        recF NONE
        gyrB    6223 ..    6250 +  -4.1  -5.81412   TGGCCAGATAAAAAA        GTCCAG-GGTGG GAAAA CTGCCACTGGGC        TTTTTTTTGCCTGAA  93 62
        yidA    7621 ..    7639 +   -11  -2.73735   TGCTTTTCTACCTGA             GTCCGGTA TTC TGCCGGAC             TCATTCCGCCTGTTT  77 435
        ibpA   13262 ..   13274 +  -5.5  -3.87869   TAATCGGGGGCTGAC                CGGTC ACG GACTG                TTTATACAACGTTAA  61 233
        ibpB   13965 ..   13996 + -10.2  -4.41548   TCCCTTGTTTGTCTT      TTCACCGGAGAG ATTCCCCG CTCTCCGGTGCA       TTTTGTGGCGTATCC 100 191
ISU54_RS00070   15858 ..   15882 + -12.9  -4.23674   CGGGCTATTAAACTT          CAGGGCAGC GTAATTG GCTGCCCTG          TTTGTATTGGTGAAG 100 53
ISU54_RS00095   23061 ..   23089 +  -7.6  -3.80133   GAAAATGGGGAGCAG       TGCGGATAA-G-CC AAA GGACATTATCCGCA       TGTTTTATCACGGTG  72 70
        glyQ NONE
        glyS   28654 ..   28665 +    -3  -3.58329   GGCGCGGTTCGAGCC                TACA TGGA TGTA                 TTTACGGCGTCTTTA  51 170
ISU54_RS00125 NONE
ISU54_RS00130   29902 ..   29921 + -11.4  -4.44914   CTTTGTCAATAACCT            CAGGGGCC TTTT GGTCCCTG             TTATTTTCTTACATA 100 226
ISU54_RS00135   32375 ..   32397 +  -3.4  -4.07885   AAGTCATAACTGCTA           GGGCTGTT GGAAGAA AATGGCCC           TTTTACAGCAAGGTA  58 118
ISU54_RS00140   33609 ..   33644 + -12.6  -2.72511   AAGCCAGCTATGTCC    CATTGGCCTGATAACG GAAA CGATAGCGGGCCAATG     ATTTAAGACACTAAA  88 52
ISU54_RS00145 NONE
ISU54_RS00150   34969 ..   34992 + -11.7  -3.33839   GCTTTGCGGTAACCT          CTGGGTGGC ATGGCC GCCACCCGG           TGTGTTGTTCCTTTT  86 46
        fdnG NONE
        fdxH NONE
        fdoI NONE
        fdhE   46788 ..   46803 +  -2.4  -3.08298   TCAACGCACAGGCAA              CTCGAC GTAT GGCGGG               TATATCGTTTAATTA  43 162
ISU54_RS00200 NONE
        selB   50148 ..   50165 +  -3.4  -3.61517   ATTGCGAGATAGCGG             CCTGTT TTCTGC GACAGG              TTCTTGAGGAGAGCT  51 1
ISU54_RS00215   51249 ..   51276 +  -9.2  -3.62235   ATATAGATATCTTTC        CAATAAGGAGGA ATGA TCCTCCTTGCTG         TCTATTTTCTTTCAT  78 10
ISU54_RS00230   52476 ..   52494 +  -2.4  -3.03771   GGGGGAAATACGTAT             CGGTGT GTTTTTA ATACCG             TCTTGAGAAATATAG  42 81
ISU54_RS00245 NONE
ISU54_RS00250   57110 ..   57129 +  -4.4  -5.50925   GCCAATATACGACAC            TGACTTTA ATGC TAAAGTTA             TTTTTTATCTTGGTT  85 155
ISU54_RS00255   58433 ..   58464 + -13.2  -2.53271   AACAAATGTTTAAAG      TAATTAAAGGGGAG GTAA CTCCCCTCTAATTA       ATATTATCGCCATAA  90 39
ISU54_RS00270   62896 ..   62926 +  -9.1  -2.80512   GTGGCCCTATAAAAA       TGTGCTGAGTAAT AATGA ATTACCCAGCACG       GTGTTTATTCGCACT  67 51
        xylF   67362 ..   67418 +  -3.2  -4.41422   TATTATTTTAATAAA TGGCCA-GTGTTTGTAAGGC-ATTAATT TTG AATTAATAGACTCTCAATCACCTGGCCG TTATTTTATCTATAC  63 63
ISU54_RS00290 NONE
ISU54_RS00295   70254 ..   70273 +  -5.7  -4.91459   TATCCCATAGGAAAA            TCAGTGC CATACC GCGCTGA             TTTTTCTGCCTGTTC  82 44
