locus-tag class description CH58_RS00070 PF01904 Protein of unknown function DUF72 CH58_RS00115 PF01297 Zinc-uptake complex component A periplasmic CH58_RS00135 PF01380 SIS domain CH58_RS00135 PF01418 Helix-turn-helix domain, rpiR family CH58_RS00370 PF00872 Transposase, Mutator family CH58_RS00415 PF06450 Bacterial Na+/H+ antiporter B (NhaB) CH58_RS00485 PF04285 Protein of unknown function (DUF444) CH58_RS00635 PF01709 Transcriptional regulator CH58_RS00640 PF01709 Transcriptional regulator CH58_RS00675 PF17864 RuvB AAA lid domain CH58_RS00675 PF05491 RuvB C-terminal winged helix domain CH58_RS00675 PF05496 Holliday junction DNA helicase RuvB P-loop domain CH58_RS00705 PF08525 Opacity-associated protein A N-terminal motif CH58_RS00705 PF01476 LysM domain CH58_RS00705 PF01551 Peptidase family M23 CH58_RS00715 PF02887 Pyruvate kinase, alpha/beta domain CH58_RS00715 PF00224 Pyruvate kinase, barrel domain CH58_RS00800 PF01612 3'-5' exonuclease CH58_RS00800 PF00570 HRDC domain CH58_RS01060 PF01124 MAPEG family CH58_RS01065 PF01904 Protein of unknown function DUF72 CH58_RS01070 PF01336 OB-fold nucleic acid binding domain CH58_RS01070 PF02938 GAD domain CH58_RS01070 PF00152 tRNA synthetases class II (D, K and N) CH58_RS01075 PF00293 NUDIX domain CH58_RS01080 PF01709 Transcriptional regulator CH58_RS01085 PF02075 Crossover junction endodeoxyribonuclease RuvC CH58_RS01090 PF01797 Transposase IS200 like CH58_RS01095 PF01330 RuvA N terminal domain CH58_RS01095 PF07499 RuvA, C-terminal domain CH58_RS01100 PF05496 Holliday junction DNA helicase RuvB P-loop domain CH58_RS01100 PF17864 RuvB AAA lid domain CH58_RS01100 PF05491 RuvB C-terminal winged helix domain CH58_RS01105 PF00950 ABC 3 transport family CH58_RS01110 PF00005 ABC transporter CH58_RS01115 PF01297 Zinc-uptake complex component A periplasmic CH58_RS01120 PF01551 Peptidase family M23 CH58_RS01120 PF08525 Opacity-associated protein A N-terminal motif CH58_RS01120 PF01476 LysM domain CH58_RS01125 PF03279 Bacterial lipid A biosynthesis acyltransferase CH58_RS01130 PF02887 Pyruvate kinase, alpha/beta domain CH58_RS01130 PF00224 Pyruvate kinase, barrel domain CH58_RS01135 PF01418 Helix-turn-helix domain, rpiR family CH58_RS01135 PF01380 SIS domain CH58_RS01140 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CH58_RS01140 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CH58_RS01150 PF01081 KDPG and KHG aldolase CH58_RS01155 PF00893 Small Multidrug Resistance protein CH58_RS01160 PF00893 Small Multidrug Resistance protein CH58_RS01165 PF01042 Endoribonuclease L-PSP CH58_RS01170 PF04851 Type III restriction enzyme, res subunit CH58_RS01170 PF13307 Helicase C-terminal domain CH58_RS01175 PF00814 Glycoprotease family CH58_RS01180 PF03843 Outer membrane lipoprotein Slp family CH58_RS01185 PF13193 AMP-binding enzyme C-terminal domain CH58_RS01185 PF00501 AMP-binding enzyme CH58_RS01190 PF01612 3'-5' exonuclease CH58_RS01190 PF00570 HRDC domain CH58_RS01195 PF03776 Septum formation topological specificity factor MinE CH58_RS01200 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CH58_RS01205 PF03775 Septum formation inhibitor MinC, C-terminal domain CH58_RS01205 PF05209 Septum formation inhibitor MinC, N-terminal domain CH58_RS01210 PF05166 YcgL domain CH58_RS01215 PF13406 Transglycosylase SLT domain CH58_RS01220 PF01557 Fumarylacetoacetate (FAA) hydrolase family CH58_RS01225 PF03692 Putative zinc- or iron-chelating domain CH58_RS01230 PF00589 Phage integrase family CH58_RS01230 PF12167 Arm DNA-binding domain CH58_RS01250 PF01695 IstB-like ATP binding protein CH58_RS01400 PF02413 Caudovirales tail fibre assembly protein, lambda gpK CH58_RS01410 PF00872 Transposase, Mutator family CH58_RS01420 PF00266 Aminotransferase class-V CH58_RS01435 PF02600 Disulfide bond formation protein DsbB CH58_RS01440 PF06450 Bacterial Na+/H+ antiporter B (NhaB) CH58_RS01445 PF07840 FadR C-terminal domain CH58_RS01445 PF00392 Bacterial regulatory proteins, gntR family CH58_RS01450 PF04293 SpoVR like protein CH58_RS01455 PF01266 FAD dependent oxidoreductase CH58_RS01460 PF07690 Major Facilitator Superfamily CH58_RS01465 PF05726 Pirin C-terminal cupin domain CH58_RS01465 PF02678 Pirin CH58_RS01470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH58_RS01470 PF03466 LysR substrate binding domain CH58_RS01480 PF04285 Protein of unknown function (DUF444) CH58_RS01485 PF06798 PrkA serine protein kinase C-terminal domain CH58_RS01485 PF08298 PrkA AAA domain CH58_RS01490 PF06629 MltA-interacting protein MipA CH58_RS01495 PF01263 Aldose 1-epimerase CH58_RS01500 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CH58_RS01500 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CH58_RS01505 PF01641 SelR domain CH58_RS01510 PF07023 Protein of unknown function (DUF1315) CH58_RS01515 PF00857 Isochorismatase family CH58_RS01520 PF17763 Glutaminase/Asparaginase C-terminal domain CH58_RS01520 PF00710 Asparaginase, N-terminal CH58_RS01525 PF01343 Peptidase family S49 CH58_RS01530 PF00881 Nitroreductase family CH58_RS01535 PF02769 AIR synthase related protein, C-terminal domain CH58_RS01535 PF00586 AIR synthase related protein, N-terminal domain CH58_RS01540 PF01751 Toprim domain CH58_RS01540 PF01131 DNA topoisomerase CH58_RS01545 PF07383 Protein of unknown function (DUF1496) CH58_RS01550 PF00293 NUDIX domain CH58_RS01555 PF03372 Endonuclease/Exonuclease/phosphatase family CH58_RS01560 PF03466 LysR substrate binding domain CH58_RS01560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH58_RS01570 PF00872 Transposase, Mutator family CH58_RS01575 PF01842 ACT domain CH58_RS01575 PF00551 Formyl transferase CH58_RS01580 PF02810 SEC-C motif CH58_RS01585 PF00072 Response regulator receiver domain CH58_RS01590 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CH58_RS01590 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CH58_RS01590 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CH58_RS01595 PF00816 H-NS histone family CH58_RS01600 PF00265 Thymidine kinase CH58_RS01605 PF01695 IstB-like ATP binding protein CH58_RS01625 PF00171 Aldehyde dehydrogenase family CH58_RS01625 PF00465 Iron-containing alcohol dehydrogenase CH58_RS01630 PF01914 MarC family integral membrane protein CH58_RS01635 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CH58_RS01640 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS01645 PF12911 N-terminal TM domain of oligopeptide transport permease C CH58_RS01645 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS01650 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CH58_RS01650 PF00005 ABC transporter CH58_RS01655 PF00005 ABC transporter CH58_RS01655 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CH58_RS01670 PF04269 Protein of unknown function, DUF440 CH58_RS01675 PF13396 Phospholipase_D-nuclease N-terminal CH58_RS01675 PF13091 PLD-like domain CH58_RS01680 PF13505 Outer membrane protein beta-barrel domain CH58_RS01690 PF03795 YCII-related domain CH58_RS01695 PF03544 Gram-negative bacterial TonB protein C-terminal CH58_RS01700 PF00872 Transposase, Mutator family CH58_RS01705 PF03061 Thioesterase superfamily CH58_RS01710 PF04279 Intracellular septation protein A CH58_RS01735 PF03922 OmpW family CH58_RS01745 PF00290 Tryptophan synthase alpha chain CH58_RS01750 PF00291 Pyridoxal-phosphate dependent enzyme CH58_RS01755 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CH58_RS01755 PF00218 Indole-3-glycerol phosphate synthase CH58_RS01760 PF02885 Glycosyl transferase family, helical bundle domain CH58_RS01760 PF00591 Glycosyl transferase family, a/b domain CH58_RS01765 PF00117 Glutamine amidotransferase class-I CH58_RS01770 PF00425 chorismate binding enzyme CH58_RS01770 PF04715 Anthranilate synthase component I, N terminal region CH58_RS01785 PF02811 PHP domain CH58_RS01790 PF01300 Telomere recombination CH58_RS01795 PF00849 RNA pseudouridylate synthase CH58_RS01795 PF01479 S4 domain CH58_RS01800 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CH58_RS01805 PF00106 short chain dehydrogenase CH58_RS01810 PF08496 Peptidase family S49 N-terminal CH58_RS01810 PF01343 Peptidase family S49 CH58_RS01815 PF10692 Protein of unknown function (DUF2498) CH58_RS01825 PF01396 Topoisomerase DNA binding C4 zinc finger CH58_RS01825 PF01751 Toprim domain CH58_RS01825 PF01131 DNA topoisomerase CH58_RS01825 PF08272 Topoisomerase I zinc-ribbon-like CH58_RS01830 PF03466 LysR substrate binding domain CH58_RS01830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH58_RS01840 PF00330 Aconitase family (aconitate hydratase) CH58_RS01840 PF00694 Aconitase C-terminal domain CH58_RS01845 PF00925 GTP cyclohydrolase II CH58_RS01850 PF01569 PAP2 superfamily CH58_RS01855 PF06305 Lipopolysaccharide assembly protein A domain CH58_RS01860 PF18073 Rubredoxin metal binding domain CH58_RS01870 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CH58_RS01875 PF01253 Translation initiation factor SUI1 CH58_RS01880 PF05433 Glycine zipper 2TM domain CH58_RS01885 PF00596 Class II Aldolase and Adducin N-terminal domain CH58_RS01895 PF00923 Transaldolase/Fructose-6-phosphate aldolase CH58_RS01900 PF04328 Selenoprotein, putative CH58_RS01905 PF13722 5TM C-terminal transporter carbon starvation CstA CH58_RS01905 PF02554 Carbon starvation protein CstA CH58_RS01910 PF08206 Ribonuclease B OB domain CH58_RS01910 PF00773 RNB domain CH58_RS01910 PF00575 S1 RNA binding domain CH58_RS01910 PF17876 Cold shock domain CH58_RS01915 PF07690 Major Facilitator Superfamily CH58_RS01920 PF01370 NAD dependent epimerase/dehydratase family CH58_RS01925 PF00730 HhH-GPD superfamily base excision DNA repair protein CH58_RS01925 PF00633 Helix-hairpin-helix motif CH58_RS01925 PF10576 Iron-sulfur binding domain of endonuclease III CH58_RS01930 PF02508 Rnf-Nqr subunit, membrane protein CH58_RS01935 PF04205 FMN-binding domain CH58_RS01940 PF03116 NQR2, RnfD, RnfE family CH58_RS01945 PF12833 Helix-turn-helix domain CH58_RS01945 PF06445 GyrI-like small molecule binding domain CH58_RS01950 PF13237 4Fe-4S dicluster domain CH58_RS01950 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CH58_RS01950 PF13375 RnfC Barrel sandwich hybrid domain CH58_RS01950 PF10531 SLBB domain CH58_RS01955 PF04060 Putative Fe-S cluster CH58_RS01960 PF02508 Rnf-Nqr subunit, membrane protein CH58_RS01965 PF10754 Protein of unknown function (DUF2569) CH58_RS01970 PF00005 ABC transporter CH58_RS01970 PF03412 Peptidase C39 family CH58_RS01970 PF00664 ABC transporter transmembrane region CH58_RS01975 PF00664 ABC transporter transmembrane region CH58_RS01975 PF00005 ABC transporter CH58_RS01980 PF13533 Biotin-lipoyl like CH58_RS01990 PF03412 Peptidase C39 family CH58_RS01990 PF00664 ABC transporter transmembrane region CH58_RS01990 PF00005 ABC transporter CH58_RS01995 PF11762 L-arabinose isomerase C-terminal domain CH58_RS01995 PF02610 L-arabinose isomerase CH58_RS02000 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CH58_RS02005 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CH58_RS02010 PF00005 ABC transporter CH58_RS02015 PF02653 Branched-chain amino acid transport system / permease component CH58_RS02020 PF02311 AraC-like ligand binding domain CH58_RS02020 PF12833 Helix-turn-helix domain CH58_RS02025 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CH58_RS02025 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CH58_RS02030 PF13593 SBF-like CPA transporter family (DUF4137) CH58_RS02040 PF06097 Bacterial protein of unknown function (DUF945) CH58_RS02045 PF01238 Phosphomannose isomerase type I CH58_RS02050 PF00206 Lyase CH58_RS02050 PF10415 Fumarase C C-terminus CH58_RS02055 PF05472 DNA replication terminus site-binding protein (Ter protein) CH58_RS02065 PF03466 LysR substrate binding domain CH58_RS02065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH58_RS02070 PF00480 ROK family CH58_RS02085 PF00356 Bacterial regulatory proteins, lacI family CH58_RS02090 PF01695 IstB-like ATP binding protein CH58_RS02095 PF02796 Helix-turn-helix domain of resolvase CH58_RS02095 PF00665 Integrase core domain CH58_RS02105 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS02110 PF01048 Phosphorylase superfamily CH58_RS02110 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus CH58_RS02135 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CH58_RS02135 PF00205 Thiamine pyrophosphate enzyme, central domain CH58_RS02135 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CH58_RS02140 PF01842 ACT domain CH58_RS02145 PF13419 Haloacid dehalogenase-like hydrolase CH58_RS02160 PF00245 Alkaline phosphatase CH58_RS02165 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CH58_RS02165 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CH58_RS02170 PF13545 Crp-like helix-turn-helix domain CH58_RS02170 PF00027 Cyclic nucleotide-binding domain CH58_RS02175 PF00582 Universal stress protein family CH58_RS02180 PF02233 NAD(P) transhydrogenase beta subunit CH58_RS02185 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CH58_RS02185 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CH58_RS02185 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CH58_RS02195 PF07338 Protein of unknown function (DUF1471) CH58_RS02200 PF13520 Amino acid permease CH58_RS02210 PF00072 Response regulator receiver domain CH58_RS02210 PF00486 Transcriptional regulatory protein, C terminal CH58_RS02215 PF00512 His Kinase A (phospho-acceptor) domain CH58_RS02215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH58_RS02215 PF00672 HAMP domain CH58_RS02220 PF02074 Carboxypeptidase Taq (M32) metallopeptidase CH58_RS02225 PF01797 Transposase IS200 like CH58_RS02235 PF18807 Tripartite Tc toxins repeat CH58_RS02235 PF14431 YwqJ-like deaminase CH58_RS02250 PF04264 YceI-like domain CH58_RS02255 PF01292 Prokaryotic cytochrome b561 CH58_RS02270 PF00089 Trypsin CH58_RS02285 PF11898 Domain of unknown function (DUF3418) CH58_RS02285 PF00271 Helicase conserved C-terminal domain CH58_RS02285 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CH58_RS02285 PF00270 DEAD/DEAH box helicase CH58_RS02285 PF04408 Helicase associated domain (HA2) CH58_RS02295 PF01695 IstB-like ATP binding protein CH58_RS02300 PF01695 IstB-like ATP binding protein CH58_RS02305 PF00270 DEAD/DEAH box helicase CH58_RS02305 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CH58_RS02305 PF11898 Domain of unknown function (DUF3418) CH58_RS02305 PF04408 Helicase associated domain (HA2) CH58_RS02305 PF00271 Helicase conserved C-terminal domain CH58_RS02310 PF02525 Flavodoxin-like fold CH58_RS02315 PF04198 Putative sugar-binding domain CH58_RS02315 PF00325 Bacterial regulatory proteins, crp family CH58_RS02320 PF08125 Mannitol dehydrogenase C-terminal domain CH58_RS02320 PF01232 Mannitol dehydrogenase Rossmann domain CH58_RS02325 PF07027 Protein of unknown function (DUF1318) CH58_RS02330 PF13617 YnbE-like lipoprotein CH58_RS02335 PF11739 Dicarboxylate transport CH58_RS02340 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CH58_RS02340 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CH58_RS02345 PF03724 META domain CH58_RS02350 PF03891 Domain of unknown function (DUF333) CH58_RS02355 PF02308 MgtC family CH58_RS02360 PF00893 Small Multidrug Resistance protein CH58_RS02365 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CH58_RS02365 PF10371 Domain of unknown function CH58_RS02365 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CH58_RS02365 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CH58_RS02365 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CH58_RS02370 PF01171 PP-loop family CH58_RS02375 PF07859 alpha/beta hydrolase fold CH58_RS02385 PF01544 CorA-like Mg2+ transporter protein CH58_RS02390 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CH58_RS02395 PF00246 Zinc carboxypeptidase CH58_RS02400 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CH58_RS02400 PF13378 Enolase C-terminal domain-like CH58_RS02405 PF08534 Redoxin CH58_RS02410 PF01797 Transposase IS200 like CH58_RS02415 PF00158 Sigma-54 interaction domain CH58_RS02415 PF18024 Helix-turn-helix domain CH58_RS02420 PF09722 Protein of unknown function (DUF2384) CH58_RS02425 PF08808 RES domain CH58_RS02430 PF05128 Domain of unknown function (DUF697) CH58_RS02435 PF04317 YcjX-like family, DUF463 CH58_RS02445 PF04024 PspC domain CH58_RS02450 PF06667 Phage shock protein B CH58_RS02455 PF04012 PspA/IM30 family CH58_RS02460 PF02954 Bacterial regulatory protein, Fis family CH58_RS02460 PF00158 Sigma-54 interaction domain CH58_RS02465 PF01797 Transposase IS200 like CH58_RS02480 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CH58_RS02485 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS02490 PF12911 N-terminal TM domain of oligopeptide transport permease C CH58_RS02490 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS02495 PF00005 ABC transporter CH58_RS02495 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CH58_RS02500 PF00005 ABC transporter CH58_RS02510 PF00854 POT family CH58_RS02515 PF04893 Yip1 domain CH58_RS02520 PF11656 YjbD family (DUF3811) CH58_RS02525 PF00043 Glutathione S-transferase, C-terminal domain CH58_RS02525 PF02798 Glutathione S-transferase, N-terminal domain CH58_RS02530 PF08543 Phosphomethylpyrimidine kinase CH58_RS02535 PF01479 S4 domain CH58_RS02535 PF00579 tRNA synthetases class I (W and Y) CH58_RS02540 PF01243 Pyridoxamine 5'-phosphate oxidase CH58_RS02540 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CH58_RS02545 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme CH58_RS02550 PF03702 Anhydro-N-acetylmuramic acid kinase CH58_RS02555 PF05433 Glycine zipper 2TM domain CH58_RS02560 PF01047 MarR family CH58_RS02565 PF00248 Aldo/keto reductase family CH58_RS02570 PF06945 Protein of unknown function (DUF1289) CH58_RS02575 PF08019 Phosphoethanolamine transferase EptA/EptB CH58_RS02575 PF00884 Sulfatase CH58_RS02580 PF16925 Tetracyclin repressor-like, C-terminal domain CH58_RS02580 PF00440 Bacterial regulatory proteins, tetR family CH58_RS02585 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CH58_RS02590 PF14431 YwqJ-like deaminase CH58_RS02590 PF18807 Tripartite Tc toxins repeat CH58_RS02595 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CH58_RS02600 PF00929 Exonuclease CH58_RS02605 PF00462 Glutaredoxin CH58_RS02615 PF00877 NlpC/P60 family CH58_RS02620 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CH58_RS02620 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CH58_RS02625 PF00356 Bacterial regulatory proteins, lacI family CH58_RS02630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH58_RS02630 PF03466 LysR substrate binding domain CH58_RS02635 PF07690 Major Facilitator Superfamily CH58_RS02645 PF00677 Lumazine binding domain CH58_RS02650 PF01554 MatE CH58_RS02665 PF00224 Pyruvate kinase, barrel domain CH58_RS02665 PF02887 Pyruvate kinase, alpha/beta domain CH58_RS02670 PF04728 Lipoprotein leucine-zipper CH58_RS02680 PF01797 Transposase IS200 like CH58_RS02685 PF00665 Integrase core domain CH58_RS02685 PF02796 Helix-turn-helix domain of resolvase CH58_RS02690 PF01695 IstB-like ATP binding protein CH58_RS02695 PF01476 LysM domain CH58_RS02695 PF03734 L,D-transpeptidase catalytic domain CH58_RS02695 PF17969 L,D-transpeptidase C-terminal domain CH58_RS02700 PF02657 Fe-S metabolism associated domain CH58_RS02705 PF00266 Aminotransferase class-V CH58_RS02710 PF01458 Uncharacterized protein family (UPF0051) CH58_RS02715 PF00005 ABC transporter CH58_RS02720 PF01458 Uncharacterized protein family (UPF0051) CH58_RS02725 PF01521 Iron-sulphur cluster biosynthesis CH58_RS02735 PF03061 Thioesterase superfamily CH58_RS02740 PF02913 FAD linked oxidases, C-terminal domain CH58_RS02740 PF01565 FAD binding domain CH58_RS02740 PF13183 4Fe-4S dicluster domain CH58_RS02745 PF01594 AI-2E family transporter CH58_RS02750 PF00391 PEP-utilising enzyme, mobile domain CH58_RS02750 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CH58_RS02750 PF02896 PEP-utilising enzyme, TIM barrel domain CH58_RS02755 PF03618 Kinase/pyrophosphorylase CH58_RS02760 PF00793 DAHP synthetase I family CH58_RS02770 PF03099 Biotin/lipoate A/B protein ligase family CH58_RS02770 PF10437 Bacterial lipoate protein ligase C-terminus CH58_RS02775 PF00877 NlpC/P60 family CH58_RS02785 PF00892 EamA-like transporter family CH58_RS02790 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase CH58_RS02795 PF01522 Polysaccharide deacetylase CH58_RS02800 PF00551 Formyl transferase CH58_RS02800 PF01370 NAD dependent epimerase/dehydratase family CH58_RS02800 PF02911 Formyl transferase, C-terminal domain CH58_RS02805 PF00535 Glycosyl transferase family 2 CH58_RS02810 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CH58_RS02815 PF00005 ABC transporter CH58_RS02820 PF00255 Glutathione peroxidase CH58_RS02825 PF01032 FecCD transport family CH58_RS02835 PF00216 Bacterial DNA-binding protein CH58_RS02840 PF03483 B3/4 domain CH58_RS02840 PF03147 Ferredoxin-fold anticodon binding domain CH58_RS02840 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CH58_RS02840 PF01588 Putative tRNA binding domain CH58_RS02840 PF03484 tRNA synthetase B5 domain CH58_RS02845 PF01409 tRNA synthetases class II core domain (F) CH58_RS02845 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CH58_RS02850 PF00453 Ribosomal protein L20 CH58_RS02855 PF01632 Ribosomal protein L35 CH58_RS02860 PF00707 Translation initiation factor IF-3, C-terminal domain CH58_RS02860 PF05198 Translation initiation factor IF-3, N-terminal domain CH58_RS02865 PF03129 Anticodon binding domain CH58_RS02865 PF02824 TGS domain CH58_RS02865 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CH58_RS02865 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CH58_RS02870 PF13619 KTSC domain CH58_RS02885 PF01914 MarC family integral membrane protein CH58_RS02890 PF01464 Transglycosylase SLT domain CH58_RS02895 PF01297 Zinc-uptake complex component A periplasmic CH58_RS02900 PF00005 ABC transporter CH58_RS02905 PF00950 ABC 3 transport family CH58_RS02910 PF00950 ABC 3 transport family CH58_RS02920 PF03881 Fructosamine kinase CH58_RS02925 PF14002 YniB-like protein CH58_RS02930 PF13419 Haloacid dehalogenase-like hydrolase CH58_RS02940 PF07883 Cupin domain CH58_RS02945 PF04962 KduI/IolB family CH58_RS02955 PF06917 Periplasmic pectate lyase CH58_RS02960 PF01695 IstB-like ATP binding protein CH58_RS02965 PF02796 Helix-turn-helix domain of resolvase CH58_RS02965 PF00665 Integrase core domain CH58_RS02970 PF00665 Integrase core domain CH58_RS02970 PF02796 Helix-turn-helix domain of resolvase CH58_RS02975 PF06917 Periplasmic pectate lyase CH58_RS02980 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS02985 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS02990 PF17912 MalK OB fold domain CH58_RS02990 PF03459 TOBE domain CH58_RS02990 PF00005 ABC transporter CH58_RS02995 PF01547 Bacterial extracellular solute-binding protein CH58_RS03000 PF06178 Oligogalacturonate-specific porin protein (KdgM) CH58_RS03005 PF04307 LexA-binding, inner membrane-associated putative hydrolase CH58_RS03010 PF00375 Sodium:dicarboxylate symporter family CH58_RS03015 PF01510 N-acetylmuramoyl-L-alanine amidase CH58_RS03020 PF09339 IclR helix-turn-helix domain CH58_RS03020 PF01614 Bacterial transcriptional regulator CH58_RS03025 PF14583 Oligogalacturonate lyase CH58_RS03030 PF07690 Major Facilitator Superfamily CH58_RS03035 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CH58_RS03035 PF02753 Pili assembly chaperone PapD, C-terminal domain CH58_RS03045 PF00577 Outer membrane usher protein CH58_RS03045 PF13953 PapC C-terminal domain CH58_RS03045 PF13954 PapC N-terminal domain CH58_RS03050 PF02753 Pili assembly chaperone PapD, C-terminal domain CH58_RS03050 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CH58_RS03055 PF00419 Fimbrial protein CH58_RS03060 PF01435 Peptidase family M48 CH58_RS03065 PF11818 C-terminal domain of tail specific protease (DUF3340) CH58_RS03065 PF00595 PDZ domain CH58_RS03065 PF03572 Peptidase family S41 CH58_RS03065 PF17804 Tail specific protease N-terminal domain CH58_RS03070 PF04352 ProQ/FINO family CH58_RS03070 PF17516 ProQ C-terminal domain CH58_RS03075 PF13185 GAF domain CH58_RS03080 PF04403 Paraquat-inducible protein A CH58_RS03085 PF02470 MlaD protein CH58_RS03105 PF02753 Pili assembly chaperone PapD, C-terminal domain CH58_RS03105 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CH58_RS03120 PF07351 Protein of unknown function (DUF1480) CH58_RS03130 PF02796 Helix-turn-helix domain of resolvase CH58_RS03130 PF00665 Integrase core domain CH58_RS03135 PF01695 IstB-like ATP binding protein CH58_RS03160 PF01168 Alanine racemase, N-terminal domain CH58_RS03160 PF00842 Alanine racemase, C-terminal domain CH58_RS03170 PF05662 Coiled stalk of trimeric autotransporter adhesin CH58_RS03170 PF05658 Head domain of trimeric autotransporter adhesin CH58_RS03170 PF13018 Extended Signal Peptide of Type V secretion system CH58_RS03170 PF03895 YadA-like membrane anchor domain CH58_RS03175 PF13018 Extended Signal Peptide of Type V secretion system CH58_RS03175 PF03895 YadA-like membrane anchor domain CH58_RS03175 PF05658 Head domain of trimeric autotransporter adhesin CH58_RS03175 PF05662 Coiled stalk of trimeric autotransporter adhesin CH58_RS03180 PF01510 N-acetylmuramoyl-L-alanine amidase CH58_RS03190 PF04344 Chemotaxis phosphatase, CheZ CH58_RS03195 PF00072 Response regulator receiver domain CH58_RS03200 PF00072 Response regulator receiver domain CH58_RS03200 PF01339 CheB methylesterase CH58_RS03205 PF03705 CheR methyltransferase, all-alpha domain CH58_RS03205 PF01739 CheR methyltransferase, SAM binding domain CH58_RS03210 PF02203 Tar ligand binding domain homologue CH58_RS03210 PF00672 HAMP domain CH58_RS03210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CH58_RS03215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CH58_RS03215 PF00672 HAMP domain CH58_RS03215 PF02203 Tar ligand binding domain homologue CH58_RS03230 PF12951 Passenger-associated-transport-repeat CH58_RS03235 PF13309 HTH domain CH58_RS03235 PF08348 YheO-like PAS domain CH58_RS03245 PF01042 Endoribonuclease L-PSP CH58_RS03250 PF07690 Major Facilitator Superfamily CH58_RS03255 PF01584 CheW-like domain CH58_RS03260 PF09078 CheY binding CH58_RS03260 PF02895 Signal transducing histidine kinase, homodimeric domain CH58_RS03260 PF01584 CheW-like domain CH58_RS03260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH58_RS03260 PF01627 Hpt domain CH58_RS03265 PF13677 Membrane MotB of proton-channel complex MotA/MotB CH58_RS03265 PF00691 OmpA family CH58_RS03270 PF01618 MotA/TolQ/ExbB proton channel family CH58_RS03275 PF05280 Flagellar transcriptional activator (FlhC) CH58_RS03285 PF00690 Cation transporter/ATPase, N-terminus CH58_RS03285 PF00689 Cation transporting ATPase, C-terminus CH58_RS03290 PF02308 MgtC family CH58_RS03305 PF10781 Dextransucrase DSRB CH58_RS03310 PF00313 'Cold-shock' DNA-binding domain CH58_RS03315 PF01695 IstB-like ATP binding protein CH58_RS03320 PF01695 IstB-like ATP binding protein CH58_RS03325 PF00665 Integrase core domain CH58_RS03325 PF02796 Helix-turn-helix domain of resolvase CH58_RS03330 PF02929 Beta galactosidase small chain CH58_RS03330 PF16353 Domain of unknown function(DUF4981) CH58_RS03330 PF02837 Glycosyl hydrolases family 2, sugar binding domain CH58_RS03330 PF00703 Glycosyl hydrolases family 2 CH58_RS03330 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CH58_RS03335 PF16197 Ketoacyl-synthetase C-terminal extension CH58_RS03335 PF00550 Phosphopantetheine attachment site CH58_RS03335 PF08659 KR domain CH58_RS03335 PF14765 Polyketide synthase dehydratase CH58_RS03335 PF00107 Zinc-binding dehydrogenase CH58_RS03335 PF00698 Acyl transferase domain CH58_RS03335 PF00109 Beta-ketoacyl synthase, N-terminal domain CH58_RS03335 PF08240 Alcohol dehydrogenase GroES-like domain CH58_RS03335 PF02801 Beta-ketoacyl synthase, C-terminal domain CH58_RS03340 PF10777 Inner membrane protein YlaC CH58_RS03345 PF01037 Lrp/AsnC ligand binding domain CH58_RS03345 PF13404 AsnC-type helix-turn-helix domain CH58_RS03355 PF14001 YdfZ protein CH58_RS03360 PF00328 Histidine phosphatase superfamily (branch 2) CH58_RS03370 PF01638 HxlR-like helix-turn-helix CH58_RS03375 PF05368 NmrA-like family CH58_RS03380 PF08447 PAS fold CH58_RS03380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CH58_RS03390 PF00356 Bacterial regulatory proteins, lacI family CH58_RS03390 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CH58_RS03395 PF00180 Isocitrate/isopropylmalate dehydrogenase CH58_RS03400 PF00849 RNA pseudouridylate synthase CH58_RS03405 PF00293 NUDIX domain CH58_RS03415 PF04356 Protein of unknown function (DUF489) CH58_RS03420 PF08328 Adenylosuccinate lyase C-terminal CH58_RS03420 PF00206 Lyase CH58_RS03430 PF00072 Response regulator receiver domain CH58_RS03430 PF00486 Transcriptional regulatory protein, C terminal CH58_RS03435 PF08918 PhoQ Sensor CH58_RS03435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH58_RS03440 PF08007 Cupin superfamily protein CH58_RS03445 PF01546 Peptidase family M20/M25/M40 CH58_RS03445 PF07687 Peptidase dimerisation domain CH58_RS03450 PF02146 Sir2 family CH58_RS03455 PF00480 ROK family CH58_RS03460 PF12704 MacB-like periplasmic core domain CH58_RS03460 PF02687 FtsX-like permease family CH58_RS03465 PF00005 ABC transporter CH58_RS03470 PF02687 FtsX-like permease family CH58_RS03470 PF12704 MacB-like periplasmic core domain CH58_RS03475 PF00271 Helicase conserved C-terminal domain CH58_RS03475 PF02559 CarD-like/TRCF domain CH58_RS03475 PF03461 TRCF domain CH58_RS03475 PF17757 UvrB interaction domain CH58_RS03475 PF00270 DEAD/DEAH box helicase CH58_RS03480 PF05433 Glycine zipper 2TM domain CH58_RS03485 PF00872 Transposase, Mutator family CH58_RS03500 PF07992 Pyridine nucleotide-disulphide oxidoreductase CH58_RS03505 PF05728 Uncharacterised protein family (UPF0227) CH58_RS03510 PF00933 Glycosyl hydrolase family 3 N terminal domain CH58_RS03515 PF01636 Phosphotransferase enzyme family CH58_RS03520 PF08139 Prokaryotic membrane lipoprotein lipid attachment site CH58_RS03520 PF13036 Peptidoglycan-synthase activator LpoB CH58_RS03525 PF07233 Protein of unknown function (DUF1425) CH58_RS03530 PF01230 HIT domain CH58_RS03535 PF08501 Shikimate dehydrogenase substrate binding domain CH58_RS03540 PF01695 IstB-like ATP binding protein CH58_RS03545 PF00665 Integrase core domain CH58_RS03545 PF02796 Helix-turn-helix domain of resolvase CH58_RS03550 PF01797 Transposase IS200 like CH58_RS03555 PF02378 Phosphotransferase system, EIIC CH58_RS03555 PF00367 phosphotransferase system, EIIB CH58_RS03560 PF01026 TatD related DNase CH58_RS03565 PF09115 DNA polymerase III, delta subunit, C terminal CH58_RS03570 PF02223 Thymidylate kinase CH58_RS03575 PF02618 YceG-like family CH58_RS03580 PF01063 Amino-transferase class IV CH58_RS03585 PF01797 Transposase IS200 like CH58_RS03590 PF00109 Beta-ketoacyl synthase, N-terminal domain CH58_RS03590 PF02801 Beta-ketoacyl synthase, C-terminal domain CH58_RS03595 PF00550 Phosphopantetheine attachment site CH58_RS03605 PF00698 Acyl transferase domain CH58_RS03610 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CH58_RS03610 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CH58_RS03615 PF02504 Fatty acid synthesis protein CH58_RS03620 PF01783 Ribosomal L32p protein family CH58_RS03625 PF02620 Large ribosomal RNA subunit accumulation protein YceD CH58_RS03630 PF02545 Maf-like protein CH58_RS03635 PF01797 Transposase IS200 like CH58_RS03645 PF01479 S4 domain CH58_RS03645 PF00849 RNA pseudouridylate synthase CH58_RS03650 PF00575 S1 RNA binding domain CH58_RS03650 PF12111 Polyribonucleotide phosphorylase C terminal CH58_RS03650 PF10150 Ribonuclease E/G family CH58_RS03660 PF00872 Transposase, Mutator family CH58_RS03665 PF00872 Transposase, Mutator family CH58_RS03670 PF03992 Antibiotic biosynthesis monooxygenase CH58_RS03675 PF01979 Amidohydrolase family CH58_RS03680 PF06183 DinI-like