locus-tag class description ISU54_RS00005 PF11638 DnaA N-terminal domain ISU54_RS00005 PF00308 Bacterial dnaA protein ISU54_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix ISU54_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain ISU54_RS00010 PF02767 DNA polymerase III beta subunit, central domain ISU54_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain ISU54_RS00020 PF02463 RecF/RecN/SMC N terminal domain ISU54_RS00025 PF18053 DNA gyrase B subunit insert domain ISU54_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus ISU54_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU54_RS00025 PF01751 Toprim domain ISU54_RS00025 PF00204 DNA gyrase B ISU54_RS00040 PF02423 Ornithine cyclodeaminase/mu-crystallin family ISU54_RS00045 PF13291 ACT domain ISU54_RS00045 PF00291 Pyridoxal-phosphate dependent enzyme ISU54_RS00055 PF07119 Protein of unknown function (DUF1375) ISU54_RS00060 PF00011 Hsp20/alpha crystallin family ISU54_RS00065 PF00011 Hsp20/alpha crystallin family ISU54_RS00070 PF02080 TrkA-C domain ISU54_RS00070 PF06826 Predicted Permease Membrane Region ISU54_RS00075 PF00155 Aminotransferase class I and II ISU54_RS00085 PF00128 Alpha amylase, catalytic domain ISU54_RS00090 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU54_RS00090 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU54_RS00100 PF13488 Glycine zipper ISU54_RS00100 PF00691 OmpA family ISU54_RS00110 PF03352 Methyladenine glycosylase ISU54_RS00115 PF02091 Glycyl-tRNA synthetase alpha subunit ISU54_RS00120 PF05746 DALR anticodon binding domain ISU54_RS00120 PF02092 Glycyl-tRNA synthetase beta subunit ISU54_RS00130 PF11254 Protein of unknown function (DUF3053) ISU54_RS00135 PF02378 Phosphotransferase system, EIIC ISU54_RS00135 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ISU54_RS00135 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ISU54_RS00140 PF08125 Mannitol dehydrogenase C-terminal domain ISU54_RS00140 PF01232 Mannitol dehydrogenase Rossmann domain ISU54_RS00145 PF05068 Mannitol repressor ISU54_RS00150 PF10928 Protein of unknown function (DUF2810) ISU54_RS00165 PF02203 Tar ligand binding domain homologue ISU54_RS00165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU54_RS00165 PF00672 HAMP domain ISU54_RS00170 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ISU54_RS00170 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ISU54_RS00175 PF02634 FdhD/NarQ family ISU54_RS00185 PF09163 Formate dehydrogenase N, transmembrane ISU54_RS00185 PF13247 4Fe-4S dicluster domain ISU54_RS00190 PF01292 Prokaryotic cytochrome b561 ISU54_RS00195 PF04216 Protein involved in formate dehydrogenase formation ISU54_RS00200 PF12390 Selenocysteine synthase N terminal ISU54_RS00200 PF03841 L-seryl-tRNA selenium transferase ISU54_RS00205 PF00009 Elongation factor Tu GTP binding domain ISU54_RS00205 PF03144 Elongation factor Tu domain 2 ISU54_RS00205 PF09106 Elongation factor SelB, winged helix ISU54_RS00205 PF09107 Elongation factor SelB, winged helix ISU54_RS00235 PF07690 Major Facilitator Superfamily ISU54_RS00250 PF01757 Acyltransferase family ISU54_RS00255 PF00419 Fimbrial protein ISU54_RS00275 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU54_RS00275 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU54_RS00285 PF13407 Periplasmic binding protein domain ISU54_RS00290 PF00005 ABC transporter ISU54_RS00295 PF02653 Branched-chain amino acid transport system / permease component ISU54_RS00300 PF12833 Helix-turn-helix domain ISU54_RS00310 PF13356 Arm DNA-binding domain ISU54_RS00310 PF00589 Phage integrase family ISU54_RS00310 PF14659 Phage integrase, N-terminal SAM-like domain ISU54_RS00320 PF04606 Ogr/Delta-like zinc finger ISU54_RS00355 PF00005 ABC transporter ISU54_RS00360 PF01032 FecCD transport family ISU54_RS00365 PF01032 FecCD transport family ISU54_RS00370 PF01497 Periplasmic binding protein ISU54_RS00385 PF00156 Phosphoribosyl transferase domain ISU54_RS00390 PF00291 Pyridoxal-phosphate dependent enzyme ISU54_RS00395 PF17392 Urocanase C-terminal domain ISU54_RS00395 PF01175 Urocanase Rossmann-like domain ISU54_RS00395 PF17391 Urocanase N-terminal domain ISU54_RS00400 PF00221 Aromatic amino acid lyase ISU54_RS00405 PF00324 Amino acid permease ISU54_RS00410 PF12146 Serine aminopeptidase, S33 ISU54_RS00415 PF00884 Sulfatase ISU54_RS00415 PF08019 Phosphoethanolamine transferase EptA/EptB ISU54_RS00420 PF00072 Response regulator receiver domain ISU54_RS00420 PF00196 Bacterial regulatory proteins, luxR family ISU54_RS00430 PF00665 Integrase core domain ISU54_RS00430 PF02796 Helix-turn-helix domain of resolvase ISU54_RS00435 PF01695 IstB-like ATP binding protein ISU54_RS00440 PF00132 Bacterial transferase hexapeptide (six repeats) ISU54_RS00445 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ISU54_RS00445 PF08501 Shikimate dehydrogenase substrate binding domain ISU54_RS00445 PF01488 Shikimate / quinate 5-dehydrogenase ISU54_RS00450 PF01300 Telomere recombination ISU54_RS00455 PF01396 Topoisomerase DNA binding C4 zinc finger ISU54_RS00460 PF04361 Protein of unknown function (DUF494) ISU54_RS00465 PF02481 DNA recombination-mediator protein A ISU54_RS00465 PF17782 DprA winged helix domain ISU54_RS00470 PF01327 Polypeptide deformylase ISU54_RS00475 PF00551 Formyl transferase ISU54_RS00475 PF02911 Formyl transferase, C-terminal domain ISU54_RS00480 PF01189 16S rRNA methyltransferase RsmB/F ISU54_RS00480 PF01029 NusB family ISU54_RS00485 PF02080 TrkA-C domain ISU54_RS00485 PF02254 TrkA-N domain ISU54_RS00490 PF01741 Large-conductance mechanosensitive channel, MscL ISU54_RS00495 PF03889 Alternative ribosome-rescue factor A ISU54_RS00500 PF13411 MerR HTH family regulatory protein ISU54_RS00505 PF01196 Ribosomal protein L17 ISU54_RS00510 PF01000 RNA polymerase Rpb3/RpoA insert domain ISU54_RS00510 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ISU54_RS00510 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ISU54_RS00515 PF01479 S4 domain ISU54_RS00515 PF00163 Ribosomal protein S4/S9 N-terminal domain ISU54_RS00520 PF00411 Ribosomal protein S11 ISU54_RS00525 PF00416 Ribosomal protein S13/S18 ISU54_RS00530 PF00444 Ribosomal protein L36 ISU54_RS00535 PF00344 SecY translocase ISU54_RS00540 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ISU54_RS00545 PF00327 Ribosomal protein L30p/L7e ISU54_RS00550 PF03719 Ribosomal protein S5, C-terminal domain ISU54_RS00550 PF00333 Ribosomal protein S5, N-terminal domain ISU54_RS00555 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ISU54_RS00560 PF00347 Ribosomal protein L6 ISU54_RS00565 PF00410 Ribosomal protein S8 ISU54_RS00570 PF00253 Ribosomal protein S14p/S29e ISU54_RS00575 PF00673 ribosomal L5P family C-terminus ISU54_RS00575 PF00281 Ribosomal protein L5 ISU54_RS00580 PF00467 KOW motif ISU54_RS00580 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ISU54_RS00585 PF00238 Ribosomal protein L14p/L23e ISU54_RS00590 PF00366 Ribosomal protein S17 ISU54_RS00595 PF00831 Ribosomal L29 protein ISU54_RS00600 PF00252 Ribosomal protein L16p/L10e ISU54_RS00605 PF00189 Ribosomal protein S3, C-terminal domain ISU54_RS00605 PF07650 KH domain ISU54_RS00610 PF00237 Ribosomal protein L22p/L17e ISU54_RS00615 PF00203 Ribosomal protein S19 ISU54_RS00620 PF03947 Ribosomal Proteins L2, C-terminal domain ISU54_RS00620 PF00181 Ribosomal Proteins L2, RNA binding domain ISU54_RS00625 PF00276 Ribosomal protein L23 ISU54_RS00630 PF00573 Ribosomal protein L4/L1 family ISU54_RS00635 PF00297 Ribosomal protein L3 ISU54_RS00640 PF00338 Ribosomal protein S10p/S20e ISU54_RS00645 PF00210 Ferritin-like domain ISU54_RS00650 PF04324 BFD-like [2Fe-2S] binding domain ISU54_RS00655 PF01797 Transposase IS200 like ISU54_RS00660 PF03143 Elongation factor Tu C-terminal domain ISU54_RS00660 PF03144 Elongation factor Tu domain 2 ISU54_RS00660 PF00009 Elongation factor Tu GTP binding domain ISU54_RS00665 PF00009 Elongation factor Tu GTP binding domain ISU54_RS00665 PF03144 Elongation factor Tu domain 2 ISU54_RS00665 PF03764 Elongation factor G, domain IV ISU54_RS00665 PF14492 Elongation Factor G, domain II ISU54_RS00665 PF00679 Elongation factor G C-terminus ISU54_RS00670 PF00177 Ribosomal protein S7p/S5e ISU54_RS00675 PF00164 Ribosomal protein S12/S23 ISU54_RS00680 PF04077 DsrH like protein ISU54_RS00685 PF02635 DsrE/DsrF-like family ISU54_RS00690 PF02635 DsrE/DsrF-like family ISU54_RS00695 PF13309 HTH domain ISU54_RS00695 PF08348 YheO-like PAS domain ISU54_RS00700 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ISU54_RS00700 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISU54_RS00705 PF04102 SlyX ISU54_RS00710 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISU54_RS00715 PF09526 Probable metal-binding protein (DUF2387) ISU54_RS00720 PF00999 Sodium/hydrogen exchanger family ISU54_RS00720 PF02254 TrkA-N domain ISU54_RS00725 PF02525 Flavodoxin-like fold ISU54_RS00735 PF00535 Glycosyl transferase family 2 ISU54_RS00745 PF02668 Taurine catabolism dioxygenase TauD, TfdA family ISU54_RS00750 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS00755 PF00005 ABC transporter ISU54_RS00760 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ISU54_RS00765 PF01810 LysE type translocator ISU54_RS00770 PF00561 alpha/beta hydrolase fold ISU54_RS00775 PF06794 Uncharacterised protein family (UPF0270) ISU54_RS00780 PF00485 Phosphoribulokinase / Uridine kinase family ISU54_RS00790 PF02566 OsmC-like protein ISU54_RS00795 PF00027 Cyclic nucleotide-binding domain ISU54_RS00795 PF13545 Crp-like helix-turn-helix domain ISU54_RS00800 PF12805 FUSC-like inner membrane protein yccS ISU54_RS00805 PF00202 Aminotransferase class-III ISU54_RS00810 PF00117 Glutamine amidotransferase class-I ISU54_RS00815 PF05872 Bacterial protein of unknown function (DUF853) ISU54_RS00820 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ISU54_RS00825 PF11975 Family 4 glycosyl hydrolase C-terminal domain ISU54_RS00825 PF02056 Family 4 glycosyl hydrolase ISU54_RS00830 PF00356 Bacterial regulatory proteins, lacI family ISU54_RS00840 PF07690 Major Facilitator Superfamily ISU54_RS00845 PF07969 Amidohydrolase family ISU54_RS00850 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU54_RS00850 PF18267 Rubredoxin NAD+ reductase C-terminal domain ISU54_RS00850 PF04324 BFD-like [2Fe-2S] binding domain ISU54_RS00850 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ISU54_RS00850 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ISU54_RS00855 PF13806 Rieske-like [2Fe-2S] domain ISU54_RS00860 PF01226 Formate/nitrite transporter ISU54_RS00865 PF14824 Sirohaem biosynthesis protein central ISU54_RS00865 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ISU54_RS00865 PF10414 Sirohaem synthase dimerisation region ISU54_RS00870 PF00579 tRNA synthetases class I (W and Y) ISU54_RS00875 PF13419 Haloacid dehalogenase-like hydrolase ISU54_RS00880 PF00834 Ribulose-phosphate 3 epimerase family ISU54_RS00885 PF02086 D12 class N6 adenine-specific DNA methyltransferase ISU54_RS00890 PF05036 Sporulation related domain ISU54_RS00895 PF01761 3-dehydroquinate synthase ISU54_RS00900 PF01202 Shikimate kinase ISU54_RS00905 PF03958 Bacterial type II/III secretion system short domain ISU54_RS00905 PF00263 Bacterial type II and III secretion system protein ISU54_RS00930 PF00912 Transglycosylase ISU54_RS00930 PF17092 Penicillin-binding protein OB-like domain ISU54_RS00930 PF00905 Penicillin binding protein transpeptidase domain ISU54_RS00935 PF00293 NUDIX domain ISU54_RS00940 PF07095 Intracellular growth attenuator protein IgaA ISU54_RS00945 PF13419 Haloacid dehalogenase-like hydrolase ISU54_RS00950 PF01479 S4 domain ISU54_RS00955 PF01430 Hsp33 protein ISU54_RS00960 PF01293 Phosphoenolpyruvate carboxykinase ISU54_RS00965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU54_RS00965 PF00672 HAMP domain ISU54_RS00965 PF00512 His Kinase A (phospho-acceptor) domain ISU54_RS00970 PF00072 Response regulator receiver domain ISU54_RS00970 PF00486 Transcriptional regulatory protein, C terminal ISU54_RS00975 PF01272 Transcription elongation factor, GreA/GreB, C-term ISU54_RS00975 PF03449 Transcription elongation factor, N-terminal ISU54_RS00980 PF16921 Tex protein YqgF-like domain ISU54_RS00980 PF09371 Tex-like protein N-terminal domain ISU54_RS00980 PF00575 S1 RNA binding domain ISU54_RS00980 PF17674 HHH domain ISU54_RS00985 PF04023 FeoA domain ISU54_RS00990 PF07670 Nucleoside recognition ISU54_RS00990 PF02421 Ferrous iron transport protein B ISU54_RS00990 PF17910 FeoB cytosolic helical domain ISU54_RS00990 PF07664 Ferrous iron transport protein B C terminus ISU54_RS00995 PF09012 FeoC like transcriptional regulator ISU54_RS01000 PF07338 Protein of unknown function (DUF1471) ISU54_RS01005 PF00561 alpha/beta hydrolase fold ISU54_RS01010 PF00156 Phosphoribosyl transferase domain ISU54_RS01015 PF01106 NifU-like domain ISU54_RS01015 PF01521 Iron-sulphur cluster biosynthesis ISU54_RS01020 PF02446 4-alpha-glucanotransferase ISU54_RS01025 PF00343 Carbohydrate phosphorylase ISU54_RS01030 PF00343 Carbohydrate phosphorylase ISU54_RS01035 PF17874 MalT-like TPR region ISU54_RS01035 PF00196 Bacterial regulatory proteins, luxR family ISU54_RS01040 PF00581 Rhodanese-like domain ISU54_RS01045 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease ISU54_RS01045 PF01694 Rhomboid family ISU54_RS01050 PF08220 DeoR-like helix-turn-helix domain ISU54_RS01050 PF00455 DeoR C terminal sensor domain ISU54_RS01075 PF01266 FAD dependent oxidoreductase ISU54_RS01075 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ISU54_RS01080 PF00343 Carbohydrate phosphorylase ISU54_RS01085 PF08323 Starch synthase catalytic domain ISU54_RS01085 PF00534 Glycosyl transferases group 1 ISU54_RS01090 PF00483 Nucleotidyl transferase ISU54_RS01095 PF00128 Alpha amylase, catalytic domain ISU54_RS01095 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ISU54_RS01095 PF18390 Glycogen debranching enzyme C-terminal domain ISU54_RS01100 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ISU54_RS01100 PF02806 Alpha amylase, C-terminal all-beta domain ISU54_RS01100 PF00128 Alpha amylase, catalytic domain ISU54_RS01105 PF07694 5TMR of 5TMR-LYT ISU54_RS01105 PF06580 Histidine kinase ISU54_RS01110 PF02369 Bacterial Ig-like domain (group 1) ISU54_RS01110 PF09134 Invasin, domain 3 ISU54_RS01110 PF07979 Intimin C-type lectin domain ISU54_RS01110 PF11924 Inverse autotransporter, beta-domain ISU54_RS01140 PF01118 Semialdehyde dehydrogenase, NAD binding domain ISU54_RS01140 PF02774 Semialdehyde dehydrogenase, dimerisation domain ISU54_RS01145 PF01914 MarC family integral membrane protein ISU54_RS01160 PF01202 Shikimate kinase ISU54_RS01165 PF02447 GntP family permease ISU54_RS01170 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU54_RS01170 PF00356 Bacterial regulatory proteins, lacI family ISU54_RS01175 PF02678 Pirin ISU54_RS01175 PF17954 Quercetinase C-terminal cupin domain ISU54_RS01185 PF00486 Transcriptional regulatory protein, C terminal ISU54_RS01185 PF00072 Response regulator receiver domain ISU54_RS01195 PF01116 Fructose-bisphosphate aldolase class-II ISU54_RS01205 PF13407 Periplasmic binding protein domain ISU54_RS01210 PF02653 Branched-chain amino acid transport system / permease component ISU54_RS01215 PF00005 ABC transporter ISU54_RS01220 PF00072 Response regulator receiver domain ISU54_RS01220 PF13188 PAS domain ISU54_RS01220 PF00512 His Kinase A (phospho-acceptor) domain ISU54_RS01220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU54_RS01220 PF08448 PAS fold ISU54_RS01230 PF01384 Phosphate transporter family ISU54_RS01235 PF01797 Transposase IS200 like ISU54_RS01240 PF10625 Universal stress protein B (UspB) ISU54_RS01245 PF00582 Universal stress protein family ISU54_RS01250 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ISU54_RS01250 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ISU54_RS01255 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) ISU54_RS01255 PF00413 Matrixin ISU54_RS01255 PF08548 Peptidase M10 serralysin C terminal ISU54_RS01260 PF04445 Putative SAM-dependent methyltransferase ISU54_RS01265 PF01432 Peptidase family M3 ISU54_RS01270 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ ISU54_RS01275 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISU54_RS01275 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU54_RS01280 PF13556 PucR C-terminal helix-turn-helix domain ISU54_RS01280 PF17853 GGDEF-like domain ISU54_RS01280 PF05651 Putative sugar diacid recognition ISU54_RS01290 PF02447 GntP family permease ISU54_RS01295 PF02595 Glycerate kinase family ISU54_RS01320 PF03631 Virulence factor BrkB ISU54_RS01325 PF02611 CDP-diacylglycerol pyrophosphatase ISU54_RS01330 PF05170 AsmA family ISU54_RS01335 PF00563 EAL domain ISU54_RS01340 PF01361 Tautomerase enzyme ISU54_RS01345 PF00294 pfkB family carbohydrate kinase ISU54_RS01350 PF00675 Insulinase (Peptidase family M16) ISU54_RS01350 PF05193 Peptidase M16 inactive domain ISU54_RS01355 PF00375 Sodium:dicarboxylate symporter family ISU54_RS01365 PF06917 Periplasmic pectate lyase ISU54_RS01370 PF06178 Oligogalacturonate-specific porin protein (KdgM) ISU54_RS01375 PF17154 Gammaproteobacterial periplasmic sensor domain ISU54_RS01375 PF00990 Diguanylate cyclase, GGDEF domain ISU54_RS01375 PF00672 HAMP domain ISU54_RS01375 PF00563 EAL domain ISU54_RS01380 PF01270 Glycosyl hydrolases family 8 ISU54_RS01385 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU54_RS01385 PF00005 ABC transporter ISU54_RS01390 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU54_RS01390 PF00005 ABC transporter ISU54_RS01395 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS01395 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU54_RS01400 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS01405 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU54_RS01410 PF08479 POTRA domain, ShlB-type ISU54_RS01410 PF17287 POTRA domain ISU54_RS01410 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ISU54_RS01415 PF05860 haemagglutination activity domain ISU54_RS01415 PF13332 Hemagglutinin repeat ISU54_RS01415 PF04829 Pre-toxin domain with VENN motif ISU54_RS01415 PF05594 Haemagluttinin repeat ISU54_RS01425 PF07690 Major Facilitator Superfamily ISU54_RS01430 PF05231 MASE1 ISU54_RS01430 PF07730 Histidine kinase ISU54_RS01430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU54_RS01435 PF01695 IstB-like ATP binding protein ISU54_RS01440 PF00665 Integrase core domain ISU54_RS01440 PF02796 Helix-turn-helix domain of resolvase ISU54_RS01475 PF04204 Homoserine O-succinyltransferase ISU54_RS01480 PF01274 Malate synthase ISU54_RS01485 PF00463 Isocitrate lyase family ISU54_RS01490 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) ISU54_RS01500 PF02607 B12 binding domain ISU54_RS01500 PF02574 Homocysteine S-methyltransferase ISU54_RS01500 PF02310 B12 binding domain ISU54_RS01500 PF02965 Vitamin B12 dependent methionine synthase, activation domain ISU54_RS01500 PF00809 Pterin binding enzyme ISU54_RS01505 PF05860 haemagglutination activity domain ISU54_RS01505 PF13332 Hemagglutinin repeat ISU54_RS01515 PF00696 Amino acid kinase family ISU54_RS01515 PF01842 ACT domain ISU54_RS01520 PF00342 Phosphoglucose isomerase ISU54_RS01525 PF06146 Phosphate-starvation-inducible E ISU54_RS01530 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS01535 PF14785 Maltose transport system permease protein MalF P2 domain ISU54_RS01535 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS01540 PF01547 Bacterial extracellular solute-binding protein ISU54_RS01550 PF00005 ABC transporter ISU54_RS01550 PF17912 MalK OB fold domain ISU54_RS01555 PF02264 LamB porin ISU54_RS01560 PF07148 Maltose operon periplasmic protein precursor (MalM) ISU54_RS01570 PF05638 Type VI secretion system effector, Hcp ISU54_RS01580 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ISU54_RS01600 PF01695 IstB-like ATP binding protein ISU54_RS01605 PF00665 Integrase core domain ISU54_RS01605 PF02796 Helix-turn-helix domain of resolvase ISU54_RS01615 PF00691 OmpA family ISU54_RS01620 PF00990 Diguanylate cyclase, GGDEF domain ISU54_RS01620 PF17152 Periplasmic sensor domain ISU54_RS01630 PF00689 Cation transporting ATPase, C-terminus ISU54_RS01630 PF00690 Cation transporter/ATPase, N-terminus ISU54_RS01635 PF14718 Soluble lytic murein transglycosylase L domain ISU54_RS01635 PF01464 Transglycosylase SLT domain ISU54_RS01640 PF01371 Trp repressor protein ISU54_RS01645 PF01931 Protein of unknown function DUF84 ISU54_RS01650 PF00300 Histidine phosphatase superfamily (branch 1) ISU54_RS01655 PF12833 Helix-turn-helix domain ISU54_RS01655 PF06445 GyrI-like small molecule binding domain ISU54_RS01660 PF05981 CreA protein ISU54_RS01665 PF00486 Transcriptional regulatory protein, C terminal ISU54_RS01665 PF00072 Response regulator receiver domain ISU54_RS01670 PF08254 Threonine leader peptide ISU54_RS01675 PF00696 Amino acid kinase family ISU54_RS01675 PF01842 ACT domain ISU54_RS01675 PF13840 ACT domain ISU54_RS01675 PF00742 Homoserine dehydrogenase ISU54_RS01675 PF03447 Homoserine dehydrogenase, NAD binding domain ISU54_RS01680 PF00288 GHMP kinases N terminal domain ISU54_RS01680 PF08544 GHMP kinases C terminal ISU54_RS01685 PF00291 Pyridoxal-phosphate dependent enzyme ISU54_RS01685 PF14821 Threonine synthase N terminus ISU54_RS01690 PF03883 Peroxide stress protein YaaA ISU54_RS01700 PF00923 Transaldolase/Fructose-6-phosphate aldolase ISU54_RS01705 PF00994 Probable molybdopterin binding domain ISU54_RS01710 PF07690 Major Facilitator Superfamily ISU54_RS01720 PF01184 GPR1/FUN34/yaaH family ISU54_RS01725 PF00012 Hsp70 protein ISU54_RS01730 PF01556 DnaJ C terminal domain ISU54_RS01730 PF00684 DnaJ central domain ISU54_RS01730 PF00226 DnaJ domain ISU54_RS01735 PF06965 Na+/H+ antiporter 1 ISU54_RS01740 PF03466 LysR substrate binding domain ISU54_RS01740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU54_RS01745 PF01649 Ribosomal protein S20 ISU54_RS01750 PF01687 Riboflavin kinase ISU54_RS01750 PF06574 FAD synthetase ISU54_RS01755 PF00133 tRNA synthetases class I (I, L, M and V) ISU54_RS01755 PF08264 Anticodon-binding domain of tRNA ISU54_RS01755 PF06827 Zinc finger found in FPG and IleRS ISU54_RS01760 PF01252 Signal peptidase (SPase) II ISU54_RS01765 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISU54_RS01770 PF02401 LytB protein ISU54_RS01775 PF01797 Transposase IS200 like ISU54_RS01780 PF05173 Dihydrodipicolinate reductase, C-terminus ISU54_RS01780 PF01113 Dihydrodipicolinate reductase, N-terminus ISU54_RS01785 PF00117 Glutamine amidotransferase class-I ISU54_RS01785 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ISU54_RS01790 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ISU54_RS01790 PF02142 MGS-like domain ISU54_RS01790 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ISU54_RS01795 PF01810 LysE type translocator ISU54_RS01800 PF06738 Putative threonine/serine exporter ISU54_RS01805 PF12821 Threonine/Serine exporter, ThrE ISU54_RS01810 PF00186 Dihydrofolate reductase ISU54_RS01815 PF01797 Transposase IS200 like ISU54_RS01830 PF00149 Calcineurin-like phosphoesterase ISU54_RS01835 PF04379 ApaG domain ISU54_RS01840 PF00398 Ribosomal RNA adenine dimethylase ISU54_RS01845 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ISU54_RS01850 PF09312 SurA N-terminal domain ISU54_RS01850 PF00639 PPIC-type PPIASE domain ISU54_RS01855 PF03968 OstA-like protein ISU54_RS01855 PF04453 LPS transport system D ISU54_RS01860 PF00226 DnaJ domain ISU54_RS01860 PF05099 Tellurite resistance protein TerB ISU54_RS01865 PF00849 RNA pseudouridylate synthase ISU54_RS01880 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 ISU54_RS01885 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ISU54_RS01900 PF05947 Type VI secretion system, TssF ISU54_RS01910 PF17871 AAA lid domain ISU54_RS01910 PF10431 C-terminal, D2-small domain, of ClpB protein ISU54_RS01910 PF00004 ATPase family associated with various cellular activities (AAA) ISU54_RS01910 PF07724 AAA domain (Cdc48 subfamily) ISU54_RS01915 PF04717 Type VI secretion system, phage-baseplate injector ISU54_RS01915 PF06715 Gp5 C-terminal repeat (3 copies) ISU54_RS01945 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE ISU54_RS01950 PF05736 OprF membrane domain ISU54_RS01950 PF00691 OmpA family ISU54_RS01965 PF00176 SNF2 family N-terminal domain ISU54_RS01965 PF18339 RapA N-terminal Tudor like domain 1 ISU54_RS01965 PF18337 RapA N-terminal Tudor like domain ISU54_RS01965 PF00271 Helicase conserved C-terminal domain ISU54_RS01965 PF12137 RNA polymerase recycling family C-terminal ISU54_RS01970 PF03104 DNA polymerase family B, exonuclease domain ISU54_RS01970 PF00136 DNA polymerase family B ISU54_RS01975 PF09335 SNARE associated Golgi protein ISU54_RS01980 PF00005 ABC transporter ISU54_RS01985 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS01995 PF12793 Sugar transport-related sRNA regulator N-term ISU54_RS01995 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU54_RS02000 PF07690 Major Facilitator Superfamily ISU54_RS02005 PF00694 Aconitase C-terminal domain ISU54_RS02010 PF00330 Aconitase family (aconitate hydratase) ISU54_RS02015 PF00180 Isocitrate/isopropylmalate dehydrogenase ISU54_RS02020 PF08502 LeuA allosteric (dimerisation) domain ISU54_RS02020 PF00682 HMGL-like ISU54_RS02025 PF01797 Transposase IS200 like ISU54_RS02035 PF03466 LysR substrate binding domain ISU54_RS02035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU54_RS02040 PF00501 AMP-binding enzyme ISU54_RS02045 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU54_RS02045 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU54_RS02045 PF00205 Thiamine pyrophosphate enzyme, central domain ISU54_RS02050 PF10369 Small subunit of acetolactate synthase ISU54_RS02055 PF01797 Transposase IS200 like ISU54_RS02060 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU54_RS02060 PF00356 Bacterial regulatory proteins, lacI family ISU54_RS02065 PF06610 L-alanine exporter ISU54_RS02075 PF02381 MraZ protein, putative antitoxin-like ISU54_RS02080 PF01795 MraW methylase family ISU54_RS02085 PF04999 Cell division protein FtsL ISU54_RS02090 PF03717 Penicillin-binding Protein dimerisation domain ISU54_RS02090 PF00905 Penicillin binding protein transpeptidase domain ISU54_RS02095 PF01225 Mur ligase family, catalytic domain ISU54_RS02095 PF08245 Mur ligase middle domain ISU54_RS02095 PF02875 Mur ligase family, glutamate ligase domain ISU54_RS02100 PF02875 Mur ligase family, glutamate ligase domain ISU54_RS02100 PF01225 Mur ligase family, catalytic domain ISU54_RS02100 PF08245 Mur ligase middle domain ISU54_RS02105 PF00953 Glycosyl transferase family 4 ISU54_RS02105 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 ISU54_RS02110 PF02875 Mur ligase family, glutamate ligase domain ISU54_RS02110 PF08245 Mur ligase middle domain ISU54_RS02115 PF01098 Cell cycle protein ISU54_RS02120 PF03033 Glycosyltransferase family 28 N-terminal domain ISU54_RS02120 PF04101 Glycosyltransferase family 28 C-terminal domain ISU54_RS02125 PF08245 Mur ligase middle domain ISU54_RS02125 PF02875 Mur ligase family, glutamate ligase domain ISU54_RS02125 PF01225 Mur ligase family, catalytic domain ISU54_RS02130 PF07478 D-ala D-ala ligase C-terminus ISU54_RS02130 PF01820 D-ala D-ala ligase N-terminus ISU54_RS02135 PF08478 POTRA domain, FtsQ-type ISU54_RS02135 PF03799 Cell division protein FtsQ ISU54_RS02140 PF02491 SHS2 domain inserted in FTSA ISU54_RS02145 PF00091 Tubulin/FtsZ family, GTPase domain ISU54_RS02145 PF12327 FtsZ family, C-terminal domain ISU54_RS02150 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ISU54_RS02160 PF06558 Secretion monitor precursor protein (SecM) ISU54_RS02165 PF07516 SecA Wing and Scaffold domain ISU54_RS02165 PF01043 SecA preprotein cross-linking domain ISU54_RS02165 PF02810 SEC-C motif ISU54_RS02165 PF07517 SecA DEAD-like domain ISU54_RS02175 PF00293 NUDIX domain ISU54_RS02180 PF01695 IstB-like ATP binding protein ISU54_RS02185 PF02796 Helix-turn-helix domain of resolvase ISU54_RS02185 PF00665 Integrase core domain ISU54_RS02195 PF07681 DoxX ISU54_RS02205 PF07332 Putative Actinobacterial Holin-X, holin superfamily III ISU54_RS02210 PF05957 Bacterial protein of unknown function (DUF883) ISU54_RS02220 PF13721 SecD export protein N-terminal TM region ISU54_RS02225 PF09335 SNARE associated Golgi protein ISU54_RS02235 PF00392 Bacterial regulatory proteins, gntR family ISU54_RS02235 PF07729 FCD domain ISU54_RS02240 PF07690 Major Facilitator Superfamily ISU54_RS02245 PF02614 Glucuronate isomerase ISU54_RS02250 PF01232 Mannitol dehydrogenase Rossmann domain ISU54_RS02250 PF08125 Mannitol dehydrogenase C-terminal domain ISU54_RS02255 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus ISU54_RS02255 PF08666 SAF domain ISU54_RS02260 PF10688 Bacterial inner membrane protein ISU54_RS02265 PF01797 Transposase IS200 like ISU54_RS02270 PF00375 Sodium:dicarboxylate symporter family ISU54_RS02275 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ISU54_RS02280 PF01863 Protein of unknown function DUF45 ISU54_RS02290 PF05175 Methyltransferase small domain ISU54_RS02295 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU54_RS02295 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ISU54_RS02300 PF03729 Short repeat of unknown function (DUF308) ISU54_RS02315 PF00092 von Willebrand factor type A domain ISU54_RS02325 PF02342 TerD domain ISU54_RS02330 PF00092 von Willebrand factor type A domain ISU54_RS02335 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ISU54_RS02335 PF17287 POTRA domain ISU54_RS02335 PF08479 POTRA domain, ShlB-type ISU54_RS02340 PF13018 Extended Signal Peptide of Type V secretion system ISU54_RS02340 PF13332 Hemagglutinin repeat ISU54_RS02340 PF05860 haemagglutination activity domain ISU54_RS02340 PF04829 Pre-toxin domain with VENN motif ISU54_RS02350 PF13332 Hemagglutinin repeat ISU54_RS02350 PF04829 Pre-toxin domain with VENN motif ISU54_RS02355 PF04829 Pre-toxin domain with VENN motif ISU54_RS02355 PF13332 Hemagglutinin repeat ISU54_RS02370 PF04829 Pre-toxin domain with VENN motif ISU54_RS02370 PF13018 Extended Signal Peptide of Type V secretion system ISU54_RS02370 PF05860 haemagglutination activity domain ISU54_RS02370 PF13332 Hemagglutinin repeat ISU54_RS02375 PF05860 haemagglutination activity domain ISU54_RS02375 PF04829 Pre-toxin