous haemagglutinin, N-terminal YPA_RS07535 IPR011050 Pectin lyase fold/virulence factor YPA_RS07535 IPR012334 Pectin lyase fold YPA_RS07535 IPR025157 Haemagluttinin repeat YPA_RS07540 IPR001278 Arginine-tRNA ligase YPA_RS07540 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPA_RS07540 IPR005148 Arginyl tRNA synthetase N-terminal domain YPA_RS07540 IPR008909 DALR anticodon binding YPA_RS07540 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding YPA_RS07540 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPA_RS07545 IPR010393 Protein of unknown function DUF991 YPA_RS07545 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase YPA_RS07550 IPR005627 Copper homeostasis protein CutC YPA_RS07550 IPR023648 Copper homeostasis CutC domain YPA_RS07555 IPR010017 tRNA (mo5U34)-methyltransferase YPA_RS07555 IPR027555 tRNA (mo5U34)-methyltransferase-like YPA_RS07555 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPA_RS07560 IPR005271 tRNA (cmo5U34)-methyltransferase YPA_RS07560 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPA_RS07565 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein YPA_RS07565 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain YPA_RS07570 IPR002763 Protein of unknown function DUF72 YPA_RS07575 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb YPA_RS07575 IPR004115 GAD-like domain YPA_RS07575 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) YPA_RS07575 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type YPA_RS07575 IPR004524 Aspartate-tRNA ligase, class IIb, bacterial/mitochondrial-type YPA_RS07575 IPR012340 Nucleic acid-binding, OB-fold YPA_RS07575 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like YPA_RS07575 IPR029351 GAD domain YPA_RS07580 IPR000086 NUDIX hydrolase domain YPA_RS07580 IPR003564 dATP pyrophosphohydrolase YPA_RS07580 IPR015797 NUDIX hydrolase domain-like YPA_RS07580 IPR020084 NUDIX hydrolase, conserved site YPA_RS07585 IPR002876 Transcriptional regulator TACO1-like YPA_RS07585 IPR017856 Integrase, N-terminal zinc-binding domain-like YPA_RS07585 IPR026563 Transcriptional regulator TACO1-like, domain 2 YPA_RS07585 IPR026564 Transcriptional regulator TACO1-like, domain 3 YPA_RS07585 IPR029072 YebC-like YPA_RS07590 IPR002176 Crossover junction endodeoxyribonuclease RuvC YPA_RS07590 IPR012337 Ribonuclease H-like domain YPA_RS07590 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site YPA_RS07595 IPR002686 Transposase IS200-like YPA_RS07600 IPR000085 Bacterial DNA recombination protein RuvA YPA_RS07600 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 YPA_RS07600 IPR010994 RuvA domain 2-like YPA_RS07600 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal YPA_RS07600 IPR012340 Nucleic acid-binding, OB-fold YPA_RS07600 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial YPA_RS07605 IPR003593 AAA+ ATPase domain YPA_RS07605 IPR004605 DNA helicase, Holliday junction RuvB type YPA_RS07605 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal YPA_RS07605 IPR008824 DNA helicase, Holliday junction RuvB type, N-terminal YPA_RS07605 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS07605 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS07610 IPR001626 ABC-3 YPA_RS07610 IPR029022 ABC transporter, BtuC-like YPA_RS07615 IPR003439 ABC transporter-like YPA_RS07615 IPR003593 AAA+ ATPase domain YPA_RS07615 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS07620 IPR006127 Periplasmic solute binding protein family YPA_RS07625 IPR007340 Opacity-associated protein A YPA_RS07625 IPR011055 Duplicated hybrid motif YPA_RS07625 IPR013731 Opacity-associated protein A, N-terminal YPA_RS07625 IPR016047 Peptidase M23 YPA_RS07625 IPR018392 LysM domain YPA_RS07630 IPR004960 Bacterial lipid A biosynthesis acyltransferase YPA_RS07630 IPR011921 Lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase YPA_RS07635 IPR001697 Pyruvate kinase YPA_RS07635 IPR011037 Pyruvate kinase-like, insert domain YPA_RS07635 IPR015793 Pyruvate kinase, barrel YPA_RS07635 IPR015794 Pyruvate kinase, alpha/beta YPA_RS07635 IPR015795 Pyruvate kinase, C-terminal YPA_RS07635 IPR015806 Pyruvate kinase, beta-barrel insert domain YPA_RS07635 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain YPA_RS07635 IPR018209 Pyruvate kinase, active site YPA_RS07640 IPR000281 Helix-turn-helix protein RpiR YPA_RS07640 IPR001347 Sugar isomerase (SIS) YPA_RS07640 IPR009057 Homeodomain-like YPA_RS07640 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS07645 IPR001282 Glucose-6-phosphate dehydrogenase YPA_RS07645 IPR016040 NAD(P)-binding domain YPA_RS07645 IPR019796 Glucose-6-phosphate dehydrogenase, active site YPA_RS07645 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding YPA_RS07645 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal YPA_RS07655 IPR000887 KDPG/KHG aldolase YPA_RS07655 IPR013785 Aldolase-type TIM barrel YPA_RS07655 IPR031337 YPA_RS07655 YPA_RS07655 IPR031338 YPA_RS07655 YPA_RS07660 IPR000390 Small multidrug resistance protein family YPA_RS07660 IPR023740 Spermidine export protein MdtJ YPA_RS07665 IPR000390 Small multidrug resistance protein family YPA_RS07665 IPR023737 Spermidine export protein MdtI YPA_RS07670 IPR006175 YjgF/Yer057p/UK114 family YPA_RS07670 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like YPA_RS07670 IPR019897 YjgF-like protein, conserved site YPA_RS07675 IPR006555 ATP-dependent helicase, C-terminal YPA_RS07675 IPR010614 DEAD2 YPA_RS07675 IPR011545 DEAD/DEAH box helicase domain YPA_RS07675 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YPA_RS07675 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS07680 IPR000905 Gcp-like domain YPA_RS07680 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ YPA_RS07685 IPR004658 Outer membrane lipoprotein Slp YPA_RS07690 IPR000873 AMP-dependent synthetase/ligase YPA_RS07690 IPR020845 AMP-binding, conserved site YPA_RS07690 IPR025110 AMP-binding enzyme C-terminal domain YPA_RS07695 IPR002121 HRDC domain YPA_RS07695 IPR002562 3'-5' exonuclease domain YPA_RS07695 IPR006292 Ribonuclease D YPA_RS07695 IPR010997 HRDC-like YPA_RS07695 IPR012337 Ribonuclease H-like domain YPA_RS07700 IPR005527 Septum formation topological specificity factor MinE YPA_RS07705 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain YPA_RS07705 IPR010223 ATP binding protein MinD, bacterial-type YPA_RS07705 IPR025501 ATP binding protein MinD YPA_RS07705 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS07710 IPR005526 Septum formation inhibitor MinC, C-terminal YPA_RS07710 IPR007874 Septum formation inhibitor MinC, N-terminal YPA_RS07710 IPR013033 Septum formation inhibitor MinC YPA_RS07710 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal YPA_RS07715 IPR027354 YcgL domain YPA_RS07720 IPR011757 Lytic transglycosylase MltB YPA_RS07720 IPR011970 Lytic murein transglycosylase YPA_RS07720 IPR023346 Lysozyme-like domain YPA_RS07720 IPR031304 YPA_RS07720 YPA_RS07725 IPR011234 Fumarylacetoacetase, C-terminal-related YPA_RS07730 IPR005358 Putative zinc- or iron-chelating domain containing protein YPA_RS07730 IPR008228 Uncharacterised conserved protein UCP006173 YPA_RS07735 IPR002104 Integrase, catalytic YPA_RS07735 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPA_RS07735 IPR013762 Integrase-like, catalytic core YPA_RS07735 IPR022000 Domain of unknown function (DUF3596) YPA_RS07735 IPR023109 Integrase/recombinase, N-terminal YPA_RS07740 IPR001584 Integrase, catalytic core YPA_RS07740 IPR006120 Resolvase, HTH domain YPA_RS07740 IPR009057 Homeodomain-like YPA_RS07740 IPR012337 Ribonuclease H-like domain YPA_RS07745 IPR001270 ClpA/B family YPA_RS07745 IPR002611 IstB-like ATP-binding protein YPA_RS07745 IPR003593 AAA+ ATPase domain YPA_RS07745 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS07745 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS07750 IPR017029 Putative phage head morphogenesis protein YPA_RS07760 IPR003343 Bacterial Ig-like, group 2 YPA_RS07760 IPR008964 Invasin/intimin cell-adhesion YPA_RS07785 IPR025395 Protein of unknown function DUF4128 YPA_RS07790 IPR003343 Bacterial Ig-like, group 2 YPA_RS07790 IPR008964 Invasin/intimin cell-adhesion YPA_RS07790 IPR014918 Bacteriophage T1, Orf41 YPA_RS07795 IPR014859 Protein of unknown function DUF1789 YPA_RS07800 IPR014915 Bacteriophage TLS, TfmB YPA_RS07805 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal YPA_RS07805 IPR009628 Bacteriophage lambda, GpH, tail tape measure, N-terminal YPA_RS07810 IPR010265 Bacteriophage lambda, GpM, minor tail YPA_RS07820 IPR002686 Transposase IS200-like YPA_RS07825 IPR006487 Bacteriophage lambda, GpL, minor tail YPA_RS07830 IPR000064 Endopeptidase, NLPC/P60 domain YPA_RS07830 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain YPA_RS07830 IPR028090 JAB domain, prokaryotic YPA_RS07840 IPR005569 Arc-like DNA binding YPA_RS07840 IPR010985 Ribbon-helix-helix YPA_RS07840 IPR013321 Arc-type ribbon-helix-helix YPA_RS07850 IPR003497 BRO N-terminal domain YPA_RS07865 IPR010654 Bacteriophage lambda tail assembly I YPA_RS07880 IPR003961 Fibronectin, type III YPA_RS07880 IPR013783 Immunoglobulin-like fold YPA_RS07880 IPR015406 Domain of unknown function DUF1983 YPA_RS07880 IPR032876 YPA_RS07880 YPA_RS07890 IPR029056 Ribokinase-like YPA_RS07895 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly YPA_RS07905 IPR001207 Transposase, mutator type YPA_RS07915 IPR000192 Aminotransferase class V domain YPA_RS07915 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPA_RS07915 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPA_RS07915 IPR015424 Pyridoxal phosphate-dependent transferase YPA_RS07915 IPR016454 Cysteine desulfurase, NifS YPA_RS07930 IPR003752 Disulphide bond formation protein DsbB/BdbC YPA_RS07930 IPR022920 Disulphide bond formation protein DsbB YPA_RS07930 IPR023380 Disulphide bond formation protein DsbB-like domain YPA_RS07935 IPR004671 Na+/H+ antiporter NhaB YPA_RS07940 IPR000524 Transcription regulator HTH, GntR YPA_RS07940 IPR008920 Transcription regulator FadR/GntR, C-terminal YPA_RS07940 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS07940 IPR014178 Fatty acid response transcription factor FadR YPA_RS07940 IPR028374 FadR, C-terminal domain YPA_RS07945 IPR007390 Sporulation stage V, protein R YPA_RS07950 IPR006076 FAD dependent oxidoreductase YPA_RS07950 IPR023080 D-amino acid dehydrogenase small subunit, DadA YPA_RS07950 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPA_RS07955 IPR001958 Tetracycline resistance protein, TetA/multidrug resistance protein MdtG YPA_RS07955 IPR004812 Drug resistance transporter Bcr/CmlA subfamily YPA_RS07955 IPR005829 Sugar transporter, conserved site YPA_RS07955 IPR011701 Major facilitator superfamily YPA_RS07955 IPR020846 Major facilitator superfamily domain YPA_RS07960 IPR003829 Pirin, N-terminal domain YPA_RS07960 IPR008778 Pirin, C-terminal domain YPA_RS07960 IPR011051 RmlC-like cupin domain YPA_RS07960 IPR012093 Pirin YPA_RS07960 IPR014710 RmlC-like jelly roll fold YPA_RS07965 IPR000847 Transcription regulator HTH, LysR YPA_RS07965 IPR005119 LysR, substrate-binding YPA_RS07965 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS07970 IPR000620 Drug/metabolite transporter YPA_RS07975 IPR006698 Thermus phage phiYS40, Orf56 YPA_RS07980 IPR010650 PrkA C-terminal domain YPA_RS07980 IPR013153 PrkA AAA domain YPA_RS07980 IPR016230 Serine-protein kinase, PrkA YPA_RS07980 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS07985 IPR010583 MltA-interacting MipA YPA_RS07985 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel YPA_RS07990 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase YPA_RS07990 IPR011013 Galactose mutarotase-like domain YPA_RS07990 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup YPA_RS07990 IPR025532 Glucose-6-phosphate 1-epimerase YPA_RS07995 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I YPA_RS07995 IPR016040 NAD(P)-binding domain YPA_RS07995 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain YPA_RS07995 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain YPA_RS07995 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site YPA_RS07995 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family YPA_RS08000 IPR002579 Peptide methionine sulphoxide reductase MrsB YPA_RS08000 IPR011057 Mss4-like YPA_RS08000 IPR028427 Peptide methionine sulfoxide reductase YPA_RS08005 IPR009749 Protein of unknown function DUF1315 YPA_RS08010 IPR000868 Isochorismatase-like YPA_RS08015 IPR006033 L-asparaginase, type I YPA_RS08015 IPR006034 Asparaginase/glutaminase YPA_RS08015 IPR020827 Asparaginase/glutaminase, active site 1 YPA_RS08015 IPR027473 L-asparaginase, C-terminal domain YPA_RS08015 IPR027474 L-asparaginase, N-terminal YPA_RS08015 IPR027475 Asparaginase/glutaminase, active site 2 YPA_RS08020 IPR002142 Peptidase S49 YPA_RS08020 IPR004634 Peptidase S49, protease IV YPA_RS08020 IPR004635 Peptidase S49, SppA YPA_RS08020 IPR029045 ClpP/crotonase-like domain YPA_RS08025 IPR000415 Nitroreductase-like YPA_RS08025 IPR026021 Putative NAD(P)H nitroreductase YdjA-like YPA_RS08025 IPR029479 Nitroreductase YPA_RS08030 IPR004536 Selenide water dikinase YPA_RS08030 IPR010918 AIR synthase-related protein, C-terminal domain YPA_RS08030 IPR016188 PurM, N-terminal-like YPA_RS08030 IPR023061 Selenide, water dikinase, class I YPA_RS08035 IPR000380 DNA topoisomerase, type IA YPA_RS08035 IPR003601 DNA topoisomerase, type IA, domain 2 YPA_RS08035 IPR003602 DNA topoisomerase, type IA, DNA-binding domain YPA_RS08035 IPR005738 DNA topoisomerase III YPA_RS08035 IPR006171 Toprim domain YPA_RS08035 IPR013497 DNA topoisomerase, type IA, central YPA_RS08035 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 YPA_RS08035 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 YPA_RS08035 IPR023405 DNA topoisomerase, type IA, core domain YPA_RS08035 IPR023406 DNA topoisomerase, type IA, active site YPA_RS08040 IPR009971 Protein of unknown function DUF1496 YPA_RS08045 IPR000086 NUDIX hydrolase domain YPA_RS08045 IPR015797 NUDIX hydrolase domain-like YPA_RS08045 IPR020084 NUDIX hydrolase, conserved site YPA_RS08045 IPR020476 NUDIX hydrolase YPA_RS08050 IPR004808 AP endonuclease 1 YPA_RS08050 IPR005135 Endonuclease/exonuclease/phosphatase YPA_RS08050 IPR020847 AP endonuclease 1, binding site YPA_RS08050 IPR020848 AP endonuclease 1, conserved site YPA_RS08055 IPR000847 Transcription regulator HTH, LysR YPA_RS08055 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS08065 IPR001207 Transposase, mutator type YPA_RS08070 IPR002376 Formyl transferase, N-terminal YPA_RS08070 IPR002912 ACT domain YPA_RS08070 IPR004810 Formyltetrahydrofolate deformylase YPA_RS08075 IPR004027 SEC-C motif YPA_RS08075 IPR023006 Uncharacterised protein family UPF0225 YPA_RS08075 IPR032710 YPA_RS08075 YPA_RS08080 IPR001789 Signal transduction response regulator, receiver domain YPA_RS08080 IPR011006 CheY-like superfamily YPA_RS08080 IPR028616 Regulator of RpoS YPA_RS08085 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal YPA_RS08085 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YPA_RS08085 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation YPA_RS08085 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal YPA_RS08085 IPR016040 NAD(P)-binding domain YPA_RS08085 IPR017476 UDP-glucose/GDP-mannose dehydrogenase YPA_RS08085 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type YPA_RS08090 IPR001801 Histone-like protein H-NS YPA_RS08090 IPR027444 Histone-like protein H-NS, C-terminal domain YPA_RS08090 IPR027454 Histone-like protein H-NS family, oligomerisation domain YPA_RS08095 IPR001267 Thymidine kinase YPA_RS08095 IPR020633 Thymidine kinase, conserved site YPA_RS08095 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS08100 IPR001270 ClpA/B family YPA_RS08100 IPR002611 IstB-like ATP-binding protein YPA_RS08100 IPR003593 AAA+ ATPase domain YPA_RS08100 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS08100 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS08105 IPR001584 Integrase, catalytic core YPA_RS08105 IPR006120 Resolvase, HTH domain YPA_RS08105 IPR009057 Homeodomain-like YPA_RS08105 IPR012337 Ribonuclease H-like domain YPA_RS08110 IPR001670 Alcohol dehydrogenase, iron-type YPA_RS08110 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase YPA_RS08110 IPR015590 Aldehyde dehydrogenase domain YPA_RS08110 IPR016161 Aldehyde/histidinol dehydrogenase YPA_RS08110 IPR016162 Aldehyde dehydrogenase, N-terminal YPA_RS08110 IPR016163 Aldehyde dehydrogenase, C-terminal YPA_RS08110 IPR018211 Alcohol dehydrogenase, iron-type, conserved site YPA_RS08115 IPR002771 Multiple antibiotic resistance (MarC)-related YPA_RS08120 IPR000914 Bacterial extracellular solute-binding protein, family 5 YPA_RS08120 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site YPA_RS08120 IPR030678 YPA_RS08120 YPA_RS08125 IPR000515 MetI-like domain YPA_RS08130 IPR000515 MetI-like domain YPA_RS08130 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YPA_RS08135 IPR003439 ABC transporter-like YPA_RS08135 IPR003593 AAA+ ATPase domain YPA_RS08135 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YPA_RS08135 IPR017871 ABC transporter, conserved site YPA_RS08135 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS08140 IPR003439 ABC transporter-like YPA_RS08140 IPR003593 AAA+ ATPase domain YPA_RS08140 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YPA_RS08140 IPR017871 ABC transporter, conserved site YPA_RS08140 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS08150 IPR007376 dsDNA mimic, putative YPA_RS08155 IPR001736 Phospholipase D/Transphosphatidylase YPA_RS08155 IPR022924 Cardiolipin synthase YPA_RS08155 IPR025202 Phospholipase D-like domain YPA_RS08155 IPR027379 Cardiolipin synthase N-terminal YPA_RS08155 IPR030840 YPA_RS08155 YPA_RS08160 IPR000758 Virulence-related outer membrane protein YPA_RS08160 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel YPA_RS08160 IPR027385 Outer membrane protein beta-barrel YPA_RS08170 IPR027392 Transcription factor zinc-finger YPA_RS08175 IPR005545 YCII-related YPA_RS08175 IPR011008 Dimeric alpha-beta barrel YPA_RS08180 IPR003538 Gram-negative bacterial TonB protein YPA_RS08180 IPR006260 TonB, C-terminal YPA_RS08185 IPR001207 Transposase, mutator type YPA_RS08190 IPR006683 Thioesterase superfamily YPA_RS08190 IPR029069 HotDog domain YPA_RS08195 IPR006008 Intracellular septation protein A YPA_RS08200 IPR001902 Sulphate anion transporter YPA_RS08200 IPR011547 Sulphate transporter YPA_RS08205 IPR001902 Sulphate anion transporter YPA_RS08205 IPR002645 STAS domain YPA_RS08210 IPR009627 Uncharacterised protein family UPF0259 YPA_RS08220 IPR000758 Virulence-related outer membrane protein YPA_RS08220 IPR005618 Outer membrane protein, OmpW YPA_RS08220 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel YPA_RS08225 IPR007055 BON domain YPA_RS08225 IPR014004 Transport-associated and nodulation domain, bacteria YPA_RS08230 IPR002028 Tryptophan synthase, alpha chain YPA_RS08230 IPR011060 Ribulose-phosphate binding barrel YPA_RS08230 IPR013785 Aldolase-type TIM barrel YPA_RS08230 IPR018204 Tryptophan synthase, alpha chain, active site YPA_RS08235 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPA_RS08235 IPR006653 Tryptophan synthase, beta chain, conserved site YPA_RS08235 IPR006654 Tryptophan synthase, beta chain YPA_RS08235 IPR023026 Tryptophan synthase beta chain/beta chain-like YPA_RS08240 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) like domain YPA_RS08240 IPR001468 Indole-3-glycerol phosphate synthase, conserved site YPA_RS08240 IPR011060 Ribulose-phosphate binding barrel YPA_RS08240 IPR013785 Aldolase-type TIM barrel YPA_RS08240 IPR013798 Indole-3-glycerol phosphate synthase YPA_RS08245 IPR000312 Glycosyl transferase, family 3 YPA_RS08245 IPR005940 Anthranilate phosphoribosyl transferase YPA_RS08245 IPR017459 Glycosyl transferase family 3, N-terminal domain YPA_RS08250 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain YPA_RS08250 IPR017926 Glutamine amidotransferase YPA_RS08250 IPR029062 Class I glutamine amidotransferase-like YPA_RS08255 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial YPA_RS08255 IPR005801 ADC synthase YPA_RS08255 IPR006805 Anthranilate synthase component I, N-terminal YPA_RS08255 IPR015890 Chorismate binding, C-terminal YPA_RS08255 IPR019999 Anthranilate synthase component I - like YPA_RS08260 IPR013205 Leader peptide, tryptophan-operon YPA_RS08270 IPR003141 Polymerase/histidinol phosphatase, N-terminal YPA_RS08270 IPR004013 PHP, C-terminal YPA_RS08270 IPR016195 Polymerase/histidinol phosphatase-like YPA_RS08275 IPR006070 YrdC-like domain YPA_RS08275 IPR017945 DHBP synthase RibB-like alpha/beta domain YPA_RS08280 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F YPA_RS08280 IPR002942 RNA-binding S4 domain YPA_RS08280 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F YPA_RS08280 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site YPA_RS08280 IPR020103 Pseudouridine synthase, catalytic domain YPA_RS08285 IPR003724 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR YPA_RS08285 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain YPA_RS08285 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS08290 IPR002347 Glucose/ribitol dehydrogenase YPA_RS08290 IPR016040 NAD(P)-binding domain YPA_RS08290 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPA_RS08295 IPR002142 Peptidase S49 YPA_RS08295 IPR013703 Peptidase S49, N-terminal proteobacteria YPA_RS08295 IPR029045 ClpP/crotonase-like domain YPA_RS08300 IPR019633 Protein of unknown function DUF2498 YPA_RS08310 IPR000380 DNA topoisomerase, type IA YPA_RS08310 IPR003601 DNA topoisomerase, type IA, domain 2 YPA_RS08310 IPR003602 DNA topoisomerase, type IA, DNA-binding domain YPA_RS08310 IPR005733 DNA topoisomerase I, bacterial-type YPA_RS08310 IPR006171 Toprim domain YPA_RS08310 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type YPA_RS08310 IPR013497 DNA topoisomerase, type IA, central YPA_RS08310 IPR013498 DNA topoisomerase, type IA, zn finger YPA_RS08310 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 YPA_RS08310 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 YPA_RS08310 IPR023405 DNA topoisomerase, type IA, core domain YPA_RS08310 IPR023406 DNA topoisomerase, type IA, active site YPA_RS08310 IPR028612 DNA topoisomerase I, type IA YPA_RS08315 IPR000847 Transcription regulator HTH, LysR YPA_RS08315 IPR005119 LysR, substrate-binding YPA_RS08315 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS08325 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel YPA_RS08325 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha YPA_RS08325 IPR006249 Aconitate/iron regulatory protein 2 YPA_RS08325 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YPA_RS08325 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 YPA_RS08325 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 YPA_RS08325 IPR015937 Aconitase/isopropylmalate dehydratase YPA_RS08325 IPR018136 Aconitase family, 4Fe-4S cluster binding site YPA_RS08330 IPR000926 GTP cyclohydrolase II, RibA YPA_RS08330 IPR032677 YPA_RS08330 YPA_RS08335 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPA_RS08340 IPR010445 Protein of unknown function DUF1049 YPA_RS08340 IPR032906 YPA_RS08340 YPA_RS08345 IPR011990 Tetratricopeptide-like helical domain YPA_RS08345 IPR019734 Tetratricopeptide repeat YPA_RS08345 IPR030865 YPA_RS08345 YPA_RS08350 IPR010985 Ribbon-helix-helix YPA_RS08350 IPR013321 Arc-type ribbon-helix-helix YPA_RS08360 IPR001754 Orotidine 5'-phosphate decarboxylase domain YPA_RS08360 IPR011060 Ribulose-phosphate binding barrel YPA_RS08360 IPR013785 Aldolase-type TIM barrel YPA_RS08360 IPR014732 Orotidine 5'-phosphate decarboxylase YPA_RS08360 IPR018089 Orotidine 5'-phosphate decarboxylase, active site YPA_RS08365 IPR001950 Translation initiation factor SUI1 YPA_RS08365 IPR005872 Archaeal/bacterial translation initiation factor SUI1 YPA_RS08370 IPR008816 Glycine zipper 2TM domain YPA_RS08375 IPR001303 Class II aldolase/adducin N-terminal YPA_RS08375 IPR004661 L-ribulose-5-phosphate 4-epimerase YPA_RS08380 IPR018680 Protein of unknown function DUF2164 YPA_RS08385 IPR001585 Transaldolase YPA_RS08385 IPR004731 Transaldolase 3A/3B YPA_RS08385 IPR013785 Aldolase-type TIM barrel YPA_RS08385 IPR018225 Transaldolase, active site YPA_RS08390 IPR007423 Protein of unknown function DUF466 YPA_RS08395 IPR003706 Carbon starvation protein CstA YPA_RS08395 IPR025299 CstA C-terminal domain YPA_RS08400 IPR003029 Ribosomal protein S1, RNA-binding domain YPA_RS08400 IPR004476 Ribonuclease II/ribonuclease R YPA_RS08400 IPR011129 Cold shock protein YPA_RS08400 IPR011804 Ribonuclease II YPA_RS08400 IPR012340 Nucleic acid-binding, OB-fold YPA_RS08400 IPR013223 Ribonuclease B, N-terminal OB domain YPA_RS08400 IPR022966 Ribonuclease II/R, conserved site YPA_RS08405 IPR011701 Major facilitator superfamily YPA_RS08405 IPR020846 Major facilitator superfamily domain YPA_RS08410 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain YPA_RS08410 IPR016040 NAD(P)-binding domain YPA_RS08415 IPR000445 Helix-hairpin-helix motif YPA_RS08415 IPR003265 HhH-GPD domain YPA_RS08415 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif YPA_RS08415 IPR004035 Endonuclease III, iron-sulphur binding site YPA_RS08415 IPR004036 Endonuclease III-like, conserved site-2 YPA_RS08415 IPR005759 Endonuclease III YPA_RS08415 IPR011257 DNA glycosylase YPA_RS08415 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal YPA_RS08420 IPR003667 Electron transport complex, Rnf/Nqr YPA_RS08420 IPR010968 Electron transport complex, RnfE YPA_RS08425 IPR007329 FMN-binding YPA_RS08425 IPR010209 Electron transport complex, RnfG YPA_RS08430 IPR004338 NADH-quinone reductase NQR2/RnfD YPA_RS08430 IPR011303 Electron transport complex, RnfD YPA_RS08435 IPR009057 Homeodomain-like YPA_RS08435 IPR011256 Regulatory factor, effector binding domain YPA_RS08435 IPR018060 DNA binding HTH domain, AraC-type YPA_RS08435 IPR020449 Transcription regulator HTH, AraC- type YPA_RS08435 IPR029442 GyrI-like small molecule binding domain YPA_RS08440 IPR009051 Alpha-helical ferredoxin YPA_RS08440 IPR010208 Electron transport complex protein RnfC YPA_RS08440 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit YPA_RS08440 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPA_RS08440 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPA_RS08440 IPR019554 Soluble ligand binding domain YPA_RS08440 IPR026902 RnfC Barrel sandwich hybrid domain YPA_RS08445 IPR007202 4Fe-4S domain YPA_RS08445 IPR010207 Electron transport complex, RnfB YPA_RS08445 IPR016463 Electron transport complex, RnfB, Proteobacteria YPA_RS08445 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPA_RS08450 IPR003667 Electron transport complex, Rnf/Nqr YPA_RS08450 IPR011293 Electron transport complex, RnfA YPA_RS08455 IPR019690 Protein of unknown function DUF2569 YPA_RS08460 IPR003439 ABC transporter-like YPA_RS08460 IPR011527 ABC transporter type 1, transmembrane domain YPA_RS08460 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS08465 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS08470 IPR003997 RTX secretion protein D, Gram-negative bacteria YPA_RS08475 IPR003997 RTX secretion protein D, Gram-negative bacteria YPA_RS08475 IPR006143 RND efflux pump, membrane fusion protein YPA_RS08475 IPR006144 Secretion protein HlyD, conserved site YPA_RS08480 IPR003439 ABC transporter-like YPA_RS08480 IPR003593 AAA+ ATPase domain YPA_RS08480 IPR005074 Peptidase C39, bacteriocin processing YPA_RS08480 IPR010132 ATPase, type I secretion system, HlyB YPA_RS08480 IPR011527 ABC transporter type 1, transmembrane domain YPA_RS08480 IPR017871 ABC transporter, conserved site YPA_RS08480 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS08485 IPR003762 L-arabinose isomerase YPA_RS08485 IPR004216 L-fucose/L-arabinose isomerase, C-terminal YPA_RS08485 IPR009015 L-fucose isomerase, N-terminal/central domain YPA_RS08485 IPR024664 L-arabinose isomerase, C-terminal YPA_RS08490 IPR005929 L-ribulokinase YPA_RS08490 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPA_RS08490 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPA_RS08495 IPR001761 Periplasmic binding protein/LacI sugar binding domain YPA_RS08495 IPR026266 L-arabinose-binding periplasmic protein YPA_RS08495 IPR028082 Periplasmic binding protein-like I YPA_RS08500 IPR003439 ABC transporter-like YPA_RS08500 IPR003593 AAA+ ATPase domain YPA_RS08500 IPR017871 ABC transporter, conserved site YPA_RS08500 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS08505 IPR001851 ABC transporter, permease YPA_RS08510 IPR003313 AraC-type arabinose-binding/dimerisation domain YPA_RS08510 IPR009057 Homeodomain-like YPA_RS08510 IPR018060 DNA binding HTH domain, AraC-type YPA_RS08510 IPR018062 HTH domain AraC-type, conserved site YPA_RS08510 IPR020449 Transcription regulator HTH, AraC- type YPA_RS08515 IPR000683 Oxidoreductase, N-terminal YPA_RS08515 IPR004104 Oxidoreductase, C-terminal YPA_RS08515 IPR016040 NAD(P)-binding domain YPA_RS08520 IPR016833 Putative sodium bile acid cotransporter YPA_RS08530 IPR010352 Protein of unknown function DUF945 YPA_RS08535 IPR001250 Mannose-6-phosphate isomerase, type I YPA_RS08535 IPR011051 RmlC-like cupin domain YPA_RS08535 IPR014710 RmlC-like jelly roll fold YPA_RS08535 IPR016305 Mannose-6-phosphate isomerase YPA_RS08535 IPR018050 Phosphomannose isomerase, type I, conserved site YPA_RS08540 IPR000362 Fumarate lyase family YPA_RS08540 IPR005677 Fumarate hydratase, class II YPA_RS08540 IPR008948 L-Aspartase-like YPA_RS08540 IPR018951 Fumarase C, C-terminal YPA_RS08540 IPR020557 Fumarate lyase, conserved site YPA_RS08540 IPR022761 Fumarate lyase, N-terminal YPA_RS08540 IPR024083 Fumarase/histidase, N-terminal YPA_RS08545 IPR008865 DNA replication terminus site-binding protein YPA_RS08555 IPR000847 Transcription regulator HTH, LysR YPA_RS08555 IPR005119 LysR, substrate-binding YPA_RS08555 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS08560 IPR000600 ROK YPA_RS08560 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS08565 IPR004472 Dethiobiotin synthase BioD YPA_RS08565 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS08575 IPR028082 Periplasmic binding protein-like I YPA_RS08580 IPR001270 ClpA/B family YPA_RS08580 IPR002611 IstB-like ATP-binding protein YPA_RS08580 IPR003593 AAA+ ATPase domain YPA_RS08580 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS08580 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS08585 IPR001584 Integrase, catalytic core YPA_RS08585 IPR006120 Resolvase, HTH domain YPA_RS08585 IPR009057 Homeodomain-like YPA_RS08585 IPR012337 Ribonuclease H-like domain YPA_RS08595 IPR000515 MetI-like domain YPA_RS08600 IPR000845 Nucleoside phosphorylase domain YPA_RS08600 IPR011271 AMP nucleosidase YPA_RS08600 IPR018017 Nucleoside phosphorylase YPA_RS08600 IPR018953 AMP nucleoside phosphorylase, N-terminal YPA_RS08610 IPR009216 Virulence factor SrfB YPA_RS08615 IPR017030 Virulence effector, SrfC YPA_RS08620 IPR010846 Protein of unknown function DUF1460 YPA_RS08620 IPR023360 Putative xylanase-like C-terminal YPA_RS08625 IPR000399 TPP-binding enzyme, conserved site YPA_RS08625 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YPA_RS08625 IPR012000 Thiamine pyrophosphate enzyme, central domain YPA_RS08625 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain YPA_RS08625 IPR012846 Acetolactate synthase, large subunit, biosynthetic YPA_RS08625 IPR029035 DHS-like NAD/FAD-binding domain YPA_RS08625 IPR029061 Thiamin diphosphate-binding fold YPA_RS08635 IPR006439 HAD hydrolase, subfamily IA YPA_RS08635 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB YPA_RS08635 IPR023198 Phosphoglycolate phosphatase, domain 2 YPA_RS08635 IPR023214 HAD-like domain YPA_RS08640 IPR028932 TerB-C domain YPA_RS08640 IPR029024 TerB-like YPA_RS08645 IPR025266 TerB, N-terminal YPA_RS08650 IPR001952 Alkaline phosphatase YPA_RS08650 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha YPA_RS08650 IPR017850 Alkaline-phosphatase-like, core domain YPA_RS08650 IPR018299 Alkaline phosphatase, active site YPA_RS08655 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site YPA_RS08655 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain YPA_RS08655 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS08655 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding YPA_RS08655 IPR023546 Methylated-DNA--protein-cysteine methyltransferase YPA_RS08660 IPR000595 Cyclic nucleotide-binding domain YPA_RS08660 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS08660 IPR012318 Helix-turn-helix motif, Crp-type YPA_RS08660 IPR014710 RmlC-like jelly roll fold YPA_RS08660 IPR018335 Transcription regulator HTH, Crp-type, conserved site YPA_RS08660 IPR018490 Cyclic nucleotide-binding-like YPA_RS08665 IPR006016 UspA YPA_RS08665 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPA_RS08670 IPR012136 NADP transhydrogenase, beta subunit YPA_RS08670 IPR029035 DHS-like NAD/FAD-binding domain YPA_RS08675 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain YPA_RS08675 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal YPA_RS08675 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 YPA_RS08675 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 YPA_RS08675 IPR016040 NAD(P)-binding domain YPA_RS08675 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal YPA_RS08675 IPR026255 NAD(P) transhydrogenase, alpha subunit YPA_RS08685 IPR010854 Domain of unknown function DUF1471 YPA_RS08685 IPR025539 YdgH protein YPA_RS08685 IPR025543 Dodecin-like YPA_RS08690 IPR002293 Amino acid/polyamine transporter I YPA_RS08690 IPR004754 Amino acid antiporter YPA_RS08700 IPR001789 Signal transduction response regulator, receiver domain YPA_RS08700 IPR001867 Signal transduction response regulator, C-terminal YPA_RS08700 IPR011006 CheY-like superfamily YPA_RS08700 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS08700 IPR016032 Signal transduction response regulator, C-terminal effector YPA_RS08705 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPA_RS08705 IPR003660 HAMP linker domain YPA_RS08705 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPA_RS08705 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPA_RS08710 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase YPA_RS08715 IPR002686 Transposase IS200-like YPA_RS08725 IPR005165 Anthrax toxin, edema factor, central YPA_RS08725 IPR022385 Rhs repeat-associated core YPA_RS08740 IPR007372 Lipid/polyisoprenoid-binding, YceI-like YPA_RS08745 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase YPA_RS08745 IPR016174 Di-haem cytochrome, transmembrane YPA_RS08760 IPR001254 Peptidase S1 YPA_RS08760 IPR001314 Peptidase S1A, chymotrypsin-type YPA_RS08760 IPR009003 Trypsin-like cysteine/serine peptidase domain YPA_RS08760 IPR018114 Peptidase S1, trypsin family, active site YPA_RS08760 IPR033116 YPA_RS08760 YPA_RS08765 IPR001387 Cro/C1-type helix-turn-helix domain YPA_RS08765 IPR010982 Lambda repressor-like, DNA-binding domain YPA_RS08770 IPR009241 Addiction module killer protein YPA_RS08775 IPR010222 RNA helicase, ATP-dependent DEAH box, HrpA-type YPA_RS08775 IPR011709 Domain of unknown function DUF1605 YPA_RS08775 IPR024590 RNA helicase, ATP-dependent DEAH box, HrpA, C-terminal YPA_RS08780 IPR001584 Integrase, catalytic core YPA_RS08780 IPR006120 Resolvase, HTH domain YPA_RS08780 IPR009057 Homeodomain-like YPA_RS08780 IPR012337 Ribonuclease H-like domain YPA_RS08785 IPR001270 ClpA/B family YPA_RS08785 IPR002611 IstB-like ATP-binding protein YPA_RS08785 IPR003593 AAA+ ATPase domain YPA_RS08785 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS08785 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS08790 IPR001650 Helicase, C-terminal YPA_RS08790 IPR003593 AAA+ ATPase domain YPA_RS08790 IPR007502 Helicase-associated domain YPA_RS08790 IPR010222 RNA helicase, ATP-dependent DEAH box, HrpA-type YPA_RS08790 IPR011545 DEAD/DEAH box helicase domain YPA_RS08790 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YPA_RS08790 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS08795 IPR003680 Flavodoxin-like fold YPA_RS08795 IPR023048 NADH-azoreductase, FMN-dependent YPA_RS08795 IPR029039 Flavoprotein-like YPA_RS08800 IPR007324 Sugar-binding domain, putative YPA_RS08805 IPR000669 Mannitol dehydrogenase YPA_RS08805 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YPA_RS08805 IPR013118 Mannitol dehydrogenase, C-terminal YPA_RS08805 IPR013131 Mannitol dehydrogenase, N-terminal YPA_RS08805 IPR013328 Dehydrogenase, multihelical YPA_RS08805 IPR016040 NAD(P)-binding domain YPA_RS08810 IPR008309 Uncharacterised conserved protein UCP025560 YPA_RS08815 IPR025985 YnbE-like lipoprotein YPA_RS08820 IPR021730 Dicarboxylate transport YPA_RS08825 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPA_RS08825 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain YPA_RS08825 IPR016040 NAD(P)-binding domain YPA_RS08825 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YPA_RS08825 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YPA_RS08830 IPR005184 Domain of unknown function DUF306, Meta/HslJ YPA_RS08835 IPR005590 Protein of unknown function DUF333 YPA_RS08840 IPR003416 MgtC/SapB/SrpB transporter YPA_RS08845 IPR000390 Small multidrug resistance protein family YPA_RS08850 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain YPA_RS08850 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal YPA_RS08850 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II YPA_RS08850 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YPA_RS08850 IPR011895 Pyruvate-flavodoxin oxidoreductase YPA_RS08850 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPA_RS08850 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPA_RS08850 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain YPA_RS08850 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain YPA_RS08850 IPR029061 Thiamin diphosphate-binding fold YPA_RS08850 IPR033412 YPA_RS08850 YPA_RS08855 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase YPA_RS08855 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA YPA_RS08855 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPA_RS08860 IPR013094 Alpha/beta hydrolase fold-3 YPA_RS08860 IPR029058 Alpha/Beta hydrolase fold YPA_RS08865 IPR000551 MerR-type HTH domain YPA_RS08865 IPR009061 DNA binding domain, putative YPA_RS08865 IPR011256 Regulatory factor, effector binding domain YPA_RS08870 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB YPA_RS08875 IPR000914 Bacterial extracellular solute-binding protein, family 5 YPA_RS08875 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site YPA_RS08875 IPR030678 YPA_RS08875 YPA_RS08880 IPR000834 Peptidase M14, carboxypeptidase A YPA_RS08885 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase YPA_RS08885 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain YPA_RS08885 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal YPA_RS08885 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site YPA_RS08885 IPR029017 Enolase N-terminal domain-like YPA_RS08885 IPR029065 Enolase C-terminal domain-like YPA_RS08890 IPR002065 Putative thiol peroxidase Tpx YPA_RS08890 IPR012336 Thioredoxin-like fold YPA_RS08890 IPR013740 Redoxin YPA_RS08890 IPR018219 Thiol peroxidase conserved site YPA_RS08895 IPR002686 Transposase IS200-like YPA_RS08900 IPR000014 PAS domain YPA_RS08900 IPR002078 RNA polymerase sigma factor 54 interaction domain YPA_RS08900 IPR003593 AAA+ ATPase domain YPA_RS08900 IPR009057 Homeodomain-like YPA_RS08900 IPR013767 PAS fold YPA_RS08900 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YPA_RS08900 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPA_RS08900 IPR025944 Sigma-54 interaction domain, conserved site YPA_RS08900 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS08900 IPR030828 YPA_RS08900 YPA_RS08905 IPR011979 Conserved hypothetical protein CHP02293 YPA_RS08905 IPR024467 Domain of unknown function DUF2384 YPA_RS08910 IPR014914 RES YPA_RS08915 IPR006507 Uncharacterised protein family UPF0283 YPA_RS08915 IPR021147 Protein of unknown function DUF697 YPA_RS08920 IPR007413 Protein of unknown function DUF463, YcjX-like protein YPA_RS08925 IPR014321 Phage shock protein, PspD YPA_RS08930 IPR007168 Phage shock protein, PspC, N-terminal YPA_RS08930 IPR014320 Phage shock protein, PspC YPA_RS08935 IPR009554 Phage shock protein, PspB YPA_RS08940 IPR007157 PspA/IM30 YPA_RS08940 IPR014319 Phage shock protein, PspA YPA_RS08945 IPR002078 RNA polymerase sigma factor 54 interaction domain YPA_RS08945 IPR002197 DNA binding HTH domain, Fis-type YPA_RS08945 IPR003593 AAA+ ATPase domain YPA_RS08945 IPR009057 Homeodomain-like YPA_RS08945 IPR014317 Transcription activator PspF YPA_RS08945 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPA_RS08945 IPR025944 Sigma-54 interaction domain, conserved site YPA_RS08945 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS08950 IPR002686 Transposase IS200-like YPA_RS08965 IPR000914 Bacterial extracellular solute-binding protein, family 5 YPA_RS08965 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site YPA_RS08965 IPR030678 YPA_RS08965 YPA_RS08970 IPR000515 MetI-like domain YPA_RS08975 IPR000515 MetI-like domain YPA_RS08975 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YPA_RS08980 IPR003439 ABC transporter-like YPA_RS08980 IPR003593 AAA+ ATPase domain YPA_RS08980 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YPA_RS08980 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS08985 IPR003439 ABC transporter-like YPA_RS08985 IPR003593 AAA+ ATPase domain YPA_RS08985 IPR017871 ABC transporter, conserved site YPA_RS08985 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS08990 IPR029032 AhpD-like YPA_RS08995 IPR000109 Proton-dependent oligopeptide transporter family YPA_RS08995 IPR005279 Amino acid/peptide transporter family YPA_RS08995 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site YPA_RS08995 IPR020846 Major facilitator superfamily domain YPA_RS08995 IPR023517 Amino acid/peptide transporter family, dipeptide and tripeptide permease A YPA_RS09000 IPR009698 Protein of unknown function DUF1282 YPA_RS09005 IPR020317 Uncharacterised protein family YjbD YPA_RS09010 IPR004046 Glutathione S-transferase, C-terminal YPA_RS09010 IPR010987 Glutathione S-transferase, C-terminal-like YPA_RS09015 IPR004625 Pyridoxal phosphate (active vitamin B6) biosynthesis, pyridoxal kinase YPA_RS09015 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase YPA_RS09015 IPR023685 Pyridoxal kinase PdxY YPA_RS09015 IPR029056 Ribokinase-like YPA_RS09020 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPA_RS09020 IPR002305 Aminoacyl-tRNA synthetase, class Ic YPA_RS09020 IPR002307 Tyrosine-tRNA ligase YPA_RS09020 IPR002942 RNA-binding S4 domain YPA_RS09020 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPA_RS09020 IPR024088 Tyrosine-tRNA ligase, bacterial-type YPA_RS09020 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 YPA_RS09025 IPR000659 Pyridoxamine 5'-phosphate oxidase YPA_RS09025 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain YPA_RS09025 IPR012349 FMN-binding split barrel YPA_RS09025 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal YPA_RS09025 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site YPA_RS09030 IPR018660 C-type lysozyme, inhibitor YPA_RS09035 IPR005338 Anhydro-N-acetylmuramic acid kinase YPA_RS09040 IPR008816 Glycine zipper 2TM domain YPA_RS09045 IPR000835 MarR-type HTH domain YPA_RS09045 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS09045 IPR023071 Transcriptional regulator, SlyA YPA_RS09045 IPR023187 Transcriptional regulator MarR-type, conserved site YPA_RS09050 IPR001395 Aldo/keto reductase YPA_RS09050 IPR020471 Aldo/keto reductase subgroup YPA_RS09050 IPR023210 NADP-dependent oxidoreductase domain YPA_RS09055 IPR010710 Protein of unknown function DUF1289 YPA_RS09060 IPR000917 Sulfatase YPA_RS09060 IPR012549 Domain of unknown function DUF1705 YPA_RS09060 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha YPA_RS09060 IPR017850 Alkaline-phosphatase-like, core domain YPA_RS09065 IPR001647 DNA-binding HTH domain, TetR-type YPA_RS09065 IPR009057 Homeodomain-like YPA_RS09065 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal YPA_RS09065 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal YPA_RS09070 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal YPA_RS09070 IPR013785 Aldolase-type TIM barrel YPA_RS09075 IPR022385 Rhs repeat-associated core YPA_RS09080 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain YPA_RS09080 IPR004361 Glyoxalase I YPA_RS09080 IPR018146 Glyoxalase I, conserved site YPA_RS09080 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase YPA_RS09085 IPR005987 Ribonuclease T YPA_RS09085 IPR012337 Ribonuclease H-like domain YPA_RS09085 IPR013520 Exonuclease, RNase T/DNA polymerase III YPA_RS09090 IPR002109 Glutaredoxin YPA_RS09090 IPR004480 Monothiol glutaredoxin-related YPA_RS09090 IPR012336 Thioredoxin-like fold YPA_RS09090 IPR014434 Monothiol glutaredoxin YPA_RS09100 IPR000064 Endopeptidase, NLPC/P60 domain YPA_RS09105 IPR001189 Manganese/iron superoxide dismutase YPA_RS09105 IPR019831 Manganese/iron superoxide dismutase, N-terminal YPA_RS09105 IPR019832 Manganese/iron superoxide dismutase, C-terminal YPA_RS09105 IPR019833 Manganese/iron superoxide dismutase, binding site YPA_RS09110 IPR000843 Transcription regulator HTH, LacI YPA_RS09110 IPR010982 Lambda repressor-like, DNA-binding domain YPA_RS09110 IPR023588 Transcription regulator HTH, PurR YPA_RS09110 IPR028082 Periplasmic binding protein-like I YPA_RS09115 IPR000847 Transcription regulator HTH, LysR YPA_RS09115 IPR005119 LysR, substrate-binding YPA_RS09115 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS09120 IPR004812 Drug resistance transporter Bcr/CmlA subfamily YPA_RS09120 IPR011701 Major facilitator superfamily YPA_RS09120 IPR020846 Major facilitator superfamily domain YPA_RS09125 IPR003333 Mycolic acid cyclopropane synthase YPA_RS09125 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPA_RS09130 IPR001783 Lumazine-binding protein YPA_RS09130 IPR017938 Riboflavin synthase-like beta-barrel YPA_RS09130 IPR023366 ATP synthase subunit alpha-like domain YPA_RS09130 IPR026017 Lumazine-binding domain YPA_RS09135 IPR002528 Multi antimicrobial extrusion protein YPA_RS09135 IPR022913 Multidrug resistance protein MdtK YPA_RS09150 IPR001697 Pyruvate kinase YPA_RS09150 IPR011037 Pyruvate kinase-like, insert domain YPA_RS09150 IPR015793 Pyruvate kinase, barrel YPA_RS09150 IPR015794 Pyruvate kinase, alpha/beta YPA_RS09150 IPR015795 Pyruvate kinase, C-terminal YPA_RS09150 IPR015806 Pyruvate kinase, beta-barrel insert domain YPA_RS09150 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain YPA_RS09150 IPR018209 Pyruvate kinase, active site YPA_RS09155 IPR006817 Lipoprotein leucine-zipper YPA_RS09155 IPR016367 Murein-lipoprotein YPA_RS09165 IPR001584 Integrase, catalytic core YPA_RS09165 IPR006120 Resolvase, HTH domain YPA_RS09165 IPR009057 Homeodomain-like YPA_RS09165 IPR012337 Ribonuclease H-like domain YPA_RS09170 IPR001270 ClpA/B family YPA_RS09170 IPR002611 IstB-like ATP-binding protein YPA_RS09170 IPR003593 AAA+ ATPase domain YPA_RS09170 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS09170 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS09175 IPR005490 L,D-transpeptidase catalytic domain YPA_RS09180 IPR003808 Fe-S metabolism associated domain, SufE-like YPA_RS09180 IPR023939 Cysteine desulfuration protein SufE YPA_RS09185 IPR000192 Aminotransferase class V domain YPA_RS09185 IPR010970 Cysteine desulfurase, SufS YPA_RS09185 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPA_RS09185 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPA_RS09185 IPR015424 Pyridoxal phosphate-dependent transferase YPA_RS09185 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site YPA_RS09190 IPR000825 SUF system FeS cluster assembly, SufBD YPA_RS09190 IPR011542 SUF system FeS cluster assembly, SufD YPA_RS09195 IPR003439 ABC transporter-like YPA_RS09195 IPR003593 AAA+ ATPase domain YPA_RS09195 IPR010230 FeS cluster assembly SUF system, ATPase SufC YPA_RS09195 IPR017871 ABC transporter, conserved site YPA_RS09195 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS09200 IPR000825 SUF system FeS cluster assembly, SufBD YPA_RS09200 IPR010231 SUF system FeS cluster assembly, SufB YPA_RS09205 IPR000361 FeS cluster biogenesis YPA_RS09205 IPR016092 FeS cluster insertion protein YPA_RS09205 IPR017870 FeS cluster insertion, C-terminal, conserved site YPA_RS09215 IPR003736 Phenylacetic acid degradation-related domain YPA_RS09215 IPR006683 Thioesterase superfamily YPA_RS09215 IPR029069 HotDog domain YPA_RS09215 IPR030863 YPA_RS09215 YPA_RS09220 IPR004113 FAD-linked oxidase, C-terminal YPA_RS09220 IPR006094 FAD linked oxidase, N-terminal YPA_RS09220 IPR009051 Alpha-helical ferredoxin YPA_RS09220 IPR016164 FAD-linked oxidase-like, C-terminal YPA_RS09220 IPR016166 FAD-binding, type 2 YPA_RS09220 IPR016167 FAD-binding, type 2, subdomain 1 YPA_RS09220 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 YPA_RS09220 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPA_RS09220 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPA_RS09225 IPR002549 Uncharacterised protein family UPF0118 YPA_RS09230 IPR000121 PEP-utilising enzyme, C-terminal YPA_RS09230 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding YPA_RS09230 IPR006319 Phosphoenolpyruvate synthase YPA_RS09230 IPR008279 PEP-utilising enzyme, mobile domain YPA_RS09230 IPR013815 ATP-grasp fold, subdomain 1 YPA_RS09230 IPR013816 ATP-grasp fold, subdomain 2 YPA_RS09230 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain YPA_RS09230 IPR018274 PEP-utilising enzyme, active site YPA_RS09230 IPR023151 PEP-utilising enzyme, conserved site YPA_RS09235 IPR005177 Bifunctional kinase-pyrophosphorylase YPA_RS09235 IPR008917 Transcription factor, Skn-1-like, DNA-binding domain YPA_RS09235 IPR026530 Phosphoenolpyruvate synthase regulatory protein YPA_RS09240 IPR006218 DAHP synthetase I/KDSA YPA_RS09240 IPR006219 DHAP synthase, class 1 YPA_RS09240 IPR013785 Aldolase-type TIM barrel YPA_RS09250 IPR004143 Biotin/lipoate A/B protein ligase YPA_RS09250 IPR004562 Lipoyltransferase/lipoate-protein ligase YPA_RS09250 IPR019491 Lipoate protein ligase, C-terminal YPA_RS09250 IPR023741 Lipoate-protein ligase A YPA_RS09255 IPR000064 Endopeptidase, NLPC/P60 domain YPA_RS09260 IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF YPA_RS09265 IPR000620 Drug/metabolite transporter YPA_RS09265 IPR022883 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE YPA_RS09270 IPR003342 Glycosyl transferase, family 39 YPA_RS09270 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase YPA_RS09275 IPR002509 Polysaccharide deacetylase YPA_RS09275 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YPA_RS09275 IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable YPA_RS09280 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain YPA_RS09280 IPR002376 Formyl transferase, N-terminal YPA_RS09280 IPR005793 Formyl transferase, C-terminal YPA_RS09280 IPR011034 Formyl transferase, C-terminal-like YPA_RS09280 IPR016040 NAD(P)-binding domain YPA_RS09280 IPR021168 Bifunctional polymyxin resistance protein, ArnA YPA_RS09285 IPR001173 Glycosyltransferase 2-like YPA_RS09285 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase YPA_RS09285 IPR029044 Nucleotide-diphospho-sugar transferases YPA_RS09290 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase YPA_RS09290 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPA_RS09290 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPA_RS09290 IPR015424 Pyridoxal phosphate-dependent transferase YPA_RS09290 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB YPA_RS09295 IPR003439 ABC transporter-like YPA_RS09295 IPR003593 AAA+ ATPase domain YPA_RS09295 IPR017871 ABC transporter, conserved site YPA_RS09295 IPR023693 ABC transporter, vitamin B12, BtuD YPA_RS09295 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS09300 IPR000889 Glutathione peroxidase YPA_RS09300 IPR012336 Thioredoxin-like fold YPA_RS09300 IPR029759 Glutathione peroxidase active site YPA_RS09305 IPR000522 ABC transporter, permease protein YPA_RS09305 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC YPA_RS09305 IPR029022 ABC transporter, BtuC-like YPA_RS09310 IPR019638 