family CH58_RS03690 PF13991 BssS protein family CH58_RS03700 PF01266 FAD dependent oxidoreductase CH58_RS03705 PF00872 Transposase, Mutator family CH58_RS03710 PF00196 Bacterial regulatory proteins, luxR family CH58_RS03710 PF00072 Response regulator receiver domain CH58_RS03715 PF01594 AI-2E family transporter CH58_RS03745 PF00765 Autoinducer synthase CH58_RS03750 PF03472 Autoinducer binding domain CH58_RS03750 PF00196 Bacterial regulatory proteins, luxR family CH58_RS03755 PF03466 LysR substrate binding domain CH58_RS03755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH58_RS03765 PF00083 Sugar (and other) transporter CH58_RS03775 PF00248 Aldo/keto reductase family CH58_RS03780 PF09618 CRISPR-associated protein (Cas_Csy4) CH58_RS03785 PF09615 CRISPR-associated protein (Cas_Csy3) CH58_RS03790 PF09614 CRISPR-associated protein (Cas_Csy2) CH58_RS03795 PF09611 CRISPR-associated protein (Cas_Csy1) CH58_RS03805 PF01867 CRISPR associated protein Cas1 CH58_RS03810 PF00924 Mechanosensitive ion channel CH58_RS03830 PF04041 beta-1,4-mannooligosaccharide phosphorylase CH58_RS03835 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS03840 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS03850 PF00356 Bacterial regulatory proteins, lacI family CH58_RS03855 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CH58_RS03855 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CH58_RS03855 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CH58_RS03855 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CH58_RS03860 PF17912 MalK OB fold domain CH58_RS03860 PF00005 ABC transporter CH58_RS03870 PF05594 Haemagluttinin repeat CH58_RS03870 PF13332 Hemagglutinin repeat CH58_RS03870 PF05860 haemagglutination activity domain CH58_RS03870 PF04829 Pre-toxin domain with VENN motif CH58_RS03870 PF15526 Novel toxin 21 CH58_RS03890 PF13332 Hemagglutinin repeat CH58_RS03890 PF05860 haemagglutination activity domain CH58_RS03890 PF04829 Pre-toxin domain with VENN motif CH58_RS03890 PF13018 Extended Signal Peptide of Type V secretion system CH58_RS03910 PF13018 Extended Signal Peptide of Type V secretion system CH58_RS03910 PF04829 Pre-toxin domain with VENN motif CH58_RS03910 PF13332 Hemagglutinin repeat CH58_RS03910 PF05860 haemagglutination activity domain CH58_RS03915 PF08479 POTRA domain, ShlB-type CH58_RS03915 PF17287 POTRA domain CH58_RS03915 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CH58_RS03920 PF00175 Oxidoreductase NAD-binding domain CH58_RS03920 PF00111 2Fe-2S iron-sulfur cluster binding domain CH58_RS03920 PF00970 Oxidoreductase FAD-binding domain CH58_RS03925 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CH58_RS03925 PF00355 Rieske [2Fe-2S] domain CH58_RS03930 PF02028 BCCT, betaine/carnitine/choline family transporter CH58_RS03940 PF00180 Isocitrate/isopropylmalate dehydrogenase CH58_RS03945 PF03466 LysR substrate binding domain CH58_RS03945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH58_RS03950 PF00356 Bacterial regulatory proteins, lacI family CH58_RS03955 PF02653 Branched-chain amino acid transport system / permease component CH58_RS03960 PF00005 ABC transporter CH58_RS03965 PF13407 Periplasmic binding protein domain CH58_RS03970 PF00107 Zinc-binding dehydrogenase CH58_RS03970 PF08240 Alcohol dehydrogenase GroES-like domain CH58_RS03975 PF00892 EamA-like transporter family CH58_RS03985 PF13649 Methyltransferase domain CH58_RS03990 PF00210 Ferritin-like domain CH58_RS04000 PF00497 Bacterial extracellular solute-binding proteins, family 3 CH58_RS04005 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS04010 PF00005 ABC transporter CH58_RS04015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CH58_RS04015 PF08447 PAS fold CH58_RS04015 PF13426 PAS domain CH58_RS04020 PF00665 Integrase core domain CH58_RS04020 PF02796 Helix-turn-helix domain of resolvase CH58_RS04025 PF01695 IstB-like ATP binding protein CH58_RS04030 PF05971 RNA methyltransferase CH58_RS04035 PF07338 Protein of unknown function (DUF1471) CH58_RS04040 PF02885 Glycosyl transferase family, helical bundle domain CH58_RS04045 PF13193 AMP-binding enzyme C-terminal domain CH58_RS04045 PF00501 AMP-binding enzyme CH58_RS04050 PF13378 Enolase C-terminal domain-like CH58_RS04055 PF00378 Enoyl-CoA hydratase/isomerase CH58_RS04060 PF12697 Alpha/beta hydrolase family CH58_RS04065 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CH58_RS04065 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CH58_RS04065 PF16582 Middle domain of thiamine pyrophosphate CH58_RS04070 PF00425 chorismate binding enzyme CH58_RS04080 PF05957 Bacterial protein of unknown function (DUF883) CH58_RS04095 PF00920 Dehydratase family CH58_RS04100 PF03928 Haem-degrading CH58_RS04105 PF07690 Major Facilitator Superfamily CH58_RS04110 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CH58_RS04110 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CH58_RS04120 PF00356 Bacterial regulatory proteins, lacI family CH58_RS04125 PF02638 Glycosyl hydrolase-like 10 CH58_RS04130 PF00106 short chain dehydrogenase CH58_RS04135 PF01202 Shikimate kinase CH58_RS04140 PF04074 YhcH/YjgK/YiaL CH58_RS04150 PF00361 Proton-conducting membrane transporter CH58_RS04155 PF00361 Proton-conducting membrane transporter CH58_RS04160 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CH58_RS04160 PF00361 Proton-conducting membrane transporter CH58_RS04165 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CH58_RS04170 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CH58_RS04175 PF12838 4Fe-4S dicluster domain CH58_RS04180 PF00146 NADH dehydrogenase CH58_RS04185 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CH58_RS04185 PF01568 Molydopterin dinucleotide binding domain CH58_RS04185 PF00384 Molybdopterin oxidoreductase CH58_RS04185 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CH58_RS04190 PF10531 SLBB domain CH58_RS04190 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CH58_RS04190 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CH58_RS04200 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CH58_RS04200 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CH58_RS04205 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CH58_RS04210 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CH58_RS04215 PF03466 LysR substrate binding domain CH58_RS04215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH58_RS04225 PF00155 Aminotransferase class I and II CH58_RS04240 PF02080 TrkA-C domain CH58_RS04240 PF03600 Citrate transporter CH58_RS04245 PF13419 Haloacid dehalogenase-like hydrolase CH58_RS04250 PF03887 YfbU domain CH58_RS04255 PF04217 Protein of unknown function, DUF412 CH58_RS04265 PF00871 Acetokinase family CH58_RS04270 PF01515 Phosphate acetyl/butaryl transferase CH58_RS04270 PF07085 DRTGG domain CH58_RS04275 PF00356 Bacterial regulatory proteins, lacI family CH58_RS04275 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CH58_RS04280 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CH58_RS04290 PF03611 PTS system sugar-specific permease component CH58_RS04295 PF00293 NUDIX domain CH58_RS04300 PF12850 Calcineurin-like phosphoesterase superfamily domain CH58_RS04310 PF08338 Domain of unknown function (DUF1731) CH58_RS04310 PF01370 NAD dependent epimerase/dehydratase family CH58_RS04315 PF00005 ABC transporter CH58_RS04320 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS04325 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS04330 PF00497 Bacterial extracellular solute-binding proteins, family 3 CH58_RS04335 PF02796 Helix-turn-helix domain of resolvase CH58_RS04335 PF00665 Integrase core domain CH58_RS04340 PF01695 IstB-like ATP binding protein CH58_RS04345 PF02441 Flavoprotein CH58_RS04350 PF00156 Phosphoribosyl transferase domain CH58_RS04355 PF02674 Colicin V production protein CH58_RS04360 PF05036 Sporulation related domain CH58_RS04365 PF02875 Mur ligase family, glutamate ligase domain CH58_RS04365 PF08245 Mur ligase middle domain CH58_RS04370 PF17848 Acetyl-coA carboxylase zinc finger domain CH58_RS04370 PF01039 Carboxyl transferase domain CH58_RS04375 PF09335 SNARE associated Golgi protein CH58_RS04380 PF01416 tRNA pseudouridine synthase CH58_RS04385 PF02774 Semialdehyde dehydrogenase, dimerisation domain CH58_RS04385 PF01118 Semialdehyde dehydrogenase, NAD binding domain CH58_RS04390 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CH58_RS04390 PF11890 Domain of unknown function (DUF3410) CH58_RS04390 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CH58_RS04405 PF00892 EamA-like transporter family CH58_RS04415 PF00419 Fimbrial protein CH58_RS04420 PF01177 Asp/Glu/Hydantoin racemase CH58_RS04425 PF02801 Beta-ketoacyl synthase, C-terminal domain CH58_RS04425 PF00109 Beta-ketoacyl synthase, N-terminal domain CH58_RS04430 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CH58_RS04430 PF01266 FAD dependent oxidoreductase CH58_RS04435 PF08891 YfcL protein CH58_RS04440 PF04315 Elongation factor P hydroxylase CH58_RS04445 PF01925 Sulfite exporter TauE/SafE CH58_RS04450 PF03411 Penicillin-insensitive murein endopeptidase CH58_RS04455 PF01264 Chorismate synthase CH58_RS04460 PF05175 Methyltransferase small domain CH58_RS04465 PF01713 Smr domain CH58_RS04475 PF00300 Histidine phosphatase superfamily (branch 1) CH58_RS04480 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CH58_RS04480 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CH58_RS04480 PF00378 Enoyl-CoA hydratase/isomerase CH58_RS04485 PF00108 Thiolase, N-terminal domain CH58_RS04485 PF02803 Thiolase, C-terminal domain CH58_RS04490 PF04175 Protein of unknown function (DUF406) CH58_RS04495 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CH58_RS04500 PF04333 MlaA lipoprotein CH58_RS04505 PF03918 Cytochrome C biogenesis protein CH58_RS04510 PF03918 Cytochrome C biogenesis protein CH58_RS04515 PF08534 Redoxin CH58_RS04520 PF01578 Cytochrome C assembly protein CH58_RS04520 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CH58_RS04525 PF03100 CcmE CH58_RS04530 PF04995 Heme exporter protein D (CcmD) CH58_RS04535 PF01578 Cytochrome C assembly protein CH58_RS04540 PF03379 CcmB protein CH58_RS04545 PF00005 ABC transporter CH58_RS04560 PF04011 LemA family CH58_RS04570 PF03831 PhnA domain CH58_RS04570 PF08274 PhnA Zinc-Ribbon CH58_RS04585 PF07024 ImpE protein CH58_RS04600 PF04717 Type VI secretion system, phage-baseplate injector CH58_RS04605 PF06744 Type VI secretion protein IcmF C-terminal CH58_RS04605 PF06761 Intracellular multiplication and human macrophage-killing CH58_RS04605 PF14331 ImcF-related N-terminal domain CH58_RS04615 PF01695 IstB-like ATP binding protein CH58_RS04620 PF01695 IstB-like ATP binding protein CH58_RS04635 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE CH58_RS04650 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath CH58_RS04655 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 CH58_RS04665 PF00577 Outer membrane usher protein CH58_RS04665 PF13954 PapC N-terminal domain CH58_RS04665 PF13953 PapC C-terminal domain CH58_RS04675 PF13954 PapC N-terminal domain CH58_RS04675 PF00577 Outer membrane usher protein CH58_RS04675 PF13953 PapC C-terminal domain CH58_RS04680 PF02753 Pili assembly chaperone PapD, C-terminal domain CH58_RS04680 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CH58_RS04685 PF16970 Type-1 fimbrial protein, A CH58_RS04690 PF00004 ATPase family associated with various cellular activities (AAA) CH58_RS04690 PF07724 AAA domain (Cdc48 subfamily) CH58_RS04690 PF10431 C-terminal, D2-small domain, of ClpB protein CH58_RS04690 PF17871 AAA lid domain CH58_RS04695 PF05947 Type VI secretion system, TssF CH58_RS04740 PF13406 Transglycosylase SLT domain CH58_RS04750 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS04755 PF00005 ABC transporter CH58_RS04765 PF05638 Type VI secretion system effector, Hcp CH58_RS04775 PF01568 Molydopterin dinucleotide binding domain CH58_RS04775 PF00384 Molybdopterin oxidoreductase CH58_RS04775 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CH58_RS04780 PF13247 4Fe-4S dicluster domain CH58_RS04780 PF12800 4Fe-4S binding domain CH58_RS04785 PF04976 DMSO reductase anchor subunit (DmsC) CH58_RS04790 PF02613 Nitrate reductase delta subunit CH58_RS04800 PF05643 Putative bacterial lipoprotein (DUF799) CH58_RS04810 PF03783 Curli production assembly/transport component CsgG CH58_RS04820 PF01292 Prokaryotic cytochrome b561 CH58_RS04825 PF00155 Aminotransferase class I and II CH58_RS04830 PF07350 Protein of unknown function (DUF1479) CH58_RS04835 PF02685 Glucokinase CH58_RS04845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH58_RS04845 PF03466 LysR substrate binding domain CH58_RS04850 PF00248 Aldo/keto reductase family CH58_RS04860 PF01566 Natural resistance-associated macrophage protein CH58_RS04865 PF07670 Nucleoside recognition CH58_RS04865 PF07662 Na+ dependent nucleoside transporter C-terminus CH58_RS04865 PF01773 Na+ dependent nucleoside transporter N-terminus CH58_RS04885 PF00749 tRNA synthetases class I (E and Q), catalytic domain CH58_RS04895 PF01797 Transposase IS200 like CH58_RS04915 PF12843 Putative quorum-sensing-regulated virulence factor CH58_RS04920 PF12826 Helix-hairpin-helix motif CH58_RS04920 PF03120 NAD-dependent DNA ligase OB-fold domain CH58_RS04920 PF00533 BRCA1 C Terminus (BRCT) domain CH58_RS04920 PF01653 NAD-dependent DNA ligase adenylation domain CH58_RS04920 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CH58_RS04925 PF04354 ZipA, C-terminal FtsZ-binding domain CH58_RS04935 PF00291 Pyridoxal-phosphate dependent enzyme CH58_RS04940 PF00381 PTS HPr component phosphorylation site CH58_RS04945 PF00391 PEP-utilising enzyme, mobile domain CH58_RS04945 PF05524 PEP-utilising enzyme, N-terminal CH58_RS04945 PF02896 PEP-utilising enzyme, TIM barrel domain CH58_RS04950 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CH58_RS04955 PF01797 Transposase IS200 like CH58_RS04965 PF00512 His Kinase A (phospho-acceptor) domain CH58_RS04965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH58_RS04965 PF00672 HAMP domain CH58_RS04965 PF16527 Two-component sensor protein CpxA, periplasmic domain CH58_RS04970 PF00486 Transcriptional regulatory protein, C terminal CH58_RS04970 PF00072 Response regulator receiver domain CH58_RS04975 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CH58_RS04980 PF12704 MacB-like periplasmic core domain CH58_RS04980 PF00005 ABC transporter CH58_RS04980 PF02687 FtsX-like permease family CH58_RS04985 PF07992 Pyridine nucleotide-disulphide oxidoreductase CH58_RS04985 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CH58_RS04990 PF00474 Sodium:solute symporter family CH58_RS05000 PF00557 Metallopeptidase family M24 CH58_RS05010 PF00155 Aminotransferase class I and II CH58_RS05020 PF00512 His Kinase A (phospho-acceptor) domain CH58_RS05020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH58_RS05020 PF00672 HAMP domain CH58_RS05025 PF00486 Transcriptional regulatory protein, C terminal CH58_RS05025 PF00072 Response regulator receiver domain CH58_RS05035 PF00291 Pyridoxal-phosphate dependent enzyme CH58_RS05040 PF00005 ABC transporter CH58_RS05045 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS05050 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS05060 PF07690 Major Facilitator Superfamily CH58_RS05065 PF01418 Helix-turn-helix domain, rpiR family CH58_RS05065 PF01380 SIS domain CH58_RS05075 PF04074 YhcH/YjgK/YiaL CH58_RS05080 PF00480 ROK family CH58_RS05085 PF12468 Type III secretion system leucine rich repeat protein CH58_RS05090 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase CH58_RS05095 PF00701 Dihydrodipicolinate synthetase family CH58_RS05100 PF04261 Dyp-type peroxidase family CH58_RS05105 PF06572 Protein of unknown function (DUF1131) CH58_RS05110 PF04076 Bacterial OB fold (BOF) protein CH58_RS05115 PF03797 Autotransporter beta-domain CH58_RS05115 PF03212 Pertactin CH58_RS05115 PF16168 Adhesin of bacterial autotransporter system, probable stalk CH58_RS05115 PF13018 Extended Signal Peptide of Type V secretion system CH58_RS05130 PF00583 Acetyltransferase (GNAT) family CH58_RS05135 PF01218 Coproporphyrinogen III oxidase CH58_RS05140 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CH58_RS05145 PF01515 Phosphate acetyl/butaryl transferase CH58_RS05145 PF00390 Malic enzyme, N-terminal domain CH58_RS05145 PF03949 Malic enzyme, NAD binding domain CH58_RS05155 PF01695 IstB-like ATP binding protein CH58_RS05160 PF01695 IstB-like ATP binding protein CH58_RS05170 PF00293 NUDIX domain CH58_RS05175 PF03264 NapC/NirT cytochrome c family, N-terminal region CH58_RS05180 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) CH58_RS05185 PF10518 TAT (twin-arginine translocation) pathway signal sequence CH58_RS05185 PF01568 Molydopterin dinucleotide binding domain CH58_RS05185 PF00384 Molybdopterin oxidoreductase CH58_RS05185 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CH58_RS05190 PF03927 NapD protein CH58_RS05195 PF12800 4Fe-4S binding domain CH58_RS05195 PF13187 4Fe-4S dicluster domain CH58_RS05195 PF00037 4Fe-4S binding domain CH58_RS05200 PF00072 Response regulator receiver domain CH58_RS05200 PF00196 Bacterial regulatory proteins, luxR family CH58_RS05210 PF00873 AcrB/AcrD/AcrF family CH58_RS05220 PF04307 LexA-binding, inner membrane-associated putative hydrolase CH58_RS05225 PF13186 Iron-sulfur cluster-binding domain CH58_RS05225 PF04055 Radical SAM superfamily CH58_RS05230 PF00884 Sulfatase CH58_RS05235 PF00005 ABC transporter CH58_RS05235 PF08402 TOBE domain CH58_RS05240 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS05255 PF03960 ArsC family CH58_RS05260 PF07687 Peptidase dimerisation domain CH58_RS05260 PF01546 Peptidase family M20/M25/M40 CH58_RS05265 PF02557 D-alanyl-D-alanine carboxypeptidase CH58_RS05270 PF13980 Uncharacterised protein family (UPF0370) CH58_RS05275 PF05127 Helicase CH58_RS05275 PF13718 GNAT acetyltransferase 2 CH58_RS05275 PF08351 Domain of unknown function (DUF1726) CH58_RS05275 PF17176 tRNA-binding domain CH58_RS05280 PF04284 Protein of unknown function (DUF441) CH58_RS05285 PF04228 Putative neutral zinc metallopeptidase CH58_RS05290 PF01259 SAICAR synthetase CH58_RS05295 PF01797 Transposase IS200 like CH58_RS05305 PF06804 NlpB/DapX lipoprotein CH58_RS05310 PF00701 Dihydrodipicolinate synthetase family CH58_RS05315 PF01842 ACT domain CH58_RS05320 PF00578 AhpC/TSA family CH58_RS05340 PF01594 AI-2E family transporter CH58_RS05345 PF07720 Tetratricopeptide repeat CH58_RS05345 PF01435 Peptidase family M48 CH58_RS05350 PF03960 ArsC family CH58_RS05355 PF00308 Bacterial dnaA protein CH58_RS05360 PF01797 Transposase IS200 like CH58_RS05370 PF02769 AIR synthase related protein, C-terminal domain CH58_RS05370 PF00586 AIR synthase related protein, N-terminal domain CH58_RS05375 PF00551 Formyl transferase CH58_RS05380 PF13302 Acetyltransferase (GNAT) domain CH58_RS05395 PF00005 ABC transporter CH58_RS05400 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS05405 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS05410 PF17941 Polyphosphate kinase C-terminal domain 1 CH58_RS05410 PF13090 Polyphosphate kinase C-terminal domain 2 CH58_RS05410 PF02503 Polyphosphate kinase middle domain CH58_RS05410 PF13089 Polyphosphate kinase N-terminal domain CH58_RS05415 PF02541 Ppx/GppA phosphatase family CH58_RS05425 PF00571 CBS domain CH58_RS05425 PF03448 MgtE intracellular N domain CH58_RS05425 PF01769 Divalent cation transporter CH58_RS05430 PF00012 Hsp70 protein CH58_RS05435 PF02796 Helix-turn-helix domain of resolvase CH58_RS05435 PF00665 Integrase core domain CH58_RS05440 PF01695 IstB-like ATP binding protein CH58_RS05445 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS05450 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS05460 PF00202 Aminotransferase class-III CH58_RS05465 PF00392 Bacterial regulatory proteins, gntR family CH58_RS05465 PF00155 Aminotransferase class I and II CH58_RS05470 PF08402 TOBE domain CH58_RS05470 PF00005 ABC transporter CH58_RS05475 PF13533 Biotin-lipoyl like CH58_RS05480 PF00873 AcrB/AcrD/AcrF family CH58_RS05485 PF00873 AcrB/AcrD/AcrF family CH58_RS05490 PF07690 Major Facilitator Superfamily CH58_RS05495 PF00672 HAMP domain CH58_RS05495 PF00512 His Kinase A (phospho-acceptor) domain CH58_RS05495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH58_RS05500 PF00672 HAMP domain CH58_RS05500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH58_RS05500 PF00512 His Kinase A (phospho-acceptor) domain CH58_RS05505 PF00486 Transcriptional regulatory protein, C terminal CH58_RS05505 PF00072 Response regulator receiver domain CH58_RS05510 PF07411 Domain of unknown function (DUF1508) CH58_RS05515 PF16325 Peptidase family U32 C-terminal domain CH58_RS05515 PF01136 Peptidase family U32 CH58_RS05520 PF00781 Diacylglycerol kinase catalytic domain CH58_RS05535 PF08543 Phosphomethylpyrimidine kinase CH58_RS05550 PF00872 Transposase, Mutator family CH58_RS05580 PF05638 Type VI secretion system effector, Hcp CH58_RS05585 PF01797 Transposase IS200 like CH58_RS05595 PF02540 NAD synthase CH58_RS05595 PF00117 Glutamine amidotransferase class-I CH58_RS05595 PF00958 GMP synthase C terminal domain CH58_RS05605 PF00478 IMP dehydrogenase / GMP reductase domain CH58_RS05605 PF00571 CBS domain CH58_RS05610 PF02601 Exonuclease VII, large subunit CH58_RS05610 PF13742 OB-fold nucleic acid binding domain CH58_RS05615 PF07191 zinc-ribbons CH58_RS05625 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CH58_RS05625 PF01926 50S ribosome-binding GTPase CH58_RS05630 PF13360 PQQ-like domain CH58_RS05635 PF09976 Tetratricopeptide repeat-like domain CH58_RS05640 PF03129 Anticodon binding domain CH58_RS05640 PF13393 Histidyl-tRNA synthetase CH58_RS05645 PF04551 GcpE protein CH58_RS05650 PF13464 Domain of unknown function (DUF4115) CH58_RS05660 PF04055 Radical SAM superfamily CH58_RS05665 PF00334 Nucleoside diphosphate kinase CH58_RS05680 PF16168 Adhesin of bacterial autotransporter system, probable stalk CH58_RS05680 PF03797 Autotransporter beta-domain CH58_RS05680 PF03212 Pertactin CH58_RS05685 PF03797 Autotransporter beta-domain CH58_RS05685 PF03212 Pertactin CH58_RS05685 PF16168 Adhesin of bacterial autotransporter system, probable stalk CH58_RS05695 PF14581 SseB protein C-terminal domain CH58_RS05695 PF07179 SseB protein N-terminal domain CH58_RS05700 PF00883 Cytosol aminopeptidase family, catalytic domain CH58_RS05700 PF12404 Peptidase CH58_RS05705 PF04384 Iron-sulphur cluster assembly CH58_RS05710 PF00111 2Fe-2S iron-sulfur cluster binding domain CH58_RS05715 PF00012 Hsp70 protein CH58_RS05720 PF07743 HSCB C-terminal oligomerisation domain CH58_RS05720 PF00226 DnaJ domain CH58_RS05725 PF01521 Iron-sulphur cluster biosynthesis CH58_RS05730 PF01592 NifU-like N terminal domain CH58_RS05735 PF00266 Aminotransferase class-V CH58_RS05740 PF02082 Transcriptional regulator CH58_RS05745 PF00588 SpoU rRNA Methylase family CH58_RS05750 PF00459 Inositol monophosphatase family CH58_RS05755 PF03824 High-affinity nickel-transport protein CH58_RS05760 PF06226 Protein of unknown function (DUF1007) CH58_RS05765 PF00874 PRD domain CH58_RS05770 PF12832 MFS_1 like family CH58_RS05775 PF13505 Outer membrane protein beta-barrel domain CH58_RS05785 PF00464 Serine hydroxymethyltransferase CH58_RS05790 PF00970 Oxidoreductase FAD-binding domain CH58_RS05790 PF00175 Oxidoreductase NAD-binding domain CH58_RS05790 PF00042 Globin CH58_RS05795 PF14502 Helix-turn-helix domain CH58_RS05795 PF14503 YhfZ C-terminal domain CH58_RS05800 PF14503 YhfZ C-terminal domain CH58_RS05800 PF14502 Helix-turn-helix domain CH58_RS05805 PF00543 Nitrogen regulatory protein P-II CH58_RS05810 PF02540 NAD synthase CH58_RS05810 PF00795 Carbon-nitrogen hydrolase CH58_RS05815 PF00072 Response regulator receiver domain CH58_RS05815 PF00158 Sigma-54 interaction domain CH58_RS05820 PF13942 YfhG lipoprotein CH58_RS05825 PF00512 His Kinase A (phospho-acceptor) domain CH58_RS05825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH58_RS05830 PF01797 Transposase IS200 like CH58_RS05850 PF02769 AIR synthase related protein, C-terminal domain CH58_RS05850 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CH58_RS05850 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CH58_RS05855 PF01464 Transglycosylase SLT domain CH58_RS05855 PF00497 Bacterial extracellular solute-binding proteins, family 3 CH58_RS05860 PF14437 MafB19-like deaminase CH58_RS05870 PF01380 SIS domain CH58_RS05875 PF01380 SIS domain CH58_RS05875 PF01418 Helix-turn-helix domain, rpiR family CH58_RS05880 PF12838 4Fe-4S dicluster domain CH58_RS05885 PF01797 Transposase IS200 like CH58_RS05895 PF01648 4'-phosphopantetheinyl transferase superfamily CH58_RS05900 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CH58_RS05905 PF01695 IstB-like ATP binding protein CH58_RS05910 PF00665 Integrase core domain CH58_RS05910 PF02796 Helix-turn-helix domain of resolvase CH58_RS05920 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CH58_RS05925 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS05930 PF00571 CBS domain CH58_RS05930 PF00005 ABC transporter CH58_RS05935 PF00268 Ribonucleotide reductase, small chain CH58_RS05940 PF02867 Ribonucleotide reductase, barrel domain CH58_RS05940 PF08343 Ribonucleotide reductase N-terminal CH58_RS05940 PF00317 Ribonucleotide reductase, all-alpha domain CH58_RS05945 PF07972 NrdI Flavodoxin like CH58_RS05955 PF06392 Acid shock protein repeat CH58_RS05960 PF09400 Protein of unknown function (DUF2002) CH58_RS05965 PF00872 Transposase, Mutator family CH58_RS05975 PF06711 Protein of unknown function (DUF1198) CH58_RS05985 PF00313 'Cold-shock' DNA-binding domain CH58_RS05990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CH58_RS05995 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS06000 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS06000 PF12911 N-terminal TM domain of oligopeptide transport permease C CH58_RS06005 PF00005 ABC transporter CH58_RS06010 PF00005 ABC transporter CH58_RS06015 PF00547 Urease, gamma subunit CH58_RS06020 PF00699 Urease beta subunit CH58_RS06025 PF01979 Amidohydrolase family CH58_RS06025 PF00449 Urease alpha-subunit, N-terminal domain CH58_RS06030 PF05194 UreE urease accessory protein, C-terminal domain CH58_RS06030 PF02814 UreE urease accessory protein, N-terminal domain CH58_RS06035 PF01730 UreF CH58_RS06040 PF02492 CobW/HypB/UreG, nucleotide-binding domain CH58_RS06045 PF01774 UreD urease accessory protein CH58_RS06050 PF03253 Urea transporter CH58_RS06055 PF03824 High-affinity nickel-transport protein CH58_RS06060 PF06411 HdeA/HdeB family CH58_RS06070 PF07885 Ion channel CH58_RS06070 PF02254 TrkA-N domain CH58_RS06075 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CH58_RS06080 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CH58_RS06090 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CH58_RS06095 PF02378 Phosphotransferase system, EIIC CH58_RS06100 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CH58_RS06105 PF12833 Helix-turn-helix domain CH58_RS06105 PF07883 Cupin domain CH58_RS06110 PF04794 YdjC-like protein CH58_RS06125 PF17206 SeqA protein N-terminal domain CH58_RS06125 PF03925 SeqA protein C-terminal domain CH58_RS06130 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CH58_RS06130 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CH58_RS06130 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CH58_RS06130 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CH58_RS06150 PF00486 Transcriptional regulatory protein, C terminal CH58_RS06150 PF00072 Response regulator receiver domain CH58_RS06155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH58_RS06155 PF13493 Domain of unknown function (DUF4118) CH58_RS06155 PF00512 His Kinase A (phospho-acceptor) domain CH58_RS06155 PF02702 Osmosensitive K+ channel His kinase sensor domain CH58_RS06155 PF13492 GAF domain CH58_RS06160 PF02669 K+-transporting ATPase, c chain CH58_RS06170 PF03814 Potassium-transporting ATPase A subunit CH58_RS06185 PF10725 Protein of unknown function (DUF2517) CH58_RS06190 PF08349 Protein of unknown function (DUF1722) CH58_RS06195 PF00875 DNA photolyase CH58_RS06195 PF03441 FAD binding domain of DNA photolyase CH58_RS06200 PF02112 cAMP phosphodiesterases class-II CH58_RS06205 PF01784 NIF3 (NGG1p interacting factor 3) CH58_RS06215 PF02626 Carboxyltransferase domain, subdomain A and B CH58_RS06220 PF03746 LamB/YcsF family CH58_RS06235 PF01470 Pyroglutamyl peptidase CH58_RS06240 PF03167 Uracil DNA glycosylase superfamily CH58_RS06245 PF01228 Glycine radical CH58_RS06260 PF12796 Ankyrin repeats (3 copies) CH58_RS06265 PF00270 DEAD/DEAH box helicase CH58_RS06265 PF00271 Helicase conserved C-terminal domain CH58_RS06270 PF05175 Methyltransferase small domain CH58_RS06275 PF02910 Fumarate reductase flavoprotein C-term CH58_RS06275 PF00890 FAD binding domain CH58_RS06280 PF08281 Sigma-70, region 4 CH58_RS06280 PF04542 Sigma-70 region 2 CH58_RS06285 PF03872 Anti sigma-E protein RseA, N-terminal domain CH58_RS06285 PF03873 Anti sigma-E protein RseA, C-terminal domain CH58_RS06290 PF17188 MucB/RseB C-terminal domain CH58_RS06290 PF03888 MucB/RseB N-terminal domain CH58_RS06305 PF00679 Elongation factor G C-terminus CH58_RS06305 PF00009 Elongation factor Tu GTP binding domain CH58_RS06305 PF03144 Elongation factor Tu domain 2 CH58_RS06305 PF06421 GTP-binding protein LepA C-terminus CH58_RS06310 PF10502 Signal peptidase, peptidase S26 CH58_RS06315 PF14622 Ribonuclease-III-like CH58_RS06315 PF00035 Double-stranded RNA binding motif CH58_RS06320 PF01926 50S ribosome-binding GTPase CH58_RS06320 PF07650 KH domain CH58_RS06325 PF11967 Recombination protein O N terminal CH58_RS06325 PF02565 Recombination protein O C terminal CH58_RS06330 PF00665 Integrase core domain CH58_RS06330 PF02796 Helix-turn-helix domain of resolvase CH58_RS06335 PF01695 IstB-like ATP binding protein CH58_RS06340 PF13356 Arm DNA-binding domain CH58_RS06340 PF00589 Phage integrase family CH58_RS06345 PF01527 Transposase CH58_RS06350 PF00589 Phage integrase family CH58_RS06350 PF13356 Arm DNA-binding domain CH58_RS06360 PF12697 Alpha/beta hydrolase family CH58_RS06370 PF01402 Ribbon-helix-helix protein, copG family CH58_RS06375 PF00258 Flavodoxin CH58_RS06380 PF01475 Ferric uptake regulator family CH58_RS06390 PF03573 outer membrane porin, OprD family CH58_RS06395 PF00749 tRNA synthetases class I (E and Q), catalytic domain CH58_RS06395 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CH58_RS06400 PF01797 Transposase IS200 like CH58_RS06405 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CH58_RS06405 PF00367 phosphotransferase system, EIIB CH58_RS06405 PF02378 Phosphotransferase system, EIIC CH58_RS06410 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CH58_RS06415 PF01979 Amidohydrolase family CH58_RS06420 PF00480 ROK family CH58_RS06420 PF01047 MarR family CH58_RS06425 PF13344 Haloacid dehalogenase-like hydrolase CH58_RS06430 PF13537 Glutamine amidotransferase domain CH58_RS06430 PF00733 Asparagine synthase CH58_RS06470 PF01494 FAD binding domain CH58_RS06475 PF04055 Radical SAM superfamily CH58_RS06475 PF00919 Uncharacterized protein family UPF0004 CH58_RS06475 PF01938 TRAM domain CH58_RS06480 PF02562 PhoH-like protein CH58_RS06485 PF02130 Uncharacterized protein family UPF0054 CH58_RS06490 PF00571 CBS domain CH58_RS06490 PF03471 Transporter associated domain CH58_RS06495 PF00795 Carbon-nitrogen hydrolase CH58_RS06500 PF00497 Bacterial extracellular solute-binding proteins, family 3 CH58_RS06505 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS06510 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS06515 PF00005 ABC transporter CH58_RS06520 PF07295 Zinc-ribbon containing domain CH58_RS06525 PF00133 tRNA synthetases class I (I, L, M and V) CH58_RS06525 PF13603 Leucyl-tRNA synthetase, Domain 2 CH58_RS06525 PF08264 Anticodon-binding domain of