ISU54_RS00300   71542 ..   71567 +    -4  -4.44448   GAGCGGACGATAATA         TCCCCTGACA TTACTT TATTAGGGGA          TTTATTTAGCCTGCT  66 49
ISU54_RS00305 NONE
ISU54_RS00310 NONE
ISU54_RS00315   74584 ..   74626 +  -4.2  -3.05046   GGTGTTTTGATGCCG GGGCGTTGCATGCAAA ATCATGCACTA TATGCATGCAGTGCTC ATTTTGGCAGGCTAG  47 146
ISU54_RS00340 NONE
ISU54_RS00345 NONE
ISU54_RS00350   78545 ..   78560 +  -4.6   -4.0274   TTTTATGTAGCTCAT              CTGCGG CCCG CCGCAA               TTGTTTCATCATCGC  61 234
        hutU NONE
        hutH   90588 ..   90612 +  -7.8  -2.91912   AAAACCCAGTTCAAT          GGAGGCTCTG ATTAC CGGATCCTCC          TCTCTGAATCCCTGC  62 371
ISU54_RS00405   92078 ..   92108 +  -8.2  -5.20328   AGGGAACAAATGTTA       ACGGGCGGTTGATG GGG TATCAGCGGCCCGA       TTTATTTTTTTCAAG 100 40
ISU54_RS00410   94102 ..   94127 + -10.3  -4.46656   CTTCCTTGGGAGCTC         GACCCGCGCCA TCTC TGGCGCGGGCA          TTTTACTCTTCTGCC 100 133
        eptB   96221 ..   96249 +  -4.6  -4.81551   GCAATTTAGCCGTAA       CT-GGCCAGGCTT ACCC AAGTCTGGCCCAA        TTTTTGATGTGCCTC  74 32
        uhpA   97333 ..   97348 +  -8.2  -3.69338   GATAGCCAGTGGGCA              GGGCGC AATG GCGCTC               TTATTAGGGTTGGTT  73 438
ISU54_RS00430 NONE
ISU54_RS00435   99710 ..   99733 +  -2.4  -2.73468   CTTTAGGTAAACGAG          TCATGATCGA TAGA TCGAGTGTGA           TCATTGGCAATGTTA  40 135
ISU54_RS00440  100208 ..  100234 +  -5.1  -3.44529   AATAACCGAATGATA         TGCAGGGCG AAATATAAC CTCCCTGCA         TTCATTGGTGTGTGC  57 36
         def NONE
         fmt  105489 ..  105504 +  -6.8  -5.32944   CTTCTCCCTTTATTT              GCTGGC GTTT GTCAGC               TTTTTTGGTTATGAA  89 93
        rsmB NONE
        trkA NONE
        mscL  109274 ..  109286 +  -3.3  -4.58395   CTAGTGCCACAACAA                GCCTC GCT GAGTC                TTTTTAGGGAATCAC  64 511
ISU54_RS00705  133840 ..  133858 +  -7.4  -4.72272   CGTACAGAGCAAAAA             GCCAGC GATGAAG GCTGGC             TTTTTGCTGACGGGG  81 205
ISU54_RS00735 NONE
ISU54_RS00740  141683 ..  141694 +  -3.6  -3.81951   CCAGCGCCAACGGAC                CTGG AACT CCGG                 TTTAGTGGTGTGAGC  57 182
ISU54_RS00770 NONE
ISU54_RS00775  147173 ..  147189 +  -2.2  -3.07254   GTTCATTCCGTGCCG              GTGCTG AAGAG CAGCAA              TAATTTGTACTCTTT  43 6
ISU54_RS00780  148385 ..  148396 +  -5.8  -2.92792   ACAACAACCAAGCTT                TGCC TAAC GGCA                 TAATTTCAGGTCGAT  54 200
         crp  150280 ..  150310 + -12.7  -4.75063   AATTCCCTCTAAAAA      CCGGCGTTAA-AGC TGAA GCTATTAGCGCCGG       TTTTTCCCGTTTTCT 100 39
ISU54_RS00800  152572 ..  152598 + -10.1  -3.82218   CATCCATGTAGGCTC        GAG-CCGCGCCA TCCT TGGCGCGGACGC         TTTACTCCTCTGCCT  84 125
ISU54_RS00825  159327 ..  159350 +  -6.6  -3.66178   ATAAACTAACGATTA          TGGCGGCCAT ATAT AGGGTCGCCG           TTTCACCTTAACAGG  65 227