domain with VENN motif ISU54_RS02375 PF13332 Hemagglutinin repeat ISU54_RS02375 PF13018 Extended Signal Peptide of Type V secretion system ISU54_RS02395 PF17912 MalK OB fold domain ISU54_RS02395 PF00005 ABC transporter ISU54_RS02395 PF03459 TOBE domain ISU54_RS02400 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain ISU54_RS02405 PF00356 Bacterial regulatory proteins, lacI family ISU54_RS02410 PF01547 Bacterial extracellular solute-binding protein ISU54_RS02415 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS02420 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS02430 PF01915 Glycosyl hydrolase family 3 C-terminal domain ISU54_RS02430 PF14310 Fibronectin type III-like domain ISU54_RS02430 PF00933 Glycosyl hydrolase family 3 N terminal domain ISU54_RS02440 PF04632 Fusaric acid resistance protein family ISU54_RS02445 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU54_RS02445 PF00529 HlyD membrane-fusion protein of T1SS ISU54_RS02460 PF00155 Aminotransferase class I and II ISU54_RS02480 PF01042 Endoribonuclease L-PSP ISU54_RS02500 PF03466 LysR substrate binding domain ISU54_RS02500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU54_RS02545 PF04539 Sigma-70 region 3 ISU54_RS02545 PF00140 Sigma-70 factor, region 1.2 ISU54_RS02545 PF04545 Sigma-70, region 4 ISU54_RS02545 PF03979 Sigma-70 factor, region 1.1 ISU54_RS02545 PF04546 Sigma-70, non-essential region ISU54_RS02545 PF04542 Sigma-70 region 2 ISU54_RS02550 PF08278 DNA primase DnaG DnaB-binding ISU54_RS02550 PF10410 DnaB-helicase binding domain of primase ISU54_RS02550 PF08275 DNA primase catalytic core, N-terminal domain ISU54_RS02550 PF01807 CHC2 zinc finger ISU54_RS02555 PF01165 Ribosomal protein S21 ISU54_RS02560 PF00814 Glycoprotease family ISU54_RS02565 PF02660 Glycerol-3-phosphate acyltransferase ISU54_RS02570 PF02152 Dihydroneopterin aldolase ISU54_RS02575 PF02673 Bacitracin resistance protein BacA ISU54_RS02580 PF12627 Probable RNA and SrmB- binding site of polymerase A ISU54_RS02580 PF01966 HD domain ISU54_RS02580 PF01743 Poly A polymerase head domain ISU54_RS02585 PF08239 Bacterial SH3 domain ISU54_RS02590 PF01928 CYTH domain ISU54_RS02595 PF08335 GlnD PII-uridylyltransferase ISU54_RS02595 PF03710 Glutamate-ammonia ligase adenylyltransferase ISU54_RS02600 PF01467 Cytidylyltransferase-like ISU54_RS02600 PF00294 pfkB family carbohydrate kinase ISU54_RS02605 PF13520 Amino acid permease ISU54_RS02615 PF04380 Membrane fusogenic activity ISU54_RS02620 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ISU54_RS02625 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ISU54_RS02630 PF03738 Glutathionylspermidine synthase preATP-grasp ISU54_RS02635 PF06693 Protein of unknown function (DUF1190) ISU54_RS02640 PF02321 Outer membrane efflux protein ISU54_RS02645 PF00293 NUDIX domain ISU54_RS02650 PF06853 Protein of unknown function (DUF1249) ISU54_RS02655 PF00149 Calcineurin-like phosphoesterase ISU54_RS02660 PF05728 Uncharacterised protein family (UPF0227) ISU54_RS02665 PF00204 DNA gyrase B ISU54_RS02665 PF00986 DNA gyrase B subunit, carboxyl terminus ISU54_RS02665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU54_RS02665 PF01751 Toprim domain ISU54_RS02670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU54_RS02670 PF03466 LysR substrate binding domain ISU54_RS02675 PF02525 Flavodoxin-like fold ISU54_RS02685 PF03989 DNA gyrase C-terminal domain, beta-propeller ISU54_RS02685 PF00521 DNA gyrase/topoisomerase IV, subunit A ISU54_RS02690 PF01553 Acyltransferase ISU54_RS02695 PF07732 Multicopper oxidase ISU54_RS02695 PF07731 Multicopper oxidase ISU54_RS02705 PF00248 Aldo/keto reductase family ISU54_RS02715 PF00465 Iron-containing alcohol dehydrogenase ISU54_RS02720 PF06719 AraC-type transcriptional regulator N-terminus ISU54_RS02720 PF12833 Helix-turn-helix domain ISU54_RS02725 PF09335 SNARE associated Golgi protein ISU54_RS02730 PF01053 Cys/Met metabolism PLP-dependent enzyme ISU54_RS02735 PF01618 MotA/TolQ/ExbB proton channel family ISU54_RS02740 PF02472 Biopolymer transport protein ExbD/TolR ISU54_RS02775 PF00437 Type II/IV secretion system protein ISU54_RS02790 PF04972 BON domain ISU54_RS02790 PF13629 Pilus formation protein N terminal region ISU54_RS02790 PF00263 Bacterial type II and III secretion system protein ISU54_RS02795 PF00263 Bacterial type II and III secretion system protein ISU54_RS02795 PF04972 BON domain ISU54_RS02795 PF13629 Pilus formation protein N terminal region ISU54_RS02810 PF01797 Transposase IS200 like ISU54_RS02815 PF00577 Outer membrane usher protein ISU54_RS02815 PF13953 PapC C-terminal domain ISU54_RS02815 PF13954 PapC N-terminal domain ISU54_RS02820 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU54_RS02820 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU54_RS02825 PF00419 Fimbrial protein ISU54_RS02825 PF09222 Fimbrial adhesin F17-AG, lectin domain ISU54_RS02830 PF01497 Periplasmic binding protein ISU54_RS02850 PF01312 FlhB HrpN YscU SpaS Family ISU54_RS02855 PF01311 Bacterial export proteins, family 1 ISU54_RS02860 PF01313 Bacterial export proteins, family 3 ISU54_RS02865 PF00813 FliP family ISU54_RS02870 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ISU54_RS02880 PF00158 Sigma-54 interaction domain ISU54_RS02880 PF00072 Response regulator receiver domain ISU54_RS02880 PF02954 Bacterial regulatory protein, Fis family ISU54_RS02885 PF02049 Flagellar hook-basal body complex protein FliE ISU54_RS02890 PF01514 Secretory protein of YscJ/FliF family ISU54_RS02890 PF08345 Flagellar M-ring protein C-terminal ISU54_RS02905 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU54_RS02905 PF18269 T3SS EscN ATPase C-terminal domain ISU54_RS02925 PF13144 Chaperone for flagella basal body P-ring formation ISU54_RS02930 PF00460 Flagella basal body rod protein ISU54_RS02935 PF00460 Flagella basal body rod protein ISU54_RS02935 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU54_RS02940 PF03963 Flagellar hook capping protein - N-terminal region ISU54_RS02940 PF13860 FlgD Ig-like domain ISU54_RS02940 PF13861 FlgD Tudor-like domain ISU54_RS02945 PF00460 Flagella basal body rod protein ISU54_RS02945 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU54_RS02945 PF07559 Flagellar basal body protein FlaE ISU54_RS02950 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU54_RS02950 PF00460 Flagella basal body rod protein ISU54_RS02955 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU54_RS02955 PF00460 Flagella basal body rod protein ISU54_RS02960 PF02107 Flagellar L-ring protein ISU54_RS02965 PF02119 Flagellar P-ring protein ISU54_RS02975 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU54_RS02975 PF00460 Flagella basal body rod protein ISU54_RS02995 PF18500 CadC C-terminal domain 1 ISU54_RS02995 PF00486 Transcriptional regulatory protein, C terminal ISU54_RS03000 PF00669 Bacterial flagellin N-terminal helical region ISU54_RS03000 PF00700 Bacterial flagellin C-terminal helical region ISU54_RS03015 PF00356 Bacterial regulatory proteins, lacI family ISU54_RS03020 PF00939 Sodium:sulfate symporter transmembrane region ISU54_RS03035 PF05593 RHS Repeat ISU54_RS03035 PF03527 RHS protein ISU54_RS03045 PF04717 Type VI secretion system, phage-baseplate injector ISU54_RS03050 PF12951 Passenger-associated-transport-repeat ISU54_RS03060 PF02447 GntP family permease ISU54_RS03075 PF00005 ABC transporter ISU54_RS03075 PF00664 ABC transporter transmembrane region ISU54_RS03080 PF00005 ABC transporter ISU54_RS03080 PF08021 Siderophore-interacting FAD-binding domain ISU54_RS03080 PF04954 Siderophore-interacting protein ISU54_RS03080 PF00664 ABC transporter transmembrane region ISU54_RS03090 PF00975 Thioesterase domain ISU54_RS03105 PF00550 Phosphopantetheine attachment site ISU54_RS03105 PF00668 Condensation domain ISU54_RS03105 PF08242 Methyltransferase domain ISU54_RS03105 PF00501 AMP-binding enzyme ISU54_RS03110 PF13193 AMP-binding enzyme C-terminal domain ISU54_RS03110 PF00668 Condensation domain ISU54_RS03110 PF00501 AMP-binding enzyme ISU54_RS03115 PF00668 Condensation domain ISU54_RS03115 PF00550 Phosphopantetheine attachment site ISU54_RS03115 PF00501 AMP-binding enzyme ISU54_RS03115 PF08242 Methyltransferase domain ISU54_RS03120 PF01695 IstB-like ATP binding protein ISU54_RS03125 PF02796 Helix-turn-helix domain of resolvase ISU54_RS03125 PF00665 Integrase core domain ISU54_RS03135 PF07715 TonB-dependent Receptor Plug Domain ISU54_RS03135 PF00593 TonB dependent receptor ISU54_RS03140 PF07687 Peptidase dimerisation domain ISU54_RS03140 PF01546 Peptidase family M20/M25/M40 ISU54_RS03145 PF03806 AbgT putative transporter family ISU54_RS03150 PF14496 C-terminal novel E3 ligase, LRR-interacting ISU54_RS03150 PF12468 Type III secretion system leucine rich repeat protein ISU54_RS03155 PF14496 C-terminal novel E3 ligase, LRR-interacting ISU54_RS03155 PF12468 Type III secretion system leucine rich repeat protein ISU54_RS03155 PF14496 C-terminal novel E3 ligase, LRR-interacting ISU54_RS03155 PF12468 Type III secretion system leucine rich repeat protein ISU54_RS03165 PF12468 Type III secretion system leucine rich repeat protein ISU54_RS03165 PF14496 C-terminal novel E3 ligase, LRR-interacting ISU54_RS03170 PF03797 Autotransporter beta-domain ISU54_RS03180 PF07906 ShET2 enterotoxin, N-terminal region ISU54_RS03185 PF00873 AcrB/AcrD/AcrF family ISU54_RS03190 PF00529 HlyD membrane-fusion protein of T1SS ISU54_RS03190 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU54_RS03200 PF00990 Diguanylate cyclase, GGDEF domain ISU54_RS03200 PF08447 PAS fold ISU54_RS03200 PF00563 EAL domain ISU54_RS03200 PF08448 PAS fold ISU54_RS03215 PF07715 TonB-dependent Receptor Plug Domain ISU54_RS03215 PF00593 TonB dependent receptor ISU54_RS03220 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ISU54_RS03225 PF04183 IucA / IucC family ISU54_RS03225 PF06276 Ferric iron reductase FhuF-like transporter ISU54_RS03260 PF03472 Autoinducer binding domain ISU54_RS03260 PF00196 Bacterial regulatory proteins, luxR family ISU54_RS03265 PF00765 Autoinducer synthase ISU54_RS03270 PF02517 CPBP intramembrane metalloprotease ISU54_RS03295 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ISU54_RS03310 PF00691 OmpA family ISU54_RS03310 PF05736 OprF membrane domain ISU54_RS03320 PF00004 ATPase family associated with various cellular activities (AAA) ISU54_RS03320 PF17871 AAA lid domain ISU54_RS03320 PF07724 AAA domain (Cdc48 subfamily) ISU54_RS03320 PF10431 C-terminal, D2-small domain, of ClpB protein ISU54_RS03325 PF04717 Type VI secretion system, phage-baseplate injector ISU54_RS03325 PF13296 Putative type VI secretion system Rhs element Vgr ISU54_RS03325 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) ISU54_RS03385 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ISU54_RS03385 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ISU54_RS03385 PF01276 Orn/Lys/Arg decarboxylase, major domain ISU54_RS03390 PF13407 Periplasmic binding protein domain ISU54_RS03395 PF00005 ABC transporter ISU54_RS03400 PF02653 Branched-chain amino acid transport system / permease component ISU54_RS03405 PF07715 TonB-dependent Receptor Plug Domain ISU54_RS03415 PF01464 Transglycosylase SLT domain ISU54_RS03415 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain ISU54_RS03420 PF04362 Bacterial Fe(2+) trafficking ISU54_RS03425 PF10576 Iron-sulfur binding domain of endonuclease III ISU54_RS03425 PF00730 HhH-GPD superfamily base excision DNA repair protein ISU54_RS03425 PF14815 NUDIX domain ISU54_RS03425 PF00633 Helix-hairpin-helix motif ISU54_RS03430 PF02390 Putative methyltransferase ISU54_RS03435 PF04320 Protein with unknown function (DUF469) ISU54_RS03440 PF04960 Glutaminase ISU54_RS03445 PF11101 Protein of unknown function (DUF2884) ISU54_RS03450 PF11101 Protein of unknown function (DUF2884) ISU54_RS03460 PF12146 Serine aminopeptidase, S33 ISU54_RS03460 PF07634 RtxA repeat ISU54_RS03460 PF11713 Peptidase C80 family ISU54_RS03460 PF16671 Actin cross-linking domain ISU54_RS03460 PF11647 Membrane Localization Domain ISU54_RS03465 PF06969 HemN C-terminal domain ISU54_RS03465 PF04055 Radical SAM superfamily ISU54_RS03470 PF01725 Ham1 family ISU54_RS03475 PF02594 Uncharacterised ACR, YggU family COG1872 ISU54_RS03480 PF02325 YGGT family ISU54_RS03485 PF03807 NADP oxidoreductase coenzyme F420-dependent ISU54_RS03485 PF14748 Pyrroline-5-carboxylate reductase dimerisation ISU54_RS03490 PF01168 Alanine racemase, N-terminal domain ISU54_RS03495 PF00437 Type II/IV secretion system protein ISU54_RS03500 PF04371 Porphyromonas-type peptidyl-arginine deiminase ISU54_RS03505 PF00795 Carbon-nitrogen hydrolase ISU54_RS03510 PF03652 Holliday junction resolvase ISU54_RS03515 PF02622 Uncharacterized ACR, COG1678 ISU54_RS03520 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ISU54_RS03520 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ISU54_RS03525 PF04452 RNA methyltransferase ISU54_RS03530 PF04231 Endonuclease I ISU54_RS03535 PF17283 SprT-like zinc ribbon domain ISU54_RS03535 PF10263 SprT-like family ISU54_RS03540 PF02773 S-adenosylmethionine synthetase, C-terminal domain ISU54_RS03540 PF00438 S-adenosylmethionine synthetase, N-terminal domain ISU54_RS03540 PF02772 S-adenosylmethionine synthetase, central domain ISU54_RS03545 PF17810 Arginine decarboxylase helical bundle domain ISU54_RS03545 PF17944 Arginine decarboxylase C-terminal helical extension ISU54_RS03545 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ISU54_RS03550 PF00355 Rieske [2Fe-2S] domain ISU54_RS03560 PF01435 Peptidase family M48 ISU54_RS03565 PF00456 Transketolase, thiamine diphosphate binding domain ISU54_RS03565 PF02780 Transketolase, C-terminal domain ISU54_RS03565 PF02779 Transketolase, pyrimidine binding domain ISU54_RS03570 PF01797 Transposase IS200 like ISU54_RS03575 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ISU54_RS03575 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ISU54_RS03580 PF00162 Phosphoglycerate kinase ISU54_RS03585 PF01116 Fructose-bisphosphate aldolase class-II ISU54_RS03595 PF00924 Mechanosensitive ion channel ISU54_RS03595 PF05552 Conserved TM helix ISU54_RS03600 PF01810 LysE type translocator ISU54_RS03605 PF04402 Protein of unknown function (DUF541) ISU54_RS03610 PF03466 LysR substrate binding domain ISU54_RS03610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU54_RS03615 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ISU54_RS03620 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU54_RS03620 PF01842 ACT domain ISU54_RS03620 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU54_RS03630 PF01812 5-formyltetrahydrofolate cyclo-ligase family ISU54_RS03640 PF05164 Cell division protein ZapA ISU54_RS03645 PF03695 Uncharacterised protein family (UPF0149) ISU54_RS03650 PF05195 Aminopeptidase P, N-terminal domain ISU54_RS03650 PF00557 Metallopeptidase family M24 ISU54_RS03655 PF01494 FAD binding domain ISU54_RS03660 PF01494 FAD binding domain ISU54_RS03665 PF08669 Glycine cleavage T-protein C-terminal barrel domain ISU54_RS03665 PF01571 Aminomethyltransferase folate-binding domain ISU54_RS03670 PF01597 Glycine cleavage H-protein ISU54_RS03675 PF02347 Glycine cleavage system P-protein ISU54_RS03705 PF03006 Haemolysin-III related ISU54_RS03715 PF01571 Aminomethyltransferase folate-binding domain ISU54_RS03720 PF03937 Flavinator of succinate dehydrogenase ISU54_RS03725 PF07254 Membrane-bound toxin component of toxin-antitoxin system ISU54_RS03730 PF00072 Response regulator receiver domain ISU54_RS03730 PF00486 Transcriptional regulatory protein, C terminal ISU54_RS03735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU54_RS03735 PF00512 His Kinase A (phospho-acceptor) domain ISU54_RS03735 PF00672 HAMP domain ISU54_RS03740 PF06123 Inner membrane protein CreD ISU54_RS03745 PF00258 Flavodoxin ISU54_RS03750 PF02899 Phage integrase, N-terminal SAM-like domain ISU54_RS03750 PF00589 Phage integrase family ISU54_RS03755 PF13098 Thioredoxin-like domain ISU54_RS03755 PF10411 Disulfide bond isomerase protein N-terminus ISU54_RS03760 PF17768 RecJ OB domain ISU54_RS03760 PF02272 DHHA1 domain ISU54_RS03760 PF01368 DHH family ISU54_RS03770 PF00152 tRNA synthetases class II (D, K and N) ISU54_RS03770 PF01336 OB-fold nucleic acid binding domain ISU54_RS03780 PF13356 Arm DNA-binding domain ISU54_RS03780 PF00589 Phage integrase family ISU54_RS03780 PF14659 Phage integrase, N-terminal SAM-like domain ISU54_RS03800 PF15723 Motility quorum-sensing regulator, toxin of MqsA ISU54_RS03805 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA ISU54_RS03895 PF03551 Transcriptional regulator PadR-like family ISU54_RS03900 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family ISU54_RS03910 PF13407 Periplasmic binding protein domain ISU54_RS03915 PF02653 Branched-chain amino acid transport system / permease component ISU54_RS03920 PF00005 ABC transporter ISU54_RS03925 PF00005 ABC transporter ISU54_RS03925 PF17912 MalK OB fold domain ISU54_RS03930 PF13416 Bacterial extracellular solute-binding protein ISU54_RS03935 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS03940 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS03945 PF07745 Glycosyl hydrolase family 53 ISU54_RS03950 PF02449 Beta-galactosidase ISU54_RS03950 PF08533 Beta-galactosidase C-terminal domain ISU54_RS03950 PF08532 Beta-galactosidase trimerisation domain ISU54_RS03955 PF00367 phosphotransferase system, EIIB ISU54_RS03955 PF02378 Phosphotransferase system, EIIC ISU54_RS03960 PF02264 LamB porin ISU54_RS03965 PF00356 Bacterial regulatory proteins, lacI family ISU54_RS03970 PF17137 Domain of unknown function (DUF5110) ISU54_RS03970 PF16338 Domain of unknown function (DUF4968) ISU54_RS03970 PF01055 Glycosyl hydrolases family 31 ISU54_RS03970 PF13802 Galactose mutarotase-like ISU54_RS03975 PF07690 Major Facilitator Superfamily ISU54_RS03980 PF00356 Bacterial regulatory proteins, lacI family ISU54_RS03990 PF01116 Fructose-bisphosphate aldolase class-II ISU54_RS04000 PF00884 Sulfatase ISU54_RS04005 PF13186 Iron-sulfur cluster-binding domain ISU54_RS04005 PF04055 Radical SAM superfamily ISU54_RS04010 PF07470 Glycosyl Hydrolase Family 88 ISU54_RS04020 PF01979 Amidohydrolase family ISU54_RS04025 PF03610 PTS system fructose IIA component ISU54_RS04030 PF03613 PTS system mannose/fructose/sorbose family IID component ISU54_RS04035 PF03609 PTS system sorbose-specific iic component ISU54_RS04040 PF03830 PTS system sorbose subfamily IIB component ISU54_RS04045 PF01380 SIS domain ISU54_RS04050 PF08013 Tagatose 6 phosphate kinase ISU54_RS04055 PF00455 DeoR C terminal sensor domain ISU54_RS04055 PF08220 DeoR-like helix-turn-helix domain ISU54_RS04060 PF00884 Sulfatase ISU54_RS04065 PF01797 Transposase IS200 like ISU54_RS04070 PF00665 Integrase core domain ISU54_RS04070 PF02796 Helix-turn-helix domain of resolvase ISU54_RS04075 PF01695 IstB-like ATP binding protein ISU54_RS04080 PF09093 Lyase, catalytic ISU54_RS04080 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain ISU54_RS04080 PF02278 Polysaccharide lyase family 8, super-sandwich domain ISU54_RS04080 PF09092 Lyase, N terminal ISU54_RS04100 PF00484 Carbonic anhydrase ISU54_RS04115 PF03958 Bacterial type II/III secretion system short domain ISU54_RS04115 PF00263 Bacterial type II and III secretion system protein ISU54_RS04120 PF00437 Type II/IV secretion system protein ISU54_RS04130 PF07963 Prokaryotic N-terminal methylation motif ISU54_RS04130 PF08334 Type II secretion system (T2SS), protein G ISU54_RS04140 PF02501 Type II secretion system (T2SS), protein I ISU54_RS04140 PF07963 Prokaryotic N-terminal methylation motif ISU54_RS04145 PF07963 Prokaryotic N-terminal methylation motif ISU54_RS04145 PF11612 Type II secretion system (T2SS), protein J ISU54_RS04165 PF06750 Bacterial Peptidase A24 N-terminal domain ISU54_RS04165 PF01478 Type IV leader peptidase family ISU54_RS04185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU54_RS04185 PF02203 Tar ligand binding domain homologue ISU54_RS04185 PF00672 HAMP domain ISU54_RS04200 PF03466 LysR substrate binding domain ISU54_RS04200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU54_RS04205 PF07690 Major Facilitator Superfamily ISU54_RS04210 PF03466 LysR substrate binding domain ISU54_RS04210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU54_RS04215 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ISU54_RS04215 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ISU54_RS04220 PF00356 Bacterial regulatory proteins, lacI family ISU54_RS04225 PF01568 Molydopterin dinucleotide binding domain ISU54_RS04225 PF00384 Molybdopterin oxidoreductase ISU54_RS04230 PF01553 Acyltransferase ISU54_RS04230 PF00501 AMP-binding enzyme ISU54_RS04230 PF13193 AMP-binding enzyme C-terminal domain ISU54_RS04235 PF07690 Major Facilitator Superfamily ISU54_RS04250 PF00248 Aldo/keto reductase family ISU54_RS04255 PF02976 DNA mismatch repair enzyme MutH ISU54_RS04260 PF00293 NUDIX domain ISU54_RS04265 PF01590 GAF domain ISU54_RS04265 PF00391 PEP-utilising enzyme, mobile domain ISU54_RS04265 PF02896 PEP-utilising enzyme, TIM barrel domain ISU54_RS04265 PF05524 PEP-utilising enzyme, N-terminal ISU54_RS04270 PF01790 Prolipoprotein diacylglyceryl transferase ISU54_RS04275 PF00303 Thymidylate synthase ISU54_RS04300 PF17946 RecC C-terminal domain ISU54_RS04305 PF16187 Middle or third domain of peptidase_M16 ISU54_RS04305 PF00675 Insulinase (Peptidase family M16) ISU54_RS04305 PF05193 Peptidase M16 inactive domain ISU54_RS04310 PF12705 PD-(D/E)XK nuclease superfamily ISU54_RS04310 PF00580 UvrD/REP helicase N-terminal domain ISU54_RS04310 PF13361 UvrD-like helicase C-terminal domain ISU54_RS04315 PF13538 UvrD-like helicase C-terminal domain ISU54_RS04320 PF00696 Amino acid kinase family ISU54_RS04320 PF00583 Acetyltransferase (GNAT) family ISU54_RS04325 PF11741 AMIN domain ISU54_RS04325 PF01520 N-acetylmuramoyl-L-alanine amidase ISU54_RS04340 PF03562 MltA specific insert domain ISU54_RS04340 PF06725 3D domain ISU54_RS04345 PF00899 ThiF family ISU54_RS04350 PF02657 Fe-S metabolism associated domain ISU54_RS04355 PF00266 Aminotransferase class-V ISU54_RS04365 PF03466 LysR substrate binding domain ISU54_RS04365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU54_RS04370 PF04241 Protein of unknown function (DUF423) ISU54_RS04375 PF18125 RlmM ferredoxin-like domain ISU54_RS04375 PF01728 FtsJ-like methyltransferase ISU54_RS04380 PF01367 5'-3' exonuclease, C-terminal SAM fold ISU54_RS04380 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ISU54_RS04385 PF01695 IstB-like ATP binding protein ISU54_RS04390 PF00665 Integrase core domain ISU54_RS04390 PF02796 Helix-turn-helix domain of resolvase ISU54_RS04395 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases ISU54_RS04395 PF03641 Possible lysine decarboxylase ISU54_RS04395 PF11892 Domain of unknown function (DUF3412) ISU54_RS04400 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term ISU54_RS04400 PF14489 QueF-like protein ISU54_RS04405 PF07348 Syd protein (SUKH-2) ISU54_RS04410 PF01797 Transposase IS200 like ISU54_RS04415 PF04287 tRNA pseudouridine synthase C ISU54_RS04420 PF00849 RNA pseudouridylate synthase ISU54_RS04425 PF00258 Flavodoxin ISU54_RS04430 PF11944 Protein of unknown function (DUF3461) ISU54_RS04435 PF00132 Bacterial transferase hexapeptide (six repeats) ISU54_RS04435 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal ISU54_RS04435 PF14602 Hexapeptide repeat of succinyl-transferase ISU54_RS04440 PF01966 HD domain ISU54_RS04440 PF01842 ACT domain ISU54_RS04440 PF01909 Nucleotidyltransferase domain ISU54_RS04440 PF08335 GlnD PII-uridylyltransferase ISU54_RS04445 PF00557 Metallopeptidase family M24 ISU54_RS04450 PF00318 Ribosomal protein S2 ISU54_RS04455 PF00889 Elongation factor TS ISU54_RS04460 PF00696 Amino acid kinase family ISU54_RS04465 PF01765 Ribosome recycling factor ISU54_RS04470 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ISU54_RS04470 PF13288 DXP reductoisomerase C-terminal domain ISU54_RS04470 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ISU54_RS04475 PF01255 Putative undecaprenyl diphosphate synthase ISU54_RS04485 PF17820 PDZ domain ISU54_RS04485 PF02163 Peptidase family M50 ISU54_RS04490 PF01103 Surface antigen ISU54_RS04490 PF07244 Surface antigen variable number repeat ISU54_RS04495 PF03938 Outer membrane protein (OmpH-like) ISU54_RS04500 PF00132 Bacterial transferase hexapeptide (six repeats) ISU54_RS04500 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ISU54_RS04505 PF07977 FabA-like domain ISU54_RS04510 PF00132 Bacterial transferase hexapeptide (six repeats) ISU54_RS04510 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ISU54_RS04515 PF02684 Lipid-A-disaccharide synthetase ISU54_RS04520 PF01351 Ribonuclease HII ISU54_RS04525 PF07733 Bacterial DNA polymerase III alpha NTPase domain ISU54_RS04525 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ISU54_RS04525 PF14579 Helix-hairpin-helix motif ISU54_RS04525 PF02811 PHP domain ISU54_RS04525 PF01336 OB-fold nucleic acid binding domain ISU54_RS04530 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ISU54_RS04535 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ISU54_RS04540 PF11734 TilS substrate C-terminal domain ISU54_RS04540 PF09179 TilS substrate binding domain ISU54_RS04540 PF01171 PP-loop family ISU54_RS04545 PF00034 Cytochrome c ISU54_RS04550 PF07073 Modulator of Rho-dependent transcription termination (ROF) ISU54_RS04555 PF06786 Uncharacterised protein family (UPF0253) ISU54_RS04560 PF07152 YaeQ protein ISU54_RS04565 PF00472 RF-1 domain ISU54_RS04570 PF04170 NlpE N-terminal domain ISU54_RS04570 PF17185 NlpE C-terminal OB domain ISU54_RS04575 PF03129 Anticodon binding domain ISU54_RS04575 PF04073 Aminoacyl-tRNA editing domain ISU54_RS04575 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ISU54_RS04580 PF18389 TrmO C-terminal domain ISU54_RS04580 PF01980 tRNA-methyltransferase O ISU54_RS04585 PF16358 RcsF lipoprotein ISU54_RS04590 PF03180 NLPA lipoprotein ISU54_RS04595 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS04600 PF09383 NIL domain ISU54_RS04600 PF00005 ABC transporter ISU54_RS04635 PF00248 Aldo/keto reductase family ISU54_RS04645 PF03372 Endonuclease/Exonuclease/phosphatase family ISU54_RS04650 PF01476 LysM domain ISU54_RS04650 PF01464 Transglycosylase SLT domain ISU54_RS04655 PF16123 Hydroxyacylglutathione hydrolase C-terminus ISU54_RS04655 PF00753 Metallo-beta-lactamase superfamily ISU54_RS04660 PF08241 Methyltransferase domain ISU54_RS04665 PF00075 RNase H ISU54_RS04670 PF00929 Exonuclease ISU54_RS04680 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ISU54_RS04690 PF01695 IstB-like ATP binding protein ISU54_RS04695 PF00665 Integrase core domain ISU54_RS04695 PF02796 Helix-turn-helix domain of resolvase ISU54_RS04705 PF05973 Phage derived protein Gp49-like (DUF891) ISU54_RS04755 PF13356 Arm DNA-binding domain ISU54_RS04755 PF00589 Phage integrase family ISU54_RS04760 PF01797 Transposase IS200 like ISU54_RS04770 PF01668 SmpB protein ISU54_RS04775 PF03364 Polyketide cyclase / dehydrase and lipid transport ISU54_RS04780 PF03658 RnfH family Ubiquitin ISU54_RS04785 PF04355 SmpA / OmlA family ISU54_RS04790 PF02463 RecF/RecN/SMC N terminal domain ISU54_RS04795 PF01513 ATP-NAD kinase ISU54_RS04800 PF01025 GrpE ISU54_RS04805 PF00285 Citrate synthase, C-terminal domain ISU54_RS04810 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ISU54_RS04815 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ISU54_RS04820 PF02910 Fumarate reductase flavoprotein C-term ISU54_RS04820 PF00890 FAD binding domain ISU54_RS04825 PF13085 2Fe-2S iron-sulfur cluster binding domain ISU54_RS04830 PF00676 Dehydrogenase E1 component ISU54_RS04830 PF16078 2-oxoglutarate dehydrogenase N-terminus ISU54_RS04830 PF02779 Transketolase, pyrimidine binding domain ISU54_RS04830 PF16870 2-oxoglutarate dehydrogenase C-terminal ISU54_RS04835 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ISU54_RS04835 PF00364 Biotin-requiring enzyme ISU54_RS04835 PF02817 e3 binding domain ISU54_RS04840 PF00549 CoA-ligase ISU54_RS04840 PF08442 ATP-grasp domain ISU54_RS04845 PF02629 CoA binding domain ISU54_RS04845 PF00549 CoA-ligase ISU54_RS04850 PF01654 Cytochrome bd terminal oxidase subunit I ISU54_RS04855 PF02322 Cytochrome bd terminal oxidase subunit II ISU54_RS04860 PF08173 Membrane bound YbgT-like protein ISU54_RS04865 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) ISU54_RS04870 PF03061 Thioesterase superfamily ISU54_RS04875 PF01618 MotA/TolQ/ExbB proton channel family ISU54_RS04880 PF02472 Biopolymer transport protein ExbD/TolR ISU54_RS04885 PF06519 TolA C-terminal ISU54_RS04885 PF06519 TolA C-terminal ISU54_RS04890 PF04052 TolB amino-terminal domain ISU54_RS04890 PF07676 WD40-like Beta Propeller Repeat ISU54_RS04895 PF00691 OmpA family ISU54_RS04900 PF13174 Tetratricopeptide repeat ISU54_RS04900 PF16331 TolA binding protein trimerisation ISU54_RS04920 PF02445 Quinolinate synthetase A protein ISU54_RS04925 PF04973 Nicotinamide mononucleotide transporter ISU54_RS04930 PF01545 Cation efflux family ISU54_RS04935 PF00793 DAHP synthetase I family ISU54_RS04940 PF00300 Histidine phosphatase superfamily (branch 1) ISU54_RS04950 PF01263 Aldose 1-epimerase ISU54_RS04960 PF10509 Galactokinase galactose-binding signature ISU54_RS04960 PF08544 GHMP kinases C terminal ISU54_RS04960 PF00288 GHMP kinases N terminal domain ISU54_RS04965 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain ISU54_RS04965 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain ISU54_RS04970 PF16363 GDP-mannose 4,6 dehydratase ISU54_RS04980 PF00005 ABC transporter ISU54_RS04985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU54_RS04985 PF03459 TOBE domain ISU54_RS04990 PF10766 Multidrug efflux pump-associated protein AcrZ ISU54_RS05000 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS05005 PF00005 ABC transporter ISU54_RS05005 PF03459 TOBE domain ISU54_RS05015 PF10282 Lactonase, 7-bladed beta-propeller ISU54_RS05020 PF00202 Aminotransferase class-III ISU54_RS05025 PF04055 Radical SAM superfamily ISU54_RS05025 PF06968 Biotin and Thiamin Synthesis associated domain ISU54_RS05030 PF00155 Aminotransferase class I and II ISU54_RS05035 PF08241 Methyltransferase domain ISU54_RS05045 PF09383 NIL domain ISU54_RS05045 PF00005 ABC transporter ISU54_RS05050 