tRNA CH58_RS06530 PF04390 Lipopolysaccharide-assembly CH58_RS06535 PF06144 DNA polymerase III, delta subunit CH58_RS06535 PF14840 Processivity clamp loader gamma complex DNA pol III C-term CH58_RS06540 PF01467 Cytidylyltransferase-like CH58_RS06550 PF02590 Predicted SPOUT methyltransferase CH58_RS06555 PF03717 Penicillin-binding Protein dimerisation domain CH58_RS06555 PF00905 Penicillin binding protein transpeptidase domain CH58_RS06560 PF01098 Cell cycle protein CH58_RS06565 PF05036 Sporulation related domain CH58_RS06565 PF03330 Lytic transglycolase CH58_RS06570 PF02796 Helix-turn-helix domain of resolvase CH58_RS06570 PF00665 Integrase core domain CH58_RS06575 PF01695 IstB-like ATP binding protein CH58_RS06580 PF07943 Penicillin-binding protein 5, C-terminal domain CH58_RS06580 PF00768 D-alanyl-D-alanine carboxypeptidase CH58_RS06585 PF04359 Protein of unknown function (DUF493) CH58_RS06590 PF03099 Biotin/lipoate A/B protein ligase family CH58_RS06595 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CH58_RS06595 PF04055 Radical SAM superfamily CH58_RS06600 PF02416 mttA/Hcf106 family CH58_RS06610 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CH58_RS06615 PF00313 'Cold-shock' DNA-binding domain CH58_RS06620 PF00313 'Cold-shock' DNA-binding domain CH58_RS06625 PF00196 Bacterial regulatory proteins, luxR family CH58_RS06650 PF00005 ABC transporter CH58_RS06650 PF00664 ABC transporter transmembrane region CH58_RS06660 PF04962 KduI/IolB family CH58_RS06665 PF01261 Xylose isomerase-like TIM barrel CH58_RS06675 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CH58_RS06675 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CH58_RS06680 PF02653 Branched-chain amino acid transport system / permease component CH58_RS06685 PF00005 ABC transporter CH58_RS06690 PF13407 Periplasmic binding protein domain CH58_RS06700 PF00205 Thiamine pyrophosphate enzyme, central domain CH58_RS06700 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CH58_RS06700 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CH58_RS06705 PF00171 Aldehyde dehydrogenase family CH58_RS06725 PF17962 Bacterial macroglobulin domain 6 CH58_RS06725 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain CH58_RS06725 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain CH58_RS06725 PF07703 Alpha-2-macroglobulin bait region domain CH58_RS06725 PF01835 MG2 domain CH58_RS06725 PF00207 Alpha-2-macroglobulin family CH58_RS06725 PF11974 Bacterial alpha-2-macroglobulin MG3 domain CH58_RS06730 PF06832 Penicillin-Binding Protein C-terminus Family CH58_RS06730 PF00912 Transglycosylase CH58_RS06730 PF00905 Penicillin binding protein transpeptidase domain CH58_RS06735 PF00872 Transposase, Mutator family CH58_RS06740 PF06832 Penicillin-Binding Protein C-terminus Family CH58_RS06740 PF00905 Penicillin binding protein transpeptidase domain CH58_RS06740 PF00912 Transglycosylase CH58_RS06745 PF13693 Winged helix-turn-helix DNA-binding CH58_RS06770 PF05638 Type VI secretion system effector, Hcp CH58_RS06785 PF03797 Autotransporter beta-domain CH58_RS06785 PF16168 Adhesin of bacterial autotransporter system, probable stalk CH58_RS06785 PF13018 Extended Signal Peptide of Type V secretion system CH58_RS06785 PF03212 Pertactin CH58_RS06795 PF08007 Cupin superfamily protein CH58_RS06815 PF14310 Fibronectin type III-like domain CH58_RS06815 PF00933 Glycosyl hydrolase family 3 N terminal domain CH58_RS06815 PF01915 Glycosyl hydrolase family 3 C-terminal domain CH58_RS06835 PF00248 Aldo/keto reductase family CH58_RS06840 PF00248 Aldo/keto reductase family CH58_RS06845 PF03466 LysR substrate binding domain CH58_RS06845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH58_RS06850 PF02796 Helix-turn-helix domain of resolvase CH58_RS06850 PF00665 Integrase core domain CH58_RS06860 PF01695 IstB-like ATP binding protein CH58_RS06875 PF00782 Dual specificity phosphatase, catalytic domain CH58_RS06880 PF12146 Serine aminopeptidase, S33 CH58_RS06880 PF12147 Putative methyltransferase CH58_RS06885 PF01553 Acyltransferase CH58_RS06895 PF01066 CDP-alcohol phosphatidyltransferase CH58_RS06940 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CH58_RS06940 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CH58_RS06950 PF01797 Transposase IS200 like CH58_RS06960 PF09190 DALR domain CH58_RS06960 PF01406 tRNA synthetases class I (C) catalytic domain CH58_RS06965 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CH58_RS06970 PF00149 Calcineurin-like phosphoesterase CH58_RS06975 PF00731 AIR carboxylase CH58_RS06980 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CH58_RS06980 PF02222 ATP-grasp domain CH58_RS06990 PF00005 ABC transporter CH58_RS06995 PF13472 GDSL-like Lipase/Acylhydrolase family CH58_RS07000 PF00106 short chain dehydrogenase CH58_RS07005 PF00085 Thioredoxin CH58_RS07010 PF01145 SPFH domain / Band 7 family CH58_RS07010 PF16200 C-terminal region of band_7 CH58_RS07015 PF01957 NfeD-like C-terminal, partner-binding CH58_RS07020 PF13411 MerR HTH family regulatory protein CH58_RS07025 PF00403 Heavy-metal-associated domain CH58_RS07030 PF01963 TraB family CH58_RS07035 PF04073 Aminoacyl-tRNA editing domain CH58_RS07050 PF02872 5'-nucleotidase, C-terminal domain CH58_RS07050 PF00149 Calcineurin-like phosphoesterase CH58_RS07055 PF00149 Calcineurin-like phosphoesterase CH58_RS07055 PF02872 5'-nucleotidase, C-terminal domain CH58_RS07060 PF00149 Calcineurin-like phosphoesterase CH58_RS07060 PF02872 5'-nucleotidase, C-terminal domain CH58_RS07065 PF07690 Major Facilitator Superfamily CH58_RS07070 PF00999 Sodium/hydrogen exchanger family CH58_RS07070 PF02254 TrkA-N domain CH58_RS07075 PF00294 pfkB family carbohydrate kinase CH58_RS07080 PF02706 Chain length determinant protein CH58_RS07085 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CH58_RS07085 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CH58_RS07085 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CH58_RS07085 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CH58_RS07090 PF00535 Glycosyl transferase family 2 CH58_RS07095 PF00483 Nucleotidyl transferase CH58_RS07095 PF01050 Mannose-6-phosphate isomerase CH58_RS07100 PF01370 NAD dependent epimerase/dehydratase family CH58_RS07110 PF00534 Glycosyl transferases group 1 CH58_RS07110 PF13439 Glycosyltransferase Family 4 CH58_RS07140 PF01370 NAD dependent epimerase/dehydratase family CH58_RS07145 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CH58_RS07150 PF16363 GDP-mannose 4,6 dehydratase CH58_RS07155 PF16363 GDP-mannose 4,6 dehydratase CH58_RS07160 PF00483 Nucleotidyl transferase CH58_RS07165 PF00970 Oxidoreductase FAD-binding domain CH58_RS07165 PF00111 2Fe-2S iron-sulfur cluster binding domain CH58_RS07165 PF00175 Oxidoreductase NAD-binding domain CH58_RS07170 PF00762 Ferrochelatase CH58_RS07175 PF05191 Adenylate kinase, active site lid CH58_RS07180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH58_RS07180 PF00183 Hsp90 protein CH58_RS07185 PF02132 RecR protein CH58_RS07185 PF13662 Toprim domain CH58_RS07190 PF02575 YbaB/EbfC DNA-binding family CH58_RS07195 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CH58_RS07195 PF12170 DNA polymerase III tau subunit V interacting with alpha CH58_RS07195 PF12169 DNA polymerase III subunits gamma and tau domain III CH58_RS07200 PF00156 Phosphoribosyl transferase domain CH58_RS07215 PF10689 Protein of unknown function (DUF2496) CH58_RS07220 PF12795 Mechanosensitive ion channel porin domain CH58_RS07220 PF12794 Mechanosensitive ion channel inner membrane domain 1 CH58_RS07220 PF00924 Mechanosensitive ion channel CH58_RS07230 PF01695 IstB-like ATP binding protein CH58_RS07235 PF12794 Mechanosensitive ion channel inner membrane domain 1 CH58_RS07235 PF12795 Mechanosensitive ion channel porin domain CH58_RS07235 PF00924 Mechanosensitive ion channel CH58_RS07240 PF02635 DsrE/DsrF-like family CH58_RS07245 PF00440 Bacterial regulatory proteins, tetR family CH58_RS07245 PF08361 MAATS-type transcriptional repressor, C-terminal region CH58_RS07250 PF00529 HlyD membrane-fusion protein of T1SS CH58_RS07250 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CH58_RS07255 PF00873 AcrB/AcrD/AcrF family CH58_RS07260 PF01197 Ribosomal protein L31 CH58_RS07265 PF00444 Ribosomal protein L36 CH58_RS07275 PF10757 Biofilm formation regulator YbaJ CH58_RS07280 PF05321 Haemolysin expression modulating protein CH58_RS07285 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CH58_RS07290 PF09619 Type III secretion system lipoprotein chaperone (YscW) CH58_RS07300 PF00909 Ammonium Transporter Family CH58_RS07305 PF00543 Nitrogen regulatory protein P-II CH58_RS07310 PF00664 ABC transporter transmembrane region CH58_RS07310 PF00005 ABC transporter CH58_RS07315 PF00005 ABC transporter CH58_RS07315 PF00664 ABC transporter transmembrane region CH58_RS07320 PF13404 AsnC-type helix-turn-helix domain CH58_RS07320 PF01037 Lrp/AsnC ligand binding domain CH58_RS07325 PF00291 Pyridoxal-phosphate dependent enzyme CH58_RS07335 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CH58_RS07335 PF12793 Sugar transport-related sRNA regulator N-term CH58_RS07340 PF06508 Queuosine biosynthesis protein QueC CH58_RS07355 PF13145 PPIC-type PPIASE domain CH58_RS07360 PF00216 Bacterial DNA-binding protein CH58_RS07365 PF05362 Lon protease (S16) C-terminal proteolytic domain CH58_RS07365 PF02190 ATP-dependent protease La (LON) substrate-binding domain CH58_RS07365 PF00004 ATPase family associated with various cellular activities (AAA) CH58_RS07370 PF07724 AAA domain (Cdc48 subfamily) CH58_RS07370 PF06689 ClpX C4-type zinc finger CH58_RS07370 PF10431 C-terminal, D2-small domain, of ClpB protein CH58_RS07375 PF00574 Clp protease CH58_RS07380 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CH58_RS07380 PF05698 Bacterial trigger factor protein (TF) C-terminus CH58_RS07380 PF05697 Bacterial trigger factor protein (TF) CH58_RS07390 PF01722 BolA-like protein CH58_RS07395 PF08139 Prokaryotic membrane lipoprotein lipid attachment site CH58_RS07395 PF03923 Uncharacterized lipoprotein CH58_RS07400 PF07690 Major Facilitator Superfamily CH58_RS07405 PF03502 Nucleoside-specific channel-forming protein, Tsx CH58_RS07410 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CH58_RS07410 PF06481 COX Aromatic Rich Motif CH58_RS07415 PF00115 Cytochrome C and Quinol oxidase polypeptide I CH58_RS07420 PF00510 Cytochrome c oxidase subunit III CH58_RS07425 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CH58_RS07430 PF01040 UbiA prenyltransferase family CH58_RS07435 PF07690 Major Facilitator Superfamily CH58_RS07440 PF04461 Protein of unknown function (DUF520) CH58_RS07445 PF08546 Ketopantoate reductase PanE/ApbA C terminal CH58_RS07445 PF02558 Ketopantoate reductase PanE/ApbA CH58_RS07450 PF01965 DJ-1/PfpI family CH58_RS07455 PF02568 Thiamine biosynthesis protein (ThiI) CH58_RS07455 PF02926 THUMP domain CH58_RS07465 PF02609 Exonuclease VII small subunit CH58_RS07470 PF00348 Polyprenyl synthetase CH58_RS07475 PF02780 Transketolase, C-terminal domain CH58_RS07475 PF02779 Transketolase, pyrimidine binding domain CH58_RS07475 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CH58_RS07480 PF01797 Transposase IS200 like CH58_RS07490 PF04608 Phosphatidylglycerophosphatase A CH58_RS07495 PF02769 AIR synthase related protein, C-terminal domain CH58_RS07495 PF00586 AIR synthase related protein, N-terminal domain CH58_RS07500 PF01029 NusB family CH58_RS07505 PF00885 6,7-dimethyl-8-ribityllumazine synthase CH58_RS07510 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CH58_RS07510 PF01872 RibD C-terminal domain CH58_RS07515 PF03477 ATP cone domain CH58_RS07530 PF01797 Transposase IS200 like CH58_RS07540 PF01797 Transposase IS200 like CH58_RS07545 PF07549 SecD/SecF GG Motif CH58_RS07545 PF02355 Protein export membrane protein CH58_RS07550 PF02355 Protein export membrane protein CH58_RS07550 PF13721 SecD export protein N-terminal TM region CH58_RS07550 PF07549 SecD/SecF GG Motif CH58_RS07555 PF02699 Preprotein translocase subunit CH58_RS07560 PF01702 Queuine tRNA-ribosyltransferase CH58_RS07565 PF02547 Queuosine biosynthesis protein CH58_RS07570 PF04336 Acyl carrier protein phosphodiesterase CH58_RS07575 PF10417 C-terminal domain of 1-Cys peroxiredoxin CH58_RS07575 PF00578 AhpC/TSA family CH58_RS07600 PF00128 Alpha amylase, catalytic domain CH58_RS07600 PF02903 Alpha amylase, N-terminal ig-like domain CH58_RS07605 PF00324 Amino acid permease CH58_RS07610 PF05525 Branched-chain amino acid transport protein CH58_RS07615 PF12849 PBP superfamily domain CH58_RS07620 PF11808 Phosphate regulon sensor protein PhoR CH58_RS07620 PF00512 His Kinase A (phospho-acceptor) domain CH58_RS07620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH58_RS07620 PF00989 PAS fold CH58_RS07625 PF00486 Transcriptional regulatory protein, C terminal CH58_RS07625 PF00072 Response regulator receiver domain CH58_RS07635 PF00149 Calcineurin-like phosphoesterase CH58_RS07635 PF12320 Type 5 capsule protein repressor C-terminal domain CH58_RS07640 PF13476 AAA domain CH58_RS07645 PF00665 Integrase core domain CH58_RS07645 PF02796 Helix-turn-helix domain of resolvase CH58_RS07650 PF01695 IstB-like ATP binding protein CH58_RS07655 PF01695 IstB-like ATP binding protein CH58_RS07660 PF13476 AAA domain CH58_RS07665 PF00480 ROK family CH58_RS07670 PF04381 Putative exonuclease, RdgC CH58_RS07675 PF06865 Pyrimidine/purine nucleoside phosphorylase CH58_RS07685 PF01202 Shikimate kinase CH58_RS07700 PF08241 Methyltransferase domain CH58_RS07710 PF07238 PilZ domain CH58_RS07710 PF07317 Flagellar regulator YcgR CH58_RS07715 PF00171 Aldehyde dehydrogenase family CH58_RS07720 PF00696 Amino acid kinase family CH58_RS07720 PF01472 PUA domain CH58_RS07725 PF07417 Sigma factor-binding transcriptional regulator Crl CH58_RS07730 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) CH58_RS07735 PF00156 Phosphoribosyl transferase domain CH58_RS07760 PF07687 Peptidase dimerisation domain CH58_RS07760 PF01546 Peptidase family M20/M25/M40 CH58_RS07765 PF00817 impB/mucB/samB family CH58_RS07765 PF11798 IMS family HHH motif CH58_RS07765 PF11799 impB/mucB/samB family C-terminal domain CH58_RS07770 PF03009 Glycerophosphoryl diester phosphodiesterase family CH58_RS07780 PF02424 ApbE family CH58_RS07785 PF00175 Oxidoreductase NAD-binding domain CH58_RS07785 PF00111 2Fe-2S iron-sulfur cluster binding domain CH58_RS07785 PF00970 Oxidoreductase FAD-binding domain CH58_RS07790 PF02508 Rnf-Nqr subunit, membrane protein CH58_RS07795 PF02508 Rnf-Nqr subunit, membrane protein CH58_RS07800 PF04205 FMN-binding domain CH58_RS07805 PF03116 NQR2, RnfD, RnfE family CH58_RS07810 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) CH58_RS07810 PF11973 NQRA C-terminal domain CH58_RS07815 PF03734 L,D-transpeptidase catalytic domain CH58_RS07820 PF13230 Glutamine amidotransferases class-II CH58_RS07825 PF13580 SIS domain CH58_RS07830 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CH58_RS07830 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CH58_RS07830 PF09317 Domain of unknown function (DUF1974) CH58_RS07840 PF18071 HMW1C N-terminal CH58_RS07840 PF18254 HMW1 domain 2 CH58_RS07845 PF05860 haemagglutination activity domain CH58_RS07850 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CH58_RS07850 PF08479 POTRA domain, ShlB-type CH58_RS07855 PF07687 Peptidase dimerisation domain CH58_RS07855 PF01546 Peptidase family M20/M25/M40 CH58_RS07860 PF00266 Aminotransferase class-V CH58_RS07865 PF02796 Helix-turn-helix domain of resolvase CH58_RS07865 PF00665 Integrase core domain CH58_RS07870 PF01695 IstB-like ATP binding protein CH58_RS07875 PF00266 Aminotransferase class-V CH58_RS07880 PF00005 ABC transporter CH58_RS07885 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS07890 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS07895 PF00497 Bacterial extracellular solute-binding proteins, family 3 CH58_RS07915 PF01425 Amidase CH58_RS07925 PF07690 Major Facilitator Superfamily CH58_RS07930 PF03591 AzlC protein CH58_RS07935 PF05437 Branched-chain amino acid transport protein (AzlD) CH58_RS07940 PF01047 MarR family CH58_RS07945 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CH58_RS07945 PF00529 HlyD membrane-fusion protein of T1SS CH58_RS07950 PF07690 Major Facilitator Superfamily CH58_RS07955 PF08032 RNA 2'-O ribose methyltransferase substrate binding CH58_RS07955 PF00588 SpoU rRNA Methylase family CH58_RS07960 PF00085 Thioredoxin CH58_RS07965 PF03942 DTW domain CH58_RS07970 PF13607 Succinyl-CoA ligase like flavodoxin domain CH58_RS07970 PF13380 CoA binding domain CH58_RS07970 PF00583 Acetyltransferase (GNAT) family CH58_RS07975 PF13091 PLD-like domain CH58_RS07980 PF10043 Predicted periplasmic lipoprotein (DUF2279) CH58_RS08020 PF10431 C-terminal, D2-small domain, of ClpB protein CH58_RS08020 PF02861 Clp amino terminal domain, pathogenicity island component CH58_RS08020 PF17871 AAA lid domain CH58_RS08020 PF07724 AAA domain (Cdc48 subfamily) CH58_RS08020 PF00004 ATPase family associated with various cellular activities (AAA) CH58_RS08025 PF02578 Multi-copper polyphenol oxidoreductase laccase CH58_RS08030 PF00849 RNA pseudouridylate synthase CH58_RS08030 PF01479 S4 domain CH58_RS08035 PF13525 Outer membrane lipoprotein CH58_RS08040 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CH58_RS08045 PF01797 Transposase IS200 like CH58_RS08050 PF01797 Transposase IS200 like CH58_RS08055 PF01797 Transposase IS200 like CH58_RS08065 PF00800 Prephenate dehydratase CH58_RS08065 PF01817 Chorismate mutase type II CH58_RS08075 PF02796 Helix-turn-helix domain of resolvase CH58_RS08075 PF00665 Integrase core domain CH58_RS08080 PF01695 IstB-like ATP binding protein CH58_RS08085 PF10414 Sirohaem synthase dimerisation region CH58_RS08085 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CH58_RS08085 PF14824 Sirohaem biosynthesis protein central CH58_RS08090 PF01507 Phosphoadenosine phosphosulfate reductase family CH58_RS08095 PF00009 Elongation factor Tu GTP binding domain CH58_RS08105 PF12084 Protein of unknown function (DUF3561) CH58_RS08110 PF04977 Septum formation initiator CH58_RS08115 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CH58_RS08120 PF02542 YgbB family CH58_RS08125 PF01142 tRNA pseudouridine synthase D (TruD) CH58_RS08130 PF01975 Survival protein SurE CH58_RS08140 PF01551 Peptidase family M23 CH58_RS08140 PF01476 LysM domain CH58_RS08145 PF00140 Sigma-70 factor, region 1.2 CH58_RS08145 PF04545 Sigma-70, region 4 CH58_RS08145 PF04539 Sigma-70 region 3 CH58_RS08145 PF04542 Sigma-70 region 2 CH58_RS08150 PF05188 MutS domain II CH58_RS08150 PF05192 MutS domain III CH58_RS08150 PF01624 MutS domain I CH58_RS08150 PF00488 MutS domain V CH58_RS08150 PF05190 MutS family domain IV CH58_RS08160 PF02502 Ribose/Galactose Isomerase CH58_RS08165 PF08240 Alcohol dehydrogenase GroES-like domain CH58_RS08165 PF00107 Zinc-binding dehydrogenase CH58_RS08175 PF02733 Dak1 domain CH58_RS08180 PF02734 DAK2 domain CH58_RS08185 PF04198 Putative sugar-binding domain CH58_RS08185 PF13936 Helix-turn-helix domain CH58_RS08190 PF02040 Arsenical pump membrane protein CH58_RS08195 PF01022 Bacterial regulatory protein, arsR family CH58_RS08210 PF00497 Bacterial extracellular solute-binding proteins, family 3 CH58_RS08215 PF03150 Di-haem cytochrome c peroxidase CH58_RS08215 PF00034 Cytochrome c CH58_RS08215 PF14376 Haem-binding domain CH58_RS08225 PF00593 TonB dependent receptor CH58_RS08225 PF07715 TonB-dependent Receptor Plug Domain CH58_RS08245 PF00557 Metallopeptidase family M24 CH58_RS08255 PF05683 Fumarase C-terminus CH58_RS08255 PF05681 Fumarate hydratase (Fumerase) CH58_RS08260 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CH58_RS08260 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CH58_RS08265 PF01261 Xylose isomerase-like TIM barrel CH58_RS08270 PF02653 Branched-chain amino acid transport system / permease component CH58_RS08275 PF02653 Branched-chain amino acid transport system / permease component CH58_RS08280 PF00005 ABC transporter CH58_RS08285 PF01797 Transposase IS200 like CH58_RS08295 PF00455 DeoR C terminal sensor domain CH58_RS08295 PF08220 DeoR-like helix-turn-helix domain CH58_RS08300 PF00596 Class II Aldolase and Adducin N-terminal domain CH58_RS08305 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CH58_RS08305 PF01568 Molydopterin dinucleotide binding domain CH58_RS08305 PF00384 Molybdopterin oxidoreductase CH58_RS08310 PF12800 4Fe-4S binding domain CH58_RS08310 PF13247 4Fe-4S dicluster domain CH58_RS08315 PF04976 DMSO reductase anchor subunit (DmsC) CH58_RS08320 PF02613 Nitrate reductase delta subunit CH58_RS08325 PF01292 Prokaryotic cytochrome b561 CH58_RS08330 PF07361 Cytochrome b562 CH58_RS08335 PF00141 Peroxidase CH58_RS08340 PF13407 Periplasmic binding protein domain CH58_RS08350 PF00005 ABC transporter CH58_RS08355 PF02653 Branched-chain amino acid transport system / permease component CH58_RS08360 PF00456 Transketolase, thiamine diphosphate binding domain CH58_RS08365 PF02779 Transketolase, pyrimidine binding domain CH58_RS08365 PF02780 Transketolase, C-terminal domain CH58_RS08370 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CH58_RS08370 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CH58_RS08385 PF07690 Major Facilitator Superfamily CH58_RS08390 PF02464 Competence-damaged protein CH58_RS08395 PF00154 recA bacterial DNA recombination protein CH58_RS08400 PF02631 RecX family CH58_RS08405 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CH58_RS08405 PF01411 tRNA synthetases class II (A) CH58_RS08405 PF02272 DHHA1 domain CH58_RS08410 PF02599 Global regulator protein family CH58_RS08435 PF13419 Haloacid dehalogenase-like hydrolase CH58_RS08440 PF09335 SNARE associated Golgi protein CH58_RS08445 PF04262 Glutamate-cysteine ligase CH58_RS08450 PF02664 S-Ribosylhomocysteinase (LuxS) CH58_RS08460 PF01797 Transposase IS200 like CH58_RS08465 PF01595 Cyclin M transmembrane N-terminal domain CH58_RS08465 PF03471 Transporter associated domain CH58_RS08465 PF00571 CBS domain CH58_RS08470 PF01578 Cytochrome C assembly protein CH58_RS08475 PF02881 SRP54-type protein, helical bundle domain CH58_RS08475 PF02978 Signal peptide binding domain CH58_RS08475 PF00448 SRP54-type protein, GTPase domain CH58_RS08480 PF00886 Ribosomal protein S16 CH58_RS08485 PF05239 PRC-barrel domain CH58_RS08485 PF01782 RimM N-terminal domain CH58_RS08490 PF01746 tRNA (Guanine-1)-methyltransferase CH58_RS08495 PF01245 Ribosomal protein L19 CH58_RS08510 PF04338 Protein of unknown function, DUF481 CH58_RS08515 PF03605 Anaerobic c4-dicarboxylate membrane transporter CH58_RS08520 PF03605 Anaerobic c4-dicarboxylate membrane transporter CH58_RS08525 PF03605 Anaerobic c4-dicarboxylate membrane transporter CH58_RS08530 PF00072 Response regulator receiver domain CH58_RS08530 PF04397 LytTr DNA-binding domain CH58_RS08535 PF00793 DAHP synthetase I family CH58_RS08540 PF01817 Chorismate mutase type II CH58_RS08540 PF02153 Prephenate dehydrogenase CH58_RS08545 PF01817 Chorismate mutase type II CH58_RS08545 PF00800 Prephenate dehydratase CH58_RS08550 PF01695 IstB-like ATP binding protein CH58_RS08555 PF01695 IstB-like ATP binding protein CH58_RS08565 PF00665 Integrase core domain CH58_RS08565 PF02796 Helix-turn-helix domain of resolvase CH58_RS08570 PF10414 Sirohaem synthase dimerisation region CH58_RS08570 PF14824 Sirohaem biosynthesis protein central CH58_RS08570 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CH58_RS08595 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CH58_RS08595 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CH58_RS08600 PF00667 FAD binding domain CH58_RS08600 PF00175 Oxidoreductase NAD-binding domain CH58_RS08600 PF00258 Flavodoxin CH58_RS08605 PF01242 6-pyruvoyl tetrahydropterin synthase CH58_RS08610 PF04055 Radical SAM superfamily CH58_RS08615 PF00080 Copper/zinc superoxide dismutase (SODC) CH58_RS08620 PF03952 Enolase, N-terminal domain CH58_RS08620 PF00113 Enolase, C-terminal TIM barrel domain CH58_RS08625 PF00117 Glutamine amidotransferase class-I CH58_RS08625 PF06418 CTP synthase N-terminus CH58_RS08630 PF03819 MazG nucleotide pyrophosphohydrolase domain CH58_RS08640 PF13291 ACT domain CH58_RS08640 PF02824 TGS domain CH58_RS08640 PF04607 Region found in RelA / SpoT proteins CH58_RS08645 PF01938 TRAM domain CH58_RS08645 PF05958 tRNA (Uracil-5-)-methyltransferase CH58_RS08650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH58_RS08650 PF00512 His Kinase A (phospho-acceptor) domain CH58_RS08650 PF00672 HAMP domain CH58_RS08650 PF01627 Hpt domain CH58_RS08650 PF00072 Response regulator receiver domain CH58_RS08650 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CH58_RS08655 PF00595 PDZ domain CH58_RS08660 PF13286 Phosphohydrolase-associated domain CH58_RS08660 PF01966 HD domain CH58_RS08665 PF01048 Phosphorylase superfamily CH58_RS08670 PF01497 Periplasmic binding protein CH58_RS08675 PF03458 UPF0126 domain CH58_RS08680 PF01521 Iron-sulphur cluster biosynthesis CH58_RS08685 PF00654 Voltage gated chloride channel CH58_RS08690 PF00202 Aminotransferase class-III CH58_RS08695 PF01032 FecCD transport family CH58_RS08700 PF01497 Periplasmic binding protein CH58_RS08710 PF00005 ABC transporter CH58_RS08715 PF00905 Penicillin binding protein transpeptidase domain CH58_RS08715 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal CH58_RS08715 PF00912 Transglycosylase CH58_RS08715 PF14814 Bifunctional transglycosylase second domain CH58_RS08720 PF00271 Helicase conserved C-terminal domain CH58_RS08720 PF08482 ATP-dependent helicase C-terminal CH58_RS08720 PF04408 Helicase associated domain (HA2) CH58_RS08720 PF00270 DEAD/DEAH box helicase CH58_RS08725 PF02834 LigT like Phosphoesterase CH58_RS08730 PF17746 SfsA N-terminal OB domain CH58_RS08730 PF03749 Sugar fermentation stimulation protein RE domain CH58_RS08735 PF01258 Prokaryotic dksA/traR C4-type zinc finger CH58_RS08740 PF00749 tRNA synthetases class I (E and Q), catalytic domain CH58_RS08745 PF12627 Probable RNA and SrmB- binding site of polymerase A CH58_RS08745 PF01743 Poly A polymerase head domain CH58_RS08745 PF12626 Polymerase A arginine-rich C-terminus CH58_RS08750 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CH58_RS08755 PF02548 Ketopantoate hydroxymethyltransferase CH58_RS08760 PF02569 Pantoate-beta-alanine ligase CH58_RS08765 PF02261 Aspartate decarboxylase CH58_RS08775 PF01061 ABC-2 type transporter CH58_RS08780 PF00005 ABC transporter CH58_RS08785 PF00484 Carbonic anhydrase CH58_RS08790 PF00156 Phosphoribosyl transferase domain CH58_RS08795 PF10518 TAT (twin-arginine translocation) pathway signal sequence CH58_RS08795 PF07732 Multicopper oxidase CH58_RS08795 PF07731 Multicopper oxidase CH58_RS08795 PF00394 Multicopper oxidase CH58_RS08800 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) CH58_RS08805 PF17284 Spermidine synthase tetramerisation domain CH58_RS08810 PF02675 S-adenosylmethionine decarboxylase CH58_RS08815 PF00892 EamA-like transporter family CH58_RS08820 PF06062 Uncharacterised protein family (UPF0231) CH58_RS08825 PF06434 Aconitate hydratase 2 N-terminus CH58_RS08825 PF11791 Aconitate B N-terminal domain CH58_RS08825 PF00330 Aconitase family (aconitate hydratase) CH58_RS08830 PF01797 Transposase IS200 like CH58_RS08840 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CH58_RS08840 PF07992 Pyridine nucleotide-disulphide oxidoreductase CH58_RS08845 PF00364 Biotin-requiring enzyme CH58_RS08845 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CH58_RS08845 PF02817 e3 binding domain CH58_RS08850 PF17831 Pyruvate dehydrogenase E1 component middle domain CH58_RS08850 PF00456 Transketolase, thiamine diphosphate binding domain CH58_RS08855 PF07729 FCD domain CH58_RS08855 PF00392 Bacterial regulatory proteins, gntR family CH58_RS08860 PF00324 Amino acid permease CH58_RS08865 PF17113 Regulatory signalling modulator protein AmpE CH58_RS08870 PF01510 N-acetylmuramoyl-L-alanine amidase CH58_RS08875 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CH58_RS08875 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CH58_RS08880 PF07963 Prokaryotic N-terminal methylation motif CH58_RS08885 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CH58_RS08885 PF00437 Type II/IV secretion system protein CH58_RS08890 PF00482 Type II secretion system (T2SS), protein F CH58_RS08895 PF00478 IMP dehydrogenase / GMP reductase domain CH58_RS08905 PF01121 Dephospho-CoA kinase CH58_RS08910 PF07072 Cell division protein CH58_RS08915 PF03884 DNA gyrase inhibitor YacG CH58_RS08925 PF00665 Integrase core domain CH58_RS08925 PF02796 Helix-turn-helix domain of resolvase CH58_RS08930 PF01695 IstB-like ATP binding protein CH58_RS08935 PF08676 MutL C terminal dimerisation domain CH58_RS08935 PF01119 DNA mismatch repair protein, C-terminal domain CH58_RS08945 PF00589 Phage integrase family CH58_RS08945 PF13356 Arm DNA-binding domain CH58_RS08955 PF03739 Lipopolysaccharide export system permease LptF/LptG CH58_RS08960 PF03739 Lipopolysaccharide export system permease LptF/LptG CH58_RS08965 PF00883 Cytosol aminopeptidase family, catalytic domain CH58_RS08965 PF02789 Cytosol aminopeptidase family, N-terminal domain CH58_RS08970 PF04364 DNA polymerase III chi subunit, HolC CH58_RS08975 PF08264 Anticodon-binding domain of tRNA CH58_RS08975 PF10458 Valyl tRNA synthetase tRNA binding arm CH58_RS08975 PF00133 tRNA synthetases class I (I, L, M and V) CH58_RS08980 PF00583 Acetyltransferase (GNAT) family CH58_RS08985 PF06877 Regulator of ribonuclease activity B CH58_RS08990 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CH58_RS08990 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CH58_RS08995 PF04074 YhcH/YjgK/YiaL CH58_RS09005 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS09010 PF12911 N-terminal TM domain of oligopeptide transport permease C CH58_RS09010 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS09015 PF00005 ABC transporter CH58_RS09015 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CH58_RS09020 PF00005 ABC transporter CH58_RS09020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CH58_RS09025 PF03477 ATP cone domain CH58_RS09025 PF13597 Anaerobic ribonucleoside-triphosphate reductase CH58_RS09035 PF00392 Bacterial regulatory proteins, gntR family CH58_RS09035 PF07702 UTRA domain CH58_RS09040 PF06754 Phosphonate metabolism protein PhnG CH58_RS09045 PF05845 Bacterial phosphonate metabolism protein (PhnH) CH58_RS09050 PF05861 Bacterial phosphonate metabolism protein (PhnI) CH58_RS09055 PF06007 Phosphonate metabolism protein PhnJ CH58_RS09060 PF00005 ABC transporter CH58_RS09065 PF00005 ABC transporter CH58_RS09070 PF07969 Amidohydrolase family CH58_RS09080 PF12706 Beta-lactamase superfamily domain CH58_RS09085 PF13460 NAD(P)H-binding CH58_RS09100 PF03459 TOBE domain CH58_RS09100 PF00005 ABC transporter CH58_RS09100 PF17912 MalK OB fold domain CH58_RS09105 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS09110 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS09115 PF13416 Bacterial extracellular solute-binding protein CH58_RS09130 PF01541 GIY-YIG catalytic domain CH58_RS09135 PF13508 Acetyltransferase (GNAT) domain CH58_RS09140 PF02036 SCP-2 sterol transfer family CH58_RS09150 PF01136 Peptidase family U32 CH58_RS09155 PF01136 Peptidase family U32 CH58_RS09160 PF02321 Outer membrane efflux protein CH58_RS09160 PF08139 Prokaryotic membrane lipoprotein lipid attachment site CH58_RS09165 PF00873 AcrB/AcrD/AcrF family CH58_RS09170 PF00529 HlyD membrane-fusion protein of T1SS CH58_RS09170 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CH58_RS09175 PF00296 Luciferase-like monooxygenase CH58_RS09180 PF01381 Helix-turn-helix CH58_RS09195 PF03880 DbpA RNA binding domain CH58_RS09195 PF00270 DEAD/DEAH box helicase CH58_RS09195 PF12343 Cold shock protein DEAD box A CH58_RS09195 PF00271 Helicase conserved C-terminal domain CH58_RS09200 