Protein of unknown function DUF2502 YPA_RS09315 IPR000119 Histone-like bacterial DNA-binding protein YPA_RS09315 IPR005684 Integration host factor, alpha subunit YPA_RS09315 IPR010992 Integration host factor (IHF)-like DNA-binding domain YPA_RS09315 IPR020816 Histone-like DNA-binding protein, conserved site YPA_RS09320 IPR002547 tRNA-binding domain YPA_RS09320 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit YPA_RS09320 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding YPA_RS09320 IPR005146 B3/B4 tRNA-binding domain YPA_RS09320 IPR005147 tRNA synthetase, B5-domain YPA_RS09320 IPR009061 DNA binding domain, putative YPA_RS09320 IPR012340 Nucleic acid-binding, OB-fold YPA_RS09320 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 YPA_RS09325 IPR002319 Phenylalanyl-tRNA synthetase YPA_RS09325 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal YPA_RS09325 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit YPA_RS09325 IPR010978 tRNA-binding arm YPA_RS09325 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial YPA_RS09330 IPR005813 Ribosomal protein L20 YPA_RS09335 IPR001706 Ribosomal protein L35, non-mitochondrial YPA_RS09335 IPR018265 Ribosomal protein L35, conserved site YPA_RS09335 IPR021137 Ribosomal protein L35 YPA_RS09340 IPR001288 Translation initiation factor 3 YPA_RS09340 IPR019815 Translation initiation factor 3, C-terminal YPA_RS09345 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain YPA_RS09345 IPR002320 Threonine-tRNA ligase, class IIa YPA_RS09345 IPR004095 TGS YPA_RS09345 IPR004154 Anticodon-binding YPA_RS09345 IPR012675 Beta-grasp domain YPA_RS09345 IPR012676 TGS-like YPA_RS09345 IPR012947 Threonyl/alanyl tRNA synthetase, SAD YPA_RS09345 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain YPA_RS09350 IPR025309 KTSC domain YPA_RS09365 IPR002771 Multiple antibiotic resistance (MarC)-related YPA_RS09370 IPR000189 Prokaryotic transglycosylase, active site YPA_RS09370 IPR008258 Lytic transglycosylase-like SLT domain YPA_RS09370 IPR023346 Lysozyme-like domain YPA_RS09375 IPR006127 Periplasmic solute binding protein family YPA_RS09375 IPR006128 Adhesion lipoprotein YPA_RS09375 IPR006129 Adhesin B YPA_RS09380 IPR003439 ABC transporter-like YPA_RS09380 IPR003593 AAA+ ATPase domain YPA_RS09380 IPR017871 ABC transporter, conserved site YPA_RS09380 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS09385 IPR001626 ABC-3 YPA_RS09385 IPR029022 ABC transporter, BtuC-like YPA_RS09390 IPR001626 ABC-3 YPA_RS09390 IPR029022 ABC transporter, BtuC-like YPA_RS09400 IPR011009 Protein kinase-like domain YPA_RS09400 IPR016477 Fructosamine/Ketosamine-3-kinase YPA_RS09405 IPR025229 YniB-like protein YPA_RS09410 IPR006439 HAD hydrolase, subfamily IA YPA_RS09410 IPR023198 Phosphoglycolate phosphatase, domain 2 YPA_RS09410 IPR023214 HAD-like domain YPA_RS09415 IPR001207 Transposase, mutator type YPA_RS09420 IPR011051 RmlC-like cupin domain YPA_RS09420 IPR013096 Cupin 2, conserved barrel YPA_RS09420 IPR014710 RmlC-like jelly roll fold YPA_RS09420 IPR025499 Pectin degradation protein KdgF YPA_RS09425 IPR007045 5-keto 4-deoxyuronate isomerase YPA_RS09425 IPR011051 RmlC-like cupin domain YPA_RS09425 IPR021120 KduI/IolB isomerase YPA_RS09425 IPR027447 5-keto-4-deoxyuronate isomerase, C-terminal domain YPA_RS09425 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal domain YPA_RS09430 IPR002347 Glucose/ribitol dehydrogenase YPA_RS09430 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase YPA_RS09430 IPR016040 NAD(P)-binding domain YPA_RS09430 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPA_RS09435 IPR010702 Periplasmic pectate lyase YPA_RS09440 IPR001270 ClpA/B family YPA_RS09440 IPR002611 IstB-like ATP-binding protein YPA_RS09440 IPR003593 AAA+ ATPase domain YPA_RS09440 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS09440 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS09445 IPR001584 Integrase, catalytic core YPA_RS09445 IPR006120 Resolvase, HTH domain YPA_RS09445 IPR009057 Homeodomain-like YPA_RS09445 IPR012337 Ribonuclease H-like domain YPA_RS09450 IPR010702 Periplasmic pectate lyase YPA_RS09455 IPR000515 MetI-like domain YPA_RS09460 IPR000515 MetI-like domain YPA_RS09465 IPR003439 ABC transporter-like YPA_RS09465 IPR003593 AAA+ ATPase domain YPA_RS09465 IPR008995 Molybdate/tungstate binding, C-terminal YPA_RS09465 IPR017871 ABC transporter, conserved site YPA_RS09465 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS09470 IPR006059 Bacterial extracellular solute-binding, family 1 YPA_RS09475 IPR009331 Oligogalacturonate-specific porin YPA_RS09480 IPR007404 Protein of unknown function DUF457 YPA_RS09480 IPR016956 LexA regulated metal-dependent membrane hydrolase, predicted YPA_RS09485 IPR001991 Sodium:dicarboxylate symporter YPA_RS09490 IPR002477 Peptidoglycan binding-like YPA_RS09490 IPR002502 N-acetylmuramoyl-L-alanine amidase domain YPA_RS09495 IPR005471 Transcription regulator IclR, N-terminal YPA_RS09495 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS09495 IPR014757 Transcription regulator IclR, C-terminal YPA_RS09495 IPR029016 GAF domain-like YPA_RS09500 IPR015943 WD40/YVTN repeat-like-containing domain YPA_RS09500 IPR027946 Oligogalacturonate lyase domain YPA_RS09505 IPR011701 Major facilitator superfamily YPA_RS09505 IPR020846 Major facilitator superfamily domain YPA_RS09510 IPR001829 Pili assembly chaperone, bacterial YPA_RS09510 IPR008962 PapD-like YPA_RS09510 IPR016147 PapD, N-terminal, bacterial YPA_RS09510 IPR016148 Pili assembly chaperone, C-terminal domain YPA_RS09510 IPR018046 Pili assembly chaperone, conserved site YPA_RS09520 IPR000015 Outer membrane usher protein YPA_RS09520 IPR018030 Fimbrial membrane usher, conserved site YPA_RS09520 IPR025885 PapC, N-terminal domain YPA_RS09520 IPR025949 PapC-like, C-terminal domain YPA_RS09525 IPR001829 Pili assembly chaperone, bacterial YPA_RS09525 IPR008962 PapD-like YPA_RS09525 IPR016147 PapD, N-terminal, bacterial YPA_RS09525 IPR016148 Pili assembly chaperone, C-terminal domain YPA_RS09525 IPR018046 Pili assembly chaperone, conserved site YPA_RS09530 IPR000259 Fimbrial-type adhesion domain YPA_RS09530 IPR008966 Adhesion domain YPA_RS09535 IPR001915 Peptidase M48 YPA_RS09535 IPR022919 Peptidase M48, protease HtpX, putative YPA_RS09540 IPR001478 PDZ domain YPA_RS09540 IPR004447 C-terminal-processing peptidase S41A YPA_RS09540 IPR005151 Tail specific protease YPA_RS09540 IPR020992 Tail specific protease, C-terminal YPA_RS09540 IPR029045 ClpP/crotonase-like domain YPA_RS09545 IPR016103 ProQ/FinO domain YPA_RS09545 IPR023529 Transporter ProP effector, ProQ YPA_RS09550 IPR003018 GAF domain YPA_RS09550 IPR029016 GAF domain-like YPA_RS09555 IPR005219 Conserved hypothetical protein CHP00155 YPA_RS09555 IPR007498 Paraquat-inducible protein A YPA_RS09560 IPR003399 Mammalian cell entry-related YPA_RS09565 IPR007893 Spore coat protein U YPA_RS09570 IPR007893 Spore coat protein U YPA_RS09575 IPR007893 Spore coat protein U YPA_RS09580 IPR008962 PapD-like YPA_RS09580 IPR016147 PapD, N-terminal, bacterial YPA_RS09585 IPR000015 Outer membrane usher protein YPA_RS09585 IPR025949 PapC-like, C-terminal domain YPA_RS09590 IPR007893 Spore coat protein U YPA_RS09595 IPR009950 Protein of unknown function DUF1480 YPA_RS09605 IPR001584 Integrase, catalytic core YPA_RS09605 IPR006120 Resolvase, HTH domain YPA_RS09605 IPR009057 Homeodomain-like YPA_RS09605 IPR012337 Ribonuclease H-like domain YPA_RS09610 IPR001270 ClpA/B family YPA_RS09610 IPR002611 IstB-like ATP-binding protein YPA_RS09610 IPR003593 AAA+ ATPase domain YPA_RS09610 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS09610 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS09620 IPR002641 Patatin/Phospholipase A2-related YPA_RS09620 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase YPA_RS09635 IPR000821 Alanine racemase YPA_RS09635 IPR001608 Alanine racemase, N-terminal YPA_RS09635 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal YPA_RS09635 IPR011079 Alanine racemase, C-terminal YPA_RS09635 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site YPA_RS09635 IPR029066 PLP-binding barrel YPA_RS09645 IPR005594 YadA-like, C-terminal YPA_RS09645 IPR008635 Coiled stalk of trimeric autotransporter adhesin YPA_RS09645 IPR011049 Serralysin-like metalloprotease, C-terminal YPA_RS09650 IPR008635 Coiled stalk of trimeric autotransporter adhesin YPA_RS09650 IPR008640 Head domain of trimeric autotransporter adhesin YPA_RS09650 IPR011049 Serralysin-like metalloprotease, C-terminal YPA_RS09655 IPR002477 Peptidoglycan binding-like YPA_RS09655 IPR002502 N-acetylmuramoyl-L-alanine amidase domain YPA_RS09665 IPR007439 Chemotaxis phosphatase, CheZ YPA_RS09670 IPR001789 Signal transduction response regulator, receiver domain YPA_RS09670 IPR011006 CheY-like superfamily YPA_RS09675 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase YPA_RS09675 IPR001789 Signal transduction response regulator, receiver domain YPA_RS09675 IPR008248 Signal transduction response regulator, chemotaxis, CheB YPA_RS09675 IPR011006 CheY-like superfamily YPA_RS09680 IPR000780 MCP methyltransferase, CheR-type YPA_RS09680 IPR022641 MCP methyltransferase, CheR-type, all-alpha domain, N-terminal YPA_RS09680 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal YPA_RS09680 IPR026024 Chemotaxis protein methyltransferase CheR YPA_RS09680 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPA_RS09685 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding YPA_RS09685 IPR003660 HAMP linker domain YPA_RS09685 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YPA_RS09685 IPR004090 Chemotaxis methyl-accepting receptor YPA_RS09685 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site YPA_RS09690 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding YPA_RS09690 IPR003660 HAMP linker domain YPA_RS09690 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YPA_RS09690 IPR004090 Chemotaxis methyl-accepting receptor YPA_RS09690 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site YPA_RS09700 IPR019286 Protein of unknown function DUF2339, transmembrane YPA_RS09705 IPR005546 Autotransporter beta-domain YPA_RS09705 IPR006315 Outer membrane autotransporter barrel YPA_RS09705 IPR011050 Pectin lyase fold/virulence factor YPA_RS09705 IPR012332 P22 tailspike C-terminal domain-like YPA_RS09710 IPR013559 YheO-like YPA_RS09715 IPR013022 Xylose isomerase-like, TIM barrel domain YPA_RS09720 IPR006056 Enamine/imine deaminase YjgF-like YPA_RS09720 IPR006175 YjgF/Yer057p/UK114 family YPA_RS09720 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like YPA_RS09725 IPR011701 Major facilitator superfamily YPA_RS09725 IPR020846 Major facilitator superfamily domain YPA_RS09730 IPR002545 CheW-like protein YPA_RS09735 IPR002545 CheW-like protein YPA_RS09735 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPA_RS09735 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPA_RS09735 IPR004105 Histidine kinase CheA-like, homodimeric domain YPA_RS09735 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPA_RS09735 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain YPA_RS09735 IPR015162 CheY binding YPA_RS09740 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal YPA_RS09740 IPR025713 Motility protein B, N-terminal domain YPA_RS09745 IPR000540 Flagellar motor protein MotA, conserved site YPA_RS09745 IPR002898 MotA/TolQ/ExbB proton channel YPA_RS09745 IPR022522 Flagellar motor stator, MotA YPA_RS09750 IPR007944 Flagellar transcriptional activator FlhC YPA_RS09760 IPR001757 Cation-transporting P-type ATPase YPA_RS09760 IPR004014 Cation-transporting P-type ATPase, N-terminal YPA_RS09760 IPR006068 Cation-transporting P-type ATPase, C-terminal YPA_RS09760 IPR006415 Magnesium-transporting P-type ATPase, subfamily IIIB YPA_RS09760 IPR008250 P-type ATPase, A domain YPA_RS09760 IPR018303 P-type ATPase, phosphorylation site YPA_RS09760 IPR023214 HAD-like domain YPA_RS09760 IPR023298 P-type ATPase, transmembrane domain YPA_RS09760 IPR023299 P-type ATPase, cytoplasmic domain N YPA_RS09765 IPR003416 MgtC/SapB/SrpB transporter YPA_RS09780 IPR019717 Dextransucrase DSRB YPA_RS09785 IPR002059 Cold-shock protein, DNA-binding YPA_RS09785 IPR011129 Cold shock protein YPA_RS09785 IPR012156 Cold shock, CspA YPA_RS09785 IPR012340 Nucleic acid-binding, OB-fold YPA_RS09785 IPR019844 Cold-shock conserved site YPA_RS09790 IPR001270 ClpA/B family YPA_RS09790 IPR002611 IstB-like ATP-binding protein YPA_RS09790 IPR003593 AAA+ ATPase domain YPA_RS09790 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS09790 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS09795 IPR001584 Integrase, catalytic core YPA_RS09795 IPR006120 Resolvase, HTH domain YPA_RS09795 IPR009057 Homeodomain-like YPA_RS09795 IPR012337 Ribonuclease H-like domain YPA_RS09800 IPR004199 Beta galactosidase small chain/ domain 5 YPA_RS09800 IPR006101 Glycoside hydrolase, family 2 YPA_RS09800 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich YPA_RS09800 IPR006103 Glycoside hydrolase, family 2, TIM barrel YPA_RS09800 IPR006104 Glycosyl hydrolases family 2, sugar binding domain YPA_RS09800 IPR008979 Galactose-binding domain-like YPA_RS09800 IPR011013 Galactose mutarotase-like domain YPA_RS09800 IPR013781 Glycoside hydrolase, catalytic domain YPA_RS09800 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain YPA_RS09800 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup YPA_RS09800 IPR017853 Glycoside hydrolase, superfamily YPA_RS09800 IPR023230 Glycoside hydrolase, family 2, conserved site YPA_RS09800 IPR023232 Glycoside hydrolase, family 2, active site YPA_RS09800 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase YPA_RS09800 IPR032312 YPA_RS09800 YPA_RS09805 IPR002085 Alcohol dehydrogenase superfamily, zinc-type YPA_RS09805 IPR011032 GroES (chaperonin 10)-like YPA_RS09805 IPR013149 Alcohol dehydrogenase, C-terminal YPA_RS09805 IPR013154 Alcohol dehydrogenase GroES-like YPA_RS09805 IPR014189 Quinone oxidoreductase PIG3 YPA_RS09805 IPR016040 NAD(P)-binding domain YPA_RS09805 IPR020843 Polyketide synthase, enoylreductase YPA_RS09810 IPR019713 Inner membrane protein YlaC YPA_RS09815 IPR000485 AsnC-type HTH domain YPA_RS09815 IPR011008 Dimeric alpha-beta barrel YPA_RS09815 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS09815 IPR019887 Transcription regulator AsnC-type, C-terminal YPA_RS09815 IPR019888 Transcription regulator AsnC-type YPA_RS09820 IPR021266 Kdo hydroxylase YPA_RS09825 IPR017704 Putative selenium-binding protein YdfZ YPA_RS09830 IPR000560 Histidine phosphatase superfamily, clade-2 YPA_RS09830 IPR029033 Histidine phosphatase superfamily YPA_RS09830 IPR033379 YPA_RS09830 YPA_RS09840 IPR002577 Helix-turn-helix, HxlR type YPA_RS09840 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS09845 IPR008030 NmrA-like domain YPA_RS09845 IPR016040 NAD(P)-binding domain YPA_RS09850 IPR000014 PAS domain YPA_RS09850 IPR001610 PAC motif YPA_RS09850 IPR003660 HAMP linker domain YPA_RS09850 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YPA_RS09850 IPR004090 Chemotaxis methyl-accepting receptor YPA_RS09850 IPR013655 PAS fold-3 YPA_RS09860 IPR000843 Transcription regulator HTH, LacI YPA_RS09860 IPR001761 Periplasmic binding protein/LacI sugar binding domain YPA_RS09860 IPR010982 Lambda repressor-like, DNA-binding domain YPA_RS09860 IPR028082 Periplasmic binding protein-like I YPA_RS09865 IPR001804 Isocitrate and isopropylmalate dehydrogenases family YPA_RS09865 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic YPA_RS09865 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site YPA_RS09865 IPR024084 Isopropylmalate dehydrogenase-like domain YPA_RS09870 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F YPA_RS09870 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F YPA_RS09870 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site YPA_RS09870 IPR020103 Pseudouridine synthase, catalytic domain YPA_RS09875 IPR000086 NUDIX hydrolase domain YPA_RS09875 IPR015797 NUDIX hydrolase domain-like YPA_RS09875 IPR020084 NUDIX hydrolase, conserved site YPA_RS09875 IPR020476 NUDIX hydrolase YPA_RS09880 IPR004506 tRNA-specific 2-thiouridylase YPA_RS09880 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPA_RS09880 IPR023382 Adenine nucleotide alpha hydrolase-like domains YPA_RS09885 IPR007451 Uncharacterised protein family UPF0274 YPA_RS09890 IPR000362 Fumarate lyase family YPA_RS09890 IPR004769 Adenylosuccinate lyase YPA_RS09890 IPR008948 L-Aspartase-like YPA_RS09890 IPR013539 Adenylosuccinate lyase PurB, C-terminal YPA_RS09890 IPR020557 Fumarate lyase, conserved site YPA_RS09890 IPR022761 Fumarate lyase, N-terminal YPA_RS09890 IPR024083 Fumarase/histidase, N-terminal YPA_RS09895 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel YPA_RS09895 IPR027385 Outer membrane protein beta-barrel YPA_RS09900 IPR001789 Signal transduction response regulator, receiver domain YPA_RS09900 IPR001867 Signal transduction response regulator, C-terminal YPA_RS09900 IPR011006 CheY-like superfamily YPA_RS09900 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS09905 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPA_RS09905 IPR003660 HAMP linker domain YPA_RS09905 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPA_RS09905 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPA_RS09905 IPR015014 PhoQ Sensor YPA_RS09910 IPR003347 JmjC domain YPA_RS09915 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site YPA_RS09915 IPR002933 Peptidase M20 YPA_RS09915 IPR010161 Peptidase M20B, tripeptide aminopeptidase YPA_RS09915 IPR011650 Peptidase M20, dimerisation domain YPA_RS09920 IPR003000 Sirtuin family YPA_RS09920 IPR026591 Sirtuin family, catalytic core small domain YPA_RS09920 IPR027546 Sirtuin, class III YPA_RS09920 IPR029035 DHS-like NAD/FAD-binding domain YPA_RS09925 IPR000600 ROK YPA_RS09930 IPR003838 Permease FtsX-like YPA_RS09930 IPR011925 Lipoprotein releasing system, transmembrane protein, LolC/E family YPA_RS09930 IPR011926 Lipoprotein releasing system, transmembrane protein LolE YPA_RS09930 IPR025857 MacB-like periplasmic core domain YPA_RS09935 IPR003439 ABC transporter-like YPA_RS09935 IPR003593 AAA+ ATPase domain YPA_RS09935 IPR011924 Lipoprotein releasing system, ATP-binding protein YPA_RS09935 IPR017871 ABC transporter, conserved site YPA_RS09935 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS09940 IPR003838 Permease FtsX-like YPA_RS09940 IPR011925 Lipoprotein releasing system, transmembrane protein, LolC/E family YPA_RS09940 IPR025857 MacB-like periplasmic core domain YPA_RS09945 IPR001650 Helicase, C-terminal YPA_RS09945 IPR003711 CarD-like/TRCF domain YPA_RS09945 IPR004576 Transcription-repair coupling factor YPA_RS09945 IPR005118 Transcription-repair-coupling factor, C-terminal domain YPA_RS09945 IPR011545 DEAD/DEAH box helicase domain YPA_RS09945 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YPA_RS09945 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS09950 IPR008816 Glycine zipper 2TM domain YPA_RS09955 IPR001207 Transposase, mutator type YPA_RS09970 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPA_RS09975 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA YPA_RS09975 IPR022987 Uncharacterised protein family UPF0227 YPA_RS09975 IPR029058 Alpha/Beta hydrolase fold YPA_RS09980 IPR001764 Glycoside hydrolase, family 3, N-terminal YPA_RS09980 IPR017853 Glycoside hydrolase, superfamily YPA_RS09980 IPR019800 Glycoside hydrolase, family 3, active site YPA_RS09980 IPR022956 Beta-hexosaminidase, bacterial YPA_RS09985 IPR002575 Aminoglycoside phosphotransferase YPA_RS09985 IPR011009 Protein kinase-like domain YPA_RS09985 IPR014093 Thiamine kinase YPA_RS09990 IPR014094 Penicillin-binding protein activator LpoB YPA_RS09995 IPR010824 Protein of unknown function DUF1425 YPA_RS10000 IPR001310 Histidine triad (HIT) protein YPA_RS10000 IPR011146 HIT-like domain YPA_RS10000 IPR019808 Histidine triad, conserved site YPA_RS10005 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal YPA_RS10005 IPR016040 NAD(P)-binding domain YPA_RS10010 IPR001270 ClpA/B family YPA_RS10010 IPR002611 IstB-like ATP-binding protein YPA_RS10010 IPR003593 AAA+ ATPase domain YPA_RS10010 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS10010 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS10015 IPR001584 Integrase, catalytic core YPA_RS10015 IPR006120 Resolvase, HTH domain YPA_RS10015 IPR009057 Homeodomain-like YPA_RS10015 IPR012337 Ribonuclease H-like domain YPA_RS10020 IPR002686 Transposase IS200-like YPA_RS10025 IPR001996 Phosphotransferase system, IIB component, type 1 YPA_RS10025 IPR003352 Phosphotransferase system, EIIC YPA_RS10025 IPR011299 PTS system glucose-specific IIBC component YPA_RS10025 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site YPA_RS10030 IPR001130 TatD family YPA_RS10030 IPR015991 Uncharacterised deoxyribonuclease TatD-type YPA_RS10030 IPR018228 Deoxyribonuclease, TatD-related, conserved site YPA_RS10030 IPR032466 YPA_RS10030 YPA_RS10035 IPR004622 DNA polymerase III, delta prime subunit YPA_RS10035 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal YPA_RS10035 IPR015199 DNA polymerase III, delta subunit, C-terminal YPA_RS10035 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS10040 IPR018094 Thymidylate kinase YPA_RS10040 IPR018095 Thymidylate kinase, conserved site YPA_RS10040 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS10045 IPR003770 Uncharacterised protein family UPF0755, YceG-like YPA_RS10045 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain YPA_RS10050 IPR001544 Aminotransferase, class IV YPA_RS10050 IPR017824 Aminodeoxychorismate lyase, class IV YPA_RS10050 IPR018300 Aminotransferase, class IV, conserved site YPA_RS10055 IPR002686 Transposase IS200-like YPA_RS10060 IPR014030 Beta-ketoacyl synthase, N-terminal YPA_RS10060 IPR014031 Beta-ketoacyl synthase, C-terminal YPA_RS10060 IPR016039 Thiolase-like YPA_RS10060 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 YPA_RS10060 IPR018201 Beta-ketoacyl synthase, active site YPA_RS10060 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPA_RS10065 IPR003231 Acyl carrier protein (ACP) YPA_RS10065 IPR006162 Phosphopantetheine attachment site YPA_RS10065 IPR009081 Acyl carrier protein-like YPA_RS10070 IPR002347 Glucose/ribitol dehydrogenase YPA_RS10070 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase YPA_RS10070 IPR016040 NAD(P)-binding domain YPA_RS10070 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPA_RS10075 IPR001227 Acyl transferase domain YPA_RS10075 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type YPA_RS10075 IPR014043 Acyl transferase YPA_RS10075 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase YPA_RS10075 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding YPA_RS10075 IPR020801 Polyketide synthase, acyl transferase domain YPA_RS10075 IPR024925 Malonyl CoA-acyl carrier protein transacylase YPA_RS10080 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 YPA_RS10080 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal YPA_RS10080 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YPA_RS10080 IPR016039 Thiolase-like YPA_RS10085 IPR003664 Fatty acid synthesis PlsX protein YPA_RS10085 IPR012281 Phospholipid biosynthesis protein, PlsX-like YPA_RS10085 IPR024084 Isopropylmalate dehydrogenase-like domain YPA_RS10090 IPR002677 Ribosomal protein L32p YPA_RS10090 IPR011332 Zinc-binding ribosomal protein YPA_RS10095 IPR003772 Protein of unknown function DUF177 YPA_RS10100 IPR003697 Maf-like protein YPA_RS10100 IPR029001 Inosine triphosphate pyrophosphatase-like YPA_RS10105 IPR002686 Transposase IS200-like YPA_RS10110 IPR002942 RNA-binding S4 domain YPA_RS10110 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F YPA_RS10110 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site YPA_RS10110 IPR006225 Pseudouridine synthase, RluC/RluD YPA_RS10110 IPR020103 Pseudouridine synthase, catalytic domain YPA_RS10115 IPR003029 Ribosomal protein S1, RNA-binding domain YPA_RS10115 IPR004659 Ribonuclease E/G YPA_RS10115 IPR012340 Nucleic acid-binding, OB-fold YPA_RS10115 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G YPA_RS10115 IPR021968 Polyribonucleotide phosphorylase C-terminal YPA_RS10115 IPR022967 RNA-binding domain, S1 YPA_RS10115 IPR028878 Ribonuclease E YPA_RS10125 IPR001207 Transposase, mutator type YPA_RS10130 IPR007138 Antibiotic biosynthesis monooxygenase-like domain YPA_RS10130 IPR011008 Dimeric alpha-beta barrel YPA_RS10135 IPR002195 Dihydroorotase, conserved site YPA_RS10135 IPR004721 Dihydroorotase homodimeric type YPA_RS10135 IPR006680 Amidohydrolase 1 YPA_RS10135 IPR032466 YPA_RS10135 YPA_RS10140 IPR010391 DNA damage-inducible protein DinI-like YPA_RS10150 IPR025730 Biofilm regulator BssS YPA_RS10160 IPR006076 FAD dependent oxidoreductase YPA_RS10160 IPR023493 N-methyl-L-tryptophan oxidase MTOX YPA_RS10160 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPA_RS10165 IPR001207 Transposase, mutator type YPA_RS10170 IPR000792 Transcription regulator LuxR, C-terminal YPA_RS10170 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS10170 IPR016032 Signal transduction response regulator, C-terminal effector YPA_RS10175 IPR002549 Uncharacterised protein family UPF0118 YPA_RS10200 IPR000620 Drug/metabolite transporter YPA_RS10205 IPR001690 Autoinducer synthesis protein YPA_RS10205 IPR016181 Acyl-CoA N-acyltransferase YPA_RS10205 IPR018311 Autoinducer synthesis, conserved site YPA_RS10210 IPR000792 Transcription regulator LuxR, C-terminal YPA_RS10210 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain YPA_RS10210 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS10210 IPR016032 Signal transduction response regulator, C-terminal effector YPA_RS10215 IPR000847 Transcription regulator HTH, LysR YPA_RS10215 IPR005119 LysR, substrate-binding YPA_RS10215 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS10225 IPR005828 General substrate transporter YPA_RS10225 IPR005829 Sugar transporter, conserved site YPA_RS10225 IPR020846 Major facilitator superfamily domain YPA_RS10230 IPR014826 Formaldehyde-activating enzyme YPA_RS10230 IPR020568 Ribosomal protein S5 domain 2-type fold YPA_RS10235 IPR001395 Aldo/keto reductase YPA_RS10235 IPR023210 NADP-dependent oxidoreductase domain YPA_RS10240 IPR013396 CRISPR-associated protein Csy4 YPA_RS10245 IPR013399 CRISPR-associated protein Csy3 YPA_RS10250 IPR013398 CRISPR-associated protein Csy2 YPA_RS10255 IPR013397 CRISPR-associated protein Csy1 YPA_RS10260 IPR013395 Helicase Cas3, CRISPR-associated, Yersinia-type YPA_RS10260 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS10265 IPR002729 CRISPR-associated protein Cas1 YPA_RS10265 IPR019857 CRISPR-associated protein Cas1, YPEST subtype YPA_RS10270 IPR006685 Mechanosensitive ion channel MscS YPA_RS10270 IPR010920 Like-Sm (LSM) domain YPA_RS10270 IPR030192 YPA_RS10270 YPA_RS10280 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel YPA_RS10285 IPR015045 Protein of unknown function DUF1861 YPA_RS10285 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain YPA_RS10290 IPR007184 Mannoside phosphorylase YPA_RS10290 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain YPA_RS10295 IPR000515 MetI-like domain YPA_RS10300 IPR000515 MetI-like domain YPA_RS10310 IPR000843 Transcription regulator HTH, LacI YPA_RS10310 IPR010982 Lambda repressor-like, DNA-binding domain YPA_RS10310 IPR028082 Periplasmic binding protein-like I YPA_RS10315 IPR005841 Alpha-D-phosphohexomutase superfamily YPA_RS10315 IPR005843 Alpha-D-phosphohexomutase, C-terminal YPA_RS10315 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I YPA_RS10315 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II YPA_RS10315 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III YPA_RS10315 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III YPA_RS10315 IPR016066 Alpha-D-phosphohexomutase, conserved site YPA_RS10320 IPR003439 ABC transporter-like YPA_RS10320 IPR003593 AAA+ ATPase domain YPA_RS10320 IPR008995 Molybdate/tungstate binding, C-terminal YPA_RS10320 IPR012340 Nucleic acid-binding, OB-fold YPA_RS10320 IPR013611 Transport-associated OB, type 2 YPA_RS10320 IPR017871 ABC transporter, conserved site YPA_RS10320 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS10335 IPR025459 Protein of unknown function DUF4279 YPA_RS10350 IPR006914 VENN motif-containing domain YPA_RS10365 IPR016630 Uncharacterised conserved protein UCP015278 YPA_RS10370 IPR006914 VENN motif-containing domain YPA_RS10370 IPR008619 Filamentous haemagglutinin repeat YPA_RS10370 IPR008638 Filamentous haemagglutinin, N-terminal YPA_RS10370 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPA_RS10370 IPR011050 Pectin lyase fold/virulence factor YPA_RS10370 IPR012334 Pectin lyase fold YPA_RS10370 IPR024973 ESPR domain YPA_RS10370 IPR025157 Haemagluttinin repeat YPA_RS10375 IPR005565 Haemolysin activator HlyB YPA_RS10375 IPR013686 Polypeptide-transport-associated, ShlB-type YPA_RS10375 IPR027282 Two partner secretion pathway transporter YPA_RS10380 IPR000951 Phthalate dioxygenase reductase YPA_RS10380 IPR001041 2Fe-2S ferredoxin-type domain YPA_RS10380 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPA_RS10380 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site YPA_RS10380 IPR008333 Oxidoreductase, FAD-binding domain YPA_RS10380 IPR012675 Beta-grasp domain YPA_RS10380 IPR017938 Riboflavin synthase-like beta-barrel YPA_RS10385 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit YPA_RS10385 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain YPA_RS10385 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site YPA_RS10385 IPR017941 Rieske [2Fe-2S] iron-sulphur domain YPA_RS10390 IPR000060 BCCT transporter family YPA_RS10390 IPR018093 BCCT transporter, conserved site YPA_RS10400 IPR001804 Isocitrate and isopropylmalate dehydrogenases family YPA_RS10400 IPR011829 Tartrate dehydrogenase YPA_RS10400 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site YPA_RS10400 IPR024084 Isopropylmalate dehydrogenase-like domain YPA_RS10405 IPR000847 Transcription regulator HTH, LysR YPA_RS10405 IPR005119 LysR, substrate-binding YPA_RS10405 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS10410 IPR000843 Transcription regulator HTH, LacI YPA_RS10410 IPR010982 Lambda repressor-like, DNA-binding domain YPA_RS10410 IPR025997 Periplasmic binding protein domain YPA_RS10410 IPR028082 Periplasmic binding protein-like I YPA_RS10415 IPR001851 ABC transporter, permease YPA_RS10420 IPR003439 ABC transporter-like YPA_RS10420 IPR003593 AAA+ ATPase domain YPA_RS10420 IPR017871 ABC transporter, conserved site YPA_RS10420 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS10425 IPR025997 Periplasmic binding protein domain YPA_RS10425 IPR028082 Periplasmic binding protein-like I YPA_RS10430 IPR002085 Alcohol dehydrogenase superfamily, zinc-type YPA_RS10430 IPR011032 GroES (chaperonin 10)-like YPA_RS10430 IPR013149 Alcohol dehydrogenase, C-terminal YPA_RS10430 IPR016040 NAD(P)-binding domain YPA_RS10435 IPR000620 Drug/metabolite transporter YPA_RS10440 IPR000182 GNAT domain YPA_RS10440 IPR016181 Acyl-CoA N-acyltransferase YPA_RS10445 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal YPA_RS10445 IPR023506 Trans-aconitate 2-methyltransferase YPA_RS10445 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPA_RS10450 IPR002177 DNA-binding protein Dps YPA_RS10450 IPR008331 Ferritin/DPS protein domain YPA_RS10450 IPR009078 Ferritin-like superfamily YPA_RS10450 IPR012347 Ferritin-related YPA_RS10450 IPR023067 DNA protection during starvation protein, gammaproteobacteria YPA_RS10450 IPR023188 DNA-binding protein Dps, conserved site YPA_RS10455 IPR003848 Domain of unknown function DUF218 YPA_RS10455 IPR011990 Tetratricopeptide-like helical domain YPA_RS10455 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPA_RS10460 IPR001320 Ionotropic glutamate receptor YPA_RS10460 IPR001638 Extracellular solute-binding protein, family 3 YPA_RS10460 IPR018313 Extracellular solute-binding protein, family 3, conserved site YPA_RS10465 IPR000515 MetI-like domain YPA_RS10465 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family YPA_RS10470 IPR003439 ABC transporter-like YPA_RS10470 IPR003593 AAA+ ATPase domain YPA_RS10470 IPR017871 ABC transporter, conserved site YPA_RS10470 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS10470 IPR030679 YPA_RS10470 YPA_RS10475 IPR000014 PAS domain YPA_RS10475 IPR001610 PAC motif YPA_RS10475 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YPA_RS10475 IPR004090 Chemotaxis methyl-accepting receptor YPA_RS10475 IPR013656 PAS fold-4 YPA_RS10480 IPR001584 Integrase, catalytic core YPA_RS10480 IPR006120 Resolvase, HTH domain YPA_RS10480 IPR009057 Homeodomain-like YPA_RS10480 IPR012337 Ribonuclease H-like domain YPA_RS10485 IPR001270 ClpA/B family YPA_RS10485 IPR002611 IstB-like ATP-binding protein YPA_RS10485 IPR003593 AAA+ ATPase domain YPA_RS10485 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS10485 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS10495 IPR010286 Ribosomal RNA large subunit methyltransferase F-like YPA_RS10495 IPR016909 Ribosomal RNA large subunit methyltransferase F YPA_RS10495 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPA_RS10500 IPR010854 Domain of unknown function DUF1471 YPA_RS10500 IPR025543 Dodecin-like YPA_RS10505 IPR000312 Glycosyl transferase, family 3 YPA_RS10505 IPR017459 Glycosyl transferase family 3, N-terminal domain YPA_RS10510 IPR000873 AMP-dependent synthetase/ligase YPA_RS10510 IPR010192 2-succinylbenzoate--CoA ligase YPA_RS10510 IPR020845 AMP-binding, conserved site YPA_RS10515 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase YPA_RS10515 IPR010196 O-succinylbenzoic acid (OSB) synthetase YPA_RS10515 IPR010197 O-succinylbenzoate synthase, low GC Gram-positive bacteria-type YPA_RS10515 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal YPA_RS10515 IPR029017 Enolase N-terminal domain-like YPA_RS10515 IPR029065 Enolase C-terminal domain-like YPA_RS10520 IPR001753 Crotonase superfamily YPA_RS10520 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase YPA_RS10520 IPR014748 Crontonase, C-terminal YPA_RS10520 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site YPA_RS10520 IPR029045 ClpP/crotonase-like domain YPA_RS10525 IPR000073 Alpha/beta hydrolase fold-1 YPA_RS10525 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase YPA_RS10525 IPR029058 Alpha/Beta hydrolase fold YPA_RS10530 IPR004433 Menaquinone biosynthesis protein MenD YPA_RS10530 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YPA_RS10530 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain YPA_RS10530 IPR029061 Thiamin diphosphate-binding fold YPA_RS10530 IPR032264 YPA_RS10530 YPA_RS10535 IPR004561 Isochorismate synthase YPA_RS10535 IPR005801 ADC synthase YPA_RS10535 IPR015890 Chorismate binding, C-terminal YPA_RS10545 IPR010279 Protein of unknown function DUF883, ElaB YPA_RS10560 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase YPA_RS10560 IPR004786 6-phosphogluconate dehydratase YPA_RS10560 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YPA_RS10560 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site YPA_RS10565 IPR005624 Domain of unknown function DUF336 YPA_RS10565 IPR010371 Uncharacterised protein family UPF0303 YPA_RS10570 IPR011701 Major facilitator superfamily YPA_RS10570 IPR020846 Major facilitator superfamily domain YPA_RS10575 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPA_RS10575 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain YPA_RS10575 IPR016040 NAD(P)-binding domain YPA_RS10585 IPR000843 Transcription regulator HTH, LacI YPA_RS10585 IPR001761 Periplasmic binding protein/LacI sugar binding domain YPA_RS10585 IPR010982 Lambda repressor-like, DNA-binding domain YPA_RS10585 IPR028082 Periplasmic binding protein-like I YPA_RS10590 IPR003790 Protein of unknown function DUF187 YPA_RS10590 IPR013781 Glycoside hydrolase, catalytic domain YPA_RS10590 IPR017853 Glycoside hydrolase, superfamily YPA_RS10595 IPR002347 Glucose/ribitol dehydrogenase YPA_RS10595 IPR016040 NAD(P)-binding domain YPA_RS10595 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPA_RS10600 IPR006001 Carbohydrate kinase, thermoresistant glucokinase YPA_RS10600 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS10600 IPR031322 YPA_RS10600 YPA_RS10605 IPR004375 Conserved hypothetical protein CHP00022 YPA_RS10615 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase YPA_RS10615 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 YPA_RS10620 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase YPA_RS10620 IPR003918 NADH:ubiquinone oxidoreductase YPA_RS10620 IPR010227 NADH-quinone oxidoreductase, chain M/4 YPA_RS10625 IPR001516 NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal YPA_RS10625 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase YPA_RS10625 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 YPA_RS10625 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup YPA_RS10630 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K YPA_RS10635 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 YPA_RS10640 IPR010226 NADH-quinone oxidoreductase, chain I YPA_RS10640 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPA_RS10640 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPA_RS10645 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H YPA_RS10645 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site YPA_RS10650 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site YPA_RS10650 IPR001041 2Fe-2S ferredoxin-type domain YPA_RS10650 IPR006656 Molybdopterin oxidoreductase YPA_RS10650 IPR006657 Molydopterin dinucleotide-binding domain YPA_RS10650 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain YPA_RS10650 IPR009010 Aspartate decarboxylase-like domain YPA_RS10650 IPR010228 NADH:ubiquinone oxidoreductase, subunit G YPA_RS10650 IPR012675 Beta-grasp domain YPA_RS10650 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding YPA_RS10655 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site YPA_RS10655 IPR011537 NADH ubiquinone oxidoreductase, F subunit YPA_RS10655 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit YPA_RS10655 IPR019575 NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding YPA_RS10660 IPR002023 NADH-quinone oxidoreductase subunit E-like YPA_RS10660 IPR012336 Thioredoxin-like fold YPA_RS10665 IPR001135 NADH-quinone oxidoreductase, subunit D YPA_RS10665 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit YPA_RS10665 IPR010218 NADH dehydrogenase, subunit C YPA_RS10665 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site YPA_RS10665 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H YPA_RS10665 IPR023062 NADH dehydrogenase, subunit CD YPA_RS10665 IPR029014 NiFe hydrogenase-like YPA_RS10670 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit YPA_RS10670 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit YPA_RS10675 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 YPA_RS10675 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid YPA_RS10680 IPR000847 Transcription regulator HTH, LysR YPA_RS10680 IPR005119 LysR, substrate-binding YPA_RS10680 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS10690 IPR004839 Aminotransferase, class I/classII YPA_RS10690 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPA_RS10690 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPA_RS10690 IPR015424 Pyridoxal phosphate-dependent transferase YPA_RS10695 IPR003607 HD/PDEase domain YPA_RS10695 IPR006674 HD domain YPA_RS10695 IPR022971 5'-deoxynucleotidase YfbR YPA_RS10705 IPR004680 Citrate transporter-like domain YPA_RS10705 IPR006037 Regulator of K+ conductance, C-terminal YPA_RS10705 IPR031312 YPA_RS10705 YPA_RS10710 IPR006439 HAD hydrolase, subfamily IA YPA_RS10710 IPR023198 Phosphoglycolate phosphatase, domain 2 YPA_RS10710 IPR023214 HAD-like domain YPA_RS10715 IPR005587 Uncharacterised protein family UPF0304, YfbU YPA_RS10715 IPR023145 YfbU, helix-hairpin domain YPA_RS10715 IPR023146 YfbU, alpha-helical bundle domain YPA_RS10720 IPR007334 Uncharacterised protein family UPF0208 YPA_RS10730 IPR000890 Aliphatic acid kinase, short-chain YPA_RS10730 IPR004372 Acetate/Proprionate kinase YPA_RS10730 IPR023865 Aliphatic acid kinase, short-chain, conserved site YPA_RS10735 IPR002505 Phosphate acetyl/butaryl transferase YPA_RS10735 IPR004614 Phosphate acetyltransferase YPA_RS10735 IPR010766 DRTGG YPA_RS10735 IPR016475 Phosphate acetyltransferase, bacteria YPA_RS10735 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS10735 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain like YPA_RS10740 IPR000843 Transcription regulator HTH, LacI YPA_RS10740 IPR010982 Lambda repressor-like, DNA-binding domain YPA_RS10740 IPR028082 Periplasmic binding protein-like I YPA_RS10745 IPR002178 PTS EIIA type-2 domain YPA_RS10745 IPR016152 Phosphotransferase/anion transporter YPA_RS10750 IPR003501 Phosphotransferase system, EIIB component, type 2/3 YPA_RS10755 IPR004703 Phosphotransferase system, sugar-specific permease component YPA_RS10760 IPR000086 NUDIX hydrolase domain YPA_RS10760 IPR015797 NUDIX hydrolase domain-like YPA_RS10760 IPR024195 NUDIX hydrolase, YfcD, predicted YPA_RS10765 IPR000979 Phosphodiesterase MJ0936/Vps29 YPA_RS10765 IPR020935 Phosphodiesterase YfcE, conserved site YPA_RS10765 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type YPA_RS10765 IPR029052 Metallo-dependent phosphatase-like YPA_RS10770 IPR001633 EAL domain YPA_RS10775 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain YPA_RS10775 IPR010099 Sugar nucleotide epimerase YfcH,-like putative YPA_RS10775 IPR013549 Domain of unknown function DUF1731 YPA_RS10775 IPR016040 NAD(P)-binding domain YPA_RS10780 IPR003439 ABC transporter-like YPA_RS10780 IPR003593 AAA+ ATPase domain YPA_RS10780 IPR017871 ABC transporter, conserved site YPA_RS10780 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS10780 IPR030679 YPA_RS10780 YPA_RS10785 IPR000515 MetI-like domain YPA_RS10785 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family YPA_RS10790 IPR000515 MetI-like domain YPA_RS10790 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family YPA_RS10790 IPR030199 YPA_RS10790 YPA_RS10795 IPR001638 Extracellular solute-binding protein, family 3 YPA_RS10795 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein YPA_RS10795 IPR018313 Extracellular solute-binding protein, family 3, conserved site YPA_RS10800 IPR001584 Integrase, catalytic core YPA_RS10800 IPR006120 Resolvase, HTH domain YPA_RS10800 IPR009057 Homeodomain-like YPA_RS10800 IPR012337 Ribonuclease H-like domain YPA_RS10805 IPR001270 ClpA/B family YPA_RS10805 IPR002611 IstB-like ATP-binding protein YPA_RS10805 IPR003593 AAA+ ATPase domain YPA_RS10805 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS10805 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS10810 IPR003382 Flavoprotein YPA_RS10810 IPR004507 Decarboxylase UbiX/Pad1 YPA_RS10815 IPR000836 Phosphoribosyltransferase domain YPA_RS10815 IPR005854 Amidophosphoribosyl transferase YPA_RS10815 IPR029055 Nucleophile aminohydrolases, N-terminal YPA_RS10815 IPR029057 Phosphoribosyltransferase-like YPA_RS10820 IPR003825 Colicin V production, CvpA YPA_RS10825 IPR007730 Sporulation-related domain YPA_RS10825 IPR032898 YPA_RS10825 YPA_RS10830 IPR001645 Folylpolyglutamate synthetase YPA_RS10830 IPR004101 Mur ligase, C-terminal YPA_RS10830 IPR013221 Mur ligase, central YPA_RS10830 IPR018109 Folylpolyglutamate synthetase, conserved site YPA_RS10835 IPR000022 Carboxyl transferase YPA_RS10835 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit YPA_RS10835 IPR029045 ClpP/crotonase-like domain YPA_RS10840 IPR032816 YPA_RS10840 YPA_RS10840 IPR032818 YPA_RS10840 YPA_RS10845 IPR001406 Pseudouridine synthase I, TruA YPA_RS10845 IPR020094 Pseudouridine synthase I, TruA, N-terminal YPA_RS10845 IPR020095 Pseudouridine synthase I, TruA, C-terminal YPA_RS10845 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain YPA_RS10845 IPR020103 Pseudouridine synthase, catalytic domain YPA_RS10850 IPR000534 Semialdehyde dehydrogenase, NAD-binding YPA_RS10850 IPR012080 Aspartate-semialdehyde dehydrogenase YPA_RS10850 IPR012280 Semialdehyde dehydrogenase, dimerisation domain YPA_RS10850 IPR016040 NAD(P)-binding domain YPA_RS10855 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPA_RS10855 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain YPA_RS10855 IPR016040 NAD(P)-binding domain YPA_RS10855 IPR020921 Erythronate-4-phosphate dehydrogenase YPA_RS10855 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain YPA_RS10855 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YPA_RS10855 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YPA_RS10860 IPR003313 AraC-type arabinose-binding/dimerisation domain YPA_RS10860 IPR009057 Homeodomain-like YPA_RS10860 IPR011051 RmlC-like cupin domain YPA_RS10860 IPR014710 RmlC-like jelly roll fold YPA_RS10860 IPR018060 DNA binding HTH domain, AraC-type YPA_RS10860 IPR018062 HTH domain AraC-type, conserved site YPA_RS10860 IPR020449 Transcription regulator HTH, AraC- type YPA_RS10870 IPR000620 Drug/metabolite transporter YPA_RS10875 IPR023597 Flagellar regulator Flk YPA_RS10880 IPR000259 Fimbrial-type adhesion domain YPA_RS10880 IPR008966 Adhesion domain YPA_RS10885 IPR001920 Asp/Glu racemase YPA_RS10885 IPR004380 Aspartate racemase YPA_RS10885 IPR015942 Asp/Glu/hydantoin racemase YPA_RS10885 IPR018187 Asp/Glu racemase, active site YPA_RS10890 IPR014030 Beta-ketoacyl synthase, N-terminal YPA_RS10890 IPR014031 Beta-ketoacyl synthase, C-terminal YPA_RS10890 IPR016039 Thiolase-like YPA_RS10890 IPR018201 Beta-ketoacyl synthase, active site YPA_RS10890 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPA_RS10895 IPR006076 FAD dependent oxidoreductase YPA_RS10895 IPR008471 MnmC-like methyltransferase YPA_RS10895 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal YPA_RS10895 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC YPA_RS10895 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPA_RS10895 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPA_RS10900 IPR014987 Uncharacterised protein family YfcL YPA_RS10900 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal YPA_RS10905 IPR007411 Protein of unknown function DUF462 YPA_RS10910 IPR002781 Transmembrane protein TauE like YPA_RS10915 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase YPA_RS10915 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain YPA_RS10920 IPR000453 Chorismate synthase YPA_RS10920 IPR020541 Chorismate synthase, conserved site YPA_RS10925 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPA_RS10925 IPR004556 Modification methylase HemK YPA_RS10925 IPR007848 Methyltransferase small domain YPA_RS10925 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase YPA_RS10925 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPA_RS10930 IPR002625 Smr protein/MutS2 C-terminal YPA_RS10930 IPR022990 Uncharacterised protein family UPF0115 YPA_RS10940 IPR004449 Phosphohistidine phosphatase SixA, subgroup YPA_RS10940 IPR013078 Histidine phosphatase superfamily, clade-1 YPA_RS10940 IPR029033 Histidine phosphatase superfamily YPA_RS10945 IPR001753 Crotonase superfamily YPA_RS10945 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal YPA_RS10945 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding YPA_RS10945 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site YPA_RS10945 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YPA_RS10945 IPR012802 Fatty oxidation complex, alpha subunit FadJ YPA_RS10945 IPR013328 Dehydrogenase, multihelical YPA_RS10945 IPR016040 NAD(P)-binding domain YPA_RS10945 IPR029045 ClpP/crotonase-like domain YPA_RS10950 IPR002155 Thiolase YPA_RS10950 IPR012806 Acetyl-CoA C-acyltransferase FadI YPA_RS10950 IPR016039 Thiolase-like YPA_RS10950 IPR020610 Thiolase, active site YPA_RS10950 IPR020613 Thiolase, conserved site YPA_RS10950 IPR020615 Thiolase, acyl-enzyme intermediate active site YPA_RS10950 IPR020616 Thiolase, N-terminal YPA_RS10950 IPR020617 Thiolase, C-terminal YPA_RS10955 IPR005272 Conserved hypothetical protein CHP00743 YPA_RS10960 IPR005017 Membrane protein, aromatic hydrocarbon degradation YPA_RS10965 IPR007428 VacJ-like lipoprotein YPA_RS10970 IPR011990 Tetratricopeptide-like helical domain YPA_RS10970 IPR017560 Cytochrome c-type biogenesis protein CcmI YPA_RS10975 IPR005616 Cytochrome C biogenesis protein CcmH YPA_RS10980 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE YPA_RS10980 IPR012336 Thioredoxin-like fold YPA_RS10980 IPR013740 Redoxin YPA_RS10980 IPR017937 Thioredoxin, conserved site YPA_RS10985 IPR002541 Cytochrome c assembly protein YPA_RS10985 IPR003567 Cytochrome c-type biogenesis protein YPA_RS10985 IPR003568 Cytochrome c-type biogenesis protein CcmF YPA_RS10985 IPR032523 YPA_RS10985 YPA_RS10990 IPR004329 CcmE/CycJ protein YPA_RS10990 IPR012340 Nucleic acid-binding, OB-fold YPA_RS10995 IPR007078 Haem exporter protein D (CcmD) YPA_RS11000 IPR002541 Cytochrome c assembly protein YPA_RS11000 IPR003557 Cytochrome c-type biogenesis protein CcmC YPA_RS11005 IPR003544 Cytochrome c-type biogenesis protein CcmB YPA_RS11005 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria YPA_RS11010 IPR003439 ABC transporter-like YPA_RS11010 IPR003593 AAA+ ATPase domain YPA_RS11010 IPR005895 ABC transporter, haem export, CcmA YPA_RS11010 IPR017871 ABC transporter, conserved site YPA_RS11010 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS11025 IPR007156 LemA YPA_RS11025 IPR023353 LemA-like domain YPA_RS11030 IPR018702 Protein of unknown function DUF2207, membrane YPA_RS11035 IPR004624 PhnA protein YPA_RS11035 IPR013987 PhnA protein, N-terminal YPA_RS11035 IPR013988 PhnA protein, C-terminal YPA_RS11045 IPR007048 GpW/Gp25/anti-adapter protein IraD YPA_RS11050 IPR009211 Predicted virulence protein, SciE type YPA_RS11050 IPR011990 Tetratricopeptide-like helical domain YPA_RS11060 IPR008727 PAAR motif YPA_RS11065 IPR006531 Gp5 N-terminal YPA_RS11065 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPA_RS11065 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPA_RS11070 IPR009612 ImcF-related YPA_RS11070 IPR010623 Domain of unknown function DUF1215 YPA_RS11070 IPR017731 Type VI secretion system, IcmF YPA_RS11070 IPR025743 ImcF-related, N-terminal domain YPA_RS11070 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS11075 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal YPA_RS11075 IPR017732 Type IV / VI secretion system, DotU YPA_RS11075 IPR017733 Type VI secretion system, OmpA/MotB domain YPA_RS11080 IPR001270 ClpA/B family YPA_RS11080 IPR002611 IstB-like ATP-binding protein YPA_RS11080 IPR003593 AAA+ ATPase domain YPA_RS11080 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS11080 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS11085 IPR001584 Integrase, catalytic core YPA_RS11085 IPR006120 Resolvase, HTH domain YPA_RS11085 IPR009057 Homeodomain-like YPA_RS11085 IPR012337 Ribonuclease H-like domain YPA_RS11090 IPR017732 Type IV / VI secretion system, DotU YPA_RS11095 IPR010263 Protein of unknown function DUF876 YPA_RS11100 IPR017734 Type VI secretion system, lipoprotein SciN YPA_RS11105 IPR008514 Type VI secretion system effector, Hcp YPA_RS11110 IPR010269 Protein of unknown function DUF877 YPA_RS11115 IPR008312 Uncharacterised conserved protein UCP028301 YPA_RS11120 IPR000259 Fimbrial-type adhesion domain YPA_RS11120 IPR008966 Adhesion domain YPA_RS11125 IPR000015 Outer membrane usher protein YPA_RS11125 IPR025949 PapC-like, C-terminal domain YPA_RS11130 IPR001207 Transposase, mutator type YPA_RS11135 IPR000015 Outer membrane usher protein YPA_RS11135 IPR025885 PapC, N-terminal domain YPA_RS11140 IPR001829 Pili assembly chaperone, bacterial YPA_RS11140 IPR008962 PapD-like YPA_RS11140 IPR016147 PapD, N-terminal, bacterial YPA_RS11140 IPR016148 Pili assembly chaperone, C-terminal domain YPA_RS11140 IPR018046 Pili assembly chaperone, conserved site YPA_RS11145 IPR000259 Fimbrial-type adhesion domain YPA_RS11145 IPR008966 Adhesion domain YPA_RS11150 IPR001270 ClpA/B family YPA_RS11150 IPR003593 AAA+ ATPase domain YPA_RS11150 IPR003959 ATPase, AAA-type, core YPA_RS11150 IPR004176 Clp, N-terminal YPA_RS11150 IPR017729 Type VI secretion system, ATPase ClpV1 YPA_RS11150 IPR018368 ClpA/B, conserved site 1 YPA_RS11150 IPR019489 Clp ATPase, C-terminal