PF04851 Type III restriction enzyme, res subunit ISU54_RS05050 PF02151 UvrB/uvrC motif ISU54_RS05050 PF12344 Ultra-violet resistance protein B ISU54_RS05050 PF17757 UvrB interaction domain ISU54_RS05050 PF00271 Helicase conserved C-terminal domain ISU54_RS05055 PF09905 DNA-binding protein VF530 ISU54_RS05060 PF01933 Uncharacterised protein family UPF0052 ISU54_RS05065 PF06463 Molybdenum Cofactor Synthesis C ISU54_RS05065 PF04055 Radical SAM superfamily ISU54_RS05070 PF01967 MoaC family ISU54_RS05075 PF02597 ThiS family ISU54_RS05080 PF02391 MoaE protein ISU54_RS05085 PF01027 Inhibitor of apoptosis-promoting Bax1 ISU54_RS05090 PF01797 Transposase IS200 like ISU54_RS05100 PF01207 Dihydrouridine synthase (Dus) ISU54_RS05110 PF00768 D-alanyl-D-alanine carboxypeptidase ISU54_RS05115 PF09330 D-lactate dehydrogenase, membrane binding ISU54_RS05115 PF01565 FAD binding domain ISU54_RS05120 PF01928 CYTH domain ISU54_RS05125 PF01844 HNH endonuclease ISU54_RS05135 PF04226 Transglycosylase associated protein ISU54_RS05140 PF00005 ABC transporter ISU54_RS05150 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS05155 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS05160 PF07308 Protein of unknown function (DUF1456) ISU54_RS05165 PF02954 Bacterial regulatory protein, Fis family ISU54_RS05165 PF13188 PAS domain ISU54_RS05165 PF00158 Sigma-54 interaction domain ISU54_RS05170 PF02653 Branched-chain amino acid transport system / permease component ISU54_RS05175 PF02653 Branched-chain amino acid transport system / permease component ISU54_RS05180 PF00005 ABC transporter ISU54_RS05185 PF00005 ABC transporter ISU54_RS05200 PF00581 Rhodanese-like domain ISU54_RS05205 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ISU54_RS05210 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ISU54_RS05215 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS05220 PF00005 ABC transporter ISU54_RS05225 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS05230 PF13520 Amino acid permease ISU54_RS05235 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ISU54_RS05235 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ISU54_RS05235 PF01276 Orn/Lys/Arg decarboxylase, major domain ISU54_RS05245 PF00892 EamA-like transporter family ISU54_RS05250 PF00267 Gram-negative porin ISU54_RS05255 PF13307 Helicase C-terminal domain ISU54_RS05255 PF06733 DEAD_2 ISU54_RS05260 PF06628 Catalase-related immune-responsive ISU54_RS05260 PF00199 Catalase ISU54_RS05265 PF07437 YfaZ precursor ISU54_RS05270 PF03222 Tryptophan/tyrosine permease family ISU54_RS05275 PF00994 Probable molybdopterin binding domain ISU54_RS05280 PF03974 Ecotin ISU54_RS05285 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU54_RS05290 PF00268 Ribonucleotide reductase, small chain ISU54_RS05295 PF02867 Ribonucleotide reductase, barrel domain ISU54_RS05295 PF03477 ATP cone domain ISU54_RS05295 PF00317 Ribonucleotide reductase, all-alpha domain ISU54_RS05305 PF00521 DNA gyrase/topoisomerase IV, subunit A ISU54_RS05305 PF03989 DNA gyrase C-terminal domain, beta-propeller ISU54_RS05310 PF00512 His Kinase A (phospho-acceptor) domain ISU54_RS05310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU54_RS05310 PF00072 Response regulator receiver domain ISU54_RS05310 PF09456 RcsC Alpha-Beta-Loop (ABL) ISU54_RS05315 PF00072 Response regulator receiver domain ISU54_RS05315 PF00196 Bacterial regulatory proteins, luxR family ISU54_RS05320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU54_RS05320 PF01627 Hpt domain ISU54_RS05320 PF16359 RcsD-ABL domain ISU54_RS05325 PF16359 RcsD-ABL domain ISU54_RS05325 PF01627 Hpt domain ISU54_RS05325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU54_RS05330 PF07690 Major Facilitator Superfamily ISU54_RS05335 PF00267 Gram-negative porin ISU54_RS05340 PF01797 Transposase IS200 like ISU54_RS05355 PF00144 Beta-lactamase ISU54_RS05365 PF12706 Beta-lactamase superfamily domain ISU54_RS05370 PF00672 HAMP domain ISU54_RS05370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU54_RS05370 PF02743 Cache domain ISU54_RS05375 PF01278 Omptin family ISU54_RS05380 PF06183 DinI-like family ISU54_RS05385 PF00717 Peptidase S24-like ISU54_RS05385 PF01381 Helix-turn-helix ISU54_RS05390 PF06530 Phage antitermination protein Q ISU54_RS05395 PF17042 Nucleotide-binding C-terminal domain ISU54_RS05395 PF07005 Sugar-binding N-terminal domain ISU54_RS05405 PF00455 DeoR C terminal sensor domain ISU54_RS05405 PF08220 DeoR-like helix-turn-helix domain ISU54_RS05410 PF01261 Xylose isomerase-like TIM barrel ISU54_RS05430 PF17482 Phage tail sheath C-terminal domain ISU54_RS05430 PF04984 Phage tail sheath protein subtilisin-like domain ISU54_RS05470 PF04865 Baseplate J-like protein ISU54_RS05485 PF07484 Phage Tail Collar Domain ISU54_RS05490 PF01380 SIS domain ISU54_RS05490 PF01418 Helix-turn-helix domain, rpiR family ISU54_RS05495 PF00232 Glycosyl hydrolase family 1 ISU54_RS05515 PF05638 Type VI secretion system effector, Hcp ISU54_RS05530 PF00884 Sulfatase ISU54_RS05530 PF11893 Domain of unknown function (DUF3413) ISU54_RS05535 PF07208 Protein of unknown function (DUF1414) ISU54_RS05540 PF04245 37-kD nucleoid-associated bacterial protein ISU54_RS05545 PF01797 Transposase IS200 like ISU54_RS05550 PF01386 Ribosomal L25p family ISU54_RS05555 PF00271 Helicase conserved C-terminal domain ISU54_RS05555 PF04851 Type III restriction enzyme, res subunit ISU54_RS05560 PF00849 RNA pseudouridylate synthase ISU54_RS05560 PF01479 S4 domain ISU54_RS05565 PF07690 Major Facilitator Superfamily ISU54_RS05570 PF13989 YejG-like protein ISU54_RS05575 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU54_RS05575 PF00005 ABC transporter ISU54_RS05580 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU54_RS05580 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS05585 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS05590 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU54_RS05595 PF12792 CSS motif domain associated with EAL ISU54_RS05595 PF00563 EAL domain ISU54_RS05600 PF00877 NlpC/P60 family ISU54_RS05605 PF01569 PAP2 superfamily ISU54_RS05610 PF07683 Cobalamin synthesis protein cobW C-terminal domain ISU54_RS05610 PF02492 CobW/HypB/UreG, nucleotide-binding domain ISU54_RS05615 PF07729 FCD domain ISU54_RS05615 PF00392 Bacterial regulatory proteins, gntR family ISU54_RS05620 PF01232 Mannitol dehydrogenase Rossmann domain ISU54_RS05620 PF08125 Mannitol dehydrogenase C-terminal domain ISU54_RS05625 PF03786 D-mannonate dehydratase (UxuA) ISU54_RS05630 PF01132 Elongation factor P (EF-P) OB domain ISU54_RS05630 PF09285 Elongation factor P, C-terminal ISU54_RS05630 PF08207 Elongation factor P (EF-P) KOW-like domain ISU54_RS05635 PF03222 Tryptophan/tyrosine permease family ISU54_RS05640 PF03692 Putative zinc- or iron-chelating domain ISU54_RS05650 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU54_RS05650 PF01842 ACT domain ISU54_RS05650 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU54_RS05660 PF00171 Aldehyde dehydrogenase family ISU54_RS05665 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU54_RS05665 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU54_RS05670 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ISU54_RS05680 PF00005 ABC transporter ISU54_RS05685 PF02653 Branched-chain amino acid transport system / permease component ISU54_RS05690 PF00293 NUDIX domain ISU54_RS05695 PF00381 PTS HPr component phosphorylation site ISU54_RS05695 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ISU54_RS05700 PF00294 pfkB family carbohydrate kinase ISU54_RS05705 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ISU54_RS05705 PF02378 Phosphotransferase system, EIIC ISU54_RS05710 PF00486 Transcriptional regulatory protein, C terminal ISU54_RS05715 PF17550 Family of unknown function ISU54_RS05725 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU54_RS05725 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU54_RS05730 PF13953 PapC C-terminal domain ISU54_RS05730 PF13954 PapC N-terminal domain ISU54_RS05730 PF00577 Outer membrane usher protein ISU54_RS05735 PF01261 Xylose isomerase-like TIM barrel ISU54_RS05740 PF03601 Conserved hypothetical protein 698 ISU54_RS05745 PF03466 LysR substrate binding domain ISU54_RS05745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU54_RS05750 PF00324 Amino acid permease ISU54_RS05760 PF01032 FecCD transport family ISU54_RS05765 PF00005 ABC transporter ISU54_RS05770 PF07715 TonB-dependent Receptor Plug Domain ISU54_RS05770 PF00593 TonB dependent receptor ISU54_RS05775 PF00043 Glutathione S-transferase, C-terminal domain ISU54_RS05775 PF13417 Glutathione S-transferase, N-terminal domain ISU54_RS05790 PF03180 NLPA lipoprotein ISU54_RS05795 PF00005 ABC transporter ISU54_RS05795 PF09383 NIL domain ISU54_RS05800 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS05805 PF00768 D-alanyl-D-alanine carboxypeptidase ISU54_RS05805 PF07943 Penicillin-binding protein 5, C-terminal domain ISU54_RS05815 PF00455 DeoR C terminal sensor domain ISU54_RS05815 PF08220 DeoR-like helix-turn-helix domain ISU54_RS05820 PF01791 DeoC/LacD family aldolase ISU54_RS05825 PF01569 PAP2 superfamily ISU54_RS05835 PF06826 Predicted Permease Membrane Region ISU54_RS05835 PF02080 TrkA-C domain ISU54_RS05840 PF00462 Glutaredoxin ISU54_RS05845 PF07214 Protein of unknown function (DUF1418) ISU54_RS05850 PF10722 Putative bacterial sensory transduction regulator ISU54_RS05855 PF13416 Bacterial extracellular solute-binding protein ISU54_RS05860 PF00005 ABC transporter ISU54_RS05860 PF08402 TOBE domain ISU54_RS05865 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS05870 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS05875 PF10767 Protein of unknown function (DUF2593) ISU54_RS05880 PF05958 tRNA (Uracil-5-)-methyltransferase ISU54_RS05885 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU54_RS05910 PF01032 FecCD transport family ISU54_RS05915 PF01032 FecCD transport family ISU54_RS05920 PF00005 ABC transporter ISU54_RS05925 PF03059 Nicotianamine synthase protein ISU54_RS05930 PF10100 Staphylopine dehydrogenase ISU54_RS05935 PF00892 EamA-like transporter family ISU54_RS05945 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS05950 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS05955 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU54_RS05960 PF00005 ABC transporter ISU54_RS05965 PF01817 Chorismate mutase type II ISU54_RS05970 PF12883 Protein of unknown function (DUF3828) ISU54_RS05975 PF01370 NAD dependent epimerase/dehydratase family ISU54_RS05980 PF11066 Protein of unknown function (DUF2867) ISU54_RS05980 PF13460 NAD(P)H-binding ISU54_RS05985 PF01212 Beta-eliminating lyase ISU54_RS05995 PF00205 Thiamine pyrophosphate enzyme, central domain ISU54_RS05995 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU54_RS05995 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU54_RS06000 PF00970 Oxidoreductase FAD-binding domain ISU54_RS06000 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU54_RS06000 PF00175 Oxidoreductase NAD-binding domain ISU54_RS06005 PF03063 Prismane/CO dehydrogenase family ISU54_RS06010 PF03956 Lysine exporter LysO ISU54_RS06015 PF11398 Protein of unknown function (DUF2813) ISU54_RS06020 PF04393 Protein of unknown function (DUF535) ISU54_RS06025 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU54_RS06030 PF02687 FtsX-like permease family ISU54_RS06030 PF12704 MacB-like periplasmic core domain ISU54_RS06030 PF00005 ABC transporter ISU54_RS06035 PF00313 'Cold-shock' DNA-binding domain ISU54_RS06040 PF02617 ATP-dependent Clp protease adaptor protein ClpS ISU54_RS06045 PF17871 AAA lid domain ISU54_RS06045 PF02861 Clp amino terminal domain, pathogenicity island component ISU54_RS06045 PF10431 C-terminal, D2-small domain, of ClpB protein ISU54_RS06045 PF00004 ATPase family associated with various cellular activities (AAA) ISU54_RS06045 PF07724 AAA domain (Cdc48 subfamily) ISU54_RS06050 PF01797 Transposase IS200 like ISU54_RS06055 PF01176 Translation initiation factor 1A / IF-1 ISU54_RS06060 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ISU54_RS06065 PF00664 ABC transporter transmembrane region ISU54_RS06065 PF00005 ABC transporter ISU54_RS06070 PF00664 ABC transporter transmembrane region ISU54_RS06070 PF00005 ABC transporter ISU54_RS06075 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU54_RS06080 PF01037 Lrp/AsnC ligand binding domain ISU54_RS06085 PF01580 FtsK/SpoIIIE family ISU54_RS06085 PF09397 Ftsk gamma domain ISU54_RS06085 PF17854 FtsK alpha domain ISU54_RS06085 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ISU54_RS06090 PF03548 Outer membrane lipoprotein carrier protein LolA ISU54_RS06095 PF12002 MgsA AAA+ ATPase C terminal ISU54_RS06095 PF16193 AAA C-terminal domain ISU54_RS06095 PF00004 ATPase family associated with various cellular activities (AAA) ISU54_RS06100 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ISU54_RS06100 PF02403 Seryl-tRNA synthetase N-terminal domain ISU54_RS06110 PF01695 IstB-like ATP binding protein ISU54_RS06115 PF02796 Helix-turn-helix domain of resolvase ISU54_RS06115 PF00665 Integrase core domain ISU54_RS06125 PF04055 Radical SAM superfamily ISU54_RS06135 PF02901 Pyruvate formate lyase-like ISU54_RS06135 PF01228 Glycine radical ISU54_RS06140 PF01226 Formate/nitrite transporter ISU54_RS06145 PF18381 YcaO cyclodehydratase C-terminal domain ISU54_RS06145 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding ISU54_RS06150 PF17763 Glutaminase/Asparaginase C-terminal domain ISU54_RS06150 PF00710 Asparaginase, N-terminal ISU54_RS06155 PF05658 Head domain of trimeric autotransporter adhesin ISU54_RS06155 PF05662 Coiled stalk of trimeric autotransporter adhesin ISU54_RS06155 PF13018 Extended Signal Peptide of Type V secretion system ISU54_RS06155 PF03895 YadA-like membrane anchor domain ISU54_RS06155 PF05658 Head domain of trimeric autotransporter adhesin ISU54_RS06155 PF05662 Coiled stalk of trimeric autotransporter adhesin ISU54_RS06155 PF03895 YadA-like membrane anchor domain ISU54_RS06155 PF13018 Extended Signal Peptide of Type V secretion system ISU54_RS06165 PF00266 Aminotransferase class-V ISU54_RS06170 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ISU54_RS06175 PF02224 Cytidylate kinase ISU54_RS06180 PF00575 S1 RNA binding domain ISU54_RS06185 PF00216 Bacterial DNA-binding protein ISU54_RS06190 PF03772 Competence protein ISU54_RS06190 PF00753 Metallo-beta-lactamase superfamily ISU54_RS06195 PF00664 ABC transporter transmembrane region ISU54_RS06195 PF00005 ABC transporter ISU54_RS06200 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ISU54_RS06205 PF07063 Domain of unknown function (DUF1338) ISU54_RS06210 PF00313 'Cold-shock' DNA-binding domain ISU54_RS06215 PF03966 Trm112p-like protein ISU54_RS06220 PF02348 Cytidylyltransferase ISU54_RS06225 PF01636 Phosphotransferase enzyme family ISU54_RS06230 PF13847 Methyltransferase domain ISU54_RS06235 PF17193 MukF C-terminal domain ISU54_RS06235 PF17192 MukF middle domain ISU54_RS06235 PF03882 MukF winged-helix domain ISU54_RS06240 PF04288 MukE-like family ISU54_RS06245 PF04310 MukB N-terminal ISU54_RS06245 PF16330 MukB hinge domain ISU54_RS06250 PF01797 Transposase IS200 like ISU54_RS06255 PF01471 Putative peptidoglycan binding domain ISU54_RS06255 PF03734 L,D-transpeptidase catalytic domain ISU54_RS06260 PF05951 Bacterial protein of unknown function (DUF882) ISU54_RS06265 PF00753 Metallo-beta-lactamase superfamily ISU54_RS06275 PF00155 Aminotransferase class I and II ISU54_RS06280 PF00267 Gram-negative porin ISU54_RS06285 PF01336 OB-fold nucleic acid binding domain ISU54_RS06285 PF00152 tRNA synthetases class II (D, K and N) ISU54_RS06290 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ISU54_RS06290 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ISU54_RS06295 PF17432 Domain of unknown function (DUF3458_C) ARM repeats ISU54_RS06295 PF01433 Peptidase family M1 domain ISU54_RS06295 PF11940 Domain of unknown function (DUF3458) Ig-like fold ISU54_RS06300 PF01180 Dihydroorotate dehydrogenase ISU54_RS06305 PF07126 Cell-division protein ZapC ISU54_RS06310 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU54_RS06310 PF03476 MOSC N-terminal beta barrel domain ISU54_RS06310 PF03473 MOSC domain ISU54_RS06315 PF10672 S-adenosylmethionine-dependent methyltransferase ISU54_RS06315 PF01170 Putative RNA methylase family UPF0020 ISU54_RS06315 PF02926 THUMP domain ISU54_RS06320 PF00005 ABC transporter ISU54_RS06320 PF16326 ABC transporter C-terminal domain ISU54_RS06320 PF12848 ABC transporter ISU54_RS06325 PF04403 Paraquat-inducible protein A ISU54_RS06330 PF02470 MlaD protein ISU54_RS06335 PF03886 ABC-type transport auxiliary lipoprotein component ISU54_RS06340 PF04957 Ribosome modulation factor ISU54_RS06345 PF01797 Transposase IS200 like ISU54_RS06355 PF01695 IstB-like ATP binding protein ISU54_RS06360 PF02796 Helix-turn-helix domain of resolvase ISU54_RS06360 PF00665 Integrase core domain ISU54_RS06375 PF07977 FabA-like domain ISU54_RS06380 PF13654 AAA domain ISU54_RS06380 PF05362 Lon protease (S16) C-terminal proteolytic domain ISU54_RS06385 PF17414 MatP C-terminal ribbon-helix-helix domain ISU54_RS06385 PF06303 MatP N-terminal domain ISU54_RS06390 PF01797 Transposase IS200 like ISU54_RS06395 PF01389 OmpA-like transmembrane domain ISU54_RS06395 PF00691 OmpA family ISU54_RS06400 PF03846 Cell division inhibitor SulA ISU54_RS06405 PF04993 TfoX N-terminal domain ISU54_RS06405 PF04994 TfoX C-terminal domain ISU54_RS06410 PF12805 FUSC-like inner membrane protein yccS ISU54_RS06415 PF03733 Inner membrane component domain ISU54_RS06420 PF13361 UvrD-like helicase C-terminal domain ISU54_RS06420 PF12462 DNA helicase IV / RNA helicase N terminal ISU54_RS06420 PF00580 UvrD/REP helicase N-terminal domain ISU54_RS06425 PF02142 MGS-like domain ISU54_RS06430 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) ISU54_RS06435 PF13380 CoA binding domain ISU54_RS06440 PF08755 Hemimethylated DNA-binding protein YccV like ISU54_RS06445 PF10672 S-adenosylmethionine-dependent methyltransferase ISU54_RS06445 PF17785 PUA-like domain ISU54_RS06450 PF00708 Acylphosphatase ISU54_RS06455 PF04358 DsrC like protein ISU54_RS06475 PF08031 Berberine and berberine like ISU54_RS06475 PF01565 FAD binding domain ISU54_RS06490 PF07977 FabA-like domain ISU54_RS06495 PF02801 Beta-ketoacyl synthase, C-terminal domain ISU54_RS06495 PF00109 Beta-ketoacyl synthase, N-terminal domain ISU54_RS06505 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal ISU54_RS06505 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal ISU54_RS06515 PF00378 Enoyl-CoA hydratase/isomerase ISU54_RS06530 PF00550 Phosphopantetheine attachment site ISU54_RS06535 PF00698 Acyl transferase domain ISU54_RS06545 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ISU54_RS06560 PF00691 OmpA family ISU54_RS06560 PF05736 OprF membrane domain ISU54_RS06570 PF10431 C-terminal, D2-small domain, of ClpB protein ISU54_RS06570 PF07724 AAA domain (Cdc48 subfamily) ISU54_RS06570 PF17871 AAA lid domain ISU54_RS06570 PF00004 ATPase family associated with various cellular activities (AAA) ISU54_RS06575 PF13296 Putative type VI secretion system Rhs element Vgr ISU54_RS06575 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) ISU54_RS06575 PF04717 Type VI secretion system, phage-baseplate injector ISU54_RS06665 PF00005 ABC transporter ISU54_RS06665 PF12848 ABC transporter ISU54_RS06675 PF00872 Transposase, Mutator family ISU54_RS06680 PF00899 ThiF family ISU54_RS06685 PF03454 MoeA C-terminal region (domain IV) ISU54_RS06685 PF00994 Probable molybdopterin binding domain ISU54_RS06685 PF03453 MoeA N-terminal region (domain I and II) ISU54_RS06695 PF00005 ABC transporter ISU54_RS06700 PF13533 Biotin-lipoyl like ISU54_RS06715 PF00756 Putative esterase ISU54_RS06720 PF00107 Zinc-binding dehydrogenase ISU54_RS06720 PF08240 Alcohol dehydrogenase GroES-like domain ISU54_RS06725 PF03466 LysR substrate binding domain ISU54_RS06725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU54_RS06730 PF06779 Uncharacterised MFS-type transporter YbfB ISU54_RS06735 PF01227 GTP cyclohydrolase I ISU54_RS06740 PF04235 Protein of unknown function (DUF418) ISU54_RS06745 PF13407 Periplasmic binding protein domain ISU54_RS06750 PF00005 ABC transporter ISU54_RS06755 PF02653 Branched-chain amino acid transport system / permease component ISU54_RS06760 PF02698 DUF218 domain ISU54_RS06765 PF03949 Malic enzyme, NAD binding domain ISU54_RS06765 PF00390 Malic enzyme, N-terminal domain ISU54_RS06770 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region ISU54_RS06770 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ISU54_RS06775 PF04172 LrgB-like family ISU54_RS06780 PF03788 LrgA family ISU54_RS06785 PF07690 Major Facilitator Superfamily ISU54_RS06805 PF01797 Transposase IS200 like ISU54_RS06810 PF01588 Putative tRNA binding domain ISU54_RS06810 PF09334 tRNA synthetases class I (M) ISU54_RS06815 PF10609 NUBPL iron-transfer P-loop NTPase ISU54_RS06820 PF00485 Phosphoribulokinase / Uridine kinase family ISU54_RS06825 PF00692 dUTPase ISU54_RS06830 PF05170 AsmA family ISU54_RS06835 PF03741 Integral membrane protein TerC family ISU54_RS06835 PF03471 Transporter associated domain ISU54_RS06835 PF00571 CBS domain ISU54_RS06840 PF06276 Ferric iron reductase FhuF-like transporter ISU54_RS06840 PF11575 FhuF 2Fe-2S C-terminal domain ISU54_RS06845 PF00282 Pyridoxal-dependent decarboxylase conserved domain ISU54_RS06850 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ISU54_RS06860 PF06276 Ferric iron reductase FhuF-like transporter ISU54_RS06860 PF04183 IucA / IucC family ISU54_RS06865 PF00005 ABC transporter ISU54_RS06870 PF01032 FecCD transport family ISU54_RS06875 PF01032 FecCD transport family ISU54_RS06880 PF01497 Periplasmic binding protein ISU54_RS06885 PF07660 Secretin and TonB N terminus short domain ISU54_RS06885 PF07715 TonB-dependent Receptor Plug Domain ISU54_RS06885 PF00593 TonB dependent receptor ISU54_RS06895 PF00483 Nucleotidyl transferase ISU54_RS06900 PF00483 Nucleotidyl transferase ISU54_RS06905 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ISU54_RS06905 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ISU54_RS06910 PF01502 Phosphoribosyl-AMP cyclohydrolase ISU54_RS06910 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ISU54_RS06915 PF00977 Histidine biosynthesis protein ISU54_RS06920 PF00977 Histidine biosynthesis protein ISU54_RS06925 PF00117 Glutamine amidotransferase class-I ISU54_RS06930 PF00475 Imidazoleglycerol-phosphate dehydratase ISU54_RS06935 PF00155 Aminotransferase class I and II ISU54_RS06940 PF00815 Histidinol dehydrogenase ISU54_RS06945 PF01634 ATP phosphoribosyltransferase ISU54_RS06945 PF08029 HisG, C-terminal domain ISU54_RS06955 PF01370 NAD dependent epimerase/dehydratase family ISU54_RS06970 PF02653 Branched-chain amino acid transport system / permease component ISU54_RS06975 PF00005 ABC transporter ISU54_RS06980 PF00005 ABC transporter ISU54_RS06985 PF00465 Iron-containing alcohol dehydrogenase ISU54_RS06990 PF13520 Amino acid permease ISU54_RS07000 PF00929 Exonuclease ISU54_RS07000 PF08411 Exonuclease C-terminal ISU54_RS07010 PF04363 Protein of unknown function (DUF496) ISU54_RS07015 PF00872 Transposase, Mutator family ISU54_RS07020 PF02369 Bacterial Ig-like domain (group 1) ISU54_RS07020 PF11924 Inverse autotransporter, beta-domain ISU54_RS07020 PF09134 Invasin, domain 3 ISU54_RS07025 PF07690 Major Facilitator Superfamily ISU54_RS07030 PF04134 Protein of unknown function, DUF393 ISU54_RS07040 PF01557 Fumarylacetoacetate (FAA) hydrolase family ISU54_RS07045 PF13378 Enolase C-terminal domain-like ISU54_RS07045 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ISU54_RS07050 PF01070 FMN-dependent dehydrogenase ISU54_RS07055 PF00764 Arginosuccinate synthase ISU54_RS07060 PF01554 MatE ISU54_RS07070 PF01522 Polysaccharide deacetylase ISU54_RS07080 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) ISU54_RS07090 PF00072 Response regulator receiver domain ISU54_RS07090 PF00196 Bacterial regulatory proteins, luxR family ISU54_RS07095 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ISU54_RS07105 PF03480 Bacterial extracellular solute-binding protein, family 7 ISU54_RS07110 PF01648 4'-phosphopantetheinyl transferase superfamily ISU54_RS07110 PF17837 4'-phosphopantetheinyl transferase N-terminal domain ISU54_RS07120 PF16874 Glycosyl hydrolase family 36 C-terminal domain ISU54_RS07120 PF16875 Glycosyl hydrolase family 36 N-terminal domain ISU54_RS07125 PF01306 LacY proton/sugar symporter ISU54_RS07130 PF00872 Transposase, Mutator family ISU54_RS07140 PF02796 Helix-turn-helix domain of resolvase ISU54_RS07140 PF00665 Integrase core domain ISU54_RS07145 PF01695 IstB-like ATP binding protein ISU54_RS07150 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU54_RS07150 PF00356 Bacterial regulatory proteins, lacI family ISU54_RS07160 PF06167 Glucose-regulated metallo-peptidase M90 ISU54_RS07175 PF00005 ABC transporter ISU54_RS07175 PF00664 ABC transporter transmembrane region ISU54_RS07185 PF12833 Helix-turn-helix domain ISU54_RS07190 PF10964 Protein of unknown function (DUF2766) ISU54_RS07195 PF13996 YobH-like protein ISU54_RS07200 PF13998 MgrB protein ISU54_RS07205 PF13974 YebO-like protein ISU54_RS07220 PF00324 Amino acid permease ISU54_RS07225 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP ISU54_RS07230 PF10736 Protein of unknown function (DUF2627) ISU54_RS07235 PF00313 'Cold-shock' DNA-binding domain ISU54_RS07240 PF02578 Multi-copper polyphenol oxidoreductase laccase ISU54_RS07245 PF13847 Methyltransferase domain ISU54_RS07260 PF07715 TonB-dependent Receptor Plug Domain ISU54_RS07260 PF00593 TonB dependent receptor ISU54_RS07265 PF02659 Putative manganese efflux pump ISU54_RS07270 PF06173 Protein of unknown function (DUF986) ISU54_RS07275 PF03613 PTS system mannose/fructose/sorbose family IID component ISU54_RS07280 PF03609 PTS system sorbose-specific iic component ISU54_RS07285 PF03610 PTS system fructose IIA component ISU54_RS07285 PF03830 PTS system sorbose subfamily IIB component ISU54_RS07290 PF03741 Integral membrane protein TerC family ISU54_RS07290 PF03471 Transporter associated domain ISU54_RS07295 PF01047 MarR family ISU54_RS07300 PF01557 Fumarylacetoacetate (FAA) hydrolase family ISU54_RS07305 PF01557 Fumarylacetoacetate (FAA) hydrolase family ISU54_RS07310 PF00171 Aldehyde dehydrogenase family ISU54_RS07315 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ISU54_RS07320 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase ISU54_RS07325 PF01557 Fumarylacetoacetate (FAA) hydrolase family ISU54_RS07330 PF03328 HpcH/HpaI aldolase/citrate lyase family ISU54_RS07335 PF07690 Major Facilitator Superfamily ISU54_RS07340 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal ISU54_RS07340 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal ISU54_RS07345 PF01613 Flavin reductase like domain ISU54_RS07350 PF03315 Serine dehydratase beta chain ISU54_RS07350 PF03313 Serine dehydratase alpha chain ISU54_RS07355 PF00293 NUDIX domain ISU54_RS07360 PF04715 Anthranilate synthase component I, N terminal region ISU54_RS07360 PF00425 chorismate binding enzyme ISU54_RS07365 PF03701 Uncharacterised protein family (UPF0181) ISU54_RS07370 PF02222 ATP-grasp domain ISU54_RS07375 PF03880 DbpA RNA binding domain ISU54_RS07375 PF00271 Helicase conserved C-terminal domain ISU54_RS07375 PF00270 DEAD/DEAH box helicase ISU54_RS07380 PF07130 YebG protein ISU54_RS07385 PF04266 ASCH domain ISU54_RS07390 PF13995 YebF-like protein ISU54_RS07395 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ISU54_RS07395 PF00326 Prolyl oligopeptidase family ISU54_RS07400 PF00561 alpha/beta hydrolase fold ISU54_RS07405 PF06440 DNA polymerase III, theta subunit ISU54_RS07410 PF00210 Ferritin-like domain ISU54_RS07415 PF04234 CopC domain ISU54_RS07425 PF10709 Protein of unknown function (DUF2511) ISU54_RS07440 PF01312 FlhB HrpN YscU SpaS Family ISU54_RS07445 PF00771 FHIPEP family ISU54_RS07450 PF06366 Flagellar protein FlhE ISU54_RS07460 PF01797 Transposase IS200 like ISU54_RS07470 PF05130 FlgN protein ISU54_RS07475 PF04316 Anti-sigma-28 factor, FlgM ISU54_RS07480 PF17656 FlgA N-terminal domain ISU54_RS07480 PF13144 Chaperone for flagella basal body P-ring formation ISU54_RS07485 PF00460 Flagella basal body rod protein ISU54_RS07490 PF00460 Flagella basal body rod protein ISU54_RS07490 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU54_RS07495 PF13861 FlgD Tudor-like domain ISU54_RS07495 PF03963 Flagellar hook capping protein - N-terminal region ISU54_RS07495 PF13860 FlgD Ig-like domain ISU54_RS07500 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU54_RS07500 PF00460 Flagella basal body rod protein ISU54_RS07500 PF07559 Flagellar basal body protein FlaE ISU54_RS07515 PF02107 Flagellar L-ring protein ISU54_RS07520 PF02119 Flagellar P-ring protein ISU54_RS07525 PF10135 Rod binding protein ISU54_RS07525 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ISU54_RS07530 PF00460 Flagella basal body rod protein ISU54_RS07530 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ISU54_RS07535 PF00669 Bacterial flagellin N-terminal helical region ISU54_RS07540 PF04198 Putative sugar-binding domain ISU54_RS07545 PF00596 Class II Aldolase and Adducin N-terminal domain ISU54_RS07550 PF02653 Branched-chain amino acid transport system / permease component ISU54_RS07555 PF13407 Periplasmic binding protein domain ISU54_RS07560 PF00005 ABC transporter ISU54_RS07565 PF02653 Branched-chain amino acid transport system / permease component ISU54_RS07570 PF00294 pfkB family carbohydrate kinase ISU54_RS07585 PF01311 Bacterial export proteins, family 1 ISU54_RS07590 PF01313 Bacterial export proteins, family 3 ISU54_RS07595 PF00813 FliP family ISU54_RS07600 PF04347 Flagellar biosynthesis protein, FliO ISU54_RS07605 PF16973 Flagellar motor switch protein FliN N-terminal ISU54_RS07605 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ISU54_RS07610 PF02154 Flagellar motor switch protein FliM ISU54_RS07610 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ISU54_RS07615 PF03748 Flagellar basal body-associated protein FliL ISU54_RS07620 PF02120 Flagellar hook-length control protein FliK ISU54_RS07625 PF02050 Flagellar FliJ protein ISU54_RS07630 