PF07719 Tetratricopeptide repeat CH58_RS09200 PF13181 Tetratricopeptide repeat CH58_RS09205 PF00575 S1 RNA binding domain CH58_RS09205 PF03725 3' exoribonuclease family, domain 2 CH58_RS09205 PF01138 3' exoribonuclease family, domain 1 CH58_RS09205 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CH58_RS09205 PF00013 KH domain CH58_RS09210 PF13333 Integrase core domain CH58_RS09210 PF00665 Integrase core domain CH58_RS09210 PF13276 HTH-like domain CH58_RS09220 PF02423 Ornithine cyclodeaminase/mu-crystallin family CH58_RS09225 PF00291 Pyridoxal-phosphate dependent enzyme CH58_RS09225 PF13291 ACT domain CH58_RS09230 PF07676 WD40-like Beta Propeller Repeat CH58_RS09230 PF12566 Protein of unknown function (DUF3748) CH58_RS09235 PF07676 WD40-like Beta Propeller Repeat CH58_RS09235 PF12566 Protein of unknown function (DUF3748) CH58_RS09240 PF07119 Protein of unknown function (DUF1375) CH58_RS09245 PF00011 Hsp20/alpha crystallin family CH58_RS09250 PF00011 Hsp20/alpha crystallin family CH58_RS09255 PF06826 Predicted Permease Membrane Region CH58_RS09255 PF02080 TrkA-C domain CH58_RS09260 PF00155 Aminotransferase class I and II CH58_RS09270 PF00128 Alpha amylase, catalytic domain CH58_RS09275 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CH58_RS09275 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CH58_RS09285 PF00691 OmpA family CH58_RS09285 PF13488 Glycine zipper CH58_RS09295 PF03352 Methyladenine glycosylase CH58_RS09300 PF02091 Glycyl-tRNA synthetase alpha subunit CH58_RS09305 PF02092 Glycyl-tRNA synthetase beta subunit CH58_RS09305 PF05746 DALR anticodon binding domain CH58_RS09310 PF11254 Protein of unknown function (DUF3053) CH58_RS09315 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CH58_RS09315 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CH58_RS09315 PF02378 Phosphotransferase system, EIIC CH58_RS09320 PF01232 Mannitol dehydrogenase Rossmann domain CH58_RS09320 PF08125 Mannitol dehydrogenase C-terminal domain CH58_RS09325 PF05068 Mannitol repressor CH58_RS09330 PF10928 Protein of unknown function (DUF2810) CH58_RS09345 PF02203 Tar ligand binding domain homologue CH58_RS09345 PF00672 HAMP domain CH58_RS09345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CH58_RS09350 PF01695 IstB-like ATP binding protein CH58_RS09355 PF02796 Helix-turn-helix domain of resolvase CH58_RS09355 PF00665 Integrase core domain CH58_RS09365 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CH58_RS09365 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CH58_RS09370 PF02634 FdhD/NarQ family CH58_RS09375 PF00384 Molybdopterin oxidoreductase CH58_RS09375 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CH58_RS09375 PF01568 Molydopterin dinucleotide binding domain CH58_RS09380 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CH58_RS09380 PF01568 Molydopterin dinucleotide binding domain CH58_RS09380 PF00384 Molybdopterin oxidoreductase CH58_RS09385 PF13247 4Fe-4S dicluster domain CH58_RS09385 PF09163 Formate dehydrogenase N, transmembrane CH58_RS09390 PF01292 Prokaryotic cytochrome b561 CH58_RS09395 PF04216 Protein involved in formate dehydrogenase formation CH58_RS09400 PF12390 Selenocysteine synthase N terminal CH58_RS09400 PF03841 L-seryl-tRNA selenium transferase CH58_RS09405 PF09106 Elongation factor SelB, winged helix CH58_RS09405 PF03144 Elongation factor Tu domain 2 CH58_RS09405 PF09107 Elongation factor SelB, winged helix CH58_RS09405 PF00009 Elongation factor Tu GTP binding domain CH58_RS09410 PF01526 Tn3 transposase DDE domain CH58_RS09410 PF13700 Domain of unknown function (DUF4158) CH58_RS09435 PF07690 Major Facilitator Superfamily CH58_RS09440 PF00665 Integrase core domain CH58_RS09440 PF13276 HTH-like domain CH58_RS09440 PF13333 Integrase core domain CH58_RS09480 PF13677 Membrane MotB of proton-channel complex MotA/MotB CH58_RS09480 PF00691 OmpA family CH58_RS09485 PF01618 MotA/TolQ/ExbB proton channel family CH58_RS09490 PF04545 Sigma-70, region 4 CH58_RS09490 PF04542 Sigma-70 region 2 CH58_RS09515 PF07196 Flagellin hook IN motif CH58_RS09515 PF07195 Flagellar hook-associated protein 2 C-terminus CH58_RS09515 PF02465 Flagellar hook-associated protein 2 N-terminus CH58_RS09520 PF00700 Bacterial flagellin C-terminal helical region CH58_RS09520 PF00669 Bacterial flagellin N-terminal helical region CH58_RS09525 PF00669 Bacterial flagellin N-terminal helical region CH58_RS09525 PF00700 Bacterial flagellin C-terminal helical region CH58_RS09530 PF00700 Bacterial flagellin C-terminal helical region CH58_RS09530 PF00669 Bacterial flagellin N-terminal helical region CH58_RS09535 PF00486 Transcriptional regulatory protein, C terminal CH58_RS09535 PF18500 CadC C-terminal domain 1 CH58_RS09555 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CH58_RS09555 PF00460 Flagella basal body rod protein CH58_RS09565 PF02119 Flagellar P-ring protein CH58_RS09570 PF02107 Flagellar L-ring protein CH58_RS09575 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CH58_RS09575 PF00460 Flagella basal body rod protein CH58_RS09580 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CH58_RS09580 PF00460 Flagella basal body rod protein CH58_RS09585 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CH58_RS09585 PF00460 Flagella basal body rod protein CH58_RS09585 PF07559 Flagellar basal body protein FlaE CH58_RS09590 PF13861 FlgD Tudor-like domain CH58_RS09590 PF13860 FlgD Ig-like domain CH58_RS09590 PF03963 Flagellar hook capping protein - N-terminal region CH58_RS09595 PF00460 Flagella basal body rod protein CH58_RS09595 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CH58_RS09600 PF00460 Flagella basal body rod protein CH58_RS09605 PF13144 Chaperone for flagella basal body P-ring formation CH58_RS09625 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CH58_RS09625 PF18269 T3SS EscN ATPase C-terminal domain CH58_RS09640 PF00665 Integrase core domain CH58_RS09640 PF02796 Helix-turn-helix domain of resolvase CH58_RS09650 PF01695 IstB-like ATP binding protein CH58_RS09655 PF01367 5'-3' exonuclease, C-terminal SAM fold CH58_RS09655 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CH58_RS09660 PF08345 Flagellar M-ring protein C-terminal CH58_RS09660 PF01514 Secretory protein of YscJ/FliF family CH58_RS09665 PF02049 Flagellar hook-basal body complex protein FliE CH58_RS09670 PF02954 Bacterial regulatory protein, Fis family CH58_RS09670 PF00072 Response regulator receiver domain CH58_RS09670 PF00158 Sigma-54 interaction domain CH58_RS09680 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CH58_RS09685 PF00813 FliP family CH58_RS09690 PF01313 Bacterial export proteins, family 3 CH58_RS09695 PF01311 Bacterial export proteins, family 1 CH58_RS09700 PF01312 FlhB HrpN YscU SpaS Family CH58_RS09705 PF00771 FHIPEP family CH58_RS09720 PF01497 Periplasmic binding protein CH58_RS09725 PF09222 Fimbrial adhesin F17-AG, lectin domain CH58_RS09725 PF00419 Fimbrial protein CH58_RS09730 PF02753 Pili assembly chaperone PapD, C-terminal domain CH58_RS09730 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CH58_RS09735 PF13954 PapC N-terminal domain CH58_RS09735 PF00577 Outer membrane usher protein CH58_RS09735 PF13953 PapC C-terminal domain CH58_RS09740 PF01797 Transposase IS200 like CH58_RS09755 PF13629 Pilus formation protein N terminal region CH58_RS09755 PF00263 Bacterial type II and III secretion system protein CH58_RS09755 PF04972 BON domain CH58_RS09760 PF04972 BON domain CH58_RS09760 PF00263 Bacterial type II and III secretion system protein CH58_RS09760 PF13629 Pilus formation protein N terminal region CH58_RS09775 PF00437 Type II/IV secretion system protein CH58_RS09810 PF02472 Biopolymer transport protein ExbD/TolR CH58_RS09815 PF01618 MotA/TolQ/ExbB proton channel family CH58_RS09820 PF01053 Cys/Met metabolism PLP-dependent enzyme CH58_RS09830 PF12833 Helix-turn-helix domain CH58_RS09830 PF06719 AraC-type transcriptional regulator N-terminus CH58_RS09835 PF00465 Iron-containing alcohol dehydrogenase CH58_RS09845 PF00248 Aldo/keto reductase family CH58_RS09855 PF07731 Multicopper oxidase CH58_RS09855 PF07732 Multicopper oxidase CH58_RS09860 PF01553 Acyltransferase CH58_RS09865 PF03989 DNA gyrase C-terminal domain, beta-propeller CH58_RS09865 PF00521 DNA gyrase/topoisomerase IV, subunit A CH58_RS09875 PF02525 Flavodoxin-like fold CH58_RS09880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH58_RS09880 PF03466 LysR substrate binding domain CH58_RS09885 PF00204 DNA gyrase B CH58_RS09885 PF00986 DNA gyrase B subunit, carboxyl terminus CH58_RS09885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH58_RS09885 PF01751 Toprim domain CH58_RS09890 PF05728 Uncharacterised protein family (UPF0227) CH58_RS09900 PF06853 Protein of unknown function (DUF1249) CH58_RS09905 PF00293 NUDIX domain CH58_RS09910 PF02321 Outer membrane efflux protein CH58_RS09920 PF06693 Protein of unknown function (DUF1190) CH58_RS09925 PF03738 Glutathionylspermidine synthase preATP-grasp CH58_RS09930 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CH58_RS09935 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CH58_RS09945 PF04380 Membrane fusogenic activity CH58_RS09950 PF13520 Amino acid permease CH58_RS09955 PF00294 pfkB family carbohydrate kinase CH58_RS09955 PF01467 Cytidylyltransferase-like CH58_RS09960 PF08335 GlnD PII-uridylyltransferase CH58_RS09960 PF03710 Glutamate-ammonia ligase adenylyltransferase CH58_RS09965 PF01928 CYTH domain CH58_RS09970 PF08239 Bacterial SH3 domain CH58_RS09975 PF12627 Probable RNA and SrmB- binding site of polymerase A CH58_RS09975 PF01743 Poly A polymerase head domain CH58_RS09975 PF01966 HD domain CH58_RS09980 PF02673 Bacitracin resistance protein BacA CH58_RS09985 PF02152 Dihydroneopterin aldolase CH58_RS09990 PF02660 Glycerol-3-phosphate acyltransferase CH58_RS09995 PF00814 Glycoprotease family CH58_RS10000 PF01165 Ribosomal protein S21 CH58_RS10005 PF10410 DnaB-helicase binding domain of primase CH58_RS10005 PF08275 DNA primase catalytic core, N-terminal domain CH58_RS10005 PF01807 CHC2 zinc finger CH58_RS10005 PF08278 DNA primase DnaG DnaB-binding CH58_RS10010 PF03979 Sigma-70 factor, region 1.1 CH58_RS10010 PF04546 Sigma-70, non-essential region CH58_RS10010 PF04545 Sigma-70, region 4 CH58_RS10010 PF04539 Sigma-70 region 3 CH58_RS10010 PF00140 Sigma-70 factor, region 1.2 CH58_RS10010 PF04542 Sigma-70 region 2 CH58_RS10050 PF01695 IstB-like ATP binding protein CH58_RS10060 PF02796 Helix-turn-helix domain of resolvase CH58_RS10060 PF00665 Integrase core domain CH58_RS10085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH58_RS10085 PF03466 LysR substrate binding domain CH58_RS10105 PF01042 Endoribonuclease L-PSP CH58_RS10125 PF00155 Aminotransferase class I and II CH58_RS10145 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CH58_RS10145 PF00529 HlyD membrane-fusion protein of T1SS CH58_RS10150 PF04632 Fusaric acid resistance protein family CH58_RS10160 PF14310 Fibronectin type III-like domain CH58_RS10160 PF00933 Glycosyl hydrolase family 3 N terminal domain CH58_RS10160 PF01915 Glycosyl hydrolase family 3 C-terminal domain CH58_RS10170 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS10175 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS10180 PF01547 Bacterial extracellular solute-binding protein CH58_RS10185 PF00356 Bacterial regulatory proteins, lacI family CH58_RS10190 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain CH58_RS10195 PF00005 ABC transporter CH58_RS10195 PF17912 MalK OB fold domain CH58_RS10195 PF03459 TOBE domain CH58_RS10215 PF04829 Pre-toxin domain with VENN motif CH58_RS10215 PF13018 Extended Signal Peptide of Type V secretion system CH58_RS10215 PF13332 Hemagglutinin repeat CH58_RS10215 PF05860 haemagglutination activity domain CH58_RS10225 PF13332 Hemagglutinin repeat CH58_RS10225 PF04829 Pre-toxin domain with VENN motif CH58_RS10230 PF13332 Hemagglutinin repeat CH58_RS10230 PF04829 Pre-toxin domain with VENN motif CH58_RS10240 PF13332 Hemagglutinin repeat CH58_RS10240 PF04829 Pre-toxin domain with VENN motif CH58_RS10240 PF13018 Extended Signal Peptide of Type V secretion system CH58_RS10240 PF05860 haemagglutination activity domain CH58_RS10245 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CH58_RS10245 PF17287 POTRA domain CH58_RS10245 PF08479 POTRA domain, ShlB-type CH58_RS10250 PF00092 von Willebrand factor type A domain CH58_RS10255 PF02342 TerD domain CH58_RS10265 PF00092 von Willebrand factor type A domain CH58_RS10285 PF03729 Short repeat of unknown function (DUF308) CH58_RS10290 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CH58_RS10290 PF07992 Pyridine nucleotide-disulphide oxidoreductase CH58_RS10295 PF05175 Methyltransferase small domain CH58_RS10300 PF03797 Autotransporter beta-domain CH58_RS10305 PF01863 Protein of unknown function DUF45 CH58_RS10310 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CH58_RS10315 PF00375 Sodium:dicarboxylate symporter family CH58_RS10325 PF01797 Transposase IS200 like CH58_RS10330 PF10688 Bacterial inner membrane protein CH58_RS10335 PF08666 SAF domain CH58_RS10335 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CH58_RS10345 PF02614 Glucuronate isomerase CH58_RS10355 PF07690 Major Facilitator Superfamily CH58_RS10360 PF00392 Bacterial regulatory proteins, gntR family CH58_RS10360 PF07729 FCD domain CH58_RS10370 PF09335 SNARE associated Golgi protein CH58_RS10375 PF13721 SecD export protein N-terminal TM region CH58_RS10390 PF05957 Bacterial protein of unknown function (DUF883) CH58_RS10395 PF07332 Putative Actinobacterial Holin-X, holin superfamily III CH58_RS10405 PF07681 DoxX CH58_RS10410 PF13409 Glutathione S-transferase, N-terminal domain CH58_RS10415 PF02796 Helix-turn-helix domain of resolvase CH58_RS10415 PF00665 Integrase core domain CH58_RS10430 PF01695 IstB-like ATP binding protein CH58_RS10435 PF00132 Bacterial transferase hexapeptide (six repeats) CH58_RS10440 PF01488 Shikimate / quinate 5-dehydrogenase CH58_RS10440 PF08501 Shikimate dehydrogenase substrate binding domain CH58_RS10440 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CH58_RS10445 PF01300 Telomere recombination CH58_RS10450 PF01396 Topoisomerase DNA binding C4 zinc finger CH58_RS10455 PF04361 Protein of unknown function (DUF494) CH58_RS10460 PF02481 DNA recombination-mediator protein A CH58_RS10460 PF17782 DprA winged helix domain CH58_RS10465 PF01327 Polypeptide deformylase CH58_RS10470 PF00551 Formyl transferase CH58_RS10470 PF02911 Formyl transferase, C-terminal domain CH58_RS10475 PF01189 16S rRNA methyltransferase RsmB/F CH58_RS10475 PF01029 NusB family CH58_RS10480 PF02254 TrkA-N domain CH58_RS10480 PF02080 TrkA-C domain CH58_RS10485 PF01741 Large-conductance mechanosensitive channel, MscL CH58_RS10490 PF03889 Alternative ribosome-rescue factor A CH58_RS10495 PF13411 MerR HTH family regulatory protein CH58_RS10500 PF01196 Ribosomal protein L17 CH58_RS10505 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CH58_RS10505 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CH58_RS10505 PF01000 RNA polymerase Rpb3/RpoA insert domain CH58_RS10510 PF00163 Ribosomal protein S4/S9 N-terminal domain CH58_RS10510 PF01479 S4 domain CH58_RS10515 PF00411 Ribosomal protein S11 CH58_RS10520 PF00416 Ribosomal protein S13/S18 CH58_RS10525 PF00444 Ribosomal protein L36 CH58_RS10530 PF00344 SecY translocase CH58_RS10535 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CH58_RS10540 PF00327 Ribosomal protein L30p/L7e CH58_RS10545 PF00333 Ribosomal protein S5, N-terminal domain CH58_RS10545 PF03719 Ribosomal protein S5, C-terminal domain CH58_RS10550 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CH58_RS10555 PF00347 Ribosomal protein L6 CH58_RS10560 PF00410 Ribosomal protein S8 CH58_RS10565 PF00253 Ribosomal protein S14p/S29e CH58_RS10570 PF00673 ribosomal L5P family C-terminus CH58_RS10570 PF00281 Ribosomal protein L5 CH58_RS10575 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CH58_RS10575 PF00467 KOW motif CH58_RS10580 PF00238 Ribosomal protein L14p/L23e CH58_RS10585 PF00366 Ribosomal protein S17 CH58_RS10590 PF00831 Ribosomal L29 protein CH58_RS10595 PF00252 Ribosomal protein L16p/L10e CH58_RS10600 PF00189 Ribosomal protein S3, C-terminal domain CH58_RS10600 PF07650 KH domain CH58_RS10605 PF00237 Ribosomal protein L22p/L17e CH58_RS10610 PF00203 Ribosomal protein S19 CH58_RS10615 PF03947 Ribosomal Proteins L2, C-terminal domain CH58_RS10615 PF00181 Ribosomal Proteins L2, RNA binding domain CH58_RS10620 PF00276 Ribosomal protein L23 CH58_RS10625 PF00573 Ribosomal protein L4/L1 family CH58_RS10630 PF00297 Ribosomal protein L3 CH58_RS10635 PF00338 Ribosomal protein S10p/S20e CH58_RS10640 PF00210 Ferritin-like domain CH58_RS10645 PF04324 BFD-like [2Fe-2S] binding domain CH58_RS10650 PF02796 Helix-turn-helix domain of resolvase CH58_RS10650 PF00665 Integrase core domain CH58_RS10655 PF01695 IstB-like ATP binding protein CH58_RS10660 PF01797 Transposase IS200 like CH58_RS10665 PF00009 Elongation factor Tu GTP binding domain CH58_RS10665 PF03144 Elongation factor Tu domain 2 CH58_RS10665 PF03143 Elongation factor Tu C-terminal domain CH58_RS10670 PF03144 Elongation factor Tu domain 2 CH58_RS10670 PF00009 Elongation factor Tu GTP binding domain CH58_RS10670 PF03764 Elongation factor G, domain IV CH58_RS10670 PF14492 Elongation Factor G, domain II CH58_RS10670 PF00679 Elongation factor G C-terminus CH58_RS10675 PF00177 Ribosomal protein S7p/S5e CH58_RS10680 PF00164 Ribosomal protein S12/S23 CH58_RS10685 PF04077 DsrH like protein CH58_RS10690 PF02635 DsrE/DsrF-like family CH58_RS10695 PF02635 DsrE/DsrF-like family CH58_RS10700 PF13309 HTH domain CH58_RS10700 PF08348 YheO-like PAS domain CH58_RS10705 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CH58_RS10705 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CH58_RS10710 PF04102 SlyX CH58_RS10715 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CH58_RS10720 PF09526 Probable metal-binding protein (DUF2387) CH58_RS10725 PF00999 Sodium/hydrogen exchanger family CH58_RS10725 PF02254 TrkA-N domain CH58_RS10730 PF02525 Flavodoxin-like fold CH58_RS10740 PF00535 Glycosyl transferase family 2 CH58_RS10750 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CH58_RS10755 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS10760 PF00005 ABC transporter CH58_RS10765 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CH58_RS10770 PF01810 LysE type translocator CH58_RS10775 PF00561 alpha/beta hydrolase fold CH58_RS10780 PF06794 Uncharacterised protein family (UPF0270) CH58_RS10785 PF00485 Phosphoribulokinase / Uridine kinase family CH58_RS10795 PF02566 OsmC-like protein CH58_RS10800 PF00027 Cyclic nucleotide-binding domain CH58_RS10800 PF13545 Crp-like helix-turn-helix domain CH58_RS10805 PF12805 FUSC-like inner membrane protein yccS CH58_RS10810 PF00202 Aminotransferase class-III CH58_RS10815 PF00117 Glutamine amidotransferase class-I CH58_RS10820 PF05872 Bacterial protein of unknown function (DUF853) CH58_RS10825 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CH58_RS10830 PF11975 Family 4 glycosyl hydrolase C-terminal domain CH58_RS10830 PF02056 Family 4 glycosyl hydrolase CH58_RS10835 PF00356 Bacterial regulatory proteins, lacI family CH58_RS10845 PF07690 Major Facilitator Superfamily CH58_RS10850 PF07969 Amidohydrolase family CH58_RS10855 PF07992 Pyridine nucleotide-disulphide oxidoreductase CH58_RS10855 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CH58_RS10855 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CH58_RS10855 PF18267 Rubredoxin NAD+ reductase C-terminal domain CH58_RS10855 PF04324 BFD-like [2Fe-2S] binding domain CH58_RS10860 PF13806 Rieske-like [2Fe-2S] domain CH58_RS10865 PF01226 Formate/nitrite transporter CH58_RS10870 PF10414 Sirohaem synthase dimerisation region CH58_RS10870 PF14824 Sirohaem biosynthesis protein central CH58_RS10870 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CH58_RS10875 PF00579 tRNA synthetases class I (W and Y) CH58_RS10880 PF13419 Haloacid dehalogenase-like hydrolase CH58_RS10885 PF00834 Ribulose-phosphate 3 epimerase family CH58_RS10890 PF02086 D12 class N6 adenine-specific DNA methyltransferase CH58_RS10895 PF05036 Sporulation related domain CH58_RS10900 PF01761 3-dehydroquinate synthase CH58_RS10905 PF01202 Shikimate kinase CH58_RS10910 PF03958 Bacterial type II/III secretion system short domain CH58_RS10910 PF00263 Bacterial type II and III secretion system protein CH58_RS10940 PF00905 Penicillin binding protein transpeptidase domain CH58_RS10940 PF17092 Penicillin-binding protein OB-like domain CH58_RS10940 PF00912 Transglycosylase CH58_RS10945 PF00293 NUDIX domain CH58_RS10955 PF07095 Intracellular growth attenuator protein IgaA CH58_RS10960 PF13419 Haloacid dehalogenase-like hydrolase CH58_RS10965 PF01479 S4 domain CH58_RS10970 PF01430 Hsp33 protein CH58_RS10975 PF01293 Phosphoenolpyruvate carboxykinase CH58_RS10980 PF00512 His Kinase A (phospho-acceptor) domain CH58_RS10980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH58_RS10980 PF00672 HAMP domain CH58_RS10985 PF00486 Transcriptional regulatory protein, C terminal CH58_RS10985 PF00072 Response regulator receiver domain CH58_RS10990 PF03449 Transcription elongation factor, N-terminal CH58_RS10990 PF01272 Transcription elongation factor, GreA/GreB, C-term CH58_RS10995 PF09371 Tex-like protein N-terminal domain CH58_RS10995 PF17674 HHH domain CH58_RS10995 PF16921 Tex protein YqgF-like domain CH58_RS10995 PF00575 S1 RNA binding domain CH58_RS11005 PF04023 FeoA domain CH58_RS11010 PF17910 FeoB cytosolic helical domain CH58_RS11010 PF02421 Ferrous iron transport protein B CH58_RS11010 PF07670 Nucleoside recognition CH58_RS11010 PF07664 Ferrous iron transport protein B C terminus CH58_RS11015 PF09012 FeoC like transcriptional regulator CH58_RS11020 PF07338 Protein of unknown function (DUF1471) CH58_RS11025 PF00561 alpha/beta hydrolase fold CH58_RS11030 PF00156 Phosphoribosyl transferase domain CH58_RS11035 PF01106 NifU-like domain CH58_RS11035 PF01521 Iron-sulphur cluster biosynthesis CH58_RS11040 PF02446 4-alpha-glucanotransferase CH58_RS11045 PF00343 Carbohydrate phosphorylase CH58_RS11050 PF00343 Carbohydrate phosphorylase CH58_RS11055 PF00196 Bacterial regulatory proteins, luxR family CH58_RS11055 PF17874 MalT-like TPR region CH58_RS11060 PF00581 Rhodanese-like domain CH58_RS11065 PF01694 Rhomboid family CH58_RS11065 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease CH58_RS11070 PF00455 DeoR C terminal sensor domain CH58_RS11070 PF08220 DeoR-like helix-turn-helix domain CH58_RS11080 PF01695 IstB-like ATP binding protein CH58_RS11085 PF02796 Helix-turn-helix domain of resolvase CH58_RS11085 PF00665 Integrase core domain CH58_RS11090 PF00665 Integrase core domain CH58_RS11090 PF13276 HTH-like domain CH58_RS11090 PF13333 Integrase core domain CH58_RS11095 PF00990 Diguanylate cyclase, GGDEF domain CH58_RS11095 PF08447 PAS fold CH58_RS11095 PF08448 PAS fold CH58_RS11095 PF00563 EAL domain CH58_RS11105 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CH58_RS11105 PF00529 HlyD membrane-fusion protein of T1SS CH58_RS11110 PF00873 AcrB/AcrD/AcrF family CH58_RS11115 PF07906 ShET2 enterotoxin, N-terminal region CH58_RS11125 PF03797 Autotransporter beta-domain CH58_RS11130 PF14496 C-terminal novel E3 ligase, LRR-interacting CH58_RS11130 PF12468 Type III secretion system leucine rich repeat protein CH58_RS11135 PF14496 C-terminal novel E3 ligase, LRR-interacting CH58_RS11135 PF12468 Type III secretion system leucine rich repeat protein CH58_RS11135 PF14496 C-terminal novel E3 ligase, LRR-interacting CH58_RS11135 PF12468 Type III secretion system leucine rich repeat protein CH58_RS11145 PF01797 Transposase IS200 like CH58_RS11150 PF14496 C-terminal novel E3 ligase, LRR-interacting CH58_RS11150 PF12468 Type III secretion system leucine rich repeat protein CH58_RS11155 PF03806 AbgT putative transporter family CH58_RS11160 PF01546 Peptidase family M20/M25/M40 CH58_RS11160 PF07687 Peptidase dimerisation domain CH58_RS11165 PF00593 TonB dependent receptor CH58_RS11165 PF07715 TonB-dependent Receptor Plug Domain CH58_RS11170 PF00550 Phosphopantetheine attachment site CH58_RS11170 PF13193 AMP-binding enzyme C-terminal domain CH58_RS11170 PF00109 Beta-ketoacyl synthase, N-terminal domain CH58_RS11170 PF00668 Condensation domain CH58_RS11170 PF02801 Beta-ketoacyl synthase, C-terminal domain CH58_RS11170 PF16197 Ketoacyl-synthetase C-terminal extension CH58_RS11170 PF00202 Aminotransferase class-III CH58_RS11170 PF00501 AMP-binding enzyme CH58_RS11190 PF01695 IstB-like ATP binding protein CH58_RS11195 PF00668 Condensation domain CH58_RS11195 PF00501 AMP-binding enzyme CH58_RS11195 PF00550 Phosphopantetheine attachment site CH58_RS11195 PF08242 Methyltransferase domain CH58_RS11200 PF00501 AMP-binding enzyme CH58_RS11200 PF00668 Condensation domain CH58_RS11200 PF13193 AMP-binding enzyme C-terminal domain CH58_RS11205 PF00501 AMP-binding enzyme CH58_RS11205 PF00550 Phosphopantetheine attachment site CH58_RS11205 PF08242 Methyltransferase domain CH58_RS11205 PF00668 Condensation domain CH58_RS11220 PF00975 Thioesterase domain CH58_RS11235 PF00664 ABC transporter transmembrane region CH58_RS11235 PF00005 ABC transporter CH58_RS11250 PF02447 GntP family permease CH58_RS11260 PF12951 Passenger-associated-transport-repeat CH58_RS11265 PF12951 Passenger-associated-transport-repeat CH58_RS11270 PF04717 Type VI secretion system, phage-baseplate injector CH58_RS11280 PF05593 RHS Repeat CH58_RS11280 PF03527 RHS protein CH58_RS11295 PF00939 Sodium:sulfate symporter transmembrane region CH58_RS11300 PF00356 Bacterial regulatory proteins, lacI family CH58_RS11310 PF13276 HTH-like domain CH58_RS11310 PF13333 Integrase core domain CH58_RS11310 PF00665 Integrase core domain CH58_RS11320 PF05947 Type VI secretion system, TssF CH58_RS11340 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE CH58_RS11350 PF00004 ATPase family associated with various cellular activities (AAA) CH58_RS11350 PF07724 AAA domain (Cdc48 subfamily) CH58_RS11350 PF10431 C-terminal, D2-small domain, of ClpB protein CH58_RS11350 PF17871 AAA lid domain CH58_RS11385 PF04717 Type VI secretion system, phage-baseplate injector CH58_RS11400 PF05593 RHS Repeat CH58_RS11400 PF03527 RHS protein CH58_RS11430 PF04717 Type VI secretion system, phage-baseplate injector CH58_RS11440 PF05593 RHS Repeat CH58_RS11440 PF03527 RHS protein CH58_RS11460 PF01695 IstB-like ATP binding protein CH58_RS11470 PF02796 Helix-turn-helix domain of resolvase CH58_RS11470 PF00665 Integrase core domain CH58_RS11475 PF13673 Acetyltransferase (GNAT) domain CH58_RS11480 PF00485 Phosphoribulokinase / Uridine kinase family CH58_RS11485 PF03099 Biotin/lipoate A/B protein ligase family CH58_RS11485 PF02237 Biotin protein ligase C terminal domain CH58_RS11485 PF08279 HTH domain CH58_RS11490 PF01565 FAD binding domain CH58_RS11490 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CH58_RS11525 PF12724 Flavodoxin domain CH58_RS11530 PF02386 Cation transport protein CH58_RS11535 PF09186 Domain of unknown function (DUF1949) CH58_RS11535 PF01205 Uncharacterized protein family UPF0029 CH58_RS11540 PF01797 Transposase IS200 like CH58_RS11545 PF09186 Domain of unknown function (DUF1949) CH58_RS11545 PF01205 Uncharacterized protein family UPF0029 CH58_RS11550 PF00557 Metallopeptidase family M24 CH58_RS11555 PF00378 Enoyl-CoA hydratase/isomerase CH58_RS11555 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CH58_RS11555 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CH58_RS11560 PF02803 Thiolase, C-terminal domain CH58_RS11560 PF00108 Thiolase, N-terminal domain CH58_RS11565 PF00175 Oxidoreductase NAD-binding domain CH58_RS11565 PF00970 Oxidoreductase FAD-binding domain CH58_RS11570 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CH58_RS11575 PF02357 Transcription termination factor nusG CH58_RS11580 PF00490 Delta-aminolevulinic acid dehydratase CH58_RS11585 PF01026 TatD related DNase CH58_RS11590 PF01695 IstB-like ATP binding protein CH58_RS11600 PF02796 Helix-turn-helix domain of resolvase CH58_RS11600 PF00665 Integrase core domain CH58_RS11615 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CH58_RS11615 PF00529 HlyD membrane-fusion protein of T1SS CH58_RS11620 PF00005 ABC transporter CH58_RS11620 PF03412 Peptidase C39 family CH58_RS11620 PF00664 ABC transporter transmembrane region CH58_RS11625 PF01797 Transposase IS200 like CH58_RS11630 PF06005 Cell division protein ZapB CH58_RS11640 PF00230 Major intrinsic protein CH58_RS11645 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CH58_RS11645 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CH58_RS11650 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CH58_RS11655 PF00970 Oxidoreductase FAD-binding domain CH58_RS11655 PF00175 Oxidoreductase NAD-binding domain CH58_RS11660 PF05656 Protein of unknown function (DUF805) CH58_RS11665 PF07305 Protein of unknown function (DUF1454) CH58_RS11670 PF00121 Triosephosphate isomerase CH58_RS11675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH58_RS11675 PF03466 LysR substrate binding domain CH58_RS11680 PF02585 GlcNAc-PI de-N-acetylase CH58_RS11685 PF03737 Aldolase/RraA CH58_RS11690 PF00939 Sodium:sulfate symporter transmembrane region CH58_RS11705 PF00365 Phosphofructokinase CH58_RS11710 PF01545 Cation efflux family CH58_RS11710 PF16916 Dimerisation domain of Zinc Transporter CH58_RS11715 PF04754 Putative transposase, YhgA-like CH58_RS11720 PF07813 LTXXQ motif family protein CH58_RS11725 PF00072 Response regulator receiver domain CH58_RS11725 PF00486 Transcriptional regulatory protein, C terminal CH58_RS11730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH58_RS11730 PF00672 HAMP domain CH58_RS11730 PF16527 Two-component sensor protein CpxA, periplasmic domain CH58_RS11730 PF00512 His Kinase A (phospho-acceptor) domain CH58_RS11735 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CH58_RS11735 PF12833 Helix-turn-helix domain CH58_RS11735 PF02805 Metal binding domain of Ada CH58_RS11735 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CH58_RS11740 PF00588 SpoU rRNA Methylase family CH58_RS11745 PF00132 Bacterial transferase hexapeptide (six repeats) CH58_RS11745 PF06426 Serine acetyltransferase, N-terminal CH58_RS11755 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CH58_RS11755 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CH58_RS11760 PF02556 Preprotein translocase subunit SecB CH58_RS11765 PF00462 Glutaredoxin CH58_RS11770 PF00581 Rhodanese-like domain CH58_RS11775 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CH58_RS11775 PF01676 Metalloenzyme superfamily CH58_RS11780 PF01551 Peptidase family M23 CH58_RS11790 PF08240 Alcohol dehydrogenase GroES-like domain CH58_RS11790 PF00107 Zinc-binding dehydrogenase CH58_RS11795 PF00155 Aminotransferase class I and II CH58_RS11800 PF01370 NAD dependent epimerase/dehydratase family CH58_RS11805 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CH58_RS11810 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CH58_RS11815 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CH58_RS11820 PF00535 Glycosyl transferase family 2 CH58_RS11825 PF01467 Cytidylyltransferase-like CH58_RS11830 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CH58_RS11830 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CH58_RS11830 PF06827 Zinc finger found in FPG and IleRS CH58_RS11835 PF00471 Ribosomal protein L33 CH58_RS11840 PF00830 Ribosomal L28 family CH58_RS11845 PF04002 RadC-like JAB domain CH58_RS11850 PF04127 DNA / pantothenate metabolism flavoprotein CH58_RS11850 PF02441 Flavoprotein CH58_RS11855 PF00692 dUTPase CH58_RS11860 PF00440 Bacterial regulatory proteins, tetR family CH58_RS11865 PF00156 Phosphoribosyl transferase domain CH58_RS11870 PF01138 3' exoribonuclease family, domain 1 CH58_RS11870 PF03725 3' exoribonuclease family, domain 2 CH58_RS11875 