YPA_RS11150 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS11150 IPR028299 ClpA/B, conserved site 2 YPA_RS11155 IPR010272 Type VI secretion system, VCA0110 YPA_RS11160 IPR010732 Protein of unknown function DUF1305 YPA_RS11165 IPR010657 ImpA, N-terminal YPA_RS11170 IPR000259 Fimbrial-type adhesion domain YPA_RS11170 IPR008966 Adhesion domain YPA_RS11175 IPR021067 Glycosyltransferase, GlcNAc YPA_RS11175 IPR029044 Nucleotide-diphospho-sugar transferases YPA_RS11185 IPR006664 Outer membrane protein, bacterial YPA_RS11185 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal YPA_RS11190 IPR014894 Protein DcrB YPA_RS11190 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich YPA_RS11195 IPR000792 Transcription regulator LuxR, C-terminal YPA_RS11195 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS11195 IPR016032 Signal transduction response regulator, C-terminal effector YPA_RS11200 IPR011757 Lytic transglycosylase MltB YPA_RS11200 IPR023346 Lysozyme-like domain YPA_RS11200 IPR031304 YPA_RS11200 YPA_RS11205 IPR006061 Bacterial extracellular solute-binding family 1, conserved site YPA_RS11205 IPR026045 Ferric binding protein YPA_RS11210 IPR000515 MetI-like domain YPA_RS11215 IPR003439 ABC transporter-like YPA_RS11215 IPR003593 AAA+ ATPase domain YPA_RS11215 IPR008995 Molybdate/tungstate binding, C-terminal YPA_RS11215 IPR017871 ABC transporter, conserved site YPA_RS11215 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS11220 IPR014591 Uncharacterised conserved protein UCP034455 YPA_RS11220 IPR021125 Protein of unknown function DUF2127 YPA_RS11225 IPR008514 Type VI secretion system effector, Hcp YPA_RS11230 IPR025320 Protein of unknown function DUF4225 YPA_RS11235 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site YPA_RS11235 IPR006656 Molybdopterin oxidoreductase YPA_RS11235 IPR006657 Molydopterin dinucleotide-binding domain YPA_RS11235 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain YPA_RS11235 IPR009010 Aspartate decarboxylase-like domain YPA_RS11235 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE YPA_RS11235 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal YPA_RS11235 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site YPA_RS11240 IPR014297 Dimethylsulphoxide reductase, chain B YPA_RS11240 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPA_RS11240 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPA_RS11245 IPR007059 DMSO reductase anchor subunit (DmsC) YPA_RS11250 IPR020945 DMSO/Nitrate reductase chaperone YPA_RS11250 IPR026269 Tat proofreading chaperone DmsD-type YPA_RS11255 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPA_RS11255 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPA_RS11260 IPR008517 Protein of unknown function DUF799 YPA_RS11265 IPR014508 Uncharacterised conserved protein, TPR-like repeat YPA_RS11270 IPR005534 Curli production assembly/transport component CsgG YPA_RS11270 IPR007195 TolB, N-terminal YPA_RS11275 IPR032753 YPA_RS11275 YPA_RS11280 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase YPA_RS11280 IPR016174 Di-haem cytochrome, transmembrane YPA_RS11285 IPR004839 Aminotransferase, class I/classII YPA_RS11285 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPA_RS11285 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPA_RS11285 IPR015424 Pyridoxal phosphate-dependent transferase YPA_RS11290 IPR010856 Protein of unknown function DUF1479 YPA_RS11290 IPR027443 Isopenicillin N synthase-like YPA_RS11295 IPR003836 Glucokinase YPA_RS11300 IPR007896 Transmembrane pair, bacterial YPA_RS11305 IPR000847 Transcription regulator HTH, LysR YPA_RS11305 IPR005119 LysR, substrate-binding YPA_RS11305 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS11310 IPR001395 Aldo/keto reductase YPA_RS11310 IPR023210 NADP-dependent oxidoreductase domain YPA_RS11315 IPR019638 Protein of unknown function DUF2502 YPA_RS11320 IPR001046 NRAMP family YPA_RS11325 IPR002668 Concentrative nucleoside transporter N-terminal domain YPA_RS11325 IPR008276 Concentrative nucleoside transporter YPA_RS11325 IPR011642 Nucleoside recognition Gate YPA_RS11325 IPR011657 Concentrative nucleoside transporter C-terminal domain YPA_RS11345 IPR000924 Glutamyl/glutaminyl-tRNA synthetase YPA_RS11345 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPA_RS11345 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial YPA_RS11345 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding YPA_RS11345 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPA_RS11345 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain YPA_RS11345 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain YPA_RS11345 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 YPA_RS11350 IPR002686 Transposase IS200-like YPA_RS11360 IPR009267 Protein of unknown function DUF925 YPA_RS11365 IPR025577 FlxA-like protein YPA_RS11370 IPR024530 Protein of unknown function DUF3820 YPA_RS11375 IPR001357 BRCT domain YPA_RS11375 IPR001679 NAD-dependent DNA ligase YPA_RS11375 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 YPA_RS11375 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type YPA_RS11375 IPR004150 NAD-dependent DNA ligase, OB-fold YPA_RS11375 IPR010994 RuvA domain 2-like YPA_RS11375 IPR012340 Nucleic acid-binding, OB-fold YPA_RS11375 IPR013839 NAD-dependent DNA ligase, adenylation YPA_RS11375 IPR013840 NAD-dependent DNA ligase, N-terminal YPA_RS11375 IPR018239 NAD-dependent DNA ligase, active site YPA_RS11375 IPR033136 YPA_RS11375 YPA_RS11380 IPR007449 ZipA, C-terminal FtsZ-binding domain YPA_RS11380 IPR011919 Cell division protein ZipA YPA_RS11390 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site YPA_RS11390 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPA_RS11390 IPR005856 Cysteine synthase K/M YPA_RS11390 IPR005859 Cysteine synthase A YPA_RS11395 IPR000032 Phosphocarrier HPr protein-like YPA_RS11395 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site YPA_RS11395 IPR002114 Phosphotransferase system, HPr serine phosphorylation site YPA_RS11400 IPR000121 PEP-utilising enzyme, C-terminal YPA_RS11400 IPR006318 Phosphoenolpyruvate-utilising enzyme YPA_RS11400 IPR008279 PEP-utilising enzyme, mobile domain YPA_RS11400 IPR008731 Phosphotransferase system, enzyme I N-terminal YPA_RS11400 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain YPA_RS11400 IPR018274 PEP-utilising enzyme, active site YPA_RS11400 IPR023151 PEP-utilising enzyme, conserved site YPA_RS11400 IPR024692 Phosphotransferase system, enzyme I YPA_RS11405 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 YPA_RS11405 IPR011055 Duplicated hybrid motif YPA_RS11410 IPR002686 Transposase IS200-like YPA_RS11420 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPA_RS11420 IPR003660 HAMP linker domain YPA_RS11420 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPA_RS11420 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPA_RS11425 IPR001789 Signal transduction response regulator, receiver domain YPA_RS11425 IPR001867 Signal transduction response regulator, C-terminal YPA_RS11425 IPR011006 CheY-like superfamily YPA_RS11425 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS11425 IPR016032 Signal transduction response regulator, C-terminal effector YPA_RS11430 IPR006143 RND efflux pump, membrane fusion protein YPA_RS11430 IPR032317 YPA_RS11430 YPA_RS11435 IPR003439 ABC transporter-like YPA_RS11435 IPR003593 AAA+ ATPase domain YPA_RS11435 IPR003838 Permease FtsX-like YPA_RS11435 IPR017871 ABC transporter, conserved site YPA_RS11435 IPR025857 MacB-like periplasmic core domain YPA_RS11435 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS11440 IPR001763 Rhodanese-like domain YPA_RS11440 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YPA_RS11440 IPR016156 FAD/NAD-linked reductase, dimerisation domain YPA_RS11440 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPA_RS11445 IPR001734 Sodium/solute symporter YPA_RS11450 IPR021741 Protein of unknown function DUF3311 YPA_RS11455 IPR000587 Creatinase, N-terminal YPA_RS11455 IPR000994 Peptidase M24, structural domain YPA_RS11455 IPR028980 Creatinase/Aminopeptidase P, N-terminal YPA_RS11460 IPR000587 Creatinase, N-terminal YPA_RS11460 IPR028980 Creatinase/Aminopeptidase P, N-terminal YPA_RS11460 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal YPA_RS11465 IPR004839 Aminotransferase, class I/classII YPA_RS11465 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPA_RS11465 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPA_RS11465 IPR015424 Pyridoxal phosphate-dependent transferase YPA_RS11465 IPR027619 Putative C-S lyase YPA_RS11470 IPR002035 von Willebrand factor, type A YPA_RS11475 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPA_RS11475 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPA_RS11475 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPA_RS11480 IPR001789 Signal transduction response regulator, receiver domain YPA_RS11480 IPR001867 Signal transduction response regulator, C-terminal YPA_RS11480 IPR011006 CheY-like superfamily YPA_RS11480 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS11480 IPR016032 Signal transduction response regulator, C-terminal effector YPA_RS11485 IPR032675 YPA_RS11485 YPA_RS11490 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site YPA_RS11490 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPA_RS11490 IPR005856 Cysteine synthase K/M YPA_RS11490 IPR005858 Cysteine synthase B YPA_RS11495 IPR003439 ABC transporter-like YPA_RS11495 IPR003593 AAA+ ATPase domain YPA_RS11495 IPR005666 Sulphate transport system permease protein 1 YPA_RS11495 IPR008995 Molybdate/tungstate binding, C-terminal YPA_RS11495 IPR017871 ABC transporter, conserved site YPA_RS11495 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS11500 IPR000515 MetI-like domain YPA_RS11500 IPR005667 Sulphate ABC transporter permease protein 2 YPA_RS11500 IPR011866 Sulphate ABC transporter, permease protein CysW YPA_RS11505 IPR000515 MetI-like domain YPA_RS11505 IPR005667 Sulphate ABC transporter permease protein 2 YPA_RS11505 IPR011865 Sulphate ABC transporter, permease protein CysT YPA_RS11510 IPR005669 Thiosulphate/Sulfate-binding protein YPA_RS11515 IPR004742 Sialic acid transporter YPA_RS11515 IPR011701 Major facilitator superfamily YPA_RS11515 IPR020846 Major facilitator superfamily domain YPA_RS11520 IPR000281 Helix-turn-helix protein RpiR YPA_RS11520 IPR001347 Sugar isomerase (SIS) YPA_RS11520 IPR009057 Homeodomain-like YPA_RS11520 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS11530 IPR004375 Conserved hypothetical protein CHP00022 YPA_RS11535 IPR000600 ROK YPA_RS11535 IPR023945 N-acetylmannosamine kinase, bacterial YPA_RS11540 IPR001611 Leucine-rich repeat YPA_RS11540 IPR032674 YPA_RS11540 YPA_RS11540 IPR032675 YPA_RS11540 YPA_RS11545 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase YPA_RS11545 IPR011060 Ribulose-phosphate binding barrel YPA_RS11545 IPR013785 Aldolase-type TIM barrel YPA_RS11550 IPR002220 DapA-like YPA_RS11550 IPR013785 Aldolase-type TIM barrel YPA_RS11550 IPR020624 Dihydrodipicolinate synthetase, conserved site YPA_RS11555 IPR006314 Dyp-type peroxidase YPA_RS11555 IPR011008 Dimeric alpha-beta barrel YPA_RS11560 IPR010938 Protein of unknown function DUF1131 YPA_RS11565 IPR005220 Viral OB-fold, YgiW YPA_RS11565 IPR016052 Bacteriophage 933W, L0136 YPA_RS11570 IPR003991 Pertactin virulence factor family YPA_RS11570 IPR004899 Pertactin, central region YPA_RS11570 IPR005546 Autotransporter beta-domain YPA_RS11570 IPR006315 Outer membrane autotransporter barrel YPA_RS11570 IPR011050 Pectin lyase fold/virulence factor YPA_RS11570 IPR012332 P22 tailspike C-terminal domain-like YPA_RS11585 IPR000182 GNAT domain YPA_RS11585 IPR016181 Acyl-CoA N-acyltransferase YPA_RS11585 IPR023072 Acetyltransferase, YpeA YPA_RS11590 IPR001260 Coproporphyrinogen III oxidase, aerobic YPA_RS11590 IPR018375 Coproporphyrinogen III oxidase, conserved site YPA_RS11595 IPR003791 Protein of unknown function UPF0178 YPA_RS11600 IPR002505 Phosphate acetyl/butaryl transferase YPA_RS11600 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase YPA_RS11600 IPR012301 Malic enzyme, N-terminal domain YPA_RS11600 IPR012302 Malic enzyme, NAD-binding YPA_RS11600 IPR015884 Malic enzyme, conserved site YPA_RS11600 IPR016040 NAD(P)-binding domain YPA_RS11610 IPR001270 ClpA/B family YPA_RS11610 IPR002611 IstB-like ATP-binding protein YPA_RS11610 IPR003593 AAA+ ATPase domain YPA_RS11610 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS11610 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS11615 IPR001584 Integrase, catalytic core YPA_RS11615 IPR006120 Resolvase, HTH domain YPA_RS11615 IPR009057 Homeodomain-like YPA_RS11615 IPR012337 Ribonuclease H-like domain YPA_RS11620 IPR015797 NUDIX hydrolase domain-like YPA_RS11625 IPR005126 NapC/NirT cytochrome c, N-terminal YPA_RS11625 IPR011031 Multihaem cytochrome YPA_RS11625 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT YPA_RS11625 IPR024717 Denitrification system component NapC/NirT/NrfH YPA_RS11630 IPR005591 Nitrate reductase cytochrome c-type subunit NapB YPA_RS11630 IPR011031 Multihaem cytochrome YPA_RS11630 IPR027406 Periplasmic nitrate reductase NapB subunit, heme binding domain YPA_RS11635 IPR006656 Molybdopterin oxidoreductase YPA_RS11635 IPR006657 Molydopterin dinucleotide-binding domain YPA_RS11635 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain YPA_RS11635 IPR009010 Aspartate decarboxylase-like domain YPA_RS11635 IPR010051 Periplasmic nitrate reductase, large subunit YPA_RS11635 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal YPA_RS11635 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site YPA_RS11640 IPR005623 Chaperone NapD, nitrate reductase assembly YPA_RS11645 IPR004496 Ferredoxin-type protein NapF YPA_RS11645 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPA_RS11645 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPA_RS11650 IPR000792 Transcription regulator LuxR, C-terminal YPA_RS11650 IPR001789 Signal transduction response regulator, receiver domain YPA_RS11650 IPR011006 CheY-like superfamily YPA_RS11650 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS11650 IPR016032 Signal transduction response regulator, C-terminal effector YPA_RS11655 IPR017162 Uncharacterised conserved protein UCP037266 YPA_RS11660 IPR001036 Acriflavin resistance protein YPA_RS11660 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 YPA_RS11660 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPA_RS11670 IPR007404 Protein of unknown function DUF457 YPA_RS11675 IPR007197 Radical SAM YPA_RS11675 IPR013785 Aldolase-type TIM barrel YPA_RS11675 IPR023867 Anaerobic sulphatase maturase, radical SAM YPA_RS11675 IPR023885 4Fe4S-binding SPASM domain YPA_RS11680 IPR000917 Sulfatase YPA_RS11680 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha YPA_RS11680 IPR017850 Alkaline-phosphatase-like, core domain YPA_RS11680 IPR024607 Sulfatase, conserved site YPA_RS11685 IPR003439 ABC transporter-like YPA_RS11685 IPR003593 AAA+ ATPase domain YPA_RS11685 IPR008995 Molybdate/tungstate binding, C-terminal YPA_RS11685 IPR017871 ABC transporter, conserved site YPA_RS11685 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS11690 IPR000515 MetI-like domain YPA_RS11700 IPR011990 Tetratricopeptide-like helical domain YPA_RS11705 IPR006504 Transcriptional regulator Spx/MgsR YPA_RS11705 IPR006660 Arsenate reductase-like YPA_RS11705 IPR012336 Thioredoxin-like fold YPA_RS11710 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site YPA_RS11710 IPR002933 Peptidase M20 YPA_RS11710 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria YPA_RS11710 IPR011650 Peptidase M20, dimerisation domain YPA_RS11715 IPR003709 Peptidase M15B/M15C YPA_RS11715 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain YPA_RS11720 IPR020910 Uncharacterised protein family UPF0370 YPA_RS11725 IPR000182 GNAT domain YPA_RS11725 IPR007807 Helicase domain YPA_RS11725 IPR013562 Domain of unknown function DUF1726 YPA_RS11725 IPR016181 Acyl-CoA N-acyltransferase YPA_RS11725 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA YPA_RS11725 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS11725 IPR032672 YPA_RS11725 YPA_RS11725 IPR033442 YPA_RS11725 YPA_RS11730 IPR007382 Uncharacterised protein family UPF0756, transmembrame YPA_RS11735 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative YPA_RS11740 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase YPA_RS11740 IPR013816 ATP-grasp fold, subdomain 2 YPA_RS11740 IPR018236 SAICAR synthetase, conserved site YPA_RS11740 IPR028923 SAICAR synthetase/ADE2, N-terminal YPA_RS11745 IPR002686 Transposase IS200-like YPA_RS11750 IPR010653 Lipoprotein, NlpB YPA_RS11750 IPR014524 Outer membrane protein assembly factor BamC YPA_RS11755 IPR002220 DapA-like YPA_RS11755 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA YPA_RS11755 IPR013785 Aldolase-type TIM barrel YPA_RS11755 IPR020624 Dihydrodipicolinate synthetase, conserved site YPA_RS11755 IPR020625 Dihydrodipicolinate synthetase, active site YPA_RS11760 IPR016867 Glycine cleavage repressor GcvR YPA_RS11765 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant YPA_RS11765 IPR012336 Thioredoxin-like fold YPA_RS11765 IPR024706 Peroxiredoxin, AhpC-type YPA_RS11785 IPR002549 Uncharacterised protein family UPF0118 YPA_RS11790 IPR001915 Peptidase M48 YPA_RS11790 IPR011716 Tetratricopeptide TPR-3 YPA_RS11790 IPR011990 Tetratricopeptide-like helical domain YPA_RS11790 IPR030873 YPA_RS11790 YPA_RS11795 IPR006659 Arsenate reductase YPA_RS11795 IPR006660 Arsenate reductase-like YPA_RS11795 IPR012336 Thioredoxin-like fold YPA_RS11800 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) YPA_RS11800 IPR017788 DnaA regulatory inactivator Hda YPA_RS11800 IPR020591 Chromosomal replication control, initiator DnaA-like YPA_RS11800 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae YPA_RS11800 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS11805 IPR002686 Transposase IS200-like YPA_RS11810 IPR005765 Uracil phosphoribosyl transferase YPA_RS11810 IPR029057 Phosphoribosyltransferase-like YPA_RS11815 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase YPA_RS11815 IPR010918 AIR synthase-related protein, C-terminal domain YPA_RS11815 IPR016188 PurM, N-terminal-like YPA_RS11820 IPR001555 Phosphoribosylglycinamide formyltransferase, active site YPA_RS11820 IPR002376 Formyl transferase, N-terminal YPA_RS11820 IPR004607 Phosphoribosylglycinamide formyltransferase YPA_RS11825 IPR000182 GNAT domain YPA_RS11825 IPR016181 Acyl-CoA N-acyltransferase YPA_RS11830 IPR020193 Flagellin lysine-N-methylase, C-terminal YPA_RS11835 IPR005358 Putative zinc- or iron-chelating domain containing protein YPA_RS11840 IPR003439 ABC transporter-like YPA_RS11840 IPR003593 AAA+ ATPase domain YPA_RS11840 IPR005670 Phosphate transport system permease protein 1 YPA_RS11840 IPR017871 ABC transporter, conserved site YPA_RS11840 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS11845 IPR000515 MetI-like domain YPA_RS11845 IPR005672 Phosphate transport system permease protein PstA YPA_RS11850 IPR000515 MetI-like domain YPA_RS11850 IPR015943 WD40/YVTN repeat-like-containing domain YPA_RS11855 IPR003414 Polyphosphate kinase YPA_RS11855 IPR024953 Polyphosphate kinase middle domain YPA_RS11855 IPR025198 Polyphosphate kinase N-terminal domain YPA_RS11855 IPR025200 Polyphosphate kinase C-terminal domain YPA_RS11860 IPR003695 Ppx/GppA phosphatase YPA_RS11860 IPR022371 Exopolyphosphatase YPA_RS11860 IPR030673 YPA_RS11860 YPA_RS11865 IPR022576 Protein of unknown function DUF2633 YPA_RS11870 IPR000644 CBS domain YPA_RS11870 IPR006667 SLC41 divalent cation transporters, integral membrane domain YPA_RS11870 IPR006668 Magnesium transporter, MgtE intracellular domain YPA_RS11870 IPR006669 Magnesium transporter MgtE YPA_RS11875 IPR013126 Heat shock protein 70 family YPA_RS11875 IPR018181 Heat shock protein 70, conserved site YPA_RS11880 IPR001584 Integrase, catalytic core YPA_RS11880 IPR006120 Resolvase, HTH domain YPA_RS11880 IPR009057 Homeodomain-like YPA_RS11880 IPR012337 Ribonuclease H-like domain YPA_RS11885 IPR001270 ClpA/B family YPA_RS11885 IPR002611 IstB-like ATP-binding protein YPA_RS11885 IPR003593 AAA+ ATPase domain YPA_RS11885 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS11885 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS11890 IPR000515 MetI-like domain YPA_RS11895 IPR000515 MetI-like domain YPA_RS11905 IPR004632 4-aminobutyrate aminotransferase, bacterial YPA_RS11905 IPR005814 Aminotransferase class-III YPA_RS11905 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPA_RS11905 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPA_RS11905 IPR015424 Pyridoxal phosphate-dependent transferase YPA_RS11910 IPR000524 Transcription regulator HTH, GntR YPA_RS11910 IPR004839 Aminotransferase, class I/classII YPA_RS11910 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS11910 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPA_RS11910 IPR015424 Pyridoxal phosphate-dependent transferase YPA_RS11915 IPR003439 ABC transporter-like YPA_RS11915 IPR003593 AAA+ ATPase domain YPA_RS11915 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit YPA_RS11915 IPR008995 Molybdate/tungstate binding, C-terminal YPA_RS11915 IPR013611 Transport-associated OB, type 2 YPA_RS11915 IPR017871 ABC transporter, conserved site YPA_RS11915 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS11920 IPR006143 RND efflux pump, membrane fusion protein YPA_RS11920 IPR022824 Multidrug resistance protein MdtA YPA_RS11925 IPR001036 Acriflavin resistance protein YPA_RS11925 IPR022831 Multidrug resistance protein MdtB YPA_RS11925 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPA_RS11930 IPR001036 Acriflavin resistance protein YPA_RS11930 IPR023931 Multidrug resistance protein MdtC YPA_RS11930 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPA_RS11935 IPR004638 Drug resistance transporter EmrB/QacA subfamily YPA_RS11935 IPR011701 Major facilitator superfamily YPA_RS11935 IPR020846 Major facilitator superfamily domain YPA_RS11935 IPR023721 Multidrug resistance protein MdtD, putative YPA_RS11940 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPA_RS11940 IPR003660 HAMP linker domain YPA_RS11940 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPA_RS11945 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPA_RS11945 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPA_RS11950 IPR001789 Signal transduction response regulator, receiver domain YPA_RS11950 IPR001867 Signal transduction response regulator, C-terminal YPA_RS11950 IPR011006 CheY-like superfamily YPA_RS11950 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS11955 IPR010879 Domain of unknown function DUF1508 YPA_RS11960 IPR001539 Peptidase U32 YPA_RS11960 IPR032525 YPA_RS11960 YPA_RS11965 IPR001206 Diacylglycerol kinase, catalytic domain YPA_RS11965 IPR005218 Diacylglycerol/lipid kinase YPA_RS11965 IPR016064 ATP-NAD kinase-like domain YPA_RS11965 IPR022433 Lipid kinase YegS YPA_RS11970 IPR014453 Inhibitor of vertebrate lysozyme YPA_RS11980 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase YPA_RS11980 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase YPA_RS11980 IPR029056 Ribokinase-like YPA_RS11985 IPR010351 Protein of unknown function DUF943 YPA_RS11995 IPR001207 Transposase, mutator type YPA_RS12005 IPR010665 Protein of unknown function DUF1240 YPA_RS12010 IPR010665 Protein of unknown function DUF1240 YPA_RS12015 IPR010665 Protein of unknown function DUF1240 YPA_RS12020 IPR010665 Protein of unknown function DUF1240 YPA_RS12025 IPR008514 Type VI secretion system effector, Hcp YPA_RS12040 IPR001674 GMP synthase, C-terminal YPA_RS12040 IPR004739 GMP synthase, N-terminal YPA_RS12040 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPA_RS12040 IPR017926 Glutamine amidotransferase YPA_RS12040 IPR022310 NAD/GMP synthase YPA_RS12040 IPR022955 GMP synthase YPA_RS12040 IPR029062 Class I glutamine amidotransferase-like YPA_RS12050 IPR000644 CBS domain YPA_RS12050 IPR001093 IMP dehydrogenase/GMP reductase YPA_RS12050 IPR005990 Inosine-5'-monophosphate dehydrogenase YPA_RS12050 IPR013785 Aldolase-type TIM barrel YPA_RS12050 IPR015875 IMP dehydrogenase / GMP reductase, conserved site YPA_RS12055 IPR003753 Exonuclease VII, large subunit YPA_RS12055 IPR020579 Exonuclease VII, large subunit, C-terminal YPA_RS12055 IPR025824 OB-fold nucleic acid binding domain YPA_RS12060 IPR010807 Protein of unknown function DUF1407 YPA_RS12060 IPR029037 YfgJ-like YPA_RS12065 IPR004776 Auxin efflux carrier YPA_RS12070 IPR005225 Small GTP-binding protein domain YPA_RS12070 IPR006073 GTP binding domain YPA_RS12070 IPR015946 K homology domain-like, alpha/beta YPA_RS12070 IPR016484 GTP-binding protein EngA YPA_RS12070 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS12070 IPR032859 YPA_RS12070 YPA_RS12075 IPR002372 Pyrrolo-quinoline quinone repeat YPA_RS12075 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily YPA_RS12075 IPR017687 Outer membrane protein assembly factor BamB YPA_RS12075 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat YPA_RS12075 IPR027295 Quinonprotein alcohol dehydrogenase-like domain YPA_RS12080 IPR011990 Tetratricopeptide-like helical domain YPA_RS12080 IPR018704 Domain of unknown function DUF09976 YPA_RS12080 IPR026039 Uncharacterised protein family UPF0070 YPA_RS12085 IPR004154 Anticodon-binding YPA_RS12085 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit YPA_RS12085 IPR015807 Histidine-tRNA ligase YPA_RS12090 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type YPA_RS12090 IPR013785 Aldolase-type TIM barrel YPA_RS12090 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial YPA_RS12090 IPR029065 Enolase C-terminal domain-like YPA_RS12095 IPR001387 Cro/C1-type helix-turn-helix domain YPA_RS12095 IPR010982 Lambda repressor-like, DNA-binding domain YPA_RS12095 IPR023690 Cytoskeleton protein RodZ YPA_RS12095 IPR025194 Domain of unknown function DUF4115 YPA_RS12100 IPR011990 Tetratricopeptide-like helical domain YPA_RS12100 IPR013360 Pilus biogenesis/stability type IV, PilW YPA_RS12100 IPR019734 Tetratricopeptide repeat YPA_RS12105 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr YPA_RS12105 IPR007197 Radical SAM YPA_RS12105 IPR013785 Aldolase-type TIM barrel YPA_RS12105 IPR027492 Dual-specificity RNA methyltransferase RlmN YPA_RS12110 IPR001564 Nucleoside diphosphate kinase YPA_RS12110 IPR023005 Nucleoside diphosphate kinase, active site YPA_RS12115 IPR001064 Beta/gamma crystallin YPA_RS12115 IPR011024 Gamma-crystallin-related YPA_RS12115 IPR013320 Concanavalin A-like lectin/glucanase, subgroup YPA_RS12115 IPR015059 Calcium-dependent cell adhesion molecule, N-terminal YPA_RS12115 IPR015185 Exotoxin A, binding YPA_RS12115 IPR016181 Acyl-CoA N-acyltransferase YPA_RS12125 IPR004899 Pertactin, central region YPA_RS12125 IPR005546 Autotransporter beta-domain YPA_RS12125 IPR006315 Outer membrane autotransporter barrel YPA_RS12125 IPR011050 Pectin lyase fold/virulence factor YPA_RS12125 IPR012332 P22 tailspike C-terminal domain-like YPA_RS12125 IPR030930 YPA_RS12125 YPA_RS12130 IPR004899 Pertactin, central region YPA_RS12130 IPR005546 Autotransporter beta-domain YPA_RS12130 IPR006315 Outer membrane autotransporter barrel YPA_RS12130 IPR011050 Pectin lyase fold/virulence factor YPA_RS12130 IPR012332 P22 tailspike C-terminal domain-like YPA_RS12135 IPR003991 Pertactin virulence factor family YPA_RS12135 IPR005546 Autotransporter beta-domain YPA_RS12135 IPR006315 Outer membrane autotransporter barrel YPA_RS12140 IPR009839 SseB protein N-terminal domain YPA_RS12140 IPR027945 SseB protein, C-terminal YPA_RS12145 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal YPA_RS12145 IPR008330 Peptidase M17, peptidase B YPA_RS12145 IPR011356 Leucine aminopeptidase/peptidase B YPA_RS12150 IPR007479 ISC system FeS cluster assembly, IscX YPA_RS12155 IPR001041 2Fe-2S ferredoxin-type domain YPA_RS12155 IPR001055 Adrenodoxin YPA_RS12155 IPR011536 Ferredoxin, 2Fe-2S type YPA_RS12155 IPR012675 Beta-grasp domain YPA_RS12155 IPR018298 Adrenodoxin, iron-sulphur binding site YPA_RS12160 IPR010236 ISC system FeS cluster assembly, HscA chaperone YPA_RS12160 IPR013126 Heat shock protein 70 family YPA_RS12160 IPR018181 Heat shock protein 70, conserved site YPA_RS12160 IPR029047 Heat shock protein 70kD, peptide-binding domain YPA_RS12160 IPR029048 Heat shock protein 70kD, C-terminal domain YPA_RS12165 IPR001623 DnaJ domain YPA_RS12165 IPR004640 Co-chaperone Hsc20 YPA_RS12165 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain YPA_RS12170 IPR000361 FeS cluster biogenesis YPA_RS12170 IPR011302 ISC system FeS cluster assembly, IscA scaffold YPA_RS12170 IPR016092 FeS cluster insertion protein YPA_RS12170 IPR017870 FeS cluster insertion, C-terminal, conserved site YPA_RS12175 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal YPA_RS12175 IPR011339 ISC system FeS cluster assembly, IscU scaffold YPA_RS12180 IPR000192 Aminotransferase class V domain YPA_RS12180 IPR010240 Cysteine desulfurase YPA_RS12180 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPA_RS12180 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPA_RS12180 IPR015424 Pyridoxal phosphate-dependent transferase YPA_RS12180 IPR016454 Cysteine desulfurase, NifS YPA_RS12180 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site YPA_RS12185 IPR000944 Transcription regulator Rrf2-like YPA_RS12185 IPR010242 Transcription factor HTH, IscR YPA_RS12185 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS12185 IPR030489 YPA_RS12185 YPA_RS12190 IPR001537 tRNA/rRNA methyltransferase, SpoU type YPA_RS12190 IPR004384 RNA methyltransferase TrmH, group 1 YPA_RS12190 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPA_RS12190 IPR029028 Alpha/beta knot methyltransferases YPA_RS12195 IPR000760 Inositol monophosphatase YPA_RS12195 IPR020550 Inositol monophosphatase, conserved site YPA_RS12195 IPR020583 Inositol monophosphatase, metal-binding site YPA_RS12195 IPR022337 Inositol monophosphatase, SuhB YPA_RS12200 IPR011541 Nickel/cobalt transporter, high-affinity YPA_RS12205 IPR010412 Protein of unknown function DUF1007 YPA_RS12205 IPR016537 Uncharacterised conserved protein UCP008159, YPA_RS12210 IPR011608 PRD domain YPA_RS12215 IPR020846 Major facilitator superfamily domain YPA_RS12215 IPR024989 Major facilitator superfamily associated domain YPA_RS12215 IPR026032 Phenylproprionate/maltose permease YPA_RS12220 IPR000758 Virulence-related outer membrane protein YPA_RS12220 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel YPA_RS12220 IPR027385 Outer membrane protein beta-barrel YPA_RS12230 IPR001085 Serine hydroxymethyltransferase YPA_RS12230 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPA_RS12230 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPA_RS12230 IPR015424 Pyridoxal phosphate-dependent transferase YPA_RS12230 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site YPA_RS12235 IPR000971 Globin YPA_RS12235 IPR001221 Phenol hydroxylase reductase YPA_RS12235 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPA_RS12235 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase YPA_RS12235 IPR008333 Oxidoreductase, FAD-binding domain YPA_RS12235 IPR009050 Globin-like YPA_RS12235 IPR012292 Globin, structural domain YPA_RS12235 IPR017938 Riboflavin synthase-like beta-barrel YPA_RS12235 IPR023950 Flavohemoprotein YPA_RS12240 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS12240 IPR032791 YPA_RS12240 YPA_RS12245 IPR032791 YPA_RS12245 YPA_RS12250 IPR002187 Nitrogen regulatory protein PII YPA_RS12250 IPR002332 Nitrogen regulatory protein P-II, urydylation site YPA_RS12250 IPR011322 Nitrogen regulatory PII-like, alpha/beta YPA_RS12250 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal YPA_RS12250 IPR017918 Nitrogen regulatory protein PII, conserved site YPA_RS12255 IPR000132 Nitrilase/cyanide hydratase, conserved site YPA_RS12255 IPR003010 Carbon-nitrogen hydrolase YPA_RS12255 IPR003694 NAD(+) synthetase YPA_RS12255 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPA_RS12255 IPR022310 NAD/GMP synthase YPA_RS12260 IPR001789 Signal transduction response regulator, receiver domain YPA_RS12260 IPR002078 RNA polymerase sigma factor 54 interaction domain YPA_RS12260 IPR003593 AAA+ ATPase domain YPA_RS12260 IPR009057 Homeodomain-like YPA_RS12260 IPR011006 CheY-like superfamily YPA_RS12260 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YPA_RS12260 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPA_RS12260 IPR025944 Sigma-54 interaction domain, conserved site YPA_RS12260 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS12265 IPR025262 Quorum-sensing regulator protein G YPA_RS12270 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPA_RS12270 IPR003660 HAMP linker domain YPA_RS12270 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPA_RS12270 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPA_RS12275 IPR002686 Transposase IS200-like YPA_RS12295 IPR010073 Phosphoribosylformylglycinamidine synthase YPA_RS12295 IPR010918 AIR synthase-related protein, C-terminal domain YPA_RS12295 IPR016188 PurM, N-terminal-like YPA_RS12295 IPR029062 Class I glutamine amidotransferase-like YPA_RS12300 IPR000189 Prokaryotic transglycosylase, active site YPA_RS12300 IPR001638 Extracellular solute-binding protein, family 3 YPA_RS12300 IPR008258 Lytic transglycosylase-like SLT domain YPA_RS12300 IPR023346 Lysozyme-like domain YPA_RS12300 IPR023703 Membrane-bound lytic murein transglycosylase F YPA_RS12305 IPR016192 APOBEC/CMP deaminase, zinc-binding YPA_RS12305 IPR016193 Cytidine deaminase-like YPA_RS12305 IPR028883 tRNA-specific adenosine deaminase YPA_RS12310 IPR006435 HAD-superfamily hydrolase, subfamily IF, YfhB YPA_RS12310 IPR023214 HAD-like domain YPA_RS12315 IPR001347 Sugar isomerase (SIS) YPA_RS12315 IPR005486 Glucokinase regulatory protein, conserved site YPA_RS12315 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ YPA_RS12315 IPR009060 UBA-like YPA_RS12320 IPR000281 Helix-turn-helix protein RpiR YPA_RS12320 IPR001347 Sugar isomerase (SIS) YPA_RS12320 IPR009057 Homeodomain-like YPA_RS12320 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS12325 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPA_RS12325 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPA_RS12330 IPR002686 Transposase IS200-like YPA_RS12340 IPR002582 Holo-[acyl carrier protein] synthase YPA_RS12340 IPR004568 Phosphopantethiene-protein transferase domain YPA_RS12340 IPR008278 4'-phosphopantetheinyl transferase superfamily YPA_RS12345 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ YPA_RS12345 IPR013785 Aldolase-type TIM barrel YPA_RS12350 IPR001270 ClpA/B family YPA_RS12350 IPR002611 IstB-like ATP-binding protein YPA_RS12350 IPR003593 AAA+ ATPase domain YPA_RS12350 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS12350 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS12355 IPR001584 Integrase, catalytic core YPA_RS12355 IPR006120 Resolvase, HTH domain YPA_RS12355 IPR009057 Homeodomain-like YPA_RS12355 IPR012337 Ribonuclease H-like domain YPA_RS12360 IPR002509 Polysaccharide deacetylase YPA_RS12360 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YPA_RS12365 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain YPA_RS12370 IPR000515 MetI-like domain YPA_RS12375 IPR000644 CBS domain YPA_RS12375 IPR003439 ABC transporter-like YPA_RS12375 IPR003593 AAA+ ATPase domain YPA_RS12375 IPR005892 Glycine betaine transport ATP-binding subunit YPA_RS12375 IPR017871 ABC transporter, conserved site YPA_RS12375 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS12380 IPR000358 Ribonucleotide reductase small subunit YPA_RS12380 IPR009078 Ferritin-like superfamily YPA_RS12380 IPR012348 Ribonucleotide reductase-related YPA_RS12380 IPR026494 Ribonucleoside reductase subunit beta, NrdF YPA_RS12380 IPR030475 YPA_RS12380 YPA_RS12385 IPR000788 Ribonucleotide reductase large subunit, C-terminal YPA_RS12385 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal YPA_RS12385 IPR013346 Ribonucleotide reductase, class I , alpha subunit YPA_RS12385 IPR013509 Ribonucleotide reductase large subunit, N-terminal YPA_RS12385 IPR013554 Ribonucleotide reductase N-terminal YPA_RS12385 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE YPA_RS12390 IPR004465 Ribonucleotide reductase Class Ib, NrdI YPA_RS12390 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial YPA_RS12390 IPR029039 Flavoprotein-like YPA_RS12395 IPR002109 Glutaredoxin YPA_RS12395 IPR011909 Glutaredoxin-like protein NrdH YPA_RS12395 IPR012336 Thioredoxin-like fold YPA_RS12400 IPR009435 Acid shock YPA_RS12400 IPR023497 Acid shock protein YPA_RS12405 IPR018994 Protein of unknown function DUF2002 YPA_RS12410 IPR001207 Transposase, mutator type YPA_RS12415 IPR018994 Protein of unknown function DUF2002 YPA_RS12420 IPR009587 Protein of unknown function DUF1198 YPA_RS12425 IPR006983 MbeD/MobD-like YPA_RS12430 IPR002059 Cold-shock protein, DNA-binding YPA_RS12430 IPR011129 Cold shock protein YPA_RS12430 IPR012156 Cold shock, CspA YPA_RS12430 IPR012340 Nucleic acid-binding, OB-fold YPA_RS12430 IPR019844 Cold-shock conserved site YPA_RS12435 IPR000914 Bacterial extracellular solute-binding protein, family 5 YPA_RS12435 IPR030678 YPA_RS12435 YPA_RS12440 IPR000515 MetI-like domain YPA_RS12445 IPR000515 MetI-like domain YPA_RS12450 IPR003439 ABC transporter-like YPA_RS12450 IPR003593 AAA+ ATPase domain YPA_RS12450 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS12455 IPR003439 ABC transporter-like YPA_RS12455 IPR003593 AAA+ ATPase domain YPA_RS12455 IPR017871 ABC transporter, conserved site YPA_RS12455 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS12460 IPR002026 Urease, gamma/gamma-beta subunit YPA_RS12460 IPR012010 Urease, gamma subunit YPA_RS12465 IPR002019 Urease, beta subunit YPA_RS12470 IPR005848 Urease, alpha subunit YPA_RS12470 IPR006680 Amidohydrolase 1 YPA_RS12470 IPR011059 Metal-dependent hydrolase, composite domain YPA_RS12470 IPR011612 Urease alpha-subunit, N-terminal domain YPA_RS12470 IPR017950 Urease active site YPA_RS12470 IPR029754 Urease nickel binding site YPA_RS12470 IPR032466 YPA_RS12470 YPA_RS12475 IPR004029 UreE urease accessory, N-terminal YPA_RS12475 IPR007864 Urease accessory protein UreE, C-terminal domain YPA_RS12475 IPR012406 Urease accessory protein UreE YPA_RS12480 IPR002639 Urease accessory protein UreF YPA_RS12485 IPR003495 CobW/HypB/UreG domain YPA_RS12485 IPR004400 Urease accessory protein UreG YPA_RS12485 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS12490 IPR002669 Urease accessory protein UreD YPA_RS12495 IPR004937 Urea transporter YPA_RS12495 IPR017807 Urea transporter, bacteria YPA_RS12495 IPR029020 Ammonium/urea transporter YPA_RS12500 IPR004688 Nickel/cobalt transporter, high-affinity, bacteria YPA_RS12500 IPR011541 Nickel/cobalt transporter, high-affinity YPA_RS12505 IPR010486 HNS-dependent expression A/B YPA_RS12505 IPR024972 HNS-dependent expression A YPA_RS12505 IPR028623 HNS-dependent expression B YPA_RS12515 IPR003148 Regulator of K+ conductance, N-terminal YPA_RS12515 IPR013099 Two pore domain potassium channel domain YPA_RS12515 IPR016040 NAD(P)-binding domain YPA_RS12520 IPR003691 Putative fluoride ion transporter CrcB YPA_RS12525 IPR003691 Putative fluoride ion transporter CrcB YPA_RS12535 IPR003501 Phosphotransferase system, EIIB component, type 2/3 YPA_RS12540 IPR003352 Phosphotransferase system, EIIC YPA_RS12540 IPR004501 Phosphotransferase system, EIIC component, type 3 YPA_RS12540 IPR004796 Phosphotransferase system, cellobiose-type IIC component YPA_RS12545 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit YPA_RS12550 IPR009057 Homeodomain-like YPA_RS12550 IPR011051 RmlC-like cupin domain YPA_RS12550 IPR013096 Cupin 2, conserved barrel YPA_RS12550 IPR014710 RmlC-like jelly roll fold YPA_RS12550 IPR018060 DNA binding HTH domain, AraC-type YPA_RS12550 IPR018062 HTH domain AraC-type, conserved site YPA_RS12550 IPR020449 Transcription regulator HTH, AraC- type YPA_RS12555 IPR002509 Polysaccharide deacetylase YPA_RS12555 IPR006879 Uncharacterised protein family UPF0249/HpnK YPA_RS12555 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YPA_RS12555 IPR022948 Uncharacterised protein family UPF0249 YPA_RS12575 IPR005621 Regulation modulator SeqA YPA_RS12575 IPR010985 Ribbon-helix-helix YPA_RS12575 IPR013321 Arc-type ribbon-helix-helix YPA_RS12575 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain YPA_RS12580 IPR005843 Alpha-D-phosphohexomutase, C-terminal YPA_RS12580 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I YPA_RS12580 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II YPA_RS12580 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III YPA_RS12580 IPR005852 Phosphoglucomutase, alpha-D-glucose specific YPA_RS12580 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III YPA_RS12580 IPR016066 Alpha-D-phosphohexomutase, conserved site YPA_RS12595 IPR000620 Drug/metabolite transporter YPA_RS12600 IPR001789 Signal transduction response regulator, receiver domain YPA_RS12600 IPR001867 Signal transduction response regulator, C-terminal YPA_RS12600 IPR011006 CheY-like superfamily YPA_RS12600 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS12605 IPR003018 GAF domain YPA_RS12605 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPA_RS12605 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPA_RS12605 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal YPA_RS12605 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPA_RS12605 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPA_RS12605 IPR025201 Sensor protein KdpD, transmembrane domain YPA_RS12605 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS12605 IPR029016 GAF domain-like YPA_RS12610 IPR003820 Potassium-transporting ATPase C chain YPA_RS12615 IPR001757 Cation-transporting P-type ATPase YPA_RS12615 IPR006391 Potassium-transporting P-type ATPase, B chain, subfamily IA YPA_RS12615 IPR008250 P-type ATPase, A domain YPA_RS12615 IPR018303 P-type ATPase, phosphorylation site YPA_RS12615 IPR023214 HAD-like domain YPA_RS12615 IPR023299 P-type ATPase, cytoplasmic domain N YPA_RS12620 IPR004623 Potassium-transporting ATPase A chain YPA_RS12625 IPR011726 K+ transporting P-type ATPase, F subunit YPA_RS12635 IPR019663 Uncharacterised protein YbfA YPA_RS12640 IPR013560 Domain of unknown function DUF1722 YPA_RS12645 IPR002081 Cryptochrome/DNA photolyase, class 1 YPA_RS12645 IPR005101 DNA photolyase, FAD-binding/Cryptochrome, C-terminal YPA_RS12645 IPR006050 DNA photolyase, N-terminal YPA_RS12645 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPA_RS12645 IPR018394 Cryptochrome/DNA photolyase, class 1 conserved site, C-terminal YPA_RS12650 IPR000396 Cyclic-AMP phosphodiesterase, class-II YPA_RS12650 IPR001279 Beta-lactamase-like YPA_RS12650 IPR024225 Cyclic-AMP phosphodiesterase class-II, conserved site YPA_RS12655 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 YPA_RS12665 IPR003778 Allophanate hydrolase subunit 2 YPA_RS12665 IPR029000 Cyclophilin-like domain YPA_RS12670 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF YPA_RS12670 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YPA_RS12675 IPR010374 Protein of unknown function DUF969 YPA_RS12685 IPR000816 Peptidase C15, pyroglutamyl peptidase I YPA_RS12685 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like YPA_RS12685 IPR029762 Pyroglutamyl peptidase I, bacterial-type YPA_RS12690 IPR002043 Uracil-DNA glycosylase YPA_RS12690 IPR005122 Uracil-DNA glycosylase-like YPA_RS12690 IPR018085 Uracil-DNA glycosylase, active site YPA_RS12695 IPR001150 Glycine radical domain YPA_RS12695 IPR011140 Autonomous glycyl radical cofactor GrcA YPA_RS12695 IPR019777 Formate C-acetyltransferase glycine radical, conserved site YPA_RS12700 IPR024499 Protein of unknown function DUF2974 YPA_RS12700 IPR029058 Alpha/Beta hydrolase fold YPA_RS12710 IPR002110 Ankyrin repeat YPA_RS12710 IPR020683 Ankyrin repeat-containing domain YPA_RS12715 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site YPA_RS12715 IPR001650 Helicase, C-terminal YPA_RS12715 IPR011545 DEAD/DEAH box helicase domain YPA_RS12715 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YPA_RS12715 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS12715 IPR028621 ATP-dependent RNA helicase SrmB YPA_RS12720 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPA_RS12720 IPR007848 Methyltransferase small domain YPA_RS12720 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase YPA_RS12720 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPA_RS12725 IPR003953 FAD binding domain YPA_RS12725 IPR005288 L-aspartate oxidase YPA_RS12725 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal YPA_RS12725 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPA_RS12725 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain YPA_RS12730 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site YPA_RS12730 IPR007627 RNA polymerase sigma-70 region 2 YPA_RS12730 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS12730 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 YPA_RS12730 IPR013324 RNA polymerase sigma factor, region 3/4 YPA_RS12730 IPR013325 RNA polymerase sigma factor, region 2 YPA_RS12730 IPR014284 RNA polymerase sigma-70 like domain YPA_RS12730 IPR014286 RNA polymerase sigma-70 RpoE type YPA_RS12735 IPR005572 Anti sigma-E protein RseA, N-terminal YPA_RS12735 IPR005573 Anti sigma-E protein RseA, C-terminal YPA_RS12735 IPR026279 Sigma-E factor negative regulatory protein RseA YPA_RS12740 IPR005588 MucB/RseB YPA_RS12740 IPR033434 YPA_RS12740 YPA_RS12740 IPR033436 YPA_RS12740 YPA_RS12745 IPR007359 Positive regulator of sigma(E), RseC/MucC YPA_RS12745 IPR026268 Protein RseC YPA_RS12755 IPR000640 Translation elongation factor EFG, V domain YPA_RS12755 IPR000795 Elongation factor, GTP-binding domain YPA_RS12755 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 YPA_RS12755 IPR005225 Small GTP-binding protein domain YPA_RS12755 IPR006297 Elongation factor 4 YPA_RS12755 IPR009022 Elongation factor G, III-V domain YPA_RS12755 IPR013842 GTP-binding protein LepA, C-terminal YPA_RS12755 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS12755 IPR031157 YPA_RS12755 YPA_RS12760 IPR000223 Peptidase S26A, signal peptidase I YPA_RS12760 IPR015927 Peptidase S24/S26A/S26B/S26C YPA_RS12760 IPR019533 Peptidase S26 YPA_RS12760 IPR019756 Peptidase S26A, signal peptidase I, serine active site YPA_RS12760 IPR019757 Peptidase S26A, signal peptidase I, lysine active site YPA_RS12760 IPR019758 Peptidase S26A, signal peptidase I, conserved site YPA_RS12760 IPR019759 Peptidase S24/S26A/S26B YPA_RS12760 IPR019766 Peptidase S26A, all-beta subdomain YPA_RS12760 IPR028360 Peptidase S24/S26, beta-ribbon domain YPA_RS12765 IPR000999 Ribonuclease III domain YPA_RS12765 IPR011907 Ribonuclease III YPA_RS12765 IPR014720 Double-stranded RNA-binding domain YPA_RS12770 IPR004044 K Homology domain, type 2 YPA_RS12770 IPR005225 Small GTP-binding protein domain YPA_RS12770 IPR005662 GTP-binding protein Era YPA_RS12770 IPR006073 GTP binding domain YPA_RS12770 IPR009019 K homology domain, prokaryotic type YPA_RS12770 IPR015946 K homology domain-like, alpha/beta YPA_RS12770 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS12775 IPR003717 Recombination protein O, RecO YPA_RS12775 IPR012340 Nucleic acid-binding, OB-fold YPA_RS12775 IPR022572 DNA replication/recombination mediator RecO, N-terminal YPA_RS12780 IPR001584 Integrase, catalytic core YPA_RS12780 IPR006120 Resolvase, HTH domain YPA_RS12780 IPR009057 Homeodomain-like YPA_RS12780 IPR012337 Ribonuclease H-like domain YPA_RS12785 IPR001270 ClpA/B family YPA_RS12785 IPR002611 IstB-like ATP-binding protein YPA_RS12785 IPR003593 AAA+ ATPase domain YPA_RS12785 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS12785 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS12790 IPR023109 Integrase/recombinase, N-terminal YPA_RS12790 IPR025166 Domain of unknown function DUF4102 YPA_RS12795 IPR002514 Transposase IS3/IS911family YPA_RS12795 IPR009057 Homeodomain-like YPA_RS12810 IPR000073 Alpha/beta hydrolase fold-1 YPA_RS12810 IPR029058 Alpha/Beta hydrolase fold YPA_RS12820 IPR002145 Ribbon-helix-helix protein, copG YPA_RS12825 IPR001226 Flavodoxin, conserved site YPA_RS12825 IPR008254 Flavodoxin/nitric oxide synthase YPA_RS12825 IPR010086 Flavodoxin, long chain YPA_RS12825 IPR029039 Flavoprotein-like YPA_RS12830 IPR002481 Ferric-uptake regulator YPA_RS12830 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS12840 IPR005318 Outer membrane porin, bacterial YPA_RS12840 IPR023614 Porin domain YPA_RS12845 IPR000924 Glutamyl/glutaminyl-tRNA synthetase YPA_RS12845 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPA_RS12845 IPR004514 Glutamine-tRNA synthetase YPA_RS12845 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain YPA_RS12845 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPA_RS12845 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain YPA_RS12845 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain YPA_RS12845 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain YPA_RS12845 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain YPA_RS12845 IPR022861 Glutamine-tRNA ligase, bacterial YPA_RS12850 IPR002686 Transposase IS200-like YPA_RS12860 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 YPA_RS12860 IPR001996 Phosphotransferase system, IIB component, type 1 YPA_RS12860 IPR003352 Phosphotransferase system, EIIC YPA_RS12860 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component YPA_RS12860 IPR011055 Duplicated hybrid motif YPA_RS12860 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site YPA_RS12865 IPR004547 Glucosamine-6-phosphate isomerase YPA_RS12865 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase YPA_RS12865 IPR018321 Glucosamine-6-phosphate isomerase, conserved site YPA_RS12870 IPR003764 N-acetylglucosamine-6-phosphate deacetylase YPA_RS12870 IPR006680 Amidohydrolase 1 YPA_RS12870 IPR011059 Metal-dependent hydrolase, composite domain YPA_RS12870 IPR032466 YPA_RS12870 YPA_RS12875 IPR000600 ROK YPA_RS12875 IPR000835 MarR-type HTH domain YPA_RS12875 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS12880 IPR006357 HAD-superfamily hydrolase, subfamily IIA YPA_RS12880 IPR023214 HAD-like domain YPA_RS12880 IPR023215 Nitrophenylphosphatase-like domain YPA_RS12885 IPR001962 Asparagine synthase YPA_RS12885 IPR006426 Asparagine synthase, glutamine-hydrolyzing YPA_RS12885 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPA_RS12885 IPR017932 Glutamine amidotransferase type 2 domain YPA_RS12885 IPR029055 Nucleophile aminohydrolases, N-terminal YPA_RS12925 IPR002938 Monooxygenase, FAD-binding YPA_RS12925 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 YPA_RS12925 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPA_RS12930 IPR002792 TRAM domain YPA_RS12930 IPR005839 Methylthiotransferase YPA_RS12930 IPR006463 tRNA-i(6)A37 modification enzyme MiaB YPA_RS12930 IPR006638 Elongator protein 3/MiaB/NifB YPA_RS12930 IPR007197 Radical SAM YPA_RS12930 IPR013848 Methylthiotransferase, N-terminal YPA_RS12930 IPR020612 Methylthiotransferase, conserved site YPA_RS12930 IPR023404 Radical SAM, alpha/beta horseshoe YPA_RS12930 IPR023970 Methylthiotransferase/radical SAM-type protein YPA_RS12935 IPR003714 PhoH-like protein YPA_RS12935 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS12940 IPR002036 Endoribonuclease YbeY YPA_RS12940 IPR020549 Endoribonuclease YbeY, conserved site YPA_RS12940 IPR023091 Metalloprotease catalytic domain, predicted YPA_RS12945 IPR000644 CBS domain YPA_RS12945 IPR005170 Transporter-associated domain YPA_RS12945 IPR016166 FAD-binding, type 2 YPA_RS12945 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 YPA_RS12950 IPR003010 Carbon-nitrogen hydrolase YPA_RS12950 IPR004563 Apolipoprotein N-acyltransferase YPA_RS12955 IPR001638 Extracellular solute-binding protein, family 3 YPA_RS12960 IPR000515 MetI-like domain YPA_RS12960 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family YPA_RS12960 IPR030202 YPA_RS12960 YPA_RS12965 IPR000515 MetI-like domain YPA_RS12965 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family YPA_RS12965 IPR030205 YPA_RS12965 YPA_RS12970 IPR003439 ABC transporter-like YPA_RS12970 IPR003593 AAA+ ATPase domain YPA_RS12970 IPR017871 ABC transporter, conserved site