ISU54_RS00830  160427 ..  160450 + -12.4  -3.40899   ATTAATTGTTATTAA          CGTGGCAAGC CATC GCCTGCCACG           TTCTGCTAGCGCATT 100 92
        tsgA  164220 ..  164244 +   -15  -3.20494   TTATCTGCGTTACCG          CCCTGCCGCC GCCAA GGTGGCAGGG          TATTGATGATTCACT 100 42
ISU54_RS00850 NONE
        nirD  168815 ..  168830 +  -6.8  -3.30159   TAGATAGCGGATCAA              TCCAGC TAAC GCTGGG               TTCTCAACAAATTAC  61 63
        nirC  169814 ..  169824 +  -3.2  -2.84574   TAATTTGGCAGCGTT                 TTGC CCT GCGA                 TAATTAGTTGCCCTG  43 41
        cobA  171372 ..  171395 +   -11  -2.53641   GGTTAATGCTGATTA          ATGAGGGGGA AATT TCCCCCTCAC           ATTACTGATGCGTTG  76 117
        mrcA  185000 ..  185023 +   -14  -5.66684   AACTTATCTAAAAAA          CCAGATGATC TGAT GATCATCTGG           TTTTTTTATAAATTA 100 58
ISU54_RS00940  188443 ..  188453 +  -5.4  -4.09822   GTGTAACATGGATAT                 GCTA GGC TAGC                 TTTATCTACTCGCTT  65 86
        yrfG NONE
        hslR NONE
        hslO  190700 ..  190727 + -13.4  -3.82097   AATCCTCGTAATGCT        TAGCCGGGTACC TATT GGTGCCCGGCCA         TTTCCTCCGTTTCAC 100 39
        pckA  192536 ..  192559 +  -6.7  -5.61913   AGTTTAGCGTTACAG          GGGGCAC TTTCAGAATT GTGCCCC           TTTTTTCTATTTATT 100 59
ISU54_RS00980  198285 ..  198340 + -29.6  -2.90813   TGACAAGGACGGCCA TTAAACTGCCCTCCTCATTATTAGAT TGAT ATCCAATAATGAGGAGGGCAGTTTAA TAATTTAACAAAATA 100 45
        feoA  199021 ..  199031 +  -2.4  -3.65996   AACCCCAATAACTCA                 GGTC TGC GCCC                 TATTTCTATCTGCGC  49 30
        feoB  201405 ..  201419 +   -10  -3.15579   TTGCTGCCGAAGTAG               TGGCAG CAA CTGCCA               TTGATCACCCATTAG  74 7
ISU54_RS00995  201716 ..  201739 +   -11  -2.50966   TCACGCACACCAATA          AGAGATGCCC ATAT GGGCATCTCA           ATATGTTGATTCCGT  76 25
        gntX NONE
        nfuA  204566 ..  204576 +  -4.6  -4.00348   CACTTACTTATGTAA                 GCTC ATC GGGC                 TTTGCTTGCTTGCCG  61 99
        malT  212541 ..  212553 +  -4.9  -3.04188   TACCAACACAACTTT                TTATC AAT GATAA                TGTGTCATTCTGGTA  50 203
        glpE NONE
        glpG NONE
ISU54_RS01050  214856 ..  214902 + -15.4  -3.05384   GGGGCCATAAGTGCA CTGAACC-CCAGATCTTGGAT CTTTTT ATCCATGATCTGGAGGTTCGG TTCAATGAAACACCC 100 167
ISU54_RS01055  216705 ..  216715 +  -5.4  -2.80464   CACACTTCACTATCA                 CCAA AAT TTGG                 CTTTGGCGTTCATAC  48 469
        glpD  220199 ..  220228 +  -3.6   -5.0538   CAAGAAATTTAAAAA      CCCTCTTCAATCGG ATAA CCGC--GAAGAGGG       TTTTTTACGGTGGCA  73 114
ISU54_RS01105  232244 ..  232275 +  -8.9  -2.66249   AAACCCTATAAAAAT      TAATGCCAGAG TATAACCCAC CTCTGGCATTA       CTATTATTCCTGACA  66 99
ISU54_RS01145  250606 ..  250616 +  -3.2   -5.3671   ATCATCAGGGTAAGC                 GGCT TTG AGTC                 TTTTTTGCTTGTCTT  80 292
        gntT  253944 ..  253956 +  -9.1  -3.28791   CGACATCCACCATTT                GGGGT GTT ACCCC                TTCTCCGCGCAACCT  67 164