PF08340 Domain of unknown function (DUF1732) CH58_RS11875 PF03755 YicC-like family, N-terminal region CH58_RS11880 PF03458 UPF0126 domain CH58_RS11885 PF01653 NAD-dependent DNA ligase adenylation domain CH58_RS11885 PF03120 NAD-dependent DNA ligase OB-fold domain CH58_RS11890 PF00625 Guanylate kinase CH58_RS11895 PF01192 RNA polymerase Rpb6 CH58_RS11900 PF13291 ACT domain CH58_RS11900 PF04607 Region found in RelA / SpoT proteins CH58_RS11900 PF02824 TGS domain CH58_RS11905 PF00588 SpoU rRNA Methylase family CH58_RS11905 PF12105 SpoU, rRNA methylase, C-terminal CH58_RS11910 PF00271 Helicase conserved C-terminal domain CH58_RS11910 PF00270 DEAD/DEAH box helicase CH58_RS11910 PF17191 RecG wedge domain CH58_RS11915 PF03616 Sodium/glutamate symporter CH58_RS11920 PF00860 Permease family CH58_RS11925 PF05170 AsmA family CH58_RS11930 PF09500 Putative thioesterase (yiiD_Cterm) CH58_RS11930 PF00583 Acetyltransferase (GNAT) family CH58_RS11935 PF02796 Helix-turn-helix domain of resolvase CH58_RS11935 PF00665 Integrase core domain CH58_RS11940 PF00665 Integrase core domain CH58_RS11940 PF02796 Helix-turn-helix domain of resolvase CH58_RS11945 PF01695 IstB-like ATP binding protein CH58_RS11950 PF02580 D-Tyr-tRNA(Tyr) deacylase CH58_RS11955 PF03631 Virulence factor BrkB CH58_RS11960 PF13419 Haloacid dehalogenase-like hydrolase CH58_RS11965 PF00679 Elongation factor G C-terminus CH58_RS11965 PF03144 Elongation factor Tu domain 2 CH58_RS11965 PF00009 Elongation factor Tu GTP binding domain CH58_RS11975 PF03951 Glutamine synthetase, beta-Grasp domain CH58_RS11975 PF00120 Glutamine synthetase, catalytic domain CH58_RS11985 PF01797 Transposase IS200 like CH58_RS11990 PF00512 His Kinase A (phospho-acceptor) domain CH58_RS11990 PF00989 PAS fold CH58_RS11990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH58_RS11995 PF00072 Response regulator receiver domain CH58_RS11995 PF00158 Sigma-54 interaction domain CH58_RS11995 PF02954 Bacterial regulatory protein, Fis family CH58_RS12000 PF04055 Radical SAM superfamily CH58_RS12000 PF06969 HemN C-terminal domain CH58_RS12005 PF04220 Der GTPase activator (YihI) CH58_RS12010 PF01926 50S ribosome-binding GTPase CH58_RS12015 PF01797 Transposase IS200 like CH58_RS12025 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CH58_RS12025 PF01367 5'-3' exonuclease, C-terminal SAM fold CH58_RS12025 PF00476 DNA polymerase family A CH58_RS12025 PF01612 3'-5' exonuclease CH58_RS12030 PF01323 DSBA-like thioredoxin domain CH58_RS12035 PF01636 Phosphotransferase enzyme family CH58_RS12040 PF06288 Protein of unknown function (DUF1040) CH58_RS12045 PF12804 MobA-like NTP transferase domain CH58_RS12050 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CH58_RS12055 PF00872 Transposase, Mutator family CH58_RS12085 PF07729 FCD domain CH58_RS12085 PF00392 Bacterial regulatory proteins, gntR family CH58_RS12090 PF07690 Major Facilitator Superfamily CH58_RS12100 PF00294 pfkB family carbohydrate kinase CH58_RS12105 PF05025 RbsD / FucU transport protein family CH58_RS12110 PF02705 K+ potassium transporter CH58_RS12115 PF01695 IstB-like ATP binding protein CH58_RS12130 PF07728 AAA domain (dynein-related subfamily) CH58_RS12130 PF17868 AAA lid domain CH58_RS12130 PF12592 Protein of unknown function (DUF3763) CH58_RS12135 PF05762 VWA domain containing CoxE-like protein CH58_RS12140 PF03590 Aspartate-ammonia ligase CH58_RS12145 PF01037 Lrp/AsnC ligand binding domain CH58_RS12150 PF00258 Flavodoxin CH58_RS12155 PF01134 Glucose inhibited division protein A CH58_RS12155 PF13932 GidA associated domain CH58_RS12160 PF02527 rRNA small subunit methyltransferase G CH58_RS12165 PF03899 ATP synthase I chain CH58_RS12170 PF00119 ATP synthase A chain CH58_RS12175 PF00137 ATP synthase subunit C CH58_RS12180 PF00430 ATP synthase B/B' CF(0) CH58_RS12185 PF00213 ATP synthase delta (OSCP) subunit CH58_RS12190 PF00306 ATP synthase alpha/beta chain, C terminal domain CH58_RS12190 PF02874 ATP synthase alpha/beta family, beta-barrel domain CH58_RS12190 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CH58_RS12195 PF00231 ATP synthase CH58_RS12200 PF02874 ATP synthase alpha/beta family, beta-barrel domain CH58_RS12200 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CH58_RS12205 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CH58_RS12205 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CH58_RS12210 PF00132 Bacterial transferase hexapeptide (six repeats) CH58_RS12210 PF12804 MobA-like NTP transferase domain CH58_RS12215 PF01380 SIS domain CH58_RS12220 PF12849 PBP superfamily domain CH58_RS12225 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS12230 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS12235 PF00005 ABC transporter CH58_RS12240 PF01895 PhoU domain CH58_RS12250 PF00497 Bacterial extracellular solute-binding proteins, family 3 CH58_RS12255 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS12260 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS12265 PF13419 Haloacid dehalogenase-like hydrolase CH58_RS12270 PF00860 Permease family CH58_RS12285 PF07055 Enoyl reductase FAD binding domain CH58_RS12285 PF12241 Trans-2-enoyl-CoA reductase catalytic region CH58_RS12285 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase CH58_RS12290 PF12631 MnmE helical domain CH58_RS12290 PF01926 50S ribosome-binding GTPase CH58_RS12290 PF10396 GTP-binding protein TrmE N-terminus CH58_RS12295 PF14849 YidC periplasmic domain CH58_RS12295 PF02096 60Kd inner membrane protein CH58_RS12300 PF00825 Ribonuclease P CH58_RS12305 PF00468 Ribosomal protein L34 CH58_RS12310 PF00308 Bacterial dnaA protein CH58_RS12310 PF08299 Bacterial dnaA protein helix-turn-helix CH58_RS12310 PF11638 DnaA N-terminal domain CH58_RS12315 PF02767 DNA polymerase III beta subunit, central domain CH58_RS12315 PF00712 DNA polymerase III beta subunit, N-terminal domain CH58_RS12315 PF02768 DNA polymerase III beta subunit, C-terminal domain CH58_RS12325 PF02463 RecF/RecN/SMC N terminal domain CH58_RS12330 PF00204 DNA gyrase B CH58_RS12330 PF00986 DNA gyrase B subunit, carboxyl terminus CH58_RS12330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH58_RS12330 PF01751 Toprim domain CH58_RS12330 PF18053 DNA gyrase B subunit insert domain CH58_RS12340 PF13276 HTH-like domain CH58_RS12340 PF00665 Integrase core domain CH58_RS12340 PF13333 Integrase core domain CH58_RS12355 PF01757 Acyltransferase family CH58_RS12360 PF00419 Fimbrial protein CH58_RS12380 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CH58_RS12380 PF02753 Pili assembly chaperone PapD, C-terminal domain CH58_RS12390 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CH58_RS12390 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CH58_RS12400 PF13407 Periplasmic binding protein domain CH58_RS12405 PF00005 ABC transporter CH58_RS12410 PF02653 Branched-chain amino acid transport system / permease component CH58_RS12415 PF12833 Helix-turn-helix domain CH58_RS12420 PF14659 Phage integrase, N-terminal SAM-like domain CH58_RS12420 PF00589 Phage integrase family CH58_RS12420 PF13356 Arm DNA-binding domain CH58_RS12430 PF04606 Ogr/Delta-like zinc finger CH58_RS12435 PF13737 Transposase DDE domain CH58_RS12440 PF13737 Transposase DDE domain CH58_RS12460 PF00005 ABC transporter CH58_RS12465 PF01032 FecCD transport family CH58_RS12470 PF01032 FecCD transport family CH58_RS12475 PF01497 Periplasmic binding protein CH58_RS12485 PF01695 IstB-like ATP binding protein CH58_RS12490 PF02796 Helix-turn-helix domain of resolvase CH58_RS12490 PF00665 Integrase core domain CH58_RS12505 PF00156 Phosphoribosyl transferase domain CH58_RS12510 PF00291 Pyridoxal-phosphate dependent enzyme CH58_RS12515 PF01175 Urocanase Rossmann-like domain CH58_RS12515 PF17392 Urocanase C-terminal domain CH58_RS12515 PF17391 Urocanase N-terminal domain CH58_RS12520 PF00221 Aromatic amino acid lyase CH58_RS12525 PF00324 Amino acid permease CH58_RS12530 PF12146 Serine aminopeptidase, S33 CH58_RS12540 PF00196 Bacterial regulatory proteins, luxR family CH58_RS12540 PF00072 Response regulator receiver domain CH58_RS12545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH58_RS12545 PF05231 MASE1 CH58_RS12545 PF07730 Histidine kinase CH58_RS12550 PF02796 Helix-turn-helix domain of resolvase CH58_RS12550 PF00665 Integrase core domain CH58_RS12555 PF02796 Helix-turn-helix domain of resolvase CH58_RS12555 PF00665 Integrase core domain CH58_RS12560 PF01695 IstB-like ATP binding protein CH58_RS12565 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath CH58_RS12570 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 CH58_RS12585 PF00849 RNA pseudouridylate synthase CH58_RS12590 PF05099 Tellurite resistance protein TerB CH58_RS12590 PF00226 DnaJ domain CH58_RS12595 PF04453 LPS transport system D CH58_RS12595 PF03968 OstA-like protein CH58_RS12600 PF09312 SurA N-terminal domain CH58_RS12600 PF00639 PPIC-type PPIASE domain CH58_RS12605 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CH58_RS12610 PF00398 Ribosomal RNA adenine dimethylase CH58_RS12615 PF04379 ApaG domain CH58_RS12620 PF00149 Calcineurin-like phosphoesterase CH58_RS12635 PF01797 Transposase IS200 like CH58_RS12645 PF00186 Dihydrofolate reductase CH58_RS12650 PF12821 Threonine/Serine exporter, ThrE CH58_RS12655 PF06738 Putative threonine/serine exporter CH58_RS12660 PF01810 LysE type translocator CH58_RS12665 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CH58_RS12665 PF02142 MGS-like domain CH58_RS12665 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CH58_RS12670 PF00117 Glutamine amidotransferase class-I CH58_RS12670 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CH58_RS12675 PF01113 Dihydrodipicolinate reductase, N-terminus CH58_RS12675 PF05173 Dihydrodipicolinate reductase, C-terminus CH58_RS12680 PF01797 Transposase IS200 like CH58_RS12695 PF02401 LytB protein CH58_RS12700 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CH58_RS12705 PF01252 Signal peptidase (SPase) II CH58_RS12710 PF00133 tRNA synthetases class I (I, L, M and V) CH58_RS12710 PF06827 Zinc finger found in FPG and IleRS CH58_RS12710 PF08264 Anticodon-binding domain of tRNA CH58_RS12715 PF06574 FAD synthetase CH58_RS12715 PF01687 Riboflavin kinase CH58_RS12725 PF01649 Ribosomal protein S20 CH58_RS12730 PF03466 LysR substrate binding domain CH58_RS12730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH58_RS12735 PF06965 Na+/H+ antiporter 1 CH58_RS12740 PF00684 DnaJ central domain CH58_RS12740 PF01556 DnaJ C terminal domain CH58_RS12740 PF00226 DnaJ domain CH58_RS12745 PF00012 Hsp70 protein CH58_RS12750 PF01184 GPR1/FUN34/yaaH family CH58_RS12760 PF07690 Major Facilitator Superfamily CH58_RS12765 PF00994 Probable molybdopterin binding domain CH58_RS12770 PF00923 Transaldolase/Fructose-6-phosphate aldolase CH58_RS12775 PF03883 Peroxide stress protein YaaA CH58_RS12780 PF14821 Threonine synthase N terminus CH58_RS12780 PF00291 Pyridoxal-phosphate dependent enzyme CH58_RS12785 PF00288 GHMP kinases N terminal domain CH58_RS12785 PF08544 GHMP kinases C terminal CH58_RS12790 PF00742 Homoserine dehydrogenase CH58_RS12790 PF13840 ACT domain CH58_RS12790 PF00696 Amino acid kinase family CH58_RS12790 PF01842 ACT domain CH58_RS12790 PF03447 Homoserine dehydrogenase, NAD binding domain CH58_RS12795 PF00072 Response regulator receiver domain CH58_RS12795 PF00486 Transcriptional regulatory protein, C terminal CH58_RS12800 PF05981 CreA protein CH58_RS12805 PF12833 Helix-turn-helix domain CH58_RS12805 PF06445 GyrI-like small molecule binding domain CH58_RS12810 PF00300 Histidine phosphatase superfamily (branch 1) CH58_RS12815 PF01931 Protein of unknown function DUF84 CH58_RS12820 PF01371 Trp repressor protein CH58_RS12825 PF14718 Soluble lytic murein transglycosylase L domain CH58_RS12825 PF01464 Transglycosylase SLT domain CH58_RS12830 PF00689 Cation transporting ATPase, C-terminus CH58_RS12830 PF00690 Cation transporter/ATPase, N-terminus CH58_RS12840 PF17152 Periplasmic sensor domain CH58_RS12840 PF00990 Diguanylate cyclase, GGDEF domain CH58_RS12845 PF00691 OmpA family CH58_RS12855 PF01695 IstB-like ATP binding protein CH58_RS12875 PF00474 Sodium:solute symporter family CH58_RS12880 PF04341 Protein of unknown function, DUF485 CH58_RS12885 PF16177 Acetyl-coenzyme A synthetase N-terminus CH58_RS12885 PF00501 AMP-binding enzyme CH58_RS12885 PF13193 AMP-binding enzyme C-terminal domain CH58_RS12890 PF00375 Sodium:dicarboxylate symporter family CH58_RS12895 PF00196 Bacterial regulatory proteins, luxR family CH58_RS12895 PF00072 Response regulator receiver domain CH58_RS12900 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CH58_RS12900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH58_RS12900 PF00672 HAMP domain CH58_RS12900 PF00512 His Kinase A (phospho-acceptor) domain CH58_RS12900 PF00072 Response regulator receiver domain CH58_RS12900 PF01627 Hpt domain CH58_RS12905 PF03958 Bacterial type II/III secretion system short domain CH58_RS12905 PF00263 Bacterial type II and III secretion system protein CH58_RS12920 PF12833 Helix-turn-helix domain CH58_RS12920 PF14525 AraC-binding-like domain CH58_RS12940 PF01514 Secretory protein of YscJ/FliF family CH58_RS12955 PF00771 FHIPEP family CH58_RS12960 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CH58_RS12960 PF18269 T3SS EscN ATPase C-terminal domain CH58_RS12975 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CH58_RS12980 PF00813 FliP family CH58_RS12985 PF01313 Bacterial export proteins, family 3 CH58_RS12990 PF01311 Bacterial export proteins, family 1 CH58_RS12995 PF01312 FlhB HrpN YscU SpaS Family CH58_RS13000 PF04143 Sulphur transport CH58_RS13005 PF01206 Sulfurtransferase TusA CH58_RS13010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH58_RS13010 PF03466 LysR substrate binding domain CH58_RS13015 PF03222 Tryptophan/tyrosine permease family CH58_RS13020 PF01053 Cys/Met metabolism PLP-dependent enzyme CH58_RS13025 PF00005 ABC transporter CH58_RS13030 PF01032 FecCD transport family CH58_RS13035 PF01497 Periplasmic binding protein CH58_RS13040 PF05171 Haemin-degrading HemS.ChuX domain CH58_RS13045 PF07715 TonB-dependent Receptor Plug Domain CH58_RS13045 PF00593 TonB dependent receptor CH58_RS13050 PF13460 NAD(P)H-binding CH58_RS13055 PF06228 Haem utilisation ChuX/HutX CH58_RS13060 PF04055 Radical SAM superfamily CH58_RS13080 PF11202 Phosphoribosyl transferase (PRTase) CH58_RS13080 PF15608 PELOTA RNA binding domain CH58_RS13100 PF02342 TerD domain CH58_RS13105 PF02342 TerD domain CH58_RS13110 PF05099 Tellurite resistance protein TerB CH58_RS13115 PF03741 Integral membrane protein TerC family CH58_RS13120 PF02342 TerD domain CH58_RS13125 PF02342 TerD domain CH58_RS13135 PF00577 Outer membrane usher protein CH58_RS13135 PF13954 PapC N-terminal domain CH58_RS13135 PF13953 PapC C-terminal domain CH58_RS13140 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CH58_RS13160 PF01565 FAD binding domain CH58_RS13160 PF08031 Berberine and berberine like CH58_RS13165 PF12951 Passenger-associated-transport-repeat CH58_RS13170 PF04345 Chorismate lyase CH58_RS13175 PF01040 UbiA prenyltransferase family CH58_RS13185 PF01219 Prokaryotic diacylglycerol kinase CH58_RS13190 PF01726 LexA DNA binding domain CH58_RS13190 PF00717 Peptidase S24-like CH58_RS13195 PF01475 Ferric uptake regulator family CH58_RS13200 PF01207 Dihydrouridine synthase (Dus) CH58_RS13205 PF09583 Phage shock protein G (Phageshock_PspG) CH58_RS13210 PF08240 Alcohol dehydrogenase GroES-like domain CH58_RS13210 PF00107 Zinc-binding dehydrogenase CH58_RS13215 PF00772 DnaB-like helicase N terminal domain CH58_RS13215 PF03796 DnaB-like helicase C terminal domain CH58_RS13220 PF01168 Alanine racemase, N-terminal domain CH58_RS13220 PF00842 Alanine racemase, C-terminal domain CH58_RS13225 PF00155 Aminotransferase class I and II CH58_RS13230 PF04237 YjbR CH58_RS13235 PF17760 UvrA interaction domain CH58_RS13235 PF00005 ABC transporter CH58_RS13235 PF17755 UvrA DNA-binding domain CH58_RS13245 PF05336 L-rhamnose mutarotase CH58_RS13250 PF00465 Iron-containing alcohol dehydrogenase CH58_RS13255 PF02796 Helix-turn-helix domain of resolvase CH58_RS13255 PF00665 Integrase core domain CH58_RS13260 PF01695 IstB-like ATP binding protein CH58_RS13265 PF00465 Iron-containing alcohol dehydrogenase CH58_RS13270 PF00596 Class II Aldolase and Adducin N-terminal domain CH58_RS13275 PF06134 L-rhamnose isomerase (RhaA) CH58_RS13280 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CH58_RS13280 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CH58_RS13295 PF02311 AraC-like ligand binding domain CH58_RS13295 PF12833 Helix-turn-helix domain CH58_RS13300 PF12833 Helix-turn-helix domain CH58_RS13300 PF02311 AraC-like ligand binding domain CH58_RS13305 PF06379 L-rhamnose-proton symport protein (RhaT) CH58_RS13340 PF07992 Pyridine nucleotide-disulphide oxidoreductase CH58_RS13340 PF13247 4Fe-4S dicluster domain CH58_RS13340 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CH58_RS13345 PF12800 4Fe-4S binding domain CH58_RS13345 PF13247 4Fe-4S dicluster domain CH58_RS13350 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CH58_RS13350 PF01568 Molydopterin dinucleotide binding domain CH58_RS13350 PF00384 Molybdopterin oxidoreductase CH58_RS13355 PF11412 Disulphide bond corrector protein DsbC CH58_RS13355 PF02683 Cytochrome C biogenesis protein transmembrane region CH58_RS13360 PF03091 CutA1 divalent ion tolerance protein CH58_RS13365 PF03605 Anaerobic c4-dicarboxylate membrane transporter CH58_RS13370 PF00206 Lyase CH58_RS13370 PF10415 Fumarase C C-terminus CH58_RS13375 PF04186 FxsA cytoplasmic membrane protein CH58_RS13380 PF00166 Chaperonin 10 Kd subunit CH58_RS13385 PF00118 TCP-1/cpn60 chaperonin family CH58_RS13390 PF13698 Domain of unknown function (DUF4156) CH58_RS13395 PF04055 Radical SAM superfamily CH58_RS13400 PF08207 Elongation factor P (EF-P) KOW-like domain CH58_RS13400 PF09285 Elongation factor P, C-terminal CH58_RS13400 PF01132 Elongation factor P (EF-P) OB domain CH58_RS13405 PF00893 Small Multidrug Resistance protein CH58_RS13410 PF02313 Fumarate reductase subunit D CH58_RS13415 PF02300 Fumarate reductase subunit C CH58_RS13420 PF13183 4Fe-4S dicluster domain CH58_RS13420 PF13085 2Fe-2S iron-sulfur cluster binding domain CH58_RS13425 PF00890 FAD binding domain CH58_RS13425 PF02910 Fumarate reductase flavoprotein C-term CH58_RS13435 PF00152 tRNA synthetases class II (D, K and N) CH58_RS13440 PF00924 Mechanosensitive ion channel CH58_RS13440 PF12795 Mechanosensitive ion channel porin domain CH58_RS13440 PF12794 Mechanosensitive ion channel inner membrane domain 1 CH58_RS13445 PF02666 Phosphatidylserine decarboxylase CH58_RS13450 PF03193 RsgA GTPase CH58_RS13460 PF00929 Exonuclease CH58_RS13480 PF08331 Domain of unknown function (DUF1730) CH58_RS13485 PF01256 Carbohydrate kinase CH58_RS13485 PF03853 YjeF-related protein N-terminus CH58_RS13490 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CH58_RS13495 PF01520 N-acetylmuramoyl-L-alanine amidase CH58_RS13500 PF01119 DNA mismatch repair protein, C-terminal domain CH58_RS13500 PF08676 MutL C terminal dimerisation domain CH58_RS13510 PF17209 Hfq protein CH58_RS13515 PF01926 50S ribosome-binding GTPase CH58_RS13515 PF13167 GTP-binding GTPase N-terminal CH58_RS13515 PF16360 GTP-binding GTPase Middle Region CH58_RS13520 PF01145 SPFH domain / Band 7 family CH58_RS13520 PF12221 Bacterial membrane protein N terminal CH58_RS13525 PF01145 SPFH domain / Band 7 family CH58_RS13530 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) CH58_RS13535 PF00709 Adenylosuccinate synthetase CH58_RS13540 PF02082 Transcriptional regulator CH58_RS13545 PF00773 RNB domain CH58_RS13545 PF08461 Ribonuclease R winged-helix domain CH58_RS13545 PF00575 S1 RNA binding domain CH58_RS13545 PF08206 Ribonuclease B OB domain CH58_RS13545 PF17876 Cold shock domain CH58_RS13550 PF08032 RNA 2'-O ribose methyltransferase substrate binding CH58_RS13550 PF00588 SpoU rRNA Methylase family CH58_RS13555 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CH58_RS13555 PF18158 Adaptive response protein AidB N-terminal domain CH58_RS13555 PF02770 Acyl-CoA dehydrogenase, middle domain CH58_RS13560 PF07338 Protein of unknown function (DUF1471) CH58_RS13570 PF01695 IstB-like ATP binding protein CH58_RS13575 PF02796 Helix-turn-helix domain of resolvase CH58_RS13575 PF00665 Integrase core domain CH58_RS13580 PF07728 AAA domain (dynein-related subfamily) CH58_RS13580 PF12102 Domain of unknown function (DUF3578) CH58_RS13595 PF01527 Transposase CH58_RS13600 PF01555 DNA methylase CH58_RS13625 PF00665 Integrase core domain CH58_RS13650 PF05987 Bacterial protein of unknown function (DUF898) CH58_RS13660 PF12833 Helix-turn-helix domain CH58_RS13665 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CH58_RS13670 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CH58_RS13680 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CH58_RS13680 PF05524 PEP-utilising enzyme, N-terminal CH58_RS13680 PF00391 PEP-utilising enzyme, mobile domain CH58_RS13680 PF02896 PEP-utilising enzyme, TIM barrel domain CH58_RS13680 PF00381 PTS HPr component phosphorylation site CH58_RS13685 PF10696 Protein of unknown function (DUF2501) CH58_RS13690 PF03992 Antibiotic biosynthesis monooxygenase CH58_RS13695 PF01791 DeoC/LacD family aldolase CH58_RS13700 PF13407 Periplasmic binding protein domain CH58_RS13705 PF02653 Branched-chain amino acid transport system / permease component CH58_RS13710 PF02653 Branched-chain amino acid transport system / permease component CH58_RS13715 PF00005 ABC transporter CH58_RS13730 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CH58_RS13730 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CH58_RS13735 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CH58_RS13755 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CH58_RS13780 PF01095 Pectinesterase CH58_RS13785 PF00990 Diguanylate cyclase, GGDEF domain CH58_RS13790 PF07256 Protein of unknown function (DUF1435) CH58_RS13800 PF08468 Methyltransferase small domain N-terminal CH58_RS13800 PF05175 Methyltransferase small domain CH58_RS13805 PF03603 DNA polymerase III psi subunit CH58_RS13810 PF00583 Acetyltransferase (GNAT) family CH58_RS13815 PF16658 Class II release factor RF3, C-terminal domain CH58_RS13815 PF00009 Elongation factor Tu GTP binding domain CH58_RS13815 PF03144 Elongation factor Tu domain 2 CH58_RS13820 PF04972 BON domain CH58_RS13825 PF07043 Protein of unknown function (DUF1328) CH58_RS13830 PF01734 Patatin-like phospholipase CH58_RS13835 PF01026 TatD related DNase CH58_RS13840 PF01773 Na+ dependent nucleoside transporter N-terminus CH58_RS13840 PF07662 Na+ dependent nucleoside transporter C-terminus CH58_RS13840 PF07670 Nucleoside recognition CH58_RS13845 PF01791 DeoC/LacD family aldolase CH58_RS13850 PF02885 Glycosyl transferase family, helical bundle domain CH58_RS13850 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CH58_RS13850 PF00591 Glycosyl transferase family, a/b domain CH58_RS13855 PF00591 Glycosyl transferase family, a/b domain CH58_RS13855 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CH58_RS13855 PF02885 Glycosyl transferase family, helical bundle domain CH58_RS13860 PF01676 Metalloenzyme superfamily CH58_RS13865 PF01048 Phosphorylase superfamily CH58_RS13870 PF10144 Bacterial virulence factor haemolysin CH58_RS13875 PF18429 Domain of unknown function (DUF5609) CH58_RS13880 PF18073 Rubredoxin metal binding domain CH58_RS13885 PF01381 Helix-turn-helix CH58_RS13885 PF13521 AAA domain CH58_RS13890 PF02661 Fic/DOC family CH58_RS13895 PF12848 ABC transporter CH58_RS13895 PF00005 ABC transporter CH58_RS13910 PF01695 IstB-like ATP binding protein CH58_RS13915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH58_RS13915 PF05231 MASE1 CH58_RS13915 PF07730 Histidine kinase CH58_RS13920 PF07690 Major Facilitator Superfamily CH58_RS13935 PF01797 Transposase IS200 like CH58_RS13940 PF04829 Pre-toxin domain with VENN motif CH58_RS13940 PF05860 haemagglutination activity domain CH58_RS13940 PF05594 Haemagluttinin repeat CH58_RS13940 PF13332 Hemagglutinin repeat CH58_RS13945 PF08479 POTRA domain, ShlB-type CH58_RS13945 PF17287 POTRA domain CH58_RS13945 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CH58_RS13955 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CH58_RS13960 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS13965 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS13965 PF12911 N-terminal TM domain of oligopeptide transport permease C CH58_RS13970 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CH58_RS13970 PF00005 ABC transporter CH58_RS13975 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CH58_RS13975 PF00005 ABC transporter CH58_RS13980 PF01270 Glycosyl hydrolases family 8 CH58_RS13985 PF00563 EAL domain CH58_RS13985 PF17154 Gammaproteobacterial periplasmic sensor domain CH58_RS13985 PF00990 Diguanylate cyclase, GGDEF domain CH58_RS13985 PF00672 HAMP domain CH58_RS13990 PF06178 Oligogalacturonate-specific porin protein (KdgM) CH58_RS13995 PF06917 Periplasmic pectate lyase CH58_RS14005 PF00375 Sodium:dicarboxylate symporter family CH58_RS14010 PF05193 Peptidase M16 inactive domain CH58_RS14010 PF00675 Insulinase (Peptidase family M16) CH58_RS14015 PF00294 pfkB family carbohydrate kinase CH58_RS14020 PF01361 Tautomerase enzyme CH58_RS14025 PF00563 EAL domain CH58_RS14030 PF05170 AsmA family CH58_RS14035 PF02611 CDP-diacylglycerol pyrophosphatase CH58_RS14040 PF03631 Virulence factor BrkB CH58_RS14065 PF02595 Glycerate kinase family CH58_RS14070 PF02447 GntP family permease CH58_RS14075 PF17853 GGDEF-like domain CH58_RS14075 PF05651 Putative sugar diacid recognition CH58_RS14075 PF13556 PucR C-terminal helix-turn-helix domain CH58_RS14080 PF07992 Pyridine nucleotide-disulphide oxidoreductase CH58_RS14080 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CH58_RS14085 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CH58_RS14090 PF01432 Peptidase family M3 CH58_RS14095 PF04445 Putative SAM-dependent methyltransferase CH58_RS14100 PF08548 Peptidase M10 serralysin C terminal CH58_RS14100 PF00413 Matrixin CH58_RS14100 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) CH58_RS14105 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CH58_RS14105 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CH58_RS14110 PF00582 Universal stress protein family CH58_RS14115 PF10625 Universal stress protein B (UspB) CH58_RS14120 PF01797 Transposase IS200 like CH58_RS14130 PF01384 Phosphate transporter family CH58_RS14140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH58_RS14140 PF00512 His Kinase A (phospho-acceptor) domain CH58_RS14140 PF08448 PAS fold CH58_RS14140 PF13188 PAS domain CH58_RS14140 PF00072 Response regulator receiver domain CH58_RS14145 PF00005 ABC transporter CH58_RS14155 PF13407 Periplasmic binding protein domain CH58_RS14165 PF01116 Fructose-bisphosphate aldolase class-II CH58_RS14175 PF00486 Transcriptional regulatory protein, C terminal CH58_RS14175 PF00072 Response regulator receiver domain CH58_RS14185 PF17954 Quercetinase C-terminal cupin domain CH58_RS14185 PF02678 Pirin CH58_RS14190 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CH58_RS14190 PF00356 Bacterial regulatory proteins, lacI family CH58_RS14195 PF02447 GntP family permease CH58_RS14200 PF01202 Shikimate kinase CH58_RS14220 PF01914 MarC family integral membrane protein CH58_RS14225 PF01118 Semialdehyde dehydrogenase, NAD binding domain CH58_RS14225 PF02774 Semialdehyde dehydrogenase, dimerisation domain CH58_RS14250 PF09134 Invasin, domain 3 CH58_RS14250 PF02369 Bacterial Ig-like domain (group 1) CH58_RS14250 PF07979 Intimin C-type lectin domain CH58_RS14250 PF11924 Inverse autotransporter, beta-domain CH58_RS14255 PF06580 Histidine kinase CH58_RS14255 PF07694 5TMR of 5TMR-LYT CH58_RS14260 PF02806 Alpha amylase, C-terminal all-beta domain CH58_RS14260 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CH58_RS14260 PF00128 Alpha amylase, catalytic domain CH58_RS14265 PF18390 Glycogen debranching enzyme C-terminal domain CH58_RS14265 PF00128 Alpha amylase, catalytic domain CH58_RS14265 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CH58_RS14275 PF08323 Starch synthase catalytic domain CH58_RS14275 PF00534 Glycosyl transferases group 1 CH58_RS14280 PF00343 Carbohydrate phosphorylase CH58_RS14285 PF01266 FAD dependent oxidoreductase CH58_RS14285 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CH58_RS14310 PF00665 Integrase core domain CH58_RS14310 PF13333 Integrase core domain CH58_RS14310 PF13276 HTH-like domain CH58_RS14320 PF02796 Helix-turn-helix domain of resolvase CH58_RS14320 PF00665 Integrase core domain CH58_RS14330 PF01695 IstB-like ATP binding protein CH58_RS14335 PF13409 Glutathione S-transferase, N-terminal domain CH58_RS14340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH58_RS14340 PF03466 LysR substrate binding domain CH58_RS14345 PF02678 Pirin CH58_RS14345 PF17954 Quercetinase C-terminal cupin domain CH58_RS14350 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CH58_RS14355 PF04348 LppC putative lipoprotein CH58_RS14360 PF02021 Uncharacterised protein family UPF0102 CH58_RS14365 PF13580 SIS domain CH58_RS14370 PF04972 BON domain CH58_RS14375 PF00912 Transglycosylase CH58_RS14390 PF01627 Hpt domain CH58_RS14390 PF18415 Histidine kinase receptor ArcB trans-membrane domain CH58_RS14390 PF00512 His Kinase A (phospho-acceptor) domain CH58_RS14390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH58_RS14390 PF00072 Response regulator receiver domain CH58_RS14390 PF00989 PAS fold CH58_RS14400 PF04055 Radical SAM superfamily CH58_RS14400 PF16199 Radical_SAM C-terminal domain CH58_RS14405 PF01645 Conserved region in glutamate synthase CH58_RS14405 PF01493 GXGXG motif CH58_RS14405 PF04898 Glutamate synthase central domain CH58_RS14405 PF00310 Glutamine amidotransferases class-II CH58_RS14410 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CH58_RS14410 PF07992 Pyridine nucleotide-disulphide oxidoreductase CH58_RS14420 PF04386 Stringent starvation protein B CH58_RS14425 PF02798 Glutathione S-transferase, N-terminal domain CH58_RS14425 PF00043 Glutathione S-transferase, C-terminal domain CH58_RS14435 PF00380 Ribosomal protein S9/S16 CH58_RS14440 PF00572 Ribosomal protein L13 CH58_RS14445 PF03969 AFG1-like ATPase CH58_RS14450 PF06295 Protein of unknown function (DUF1043) CH58_RS14455 PF13180 PDZ domain CH58_RS14455 PF00595 PDZ domain CH58_RS14460 PF01797 Transposase IS200 like CH58_RS14465 PF13180 PDZ domain CH58_RS14470 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CH58_RS14475 PF01722 BolA-like protein CH58_RS14480 PF13466 STAS domain CH58_RS14485 PF05494 MlaC protein CH58_RS14490 PF02470 MlaD protein CH58_RS14495 PF02405 Permease MlaE CH58_RS14500 PF00005 ABC transporter CH58_RS14505 PF01699 Sodium/calcium exchanger protein CH58_RS14510 PF00571 CBS domain CH58_RS14510 PF01380 SIS domain CH58_RS14520 PF06835 Lipopolysaccharide-assembly, LptC-related CH58_RS14525 PF03968 OstA-like protein CH58_RS14530 PF12399 Branched-chain amino acid ATP-binding cassette transporter CH58_RS14530 PF00005 ABC transporter CH58_RS14535 PF00309 Sigma-54 factor, Activator interacting domain (AID) CH58_RS14535 PF04963 Sigma-54 factor, core binding domain CH58_RS14535 PF04552 Sigma-54, DNA binding domain CH58_RS14545 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CH58_RS14550 PF03668 P-loop ATPase protein family CH58_RS14555 PF00381 PTS HPr component phosphorylation site CH58_RS14560 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CH58_RS14560 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CH58_RS14565 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain CH58_RS14565 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain CH58_RS14570 PF01042 Endoribonuclease L-PSP CH58_RS14580 PF00356 Bacterial regulatory proteins, lacI family CH58_RS14585 PF00367 