YPA_RS12970 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS12970 IPR030206 YPA_RS12970 YPA_RS12970 IPR030679 YPA_RS12970 YPA_RS12975 IPR009912 Protein of unknown function DUF1451 YPA_RS12980 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPA_RS12980 IPR002300 Aminoacyl-tRNA synthetase, class Ia YPA_RS12980 IPR002302 Leucine-tRNA ligase YPA_RS12980 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain YPA_RS12980 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding YPA_RS12980 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding YPA_RS12980 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPA_RS12980 IPR025709 Leucyl-tRNA synthetase, editing domain YPA_RS12985 IPR007485 Lipopolysaccharide assembly, LptE YPA_RS12990 IPR005790 DNA polymerase III, delta subunit YPA_RS12990 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal YPA_RS12990 IPR010372 DNA polymerase III, delta YPA_RS12990 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS12990 IPR032780 YPA_RS12990 YPA_RS12995 IPR004821 Cytidyltransferase-like domain YPA_RS12995 IPR005248 Probable nicotinate-nucleotide adenylyltransferase YPA_RS12995 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPA_RS13000 IPR004394 Protein Iojap/ribosomal silencing factor RsfS YPA_RS13005 IPR003742 SPOUT methyltransferase, predicted YPA_RS13005 IPR016051 Ribosomal RNA large subunit methyltransferase H YPA_RS13005 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPA_RS13005 IPR029028 Alpha/beta knot methyltransferases YPA_RS13010 IPR001460 Penicillin-binding protein, transpeptidase YPA_RS13010 IPR005311 Penicillin-binding protein, dimerisation domain YPA_RS13010 IPR012338 Beta-lactamase/transpeptidase-like YPA_RS13010 IPR017790 Penicillin-binding protein 2 YPA_RS13015 IPR001182 Cell cycle protein FtsW/RodA YPA_RS13015 IPR011923 Rod shape-determining protein RodA YPA_RS13015 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site YPA_RS13020 IPR007730 Sporulation-related domain YPA_RS13020 IPR009009 RlpA-like double-psi beta-barrel domain YPA_RS13020 IPR012997 Rare lipoprotein A, bacterial YPA_RS13025 IPR001584 Integrase, catalytic core YPA_RS13025 IPR006120 Resolvase, HTH domain YPA_RS13025 IPR009057 Homeodomain-like YPA_RS13025 IPR012337 Ribonuclease H-like domain YPA_RS13030 IPR001270 ClpA/B family YPA_RS13030 IPR002611 IstB-like ATP-binding protein YPA_RS13030 IPR003593 AAA+ ATPase domain YPA_RS13030 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS13030 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS13035 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal YPA_RS13035 IPR012338 Beta-lactamase/transpeptidase-like YPA_RS13035 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal YPA_RS13035 IPR015956 Penicillin-binding protein-associated YPA_RS13035 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A YPA_RS13040 IPR007454 Uncharacterised protein family UPF0250 YPA_RS13040 IPR027471 YbeD-like domain YPA_RS13045 IPR000544 Octanoyltransferase YPA_RS13045 IPR004143 Biotin/lipoate A/B protein ligase YPA_RS13045 IPR020605 Octanoyltransferase, conserved site YPA_RS13050 IPR003698 Lipoyl synthase YPA_RS13050 IPR006638 Elongator protein 3/MiaB/NifB YPA_RS13050 IPR007197 Radical SAM YPA_RS13050 IPR013785 Aldolase-type TIM barrel YPA_RS13050 IPR031691 YPA_RS13050 YPA_RS13055 IPR003369 Sec-independent protein translocase protein TatA/B/E YPA_RS13055 IPR006312 Sec-independent protein translocase protein TatA/E YPA_RS13055 IPR024905 Sec-independent protein translocase protein TatE YPA_RS13065 IPR003691 Putative fluoride ion transporter CrcB YPA_RS13070 IPR002059 Cold-shock protein, DNA-binding YPA_RS13070 IPR011129 Cold shock protein YPA_RS13070 IPR012156 Cold shock, CspA YPA_RS13070 IPR012340 Nucleic acid-binding, OB-fold YPA_RS13070 IPR019844 Cold-shock conserved site YPA_RS13075 IPR002059 Cold-shock protein, DNA-binding YPA_RS13075 IPR012340 Nucleic acid-binding, OB-fold YPA_RS13080 IPR000792 Transcription regulator LuxR, C-terminal YPA_RS13080 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS13080 IPR016032 Signal transduction response regulator, C-terminal effector YPA_RS13095 IPR009052 DNA polymerase III-theta, bacterial YPA_RS13095 IPR011326 Homologue of theta DNA polymerase III YPA_RS13095 IPR015065 Glycogen synthesis protein YPA_RS13100 IPR007138 Antibiotic biosynthesis monooxygenase-like domain YPA_RS13100 IPR011008 Dimeric alpha-beta barrel YPA_RS13105 IPR003439 ABC transporter-like YPA_RS13105 IPR003593 AAA+ ATPase domain YPA_RS13105 IPR011527 ABC transporter type 1, transmembrane domain YPA_RS13105 IPR017871 ABC transporter, conserved site YPA_RS13105 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS13115 IPR011051 RmlC-like cupin domain YPA_RS13115 IPR014710 RmlC-like jelly roll fold YPA_RS13115 IPR021120 KduI/IolB isomerase YPA_RS13115 IPR024203 5-deoxy-glucuronate isomerase, IolB YPA_RS13120 IPR013022 Xylose isomerase-like, TIM barrel domain YPA_RS13120 IPR030823 YPA_RS13120 YPA_RS13130 IPR000683 Oxidoreductase, N-terminal YPA_RS13130 IPR004104 Oxidoreductase, C-terminal YPA_RS13130 IPR016040 NAD(P)-binding domain YPA_RS13135 IPR001851 ABC transporter, permease YPA_RS13140 IPR003439 ABC transporter-like YPA_RS13140 IPR003593 AAA+ ATPase domain YPA_RS13140 IPR017871 ABC transporter, conserved site YPA_RS13140 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS13145 IPR025997 Periplasmic binding protein domain YPA_RS13145 IPR028082 Periplasmic binding protein-like I YPA_RS13155 IPR000399 TPP-binding enzyme, conserved site YPA_RS13155 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YPA_RS13155 IPR012000 Thiamine pyrophosphate enzyme, central domain YPA_RS13155 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain YPA_RS13155 IPR029035 DHS-like NAD/FAD-binding domain YPA_RS13155 IPR029061 Thiamin diphosphate-binding fold YPA_RS13155 IPR030817 YPA_RS13155 YPA_RS13160 IPR010061 Methylmalonate-semialdehyde dehydrogenase YPA_RS13160 IPR015590 Aldehyde dehydrogenase domain YPA_RS13160 IPR016160 Aldehyde dehydrogenase, cysteine active site YPA_RS13160 IPR016161 Aldehyde/histidinol dehydrogenase YPA_RS13160 IPR016162 Aldehyde dehydrogenase, N-terminal YPA_RS13160 IPR016163 Aldehyde dehydrogenase, C-terminal YPA_RS13165 IPR000281 Helix-turn-helix protein RpiR YPA_RS13165 IPR001347 Sugar isomerase (SIS) YPA_RS13165 IPR009057 Homeodomain-like YPA_RS13165 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS13175 IPR009898 Protein of unknown function DUF1440 YPA_RS13180 IPR001599 Alpha-2-macroglobulin YPA_RS13180 IPR002890 Alpha-2-macroglobulin, N-terminal YPA_RS13180 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid YPA_RS13180 IPR011625 Alpha-2-macroglobulin, N-terminal 2 YPA_RS13180 IPR021868 Alpha-2-macroglobulin MG1 domain YPA_RS13185 IPR001264 Glycosyl transferase, family 51 YPA_RS13185 IPR023346 Lysozyme-like domain YPA_RS13190 IPR001207 Transposase, mutator type YPA_RS13195 IPR001460 Penicillin-binding protein, transpeptidase YPA_RS13195 IPR009647 Penicillin-binding, C-terminal YPA_RS13195 IPR011815 Penicillin-binding protein 1C YPA_RS13195 IPR012338 Beta-lactamase/transpeptidase-like YPA_RS13200 IPR010982 Lambda repressor-like, DNA-binding domain YPA_RS13210 IPR010665 Protein of unknown function DUF1240 YPA_RS13215 IPR010665 Protein of unknown function DUF1240 YPA_RS13220 IPR008514 Type VI secretion system effector, Hcp YPA_RS13235 IPR003991 Pertactin virulence factor family YPA_RS13235 IPR004899 Pertactin, central region YPA_RS13235 IPR005546 Autotransporter beta-domain YPA_RS13235 IPR006315 Outer membrane autotransporter barrel YPA_RS13235 IPR011050 Pectin lyase fold/virulence factor YPA_RS13235 IPR012332 P22 tailspike C-terminal domain-like YPA_RS13240 IPR021561 Protein of unknown function DUF2893 YPA_RS13240 IPR033455 YPA_RS13240 YPA_RS13250 IPR001207 Transposase, mutator type YPA_RS13255 IPR018677 Protein of unknown function DUF2157, membrane YPA_RS13255 IPR025513 Domain of unknown function DUF4401 YPA_RS13260 IPR025833 GDYXXLXY protein YPA_RS13265 IPR001764 Glycoside hydrolase, family 3, N-terminal YPA_RS13265 IPR002772 Glycoside hydrolase family 3 C-terminal domain YPA_RS13265 IPR017853 Glycoside hydrolase, superfamily YPA_RS13265 IPR019800 Glycoside hydrolase, family 3, active site YPA_RS13265 IPR026891 Fibronectin type III-like domain YPA_RS13265 IPR026892 Glycoside hydrolase family 3 YPA_RS13285 IPR001395 Aldo/keto reductase YPA_RS13285 IPR018170 Aldo/keto reductase, conserved site YPA_RS13285 IPR020471 Aldo/keto reductase subgroup YPA_RS13285 IPR023210 NADP-dependent oxidoreductase domain YPA_RS13290 IPR001395 Aldo/keto reductase YPA_RS13290 IPR023210 NADP-dependent oxidoreductase domain YPA_RS13295 IPR000847 Transcription regulator HTH, LysR YPA_RS13295 IPR005119 LysR, substrate-binding YPA_RS13295 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS13300 IPR001584 Integrase, catalytic core YPA_RS13300 IPR006120 Resolvase, HTH domain YPA_RS13300 IPR009057 Homeodomain-like YPA_RS13300 IPR012337 Ribonuclease H-like domain YPA_RS13305 IPR001270 ClpA/B family YPA_RS13305 IPR002611 IstB-like ATP-binding protein YPA_RS13305 IPR003593 AAA+ ATPase domain YPA_RS13305 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS13305 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS13320 IPR000340 Dual specificity phosphatase, catalytic domain YPA_RS13320 IPR003595 Protein-tyrosine phosphatase, catalytic YPA_RS13320 IPR020422 Dual specificity phosphatase, subgroup, catalytic domain YPA_RS13320 IPR024950 Dual specificity phosphatase YPA_RS13320 IPR026841 YPA_RS13320 YPA_RS13320 IPR029021 Protein-tyrosine phosphatase-like YPA_RS13325 IPR022742 Putative lysophospholipase YPA_RS13325 IPR022744 Methyltransferase domain, putative YPA_RS13325 IPR029058 Alpha/Beta hydrolase fold YPA_RS13325 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPA_RS13330 IPR002123 Phospholipid/glycerol acyltransferase YPA_RS13335 IPR000374 Phosphatidate cytidylyltransferase YPA_RS13340 IPR000462 CDP-alcohol phosphatidyltransferase YPA_RS13375 IPR010260 Bacteriophage P4, Orf88 YPA_RS13385 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase YPA_RS13385 IPR016040 NAD(P)-binding domain YPA_RS13385 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain YPA_RS13385 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain YPA_RS13385 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site YPA_RS13390 IPR002942 RNA-binding S4 domain YPA_RS13395 IPR002686 Transposase IS200-like YPA_RS13405 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding YPA_RS13405 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPA_RS13405 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR YPA_RS13405 IPR015803 Cysteine-tRNA ligase YPA_RS13405 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase YPA_RS13405 IPR032678 YPA_RS13405 YPA_RS13410 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain YPA_RS13410 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site YPA_RS13410 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase YPA_RS13410 IPR029000 Cyclophilin-like domain YPA_RS13415 IPR004843 Calcineurin-like phosphoesterase domain, apaH type YPA_RS13415 IPR010138 UDP-2,3-diacylglucosamine hydrolase YPA_RS13415 IPR029052 Metallo-dependent phosphatase-like YPA_RS13420 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain YPA_RS13420 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE YPA_RS13425 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type YPA_RS13425 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit YPA_RS13425 IPR011054 Rudiment single hybrid motif YPA_RS13425 IPR013816 ATP-grasp fold, subdomain 2 YPA_RS13425 IPR016185 Pre-ATP-grasp domain YPA_RS13430 IPR003838 Permease FtsX-like YPA_RS13435 IPR003439 ABC transporter-like YPA_RS13435 IPR003593 AAA+ ATPase domain YPA_RS13435 IPR017871 ABC transporter, conserved site YPA_RS13435 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS13440 IPR008265 Lipase, GDSL, active site YPA_RS13440 IPR013830 YPA_RS13440 YPA_RS13445 IPR002347 Glucose/ribitol dehydrogenase YPA_RS13445 IPR016040 NAD(P)-binding domain YPA_RS13445 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPA_RS13450 IPR005746 Thioredoxin YPA_RS13450 IPR011990 Tetratricopeptide-like helical domain YPA_RS13450 IPR012336 Thioredoxin-like fold YPA_RS13450 IPR013766 Thioredoxin domain YPA_RS13455 IPR001107 Band 7 protein YPA_RS13455 IPR001972 Stomatin family YPA_RS13455 IPR018080 Band 7/stomatin-like, conserved site YPA_RS13460 IPR002810 NfeD-like, C-terminal domain YPA_RS13460 IPR012340 Nucleic acid-binding, OB-fold YPA_RS13465 IPR000551 MerR-type HTH domain YPA_RS13465 IPR009061 DNA binding domain, putative YPA_RS13465 IPR011789 Cu(I)-responsive transcriptional regulator YPA_RS13470 IPR001757 Cation-transporting P-type ATPase YPA_RS13470 IPR006121 Heavy metal-associated domain, HMA YPA_RS13470 IPR008250 P-type ATPase, A domain YPA_RS13470 IPR017969 Heavy-metal-associated, conserved site YPA_RS13470 IPR018303 P-type ATPase, phosphorylation site YPA_RS13470 IPR023214 HAD-like domain YPA_RS13470 IPR023299 P-type ATPase, cytoplasmic domain N YPA_RS13470 IPR027256 Cation-transporting P-type ATPase, subfamily IB YPA_RS13475 IPR002816 Pheromone shutdown, TraB YPA_RS13480 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC YPA_RS13480 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain YPA_RS13495 IPR006179 5'-Nucleotidase/apyrase YPA_RS13495 IPR008334 5'-Nucleotidase, C-terminal YPA_RS13500 IPR004843 Calcineurin-like phosphoesterase domain, apaH type YPA_RS13500 IPR006146 5'-Nucleotidase, conserved site YPA_RS13500 IPR006179 5'-Nucleotidase/apyrase YPA_RS13500 IPR029052 Metallo-dependent phosphatase-like YPA_RS13505 IPR006146 5'-Nucleotidase, conserved site YPA_RS13505 IPR006179 5'-Nucleotidase/apyrase YPA_RS13505 IPR029052 Metallo-dependent phosphatase-like YPA_RS13510 IPR011701 Major facilitator superfamily YPA_RS13510 IPR020846 Major facilitator superfamily domain YPA_RS13515 IPR003148 Regulator of K+ conductance, N-terminal YPA_RS13515 IPR004771 K+/H+ exchanger YPA_RS13515 IPR006153 Cation/H+ exchanger YPA_RS13515 IPR016040 NAD(P)-binding domain YPA_RS13520 IPR011611 Carbohydrate kinase PfkB YPA_RS13520 IPR029056 Ribokinase-like YPA_RS13525 IPR003856 Lipopolysaccharide biosynthesis YPA_RS13530 IPR005841 Alpha-D-phosphohexomutase superfamily YPA_RS13530 IPR005843 Alpha-D-phosphohexomutase, C-terminal YPA_RS13530 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I YPA_RS13530 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II YPA_RS13530 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III YPA_RS13530 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III YPA_RS13530 IPR016066 Alpha-D-phosphohexomutase, conserved site YPA_RS13535 IPR001173 Glycosyltransferase 2-like YPA_RS13535 IPR029044 Nucleotide-diphospho-sugar transferases YPA_RS13540 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal YPA_RS13540 IPR005835 Nucleotidyl transferase YPA_RS13540 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YPA_RS13540 IPR011051 RmlC-like cupin domain YPA_RS13540 IPR014710 RmlC-like jelly roll fold YPA_RS13540 IPR029044 Nucleotide-diphospho-sugar transferases YPA_RS13545 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain YPA_RS13545 IPR016040 NAD(P)-binding domain YPA_RS13545 IPR028614 GDP-L-fucose synthase YPA_RS13555 IPR001296 Glycosyl transferase, family 1 YPA_RS13555 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain YPA_RS13570 IPR001173 Glycosyltransferase 2-like YPA_RS13570 IPR029044 Nucleotide-diphospho-sugar transferases YPA_RS13580 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPA_RS13585 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain YPA_RS13585 IPR016040 NAD(P)-binding domain YPA_RS13590 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase YPA_RS13590 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPA_RS13590 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPA_RS13590 IPR015424 Pyridoxal phosphate-dependent transferase YPA_RS13595 IPR013445 CDP-glucose 4,6-dehydratase YPA_RS13595 IPR016040 NAD(P)-binding domain YPA_RS13600 IPR016040 NAD(P)-binding domain YPA_RS13605 IPR005835 Nucleotidyl transferase YPA_RS13605 IPR013446 Glucose-1-phosphate cytidylyltransferase YPA_RS13605 IPR029044 Nucleotide-diphospho-sugar transferases YPA_RS13610 IPR001041 2Fe-2S ferredoxin-type domain YPA_RS13610 IPR001221 Phenol hydroxylase reductase YPA_RS13610 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPA_RS13610 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site YPA_RS13610 IPR008333 Oxidoreductase, FAD-binding domain YPA_RS13610 IPR012675 Beta-grasp domain YPA_RS13610 IPR017938 Riboflavin synthase-like beta-barrel YPA_RS13615 IPR001015 Ferrochelatase YPA_RS13615 IPR019772 Ferrochelatase, active site YPA_RS13620 IPR000850 Adenylate kinase/UMP-CMP kinase YPA_RS13620 IPR006259 Adenylate kinase subfamily YPA_RS13620 IPR007862 Adenylate kinase, active site lid domain YPA_RS13620 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS13625 IPR001404 Heat shock protein Hsp90 family YPA_RS13625 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPA_RS13625 IPR019805 Heat shock protein Hsp90, conserved site YPA_RS13625 IPR020568 Ribosomal protein S5 domain 2-type fold YPA_RS13625 IPR020575 Heat shock protein Hsp90, N-terminal YPA_RS13630 IPR000093 DNA recombination protein RecR YPA_RS13630 IPR006171 Toprim domain YPA_RS13630 IPR015967 Recombination protein RecR, conserved site YPA_RS13630 IPR023627 Recombination protein RecR YPA_RS13630 IPR023628 Recombination protein RecR, C4-type zinc finger YPA_RS13635 IPR004401 Nucleoid-associated protein YbaB YPA_RS13640 IPR001270 ClpA/B family YPA_RS13640 IPR003593 AAA+ ATPase domain YPA_RS13640 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal YPA_RS13640 IPR012763 DNA polymerase III, subunit gamma/ tau YPA_RS13640 IPR021029 DNA polymerase III, tau subunit, domain V YPA_RS13640 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV YPA_RS13640 IPR022754 DNA polymerase III, gamma subunit, domain III YPA_RS13640 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS13645 IPR000836 Phosphoribosyltransferase domain YPA_RS13645 IPR005764 Adenine phosphoribosyl transferase YPA_RS13645 IPR029057 Phosphoribosyltransferase-like YPA_RS13655 IPR010890 Primosomal replication PriB/PriC YPA_RS13660 IPR019630 Protein of unknown function DUF2496, YbaM-related YPA_RS13665 IPR006685 Mechanosensitive ion channel MscS YPA_RS13665 IPR006686 Mechanosensitive ion channel MscS, conserved site YPA_RS13665 IPR010920 Like-Sm (LSM) domain YPA_RS13665 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 YPA_RS13665 IPR011066 Mechanosensitive ion channel MscS, C-terminal YPA_RS13665 IPR025692 Mechanosensitive ion channel inner membrane domain 1 YPA_RS13670 IPR001584 Integrase, catalytic core YPA_RS13670 IPR006120 Resolvase, HTH domain YPA_RS13670 IPR009057 Homeodomain-like YPA_RS13670 IPR012337 Ribonuclease H-like domain YPA_RS13675 IPR001270 ClpA/B family YPA_RS13675 IPR002611 IstB-like ATP-binding protein YPA_RS13675 IPR003593 AAA+ ATPase domain YPA_RS13675 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS13675 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS13680 IPR024393 Mechanosensitive ion channel MscS, porin domain YPA_RS13680 IPR025692 Mechanosensitive ion channel inner membrane domain 1 YPA_RS13685 IPR003787 Sulphur relay, DsrE/F-like protein YPA_RS13685 IPR027396 DsrEFH-like YPA_RS13690 IPR001647 DNA-binding HTH domain, TetR-type YPA_RS13690 IPR009057 Homeodomain-like YPA_RS13690 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal YPA_RS13690 IPR013572 Transcription regulator MAATS, C-terminal YPA_RS13690 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal YPA_RS13690 IPR023772 DNA-binding HTH domain, TetR-type, conserved site YPA_RS13695 IPR006143 RND efflux pump, membrane fusion protein YPA_RS13695 IPR032317 YPA_RS13695 YPA_RS13700 IPR001036 Acriflavin resistance protein YPA_RS13700 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 YPA_RS13700 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPA_RS13705 IPR002150 Ribosomal protein L31 YPA_RS13705 IPR027493 Ribosomal protein L31 type B YPA_RS13710 IPR000473 Ribosomal protein L36 YPA_RS13720 IPR019693 Biofilm formation regulator YbaJ YPA_RS13725 IPR007985 Haemolysin expression modulating, HHA YPA_RS13730 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS13730 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding YPA_RS13740 IPR003703 Acyl-CoA thioesterase YPA_RS13740 IPR029069 HotDog domain YPA_RS13745 IPR001905 Ammonium transporter YPA_RS13745 IPR018047 Ammonium transporter, conserved site YPA_RS13745 IPR024041 Ammonium transporter AmtB-like domain YPA_RS13745 IPR029020 Ammonium/urea transporter YPA_RS13750 IPR002187 Nitrogen regulatory protein PII YPA_RS13750 IPR002332 Nitrogen regulatory protein P-II, urydylation site YPA_RS13750 IPR011322 Nitrogen regulatory PII-like, alpha/beta YPA_RS13750 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal YPA_RS13750 IPR017918 Nitrogen regulatory protein PII, conserved site YPA_RS13755 IPR003439 ABC transporter-like YPA_RS13755 IPR003593 AAA+ ATPase domain YPA_RS13755 IPR011527 ABC transporter type 1, transmembrane domain YPA_RS13755 IPR017871 ABC transporter, conserved site YPA_RS13755 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS13760 IPR003439 ABC transporter-like YPA_RS13760 IPR003593 AAA+ ATPase domain YPA_RS13760 IPR011527 ABC transporter type 1, transmembrane domain YPA_RS13760 IPR017871 ABC transporter, conserved site YPA_RS13760 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS13765 IPR000485 AsnC-type HTH domain YPA_RS13765 IPR011008 Dimeric alpha-beta barrel YPA_RS13765 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS13765 IPR019887 Transcription regulator AsnC-type, C-terminal YPA_RS13765 IPR019888 Transcription regulator AsnC-type YPA_RS13770 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPA_RS13775 IPR000150 Cof protein YPA_RS13775 IPR006379 HAD-superfamily hydrolase, subfamily IIB YPA_RS13775 IPR023214 HAD-like domain YPA_RS13775 IPR023938 HMP-PP phosphatase YPA_RS13780 IPR000914 Bacterial extracellular solute-binding protein, family 5 YPA_RS13780 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain YPA_RS13785 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPA_RS13785 IPR018317 Queuosine biosynthesis protein QueC YPA_RS13790 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family YPA_RS13790 IPR029069 HotDog domain YPA_RS13795 IPR004509 Competence protein ComEA, helix-hairpin-helix domain YPA_RS13795 IPR010994 RuvA domain 2-like YPA_RS13800 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type YPA_RS13800 IPR008880 Trigger factor, C-terminal domain YPA_RS13800 IPR027304 Trigger factor/SurA domain YPA_RS13805 IPR000119 Histone-like bacterial DNA-binding protein YPA_RS13805 IPR010992 Integration host factor (IHF)-like DNA-binding domain YPA_RS13805 IPR020816 Histone-like DNA-binding protein, conserved site YPA_RS13810 IPR003111 Peptidase S16, lon N-terminal YPA_RS13810 IPR003593 AAA+ ATPase domain YPA_RS13810 IPR003959 ATPase, AAA-type, core YPA_RS13810 IPR004815 Lon protease, bacterial/eukaryotic-type YPA_RS13810 IPR008268 Peptidase S16, active site YPA_RS13810 IPR008269 Peptidase S16, Lon C-terminal YPA_RS13810 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPA_RS13810 IPR015947 PUA-like domain YPA_RS13810 IPR020568 Ribosomal protein S5 domain 2-type fold YPA_RS13810 IPR027065 Lon protease YPA_RS13810 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS13810 IPR027543 Lon protease, bacterial YPA_RS13815 IPR003593 AAA+ ATPase domain YPA_RS13815 IPR003959 ATPase, AAA-type, core YPA_RS13815 IPR004487 Clp protease, ATP-binding subunit ClpX YPA_RS13815 IPR010603 Zinc finger, ClpX C4-type YPA_RS13815 IPR019489 Clp ATPase, C-terminal YPA_RS13815 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS13820 IPR001907 ATP-dependent Clp protease proteolytic subunit YPA_RS13820 IPR018215 ClpP, active site YPA_RS13820 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA YPA_RS13820 IPR029045 ClpP/crotonase-like domain YPA_RS13820 IPR033135 YPA_RS13820 YPA_RS13825 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain YPA_RS13825 IPR005215 Trigger factor YPA_RS13825 IPR008880 Trigger factor, C-terminal domain YPA_RS13825 IPR008881 Trigger factor, ribosome-binding, bacterial YPA_RS13825 IPR027304 Trigger factor/SurA domain YPA_RS13835 IPR002634 BolA protein YPA_RS13840 IPR005619 Uncharacterised protein family, YajG YPA_RS13840 IPR012640 Membrane lipoprotein, lipid attachment site YPA_RS13845 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 YPA_RS13845 IPR011701 Major facilitator superfamily YPA_RS13845 IPR020846 Major facilitator superfamily domain YPA_RS13850 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like YPA_RS13860 IPR000883 Cytochrome c oxidase subunit I YPA_RS13860 IPR014207 Cytochrome o ubiquinol oxidase, subunit I YPA_RS13860 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site YPA_RS13860 IPR023616 Cytochrome c oxidase, subunit I domain YPA_RS13865 IPR000298 Cytochrome c oxidase subunit III domain YPA_RS13865 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle YPA_RS13865 IPR014206 Cytochrome o ubiquinol oxidase, subunit III YPA_RS13865 IPR024791 Cytochrome c oxidase subunit III YPA_RS13870 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes YPA_RS13870 IPR014210 Cytochrome o ubiquinol oxidase subunit IV YPA_RS13875 IPR000537 UbiA prenyltransferase family YPA_RS13875 IPR006369 Protohaem IX farnesyltransferase YPA_RS13875 IPR030470 YPA_RS13875 YPA_RS13880 IPR011701 Major facilitator superfamily YPA_RS13880 IPR020846 Major facilitator superfamily domain YPA_RS13885 IPR007551 Protein of unknown function DUF520 YPA_RS13890 IPR003710 Ketopantoate reductase ApbA/PanE YPA_RS13890 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YPA_RS13890 IPR013328 Dehydrogenase, multihelical YPA_RS13890 IPR013332 Ketopantoate reductase, N-terminal domain YPA_RS13890 IPR013752 Ketopantoate reductase, C-terminal domain YPA_RS13890 IPR016040 NAD(P)-binding domain YPA_RS13895 IPR002818 ThiJ/PfpI YPA_RS13895 IPR006287 DJ-1 YPA_RS13895 IPR029062 Class I glutamine amidotransferase-like YPA_RS13900 IPR001763 Rhodanese-like domain YPA_RS13900 IPR003720 tRNA sulfurtransferase ThiI YPA_RS13900 IPR004114 THUMP YPA_RS13900 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPA_RS13900 IPR020536 Thil, AANH domain YPA_RS13900 IPR026340 Thiazole biosynthesis domain YPA_RS13910 IPR003761 Exonuclease VII, small subunit YPA_RS13915 IPR000092 Polyprenyl synthetase YPA_RS13915 IPR008949 Terpenoid synthase YPA_RS13915 IPR017446 Polyprenyl synthetase-related YPA_RS13920 IPR005474 Transketolase, N-terminal YPA_RS13920 IPR005475 Transketolase-like, pyrimidine-binding domain YPA_RS13920 IPR005477 Deoxyxylulose-5-phosphate synthase YPA_RS13920 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II YPA_RS13920 IPR020826 Transketolase binding site YPA_RS13920 IPR029061 Thiamin diphosphate-binding fold YPA_RS13920 IPR033247 YPA_RS13920 YPA_RS13920 IPR033248 YPA_RS13920 YPA_RS13925 IPR002686 Transposase IS200-like YPA_RS13935 IPR007686 YutG/PgpA domain YPA_RS13935 IPR026037 Phosphatidylglycerophosphatase A YPA_RS13935 IPR027416 YutG-like domain YPA_RS13940 IPR006283 Thiamine-monophosphate kinase YPA_RS13940 IPR010918 AIR synthase-related protein, C-terminal domain YPA_RS13940 IPR016188 PurM, N-terminal-like YPA_RS13945 IPR006027 NusB/RsmB/TIM44 YPA_RS13945 IPR011605 NusB antitermination factor YPA_RS13950 IPR002180 6,7-dimethyl-8-ribityllumazine synthase YPA_RS13955 IPR002125 CMP/dCMP deaminase, zinc-binding YPA_RS13955 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal YPA_RS13955 IPR004794 Riboflavin biosynthesis protein RibD YPA_RS13955 IPR011549 Riboflavin-specific deaminase, C-terminal YPA_RS13955 IPR016192 APOBEC/CMP deaminase, zinc-binding YPA_RS13955 IPR016193 Cytidine deaminase-like YPA_RS13955 IPR024072 Dihydrofolate reductase-like domain YPA_RS13960 IPR003796 Ribonucleotide reductase regulator NrdR-like YPA_RS13960 IPR005144 ATP-cone YPA_RS13975 IPR002686 Transposase IS200-like YPA_RS13985 IPR002686 Transposase IS200-like YPA_RS13990 IPR005665 Protein-export membrane protein SecF, bacterial YPA_RS13990 IPR022645 Protein-export membrane protein SecD/SecF, bacterial YPA_RS13990 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site YPA_RS13990 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial YPA_RS13995 IPR005791 Protein translocase subunit SecD YPA_RS13995 IPR022645 Protein-export membrane protein SecD/SecF, bacterial YPA_RS13995 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site YPA_RS13995 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial YPA_RS13995 IPR027398 SecD export protein N-terminal TM domain YPA_RS14000 IPR003849 Preprotein translocase YajC YPA_RS14005 IPR002616 tRNA-guanine(15) transglycosylase-like YPA_RS14005 IPR004803 Queuine tRNA-ribosyltransferase YPA_RS14010 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA YPA_RS14015 IPR007431 Acyl carrier protein phosphodiesterase YPA_RS14015 IPR023491 Acyl carrier protein phosphodiesterase, gammaproteobacteria YPA_RS14020 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant YPA_RS14020 IPR012336 Thioredoxin-like fold YPA_RS14020 IPR019479 Peroxiredoxin, C-terminal YPA_RS14020 IPR024706 Peroxiredoxin, AhpC-type YPA_RS14030 IPR000101 Gamma-glutamyltranspeptidase YPA_RS14030 IPR029055 Nucleophile aminohydrolases, N-terminal YPA_RS14035 IPR000101 Gamma-glutamyltranspeptidase YPA_RS14035 IPR029055 Nucleophile aminohydrolases, N-terminal YPA_RS14040 IPR002347 Glucose/ribitol dehydrogenase YPA_RS14040 IPR016040 NAD(P)-binding domain YPA_RS14045 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain YPA_RS14045 IPR006047 Glycosyl hydrolase, family 13, catalytic domain YPA_RS14045 IPR013780 Glycosyl hydrolase, family 13, all-beta YPA_RS14045 IPR013781 Glycoside hydrolase, catalytic domain YPA_RS14045 IPR014756 Immunoglobulin E-set YPA_RS14045 IPR015902 Glycoside hydrolase, family 13 YPA_RS14045 IPR017069 Maltodextrin glucosidase YPA_RS14045 IPR017853 Glycoside hydrolase, superfamily YPA_RS14050 IPR002293 Amino acid/polyamine transporter I YPA_RS14050 IPR004840 Amino acid permease, conserved site YPA_RS14050 IPR004841 Amino acid permease/ SLC12A domain YPA_RS14055 IPR004685 Branched-chain amino acid transport system II carrier protein YPA_RS14060 IPR011862 Phosphate binding protein YPA_RS14060 IPR024370 PBP domain YPA_RS14065 IPR000014 PAS domain YPA_RS14065 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPA_RS14065 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPA_RS14065 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPA_RS14065 IPR013767 PAS fold YPA_RS14065 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR YPA_RS14065 IPR021766 Protein of unknown function DUF3329 YPA_RS14070 IPR001789 Signal transduction response regulator, receiver domain YPA_RS14070 IPR001867 Signal transduction response regulator, C-terminal YPA_RS14070 IPR011006 CheY-like superfamily YPA_RS14070 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB YPA_RS14070 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS14070 IPR016032 Signal transduction response regulator, C-terminal effector YPA_RS14080 IPR004593 Nuclease SbcCD subunit D YPA_RS14080 IPR004843 Calcineurin-like phosphoesterase domain, apaH type YPA_RS14080 IPR026843 Nuclease SbcCD subunit D, C-terminal domain YPA_RS14080 IPR029052 Metallo-dependent phosphatase-like YPA_RS14085 IPR027050 Nuclease SbcCD subunit C YPA_RS14085 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS14090 IPR001584 Integrase, catalytic core YPA_RS14090 IPR006120 Resolvase, HTH domain YPA_RS14090 IPR009057 Homeodomain-like YPA_RS14090 IPR012337 Ribonuclease H-like domain YPA_RS14095 IPR001270 ClpA/B family YPA_RS14095 IPR002611 IstB-like ATP-binding protein YPA_RS14095 IPR003593 AAA+ ATPase domain YPA_RS14095 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS14095 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS14100 IPR027050 Nuclease SbcCD subunit C YPA_RS14100 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS14105 IPR000600 ROK YPA_RS14110 IPR007476 Putative exonuclease, RdgC YPA_RS14115 IPR009664 Protein of unknown function DUF1255 YPA_RS14115 IPR011051 RmlC-like cupin domain YPA_RS14115 IPR014710 RmlC-like jelly roll fold YPA_RS14125 IPR000623 Shikimate kinase/Threonine synthase-like 1 YPA_RS14125 IPR023000 Shikimate kinase, conserved site YPA_RS14125 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS14125 IPR027544 Shikimate kinase 2 YPA_RS14125 IPR031322 YPA_RS14125 YPA_RS14130 IPR001737 Ribosomal RNA adenine methylase transferase YPA_RS14130 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPA_RS14140 IPR013216 Methyltransferase type 11 YPA_RS14140 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPA_RS14150 IPR009875 PilZ domain YPA_RS14150 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal YPA_RS14150 IPR012349 FMN-binding split barrel YPA_RS14150 IPR023787 Type III secretion system flagellar brake protein YcgR YPA_RS14155 IPR000965 Gamma-glutamyl phosphate reductase GPR YPA_RS14155 IPR012134 Glutamate-5-semialdehyde dehydrogenase YPA_RS14155 IPR015590 Aldehyde dehydrogenase domain YPA_RS14155 IPR016161 Aldehyde/histidinol dehydrogenase YPA_RS14155 IPR016162 Aldehyde dehydrogenase, N-terminal YPA_RS14155 IPR016163 Aldehyde dehydrogenase, C-terminal YPA_RS14155 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site YPA_RS14160 IPR001048 Aspartate/glutamate/uridylate kinase YPA_RS14160 IPR001057 Glutamate/acetylglutamate kinase YPA_RS14160 IPR002478 PUA domain YPA_RS14160 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase YPA_RS14160 IPR011529 Glutamate 5-kinase YPA_RS14160 IPR015947 PUA-like domain YPA_RS14160 IPR019797 Glutamate 5-kinase, conserved site YPA_RS14165 IPR009986 Sigma factor-binding protein Crl YPA_RS14170 IPR010520 Protein of unknown function DUF1100, hydrolase-like YPA_RS14170 IPR029058 Alpha/Beta hydrolase fold YPA_RS14175 IPR000836 Phosphoribosyltransferase domain YPA_RS14175 IPR023747 Xanthine-guanine phosphoribosyltransferase YPA_RS14175 IPR029057 Phosphoribosyltransferase-like YPA_RS14180 IPR032126 YPA_RS14180 YPA_RS14185 IPR000601 PKD domain YPA_RS14185 IPR004302 Chitin-binding, domain 3 YPA_RS14185 IPR014756 Immunoglobulin E-set YPA_RS14185 IPR022409 PKD/Chitinase domain YPA_RS14190 IPR005119 LysR, substrate-binding YPA_RS14190 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS14200 IPR001160 Peptidase M20C, Xaa-His dipeptidase YPA_RS14200 IPR002933 Peptidase M20 YPA_RS14200 IPR011650 Peptidase M20, dimerisation domain YPA_RS14205 IPR001126 DNA-repair protein, UmuC-like YPA_RS14205 IPR017961 DNA polymerase, Y-family, little finger domain YPA_RS14205 IPR022880 DNA polymerase IV YPA_RS14205 IPR024728 DNA polymerase type-Y, HhH motif YPA_RS14210 IPR004129 Glycerophosphoryl diester phosphodiesterase YPA_RS14210 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain YPA_RS14210 IPR030395 YPA_RS14210 YPA_RS14215 IPR007495 Protein of unknown function DUF539 YPA_RS14220 IPR003374 ApbE-like domain YPA_RS14220 IPR024932 Flavin transferase ApbE YPA_RS14225 IPR001041 2Fe-2S ferredoxin-type domain YPA_RS14225 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPA_RS14225 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase YPA_RS14225 IPR008333 Oxidoreductase, FAD-binding domain YPA_RS14225 IPR010205 NADH-quinone reductase, Na(+)-translocating, F subunit YPA_RS14225 IPR012675 Beta-grasp domain YPA_RS14225 IPR017938 Riboflavin synthase-like beta-barrel YPA_RS14230 IPR003667 Electron transport complex, Rnf/Nqr YPA_RS14230 IPR010967 NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit YPA_RS14235 IPR003667 Electron transport complex, Rnf/Nqr YPA_RS14235 IPR011292 NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit YPA_RS14240 IPR007329 FMN-binding YPA_RS14240 IPR010204 NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit YPA_RS14245 IPR004338 NADH-quinone reductase NQR2/RnfD YPA_RS14245 IPR010966 NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit YPA_RS14250 IPR008703 NADH-quinone reductase, Na(+)-translocating, subunit A YPA_RS14250 IPR022615 NADH-quinone reductase, Na(+)-translocating, subunit A, C-terminal YPA_RS14255 IPR005490 L,D-transpeptidase catalytic domain YPA_RS14260 IPR026869 Putative glutamine amidotransferase type 2 YPA_RS14260 IPR029055 Nucleophile aminohydrolases, N-terminal YPA_RS14265 IPR001347 Sugar isomerase (SIS) YPA_RS14265 IPR004515 Phosphoheptose isomerase YPA_RS14270 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal YPA_RS14270 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain YPA_RS14270 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal YPA_RS14270 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type YPA_RS14275 IPR004356 Adhesin operon regulatory protein YPA_RS14285 IPR006626 Parallel beta-helix repeat YPA_RS14285 IPR008638 Filamentous haemagglutinin, N-terminal YPA_RS14285 IPR011050 Pectin lyase fold/virulence factor YPA_RS14285 IPR012334 Pectin lyase fold YPA_RS14285 IPR024973 ESPR domain YPA_RS14290 IPR013686 Polypeptide-transport-associated, ShlB-type YPA_RS14295 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site YPA_RS14295 IPR002933 Peptidase M20 YPA_RS14295 IPR010158 Amidase, hydantoinase/carbamoylase YPA_RS14295 IPR011650 Peptidase M20, dimerisation domain YPA_RS14300 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPA_RS14300 IPR015424 Pyridoxal phosphate-dependent transferase YPA_RS14305 IPR001584 Integrase, catalytic core YPA_RS14305 IPR006120 Resolvase, HTH domain YPA_RS14305 IPR009057 Homeodomain-like YPA_RS14305 IPR012337 Ribonuclease H-like domain YPA_RS14310 IPR001270 ClpA/B family YPA_RS14310 IPR002611 IstB-like ATP-binding protein YPA_RS14310 IPR003593 AAA+ ATPase domain YPA_RS14310 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS14310 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS14315 IPR000192 Aminotransferase class V domain YPA_RS14315 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPA_RS14315 IPR015424 Pyridoxal phosphate-dependent transferase YPA_RS14320 IPR003439 ABC transporter-like YPA_RS14320 IPR003593 AAA+ ATPase domain YPA_RS14320 IPR017871 ABC transporter, conserved site YPA_RS14320 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS14320 IPR030679 YPA_RS14320 YPA_RS14325 IPR000515 MetI-like domain YPA_RS14325 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family YPA_RS14330 IPR000515 MetI-like domain YPA_RS14330 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family YPA_RS14335 IPR001638 Extracellular solute-binding protein, family 3 YPA_RS14335 IPR018313 Extracellular solute-binding protein, family 3, conserved site YPA_RS14345 IPR000281 Helix-turn-helix protein RpiR YPA_RS14345 IPR001347 Sugar isomerase (SIS) YPA_RS14345 IPR009057 Homeodomain-like YPA_RS14345 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS14350 IPR025148 Protein of unknown function DUF4089 YPA_RS14355 IPR000120 Amidase YPA_RS14355 IPR014087 Amidohydrolase, AtzE type YPA_RS14355 IPR023631 Amidase signature domain YPA_RS14360 IPR024507 Protein of unknown function DUF3225 YPA_RS14360 IPR032710 YPA_RS14360 YPA_RS14365 IPR011701 Major facilitator superfamily YPA_RS14365 IPR020846 Major facilitator superfamily domain YPA_RS14370 IPR011606 Branched-chain amino acid transport, permease YPA_RS14375 IPR008407 Branched-chain amino acid transport, AzlD YPA_RS14380 IPR000835 MarR-type HTH domain YPA_RS14380 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS14380 IPR023187 Transcriptional regulator MarR-type, conserved site YPA_RS14385 IPR005694 Efflux pump membrane protein Emr YPA_RS14385 IPR006143 RND efflux pump, membrane fusion protein YPA_RS14385 IPR032317 YPA_RS14385 YPA_RS14390 IPR004638 Drug resistance transporter EmrB/QacA subfamily YPA_RS14390 IPR011701 Major facilitator superfamily YPA_RS14390 IPR020846 Major facilitator superfamily domain YPA_RS14395 IPR001537 tRNA/rRNA methyltransferase, SpoU type YPA_RS14395 IPR013123 RNA 2-O ribose methyltransferase, substrate binding YPA_RS14395 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted YPA_RS14395 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPA_RS14395 IPR029028 Alpha/beta knot methyltransferases YPA_RS14395 IPR029064 50S ribosomal protein L30e-like YPA_RS14400 IPR005746 Thioredoxin YPA_RS14400 IPR012336 Thioredoxin-like fold YPA_RS14400 IPR013766 Thioredoxin domain YPA_RS14400 IPR017937 Thioredoxin, conserved site YPA_RS14405 IPR005636 DTW YPA_RS14410 IPR000182 GNAT domain YPA_RS14410 IPR003781 CoA-binding YPA_RS14410 IPR016040 NAD(P)-binding domain YPA_RS14410 IPR016102 Succinyl-CoA synthetase-like YPA_RS14410 IPR016181 Acyl-CoA N-acyltransferase YPA_RS14410 IPR032875 YPA_RS14410 YPA_RS14415 IPR001736 Phospholipase D/Transphosphatidylase YPA_RS14415 IPR016270 Phospholipase D, phosphatidylserine synthase type YPA_RS14415 IPR025202 Phospholipase D-like domain YPA_RS14420 IPR017028 Uncharacterised conserved protein UCP034456 YPA_RS14420 IPR018736 Protein of unknown function DUF2279, periplasmic lipoprotein YPA_RS14455 IPR001270 ClpA/B family YPA_RS14455 IPR003593 AAA+ ATPase domain YPA_RS14455 IPR003959 ATPase, AAA-type, core YPA_RS14455 IPR004176 Clp, N-terminal YPA_RS14455 IPR017730 Chaperonin ClpB YPA_RS14455 IPR018368 ClpA/B, conserved site 1 YPA_RS14455 IPR019489 Clp ATPase, C-terminal YPA_RS14455 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS14455 IPR028299 ClpA/B, conserved site 2 YPA_RS14460 IPR003730 Multi-copper polyphenol oxidoreductase, laccase YPA_RS14460 IPR011324 Cytotoxic necrotizing factor-like, catalytic YPA_RS14465 IPR002942 RNA-binding S4 domain YPA_RS14465 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F YPA_RS14465 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site YPA_RS14465 IPR006225 Pseudouridine synthase, RluC/RluD YPA_RS14465 IPR020103 Pseudouridine synthase, catalytic domain YPA_RS14470 IPR011990 Tetratricopeptide-like helical domain YPA_RS14470 IPR017689 Outer membrane protein assembly factor BamD YPA_RS14475 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein YPA_RS14480 IPR002686 Transposase IS200-like YPA_RS14490 IPR002686 Transposase IS200-like YPA_RS14500 IPR001086 Prephenate dehydratase YPA_RS14500 IPR002701 Chorismate mutase YPA_RS14500 IPR010952 Chorismate mutase, gammaproteobacteria YPA_RS14500 IPR020822 Chorismate mutase, type II YPA_RS14505 IPR001584 Integrase, catalytic core YPA_RS14505 IPR006120 Resolvase, HTH domain YPA_RS14505 IPR009057 Homeodomain-like YPA_RS14505 IPR012337 Ribonuclease H-like domain YPA_RS14510 IPR001270 ClpA/B family YPA_RS14510 IPR002611 IstB-like ATP-binding protein YPA_RS14510 IPR003593 AAA+ ATPase domain YPA_RS14510 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS14510 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS14515 IPR000878 Tetrapyrrole methylase YPA_RS14515 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site YPA_RS14515 IPR006366 Uroporphyrin-III C-methyltransferase YPA_RS14515 IPR014776 Tetrapyrrole methylase, subdomain 2 YPA_RS14515 IPR014777 Tetrapyrrole methylase, subdomain 1 YPA_RS14515 IPR019478 Sirohaem synthase, dimerisation domain YPA_RS14520 IPR002500 Phosphoadenosine phosphosulphate reductase YPA_RS14520 IPR011784 Sulphate adenylyltransferase, small subunit YPA_RS14520 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPA_RS14525 IPR000795 Elongation factor, GTP-binding domain YPA_RS14525 IPR005225 Small GTP-binding protein domain YPA_RS14525 IPR009000 Translation protein, beta-barrel domain YPA_RS14525 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal YPA_RS14525 IPR011779 Sulphate adenylyltransferase, large subunit YPA_RS14525 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS14525 IPR031157 YPA_RS14525 YPA_RS14530 IPR002891 Adenylylsulphate kinase YPA_RS14530 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS14535 IPR022721 Protein of unknown function DUF3561 YPA_RS14540 IPR007060 Septum formation initiator FtsL/DivIC YPA_RS14540 IPR023081 Cell division protein FtsB YPA_RS14545 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YPA_RS14545 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site YPA_RS14545 IPR029044 Nucleotide-diphospho-sugar transferases YPA_RS14550 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YPA_RS14550 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site YPA_RS14555 IPR001656 Pseudouridine synthase, TruD YPA_RS14555 IPR020103 Pseudouridine synthase, catalytic domain YPA_RS14555 IPR020119 Pseudouridine synthase TruD, conserved site YPA_RS14560 IPR002828 Survival protein SurE-like phosphatase/nucleotidase YPA_RS14560 IPR030048 YPA_RS14560 YPA_RS14565 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase YPA_RS14565 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPA_RS14570 IPR011055 Duplicated hybrid motif YPA_RS14570 IPR016047 Peptidase M23 YPA_RS14570 IPR018392 LysM domain YPA_RS14575 IPR000943 RNA polymerase sigma-70 YPA_RS14575 IPR007624 RNA polymerase sigma-70 region 3 YPA_RS14575 IPR007627 RNA polymerase sigma-70 region 2 YPA_RS14575 IPR007630 RNA polymerase sigma-70 region 4 YPA_RS14575 IPR009042 RNA polymerase sigma-70 region 1.2 YPA_RS14575 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS14575 IPR012761 RNA polymerase sigma factor RpoS YPA_RS14575 IPR013324 RNA polymerase sigma factor, region 3/4 YPA_RS14575 IPR013325 RNA polymerase sigma factor, region 2 YPA_RS14575 IPR014284 RNA polymerase sigma-70 like domain YPA_RS14580 IPR000432 DNA mismatch repair protein MutS, C-terminal YPA_RS14580 IPR005748 DNA mismatch repair protein MutS, type 1 YPA_RS14580 IPR007695 DNA mismatch repair protein MutS-like, N-terminal YPA_RS14580 IPR007696 DNA mismatch repair protein MutS, core YPA_RS14580 IPR007860 DNA mismatch repair protein MutS, connector domain YPA_RS14580 IPR007861 DNA mismatch repair protein MutS, clamp YPA_RS14580 IPR016151 DNA mismatch repair protein MutS, N-terminal YPA_RS14580 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS14590 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family YPA_RS14590 IPR004785 Ribose 5-phosphate isomerase B YPA_RS14595 IPR002085 Alcohol dehydrogenase superfamily, zinc-type YPA_RS14595 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site YPA_RS14595 IPR011032 GroES (chaperonin 10)-like YPA_RS14595 IPR013149 Alcohol dehydrogenase, C-terminal YPA_RS14595 IPR013154 Alcohol dehydrogenase GroES-like YPA_RS14595 IPR016040 NAD(P)-binding domain YPA_RS14595 IPR020843 Polyketide synthase, enoylreductase YPA_RS14600 IPR002347 Glucose/ribitol dehydrogenase YPA_RS14600 IPR016040 NAD(P)-binding domain YPA_RS14600 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPA_RS14605 IPR004006 Dak kinase YPA_RS14610 IPR004007 DhaL domain YPA_RS14610 IPR012737 Dihydroxyacetone kinase, subunit L YPA_RS14615 IPR007324 Sugar-binding domain, putative YPA_RS14615 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS14620 IPR000802 Arsenical pump membrane protein, ArsB YPA_RS14625 IPR001845 HTH ArsR-type DNA-binding domain YPA_RS14625 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS14630 IPR006793 FaeA-like protein YPA_RS14630 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS14640 IPR001638 Extracellular solute-binding protein, family 3 YPA_RS14645 IPR004852 Di-haem cytochrome c peroxidase YPA_RS14645 IPR009056 Cytochrome c-like domain YPA_RS14645 IPR025992 Haem-binding domain YPA_RS14655 IPR000531 TonB-dependent receptor, beta-barrel YPA_RS14655 IPR012910 TonB-dependent receptor, plug YPA_RS14660 IPR000531 TonB-dependent receptor, beta-barrel YPA_RS14665 IPR012927 ShET2 enterotoxin, N-terminal YPA_RS14675 IPR000994 Peptidase M24, structural domain YPA_RS14675 IPR001714 Peptidase M24, methionine aminopeptidase YPA_RS14675 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 YPA_RS14680 IPR021831 Protein of unknown function DUF3423 YPA_RS14685 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain YPA_RS14685 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain YPA_RS14685 IPR011167 Iron-dependent fumarate hydratase YPA_RS14685 IPR020557 Fumarate lyase, conserved site YPA_RS14690 IPR000577 YPA_RS14690 YPA_RS14690 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPA_RS14690 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPA_RS14695 IPR004560 L-ribulose-5-phosphate 3-epimerase YPA_RS14695 IPR013022 Xylose isomerase-like, TIM barrel domain YPA_RS14700 IPR001851 ABC transporter, permease YPA_RS14705 IPR001851 ABC transporter, permease YPA_RS14710 IPR003439 ABC transporter-like YPA_RS14710 IPR003593 AAA+ ATPase domain YPA_RS14710 IPR017871 ABC transporter, conserved site YPA_RS14710 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS14715 IPR002686 Transposase IS200-like YPA_RS14720 IPR025997 Periplasmic binding protein domain YPA_RS14720 IPR028082 Periplasmic binding protein-like I YPA_RS14725 IPR001034 HTH DeoR N-terminal domain YPA_RS14725 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS14725 IPR014036 DeoR C-terminal sensor domain YPA_RS14725 IPR018356 Transcription regulator, HTH DeoR-type, conserved site YPA_RS14730 IPR001303 Class II aldolase/adducin N-terminal YPA_RS14730 IPR004661 L-ribulose-5-phosphate 4-epimerase YPA_RS14735 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site YPA_RS14735 IPR006656 Molybdopterin oxidoreductase YPA_RS14735 IPR006657 Molydopterin dinucleotide-binding domain YPA_RS14735 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain YPA_RS14735 IPR009010 Aspartate decarboxylase-like domain YPA_RS14735 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE YPA_RS14735 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site YPA_RS14740 IPR014297 Dimethylsulphoxide reductase, chain B YPA_RS14740 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPA_RS14740 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPA_RS14745 IPR007059 DMSO reductase anchor subunit (DmsC) YPA_RS14750 IPR020945 DMSO/Nitrate reductase chaperone YPA_RS14750 IPR026269 Tat proofreading chaperone DmsD-type YPA_RS14750 IPR028611 Tat proofreading chaperone DmsD YPA_RS14755 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase YPA_RS14755 IPR016174 Di-haem cytochrome, transmembrane YPA_RS14760 IPR009155 Cytochrome b562 YPA_RS14760 IPR010980 Cytochrome c/b562 YPA_RS14765 IPR000763 Catalase-peroxidase haem YPA_RS14765 IPR002016 Haem peroxidase, plant/fungal/bacterial YPA_RS14765 IPR010255 Haem peroxidase YPA_RS14765 IPR019793 Peroxidases heam-ligand binding site YPA_RS14765 IPR019794 Peroxidase, active site YPA_RS14770 IPR025997 Periplasmic binding protein domain YPA_RS14770 IPR028082 Periplasmic binding protein-like I YPA_RS14775 IPR014582 Uncharacterised conserved protein UCP033535, periplasmic lipoprotein YPA_RS14780 IPR003439 ABC transporter-like YPA_RS14780 IPR003593 AAA+ ATPase domain YPA_RS14780 IPR017871 ABC transporter, conserved site YPA_RS14780 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS14785 IPR001851 ABC transporter, permease YPA_RS14790 IPR005474 Transketolase, N-terminal YPA_RS14790 IPR029061 Thiamin diphosphate-binding fold YPA_RS14790 IPR033247 YPA_RS14790 YPA_RS14795 IPR005475 Transketolase-like, pyrimidine-binding domain YPA_RS14795 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II YPA_RS14795 IPR029061 Thiamin diphosphate-binding fold YPA_RS14795 IPR033247 YPA_RS14795 YPA_RS14795 IPR033248 YPA_RS14795 YPA_RS14800 IPR000577 YPA_RS14800 YPA_RS14800 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPA_RS14800 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPA_RS14805 IPR009015 L-fucose isomerase, N-terminal/central domain YPA_RS14805 IPR015888 L-fucose isomerase, C-terminal YPA_RS14810 IPR000835 MarR-type HTH domain YPA_RS14810 IPR007324 Sugar-binding domain, putative YPA_RS14810 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS14815 IPR011701 Major facilitator superfamily YPA_RS14815 IPR020846 Major facilitator superfamily domain YPA_RS14820 IPR008136 CinA, C-terminal YPA_RS14825 IPR003593 AAA+ ATPase domain YPA_RS14825 IPR013765 DNA recombination and repair protein RecA YPA_RS14825 IPR020584 DNA recombination/repair protein RecA, conserved site YPA_RS14825 IPR023400 DNA recombination and repair protein RecA, C-terminal