ISU54_RS01185  257344 ..  257355 +  -3.6  -4.30576   TTTGCAACAGTTACG                CGTC TGCT GGCG                 TTTTCCTCGTGAAAA  63 152
ISU54_RS01220  266525 ..  266557 +  -7.7  -3.13432   GACATCAACGACTTC      GCCAATAAAGTACAG CCC CGGCACTTTATGGGC      TTCCATGGTCTTGGA  59 260
        pitA  269525 ..  269545 + -10.4  -5.24129   GATGAGCAATAAAAA            GGCGGCCT AAATC AGGTCGCC            TTTTTTGTGCCCAGA 100 121
ISU54_RS01235  270231 ..  270255 +  -9.9  -4.43642   ATAGGCGCATATGAA          AAACCTCCGGC TAT GCCGGAGGATA          TTTATTAATTCTTTT 100 103
        uspA  271803 ..  271823 + -11.8  -4.91109   TTGAGTAACGTTAAA            CGCTCGCC TCTCC GGCGGGCG            TTTTTGTGATAGACG 100 53
        gdhA  273378 ..  273418 +  -6.4  -2.95586   TAAATAAAACGTTGT CCCCATATTTTTTTAAGAT GAAC GTCG-AGAAAAATATGGGG  TACTTCTTCCCTCTC  56 38
ISU54_RS01255 NONE
ISU54_RS01270 NONE
        gorA  280511 ..  280548 + -11.3  -3.89524   AGATGATTTCGTTAC   TATGGCCCGAACAGGCAG AGA CT-CCTGCACGGGCCATG   TTTCTGAAATACACT  95 35
ISU54_RS01280  281854 ..  281871 +  -3.4  -3.65529   AATCAGCCGTTTTAG             CCGTCCA TTTTC TGG-CGG             TTTCACTCAAGCTAT  52 59
ISU54_RS01290 NONE
ISU54_RS01295  284592 ..  284605 +  -6.7  -2.61298   ATGGTCATATAGCCC               CGACA ATAT TGTCG                CTACTTTTTAGTTTT  56 204
        yhjD NONE
ISU54_RS01325  292547 ..  292560 +  -5.9  -3.14132   GATCAGTGCCAGTAA               TGCCG CTGC CGGCG                TTAATGCCACCCCCA  53 110
ISU54_RS01340  296280 ..  296296 +  -6.7  -2.76964   TACATCATAAAAAAT              TTAAAAC ACC GTTTTAA              TCCTATTGACTCTGG  57 81
ISU54_RS01345  297487 ..  297525 + -12.5  -4.11692   AATAACAGACGTTAA   TGACCGATCGTTGCAGG ATAAA CCTACAGCCATCGGTCA   TTTTACGCCTGGCTA 100 65
ISU54_RS01445  325350 ..  325360 +  -3.2  -2.86202   GAAACGGTTGAATTT                 CGGT TTG ATCG                 GTATTTTCGTGTCCC  43 141
ISU54_RS01450  325498 ..  325535 +  -7.9  -3.45839   TTATGAACTGAAAAA   TAACGTAAAGATGACTT TACC AAGTCGTGTTTACGATA    TTGCTCTTTAACAAT  68 77
ISU54_RS01455  328610 ..  328620 +  -6.8  -4.27316   GGCTTAACCTTACAA                 CACC GAA GGTG                 TTTTGAATTGAGAGA  74 30
         rrf NONE
ISU54_RS01465 NONE
         rrf  329088 ..  329120 + -13.6  -4.62783   CAGGTATCAAATAAA     CAGAAA-GGCCATCC ATTA GGGTGGCCTTTTCTG      TTTTTGCGATCCGTC 100 36
        metA  330791 ..  330811 +  -7.5   -3.8165   ATAGATGCTAATTAT            GGCGGCT GAATCGA GGCCGCC            TATTATTTTCTTCCC  70 70
        aceB NONE
        aceA  334146 ..  334169 + -12.4   -4.4009   GAGTGTGGTCTTATC          AGGAGCCTGC TTAT GCAGGCTCCG           TTTTGTACGGTAGGG 100 53
        aceK  335898 ..  335908 +  -2.4  -3.75153   CGAAAGCAACGCTTC                 TCCC AGC GGGC                 TTTAAATTAACGGCG  51 5
        metH  340825 ..  340862 + -15.7  -3.13784   GATAATGTTGATCTA   ACGAGGGGGATAAACCG TGAT TGGTTTATCCCCTTCGA    TATTACAGTTTAATT 100 58