phosphotransferase system, EIIB CH58_RS14585 PF02378 Phosphotransferase system, EIIC CH58_RS14590 PF11941 Domain of unknown function (DUF3459) CH58_RS14590 PF00128 Alpha amylase, catalytic domain CH58_RS14595 PF01272 Transcription elongation factor, GreA/GreB, C-term CH58_RS14595 PF14760 Rnk N-terminus CH58_RS14600 PF07361 Cytochrome b562 CH58_RS14610 PF01523 Putative modulator of DNA gyrase CH58_RS14615 PF04751 Protein of unknown function (DUF615) CH58_RS14620 PF01337 Barstar (barnase inhibitor) CH58_RS14630 PF00171 Aldehyde dehydrogenase family CH58_RS14635 PF00171 Aldehyde dehydrogenase family CH58_RS14640 PF04632 Fusaric acid resistance protein family CH58_RS14645 PF13533 Biotin-lipoyl like CH58_RS14650 PF07869 Protein of unknown function (DUF1656) CH58_RS14655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH58_RS14655 PF03466 LysR substrate binding domain CH58_RS14675 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain CH58_RS14675 PF18413 Neuraminidase-like domain CH58_RS14680 PF12255 Insecticide toxin TcdB middle/C-terminal region CH58_RS14680 PF03534 Salmonella virulence plasmid 65kDa B protein CH58_RS14680 PF12256 Insecticide toxin TcdB middle/N-terminal region CH58_RS14705 PF05785 Rho-activating domain of cytotoxic necrotizing factor CH58_RS14705 PF18807 Tripartite Tc toxins repeat CH58_RS14710 PF14431 YwqJ-like deaminase CH58_RS14710 PF18807 Tripartite Tc toxins repeat CH58_RS14715 PF01523 Putative modulator of DNA gyrase CH58_RS14720 PF00795 Carbon-nitrogen hydrolase CH58_RS14725 PF13116 Protein of unknown function CH58_RS14725 PF13502 AsmA-like C-terminal region CH58_RS14730 PF00575 S1 RNA binding domain CH58_RS14730 PF10150 Ribonuclease E/G family CH58_RS14735 PF02545 Maf-like protein CH58_RS14740 PF04093 rod shape-determining protein MreD CH58_RS14745 PF04085 rod shape-determining protein MreC CH58_RS14755 PF00563 EAL domain CH58_RS14755 PF00990 Diguanylate cyclase, GGDEF domain CH58_RS14755 PF17157 Gammaproteobacterial periplasmic sensor domain CH58_RS14760 PF00107 Zinc-binding dehydrogenase CH58_RS14760 PF08240 Alcohol dehydrogenase GroES-like domain CH58_RS14765 PF00174 Oxidoreductase molybdopterin binding domain CH58_RS14770 PF01794 Ferric reductase like transmembrane component CH58_RS14775 PF01220 Dehydroquinase class II CH58_RS14780 PF00364 Biotin-requiring enzyme CH58_RS14785 PF02785 Biotin carboxylase C-terminal domain CH58_RS14785 PF00289 Biotin carboxylase, N-terminal domain CH58_RS14785 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CH58_RS14790 PF06196 Protein of unknown function (DUF997) CH58_RS14795 PF00474 Sodium:solute symporter family CH58_RS14805 PF01207 Dihydrouridine synthase (Dus) CH58_RS14810 PF02954 Bacterial regulatory protein, Fis family CH58_RS14830 PF07690 Major Facilitator Superfamily CH58_RS14835 PF02627 Carboxymuconolactone decarboxylase family CH58_RS14840 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CH58_RS14840 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CH58_RS14845 PF00753 Metallo-beta-lactamase superfamily CH58_RS14850 PF05433 Glycine zipper 2TM domain CH58_RS14860 PF00313 'Cold-shock' DNA-binding domain CH58_RS14865 PF00313 'Cold-shock' DNA-binding domain CH58_RS14870 PF01797 Transposase IS200 like CH58_RS14890 PF02798 Glutathione S-transferase, N-terminal domain CH58_RS14895 PF01380 SIS domain CH58_RS14895 PF00571 CBS domain CH58_RS14900 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CH58_RS14900 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CH58_RS14910 PF02653 Branched-chain amino acid transport system / permease component CH58_RS14915 PF00005 ABC transporter CH58_RS14925 PF03279 Bacterial lipid A biosynthesis acyltransferase CH58_RS14935 PF00999 Sodium/hydrogen exchanger family CH58_RS14940 PF00860 Permease family CH58_RS14945 PF04221 RelB antitoxin CH58_RS14950 PF00005 ABC transporter CH58_RS14955 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS14960 PF00296 Luciferase-like monooxygenase CH58_RS14965 PF09084 NMT1/THI5 like CH58_RS14970 PF03358 NADPH-dependent FMN reductase CH58_RS14975 PF01791 DeoC/LacD family aldolase CH58_RS14980 PF00294 pfkB family carbohydrate kinase CH58_RS14985 PF05025 RbsD / FucU transport protein family CH58_RS14990 PF12833 Helix-turn-helix domain CH58_RS14990 PF02311 AraC-like ligand binding domain CH58_RS14995 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CH58_RS14995 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CH58_RS15005 PF01695 IstB-like ATP binding protein CH58_RS15030 PF00009 Elongation factor Tu GTP binding domain CH58_RS15030 PF03144 Elongation factor Tu domain 2 CH58_RS15030 PF03143 Elongation factor Tu C-terminal domain CH58_RS15035 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CH58_RS15040 PF00467 KOW motif CH58_RS15040 PF02357 Transcription termination factor nusG CH58_RS15045 PF00298 Ribosomal protein L11, RNA binding domain CH58_RS15045 PF03946 Ribosomal protein L11, N-terminal domain CH58_RS15050 PF00687 Ribosomal protein L1p/L10e family CH58_RS15055 PF00466 Ribosomal protein L10 CH58_RS15060 PF16320 Ribosomal protein L7/L12 dimerisation domain CH58_RS15060 PF00542 Ribosomal protein L7/L12 C-terminal domain CH58_RS15065 PF10385 RNA polymerase beta subunit external 1 domain CH58_RS15065 PF04561 RNA polymerase Rpb2, domain 2 CH58_RS15065 PF00562 RNA polymerase Rpb2, domain 6 CH58_RS15065 PF04563 RNA polymerase beta subunit CH58_RS15065 PF04565 RNA polymerase Rpb2, domain 3 CH58_RS15065 PF04560 RNA polymerase Rpb2, domain 7 CH58_RS15070 PF05000 RNA polymerase Rpb1, domain 4 CH58_RS15070 PF04998 RNA polymerase Rpb1, domain 5 CH58_RS15070 PF04983 RNA polymerase Rpb1, domain 3 CH58_RS15070 PF00623 RNA polymerase Rpb1, domain 2 CH58_RS15070 PF04997 RNA polymerase Rpb1, domain 1 CH58_RS15075 PF01797 Transposase IS200 like CH58_RS15090 PF04055 Radical SAM superfamily CH58_RS15090 PF06968 Biotin and Thiamin Synthesis associated domain CH58_RS15095 PF05690 Thiazole biosynthesis protein ThiG CH58_RS15105 PF00899 ThiF family CH58_RS15110 PF02581 Thiamine monophosphate synthase CH58_RS15115 PF13667 ThiC-associated domain CH58_RS15115 PF01964 Radical SAM ThiC family CH58_RS15125 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ CH58_RS15130 PF00293 NUDIX domain CH58_RS15130 PF09297 NADH pyrophosphatase zinc ribbon domain CH58_RS15140 PF01208 Uroporphyrinogen decarboxylase (URO-D) CH58_RS15145 PF04493 Endonuclease V CH58_RS15150 PF04222 Protein of unknown function (DUF416) CH58_RS15155 PF00216 Bacterial DNA-binding protein CH58_RS15160 PF07356 Protein of unknown function (DUF1481) CH58_RS15165 PF02844 Phosphoribosylglycinamide synthetase, N domain CH58_RS15165 PF02843 Phosphoribosylglycinamide synthetase, C domain CH58_RS15165 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CH58_RS15170 PF01808 AICARFT/IMPCHase bienzyme CH58_RS15170 PF02142 MGS-like domain CH58_RS15205 PF01527 Transposase CH58_RS15210 PF13276 HTH-like domain CH58_RS15210 PF13683 Integrase core domain CH58_RS15215 PF01695 IstB-like ATP binding protein CH58_RS15220 PF00665 Integrase core domain CH58_RS15220 PF02796 Helix-turn-helix domain of resolvase CH58_RS15225 PF00665 Integrase core domain CH58_RS15225 PF02796 Helix-turn-helix domain of resolvase CH58_RS15230 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath CH58_RS15245 PF05947 Type VI secretion system, TssF CH58_RS15255 PF10431 C-terminal, D2-small domain, of ClpB protein CH58_RS15255 PF17871 AAA lid domain CH58_RS15255 PF07724 AAA domain (Cdc48 subfamily) CH58_RS15255 PF00004 ATPase family associated with various cellular activities (AAA) CH58_RS15260 PF06715 Gp5 C-terminal repeat (3 copies) CH58_RS15260 PF04717 Type VI secretion system, phage-baseplate injector CH58_RS15295 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE CH58_RS15300 PF00691 OmpA family CH58_RS15300 PF05736 OprF membrane domain CH58_RS15305 PF14331 ImcF-related N-terminal domain CH58_RS15305 PF06744 Type VI secretion protein IcmF C-terminal CH58_RS15305 PF06761 Intracellular multiplication and human macrophage-killing CH58_RS15315 PF00271 Helicase conserved C-terminal domain CH58_RS15315 PF12137 RNA polymerase recycling family C-terminal CH58_RS15315 PF00176 SNF2 family N-terminal domain CH58_RS15315 PF18339 RapA N-terminal Tudor like domain 1 CH58_RS15315 PF18337 RapA N-terminal Tudor like domain CH58_RS15320 PF03104 DNA polymerase family B, exonuclease domain CH58_RS15320 PF00136 DNA polymerase family B CH58_RS15325 PF09335 SNARE associated Golgi protein CH58_RS15330 PF00005 ABC transporter CH58_RS15335 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS15350 PF12793 Sugar transport-related sRNA regulator N-term CH58_RS15350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CH58_RS15360 PF07690 Major Facilitator Superfamily CH58_RS15365 PF01695 IstB-like ATP binding protein CH58_RS15370 PF02796 Helix-turn-helix domain of resolvase CH58_RS15370 PF00665 Integrase core domain CH58_RS15375 PF07690 Major Facilitator Superfamily CH58_RS15380 PF00694 Aconitase C-terminal domain CH58_RS15385 PF00330 Aconitase family (aconitate hydratase) CH58_RS15390 PF00180 Isocitrate/isopropylmalate dehydrogenase CH58_RS15395 PF00682 HMGL-like CH58_RS15395 PF08502 LeuA allosteric (dimerisation) domain CH58_RS15400 PF01797 Transposase IS200 like CH58_RS15410 PF03466 LysR substrate binding domain CH58_RS15410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH58_RS15420 PF00501 AMP-binding enzyme CH58_RS15430 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CH58_RS15430 PF00205 Thiamine pyrophosphate enzyme, central domain CH58_RS15430 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CH58_RS15435 PF10369 Small subunit of acetolactate synthase CH58_RS15440 PF01797 Transposase IS200 like CH58_RS15450 PF00356 Bacterial regulatory proteins, lacI family CH58_RS15450 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CH58_RS15455 PF06610 L-alanine exporter CH58_RS15460 PF02381 MraZ protein, putative antitoxin-like CH58_RS15465 PF01795 MraW methylase family CH58_RS15470 PF04999 Cell division protein FtsL CH58_RS15475 PF03717 Penicillin-binding Protein dimerisation domain CH58_RS15475 PF00905 Penicillin binding protein transpeptidase domain CH58_RS15480 PF08245 Mur ligase middle domain CH58_RS15480 PF02875 Mur ligase family, glutamate ligase domain CH58_RS15480 PF01225 Mur ligase family, catalytic domain CH58_RS15485 PF02875 Mur ligase family, glutamate ligase domain CH58_RS15485 PF01225 Mur ligase family, catalytic domain CH58_RS15485 PF08245 Mur ligase middle domain CH58_RS15490 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CH58_RS15490 PF00953 Glycosyl transferase family 4 CH58_RS15495 PF02875 Mur ligase family, glutamate ligase domain CH58_RS15495 PF08245 Mur ligase middle domain CH58_RS15500 PF01098 Cell cycle protein CH58_RS15505 PF03033 Glycosyltransferase family 28 N-terminal domain CH58_RS15505 PF04101 Glycosyltransferase family 28 C-terminal domain CH58_RS15510 PF08245 Mur ligase middle domain CH58_RS15510 PF01225 Mur ligase family, catalytic domain CH58_RS15510 PF02875 Mur ligase family, glutamate ligase domain CH58_RS15515 PF01820 D-ala D-ala ligase N-terminus CH58_RS15515 PF07478 D-ala D-ala ligase C-terminus CH58_RS15520 PF08478 POTRA domain, FtsQ-type CH58_RS15520 PF03799 Cell division protein FtsQ CH58_RS15525 PF02491 SHS2 domain inserted in FTSA CH58_RS15530 PF12327 FtsZ family, C-terminal domain CH58_RS15530 PF00091 Tubulin/FtsZ family, GTPase domain CH58_RS15535 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CH58_RS15545 PF06558 Secretion monitor precursor protein (SecM) CH58_RS15550 PF01043 SecA preprotein cross-linking domain CH58_RS15550 PF07516 SecA Wing and Scaffold domain CH58_RS15550 PF07517 SecA DEAD-like domain CH58_RS15550 PF02810 SEC-C motif CH58_RS15555 PF00293 NUDIX domain CH58_RS15560 PF01695 IstB-like ATP binding protein CH58_RS15565 PF00665 Integrase core domain CH58_RS15565 PF02796 Helix-turn-helix domain of resolvase CH58_RS15610 PF04204 Homoserine O-succinyltransferase CH58_RS15615 PF01274 Malate synthase CH58_RS15620 PF00463 Isocitrate lyase family CH58_RS15625 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) CH58_RS15630 PF09339 IclR helix-turn-helix domain CH58_RS15630 PF01614 Bacterial transcriptional regulator CH58_RS15635 PF01614 Bacterial transcriptional regulator CH58_RS15635 PF09339 IclR helix-turn-helix domain CH58_RS15640 PF02965 Vitamin B12 dependent methionine synthase, activation domain CH58_RS15640 PF02607 B12 binding domain CH58_RS15640 PF02574 Homocysteine S-methyltransferase CH58_RS15640 PF00809 Pterin binding enzyme CH58_RS15640 PF02310 B12 binding domain CH58_RS15645 PF13332 Hemagglutinin repeat CH58_RS15645 PF05860 haemagglutination activity domain CH58_RS15650 PF08479 POTRA domain, ShlB-type CH58_RS15650 PF17287 POTRA domain CH58_RS15650 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CH58_RS15655 PF00696 Amino acid kinase family CH58_RS15655 PF01842 ACT domain CH58_RS15660 PF00342 Phosphoglucose isomerase CH58_RS15665 PF06146 Phosphate-starvation-inducible E CH58_RS15670 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS15675 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS15675 PF14785 Maltose transport system permease protein MalF P2 domain CH58_RS15680 PF01547 Bacterial extracellular solute-binding protein CH58_RS15690 PF00005 ABC transporter CH58_RS15690 PF17912 MalK OB fold domain CH58_RS15695 PF02264 LamB porin CH58_RS15700 PF07148 Maltose operon periplasmic protein precursor (MalM) CH58_RS15710 PF05638 Type VI secretion system effector, Hcp CH58_RS15720 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath CH58_RS15730 PF05947 Type VI secretion system, TssF CH58_RS15735 PF13333 Integrase core domain CH58_RS15735 PF00665 Integrase core domain CH58_RS15735 PF13276 HTH-like domain CH58_RS15745 PF00312 Ribosomal protein S15 CH58_RS15750 PF16198 tRNA pseudouridylate synthase B C-terminal domain CH58_RS15750 PF01509 TruB family pseudouridylate synthase (N terminal domain) CH58_RS15750 PF09157 Pseudouridine synthase II TruB, C-terminal CH58_RS15755 PF02033 Ribosome-binding factor A CH58_RS15760 PF11987 Translation-initiation factor 2 CH58_RS15760 PF08364 Bacterial translation initiation factor IF-2 associated region CH58_RS15760 PF04760 Translation initiation factor IF-2, N-terminal region CH58_RS15760 PF03144 Elongation factor Tu domain 2 CH58_RS15760 PF00009 Elongation factor Tu GTP binding domain CH58_RS15765 PF13184 NusA-like KH domain CH58_RS15765 PF08529 NusA N-terminal domain CH58_RS15765 PF00575 S1 RNA binding domain CH58_RS15770 PF17384 RimP C-terminal SH3 domain CH58_RS15770 PF02576 RimP N-terminal domain CH58_RS15785 PF03840 Preprotein translocase SecG subunit CH58_RS15790 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CH58_RS15790 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CH58_RS15790 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CH58_RS15790 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CH58_RS15795 PF00809 Pterin binding enzyme CH58_RS15800 PF06480 FtsH Extracellular CH58_RS15800 PF00004 ATPase family associated with various cellular activities (AAA) CH58_RS15800 PF17862 AAA+ lid domain CH58_RS15800 PF01434 Peptidase family M41 CH58_RS15805 PF01728 FtsJ-like methyltransferase CH58_RS15810 PF01985 CRS1 / YhbY (CRM) domain CH58_RS15815 PF01272 Transcription elongation factor, GreA/GreB, C-term CH58_RS15815 PF03449 Transcription elongation factor, N-terminal CH58_RS15820 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CH58_RS15825 PF00072 Response regulator receiver domain CH58_RS15825 PF00486 Transcriptional regulatory protein, C terminal CH58_RS15830 PF00512 His Kinase A (phospho-acceptor) domain CH58_RS15830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH58_RS15830 PF00672 HAMP domain CH58_RS15835 PF01018 GTP1/OBG CH58_RS15835 PF01926 50S ribosome-binding GTPase CH58_RS15840 PF00892 EamA-like transporter family CH58_RS15845 PF01016 Ribosomal L27 protein CH58_RS15850 PF00829 Ribosomal prokaryotic L21 protein CH58_RS15855 PF00348 Polyprenyl synthetase CH58_RS15865 PF13693 Winged helix-turn-helix DNA-binding CH58_RS15870 PF00056 lactate/malate dehydrogenase, NAD binding domain CH58_RS15870 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CH58_RS15875 PF01316 Arginine repressor, DNA binding domain CH58_RS15875 PF02863 Arginine repressor, C-terminal domain CH58_RS15890 PF01225 Mur ligase family, catalytic domain CH58_RS15890 PF02875 Mur ligase family, glutamate ligase domain CH58_RS15890 PF08245 Mur ligase middle domain CH58_RS15895 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CH58_RS15900 PF00719 Inorganic pyrophosphatase CH58_RS15905 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like CH58_RS15910 PF04357 TamB, inner membrane protein subunit of TAM complex CH58_RS15915 PF01103 Surface antigen CH58_RS15915 PF07244 Surface antigen variable number repeat CH58_RS15915 PF17243 POTRA domain TamA domain 1 CH58_RS15920 PF01625 Peptide methionine sulfoxide reductase CH58_RS15925 PF01595 Cyclin M transmembrane N-terminal domain CH58_RS15925 PF03471 Transporter associated domain CH58_RS15925 PF00571 CBS domain CH58_RS15930 PF06526 Protein of unknown function (DUF1107) CH58_RS15935 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) CH58_RS15940 PF00459 Inositol monophosphatase family CH58_RS15945 PF02872 5'-nucleotidase, C-terminal domain CH58_RS15945 PF00149 Calcineurin-like phosphoesterase CH58_RS15950 PF04405 Domain of Unknown function (DUF542) CH58_RS15950 PF01814 Hemerythrin HHE cation binding domain CH58_RS15955 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CH58_RS15955 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CH58_RS15960 PF08525 Opacity-associated protein A N-terminal motif CH58_RS15960 PF04225 Opacity-associated protein A LysM-like domain CH58_RS15970 PF01797 Transposase IS200 like CH58_RS15980 PF03948 Ribosomal protein L9, C-terminal domain CH58_RS15980 PF01281 Ribosomal protein L9, N-terminal domain CH58_RS15985 PF01084 Ribosomal protein S18 CH58_RS15990 PF00436 Single-strand binding protein family CH58_RS15995 PF01250 Ribosomal protein S6 CH58_RS16005 PF00326 Prolyl oligopeptidase family CH58_RS16010 PF02796 Helix-turn-helix domain of resolvase CH58_RS16010 PF00665 Integrase core domain CH58_RS16015 PF01695 IstB-like ATP binding protein CH58_RS16020 PF00311 Phosphoenolpyruvate carboxylase CH58_RS16025 PF07687 Peptidase dimerisation domain CH58_RS16025 PF01546 Peptidase family M20/M25/M40 CH58_RS16030 PF01118 Semialdehyde dehydrogenase, NAD binding domain CH58_RS16030 PF02774 Semialdehyde dehydrogenase, dimerisation domain CH58_RS16035 PF00696 Amino acid kinase family CH58_RS16040 PF00206 Lyase CH58_RS16040 PF14698 Argininosuccinate lyase C-terminal CH58_RS16050 PF07715 TonB-dependent Receptor Plug Domain CH58_RS16050 PF00593 TonB dependent receptor CH58_RS16060 PF00664 ABC transporter transmembrane region CH58_RS16060 PF00005 ABC transporter CH58_RS16065 PF00529 HlyD membrane-fusion protein of T1SS CH58_RS16070 PF03544 Gram-negative bacterial TonB protein C-terminal CH58_RS16075 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CH58_RS16075 PF07992 Pyridine nucleotide-disulphide oxidoreductase CH58_RS16080 PF08534 Redoxin CH58_RS16080 PF00462 Glutaredoxin CH58_RS16085 PF03466 LysR substrate binding domain CH58_RS16085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH58_RS16090 PF07992 Pyridine nucleotide-disulphide oxidoreductase CH58_RS16090 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CH58_RS16095 PF00440 Bacterial regulatory proteins, tetR family CH58_RS16100 PF07226 Protein of unknown function (DUF1422) CH58_RS16105 PF05958 tRNA (Uracil-5-)-methyltransferase CH58_RS16115 PF07715 TonB-dependent Receptor Plug Domain CH58_RS16115 PF00593 TonB dependent receptor CH58_RS16120 PF01177 Asp/Glu/Hydantoin racemase CH58_RS16160 PF13407 Periplasmic binding protein domain CH58_RS16165 PF00005 ABC transporter CH58_RS16170 PF02653 Branched-chain amino acid transport system / permease component CH58_RS16175 PF02653 Branched-chain amino acid transport system / permease component CH58_RS16180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH58_RS16180 PF03466 LysR substrate binding domain CH58_RS16185 PF04219 Protein of unknown function, DUF CH58_RS16190 PF01078 Magnesium chelatase, subunit ChlI CH58_RS16190 PF13335 Magnesium chelatase, subunit ChlI C-terminal CH58_RS16195 PF00205 Thiamine pyrophosphate enzyme, central domain CH58_RS16195 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CH58_RS16195 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CH58_RS16205 PF01063 Amino-transferase class IV CH58_RS16210 PF00920 Dehydratase family CH58_RS16215 PF00291 Pyridoxal-phosphate dependent enzyme CH58_RS16215 PF00585 C-terminal regulatory domain of Threonine dehydratase CH58_RS16245 PF03466 LysR substrate binding domain CH58_RS16245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH58_RS16250 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CH58_RS16250 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CH58_RS16275 PF01320 Colicin immunity protein / pyocin immunity protein CH58_RS16285 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CH58_RS16285 PF02753 Pili assembly chaperone PapD, C-terminal domain CH58_RS16295 PF00577 Outer membrane usher protein CH58_RS16295 PF13954 PapC N-terminal domain CH58_RS16295 PF13953 PapC C-terminal domain CH58_RS16300 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CH58_RS16300 PF02753 Pili assembly chaperone PapD, C-terminal domain CH58_RS16315 PF00872 Transposase, Mutator family CH58_RS16335 PF13361 UvrD-like helicase C-terminal domain CH58_RS16335 PF00580 UvrD/REP helicase N-terminal domain CH58_RS16340 PF02541 Ppx/GppA phosphatase family CH58_RS16345 PF02541 Ppx/GppA phosphatase family CH58_RS16350 PF00270 DEAD/DEAH box helicase CH58_RS16350 PF00271 Helicase conserved C-terminal domain CH58_RS16355 PF00085 Thioredoxin CH58_RS16360 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CH58_RS16360 PF07498 Rho termination factor, N-terminal domain CH58_RS16360 PF07497 Rho termination factor, RNA-binding domain CH58_RS16365 PF00953 Glycosyl transferase family 4 CH58_RS16370 PF02706 Chain length determinant protein CH58_RS16375 PF02350 UDP-N-acetylglucosamine 2-epimerase CH58_RS16380 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CH58_RS16380 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CH58_RS16380 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CH58_RS16385 PF16363 GDP-mannose 4,6 dehydratase CH58_RS16390 PF00483 Nucleotidyl transferase CH58_RS16400 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CH58_RS16405 PF01943 Polysaccharide biosynthesis protein CH58_RS16410 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 CH58_RS16415 PF06899 WzyE protein, O-antigen assembly polymerase CH58_RS16420 PF03808 Glycosyl transferase WecB/TagA/CpsF family CH58_RS16425 PF00324 Amino acid permease CH58_RS16450 PF02796 Helix-turn-helix domain of resolvase CH58_RS16450 PF00665 Integrase core domain CH58_RS16455 PF01695 IstB-like ATP binding protein CH58_RS16460 PF01797 Transposase IS200 like CH58_RS16465 PF07719 Tetratricopeptide repeat CH58_RS16465 PF07219 HemY protein N-terminus CH58_RS16470 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase CH58_RS16475 PF02602 Uroporphyrinogen-III synthase HemD CH58_RS16480 PF03900 Porphobilinogen deaminase, C-terminal domain CH58_RS16480 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CH58_RS16490 PF12633 Adenylate cyclase NT domain CH58_RS16490 PF01295 Adenylate cyclase, class-I CH58_RS16495 PF01491 Frataxin-like domain CH58_RS16500 PF13627 Prokaryotic lipoprotein-attachment site CH58_RS16505 PF01678 Diaminopimelate epimerase CH58_RS16510 PF04340 Protein of unknown function, DUF484 CH58_RS16515 PF02899 Phage integrase, N-terminal SAM-like domain CH58_RS16515 PF00589 Phage integrase family CH58_RS16520 PF13419 Haloacid dehalogenase-like hydrolase CH58_RS16525 PF00580 UvrD/REP helicase N-terminal domain CH58_RS16525 PF13361 UvrD-like helicase C-terminal domain CH58_RS16540 PF09370 Phosphoenolpyruvate hydrolase-like CH58_RS16545 PF01544 CorA-like Mg2+ transporter protein CH58_RS16550 PF00892 EamA-like transporter family CH58_RS16555 PF03061 Thioesterase superfamily CH58_RS16560 PF02253 Phospholipase A1 CH58_RS16565 PF00271 Helicase conserved C-terminal domain CH58_RS16565 PF16124 RecQ zinc-binding CH58_RS16565 PF00270 DEAD/DEAH box helicase CH58_RS16565 PF00570 HRDC domain CH58_RS16565 PF09382 RQC domain CH58_RS16570 PF01810 LysE type translocator CH58_RS16575 PF01810 LysE type translocator CH58_RS16580 PF12146 Serine aminopeptidase, S33 CH58_RS16595 PF03009 Glycerophosphoryl diester phosphodiesterase family CH58_RS16605 PF01266 FAD dependent oxidoreductase CH58_RS16605 PF04324 BFD-like [2Fe-2S] binding domain CH58_RS16610 PF00890 FAD binding domain CH58_RS16615 PF02754 Cysteine-rich domain CH58_RS16615 PF13183 4Fe-4S dicluster domain CH58_RS16620 PF08786 DcrB CH58_RS16625 PF02592 Putative vitamin uptake transporter CH58_RS16630 PF01206 Sulfurtransferase TusA CH58_RS16635 PF00403 Heavy-metal-associated domain CH58_RS16655 PF06611 Protein of unknown function (DUF1145) CH58_RS16670 PF00448 SRP54-type protein, GTPase domain CH58_RS16670 PF02881 SRP54-type protein, helical bundle domain CH58_RS16670 PF00448 SRP54-type protein, GTPase domain CH58_RS16670 PF02881 SRP54-type protein, helical bundle domain CH58_RS16675 PF00005 ABC transporter CH58_RS16680 PF02687 FtsX-like permease family CH58_RS16680 PF18075 FtsX extracellular domain CH58_RS16685 PF00140 Sigma-70 factor, region 1.2 CH58_RS16685 PF04542 Sigma-70 region 2 CH58_RS16685 PF04545 Sigma-70, region 4 CH58_RS16695 PF01797 Transposase IS200 like CH58_RS16700 PF12568 Acetyltransferase (GNAT) domain, PanZ CH58_RS16705 PF13458 Periplasmic binding protein CH58_RS16710 PF01695 IstB-like ATP binding protein CH58_RS16715 PF00665 Integrase core domain CH58_RS16715 PF02796 Helix-turn-helix domain of resolvase CH58_RS16720 PF02653 Branched-chain amino acid transport system / permease component CH58_RS16725 PF11862 Domain of unknown function (DUF3382) CH58_RS16725 PF02653 Branched-chain amino acid transport system / permease component CH58_RS16730 PF00005 ABC transporter CH58_RS16730 PF12399 Branched-chain amino acid ATP-binding cassette transporter CH58_RS16735 PF00005 ABC transporter CH58_RS16775 PF13416 Bacterial extracellular solute-binding protein CH58_RS16780 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS16785 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS16790 PF00005 ABC transporter CH58_RS16790 PF17912 MalK OB fold domain CH58_RS16795 PF03009 Glycerophosphoryl diester phosphodiesterase family CH58_RS16800 PF03547 Membrane transport protein CH58_RS16805 PF00892 EamA-like transporter family CH58_RS16810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH58_RS16810 PF03466 LysR substrate binding domain CH58_RS16815 PF08267 Cobalamin-independent synthase, N-terminal domain CH58_RS16815 PF01717 Cobalamin-independent synthase, Catalytic domain CH58_RS16820 PF01738 Dienelactone hydrolase family CH58_RS16825 PF01048 Phosphorylase superfamily CH58_RS16835 PF13722 5TM C-terminal transporter carbon starvation CstA CH58_RS16835 PF02554 Carbon starvation protein CstA CH58_RS16840 PF09335 SNARE associated Golgi protein CH58_RS16845 PF02646 RmuC family CH58_RS16850 PF01209 ubiE/COQ5 methyltransferase family CH58_RS16855 PF02036 SCP-2 sterol transfer family CH58_RS16860 PF03109 ABC1 family CH58_RS16865 PF02416 mttA/Hcf106 family CH58_RS16875 PF00902 Sec-independent protein translocase protein (TatC) CH58_RS16880 PF01026 TatD related DNase CH58_RS16885 PF00665 Integrase core domain CH58_RS16885 PF02796 Helix-turn-helix domain of resolvase CH58_RS16890 PF01695 IstB-like ATP binding protein CH58_RS16900 PF03737 Aldolase/RraA CH58_RS16905 PF01040 UbiA prenyltransferase family CH58_RS16910 PF10431 C-terminal, D2-small domain, of ClpB protein CH58_RS16910 PF00004 ATPase family associated with various cellular activities (AAA) CH58_RS16910 PF07724 AAA domain (Cdc48 subfamily) CH58_RS16915 PF00227 Proteasome subunit CH58_RS16920 PF05036 Sporulation related domain CH58_RS16925 PF00356 Bacterial regulatory proteins, lacI family CH58_RS16935 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CH58_RS16935 PF18074 Primosomal protein N C-terminal domain CH58_RS16935 PF17764 3′ DNA-binding domain (3′BD) CH58_RS16935 PF00271 Helicase conserved C-terminal domain CH58_RS16935 PF00270 DEAD/DEAH box helicase CH58_RS16940 PF01197 Ribosomal protein L31 CH58_RS16945 PF05360 yiaA/B two helix domain CH58_RS16955 PF01340 Met Apo-repressor, MetJ CH58_RS16965 PF00696 Amino acid kinase family CH58_RS16965 PF00742 Homoserine dehydrogenase CH58_RS16965 PF03447 Homoserine dehydrogenase, NAD binding domain CH58_RS16970 PF02219 Methylenetetrahydrofolate reductase CH58_RS16975 PF13333 Integrase core domain CH58_RS16975 PF00665 Integrase core domain CH58_RS16975 PF13276 HTH-like domain CH58_RS16990 PF00593 TonB dependent receptor CH58_RS16990 PF07715 TonB-dependent Receptor Plug Domain CH58_RS16995 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) CH58_RS17000 PF06276 Ferric iron reductase FhuF-like transporter CH58_RS17000 PF04183 IucA / IucC family CH58_RS17010 PF06276 Ferric iron reductase FhuF-like transporter CH58_RS17010 PF04183 IucA / IucC family CH58_RS17015 PF06276 Ferric iron reductase FhuF-like transporter CH58_RS17015 PF04183 IucA / IucC family CH58_RS17035 PF00196 Bacterial regulatory proteins, luxR family CH58_RS17035 PF03472 Autoinducer binding domain CH58_RS17040 PF00765 Autoinducer synthase CH58_RS17045 PF02517 CPBP intramembrane metalloprotease CH58_RS17055 PF03811 InsA N-terminal domain CH58_RS17055 PF12759 InsA C-terminal domain CH58_RS17075 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath CH58_RS17090 PF05736 OprF membrane domain CH58_RS17090 PF00691 OmpA family CH58_RS17100 PF07724 AAA domain (Cdc48 subfamily) CH58_RS17100 PF00004 ATPase family associated with various cellular activities (AAA) CH58_RS17100 PF10431 C-terminal, D2-small domain, of ClpB protein CH58_RS17100 PF17871 AAA lid domain CH58_RS17105 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) CH58_RS17105 PF04717 Type VI secretion system, phage-baseplate injector CH58_RS17105 PF13296 Putative type VI secretion system Rhs element Vgr CH58_RS17125 PF03811 InsA N-terminal domain CH58_RS17125 PF12759 InsA C-terminal domain CH58_RS17150 PF12759 InsA C-terminal domain CH58_RS17150 PF03811 InsA N-terminal domain CH58_RS17155 PF03400 IS1 transposase CH58_RS17165 PF02899 Phage integrase, N-terminal SAM-like domain CH58_RS17165 PF00589 Phage integrase family CH58_RS17175 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CH58_RS17175 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CH58_RS17175 PF01276 Orn/Lys/Arg decarboxylase, major domain CH58_RS17180 PF13407 Periplasmic binding protein domain CH58_RS17185 PF00005 ABC transporter CH58_RS17190 PF02653 Branched-chain amino acid transport system / permease component CH58_RS17195 PF07715 TonB-dependent Receptor Plug Domain CH58_RS17205 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain CH58_RS17205 PF01464 Transglycosylase SLT domain CH58_RS17210 PF04362 Bacterial Fe(2+) trafficking CH58_RS17215 PF00730 HhH-GPD superfamily base excision DNA repair protein CH58_RS17215 PF14815 NUDIX domain CH58_RS17215 PF00633 Helix-hairpin-helix motif CH58_RS17215 PF10576 Iron-sulfur binding domain of endonuclease III CH58_RS17220 PF02390 Putative methyltransferase CH58_RS17225 PF04320 Protein with unknown function (DUF469) CH58_RS17230 PF04960 Glutaminase CH58_RS17235 PF11101 Protein of unknown function (DUF2884) CH58_RS17240 PF11101 Protein of unknown function (DUF2884) CH58_RS17250 PF06969 HemN C-terminal domain CH58_RS17250 PF04055 