YPA_RS14825 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS14830 IPR003783 Regulatory protein RecX YPA_RS14830 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS14835 IPR002318 Alanine-tRNA ligase, class IIc YPA_RS14835 IPR009000 Translation protein, beta-barrel domain YPA_RS14835 IPR012947 Threonyl/alanyl tRNA synthetase, SAD YPA_RS14835 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain YPA_RS14835 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain YPA_RS14835 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal YPA_RS14835 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria YPA_RS14840 IPR006439 HAD hydrolase, subfamily IA YPA_RS14840 IPR010976 Beta-phosphoglucomutase hydrolase YPA_RS14840 IPR023198 Phosphoglycolate phosphatase, domain 2 YPA_RS14840 IPR023214 HAD-like domain YPA_RS14845 IPR020143 Uncharacterised protein family, RP436 YPA_RS14845 IPR032818 YPA_RS14845 YPA_RS14850 IPR006334 Glutamate--cysteine ligase, monofunctional YPA_RS14850 IPR007370 Glutamate--cysteine ligase YPA_RS14855 IPR003815 S-ribosylhomocysteinase (LuxS) YPA_RS14855 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like YPA_RS14865 IPR002686 Transposase IS200-like YPA_RS14870 IPR000644 CBS domain YPA_RS14870 IPR002550 Domain of unknown function DUF21 YPA_RS14870 IPR005170 Transporter-associated domain YPA_RS14870 IPR016166 FAD-binding, type 2 YPA_RS14870 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 YPA_RS14875 IPR002541 Cytochrome c assembly protein YPA_RS14880 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain YPA_RS14880 IPR003593 AAA+ ATPase domain YPA_RS14880 IPR004125 Signal recognition particle, SRP54 subunit, M-domain YPA_RS14880 IPR004780 Signal recognition particle protein Ffh YPA_RS14880 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle YPA_RS14880 IPR022941 Signal recognition particle, SRP54 subunit YPA_RS14880 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS14885 IPR000307 Ribosomal protein S16 YPA_RS14885 IPR020592 Ribosomal protein S16, conserved site YPA_RS14885 IPR023803 Ribosomal protein S16 domain YPA_RS14890 IPR002676 RimM protein YPA_RS14890 IPR009000 Translation protein, beta-barrel domain YPA_RS14890 IPR011033 PRC-barrel-like YPA_RS14890 IPR011961 16S rRNA processing protein RimM YPA_RS14890 IPR027275 PRC-barrel domain YPA_RS14895 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria YPA_RS14895 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain YPA_RS14895 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal YPA_RS14895 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPA_RS14895 IPR029028 Alpha/beta knot methyltransferases YPA_RS14900 IPR001857 Ribosomal protein L19 YPA_RS14900 IPR008991 Translation protein SH3-like domain YPA_RS14900 IPR018257 Ribosomal protein L19, conserved site YPA_RS14905 IPR002686 Transposase IS200-like YPA_RS14910 IPR007433 Protein of unknown function DUF481 YPA_RS14915 IPR004668 Anaerobic c4-dicarboxylate membrane transporter YPA_RS14920 IPR004668 Anaerobic c4-dicarboxylate membrane transporter YPA_RS14925 IPR004668 Anaerobic c4-dicarboxylate membrane transporter YPA_RS14930 IPR001789 Signal transduction response regulator, receiver domain YPA_RS14930 IPR007492 LytTR DNA-binding domain YPA_RS14930 IPR011006 CheY-like superfamily YPA_RS14935 IPR006218 DAHP synthetase I/KDSA YPA_RS14935 IPR006219 DHAP synthase, class 1 YPA_RS14935 IPR013785 Aldolase-type TIM barrel YPA_RS14940 IPR002701 Chorismate mutase YPA_RS14940 IPR003099 Prephenate dehydrogenase YPA_RS14940 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein YPA_RS14940 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YPA_RS14940 IPR011277 Chorismate mutase, T-protein YPA_RS14940 IPR016040 NAD(P)-binding domain YPA_RS14940 IPR020822 Chorismate mutase, type II YPA_RS14945 IPR001086 Prephenate dehydratase YPA_RS14945 IPR018528 Prephenate dehydratase, conserved site YPA_RS14950 IPR001270 ClpA/B family YPA_RS14950 IPR002611 IstB-like ATP-binding protein YPA_RS14950 IPR003593 AAA+ ATPase domain YPA_RS14950 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS14950 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS14955 IPR001584 Integrase, catalytic core YPA_RS14955 IPR006120 Resolvase, HTH domain YPA_RS14955 IPR009057 Homeodomain-like YPA_RS14955 IPR012337 Ribonuclease H-like domain YPA_RS14960 IPR006367 Sirohaem synthase, N-terminal YPA_RS14960 IPR016040 NAD(P)-binding domain YPA_RS14960 IPR019478 Sirohaem synthase, dimerisation domain YPA_RS14960 IPR028281 Siroheme synthase, central domain YPA_RS14970 IPR012933 HicA mRNA interferase family YPA_RS14975 IPR013321 Arc-type ribbon-helix-helix YPA_RS14975 IPR031807 YPA_RS14975 YPA_RS14985 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain YPA_RS14985 IPR006066 Nitrite/sulphite reductase iron-sulphur/siroheam-binding site YPA_RS14985 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain YPA_RS14985 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit YPA_RS14990 IPR001094 Flavodoxin YPA_RS14990 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPA_RS14990 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase YPA_RS14990 IPR003097 FAD-binding, type 1 YPA_RS14990 IPR008254 Flavodoxin/nitric oxide synthase YPA_RS14990 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain YPA_RS14990 IPR017938 Riboflavin synthase-like beta-barrel YPA_RS14990 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3 YPA_RS14990 IPR029039 Flavoprotein-like YPA_RS14990 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria YPA_RS14995 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein YPA_RS15000 IPR007197 Radical SAM YPA_RS15000 IPR013785 Aldolase-type TIM barrel YPA_RS15000 IPR024924 7-carboxy-7-deazaguanine synthase-like YPA_RS15000 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria YPA_RS15005 IPR001424 Superoxide dismutase, copper/zinc binding domain YPA_RS15005 IPR018152 Superoxide dismutase, copper/zinc, binding site YPA_RS15005 IPR024134 YPA_RS15005 YPA_RS15010 IPR000941 Enolase YPA_RS15010 IPR020809 Enolase, conserved site YPA_RS15010 IPR020810 Enolase, C-terminal YPA_RS15010 IPR020811 Enolase, N-terminal YPA_RS15010 IPR029017 Enolase N-terminal domain-like YPA_RS15010 IPR029065 Enolase C-terminal domain-like YPA_RS15015 IPR004468 CTP synthase YPA_RS15015 IPR017456 CTP synthase, N-terminal YPA_RS15015 IPR017926 Glutamine amidotransferase YPA_RS15015 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS15015 IPR029062 Class I glutamine amidotransferase-like YPA_RS15020 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core YPA_RS15020 IPR011551 NTP pyrophosphohydrolase MazG, bacterial YPA_RS15030 IPR002912 ACT domain YPA_RS15030 IPR003607 HD/PDEase domain YPA_RS15030 IPR004095 TGS YPA_RS15030 IPR004811 RelA/SpoT family YPA_RS15030 IPR007685 RelA/SpoT YPA_RS15030 IPR012675 Beta-grasp domain YPA_RS15030 IPR012676 TGS-like YPA_RS15035 IPR001789 Signal transduction response regulator, receiver domain YPA_RS15035 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPA_RS15035 IPR003660 HAMP linker domain YPA_RS15035 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPA_RS15035 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPA_RS15035 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain YPA_RS15035 IPR011006 CheY-like superfamily YPA_RS15035 IPR019247 Histidine kinase BarA, N-terminal YPA_RS15040 IPR001478 PDZ domain YPA_RS15040 IPR001940 Peptidase S1C YPA_RS15040 IPR009003 Trypsin-like cysteine/serine peptidase domain YPA_RS15040 IPR011782 Peptidase S1C, Do YPA_RS15045 IPR003607 HD/PDEase domain YPA_RS15045 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase YPA_RS15045 IPR006674 HD domain YPA_RS15045 IPR020779 Deoxyguanosinetriphosphate triphosphohydrolase, proteobacteria YPA_RS15045 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain YPA_RS15045 IPR026875 Phosphohydrolase-associated domain YPA_RS15045 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain YPA_RS15050 IPR000845 Nucleoside phosphorylase domain YPA_RS15050 IPR010049 MTA/SAH nucleosidase YPA_RS15050 IPR018017 Nucleoside phosphorylase YPA_RS15055 IPR002491 ABC transporter periplasmic binding domain YPA_RS15055 IPR023544 ABC transporter, vitamin B12-binding protein YPA_RS15060 IPR005115 Uncharacterised domain UPF0126 YPA_RS15065 IPR000361 FeS cluster biogenesis YPA_RS15065 IPR016092 FeS cluster insertion protein YPA_RS15065 IPR017870 FeS cluster insertion, C-terminal, conserved site YPA_RS15065 IPR023063 Iron-sulfur cluster insertion protein ErpA YPA_RS15070 IPR001807 Chloride channel, voltage gated YPA_RS15070 IPR014743 Chloride channel, core YPA_RS15070 IPR023861 Chloride channel, ClcA YPA_RS15075 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase YPA_RS15075 IPR005814 Aminotransferase class-III YPA_RS15075 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPA_RS15075 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPA_RS15075 IPR015424 Pyridoxal phosphate-dependent transferase YPA_RS15080 IPR000522 ABC transporter, permease protein YPA_RS15080 IPR029022 ABC transporter, BtuC-like YPA_RS15085 IPR002491 ABC transporter periplasmic binding domain YPA_RS15085 IPR008091 Ferrichrome-binding periplasmic protein YPA_RS15095 IPR003439 ABC transporter-like YPA_RS15095 IPR003593 AAA+ ATPase domain YPA_RS15095 IPR017871 ABC transporter, conserved site YPA_RS15095 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS15100 IPR001264 Glycosyl transferase, family 51 YPA_RS15100 IPR001460 Penicillin-binding protein, transpeptidase YPA_RS15100 IPR011813 Penicillin-binding protein 1B YPA_RS15100 IPR012338 Beta-lactamase/transpeptidase-like YPA_RS15100 IPR023346 Lysozyme-like domain YPA_RS15100 IPR028166 Bifunctional transglycosylase second domain YPA_RS15100 IPR032730 YPA_RS15100 YPA_RS15105 IPR001650 Helicase, C-terminal YPA_RS15105 IPR007502 Helicase-associated domain YPA_RS15105 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type YPA_RS15105 IPR011545 DEAD/DEAH box helicase domain YPA_RS15105 IPR013689 RNA helicase, ATP-dependent, HrpB type, C-terminal YPA_RS15105 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YPA_RS15105 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS15110 IPR004175 2',5' RNA ligase YPA_RS15110 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase YPA_RS15110 IPR014051 Phosphoesterase, HXTX YPA_RS15115 IPR005224 Sugar fermentation stimulation protein YPA_RS15120 IPR000962 Zinc finger, DksA/TraR C4-type YPA_RS15120 IPR012784 RNA polymerase-binding transcription factor DksA YPA_RS15120 IPR020458 Zinc finger, DksA/TraR C4-type conserved site YPA_RS15120 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria YPA_RS15125 IPR000924 Glutamyl/glutaminyl-tRNA synthetase YPA_RS15125 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPA_RS15125 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain YPA_RS15125 IPR022380 Glutamyl-Q tRNA(Asp) synthetase YPA_RS15130 IPR002646 Poly A polymerase, head domain YPA_RS15130 IPR010206 Poly(A) polymerase I YPA_RS15130 IPR025866 Polymerase A arginine-rich C-terminal domain YPA_RS15130 IPR032828 YPA_RS15130 YPA_RS15135 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK YPA_RS15140 IPR003700 Ketopantoate hydroxymethyltransferase YPA_RS15140 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain YPA_RS15145 IPR003721 Pantoate-beta-alanine ligase YPA_RS15145 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPA_RS15150 IPR003190 Aspartate decarboxylase YPA_RS15150 IPR009010 Aspartate decarboxylase-like domain YPA_RS15160 IPR000412 ABC-2 transporter YPA_RS15160 IPR013525 ABC-2 type transporter YPA_RS15165 IPR003439 ABC transporter-like YPA_RS15165 IPR003593 AAA+ ATPase domain YPA_RS15165 IPR017871 ABC transporter, conserved site YPA_RS15165 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS15170 IPR001765 Carbonic anhydrase YPA_RS15170 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site YPA_RS15175 IPR000836 Phosphoribosyltransferase domain YPA_RS15175 IPR005904 Hypoxanthine phosphoribosyl transferase YPA_RS15175 IPR029057 Phosphoribosyltransferase-like YPA_RS15180 IPR001117 Multicopper oxidase, type 1 YPA_RS15180 IPR002355 Multicopper oxidase, copper-binding site YPA_RS15180 IPR008972 Cupredoxin YPA_RS15180 IPR011706 Multicopper oxidase, type 2 YPA_RS15180 IPR011707 Multicopper oxidase, type 3 YPA_RS15180 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal YPA_RS15185 IPR019114 Chaperone lipoprotein, PulS/OutS-like YPA_RS15190 IPR001045 Spermidine/spermine synthases family YPA_RS15190 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPA_RS15190 IPR030373 YPA_RS15190 YPA_RS15195 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic YPA_RS15195 IPR009165 S-adenosylmethionine decarboxylase, bacterial YPA_RS15195 IPR016067 S-adenosylmethionine decarboxylase, core YPA_RS15200 IPR000620 Drug/metabolite transporter YPA_RS15205 IPR008249 Uncharacterised protein family UPF0231 YPA_RS15210 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha YPA_RS15210 IPR004406 Aconitase B, bacterial YPA_RS15210 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YPA_RS15210 IPR015929 Aconitase B, N-terminal, bacterial YPA_RS15210 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 YPA_RS15210 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 YPA_RS15210 IPR015933 Aconitase B, HEAT-like, bacterial YPA_RS15210 IPR015937 Aconitase/isopropylmalate dehydratase YPA_RS15210 IPR018136 Aconitase family, 4Fe-4S cluster binding site YPA_RS15215 IPR002686 Transposase IS200-like YPA_RS15225 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YPA_RS15225 IPR006258 Dihydrolipoamide dehydrogenase YPA_RS15225 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site YPA_RS15225 IPR016156 FAD/NAD-linked reductase, dimerisation domain YPA_RS15225 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPA_RS15230 IPR000089 Biotin/lipoyl attachment YPA_RS15230 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain YPA_RS15230 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site YPA_RS15230 IPR004167 E3 binding YPA_RS15230 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex YPA_RS15230 IPR011053 Single hybrid motif YPA_RS15230 IPR023213 Chloramphenicol acetyltransferase-like domain YPA_RS15235 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type YPA_RS15235 IPR005474 Transketolase, N-terminal YPA_RS15235 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II YPA_RS15235 IPR029061 Thiamin diphosphate-binding fold YPA_RS15235 IPR033247 YPA_RS15235 YPA_RS15240 IPR000524 Transcription regulator HTH, GntR YPA_RS15240 IPR008920 Transcription regulator FadR/GntR, C-terminal YPA_RS15240 IPR011711 GntR, C-terminal YPA_RS15240 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS15245 IPR002293 Amino acid/polyamine transporter I YPA_RS15245 IPR004840 Amino acid permease, conserved site YPA_RS15245 IPR004841 Amino acid permease/ SLC12A domain YPA_RS15250 IPR031347 YPA_RS15250 YPA_RS15255 IPR002502 N-acetylmuramoyl-L-alanine amidase domain YPA_RS15260 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal YPA_RS15260 IPR004393 Nicotinate-nucleotide pyrophosphorylase YPA_RS15260 IPR013785 Aldolase-type TIM barrel YPA_RS15260 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal YPA_RS15260 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD YPA_RS15265 IPR012902 Prokaryotic N-terminal methylation site YPA_RS15270 IPR001482 Type II secretion system protein E YPA_RS15270 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS15275 IPR001992 Type II secretion system conserved site YPA_RS15275 IPR003004 GspF/PilC family YPA_RS15275 IPR018076 Type II secretion system F domain YPA_RS15280 IPR001093 IMP dehydrogenase/GMP reductase YPA_RS15280 IPR005993 Guanosine monophosphate reductase 1 YPA_RS15280 IPR013785 Aldolase-type TIM barrel YPA_RS15280 IPR015875 IMP dehydrogenase / GMP reductase, conserved site YPA_RS15290 IPR001977 Dephospho-CoA kinase YPA_RS15290 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS15295 IPR009777 Cell division protein ZapD YPA_RS15295 IPR027462 Z ring-associated protein D, C-terminal domain YPA_RS15300 IPR005584 DNA gyrase inhibitor YacG YPA_RS15300 IPR013088 Zinc finger, NHR/GATA-type YPA_RS15305 IPR002686 Transposase IS200-like YPA_RS15310 IPR001584 Integrase, catalytic core YPA_RS15310 IPR006120 Resolvase, HTH domain YPA_RS15310 IPR009057 Homeodomain-like YPA_RS15310 IPR012337 Ribonuclease H-like domain YPA_RS15315 IPR001270 ClpA/B family YPA_RS15315 IPR002611 IstB-like ATP-binding protein YPA_RS15315 IPR003593 AAA+ ATPase domain YPA_RS15315 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS15315 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS15320 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPA_RS15325 IPR004919 Domain of unknown function DUF262 YPA_RS15325 IPR011089 Domain of unknown function DUF1524 YPA_RS15330 IPR002104 Integrase, catalytic YPA_RS15330 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPA_RS15330 IPR013762 Integrase-like, catalytic core YPA_RS15330 IPR023109 Integrase/recombinase, N-terminal YPA_RS15330 IPR025166 Domain of unknown function DUF4102 YPA_RS15340 IPR005495 Permease YjgP/YjgQ, predicted YPA_RS15340 IPR030923 YPA_RS15340 YPA_RS15345 IPR005495 Permease YjgP/YjgQ, predicted YPA_RS15345 IPR030922 YPA_RS15345 YPA_RS15350 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal YPA_RS15350 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal YPA_RS15350 IPR011356 Leucine aminopeptidase/peptidase B YPA_RS15350 IPR023042 Peptidase M17, leucine aminopeptidase YPA_RS15355 IPR007459 DNA polymerase III chi subunit, HolC YPA_RS15360 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPA_RS15360 IPR002300 Aminoacyl-tRNA synthetase, class Ia YPA_RS15360 IPR002303 Valine-tRNA ligase YPA_RS15360 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain YPA_RS15360 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding YPA_RS15360 IPR010978 tRNA-binding arm YPA_RS15360 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding YPA_RS15360 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPA_RS15360 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm YPA_RS15365 IPR000182 GNAT domain YPA_RS15365 IPR016181 Acyl-CoA N-acyltransferase YPA_RS15370 IPR009671 Regulator of ribonuclease activity B domain YPA_RS15370 IPR016716 Regulator of ribonuclease activity B YPA_RS15380 IPR004375 Conserved hypothetical protein CHP00022 YPA_RS15390 IPR000515 MetI-like domain YPA_RS15395 IPR000515 MetI-like domain YPA_RS15395 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YPA_RS15400 IPR003439 ABC transporter-like YPA_RS15400 IPR003593 AAA+ ATPase domain YPA_RS15400 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS15405 IPR003439 ABC transporter-like YPA_RS15405 IPR003593 AAA+ ATPase domain YPA_RS15405 IPR017871 ABC transporter, conserved site YPA_RS15405 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS15410 IPR005144 ATP-cone YPA_RS15410 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic YPA_RS15410 IPR019777 Formate C-acetyltransferase glycine radical, conserved site YPA_RS15415 IPR001989 Radical-activating enzyme, conserved site YPA_RS15415 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic YPA_RS15415 IPR013785 Aldolase-type TIM barrel YPA_RS15420 IPR000524 Transcription regulator HTH, GntR YPA_RS15420 IPR011663 UbiC transcription regulator-associated YPA_RS15420 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS15420 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF YPA_RS15420 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain YPA_RS15425 IPR009609 Phosphonate metabolism PhnG YPA_RS15430 IPR008772 Bacterial phosphonate metabolism, PhnH YPA_RS15435 IPR008773 Phosphonate metabolism protein PhnI YPA_RS15440 IPR010306 Phosphonate metabolism PhnJ YPA_RS15445 IPR003439 ABC transporter-like YPA_RS15445 IPR003593 AAA+ ATPase domain YPA_RS15445 IPR012700 Phosphonate C-P lyase system, PhnK YPA_RS15445 IPR017871 ABC transporter, conserved site YPA_RS15445 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS15450 IPR003439 ABC transporter-like YPA_RS15450 IPR003593 AAA+ ATPase domain YPA_RS15450 IPR012701 Phosphonate C-P lyase system, PhnL YPA_RS15450 IPR017871 ABC transporter, conserved site YPA_RS15450 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS15455 IPR011059 Metal-dependent hydrolase, composite domain YPA_RS15455 IPR012696 Phosphonate metabolism PhnM YPA_RS15455 IPR013108 Amidohydrolase 3 YPA_RS15455 IPR032466 YPA_RS15455 YPA_RS15460 IPR008145 Guanylate kinase/L-type calcium channel beta subunit YPA_RS15460 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN YPA_RS15460 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS15465 IPR001279 Beta-lactamase-like YPA_RS15465 IPR017693 Phosphonate metabolism protein PhnP YPA_RS15470 IPR000534 Semialdehyde dehydrogenase, NAD-binding YPA_RS15470 IPR016040 NAD(P)-binding domain YPA_RS15475 IPR011194 Uncharacterised protein family UPF0306 YPA_RS15475 IPR012349 FMN-binding split barrel YPA_RS15480 IPR008397 Alginate lyase domain YPA_RS15480 IPR008929 Chondroitin AC/alginate lyase YPA_RS15485 IPR003439 ABC transporter-like YPA_RS15485 IPR003593 AAA+ ATPase domain YPA_RS15485 IPR008995 Molybdate/tungstate binding, C-terminal YPA_RS15485 IPR012340 Nucleic acid-binding, OB-fold YPA_RS15485 IPR013611 Transport-associated OB, type 2 YPA_RS15485 IPR017871 ABC transporter, conserved site YPA_RS15485 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS15490 IPR000515 MetI-like domain YPA_RS15495 IPR000515 MetI-like domain YPA_RS15500 IPR006059 Bacterial extracellular solute-binding, family 1 YPA_RS15505 IPR008397 Alginate lyase domain YPA_RS15505 IPR008929 Chondroitin AC/alginate lyase YPA_RS15510 IPR008397 Alginate lyase domain YPA_RS15510 IPR008929 Chondroitin AC/alginate lyase YPA_RS15510 IPR012480 Heparinase II/III-like YPA_RS15515 IPR000305 GIY-YIG nuclease superfamily YPA_RS15515 IPR022992 Uncharacterised protein family UPF0213, GIY-YIG endonuclease YPA_RS15520 IPR000182 GNAT domain YPA_RS15520 IPR016181 Acyl-CoA N-acyltransferase YPA_RS15525 IPR003033 SCP2 sterol-binding domain YPA_RS15525 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT YPA_RS15535 IPR001539 Peptidase U32 YPA_RS15535 IPR022998 Thiamin phosphate synthase superfamily YPA_RS15540 IPR001539 Peptidase U32 YPA_RS15545 IPR003423 Outer membrane efflux protein YPA_RS15545 IPR010131 RND efflux system, outer membrane lipoprotein, NodT YPA_RS15550 IPR001036 Acriflavin resistance protein YPA_RS15550 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 YPA_RS15550 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPA_RS15555 IPR006143 RND efflux pump, membrane fusion protein YPA_RS15555 IPR032317 YPA_RS15555 YPA_RS15560 IPR011251 Luciferase-like domain YPA_RS15560 IPR019949 Luciferase family oxidoreductase, group 1 YPA_RS15565 IPR001387 Cro/C1-type helix-turn-helix domain YPA_RS15565 IPR010982 Lambda repressor-like, DNA-binding domain YPA_RS15570 IPR009241 Addiction module killer protein YPA_RS15580 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site YPA_RS15580 IPR001650 Helicase, C-terminal YPA_RS15580 IPR005580 DbpA, RNA-binding YPA_RS15580 IPR011545 DEAD/DEAH box helicase domain YPA_RS15580 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YPA_RS15580 IPR021046 Cold-shock protein, DEAD box A, C-terminal YPA_RS15580 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS15580 IPR028618 ATP-dependent RNA helicase DeaD YPA_RS15585 IPR011990 Tetratricopeptide-like helical domain YPA_RS15585 IPR013105 Tetratricopeptide TPR2 YPA_RS15585 IPR019734 Tetratricopeptide repeat YPA_RS15585 IPR023605 Lipoprotein NlpI YPA_RS15590 IPR001247 Exoribonuclease, phosphorolytic domain 1 YPA_RS15590 IPR003029 Ribosomal protein S1, RNA-binding domain YPA_RS15590 IPR004087 K Homology domain YPA_RS15590 IPR004088 K Homology domain, type 1 YPA_RS15590 IPR012162 Polyribonucleotide nucleotidyltransferase YPA_RS15590 IPR012340 Nucleic acid-binding, OB-fold YPA_RS15590 IPR015847 Exoribonuclease, phosphorolytic domain 2 YPA_RS15590 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain YPA_RS15590 IPR020568 Ribosomal protein S5 domain 2-type fold YPA_RS15590 IPR022967 RNA-binding domain, S1 YPA_RS15590 IPR027408 PNPase/RNase PH domain YPA_RS15595 IPR001584 Integrase, catalytic core YPA_RS15595 IPR012337 Ribonuclease H-like domain YPA_RS15595 IPR025948 HTH-like domain YPA_RS15600 IPR009057 Homeodomain-like YPA_RS15600 IPR010921 Trp repressor/replication initiator YPA_RS15600 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS15605 IPR003462 Ornithine cyclodeaminase/mu-crystallin YPA_RS15605 IPR016040 NAD(P)-binding domain YPA_RS15605 IPR023401 Ornithine cyclodeaminase, N-terminal YPA_RS15610 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site YPA_RS15610 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPA_RS15620 IPR011042 Six-bladed beta-propeller, TolB-like YPA_RS15620 IPR011659 WD40-like Beta Propeller YPA_RS15625 IPR010780 Protein of unknown function DUF1375 YPA_RS15630 IPR002068 Alpha crystallin/Hsp20 domain YPA_RS15630 IPR008978 HSP20-like chaperone YPA_RS15630 IPR023728 Small heat shock protein IbpA YPA_RS15630 IPR031107 YPA_RS15630 YPA_RS15635 IPR002068 Alpha crystallin/Hsp20 domain YPA_RS15635 IPR008978 HSP20-like chaperone YPA_RS15635 IPR022848 Small heat shock protein IbpB YPA_RS15635 IPR031107 YPA_RS15635 YPA_RS15640 IPR006037 Regulator of K+ conductance, C-terminal YPA_RS15640 IPR006512 YidE/YbjL duplication YPA_RS15640 IPR023018 Transport protein YidE, putative YPA_RS15645 IPR004839 Aminotransferase, class I/classII YPA_RS15645 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPA_RS15645 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPA_RS15645 IPR015424 Pyridoxal phosphate-dependent transferase YPA_RS15655 IPR006047 Glycosyl hydrolase, family 13, catalytic domain YPA_RS15655 IPR013781 Glycoside hydrolase, catalytic domain YPA_RS15655 IPR014635 Alpha-amylase, MalS type YPA_RS15655 IPR015902 Glycoside hydrolase, family 13 YPA_RS15655 IPR017853 Glycoside hydrolase, superfamily YPA_RS15660 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPA_RS15660 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain YPA_RS15660 IPR016040 NAD(P)-binding domain YPA_RS15660 IPR023756 Glyoxylate/hydroxypyruvate reductase B YPA_RS15660 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YPA_RS15660 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YPA_RS15665 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS15670 IPR006664 Outer membrane protein, bacterial YPA_RS15670 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal YPA_RS15675 IPR000182 GNAT domain YPA_RS15675 IPR016181 Acyl-CoA N-acyltransferase YPA_RS15680 IPR004597 DNA-3-methyladenine glycosylase I YPA_RS15680 IPR005019 Methyladenine glycosylase YPA_RS15680 IPR011257 DNA glycosylase YPA_RS15685 IPR002310 Glycine-tRNA ligase, alpha subunit YPA_RS15690 IPR008909 DALR anticodon binding YPA_RS15690 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding YPA_RS15690 IPR015944 Glycine-tRNA ligase, beta subunit YPA_RS15695 IPR021413 Protein of unknown function DUF3053 YPA_RS15700 IPR002178 PTS EIIA type-2 domain YPA_RS15700 IPR003352 Phosphotransferase system, EIIC YPA_RS15700 IPR003501 Phosphotransferase system, EIIB component, type 2/3 YPA_RS15700 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC YPA_RS15700 IPR016152 Phosphotransferase/anion transporter YPA_RS15700 IPR029503 Phosphotransferase system EIIB component, mannitol-specific YPA_RS15705 IPR000669 Mannitol dehydrogenase YPA_RS15705 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YPA_RS15705 IPR013118 Mannitol dehydrogenase, C-terminal YPA_RS15705 IPR013131 Mannitol dehydrogenase, N-terminal YPA_RS15705 IPR013328 Dehydrogenase, multihelical YPA_RS15705 IPR016040 NAD(P)-binding domain YPA_RS15705 IPR023027 Mannitol dehydrogenase, conserved site YPA_RS15705 IPR023028 Mannitol-1-phosphate 5-dehydrogenase YPA_RS15710 IPR007761 Mannitol repressor YPA_RS15715 IPR021230 Protein of unknown function DUF2810 YPA_RS15720 IPR019545 DM13 domain YPA_RS15730 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YPA_RS15730 IPR004090 Chemotaxis methyl-accepting receptor YPA_RS15735 IPR001270 ClpA/B family YPA_RS15735 IPR002611 IstB-like ATP-binding protein YPA_RS15735 IPR003593 AAA+ ATPase domain YPA_RS15735 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS15735 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS15740 IPR001584 Integrase, catalytic core YPA_RS15740 IPR006120 Resolvase, HTH domain YPA_RS15740 IPR009057 Homeodomain-like YPA_RS15740 IPR012337 Ribonuclease H-like domain YPA_RS15750 IPR001189 Manganese/iron superoxide dismutase YPA_RS15750 IPR019831 Manganese/iron superoxide dismutase, N-terminal YPA_RS15750 IPR019832 Manganese/iron superoxide dismutase, C-terminal YPA_RS15750 IPR019833 Manganese/iron superoxide dismutase, binding site YPA_RS15755 IPR003786 Protein FdhD YPA_RS15755 IPR016193 Cytidine deaminase-like YPA_RS15760 IPR006656 Molybdopterin oxidoreductase YPA_RS15760 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain YPA_RS15760 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site YPA_RS15765 IPR006443 Formate dehydrogenase, alpha subunit, anaerobic YPA_RS15765 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site YPA_RS15765 IPR006656 Molybdopterin oxidoreductase YPA_RS15765 IPR006657 Molydopterin dinucleotide-binding domain YPA_RS15765 IPR009010 Aspartate decarboxylase-like domain YPA_RS15770 IPR006470 Formate dehydrogenase, beta subunit YPA_RS15770 IPR014603 Formate dehydrogenase, iron-sulphur subunit YPA_RS15770 IPR015246 Formate dehydrogenase, transmembrane YPA_RS15770 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPA_RS15770 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPA_RS15775 IPR006471 Formate dehydrogenase, gamma subunit YPA_RS15775 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase YPA_RS15775 IPR016174 Di-haem cytochrome, transmembrane YPA_RS15780 IPR006452 Formate dehydrogenase accessory protein YPA_RS15780 IPR024064 FdhE-like YPA_RS15785 IPR004534 L-seryl-tRNA selenium transferase YPA_RS15785 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPA_RS15785 IPR015424 Pyridoxal phosphate-dependent transferase YPA_RS15785 IPR018319 L-seryl-tRNA selenium transferase-like YPA_RS15785 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain YPA_RS15790 IPR000795 Elongation factor, GTP-binding domain YPA_RS15790 IPR004535 Translation elongation factor, selenocysteine-specific YPA_RS15790 IPR009000 Translation protein, beta-barrel domain YPA_RS15790 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal YPA_RS15790 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS15790 IPR015190 Translation elongation factor SelB, winged helix, type 2 YPA_RS15790 IPR015191 Translation elongation factor SelB, winged helix, type 3 YPA_RS15790 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS15790 IPR031157 YPA_RS15790 YPA_RS15795 IPR002513 Tn3 transposase DDE domain YPA_RS15805 IPR025320 Protein of unknown function DUF4225 YPA_RS15820 IPR011701 Major facilitator superfamily YPA_RS15820 IPR020846 Major facilitator superfamily domain YPA_RS15825 IPR001584 Integrase, catalytic core YPA_RS15825 IPR012337 Ribonuclease H-like domain YPA_RS15825 IPR025948 HTH-like domain YPA_RS15830 IPR009057 Homeodomain-like YPA_RS15830 IPR010921 Trp repressor/replication initiator YPA_RS15830 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS15835 IPR022553 Protein of unknown function DUF2645 YPA_RS15845 IPR008523 Lactobacillus phage LBR48, DUF805 YPA_RS15865 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal YPA_RS15865 IPR025713 Motility protein B, N-terminal domain YPA_RS15870 IPR000540 Flagellar motor protein MotA, conserved site YPA_RS15870 IPR002898 MotA/TolQ/ExbB proton channel YPA_RS15870 IPR022522 Flagellar motor stator, MotA YPA_RS15875 IPR000943 RNA polymerase sigma-70 YPA_RS15875 IPR007624 RNA polymerase sigma-70 region 3 YPA_RS15875 IPR007627 RNA polymerase sigma-70 region 2 YPA_RS15875 IPR007630 RNA polymerase sigma-70 region 4 YPA_RS15875 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS15875 IPR012845 RNA polymerase sigma factor, FliA/WhiG YPA_RS15875 IPR013324 RNA polymerase sigma factor, region 3/4 YPA_RS15875 IPR013325 RNA polymerase sigma factor, region 2 YPA_RS15875 IPR014284 RNA polymerase sigma-70 like domain YPA_RS15880 IPR005503 Flagellar basal body-associated protein FliL YPA_RS15885 IPR011004 Trimeric LpxA-like YPA_RS15885 IPR018357 Hexapeptide transferase, conserved site YPA_RS15885 IPR021136 Flagellar hook-length control protein-like, C-terminal YPA_RS15895 IPR003713 Flagellar protein FliS YPA_RS15900 IPR003481 Flagellar hook-associated protein 2, N-terminal YPA_RS15900 IPR010809 Flagellar hook-associated 2, C-terminal YPA_RS15900 IPR010810 Flagellin hook, IN motif YPA_RS15905 IPR001029 Flagellin, D0/D1 domain YPA_RS15905 IPR001492 Flagellin YPA_RS15910 IPR001029 Flagellin, D0/D1 domain YPA_RS15910 IPR001492 Flagellin YPA_RS15915 IPR001029 Flagellin, D0/D1 domain YPA_RS15915 IPR001492 Flagellin YPA_RS15920 IPR001867 Signal transduction response regulator, C-terminal YPA_RS15920 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS15920 IPR016032 Signal transduction response regulator, C-terminal effector YPA_RS15935 IPR001029 Flagellin, D0/D1 domain YPA_RS15935 IPR013384 Flagellar hook-associated protein 3 YPA_RS15940 IPR001444 Flagellar basal body rod protein, N-terminal YPA_RS15940 IPR002371 Flagellar hook-associated protein, FlgK YPA_RS15940 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPA_RS15945 IPR019301 Flagellar protein FlgJ, N-terminal YPA_RS15950 IPR001782 Flagellar P-ring protein YPA_RS15955 IPR000527 Flagellar L-ring protein YPA_RS15960 IPR001444 Flagellar basal body rod protein, N-terminal YPA_RS15960 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPA_RS15960 IPR012834 Flagellar basal-body rod FlgG YPA_RS15960 IPR019776 Flagellar basal body rod protein, conserved site YPA_RS15960 IPR020013 Fagellar hook-basal body protein, FlgE/F/G YPA_RS15965 IPR001444 Flagellar basal body rod protein, N-terminal YPA_RS15965 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPA_RS15965 IPR012836 Flagellar basal-body rod FlgF YPA_RS15965 IPR020013 Fagellar hook-basal body protein, FlgE/F/G YPA_RS15970 IPR001444 Flagellar basal body rod protein, N-terminal YPA_RS15970 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPA_RS15970 IPR011491 Flagellar basal body FlaE YPA_RS15970 IPR019776 Flagellar basal body rod protein, conserved site YPA_RS15970 IPR020013 Fagellar hook-basal body protein, FlgE/F/G YPA_RS15975 IPR005648 Flagellar hook capping protein YPA_RS15975 IPR025963 FlgD Tudor-like domain YPA_RS15975 IPR025965 FlgD Ig-like domain YPA_RS15980 IPR001444 Flagellar basal body rod protein, N-terminal YPA_RS15980 IPR006299 Flagellar basal-body rod protein FlgC YPA_RS15980 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPA_RS15980 IPR019776 Flagellar basal body rod protein, conserved site YPA_RS15985 IPR001444 Flagellar basal body rod protein, N-terminal YPA_RS15985 IPR006300 Flagellar basal-body rod protein FlgB YPA_RS15985 IPR019776 Flagellar basal body rod protein, conserved site YPA_RS15990 IPR013974 SAF domain YPA_RS15990 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal YPA_RS15995 IPR007412 Anti-sigma-28 factor, FlgM YPA_RS15995 IPR031316 YPA_RS15995 YPA_RS16000 IPR007809 FlgN-like domain YPA_RS16005 IPR012823 Flagellar export FliJ YPA_RS16010 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain YPA_RS16010 IPR003593 AAA+ ATPase domain YPA_RS16010 IPR005714 ATPase, type III secretion system, FliI/YscN YPA_RS16010 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site YPA_RS16010 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS16010 IPR032463 YPA_RS16010 YPA_RS16015 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE YPA_RS16015 IPR019191 Essential protein Yae1, N-terminal YPA_RS16020 IPR000090 Flagellar motor switch protein FliG YPA_RS16020 IPR011002 Flagellar motor switch protein FliG, alpha-helical YPA_RS16020 IPR023087 YPA_RS16020 YPA_RS16020 IPR032779 YPA_RS16020 YPA_RS16025 IPR001584 Integrase, catalytic core YPA_RS16025 IPR006120 Resolvase, HTH domain YPA_RS16025 IPR009057 Homeodomain-like YPA_RS16025 IPR012337 Ribonuclease H-like domain YPA_RS16030 IPR001270 ClpA/B family YPA_RS16030 IPR002611 IstB-like ATP-binding protein YPA_RS16030 IPR003593 AAA+ ATPase domain YPA_RS16030 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS16030 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS16035 IPR000090 Flagellar motor switch protein FliG YPA_RS16035 IPR011002 Flagellar motor switch protein FliG, alpha-helical YPA_RS16035 IPR028263 Flagellar motor switch protein FliG, N-terminal domain YPA_RS16040 IPR000067 Flagellar M-ring protein FliF YPA_RS16040 IPR006182 Secretory protein YscJ/FliF YPA_RS16040 IPR013556 Flagellar M-ring C-terminal YPA_RS16045 IPR001624 Flagellar hook-basal body complex protein FliE YPA_RS16050 IPR002078 RNA polymerase sigma factor 54 interaction domain YPA_RS16050 IPR002197 DNA binding HTH domain, Fis-type YPA_RS16050 IPR003593 AAA+ ATPase domain YPA_RS16050 IPR009057 Homeodomain-like YPA_RS16050 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YPA_RS16050 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPA_RS16050 IPR025944 Sigma-54 interaction domain, conserved site YPA_RS16050 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS16050 IPR029995 YPA_RS16050 YPA_RS16060 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb YPA_RS16060 IPR001543 Surface presentation of antigen (SpoA) YPA_RS16060 IPR012826 Flagellar motor switch FliN YPA_RS16065 IPR005837 Flagellar transport protein FliP YPA_RS16065 IPR005838 Type III secretion system inner membrane P protein YPA_RS16070 IPR002191 Bacterial export protein family 3 YPA_RS16070 IPR006305 Flagellar biosynthesis protein FliQ YPA_RS16075 IPR002010 Type III secretion system inner membrane R protein YPA_RS16080 IPR006135 Type III secretion system substrate exporter YPA_RS16080 IPR006136 Type III exporter system, flagellar biosynthetic protein FlhB YPA_RS16080 IPR029025 Type III secretion system substrate exporter, C-terminal YPA_RS16085 IPR001712 Type III secretion system FHIPEP YPA_RS16085 IPR025505 FHIPEP conserved site YPA_RS16090 IPR021326 Protein of unknown function DUF2931 YPA_RS16100 IPR002491 ABC transporter periplasmic binding domain YPA_RS16105 IPR000259 Fimbrial-type adhesion domain YPA_RS16105 IPR008966 Adhesion domain YPA_RS16110 IPR001829 Pili assembly chaperone, bacterial YPA_RS16110 IPR008962 PapD-like YPA_RS16110 IPR016147 PapD, N-terminal, bacterial YPA_RS16110 IPR016148 Pili assembly chaperone, C-terminal domain YPA_RS16110 IPR018046 Pili assembly chaperone, conserved site YPA_RS16115 IPR000015 Outer membrane usher protein YPA_RS16115 IPR025885 PapC, N-terminal domain YPA_RS16115 IPR025949 PapC-like, C-terminal domain YPA_RS16120 IPR002686 Transposase IS200-like YPA_RS16125 IPR000045 Prepilin type IV endopeptidase, peptidase domain YPA_RS16135 IPR032789 YPA_RS16135 YPA_RS16140 IPR004846 Type II/III secretion system YPA_RS16150 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS16155 IPR001482 Type II secretion system protein E YPA_RS16155 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS16160 IPR018076 Type II secretion system F domain YPA_RS16165 IPR018076 Type II secretion system F domain YPA_RS16170 IPR011990 Tetratricopeptide-like helical domain YPA_RS16175 IPR012495 TadE-like YPA_RS16180 IPR031582 YPA_RS16180 YPA_RS16185 IPR002035 von Willebrand factor, type A YPA_RS16190 IPR003400 Biopolymer transport protein ExbD/TolR YPA_RS16190 IPR014170 TonB system transport protein ExbD type-1 YPA_RS16195 IPR002898 MotA/TolQ/ExbB proton channel YPA_RS16195 IPR014164 TonB-system energizer ExbB type-1 YPA_RS16200 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme YPA_RS16200 IPR006233 Cystathionine beta-lyase, bacterial YPA_RS16200 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPA_RS16200 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPA_RS16200 IPR015424 Pyridoxal phosphate-dependent transferase YPA_RS16210 IPR009057 Homeodomain-like YPA_RS16210 IPR009594 Transcription regulator HTH, AraC, N-terminal YPA_RS16210 IPR018060 DNA binding HTH domain, AraC-type YPA_RS16215 IPR001670 Alcohol dehydrogenase, iron-type YPA_RS16215 IPR018211 Alcohol dehydrogenase, iron-type, conserved site YPA_RS16225 IPR001395 Aldo/keto reductase YPA_RS16225 IPR018170 Aldo/keto reductase, conserved site YPA_RS16225 IPR020471 Aldo/keto reductase subgroup YPA_RS16225 IPR023210 NADP-dependent oxidoreductase domain YPA_RS16235 IPR008972 Cupredoxin YPA_RS16235 IPR011706 Multicopper oxidase, type 2 YPA_RS16235 IPR011707 Multicopper oxidase, type 3 YPA_RS16235 IPR026589 Cell division protein FtsP YPA_RS16240 IPR002123 Phospholipid/glycerol acyltransferase YPA_RS16240 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase YPA_RS16245 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal YPA_RS16245 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative YPA_RS16245 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel YPA_RS16245 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta YPA_RS16245 IPR013760 DNA topoisomerase, type IIA-like domain YPA_RS16245 IPR024946 Arginine repressor C-terminal-like domain YPA_RS16255 IPR003680 Flavodoxin-like fold YPA_RS16255 IPR029039 Flavoprotein-like YPA_RS16260 IPR000847 Transcription regulator HTH, LysR YPA_RS16260 IPR005119 LysR, substrate-binding YPA_RS16260 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS16265 IPR001241 DNA topoisomerase, type IIA YPA_RS16265 IPR002288 DNA gyrase B subunit, C-terminal YPA_RS16265 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPA_RS16265 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative YPA_RS16265 IPR006171 Toprim domain YPA_RS16265 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 YPA_RS16265 IPR013759 DNA topoisomerase, type IIA, central domain YPA_RS16265 IPR013760 DNA topoisomerase, type IIA-like domain YPA_RS16265 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPA_RS16265 IPR018522 DNA topoisomerase, type IIA, conserved site YPA_RS16265 IPR020568 Ribosomal protein S5 domain 2-type fold YPA_RS16270 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA YPA_RS16270 IPR029058 Alpha/Beta hydrolase fold YPA_RS16280 IPR009659 Protein of unknown function DUF1249 YPA_RS16285 IPR000086 NUDIX hydrolase domain YPA_RS16285 IPR004385 Nucleoside diphosphate pyrophosphatase YPA_RS16285 IPR015797 NUDIX hydrolase domain-like YPA_RS16285 IPR020084 NUDIX hydrolase, conserved site YPA_RS16290 IPR003423 Outer membrane efflux protein YPA_RS16290 IPR010130 Type I secretion outer membrane protein, TolC YPA_RS16300 IPR009576 Biofilm formation YgiB YPA_RS16305 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain YPA_RS16305 IPR016185 Pre-ATP-grasp domain YPA_RS16310 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B YPA_RS16310 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type YPA_RS16315 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB YPA_RS16315 IPR017945 DHBP synthase RibB-like alpha/beta domain YPA_RS16325 IPR007475 Membrane fusogenic activity YPA_RS16330 IPR002293 Amino acid/polyamine transporter I YPA_RS16335 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YPA_RS16335 IPR004821 Cytidyltransferase-like domain YPA_RS16335 IPR011611 Carbohydrate kinase PfkB YPA_RS16335 IPR011913 RfaE bifunctional protein, domain I YPA_RS16335 IPR011914 RfaE bifunctional protein, domain II YPA_RS16335 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPA_RS16335 IPR023030 Bifunctional protein HldE YPA_RS16335 IPR029056 Ribokinase-like YPA_RS16340 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain YPA_RS16340 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase YPA_RS16340 IPR023057 Glutamate-ammonia-ligase adenylyltransferase YPA_RS16345 IPR023577 CYTH-like domain YPA_RS16345 IPR033469 YPA_RS16345 YPA_RS16350 IPR003646 SH3-like domain, bacterial-type YPA_RS16350 IPR016476 SH3 domain protein YPA_RS16355 IPR002646 Poly A polymerase, head domain YPA_RS16355 IPR003607 HD/PDEase domain YPA_RS16355 IPR006674 HD domain YPA_RS16355 IPR012006 tRNA nucleotidyltransferase, proteobacteria YPA_RS16355 IPR032828 YPA_RS16355 YPA_RS16360 IPR003824 Undecaprenyl-diphosphatase UppP YPA_RS16365 IPR006156 Dihydroneopterin aldolase YPA_RS16365 IPR006157 Dihydroneopterin aldolase/epimerase domain YPA_RS16370 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY YPA_RS16375 IPR000905 Gcp-like domain YPA_RS16375 IPR017860 Peptidase M22, conserved site YPA_RS16375 IPR017861 Kae1/YgjD family YPA_RS16375 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD YPA_RS16380 IPR001911 Ribosomal protein S21 YPA_RS16380 IPR018278 Ribosomal protein S21, conserved site YPA_RS16385 IPR002694 Zinc finger, CHC2-type YPA_RS16385 IPR006171 Toprim domain YPA_RS16385 IPR006295 DNA primase, DnaG YPA_RS16385 IPR013173 DNA primase DnaG, DnaB-binding domain YPA_RS16385 IPR013264 DNA primase, catalytic core, N-terminal YPA_RS16385 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal YPA_RS16385 IPR019475 DNA primase, DnaB-helicase binding domain YPA_RS16385 IPR030846 YPA_RS16385 YPA_RS16390 IPR000943 RNA polymerase sigma-70 YPA_RS16390 IPR007127 RNA polymerase sigma factor 70, region 1.1 YPA_RS16390 IPR007624 RNA polymerase sigma-70 region 3 YPA_RS16390 IPR007627 RNA polymerase sigma-70 region 2 YPA_RS16390 IPR007630 RNA polymerase sigma-70 region 4 YPA_RS16390 IPR007631 RNA polymerase sigma factor 70, non-essential domain YPA_RS16390 IPR009042 RNA polymerase sigma-70 region 1.2 YPA_RS16390 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS16390 IPR012760 RNA polymerase sigma factor RpoD, C-terminal YPA_RS16390 IPR013324 RNA polymerase sigma factor, region 3/4 YPA_RS16390 IPR013325 RNA polymerase sigma factor, region 2 YPA_RS16390 IPR014284 RNA polymerase sigma-70 like domain YPA_RS16390 IPR028630 RNA polymerase sigma factor RpoD YPA_RS16405 IPR005335 Terminase small subunit YPA_RS16415 IPR018958 SMI1/KNR4 like domain YPA_RS16420 IPR016583 Uncharacterised conserved protein UCP011452, HNH endonuclease domain-type YPA_RS16430 IPR001270 ClpA/B family YPA_RS16430 IPR002611 IstB-like ATP-binding protein YPA_RS16430 IPR003593 AAA+ ATPase domain YPA_RS16430 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS16430 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS16435 IPR001584 Integrase, catalytic core YPA_RS16435 IPR006120 Resolvase, HTH domain YPA_RS16435 IPR009057 Homeodomain-like YPA_RS16435 IPR012337 Ribonuclease H-like domain YPA_RS16450 IPR003812 Fido domain YPA_RS16455 IPR003812 Fido domain YPA_RS16460 IPR000847 Transcription regulator HTH, LysR YPA_RS16460 IPR005119 LysR, substrate-binding YPA_RS16460 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS16465 IPR012336 Thioredoxin-like fold YPA_RS16465 IPR023169 UPF0413, central domain YPA_RS16470 IPR011008 Dimeric alpha-beta barrel YPA_RS16470 IPR014910 Mono-oxygenase, YdhR YPA_RS16475 IPR006175 YjgF/Yer057p/UK114 family YPA_RS16475 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like YPA_RS16480 IPR006056 Enamine/imine deaminase YjgF-like YPA_RS16480 IPR006175 YjgF/Yer057p/UK114 family YPA_RS16480 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like YPA_RS16480 IPR019897 YjgF-like protein, conserved site YPA_RS16485 IPR013559 YheO-like YPA_RS16490 IPR019587 Polyketide cyclase/dehydrase YPA_RS16490 IPR023393 START-like domain YPA_RS16495 IPR018461 Na+/H+ antiporter, NhaC-like YPA_RS16500 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site YPA_RS16500 IPR004839 Aminotransferase, class I/classII YPA_RS16500 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPA_RS16500 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPA_RS16500 IPR015424 Pyridoxal phosphate-dependent transferase YPA_RS16515 IPR031381 YPA_RS16515 YPA_RS16520 IPR030196 YPA_RS16520 YPA_RS16525 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein YPA_RS16530 IPR003423 Outer membrane efflux protein YPA_RS16530 IPR028351 Cyclolysin transport protein CyaE YPA_RS16535 IPR001764 Glycoside hydrolase, family 3, N-terminal YPA_RS16535 IPR002772 Glycoside hydrolase family 3 C-terminal domain YPA_RS16535 IPR017853 Glycoside hydrolase, superfamily YPA_RS16535 IPR026891 Fibronectin type III-like domain YPA_RS16535 IPR026892 Glycoside hydrolase family 3 YPA_RS16545 IPR000515 MetI-like domain YPA_RS16550 IPR000515 MetI-like domain YPA_RS16555 IPR006059 Bacterial extracellular solute-binding, family 1 YPA_RS16560 IPR000843 Transcription regulator HTH, LacI YPA_RS16560 IPR010982 Lambda repressor-like, DNA-binding domain YPA_RS16560 IPR028082 Periplasmic binding protein-like I YPA_RS16565 IPR008928 Six-hairpin glycosidase-like YPA_RS16570 IPR003439 ABC transporter-like YPA_RS16570 IPR003593 AAA+ ATPase domain YPA_RS16570 IPR008995 Molybdate/tungstate binding, C-terminal YPA_RS16570 IPR012340 Nucleic acid-binding, OB-fold YPA_RS16570 IPR013611 Transport-associated OB, type 2 YPA_RS16570 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS16575 IPR019282 Domain of unknown function DUF2329 YPA_RS16580 IPR025737 MetA-pathway of phenol degradation, putative YPA_RS16585 IPR005546 Autotransporter beta-domain YPA_RS16600 IPR028952 Immunity protein 38 YPA_RS16610 IPR025157 Haemagluttinin repeat YPA_RS16620 IPR006914 VENN motif-containing domain YPA_RS16620 IPR008638 Filamentous haemagglutinin, N-terminal YPA_RS16620 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPA_RS16620 IPR011050 Pectin lyase fold/virulence factor YPA_RS16620 IPR012334 Pectin lyase fold YPA_RS16620 IPR024973 ESPR domain YPA_RS16620 IPR025157 Haemagluttinin repeat YPA_RS16625 IPR005565 Haemolysin activator HlyB YPA_RS16625 IPR013686 Polypeptide-transport-associated, ShlB-type YPA_RS16625 IPR027282 Two partner secretion pathway transporter YPA_RS16630 IPR002035 von Willebrand factor, type A YPA_RS16630 IPR011392 Tellurite resistance, TerY YPA_RS16635 IPR003325 TerD domain YPA_RS16640 IPR002035 von Willebrand factor, type A YPA_RS16640 IPR011392 Tellurite resistance, TerY YPA_RS16645 IPR002035 von Willebrand factor, type A YPA_RS16645 IPR028274 TerY-C metal binding domain YPA_RS16650 IPR001932 Protein phosphatase 2C (PP2C)-like domain YPA_RS16655 IPR000719 Protein kinase domain YPA_RS16655 IPR008266 Tyrosine-protein kinase, active site YPA_RS16655 IPR011009 Protein kinase-like domain YPA_RS16665 IPR005325 Protein of unknown function DUF308, membrane YPA_RS16670 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal YPA_RS16670 IPR013785 Aldolase-type TIM barrel YPA_RS16670 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPA_RS16675 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPA_RS16675 IPR007848 Methyltransferase small domain YPA_RS16675 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD YPA_RS16675 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPA_RS16680 IPR004899 Pertactin, central region YPA_RS16680 IPR005546 Autotransporter beta-domain YPA_RS16680 IPR006315 Outer membrane autotransporter barrel YPA_RS16680 IPR011050 Pectin lyase fold/virulence factor YPA_RS16680 IPR012332 P22 tailspike C-terminal domain-like YPA_RS16685 IPR002725 Protein of unknown function DUF45 YPA_RS16690 IPR000683 Oxidoreductase, N-terminal YPA_RS16690 IPR016040 NAD(P)-binding domain YPA_RS16695 IPR001991 Sodium:dicarboxylate symporter YPA_RS16695 IPR023025 Serine/threonine transporter SstT YPA_RS16700 IPR002686 Transposase IS200-like YPA_RS16705 IPR019629 Uncharacterised protein family HI1736/YgjV YPA_RS16705 IPR026267 Inner membrane protein YgjV YPA_RS16710 IPR007392 D-galactarate dehydratase/Altronate hydrolase, C-terminal YPA_RS16710 IPR013974 SAF domain YPA_RS16720 IPR003766 Uronate isomerase YPA_RS16720 IPR023177 Uronate isomerase, domain 2 YPA_RS16720 IPR032466 YPA_RS16720 YPA_RS16730 IPR000849 Sugar phosphate transporter YPA_RS16730 IPR011701 Major facilitator superfamily YPA_RS16730 IPR020846 Major facilitator superfamily domain YPA_RS16735 IPR000524 Transcription regulator HTH, GntR YPA_RS16735 IPR008920 Transcription regulator FadR/GntR, C-terminal YPA_RS16735 IPR011711 GntR, C-terminal YPA_RS16735 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS16745 IPR032816 