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU54_RS07630 PF18269 T3SS EscN ATPase C-terminal domain ISU54_RS07635 PF02108 Flagellar assembly protein FliH ISU54_RS07640 PF01706 FliG C-terminal domain ISU54_RS07640 PF14842 FliG N-terminal domain ISU54_RS07640 PF14841 FliG middle domain ISU54_RS07645 PF08345 Flagellar M-ring protein C-terminal ISU54_RS07645 PF01514 Secretory protein of YscJ/FliF family ISU54_RS07650 PF02049 Flagellar hook-basal body complex protein FliE ISU54_RS07670 PF00730 HhH-GPD superfamily base excision DNA repair protein ISU54_RS07675 PF01966 HD domain ISU54_RS07680 PF02743 Cache domain ISU54_RS07680 PF00672 HAMP domain ISU54_RS07680 PF00211 Adenylate and Guanylate cyclase catalytic domain ISU54_RS07685 PF12833 Helix-turn-helix domain ISU54_RS07690 PF05400 Flagellar protein FliT ISU54_RS07695 PF02561 Flagellar protein FliS ISU54_RS07700 PF07196 Flagellin hook IN motif ISU54_RS07700 PF07195 Flagellar hook-associated protein 2 C-terminus ISU54_RS07700 PF02465 Flagellar hook-associated protein 2 N-terminus ISU54_RS07705 PF00700 Bacterial flagellin C-terminal helical region ISU54_RS07705 PF08884 Flagellin D3 domain ISU54_RS07705 PF00669 Bacterial flagellin N-terminal helical region ISU54_RS07710 PF04542 Sigma-70 region 2 ISU54_RS07710 PF04539 Sigma-70 region 3 ISU54_RS07710 PF04545 Sigma-70, region 4 ISU54_RS07715 PF02899 Phage integrase, N-terminal SAM-like domain ISU54_RS07720 PF00291 Pyridoxal-phosphate dependent enzyme ISU54_RS07725 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU54_RS07730 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS07735 PF00005 ABC transporter ISU54_RS07750 PF00171 Aldehyde dehydrogenase family ISU54_RS07750 PF01619 Proline dehydrogenase ISU54_RS07750 PF14850 DNA-binding domain of Proline dehydrogenase ISU54_RS07750 PF18327 Proline utilization A proline dehydrogenase N-terminal domain ISU54_RS07760 PF00474 Sodium:solute symporter family ISU54_RS07765 PF03239 Iron permease FTR1 family ISU54_RS07770 PF09375 Imelysin ISU54_RS07770 PF13473 Cupredoxin-like domain ISU54_RS07775 PF04261 Dyp-type peroxidase family ISU54_RS07780 PF03358 NADPH-dependent FMN reductase ISU54_RS07785 PF01344 Kelch motif ISU54_RS07790 PF00324 Amino acid permease ISU54_RS07800 PF13505 Outer membrane protein beta-barrel domain ISU54_RS07810 PF06942 GlpM protein ISU54_RS07815 PF10769 Protein of unknown function (DUF2594) ISU54_RS07820 PF00072 Response regulator receiver domain ISU54_RS07820 PF00196 Bacterial regulatory proteins, luxR family ISU54_RS07825 PF08459 UvrC Helix-hairpin-helix N-terminal ISU54_RS07825 PF02151 UvrB/uvrC motif ISU54_RS07825 PF01541 GIY-YIG catalytic domain ISU54_RS07830 PF01066 CDP-alcohol phosphatidyltransferase ISU54_RS07870 PF05638 Type VI secretion system effector, Hcp ISU54_RS07940 PF07702 UTRA domain ISU54_RS07940 PF00392 Bacterial regulatory proteins, gntR family ISU54_RS07945 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ISU54_RS07945 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ISU54_RS07955 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS07960 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS07965 PF08402 TOBE domain ISU54_RS07965 PF00005 ABC transporter ISU54_RS07985 PF02796 Helix-turn-helix domain of resolvase ISU54_RS07985 PF00665 Integrase core domain ISU54_RS07990 PF01695 IstB-like ATP binding protein ISU54_RS08025 PF07715 TonB-dependent Receptor Plug Domain ISU54_RS08025 PF00593 TonB dependent receptor ISU54_RS08030 PF00501 AMP-binding enzyme ISU54_RS08030 PF13193 AMP-binding enzyme C-terminal domain ISU54_RS08035 PF00975 Thioesterase domain ISU54_RS08045 PF02801 Beta-ketoacyl synthase, C-terminal domain ISU54_RS08045 PF00550 Phosphopantetheine attachment site ISU54_RS08045 PF16197 Ketoacyl-synthetase C-terminal extension ISU54_RS08045 PF00698 Acyl transferase domain ISU54_RS08045 PF00668 Condensation domain ISU54_RS08045 PF00109 Beta-ketoacyl synthase, N-terminal domain ISU54_RS08050 PF08242 Methyltransferase domain ISU54_RS08050 PF00668 Condensation domain ISU54_RS08050 PF00501 AMP-binding enzyme ISU54_RS08050 PF00550 Phosphopantetheine attachment site ISU54_RS08060 PF08021 Siderophore-interacting FAD-binding domain ISU54_RS08060 PF04954 Siderophore-interacting protein ISU54_RS08060 PF00005 ABC transporter ISU54_RS08060 PF00664 ABC transporter transmembrane region ISU54_RS08065 PF00005 ABC transporter ISU54_RS08065 PF00664 ABC transporter transmembrane region ISU54_RS08070 PF07690 Major Facilitator Superfamily ISU54_RS08075 PF00425 chorismate binding enzyme ISU54_RS08080 PF13356 Arm DNA-binding domain ISU54_RS08080 PF00589 Phage integrase family ISU54_RS08090 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU54_RS08090 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU54_RS08100 PF13954 PapC N-terminal domain ISU54_RS08100 PF00577 Outer membrane usher protein ISU54_RS08100 PF13953 PapC C-terminal domain ISU54_RS08105 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU54_RS08105 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU54_RS08115 PF00072 Response regulator receiver domain ISU54_RS08115 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU54_RS08115 PF00989 PAS fold ISU54_RS08115 PF01627 Hpt domain ISU54_RS08115 PF00512 His Kinase A (phospho-acceptor) domain ISU54_RS08115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU54_RS08120 PF00072 Response regulator receiver domain ISU54_RS08120 PF00196 Bacterial regulatory proteins, luxR family ISU54_RS08125 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain ISU54_RS08125 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain ISU54_RS08130 PF01575 MaoC like domain ISU54_RS08135 PF03328 HpcH/HpaI aldolase/citrate lyase family ISU54_RS08140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU54_RS08140 PF03466 LysR substrate binding domain ISU54_RS08155 PF07690 Major Facilitator Superfamily ISU54_RS08160 PF04909 Amidohydrolase ISU54_RS08170 PF02508 Rnf-Nqr subunit, membrane protein ISU54_RS08175 PF00155 Aminotransferase class I and II ISU54_RS08180 PF00324 Amino acid permease ISU54_RS08185 PF08220 DeoR-like helix-turn-helix domain ISU54_RS08185 PF00455 DeoR C terminal sensor domain ISU54_RS08195 PF04960 Glutaminase ISU54_RS08210 PF03239 Iron permease FTR1 family ISU54_RS08215 PF10634 Fe2+ transport protein ISU54_RS08225 PF00005 ABC transporter ISU54_RS08225 PF12704 MacB-like periplasmic core domain ISU54_RS08225 PF02687 FtsX-like permease family ISU54_RS08235 PF02687 FtsX-like permease family ISU54_RS08235 PF00005 ABC transporter ISU54_RS08235 PF12704 MacB-like periplasmic core domain ISU54_RS08240 PF00578 AhpC/TSA family ISU54_RS08250 PF03848 Tellurite resistance protein TehB ISU54_RS08250 PF09313 Domain of unknown function (DUF1971) ISU54_RS08255 PF00557 Metallopeptidase family M24 ISU54_RS08265 PF14883 Hypothetical glycosyl hydrolase family 13 ISU54_RS08265 PF01522 Polysaccharide deacetylase ISU54_RS08270 PF00535 Glycosyl transferase family 2 ISU54_RS08275 PF13994 PgaD-like protein ISU54_RS08290 PF02562 PhoH-like protein ISU54_RS08295 PF01699 Sodium/calcium exchanger protein ISU54_RS08300 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ISU54_RS08300 PF07730 Histidine kinase ISU54_RS08300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU54_RS08300 PF00672 HAMP domain ISU54_RS08310 PF00155 Aminotransferase class I and II ISU54_RS08310 PF00392 Bacterial regulatory proteins, gntR family ISU54_RS08315 PF00202 Aminotransferase class-III ISU54_RS08325 PF00171 Aldehyde dehydrogenase family ISU54_RS08330 PF04996 Succinylarginine dihydrolase ISU54_RS08335 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family ISU54_RS08345 PF02796 Helix-turn-helix domain of resolvase ISU54_RS08345 PF00665 Integrase core domain ISU54_RS08350 PF01695 IstB-like ATP binding protein ISU54_RS08365 PF01979 Amidohydrolase family ISU54_RS08370 PF00392 Bacterial regulatory proteins, gntR family ISU54_RS08370 PF07702 UTRA domain ISU54_RS08375 PF01979 Amidohydrolase family ISU54_RS08380 PF05962 HutD ISU54_RS08390 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ISU54_RS08390 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ISU54_RS08395 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ISU54_RS08395 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ISU54_RS08400 PF01370 NAD dependent epimerase/dehydratase family ISU54_RS08445 PF00872 Transposase, Mutator family ISU54_RS08465 PF08242 Methyltransferase domain ISU54_RS08510 PF00672 HAMP domain ISU54_RS08510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU54_RS08510 PF00512 His Kinase A (phospho-acceptor) domain ISU54_RS08515 PF00486 Transcriptional regulatory protein, C terminal ISU54_RS08515 PF00072 Response regulator receiver domain ISU54_RS08520 PF02129 X-Pro dipeptidyl-peptidase (S15 family) ISU54_RS08560 PF01926 50S ribosome-binding GTPase ISU54_RS08560 PF06071 Protein of unknown function (DUF933) ISU54_RS08565 PF01195 Peptidyl-tRNA hydrolase ISU54_RS08570 PF10762 Protein of unknown function (DUF2583) ISU54_RS08575 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ISU54_RS08575 PF14572 Phosphoribosyl synthetase-associated domain ISU54_RS08580 PF00288 GHMP kinases N terminal domain ISU54_RS08580 PF08544 GHMP kinases C terminal ISU54_RS08585 PF03550 Outer membrane lipoprotein LolB ISU54_RS08590 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ISU54_RS08590 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ISU54_RS08590 PF01488 Shikimate / quinate 5-dehydrogenase ISU54_RS08595 PF03462 PCRF domain ISU54_RS08595 PF00472 RF-1 domain ISU54_RS08600 PF17827 PrmC N-terminal domain ISU54_RS08600 PF13847 Methyltransferase domain ISU54_RS08605 PF04247 Invasion gene expression up-regulator, SirB ISU54_RS08610 PF13369 Transglutaminase-like superfamily ISU54_RS08615 PF00793 DAHP synthetase I family ISU54_RS08620 PF00916 Sulfate permease family ISU54_RS08620 PF01740 STAS domain ISU54_RS08630 PF03009 Glycerophosphoryl diester phosphodiesterase family ISU54_RS08640 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS08645 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS08650 PF00005 ABC transporter ISU54_RS08650 PF08402 TOBE domain ISU54_RS08655 PF01797 Transposase IS200 like ISU54_RS08665 PF03009 Glycerophosphoryl diester phosphodiesterase family ISU54_RS08670 PF00480 ROK family ISU54_RS08670 PF01325 Iron dependent repressor, N-terminal DNA binding domain ISU54_RS08680 PF02811 PHP domain ISU54_RS08685 PF02613 Nitrate reductase delta subunit ISU54_RS08690 PF07273 Protein of unknown function (DUF1439) ISU54_RS08695 PF07690 Major Facilitator Superfamily ISU54_RS08700 PF13302 Acetyltransferase (GNAT) domain ISU54_RS08705 PF04337 Protein of unknown function, DUF480 ISU54_RS08710 PF03023 Lipid II flippase MurJ ISU54_RS08715 PF08479 POTRA domain, ShlB-type ISU54_RS08715 PF17287 POTRA domain ISU54_RS08715 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ISU54_RS08720 PF13332 Hemagglutinin repeat ISU54_RS08720 PF05860 haemagglutination activity domain ISU54_RS08725 PF05746 DALR anticodon binding domain ISU54_RS08725 PF00750 tRNA synthetases class I (R) ISU54_RS08725 PF03485 Arginyl tRNA synthetase N terminal domain ISU54_RS08730 PF06185 YecM protein ISU54_RS08735 PF03932 CutC family ISU54_RS08740 PF08003 Protein of unknown function (DUF1698) ISU54_RS08745 PF13649 Methyltransferase domain ISU54_RS08750 PF01124 MAPEG family ISU54_RS08755 PF01904 Protein of unknown function DUF72 ISU54_RS08760 PF01336 OB-fold nucleic acid binding domain ISU54_RS08760 PF00152 tRNA synthetases class II (D, K and N) ISU54_RS08760 PF02938 GAD domain ISU54_RS08765 PF00293 NUDIX domain ISU54_RS08770 PF01709 Transcriptional regulator ISU54_RS08775 PF02075 Crossover junction endodeoxyribonuclease RuvC ISU54_RS08780 PF07499 RuvA, C-terminal domain ISU54_RS08780 PF01330 RuvA N terminal domain ISU54_RS08785 PF05496 Holliday junction DNA helicase RuvB P-loop domain ISU54_RS08785 PF05491 RuvB C-terminal winged helix domain ISU54_RS08785 PF17864 RuvB AAA lid domain ISU54_RS08790 PF00950 ABC 3 transport family ISU54_RS08795 PF00005 ABC transporter ISU54_RS08800 PF01297 Zinc-uptake complex component A periplasmic ISU54_RS08805 PF01551 Peptidase family M23 ISU54_RS08805 PF01476 LysM domain ISU54_RS08805 PF08525 Opacity-associated protein A N-terminal motif ISU54_RS08810 PF03279 Bacterial lipid A biosynthesis acyltransferase ISU54_RS08820 PF00224 Pyruvate kinase, barrel domain ISU54_RS08820 PF02887 Pyruvate kinase, alpha/beta domain ISU54_RS08825 PF01380 SIS domain ISU54_RS08825 PF01418 Helix-turn-helix domain, rpiR family ISU54_RS08830 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ISU54_RS08830 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ISU54_RS08835 PF01081 KDPG and KHG aldolase ISU54_RS08840 PF00893 Small Multidrug Resistance protein ISU54_RS08845 PF00893 Small Multidrug Resistance protein ISU54_RS08850 PF01042 Endoribonuclease L-PSP ISU54_RS08855 PF04851 Type III restriction enzyme, res subunit ISU54_RS08855 PF13307 Helicase C-terminal domain ISU54_RS08860 PF00814 Glycoprotease family ISU54_RS08865 PF03843 Outer membrane lipoprotein Slp family ISU54_RS08875 PF00501 AMP-binding enzyme ISU54_RS08875 PF13193 AMP-binding enzyme C-terminal domain ISU54_RS08880 PF00570 HRDC domain ISU54_RS08880 PF01612 3'-5' exonuclease ISU54_RS08885 PF03776 Septum formation topological specificity factor MinE ISU54_RS08890 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ISU54_RS08895 PF05209 Septum formation inhibitor MinC, N-terminal domain ISU54_RS08895 PF03775 Septum formation inhibitor MinC, C-terminal domain ISU54_RS08900 PF05166 YcgL domain ISU54_RS08905 PF13406 Transglycosylase SLT domain ISU54_RS08910 PF01557 Fumarylacetoacetate (FAA) hydrolase family ISU54_RS08915 PF03692 Putative zinc- or iron-chelating domain ISU54_RS08920 PF00589 Phage integrase family ISU54_RS08920 PF12167 Arm DNA-binding domain ISU54_RS08925 PF02796 Helix-turn-helix domain of resolvase ISU54_RS08925 PF00665 Integrase core domain ISU54_RS08930 PF01695 IstB-like ATP binding protein ISU54_RS08945 PF05772 NinB protein ISU54_RS08955 PF06530 Phage antitermination protein Q ISU54_RS09020 PF00872 Transposase, Mutator family ISU54_RS09175 PF02413 Caudovirales tail fibre assembly protein, lambda gpK ISU54_RS09180 PF00872 Transposase, Mutator family ISU54_RS09190 PF00266 Aminotransferase class-V ISU54_RS09205 PF02600 Disulfide bond formation protein DsbB ISU54_RS09215 PF07840 FadR C-terminal domain ISU54_RS09215 PF00392 Bacterial regulatory proteins, gntR family ISU54_RS09220 PF04293 SpoVR like protein ISU54_RS09225 PF01266 FAD dependent oxidoreductase ISU54_RS09230 PF07690 Major Facilitator Superfamily ISU54_RS09235 PF02678 Pirin ISU54_RS09235 PF05726 Pirin C-terminal cupin domain ISU54_RS09240 PF03466 LysR substrate binding domain ISU54_RS09240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU54_RS09250 PF04285 Protein of unknown function (DUF444) ISU54_RS09255 PF08298 PrkA AAA domain ISU54_RS09255 PF06798 PrkA serine protein kinase C-terminal domain ISU54_RS09260 PF06629 MltA-interacting protein MipA ISU54_RS09265 PF01263 Aldose 1-epimerase ISU54_RS09270 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ISU54_RS09270 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ISU54_RS09275 PF01641 SelR domain ISU54_RS09280 PF07023 Protein of unknown function (DUF1315) ISU54_RS09285 PF00857 Isochorismatase family ISU54_RS09290 PF17763 Glutaminase/Asparaginase C-terminal domain ISU54_RS09290 PF00710 Asparaginase, N-terminal ISU54_RS09295 PF01343 Peptidase family S49 ISU54_RS09300 PF00881 Nitroreductase family ISU54_RS09305 PF02769 AIR synthase related protein, C-terminal domain ISU54_RS09305 PF00586 AIR synthase related protein, N-terminal domain ISU54_RS09310 PF01751 Toprim domain ISU54_RS09310 PF01131 DNA topoisomerase ISU54_RS09315 PF07383 Protein of unknown function (DUF1496) ISU54_RS09320 PF00293 NUDIX domain ISU54_RS09325 PF03372 Endonuclease/Exonuclease/phosphatase family ISU54_RS09330 PF03466 LysR substrate binding domain ISU54_RS09330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU54_RS09350 PF00872 Transposase, Mutator family ISU54_RS09355 PF00551 Formyl transferase ISU54_RS09355 PF01842 ACT domain ISU54_RS09360 PF02810 SEC-C motif ISU54_RS09365 PF00072 Response regulator receiver domain ISU54_RS09370 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ISU54_RS09370 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ISU54_RS09370 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ISU54_RS09375 PF00816 H-NS histone family ISU54_RS09380 PF00265 Thymidine kinase ISU54_RS09385 PF01695 IstB-like ATP binding protein ISU54_RS09390 PF02796 Helix-turn-helix domain of resolvase ISU54_RS09390 PF00665 Integrase core domain ISU54_RS09395 PF01797 Transposase IS200 like ISU54_RS09400 PF02074 Carboxypeptidase Taq (M32) metallopeptidase ISU54_RS09405 PF00512 His Kinase A (phospho-acceptor) domain ISU54_RS09405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU54_RS09405 PF00672 HAMP domain ISU54_RS09410 PF00072 Response regulator receiver domain ISU54_RS09410 PF00486 Transcriptional regulatory protein, C terminal ISU54_RS09420 PF13520 Amino acid permease ISU54_RS09425 PF07338 Protein of unknown function (DUF1471) ISU54_RS09430 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ISU54_RS09430 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ISU54_RS09430 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ISU54_RS09435 PF02233 NAD(P) transhydrogenase beta subunit ISU54_RS09440 PF00582 Universal stress protein family ISU54_RS09445 PF13545 Crp-like helix-turn-helix domain ISU54_RS09445 PF00027 Cyclic nucleotide-binding domain ISU54_RS09450 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ISU54_RS09450 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ISU54_RS09455 PF00245 Alkaline phosphatase ISU54_RS09465 PF13419 Haloacid dehalogenase-like hydrolase ISU54_RS09470 PF01842 ACT domain ISU54_RS09475 PF00205 Thiamine pyrophosphate enzyme, central domain ISU54_RS09475 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU54_RS09475 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU54_RS09505 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus ISU54_RS09505 PF01048 Phosphorylase superfamily ISU54_RS09510 PF00005 ABC transporter ISU54_RS09515 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS09520 PF09084 NMT1/THI5 like ISU54_RS09535 PF00356 Bacterial regulatory proteins, lacI family ISU54_RS09540 PF00654 Voltage gated chloride channel ISU54_RS09550 PF00480 ROK family ISU54_RS09555 PF03466 LysR substrate binding domain ISU54_RS09555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU54_RS09560 PF07690 Major Facilitator Superfamily ISU54_RS09565 PF05472 DNA replication terminus site-binding protein (Ter protein) ISU54_RS09570 PF00206 Lyase ISU54_RS09570 PF10415 Fumarase C C-terminus ISU54_RS09575 PF01238 Phosphomannose isomerase type I ISU54_RS09580 PF06097 Bacterial protein of unknown function (DUF945) ISU54_RS09590 PF13593 SBF-like CPA transporter family (DUF4137) ISU54_RS09595 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ISU54_RS09595 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ISU54_RS09600 PF12833 Helix-turn-helix domain ISU54_RS09600 PF02311 AraC-like ligand binding domain ISU54_RS09605 PF02653 Branched-chain amino acid transport system / permease component ISU54_RS09610 PF00005 ABC transporter ISU54_RS09615 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU54_RS09620 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU54_RS09625 PF11762 L-arabinose isomerase C-terminal domain ISU54_RS09625 PF02610 L-arabinose isomerase ISU54_RS09630 PF03412 Peptidase C39 family ISU54_RS09630 PF00005 ABC transporter ISU54_RS09630 PF00664 ABC transporter transmembrane region ISU54_RS09640 PF13533 Biotin-lipoyl like ISU54_RS09645 PF00664 ABC transporter transmembrane region ISU54_RS09645 PF03412 Peptidase C39 family ISU54_RS09645 PF00005 ABC transporter ISU54_RS09650 PF00005 ABC transporter ISU54_RS09650 PF03412 Peptidase C39 family ISU54_RS09650 PF00664 ABC transporter transmembrane region ISU54_RS09655 PF10754 Protein of unknown function (DUF2569) ISU54_RS09660 PF02508 Rnf-Nqr subunit, membrane protein ISU54_RS09665 PF04060 Putative Fe-S cluster ISU54_RS09670 PF10531 SLBB domain ISU54_RS09670 PF13237 4Fe-4S dicluster domain ISU54_RS09670 PF13375 RnfC Barrel sandwich hybrid domain ISU54_RS09670 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ISU54_RS09675 PF12833 Helix-turn-helix domain ISU54_RS09675 PF06445 GyrI-like small molecule binding domain ISU54_RS09680 PF03116 NQR2, RnfD, RnfE family ISU54_RS09685 PF04205 FMN-binding domain ISU54_RS09690 PF02508 Rnf-Nqr subunit, membrane protein ISU54_RS09695 PF10576 Iron-sulfur binding domain of endonuclease III ISU54_RS09695 PF00633 Helix-hairpin-helix motif ISU54_RS09695 PF00730 HhH-GPD superfamily base excision DNA repair protein ISU54_RS09700 PF01370 NAD dependent epimerase/dehydratase family ISU54_RS09705 PF07690 Major Facilitator Superfamily ISU54_RS09710 PF00773 RNB domain ISU54_RS09710 PF17876 Cold shock domain ISU54_RS09710 PF08206 Ribonuclease B OB domain ISU54_RS09710 PF00575 S1 RNA binding domain ISU54_RS09715 PF13722 5TM C-terminal transporter carbon starvation CstA ISU54_RS09715 PF02554 Carbon starvation protein CstA ISU54_RS09720 PF04328 Selenoprotein, putative ISU54_RS09725 PF00923 Transaldolase/Fructose-6-phosphate aldolase ISU54_RS09735 PF00596 Class II Aldolase and Adducin N-terminal domain ISU54_RS09740 PF05433 Glycine zipper 2TM domain ISU54_RS09745 PF01253 Translation initiation factor SUI1 ISU54_RS09750 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ISU54_RS09760 PF18073 Rubredoxin metal binding domain ISU54_RS09765 PF06305 Lipopolysaccharide assembly protein A domain ISU54_RS09770 PF01569 PAP2 superfamily ISU54_RS09775 PF00925 GTP cyclohydrolase II ISU54_RS09780 PF00694 Aconitase C-terminal domain ISU54_RS09780 PF00330 Aconitase family (aconitate hydratase) ISU54_RS09790 PF03466 LysR substrate binding domain ISU54_RS09790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU54_RS09795 PF08272 Topoisomerase I zinc-ribbon-like ISU54_RS09795 PF01396 Topoisomerase DNA binding C4 zinc finger ISU54_RS09795 PF01751 Toprim domain ISU54_RS09795 PF01131 DNA topoisomerase ISU54_RS09805 PF10692 Protein of unknown function (DUF2498) ISU54_RS09810 PF08496 Peptidase family S49 N-terminal ISU54_RS09810 PF01343 Peptidase family S49 ISU54_RS09815 PF00106 short chain dehydrogenase ISU54_RS09820 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP ISU54_RS09825 PF00849 RNA pseudouridylate synthase ISU54_RS09825 PF01479 S4 domain ISU54_RS09830 PF01300 Telomere recombination ISU54_RS09835 PF02811 PHP domain ISU54_RS09845 PF04715 Anthranilate synthase component I, N terminal region ISU54_RS09845 PF00425 chorismate binding enzyme ISU54_RS09850 PF00117 Glutamine amidotransferase class-I ISU54_RS09855 PF02885 Glycosyl transferase family, helical bundle domain ISU54_RS09855 PF00591 Glycosyl transferase family, a/b domain ISU54_RS09860 PF00218 Indole-3-glycerol phosphate synthase ISU54_RS09860 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ISU54_RS09865 PF00291 Pyridoxal-phosphate dependent enzyme ISU54_RS09870 PF00290 Tryptophan synthase alpha chain ISU54_RS09880 PF03922 OmpW family ISU54_RS09905 PF04279 Intracellular septation protein A ISU54_RS09910 PF03061 Thioesterase superfamily ISU54_RS09915 PF00872 Transposase, Mutator family ISU54_RS09920 PF03544 Gram-negative bacterial TonB protein C-terminal ISU54_RS09925 PF03795 YCII-related domain ISU54_RS09940 PF13505 Outer membrane protein beta-barrel domain ISU54_RS09955 PF13091 PLD-like domain ISU54_RS09955 PF13396 Phospholipase_D-nuclease N-terminal ISU54_RS09960 PF04269 Protein of unknown function, DUF440 ISU54_RS09970 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU54_RS09970 PF00005 ABC transporter ISU54_RS09975 PF00005 ABC transporter ISU54_RS09975 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU54_RS09980 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU54_RS09980 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS09985 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS09990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU54_RS09995 PF01914 MarC family integral membrane protein ISU54_RS10000 PF00171 Aldehyde dehydrogenase family ISU54_RS10000 PF00465 Iron-containing alcohol dehydrogenase ISU54_RS10005 PF00665 Integrase core domain ISU54_RS10005 PF02796 Helix-turn-helix domain of resolvase ISU54_RS10010 PF01695 IstB-like ATP binding protein ISU54_RS10040 PF00089 Trypsin ISU54_RS10055 PF04408 Helicase associated domain (HA2) ISU54_RS10055 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ISU54_RS10055 PF00271 Helicase conserved C-terminal domain ISU54_RS10055 PF11898 Domain of unknown function (DUF3418) ISU54_RS10055 PF00270 DEAD/DEAH box helicase ISU54_RS10060 PF02525 Flavodoxin-like fold ISU54_RS10065 PF00325 Bacterial regulatory proteins, crp family ISU54_RS10065 PF04198 Putative sugar-binding domain ISU54_RS10070 PF01232 Mannitol dehydrogenase Rossmann domain ISU54_RS10070 PF08125 Mannitol dehydrogenase C-terminal domain ISU54_RS10075 PF07027 Protein of unknown function (DUF1318) ISU54_RS10080 PF13617 YnbE-like lipoprotein ISU54_RS10085 PF11739 Dicarboxylate transport ISU54_RS10090 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU54_RS10090 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU54_RS10095 PF03724 META domain ISU54_RS10100 PF03891 Domain of unknown function (DUF333) ISU54_RS10105 PF02308 MgtC family ISU54_RS10110 PF00893 Small Multidrug Resistance protein ISU54_RS10115 PF10371 Domain of unknown function ISU54_RS10115 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase ISU54_RS10115 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II ISU54_RS10115 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg ISU54_RS10115 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU54_RS10120 PF01171 PP-loop family ISU54_RS10125 PF07859 alpha/beta hydrolase fold ISU54_RS10135 PF01544 CorA-like Mg2+ transporter protein ISU54_RS10140 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU54_RS10145 PF00246 Zinc carboxypeptidase ISU54_RS10150 PF13378 Enolase C-terminal domain-like ISU54_RS10150 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ISU54_RS10155 PF08534 Redoxin ISU54_RS10160 PF01797 Transposase IS200 like ISU54_RS10165 PF00158 Sigma-54 interaction domain ISU54_RS10165 PF18024 Helix-turn-helix domain ISU54_RS10170 PF09722 Protein of unknown function (DUF2384) ISU54_RS10175 PF08808 RES domain ISU54_RS10180 PF05128 Domain of unknown function (DUF697) ISU54_RS10185 PF04317 YcjX-like family, DUF463 ISU54_RS10195 PF04024 PspC domain ISU54_RS10200 PF06667 Phage shock protein B ISU54_RS10205 PF04012 PspA/IM30 family ISU54_RS10210 PF02954 Bacterial regulatory protein, Fis family ISU54_RS10210 PF00158 Sigma-54 interaction domain ISU54_RS10215 PF01797 Transposase IS200 like ISU54_RS10220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU54_RS10225 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS10230 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU54_RS10230 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS10235 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU54_RS10235 PF00005 ABC transporter ISU54_RS10240 PF00005 ABC transporter ISU54_RS10250 PF00854 POT family ISU54_RS10255 PF04893 Yip1 domain ISU54_RS10260 PF11656 YjbD family (DUF3811) ISU54_RS10265 PF02798 Glutathione S-transferase, N-terminal domain ISU54_RS10265 PF00043 Glutathione S-transferase, C-terminal domain ISU54_RS10270 PF08543 Phosphomethylpyrimidine kinase ISU54_RS10275 PF00579 tRNA synthetases class I (W and Y) ISU54_RS10275 PF01479 S4 domain ISU54_RS10280 PF01243 Pyridoxamine 5'-phosphate oxidase ISU54_RS10280 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ISU54_RS10285 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme ISU54_RS10290 PF03702 Anhydro-N-acetylmuramic acid kinase ISU54_RS10295 PF05433 Glycine zipper 2TM domain ISU54_RS10300 PF01047 MarR family ISU54_RS10305 PF08019 Phosphoethanolamine transferase EptA/EptB ISU54_RS10305 PF00884 Sulfatase ISU54_RS10310 PF00440 Bacterial regulatory proteins, tetR family ISU54_RS10310 PF16925 Tetracyclin repressor-like, C-terminal domain ISU54_RS10320 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ISU54_RS10325 PF00929 Exonuclease ISU54_RS10335 PF00462 Glutaredoxin ISU54_RS10340 PF00877 NlpC/P60 family ISU54_RS10345 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ISU54_RS10345 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ISU54_RS10355 PF00356 Bacterial regulatory proteins, lacI family ISU54_RS10360 PF03466 LysR substrate binding domain ISU54_RS10360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU54_RS10365 PF07690 Major Facilitator Superfamily ISU54_RS10375 PF00677 Lumazine binding domain ISU54_RS10385 PF01554 MatE ISU54_RS10400 PF00224 Pyruvate kinase, barrel domain ISU54_RS10400 PF02887 Pyruvate kinase, alpha/beta domain ISU54_RS10405 PF04728 Lipoprotein leucine-zipper ISU54_RS10410 PF01797 Transposase IS200 like ISU54_RS10415 PF02796 Helix-turn-helix domain of resolvase ISU54_RS10415 PF00665 Integrase core domain ISU54_RS10420 PF01695 IstB-like ATP binding protein ISU54_RS10430 PF17969 L,D-transpeptidase C-terminal domain ISU54_RS10430 PF03734 L,D-transpeptidase catalytic domain ISU54_RS10430 PF01476 LysM domain ISU54_RS10435 PF02657 Fe-S metabolism associated domain ISU54_RS10440 PF00266 Aminotransferase class-V ISU54_RS10445 PF01458 Uncharacterized protein family (UPF0051) ISU54_RS10450 PF00005 ABC transporter ISU54_RS10455 PF01458 Uncharacterized protein family (UPF0051) ISU54_RS10460 PF01521 Iron-sulphur cluster biosynthesis ISU54_RS10465 PF03061 Thioesterase superfamily ISU54_RS10470 PF02913 FAD linked oxidases, C-terminal domain ISU54_RS10470 PF01565 FAD binding domain ISU54_RS10470 PF13183 4Fe-4S dicluster domain ISU54_RS10475 PF01594 AI-2E family transporter ISU54_RS10485 PF02896 PEP-utilising enzyme, TIM barrel domain ISU54_RS10485 PF00391 PEP-utilising enzyme, mobile domain ISU54_RS10485 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ISU54_RS10490 PF03618 Kinase/pyrophosphorylase ISU54_RS10495 PF00793 DAHP synthetase I family ISU54_RS10505 PF03099 Biotin/lipoate