Radical SAM superfamily CH58_RS17255 PF01725 Ham1 family CH58_RS17260 PF02594 Uncharacterised ACR, YggU family COG1872 CH58_RS17265 PF02325 YGGT family CH58_RS17270 PF14748 Pyrroline-5-carboxylate reductase dimerisation CH58_RS17270 PF03807 NADP oxidoreductase coenzyme F420-dependent CH58_RS17275 PF01168 Alanine racemase, N-terminal domain CH58_RS17280 PF00437 Type II/IV secretion system protein CH58_RS17285 PF04371 Porphyromonas-type peptidyl-arginine deiminase CH58_RS17290 PF00795 Carbon-nitrogen hydrolase CH58_RS17295 PF03652 Holliday junction resolvase CH58_RS17300 PF02622 Uncharacterized ACR, COG1678 CH58_RS17305 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CH58_RS17305 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CH58_RS17310 PF04452 RNA methyltransferase CH58_RS17315 PF04231 Endonuclease I CH58_RS17320 PF10263 SprT-like family CH58_RS17320 PF17283 SprT-like zinc ribbon domain CH58_RS17325 PF02773 S-adenosylmethionine synthetase, C-terminal domain CH58_RS17325 PF02772 S-adenosylmethionine synthetase, central domain CH58_RS17325 PF00438 S-adenosylmethionine synthetase, N-terminal domain CH58_RS17330 PF17810 Arginine decarboxylase helical bundle domain CH58_RS17330 PF17944 Arginine decarboxylase C-terminal helical extension CH58_RS17330 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CH58_RS17335 PF01797 Transposase IS200 like CH58_RS17345 PF01435 Peptidase family M48 CH58_RS17350 PF00456 Transketolase, thiamine diphosphate binding domain CH58_RS17350 PF02779 Transketolase, pyrimidine binding domain CH58_RS17350 PF02780 Transketolase, C-terminal domain CH58_RS17360 PF01797 Transposase IS200 like CH58_RS17365 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CH58_RS17365 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CH58_RS17370 PF00162 Phosphoglycerate kinase CH58_RS17375 PF01116 Fructose-bisphosphate aldolase class-II CH58_RS17385 PF05552 Conserved TM helix CH58_RS17385 PF00924 Mechanosensitive ion channel CH58_RS17390 PF01810 LysE type translocator CH58_RS17395 PF01695 IstB-like ATP binding protein CH58_RS17400 PF00665 Integrase core domain CH58_RS17400 PF02796 Helix-turn-helix domain of resolvase CH58_RS17405 PF01810 LysE type translocator CH58_RS17410 PF04402 Protein of unknown function (DUF541) CH58_RS17415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH58_RS17415 PF03466 LysR substrate binding domain CH58_RS17420 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CH58_RS17425 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CH58_RS17425 PF01842 ACT domain CH58_RS17425 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CH58_RS17430 PF01812 5-formyltetrahydrofolate cyclo-ligase family CH58_RS17435 PF05164 Cell division protein ZapA CH58_RS17440 PF03695 Uncharacterised protein family (UPF0149) CH58_RS17445 PF05195 Aminopeptidase P, N-terminal domain CH58_RS17445 PF00557 Metallopeptidase family M24 CH58_RS17450 PF01494 FAD binding domain CH58_RS17455 PF01494 FAD binding domain CH58_RS17460 PF08669 Glycine cleavage T-protein C-terminal barrel domain CH58_RS17460 PF01571 Aminomethyltransferase folate-binding domain CH58_RS17465 PF01597 Glycine cleavage H-protein CH58_RS17470 PF02347 Glycine cleavage system P-protein CH58_RS17485 PF05662 Coiled stalk of trimeric autotransporter adhesin CH58_RS17485 PF05658 Head domain of trimeric autotransporter adhesin CH58_RS17485 PF03895 YadA-like membrane anchor domain CH58_RS17485 PF13018 Extended Signal Peptide of Type V secretion system CH58_RS17495 PF03006 Haemolysin-III related CH58_RS17505 PF01571 Aminomethyltransferase folate-binding domain CH58_RS17510 PF03937 Flavinator of succinate dehydrogenase CH58_RS17515 PF07254 Membrane-bound toxin component of toxin-antitoxin system CH58_RS17520 PF00486 Transcriptional regulatory protein, C terminal CH58_RS17520 PF00072 Response regulator receiver domain CH58_RS17525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH58_RS17525 PF00512 His Kinase A (phospho-acceptor) domain CH58_RS17525 PF00672 HAMP domain CH58_RS17530 PF06123 Inner membrane protein CreD CH58_RS17535 PF00258 Flavodoxin CH58_RS17540 PF00589 Phage integrase family CH58_RS17540 PF02899 Phage integrase, N-terminal SAM-like domain CH58_RS17545 PF13098 Thioredoxin-like domain CH58_RS17545 PF10411 Disulfide bond isomerase protein N-terminus CH58_RS17550 PF17768 RecJ OB domain CH58_RS17550 PF02272 DHHA1 domain CH58_RS17550 PF01368 DHH family CH58_RS17555 PF00472 RF-1 domain CH58_RS17555 PF03462 PCRF domain CH58_RS17560 PF00152 tRNA synthetases class II (D, K and N) CH58_RS17560 PF01336 OB-fold nucleic acid binding domain CH58_RS17570 PF13356 Arm DNA-binding domain CH58_RS17570 PF00589 Phage integrase family CH58_RS17575 PF01695 IstB-like ATP binding protein CH58_RS17580 PF00665 Integrase core domain CH58_RS17580 PF02796 Helix-turn-helix domain of resolvase CH58_RS17585 PF00589 Phage integrase family CH58_RS17585 PF14659 Phage integrase, N-terminal SAM-like domain CH58_RS17585 PF13356 Arm DNA-binding domain CH58_RS17610 PF15723 Motility quorum-sensing regulator, toxin of MqsA CH58_RS17615 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA CH58_RS17710 PF03551 Transcriptional regulator PadR-like family CH58_RS17715 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family CH58_RS17725 PF13407 Periplasmic binding protein domain CH58_RS17730 PF02653 Branched-chain amino acid transport system / permease component CH58_RS17735 PF00005 ABC transporter CH58_RS17740 PF17912 MalK OB fold domain CH58_RS17740 PF00005 ABC transporter CH58_RS17745 PF13416 Bacterial extracellular solute-binding protein CH58_RS17750 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS17755 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS17760 PF07745 Glycosyl hydrolase family 53 CH58_RS17765 PF08532 Beta-galactosidase trimerisation domain CH58_RS17765 PF02449 Beta-galactosidase CH58_RS17765 PF08533 Beta-galactosidase C-terminal domain CH58_RS17770 PF00367 phosphotransferase system, EIIB CH58_RS17770 PF02378 Phosphotransferase system, EIIC CH58_RS17775 PF02264 LamB porin CH58_RS17780 PF00356 Bacterial regulatory proteins, lacI family CH58_RS17785 PF13802 Galactose mutarotase-like CH58_RS17785 PF17137 Domain of unknown function (DUF5110) CH58_RS17785 PF01055 Glycosyl hydrolases family 31 CH58_RS17785 PF16338 Domain of unknown function (DUF4968) CH58_RS17790 PF07690 Major Facilitator Superfamily CH58_RS17795 PF00356 Bacterial regulatory proteins, lacI family CH58_RS17810 PF01116 Fructose-bisphosphate aldolase class-II CH58_RS17820 PF00884 Sulfatase CH58_RS17825 PF13186 Iron-sulfur cluster-binding domain CH58_RS17825 PF04055 Radical SAM superfamily CH58_RS17830 PF07470 Glycosyl Hydrolase Family 88 CH58_RS17840 PF01979 Amidohydrolase family CH58_RS17845 PF03610 PTS system fructose IIA component CH58_RS17850 PF03613 PTS system mannose/fructose/sorbose family IID component CH58_RS17855 PF03609 PTS system sorbose-specific iic component CH58_RS17860 PF03830 PTS system sorbose subfamily IIB component CH58_RS17865 PF01380 SIS domain CH58_RS17870 PF08013 Tagatose 6 phosphate kinase CH58_RS17875 PF08220 DeoR-like helix-turn-helix domain CH58_RS17875 PF00455 DeoR C terminal sensor domain CH58_RS17880 PF00884 Sulfatase CH58_RS17885 PF01797 Transposase IS200 like CH58_RS17900 PF01695 IstB-like ATP binding protein CH58_RS17905 PF09092 Lyase, N terminal CH58_RS17905 PF02278 Polysaccharide lyase family 8, super-sandwich domain CH58_RS17905 PF09093 Lyase, catalytic CH58_RS17905 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain CH58_RS17930 PF00484 Carbonic anhydrase CH58_RS17945 PF03958 Bacterial type II/III secretion system short domain CH58_RS17945 PF00263 Bacterial type II and III secretion system protein CH58_RS17950 PF00437 Type II/IV secretion system protein CH58_RS17960 PF00482 Type II secretion system (T2SS), protein F CH58_RS17975 PF07963 Prokaryotic N-terminal methylation motif CH58_RS17975 PF11612 Type II secretion system (T2SS), protein J CH58_RS17995 PF06750 Bacterial Peptidase A24 N-terminal domain CH58_RS17995 PF01478 Type IV leader peptidase family CH58_RS18015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CH58_RS18015 PF02203 Tar ligand binding domain homologue CH58_RS18015 PF00672 HAMP domain CH58_RS18030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH58_RS18030 PF03466 LysR substrate binding domain CH58_RS18035 PF07690 Major Facilitator Superfamily CH58_RS18040 PF03466 LysR substrate binding domain CH58_RS18040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH58_RS18045 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CH58_RS18045 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CH58_RS18050 PF00356 Bacterial regulatory proteins, lacI family CH58_RS18055 PF00384 Molybdopterin oxidoreductase CH58_RS18055 PF01568 Molydopterin dinucleotide binding domain CH58_RS18060 PF00501 AMP-binding enzyme CH58_RS18060 PF13193 AMP-binding enzyme C-terminal domain CH58_RS18060 PF01553 Acyltransferase CH58_RS18065 PF07690 Major Facilitator Superfamily CH58_RS18080 PF00248 Aldo/keto reductase family CH58_RS18085 PF02976 DNA mismatch repair enzyme MutH CH58_RS18100 PF00293 NUDIX domain CH58_RS18105 PF01590 GAF domain CH58_RS18105 PF02896 PEP-utilising enzyme, TIM barrel domain CH58_RS18105 PF00391 PEP-utilising enzyme, mobile domain CH58_RS18105 PF05524 PEP-utilising enzyme, N-terminal CH58_RS18110 PF01790 Prolipoprotein diacylglyceryl transferase CH58_RS18115 PF00303 Thymidylate synthase CH58_RS18145 PF17946 RecC C-terminal domain CH58_RS18150 PF05193 Peptidase M16 inactive domain CH58_RS18150 PF00675 Insulinase (Peptidase family M16) CH58_RS18150 PF16187 Middle or third domain of peptidase_M16 CH58_RS18155 PF12705 PD-(D/E)XK nuclease superfamily CH58_RS18155 PF00580 UvrD/REP helicase N-terminal domain CH58_RS18155 PF13361 UvrD-like helicase C-terminal domain CH58_RS18160 PF13538 UvrD-like helicase C-terminal domain CH58_RS18165 PF00696 Amino acid kinase family CH58_RS18165 PF00583 Acetyltransferase (GNAT) family CH58_RS18170 PF11741 AMIN domain CH58_RS18170 PF01520 N-acetylmuramoyl-L-alanine amidase CH58_RS18185 PF06725 3D domain CH58_RS18185 PF03562 MltA specific insert domain CH58_RS18190 PF00899 ThiF family CH58_RS18195 PF02657 Fe-S metabolism associated domain CH58_RS18200 PF00266 Aminotransferase class-V CH58_RS18205 PF03466 LysR substrate binding domain CH58_RS18205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH58_RS18210 PF04241 Protein of unknown function (DUF423) CH58_RS18215 PF18125 RlmM ferredoxin-like domain CH58_RS18215 PF01728 FtsJ-like methyltransferase CH58_RS18220 PF01367 5'-3' exonuclease, C-terminal SAM fold CH58_RS18220 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CH58_RS18230 PF01695 IstB-like ATP binding protein CH58_RS18235 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CH58_RS18235 PF01367 5'-3' exonuclease, C-terminal SAM fold CH58_RS18240 PF03641 Possible lysine decarboxylase CH58_RS18240 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases CH58_RS18240 PF11892 Domain of unknown function (DUF3412) CH58_RS18245 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CH58_RS18245 PF14489 QueF-like protein CH58_RS18250 PF07348 Syd protein (SUKH-2) CH58_RS18255 PF01797 Transposase IS200 like CH58_RS18260 PF04287 tRNA pseudouridine synthase C CH58_RS18265 PF00849 RNA pseudouridylate synthase CH58_RS18270 PF00258 Flavodoxin CH58_RS18275 PF11944 Protein of unknown function (DUF3461) CH58_RS18280 PF00132 Bacterial transferase hexapeptide (six repeats) CH58_RS18280 PF14602 Hexapeptide repeat of succinyl-transferase CH58_RS18280 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CH58_RS18285 PF01966 HD domain CH58_RS18285 PF01842 ACT domain CH58_RS18285 PF08335 GlnD PII-uridylyltransferase CH58_RS18285 PF01909 Nucleotidyltransferase domain CH58_RS18290 PF00557 Metallopeptidase family M24 CH58_RS18295 PF00318 Ribosomal protein S2 CH58_RS18300 PF00889 Elongation factor TS CH58_RS18310 PF01797 Transposase IS200 like CH58_RS18315 PF00696 Amino acid kinase family CH58_RS18320 PF01765 Ribosome recycling factor CH58_RS18325 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CH58_RS18325 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CH58_RS18325 PF13288 DXP reductoisomerase C-terminal domain CH58_RS18330 PF01255 Putative undecaprenyl diphosphate synthase CH58_RS18340 PF02163 Peptidase family M50 CH58_RS18340 PF17820 PDZ domain CH58_RS18345 PF07244 Surface antigen variable number repeat CH58_RS18345 PF01103 Surface antigen CH58_RS18350 PF03938 Outer membrane protein (OmpH-like) CH58_RS18355 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CH58_RS18355 PF00132 Bacterial transferase hexapeptide (six repeats) CH58_RS18360 PF07977 FabA-like domain CH58_RS18365 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CH58_RS18365 PF00132 Bacterial transferase hexapeptide (six repeats) CH58_RS18370 PF02684 Lipid-A-disaccharide synthetase CH58_RS18375 PF01351 Ribonuclease HII CH58_RS18380 PF07733 Bacterial DNA polymerase III alpha NTPase domain CH58_RS18380 PF02811 PHP domain CH58_RS18380 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CH58_RS18380 PF14579 Helix-hairpin-helix motif CH58_RS18380 PF01336 OB-fold nucleic acid binding domain CH58_RS18385 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CH58_RS18390 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CH58_RS18395 PF09179 TilS substrate binding domain CH58_RS18395 PF11734 TilS substrate C-terminal domain CH58_RS18395 PF01171 PP-loop family CH58_RS18400 PF00034 Cytochrome c CH58_RS18405 PF07073 Modulator of Rho-dependent transcription termination (ROF) CH58_RS18410 PF06786 Uncharacterised protein family (UPF0253) CH58_RS18415 PF07152 YaeQ protein CH58_RS18420 PF00472 RF-1 domain CH58_RS18425 PF17185 NlpE C-terminal OB domain CH58_RS18425 PF04170 NlpE N-terminal domain CH58_RS18430 PF04073 Aminoacyl-tRNA editing domain CH58_RS18430 PF03129 Anticodon binding domain CH58_RS18430 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CH58_RS18435 PF18389 TrmO C-terminal domain CH58_RS18435 PF01980 tRNA-methyltransferase O CH58_RS18440 PF16358 RcsF lipoprotein CH58_RS18445 PF03180 NLPA lipoprotein CH58_RS18450 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS18455 PF09383 NIL domain CH58_RS18455 PF00005 ABC transporter CH58_RS18495 PF00248 Aldo/keto reductase family CH58_RS18505 PF03372 Endonuclease/Exonuclease/phosphatase family CH58_RS18510 PF01476 LysM domain CH58_RS18510 PF01464 Transglycosylase SLT domain CH58_RS18515 PF00753 Metallo-beta-lactamase superfamily CH58_RS18515 PF16123 Hydroxyacylglutathione hydrolase C-terminus CH58_RS18520 PF08241 Methyltransferase domain CH58_RS18525 PF00075 RNase H CH58_RS18530 PF00929 Exonuclease CH58_RS18540 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CH58_RS18555 PF01695 IstB-like ATP binding protein CH58_RS18565 PF02796 Helix-turn-helix domain of resolvase CH58_RS18565 PF00665 Integrase core domain CH58_RS18575 PF05973 Phage derived protein Gp49-like (DUF891) CH58_RS18635 PF13356 Arm DNA-binding domain CH58_RS18635 PF00589 Phage integrase family CH58_RS18640 PF01797 Transposase IS200 like CH58_RS18650 PF01668 SmpB protein CH58_RS18655 PF03364 Polyketide cyclase / dehydrase and lipid transport CH58_RS18660 PF03658 RnfH family Ubiquitin CH58_RS18665 PF04355 SmpA / OmlA family CH58_RS18670 PF02463 RecF/RecN/SMC N terminal domain CH58_RS18675 PF01513 ATP-NAD kinase CH58_RS18680 PF01025 GrpE CH58_RS18685 PF00285 Citrate synthase, C-terminal domain CH58_RS18690 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CH58_RS18695 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CH58_RS18700 PF00890 FAD binding domain CH58_RS18700 PF02910 Fumarate reductase flavoprotein C-term CH58_RS18705 PF13085 2Fe-2S iron-sulfur cluster binding domain CH58_RS18710 PF00676 Dehydrogenase E1 component CH58_RS18710 PF02779 Transketolase, pyrimidine binding domain CH58_RS18710 PF16078 2-oxoglutarate dehydrogenase N-terminus CH58_RS18710 PF16870 2-oxoglutarate dehydrogenase C-terminal CH58_RS18715 PF00364 Biotin-requiring enzyme CH58_RS18715 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CH58_RS18715 PF02817 e3 binding domain CH58_RS18720 PF00549 CoA-ligase CH58_RS18720 PF08442 ATP-grasp domain CH58_RS18725 PF00549 CoA-ligase CH58_RS18725 PF02629 CoA binding domain CH58_RS18730 PF01654 Cytochrome bd terminal oxidase subunit I CH58_RS18735 PF02322 Cytochrome bd terminal oxidase subunit II CH58_RS18740 PF08173 Membrane bound YbgT-like protein CH58_RS18745 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) CH58_RS18750 PF03061 Thioesterase superfamily CH58_RS18755 PF01618 MotA/TolQ/ExbB proton channel family CH58_RS18760 PF02472 Biopolymer transport protein ExbD/TolR CH58_RS18765 PF06519 TolA C-terminal CH58_RS18765 PF06519 TolA C-terminal CH58_RS18770 PF04052 TolB amino-terminal domain CH58_RS18770 PF07676 WD40-like Beta Propeller Repeat CH58_RS18775 PF00691 OmpA family CH58_RS18780 PF16331 TolA binding protein trimerisation CH58_RS18780 PF13174 Tetratricopeptide repeat CH58_RS18795 PF02445 Quinolinate synthetase A protein CH58_RS18800 PF04973 Nicotinamide mononucleotide transporter CH58_RS18805 PF01545 Cation efflux family CH58_RS18810 PF00793 DAHP synthetase I family CH58_RS18815 PF01695 IstB-like ATP binding protein CH58_RS18820 PF02796 Helix-turn-helix domain of resolvase CH58_RS18820 PF00665 Integrase core domain CH58_RS18825 PF07943 Penicillin-binding protein 5, C-terminal domain CH58_RS18825 PF00768 D-alanyl-D-alanine carboxypeptidase CH58_RS18840 PF00455 DeoR C terminal sensor domain CH58_RS18840 PF08220 DeoR-like helix-turn-helix domain CH58_RS18845 PF01791 DeoC/LacD family aldolase CH58_RS18850 PF01569 PAP2 superfamily CH58_RS18860 PF02080 TrkA-C domain CH58_RS18860 PF06826 Predicted Permease Membrane Region CH58_RS18865 PF00462 Glutaredoxin CH58_RS18870 PF07214 Protein of unknown function (DUF1418) CH58_RS18880 PF10722 Putative bacterial sensory transduction regulator CH58_RS18885 PF13416 Bacterial extracellular solute-binding protein CH58_RS18890 PF00005 ABC transporter CH58_RS18890 PF08402 TOBE domain CH58_RS18895 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS18900 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS18905 PF10767 Protein of unknown function (DUF2593) CH58_RS18910 PF05958 tRNA (Uracil-5-)-methyltransferase CH58_RS18915 PF00497 Bacterial extracellular solute-binding proteins, family 3 CH58_RS18945 PF00005 ABC transporter CH58_RS18950 PF03059 Nicotianamine synthase protein CH58_RS18955 PF10100 Staphylopine dehydrogenase CH58_RS18960 PF00892 EamA-like transporter family CH58_RS18970 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS18975 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS18980 PF00497 Bacterial extracellular solute-binding proteins, family 3 CH58_RS18985 PF00005 ABC transporter CH58_RS18990 PF01817 Chorismate mutase type II CH58_RS18995 PF12883 Protein of unknown function (DUF3828) CH58_RS19000 PF01370 NAD dependent epimerase/dehydratase family CH58_RS19005 PF11066 Protein of unknown function (DUF2867) CH58_RS19005 PF13460 NAD(P)H-binding CH58_RS19010 PF01212 Beta-eliminating lyase CH58_RS19015 PF00205 Thiamine pyrophosphate enzyme, central domain CH58_RS19015 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CH58_RS19015 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CH58_RS19020 PF00175 Oxidoreductase NAD-binding domain CH58_RS19020 PF00111 2Fe-2S iron-sulfur cluster binding domain CH58_RS19020 PF00970 Oxidoreductase FAD-binding domain CH58_RS19025 PF03063 Prismane/CO dehydrogenase family CH58_RS19030 PF03956 Lysine exporter LysO CH58_RS19035 PF11398 Protein of unknown function (DUF2813) CH58_RS19045 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CH58_RS19050 PF02687 FtsX-like permease family CH58_RS19050 PF12704 MacB-like periplasmic core domain CH58_RS19050 PF00005 ABC transporter CH58_RS19055 PF00313 'Cold-shock' DNA-binding domain CH58_RS19060 PF02617 ATP-dependent Clp protease adaptor protein ClpS CH58_RS19065 PF10431 C-terminal, D2-small domain, of ClpB protein CH58_RS19065 PF02861 Clp amino terminal domain, pathogenicity island component CH58_RS19065 PF17871 AAA lid domain CH58_RS19065 PF07724 AAA domain (Cdc48 subfamily) CH58_RS19065 PF00004 ATPase family associated with various cellular activities (AAA) CH58_RS19070 PF01797 Transposase IS200 like CH58_RS19075 PF01176 Translation initiation factor 1A / IF-1 CH58_RS19080 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CH58_RS19085 PF00005 ABC transporter CH58_RS19085 PF00664 ABC transporter transmembrane region CH58_RS19090 PF00005 ABC transporter CH58_RS19090 PF00664 ABC transporter transmembrane region CH58_RS19100 PF07992 Pyridine nucleotide-disulphide oxidoreductase CH58_RS19105 PF01037 Lrp/AsnC ligand binding domain CH58_RS19110 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CH58_RS19110 PF01580 FtsK/SpoIIIE family CH58_RS19110 PF09397 Ftsk gamma domain CH58_RS19110 PF17854 FtsK alpha domain CH58_RS19115 PF03548 Outer membrane lipoprotein carrier protein LolA CH58_RS19120 PF12002 MgsA AAA+ ATPase C terminal CH58_RS19120 PF16193 AAA C-terminal domain CH58_RS19120 PF00004 ATPase family associated with various cellular activities (AAA) CH58_RS19125 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CH58_RS19125 PF02403 Seryl-tRNA synthetase N-terminal domain CH58_RS19135 PF04055 Radical SAM superfamily CH58_RS19145 PF02901 Pyruvate formate lyase-like CH58_RS19145 PF01228 Glycine radical CH58_RS19150 PF01226 Formate/nitrite transporter CH58_RS19155 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding CH58_RS19155 PF18381 YcaO cyclodehydratase C-terminal domain CH58_RS19160 PF17763 Glutaminase/Asparaginase C-terminal domain CH58_RS19160 PF00710 Asparaginase, N-terminal CH58_RS19165 PF05662 Coiled stalk of trimeric autotransporter adhesin CH58_RS19165 PF05658 Head domain of trimeric autotransporter adhesin CH58_RS19165 PF05658 Head domain of trimeric autotransporter adhesin CH58_RS19165 PF03895 YadA-like membrane anchor domain CH58_RS19165 PF13018 Extended Signal Peptide of Type V secretion system CH58_RS19165 PF13018 Extended Signal Peptide of Type V secretion system CH58_RS19165 PF03895 YadA-like membrane anchor domain CH58_RS19165 PF05662 Coiled stalk of trimeric autotransporter adhesin CH58_RS19175 PF00266 Aminotransferase class-V CH58_RS19180 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CH58_RS19185 PF02224 Cytidylate kinase CH58_RS19190 PF00575 S1 RNA binding domain CH58_RS19195 PF00216 Bacterial DNA-binding protein CH58_RS19205 PF03772 Competence protein CH58_RS19205 PF00753 Metallo-beta-lactamase superfamily CH58_RS19210 PF00664 ABC transporter transmembrane region CH58_RS19210 PF00005 ABC transporter CH58_RS19215 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CH58_RS19225 PF01695 IstB-like ATP binding protein CH58_RS19230 PF02796 Helix-turn-helix domain of resolvase CH58_RS19230 PF00665 Integrase core domain CH58_RS19235 PF07063 Domain of unknown function (DUF1338) CH58_RS19245 PF00313 'Cold-shock' DNA-binding domain CH58_RS19250 PF03966 Trm112p-like protein CH58_RS19255 PF02348 Cytidylyltransferase CH58_RS19260 PF01636 Phosphotransferase enzyme family CH58_RS19270 PF13847 Methyltransferase domain CH58_RS19275 PF17192 MukF middle domain CH58_RS19275 PF03882 MukF winged-helix domain CH58_RS19275 PF17193 MukF C-terminal domain CH58_RS19280 PF04288 MukE-like family CH58_RS19285 PF04310 MukB N-terminal CH58_RS19285 PF16330 MukB hinge domain CH58_RS19295 PF01797 Transposase IS200 like CH58_RS19300 PF03734 L,D-transpeptidase catalytic domain CH58_RS19300 PF01471 Putative peptidoglycan binding domain CH58_RS19305 PF05951 Bacterial protein of unknown function (DUF882) CH58_RS19310 PF00753 Metallo-beta-lactamase superfamily CH58_RS19315 PF00155 Aminotransferase class I and II CH58_RS19320 PF00267 Gram-negative porin CH58_RS19325 PF01336 OB-fold nucleic acid binding domain CH58_RS19325 PF00152 tRNA synthetases class II (D, K and N) CH58_RS19330 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CH58_RS19330 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CH58_RS19335 PF01433 Peptidase family M1 domain CH58_RS19335 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CH58_RS19335 PF11940 Domain of unknown function (DUF3458) Ig-like fold CH58_RS19340 PF01180 Dihydroorotate dehydrogenase CH58_RS19345 PF07126 Cell-division protein ZapC CH58_RS19350 PF03473 MOSC domain CH58_RS19350 PF00111 2Fe-2S iron-sulfur cluster binding domain CH58_RS19350 PF03476 MOSC N-terminal beta barrel domain CH58_RS19355 PF01170 Putative RNA methylase family UPF0020 CH58_RS19355 PF02926 THUMP domain CH58_RS19355 PF10672 S-adenosylmethionine-dependent methyltransferase CH58_RS19360 PF16326 ABC transporter C-terminal domain CH58_RS19360 PF00005 ABC transporter CH58_RS19360 PF12848 ABC transporter CH58_RS19365 PF04403 Paraquat-inducible protein A CH58_RS19370 PF02470 MlaD protein CH58_RS19375 PF03886 ABC-type transport auxiliary lipoprotein component CH58_RS19385 PF04957 Ribosome modulation factor CH58_RS19395 PF01797 Transposase IS200 like CH58_RS19400 PF02801 Beta-ketoacyl synthase, C-terminal domain CH58_RS19400 PF00109 Beta-ketoacyl synthase, N-terminal domain CH58_RS19405 PF01695 IstB-like ATP binding protein CH58_RS19420 PF00109 Beta-ketoacyl synthase, N-terminal domain CH58_RS19420 PF02801 Beta-ketoacyl synthase, C-terminal domain CH58_RS19430 PF07977 FabA-like domain CH58_RS19435 PF13654 AAA domain CH58_RS19435 PF05362 Lon protease (S16) C-terminal proteolytic domain CH58_RS19440 PF17414 MatP C-terminal ribbon-helix-helix domain CH58_RS19440 PF06303 MatP N-terminal domain CH58_RS19445 PF01797 Transposase IS200 like CH58_RS19455 PF01389 OmpA-like transmembrane domain CH58_RS19455 PF00691 OmpA family CH58_RS19460 PF03846 Cell division inhibitor SulA CH58_RS19465 PF04993 TfoX N-terminal domain CH58_RS19465 PF04994 TfoX C-terminal domain CH58_RS19470 PF12805 FUSC-like inner membrane protein yccS CH58_RS19475 PF03733 Inner membrane component domain CH58_RS19480 PF13361 UvrD-like helicase C-terminal domain CH58_RS19480 PF00580 UvrD/REP helicase N-terminal domain CH58_RS19480 PF12462 DNA helicase IV / RNA helicase N terminal CH58_RS19485 PF02142 MGS-like domain CH58_RS19490 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) CH58_RS19495 PF13380 CoA binding domain CH58_RS19500 PF08755 Hemimethylated DNA-binding protein YccV like CH58_RS19505 PF10672 S-adenosylmethionine-dependent methyltransferase CH58_RS19505 PF17785 PUA-like domain CH58_RS19510 PF00708 Acylphosphatase CH58_RS19515 PF04358 DsrC like protein CH58_RS19525 PF13610 DDE domain CH58_RS19545 PF01565 FAD binding domain CH58_RS19545 PF08031 Berberine and berberine like CH58_RS19560 PF07977 FabA-like domain CH58_RS19565 PF02801 Beta-ketoacyl synthase, C-terminal domain CH58_RS19565 PF00109 Beta-ketoacyl synthase, N-terminal domain CH58_RS19575 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal CH58_RS19575 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal CH58_RS19585 PF00378 Enoyl-CoA hydratase/isomerase CH58_RS19600 PF00550 Phosphopantetheine attachment site CH58_RS19605 PF00698 Acyl transferase domain CH58_RS19615 PF00665 Integrase core domain CH58_RS19615 PF02796 Helix-turn-helix domain of resolvase CH58_RS19630 PF01695 IstB-like ATP binding protein CH58_RS19640 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath CH58_RS19655 PF05736 OprF membrane domain CH58_RS19655 PF00691 OmpA family CH58_RS19665 PF17871 AAA lid domain CH58_RS19665 PF10431 C-terminal, D2-small domain, of ClpB protein CH58_RS19665 PF07724 AAA domain (Cdc48 subfamily) CH58_RS19665 PF00004 ATPase family associated with various cellular activities (AAA) CH58_RS19670 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) CH58_RS19670 PF04717 Type VI secretion system, phage-baseplate injector CH58_RS19670 PF13296 Putative type VI secretion system Rhs element Vgr CH58_RS19700 PF13358 DDE superfamily endonuclease CH58_RS19700 PF13592 Winged helix-turn helix CH58_RS19760 PF00005 ABC transporter CH58_RS19760 PF12848 ABC transporter CH58_RS19770 PF00872 Transposase, Mutator family CH58_RS19775 PF00899 ThiF family CH58_RS19780 PF00994 Probable molybdopterin binding domain CH58_RS19780 PF03454 MoeA C-terminal region (domain IV) CH58_RS19780 PF03453 MoeA N-terminal region (domain I and II) CH58_RS19790 PF00005 ABC transporter CH58_RS19795 PF13533 Biotin-lipoyl like CH58_RS19815 PF00756 Putative esterase CH58_RS19820 PF08240 Alcohol dehydrogenase GroES-like domain CH58_RS19820 PF00107 Zinc-binding dehydrogenase CH58_RS19825 PF03466 LysR substrate binding domain CH58_RS19825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH58_RS19830 PF06779 Uncharacterised MFS-type transporter YbfB CH58_RS19835 PF01227 GTP cyclohydrolase I CH58_RS19840 PF04235 Protein of unknown function (DUF418) CH58_RS19845 PF13407 Periplasmic binding protein domain CH58_RS19850 PF00005 ABC transporter CH58_RS19855 PF02653 Branched-chain amino acid transport system / permease component CH58_RS19860 PF02698 DUF218 domain CH58_RS19865 PF03949 Malic enzyme, NAD binding domain CH58_RS19865 PF00390 Malic enzyme, N-terminal domain CH58_RS19870 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region CH58_RS19870 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CH58_RS19875 PF04172 LrgB-like family CH58_RS19880 PF03788 LrgA family CH58_RS19885 PF07690 Major Facilitator Superfamily CH58_RS19910 PF01797 Transposase IS200 like CH58_RS19915 PF09334 tRNA synthetases class I (M) CH58_RS19915 PF01588 Putative tRNA binding domain CH58_RS19920 PF10609 NUBPL iron-transfer P-loop NTPase CH58_RS19925 PF00485 Phosphoribulokinase / Uridine kinase family CH58_RS19930 PF00692 dUTPase CH58_RS19935 PF05170 AsmA family CH58_RS19940 PF03741 Integral membrane protein TerC family CH58_RS19940 PF03471 Transporter associated domain CH58_RS19940 PF00571 CBS domain CH58_RS19945 PF11575 FhuF 2Fe-2S C-terminal domain CH58_RS19945 PF06276 Ferric iron reductase FhuF-like transporter CH58_RS19950 PF00282 Pyridoxal-dependent decarboxylase conserved domain CH58_RS19955 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) CH58_RS19965 PF06276 Ferric iron reductase FhuF-like transporter CH58_RS19965 PF04183 IucA / IucC family CH58_RS19970 PF00005 ABC transporter CH58_RS19975 PF01032 FecCD transport family CH58_RS19980 PF01032 FecCD transport family CH58_RS19985 PF01497 Periplasmic binding protein CH58_RS19990 PF07660 Secretin and TonB N terminus short domain CH58_RS19990 PF00593 TonB dependent receptor CH58_RS19990 PF07715 TonB-dependent Receptor Plug Domain CH58_RS20000 PF00483 Nucleotidyl transferase CH58_RS20005 PF00483 Nucleotidyl transferase CH58_RS20010 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CH58_RS20010 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CH58_RS20015 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CH58_RS20015 PF01502 Phosphoribosyl-AMP cyclohydrolase CH58_RS20020 PF00977 Histidine biosynthesis protein CH58_RS20025 PF00977 Histidine biosynthesis protein CH58_RS20030 PF00117 Glutamine amidotransferase class-I CH58_RS20035 PF00475 Imidazoleglycerol-phosphate dehydratase CH58_RS20040 PF00155 Aminotransferase class I and II CH58_RS20045 PF00815 Histidinol dehydrogenase CH58_RS20050 PF01634 ATP phosphoribosyltransferase CH58_RS20050 PF08029 HisG, C-terminal domain CH58_RS20055 PF01370 NAD dependent epimerase/dehydratase family CH58_RS20065 PF02653 Branched-chain amino acid transport system / permease component CH58_RS20070 PF00005 ABC transporter CH58_RS20075 PF00005 ABC transporter CH58_RS20080 PF00465 Iron-containing alcohol dehydrogenase CH58_RS20090 PF13520 Amino acid permease CH58_RS20095 PF00929 Exonuclease CH58_RS20095 PF08411 Exonuclease C-terminal CH58_RS20105 PF04363 Protein of unknown function (DUF496) CH58_RS20110 PF00872 Transposase, Mutator family CH58_RS20115 