YPA_RS16745 YPA_RS16745 IPR032818 YPA_RS16745 YPA_RS16750 IPR026574 Modulator protein MzrA YPA_RS16750 IPR027398 SecD export protein N-terminal TM domain YPA_RS16755 IPR009468 Protein of unknown function DUF1090 YPA_RS16765 IPR010279 Protein of unknown function DUF883, ElaB YPA_RS16770 IPR009937 Protein of unknown function DUF1469 YPA_RS16775 IPR025612 YqjK-like protein YPA_RS16780 IPR032808 YPA_RS16780 YPA_RS16790 IPR001584 Integrase, catalytic core YPA_RS16790 IPR006120 Resolvase, HTH domain YPA_RS16790 IPR009057 Homeodomain-like YPA_RS16790 IPR012337 Ribonuclease H-like domain YPA_RS16795 IPR001270 ClpA/B family YPA_RS16795 IPR002611 IstB-like ATP-binding protein YPA_RS16795 IPR003593 AAA+ ATPase domain YPA_RS16795 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS16795 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS16800 IPR001451 Bacterial transferase hexapeptide repeat YPA_RS16800 IPR011004 Trimeric LpxA-like YPA_RS16805 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase YPA_RS16805 IPR011342 Shikimate dehydrogenase YPA_RS16805 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal YPA_RS16805 IPR016040 NAD(P)-binding domain YPA_RS16805 IPR022893 Shikimate, quinate/shikimate dehydrogenase YPA_RS16810 IPR006070 YrdC-like domain YPA_RS16810 IPR017945 DHBP synthase RibB-like alpha/beta domain YPA_RS16810 IPR023535 Threonylcarbamoyl-AMP synthase YPA_RS16815 IPR000380 DNA topoisomerase, type IA YPA_RS16815 IPR013498 DNA topoisomerase, type IA, zn finger YPA_RS16820 IPR007456 Protein of unknown function DUF494 YPA_RS16825 IPR003488 DNA recombination-mediator protein A YPA_RS16830 IPR000181 Formylmethionine deformylase YPA_RS16830 IPR023635 Peptide deformylase YPA_RS16835 IPR001555 Phosphoribosylglycinamide formyltransferase, active site YPA_RS16835 IPR002376 Formyl transferase, N-terminal YPA_RS16835 IPR005793 Formyl transferase, C-terminal YPA_RS16835 IPR005794 Methionyl-tRNA formyltransferase YPA_RS16835 IPR011034 Formyl transferase, C-terminal-like YPA_RS16840 IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p YPA_RS16840 IPR004573 rRNA small subunit methyltransferase B YPA_RS16840 IPR006027 NusB/RsmB/TIM44 YPA_RS16840 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site YPA_RS16840 IPR023267 RNA (C5-cytosine) methyltransferase YPA_RS16840 IPR023541 rRNA small subunit methyltransferase B, enterobacteriaceae YPA_RS16840 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPA_RS16845 IPR003148 Regulator of K+ conductance, N-terminal YPA_RS16845 IPR006036 Potassium uptake protein TrkA YPA_RS16845 IPR006037 Regulator of K+ conductance, C-terminal YPA_RS16845 IPR016040 NAD(P)-binding domain YPA_RS16850 IPR001185 Large-conductance mechanosensitive channel YPA_RS16850 IPR019823 Large-conductance mechanosensitive channel, conserved site YPA_RS16855 IPR005589 Protein of unknown function DUF331 YPA_RS16860 IPR000551 MerR-type HTH domain YPA_RS16860 IPR009061 DNA binding domain, putative YPA_RS16860 IPR011788 Zn(II)-responsive transcriptional regulator YPA_RS16865 IPR000456 Ribosomal protein L17 YPA_RS16870 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain YPA_RS16870 IPR011260 RNA polymerase, alpha subunit, C-terminal YPA_RS16870 IPR011262 DNA-directed RNA polymerase, insert domain YPA_RS16870 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type YPA_RS16870 IPR011773 DNA-directed RNA polymerase, alpha subunit YPA_RS16875 IPR001912 Ribosomal protein S4/S9, N-terminal YPA_RS16875 IPR002942 RNA-binding S4 domain YPA_RS16875 IPR005709 Ribosomal protein S4, bacterial-type YPA_RS16875 IPR018079 Ribosomal protein S4, conserved site YPA_RS16875 IPR022801 Ribosomal protein S4/S9 YPA_RS16880 IPR001971 Ribosomal protein S11 YPA_RS16880 IPR018102 Ribosomal S11, conserved site YPA_RS16880 IPR019981 Ribosomal protein S11, bacterial-type YPA_RS16885 IPR001892 Ribosomal protein S13 YPA_RS16885 IPR010979 Ribosomal protein S13-like, H2TH YPA_RS16885 IPR018269 Ribosomal protein S13, conserved site YPA_RS16885 IPR019980 Ribosomal protein S13, bacterial-type YPA_RS16885 IPR027437 30s ribosomal protein S13, C-terminal YPA_RS16890 IPR000473 Ribosomal protein L36 YPA_RS16895 IPR002208 SecY/SEC61-alpha family YPA_RS16895 IPR023201 SecY subunit domain YPA_RS16895 IPR026593 Protein translocase subunit SecY YPA_RS16895 IPR030659 YPA_RS16895 YPA_RS16900 IPR001196 Ribosomal protein L15, conserved site YPA_RS16900 IPR005749 Ribosomal protein L15, bacterial-type YPA_RS16900 IPR021131 Ribosomal protein L18e/L15P YPA_RS16900 IPR030878 YPA_RS16900 YPA_RS16905 IPR005996 Ribosomal protein L30, bacterial-type YPA_RS16905 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain YPA_RS16905 IPR018038 Ribosomal protein L30, conserved site YPA_RS16910 IPR000851 Ribosomal protein S5 YPA_RS16910 IPR005324 Ribosomal protein S5, C-terminal YPA_RS16910 IPR005712 Ribosomal protein S5, bacterial-type YPA_RS16910 IPR013810 Ribosomal protein S5, N-terminal YPA_RS16910 IPR014720 Double-stranded RNA-binding domain YPA_RS16910 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPA_RS16910 IPR018192 Ribosomal protein S5, N-terminal, conserved site YPA_RS16910 IPR020568 Ribosomal protein S5 domain 2-type fold YPA_RS16915 IPR004389 Ribosomal protein L18, bacterial-type YPA_RS16915 IPR005484 Ribosomal protein L18/L5 YPA_RS16920 IPR000702 Ribosomal protein L6 YPA_RS16920 IPR002358 Ribosomal protein L6, conserved site YPA_RS16920 IPR019906 Ribosomal protein L6, bacterial-type YPA_RS16920 IPR020040 Ribosomal protein L6, alpha-beta domain YPA_RS16925 IPR000630 Ribosomal protein S8 YPA_RS16930 IPR001209 Ribosomal protein S14 YPA_RS16930 IPR018271 Ribosomal protein S14, conserved site YPA_RS16930 IPR023036 Ribosomal protein S14, bacterial/plastid YPA_RS16935 IPR002132 Ribosomal protein L5 YPA_RS16935 IPR020930 Ribosomal protein L5, bacterial-type YPA_RS16935 IPR022803 Ribosomal protein L5 domain YPA_RS16935 IPR031309 YPA_RS16935 YPA_RS16935 IPR031310 YPA_RS16935 YPA_RS16940 IPR003256 Ribosomal protein L24 YPA_RS16940 IPR005824 KOW YPA_RS16940 IPR005825 Ribosomal protein L24/L26, conserved site YPA_RS16940 IPR008991 Translation protein SH3-like domain YPA_RS16940 IPR014722 Ribosomal protein L2 domain 2 YPA_RS16945 IPR000218 Ribosomal protein L14b/L23e YPA_RS16945 IPR005745 Ribosomal protein L14, bacterial-type YPA_RS16945 IPR019972 Ribosomal protein L14 conserved site YPA_RS16950 IPR000266 Ribosomal protein S17 YPA_RS16950 IPR012340 Nucleic acid-binding, OB-fold YPA_RS16950 IPR019979 Ribosomal protein S17, conserved site YPA_RS16950 IPR019984 Ribosomal protein S17, bacterial-type YPA_RS16955 IPR001854 Ribosomal protein L29 YPA_RS16955 IPR018254 Ribosomal protein L29, conserved site YPA_RS16960 IPR000114 Ribosomal protein L16 YPA_RS16960 IPR016180 Ribosomal protein L10e/L16 YPA_RS16960 IPR020798 Ribosomal protein L16, conserved site YPA_RS16965 IPR001351 Ribosomal protein S3, C-terminal YPA_RS16965 IPR004044 K Homology domain, type 2 YPA_RS16965 IPR004087 K Homology domain YPA_RS16965 IPR005704 Ribosomal protein S3, bacterial YPA_RS16965 IPR009019 K homology domain, prokaryotic type YPA_RS16965 IPR015946 K homology domain-like, alpha/beta YPA_RS16965 IPR018280 Ribosomal protein S3, conserved site YPA_RS16970 IPR001063 Ribosomal protein L22/L17 YPA_RS16970 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type YPA_RS16970 IPR018260 Ribosomal protein L22/L17, conserved site YPA_RS16975 IPR002222 Ribosomal protein S19/S15 YPA_RS16975 IPR005732 Ribosomal protein S19, bacterial-type YPA_RS16975 IPR020934 Ribosomal protein S19 conserved site YPA_RS16975 IPR023575 Ribosomal protein S19, superfamily YPA_RS16980 IPR002171 Ribosomal protein L2 YPA_RS16980 IPR005880 Ribosomal protein L2, bacterial/organellar-type YPA_RS16980 IPR008991 Translation protein SH3-like domain YPA_RS16980 IPR012340 Nucleic acid-binding, OB-fold YPA_RS16980 IPR014722 Ribosomal protein L2 domain 2 YPA_RS16980 IPR014726 Ribosomal protein L2, domain 3 YPA_RS16980 IPR022666 Ribosomal Proteins L2, RNA binding domain YPA_RS16980 IPR022669 Ribosomal protein L2, C-terminal YPA_RS16980 IPR022671 Ribosomal protein L2, conserved site YPA_RS16985 IPR001014 Ribosomal protein L23/L25, conserved site YPA_RS16985 IPR012677 Nucleotide-binding, alpha-beta plait YPA_RS16985 IPR012678 Ribosomal protein L23/L15e core domain YPA_RS16985 IPR013025 Ribosomal protein L25/L23 YPA_RS16990 IPR002136 Ribosomal protein L4/L1e YPA_RS16990 IPR013005 Ribosomal protein L4/L1e, bacterial-type YPA_RS16990 IPR023574 Ribosomal protein L4 domain YPA_RS16995 IPR000597 Ribosomal protein L3 YPA_RS16995 IPR009000 Translation protein, beta-barrel domain YPA_RS16995 IPR019926 Ribosomal protein L3, conserved site YPA_RS16995 IPR019927 Ribosomal protein L3, bacterial/organelle-type YPA_RS17000 IPR001848 Ribosomal protein S10 YPA_RS17000 IPR018268 Ribosomal protein S10, conserved site YPA_RS17000 IPR027486 Ribosomal protein S10 domain YPA_RS17005 IPR002024 Bacterioferritin YPA_RS17005 IPR008331 Ferritin/DPS protein domain YPA_RS17005 IPR009078 Ferritin-like superfamily YPA_RS17005 IPR012347 Ferritin-related YPA_RS17010 IPR007419 BFD-like [2Fe-2S]-binding domain YPA_RS17015 IPR001584 Integrase, catalytic core YPA_RS17015 IPR006120 Resolvase, HTH domain YPA_RS17015 IPR009057 Homeodomain-like YPA_RS17015 IPR012337 Ribonuclease H-like domain YPA_RS17020 IPR001270 ClpA/B family YPA_RS17020 IPR002611 IstB-like ATP-binding protein YPA_RS17020 IPR003593 AAA+ ATPase domain YPA_RS17020 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS17020 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS17025 IPR002686 Transposase IS200-like YPA_RS17030 IPR000795 Elongation factor, GTP-binding domain YPA_RS17030 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal YPA_RS17030 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 YPA_RS17030 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle YPA_RS17030 IPR005225 Small GTP-binding protein domain YPA_RS17030 IPR009000 Translation protein, beta-barrel domain YPA_RS17030 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal YPA_RS17030 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS17030 IPR031157 YPA_RS17030 YPA_RS17035 IPR000640 Translation elongation factor EFG, V domain YPA_RS17035 IPR000795 Elongation factor, GTP-binding domain YPA_RS17035 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 YPA_RS17035 IPR004540 Translation elongation factor EFG/EF2 YPA_RS17035 IPR005225 Small GTP-binding protein domain YPA_RS17035 IPR005517 Translation elongation factor EFG/EF2, domain IV YPA_RS17035 IPR009000 Translation protein, beta-barrel domain YPA_RS17035 IPR009022 Elongation factor G, III-V domain YPA_RS17035 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPA_RS17035 IPR020568 Ribosomal protein S5 domain 2-type fold YPA_RS17035 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS17035 IPR031157 YPA_RS17035 YPA_RS17040 IPR000235 Ribosomal protein S5/S7 YPA_RS17040 IPR005717 Ribosomal protein S7, bacterial/organellar-type YPA_RS17040 IPR020606 Ribosomal protein S7, conserved site YPA_RS17040 IPR023798 Ribosomal protein S7 domain YPA_RS17045 IPR005679 Ribosomal protein S12, bacteria YPA_RS17045 IPR006032 Ribosomal protein S12/S23 YPA_RS17045 IPR012340 Nucleic acid-binding, OB-fold YPA_RS17050 IPR007215 Sulphur relay, TusB/DsrH YPA_RS17050 IPR023526 Sulphur relay, TusB YPA_RS17050 IPR027396 DsrEFH-like YPA_RS17055 IPR003787 Sulphur relay, DsrE/F-like protein YPA_RS17055 IPR017462 Sulphur relay, TusC/DsrF YPA_RS17055 IPR027396 DsrEFH-like YPA_RS17060 IPR003787 Sulphur relay, DsrE/F-like protein YPA_RS17060 IPR017463 Sulphur relay, TusD/DsrE YPA_RS17060 IPR027396 DsrEFH-like YPA_RS17065 IPR013559 YheO-like YPA_RS17070 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal YPA_RS17070 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain YPA_RS17070 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type YPA_RS17075 IPR007236 SlyX YPA_RS17080 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain YPA_RS17080 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type YPA_RS17085 IPR012658 Conserved hypothetical protein CHP02443 YPA_RS17085 IPR013088 Zinc finger, NHR/GATA-type YPA_RS17090 IPR003148 Regulator of K+ conductance, N-terminal YPA_RS17090 IPR004771 K+/H+ exchanger YPA_RS17090 IPR006153 Cation/H+ exchanger YPA_RS17090 IPR016040 NAD(P)-binding domain YPA_RS17090 IPR020884 Glutathione-regulated potassium-efflux system protein KefB YPA_RS17095 IPR003680 Flavodoxin-like fold YPA_RS17095 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG YPA_RS17095 IPR029039 Flavoprotein-like YPA_RS17105 IPR001173 Glycosyltransferase 2-like YPA_RS17105 IPR029044 Nucleotide-diphospho-sugar transferases YPA_RS17110 IPR002201 Glycosyl transferase, family 9 YPA_RS17115 IPR003819 Taurine catabolism dioxygenase TauD/TfdA YPA_RS17120 IPR000515 MetI-like domain YPA_RS17125 IPR003439 ABC transporter-like YPA_RS17125 IPR003593 AAA+ ATPase domain YPA_RS17125 IPR017871 ABC transporter, conserved site YPA_RS17125 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS17130 IPR001638 Extracellular solute-binding protein, family 3 YPA_RS17130 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain YPA_RS17130 IPR010068 Taurine ABC transporter, periplasmic binding protein TauA YPA_RS17135 IPR001123 Lysine-type exporter protein (LYSE/YGGA) YPA_RS17140 IPR000073 Alpha/beta hydrolase fold-1 YPA_RS17140 IPR000952 Uncharacterised protein family UPF0017, hydrolase-like, conserved site YPA_RS17140 IPR012020 AB-hydrolase YheT, putative YPA_RS17140 IPR029058 Alpha/Beta hydrolase fold YPA_RS17145 IPR010648 Uncharacterised protein family UPF0270 YPA_RS17150 IPR006082 Phosphoribulokinase YPA_RS17150 IPR006083 Phosphoribulokinase/uridine kinase YPA_RS17150 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS17155 IPR010665 Protein of unknown function DUF1240 YPA_RS17160 IPR003718 OsmC/Ohr family YPA_RS17160 IPR015946 K homology domain-like, alpha/beta YPA_RS17165 IPR000595 Cyclic nucleotide-binding domain YPA_RS17165 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS17165 IPR012318 Helix-turn-helix motif, Crp-type YPA_RS17165 IPR014710 RmlC-like jelly roll fold YPA_RS17165 IPR018335 Transcription regulator HTH, Crp-type, conserved site YPA_RS17165 IPR018488 Cyclic nucleotide-binding, conserved site YPA_RS17165 IPR018490 Cyclic nucleotide-binding-like YPA_RS17170 IPR010020 Integral membrane protein, YccS/YhfK YPA_RS17170 IPR032692 YPA_RS17170 YPA_RS17175 IPR004636 Acetylornithine/Succinylornithine transaminase family YPA_RS17175 IPR005814 Aminotransferase class-III YPA_RS17175 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPA_RS17175 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPA_RS17175 IPR015424 Pyridoxal phosphate-dependent transferase YPA_RS17175 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria YPA_RS17180 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain YPA_RS17180 IPR017926 Glutamine amidotransferase YPA_RS17180 IPR029062 Class I glutamine amidotransferase-like YPA_RS17185 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS17185 IPR033186 YPA_RS17185 YPA_RS17190 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain YPA_RS17190 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site YPA_RS17190 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase YPA_RS17190 IPR029000 Cyclophilin-like domain YPA_RS17195 IPR001088 Glycoside hydrolase, family 4 YPA_RS17195 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal YPA_RS17195 IPR016040 NAD(P)-binding domain YPA_RS17195 IPR019802 Glycoside hydrolase, family 4, conserved site YPA_RS17195 IPR022616 Glycosyl hydrolase, family 4, C-terminal YPA_RS17200 IPR000843 Transcription regulator HTH, LacI YPA_RS17200 IPR010982 Lambda repressor-like, DNA-binding domain YPA_RS17200 IPR028082 Periplasmic binding protein-like I YPA_RS17205 IPR000531 TonB-dependent receptor, beta-barrel YPA_RS17205 IPR010100 TonB-dependent copper receptor YPA_RS17205 IPR012910 TonB-dependent receptor, plug YPA_RS17210 IPR011701 Major facilitator superfamily YPA_RS17210 IPR020846 Major facilitator superfamily domain YPA_RS17210 IPR023528 Major facilitator superfamily transporter, TsgA YPA_RS17215 IPR011059 Metal-dependent hydrolase, composite domain YPA_RS17215 IPR013108 Amidohydrolase 3 YPA_RS17215 IPR032466 YPA_RS17215 YPA_RS17220 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain YPA_RS17220 IPR006066 Nitrite/sulphite reductase iron-sulphur/siroheam-binding site YPA_RS17220 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain YPA_RS17220 IPR007419 BFD-like [2Fe-2S]-binding domain YPA_RS17220 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB YPA_RS17220 IPR017121 Nitrite reductase [NAD(P)H], large subunit YPA_RS17220 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPA_RS17225 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD YPA_RS17225 IPR017941 Rieske [2Fe-2S] iron-sulphur domain YPA_RS17230 IPR000292 Formate/nitrite transporter YPA_RS17230 IPR023271 Aquaporin-like YPA_RS17230 IPR024002 Formate/nitrite transporter, conserved site YPA_RS17235 IPR000878 Tetrapyrrole methylase YPA_RS17235 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site YPA_RS17235 IPR006366 Uroporphyrin-III C-methyltransferase YPA_RS17235 IPR006367 Sirohaem synthase, N-terminal YPA_RS17235 IPR012409 Sirohaem synthase YPA_RS17235 IPR014776 Tetrapyrrole methylase, subdomain 2 YPA_RS17235 IPR014777 Tetrapyrrole methylase, subdomain 1 YPA_RS17235 IPR016040 NAD(P)-binding domain YPA_RS17235 IPR019478 Sirohaem synthase, dimerisation domain YPA_RS17235 IPR028281 Siroheme synthase, central domain YPA_RS17240 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPA_RS17240 IPR002305 Aminoacyl-tRNA synthetase, class Ic YPA_RS17240 IPR002306 Tryptophan-tRNA ligase YPA_RS17240 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPA_RS17240 IPR024109 Tryptophan-tRNA ligase, bacterial-type YPA_RS17245 IPR006346 2-phosphoglycolate phosphatase, prokaryotic YPA_RS17245 IPR006439 HAD hydrolase, subfamily IA YPA_RS17245 IPR023198 Phosphoglycolate phosphatase, domain 2 YPA_RS17245 IPR023214 HAD-like domain YPA_RS17250 IPR000056 Ribulose-phosphate 3-epimerase-like YPA_RS17250 IPR011060 Ribulose-phosphate binding barrel YPA_RS17250 IPR013785 Aldolase-type TIM barrel YPA_RS17250 IPR026019 Ribulose-phosphate 3-epimerase YPA_RS17255 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPA_RS17255 IPR012263 Adenine modification methylase, M.EcoRV-type YPA_RS17255 IPR012327 D12 class N6 adenine-specific DNA methyltransferase YPA_RS17255 IPR023095 Adenine-specific methyltransferase, domain 2 YPA_RS17255 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPA_RS17260 IPR007730 Sporulation-related domain YPA_RS17260 IPR032899 YPA_RS17260 YPA_RS17265 IPR016037 3-dehydroquinate synthase AroB YPA_RS17265 IPR030960 YPA_RS17265 YPA_RS17265 IPR030963 YPA_RS17265 YPA_RS17270 IPR000623 Shikimate kinase/Threonine synthase-like 1 YPA_RS17270 IPR023000 Shikimate kinase, conserved site YPA_RS17270 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS17270 IPR031322 YPA_RS17270 YPA_RS17275 IPR001775 GspD/PilQ family YPA_RS17275 IPR004846 Type II/III secretion system YPA_RS17275 IPR005644 NolW-like YPA_RS17275 IPR013355 Type IV pilus secretin PilQ YPA_RS17285 IPR019684 Protein of unknown function DUF2531 YPA_RS17295 IPR007813 Fimbrial assembly PilN YPA_RS17300 IPR005883 Type IV pilus assembly protein PilM YPA_RS17305 IPR001264 Glycosyl transferase, family 51 YPA_RS17305 IPR001460 Penicillin-binding protein, transpeptidase YPA_RS17305 IPR012338 Beta-lactamase/transpeptidase-like YPA_RS17305 IPR012340 Nucleic acid-binding, OB-fold YPA_RS17305 IPR023346 Lysozyme-like domain YPA_RS17305 IPR031376 YPA_RS17305 YPA_RS17310 IPR000086 NUDIX hydrolase domain YPA_RS17310 IPR015797 NUDIX hydrolase domain-like YPA_RS17310 IPR020084 NUDIX hydrolase, conserved site YPA_RS17320 IPR010771 Intracellular growth attenuator IgaA YPA_RS17325 IPR006439 HAD hydrolase, subfamily IA YPA_RS17325 IPR023214 HAD-like domain YPA_RS17330 IPR002942 RNA-binding S4 domain YPA_RS17330 IPR025708 Heat shock protein 15 YPA_RS17335 IPR000397 Heat shock protein Hsp33 YPA_RS17335 IPR016153 Heat shock protein Hsp33, N-terminal YPA_RS17335 IPR016154 Heat shock protein Hsp33, C-terminal YPA_RS17335 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain YPA_RS17340 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising YPA_RS17340 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal YPA_RS17340 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal YPA_RS17340 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site YPA_RS17345 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPA_RS17345 IPR003660 HAMP linker domain YPA_RS17345 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPA_RS17345 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPA_RS17350 IPR001789 Signal transduction response regulator, receiver domain YPA_RS17350 IPR001867 Signal transduction response regulator, C-terminal YPA_RS17350 IPR011006 CheY-like superfamily YPA_RS17350 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS17350 IPR016032 Signal transduction response regulator, C-terminal effector YPA_RS17355 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal YPA_RS17355 IPR006358 Transcription elongation factor GreB YPA_RS17355 IPR018151 Transcription elongation factor, GreA/GreB, conserved site YPA_RS17355 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal YPA_RS17355 IPR023459 Transcription elongation factor GreA/GreB family YPA_RS17355 IPR028624 Transcription elongation factor GreA/GreB YPA_RS17360 IPR003029 Ribosomal protein S1, RNA-binding domain YPA_RS17360 IPR006641 YqgF/RNase H-like domain YPA_RS17360 IPR010994 RuvA domain 2-like YPA_RS17360 IPR012337 Ribonuclease H-like domain YPA_RS17360 IPR012340 Nucleic acid-binding, OB-fold YPA_RS17360 IPR018974 Tex-like protein, N-terminal YPA_RS17360 IPR022967 RNA-binding domain, S1 YPA_RS17360 IPR023097 Tex RuvX-like domain YPA_RS17360 IPR023319 Tex-like protein, HTH domain YPA_RS17360 IPR023323 Tex-like domain YPA_RS17360 IPR032639 YPA_RS17360 YPA_RS17370 IPR007167 Ferrous iron transporter FeoA domain YPA_RS17370 IPR008988 Transcriptional repressor, C-terminal YPA_RS17375 IPR003373 Ferrous iron transport protein B YPA_RS17375 IPR005225 Small GTP-binding protein domain YPA_RS17375 IPR011619 Ferrous iron transport protein B, N-terminal YPA_RS17375 IPR011640 Ferrous iron transport protein B, C-terminal YPA_RS17375 IPR011642 Nucleoside recognition Gate YPA_RS17375 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS17380 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS17380 IPR015102 Transcriptional regulator HTH-type, FeoC YPA_RS17380 IPR023732 Ferrous iron transport protein C YPA_RS17385 IPR010854 Domain of unknown function DUF1471 YPA_RS17385 IPR025543 Dodecin-like YPA_RS17390 IPR000073 Alpha/beta hydrolase fold-1 YPA_RS17390 IPR010076 Pimelyl-[acyl-carrier protein] methyl ester esterase YPA_RS17390 IPR029058 Alpha/Beta hydrolase fold YPA_RS17395 IPR000836 Phosphoribosyltransferase domain YPA_RS17395 IPR029057 Phosphoribosyltransferase-like YPA_RS17400 IPR000361 FeS cluster biogenesis YPA_RS17400 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal YPA_RS17400 IPR017726 Fe/S biogenesis protein NfuA YPA_RS17405 IPR003385 Glycoside hydrolase, family 77 YPA_RS17405 IPR013781 Glycoside hydrolase, catalytic domain YPA_RS17405 IPR017853 Glycoside hydrolase, superfamily YPA_RS17410 IPR000811 Glycosyl transferase, family 35 YPA_RS17410 IPR011833 Glycogen/starch/alpha-glucan phosphorylase YPA_RS17415 IPR000811 Glycosyl transferase, family 35 YPA_RS17420 IPR000792 Transcription regulator LuxR, C-terminal YPA_RS17420 IPR011990 Tetratricopeptide-like helical domain YPA_RS17420 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS17420 IPR016032 Signal transduction response regulator, C-terminal effector YPA_RS17420 IPR023768 Transcriptional regulator HTH-type, MalT YPA_RS17420 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS17425 IPR001763 Rhodanese-like domain YPA_RS17425 IPR023695 Thiosulfate sulfurtransferase, bacterial YPA_RS17430 IPR002610 Peptidase S54, rhomboid YPA_RS17430 IPR022732 Peptidase S54, GlpG peptidase, N-terminal YPA_RS17430 IPR022764 Peptidase S54, rhomboid domain YPA_RS17430 IPR023662 Rhomboid protease GlpG YPA_RS17435 IPR001034 HTH DeoR N-terminal domain YPA_RS17435 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS17435 IPR014036 DeoR C-terminal sensor domain YPA_RS17435 IPR018356 Transcription regulator, HTH DeoR-type, conserved site YPA_RS17440 IPR009057 Homeodomain-like YPA_RS17440 IPR010921 Trp repressor/replication initiator YPA_RS17440 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS17445 IPR001270 ClpA/B family YPA_RS17445 IPR002611 IstB-like ATP-binding protein YPA_RS17445 IPR003593 AAA+ ATPase domain YPA_RS17445 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS17445 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS17450 IPR001584 Integrase, catalytic core YPA_RS17450 IPR006120 Resolvase, HTH domain YPA_RS17450 IPR009057 Homeodomain-like YPA_RS17450 IPR012337 Ribonuclease H-like domain YPA_RS17455 IPR001584 Integrase, catalytic core YPA_RS17455 IPR012337 Ribonuclease H-like domain YPA_RS17455 IPR025948 HTH-like domain YPA_RS17460 IPR000014 PAS domain YPA_RS17460 IPR000160 GGDEF domain YPA_RS17460 IPR001633 EAL domain YPA_RS17460 IPR007892 CHASE4 YPA_RS17460 IPR013767 PAS fold YPA_RS17460 IPR029787 Nucleotide cyclase YPA_RS17470 IPR006143 RND efflux pump, membrane fusion protein YPA_RS17470 IPR032317 YPA_RS17470 YPA_RS17475 IPR001036 Acriflavin resistance protein YPA_RS17475 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 YPA_RS17475 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPA_RS17480 IPR012927 ShET2 enterotoxin, N-terminal YPA_RS17490 IPR005546 Autotransporter beta-domain YPA_RS17490 IPR006315 Outer membrane autotransporter barrel YPA_RS17490 IPR011050 Pectin lyase fold/virulence factor YPA_RS17490 IPR012332 P22 tailspike C-terminal domain-like YPA_RS17490 IPR024973 ESPR domain YPA_RS17495 IPR029487 Novel E3 ligase domain YPA_RS17495 IPR032674 YPA_RS17495 YPA_RS17495 IPR032675 YPA_RS17495 YPA_RS17500 IPR032674 YPA_RS17500 YPA_RS17500 IPR032675 YPA_RS17500 YPA_RS17510 IPR002686 Transposase IS200-like YPA_RS17515 IPR003591 Leucine-rich repeat, typical subtype YPA_RS17515 IPR029487 Novel E3 ligase domain YPA_RS17515 IPR032674 YPA_RS17515 YPA_RS17515 IPR032675 YPA_RS17515 YPA_RS17520 IPR004697 AbgT YPA_RS17525 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site YPA_RS17525 IPR002933 Peptidase M20 YPA_RS17525 IPR010161 Peptidase M20B, tripeptide aminopeptidase YPA_RS17525 IPR011650 Peptidase M20, dimerisation domain YPA_RS17530 IPR000531 TonB-dependent receptor, beta-barrel YPA_RS17530 IPR012910 TonB-dependent receptor, plug YPA_RS17535 IPR000873 AMP-dependent synthetase/ligase YPA_RS17535 IPR009081 Acyl carrier protein-like YPA_RS17535 IPR014030 Beta-ketoacyl synthase, N-terminal YPA_RS17535 IPR014031 Beta-ketoacyl synthase, C-terminal YPA_RS17535 IPR016039 Thiolase-like YPA_RS17535 IPR018201 Beta-ketoacyl synthase, active site YPA_RS17535 IPR020806 Polyketide synthase, phosphopantetheine-binding domain YPA_RS17535 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPA_RS17540 IPR001584 Integrase, catalytic core YPA_RS17540 IPR006120 Resolvase, HTH domain YPA_RS17540 IPR009057 Homeodomain-like YPA_RS17540 IPR012337 Ribonuclease H-like domain YPA_RS17545 IPR001270 ClpA/B family YPA_RS17545 IPR002611 IstB-like ATP-binding protein YPA_RS17545 IPR003593 AAA+ ATPase domain YPA_RS17545 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS17545 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS17550 IPR000873 AMP-dependent synthetase/ligase YPA_RS17550 IPR001242 Condensation domain YPA_RS17550 IPR006162 Phosphopantetheine attachment site YPA_RS17550 IPR009081 Acyl carrier protein-like YPA_RS17550 IPR010071 Amino acid adenylation domain YPA_RS17550 IPR013624 Non-ribosomal peptide synthetase YPA_RS17550 IPR020845 AMP-binding, conserved site YPA_RS17555 IPR000873 AMP-dependent synthetase/ligase YPA_RS17555 IPR009081 Acyl carrier protein-like YPA_RS17555 IPR010071 Amino acid adenylation domain YPA_RS17555 IPR020845 AMP-binding, conserved site YPA_RS17560 IPR000873 AMP-dependent synthetase/ligase YPA_RS17560 IPR001031 Thioesterase YPA_RS17560 IPR001242 Condensation domain YPA_RS17560 IPR006162 Phosphopantetheine attachment site YPA_RS17560 IPR009081 Acyl carrier protein-like YPA_RS17560 IPR010071 Amino acid adenylation domain YPA_RS17560 IPR013217 Methyltransferase type 12 YPA_RS17560 IPR013624 Non-ribosomal peptide synthetase YPA_RS17560 IPR020845 AMP-binding, conserved site YPA_RS17560 IPR029058 Alpha/Beta hydrolase fold YPA_RS17560 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPA_RS17565 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain YPA_RS17565 IPR016040 NAD(P)-binding domain YPA_RS17570 IPR000683 Oxidoreductase, N-terminal YPA_RS17570 IPR010091 Thiazolinyl imide reductase YPA_RS17570 IPR016040 NAD(P)-binding domain YPA_RS17575 IPR001031 Thioesterase YPA_RS17575 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS YPA_RS17575 IPR029058 Alpha/Beta hydrolase fold YPA_RS17580 IPR011701 Major facilitator superfamily YPA_RS17580 IPR020846 Major facilitator superfamily domain YPA_RS17585 IPR003439 ABC transporter-like YPA_RS17585 IPR003593 AAA+ ATPase domain YPA_RS17585 IPR011527 ABC transporter type 1, transmembrane domain YPA_RS17585 IPR017871 ABC transporter, conserved site YPA_RS17585 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS17590 IPR003439 ABC transporter-like YPA_RS17590 IPR003593 AAA+ ATPase domain YPA_RS17590 IPR011527 ABC transporter type 1, transmembrane domain YPA_RS17590 IPR017871 ABC transporter, conserved site YPA_RS17590 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS17605 IPR003474 Gluconate transporter YPA_RS17615 IPR005546 Autotransporter beta-domain YPA_RS17615 IPR006315 Outer membrane autotransporter barrel YPA_RS17615 IPR011050 Pectin lyase fold/virulence factor YPA_RS17615 IPR012332 P22 tailspike C-terminal domain-like YPA_RS17620 IPR006531 Gp5 N-terminal YPA_RS17620 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPA_RS17620 IPR010609 Gp5, C-terminal YPA_RS17620 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPA_RS17625 IPR011990 Tetratricopeptide-like helical domain YPA_RS17630 IPR001826 RHS protein YPA_RS17630 IPR006530 YD repeat YPA_RS17630 IPR022385 Rhs repeat-associated core YPA_RS17630 IPR031325 YPA_RS17630 YPA_RS17645 IPR001898 Sodium/sulphate symporter YPA_RS17645 IPR031312 YPA_RS17645 YPA_RS17650 IPR000843 Transcription regulator HTH, LacI YPA_RS17650 IPR010982 Lambda repressor-like, DNA-binding domain YPA_RS17650 IPR028082 Periplasmic binding protein-like I YPA_RS17655 IPR001547 Glycoside hydrolase, family 5 YPA_RS17655 IPR013781 Glycoside hydrolase, catalytic domain YPA_RS17655 IPR017853 Glycoside hydrolase, superfamily YPA_RS17660 IPR001584 Integrase, catalytic core YPA_RS17660 IPR012337 Ribonuclease H-like domain YPA_RS17660 IPR025948 HTH-like domain YPA_RS17665 IPR009057 Homeodomain-like YPA_RS17665 IPR010921 Trp repressor/replication initiator YPA_RS17665 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS17670 IPR010272 Type VI secretion system, VCA0110 YPA_RS17675 IPR010732 Protein of unknown function DUF1305 YPA_RS17680 IPR008984 SMAD/FHA domain YPA_RS17680 IPR017735 Type VI secretion system, FHA domain-containing protein YPA_RS17685 IPR017734 Type VI secretion system, lipoprotein SciN YPA_RS17690 IPR010263 Protein of unknown function DUF876 YPA_RS17695 IPR017732 Type IV / VI secretion system, DotU YPA_RS17700 IPR001270 ClpA/B family YPA_RS17700 IPR003593 AAA+ ATPase domain YPA_RS17700 IPR003959 ATPase, AAA-type, core YPA_RS17700 IPR004176 Clp, N-terminal YPA_RS17700 IPR017729 Type VI secretion system, ATPase ClpV1 YPA_RS17700 IPR018368 ClpA/B, conserved site 1 YPA_RS17700 IPR019489 Clp ATPase, C-terminal YPA_RS17700 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS17700 IPR028299 ClpA/B, conserved site 2 YPA_RS17705 IPR002197 DNA binding HTH domain, Fis-type YPA_RS17705 IPR009057 Homeodomain-like YPA_RS17710 IPR017738 Type VI secretion system-associated, VCA0118 YPA_RS17715 IPR010657 ImpA, N-terminal YPA_RS17715 IPR017739 Type VI secretion system-associated, VCA0119 YPA_RS17720 IPR009612 ImcF-related YPA_RS17720 IPR010623 Domain of unknown function DUF1215 YPA_RS17720 IPR017731 Type VI secretion system, IcmF YPA_RS17720 IPR025743 ImcF-related, N-terminal domain YPA_RS17720 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS17725 IPR010657 ImpA, N-terminal YPA_RS17730 IPR021069 ImpA, C-terminal YPA_RS17735 IPR006531 Gp5 N-terminal YPA_RS17735 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPA_RS17735 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPA_RS17740 IPR014894 Protein DcrB YPA_RS17740 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich YPA_RS17745 IPR006530 YD repeat YPA_RS17745 IPR008727 PAAR motif YPA_RS17745 IPR031325 YPA_RS17745 YPA_RS17750 IPR001826 RHS protein YPA_RS17750 IPR022385 Rhs repeat-associated core YPA_RS17750 IPR032869 YPA_RS17750 YPA_RS17755 IPR018958 SMI1/KNR4 like domain YPA_RS17760 IPR014944 Toxin SymE-like YPA_RS17765 IPR014944 Toxin SymE-like YPA_RS17770 IPR001387 Cro/C1-type helix-turn-helix domain YPA_RS17770 IPR010982 Lambda repressor-like, DNA-binding domain YPA_RS17780 IPR006531 Gp5 N-terminal YPA_RS17780 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPA_RS17780 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPA_RS17785 IPR014894 Protein DcrB YPA_RS17785 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich YPA_RS17790 IPR001826 RHS protein YPA_RS17790 IPR006530 YD repeat YPA_RS17790 IPR008727 PAAR motif YPA_RS17790 IPR022385 Rhs repeat-associated core YPA_RS17790 IPR031325 YPA_RS17790 YPA_RS17800 IPR013022 Xylose isomerase-like, TIM barrel domain YPA_RS17810 IPR001270 ClpA/B family YPA_RS17810 IPR002611 IstB-like ATP-binding protein YPA_RS17810 IPR003593 AAA+ ATPase domain YPA_RS17810 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS17810 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS17815 IPR001584 Integrase, catalytic core YPA_RS17815 IPR006120 Resolvase, HTH domain YPA_RS17815 IPR009057 Homeodomain-like YPA_RS17815 IPR012337 Ribonuclease H-like domain YPA_RS17820 IPR000182 GNAT domain YPA_RS17820 IPR016181 Acyl-CoA N-acyltransferase YPA_RS17825 IPR004566 Bacterial pantothenate kinase YPA_RS17825 IPR006083 Phosphoribulokinase/uridine kinase YPA_RS17825 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS17830 IPR003142 Biotin protein ligase, C-terminal YPA_RS17830 IPR004143 Biotin/lipoate A/B protein ligase YPA_RS17830 IPR004408 Biotin--acetyl-CoA-carboxylase ligase YPA_RS17830 IPR004409 Biotin operon repressor, helix-turn-helix domain YPA_RS17830 IPR008988 Transcriptional repressor, C-terminal YPA_RS17830 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS17830 IPR013196 Helix-turn-helix, type 11 YPA_RS17830 IPR030855 YPA_RS17830 YPA_RS17835 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase YPA_RS17835 IPR006094 FAD linked oxidase, N-terminal YPA_RS17835 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal YPA_RS17835 IPR016166 FAD-binding, type 2 YPA_RS17835 IPR016167 FAD-binding, type 2, subdomain 1 YPA_RS17835 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 YPA_RS17865 IPR001226 Flavodoxin, conserved site YPA_RS17865 IPR026816 Flavodoxin domain YPA_RS17865 IPR029039 Flavoprotein-like YPA_RS17870 IPR003445 Cation transporter YPA_RS17870 IPR004772 Potassium uptake protein TrkH family YPA_RS17875 IPR000640 Translation elongation factor EFG, V domain YPA_RS17875 IPR001498 Impact, N-terminal YPA_RS17875 IPR009022 Elongation factor G, III-V domain YPA_RS17875 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal YPA_RS17875 IPR020568 Ribosomal protein S5 domain 2-type fold YPA_RS17875 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site YPA_RS17875 IPR023582 Impact family YPA_RS17880 IPR002686 Transposase IS200-like YPA_RS17885 IPR001498 Impact, N-terminal YPA_RS17885 IPR020568 Ribosomal protein S5 domain 2-type fold YPA_RS17885 IPR023582 Impact family YPA_RS17890 IPR000994 Peptidase M24, structural domain YPA_RS17890 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site YPA_RS17890 IPR022846 Xaa-Pro dipeptidase YPA_RS17895 IPR001753 Crotonase superfamily YPA_RS17895 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal YPA_RS17895 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding YPA_RS17895 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site YPA_RS17895 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YPA_RS17895 IPR012799 Fatty oxidation complex, alpha subunit FadB YPA_RS17895 IPR013328 Dehydrogenase, multihelical YPA_RS17895 IPR016040 NAD(P)-binding domain YPA_RS17895 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site YPA_RS17895 IPR029045 ClpP/crotonase-like domain YPA_RS17900 IPR002155 Thiolase YPA_RS17900 IPR012805 Acetyl-CoA C-acyltransferase FadA YPA_RS17900 IPR016039 Thiolase-like YPA_RS17900 IPR020610 Thiolase, active site YPA_RS17900 IPR020613 Thiolase, conserved site YPA_RS17900 IPR020615 Thiolase, acyl-enzyme intermediate active site YPA_RS17900 IPR020616 Thiolase, N-terminal YPA_RS17900 IPR020617 Thiolase, C-terminal YPA_RS17905 IPR001221 Phenol hydroxylase reductase YPA_RS17905 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPA_RS17905 IPR008333 Oxidoreductase, FAD-binding domain YPA_RS17905 IPR017938 Riboflavin synthase-like beta-barrel YPA_RS17910 IPR002830 UbiD decarboxylyase family YPA_RS17910 IPR012349 FMN-binding split barrel YPA_RS17910 IPR023677 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YPA_RS17915 IPR005824 KOW YPA_RS17915 IPR006645 NusG, N-terminal YPA_RS17915 IPR010215 Transcription antitermination protein RfaH YPA_RS17920 IPR001731 Porphobilinogen synthase YPA_RS17920 IPR013785 Aldolase-type TIM barrel YPA_RS17920 IPR030656 YPA_RS17920 YPA_RS17925 IPR001130 TatD family YPA_RS17925 IPR018228 Deoxyribonuclease, TatD-related, conserved site YPA_RS17925 IPR032466 YPA_RS17925 YPA_RS17930 IPR001270 ClpA/B family YPA_RS17930 IPR002611 IstB-like ATP-binding protein YPA_RS17930 IPR003593 AAA+ ATPase domain YPA_RS17930 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS17930 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS17935 IPR001584 Integrase, catalytic core YPA_RS17935 IPR006120 Resolvase, HTH domain YPA_RS17935 IPR009057 Homeodomain-like YPA_RS17935 IPR012337 Ribonuclease H-like domain YPA_RS17950 IPR003997 RTX secretion protein D, Gram-negative bacteria YPA_RS17950 IPR006144 Secretion protein HlyD, conserved site YPA_RS17950 IPR011053 Single hybrid motif YPA_RS17955 IPR003439 ABC transporter-like YPA_RS17955 IPR003593 AAA+ ATPase domain YPA_RS17955 IPR005074 Peptidase C39, bacteriocin processing YPA_RS17955 IPR011527 ABC transporter type 1, transmembrane domain YPA_RS17955 IPR017871 ABC transporter, conserved site YPA_RS17955 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS17960 IPR002686 Transposase IS200-like YPA_RS17965 IPR009252 Cell division protein ZapB YPA_RS17975 IPR000425 Major intrinsic protein YPA_RS17975 IPR022357 Major intrinsic protein, conserved site YPA_RS17975 IPR023271 Aquaporin-like YPA_RS17980 IPR000577 YPA_RS17980 YPA_RS17980 IPR005999 Glycerol kinase YPA_RS17980 IPR018483 Carbohydrate kinase, FGGY, conserved site YPA_RS17980 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPA_RS17980 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPA_RS17985 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase YPA_RS17990 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPA_RS17990 IPR008333 Oxidoreductase, FAD-binding domain YPA_RS17990 IPR017938 Riboflavin synthase-like beta-barrel YPA_RS17995 IPR008523 Lactobacillus phage LBR48, DUF805 YPA_RS18000 IPR009918 Protein of unknown function DUF1454 YPA_RS18005 IPR000652 Triosephosphate isomerase YPA_RS18005 IPR013785 Aldolase-type TIM barrel YPA_RS18005 IPR020861 Triosephosphate isomerase, active site YPA_RS18005 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic YPA_RS18010 IPR000847 Transcription regulator HTH, LysR YPA_RS18010 IPR005119 LysR, substrate-binding YPA_RS18010 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS18015 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related YPA_RS18015 IPR024078 Putative deacetylase LmbE-like domain YPA_RS18020 IPR005493 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase YPA_RS18020 IPR014165 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase YPA_RS18025 IPR001898 Sodium/sulphate symporter YPA_RS18025 IPR030676 YPA_RS18025 YPA_RS18035 IPR000957 Sulphate/thiosulphate-binding, conserved site YPA_RS18035 IPR005669 Thiosulphate/Sulfate-binding protein YPA_RS18040 IPR000023 Phosphofructokinase domain YPA_RS18040 IPR012003 ATP-dependent phosphofructokinase, prokaryotic-type YPA_RS18040 IPR012828 6-phosphofructokinase YPA_RS18040 IPR015912 Phosphofructokinase, conserved site YPA_RS18040 IPR022953 Phosphofructokinase YPA_RS18045 IPR002524 Cation efflux protein YPA_RS18045 IPR023783 Cation efflux pump FieF YPA_RS18045 IPR027469 Cation efflux protein transmembrane domain YPA_RS18045 IPR027470 Cation efflux protein cytoplasmic domain YPA_RS18050 IPR006842 Transposase (putative), YhgA-like YPA_RS18050 IPR010106 Conserved hypothetical protein CHP01784 YPA_RS18055 IPR012899 LTXXQ motif family protein YPA_RS18060 IPR001789 Signal transduction response regulator, receiver domain YPA_RS18060 IPR001867 Signal transduction response regulator, C-terminal YPA_RS18060 IPR011006 CheY-like superfamily YPA_RS18060 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS18065 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPA_RS18065 IPR003660 HAMP linker domain YPA_RS18065 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPA_RS18065 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPA_RS18065 IPR032404 YPA_RS18065 YPA_RS18070 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site YPA_RS18070 IPR004026 Ada DNA repair, metal-binding YPA_RS18070 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain YPA_RS18070 IPR009057 Homeodomain-like YPA_RS18070 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS18070 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding YPA_RS18070 IPR016221 Bifunctional regulatory protein Ada YPA_RS18070 IPR018060 DNA binding HTH domain, AraC-type YPA_RS18075 IPR001537 tRNA/rRNA methyltransferase, SpoU type YPA_RS18075 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase YPA_RS18075 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPA_RS18075 IPR029028 Alpha/beta knot methyltransferases YPA_RS18080 IPR001451 Bacterial transferase hexapeptide repeat YPA_RS18080 IPR005881 Serine O-acetyltransferase YPA_RS18080 IPR010493 Serine acetyltransferase, N-terminal YPA_RS18080 IPR011004 Trimeric LpxA-like YPA_RS18080 IPR018357 Hexapeptide transferase, conserved site YPA_RS18090 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal YPA_RS18090 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent YPA_RS18090 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YPA_RS18090 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal YPA_RS18090 IPR013328 Dehydrogenase, multihelical YPA_RS18090 IPR016040 NAD(P)-binding domain YPA_RS18090 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPA_RS18095 IPR003708 Bacterial protein export chaperone SecB YPA_RS18100 IPR002109 Glutaredoxin YPA_RS18100 IPR011767 Glutaredoxin active site YPA_RS18100 IPR011900 Glutaredoxin, GrxC YPA_RS18100 IPR012336 Thioredoxin-like fold YPA_RS18100 IPR014025 Glutaredoxin subgroup YPA_RS18105 IPR001763 Rhodanese-like domain YPA_RS18110 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent YPA_RS18110 IPR006124 Metalloenzyme YPA_RS18110 IPR011258 BPG-independent PGAM, N-terminal YPA_RS18110 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha YPA_RS18110 IPR017850 Alkaline-phosphatase-like, core domain YPA_RS18115 IPR011055 Duplicated hybrid motif YPA_RS18115 IPR016047 Peptidase M23 YPA_RS18125 IPR002085 Alcohol dehydrogenase superfamily, zinc-type YPA_RS18125 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site YPA_RS18125 IPR004627 L-threonine 3-dehydrogenase YPA_RS18125 IPR011032 GroES (chaperonin 10)-like YPA_RS18125 IPR013149 Alcohol dehydrogenase, C-terminal YPA_RS18125 IPR013154 Alcohol dehydrogenase GroES-like YPA_RS18125 IPR016040 NAD(P)-binding domain YPA_RS18125 IPR020843 Polyketide synthase, enoylreductase YPA_RS18130 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site YPA_RS18130 IPR004839 Aminotransferase, class I/classII YPA_RS18130 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase YPA_RS18130 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPA_RS18130 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPA_RS18130 IPR015424 Pyridoxal phosphate-dependent transferase YPA_RS18135 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain YPA_RS18135 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase YPA_RS18135 IPR016040 NAD(P)-binding domain YPA_RS18140 IPR002201 Glycosyl transferase, family 9 YPA_RS18140 IPR011910 Lipopolysaccharide heptosyltransferase II YPA_RS18145 IPR002201 Glycosyl transferase, family 9 YPA_RS18145 IPR011908 Lipopolysaccharide heptosyltransferase I YPA_RS18150 IPR001296 Glycosyl transferase, family 1 YPA_RS18150 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal YPA_RS18155 IPR001173 Glycosyltransferase 2-like YPA_RS18155 IPR029044 Nucleotide-diphospho-sugar transferases YPA_RS18160 IPR001980 Coenzyme A biosynthesis protein YPA_RS18160 IPR004821 Cytidyltransferase-like domain YPA_RS18160 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPA_RS18165 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase YPA_RS18165 IPR010979 Ribosomal protein S13-like, H2TH YPA_RS18165 IPR012319 DNA glycosylase/AP lyase, catalytic domain YPA_RS18165 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding YPA_RS18165 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site YPA_RS18165 IPR020629 Formamidopyrimidine-DNA glycosylase YPA_RS18170 IPR001705 Ribosomal protein L33 YPA_RS18170 IPR011332 Zinc-binding ribosomal protein YPA_RS18170 IPR018264 Ribosomal protein L33, conserved site YPA_RS18175 IPR001383 Ribosomal protein L28 YPA_RS18175 IPR026569 Ribosomal protein L28/L24 YPA_RS18180 IPR001405 RadC protein YPA_RS18180 IPR010994 RuvA domain 2-like YPA_RS18180 IPR020891 Uncharacterised protein family UPF0758, conserved site YPA_RS18180 IPR022820 Uncharacterised protein family UPF0758, YicR subfamily YPA_RS18180 IPR025657 RadC-like JAB domain YPA_RS18185 IPR003382 Flavoprotein YPA_RS18185 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC YPA_RS18185 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal YPA_RS18190 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase YPA_RS18190 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase YPA_RS18190 IPR029054 dUTPase-like YPA_RS18195 IPR001647 DNA-binding HTH domain, TetR-type YPA_RS18195 IPR009057 Homeodomain-like YPA_RS18195 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal YPA_RS18195 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal YPA_RS18195 IPR023769 Nucleoid occlusion factor SlmA YPA_RS18195 IPR023772 DNA-binding HTH domain, TetR-type, conserved site YPA_RS18200 IPR000836 Phosphoribosyltransferase domain YPA_RS18200 IPR004467 Orotate phosphoribosyl transferase domain YPA_RS18200 IPR023031 Orotate phosphoribosyltransferase YPA_RS18200 IPR029057 Phosphoribosyltransferase-like YPA_RS18205 IPR001247 Exoribonuclease, phosphorolytic domain 1 YPA_RS18205 IPR002381 Ribonuclease phosphorolytic, bacterial-type YPA_RS18205 IPR015847 Exoribonuclease, phosphorolytic domain 2 YPA_RS18205 IPR018336 Ribonuclease PH, conserved site YPA_RS18205 IPR020568 Ribosomal protein S5 domain 2-type fold YPA_RS18205 IPR027408 PNPase/RNase PH domain YPA_RS18210 IPR005229 Conserved hypothetical protein CHP00255 YPA_RS18210 IPR013527 YicC-like, N-terminal YPA_RS18210 IPR013551 Domain of unknown function DUF1732 YPA_RS18215 IPR005115 Uncharacterised domain UPF0126 YPA_RS18220 IPR004150 NAD-dependent DNA ligase, OB-fold YPA_RS18220 IPR010994 RuvA domain 2-like YPA_RS18220 IPR012340 Nucleic acid-binding, OB-fold YPA_RS18220 IPR013839 NAD-dependent DNA ligase, adenylation YPA_RS18220 IPR013840 NAD-dependent DNA ligase, N-terminal YPA_RS18220 IPR020923 DNA ligase B YPA_RS18225 IPR008145 Guanylate kinase/L-type calcium channel beta subunit YPA_RS18225 IPR017665 Guanylate kinase YPA_RS18225 IPR020590 Guanylate kinase, conserved site YPA_RS18225 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS18230 IPR003716 DNA-directed RNA polymerase, omega subunit YPA_RS18230 IPR006110 RNA polymerase, subunit omega/K/RPB6 YPA_RS18230 IPR012293 RNA polymerase subunit, RPB6/omega YPA_RS18235 IPR002912 ACT domain YPA_RS18235 IPR003607 HD/PDEase domain YPA_RS18235 IPR004095 TGS YPA_RS18235 IPR004811 RelA/SpoT family YPA_RS18235 IPR007685 RelA/SpoT YPA_RS18235 IPR012675 Beta-grasp domain YPA_RS18235 IPR012676 TGS-like YPA_RS18240 IPR001537 tRNA/rRNA methyltransferase, SpoU type YPA_RS18240 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal YPA_RS18240 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPA_RS18240 IPR029028 Alpha/beta knot methyltransferases YPA_RS18245 IPR001650 Helicase, C-terminal YPA_RS18245 IPR004609 ATP-dependent DNA helicase RecG YPA_RS18245 IPR011545 DEAD/DEAH box helicase domain YPA_RS18245 IPR012340 Nucleic acid-binding, OB-fold YPA_RS18245 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YPA_RS18245 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS18245 IPR033454 YPA_RS18245 YPA_RS18250 IPR004445 Sodium/glutamate symporter YPA_RS18255 IPR006042 Xanthine/uracil permease YPA_RS18255 IPR006043 Xanthine/uracil/vitamin C permease YPA_RS18255 IPR017588 Xanthine permease YPA_RS18265 IPR000182 GNAT domain YPA_RS18265 IPR012660 Thioesterase, putative YPA_RS18265 IPR016181 Acyl-CoA N-acyltransferase YPA_RS18265 IPR029069 HotDog domain YPA_RS18270 IPR001584 Integrase, catalytic core YPA_RS18270 IPR006120 Resolvase, HTH domain YPA_RS18270 IPR009057 Homeodomain-like YPA_RS18270 IPR012337 Ribonuclease H-like domain YPA_RS18275 IPR001270 ClpA/B family YPA_RS18275 IPR002611 IstB-like ATP-binding protein YPA_RS18275 IPR003593 AAA+ ATPase domain YPA_RS18275 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS18275 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS18280 IPR003732 D-tyrosyl-tRNA(Tyr) deacylase YPA_RS18280 IPR023509 D-Tyr tRNAtyr deacylase-like domain YPA_RS18285 IPR017039 Virulence factor BrkB YPA_RS18285 IPR023679 Uncharacterised protein family UPF0761, bacterial YPA_RS18290 IPR006439 HAD hydrolase, subfamily IA YPA_RS18290 IPR023198 Phosphoglycolate phosphatase, domain 2 YPA_RS18290 IPR023214 HAD-like domain YPA_RS18295 IPR000640 Translation elongation factor EFG, V domain YPA_RS18295 IPR000795 Elongation factor, GTP-binding domain YPA_RS18295 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 YPA_RS18295 IPR005225 Small GTP-binding protein domain YPA_RS18295 IPR006298 GTP-binding protein TypA YPA_RS18295 IPR009000 Translation protein, beta-barrel domain YPA_RS18295 IPR009022 Elongation factor G, III-V domain YPA_RS18295 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS18295 IPR031157 YPA_RS18295 YPA_RS18305 IPR001637 Glutamine synthetase class-I, adenylation site YPA_RS18305 IPR004809 Glutamine synthetase type I YPA_RS18305 IPR008146 Glutamine synthetase, catalytic domain YPA_RS18305 IPR008147 Glutamine synthetase, beta-Grasp YPA_RS18305 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain YPA_RS18305 IPR027302 Glutamine synthetase, N-terminal conserved site YPA_RS18305 IPR027303 Glutamine synthetase, glycine-rich site YPA_RS18315 IPR002686 Transposase IS200-like YPA_RS18320 IPR000014 PAS domain YPA_RS18320 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPA_RS18320 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPA_RS18320 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPA_RS18320 IPR013767 PAS fold YPA_RS18325 IPR001789 Signal transduction response regulator, receiver domain YPA_RS18325 IPR002078 RNA polymerase sigma factor 54 interaction domain YPA_RS18325 IPR002197 DNA binding HTH domain, Fis-type YPA_RS18325 