A/B protein ligase family ISU54_RS10505 PF10437 Bacterial lipoate protein ligase C-terminus ISU54_RS10510 PF00877 NlpC/P60 family ISU54_RS10525 PF00892 EamA-like transporter family ISU54_RS10530 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase ISU54_RS10535 PF01522 Polysaccharide deacetylase ISU54_RS10540 PF01370 NAD dependent epimerase/dehydratase family ISU54_RS10540 PF02911 Formyl transferase, C-terminal domain ISU54_RS10540 PF00551 Formyl transferase ISU54_RS10545 PF00535 Glycosyl transferase family 2 ISU54_RS10550 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ISU54_RS10555 PF00005 ABC transporter ISU54_RS10560 PF00255 Glutathione peroxidase ISU54_RS10565 PF01032 FecCD transport family ISU54_RS10575 PF00216 Bacterial DNA-binding protein ISU54_RS10580 PF03484 tRNA synthetase B5 domain ISU54_RS10580 PF03147 Ferredoxin-fold anticodon binding domain ISU54_RS10580 PF01588 Putative tRNA binding domain ISU54_RS10580 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ISU54_RS10580 PF03483 B3/4 domain ISU54_RS10585 PF01409 tRNA synthetases class II core domain (F) ISU54_RS10585 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ISU54_RS10595 PF00453 Ribosomal protein L20 ISU54_RS10600 PF01632 Ribosomal protein L35 ISU54_RS10605 PF05198 Translation initiation factor IF-3, N-terminal domain ISU54_RS10605 PF00707 Translation initiation factor IF-3, C-terminal domain ISU54_RS10610 PF02824 TGS domain ISU54_RS10610 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ISU54_RS10610 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ISU54_RS10610 PF03129 Anticodon binding domain ISU54_RS10615 PF13619 KTSC domain ISU54_RS10625 PF01914 MarC family integral membrane protein ISU54_RS10630 PF01464 Transglycosylase SLT domain ISU54_RS10635 PF01297 Zinc-uptake complex component A periplasmic ISU54_RS10640 PF00005 ABC transporter ISU54_RS10645 PF00950 ABC 3 transport family ISU54_RS10650 PF00950 ABC 3 transport family ISU54_RS10660 PF03881 Fructosamine kinase ISU54_RS10665 PF14002 YniB-like protein ISU54_RS10670 PF13419 Haloacid dehalogenase-like hydrolase ISU54_RS10675 PF00872 Transposase, Mutator family ISU54_RS10680 PF07883 Cupin domain ISU54_RS10685 PF04962 KduI/IolB family ISU54_RS10695 PF06917 Periplasmic pectate lyase ISU54_RS10700 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS10705 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS10710 PF17912 MalK OB fold domain ISU54_RS10710 PF00005 ABC transporter ISU54_RS10710 PF03459 TOBE domain ISU54_RS10715 PF01547 Bacterial extracellular solute-binding protein ISU54_RS10720 PF06178 Oligogalacturonate-specific porin protein (KdgM) ISU54_RS10725 PF04307 LexA-binding, inner membrane-associated putative hydrolase ISU54_RS10730 PF00375 Sodium:dicarboxylate symporter family ISU54_RS10735 PF01510 N-acetylmuramoyl-L-alanine amidase ISU54_RS10740 PF01614 Bacterial transcriptional regulator ISU54_RS10740 PF09339 IclR helix-turn-helix domain ISU54_RS10745 PF14583 Oligogalacturonate lyase ISU54_RS10750 PF07690 Major Facilitator Superfamily ISU54_RS10755 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU54_RS10755 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU54_RS10765 PF00577 Outer membrane usher protein ISU54_RS10765 PF13954 PapC N-terminal domain ISU54_RS10765 PF13953 PapC C-terminal domain ISU54_RS10770 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU54_RS10770 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU54_RS10775 PF00419 Fimbrial protein ISU54_RS10780 PF01435 Peptidase family M48 ISU54_RS10785 PF11818 C-terminal domain of tail specific protease (DUF3340) ISU54_RS10785 PF17804 Tail specific protease N-terminal domain ISU54_RS10785 PF03572 Peptidase family S41 ISU54_RS10785 PF00595 PDZ domain ISU54_RS10790 PF17516 ProQ C-terminal domain ISU54_RS10790 PF04352 ProQ/FINO family ISU54_RS10795 PF13185 GAF domain ISU54_RS10800 PF04403 Paraquat-inducible protein A ISU54_RS10805 PF02470 MlaD protein ISU54_RS10825 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU54_RS10825 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU54_RS10840 PF07351 Protein of unknown function (DUF1480) ISU54_RS10850 PF00665 Integrase core domain ISU54_RS10850 PF02796 Helix-turn-helix domain of resolvase ISU54_RS10855 PF01695 IstB-like ATP binding protein ISU54_RS10880 PF01168 Alanine racemase, N-terminal domain ISU54_RS10880 PF00842 Alanine racemase, C-terminal domain ISU54_RS10890 PF13018 Extended Signal Peptide of Type V secretion system ISU54_RS10890 PF03895 YadA-like membrane anchor domain ISU54_RS10890 PF05662 Coiled stalk of trimeric autotransporter adhesin ISU54_RS10890 PF05658 Head domain of trimeric autotransporter adhesin ISU54_RS10895 PF05662 Coiled stalk of trimeric autotransporter adhesin ISU54_RS10895 PF13018 Extended Signal Peptide of Type V secretion system ISU54_RS10895 PF03895 YadA-like membrane anchor domain ISU54_RS10895 PF05658 Head domain of trimeric autotransporter adhesin ISU54_RS10900 PF01510 N-acetylmuramoyl-L-alanine amidase ISU54_RS10905 PF04344 Chemotaxis phosphatase, CheZ ISU54_RS10910 PF00072 Response regulator receiver domain ISU54_RS10915 PF01339 CheB methylesterase ISU54_RS10915 PF00072 Response regulator receiver domain ISU54_RS10920 PF01739 CheR methyltransferase, SAM binding domain ISU54_RS10920 PF03705 CheR methyltransferase, all-alpha domain ISU54_RS10925 PF02203 Tar ligand binding domain homologue ISU54_RS10925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU54_RS10925 PF00672 HAMP domain ISU54_RS10930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU54_RS10930 PF02203 Tar ligand binding domain homologue ISU54_RS10930 PF00672 HAMP domain ISU54_RS10945 PF12951 Passenger-associated-transport-repeat ISU54_RS10950 PF08348 YheO-like PAS domain ISU54_RS10950 PF13309 HTH domain ISU54_RS10960 PF01042 Endoribonuclease L-PSP ISU54_RS10965 PF07690 Major Facilitator Superfamily ISU54_RS10970 PF01584 CheW-like domain ISU54_RS10975 PF01584 CheW-like domain ISU54_RS10975 PF09078 CheY binding ISU54_RS10975 PF02895 Signal transducing histidine kinase, homodimeric domain ISU54_RS10975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU54_RS10975 PF01627 Hpt domain ISU54_RS10980 PF13677 Membrane MotB of proton-channel complex MotA/MotB ISU54_RS10980 PF00691 OmpA family ISU54_RS10985 PF01618 MotA/TolQ/ExbB proton channel family ISU54_RS10990 PF05280 Flagellar transcriptional activator (FlhC) ISU54_RS11000 PF00690 Cation transporter/ATPase, N-terminus ISU54_RS11000 PF00689 Cation transporting ATPase, C-terminus ISU54_RS11005 PF02308 MgtC family ISU54_RS11015 PF10781 Dextransucrase DSRB ISU54_RS11020 PF00313 'Cold-shock' DNA-binding domain ISU54_RS11025 PF00703 Glycosyl hydrolases family 2 ISU54_RS11025 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ISU54_RS11025 PF02837 Glycosyl hydrolases family 2, sugar binding domain ISU54_RS11025 PF02929 Beta galactosidase small chain ISU54_RS11025 PF16353 Domain of unknown function(DUF4981) ISU54_RS11030 PF14765 Polyketide synthase dehydratase ISU54_RS11030 PF08659 KR domain ISU54_RS11030 PF08240 Alcohol dehydrogenase GroES-like domain ISU54_RS11030 PF02801 Beta-ketoacyl synthase, C-terminal domain ISU54_RS11030 PF00550 Phosphopantetheine attachment site ISU54_RS11030 PF00698 Acyl transferase domain ISU54_RS11030 PF16197 Ketoacyl-synthetase C-terminal extension ISU54_RS11030 PF00107 Zinc-binding dehydrogenase ISU54_RS11030 PF00109 Beta-ketoacyl synthase, N-terminal domain ISU54_RS11035 PF10777 Inner membrane protein YlaC ISU54_RS11045 PF13404 AsnC-type helix-turn-helix domain ISU54_RS11045 PF01037 Lrp/AsnC ligand binding domain ISU54_RS11055 PF14001 YdfZ protein ISU54_RS11060 PF00328 Histidine phosphatase superfamily (branch 2) ISU54_RS11070 PF01638 HxlR-like helix-turn-helix ISU54_RS11075 PF05368 NmrA-like family ISU54_RS11080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU54_RS11080 PF08447 PAS fold ISU54_RS11090 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU54_RS11090 PF00356 Bacterial regulatory proteins, lacI family ISU54_RS11095 PF00180 Isocitrate/isopropylmalate dehydrogenase ISU54_RS11100 PF00849 RNA pseudouridylate synthase ISU54_RS11105 PF00293 NUDIX domain ISU54_RS11115 PF04356 Protein of unknown function (DUF489) ISU54_RS11120 PF08328 Adenylosuccinate lyase C-terminal ISU54_RS11120 PF00206 Lyase ISU54_RS11130 PF00486 Transcriptional regulatory protein, C terminal ISU54_RS11130 PF00072 Response regulator receiver domain ISU54_RS11135 PF08918 PhoQ Sensor ISU54_RS11135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU54_RS11140 PF08007 Cupin superfamily protein ISU54_RS11145 PF07687 Peptidase dimerisation domain ISU54_RS11145 PF01546 Peptidase family M20/M25/M40 ISU54_RS11150 PF02146 Sir2 family ISU54_RS11155 PF00480 ROK family ISU54_RS11160 PF00480 ROK family ISU54_RS11165 PF12704 MacB-like periplasmic core domain ISU54_RS11165 PF02687 FtsX-like permease family ISU54_RS11170 PF00005 ABC transporter ISU54_RS11175 PF12704 MacB-like periplasmic core domain ISU54_RS11175 PF02687 FtsX-like permease family ISU54_RS11180 PF00271 Helicase conserved C-terminal domain ISU54_RS11180 PF17757 UvrB interaction domain ISU54_RS11180 PF03461 TRCF domain ISU54_RS11180 PF02559 CarD-like/TRCF domain ISU54_RS11180 PF00270 DEAD/DEAH box helicase ISU54_RS11185 PF05433 Glycine zipper 2TM domain ISU54_RS11190 PF00872 Transposase, Mutator family ISU54_RS11205 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU54_RS11210 PF05728 Uncharacterised protein family (UPF0227) ISU54_RS11215 PF00933 Glycosyl hydrolase family 3 N terminal domain ISU54_RS11220 PF01636 Phosphotransferase enzyme family ISU54_RS11225 PF13036 Peptidoglycan-synthase activator LpoB ISU54_RS11225 PF08139 Prokaryotic membrane lipoprotein lipid attachment site ISU54_RS11230 PF07233 Protein of unknown function (DUF1425) ISU54_RS11235 PF01230 HIT domain ISU54_RS11240 PF08501 Shikimate dehydrogenase substrate binding domain ISU54_RS11245 PF01797 Transposase IS200 like ISU54_RS11250 PF02378 Phosphotransferase system, EIIC ISU54_RS11250 PF00367 phosphotransferase system, EIIB ISU54_RS11255 PF01026 TatD related DNase ISU54_RS11260 PF09115 DNA polymerase III, delta subunit, C terminal ISU54_RS11265 PF02223 Thymidylate kinase ISU54_RS11270 PF02618 YceG-like family ISU54_RS11275 PF01063 Amino-transferase class IV ISU54_RS11280 PF01797 Transposase IS200 like ISU54_RS11285 PF02801 Beta-ketoacyl synthase, C-terminal domain ISU54_RS11285 PF00109 Beta-ketoacyl synthase, N-terminal domain ISU54_RS11290 PF00550 Phosphopantetheine attachment site ISU54_RS11300 PF00698 Acyl transferase domain ISU54_RS11305 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ISU54_RS11305 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ISU54_RS11310 PF02504 Fatty acid synthesis protein ISU54_RS11315 PF01783 Ribosomal L32p protein family ISU54_RS11320 PF02620 Large ribosomal RNA subunit accumulation protein YceD ISU54_RS11325 PF02545 Maf-like protein ISU54_RS11330 PF00849 RNA pseudouridylate synthase ISU54_RS11330 PF01479 S4 domain ISU54_RS11335 PF12111 Polyribonucleotide phosphorylase C terminal ISU54_RS11335 PF10150 Ribonuclease E/G family ISU54_RS11335 PF00575 S1 RNA binding domain ISU54_RS11340 PF00872 Transposase, Mutator family ISU54_RS11345 PF13991 BssS protein family ISU54_RS11350 PF06183 DinI-like family ISU54_RS11355 PF01979 Amidohydrolase family ISU54_RS11360 PF03992 Antibiotic biosynthesis monooxygenase ISU54_RS11370 PF00872 Transposase, Mutator family ISU54_RS11375 PF01266 FAD dependent oxidoreductase ISU54_RS11380 PF00196 Bacterial regulatory proteins, luxR family ISU54_RS11390 PF01594 AI-2E family transporter ISU54_RS11395 PF12368 Rhodanase C-terminal ISU54_RS11395 PF00581 Rhodanese-like domain ISU54_RS11395 PF17773 UPF0176 acylphosphatase like domain ISU54_RS11410 PF00765 Autoinducer synthase ISU54_RS11415 PF03472 Autoinducer binding domain ISU54_RS11415 PF00196 Bacterial regulatory proteins, luxR family ISU54_RS11420 PF03466 LysR substrate binding domain ISU54_RS11420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU54_RS11430 PF00083 Sugar (and other) transporter ISU54_RS11440 PF00248 Aldo/keto reductase family ISU54_RS11445 PF09618 CRISPR-associated protein (Cas_Csy4) ISU54_RS11450 PF09615 CRISPR-associated protein (Cas_Csy3) ISU54_RS11455 PF09614 CRISPR-associated protein (Cas_Csy2) ISU54_RS11460 PF09611 CRISPR-associated protein (Cas_Csy1) ISU54_RS11470 PF01867 CRISPR associated protein Cas1 ISU54_RS11475 PF00924 Mechanosensitive ion channel ISU54_RS11500 PF04041 beta-1,4-mannooligosaccharide phosphorylase ISU54_RS11505 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS11510 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS11520 PF00356 Bacterial regulatory proteins, lacI family ISU54_RS11525 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ISU54_RS11525 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ISU54_RS11525 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ISU54_RS11525 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ISU54_RS11530 PF17912 MalK OB fold domain ISU54_RS11530 PF00005 ABC transporter ISU54_RS11540 PF05594 Haemagluttinin repeat ISU54_RS11540 PF13332 Hemagglutinin repeat ISU54_RS11540 PF05860 haemagglutination activity domain ISU54_RS11540 PF15526 Novel toxin 21 ISU54_RS11540 PF04829 Pre-toxin domain with VENN motif ISU54_RS11580 PF13018 Extended Signal Peptide of Type V secretion system ISU54_RS11580 PF05860 haemagglutination activity domain ISU54_RS11580 PF13332 Hemagglutinin repeat ISU54_RS11580 PF04829 Pre-toxin domain with VENN motif ISU54_RS11585 PF08479 POTRA domain, ShlB-type ISU54_RS11585 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ISU54_RS11585 PF17287 POTRA domain ISU54_RS11590 PF00175 Oxidoreductase NAD-binding domain ISU54_RS11590 PF00970 Oxidoreductase FAD-binding domain ISU54_RS11590 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU54_RS11600 PF02028 BCCT, betaine/carnitine/choline family transporter ISU54_RS11610 PF00180 Isocitrate/isopropylmalate dehydrogenase ISU54_RS11615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU54_RS11615 PF03466 LysR substrate binding domain ISU54_RS11620 PF00356 Bacterial regulatory proteins, lacI family ISU54_RS11625 PF02653 Branched-chain amino acid transport system / permease component ISU54_RS11630 PF00005 ABC transporter ISU54_RS11635 PF13407 Periplasmic binding protein domain ISU54_RS11640 PF00107 Zinc-binding dehydrogenase ISU54_RS11640 PF08240 Alcohol dehydrogenase GroES-like domain ISU54_RS11660 PF13505 Outer membrane protein beta-barrel domain ISU54_RS11665 PF00892 EamA-like transporter family ISU54_RS11675 PF13649 Methyltransferase domain ISU54_RS11680 PF00210 Ferritin-like domain ISU54_RS11690 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU54_RS11695 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS11700 PF00005 ABC transporter ISU54_RS11705 PF13426 PAS domain ISU54_RS11705 PF08447 PAS fold ISU54_RS11705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ISU54_RS11710 PF02796 Helix-turn-helix domain of resolvase ISU54_RS11710 PF00665 Integrase core domain ISU54_RS11715 PF01695 IstB-like ATP binding protein ISU54_RS11725 PF05971 RNA methyltransferase ISU54_RS11730 PF07338 Protein of unknown function (DUF1471) ISU54_RS11735 PF02885 Glycosyl transferase family, helical bundle domain ISU54_RS11745 PF13378 Enolase C-terminal domain-like ISU54_RS11750 PF00378 Enoyl-CoA hydratase/isomerase ISU54_RS11755 PF12697 Alpha/beta hydrolase family ISU54_RS11760 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU54_RS11760 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU54_RS11760 PF16582 Middle domain of thiamine pyrophosphate ISU54_RS11765 PF00425 chorismate binding enzyme ISU54_RS11775 PF05957 Bacterial protein of unknown function (DUF883) ISU54_RS11780 PF00920 Dehydratase family ISU54_RS11785 PF03928 Haem-degrading ISU54_RS11790 PF07690 Major Facilitator Superfamily ISU54_RS11795 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU54_RS11795 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU54_RS11800 PF00356 Bacterial regulatory proteins, lacI family ISU54_RS11805 PF02638 Glycosyl hydrolase-like 10 ISU54_RS11820 PF01202 Shikimate kinase ISU54_RS11825 PF00106 short chain dehydrogenase ISU54_RS11830 PF04074 YhcH/YjgK/YiaL ISU54_RS11840 PF00361 Proton-conducting membrane transporter ISU54_RS11845 PF00361 Proton-conducting membrane transporter ISU54_RS11850 PF00361 Proton-conducting membrane transporter ISU54_RS11850 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ISU54_RS11855 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ISU54_RS11860 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ISU54_RS11865 PF12838 4Fe-4S dicluster domain ISU54_RS11870 PF00146 NADH dehydrogenase ISU54_RS11875 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ISU54_RS11875 PF00384 Molybdopterin oxidoreductase ISU54_RS11875 PF01568 Molydopterin dinucleotide binding domain ISU54_RS11875 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ISU54_RS11880 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ISU54_RS11880 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ISU54_RS11880 PF10531 SLBB domain ISU54_RS11890 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ISU54_RS11890 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ISU54_RS11895 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ISU54_RS11900 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ISU54_RS11905 PF03466 LysR substrate binding domain ISU54_RS11905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU54_RS11910 PF00155 Aminotransferase class I and II ISU54_RS11920 PF02080 TrkA-C domain ISU54_RS11920 PF03600 Citrate transporter ISU54_RS11925 PF13419 Haloacid dehalogenase-like hydrolase ISU54_RS11930 PF03887 YfbU domain ISU54_RS11935 PF04217 Protein of unknown function, DUF412 ISU54_RS11940 PF00871 Acetokinase family ISU54_RS11945 PF01515 Phosphate acetyl/butaryl transferase ISU54_RS11945 PF07085 DRTGG domain ISU54_RS11950 PF00356 Bacterial regulatory proteins, lacI family ISU54_RS11950 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ISU54_RS11955 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ISU54_RS11965 PF00872 Transposase, Mutator family ISU54_RS11970 PF03611 PTS system sugar-specific permease component ISU54_RS11975 PF00293 NUDIX domain ISU54_RS11980 PF12850 Calcineurin-like phosphoesterase superfamily domain ISU54_RS11990 PF01370 NAD dependent epimerase/dehydratase family ISU54_RS11990 PF08338 Domain of unknown function (DUF1731) ISU54_RS11995 PF00005 ABC transporter ISU54_RS12000 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS12005 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS12010 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU54_RS12015 PF02441 Flavoprotein ISU54_RS12020 PF00156 Phosphoribosyl transferase domain ISU54_RS12025 PF02674 Colicin V production protein ISU54_RS12030 PF05036 Sporulation related domain ISU54_RS12035 PF02875 Mur ligase family, glutamate ligase domain ISU54_RS12035 PF08245 Mur ligase middle domain ISU54_RS12040 PF17848 Acetyl-coA carboxylase zinc finger domain ISU54_RS12040 PF01039 Carboxyl transferase domain ISU54_RS12045 PF09335 SNARE associated Golgi protein ISU54_RS12050 PF01416 tRNA pseudouridine synthase ISU54_RS12055 PF02774 Semialdehyde dehydrogenase, dimerisation domain ISU54_RS12055 PF01118 Semialdehyde dehydrogenase, NAD binding domain ISU54_RS12060 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ISU54_RS12060 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ISU54_RS12060 PF11890 Domain of unknown function (DUF3410) ISU54_RS12070 PF00892 EamA-like transporter family ISU54_RS12080 PF00419 Fimbrial protein ISU54_RS12085 PF01177 Asp/Glu/Hydantoin racemase ISU54_RS12090 PF00109 Beta-ketoacyl synthase, N-terminal domain ISU54_RS12090 PF02801 Beta-ketoacyl synthase, C-terminal domain ISU54_RS12095 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ISU54_RS12095 PF01266 FAD dependent oxidoreductase ISU54_RS12100 PF08891 YfcL protein ISU54_RS12105 PF04315 Elongation factor P hydroxylase ISU54_RS12110 PF01925 Sulfite exporter TauE/SafE ISU54_RS12115 PF03411 Penicillin-insensitive murein endopeptidase ISU54_RS12120 PF01264 Chorismate synthase ISU54_RS12125 PF05175 Methyltransferase small domain ISU54_RS12130 PF01713 Smr domain ISU54_RS12135 PF00300 Histidine phosphatase superfamily (branch 1) ISU54_RS12140 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ISU54_RS12140 PF00378 Enoyl-CoA hydratase/isomerase ISU54_RS12140 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ISU54_RS12145 PF00108 Thiolase, N-terminal domain ISU54_RS12145 PF02803 Thiolase, C-terminal domain ISU54_RS12150 PF04175 Protein of unknown function (DUF406) ISU54_RS12155 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) ISU54_RS12160 PF04333 MlaA lipoprotein ISU54_RS12165 PF03918 Cytochrome C biogenesis protein ISU54_RS12170 PF03918 Cytochrome C biogenesis protein ISU54_RS12175 PF08534 Redoxin ISU54_RS12180 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal ISU54_RS12180 PF01578 Cytochrome C assembly protein ISU54_RS12185 PF03100 CcmE ISU54_RS12190 PF04995 Heme exporter protein D (CcmD) ISU54_RS12195 PF01578 Cytochrome C assembly protein ISU54_RS12200 PF03379 CcmB protein ISU54_RS12205 PF00005 ABC transporter ISU54_RS12220 PF04011 LemA family ISU54_RS12230 PF03831 PhnA domain ISU54_RS12230 PF08274 PhnA Zinc-Ribbon ISU54_RS12245 PF07024 ImpE protein ISU54_RS12260 PF06715 Gp5 C-terminal repeat (3 copies) ISU54_RS12260 PF04717 Type VI secretion system, phage-baseplate injector ISU54_RS12265 PF14331 ImcF-related N-terminal domain ISU54_RS12265 PF06761 Intracellular multiplication and human macrophage-killing ISU54_RS12265 PF06744 Type VI secretion protein IcmF C-terminal ISU54_RS12275 PF01695 IstB-like ATP binding protein ISU54_RS12280 PF02796 Helix-turn-helix domain of resolvase ISU54_RS12280 PF00665 Integrase core domain ISU54_RS12290 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE ISU54_RS12305 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ISU54_RS12310 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 ISU54_RS12320 PF13954 PapC N-terminal domain ISU54_RS12320 PF13953 PapC C-terminal domain ISU54_RS12320 PF00577 Outer membrane usher protein ISU54_RS12325 PF00872 Transposase, Mutator family ISU54_RS12330 PF00577 Outer membrane usher protein ISU54_RS12330 PF13954 PapC N-terminal domain ISU54_RS12330 PF13953 PapC C-terminal domain ISU54_RS12335 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU54_RS12335 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU54_RS12340 PF16970 Type-1 fimbrial protein, A ISU54_RS12345 PF10431 C-terminal, D2-small domain, of ClpB protein ISU54_RS12345 PF17871 AAA lid domain ISU54_RS12345 PF00004 ATPase family associated with various cellular activities (AAA) ISU54_RS12345 PF07724 AAA domain (Cdc48 subfamily) ISU54_RS12350 PF05947 Type VI secretion system, TssF ISU54_RS12395 PF13406 Transglycosylase SLT domain ISU54_RS12405 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS12410 PF00005 ABC transporter ISU54_RS12420 PF05638 Type VI secretion system effector, Hcp ISU54_RS12430 PF00384 Molybdopterin oxidoreductase ISU54_RS12430 PF01568 Molydopterin dinucleotide binding domain ISU54_RS12430 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ISU54_RS12435 PF13247 4Fe-4S dicluster domain ISU54_RS12435 PF12800 4Fe-4S binding domain ISU54_RS12440 PF04976 DMSO reductase anchor subunit (DmsC) ISU54_RS12445 PF02613 Nitrate reductase delta subunit ISU54_RS12455 PF05643 Putative bacterial lipoprotein (DUF799) ISU54_RS12465 PF03783 Curli production assembly/transport component CsgG ISU54_RS12475 PF01292 Prokaryotic cytochrome b561 ISU54_RS12480 PF00155 Aminotransferase class I and II ISU54_RS12485 PF07350 Protein of unknown function (DUF1479) ISU54_RS12490 PF02685 Glucokinase ISU54_RS12500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU54_RS12500 PF03466 LysR substrate binding domain ISU54_RS12505 PF00248 Aldo/keto reductase family ISU54_RS12515 PF01566 Natural resistance-associated macrophage protein ISU54_RS12520 PF01773 Na+ dependent nucleoside transporter N-terminus ISU54_RS12520 PF07662 Na+ dependent nucleoside transporter C-terminus ISU54_RS12520 PF07670 Nucleoside recognition ISU54_RS12555 PF00749 tRNA synthetases class I (E and Q), catalytic domain ISU54_RS12560 PF01797 Transposase IS200 like ISU54_RS12585 PF12843 Putative quorum-sensing-regulated virulence factor ISU54_RS12590 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ISU54_RS12590 PF03120 NAD-dependent DNA ligase OB-fold domain ISU54_RS12590 PF01653 NAD-dependent DNA ligase adenylation domain ISU54_RS12590 PF00533 BRCA1 C Terminus (BRCT) domain ISU54_RS12590 PF12826 Helix-hairpin-helix motif ISU54_RS12595 PF04354 ZipA, C-terminal FtsZ-binding domain ISU54_RS12605 PF00291 Pyridoxal-phosphate dependent enzyme ISU54_RS12610 PF00381 PTS HPr component phosphorylation site ISU54_RS12615 PF02896 PEP-utilising enzyme, TIM barrel domain ISU54_RS12615 PF00391 PEP-utilising enzyme, mobile domain ISU54_RS12615 PF05524 PEP-utilising enzyme, N-terminal ISU54_RS12620 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ISU54_RS12625 PF01797 Transposase IS200 like ISU54_RS12630 PF00672 HAMP domain ISU54_RS12630 PF00512 His Kinase A (phospho-acceptor) domain ISU54_RS12630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU54_RS12630 PF16527 Two-component sensor protein CpxA, periplasmic domain ISU54_RS12635 PF00072 Response regulator receiver domain ISU54_RS12635 PF00486 Transcriptional regulatory protein, C terminal ISU54_RS12640 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU54_RS12645 PF12704 MacB-like periplasmic core domain ISU54_RS12645 PF00005 ABC transporter ISU54_RS12645 PF02687 FtsX-like permease family ISU54_RS12650 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU54_RS12650 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISU54_RS12655 PF00474 Sodium:solute symporter family ISU54_RS12665 PF00557 Metallopeptidase family M24 ISU54_RS12675 PF00155 Aminotransferase class I and II ISU54_RS12685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU54_RS12685 PF00512 His Kinase A (phospho-acceptor) domain ISU54_RS12685 PF00672 HAMP domain ISU54_RS12690 PF00072 Response regulator receiver domain ISU54_RS12690 PF00486 Transcriptional regulatory protein, C terminal ISU54_RS12700 PF00291 Pyridoxal-phosphate dependent enzyme ISU54_RS12705 PF00005 ABC transporter ISU54_RS12710 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS12715 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS12725 PF07690 Major Facilitator Superfamily ISU54_RS12730 PF01380 SIS domain ISU54_RS12730 PF01418 Helix-turn-helix domain, rpiR family ISU54_RS12735 PF04074 YhcH/YjgK/YiaL ISU54_RS12740 PF00480 ROK family ISU54_RS12745 PF12468 Type III secretion system leucine rich repeat protein ISU54_RS12750 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase ISU54_RS12755 PF00701 Dihydrodipicolinate synthetase family ISU54_RS12760 PF04261 Dyp-type peroxidase family ISU54_RS12765 PF06572 Protein of unknown function (DUF1131) ISU54_RS12770 PF04076 Bacterial OB fold (BOF) protein ISU54_RS12775 PF03797 Autotransporter beta-domain ISU54_RS12775 PF13018 Extended Signal Peptide of Type V secretion system ISU54_RS12775 PF03212 Pertactin ISU54_RS12775 PF16168 Adhesin of bacterial autotransporter system, probable stalk ISU54_RS12785 PF00583 Acetyltransferase (GNAT) family ISU54_RS12790 PF01218 Coproporphyrinogen III oxidase ISU54_RS12795 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ISU54_RS12800 PF01515 Phosphate acetyl/butaryl transferase ISU54_RS12800 PF03949 Malic enzyme, NAD binding domain ISU54_RS12800 PF00390 Malic enzyme, N-terminal domain ISU54_RS12805 PF00293 NUDIX domain ISU54_RS12810 PF03264 NapC/NirT cytochrome c family, N-terminal region ISU54_RS12815 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) ISU54_RS12825 PF03927 NapD protein ISU54_RS12830 PF12800 4Fe-4S binding domain ISU54_RS12830 PF13187 4Fe-4S dicluster domain ISU54_RS12830 PF00037 4Fe-4S binding domain ISU54_RS12835 PF00196 Bacterial regulatory proteins, luxR family ISU54_RS12835 PF00072 Response regulator receiver domain ISU54_RS12845 PF00873 AcrB/AcrD/AcrF family ISU54_RS12855 PF04307 LexA-binding, inner membrane-associated putative hydrolase ISU54_RS12860 PF04055 Radical SAM superfamily ISU54_RS12860 PF13186 Iron-sulfur cluster-binding domain ISU54_RS12865 PF00884 Sulfatase ISU54_RS12875 PF00005 ABC transporter ISU54_RS12875 PF08402 TOBE domain ISU54_RS12880 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS12895 PF03960 ArsC family ISU54_RS12900 PF01546 Peptidase family M20/M25/M40 ISU54_RS12900 PF07687 Peptidase dimerisation domain ISU54_RS12905 PF02557 D-alanyl-D-alanine carboxypeptidase ISU54_RS12910 PF13980 Uncharacterised protein family (UPF0370) ISU54_RS12915 PF17176 tRNA-binding domain ISU54_RS12915 PF13718 GNAT acetyltransferase 2 ISU54_RS12915 PF08351 Domain of unknown function (DUF1726) ISU54_RS12915 PF05127 Helicase ISU54_RS12920 PF04284 Protein of unknown function (DUF441) ISU54_RS12925 PF04228 Putative neutral zinc metallopeptidase ISU54_RS12930 PF01259 SAICAR synthetase ISU54_RS12935 PF01797 Transposase IS200 like ISU54_RS12940 PF06804 NlpB/DapX lipoprotein ISU54_RS12945 PF00701 Dihydrodipicolinate synthetase family ISU54_RS12950 PF01842 ACT domain ISU54_RS12955 PF00578 AhpC/TSA family ISU54_RS12965 PF01594 AI-2E family transporter ISU54_RS12970 PF07720 Tetratricopeptide repeat ISU54_RS12970 PF01435 Peptidase family M48 ISU54_RS12975 PF03960 ArsC family ISU54_RS12980 PF00308 Bacterial dnaA protein ISU54_RS12985 PF01797 Transposase IS200 like ISU54_RS12995 PF02769 AIR synthase related protein, C-terminal domain ISU54_RS12995 PF00586 AIR synthase related protein, N-terminal domain ISU54_RS13000 PF00551 Formyl transferase ISU54_RS13005 PF13302 Acetyltransferase (GNAT) domain ISU54_RS13015 PF00005 ABC transporter ISU54_RS13020 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS13025 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS13030 PF13090 Polyphosphate kinase C-terminal domain 2 ISU54_RS13030 PF02503 Polyphosphate kinase middle domain ISU54_RS13030 PF13089 Polyphosphate kinase N-terminal domain ISU54_RS13030 PF17941 Polyphosphate