PF09134 Invasin, domain 3 CH58_RS20115 PF02369 Bacterial Ig-like domain (group 1) CH58_RS20115 PF11924 Inverse autotransporter, beta-domain CH58_RS20120 PF07690 Major Facilitator Superfamily CH58_RS20125 PF04134 Protein of unknown function, DUF393 CH58_RS20135 PF01557 Fumarylacetoacetate (FAA) hydrolase family CH58_RS20140 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CH58_RS20140 PF13378 Enolase C-terminal domain-like CH58_RS20145 PF01070 FMN-dependent dehydrogenase CH58_RS20150 PF00764 Arginosuccinate synthase CH58_RS20155 PF01554 MatE CH58_RS20165 PF01522 Polysaccharide deacetylase CH58_RS20175 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) CH58_RS20185 PF00072 Response regulator receiver domain CH58_RS20185 PF00196 Bacterial regulatory proteins, luxR family CH58_RS20190 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CH58_RS20200 PF03480 Bacterial extracellular solute-binding protein, family 7 CH58_RS20205 PF01648 4'-phosphopantetheinyl transferase superfamily CH58_RS20205 PF17837 4'-phosphopantetheinyl transferase N-terminal domain CH58_RS20215 PF16874 Glycosyl hydrolase family 36 C-terminal domain CH58_RS20215 PF16875 Glycosyl hydrolase family 36 N-terminal domain CH58_RS20220 PF01306 LacY proton/sugar symporter CH58_RS20230 PF02371 Transposase IS116/IS110/IS902 family CH58_RS20230 PF01548 Transposase CH58_RS20235 PF00270 DEAD/DEAH box helicase CH58_RS20235 PF00271 Helicase conserved C-terminal domain CH58_RS20245 PF01797 Transposase IS200 like CH58_RS20255 PF01207 Dihydrouridine synthase (Dus) CH58_RS20265 PF00768 D-alanyl-D-alanine carboxypeptidase CH58_RS20270 PF09330 D-lactate dehydrogenase, membrane binding CH58_RS20270 PF01565 FAD binding domain CH58_RS20275 PF01928 CYTH domain CH58_RS20280 PF01844 HNH endonuclease CH58_RS20290 PF04226 Transglycosylase associated protein CH58_RS20295 PF00005 ABC transporter CH58_RS20305 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS20310 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS20315 PF07308 Protein of unknown function (DUF1456) CH58_RS20320 PF02954 Bacterial regulatory protein, Fis family CH58_RS20320 PF13188 PAS domain CH58_RS20320 PF00158 Sigma-54 interaction domain CH58_RS20325 PF02653 Branched-chain amino acid transport system / permease component CH58_RS20330 PF02653 Branched-chain amino acid transport system / permease component CH58_RS20335 PF00005 ABC transporter CH58_RS20340 PF00005 ABC transporter CH58_RS20355 PF00581 Rhodanese-like domain CH58_RS20360 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CH58_RS20365 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CH58_RS20370 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS20375 PF00005 ABC transporter CH58_RS20380 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS20385 PF13520 Amino acid permease CH58_RS20390 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CH58_RS20390 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CH58_RS20390 PF01276 Orn/Lys/Arg decarboxylase, major domain CH58_RS20400 PF00892 EamA-like transporter family CH58_RS20405 PF02796 Helix-turn-helix domain of resolvase CH58_RS20405 PF00665 Integrase core domain CH58_RS20410 PF02796 Helix-turn-helix domain of resolvase CH58_RS20410 PF00665 Integrase core domain CH58_RS20415 PF01695 IstB-like ATP binding protein CH58_RS20420 PF00267 Gram-negative porin CH58_RS20425 PF13307 Helicase C-terminal domain CH58_RS20425 PF06733 DEAD_2 CH58_RS20430 PF00199 Catalase CH58_RS20430 PF06628 Catalase-related immune-responsive CH58_RS20435 PF07437 YfaZ precursor CH58_RS20440 PF03222 Tryptophan/tyrosine permease family CH58_RS20445 PF00994 Probable molybdopterin binding domain CH58_RS20450 PF03974 Ecotin CH58_RS20455 PF00111 2Fe-2S iron-sulfur cluster binding domain CH58_RS20460 PF00268 Ribonucleotide reductase, small chain CH58_RS20465 PF03477 ATP cone domain CH58_RS20465 PF02867 Ribonucleotide reductase, barrel domain CH58_RS20465 PF00317 Ribonucleotide reductase, all-alpha domain CH58_RS20475 PF00521 DNA gyrase/topoisomerase IV, subunit A CH58_RS20475 PF03989 DNA gyrase C-terminal domain, beta-propeller CH58_RS20485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH58_RS20485 PF00512 His Kinase A (phospho-acceptor) domain CH58_RS20485 PF00072 Response regulator receiver domain CH58_RS20485 PF09456 RcsC Alpha-Beta-Loop (ABL) CH58_RS20490 PF00072 Response regulator receiver domain CH58_RS20490 PF00196 Bacterial regulatory proteins, luxR family CH58_RS20495 PF16359 RcsD-ABL domain CH58_RS20495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH58_RS20495 PF01627 Hpt domain CH58_RS20500 PF16359 RcsD-ABL domain CH58_RS20500 PF01627 Hpt domain CH58_RS20500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH58_RS20505 PF07690 Major Facilitator Superfamily CH58_RS20515 PF00267 Gram-negative porin CH58_RS20535 PF00144 Beta-lactamase CH58_RS20550 PF12706 Beta-lactamase superfamily domain CH58_RS20555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CH58_RS20555 PF00672 HAMP domain CH58_RS20555 PF02743 Cache domain CH58_RS20560 PF01278 Omptin family CH58_RS20565 PF06183 DinI-like family CH58_RS20570 PF01381 Helix-turn-helix CH58_RS20570 PF00717 Peptidase S24-like CH58_RS20575 PF06530 Phage antitermination protein Q CH58_RS20580 PF07005 Sugar-binding N-terminal domain CH58_RS20580 PF17042 Nucleotide-binding C-terminal domain CH58_RS20590 PF00455 DeoR C terminal sensor domain CH58_RS20590 PF08220 DeoR-like helix-turn-helix domain CH58_RS20595 PF01261 Xylose isomerase-like TIM barrel CH58_RS20615 PF04984 Phage tail sheath protein subtilisin-like domain CH58_RS20615 PF17482 Phage tail sheath C-terminal domain CH58_RS20655 PF04865 Baseplate J-like protein CH58_RS20670 PF07484 Phage Tail Collar Domain CH58_RS20675 PF01418 Helix-turn-helix domain, rpiR family CH58_RS20675 PF01380 SIS domain CH58_RS20680 PF00232 Glycosyl hydrolase family 1 CH58_RS20700 PF05638 Type VI secretion system effector, Hcp CH58_RS20705 PF00665 Integrase core domain CH58_RS20705 PF02796 Helix-turn-helix domain of resolvase CH58_RS20720 PF05638 Type VI secretion system effector, Hcp CH58_RS20735 PF11893 Domain of unknown function (DUF3413) CH58_RS20735 PF00884 Sulfatase CH58_RS20740 PF07208 Protein of unknown function (DUF1414) CH58_RS20745 PF04245 37-kD nucleoid-associated bacterial protein CH58_RS20755 PF01797 Transposase IS200 like CH58_RS20760 PF01386 Ribosomal L25p family CH58_RS20765 PF04851 Type III restriction enzyme, res subunit CH58_RS20765 PF00271 Helicase conserved C-terminal domain CH58_RS20770 PF01479 S4 domain CH58_RS20770 PF00849 RNA pseudouridylate synthase CH58_RS20775 PF07690 Major Facilitator Superfamily CH58_RS20780 PF13989 YejG-like protein CH58_RS20785 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CH58_RS20785 PF00005 ABC transporter CH58_RS20790 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS20790 PF12911 N-terminal TM domain of oligopeptide transport permease C CH58_RS20795 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS20800 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CH58_RS20805 PF12792 CSS motif domain associated with EAL CH58_RS20805 PF00563 EAL domain CH58_RS20810 PF00877 NlpC/P60 family CH58_RS20815 PF01569 PAP2 superfamily CH58_RS20820 PF02492 CobW/HypB/UreG, nucleotide-binding domain CH58_RS20820 PF07683 Cobalamin synthesis protein cobW C-terminal domain CH58_RS20830 PF07729 FCD domain CH58_RS20830 PF00392 Bacterial regulatory proteins, gntR family CH58_RS20835 PF08125 Mannitol dehydrogenase C-terminal domain CH58_RS20835 PF01232 Mannitol dehydrogenase Rossmann domain CH58_RS20840 PF03786 D-mannonate dehydratase (UxuA) CH58_RS20845 PF09285 Elongation factor P, C-terminal CH58_RS20845 PF08207 Elongation factor P (EF-P) KOW-like domain CH58_RS20845 PF01132 Elongation factor P (EF-P) OB domain CH58_RS20850 PF03222 Tryptophan/tyrosine permease family CH58_RS20855 PF03692 Putative zinc- or iron-chelating domain CH58_RS20865 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CH58_RS20865 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CH58_RS20865 PF01842 ACT domain CH58_RS20875 PF13276 HTH-like domain CH58_RS20875 PF13333 Integrase core domain CH58_RS20875 PF00665 Integrase core domain CH58_RS20885 PF00171 Aldehyde dehydrogenase family CH58_RS20890 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CH58_RS20890 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CH58_RS20895 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CH58_RS20905 PF00005 ABC transporter CH58_RS20910 PF02653 Branched-chain amino acid transport system / permease component CH58_RS20915 PF00293 NUDIX domain CH58_RS20920 PF00381 PTS HPr component phosphorylation site CH58_RS20920 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CH58_RS20925 PF00294 pfkB family carbohydrate kinase CH58_RS20930 PF02378 Phosphotransferase system, EIIC CH58_RS20930 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CH58_RS20935 PF00486 Transcriptional regulatory protein, C terminal CH58_RS20940 PF17550 Family of unknown function CH58_RS20950 PF02753 Pili assembly chaperone PapD, C-terminal domain CH58_RS20950 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CH58_RS20955 PF13953 PapC C-terminal domain CH58_RS20955 PF00577 Outer membrane usher protein CH58_RS20955 PF13954 PapC N-terminal domain CH58_RS20960 PF01261 Xylose isomerase-like TIM barrel CH58_RS20965 PF03601 Conserved hypothetical protein 698 CH58_RS20970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH58_RS20970 PF03466 LysR substrate binding domain CH58_RS20975 PF00324 Amino acid permease CH58_RS20985 PF01032 FecCD transport family CH58_RS20990 PF00005 ABC transporter CH58_RS20995 PF00593 TonB dependent receptor CH58_RS20995 PF07715 TonB-dependent Receptor Plug Domain CH58_RS21000 PF00043 Glutathione S-transferase, C-terminal domain CH58_RS21000 PF13417 Glutathione S-transferase, N-terminal domain CH58_RS21015 PF03180 NLPA lipoprotein CH58_RS21020 PF09383 NIL domain CH58_RS21020 PF00005 ABC transporter CH58_RS21025 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS21030 PF00768 D-alanyl-D-alanine carboxypeptidase CH58_RS21030 PF07943 Penicillin-binding protein 5, C-terminal domain CH58_RS21035 PF01695 IstB-like ATP binding protein CH58_RS21045 PF00793 DAHP synthetase I family CH58_RS21050 PF00300 Histidine phosphatase superfamily (branch 1) CH58_RS21060 PF01263 Aldose 1-epimerase CH58_RS21070 PF10509 Galactokinase galactose-binding signature CH58_RS21070 PF08544 GHMP kinases C terminal CH58_RS21070 PF00288 GHMP kinases N terminal domain CH58_RS21075 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CH58_RS21075 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CH58_RS21080 PF16363 GDP-mannose 4,6 dehydratase CH58_RS21095 PF00005 ABC transporter CH58_RS21100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH58_RS21100 PF03459 TOBE domain CH58_RS21105 PF10766 Multidrug efflux pump-associated protein AcrZ CH58_RS21115 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS21120 PF03459 TOBE domain CH58_RS21120 PF00005 ABC transporter CH58_RS21130 PF10282 Lactonase, 7-bladed beta-propeller CH58_RS21135 PF00202 Aminotransferase class-III CH58_RS21140 PF04055 Radical SAM superfamily CH58_RS21140 PF06968 Biotin and Thiamin Synthesis associated domain CH58_RS21145 PF00155 Aminotransferase class I and II CH58_RS21150 PF08241 Methyltransferase domain CH58_RS21160 PF09383 NIL domain CH58_RS21160 PF00005 ABC transporter CH58_RS21165 PF04851 Type III restriction enzyme, res subunit CH58_RS21165 PF12344 Ultra-violet resistance protein B CH58_RS21165 PF17757 UvrB interaction domain CH58_RS21165 PF02151 UvrB/uvrC motif CH58_RS21165 PF00271 Helicase conserved C-terminal domain CH58_RS21170 PF09905 DNA-binding protein VF530 CH58_RS21175 PF01933 Uncharacterised protein family UPF0052 CH58_RS21185 PF06463 Molybdenum Cofactor Synthesis C CH58_RS21185 PF04055 Radical SAM superfamily CH58_RS21190 PF01967 MoaC family CH58_RS21195 PF02597 ThiS family CH58_RS21200 PF02391 MoaE protein CH58_RS21205 PF01027 Inhibitor of apoptosis-promoting Bax1 CH58_RS21215 PF01797 Transposase IS200 like CH58_RS21220 PF00732 GMC oxidoreductase CH58_RS21220 PF05199 GMC oxidoreductase CH58_RS21225 PF00171 Aldehyde dehydrogenase family CH58_RS21230 PF13977 BetI-type transcriptional repressor, C-terminal CH58_RS21230 PF00440 Bacterial regulatory proteins, tetR family CH58_RS21235 PF02028 BCCT, betaine/carnitine/choline family transporter CH58_RS21240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH58_RS21240 PF03466 LysR substrate binding domain CH58_RS21250 PF01048 Phosphorylase superfamily CH58_RS21255 PF03825 Nucleoside H+ symporter CH58_RS21260 PF01797 Transposase IS200 like CH58_RS21265 PF03825 Nucleoside H+ symporter CH58_RS21270 PF13801 Heavy-metal resistance CH58_RS21275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH58_RS21275 PF00512 His Kinase A (phospho-acceptor) domain CH58_RS21280 PF00158 Sigma-54 interaction domain CH58_RS21280 PF00072 Response regulator receiver domain CH58_RS21280 PF02954 Bacterial regulatory protein, Fis family CH58_RS21285 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CH58_RS21290 PF03466 LysR substrate binding domain CH58_RS21290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH58_RS21315 PF00005 ABC transporter CH58_RS21320 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CH58_RS21325 PF09209 Tetracyclin repressor-like, C-terminal domain CH58_RS21325 PF00440 Bacterial regulatory proteins, tetR family CH58_RS21330 PF00271 Helicase conserved C-terminal domain CH58_RS21330 PF00270 DEAD/DEAH box helicase CH58_RS21335 PF13358 DDE superfamily endonuclease CH58_RS21335 PF13592 Winged helix-turn helix CH58_RS21360 PF00872 Transposase, Mutator family CH58_RS21365 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CH58_RS21365 PF00356 Bacterial regulatory proteins, lacI family CH58_RS21370 PF00665 Integrase core domain CH58_RS21370 PF02796 Helix-turn-helix domain of resolvase CH58_RS21380 PF01695 IstB-like ATP binding protein CH58_RS21385 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CH58_RS21385 PF00356 Bacterial regulatory proteins, lacI family CH58_RS21395 PF06167 Glucose-regulated metallo-peptidase M90 CH58_RS21415 PF00005 ABC transporter CH58_RS21415 PF00664 ABC transporter transmembrane region CH58_RS21425 PF12833 Helix-turn-helix domain CH58_RS21435 PF10964 Protein of unknown function (DUF2766) CH58_RS21440 PF13996 YobH-like protein CH58_RS21445 PF13974 YebO-like protein CH58_RS21460 PF00324 Amino acid permease CH58_RS21465 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP CH58_RS21475 PF10736 Protein of unknown function (DUF2627) CH58_RS21480 PF00313 'Cold-shock' DNA-binding domain CH58_RS21485 PF02578 Multi-copper polyphenol oxidoreductase laccase CH58_RS21490 PF13847 Methyltransferase domain CH58_RS21500 PF13426 PAS domain CH58_RS21500 PF08448 PAS fold CH58_RS21500 PF08447 PAS fold CH58_RS21500 PF05231 MASE1 CH58_RS21500 PF00990 Diguanylate cyclase, GGDEF domain CH58_RS21500 PF00563 EAL domain CH58_RS21505 PF00593 TonB dependent receptor CH58_RS21505 PF07715 TonB-dependent Receptor Plug Domain CH58_RS21510 PF02659 Putative manganese efflux pump CH58_RS21515 PF06173 Protein of unknown function (DUF986) CH58_RS21520 PF03613 PTS system mannose/fructose/sorbose family IID component CH58_RS21525 PF03609 PTS system sorbose-specific iic component CH58_RS21530 PF03830 PTS system sorbose subfamily IIB component CH58_RS21530 PF03610 PTS system fructose IIA component CH58_RS21535 PF03471 Transporter associated domain CH58_RS21535 PF03741 Integral membrane protein TerC family CH58_RS21540 PF01047 MarR family CH58_RS21545 PF01557 Fumarylacetoacetate (FAA) hydrolase family CH58_RS21550 PF01557 Fumarylacetoacetate (FAA) hydrolase family CH58_RS21555 PF00171 Aldehyde dehydrogenase family CH58_RS21560 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CH58_RS21565 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase CH58_RS21570 PF01557 Fumarylacetoacetate (FAA) hydrolase family CH58_RS21575 PF03328 HpcH/HpaI aldolase/citrate lyase family CH58_RS21580 PF07690 Major Facilitator Superfamily CH58_RS21585 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal CH58_RS21585 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal CH58_RS21595 PF03315 Serine dehydratase beta chain CH58_RS21595 PF03313 Serine dehydratase alpha chain CH58_RS21600 PF00293 NUDIX domain CH58_RS21605 PF04715 Anthranilate synthase component I, N terminal region CH58_RS21605 PF00425 chorismate binding enzyme CH58_RS21610 PF03701 Uncharacterised protein family (UPF0181) CH58_RS21615 PF02222 ATP-grasp domain CH58_RS21620 PF03880 DbpA RNA binding domain CH58_RS21620 PF00270 DEAD/DEAH box helicase CH58_RS21620 PF00271 Helicase conserved C-terminal domain CH58_RS21625 PF07130 YebG protein CH58_RS21630 PF04266 ASCH domain CH58_RS21635 PF13995 YebF-like protein CH58_RS21640 PF00326 Prolyl oligopeptidase family CH58_RS21640 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CH58_RS21645 PF02796 Helix-turn-helix domain of resolvase CH58_RS21645 PF00665 Integrase core domain CH58_RS21655 PF01695 IstB-like ATP binding protein CH58_RS21660 PF00561 alpha/beta hydrolase fold CH58_RS21665 PF06440 DNA polymerase III, theta subunit CH58_RS21670 PF00210 Ferritin-like domain CH58_RS21675 PF04234 CopC domain CH58_RS21685 PF10709 Protein of unknown function (DUF2511) CH58_RS21705 PF01312 FlhB HrpN YscU SpaS Family CH58_RS21710 PF00771 FHIPEP family CH58_RS21715 PF06366 Flagellar protein FlhE CH58_RS21720 PF09134 Invasin, domain 3 CH58_RS21720 PF07979 Intimin C-type lectin domain CH58_RS21720 PF02369 Bacterial Ig-like domain (group 1) CH58_RS21720 PF11924 Inverse autotransporter, beta-domain CH58_RS21725 PF01797 Transposase IS200 like CH58_RS21730 PF02369 Bacterial Ig-like domain (group 1) CH58_RS21730 PF11924 Inverse autotransporter, beta-domain CH58_RS21730 PF07979 Intimin C-type lectin domain CH58_RS21730 PF09134 Invasin, domain 3 CH58_RS21735 PF05130 FlgN protein CH58_RS21740 PF04316 Anti-sigma-28 factor, FlgM CH58_RS21745 PF13144 Chaperone for flagella basal body P-ring formation CH58_RS21745 PF17656 FlgA N-terminal domain CH58_RS21750 PF00460 Flagella basal body rod protein CH58_RS21755 PF00460 Flagella basal body rod protein CH58_RS21755 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CH58_RS21760 PF13861 FlgD Tudor-like domain CH58_RS21760 PF13860 FlgD Ig-like domain CH58_RS21760 PF03963 Flagellar hook capping protein - N-terminal region CH58_RS21765 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CH58_RS21765 PF07559 Flagellar basal body protein FlaE CH58_RS21765 PF00460 Flagella basal body rod protein CH58_RS21770 PF00460 Flagella basal body rod protein CH58_RS21770 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CH58_RS21780 PF02107 Flagellar L-ring protein CH58_RS21785 PF02119 Flagellar P-ring protein CH58_RS21790 PF10135 Rod binding protein CH58_RS21790 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CH58_RS21795 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CH58_RS21795 PF00460 Flagella basal body rod protein CH58_RS21800 PF00669 Bacterial flagellin N-terminal helical region CH58_RS21805 PF04198 Putative sugar-binding domain CH58_RS21810 PF00596 Class II Aldolase and Adducin N-terminal domain CH58_RS21815 PF02653 Branched-chain amino acid transport system / permease component CH58_RS21820 PF13407 Periplasmic binding protein domain CH58_RS21825 PF00005 ABC transporter CH58_RS21835 PF00294 pfkB family carbohydrate kinase CH58_RS21850 PF01311 Bacterial export proteins, family 1 CH58_RS21855 PF01313 Bacterial export proteins, family 3 CH58_RS21860 PF00813 FliP family CH58_RS21865 PF04347 Flagellar biosynthesis protein, FliO CH58_RS21870 PF16973 Flagellar motor switch protein FliN N-terminal CH58_RS21870 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CH58_RS21875 PF02154 Flagellar motor switch protein FliM CH58_RS21875 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CH58_RS21880 PF03748 Flagellar basal body-associated protein FliL CH58_RS21885 PF02120 Flagellar hook-length control protein FliK CH58_RS21890 PF02050 Flagellar FliJ protein CH58_RS21895 PF18269 T3SS EscN ATPase C-terminal domain CH58_RS21895 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CH58_RS21900 PF02108 Flagellar assembly protein FliH CH58_RS21905 PF14842 FliG N-terminal domain CH58_RS21905 PF14841 FliG middle domain CH58_RS21905 PF01706 FliG C-terminal domain CH58_RS21910 PF01514 Secretory protein of YscJ/FliF family CH58_RS21910 PF08345 Flagellar M-ring protein C-terminal CH58_RS21915 PF02049 Flagellar hook-basal body complex protein FliE CH58_RS21930 PF00730 HhH-GPD superfamily base excision DNA repair protein CH58_RS21935 PF01966 HD domain CH58_RS21940 PF02743 Cache domain CH58_RS21940 PF00211 Adenylate and Guanylate cyclase catalytic domain CH58_RS21940 PF00672 HAMP domain CH58_RS21945 PF12833 Helix-turn-helix domain CH58_RS21955 PF05400 Flagellar protein FliT CH58_RS21960 PF02561 Flagellar protein FliS CH58_RS21965 PF07196 Flagellin hook IN motif CH58_RS21965 PF02465 Flagellar hook-associated protein 2 N-terminus CH58_RS21965 PF07195 Flagellar hook-associated protein 2 C-terminus CH58_RS21970 PF00669 Bacterial flagellin N-terminal helical region CH58_RS21970 PF08884 Flagellin D3 domain CH58_RS21970 PF00700 Bacterial flagellin C-terminal helical region CH58_RS21975 PF04545 Sigma-70, region 4 CH58_RS21975 PF04539 Sigma-70 region 3 CH58_RS21975 PF04542 Sigma-70 region 2 CH58_RS21980 PF02899 Phage integrase, N-terminal SAM-like domain CH58_RS21985 PF00291 Pyridoxal-phosphate dependent enzyme CH58_RS21990 PF00497 Bacterial extracellular solute-binding proteins, family 3 CH58_RS21995 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS22000 PF00005 ABC transporter CH58_RS22015 PF01695 IstB-like ATP binding protein CH58_RS22025 PF00665 Integrase core domain CH58_RS22025 PF02796 Helix-turn-helix domain of resolvase CH58_RS22030 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CH58_RS22030 PF14850 DNA-binding domain of Proline dehydrogenase CH58_RS22030 PF01619 Proline dehydrogenase CH58_RS22030 PF00171 Aldehyde dehydrogenase family CH58_RS22040 PF00474 Sodium:solute symporter family CH58_RS22045 PF03239 Iron permease FTR1 family CH58_RS22050 PF13473 Cupredoxin-like domain CH58_RS22050 PF09375 Imelysin CH58_RS22055 PF04261 Dyp-type peroxidase family CH58_RS22060 PF03358 NADPH-dependent FMN reductase CH58_RS22065 PF01344 Kelch motif CH58_RS22070 PF00324 Amino acid permease CH58_RS22080 PF13505 Outer membrane protein beta-barrel domain CH58_RS22090 PF06942 GlpM protein CH58_RS22095 PF10769 Protein of unknown function (DUF2594) CH58_RS22100 PF00196 Bacterial regulatory proteins, luxR family CH58_RS22100 PF00072 Response regulator receiver domain CH58_RS22105 PF08459 UvrC Helix-hairpin-helix N-terminal CH58_RS22105 PF01541 GIY-YIG catalytic domain CH58_RS22105 PF02151 UvrB/uvrC motif CH58_RS22110 PF01066 CDP-alcohol phosphatidyltransferase CH58_RS22155 PF05638 Type VI secretion system effector, Hcp CH58_RS22240 PF00392 Bacterial regulatory proteins, gntR family CH58_RS22240 PF07702 UTRA domain CH58_RS22245 PF00480 ROK family CH58_RS22250 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CH58_RS22250 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CH58_RS22260 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS22265 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS22270 PF08402 TOBE domain CH58_RS22270 PF00005 ABC transporter CH58_RS22305 PF01695 IstB-like ATP binding protein CH58_RS22340 PF00593 TonB dependent receptor CH58_RS22340 PF07715 TonB-dependent Receptor Plug Domain CH58_RS22345 PF00501 AMP-binding enzyme CH58_RS22345 PF13193 AMP-binding enzyme C-terminal domain CH58_RS22350 PF00975 Thioesterase domain CH58_RS22360 PF02801 Beta-ketoacyl synthase, C-terminal domain CH58_RS22360 PF00109 Beta-ketoacyl synthase, N-terminal domain CH58_RS22360 PF16197 Ketoacyl-synthetase C-terminal extension CH58_RS22360 PF00698 Acyl transferase domain CH58_RS22360 PF00550 Phosphopantetheine attachment site CH58_RS22360 PF00668 Condensation domain CH58_RS22365 PF08242 Methyltransferase domain CH58_RS22365 PF00668 Condensation domain CH58_RS22365 PF00501 AMP-binding enzyme CH58_RS22365 PF00550 Phosphopantetheine attachment site CH58_RS22375 PF00664 ABC transporter transmembrane region CH58_RS22375 PF04954 Siderophore-interacting protein CH58_RS22375 PF00005 ABC transporter CH58_RS22375 PF08021 Siderophore-interacting FAD-binding domain CH58_RS22380 PF00664 ABC transporter transmembrane region CH58_RS22380 PF00005 ABC transporter CH58_RS22385 PF07690 Major Facilitator Superfamily CH58_RS22390 PF00425 chorismate binding enzyme CH58_RS22395 PF00589 Phage integrase family CH58_RS22395 PF13356 Arm DNA-binding domain CH58_RS22405 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CH58_RS22405 PF02753 Pili assembly chaperone PapD, C-terminal domain CH58_RS22415 PF13953 PapC C-terminal domain CH58_RS22415 PF00577 Outer membrane usher protein CH58_RS22415 PF13954 PapC N-terminal domain CH58_RS22420 PF02753 Pili assembly chaperone PapD, C-terminal domain CH58_RS22420 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CH58_RS22430 PF01627 Hpt domain CH58_RS22430 PF00512 His Kinase A (phospho-acceptor) domain CH58_RS22430 PF00989 PAS fold CH58_RS22430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH58_RS22430 PF00072 Response regulator receiver domain CH58_RS22430 PF00497 Bacterial extracellular solute-binding proteins, family 3 CH58_RS22435 PF00072 Response regulator receiver domain CH58_RS22435 PF00196 Bacterial regulatory proteins, luxR family CH58_RS22440 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CH58_RS22440 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CH58_RS22445 PF01575 MaoC like domain CH58_RS22450 PF03328 HpcH/HpaI aldolase/citrate lyase family CH58_RS22455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CH58_RS22455 PF03466 LysR substrate binding domain CH58_RS22470 PF07690 Major Facilitator Superfamily CH58_RS22475 PF01695 IstB-like ATP binding protein CH58_RS22480 PF02796 Helix-turn-helix domain of resolvase CH58_RS22480 PF00665 Integrase core domain CH58_RS22490 PF04909 Amidohydrolase CH58_RS22500 PF02508 Rnf-Nqr subunit, membrane protein CH58_RS22505 PF00155 Aminotransferase class I and II CH58_RS22510 PF00324 Amino acid permease CH58_RS22515 PF08220 DeoR-like helix-turn-helix domain CH58_RS22515 PF00455 DeoR C terminal sensor domain CH58_RS22525 PF04960 Glutaminase CH58_RS22535 PF03239 Iron permease FTR1 family CH58_RS22540 PF10634 Fe2+ transport protein CH58_RS22550 PF12704 MacB-like periplasmic core domain CH58_RS22550 PF02687 FtsX-like permease family CH58_RS22550 PF00005 ABC transporter CH58_RS22560 PF00005 ABC transporter CH58_RS22560 PF02687 FtsX-like permease family CH58_RS22560 PF12704 MacB-like periplasmic core domain CH58_RS22565 PF00578 AhpC/TSA family CH58_RS22575 PF09313 Domain of unknown function (DUF1971) CH58_RS22575 PF03848 Tellurite resistance protein TehB CH58_RS22580 PF00557 Metallopeptidase family M24 CH58_RS22590 PF01522 Polysaccharide deacetylase CH58_RS22590 PF14883 Hypothetical glycosyl hydrolase family 13 CH58_RS22595 PF00535 Glycosyl transferase family 2 CH58_RS22600 PF13994 PgaD-like protein CH58_RS22615 PF02562 PhoH-like protein CH58_RS22620 PF01699 Sodium/calcium exchanger protein CH58_RS22625 PF07730 Histidine kinase CH58_RS22625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH58_RS22625 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CH58_RS22625 PF00672 HAMP domain CH58_RS22630 PF00392 Bacterial regulatory proteins, gntR family CH58_RS22630 PF00155 Aminotransferase class I and II CH58_RS22640 PF00202 Aminotransferase class-III CH58_RS22645 PF04958 Arginine N-succinyltransferase beta subunit CH58_RS22650 PF00171 Aldehyde dehydrogenase family CH58_RS22655 PF04996 Succinylarginine dihydrolase CH58_RS22660 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CH58_RS22665 PF00267 Gram-negative porin CH58_RS22670 PF00665 Integrase core domain CH58_RS22670 PF02796 Helix-turn-helix domain of resolvase CH58_RS22675 PF01695 IstB-like ATP binding protein CH58_RS22685 PF01979 Amidohydrolase family CH58_RS22690 PF07702 UTRA domain CH58_RS22690 PF00392 Bacterial regulatory proteins, gntR family CH58_RS22695 PF01979 Amidohydrolase family CH58_RS22700 PF05962 HutD CH58_RS22710 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CH58_RS22710 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CH58_RS22715 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CH58_RS22715 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CH58_RS22720 PF01370 NAD dependent epimerase/dehydratase family CH58_RS22765 PF00872 Transposase, Mutator family CH58_RS22790 PF08242 Methyltransferase domain CH58_RS22830 PF00672 HAMP domain CH58_RS22830 PF00512 His Kinase A (phospho-acceptor) domain CH58_RS22830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CH58_RS22835 PF00072 Response regulator receiver domain CH58_RS22835 PF00486 Transcriptional regulatory protein, C terminal CH58_RS22840 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CH58_RS22885 PF06071 Protein of unknown function (DUF933) CH58_RS22885 PF01926 50S ribosome-binding GTPase CH58_RS22890 PF01195 Peptidyl-tRNA hydrolase CH58_RS22895 PF10762 Protein of unknown function (DUF2583) CH58_RS22905 PF14572 Phosphoribosyl synthetase-associated domain CH58_RS22905 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CH58_RS22915 PF00288 GHMP kinases N terminal domain CH58_RS22915 PF08544 GHMP kinases C terminal CH58_RS22920 PF03550 Outer membrane lipoprotein LolB CH58_RS22925 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CH58_RS22925 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CH58_RS22925 PF01488 Shikimate / quinate 5-dehydrogenase CH58_RS22930 PF03462 PCRF domain CH58_RS22930 PF00472 RF-1 domain CH58_RS22935 PF17827 PrmC N-terminal domain CH58_RS22935 PF13847 Methyltransferase domain CH58_RS22940 PF04247 Invasion gene expression up-regulator, SirB CH58_RS22945 PF13369 Transglutaminase-like superfamily CH58_RS22950 PF00793 DAHP synthetase I family CH58_RS22955 PF00916 Sulfate permease family CH58_RS22955 PF01740 STAS domain CH58_RS22960 PF01695 IstB-like ATP binding protein CH58_RS22965 PF02796 Helix-turn-helix domain of resolvase CH58_RS22965 PF00665 Integrase core domain CH58_RS22970 PF01740 STAS domain CH58_RS22970 PF00916 Sulfate permease family CH58_RS22985 PF03009 Glycerophosphoryl diester phosphodiesterase family CH58_RS22995 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS23000 PF00528 Binding-protein-dependent transport system inner membrane component CH58_RS23005 PF00005 ABC transporter CH58_RS23005 PF08402 TOBE domain CH58_RS23015 PF00005 ABC transporter CH58_RS23015 PF08402 TOBE domain CH58_RS23020 PF03009 Glycerophosphoryl diester phosphodiesterase family CH58_RS23025 PF00480 ROK family CH58_RS23025 PF01325 Iron dependent repressor, N-terminal DNA binding domain CH58_RS23035 PF02811 PHP domain CH58_RS23040 PF02613 Nitrate reductase delta subunit CH58_RS23045 PF07273 Protein of unknown function (DUF1439) CH58_RS23050 PF07690 Major Facilitator Superfamily CH58_RS23055 PF13302 Acetyltransferase (GNAT) domain CH58_RS23060 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CH58_RS23065 PF03023 Lipid II flippase MurJ CH58_RS23070 PF17287 POTRA domain CH58_RS23070 PF08479 POTRA domain, ShlB-type CH58_RS23070 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CH58_RS23075 PF13332 Hemagglutinin repeat CH58_RS23075 PF05860 haemagglutination activity domain CH58_RS23080 PF05746 DALR anticodon binding domain CH58_RS23080 PF00750 tRNA synthetases class I (R) CH58_RS23080 PF03485 Arginyl tRNA synthetase N terminal domain CH58_RS23085 PF06185 YecM protein CH58_RS23090 PF03932 CutC family CH58_RS23095 PF08003 Protein of unknown function (DUF1698)