IPR003593 AAA+ ATPase domain YPA_RS18325 IPR009057 Homeodomain-like YPA_RS18325 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) YPA_RS18325 IPR011006 CheY-like superfamily YPA_RS18325 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YPA_RS18325 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPA_RS18325 IPR025944 Sigma-54 interaction domain, conserved site YPA_RS18325 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS18330 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN YPA_RS18330 IPR006638 Elongator protein 3/MiaB/NifB YPA_RS18330 IPR007197 Radical SAM YPA_RS18330 IPR010723 HemN, C-terminal domain YPA_RS18330 IPR023404 Radical SAM, alpha/beta horseshoe YPA_RS18335 IPR007336 Der GTPase activator YPA_RS18340 IPR006073 GTP binding domain YPA_RS18340 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC YPA_RS18340 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS18345 IPR002686 Transposase IS200-like YPA_RS18355 IPR001098 DNA-directed DNA polymerase, family A, palm domain YPA_RS18355 IPR002298 DNA polymerase A YPA_RS18355 IPR002421 5'-3' exonuclease, N-terminal YPA_RS18355 IPR002562 3'-5' exonuclease domain YPA_RS18355 IPR008918 Helix-hairpin-helix motif, class 2 YPA_RS18355 IPR012337 Ribonuclease H-like domain YPA_RS18355 IPR018320 DNA polymerase 1 YPA_RS18355 IPR019760 DNA-directed DNA polymerase, family A, conserved site YPA_RS18355 IPR020045 5'-3' exonuclease, C-terminal domain YPA_RS18355 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal YPA_RS18355 IPR029060 PIN domain-like YPA_RS18360 IPR001853 DSBA-like thioredoxin domain YPA_RS18360 IPR012336 Thioredoxin-like fold YPA_RS18360 IPR017937 Thioredoxin, conserved site YPA_RS18360 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL YPA_RS18365 IPR002575 Aminoglycoside phosphotransferase YPA_RS18365 IPR011009 Protein kinase-like domain YPA_RS18365 IPR032882 YPA_RS18365 YPA_RS18370 IPR009383 Protein of unknown function DUF1040 YPA_RS18375 IPR013482 Molybdenum cofactor guanylyltransferase YPA_RS18375 IPR025877 MobA-like NTP transferase domain YPA_RS18375 IPR029044 Nucleotide-diphospho-sugar transferases YPA_RS18380 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain YPA_RS18380 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS18385 IPR001207 Transposase, mutator type YPA_RS18415 IPR001584 Integrase, catalytic core YPA_RS18415 IPR006120 Resolvase, HTH domain YPA_RS18415 IPR009057 Homeodomain-like YPA_RS18415 IPR012337 Ribonuclease H-like domain YPA_RS18420 IPR001270 ClpA/B family YPA_RS18420 IPR002611 IstB-like ATP-binding protein YPA_RS18420 IPR003593 AAA+ ATPase domain YPA_RS18420 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS18420 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS18425 IPR000086 NUDIX hydrolase domain YPA_RS18425 IPR003561 Mutator MutT YPA_RS18425 IPR015797 NUDIX hydrolase domain-like YPA_RS18425 IPR020084 NUDIX hydrolase, conserved site YPA_RS18425 IPR020476 NUDIX hydrolase YPA_RS18430 IPR000185 Protein translocase subunit SecA YPA_RS18430 IPR004027 SEC-C motif YPA_RS18430 IPR011115 SecA DEAD-like, N-terminal YPA_RS18430 IPR011116 SecA Wing/Scaffold YPA_RS18430 IPR011130 SecA preprotein, cross-linking domain YPA_RS18430 IPR020937 SecA conserved site YPA_RS18430 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS18435 IPR009502 Secretion monitor YPA_RS18440 IPR007922 Protein of unknown function DUF721/UPF0232 YPA_RS18445 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase YPA_RS18445 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal YPA_RS18445 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal YPA_RS18445 IPR020568 Ribosomal protein S5 domain 2-type fold YPA_RS18450 IPR000158 Cell division protein FtsZ YPA_RS18450 IPR003008 Tubulin/FtsZ, GTPase domain YPA_RS18450 IPR008280 Tubulin/FtsZ, C-terminal YPA_RS18450 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain YPA_RS18450 IPR020805 Cell division protein FtsZ, conserved site YPA_RS18450 IPR024757 Cell division protein FtsZ, C-terminal YPA_RS18455 IPR003494 SHS2 domain inserted in FtsA YPA_RS18455 IPR020823 Cell division protein FtsA YPA_RS18460 IPR005548 Cell division protein FtsQ/DivIB YPA_RS18460 IPR013685 Polypeptide-transport-associated, FtsQ-type YPA_RS18460 IPR026579 Cell division protein FtsQ YPA_RS18465 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site YPA_RS18465 IPR005905 D-alanine--D-alanine ligase YPA_RS18465 IPR011095 D-alanine--D-alanine ligase, C-terminal YPA_RS18465 IPR011127 D-alanine--D-alanine ligase, N-terminal domain YPA_RS18465 IPR013815 ATP-grasp fold, subdomain 1 YPA_RS18465 IPR013816 ATP-grasp fold, subdomain 2 YPA_RS18465 IPR016185 Pre-ATP-grasp domain YPA_RS18470 IPR000713 Mur ligase, N-terminal YPA_RS18470 IPR004101 Mur ligase, C-terminal YPA_RS18470 IPR005758 UDP-N-acetylmuramate-alanine ligase YPA_RS18470 IPR013221 Mur ligase, central YPA_RS18470 IPR016040 NAD(P)-binding domain YPA_RS18475 IPR004276 Glycosyl transferase, family 28 YPA_RS18475 IPR006009 N-acetylglucosaminyltransferase, MurG YPA_RS18475 IPR007235 Glycosyl transferase, family 28, C-terminal YPA_RS18480 IPR001182 Cell cycle protein FtsW/RodA YPA_RS18480 IPR013437 Cell division protein FtsW YPA_RS18480 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site YPA_RS18485 IPR004101 Mur ligase, C-terminal YPA_RS18485 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase YPA_RS18485 IPR013221 Mur ligase, central YPA_RS18485 IPR016040 NAD(P)-binding domain YPA_RS18490 IPR000715 Glycosyl transferase, family 4 YPA_RS18490 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase YPA_RS18490 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site YPA_RS18495 IPR000713 Mur ligase, N-terminal YPA_RS18495 IPR004101 Mur ligase, C-terminal YPA_RS18495 IPR005863 UDP-MurNAc-pentapeptide synthetase YPA_RS18495 IPR013221 Mur ligase, central YPA_RS18500 IPR000713 Mur ligase, N-terminal YPA_RS18500 IPR004101 Mur ligase, C-terminal YPA_RS18500 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase YPA_RS18500 IPR013221 Mur ligase, central YPA_RS18505 IPR001460 Penicillin-binding protein, transpeptidase YPA_RS18505 IPR005311 Penicillin-binding protein, dimerisation domain YPA_RS18505 IPR012338 Beta-lactamase/transpeptidase-like YPA_RS18510 IPR011922 Cell division protein FtsL YPA_RS18515 IPR002903 Ribosomal RNA small subunit methyltransferase H YPA_RS18515 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain YPA_RS18515 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPA_RS18520 IPR003444 MraZ YPA_RS18520 IPR020603 MraZ domain YPA_RS18525 IPR010574 L-alanine exporter AlaE YPA_RS18530 IPR000843 Transcription regulator HTH, LacI YPA_RS18530 IPR001761 Periplasmic binding protein/LacI sugar binding domain YPA_RS18530 IPR010982 Lambda repressor-like, DNA-binding domain YPA_RS18530 IPR012781 D-fructose-responsive transcription factor YPA_RS18530 IPR028082 Periplasmic binding protein-like I YPA_RS18540 IPR002686 Transposase IS200-like YPA_RS18545 IPR002912 ACT domain YPA_RS18545 IPR004789 Acetolactate synthase, small subunit YPA_RS18545 IPR019455 Acetolactate synthase, small subunit, C-terminal YPA_RS18550 IPR000399 TPP-binding enzyme, conserved site YPA_RS18550 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YPA_RS18550 IPR012000 Thiamine pyrophosphate enzyme, central domain YPA_RS18550 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain YPA_RS18550 IPR012846 Acetolactate synthase, large subunit, biosynthetic YPA_RS18550 IPR029035 DHS-like NAD/FAD-binding domain YPA_RS18550 IPR029061 Thiamin diphosphate-binding fold YPA_RS18560 IPR000873 AMP-dependent synthetase/ligase YPA_RS18560 IPR020845 AMP-binding, conserved site YPA_RS18570 IPR000847 Transcription regulator HTH, LysR YPA_RS18570 IPR005119 LysR, substrate-binding YPA_RS18570 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS18580 IPR002686 Transposase IS200-like YPA_RS18585 IPR000891 Pyruvate carboxyltransferase YPA_RS18585 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site YPA_RS18585 IPR005671 2-isopropylmalate synthase, bacterial-type YPA_RS18585 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain YPA_RS18585 IPR013785 Aldolase-type TIM barrel YPA_RS18590 IPR001804 Isocitrate and isopropylmalate dehydrogenases family YPA_RS18590 IPR004429 Isopropylmalate dehydrogenase YPA_RS18590 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site YPA_RS18590 IPR024084 Isopropylmalate dehydrogenase-like domain YPA_RS18595 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha YPA_RS18595 IPR004430 3-isopropylmalate dehydratase, large subunit YPA_RS18595 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 YPA_RS18595 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 YPA_RS18595 IPR015937 Aconitase/isopropylmalate dehydratase YPA_RS18595 IPR018136 Aconitase family, 4Fe-4S cluster binding site YPA_RS18600 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel YPA_RS18600 IPR004431 3-isopropylmalate dehydratase, small subunit YPA_RS18600 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YPA_RS18600 IPR015937 Aconitase/isopropylmalate dehydratase YPA_RS18605 IPR020846 Major facilitator superfamily domain YPA_RS18610 IPR001584 Integrase, catalytic core YPA_RS18610 IPR006120 Resolvase, HTH domain YPA_RS18610 IPR009057 Homeodomain-like YPA_RS18610 IPR012337 Ribonuclease H-like domain YPA_RS18615 IPR001270 ClpA/B family YPA_RS18615 IPR002611 IstB-like ATP-binding protein YPA_RS18615 IPR003593 AAA+ ATPase domain YPA_RS18615 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS18615 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS18620 IPR011701 Major facilitator superfamily YPA_RS18620 IPR020846 Major facilitator superfamily domain YPA_RS18630 IPR000914 Bacterial extracellular solute-binding protein, family 5 YPA_RS18630 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS18630 IPR023767 Transcriptional regulator SgrR YPA_RS18630 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain YPA_RS18640 IPR005948 Thiamine ABC transporter periplasmic binding protein YPA_RS18640 IPR005967 Proteobacterial thiamine ABC transporter, periplasmic binding protein YPA_RS18645 IPR000515 MetI-like domain YPA_RS18645 IPR005947 Thiamine ABC transporter, permease protein YPA_RS18650 IPR003439 ABC transporter-like YPA_RS18650 IPR003593 AAA+ ATPase domain YPA_RS18650 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ YPA_RS18650 IPR017871 ABC transporter, conserved site YPA_RS18650 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS18655 IPR032816 YPA_RS18655 YPA_RS18655 IPR032818 YPA_RS18655 YPA_RS18660 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain YPA_RS18660 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain YPA_RS18660 IPR006172 DNA-directed DNA polymerase, family B YPA_RS18660 IPR012337 Ribonuclease H-like domain YPA_RS18660 IPR017964 DNA-directed DNA polymerase, family B, conserved site YPA_RS18660 IPR023211 DNA polymerase, palm domain YPA_RS18665 IPR000330 SNF2-related YPA_RS18665 IPR001650 Helicase, C-terminal YPA_RS18665 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YPA_RS18665 IPR022737 RNA polymerase recycling, bacterial, C-terminal YPA_RS18665 IPR023949 RNA polymerase-associated protein RapA YPA_RS18665 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS18675 IPR009612 ImcF-related YPA_RS18675 IPR010623 Domain of unknown function DUF1215 YPA_RS18675 IPR017731 Type VI secretion system, IcmF YPA_RS18675 IPR025743 ImcF-related, N-terminal domain YPA_RS18675 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS18680 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal YPA_RS18680 IPR017732 Type IV / VI secretion system, DotU YPA_RS18685 IPR010263 Protein of unknown function DUF876 YPA_RS18690 IPR017734 Type VI secretion system, lipoprotein SciN YPA_RS18695 IPR025425 Domain of unknown function DUF4150 YPA_RS18700 IPR021927 Protein of unknown function DUF3540 YPA_RS18705 IPR001646 Pentapeptide repeat YPA_RS18705 IPR012334 Pectin lyase fold YPA_RS18710 IPR001646 Pentapeptide repeat YPA_RS18710 IPR012334 Pectin lyase fold YPA_RS18710 IPR018683 Domain of unknown function DUF2169 YPA_RS18715 IPR018683 Domain of unknown function DUF2169 YPA_RS18720 IPR006531 Gp5 N-terminal YPA_RS18720 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPA_RS18720 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPA_RS18725 IPR001270 ClpA/B family YPA_RS18725 IPR003593 AAA+ ATPase domain YPA_RS18725 IPR003959 ATPase, AAA-type, core YPA_RS18725 IPR004176 Clp, N-terminal YPA_RS18725 IPR017729 Type VI secretion system, ATPase ClpV1 YPA_RS18725 IPR019489 Clp ATPase, C-terminal YPA_RS18725 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS18730 IPR010732 Protein of unknown function DUF1305 YPA_RS18735 IPR010272 Type VI secretion system, VCA0110 YPA_RS18740 IPR007048 GpW/Gp25/anti-adapter protein IraD YPA_RS18745 IPR008514 Type VI secretion system effector, Hcp YPA_RS18750 IPR010269 Protein of unknown function DUF877 YPA_RS18755 IPR001584 Integrase, catalytic core YPA_RS18755 IPR006120 Resolvase, HTH domain YPA_RS18755 IPR009057 Homeodomain-like YPA_RS18755 IPR012337 Ribonuclease H-like domain YPA_RS18760 IPR001270 ClpA/B family YPA_RS18760 IPR002611 IstB-like ATP-binding protein YPA_RS18760 IPR003593 AAA+ ATPase domain YPA_RS18760 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS18760 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS18765 IPR001584 Integrase, catalytic core YPA_RS18765 IPR012337 Ribonuclease H-like domain YPA_RS18765 IPR025948 HTH-like domain YPA_RS18770 IPR002514 Transposase IS3/IS911family YPA_RS18770 IPR009057 Homeodomain-like YPA_RS18810 IPR002695 AICARFT/IMPCHase bienzyme YPA_RS18810 IPR011607 Methylglyoxal synthase-like domain YPA_RS18810 IPR016193 Cytidine deaminase-like YPA_RS18810 IPR024051 AICAR transformylase domain YPA_RS18815 IPR000115 Phosphoribosylglycinamide synthetase YPA_RS18815 IPR011054 Rudiment single hybrid motif YPA_RS18815 IPR013815 ATP-grasp fold, subdomain 1 YPA_RS18815 IPR013816 ATP-grasp fold, subdomain 2 YPA_RS18815 IPR016185 Pre-ATP-grasp domain YPA_RS18815 IPR020559 Phosphoribosylglycinamide synthetase, conserved site YPA_RS18815 IPR020560 Phosphoribosylglycinamide synthetase, C-domain YPA_RS18815 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain YPA_RS18815 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal YPA_RS18820 IPR010858 Protein of unknown function DUF1481 YPA_RS18820 IPR016500 Uncharacterised conserved protein UCP006993 YPA_RS18825 IPR000119 Histone-like bacterial DNA-binding protein YPA_RS18825 IPR010992 Integration host factor (IHF)-like DNA-binding domain YPA_RS18825 IPR020816 Histone-like DNA-binding protein, conserved site YPA_RS18830 IPR007338 Protein of unknown function DUF416 YPA_RS18830 IPR023381 YP001051499.1-like domain YPA_RS18835 IPR007581 Endonuclease V YPA_RS18840 IPR000257 Uroporphyrinogen decarboxylase (URO-D) YPA_RS18840 IPR006361 Uroporphyrinogen decarboxylase HemE YPA_RS18850 IPR000086 NUDIX hydrolase domain YPA_RS18850 IPR015376 Zinc ribbon, NADH pyrophosphatase YPA_RS18850 IPR015797 NUDIX hydrolase domain-like YPA_RS18850 IPR020084 NUDIX hydrolase, conserved site YPA_RS18850 IPR022925 NADH pyrophosphatase NudC YPA_RS18855 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ YPA_RS18855 IPR023785 Regulator of RNA polymerase sigma(70) subunit, Rsd YPA_RS18865 IPR002817 Thiamine biosynthesis protein ThiC YPA_RS18865 IPR025747 ThiC-associated domain YPA_RS18870 IPR003733 Thiamine phosphate synthase YPA_RS18870 IPR013785 Aldolase-type TIM barrel YPA_RS18870 IPR022998 Thiamin phosphate synthase superfamily YPA_RS18875 IPR000594 UBA/THIF-type NAD/FAD binding fold YPA_RS18875 IPR016040 NAD(P)-binding domain YPA_RS18880 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 YPA_RS18880 IPR010035 ThiS, thiamine-biosynthesis YPA_RS18880 IPR012675 Beta-grasp domain YPA_RS18880 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp YPA_RS18885 IPR008867 Thiazole biosynthesis YPA_RS18885 IPR013785 Aldolase-type TIM barrel YPA_RS18890 IPR007197 Radical SAM YPA_RS18890 IPR010722 Biotin and thiamin synthesis-associated domain YPA_RS18890 IPR012726 Thiazole biosynthesis ThiH YPA_RS18890 IPR013785 Aldolase-type TIM barrel YPA_RS18905 IPR002686 Transposase IS200-like YPA_RS18910 IPR000722 RNA polymerase, alpha subunit YPA_RS18910 IPR006592 RNA polymerase, N-terminal YPA_RS18910 IPR007066 RNA polymerase Rpb1, domain 3 YPA_RS18910 IPR007080 RNA polymerase Rpb1, domain 1 YPA_RS18910 IPR007081 RNA polymerase Rpb1, domain 5 YPA_RS18910 IPR007083 RNA polymerase Rpb1, domain 4 YPA_RS18910 IPR012754 DNA-directed RNA polymerase, subunit beta-prime YPA_RS18915 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 YPA_RS18915 IPR007121 RNA polymerase, beta subunit, conserved site YPA_RS18915 IPR007641 RNA polymerase Rpb2, domain 7 YPA_RS18915 IPR007642 RNA polymerase Rpb2, domain 2 YPA_RS18915 IPR007644 RNA polymerase, beta subunit, protrusion YPA_RS18915 IPR007645 RNA polymerase Rpb2, domain 3 YPA_RS18915 IPR010243 DNA-directed RNA polymerase, beta subunit YPA_RS18915 IPR014724 RNA polymerase Rpb2, OB-fold YPA_RS18915 IPR015712 DNA-directed RNA polymerase, subunit 2 YPA_RS18915 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain YPA_RS18920 IPR000206 Ribosomal protein L7/L12 YPA_RS18920 IPR008932 Ribosomal protein L7/L12, oligomerisation YPA_RS18920 IPR013823 Ribosomal protein L7/L12, C-terminal YPA_RS18920 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like YPA_RS18925 IPR001790 Ribosomal protein L10/acidic P0 YPA_RS18925 IPR002363 Ribosomal protein L10, eubacterial, conserved site YPA_RS18925 IPR022973 Ribosomal protein L10 YPA_RS18930 IPR002143 Ribosomal protein L1 YPA_RS18930 IPR005878 Ribosomal protein L1, bacterial-type YPA_RS18930 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich YPA_RS18930 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich YPA_RS18930 IPR023673 Ribosomal protein L1, conserved site YPA_RS18930 IPR023674 Ribosomal protein L1-like YPA_RS18930 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein YPA_RS18935 IPR000911 Ribosomal protein L11/L12 YPA_RS18935 IPR006519 Ribosomal protein L11, bacterial-type YPA_RS18935 IPR020783 Ribosomal protein L11, C-terminal YPA_RS18935 IPR020784 Ribosomal protein L11, N-terminal YPA_RS18935 IPR020785 Ribosomal protein L11, conserved site YPA_RS18940 IPR001062 Transcription antitermination protein, NusG YPA_RS18940 IPR005824 KOW YPA_RS18940 IPR006645 NusG, N-terminal YPA_RS18940 IPR008991 Translation protein SH3-like domain YPA_RS18940 IPR014722 Ribosomal protein L2 domain 2 YPA_RS18940 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site YPA_RS18945 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit YPA_RS18945 IPR005807 SecE subunit of protein translocation complex YPA_RS18945 IPR022943 Preprotein translocase subunit SecE YPA_RS18950 IPR000795 Elongation factor, GTP-binding domain YPA_RS18950 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal YPA_RS18950 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 YPA_RS18950 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle YPA_RS18950 IPR005225 Small GTP-binding protein domain YPA_RS18950 IPR009000 Translation protein, beta-barrel domain YPA_RS18950 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal YPA_RS18950 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS18950 IPR031157 YPA_RS18950 YPA_RS18975 IPR001270 ClpA/B family YPA_RS18975 IPR002611 IstB-like ATP-binding protein YPA_RS18975 IPR003593 AAA+ ATPase domain YPA_RS18975 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS18975 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS18980 IPR001584 Integrase, catalytic core YPA_RS18980 IPR006120 Resolvase, HTH domain YPA_RS18980 IPR009057 Homeodomain-like YPA_RS18980 IPR012337 Ribonuclease H-like domain YPA_RS18985 IPR000683 Oxidoreductase, N-terminal YPA_RS18985 IPR016040 NAD(P)-binding domain YPA_RS18990 IPR003313 AraC-type arabinose-binding/dimerisation domain YPA_RS18990 IPR009057 Homeodomain-like YPA_RS18990 IPR018060 DNA binding HTH domain, AraC-type YPA_RS18995 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU YPA_RS18995 IPR023750 RbsD-like domain YPA_RS19000 IPR002139 Ribokinase YPA_RS19000 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YPA_RS19000 IPR011611 Carbohydrate kinase PfkB YPA_RS19000 IPR029056 Ribokinase-like YPA_RS19005 IPR002915 DeoC/FbaB/ lacD aldolase YPA_RS19005 IPR011343 Deoxyribose-phosphate aldolase YPA_RS19005 IPR013785 Aldolase-type TIM barrel YPA_RS19010 IPR005025 NADPH-dependent FMN reductase-like YPA_RS19010 IPR020048 NADPH-dependent FMN reductase, SsuE YPA_RS19010 IPR029039 Flavoprotein-like YPA_RS19015 IPR001638 Extracellular solute-binding protein, family 3 YPA_RS19015 IPR010067 ABC transporter, substrate-binding protein, aliphatic sulphonates YPA_RS19015 IPR015168 SsuA/THI5-like YPA_RS19020 IPR011251 Luciferase-like domain YPA_RS19020 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent YPA_RS19025 IPR000515 MetI-like domain YPA_RS19030 IPR003439 ABC transporter-like YPA_RS19030 IPR003593 AAA+ ATPase domain YPA_RS19030 IPR017871 ABC transporter, conserved site YPA_RS19030 IPR017875 ABC transporter, aliphatic sulphonate import, ATP-binding protein YPA_RS19030 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS19035 IPR007337 RelB antitoxin/Antitoxin DinJ YPA_RS19035 IPR026262 Antitoxin DinJ YPA_RS19040 IPR006043 Xanthine/uracil/vitamin C permease YPA_RS19045 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria YPA_RS19045 IPR006153 Cation/H+ exchanger YPA_RS19045 IPR018422 Cation/H+ exchanger, CPA1 family YPA_RS19055 IPR004960 Bacterial lipid A biosynthesis acyltransferase YPA_RS19055 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase YPA_RS19055 IPR030857 YPA_RS19055 YPA_RS19060 IPR025997 Periplasmic binding protein domain YPA_RS19060 IPR028082 Periplasmic binding protein-like I YPA_RS19065 IPR003439 ABC transporter-like YPA_RS19065 IPR003593 AAA+ ATPase domain YPA_RS19065 IPR017871 ABC transporter, conserved site YPA_RS19065 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS19070 IPR001851 ABC transporter, permease YPA_RS19075 IPR001851 ABC transporter, permease YPA_RS19080 IPR000577 YPA_RS19080 YPA_RS19080 IPR006003 Carbohydrate kinase, FGGY-related YPA_RS19080 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPA_RS19080 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPA_RS19085 IPR001347 Sugar isomerase (SIS) YPA_RS19090 IPR004045 Glutathione S-transferase, N-terminal YPA_RS19090 IPR004046 Glutathione S-transferase, C-terminal YPA_RS19090 IPR010987 Glutathione S-transferase, C-terminal-like YPA_RS19090 IPR012336 Thioredoxin-like fold YPA_RS19095 IPR027372 Phytase-like domain YPA_RS19100 IPR001623 DnaJ domain YPA_RS19110 IPR002686 Transposase IS200-like YPA_RS19115 IPR002059 Cold-shock protein, DNA-binding YPA_RS19115 IPR011129 Cold shock protein YPA_RS19115 IPR012156 Cold shock, CspA YPA_RS19115 IPR012340 Nucleic acid-binding, OB-fold YPA_RS19115 IPR019844 Cold-shock conserved site YPA_RS19120 IPR002059 Cold-shock protein, DNA-binding YPA_RS19120 IPR011129 Cold shock protein YPA_RS19120 IPR012156 Cold shock, CspA YPA_RS19120 IPR012340 Nucleic acid-binding, OB-fold YPA_RS19120 IPR019844 Cold-shock conserved site YPA_RS19130 IPR008816 Glycine zipper 2TM domain YPA_RS19135 IPR001279 Beta-lactamase-like YPA_RS19140 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site YPA_RS19140 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding YPA_RS19140 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YPA_RS19140 IPR013328 Dehydrogenase, multihelical YPA_RS19140 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type YPA_RS19140 IPR016040 NAD(P)-binding domain YPA_RS19140 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain YPA_RS19145 IPR003779 Carboxymuconolactone decarboxylase-like YPA_RS19145 IPR029032 AhpD-like YPA_RS19150 IPR005829 Sugar transporter, conserved site YPA_RS19150 IPR011701 Major facilitator superfamily YPA_RS19150 IPR020846 Major facilitator superfamily domain YPA_RS19155 IPR000524 Transcription regulator HTH, GntR YPA_RS19155 IPR008920 Transcription regulator FadR/GntR, C-terminal YPA_RS19155 IPR011711 GntR, C-terminal YPA_RS19155 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS19160 IPR018958 SMI1/KNR4 like domain YPA_RS19165 IPR002197 DNA binding HTH domain, Fis-type YPA_RS19165 IPR005412 DNA-binding protein Fis YPA_RS19165 IPR009057 Homeodomain-like YPA_RS19170 IPR001269 tRNA-dihydrouridine synthase YPA_RS19170 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 YPA_RS19170 IPR013785 Aldolase-type TIM barrel YPA_RS19170 IPR018517 tRNA-dihydrouridine synthase, conserved site YPA_RS19170 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal YPA_RS19170 IPR032887 YPA_RS19170 YPA_RS19175 IPR004498 Ribosomal protein L11 methyltransferase YPA_RS19175 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPA_RS19180 IPR001734 Sodium/solute symporter YPA_RS19180 IPR011849 Sodium/pantothenate symporter YPA_RS19180 IPR018212 Sodium/solute symporter, conserved site YPA_RS19185 IPR010398 Protein of unknown function DUF997 YPA_RS19190 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase YPA_RS19190 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain YPA_RS19190 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal YPA_RS19190 IPR005482 Biotin carboxylase, C-terminal YPA_RS19190 IPR011054 Rudiment single hybrid motif YPA_RS19190 IPR013815 ATP-grasp fold, subdomain 1 YPA_RS19190 IPR013816 ATP-grasp fold, subdomain 2 YPA_RS19190 IPR016185 Pre-ATP-grasp domain YPA_RS19195 IPR000089 Biotin/lipoyl attachment YPA_RS19195 IPR001249 Acetyl-CoA biotin carboxyl carrier YPA_RS19195 IPR001882 Biotin-binding site YPA_RS19195 IPR011053 Single hybrid motif YPA_RS19200 IPR001874 Dehydroquinase, class II YPA_RS19200 IPR018509 Dehydroquinase, class II, conserved site YPA_RS19205 IPR013130 Ferric reductase transmembrane component-like domain YPA_RS19205 IPR022837 Sulphoxide reductase heme-binding subunit YedZ YPA_RS19210 IPR000572 Oxidoreductase, molybdopterin-binding domain YPA_RS19210 IPR022867 Sulphoxide reductase catalytic subunit YedY YPA_RS19215 IPR002085 Alcohol dehydrogenase superfamily, zinc-type YPA_RS19215 IPR011032 GroES (chaperonin 10)-like YPA_RS19215 IPR013149 Alcohol dehydrogenase, C-terminal YPA_RS19215 IPR013154 Alcohol dehydrogenase GroES-like YPA_RS19215 IPR014188 Acrylyl-CoA reductase AcuI YPA_RS19215 IPR016040 NAD(P)-binding domain YPA_RS19215 IPR020843 Polyketide synthase, enoylreductase YPA_RS19220 IPR000160 GGDEF domain YPA_RS19220 IPR001633 EAL domain YPA_RS19220 IPR029787 Nucleotide cyclase YPA_RS19220 IPR033423 YPA_RS19220 YPA_RS19225 IPR004753 Cell shape determining protein MreB/Mrl YPA_RS19230 IPR007221 Rod shape-determining protein MreC YPA_RS19235 IPR007227 Cell shape-determining protein MreD YPA_RS19235 IPR026034 Cell shape-determining protein MreD, proteobacterial type YPA_RS19240 IPR003697 Maf-like protein YPA_RS19240 IPR029001 Inosine triphosphate pyrophosphatase-like YPA_RS19245 IPR003029 Ribosomal protein S1, RNA-binding domain YPA_RS19245 IPR004659 Ribonuclease E/G YPA_RS19245 IPR012340 Nucleic acid-binding, OB-fold YPA_RS19245 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G YPA_RS19245 IPR022967 RNA-binding domain, S1 YPA_RS19250 IPR011836 Conserved hypothetical protein CHP02099 YPA_RS19250 IPR025263 Domain of unknown function DUF3971 YPA_RS19250 IPR032712 YPA_RS19250 YPA_RS19255 IPR001110 Uncharacterised protein family UPF0012, conserved site YPA_RS19255 IPR003010 Carbon-nitrogen hydrolase YPA_RS19260 IPR002510 TldD/PmbA YPA_RS19260 IPR025502 TldD YPA_RS19265 IPR006530 YD repeat YPA_RS19265 IPR016130 Protein-tyrosine phosphatase, active site YPA_RS19265 IPR022385 Rhs repeat-associated core YPA_RS19265 IPR029021 Protein-tyrosine phosphatase-like YPA_RS19270 IPR000340 Dual specificity phosphatase, catalytic domain YPA_RS19270 IPR006530 YD repeat YPA_RS19270 IPR016130 Protein-tyrosine phosphatase, active site YPA_RS19270 IPR022385 Rhs repeat-associated core YPA_RS19270 IPR029021 Protein-tyrosine phosphatase-like YPA_RS19275 IPR022538 Protein of unknown function DUF2570 YPA_RS19280 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain YPA_RS19285 IPR032126 YPA_RS19285 YPA_RS19290 IPR003284 Salmonella virulence plasmid 65kDa B protein YPA_RS19290 IPR022044 Insecticide toxin TcdB middle/C-terminal YPA_RS19290 IPR022045 Insecticide toxin TcdB middle/N-terminal YPA_RS19305 IPR000847 Transcription regulator HTH, LysR YPA_RS19305 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS19310 IPR000847 Transcription regulator HTH, LysR YPA_RS19310 IPR005119 LysR, substrate-binding YPA_RS19310 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS19315 IPR012451 Protein of unknown function DUF1656 YPA_RS19320 IPR006143 RND efflux pump, membrane fusion protein YPA_RS19320 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA YPA_RS19325 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein YPA_RS19325 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB YPA_RS19330 IPR015590 Aldehyde dehydrogenase domain YPA_RS19330 IPR016160 Aldehyde dehydrogenase, cysteine active site YPA_RS19330 IPR016161 Aldehyde/histidinol dehydrogenase YPA_RS19330 IPR016162 Aldehyde dehydrogenase, N-terminal YPA_RS19330 IPR016163 Aldehyde dehydrogenase, C-terminal YPA_RS19330 IPR029510 Aldehyde dehydrogenase, glutamic acid active site YPA_RS19335 IPR015590 Aldehyde dehydrogenase domain YPA_RS19335 IPR016161 Aldehyde/histidinol dehydrogenase YPA_RS19335 IPR016163 Aldehyde dehydrogenase, C-terminal YPA_RS19340 IPR000026 Guanine-specific ribonuclease N1/T1 YPA_RS19340 IPR001887 Barnase YPA_RS19340 IPR016191 Ribonuclease/ribotoxin YPA_RS19345 IPR000468 Barstar (barnase inhibitor) YPA_RS19350 IPR006839 Ribosome-associated, YjgA YPA_RS19350 IPR023153 PSPTO4464-like domain YPA_RS19355 IPR002510 TldD/PmbA YPA_RS19365 IPR009155 Cytochrome b562 YPA_RS19365 IPR010980 Cytochrome c/b562 YPA_RS19370 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal YPA_RS19370 IPR028625 Regulator of nucleoside diphosphate kinase YPA_RS19370 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain YPA_RS19375 IPR006047 Glycosyl hydrolase, family 13, catalytic domain YPA_RS19375 IPR012769 Trehalose-6-phosphate hydrolase YPA_RS19375 IPR013780 Glycosyl hydrolase, family 13, all-beta YPA_RS19375 IPR013781 Glycoside hydrolase, catalytic domain YPA_RS19375 IPR015902 Glycoside hydrolase, family 13 YPA_RS19375 IPR017853 Glycoside hydrolase, superfamily YPA_RS19375 IPR022567 Domain of unknown function DUF3459 YPA_RS19380 IPR001996 Phosphotransferase system, IIB component, type 1 YPA_RS19380 IPR003352 Phosphotransferase system, EIIC YPA_RS19380 IPR011296 Phosphotransferase system, trehalose-specific IIBC component YPA_RS19380 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site YPA_RS19385 IPR000843 Transcription regulator HTH, LacI YPA_RS19385 IPR010982 Lambda repressor-like, DNA-binding domain YPA_RS19385 IPR012771 Trehalose operon repressor YPA_RS19385 IPR028082 Periplasmic binding protein-like I YPA_RS19390 IPR031948 YPA_RS19390 YPA_RS19395 IPR006056 Enamine/imine deaminase YjgF-like YPA_RS19395 IPR006175 YjgF/Yer057p/UK114 family YPA_RS19395 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like YPA_RS19395 IPR019897 YjgF-like protein, conserved site YPA_RS19400 IPR002801 Aspartate transcarbamylase regulatory subunit YPA_RS19400 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal YPA_RS19400 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal YPA_RS19405 IPR002082 Aspartate carbamoyltransferase YPA_RS19405 IPR006130 Aspartate/ornithine carbamoyltransferase YPA_RS19405 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain YPA_RS19405 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding YPA_RS19410 IPR000032 Phosphocarrier HPr protein-like YPA_RS19410 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site YPA_RS19415 IPR005337 ATPase, P-loop-containing YPA_RS19415 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS19420 IPR002178 PTS EIIA type-2 domain YPA_RS19420 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN YPA_RS19420 IPR016152 Phosphotransferase/anion transporter YPA_RS19430 IPR000394 RNA polymerase sigma factor 54 YPA_RS19430 IPR007046 RNA polymerase sigma factor 54, core-binding YPA_RS19430 IPR007634 RNA polymerase sigma factor 54, DNA-binding YPA_RS19435 IPR003439 ABC transporter-like YPA_RS19435 IPR003593 AAA+ ATPase domain YPA_RS19435 IPR017871 ABC transporter, conserved site YPA_RS19435 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS19435 IPR030921 YPA_RS19435 YPA_RS19435 IPR032823 YPA_RS19435 YPA_RS19440 IPR005653 Organic solvent tolerance-like, N-terminal YPA_RS19440 IPR014340 Lipopolysaccharide assembly, LptA YPA_RS19445 IPR010664 Lipopolysaccharide assembly, LptC-related YPA_RS19445 IPR026265 Lipopolysaccharide export system protein LptC YPA_RS19450 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase YPA_RS19450 IPR023214 HAD-like domain YPA_RS19455 IPR000644 CBS domain YPA_RS19455 IPR001347 Sugar isomerase (SIS) YPA_RS19455 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type YPA_RS19460 IPR004481 Sodium/potassium/calcium exchanger YPA_RS19460 IPR004837 Sodium/calcium exchanger membrane region YPA_RS19465 IPR003439 ABC transporter-like YPA_RS19465 IPR003593 AAA+ ATPase domain YPA_RS19465 IPR017871 ABC transporter, conserved site YPA_RS19465 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS19470 IPR003453 Permease domain YPA_RS19470 IPR030802 YPA_RS19470 YPA_RS19475 IPR003399 Mammalian cell entry-related YPA_RS19475 IPR030970 YPA_RS19475 YPA_RS19480 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC YPA_RS19480 IPR023094 Toluene tolerance protein, alpha-helical YPA_RS19480 IPR032710 YPA_RS19480 YPA_RS19485 IPR002645 STAS domain YPA_RS19490 IPR002634 BolA protein YPA_RS19495 IPR001986 Enolpyruvate transferase domain YPA_RS19495 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YPA_RS19495 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta YPA_RS19500 IPR001478 PDZ domain YPA_RS19500 IPR001940 Peptidase S1C YPA_RS19500 IPR009003 Trypsin-like cysteine/serine peptidase domain YPA_RS19500 IPR011783 Peptidase S1C, DegS YPA_RS19505 IPR002686 Transposase IS200-like YPA_RS19510 IPR001478 PDZ domain YPA_RS19510 IPR001940 Peptidase S1C YPA_RS19510 IPR009003 Trypsin-like cysteine/serine peptidase domain YPA_RS19510 IPR011782 Peptidase S1C, Do YPA_RS19515 IPR009386 Protein of unknown function DUF1043 YPA_RS19520 IPR005654 ATPase, AFG1-like YPA_RS19520 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS19520 IPR030870 YPA_RS19520 YPA_RS19525 IPR005822 Ribosomal protein L13 YPA_RS19525 IPR005823 Ribosomal protein L13, bacterial-type YPA_RS19525 IPR023563 Ribosomal protein L13, conserved site YPA_RS19525 IPR023564 Ribosomal protein L13 domain YPA_RS19530 IPR000754 Ribosomal protein S9 YPA_RS19530 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPA_RS19530 IPR020568 Ribosomal protein S5 domain 2-type fold YPA_RS19530 IPR020574 Ribosomal protein S9, conserved site YPA_RS19530 IPR023035 Ribosomal protein S9, bacterial/plastid YPA_RS19540 IPR004045 Glutathione S-transferase, N-terminal YPA_RS19540 IPR004046 Glutathione S-transferase, C-terminal YPA_RS19540 IPR010987 Glutathione S-transferase, C-terminal-like YPA_RS19540 IPR012336 Thioredoxin-like fold YPA_RS19545 IPR007481 Stringent starvation protein B YPA_RS19555 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 YPA_RS19555 IPR009051 Alpha-helical ferredoxin YPA_RS19555 IPR016040 NAD(P)-binding domain YPA_RS19555 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPA_RS19555 IPR028261 Dihydroprymidine dehydrogenase domain II YPA_RS19560 IPR002489 Glutamate synthase, alpha subunit, C-terminal YPA_RS19560 IPR002932 Glutamate synthase domain YPA_RS19560 IPR006982 Glutamate synthase, central-N YPA_RS19560 IPR013785 Aldolase-type TIM barrel YPA_RS19560 IPR017932 Glutamine amidotransferase type 2 domain YPA_RS19560 IPR029055 Nucleophile aminohydrolases, N-terminal YPA_RS19565 IPR005911 Conserved hypothetical protein CHP01212 YPA_RS19565 IPR006638 Elongator protein 3/MiaB/NifB YPA_RS19565 IPR007197 Radical SAM YPA_RS19565 IPR023404 Radical SAM, alpha/beta horseshoe YPA_RS19565 IPR032432 YPA_RS19565 YPA_RS19575 IPR000014 PAS domain YPA_RS19575 IPR001789 Signal transduction response regulator, receiver domain YPA_RS19575 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPA_RS19575 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPA_RS19575 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPA_RS19575 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain YPA_RS19575 IPR011006 CheY-like superfamily YPA_RS19575 IPR013767 PAS fold YPA_RS19575 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB YPA_RS19575 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain YPA_RS19585 IPR026041 Enhancing lycopene biosynthesis protein 2 YPA_RS19585 IPR029062 Class I glutamine amidotransferase-like YPA_RS19590 IPR001264 Glycosyl transferase, family 51 YPA_RS19590 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase YPA_RS19590 IPR023346 Lysozyme-like domain YPA_RS19595 IPR007055 BON domain YPA_RS19595 IPR014004 Transport-associated and nodulation domain, bacteria YPA_RS19600 IPR001347 Sugar isomerase (SIS) YPA_RS19600 IPR023070 DnaA initiator-associating protein YPA_RS19605 IPR003509 Uncharacterised protein family UPF0102 YPA_RS19605 IPR011335 Restriction endonuclease type II-like YPA_RS19605 IPR011856 tRNA endonuclease-like domain YPA_RS19610 IPR007443 Penicillin-binding protein activator LpoA YPA_RS19610 IPR028082 Periplasmic binding protein-like I YPA_RS19615 IPR000878 Tetrapyrrole methylase YPA_RS19615 IPR008189 rRNA small subunit methyltransferase I YPA_RS19615 IPR014776 Tetrapyrrole methylase, subdomain 2 YPA_RS19615 IPR014777 Tetrapyrrole methylase, subdomain 1 YPA_RS19615 IPR018063 SAM-dependent methyltransferase RsmI, conserved site YPA_RS19620 IPR003829 Pirin, N-terminal domain YPA_RS19620 IPR011051 RmlC-like cupin domain YPA_RS19620 IPR012093 Pirin YPA_RS19620 IPR014710 RmlC-like jelly roll fold YPA_RS19625 IPR000847 Transcription regulator HTH, LysR YPA_RS19625 IPR005119 LysR, substrate-binding YPA_RS19625 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS19630 IPR004045 Glutathione S-transferase, N-terminal YPA_RS19630 IPR010987 Glutathione S-transferase, C-terminal-like YPA_RS19630 IPR012336 Thioredoxin-like fold YPA_RS19630 IPR016639 Glutathione S-transferase (GST) YPA_RS19635 IPR001270 ClpA/B family YPA_RS19635 IPR002611 IstB-like ATP-binding protein YPA_RS19635 IPR003593 AAA+ ATPase domain YPA_RS19635 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS19635 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS19640 IPR001584 Integrase, catalytic core YPA_RS19640 IPR006120 Resolvase, HTH domain YPA_RS19640 IPR009057 Homeodomain-like YPA_RS19640 IPR012337 Ribonuclease H-like domain YPA_RS19645 IPR009057 Homeodomain-like YPA_RS19650 IPR001584 Integrase, catalytic core YPA_RS19650 IPR012337 Ribonuclease H-like domain YPA_RS19650 IPR025948 HTH-like domain YPA_RS19660 IPR010351 Protein of unknown function DUF943 YPA_RS19670 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase YPA_RS19670 IPR006076 FAD dependent oxidoreductase YPA_RS19670 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPA_RS19670 IPR031656 YPA_RS19670 YPA_RS19675 IPR000811 Glycosyl transferase, family 35 YPA_RS19675 IPR011833 Glycogen/starch/alpha-glucan phosphorylase YPA_RS19680 IPR001296 Glycosyl transferase, family 1 YPA_RS19680 IPR011835 Glycogen/starch synthase, ADP-glucose type YPA_RS19680 IPR013534 Starch synthase, catalytic domain YPA_RS19685 IPR005835 Nucleotidyl transferase YPA_RS19685 IPR005836 ADP-glucose pyrophosphorylase, conserved site YPA_RS19685 IPR011004 Trimeric LpxA-like YPA_RS19685 IPR011831 Glucose-1-phosphate adenylyltransferase YPA_RS19685 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial YPA_RS19685 IPR029044 Nucleotide-diphospho-sugar transferases YPA_RS19690 IPR004193 Glycoside hydrolase, family 13, N-terminal YPA_RS19690 IPR006047 Glycosyl hydrolase, family 13, catalytic domain YPA_RS19690 IPR011837 Glycogen debranching enzyme, GlgX type YPA_RS19690 IPR013780 Glycosyl hydrolase, family 13, all-beta YPA_RS19690 IPR013781 Glycoside hydrolase, catalytic domain YPA_RS19690 IPR013783 Immunoglobulin-like fold YPA_RS19690 IPR014756 Immunoglobulin E-set YPA_RS19690 IPR015902 Glycoside hydrolase, family 13 YPA_RS19690 IPR017853 Glycoside hydrolase, superfamily YPA_RS19690 IPR022844 Glycogen debranching enzyme, bacterial YPA_RS19695 IPR004193 Glycoside hydrolase, family 13, N-terminal YPA_RS19695 IPR006047 Glycosyl hydrolase, family 13, catalytic domain YPA_RS19695 IPR006048 Alpha-amylase, C-terminal all beta YPA_RS19695 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB YPA_RS19695 IPR013780 Glycosyl hydrolase, family 13, all-beta YPA_RS19695 IPR013781 Glycoside hydrolase, catalytic domain YPA_RS19695 IPR013783 Immunoglobulin-like fold YPA_RS19695 IPR014756 Immunoglobulin E-set YPA_RS19695 IPR015902 Glycoside hydrolase, family 13 YPA_RS19695 IPR017853 Glycoside hydrolase, superfamily YPA_RS19700 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPA_RS19700 IPR010559 Signal transduction histidine kinase, internal region YPA_RS19700 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region YPA_RS19700 IPR029016 GAF domain-like YPA_RS19705 IPR003344 Bacterial Ig-like, group 1 YPA_RS19705 IPR003535 Intimin/invasin bacterial adhesion mediator protein YPA_RS19705 IPR008964 Invasin/intimin cell-adhesion YPA_RS19705 IPR016186 C-type lectin-like YPA_RS19705 IPR018392 LysM domain YPA_RS19705 IPR024519 Domain of unknown function DUF3442, intimin/invasin YPA_RS19730 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site YPA_RS19730 IPR000534 Semialdehyde dehydrogenase, NAD-binding YPA_RS19730 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type YPA_RS19730 IPR012080 Aspartate-semialdehyde dehydrogenase YPA_RS19730 IPR012280 Semialdehyde dehydrogenase, dimerisation domain YPA_RS19730 IPR016040 NAD(P)-binding domain YPA_RS19735 IPR002771 Multiple antibiotic resistance (MarC)-related YPA_RS19755 IPR006001 Carbohydrate kinase, thermoresistant glucokinase YPA_RS19755 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS19755 IPR031322 YPA_RS19755 YPA_RS19760 IPR003474 Gluconate transporter YPA_RS19765 IPR000843 Transcription regulator HTH, LacI YPA_RS19765 IPR001761 Periplasmic binding protein/LacI sugar binding domain YPA_RS19765 IPR010982 Lambda repressor-like, DNA-binding domain YPA_RS19765 IPR028082 Periplasmic binding protein-like I YPA_RS19770 IPR003829 Pirin, N-terminal domain YPA_RS19770 IPR011051 RmlC-like cupin domain YPA_RS19770 IPR012093 Pirin YPA_RS19770 IPR014710 RmlC-like jelly roll fold YPA_RS19780 IPR001789 Signal transduction response regulator, receiver domain YPA_RS19780 IPR001867 Signal transduction response regulator, C-terminal YPA_RS19780 IPR011006 CheY-like superfamily YPA_RS19780 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS19780 IPR016032 Signal transduction response regulator, C-terminal effector YPA_RS19785 IPR011611 Carbohydrate kinase PfkB YPA_RS19785 IPR029056 Ribokinase-like YPA_RS19790 IPR000771 Ketose-bisphosphate aldolase, class-II YPA_RS19790 IPR013785 Aldolase-type TIM barrel YPA_RS19795 IPR010864 Protein of unknown function DUF1498 YPA_RS19795 IPR011051 RmlC-like cupin domain YPA_RS19800 IPR025997 Periplasmic binding protein domain YPA_RS19800 IPR028082 Periplasmic binding protein-like I YPA_RS19805 IPR001851 ABC transporter, permease YPA_RS19810 IPR003439 ABC transporter-like YPA_RS19810 IPR003593 AAA+ ATPase domain YPA_RS19810 IPR017871 ABC transporter, conserved site YPA_RS19810 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS19815 IPR000014 PAS domain YPA_RS19815 IPR001789 Signal transduction response regulator, receiver domain YPA_RS19815 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPA_RS19815 IPR003660 HAMP linker domain YPA_RS19815 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPA_RS19815 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPA_RS19815 IPR011006 CheY-like superfamily YPA_RS19820 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like YPA_RS19820 IPR023166 HI0933 insert-like domain YPA_RS19820 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPA_RS19825 IPR001204 Phosphate transporter YPA_RS19830 IPR002686 Transposase IS200-like YPA_RS19835 IPR019598 Universal stress protein B YPA_RS19840 IPR006015 Universal stress protein A YPA_RS19840 IPR006016 UspA YPA_RS19840 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPA_RS19845 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase YPA_RS19845 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal YPA_RS19845 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain YPA_RS19845 IPR014362 Glutamate dehydrogenase YPA_RS19845 IPR016040 NAD(P)-binding domain YPA_RS19850 IPR006026 Peptidase, metallopeptidase YPA_RS19850 IPR011049 Serralysin-like metalloprotease, C-terminal YPA_RS19850 IPR013858 Peptidase M10 serralysin C-terminal domain YPA_RS19850 IPR016294 Peptidase M10B YPA_RS19850 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass YPA_RS19850 IPR024079 Metallopeptidase, catalytic domain YPA_RS19855 IPR007536 Ribosomal RNA small subunit methyltransferase J YPA_RS19855 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPA_RS19860 IPR001567 Peptidase M3A/M3B YPA_RS19860 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 YPA_RS19860 IPR024079 Metallopeptidase, catalytic domain YPA_RS19860 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal YPA_RS19865 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPA_RS19865 IPR007473 Ribosomal RNA large subunit methyltransferase J YPA_RS19865 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPA_RS19870 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YPA_RS19870 IPR006322 Glutathione reductase, eukaryote/bacterial YPA_RS19870 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site YPA_RS19870 IPR016156 FAD/NAD-linked reductase, dimerisation domain YPA_RS19870 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPA_RS19875 IPR008599 Putative sugar diacid recognition YPA_RS19875 IPR009057 Homeodomain-like YPA_RS19875 IPR025736 PucR C-terminal helix-turn-helix domain YPA_RS19880 IPR003474 Gluconate transporter YPA_RS19885 IPR004381 Glycerate kinase YPA_RS19885 IPR018193 Glycerate kinase, flavodoxin-like domain YPA_RS19890 IPR010351 Protein of unknown function DUF943 YPA_RS19895 IPR010351 Protein of unknown function DUF943 YPA_RS19900 IPR017483 Conserved hypothetical protein CHP03034 YPA_RS19905 IPR004899 Pertactin, central region YPA_RS19905 IPR005546 Autotransporter beta-domain YPA_RS19905 IPR006315 Outer membrane autotransporter barrel YPA_RS19905 IPR011050 Pectin lyase fold/virulence factor YPA_RS19905 IPR012332 P22 tailspike C-terminal domain-like YPA_RS19910 IPR005274 Inner membrane protein YhjD YPA_RS19910 IPR017039 Virulence factor BrkB YPA_RS19915 IPR003763 CDP-diacylglycerol pyrophosphatase YPA_RS19915 IPR011146 HIT-like domain YPA_RS19920 IPR007844 AsmA YPA_RS19925 IPR001633 EAL domain YPA_RS19930 IPR004370 4-oxalocrotonate tautomerase YPA_RS19930 IPR014347 Tautomerase/MIF superfamily YPA_RS19930 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type YPA_RS19935 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YPA_RS19935 IPR011611 Carbohydrate kinase PfkB YPA_RS19935 IPR029056 Ribokinase-like YPA_RS19940 IPR007863 Peptidase M16, C-terminal domain YPA_RS19940 IPR011237 Peptidase M16 domain YPA_RS19940 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like YPA_RS19940 IPR011765 Peptidase M16, N-terminal YPA_RS19945 IPR001991 Sodium:dicarboxylate symporter YPA_RS19945 IPR018107 Sodium:dicarboxylate symporter, conserved site YPA_RS19945 IPR023954 C4-dicarboxylate transport protein YPA_RS19950 IPR000421 Coagulation factor 5/8 C-terminal type domain YPA_RS19950 IPR008979 Galactose-binding domain-like YPA_RS19955 IPR010702 Periplasmic pectate lyase YPA_RS19960 IPR009331 Oligogalacturonate-specific porin YPA_RS19965 IPR000160 GGDEF domain YPA_RS19965 IPR001633 EAL domain YPA_RS19965 IPR003660 HAMP linker domain YPA_RS19965 IPR029787 Nucleotide cyclase YPA_RS19965 IPR033419 YPA_RS19965 YPA_RS19970 IPR002037 Glycoside hydrolase, family 8 YPA_RS19970 IPR008928 Six-hairpin glycosidase-like YPA_RS19970 IPR012341 Six-hairpin glycosidase YPA_RS19975 IPR003439 ABC transporter-like YPA_RS19975 IPR003593 AAA+ ATPase domain YPA_RS19975 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YPA_RS19975 IPR017871 ABC transporter, conserved site YPA_RS19975 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS19980 IPR003439 ABC transporter-like YPA_RS19980 IPR003593 AAA+ ATPase domain YPA_RS19980 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YPA_RS19980 IPR017871 ABC transporter, conserved site YPA_RS19980 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS19985 IPR000515 MetI-like domain YPA_RS19985 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YPA_RS19990 IPR000515 MetI-like domain YPA_RS19995 IPR000914 Bacterial extracellular solute-binding protein, family 5 YPA_RS19995 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site YPA_RS19995 IPR030678 YPA_RS19995 YPA_RS20005 IPR005565 Haemolysin activator HlyB YPA_RS20005 IPR013686 Polypeptide-transport-associated, ShlB-type YPA_RS20005 IPR027282 Two partner secretion pathway transporter YPA_RS20010 IPR008638 Filamentous haemagglutinin, N-terminal YPA_RS20010 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPA_RS20010 IPR011050 Pectin lyase fold/virulence factor YPA_RS20010 IPR012334 Pectin lyase fold YPA_RS20015 IPR002686 Transposase IS200-like YPA_RS20025 IPR000849 Sugar phosphate transporter YPA_RS20025 IPR011701 Major facilitator superfamily YPA_RS20025 IPR020846 Major facilitator superfamily domain YPA_RS20030 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPA_RS20030 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain YPA_RS20035 IPR001270 ClpA/B family YPA_RS20035 IPR002611 IstB-like ATP-binding protein YPA_RS20035 IPR003593 AAA+ ATPase domain YPA_RS20035 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS20035 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS20040 IPR001584 Integrase, catalytic core YPA_RS20040 IPR006120 Resolvase, HTH domain YPA_RS20040 IPR009057 Homeodomain-like YPA_RS20040 IPR012337 Ribonuclease H-like domain YPA_RS20045 IPR003439 ABC transporter-like YPA_RS20045 IPR003593 AAA+ ATPase domain YPA_RS20045 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS20050 IPR003812 Fido domain YPA_RS20050 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS20050 IPR025230 Domain of unknown function DUF4172 YPA_RS20055 IPR001387 Cro/C1-type helix-turn-helix domain YPA_RS20055 IPR004821 Cytidyltransferase-like domain YPA_RS20055 IPR006417 Nicotinamide-nucleotide adenylyltransferase YPA_RS20055 IPR010982 Lambda repressor-like, DNA-binding domain YPA_RS20055 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPA_RS20055 IPR016429 Bifunctional transcriptional regulator NadR YPA_RS20055 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS20060 IPR003593 AAA+ ATPase domain YPA_RS20060 IPR004504 DNA repair protein RadA YPA_RS20060 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPA_RS20060 IPR020568 Ribosomal protein S5 domain 2-type fold YPA_RS20060 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS20065 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like YPA_RS20065 IPR023190 Phosphoserine phosphatase, domain 2 YPA_RS20065 IPR023214 HAD-like domain YPA_RS20070 IPR019305 Uncharacterised protein family Smp YPA_RS20075 IPR000845 Nucleoside phosphorylase domain YPA_RS20075 IPR004402 Purine nucleoside phosphorylase DeoD-type YPA_RS20075 IPR018016 Nucleoside phosphorylase, conserved site YPA_RS20075 IPR018017 Nucleoside phosphorylase YPA_RS20080 IPR006124 Metalloenzyme YPA_RS20080 IPR010045 Phosphopentomutase YPA_RS20080 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha YPA_RS20080 IPR017850 Alkaline-phosphatase-like, core domain YPA_RS20080 IPR024052 Phosphopentomutase DeoB cap domain YPA_RS20085 IPR000053 Pyrimidine-nucleoside phosphorylase YPA_RS20085 IPR000312 Glycosyl transferase, family 3 YPA_RS20085 