kinase C-terminal domain 1 ISU54_RS13035 PF02541 Ppx/GppA phosphatase family ISU54_RS13045 PF00571 CBS domain ISU54_RS13045 PF03448 MgtE intracellular N domain ISU54_RS13045 PF01769 Divalent cation transporter ISU54_RS13055 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS13060 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS13070 PF00202 Aminotransferase class-III ISU54_RS13075 PF00392 Bacterial regulatory proteins, gntR family ISU54_RS13075 PF00155 Aminotransferase class I and II ISU54_RS13080 PF00005 ABC transporter ISU54_RS13080 PF08402 TOBE domain ISU54_RS13085 PF13533 Biotin-lipoyl like ISU54_RS13090 PF00873 AcrB/AcrD/AcrF family ISU54_RS13095 PF00873 AcrB/AcrD/AcrF family ISU54_RS13100 PF07690 Major Facilitator Superfamily ISU54_RS13110 PF00072 Response regulator receiver domain ISU54_RS13110 PF00486 Transcriptional regulatory protein, C terminal ISU54_RS13115 PF07411 Domain of unknown function (DUF1508) ISU54_RS13120 PF01136 Peptidase family U32 ISU54_RS13120 PF16325 Peptidase family U32 C-terminal domain ISU54_RS13125 PF00781 Diacylglycerol kinase catalytic domain ISU54_RS13145 PF08543 Phosphomethylpyrimidine kinase ISU54_RS13160 PF00872 Transposase, Mutator family ISU54_RS13185 PF05638 Type VI secretion system effector, Hcp ISU54_RS13190 PF01797 Transposase IS200 like ISU54_RS13195 PF00958 GMP synthase C terminal domain ISU54_RS13195 PF00117 Glutamine amidotransferase class-I ISU54_RS13195 PF02540 NAD synthase ISU54_RS13200 PF00478 IMP dehydrogenase / GMP reductase domain ISU54_RS13200 PF00571 CBS domain ISU54_RS13205 PF13742 OB-fold nucleic acid binding domain ISU54_RS13205 PF02601 Exonuclease VII, large subunit ISU54_RS13210 PF07191 zinc-ribbons ISU54_RS13220 PF01926 50S ribosome-binding GTPase ISU54_RS13220 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ISU54_RS13225 PF13360 PQQ-like domain ISU54_RS13230 PF09976 Tetratricopeptide repeat-like domain ISU54_RS13235 PF13393 Histidyl-tRNA synthetase ISU54_RS13235 PF03129 Anticodon binding domain ISU54_RS13240 PF04551 GcpE protein ISU54_RS13245 PF13464 Domain of unknown function (DUF4115) ISU54_RS13255 PF04055 Radical SAM superfamily ISU54_RS13260 PF00334 Nucleoside diphosphate kinase ISU54_RS13270 PF16168 Adhesin of bacterial autotransporter system, probable stalk ISU54_RS13270 PF03797 Autotransporter beta-domain ISU54_RS13270 PF03212 Pertactin ISU54_RS13275 PF16168 Adhesin of bacterial autotransporter system, probable stalk ISU54_RS13275 PF03212 Pertactin ISU54_RS13275 PF03797 Autotransporter beta-domain ISU54_RS13290 PF07179 SseB protein N-terminal domain ISU54_RS13290 PF14581 SseB protein C-terminal domain ISU54_RS13295 PF00883 Cytosol aminopeptidase family, catalytic domain ISU54_RS13295 PF12404 Peptidase ISU54_RS13300 PF04384 Iron-sulphur cluster assembly ISU54_RS13305 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU54_RS13310 PF00012 Hsp70 protein ISU54_RS13315 PF07743 HSCB C-terminal oligomerisation domain ISU54_RS13315 PF00226 DnaJ domain ISU54_RS13320 PF01521 Iron-sulphur cluster biosynthesis ISU54_RS13325 PF01592 NifU-like N terminal domain ISU54_RS13330 PF00266 Aminotransferase class-V ISU54_RS13335 PF02082 Transcriptional regulator ISU54_RS13340 PF00588 SpoU rRNA Methylase family ISU54_RS13345 PF00459 Inositol monophosphatase family ISU54_RS13350 PF03824 High-affinity nickel-transport protein ISU54_RS13355 PF06226 Protein of unknown function (DUF1007) ISU54_RS13360 PF00874 PRD domain ISU54_RS13365 PF12832 MFS_1 like family ISU54_RS13370 PF13505 Outer membrane protein beta-barrel domain ISU54_RS13380 PF00464 Serine hydroxymethyltransferase ISU54_RS13385 PF00175 Oxidoreductase NAD-binding domain ISU54_RS13385 PF00042 Globin ISU54_RS13385 PF00970 Oxidoreductase FAD-binding domain ISU54_RS13395 PF01695 IstB-like ATP binding protein ISU54_RS13400 PF00665 Integrase core domain ISU54_RS13400 PF02796 Helix-turn-helix domain of resolvase ISU54_RS13410 PF00543 Nitrogen regulatory protein P-II ISU54_RS13415 PF00795 Carbon-nitrogen hydrolase ISU54_RS13415 PF02540 NAD synthase ISU54_RS13420 PF00158 Sigma-54 interaction domain ISU54_RS13420 PF00072 Response regulator receiver domain ISU54_RS13425 PF13942 YfhG lipoprotein ISU54_RS13430 PF00512 His Kinase A (phospho-acceptor) domain ISU54_RS13430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU54_RS13435 PF01797 Transposase IS200 like ISU54_RS13460 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal ISU54_RS13460 PF02769 AIR synthase related protein, C-terminal domain ISU54_RS13460 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ISU54_RS13465 PF01464 Transglycosylase SLT domain ISU54_RS13465 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU54_RS13470 PF14437 MafB19-like deaminase ISU54_RS13480 PF01380 SIS domain ISU54_RS13485 PF01418 Helix-turn-helix domain, rpiR family ISU54_RS13485 PF01380 SIS domain ISU54_RS13490 PF12838 4Fe-4S dicluster domain ISU54_RS13495 PF01797 Transposase IS200 like ISU54_RS13500 PF01648 4'-phosphopantetheinyl transferase superfamily ISU54_RS13505 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ISU54_RS13510 PF11967 Recombination protein O N terminal ISU54_RS13510 PF02565 Recombination protein O C terminal ISU54_RS13515 PF07650 KH domain ISU54_RS13515 PF01926 50S ribosome-binding GTPase ISU54_RS13520 PF00035 Double-stranded RNA binding motif ISU54_RS13520 PF14622 Ribonuclease-III-like ISU54_RS13525 PF10502 Signal peptidase, peptidase S26 ISU54_RS13530 PF00009 Elongation factor Tu GTP binding domain ISU54_RS13530 PF03144 Elongation factor Tu domain 2 ISU54_RS13530 PF06421 GTP-binding protein LepA C-terminus ISU54_RS13530 PF00679 Elongation factor G C-terminus ISU54_RS13545 PF03888 MucB/RseB N-terminal domain ISU54_RS13545 PF17188 MucB/RseB C-terminal domain ISU54_RS13550 PF03873 Anti sigma-E protein RseA, C-terminal domain ISU54_RS13550 PF03872 Anti sigma-E protein RseA, N-terminal domain ISU54_RS13555 PF08281 Sigma-70, region 4 ISU54_RS13555 PF04542 Sigma-70 region 2 ISU54_RS13560 PF00890 FAD binding domain ISU54_RS13560 PF02910 Fumarate reductase flavoprotein C-term ISU54_RS13565 PF05175 Methyltransferase small domain ISU54_RS13570 PF00270 DEAD/DEAH box helicase ISU54_RS13570 PF00271 Helicase conserved C-terminal domain ISU54_RS13575 PF12796 Ankyrin repeats (3 copies) ISU54_RS13585 PF01228 Glycine radical ISU54_RS13590 PF03167 Uracil DNA glycosylase superfamily ISU54_RS13595 PF01470 Pyroglutamyl peptidase ISU54_RS13610 PF03746 LamB/YcsF family ISU54_RS13615 PF02626 Carboxyltransferase domain, subdomain A and B ISU54_RS13630 PF01784 NIF3 (NGG1p interacting factor 3) ISU54_RS13635 PF02112 cAMP phosphodiesterases class-II ISU54_RS13640 PF03441 FAD binding domain of DNA photolyase ISU54_RS13640 PF00875 DNA photolyase ISU54_RS13645 PF08349 Protein of unknown function (DUF1722) ISU54_RS13650 PF10725 Protein of unknown function (DUF2517) ISU54_RS13665 PF03814 Potassium-transporting ATPase A subunit ISU54_RS13675 PF02669 K+-transporting ATPase, c chain ISU54_RS13680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU54_RS13680 PF00512 His Kinase A (phospho-acceptor) domain ISU54_RS13680 PF13493 Domain of unknown function (DUF4118) ISU54_RS13680 PF02702 Osmosensitive K+ channel His kinase sensor domain ISU54_RS13680 PF13492 GAF domain ISU54_RS13685 PF00072 Response regulator receiver domain ISU54_RS13685 PF00486 Transcriptional regulatory protein, C terminal ISU54_RS13700 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ISU54_RS13700 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ISU54_RS13700 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ISU54_RS13700 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ISU54_RS13705 PF03925 SeqA protein C-terminal domain ISU54_RS13705 PF17206 SeqA protein N-terminal domain ISU54_RS13715 PF04794 YdjC-like protein ISU54_RS13720 PF07883 Cupin domain ISU54_RS13720 PF12833 Helix-turn-helix domain ISU54_RS13725 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit ISU54_RS13730 PF02378 Phosphotransferase system, EIIC ISU54_RS13735 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ISU54_RS13745 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ISU54_RS13750 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ISU54_RS13755 PF07885 Ion channel ISU54_RS13755 PF02254 TrkA-N domain ISU54_RS13760 PF06411 HdeA/HdeB family ISU54_RS13765 PF03824 High-affinity nickel-transport protein ISU54_RS13770 PF03253 Urea transporter ISU54_RS13780 PF02492 CobW/HypB/UreG, nucleotide-binding domain ISU54_RS13785 PF01730 UreF ISU54_RS13790 PF05194 UreE urease accessory protein, C-terminal domain ISU54_RS13790 PF02814 UreE urease accessory protein, N-terminal domain ISU54_RS13795 PF00449 Urease alpha-subunit, N-terminal domain ISU54_RS13795 PF01979 Amidohydrolase family ISU54_RS13800 PF00699 Urease beta subunit ISU54_RS13805 PF00547 Urease, gamma subunit ISU54_RS13810 PF00005 ABC transporter ISU54_RS13815 PF00005 ABC transporter ISU54_RS13820 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS13820 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU54_RS13825 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS13830 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU54_RS13835 PF00313 'Cold-shock' DNA-binding domain ISU54_RS13845 PF06711 Protein of unknown function (DUF1198) ISU54_RS13850 PF09400 Protein of unknown function (DUF2002) ISU54_RS13855 PF06392 Acid shock protein repeat ISU54_RS13870 PF02867 Ribonucleotide reductase, barrel domain ISU54_RS13870 PF00317 Ribonucleotide reductase, all-alpha domain ISU54_RS13870 PF08343 Ribonucleotide reductase N-terminal ISU54_RS13875 PF00268 Ribonucleotide reductase, small chain ISU54_RS13880 PF00571 CBS domain ISU54_RS13880 PF00005 ABC transporter ISU54_RS13885 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS13890 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ISU54_RS13905 PF00665 Integrase core domain ISU54_RS13905 PF02796 Helix-turn-helix domain of resolvase ISU54_RS13910 PF01695 IstB-like ATP binding protein ISU54_RS13925 PF13356 Arm DNA-binding domain ISU54_RS13925 PF00589 Phage integrase family ISU54_RS13935 PF12697 Alpha/beta hydrolase family ISU54_RS13940 PF01402 Ribbon-helix-helix protein, copG family ISU54_RS13945 PF00258 Flavodoxin ISU54_RS13950 PF01475 Ferric uptake regulator family ISU54_RS13960 PF03573 outer membrane porin, OprD family ISU54_RS13965 PF00749 tRNA synthetases class I (E and Q), catalytic domain ISU54_RS13965 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ISU54_RS13970 PF01797 Transposase IS200 like ISU54_RS13975 PF00367 phosphotransferase system, EIIB ISU54_RS13975 PF02378 Phosphotransferase system, EIIC ISU54_RS13975 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ISU54_RS13980 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ISU54_RS13985 PF01979 Amidohydrolase family ISU54_RS13990 PF00480 ROK family ISU54_RS13990 PF01047 MarR family ISU54_RS13995 PF13344 Haloacid dehalogenase-like hydrolase ISU54_RS14000 PF00733 Asparagine synthase ISU54_RS14000 PF13537 Glutamine amidotransferase domain ISU54_RS14035 PF01494 FAD binding domain ISU54_RS14040 PF00919 Uncharacterized protein family UPF0004 ISU54_RS14040 PF01938 TRAM domain ISU54_RS14040 PF04055 Radical SAM superfamily ISU54_RS14045 PF02562 PhoH-like protein ISU54_RS14050 PF02130 Uncharacterized protein family UPF0054 ISU54_RS14055 PF00571 CBS domain ISU54_RS14055 PF03471 Transporter associated domain ISU54_RS14060 PF00795 Carbon-nitrogen hydrolase ISU54_RS14065 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU54_RS14070 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS14075 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS14080 PF00005 ABC transporter ISU54_RS14085 PF07295 Zinc-ribbon containing domain ISU54_RS14090 PF13603 Leucyl-tRNA synthetase, Domain 2 ISU54_RS14090 PF00133 tRNA synthetases class I (I, L, M and V) ISU54_RS14090 PF08264 Anticodon-binding domain of tRNA ISU54_RS14095 PF04390 Lipopolysaccharide-assembly ISU54_RS14100 PF14840 Processivity clamp loader gamma complex DNA pol III C-term ISU54_RS14100 PF06144 DNA polymerase III, delta subunit ISU54_RS14105 PF01467 Cytidylyltransferase-like ISU54_RS14115 PF02590 Predicted SPOUT methyltransferase ISU54_RS14120 PF00905 Penicillin binding protein transpeptidase domain ISU54_RS14120 PF03717 Penicillin-binding Protein dimerisation domain ISU54_RS14125 PF01098 Cell cycle protein ISU54_RS14130 PF03330 Lytic transglycolase ISU54_RS14130 PF05036 Sporulation related domain ISU54_RS14135 PF00768 D-alanyl-D-alanine carboxypeptidase ISU54_RS14135 PF07943 Penicillin-binding protein 5, C-terminal domain ISU54_RS14140 PF04359 Protein of unknown function (DUF493) ISU54_RS14145 PF03099 Biotin/lipoate A/B protein ligase family ISU54_RS14150 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family ISU54_RS14150 PF04055 Radical SAM superfamily ISU54_RS14155 PF02416 mttA/Hcf106 family ISU54_RS14160 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ISU54_RS14165 PF00313 'Cold-shock' DNA-binding domain ISU54_RS14170 PF00313 'Cold-shock' DNA-binding domain ISU54_RS14175 PF00196 Bacterial regulatory proteins, luxR family ISU54_RS14200 PF00005 ABC transporter ISU54_RS14200 PF00664 ABC transporter transmembrane region ISU54_RS14210 PF04962 KduI/IolB family ISU54_RS14215 PF01261 Xylose isomerase-like TIM barrel ISU54_RS14220 PF00294 pfkB family carbohydrate kinase ISU54_RS14225 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ISU54_RS14225 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ISU54_RS14230 PF02653 Branched-chain amino acid transport system / permease component ISU54_RS14235 PF00005 ABC transporter ISU54_RS14240 PF13407 Periplasmic binding protein domain ISU54_RS14250 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU54_RS14250 PF00205 Thiamine pyrophosphate enzyme, central domain ISU54_RS14250 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU54_RS14255 PF00171 Aldehyde dehydrogenase family ISU54_RS14270 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain ISU54_RS14270 PF11974 Bacterial alpha-2-macroglobulin MG3 domain ISU54_RS14270 PF00207 Alpha-2-macroglobulin family ISU54_RS14270 PF01835 MG2 domain ISU54_RS14270 PF07703 Alpha-2-macroglobulin bait region domain ISU54_RS14270 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain ISU54_RS14270 PF17962 Bacterial macroglobulin domain 6 ISU54_RS14275 PF01797 Transposase IS200 like ISU54_RS14280 PF00905 Penicillin binding protein transpeptidase domain ISU54_RS14280 PF00912 Transglycosylase ISU54_RS14280 PF06832 Penicillin-Binding Protein C-terminus Family ISU54_RS14285 PF13693 Winged helix-turn-helix DNA-binding ISU54_RS14305 PF05638 Type VI secretion system effector, Hcp ISU54_RS14320 PF03212 Pertactin ISU54_RS14320 PF13018 Extended Signal Peptide of Type V secretion system ISU54_RS14320 PF03797 Autotransporter beta-domain ISU54_RS14320 PF16168 Adhesin of bacterial autotransporter system, probable stalk ISU54_RS14340 PF00872 Transposase, Mutator family ISU54_RS14355 PF01915 Glycosyl hydrolase family 3 C-terminal domain ISU54_RS14355 PF00933 Glycosyl hydrolase family 3 N terminal domain ISU54_RS14355 PF14310 Fibronectin type III-like domain ISU54_RS14365 PF00248 Aldo/keto reductase family ISU54_RS14370 PF00248 Aldo/keto reductase family ISU54_RS14375 PF03466 LysR substrate binding domain ISU54_RS14375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU54_RS14380 PF02796 Helix-turn-helix domain of resolvase ISU54_RS14380 PF00665 Integrase core domain ISU54_RS14385 PF01695 IstB-like ATP binding protein ISU54_RS14400 PF00782 Dual specificity phosphatase, catalytic domain ISU54_RS14405 PF12147 Putative methyltransferase ISU54_RS14405 PF12146 Serine aminopeptidase, S33 ISU54_RS14410 PF01553 Acyltransferase ISU54_RS14420 PF01066 CDP-alcohol phosphatidyltransferase ISU54_RS14430 PF00589 Phage integrase family ISU54_RS14460 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ISU54_RS14460 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ISU54_RS14470 PF01797 Transposase IS200 like ISU54_RS14475 PF01406 tRNA synthetases class I (C) catalytic domain ISU54_RS14475 PF09190 DALR domain ISU54_RS14480 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ISU54_RS14485 PF00149 Calcineurin-like phosphoesterase ISU54_RS14490 PF00731 AIR carboxylase ISU54_RS14495 PF02222 ATP-grasp domain ISU54_RS14495 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ISU54_RS14505 PF00005 ABC transporter ISU54_RS14510 PF13472 GDSL-like Lipase/Acylhydrolase family ISU54_RS14515 PF00106 short chain dehydrogenase ISU54_RS14520 PF00085 Thioredoxin ISU54_RS14525 PF01145 SPFH domain / Band 7 family ISU54_RS14525 PF16200 C-terminal region of band_7 ISU54_RS14530 PF01957 NfeD-like C-terminal, partner-binding ISU54_RS14535 PF13411 MerR HTH family regulatory protein ISU54_RS14540 PF00403 Heavy-metal-associated domain ISU54_RS14545 PF01963 TraB family ISU54_RS14550 PF04073 Aminoacyl-tRNA editing domain ISU54_RS14565 PF07690 Major Facilitator Superfamily ISU54_RS14570 PF00999 Sodium/hydrogen exchanger family ISU54_RS14570 PF02254 TrkA-N domain ISU54_RS14575 PF00294 pfkB family carbohydrate kinase ISU54_RS14580 PF02706 Chain length determinant protein ISU54_RS14585 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ISU54_RS14585 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ISU54_RS14585 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ISU54_RS14585 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ISU54_RS14590 PF00535 Glycosyl transferase family 2 ISU54_RS14595 PF00483 Nucleotidyl transferase ISU54_RS14595 PF01050 Mannose-6-phosphate isomerase ISU54_RS14600 PF01370 NAD dependent epimerase/dehydratase family ISU54_RS14610 PF00534 Glycosyl transferases group 1 ISU54_RS14610 PF13439 Glycosyltransferase Family 4 ISU54_RS14640 PF01370 NAD dependent epimerase/dehydratase family ISU54_RS14645 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ISU54_RS14650 PF16363 GDP-mannose 4,6 dehydratase ISU54_RS14655 PF00483 Nucleotidyl transferase ISU54_RS14660 PF00175 Oxidoreductase NAD-binding domain ISU54_RS14660 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU54_RS14660 PF00970 Oxidoreductase FAD-binding domain ISU54_RS14665 PF00762 Ferrochelatase ISU54_RS14670 PF05191 Adenylate kinase, active site lid ISU54_RS14675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU54_RS14675 PF00183 Hsp90 protein ISU54_RS14680 PF13662 Toprim domain ISU54_RS14680 PF02132 RecR protein ISU54_RS14685 PF02575 YbaB/EbfC DNA-binding family ISU54_RS14690 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ISU54_RS14690 PF12170 DNA polymerase III tau subunit V interacting with alpha ISU54_RS14690 PF12169 DNA polymerase III subunits gamma and tau domain III ISU54_RS14695 PF00156 Phosphoribosyl transferase domain ISU54_RS14700 PF04304 Protein of unknown function (DUF454) ISU54_RS14710 PF10689 Protein of unknown function (DUF2496) ISU54_RS14715 PF00924 Mechanosensitive ion channel ISU54_RS14715 PF12795 Mechanosensitive ion channel porin domain ISU54_RS14715 PF12794 Mechanosensitive ion channel inner membrane domain 1 ISU54_RS14720 PF02635 DsrE/DsrF-like family ISU54_RS14725 PF08361 MAATS-type transcriptional repressor, C-terminal region ISU54_RS14725 PF00440 Bacterial regulatory proteins, tetR family ISU54_RS14730 PF00529 HlyD membrane-fusion protein of T1SS ISU54_RS14730 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU54_RS14735 PF00873 AcrB/AcrD/AcrF family ISU54_RS14740 PF01197 Ribosomal protein L31 ISU54_RS14745 PF00444 Ribosomal protein L36 ISU54_RS14755 PF10757 Biofilm formation regulator YbaJ ISU54_RS14760 PF05321 Haemolysin expression modulating protein ISU54_RS14770 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ISU54_RS14775 PF09619 Type III secretion system lipoprotein chaperone (YscW) ISU54_RS14785 PF00909 Ammonium Transporter Family ISU54_RS14790 PF00543 Nitrogen regulatory protein P-II ISU54_RS14795 PF00005 ABC transporter ISU54_RS14795 PF00664 ABC transporter transmembrane region ISU54_RS14800 PF00664 ABC transporter transmembrane region ISU54_RS14800 PF00005 ABC transporter ISU54_RS14805 PF01037 Lrp/AsnC ligand binding domain ISU54_RS14805 PF13404 AsnC-type helix-turn-helix domain ISU54_RS14810 PF00291 Pyridoxal-phosphate dependent enzyme ISU54_RS14820 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ISU54_RS14820 PF12793 Sugar transport-related sRNA regulator N-term ISU54_RS14825 PF06508 Queuosine biosynthesis protein QueC ISU54_RS14840 PF13145 PPIC-type PPIASE domain ISU54_RS14845 PF00216 Bacterial DNA-binding protein ISU54_RS14850 PF00004 ATPase family associated with various cellular activities (AAA) ISU54_RS14850 PF05362 Lon protease (S16) C-terminal proteolytic domain ISU54_RS14850 PF02190 ATP-dependent protease La (LON) substrate-binding domain ISU54_RS14855 PF06689 ClpX C4-type zinc finger ISU54_RS14855 PF07724 AAA domain (Cdc48 subfamily) ISU54_RS14855 PF10431 C-terminal, D2-small domain, of ClpB protein ISU54_RS14860 PF00574 Clp protease ISU54_RS14865 PF05698 Bacterial trigger factor protein (TF) C-terminus ISU54_RS14865 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISU54_RS14865 PF05697 Bacterial trigger factor protein (TF) ISU54_RS14870 PF01722 BolA-like protein ISU54_RS14875 PF08139 Prokaryotic membrane lipoprotein lipid attachment site ISU54_RS14875 PF03923 Uncharacterized lipoprotein ISU54_RS14880 PF07690 Major Facilitator Superfamily ISU54_RS14885 PF03502 Nucleoside-specific channel-forming protein, Tsx ISU54_RS14890 PF06481 COX Aromatic Rich Motif ISU54_RS14890 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ISU54_RS14895 PF00115 Cytochrome C and Quinol oxidase polypeptide I ISU54_RS14900 PF00510 Cytochrome c oxidase subunit III ISU54_RS14905 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ISU54_RS14910 PF01040 UbiA prenyltransferase family ISU54_RS14915 PF07690 Major Facilitator Superfamily ISU54_RS14920 PF04461 Protein of unknown function (DUF520) ISU54_RS14925 PF02558 Ketopantoate reductase PanE/ApbA ISU54_RS14925 PF08546 Ketopantoate reductase PanE/ApbA C terminal ISU54_RS14930 PF01965 DJ-1/PfpI family ISU54_RS14935 PF02568 Thiamine biosynthesis protein (ThiI) ISU54_RS14935 PF02926 THUMP domain ISU54_RS14940 PF02609 Exonuclease VII small subunit ISU54_RS14945 PF00348 Polyprenyl synthetase ISU54_RS14950 PF02780 Transketolase, C-terminal domain ISU54_RS14950 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ISU54_RS14950 PF02779 Transketolase, pyrimidine binding domain ISU54_RS14955 PF01797 Transposase IS200 like ISU54_RS14960 PF01695 IstB-like ATP binding protein ISU54_RS14965 PF00665 Integrase core domain ISU54_RS14965 PF02796 Helix-turn-helix domain of resolvase ISU54_RS14970 PF04608 Phosphatidylglycerophosphatase A ISU54_RS14975 PF00586 AIR synthase related protein, N-terminal domain ISU54_RS14975 PF02769 AIR synthase related protein, C-terminal domain ISU54_RS14980 PF01029 NusB family ISU54_RS14985 PF00885 6,7-dimethyl-8-ribityllumazine synthase ISU54_RS14990 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ISU54_RS14990 PF01872 RibD C-terminal domain ISU54_RS14995 PF03477 ATP cone domain ISU54_RS15010 PF01797 Transposase IS200 like ISU54_RS15015 PF02355 Protein export membrane protein ISU54_RS15015 PF07549 SecD/SecF GG Motif ISU54_RS15020 PF07549 SecD/SecF GG Motif ISU54_RS15020 PF02355 Protein export membrane protein ISU54_RS15020 PF13721 SecD export protein N-terminal TM region ISU54_RS15025 PF02699 Preprotein translocase subunit ISU54_RS15030 PF01702 Queuine tRNA-ribosyltransferase ISU54_RS15035 PF02547 Queuosine biosynthesis protein ISU54_RS15040 PF04336 Acyl carrier protein phosphodiesterase ISU54_RS15045 PF10417 C-terminal domain of 1-Cys peroxiredoxin ISU54_RS15045 PF00578 AhpC/TSA family ISU54_RS15065 PF02903 Alpha amylase, N-terminal ig-like domain ISU54_RS15065 PF00128 Alpha amylase, catalytic domain ISU54_RS15070 PF00324 Amino acid permease ISU54_RS15075 PF05525 Branched-chain amino acid transport protein ISU54_RS15080 PF12849 PBP superfamily domain ISU54_RS15085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU54_RS15085 PF11808 Phosphate regulon sensor protein PhoR ISU54_RS15085 PF00512 His Kinase A (phospho-acceptor) domain ISU54_RS15085 PF00989 PAS fold ISU54_RS15090 PF00072 Response regulator receiver domain ISU54_RS15090 PF00486 Transcriptional regulatory protein, C terminal ISU54_RS15095 PF12320 Type 5 capsule protein repressor C-terminal domain ISU54_RS15095 PF00149 Calcineurin-like phosphoesterase ISU54_RS15100 PF13476 AAA domain ISU54_RS15105 PF00480 ROK family ISU54_RS15110 PF04381 Putative exonuclease, RdgC ISU54_RS15115 PF06865 Pyrimidine/purine nucleoside phosphorylase ISU54_RS15120 PF01202 Shikimate kinase ISU54_RS15130 PF08241 Methyltransferase domain ISU54_RS15140 PF07317 Flagellar regulator YcgR ISU54_RS15140 PF07238 PilZ domain ISU54_RS15145 PF00171 Aldehyde dehydrogenase family ISU54_RS15150 PF00696 Amino acid kinase family ISU54_RS15150 PF01472 PUA domain ISU54_RS15155 PF07417 Sigma factor-binding transcriptional regulator Crl ISU54_RS15160 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) ISU54_RS15165 PF00156 Phosphoribosyl transferase domain ISU54_RS15180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU54_RS15180 PF03466 LysR substrate binding domain ISU54_RS15185 PF07687 Peptidase dimerisation domain ISU54_RS15185 PF01546 Peptidase family M20/M25/M40 ISU54_RS15190 PF11799 impB/mucB/samB family C-terminal domain ISU54_RS15190 PF00817 impB/mucB/samB family ISU54_RS15190 PF11798 IMS family HHH motif ISU54_RS15195 PF03009 Glycerophosphoryl diester phosphodiesterase family ISU54_RS15205 PF02424 ApbE family ISU54_RS15210 PF00111 2Fe-2S iron-sulfur cluster binding domain ISU54_RS15210 PF00970 Oxidoreductase FAD-binding domain ISU54_RS15210 PF00175 Oxidoreductase NAD-binding domain ISU54_RS15215 PF02508 Rnf-Nqr subunit, membrane protein ISU54_RS15220 PF02508 Rnf-Nqr subunit, membrane protein ISU54_RS15225 PF04205 FMN-binding domain ISU54_RS15230 PF03116 NQR2, RnfD, RnfE family ISU54_RS15235 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) ISU54_RS15235 PF11973 NQRA C-terminal domain ISU54_RS15240 PF03734 L,D-transpeptidase catalytic domain ISU54_RS15245 PF13230 Glutamine amidotransferases class-II ISU54_RS15250 PF13580 SIS domain ISU54_RS15255 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ISU54_RS15255 PF09317 Domain of unknown function (DUF1974) ISU54_RS15255 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ISU54_RS15265 PF18071 HMW1C N-terminal ISU54_RS15265 PF18254 HMW1 domain 2 ISU54_RS15270 PF05860 haemagglutination activity domain ISU54_RS15275 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB ISU54_RS15275 PF08479 POTRA domain, ShlB-type ISU54_RS15285 PF07687 Peptidase dimerisation domain ISU54_RS15285 PF01546 Peptidase family M20/M25/M40 ISU54_RS15290 PF00266 Aminotransferase class-V ISU54_RS15295 PF00665 Integrase core domain ISU54_RS15295 PF02796 Helix-turn-helix domain of resolvase ISU54_RS15300 PF01695 IstB-like ATP binding protein ISU54_RS15305 PF00266 Aminotransferase class-V ISU54_RS15310 PF00005 ABC transporter ISU54_RS15315 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS15320 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS15325 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU54_RS15340 PF01425 Amidase ISU54_RS15350 PF07690 Major Facilitator Superfamily ISU54_RS15355 PF03591 AzlC protein ISU54_RS15360 PF05437 Branched-chain amino acid transport protein (AzlD) ISU54_RS15365 PF01047 MarR family ISU54_RS15370 PF00529 HlyD membrane-fusion protein of T1SS ISU54_RS15370 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU54_RS15375 PF07690 Major Facilitator Superfamily ISU54_RS15380 PF08032 RNA 2'-O ribose methyltransferase substrate binding ISU54_RS15380 PF00588 SpoU rRNA Methylase family ISU54_RS15385 PF00085 Thioredoxin ISU54_RS15390 PF03942 DTW domain ISU54_RS15395 PF00583 Acetyltransferase (GNAT) family ISU54_RS15395 PF13380 CoA binding domain ISU54_RS15395 PF13607 Succinyl-CoA ligase like flavodoxin domain ISU54_RS15400 PF13091 PLD-like domain ISU54_RS15405 PF10043 Predicted periplasmic lipoprotein (DUF2279) ISU54_RS15435 PF10431 C-terminal, D2-small domain, of ClpB protein ISU54_RS15435 PF00004 ATPase family associated with various cellular activities (AAA) ISU54_RS15435 PF07724 AAA domain (Cdc48 subfamily) ISU54_RS15435 PF02861 Clp amino terminal domain, pathogenicity island component ISU54_RS15435 PF17871 AAA lid domain ISU54_RS15440 PF02578 Multi-copper polyphenol oxidoreductase laccase ISU54_RS15445 PF00849 RNA pseudouridylate synthase ISU54_RS15445 PF01479 S4 domain ISU54_RS15450 PF13525 Outer membrane lipoprotein ISU54_RS15455 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ISU54_RS15460 PF01797 Transposase IS200 like ISU54_RS15470 PF02796 Helix-turn-helix domain of resolvase ISU54_RS15470 PF00665 Integrase core domain ISU54_RS15475 PF01695 IstB-like ATP binding protein ISU54_RS15485 PF02153 Prephenate dehydrogenase ISU54_RS15485 PF01817 Chorismate mutase type II ISU54_RS15490 PF00793 DAHP synthetase I family ISU54_RS15495 PF00072 Response regulator receiver domain ISU54_RS15495 PF04397 LytTr DNA-binding domain ISU54_RS15505 PF04338 Protein of unknown function, DUF481 ISU54_RS15510 PF01797 Transposase IS200 like ISU54_RS15515 PF01245 Ribosomal protein L19 ISU54_RS15520 PF01746 tRNA (Guanine-1)-methyltransferase ISU54_RS15525 PF05239 PRC-barrel domain ISU54_RS15525 PF01782 RimM N-terminal domain ISU54_RS15530 PF00886 Ribosomal protein S16 ISU54_RS15535 PF02881 SRP54-type protein, helical bundle domain ISU54_RS15535 PF02978 Signal peptide binding domain ISU54_RS15535 PF00448 SRP54-type protein, GTPase domain ISU54_RS15540 PF01578 Cytochrome C assembly protein ISU54_RS15545 PF03471 Transporter associated domain ISU54_RS15545 PF01595 Cyclin M transmembrane N-terminal domain ISU54_RS15545 PF00571 CBS domain ISU54_RS15550 PF01797 Transposase IS200 like ISU54_RS15555 PF02664 S-Ribosylhomocysteinase (LuxS) ISU54_RS15560 PF04262 Glutamate-cysteine ligase ISU54_RS15565 PF09335 SNARE associated Golgi protein ISU54_RS15570 PF13419 Haloacid dehalogenase-like hydrolase ISU54_RS15600 PF02599 Global regulator protein family ISU54_RS15605 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ISU54_RS15605 PF01411 tRNA synthetases class II (A) ISU54_RS15605 PF02272 DHHA1 domain ISU54_RS15610 PF02631 RecX family ISU54_RS15615 PF00154 recA bacterial DNA recombination protein ISU54_RS15620 PF02464 Competence-damaged protein ISU54_RS15625 PF07690 Major Facilitator Superfamily ISU54_RS15640 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU54_RS15640 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU54_RS15645 PF02780 Transketolase, C-terminal domain ISU54_RS15645 PF02779 Transketolase, pyrimidine binding domain ISU54_RS15650 PF00456 Transketolase, thiamine diphosphate binding domain ISU54_RS15655 PF02653 Branched-chain amino acid transport system / permease component ISU54_RS15660 PF00005 ABC transporter ISU54_RS15670 PF13407 Periplasmic binding protein domain ISU54_RS15675 PF00141 Peroxidase ISU54_RS15680 PF07361 Cytochrome b562 ISU54_RS15685 PF01292 Prokaryotic cytochrome b561 ISU54_RS15690 PF02613 Nitrate reductase delta subunit ISU54_RS15695 PF04976 DMSO reductase anchor subunit (DmsC) ISU54_RS15700 PF12800 4Fe-4S binding domain ISU54_RS15700 PF13247 4Fe-4S dicluster domain ISU54_RS15705 PF01568 Molydopterin dinucleotide binding domain ISU54_RS15705 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ISU54_RS15705 PF00384 Molybdopterin oxidoreductase ISU54_RS15710 PF00596 Class II Aldolase and Adducin N-terminal domain ISU54_RS15715 PF08220 DeoR-like helix-turn-helix domain ISU54_RS15715 PF00455 DeoR C terminal sensor domain ISU54_RS15725 PF01797 Transposase IS200 like ISU54_RS15730 PF00005 ABC transporter ISU54_RS15735 PF02653 Branched-chain amino acid transport system / permease component ISU54_RS15740 PF02653 Branched-chain amino acid transport system / permease component ISU54_RS15745 PF01261 Xylose isomerase-like TIM barrel ISU54_RS15750 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU54_RS15750 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU54_RS15755 PF05681 Fumarate hydratase (Fumerase) ISU54_RS15755 PF05683 Fumarase C-terminus ISU54_RS15765 PF00557 Metallopeptidase family M24 ISU54_RS15775 PF00593 TonB dependent receptor ISU54_RS15775 PF07715 TonB-dependent Receptor Plug Domain ISU54_RS15785 PF03150 Di-haem cytochrome c peroxidase ISU54_RS15785 PF14376 Haem-binding domain ISU54_RS15785 PF00034 Cytochrome c ISU54_RS15790 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU54_RS15805 PF01022 Bacterial regulatory protein, arsR family ISU54_RS15810 PF02040 Arsenical pump membrane protein ISU54_RS15815 PF04198 Putative sugar-binding domain ISU54_RS15815 PF13936 Helix-turn-helix domain ISU54_RS15820 PF02734 DAK2 domain ISU54_RS15825 PF02733 Dak1 domain ISU54_RS15835 PF00107 Zinc-binding dehydrogenase ISU54_RS15835 PF08240 Alcohol dehydrogenase GroES-like domain ISU54_RS15840 PF02502 Ribose/Galactose Isomerase ISU54_RS15845 PF05192 MutS domain III ISU54_RS15845 PF01624 MutS domain I ISU54_RS15845 PF05188 MutS domain II ISU54_RS15845 PF05190 MutS family domain IV ISU54_RS15845 PF00488 MutS domain V ISU54_RS15850 PF00140 Sigma-70 factor, region 1.2 ISU54_RS15850 PF04542 Sigma-70 region 2 ISU54_RS15850 PF04539 Sigma-70 region 3 ISU54_RS15850 PF04545 Sigma-70, region 4 ISU54_RS15855 PF01476 LysM domain ISU54_RS15855 PF01551 Peptidase family M23 ISU54_RS15865 PF01975 Survival protein SurE ISU54_RS15870 PF01142 tRNA pseudouridine synthase D (TruD) ISU54_RS15875 PF02542 YgbB family ISU54_RS15880 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ISU54_RS15885 PF04977 Septum formation initiator ISU54_RS15890 PF12084 Protein of unknown function (DUF3561) ISU54_RS15900 PF00009 Elongation factor Tu GTP binding domain ISU54_RS15905 PF01507 Phosphoadenosine phosphosulfate reductase family ISU54_RS15940 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ISU54_RS15940 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ISU54_RS15945 PF00175 Oxidoreductase NAD-binding domain ISU54_RS15945 PF00258 Flavodoxin ISU54_RS15945 PF00667 FAD binding domain ISU54_RS15950 PF01242 6-pyruvoyl tetrahydropterin synthase ISU54_RS15955 PF04055 Radical SAM superfamily ISU54_RS15960 PF00080 Copper/zinc superoxide dismutase (SODC) ISU54_RS15965 PF00113 Enolase, C-terminal TIM barrel domain ISU54_RS15965 PF03952 Enolase, N-terminal domain ISU54_RS15970 PF00117 Glutamine amidotransferase class-I ISU54_RS15970 PF06418 CTP synthase N-terminus ISU54_RS15975 PF03819 MazG nucleotide pyrophosphohydrolase domain ISU54_RS15980 PF02824 TGS domain ISU54_RS15980 PF04607 Region found in RelA / SpoT proteins ISU54_RS15980 PF13291 ACT domain ISU54_RS15985 PF05958 tRNA (Uracil-5-)-methyltransferase ISU54_RS15985 PF01938 TRAM domain ISU54_RS15995 PF00072 Response regulator receiver domain ISU54_RS15995 PF01627 Hpt domain ISU54_RS15995 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ISU54_RS15995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU54_RS15995 PF00672 HAMP domain ISU54_RS15995 PF00512 His Kinase A (phospho-acceptor) domain ISU54_RS16000 PF00595 PDZ domain ISU54_RS16005 PF01966 HD domain ISU54_RS16005 PF13286 Phosphohydrolase-associated domain ISU54_RS16010 PF01048 Phosphorylase superfamily ISU54_RS16015 PF01497 Periplasmic binding protein ISU54_RS16020 PF03458 UPF0126 domain ISU54_RS16025 PF01521 Iron-sulphur cluster biosynthesis ISU54_RS16030 PF00654 Voltage gated chloride channel ISU54_RS16035 PF00202 Aminotransferase class-III ISU54_RS16040 PF01032 FecCD transport family ISU54_RS16045 PF01497 Periplasmic binding protein ISU54_RS16050 PF00005 ABC transporter ISU54_RS16055 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal ISU54_RS16055 PF00912 Transglycosylase ISU54_RS16055 PF00905 Penicillin binding protein transpeptidase domain ISU54_RS16055 PF14814 Bifunctional transglycosylase second domain ISU54_RS16060 PF04408 Helicase associated domain (HA2) ISU54_RS16060 PF00271 Helicase conserved C-terminal domain ISU54_RS16060 PF00270 DEAD/DEAH box helicase ISU54_RS16060 PF08482 ATP-dependent helicase C-terminal ISU54_RS16065 PF02834 LigT like Phosphoesterase ISU54_RS16070 PF03749 Sugar fermentation stimulation protein RE domain ISU54_RS16070 PF17746 SfsA N-terminal OB domain ISU54_RS16075 PF01258 Prokaryotic dksA/traR C4-type zinc finger ISU54_RS16080 PF00749 tRNA synthetases class I (E and Q), catalytic domain ISU54_RS16085 PF01743 Poly A polymerase head domain ISU54_RS16085 PF12626 Polymerase A arginine-rich C-terminus ISU54_RS16085 PF12627 Probable RNA and SrmB- binding site of polymerase A ISU54_RS16090 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ISU54_RS16095 PF02548 Ketopantoate hydroxymethyltransferase ISU54_RS16100 PF02569 Pantoate-beta-alanine ligase ISU54_RS16105 PF02261 Aspartate decarboxylase ISU54_RS16115 PF01061 ABC-2 type transporter ISU54_RS16120 PF00005 ABC transporter ISU54_RS16125 PF00484 Carbonic anhydrase ISU54_RS16130 PF00156 Phosphoribosyl transferase domain ISU54_RS16135 PF07731 Multicopper oxidase ISU54_RS16135 PF10518 TAT (twin-arginine translocation) pathway signal sequence ISU54_RS16135 PF07732 Multicopper oxidase ISU54_RS16135 PF00394 Multicopper oxidase ISU54_RS16140 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) ISU54_RS16145 PF17284 Spermidine synthase tetramerisation domain ISU54_RS16150 PF02675 S-adenosylmethionine decarboxylase ISU54_RS16155 PF00892 EamA-like transporter family ISU54_RS16160 PF06062 Uncharacterised protein family (UPF0231) ISU54_RS16165 PF11791 Aconitate B N-terminal domain ISU54_RS16165 PF00330 Aconitase family (aconitate hydratase) ISU54_RS16165 PF06434 Aconitate hydratase 2 N-terminus ISU54_RS16170 PF01797 Transposase IS200 like ISU54_RS16175 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISU54_RS16175 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU54_RS16180 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ISU54_RS16180 PF02817 e3 binding domain ISU54_RS16180 PF00364 Biotin-requiring enzyme ISU54_RS16185 PF00456 Transketolase, thiamine diphosphate binding domain ISU54_RS16185 PF17831 Pyruvate dehydrogenase E1 component middle domain ISU54_RS16190 PF00392 Bacterial regulatory proteins, gntR family ISU54_RS16190 PF07729 FCD domain ISU54_RS16195 PF00324 Amino acid permease ISU54_RS16200 PF17113 Regulatory signalling modulator protein AmpE ISU54_RS16205 PF01510 N-acetylmuramoyl-L-alanine amidase ISU54_RS16210 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ISU54_RS16210 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ISU54_RS16215 PF07963 Prokaryotic N-terminal methylation motif ISU54_RS16220 PF00437 Type II/IV secretion system protein ISU54_RS16220 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ISU54_RS16225 PF00482 Type II secretion system (T2SS), protein F ISU54_RS16230 PF00478 IMP dehydrogenase / GMP reductase domain ISU54_RS16235 PF01121 Dephospho-CoA kinase ISU54_RS16240 PF07072 Cell division protein ISU54_RS16245 PF03884 DNA gyrase inhibitor YacG ISU54_RS16250 PF01797 Transposase IS200 like ISU54_RS16255 PF00665 Integrase core domain ISU54_RS16255 PF02796 Helix-turn-helix domain of resolvase ISU54_RS16260 PF01695 IstB-like ATP binding protein ISU54_RS16265 PF08676 MutL C terminal dimerisation domain ISU54_RS16265 PF01119 DNA mismatch repair protein, C-terminal domain ISU54_RS16275 PF13356 Arm DNA-binding domain ISU54_RS16275 PF00589 Phage integrase family ISU54_RS16285 PF03739 Lipopolysaccharide export system permease LptF/LptG ISU54_RS16290 PF03739 Lipopolysaccharide export system permease LptF/LptG ISU54_RS16295 PF02789 Cytosol aminopeptidase family, N-terminal domain ISU54_RS16295 PF00883 Cytosol aminopeptidase family, catalytic domain ISU54_RS16300 PF04364 DNA polymerase III chi subunit, HolC ISU54_RS16305 PF08264 Anticodon-binding domain of tRNA ISU54_RS16305 PF00133 tRNA synthetases class I (I, L, M and V) ISU54_RS16305 PF10458 Valyl tRNA synthetase tRNA binding arm ISU54_RS16310 PF00583 Acetyltransferase (GNAT) family ISU54_RS16315 PF06877 Regulator of ribonuclease activity B ISU54_RS16320 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ISU54_RS16320 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ISU54_RS16325 PF04074 YhcH/YjgK/YiaL ISU54_RS16335 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS16340 PF12911 N-terminal TM domain of oligopeptide transport permease C ISU54_RS16340 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS16345 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU54_RS16345 PF00005 ABC transporter ISU54_RS16350 PF00005 ABC transporter ISU54_RS16350 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ISU54_RS16355 PF03477 ATP cone domain ISU54_RS16355 PF13597 Anaerobic ribonucleoside-triphosphate reductase ISU54_RS16365 PF07702 UTRA domain ISU54_RS16365 PF00392 Bacterial regulatory proteins, gntR family ISU54_RS16370 PF06754 Phosphonate metabolism protein PhnG ISU54_RS16375 PF05845 Bacterial phosphonate metabolism protein (PhnH) ISU54_RS16380 PF05861 Bacterial phosphonate metabolism protein (PhnI) ISU54_RS16385 PF06007 Phosphonate metabolism protein PhnJ ISU54_RS16390 PF00005 ABC transporter ISU54_RS16395 PF00005 ABC transporter ISU54_RS16400 PF07969 Amidohydrolase family ISU54_RS16410 PF12706 Beta-lactamase superfamily domain ISU54_RS16415 PF13460 NAD(P)H-binding ISU54_RS16430 PF03459 TOBE domain ISU54_RS16430 PF00005 ABC transporter ISU54_RS16430 PF17912 MalK OB fold domain ISU54_RS16435 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS16440 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS16445 PF13416 Bacterial extracellular solute-binding protein ISU54_RS16460 PF01541 GIY-YIG catalytic domain ISU54_RS16465 PF13508 Acetyltransferase (GNAT) domain ISU54_RS16470 PF02036 SCP-2 sterol transfer family ISU54_RS16475 PF01136 Peptidase family U32 ISU54_RS16480 PF01136 Peptidase family U32 ISU54_RS16485 PF08139 Prokaryotic membrane lipoprotein lipid attachment site ISU54_RS16485 PF02321 Outer membrane efflux protein ISU54_RS16490 PF00873 AcrB/AcrD/AcrF family ISU54_RS16495 PF00529 HlyD membrane-fusion protein of T1SS ISU54_RS16495 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU54_RS16500 PF00296 Luciferase-like monooxygenase ISU54_RS16510 PF01381 Helix-turn-helix ISU54_RS16520 PF12343 Cold shock protein DEAD box A ISU54_RS16520 PF00271 Helicase conserved C-terminal domain ISU54_RS16520 PF00270 DEAD/DEAH box helicase ISU54_RS16520 PF03880 DbpA RNA binding domain ISU54_RS16530 PF13181 Tetratricopeptide repeat ISU54_RS16530 PF07719 Tetratricopeptide repeat ISU54_RS16535 PF01138 3' exoribonuclease family, domain 1 ISU54_RS16535 PF00013 KH domain ISU54_RS16535 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ISU54_RS16535 PF03725 3' exoribonuclease family, domain 2 ISU54_RS16535 PF00575 S1 RNA binding domain ISU54_RS16545 PF00312 Ribosomal protein S15 ISU54_RS16550 PF16198 tRNA pseudouridylate synthase B C-terminal domain ISU54_RS16550 PF09157 Pseudouridine synthase II TruB, C-terminal ISU54_RS16550 PF01509 TruB family pseudouridylate synthase (N terminal domain) ISU54_RS16555 PF02033 Ribosome-binding factor A ISU54_RS16560 PF03144 Elongation factor Tu domain 2 ISU54_RS16560 PF11987 Translation-initiation factor 2 ISU54_RS16560 PF08364 Bacterial translation initiation factor IF-2 associated region ISU54_RS16560 PF04760 Translation initiation factor IF-2, N-terminal region ISU54_RS16560 PF00009 Elongation factor Tu GTP binding domain ISU54_RS16565 PF00575 S1 RNA binding domain ISU54_RS16565 PF08529 NusA N-terminal domain ISU54_RS16565 PF13184 NusA-like KH domain ISU54_RS16570 PF17384 RimP C-terminal SH3 domain ISU54_RS16570 PF02576 RimP N-terminal domain ISU54_RS16585 PF03840 Preprotein translocase SecG subunit ISU54_RS16590 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ISU54_RS16590 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ISU54_RS16590 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ISU54_RS16590 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ISU54_RS16595 PF00809 Pterin binding enzyme ISU54_RS16600 PF17862 AAA+ lid domain ISU54_RS16600 PF00004 ATPase family associated with various cellular activities (AAA) ISU54_RS16600 PF01434 Peptidase family M41 ISU54_RS16600 PF06480 FtsH Extracellular ISU54_RS16605 PF01728 FtsJ-like methyltransferase ISU54_RS16610 PF01985 CRS1 / YhbY (CRM) domain ISU54_RS16615 PF01272 Transcription elongation factor, GreA/GreB, C-term ISU54_RS16615 PF03449 Transcription elongation factor, N-terminal ISU54_RS16620 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family ISU54_RS16625 PF00486 Transcriptional regulatory protein, C terminal ISU54_RS16625 PF00072 Response regulator receiver domain ISU54_RS16630 PF00672 HAMP domain ISU54_RS16630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU54_RS16630 PF00512 His Kinase A (phospho-acceptor) domain ISU54_RS16635 PF01926 50S ribosome-binding GTPase ISU54_RS16635 PF01018 GTP1/OBG ISU54_RS16640 PF00892 EamA-like transporter family ISU54_RS16645 PF01016 Ribosomal L27 protein ISU54_RS16650 PF00829 Ribosomal prokaryotic L21 protein ISU54_RS16655 PF00348 Polyprenyl synthetase ISU54_RS16665 PF13693 Winged helix-turn-helix DNA-binding ISU54_RS16670 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ISU54_RS16670 PF00056 lactate/malate dehydrogenase, NAD binding domain ISU54_RS16675 PF01316 Arginine repressor, DNA binding domain ISU54_RS16675 PF02863 Arginine repressor, C-terminal domain ISU54_RS16685 PF02875 Mur ligase family, glutamate ligase domain ISU54_RS16685 PF01225 Mur ligase family, catalytic domain ISU54_RS16685 PF08245 Mur ligase middle domain ISU54_RS16690 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ISU54_RS16695 PF00719 Inorganic pyrophosphatase ISU54_RS16700 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like ISU54_RS16705 PF04357 TamB, inner membrane protein subunit of TAM complex ISU54_RS16710 PF17243 POTRA domain TamA domain 1 ISU54_RS16710 PF01103 Surface antigen ISU54_RS16710 PF07244 Surface antigen variable number repeat ISU54_RS16715 PF01625 Peptide methionine sulfoxide reductase ISU54_RS16720 PF01595 Cyclin M transmembrane N-terminal domain ISU54_RS16720 PF03471 Transporter associated domain ISU54_RS16720 PF00571 CBS domain ISU54_RS16725 PF06526 Protein of unknown function (DUF1107) ISU54_RS16730 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) ISU54_RS16735 PF00459 Inositol monophosphatase family ISU54_RS16740 PF02872 5'-nucleotidase, C-terminal domain ISU54_RS16740 PF00149 Calcineurin-like phosphoesterase ISU54_RS16745 PF04405 Domain of Unknown function (DUF542) ISU54_RS16745 PF01814 Hemerythrin HHE cation binding domain ISU54_RS16750 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ISU54_RS16750 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ISU54_RS16755 PF04225 Opacity-associated protein A LysM-like domain ISU54_RS16755 PF08525 Opacity-associated protein A N-terminal motif ISU54_RS16765 PF01797 Transposase IS200 like ISU54_RS16770 PF01281 Ribosomal protein L9, N-terminal domain ISU54_RS16770 PF03948 Ribosomal protein L9, C-terminal domain ISU54_RS16775 PF01084 Ribosomal protein S18 ISU54_RS16780 PF00436 Single-strand binding protein family ISU54_RS16785 PF01250 Ribosomal protein S6 ISU54_RS16790 PF00326 Prolyl oligopeptidase family ISU54_RS16795 PF00665 Integrase core domain ISU54_RS16795 PF02796 Helix-turn-helix domain of resolvase ISU54_RS16800 PF01695 IstB-like ATP binding protein ISU54_RS16810 PF07338 Protein of unknown function (DUF1471) ISU54_RS16815 PF18158 Adaptive response protein AidB N-terminal domain ISU54_RS16815 PF02770 Acyl-CoA dehydrogenase, middle domain ISU54_RS16815 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ISU54_RS16820 PF08032 RNA 2'-O ribose methyltransferase substrate binding ISU54_RS16820 PF00588 SpoU rRNA Methylase family ISU54_RS16825 PF17876 Cold shock domain ISU54_RS16825 PF00575 S1 RNA binding domain ISU54_RS16825 PF08461 Ribonuclease R winged-helix domain ISU54_RS16825 PF00773 RNB domain ISU54_RS16825 PF08206 Ribonuclease B OB domain ISU54_RS16830 PF02082 Transcriptional regulator ISU54_RS16835 PF00709 Adenylosuccinate synthetase ISU54_RS16840 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) ISU54_RS16845 PF01145 SPFH domain / Band 7 family ISU54_RS16850 PF12221 Bacterial membrane protein N terminal ISU54_RS16850 PF01145 SPFH domain / Band 7 family ISU54_RS16855 PF13167 GTP-binding GTPase N-terminal ISU54_RS16855 PF01926 50S ribosome-binding GTPase ISU54_RS16855 PF16360 GTP-binding GTPase Middle Region ISU54_RS16860 PF17209 Hfq protein ISU54_RS16870 PF01119 DNA mismatch repair protein, C-terminal domain ISU54_RS16870 PF08676 MutL C terminal dimerisation domain ISU54_RS16875 PF01520 N-acetylmuramoyl-L-alanine amidase ISU54_RS16880 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ISU54_RS16885 PF01256 Carbohydrate kinase ISU54_RS16885 PF03853 YjeF-related protein N-terminus ISU54_RS16890 PF08331 Domain of unknown function (DUF1730) ISU54_RS16905 PF00929 Exonuclease ISU54_RS16910 PF03193 RsgA GTPase ISU54_RS16915 PF02666 Phosphatidylserine decarboxylase ISU54_RS16920 PF00924 Mechanosensitive ion channel ISU54_RS16920 PF12795 Mechanosensitive ion channel porin domain ISU54_RS16920 PF12794 Mechanosensitive ion channel inner membrane domain 1 ISU54_RS16925 PF00152 tRNA synthetases class II (D, K and N) ISU54_RS16935 PF02910 Fumarate reductase flavoprotein C-term ISU54_RS16935 PF00890 FAD binding domain ISU54_RS16940 PF13183 4Fe-4S dicluster domain ISU54_RS16940 PF13085 2Fe-2S iron-sulfur cluster binding domain ISU54_RS16945 PF02300 Fumarate reductase subunit C ISU54_RS16950 PF02313 Fumarate reductase subunit D ISU54_RS16955 PF00893 Small Multidrug Resistance protein ISU54_RS16960 PF09285 Elongation factor P, C-terminal ISU54_RS16960 PF08207 Elongation factor P (EF-P) KOW-like domain ISU54_RS16960 PF01132 Elongation factor P (EF-P) OB domain ISU54_RS16965 PF04055 Radical SAM superfamily ISU54_RS16970 PF13698 Domain of unknown function (DUF4156) ISU54_RS16975 PF00118 TCP-1/cpn60 chaperonin family ISU54_RS16980 PF00166 Chaperonin 10 Kd subunit ISU54_RS16985 PF04186 FxsA cytoplasmic membrane protein ISU54_RS16990 PF00206 Lyase ISU54_RS16990 PF10415 Fumarase C C-terminus ISU54_RS16995 PF03605 Anaerobic c4-dicarboxylate membrane transporter ISU54_RS17000 PF03091 CutA1 divalent ion tolerance protein ISU54_RS17005 PF11412 Disulphide bond corrector protein DsbC ISU54_RS17005 PF02683 Cytochrome C biogenesis protein transmembrane region ISU54_RS17010 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ISU54_RS17010 PF01568 Molydopterin dinucleotide binding domain ISU54_RS17010 PF00384 Molybdopterin oxidoreductase ISU54_RS17015 PF13247 4Fe-4S dicluster domain ISU54_RS17015 PF12800 4Fe-4S binding domain ISU54_RS17020 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU54_RS17020 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ISU54_RS17020 PF13247 4Fe-4S dicluster domain ISU54_RS17050 PF06379 L-rhamnose-proton symport protein (RhaT) ISU54_RS17055 PF02311 AraC-like ligand binding domain ISU54_RS17055 PF12833 Helix-turn-helix domain ISU54_RS17060 PF02311 AraC-like ligand binding domain ISU54_RS17060 PF12833 Helix-turn-helix domain ISU54_RS17070 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU54_RS17070 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU54_RS17075 PF06134 L-rhamnose isomerase (RhaA) ISU54_RS17080 PF00596 Class II Aldolase and Adducin N-terminal domain ISU54_RS17085 PF00465 Iron-containing alcohol dehydrogenase ISU54_RS17090 PF05336 L-rhamnose mutarotase ISU54_RS17095 PF00436 Single-strand binding protein family ISU54_RS17100 PF00005 ABC transporter ISU54_RS17100 PF17760 UvrA interaction domain ISU54_RS17100 PF17755 UvrA DNA-binding domain ISU54_RS17105 PF04237 YjbR ISU54_RS17110 PF00155 Aminotransferase class I and II ISU54_RS17115 PF00842 Alanine racemase, C-terminal domain ISU54_RS17115 PF01168 Alanine racemase, N-terminal domain ISU54_RS17120 PF00772 DnaB-like helicase N terminal domain ISU54_RS17120 PF03796 DnaB-like helicase C terminal domain ISU54_RS17125 PF00107 Zinc-binding dehydrogenase ISU54_RS17125 PF08240 Alcohol dehydrogenase GroES-like domain ISU54_RS17130 PF09583 Phage shock protein G (Phageshock_PspG) ISU54_RS17135 PF01207 Dihydrouridine synthase (Dus) ISU54_RS17140 PF01475 Ferric uptake regulator family ISU54_RS17145 PF01726 LexA DNA binding domain ISU54_RS17145 PF00717 Peptidase S24-like ISU54_RS17150 PF01219 Prokaryotic diacylglycerol kinase ISU54_RS17155 PF01553 Acyltransferase ISU54_RS17160 PF01040 UbiA prenyltransferase family ISU54_RS17165 PF04345 Chorismate lyase ISU54_RS17170 PF12951 Passenger-associated-transport-repeat ISU54_RS17175 PF01565 FAD binding domain ISU54_RS17175 PF08031 Berberine and berberine like ISU54_RS17190 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU54_RS17195 PF13953 PapC C-terminal domain ISU54_RS17195 PF13954 PapC N-terminal domain ISU54_RS17195 PF00577 Outer membrane usher protein ISU54_RS17205 PF02342 TerD domain ISU54_RS17210 PF02342 TerD domain ISU54_RS17215 PF03741 Integral membrane protein TerC family ISU54_RS17220 PF05099 Tellurite resistance protein TerB ISU54_RS17225 PF02342 TerD domain ISU54_RS17230 PF02342 TerD domain ISU54_RS17250 PF11202 Phosphoribosyl transferase (PRTase) ISU54_RS17250 PF15608 PELOTA RNA binding domain ISU54_RS17270 PF04055 Radical SAM superfamily ISU54_RS17275 PF06228 Haem utilisation ChuX/HutX ISU54_RS17280 PF13460 NAD(P)H-binding ISU54_RS17290 PF07715 TonB-dependent Receptor Plug Domain ISU54_RS17290 PF00593 TonB dependent receptor ISU54_RS17295 PF05171 Haemin-degrading HemS.ChuX domain ISU54_RS17300 PF01497 Periplasmic binding protein ISU54_RS17305 PF01032 FecCD transport family ISU54_RS17310 PF00005 ABC transporter ISU54_RS17315 PF01053 Cys/Met metabolism PLP-dependent enzyme ISU54_RS17320 PF03222 Tryptophan/tyrosine permease family ISU54_RS17325 PF03466 LysR substrate binding domain ISU54_RS17325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU54_RS17330 PF01206 Sulfurtransferase TusA ISU54_RS17335 PF04143 Sulphur transport ISU54_RS17340 PF01312 FlhB HrpN YscU SpaS Family ISU54_RS17345 PF01311 Bacterial export proteins, family 1 ISU54_RS17350 PF01313 Bacterial export proteins, family 3 ISU54_RS17355 PF00813 FliP family ISU54_RS17360 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ISU54_RS17375 PF18269 T3SS EscN ATPase C-terminal domain ISU54_RS17375 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU54_RS17380 PF00771 FHIPEP family ISU54_RS17430 PF00263 Bacterial type II and III secretion system protein ISU54_RS17430 PF03958 Bacterial type II/III secretion system short domain ISU54_RS17435 PF00672 HAMP domain ISU54_RS17435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU54_RS17435 PF00512 His Kinase A (phospho-acceptor) domain ISU54_RS17435 PF01627 Hpt domain ISU54_RS17435 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ISU54_RS17435 PF00072 Response regulator receiver domain ISU54_RS17440 PF00196 Bacterial regulatory proteins, luxR family ISU54_RS17440 PF00072 Response regulator receiver domain ISU54_RS17445 PF00375 Sodium:dicarboxylate symporter family ISU54_RS17450 PF00501 AMP-binding enzyme ISU54_RS17450 PF16177 Acetyl-coenzyme A synthetase N-terminus ISU54_RS17450 PF13193 AMP-binding enzyme C-terminal domain ISU54_RS17455 PF04341 Protein of unknown function, DUF485 ISU54_RS17460 PF00474 Sodium:solute symporter family ISU54_RS17470 PF00665 Integrase core domain ISU54_RS17470 PF02796 Helix-turn-helix domain of resolvase ISU54_RS17475 PF01695 IstB-like ATP binding protein ISU54_RS17510 PF01808 AICARFT/IMPCHase bienzyme ISU54_RS17510 PF02142 MGS-like domain ISU54_RS17515 PF02844 Phosphoribosylglycinamide synthetase, N domain ISU54_RS17515 PF02843 Phosphoribosylglycinamide synthetase, C domain ISU54_RS17515 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ISU54_RS17520 PF07356 Protein of unknown function (DUF1481) ISU54_RS17525 PF00216 Bacterial DNA-binding protein ISU54_RS17530 PF04222 Protein of unknown function (DUF416) ISU54_RS17535 PF04493 Endonuclease V ISU54_RS17540 PF01208 Uroporphyrinogen decarboxylase (URO-D) ISU54_RS17550 PF00293 NUDIX domain ISU54_RS17550 PF09297 NADH pyrophosphatase zinc ribbon domain ISU54_RS17555 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ ISU54_RS17560 PF01964 Radical SAM ThiC family ISU54_RS17560 PF13667 ThiC-associated domain ISU54_RS17565 PF02581 Thiamine monophosphate synthase ISU54_RS17570 PF00899 ThiF family ISU54_RS17580 PF05690 Thiazole biosynthesis protein ThiG ISU54_RS17585 PF04055 Radical SAM superfamily ISU54_RS17585 PF06968 Biotin and Thiamin Synthesis associated domain ISU54_RS17590 PF01797 Transposase IS200 like ISU54_RS17595 PF04997 RNA polymerase Rpb1, domain 1 ISU54_RS17595 PF00623 RNA polymerase Rpb1, domain 2 ISU54_RS17595 PF04983 RNA polymerase Rpb1, domain 3 ISU54_RS17595 PF04998 RNA polymerase Rpb1, domain 5 ISU54_RS17595 PF05000 RNA polymerase Rpb1, domain 4 ISU54_RS17600 PF04563 RNA polymerase beta subunit ISU54_RS17600 PF04561 RNA polymerase Rpb2, domain 2 ISU54_RS17600 PF04565 RNA polymerase Rpb2, domain 3 ISU54_RS17600 PF00562 RNA polymerase Rpb2, domain 6 ISU54_RS17600 PF04560 RNA polymerase Rpb2, domain 7 ISU54_RS17600 PF10385 RNA polymerase beta subunit external 1 domain ISU54_RS17605 PF16320 Ribosomal protein L7/L12 dimerisation domain ISU54_RS17605 PF00542 Ribosomal protein L7/L12 C-terminal domain ISU54_RS17610 PF00466 Ribosomal protein L10 ISU54_RS17615 PF00687 Ribosomal protein L1p/L10e family ISU54_RS17620 PF00298 Ribosomal protein L11, RNA binding domain ISU54_RS17620 PF03946 Ribosomal protein L11, N-terminal domain ISU54_RS17625 PF00467 KOW motif ISU54_RS17625 PF02357 Transcription termination factor nusG ISU54_RS17630 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ISU54_RS17635 PF00009 Elongation factor Tu GTP binding domain ISU54_RS17635 PF03143 Elongation factor Tu C-terminal domain ISU54_RS17635 PF03144 Elongation factor Tu domain 2 ISU54_RS17660 PF01695 IstB-like ATP binding protein ISU54_RS17665 PF02796 Helix-turn-helix domain of resolvase ISU54_RS17665 PF00665 Integrase core domain ISU54_RS17670 PF13673 Acetyltransferase (GNAT) domain ISU54_RS17675 PF00485 Phosphoribulokinase / Uridine kinase family ISU54_RS17680 PF02237 Biotin protein ligase C terminal domain ISU54_RS17680 PF08279 HTH domain ISU54_RS17680 PF03099 Biotin/lipoate A/B protein ligase family ISU54_RS17685 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ISU54_RS17685 PF01565 FAD binding domain ISU54_RS17715 PF12724 Flavodoxin domain ISU54_RS17720 PF02386 Cation transport protein ISU54_RS17730 PF01797 Transposase IS200 like ISU54_RS17735 PF09186 Domain of unknown function (DUF1949) ISU54_RS17735 PF01205 Uncharacterized protein family UPF0029 ISU54_RS17740 PF00557 Metallopeptidase family M24 ISU54_RS17745 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ISU54_RS17745 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ISU54_RS17745 PF00378 Enoyl-CoA hydratase/isomerase ISU54_RS17750 PF02803 Thiolase, C-terminal domain ISU54_RS17750 PF00108 Thiolase, N-terminal domain ISU54_RS17755 PF00175 Oxidoreductase NAD-binding domain ISU54_RS17755 PF00970 Oxidoreductase FAD-binding domain ISU54_RS17760 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ISU54_RS17765 PF02357 Transcription termination factor nusG ISU54_RS17770 PF00490 Delta-aminolevulinic acid dehydratase ISU54_RS17775 PF01026 TatD related DNase ISU54_RS17780 PF01695 IstB-like ATP binding protein ISU54_RS17785 PF00665 Integrase core domain ISU54_RS17785 PF02796 Helix-turn-helix domain of resolvase ISU54_RS17795 PF00902 Sec-independent protein translocase protein (TatC) ISU54_RS17805 PF02416 mttA/Hcf106 family ISU54_RS17810 PF03109 ABC1 family ISU54_RS17815 PF02036 SCP-2 sterol transfer family ISU54_RS17820 PF01209 ubiE/COQ5 methyltransferase family ISU54_RS17825 PF02646 RmuC family ISU54_RS17830 PF09335 SNARE associated Golgi protein ISU54_RS17835 PF13722 5TM C-terminal transporter carbon starvation CstA ISU54_RS17835 PF02554 Carbon starvation protein CstA ISU54_RS17845 PF01048 Phosphorylase superfamily ISU54_RS17850 PF01738 Dienelactone hydrolase family ISU54_RS17855 PF01717 Cobalamin-independent synthase, Catalytic domain ISU54_RS17855 PF08267 Cobalamin-independent synthase, N-terminal domain ISU54_RS17860 PF03466 LysR substrate binding domain ISU54_RS17860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU54_RS17865 PF00892 EamA-like transporter family ISU54_RS17870 PF03547 Membrane transport protein ISU54_RS17875 PF03009 Glycerophosphoryl