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal YPA_RS20090 IPR000053 Pyrimidine-nucleoside phosphorylase YPA_RS20090 IPR000312 Glycosyl transferase, family 3 YPA_RS20090 IPR017459 Glycosyl transferase family 3, N-terminal domain YPA_RS20090 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site YPA_RS20095 IPR002915 DeoC/FbaB/ lacD aldolase YPA_RS20095 IPR011343 Deoxyribose-phosphate aldolase YPA_RS20095 IPR013785 Aldolase-type TIM barrel YPA_RS20095 IPR023649 Deoxyribose-phosphate aldolase type II YPA_RS20100 IPR002668 Concentrative nucleoside transporter N-terminal domain YPA_RS20100 IPR008276 Concentrative nucleoside transporter YPA_RS20100 IPR011642 Nucleoside recognition Gate YPA_RS20100 IPR011657 Concentrative nucleoside transporter C-terminal domain YPA_RS20100 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial YPA_RS20105 IPR001130 TatD family YPA_RS20105 IPR018228 Deoxyribonuclease, TatD-related, conserved site YPA_RS20105 IPR032466 YPA_RS20105 YPA_RS20110 IPR002641 Patatin/Phospholipase A2-related YPA_RS20110 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase YPA_RS20115 IPR009760 Protein of unknown function DUF1328 YPA_RS20120 IPR007055 BON domain YPA_RS20120 IPR014004 Transport-associated and nodulation domain, bacteria YPA_RS20125 IPR000795 Elongation factor, GTP-binding domain YPA_RS20125 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 YPA_RS20125 IPR004548 Peptide chain release factor 3 YPA_RS20125 IPR005225 Small GTP-binding protein domain YPA_RS20125 IPR009000 Translation protein, beta-barrel domain YPA_RS20125 IPR009022 Elongation factor G, III-V domain YPA_RS20125 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS20125 IPR031157 YPA_RS20125 YPA_RS20125 IPR032090 YPA_RS20125 YPA_RS20130 IPR000182 GNAT domain YPA_RS20130 IPR006464 Ribosomal-protein-alanine acetyltransferase YPA_RS20130 IPR016181 Acyl-CoA N-acyltransferase YPA_RS20135 IPR004615 DNA polymerase III, psi subunit YPA_RS20140 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPA_RS20140 IPR007848 Methyltransferase small domain YPA_RS20140 IPR013675 Methyltransferase small, N-terminal YPA_RS20140 IPR023543 rRNA small subunit methyltransferase C YPA_RS20140 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPA_RS20150 IPR009885 Protein of unknown function DUF1435 YPA_RS20155 IPR000160 GGDEF domain YPA_RS20155 IPR029787 Nucleotide cyclase YPA_RS20160 IPR000070 Pectinesterase, catalytic YPA_RS20160 IPR011050 Pectin lyase fold/virulence factor YPA_RS20160 IPR012334 Pectin lyase fold YPA_RS20180 IPR001036 Acriflavin resistance protein YPA_RS20180 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPA_RS20185 IPR003997 RTX secretion protein D, Gram-negative bacteria YPA_RS20185 IPR006143 RND efflux pump, membrane fusion protein YPA_RS20185 IPR032317 YPA_RS20185 YPA_RS20190 IPR010445 Protein of unknown function DUF1049 YPA_RS20200 IPR007016 O-antigen ligase-related YPA_RS20205 IPR002201 Glycosyl transferase, family 9 YPA_RS20205 IPR011916 Lipopolysaccharide heptosyltransferase III, putative YPA_RS20210 IPR000577 YPA_RS20210 YPA_RS20210 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPA_RS20210 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPA_RS20225 IPR003439 ABC transporter-like YPA_RS20225 IPR003593 AAA+ ATPase domain YPA_RS20225 IPR017871 ABC transporter, conserved site YPA_RS20225 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS20225 IPR030281 YPA_RS20225 YPA_RS20230 IPR001851 ABC transporter, permease YPA_RS20235 IPR001851 ABC transporter, permease YPA_RS20240 IPR025997 Periplasmic binding protein domain YPA_RS20240 IPR028082 Periplasmic binding protein-like I YPA_RS20240 IPR030159 YPA_RS20240 YPA_RS20245 IPR002915 DeoC/FbaB/ lacD aldolase YPA_RS20245 IPR013785 Aldolase-type TIM barrel YPA_RS20250 IPR007138 Antibiotic biosynthesis monooxygenase-like domain YPA_RS20250 IPR011008 Dimeric alpha-beta barrel YPA_RS20255 IPR019637 Protein of unknown function DUF2501 YPA_RS20260 IPR000032 Phosphocarrier HPr protein-like YPA_RS20260 IPR000121 PEP-utilising enzyme, C-terminal YPA_RS20260 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site YPA_RS20260 IPR002178 PTS EIIA type-2 domain YPA_RS20260 IPR006318 Phosphoenolpyruvate-utilising enzyme YPA_RS20260 IPR008279 PEP-utilising enzyme, mobile domain YPA_RS20260 IPR008731 Phosphotransferase system, enzyme I N-terminal YPA_RS20260 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain YPA_RS20260 IPR016152 Phosphotransferase/anion transporter YPA_RS20260 IPR018274 PEP-utilising enzyme, active site YPA_RS20260 IPR023151 PEP-utilising enzyme, conserved site YPA_RS20265 IPR003352 Phosphotransferase system, EIIC YPA_RS20265 IPR006327 Phosphotransferase system, fructose IIC component YPA_RS20270 IPR003353 Phosphotransferase system, fructose-specific IIB subunit YPA_RS20270 IPR003501 Phosphotransferase system, EIIB component, type 2/3 YPA_RS20275 IPR003353 Phosphotransferase system, fructose-specific IIB subunit YPA_RS20275 IPR003501 Phosphotransferase system, EIIB component, type 2/3 YPA_RS20280 IPR009057 Homeodomain-like YPA_RS20280 IPR018060 DNA binding HTH domain, AraC-type YPA_RS20280 IPR018062 HTH domain AraC-type, conserved site YPA_RS20280 IPR020449 Transcription regulator HTH, AraC- type YPA_RS20285 IPR023802 Colicin/pyocin immunity protein domain YPA_RS20290 IPR010295 Protein of unknown function DUF898 YPA_RS20295 IPR001915 Peptidase M48 YPA_RS20305 IPR014544 Uncharacterised conserved protein UCP028408 YPA_RS20305 IPR024534 Domain of unknown function DUF2220 YPA_RS20305 IPR024537 Domain of unknown function DUF3322 YPA_RS20310 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS20335 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPA_RS20340 IPR002941 DNA methylase N-4/N-6 YPA_RS20340 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPA_RS20345 IPR002514 Transposase IS3/IS911family YPA_RS20345 IPR009057 Homeodomain-like YPA_RS20355 IPR019292 5-methylcytosine restriction system component YPA_RS20360 IPR003593 AAA+ ATPase domain YPA_RS20360 IPR011704 ATPase, dynein-related, AAA domain YPA_RS20360 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS20365 IPR001584 Integrase, catalytic core YPA_RS20365 IPR006120 Resolvase, HTH domain YPA_RS20365 IPR009057 Homeodomain-like YPA_RS20365 IPR012337 Ribonuclease H-like domain YPA_RS20370 IPR001270 ClpA/B family YPA_RS20370 IPR002611 IstB-like ATP-binding protein YPA_RS20370 IPR003593 AAA+ ATPase domain YPA_RS20370 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS20370 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS20380 IPR010854 Domain of unknown function DUF1471 YPA_RS20380 IPR025543 Dodecin-like YPA_RS20385 IPR006089 Acyl-CoA dehydrogenase, conserved site YPA_RS20385 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain YPA_RS20385 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal YPA_RS20385 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain YPA_RS20390 IPR001537 tRNA/rRNA methyltransferase, SpoU type YPA_RS20390 IPR004441 RNA methyltransferase TrmH family YPA_RS20390 IPR013123 RNA 2-O ribose methyltransferase, substrate binding YPA_RS20390 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB YPA_RS20390 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPA_RS20390 IPR029028 Alpha/beta knot methyltransferases YPA_RS20390 IPR029064 50S ribosomal protein L30e-like YPA_RS20395 IPR003029 Ribosomal protein S1, RNA-binding domain YPA_RS20395 IPR004476 Ribonuclease II/ribonuclease R YPA_RS20395 IPR011129 Cold shock protein YPA_RS20395 IPR011805 Ribonuclease R YPA_RS20395 IPR012340 Nucleic acid-binding, OB-fold YPA_RS20395 IPR013223 Ribonuclease B, N-terminal OB domain YPA_RS20395 IPR013668 Ribonuclease R winged-helix domain YPA_RS20395 IPR022967 RNA-binding domain, S1 YPA_RS20400 IPR000944 Transcription regulator Rrf2-like YPA_RS20400 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS20400 IPR023761 Transcriptional repressor HTH, NsrR YPA_RS20400 IPR030489 YPA_RS20400 YPA_RS20405 IPR001114 Adenylosuccinate synthetase YPA_RS20405 IPR018220 Adenylosuccinate synthase, active site YPA_RS20405 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS20405 IPR033128 YPA_RS20405 YPA_RS20410 IPR019201 Protein of unknown function DUF2065 YPA_RS20415 IPR001107 Band 7 protein YPA_RS20415 IPR001972 Stomatin family YPA_RS20415 IPR010200 HflC YPA_RS20415 IPR029060 PIN domain-like YPA_RS20420 IPR001107 Band 7 protein YPA_RS20420 IPR001972 Stomatin family YPA_RS20420 IPR010201 HflK YPA_RS20420 IPR020980 Menbrane protein HflK, N-terminal YPA_RS20425 IPR006073 GTP binding domain YPA_RS20425 IPR009022 Elongation factor G, III-V domain YPA_RS20425 IPR016496 GTPase HflX YPA_RS20425 IPR025121 GTPase HflX N-terminal domain YPA_RS20425 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS20425 IPR032305 YPA_RS20425 YPA_RS20430 IPR005001 Host factor Hfq YPA_RS20430 IPR010920 Like-Sm (LSM) domain YPA_RS20435 IPR018022 tRNA delta(2)-isopentenylpyrophosphate transferase YPA_RS20435 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS20440 IPR002099 DNA mismatch repair protein family YPA_RS20440 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPA_RS20440 IPR013507 DNA mismatch repair protein, C-terminal YPA_RS20440 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPA_RS20440 IPR014762 DNA mismatch repair, conserved site YPA_RS20440 IPR014790 MutL, C-terminal, dimerisation YPA_RS20440 IPR020568 Ribosomal protein S5 domain 2-type fold YPA_RS20440 IPR020667 DNA mismatch repair protein, MutL YPA_RS20445 IPR002508 Cell wall hydrolase/autolysin, catalytic YPA_RS20445 IPR018392 LysM domain YPA_RS20445 IPR021731 AMIN domain YPA_RS20450 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE YPA_RS20450 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS20455 IPR000631 YjeF C-terminal domain YPA_RS20455 IPR004443 YjeF N-terminal domain YPA_RS20455 IPR029056 Ribokinase-like YPA_RS20455 IPR030677 YPA_RS20455 YPA_RS20460 IPR004453 Epoxyqueuosine reductase QueG YPA_RS20460 IPR009051 Alpha-helical ferredoxin YPA_RS20460 IPR013542 Domain of unknown function DUF1730 YPA_RS20460 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPA_RS20475 IPR012337 Ribonuclease H-like domain YPA_RS20475 IPR013520 Exonuclease, RNase T/DNA polymerase III YPA_RS20475 IPR022894 Oligoribonuclease YPA_RS20485 IPR004881 Ribosome biogenesis GTPase RsgA, putative YPA_RS20485 IPR010914 EngC GTPase YPA_RS20485 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS20490 IPR003817 Phosphatidylserine decarboxylase-related YPA_RS20490 IPR033177 YPA_RS20490 YPA_RS20490 IPR033178 YPA_RS20490 YPA_RS20495 IPR006685 Mechanosensitive ion channel MscS YPA_RS20495 IPR006686 Mechanosensitive ion channel MscS, conserved site YPA_RS20495 IPR010920 Like-Sm (LSM) domain YPA_RS20495 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 YPA_RS20495 IPR011066 Mechanosensitive ion channel MscS, C-terminal YPA_RS20495 IPR024393 Mechanosensitive ion channel MscS, porin domain YPA_RS20495 IPR025692 Mechanosensitive ion channel inner membrane domain 1 YPA_RS20500 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) YPA_RS20500 IPR004525 Elongation factor P--(R)-beta-lysine ligase YPA_RS20500 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal YPA_RS20500 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like YPA_RS20510 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site YPA_RS20510 IPR003953 FAD binding domain YPA_RS20510 IPR005884 Fumarate reductase, flavoprotein subunit YPA_RS20510 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit YPA_RS20510 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal YPA_RS20510 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPA_RS20510 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain YPA_RS20510 IPR030664 YPA_RS20510 YPA_RS20515 IPR001041 2Fe-2S ferredoxin-type domain YPA_RS20515 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein YPA_RS20515 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site YPA_RS20515 IPR009051 Alpha-helical ferredoxin YPA_RS20515 IPR012675 Beta-grasp domain YPA_RS20515 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPA_RS20515 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPA_RS20515 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal YPA_RS20520 IPR003510 Fumarate reductase, subunit C YPA_RS20525 IPR003418 Fumarate reductase, D subunit YPA_RS20530 IPR000390 Small multidrug resistance protein family YPA_RS20535 IPR001059 Translation elongation factor P/YeiP, central YPA_RS20535 IPR008991 Translation protein SH3-like domain YPA_RS20535 IPR011768 Translation elongation factor P YPA_RS20535 IPR012340 Nucleic acid-binding, OB-fold YPA_RS20535 IPR013185 Translation elongation factor, KOW-like YPA_RS20535 IPR013852 Translation elongation factor P/YeiP, conserved site YPA_RS20535 IPR014722 Ribosomal protein L2 domain 2 YPA_RS20535 IPR015365 Elongation factor P, C-terminal YPA_RS20535 IPR020599 Translation elongation factor P/YeiP YPA_RS20540 IPR003739 Lysine-2,3-aminomutase family YPA_RS20540 IPR007197 Radical SAM YPA_RS20540 IPR013785 Aldolase-type TIM barrel YPA_RS20540 IPR022462 Lysine-2,3-aminomutase-like YPA_RS20545 IPR025294 Protein of unknown function DUF4156 YPA_RS20550 IPR001844 Chaperonin Cpn60 YPA_RS20550 IPR002423 Chaperonin Cpn60/TCP-1 YPA_RS20550 IPR018370 Chaperonin Cpn60, conserved site YPA_RS20550 IPR027409 GroEL-like apical domain YPA_RS20550 IPR027413 GroEL-like equatorial domain YPA_RS20555 IPR011032 GroES (chaperonin 10)-like YPA_RS20555 IPR018369 Chaperonin Cpn10, conserved site YPA_RS20555 IPR020818 Chaperonin Cpn10 YPA_RS20560 IPR007313 FxsA cytoplasmic membrane protein YPA_RS20565 IPR000362 Fumarate lyase family YPA_RS20565 IPR004708 Aspartate ammonia-lyase YPA_RS20565 IPR008948 L-Aspartase-like YPA_RS20565 IPR018951 Fumarase C, C-terminal YPA_RS20565 IPR020557 Fumarate lyase, conserved site YPA_RS20565 IPR022761 Fumarate lyase, N-terminal YPA_RS20565 IPR024083 Fumarase/histidase, N-terminal YPA_RS20570 IPR004668 Anaerobic c4-dicarboxylate membrane transporter YPA_RS20575 IPR004323 Divalent ion tolerance protein, CutA YPA_RS20575 IPR011322 Nitrogen regulatory PII-like, alpha/beta YPA_RS20580 IPR003834 Cytochrome c assembly protein, transmembrane domain YPA_RS20580 IPR012336 Thioredoxin-like fold YPA_RS20580 IPR017937 Thioredoxin, conserved site YPA_RS20580 IPR022910 Thiol:disulphide interchange protein DsbD YPA_RS20580 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain YPA_RS20585 IPR006478 Formate dehydrogenase, alpha subunit YPA_RS20585 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site YPA_RS20585 IPR006656 Molybdopterin oxidoreductase YPA_RS20585 IPR006657 Molydopterin dinucleotide-binding domain YPA_RS20585 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain YPA_RS20585 IPR009010 Aspartate decarboxylase-like domain YPA_RS20585 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site YPA_RS20590 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPA_RS20590 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPA_RS20595 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 YPA_RS20595 IPR016040 NAD(P)-binding domain YPA_RS20595 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPA_RS20595 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPA_RS20595 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPA_RS20595 IPR028261 Dihydroprymidine dehydrogenase domain II YPA_RS20600 IPR001647 DNA-binding HTH domain, TetR-type YPA_RS20600 IPR009057 Homeodomain-like YPA_RS20600 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal YPA_RS20600 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal YPA_RS20610 IPR004954 Peptidase M60, viral enhancin protein YPA_RS20610 IPR031161 YPA_RS20610 YPA_RS20620 IPR008992 Enterotoxin YPA_RS20630 IPR004673 L-rhamnose-proton symport, RhaT YPA_RS20635 IPR003313 AraC-type arabinose-binding/dimerisation domain YPA_RS20635 IPR009057 Homeodomain-like YPA_RS20635 IPR011051 RmlC-like cupin domain YPA_RS20635 IPR018060 DNA binding HTH domain, AraC-type YPA_RS20635 IPR018062 HTH domain AraC-type, conserved site YPA_RS20635 IPR020449 Transcription regulator HTH, AraC- type YPA_RS20635 IPR023699 Transcription activator HTH, RhaR YPA_RS20640 IPR003313 AraC-type arabinose-binding/dimerisation domain YPA_RS20640 IPR009057 Homeodomain-like YPA_RS20640 IPR014710 RmlC-like jelly roll fold YPA_RS20640 IPR018060 DNA binding HTH domain, AraC-type YPA_RS20640 IPR020449 Transcription regulator HTH, AraC- type YPA_RS20640 IPR023609 Transcription regulator HTH, RhaS YPA_RS20655 IPR000577 YPA_RS20655 YPA_RS20655 IPR013449 Rhamnulokinase YPA_RS20655 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPA_RS20655 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPA_RS20660 IPR009308 Rhamnose isomerase YPA_RS20660 IPR013022 Xylose isomerase-like, TIM barrel domain YPA_RS20665 IPR001303 Class II aldolase/adducin N-terminal YPA_RS20665 IPR013447 Rhamnulose-1-phosphate aldolase YPA_RS20670 IPR001670 Alcohol dehydrogenase, iron-type YPA_RS20675 IPR001270 ClpA/B family YPA_RS20675 IPR002611 IstB-like ATP-binding protein YPA_RS20675 IPR003593 AAA+ ATPase domain YPA_RS20675 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS20675 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS20680 IPR001584 Integrase, catalytic core YPA_RS20680 IPR006120 Resolvase, HTH domain YPA_RS20680 IPR009057 Homeodomain-like YPA_RS20680 IPR012337 Ribonuclease H-like domain YPA_RS20685 IPR001670 Alcohol dehydrogenase, iron-type YPA_RS20685 IPR018211 Alcohol dehydrogenase, iron-type, conserved site YPA_RS20690 IPR008000 Rhamnose mutarotase YPA_RS20690 IPR011008 Dimeric alpha-beta barrel YPA_RS20690 IPR013448 L-rhamnose 1-epimerase YPA_RS20695 IPR000424 Primosome PriB/single-strand DNA-binding YPA_RS20695 IPR011344 Single-stranded DNA-binding protein YPA_RS20695 IPR012340 Nucleic acid-binding, OB-fold YPA_RS20700 IPR003439 ABC transporter-like YPA_RS20700 IPR004602 UvrABC system subunit A YPA_RS20700 IPR013815 ATP-grasp fold, subdomain 1 YPA_RS20700 IPR017871 ABC transporter, conserved site YPA_RS20700 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS20705 IPR007351 Uncharacterised protein YjbR YPA_RS20710 IPR000796 Aspartate/other aminotransferase YPA_RS20710 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site YPA_RS20710 IPR004839 Aminotransferase, class I/classII YPA_RS20710 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPA_RS20710 IPR015424 Pyridoxal phosphate-dependent transferase YPA_RS20715 IPR000821 Alanine racemase YPA_RS20715 IPR001608 Alanine racemase, N-terminal YPA_RS20715 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal YPA_RS20715 IPR011079 Alanine racemase, C-terminal YPA_RS20715 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site YPA_RS20715 IPR029066 PLP-binding barrel YPA_RS20720 IPR003593 AAA+ ATPase domain YPA_RS20720 IPR007692 DNA helicase, DnaB type YPA_RS20720 IPR007693 DNA helicase, DnaB-like, N-terminal YPA_RS20720 IPR007694 DNA helicase, DnaB-like, C-terminal YPA_RS20720 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal YPA_RS20720 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS20725 IPR002085 Alcohol dehydrogenase superfamily, zinc-type YPA_RS20725 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site YPA_RS20725 IPR011032 GroES (chaperonin 10)-like YPA_RS20725 IPR013149 Alcohol dehydrogenase, C-terminal YPA_RS20725 IPR013154 Alcohol dehydrogenase GroES-like YPA_RS20725 IPR016040 NAD(P)-binding domain YPA_RS20725 IPR020843 Polyketide synthase, enoylreductase YPA_RS20730 IPR014318 Phage shock protein, PspG YPA_RS20735 IPR001269 tRNA-dihydrouridine synthase YPA_RS20735 IPR004653 tRNA-dihydrouridine synthase, TIM-barrel, YjbN YPA_RS20735 IPR013785 Aldolase-type TIM barrel YPA_RS20735 IPR018517 tRNA-dihydrouridine synthase, conserved site YPA_RS20740 IPR002481 Ferric-uptake regulator YPA_RS20740 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS20745 IPR006197 Peptidase S24, LexA-like YPA_RS20745 IPR006199 LexA repressor, DNA-binding domain YPA_RS20745 IPR006200 LexA repressor YPA_RS20745 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS20745 IPR015927 Peptidase S24/S26A/S26B/S26C YPA_RS20745 IPR019759 Peptidase S24/S26A/S26B YPA_RS20745 IPR028360 Peptidase S24/S26, beta-ribbon domain YPA_RS20750 IPR000829 Diacylglycerol kinase, prokaryotic YPA_RS20755 IPR002123 Phospholipid/glycerol acyltransferase YPA_RS20755 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase YPA_RS20755 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB YPA_RS20760 IPR000537 UbiA prenyltransferase family YPA_RS20760 IPR006370 4-hydroxybenzoate polyprenyl transferase YPA_RS20760 IPR030470 YPA_RS20760 YPA_RS20760 IPR031103 YPA_RS20760 YPA_RS20765 IPR007440 Chorismate--pyruvate lyase YPA_RS20765 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain YPA_RS20770 IPR005546 Autotransporter beta-domain YPA_RS20770 IPR006315 Outer membrane autotransporter barrel YPA_RS20770 IPR011050 Pectin lyase fold/virulence factor YPA_RS20770 IPR012332 P22 tailspike C-terminal domain-like YPA_RS20775 IPR003610 Carbohydrate-binding module family 5/12 YPA_RS20775 IPR003961 Fibronectin, type III YPA_RS20775 IPR006094 FAD linked oxidase, N-terminal YPA_RS20775 IPR012951 Berberine/berberine-like YPA_RS20775 IPR013783 Immunoglobulin-like fold YPA_RS20775 IPR016166 FAD-binding, type 2 YPA_RS20775 IPR016167 FAD-binding, type 2, subdomain 1 YPA_RS20785 IPR007087 Zinc finger, C2H2 YPA_RS20790 IPR020846 Major facilitator superfamily domain YPA_RS20795 IPR008962 PapD-like YPA_RS20795 IPR016147 PapD, N-terminal, bacterial YPA_RS20795 IPR016148 Pili assembly chaperone, C-terminal domain YPA_RS20800 IPR000015 Outer membrane usher protein YPA_RS20800 IPR018030 Fimbrial membrane usher, conserved site YPA_RS20800 IPR025885 PapC, N-terminal domain YPA_RS20800 IPR025949 PapC-like, C-terminal domain YPA_RS20805 IPR010546 Protein of unknown function DUF1120 YPA_RS20810 IPR003325 TerD domain YPA_RS20815 IPR003325 TerD domain YPA_RS20820 IPR005496 Integral membrane protein TerC YPA_RS20820 IPR022369 Integral membrane protein TerC, riboswitch-linked YPA_RS20825 IPR007791 Heat shock protein DnaJ-like protein DjlA YPA_RS20825 IPR029024 TerB-like YPA_RS20830 IPR003325 TerD domain YPA_RS20830 IPR017115 Tellurite resistance, TerA YPA_RS20835 IPR003325 TerD domain YPA_RS20840 IPR011226 ATP-grasp family YPA_RS20840 IPR013816 ATP-grasp fold, subdomain 2 YPA_RS20845 IPR011214 Uncharacterised conserved protein UCP020967 YPA_RS20845 IPR022537 TRSP domain YPA_RS20845 IPR029057 Phosphoribosyltransferase-like YPA_RS20850 IPR023214 HAD-like domain YPA_RS20850 IPR024197 Uncharacterised conserved protein UCP030802 YPA_RS20855 IPR011215 Phosphoribosyl transferase YPA_RS20855 IPR028157 PELOTA RNA-binding domain YPA_RS20860 IPR011206 Citrate lyase beta subunit-like YPA_RS20860 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain YPA_RS20865 IPR011233 Tellurite/Phi/PacB toxicity protection, TerW YPA_RS20865 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS20870 IPR003171 Methylenetetrahydrofolate reductase YPA_RS20870 IPR029041 FAD-linked oxidoreductase-like YPA_RS20875 IPR006638 Elongator protein 3/MiaB/NifB YPA_RS20875 IPR007197 Radical SAM YPA_RS20875 IPR023404 Radical SAM, alpha/beta horseshoe YPA_RS20875 IPR026332 Putative heme utilization radical SAM enzyme HutW YPA_RS20880 IPR010413 Heme utilization carrier protein HutX like YPA_RS20885 IPR016040 NAD(P)-binding domain YPA_RS20890 IPR000531 TonB-dependent receptor, beta-barrel YPA_RS20890 IPR010916 TonB box, conserved site YPA_RS20890 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor YPA_RS20890 IPR011276 TonB-dependent haem/haemoglobin receptor YPA_RS20890 IPR012910 TonB-dependent receptor, plug YPA_RS20895 IPR007845 Haemin-degrading HemS/ChuX domain YPA_RS20900 IPR002491 ABC transporter periplasmic binding domain YPA_RS20905 IPR000522 ABC transporter, permease protein YPA_RS20905 IPR029022 ABC transporter, BtuC-like YPA_RS20910 IPR003439 ABC transporter-like YPA_RS20910 IPR003593 AAA+ ATPase domain YPA_RS20910 IPR017871 ABC transporter, conserved site YPA_RS20910 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS20915 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme YPA_RS20915 IPR006233 Cystathionine beta-lyase, bacterial YPA_RS20915 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPA_RS20915 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPA_RS20915 IPR015424 Pyridoxal phosphate-dependent transferase YPA_RS20925 IPR000847 Transcription regulator HTH, LysR YPA_RS20925 IPR005119 LysR, substrate-binding YPA_RS20925 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS20930 IPR001455 TusA-like domain YPA_RS20935 IPR007272 Sulphur transport domain YPA_RS20940 IPR006135 Type III secretion system substrate exporter YPA_RS20940 IPR006307 Type III exporter system, secretion apparatus protein BsaZ YPA_RS20940 IPR029025 Type III secretion system substrate exporter, C-terminal YPA_RS20945 IPR002010 Type III secretion system inner membrane R protein YPA_RS20945 IPR006304 Type III secretion protein SpaR/YscT YPA_RS20950 IPR002191 Bacterial export protein family 3 YPA_RS20950 IPR006306 Type III secretion protein HrpO YPA_RS20955 IPR005773 Yop virulence translocation protein R YPA_RS20955 IPR005838 Type III secretion system inner membrane P protein YPA_RS20960 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb YPA_RS20960 IPR001543 Surface presentation of antigen (SpoA) YPA_RS20960 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO YPA_RS20975 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain YPA_RS20975 IPR003593 AAA+ ATPase domain YPA_RS20975 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain YPA_RS20975 IPR005714 ATPase, type III secretion system, FliI/YscN YPA_RS20975 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site YPA_RS20975 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS20980 IPR001712 Type III secretion system FHIPEP YPA_RS20980 IPR006302 Type III secretion protein HrcV YPA_RS20980 IPR025505 FHIPEP conserved site YPA_RS20985 IPR009335 Type III secretion system HrpE /V-type ATP synthase subunit E YPA_RS20985 IPR012842 Type III secretion system HrpE/YscL YPA_RS20990 IPR025292 Type III secretion system protein YPA_RS20995 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ YPA_RS20995 IPR006182 Secretory protein YscJ/FliF YPA_RS21000 IPR012670 Type III secretion system, YscI/HrpB YPA_RS21005 IPR010437 Type III secretion system SsaH YPA_RS21010 IPR011841 Type III secretion system, needle protein YPA_RS21010 IPR021123 Type III secretion, needle-protein-like YPA_RS21015 IPR009057 Homeodomain-like YPA_RS21015 IPR018060 DNA binding HTH domain, AraC-type YPA_RS21015 IPR020449 Transcription regulator HTH, AraC- type YPA_RS21020 IPR012671 Type III secretion system, secretion protein E YPA_RS21025 IPR012843 Type III secretion system YscD/HrpQ YPA_RS21025 IPR032034 YPA_RS21025 YPA_RS21030 IPR003522 Type III secretion system outer membrane pore YscC/HrcC YPA_RS21030 IPR004845 Type II secretion system GspD, conserved site YPA_RS21030 IPR004846 Type II/III secretion system YPA_RS21030 IPR005644 NolW-like YPA_RS21035 IPR001789 Signal transduction response regulator, receiver domain YPA_RS21035 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPA_RS21035 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPA_RS21035 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPA_RS21035 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain YPA_RS21035 IPR011006 CheY-like superfamily YPA_RS21040 IPR000792 Transcription regulator LuxR, C-terminal YPA_RS21040 IPR001789 Signal transduction response regulator, receiver domain YPA_RS21040 IPR011006 CheY-like superfamily YPA_RS21040 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS21040 IPR016032 Signal transduction response regulator, C-terminal effector YPA_RS21045 IPR001991 Sodium:dicarboxylate symporter YPA_RS21045 IPR018107 Sodium:dicarboxylate symporter, conserved site YPA_RS21045 IPR033380 YPA_RS21045 YPA_RS21050 IPR000873 AMP-dependent synthetase/ligase YPA_RS21050 IPR011904 Acetate-CoA ligase YPA_RS21050 IPR020845 AMP-binding, conserved site YPA_RS21050 IPR025110 AMP-binding enzyme C-terminal domain YPA_RS21050 IPR032387 YPA_RS21050 YPA_RS21055 IPR007436 Protein of unknown function DUF485 YPA_RS21060 IPR001734 Sodium/solute symporter YPA_RS21060 IPR014083 Cation/acetate symporter ActP YPA_RS21060 IPR018212 Sodium/solute symporter, conserved site YPA_RS21065 IPR025890 Abhydrolase, bacterial YPA_RS21065 IPR029058 Alpha/Beta hydrolase fold YPA_RS21070 IPR001584 Integrase, catalytic core YPA_RS21070 IPR006120 Resolvase, HTH domain YPA_RS21070 IPR009057 Homeodomain-like YPA_RS21070 IPR012337 Ribonuclease H-like domain YPA_RS21075 IPR001270 ClpA/B family YPA_RS21075 IPR002611 IstB-like ATP-binding protein YPA_RS21075 IPR003593 AAA+ ATPase domain YPA_RS21075 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS21075 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS21085 IPR006664 Outer membrane protein, bacterial YPA_RS21085 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal YPA_RS21090 IPR000160 GGDEF domain YPA_RS21090 IPR029787 Nucleotide cyclase YPA_RS21090 IPR033417 YPA_RS21090 YPA_RS21095 IPR025293 Protein of unknown function DUF4154 YPA_RS21100 IPR001757 Cation-transporting P-type ATPase YPA_RS21100 IPR004014 Cation-transporting P-type ATPase, N-terminal YPA_RS21100 IPR006068 Cation-transporting P-type ATPase, C-terminal YPA_RS21100 IPR008250 P-type ATPase, A domain YPA_RS21100 IPR018303 P-type ATPase, phosphorylation site YPA_RS21100 IPR023214 HAD-like domain YPA_RS21100 IPR023298 P-type ATPase, transmembrane domain YPA_RS21100 IPR023299 P-type ATPase, cytoplasmic domain N YPA_RS21105 IPR000189 Prokaryotic transglycosylase, active site YPA_RS21105 IPR008258 Lytic transglycosylase-like SLT domain YPA_RS21105 IPR008939 Lytic transglycosylase, superhelical U-shaped YPA_RS21105 IPR012289 Lytic transglycosylase, superhelical linker YPA_RS21105 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain YPA_RS21105 IPR023346 Lysozyme-like domain YPA_RS21110 IPR000831 Trp repressor YPA_RS21110 IPR010921 Trp repressor/replication initiator YPA_RS21110 IPR013335 Trp repressor, bacterial YPA_RS21115 IPR002786 Non-canonical purine NTP phosphatase YPA_RS21115 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 YPA_RS21115 IPR029001 Inosine triphosphate pyrophosphatase-like YPA_RS21120 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site YPA_RS21120 IPR013078 Histidine phosphatase superfamily, clade-1 YPA_RS21120 IPR023086 Phosphoglycerate mutase, GpmB, probable YPA_RS21120 IPR029033 Histidine phosphatase superfamily YPA_RS21125 IPR009057 Homeodomain-like YPA_RS21125 IPR010499 Bacterial transcription activator, effector binding YPA_RS21125 IPR011256 Regulatory factor, effector binding domain YPA_RS21125 IPR018060 DNA binding HTH domain, AraC-type YPA_RS21125 IPR018062 HTH domain AraC-type, conserved site YPA_RS21125 IPR020449 Transcription regulator HTH, AraC- type YPA_RS21125 IPR029442 GyrI-like small molecule binding domain YPA_RS21130 IPR010292 Uncharacterised protein family CreA YPA_RS21135 IPR001789 Signal transduction response regulator, receiver domain YPA_RS21135 IPR001867 Signal transduction response regulator, C-terminal YPA_RS21135 IPR011006 CheY-like superfamily YPA_RS21135 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS21135 IPR016032 Signal transduction response regulator, C-terminal effector YPA_RS21140 IPR001048 Aspartate/glutamate/uridylate kinase YPA_RS21140 IPR001341 Aspartate kinase domain YPA_RS21140 IPR001342 Homoserine dehydrogenase, catalytic YPA_RS21140 IPR002912 ACT domain YPA_RS21140 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding YPA_RS21140 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I YPA_RS21140 IPR016040 NAD(P)-binding domain YPA_RS21140 IPR018042 Aspartate kinase, conserved site YPA_RS21140 IPR019811 Homoserine dehydrogenase, conserved site YPA_RS21140 IPR027795 GATS-like ACT domain YPA_RS21145 IPR000870 Homoserine kinase YPA_RS21145 IPR006203 GHMP kinase, ATP-binding, conserved site YPA_RS21145 IPR006204 GHMP kinase N-terminal domain YPA_RS21145 IPR013750 GHMP kinase, C-terminal domain YPA_RS21145 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPA_RS21145 IPR020568 Ribosomal protein S5 domain 2-type fold YPA_RS21150 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site YPA_RS21150 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPA_RS21150 IPR004450 Threonine synthase-like YPA_RS21150 IPR029144 Threonine synthase, N-terminal YPA_RS21155 IPR005583 Uncharacterised protein family UPF0246 YPA_RS21160 IPR001585 Transaldolase YPA_RS21160 IPR004730 Transaldolase type 1 YPA_RS21160 IPR013785 Aldolase-type TIM barrel YPA_RS21160 IPR018225 Transaldolase, active site YPA_RS21165 IPR001453 Molybdopterin binding domain YPA_RS21165 IPR008284 Molybdenum cofactor biosynthesis, conserved site YPA_RS21170 IPR011701 Major facilitator superfamily YPA_RS21170 IPR020846 Major facilitator superfamily domain YPA_RS21175 IPR011024 Gamma-crystallin-related YPA_RS21175 IPR016181 Acyl-CoA N-acyltransferase YPA_RS21180 IPR000791 GPR1/FUN34/yaaH YPA_RS21185 IPR012725 Chaperone DnaK YPA_RS21185 IPR013126 Heat shock protein 70 family YPA_RS21185 IPR018181 Heat shock protein 70, conserved site YPA_RS21185 IPR029047 Heat shock protein 70kD, peptide-binding domain YPA_RS21185 IPR029048 Heat shock protein 70kD, C-terminal domain YPA_RS21190 IPR001305 Heat shock protein DnaJ, cysteine-rich domain YPA_RS21190 IPR001623 DnaJ domain YPA_RS21190 IPR002939 Chaperone DnaJ, C-terminal YPA_RS21190 IPR008971 HSP40/DnaJ peptide-binding YPA_RS21190 IPR012724 Chaperone DnaJ YPA_RS21190 IPR018253 DnaJ domain, conserved site YPA_RS21195 IPR004670 Na+/H+ antiporter NhaA YPA_RS21195 IPR023171 Na/H antiporter domain YPA_RS21200 IPR000847 Transcription regulator HTH, LysR YPA_RS21200 IPR005119 LysR, substrate-binding YPA_RS21200 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS21205 IPR002583 Ribosomal protein S20 YPA_RS21215 IPR002606 Riboflavin kinase, bacterial YPA_RS21215 IPR004821 Cytidyltransferase-like domain YPA_RS21215 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPA_RS21215 IPR015864 FAD synthetase YPA_RS21215 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic YPA_RS21215 IPR023465 Riboflavin kinase domain YPA_RS21215 IPR023468 Riboflavin kinase YPA_RS21220 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPA_RS21220 IPR002300 Aminoacyl-tRNA synthetase, class Ia YPA_RS21220 IPR002301 Isoleucine-tRNA ligase YPA_RS21220 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain YPA_RS21220 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding YPA_RS21220 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase YPA_RS21220 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding YPA_RS21220 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPA_RS21220 IPR023585 Isoleucine-tRNA ligase, type 1 YPA_RS21225 IPR001872 Peptidase A8, signal peptidase II YPA_RS21230 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain YPA_RS21230 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type YPA_RS21235 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YPA_RS21250 IPR002686 Transposase IS200-like YPA_RS21255 IPR000846 Dihydrodipicolinate reductase, N-terminal YPA_RS21255 IPR016040 NAD(P)-binding domain YPA_RS21255 IPR022663 Dihydrodipicolinate reductase, C-terminal YPA_RS21255 IPR022664 Dihydrodipicolinate reductase, conserved site YPA_RS21255 IPR023940 Dihydrodipicolinate reductase, bacterial YPA_RS21260 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain YPA_RS21260 IPR006274 Carbamoyl-phosphate synthase, small subunit YPA_RS21260 IPR017926 Glutamine amidotransferase YPA_RS21260 IPR029062 Class I glutamine amidotransferase-like YPA_RS21265 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain YPA_RS21265 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain YPA_RS21265 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain YPA_RS21265 IPR006275 Carbamoyl-phosphate synthase, large subunit YPA_RS21265 IPR011607 Methylglyoxal synthase-like domain YPA_RS21265 IPR013815 ATP-grasp fold, subdomain 1 YPA_RS21265 IPR013816 ATP-grasp fold, subdomain 2 YPA_RS21265 IPR016185 Pre-ATP-grasp domain YPA_RS21270 IPR001123 Lysine-type exporter protein (LYSE/YGGA) YPA_RS21275 IPR010619 Domain of unknown function DUF1212 YPA_RS21280 IPR024528 Domain of unknown function DUF3815 YPA_RS21285 IPR001796 Dihydrofolate reductase domain YPA_RS21285 IPR012259 Dihydrofolate reductase YPA_RS21285 IPR017925 Dihydrofolate reductase conserved site YPA_RS21285 IPR024072 Dihydrofolate reductase-like domain YPA_RS21290 IPR002686 Transposase IS200-like YPA_RS21295 IPR022231 Protein of unknown function DUF3757 YPA_RS21300 IPR022231 Protein of unknown function DUF3757 YPA_RS21305 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YPA_RS21305 IPR004843 Calcineurin-like phosphoesterase domain, apaH type YPA_RS21305 IPR029052 Metallo-dependent phosphatase-like YPA_RS21310 IPR007474 ApaG domain YPA_RS21310 IPR023065 Uncharacterised protein family ApaG YPA_RS21315 IPR001737 Ribosomal RNA adenine methylase transferase YPA_RS21315 IPR011530 Ribosomal RNA adenine dimethylase YPA_RS21315 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site YPA_RS21315 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal YPA_RS21315 IPR023165 rRNA adenine dimethylase-like YPA_RS21315 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPA_RS21320 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA YPA_RS21320 IPR024084 Isopropylmalate dehydrogenase-like domain YPA_RS21325 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type YPA_RS21325 IPR008880 Trigger factor, C-terminal domain YPA_RS21325 IPR015391 SurA N-terminal YPA_RS21325 IPR023034 Peptidyl-prolyl isomerase SurA YPA_RS21325 IPR027304 Trigger factor/SurA domain YPA_RS21330 IPR005653 Organic solvent tolerance-like, N-terminal YPA_RS21330 IPR007543 Organic solvent tolerance protein, C-terminal YPA_RS21330 IPR020889 Lipopolysaccharide assembly, LptD YPA_RS21335 IPR001623 DnaJ domain YPA_RS21335 IPR007791 Heat shock protein DnaJ-like protein DjlA YPA_RS21335 IPR023749 DnaJ-like protein DjlA YPA_RS21335 IPR029024 TerB-like YPA_RS21340 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F YPA_RS21340 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site YPA_RS21340 IPR020103 Pseudouridine synthase, catalytic domain YPA_RS21345 IPR018754 Protein of unknown function DUF2285 YPA_RS21350 IPR010657 ImpA, N-terminal YPA_RS21355 IPR008312 Uncharacterised conserved protein UCP028301 YPA_RS21360 IPR010269 Protein of unknown function DUF877 YPA_RS21365 IPR001270 ClpA/B family YPA_RS21365 IPR002611 IstB-like ATP-binding protein YPA_RS21365 IPR003593 AAA+ ATPase domain YPA_RS21365 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS21365 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS21370 IPR001584 Integrase, catalytic core YPA_RS21370 IPR006120 Resolvase, HTH domain YPA_RS21370 IPR009057 Homeodomain-like YPA_RS21370 IPR012337 Ribonuclease H-like domain YPA_RS21375 IPR007895 MASE1 YPA_RS21380 IPR000792 Transcription regulator LuxR, C-terminal YPA_RS21380 IPR001789 Signal transduction response regulator, receiver domain YPA_RS21380 IPR011006 CheY-like superfamily YPA_RS21380 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS21380 IPR016032 Signal transduction response regulator, C-terminal effector YPA_RS21385 IPR000917 Sulfatase YPA_RS21385 IPR012549 Domain of unknown function DUF1705 YPA_RS21385 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha YPA_RS21385 IPR017850 Alkaline-phosphatase-like, core domain YPA_RS21390 IPR022742 Putative lysophospholipase YPA_RS21390 IPR029058 Alpha/Beta hydrolase fold YPA_RS21395 IPR002293 Amino acid/polyamine transporter I YPA_RS21395 IPR004840 Amino acid permease, conserved site YPA_RS21395 IPR004841 Amino acid permease/ SLC12A domain YPA_RS21400 IPR001106 Aromatic amino acid lyase YPA_RS21400 IPR005921 Histidine ammonia-lyase YPA_RS21400 IPR008948 L-Aspartase-like YPA_RS21400 IPR022313 Phenylalanine/histidine ammonia-lyases, active site YPA_RS21400 IPR024083 Fumarase/histidase, N-terminal YPA_RS21405 IPR023636 Urocanase conserved site YPA_RS21405 IPR023637 Urocanase YPA_RS21410 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPA_RS21415 IPR000836 Phosphoribosyltransferase domain YPA_RS21415 IPR029057 Phosphoribosyltransferase-like YPA_RS21420 IPR000620 Drug/metabolite transporter YPA_RS21430 IPR001584 Integrase, catalytic core YPA_RS21430 IPR006120 Resolvase, HTH domain YPA_RS21430 IPR009057 Homeodomain-like YPA_RS21430 IPR012337 Ribonuclease H-like domain YPA_RS21435 IPR001270 ClpA/B family YPA_RS21435 IPR002611 IstB-like ATP-binding protein YPA_RS21435 IPR003593 AAA+ ATPase domain YPA_RS21435 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS21435 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPA_RS21440 IPR013816 ATP-grasp fold, subdomain 2 YPA_RS21445 IPR002491 ABC transporter periplasmic binding domain YPA_RS21450 IPR000522 ABC transporter, permease protein YPA_RS21450 IPR029022 ABC transporter, BtuC-like YPA_RS21455 IPR000522 ABC transporter, permease protein YPA_RS21455 IPR029022 ABC transporter, BtuC-like YPA_RS21460 IPR003439 ABC transporter-like YPA_RS21460 IPR003593 AAA+ ATPase domain YPA_RS21460 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS21465 IPR011204 Virulence protein RhuM-like YPA_RS21475 IPR001387 Cro/C1-type helix-turn-helix domain YPA_RS21475 IPR010982 Lambda repressor-like, DNA-binding domain YPA_RS21480 IPR025668 Transposase DDE domain YPA_RS21490 IPR007684 Zinc finger, Ogr/Delta-type YPA_RS21500 IPR002104 Integrase, catalytic YPA_RS21500 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPA_RS21500 IPR013762 Integrase-like, catalytic core YPA_RS21500 IPR023109 Integrase/recombinase, N-terminal YPA_RS21500 IPR025166 Domain of unknown function DUF4102 YPA_RS21505 IPR009057 Homeodomain-like YPA_RS21505 IPR018060 DNA binding HTH domain, AraC-type YPA_RS21505 IPR018062 HTH domain AraC-type, conserved site YPA_RS21505 IPR020449 Transcription regulator HTH, AraC- type YPA_RS21505 IPR028082 Periplasmic binding protein-like I YPA_RS21510 IPR001851 ABC transporter, permease YPA_RS21515 IPR003439 ABC transporter-like YPA_RS21515 IPR003593 AAA+ ATPase domain YPA_RS21515 IPR013455 ABC transporter, D-xylose, ATP-binding protein YPA_RS21515 IPR017871 ABC transporter, conserved site YPA_RS21515 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS21520 IPR013456 D-xylose ABC transporter, substrate-binding protein YPA_RS21520 IPR025997 Periplasmic binding protein domain YPA_RS21520 IPR028082 Periplasmic binding protein-like I YPA_RS21525 IPR001998 Xylose isomerase YPA_RS21525 IPR013022 Xylose isomerase-like, TIM barrel domain YPA_RS21525 IPR013452 Xylose isomerase, bacterial-type YPA_RS21530 IPR000577 YPA_RS21530 YPA_RS21530 IPR006000 Xylulokinase YPA_RS21530 IPR018483 Carbohydrate kinase, FGGY, conserved site YPA_RS21530 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPA_RS21530 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPA_RS21535 IPR000259 Fimbrial-type adhesion domain YPA_RS21535 IPR008966 Adhesion domain YPA_RS21540 IPR001829 Pili assembly chaperone, bacterial YPA_RS21540 IPR008962 PapD-like YPA_RS21540 IPR016147 PapD, N-terminal, bacterial YPA_RS21540 IPR016148 Pili assembly chaperone, C-terminal domain YPA_RS21540 IPR018046 Pili assembly chaperone, conserved site YPA_RS21550 IPR000259 Fimbrial-type adhesion domain YPA_RS21550 IPR008966 Adhesion domain YPA_RS21555 IPR002656 Acyltransferase 3 YPA_RS21555 IPR032905 YPA_RS21555 YPA_RS21565 IPR009057 Homeodomain-like YPA_RS21565 IPR010921 Trp repressor/replication initiator YPA_RS21565 IPR011991 Winged helix-turn-helix DNA-binding domain YPA_RS21570 IPR001584 Integrase, catalytic core YPA_RS21570 IPR012337 Ribonuclease H-like domain YPA_RS21570 IPR025948 HTH-like domain YPA_RS21575 IPR000150 Cof protein YPA_RS21575 IPR006379 HAD-superfamily hydrolase, subfamily IIB YPA_RS21575 IPR023214 HAD-like domain YPA_RS21580 IPR000565 DNA topoisomerase, type IIA, subunit B YPA_RS21580 IPR001241 DNA topoisomerase, type IIA YPA_RS21580 IPR002288 DNA gyrase B subunit, C-terminal YPA_RS21580 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPA_RS21580 IPR006171 Toprim domain YPA_RS21580 IPR011557 DNA gyrase, subunit B YPA_RS21580 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 YPA_RS21580 IPR013759 DNA topoisomerase, type IIA, central domain YPA_RS21580 IPR013760 DNA topoisomerase, type IIA-like domain YPA_RS21580 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPA_RS21580 IPR018522 DNA topoisomerase, type IIA, conserved site YPA_RS21580 IPR020568 Ribosomal protein S5 domain 2-type fold YPA_RS21585 IPR001238 DNA-binding, RecF YPA_RS21585 IPR003395 RecF/RecN/SMC, N-terminal YPA_RS21585 IPR018078 DNA-binding, RecF, conserved site YPA_RS21585 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS21590 IPR001001 DNA polymerase III, beta chain YPA_RS21590 IPR022634 DNA polymerase III, beta chain, N-terminal YPA_RS21590 IPR022635 DNA polymerase III, beta chain, C-terminal YPA_RS21590 IPR022637 DNA polymerase III, beta chain, central YPA_RS21595 IPR001957 Chromosomal replication control, initiator DnaA YPA_RS21595 IPR003593 AAA+ ATPase domain YPA_RS21595 IPR010921 Trp repressor/replication initiator YPA_RS21595 IPR013159 Chromosomal replication initiator, DnaA C-terminal YPA_RS21595 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) YPA_RS21595 IPR018312 Chromosomal replication control, initiator DnaA, conserved site YPA_RS21595 IPR020591 Chromosomal replication control, initiator DnaA-like YPA_RS21595 IPR024633 DnaA N-terminal domain YPA_RS21595 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS21600 IPR000271 Ribosomal protein L34 YPA_RS21600 IPR020939 Ribosomal protein L34, conserved site YPA_RS21605 IPR000100 Ribonuclease P YPA_RS21605 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPA_RS21605 IPR020539 Ribonuclease P, conserved site YPA_RS21605 IPR020568 Ribosomal protein S5 domain 2-type fold YPA_RS21610 IPR001708 Membrane insertase OXA1/ALB3/YidC YPA_RS21610 IPR019998 Membrane insertase YidC YPA_RS21610 IPR028053 Membrane insertase YidC, N-terminal YPA_RS21610 IPR028055 Membrane insertase YidC/Oxa1, C-terminal YPA_RS21615 IPR004520 tRNA modification GTPase MnmE YPA_RS21615 IPR005225 Small GTP-binding protein domain YPA_RS21615 IPR006073 GTP binding domain YPA_RS21615 IPR018948 GTP-binding protein TrmE, N-terminal YPA_RS21615 IPR025867 tRNA modification GTPase MnmE C-terminal domain YPA_RS21615 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 YPA_RS21615 IPR027368 tRNA modification GTPase MnmE domain 2 YPA_RS21615 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS21620 IPR010758 Trans-2-enoyl-CoA reductase YPA_RS21620 IPR024906 Enoyl reductase FAD binding domain YPA_RS21620 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative YPA_RS21635 IPR006043 Xanthine/uracil/vitamin C permease YPA_RS21635 IPR026033 Purine permease PbuG-like YPA_RS21635 IPR029940 YPA_RS21635 YPA_RS21640 IPR006439 HAD hydrolase, subfamily IA YPA_RS21640 IPR023214 HAD-like domain YPA_RS21645 IPR000515 MetI-like domain YPA_RS21645 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family YPA_RS21650 IPR000515 MetI-like domain YPA_RS21650 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family YPA_RS21655 IPR001638 Extracellular solute-binding protein, family 3 YPA_RS21655 IPR018313 Extracellular solute-binding protein, family 3, conserved site YPA_RS21660 IPR007607 Protein of unknown function DUF583 YPA_RS21665 IPR026022 PhoU domain YPA_RS21665 IPR028366 Phosphate transport system protein PhoU YPA_RS21670 IPR003439 ABC transporter-like YPA_RS21670 IPR003593 AAA+ ATPase domain YPA_RS21670 IPR005670 Phosphate transport system permease protein 1 YPA_RS21670 IPR017871 ABC transporter, conserved site YPA_RS21670 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS21675 IPR000515 MetI-like domain YPA_RS21675 IPR005672 Phosphate transport system permease protein PstA YPA_RS21680 IPR000515 MetI-like domain YPA_RS21680 IPR011864 Phosphate ABC transporter, permease protein PstC YPA_RS21685 IPR005673 ABC transporter, phosphate-binding protein PstS YPA_RS21685 IPR024370 PBP domain YPA_RS21690 IPR001347 Sugar isomerase (SIS) YPA_RS21690 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising YPA_RS21690 IPR029055 Nucleophile aminohydrolases, N-terminal YPA_RS21695 IPR001451 Bacterial transferase hexapeptide repeat YPA_RS21695 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase YPA_RS21695 IPR011004 Trimeric LpxA-like YPA_RS21695 IPR018357 Hexapeptide transferase, conserved site YPA_RS21695 IPR025877 MobA-like NTP transferase domain YPA_RS21695 IPR029044 Nucleotide-diphospho-sugar transferases YPA_RS21700 IPR001469 ATPase, F1 complex, delta/epsilon subunit YPA_RS21700 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal YPA_RS21700 IPR020547 ATPase, F1 complex, delta/epsilon subunit, C-terminal domain YPA_RS21705 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain YPA_RS21705 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal YPA_RS21705 IPR003593 AAA+ ATPase domain YPA_RS21705 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain YPA_RS21705 IPR005722 ATPase, F1 complex, beta subunit YPA_RS21705 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site YPA_RS21705 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal YPA_RS21705 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS21710 IPR000131 ATPase, F1 complex, gamma subunit YPA_RS21710 IPR023632 ATPase, F1 complex, gamma subunit conserved site YPA_RS21710 IPR023633 ATPase, F1 complex, gamma subunit domain YPA_RS21715 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain YPA_RS21715 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal YPA_RS21715 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain YPA_RS21715 IPR005294 ATPase, F1 complex, alpha subunit YPA_RS21715 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site YPA_RS21715 IPR023366 ATP synthase subunit alpha-like domain YPA_RS21715 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPA_RS21720 IPR000711 ATPase, OSCP/delta subunit YPA_RS21720 IPR020781 ATPase, OSCP/delta subunit, conserved site YPA_RS21720 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain YPA_RS21725 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast YPA_RS21725 IPR005864 ATPase, F0 complex, subunit B, bacterial YPA_RS21725 IPR028987 F-type ATP synthase subunit B-like, membrane domain YPA_RS21730 IPR000454 ATPase, F0 complex, subunit C YPA_RS21730 IPR002379 V-ATPase proteolipid subunit C-like domain YPA_RS21730 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast YPA_RS21730 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site YPA_RS21735 IPR000568 ATPase, F0 complex, subunit A YPA_RS21735 IPR023011 ATPase, F0 complex, subunit A, active site YPA_RS21740 IPR005598 ATP synthase protein I YPA_RS21745 IPR003682 rRNA small subunit methyltransferase G YPA_RS21745 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPA_RS21750 IPR002218 Glucose-inhibited division protein A-related YPA_RS21750 IPR004416 Glucose-inhibited division protein A YPA_RS21750 IPR020595 Glucose-inhibited division protein A-related, conserved site YPA_RS21750 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPA_RS21750 IPR026904 GidA associated domain 3 YPA_RS22085 IPR010272 Type VI secretion system, VCA0110 YPA_RS22090 IPR010272 Type VI secretion system, VCA0110 YPA_RS22315 IPR006120 Resolvase, HTH domain YPA_RS22315 IPR009057 Homeodomain-like YPA_RS22330 IPR003855 K+ potassium transporter YPA_RS22435 IPR011701 Major facilitator superfamily YPA_RS22435 IPR020846 Major facilitator superfamily domain YPA_RS22490 IPR005697 Homoserine O-succinyltransferase YPA_RS22490 IPR029062 Class I glutamine amidotransferase-like YPA_RS22510 IPR006254 Isocitrate lyase YPA_RS22510 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain YPA_RS22520 IPR010452 Isocitrate dehydrogenase kinasephosphatase YPA_RS22525 IPR010452 Isocitrate dehydrogenase kinasephosphatase YPA_RS22575 IPR025157 Haemagluttinin repeat YPA_RS22610 IPR001672 Phosphoglucose isomerase (PGI) YPA_RS22610 IPR018189 Phosphoglucose isomerase, conserved site