diester phosphodiesterase family ISU54_RS17880 PF00005 ABC transporter ISU54_RS17880 PF17912 MalK OB fold domain ISU54_RS17885 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS17890 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS17895 PF13416 Bacterial extracellular solute-binding protein ISU54_RS17935 PF00005 ABC transporter ISU54_RS17940 PF00005 ABC transporter ISU54_RS17940 PF12399 Branched-chain amino acid ATP-binding cassette transporter ISU54_RS17945 PF02653 Branched-chain amino acid transport system / permease component ISU54_RS17945 PF11862 Domain of unknown function (DUF3382) ISU54_RS17950 PF02653 Branched-chain amino acid transport system / permease component ISU54_RS17955 PF13458 Periplasmic binding protein ISU54_RS17960 PF12568 Acetyltransferase (GNAT) domain, PanZ ISU54_RS17965 PF01797 Transposase IS200 like ISU54_RS17970 PF04545 Sigma-70, region 4 ISU54_RS17970 PF04542 Sigma-70 region 2 ISU54_RS17970 PF00140 Sigma-70 factor, region 1.2 ISU54_RS17975 PF02687 FtsX-like permease family ISU54_RS17975 PF18075 FtsX extracellular domain ISU54_RS17980 PF00005 ABC transporter ISU54_RS17985 PF00448 SRP54-type protein, GTPase domain ISU54_RS17985 PF02881 SRP54-type protein, helical bundle domain ISU54_RS17985 PF02881 SRP54-type protein, helical bundle domain ISU54_RS17985 PF00448 SRP54-type protein, GTPase domain ISU54_RS17995 PF06611 Protein of unknown function (DUF1145) ISU54_RS18010 PF07947 YhhN family ISU54_RS18015 PF00403 Heavy-metal-associated domain ISU54_RS18020 PF01206 Sulfurtransferase TusA ISU54_RS18025 PF02592 Putative vitamin uptake transporter ISU54_RS18030 PF08786 DcrB ISU54_RS18035 PF13183 4Fe-4S dicluster domain ISU54_RS18035 PF02754 Cysteine-rich domain ISU54_RS18040 PF00890 FAD binding domain ISU54_RS18045 PF01266 FAD dependent oxidoreductase ISU54_RS18045 PF04324 BFD-like [2Fe-2S] binding domain ISU54_RS18050 PF03009 Glycerophosphoryl diester phosphodiesterase family ISU54_RS18065 PF12146 Serine aminopeptidase, S33 ISU54_RS18070 PF01810 LysE type translocator ISU54_RS18075 PF01810 LysE type translocator ISU54_RS18080 PF16124 RecQ zinc-binding ISU54_RS18080 PF00271 Helicase conserved C-terminal domain ISU54_RS18080 PF09382 RQC domain ISU54_RS18080 PF00270 DEAD/DEAH box helicase ISU54_RS18080 PF00570 HRDC domain ISU54_RS18085 PF02253 Phospholipase A1 ISU54_RS18090 PF03061 Thioesterase superfamily ISU54_RS18095 PF00892 EamA-like transporter family ISU54_RS18100 PF01544 CorA-like Mg2+ transporter protein ISU54_RS18105 PF09370 Phosphoenolpyruvate hydrolase-like ISU54_RS18120 PF00580 UvrD/REP helicase N-terminal domain ISU54_RS18120 PF13361 UvrD-like helicase C-terminal domain ISU54_RS18125 PF13419 Haloacid dehalogenase-like hydrolase ISU54_RS18130 PF02899 Phage integrase, N-terminal SAM-like domain ISU54_RS18130 PF00589 Phage integrase family ISU54_RS18135 PF04340 Protein of unknown function, DUF484 ISU54_RS18140 PF01678 Diaminopimelate epimerase ISU54_RS18145 PF13627 Prokaryotic lipoprotein-attachment site ISU54_RS18150 PF01491 Frataxin-like domain ISU54_RS18155 PF01295 Adenylate cyclase, class-I ISU54_RS18155 PF12633 Adenylate cyclase NT domain ISU54_RS18165 PF03900 Porphobilinogen deaminase, C-terminal domain ISU54_RS18165 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ISU54_RS18170 PF02602 Uroporphyrinogen-III synthase HemD ISU54_RS18175 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase ISU54_RS18180 PF07719 Tetratricopeptide repeat ISU54_RS18180 PF07219 HemY protein N-terminus ISU54_RS18185 PF01797 Transposase IS200 like ISU54_RS18210 PF00324 Amino acid permease ISU54_RS18215 PF03808 Glycosyl transferase WecB/TagA/CpsF family ISU54_RS18220 PF06899 WzyE protein, O-antigen assembly polymerase ISU54_RS18225 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 ISU54_RS18230 PF01943 Polysaccharide biosynthesis protein ISU54_RS18235 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ISU54_RS18245 PF00483 Nucleotidyl transferase ISU54_RS18250 PF16363 GDP-mannose 4,6 dehydratase ISU54_RS18255 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ISU54_RS18255 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ISU54_RS18255 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ISU54_RS18260 PF02350 UDP-N-acetylglucosamine 2-epimerase ISU54_RS18265 PF02706 Chain length determinant protein ISU54_RS18270 PF00953 Glycosyl transferase family 4 ISU54_RS18275 PF07497 Rho termination factor, RNA-binding domain ISU54_RS18275 PF07498 Rho termination factor, N-terminal domain ISU54_RS18275 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU54_RS18280 PF00085 Thioredoxin ISU54_RS18285 PF00270 DEAD/DEAH box helicase ISU54_RS18285 PF00271 Helicase conserved C-terminal domain ISU54_RS18295 PF13361 UvrD-like helicase C-terminal domain ISU54_RS18295 PF00580 UvrD/REP helicase N-terminal domain ISU54_RS18315 PF00872 Transposase, Mutator family ISU54_RS18325 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU54_RS18325 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU54_RS18330 PF13954 PapC N-terminal domain ISU54_RS18330 PF00577 Outer membrane usher protein ISU54_RS18330 PF13953 PapC C-terminal domain ISU54_RS18340 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ISU54_RS18340 PF02753 Pili assembly chaperone PapD, C-terminal domain ISU54_RS18345 PF01320 Colicin immunity protein / pyocin immunity protein ISU54_RS18370 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ISU54_RS18370 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ISU54_RS18375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU54_RS18375 PF03466 LysR substrate binding domain ISU54_RS18410 PF00291 Pyridoxal-phosphate dependent enzyme ISU54_RS18410 PF00585 C-terminal regulatory domain of Threonine dehydratase ISU54_RS18415 PF00920 Dehydratase family ISU54_RS18420 PF01063 Amino-transferase class IV ISU54_RS18430 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ISU54_RS18430 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ISU54_RS18430 PF00205 Thiamine pyrophosphate enzyme, central domain ISU54_RS18435 PF08046 IlvGEDA operon leader peptide ISU54_RS18440 PF13335 Magnesium chelatase, subunit ChlI C-terminal ISU54_RS18440 PF01078 Magnesium chelatase, subunit ChlI ISU54_RS18445 PF04219 Protein of unknown function, DUF ISU54_RS18450 PF03466 LysR substrate binding domain ISU54_RS18450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU54_RS18455 PF02653 Branched-chain amino acid transport system / permease component ISU54_RS18460 PF02653 Branched-chain amino acid transport system / permease component ISU54_RS18465 PF00005 ABC transporter ISU54_RS18470 PF13407 Periplasmic binding protein domain ISU54_RS18505 PF01177 Asp/Glu/Hydantoin racemase ISU54_RS18510 PF07715 TonB-dependent Receptor Plug Domain ISU54_RS18510 PF00593 TonB dependent receptor ISU54_RS18515 PF05958 tRNA (Uracil-5-)-methyltransferase ISU54_RS18520 PF07226 Protein of unknown function (DUF1422) ISU54_RS18525 PF00440 Bacterial regulatory proteins, tetR family ISU54_RS18530 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISU54_RS18530 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU54_RS18535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU54_RS18535 PF03466 LysR substrate binding domain ISU54_RS18540 PF00462 Glutaredoxin ISU54_RS18540 PF08534 Redoxin ISU54_RS18545 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ISU54_RS18545 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU54_RS18550 PF03544 Gram-negative bacterial TonB protein C-terminal ISU54_RS18555 PF00529 HlyD membrane-fusion protein of T1SS ISU54_RS18560 PF00005 ABC transporter ISU54_RS18560 PF00664 ABC transporter transmembrane region ISU54_RS18570 PF07715 TonB-dependent Receptor Plug Domain ISU54_RS18570 PF00593 TonB dependent receptor ISU54_RS18575 PF00206 Lyase ISU54_RS18575 PF14698 Argininosuccinate lyase C-terminal ISU54_RS18580 PF00696 Amino acid kinase family ISU54_RS18585 PF01118 Semialdehyde dehydrogenase, NAD binding domain ISU54_RS18585 PF02774 Semialdehyde dehydrogenase, dimerisation domain ISU54_RS18590 PF01546 Peptidase family M20/M25/M40 ISU54_RS18590 PF07687 Peptidase dimerisation domain ISU54_RS18595 PF00311 Phosphoenolpyruvate carboxylase ISU54_RS18605 PF02219 Methylenetetrahydrofolate reductase ISU54_RS18610 PF00742 Homoserine dehydrogenase ISU54_RS18610 PF03447 Homoserine dehydrogenase, NAD binding domain ISU54_RS18610 PF00696 Amino acid kinase family ISU54_RS18620 PF01340 Met Apo-repressor, MetJ ISU54_RS18625 PF05360 yiaA/B two helix domain ISU54_RS18630 PF01197 Ribosomal protein L31 ISU54_RS18635 PF18074 Primosomal protein N C-terminal domain ISU54_RS18635 PF17764 3′ DNA-binding domain (3′BD) ISU54_RS18635 PF00270 DEAD/DEAH box helicase ISU54_RS18635 PF00271 Helicase conserved C-terminal domain ISU54_RS18635 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ISU54_RS18640 PF00356 Bacterial regulatory proteins, lacI family ISU54_RS18645 PF05036 Sporulation related domain ISU54_RS18650 PF00227 Proteasome subunit ISU54_RS18655 PF00004 ATPase family associated with various cellular activities (AAA) ISU54_RS18655 PF10431 C-terminal, D2-small domain, of ClpB protein ISU54_RS18655 PF07724 AAA domain (Cdc48 subfamily) ISU54_RS18660 PF01040 UbiA prenyltransferase family ISU54_RS18665 PF03737 Aldolase/RraA ISU54_RS18680 PF00529 HlyD membrane-fusion protein of T1SS ISU54_RS18680 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU54_RS18685 PF03412 Peptidase C39 family ISU54_RS18685 PF00005 ABC transporter ISU54_RS18685 PF00664 ABC transporter transmembrane region ISU54_RS18690 PF01695 IstB-like ATP binding protein ISU54_RS18695 PF02796 Helix-turn-helix domain of resolvase ISU54_RS18695 PF00665 Integrase core domain ISU54_RS18725 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE ISU54_RS18735 PF00004 ATPase family associated with various cellular activities (AAA) ISU54_RS18735 PF07724 AAA domain (Cdc48 subfamily) ISU54_RS18735 PF17871 AAA lid domain ISU54_RS18735 PF10431 C-terminal, D2-small domain, of ClpB protein ISU54_RS18770 PF04717 Type VI secretion system, phage-baseplate injector ISU54_RS18785 PF05593 RHS Repeat ISU54_RS18785 PF03527 RHS protein ISU54_RS18815 PF04717 Type VI secretion system, phage-baseplate injector ISU54_RS18825 PF05593 RHS Repeat ISU54_RS18825 PF03527 RHS protein ISU54_RS18845 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ISU54_RS18845 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ISU54_RS18850 PF02311 AraC-like ligand binding domain ISU54_RS18850 PF12833 Helix-turn-helix domain ISU54_RS18855 PF05025 RbsD / FucU transport protein family ISU54_RS18860 PF00294 pfkB family carbohydrate kinase ISU54_RS18865 PF01791 DeoC/LacD family aldolase ISU54_RS18870 PF03358 NADPH-dependent FMN reductase ISU54_RS18875 PF09084 NMT1/THI5 like ISU54_RS18880 PF00296 Luciferase-like monooxygenase ISU54_RS18885 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS18890 PF00005 ABC transporter ISU54_RS18900 PF04221 RelB antitoxin ISU54_RS18905 PF00860 Permease family ISU54_RS18910 PF00999 Sodium/hydrogen exchanger family ISU54_RS18920 PF03279 Bacterial lipid A biosynthesis acyltransferase ISU54_RS18930 PF00005 ABC transporter ISU54_RS18935 PF02653 Branched-chain amino acid transport system / permease component ISU54_RS18945 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU54_RS18945 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU54_RS18950 PF01380 SIS domain ISU54_RS18950 PF00571 CBS domain ISU54_RS18955 PF02798 Glutathione S-transferase, N-terminal domain ISU54_RS18970 PF01797 Transposase IS200 like ISU54_RS18975 PF00313 'Cold-shock' DNA-binding domain ISU54_RS18980 PF00313 'Cold-shock' DNA-binding domain ISU54_RS18985 PF05433 Glycine zipper 2TM domain ISU54_RS18990 PF00753 Metallo-beta-lactamase superfamily ISU54_RS18995 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ISU54_RS18995 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ISU54_RS19000 PF02627 Carboxymuconolactone decarboxylase family ISU54_RS19005 PF07690 Major Facilitator Superfamily ISU54_RS19030 PF02954 Bacterial regulatory protein, Fis family ISU54_RS19035 PF01207 Dihydrouridine synthase (Dus) ISU54_RS19045 PF00474 Sodium:solute symporter family ISU54_RS19050 PF06196 Protein of unknown function (DUF997) ISU54_RS19060 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ISU54_RS19060 PF02785 Biotin carboxylase C-terminal domain ISU54_RS19060 PF00289 Biotin carboxylase, N-terminal domain ISU54_RS19065 PF00364 Biotin-requiring enzyme ISU54_RS19070 PF01220 Dehydroquinase class II ISU54_RS19075 PF01794 Ferric reductase like transmembrane component ISU54_RS19080 PF00174 Oxidoreductase molybdopterin binding domain ISU54_RS19085 PF00107 Zinc-binding dehydrogenase ISU54_RS19085 PF08240 Alcohol dehydrogenase GroES-like domain ISU54_RS19090 PF00563 EAL domain ISU54_RS19090 PF17157 Gammaproteobacterial periplasmic sensor domain ISU54_RS19090 PF00990 Diguanylate cyclase, GGDEF domain ISU54_RS19100 PF04085 rod shape-determining protein MreC ISU54_RS19105 PF04093 rod shape-determining protein MreD ISU54_RS19110 PF02545 Maf-like protein ISU54_RS19115 PF00575 S1 RNA binding domain ISU54_RS19115 PF10150 Ribonuclease E/G family ISU54_RS19120 PF13502 AsmA-like C-terminal region ISU54_RS19120 PF13116 Protein of unknown function ISU54_RS19125 PF00795 Carbon-nitrogen hydrolase ISU54_RS19130 PF01523 Putative modulator of DNA gyrase ISU54_RS19135 PF14431 YwqJ-like deaminase ISU54_RS19135 PF18807 Tripartite Tc toxins repeat ISU54_RS19140 PF18807 Tripartite Tc toxins repeat ISU54_RS19140 PF05785 Rho-activating domain of cytotoxic necrotizing factor ISU54_RS19160 PF03534 Salmonella virulence plasmid 65kDa B protein ISU54_RS19160 PF12256 Insecticide toxin TcdB middle/N-terminal region ISU54_RS19160 PF12255 Insecticide toxin TcdB middle/C-terminal region ISU54_RS19165 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain ISU54_RS19165 PF18413 Neuraminidase-like domain ISU54_RS19175 PF03466 LysR substrate binding domain ISU54_RS19175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU54_RS19180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU54_RS19180 PF03466 LysR substrate binding domain ISU54_RS19185 PF07869 Protein of unknown function (DUF1656) ISU54_RS19190 PF13533 Biotin-lipoyl like ISU54_RS19195 PF04632 Fusaric acid resistance protein family ISU54_RS19210 PF01337 Barstar (barnase inhibitor) ISU54_RS19215 PF04751 Protein of unknown function (DUF615) ISU54_RS19220 PF01523 Putative modulator of DNA gyrase ISU54_RS19230 PF07361 Cytochrome b562 ISU54_RS19235 PF14760 Rnk N-terminus ISU54_RS19235 PF01272 Transcription elongation factor, GreA/GreB, C-term ISU54_RS19240 PF00128 Alpha amylase, catalytic domain ISU54_RS19240 PF11941 Domain of unknown function (DUF3459) ISU54_RS19245 PF02378 Phosphotransferase system, EIIC ISU54_RS19245 PF00367 phosphotransferase system, EIIB ISU54_RS19250 PF00356 Bacterial regulatory proteins, lacI family ISU54_RS19260 PF01042 Endoribonuclease L-PSP ISU54_RS19265 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain ISU54_RS19265 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain ISU54_RS19270 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ISU54_RS19270 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ISU54_RS19275 PF00381 PTS HPr component phosphorylation site ISU54_RS19280 PF03668 P-loop ATPase protein family ISU54_RS19285 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ISU54_RS19295 PF04552 Sigma-54, DNA binding domain ISU54_RS19295 PF04963 Sigma-54 factor, core binding domain ISU54_RS19295 PF00309 Sigma-54 factor, Activator interacting domain (AID) ISU54_RS19300 PF12399 Branched-chain amino acid ATP-binding cassette transporter ISU54_RS19300 PF00005 ABC transporter ISU54_RS19305 PF03968 OstA-like protein ISU54_RS19310 PF06835 Lipopolysaccharide-assembly, LptC-related ISU54_RS19320 PF00571 CBS domain ISU54_RS19320 PF01380 SIS domain ISU54_RS19325 PF01699 Sodium/calcium exchanger protein ISU54_RS19330 PF00005 ABC transporter ISU54_RS19335 PF02405 Permease MlaE ISU54_RS19340 PF02470 MlaD protein ISU54_RS19345 PF05494 MlaC protein ISU54_RS19350 PF13466 STAS domain ISU54_RS19355 PF01722 BolA-like protein ISU54_RS19360 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ISU54_RS19365 PF13180 PDZ domain ISU54_RS19370 PF01797 Transposase IS200 like ISU54_RS19375 PF13180 PDZ domain ISU54_RS19375 PF00595 PDZ domain ISU54_RS19380 PF06295 Protein of unknown function (DUF1043) ISU54_RS19385 PF03969 AFG1-like ATPase ISU54_RS19390 PF00572 Ribosomal protein L13 ISU54_RS19395 PF00380 Ribosomal protein S9/S16 ISU54_RS19405 PF02798 Glutathione S-transferase, N-terminal domain ISU54_RS19405 PF00043 Glutathione S-transferase, C-terminal domain ISU54_RS19410 PF04386 Stringent starvation protein B ISU54_RS19420 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ISU54_RS19420 PF07992 Pyridine nucleotide-disulphide oxidoreductase ISU54_RS19425 PF01645 Conserved region in glutamate synthase ISU54_RS19425 PF04898 Glutamate synthase central domain ISU54_RS19425 PF01493 GXGXG motif ISU54_RS19425 PF00310 Glutamine amidotransferases class-II ISU54_RS19430 PF04055 Radical SAM superfamily ISU54_RS19430 PF16199 Radical_SAM C-terminal domain ISU54_RS19435 PF00072 Response regulator receiver domain ISU54_RS19435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU54_RS19435 PF00989 PAS fold ISU54_RS19435 PF18415 Histidine kinase receptor ArcB trans-membrane domain ISU54_RS19435 PF01627 Hpt domain ISU54_RS19435 PF00512 His Kinase A (phospho-acceptor) domain ISU54_RS19445 PF00912 Transglycosylase ISU54_RS19450 PF04972 BON domain ISU54_RS19455 PF13580 SIS domain ISU54_RS19460 PF02021 Uncharacterised protein family UPF0102 ISU54_RS19465 PF04348 LppC putative lipoprotein ISU54_RS19470 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ISU54_RS19480 PF02678 Pirin ISU54_RS19480 PF17954 Quercetinase C-terminal cupin domain ISU54_RS19485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU54_RS19485 PF03466 LysR substrate binding domain ISU54_RS19495 PF01695 IstB-like ATP binding protein ISU54_RS19500 PF00665 Integrase core domain ISU54_RS19500 PF02796 Helix-turn-helix domain of resolvase ISU54_RS19505 PF09500 Putative thioesterase (yiiD_Cterm) ISU54_RS19505 PF00583 Acetyltransferase (GNAT) family ISU54_RS19510 PF05170 AsmA family ISU54_RS19515 PF00860 Permease family ISU54_RS19520 PF03616 Sodium/glutamate symporter ISU54_RS19530 PF17191 RecG wedge domain ISU54_RS19530 PF00270 DEAD/DEAH box helicase ISU54_RS19530 PF00271 Helicase conserved C-terminal domain ISU54_RS19535 PF00588 SpoU rRNA Methylase family ISU54_RS19535 PF12105 SpoU, rRNA methylase, C-terminal ISU54_RS19540 PF13291 ACT domain ISU54_RS19540 PF04607 Region found in RelA / SpoT proteins ISU54_RS19540 PF02824 TGS domain ISU54_RS19545 PF01192 RNA polymerase Rpb6 ISU54_RS19550 PF00625 Guanylate kinase ISU54_RS19555 PF01653 NAD-dependent DNA ligase adenylation domain ISU54_RS19555 PF03120 NAD-dependent DNA ligase OB-fold domain ISU54_RS19560 PF03458 UPF0126 domain ISU54_RS19565 PF03755 YicC-like family, N-terminal region ISU54_RS19565 PF08340 Domain of unknown function (DUF1732) ISU54_RS19570 PF03725 3' exoribonuclease family, domain 2 ISU54_RS19570 PF01138 3' exoribonuclease family, domain 1 ISU54_RS19575 PF00156 Phosphoribosyl transferase domain ISU54_RS19580 PF00440 Bacterial regulatory proteins, tetR family ISU54_RS19585 PF00692 dUTPase ISU54_RS19590 PF04127 DNA / pantothenate metabolism flavoprotein ISU54_RS19590 PF02441 Flavoprotein ISU54_RS19595 PF04002 RadC-like JAB domain ISU54_RS19600 PF00830 Ribosomal L28 family ISU54_RS19605 PF00471 Ribosomal protein L33 ISU54_RS19610 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ISU54_RS19610 PF06827 Zinc finger found in FPG and IleRS ISU54_RS19610 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ISU54_RS19615 PF01467 Cytidylyltransferase-like ISU54_RS19620 PF00535 Glycosyl transferase family 2 ISU54_RS19625 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ISU54_RS19630 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ISU54_RS19635 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ISU54_RS19640 PF01370 NAD dependent epimerase/dehydratase family ISU54_RS19645 PF00155 Aminotransferase class I and II ISU54_RS19650 PF08240 Alcohol dehydrogenase GroES-like domain ISU54_RS19650 PF00107 Zinc-binding dehydrogenase ISU54_RS19660 PF01551 Peptidase family M23 ISU54_RS19665 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ISU54_RS19665 PF01676 Metalloenzyme superfamily ISU54_RS19670 PF00581 Rhodanese-like domain ISU54_RS19675 PF00462 Glutaredoxin ISU54_RS19680 PF02556 Preprotein translocase subunit SecB ISU54_RS19685 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ISU54_RS19685 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ISU54_RS19690 PF06426 Serine acetyltransferase, N-terminal ISU54_RS19690 PF00132 Bacterial transferase hexapeptide (six repeats) ISU54_RS19695 PF00588 SpoU rRNA Methylase family ISU54_RS19700 PF02805 Metal binding domain of Ada ISU54_RS19700 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ISU54_RS19700 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ISU54_RS19700 PF12833 Helix-turn-helix domain ISU54_RS19705 PF00512 His Kinase A (phospho-acceptor) domain ISU54_RS19705 PF16527 Two-component sensor protein CpxA, periplasmic domain ISU54_RS19705 PF00672 HAMP domain ISU54_RS19705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU54_RS19710 PF00072 Response regulator receiver domain ISU54_RS19710 PF00486 Transcriptional regulatory protein, C terminal ISU54_RS19715 PF07813 LTXXQ motif family protein ISU54_RS19725 PF04754 Putative transposase, YhgA-like ISU54_RS19730 PF01545 Cation efflux family ISU54_RS19730 PF16916 Dimerisation domain of Zinc Transporter ISU54_RS19735 PF00365 Phosphofructokinase ISU54_RS19750 PF00939 Sodium:sulfate symporter transmembrane region ISU54_RS19755 PF03737 Aldolase/RraA ISU54_RS19760 PF02585 GlcNAc-PI de-N-acetylase ISU54_RS19765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ISU54_RS19765 PF03466 LysR substrate binding domain ISU54_RS19770 PF00121 Triosephosphate isomerase ISU54_RS19775 PF07305 Protein of unknown function (DUF1454) ISU54_RS19780 PF05656 Protein of unknown function (DUF805) ISU54_RS19785 PF00970 Oxidoreductase FAD-binding domain ISU54_RS19785 PF00175 Oxidoreductase NAD-binding domain ISU54_RS19790 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded ISU54_RS19795 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU54_RS19795 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU54_RS19800 PF00230 Major intrinsic protein ISU54_RS19805 PF06005 Cell division protein ZapB ISU54_RS19810 PF01797 Transposase IS200 like ISU54_RS19815 PF02796 Helix-turn-helix domain of resolvase ISU54_RS19815 PF00665 Integrase core domain ISU54_RS19820 PF01695 IstB-like ATP binding protein ISU54_RS19830 PF02661 Fic/DOC family ISU54_RS19835 PF01381 Helix-turn-helix ISU54_RS19835 PF13521 AAA domain ISU54_RS19840 PF18073 Rubredoxin metal binding domain ISU54_RS19845 PF18429 Domain of unknown function (DUF5609) ISU54_RS19850 PF10144 Bacterial virulence factor haemolysin ISU54_RS19855 PF01048 Phosphorylase superfamily ISU54_RS19860 PF01676 Metalloenzyme superfamily ISU54_RS19870 PF01791 DeoC/LacD family aldolase ISU54_RS19875 PF07670 Nucleoside recognition ISU54_RS19875 PF01773 Na+ dependent nucleoside transporter N-terminus ISU54_RS19875 PF07662 Na+ dependent nucleoside transporter C-terminus ISU54_RS19880 PF01026 TatD related DNase ISU54_RS19885 PF01734 Patatin-like phospholipase ISU54_RS19890 PF07043 Protein of unknown function (DUF1328) ISU54_RS19895 PF04972 BON domain ISU54_RS19900 PF16658 Class II release factor RF3, C-terminal domain ISU54_RS19900 PF03144 Elongation factor Tu domain 2 ISU54_RS19900 PF00009 Elongation factor Tu GTP binding domain ISU54_RS19905 PF00583 Acetyltransferase (GNAT) family ISU54_RS19910 PF03603 DNA polymerase III psi subunit ISU54_RS19915 PF08468 Methyltransferase small domain N-terminal ISU54_RS19915 PF05175 Methyltransferase small domain ISU54_RS19925 PF07256 Protein of unknown function (DUF1435) ISU54_RS19930 PF00990 Diguanylate cyclase, GGDEF domain ISU54_RS19935 PF01095 Pectinesterase ISU54_RS19950 PF00873 AcrB/AcrD/AcrF family ISU54_RS19955 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ISU54_RS19970 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ISU54_RS19975 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ISU54_RS19975 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ISU54_RS19990 PF00005 ABC transporter ISU54_RS19995 PF02653 Branched-chain amino acid transport system / permease component ISU54_RS20000 PF02653 Branched-chain amino acid transport system / permease component ISU54_RS20005 PF13407 Periplasmic binding protein domain ISU54_RS20010 PF01791 DeoC/LacD family aldolase ISU54_RS20015 PF03992 Antibiotic biosynthesis monooxygenase ISU54_RS20020 PF10696 Protein of unknown function (DUF2501) ISU54_RS20025 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ISU54_RS20025 PF05524 PEP-utilising enzyme, N-terminal ISU54_RS20025 PF02896 PEP-utilising enzyme, TIM barrel domain ISU54_RS20025 PF00391 PEP-utilising enzyme, mobile domain ISU54_RS20025 PF00381 PTS HPr component phosphorylation site ISU54_RS20035 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ISU54_RS20040 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ISU54_RS20045 PF12833 Helix-turn-helix domain ISU54_RS20055 PF05987 Bacterial protein of unknown function (DUF898) ISU54_RS20095 PF01555 DNA methylase ISU54_RS20110 PF07728 AAA domain (dynein-related subfamily) ISU54_RS20110 PF12102 Domain of unknown function (DUF3578) ISU54_RS20115 PF02796 Helix-turn-helix domain of resolvase ISU54_RS20115 PF00665 Integrase core domain ISU54_RS20120 PF01695 IstB-like ATP binding protein ISU54_RS20125 PF02580 D-Tyr-tRNA(Tyr) deacylase ISU54_RS20130 PF03631 Virulence factor BrkB ISU54_RS20135 PF13419 Haloacid dehalogenase-like hydrolase ISU54_RS20140 PF00679 Elongation factor G C-terminus ISU54_RS20140 PF00009 Elongation factor Tu GTP binding domain ISU54_RS20140 PF03144 Elongation factor Tu domain 2 ISU54_RS20145 PF03951 Glutamine synthetase, beta-Grasp domain ISU54_RS20145 PF00120 Glutamine synthetase, catalytic domain ISU54_RS20150 PF00512 His Kinase A (phospho-acceptor) domain ISU54_RS20150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ISU54_RS20150 PF00989 PAS fold ISU54_RS20155 PF02954 Bacterial regulatory protein, Fis family ISU54_RS20155 PF00158 Sigma-54 interaction domain ISU54_RS20155 PF00072 Response regulator receiver domain ISU54_RS20160 PF04055 Radical SAM superfamily ISU54_RS20160 PF06969 HemN C-terminal domain ISU54_RS20165 PF04220 Der GTPase activator (YihI) ISU54_RS20170 PF01926 50S ribosome-binding GTPase ISU54_RS20175 PF01797 Transposase IS200 like ISU54_RS20180 PF01797 Transposase IS200 like ISU54_RS20185 PF01612 3'-5' exonuclease ISU54_RS20185 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ISU54_RS20185 PF01367 5'-3' exonuclease, C-terminal SAM fold ISU54_RS20185 PF00476 DNA polymerase family A ISU54_RS20190 PF01323 DSBA-like thioredoxin domain ISU54_RS20195 PF01636 Phosphotransferase enzyme family ISU54_RS20200 PF06288 Protein of unknown function (DUF1040) ISU54_RS20205 PF12804 MobA-like NTP transferase domain ISU54_RS20210 PF03205 Molybdopterin guanine dinucleotide synthesis protein B ISU54_RS20215 PF00872 Transposase, Mutator family ISU54_RS20240 PF07729 FCD domain ISU54_RS20240 PF00392 Bacterial regulatory proteins, gntR family ISU54_RS20245 PF07690 Major Facilitator Superfamily ISU54_RS20260 PF00294 pfkB family carbohydrate kinase ISU54_RS20265 PF05025 RbsD / FucU transport protein family ISU54_RS20270 PF02705 K+ potassium transporter ISU54_RS20275 PF17868 AAA lid domain ISU54_RS20275 PF12592 Protein of unknown function (DUF3763) ISU54_RS20275 PF07728 AAA domain (dynein-related subfamily) ISU54_RS20280 PF05762 VWA domain containing CoxE-like protein ISU54_RS20285 PF03590 Aspartate-ammonia ligase ISU54_RS20290 PF01037 Lrp/AsnC ligand binding domain ISU54_RS20295 PF00258 Flavodoxin ISU54_RS20300 PF13932 GidA associated domain ISU54_RS20300 PF01134 Glucose inhibited division protein A ISU54_RS20305 PF02527 rRNA small subunit methyltransferase G ISU54_RS20310 PF03899 ATP synthase I chain ISU54_RS20315 PF00119 ATP synthase A chain ISU54_RS20320 PF00137 ATP synthase subunit C ISU54_RS20325 PF00430 ATP synthase B/B' CF(0) ISU54_RS20330 PF00213 ATP synthase delta (OSCP) subunit ISU54_RS20335 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU54_RS20335 PF00306 ATP synthase alpha/beta chain, C terminal domain ISU54_RS20335 PF02874 ATP synthase alpha/beta family, beta-barrel domain ISU54_RS20340 PF00231 ATP synthase ISU54_RS20345 PF02874 ATP synthase alpha/beta family, beta-barrel domain ISU54_RS20345 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ISU54_RS20350 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain ISU54_RS20350 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ISU54_RS20355 PF00132 Bacterial transferase hexapeptide (six repeats) ISU54_RS20355 PF12804 MobA-like NTP transferase domain ISU54_RS20360 PF01380 SIS domain ISU54_RS20365 PF12849 PBP superfamily domain ISU54_RS20370 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS20375 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS20380 PF00005 ABC transporter ISU54_RS20385 PF01895 PhoU domain ISU54_RS20395 PF00497 Bacterial extracellular solute-binding proteins, family 3 ISU54_RS20400 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS20405 PF00528 Binding-protein-dependent transport system inner membrane component ISU54_RS20410 PF13419 Haloacid dehalogenase-like hydrolase ISU54_RS20420 PF00860 Permease family ISU54_RS20440 PF12241 Trans-2-enoyl-CoA reductase catalytic region ISU54_RS20440 PF07055 Enoyl reductase FAD binding domain ISU54_RS20440 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase ISU54_RS20445 PF10396 GTP-binding protein TrmE N-terminus ISU54_RS20445 PF12631 MnmE helical domain ISU54_RS20445 PF01926 50S ribosome-binding GTPase ISU54_RS20450 PF14849 YidC periplasmic domain ISU54_RS20450 PF02096 60Kd inner membrane protein ISU54_RS20455 PF01809 Putative membrane protein insertion efficiency factor ISU54_RS20460 PF00825 Ribonuclease P ISU54_RS20465 PF00468 Ribosomal protein L34