         pgi  351563 ..  351585 + -10.6  -5.86332   ATCTGTACTTTATTA           GGCCTCTTAT TCT GTAAGGGGCC           TTTTTTTTGGCTTGA 100 65
        psiE  352534 ..  352551 +  -4.1   -3.5764   ATGCTGCCGCTTCTT             CCAATGA GTTA TCAATGG              TTTCGAAATAACCTT  52 494
ISU54_RS01545 NONE
        malK  358016 ..  358037 +  -4.4  -2.71144   CTGTACCAAGAACTG           GGCGTC TAGTTACGGC GACGCC            TGGTTACAGAGAATG  45 17
ISU54_RS01555  359378 ..  359397 + -11.4  -2.66969   GTAACAGCGATTCTT            CAGCCGTC TGCG GGCGGCTG             TACGTTATCTTGATG  80 37
        malM  360551 ..  360568 + -12.7  -5.41359   TATGGCTGGATGGTT             GGTGCGC CTTG GCGCACC              TTTTTTCGTTTGGTT 100 58
ISU54_RS01565  361498 ..  361514 +  -2.1  -2.75382   TTAATCTTGCGGTAT              GCCAGTG ATA CACGGAC              TAATTGAGTAAACTC  39 256
        tssB NONE
        tssC NONE
        tssE  365130 ..  365159 +  -5.9  -3.79138   CCTGCGTGAAAAAAT       CGATGA-TCAATTC CCT GAATTGACTCATGG       TTTACTGAATATGTT  63 201
        sltY  377826 ..  377843 +  -4.2  -3.72984   TATGGTATGCTTGTT             GTACTA GTTAAA TAGTAC              TTTGGGTGGTTATCA  54 248
        trpR  378377 ..  378387 +  -2.4  -4.27584   AAAATCCCGATTGCG                 CCGC CTT GCTG                 TTTTACATTCGAAAT  57 152
        gpmB  379919 ..  379939 +  -4.7  -4.16016   AAAAATGTAAGCGTA            ATTCAGCAC GGT GTGTTGAAA            TTTGTTCAAGCGTAC  63 414
        creA  381215 ..  381234 +   -10  -3.45632   TATAAAAACAAAAAA            GCCAGCAT CTGT GTGCTGGC             TCTTTCCGTCTCTAT  78 154
        thrL  382987 ..  383009 +   -12  -6.11644   AAACAATAGAAAAAA           GCCCGCAC CTAGACA GTGCGGGC           TTTTTTTTTCAATCA 100 45
        thrA NONE
        thrB NONE
        thrC  387756 ..  387768 +  -4.8  -3.61715   TTTTTGATGGCATTG                CCGA AGTAA TCGG                TTATTAACAAAGCTA  57 17
ISU54_RS01695 NONE
         tal  390885 ..  390900 + -10.4  -5.45652   TCGGTATCTGAATGA              GGTGGC GCAA GCCACC               TTTTTTATTGCCGAT 100 68
         mog  391732 ..  391746 +  -2.8  -3.53722   AATAGAAAATTTCTA               TGACAT AAG ATGCCA               TTATGTGCGTGTGGG  48 40
ISU54_RS01710  393252 ..  393281 + -10.3  -5.02287   AATTCACTTTAAAAA       GCCCATAA-TTATT ATC AATAAATTATGGGC       TTTTATCTTTTTCTC 100 44
        dnaK  398981 ..  399022 +  -8.5  -3.04144   CTTACTGTTGCTGGA AACCAGCACGGGCGTCGAG GAAA CTCTACGCCCGTGCACGCA  TGTTAAGGGTAGGAA  65 72
        dnaJ  400236 ..  400255 +  -8.6  -6.08563   GTAAAATGAAAGAAA            TCCTCGGT TGAT ATCGAGGA             TTTTTTTTATCTGTT 100 76
        nhaA  401636 ..  401665 + -13.7   -3.2048   CACGTTATTGATTCA       GCATTGCTGCC CAAGCGCA GGCAGCAATGC        TTGGTGGAATTTAAA 100 49
        nhaR  402729 ..  402742 +  -9.5  -3.90048   ATAGAGATAAAAAAA               CCGGC CTAA GCCGG                TCTTTTTACAAGCAC  81 113
        ribF NONE
        ileS NONE
        lspA NONE
        fkpB NONE
        ispH  409417 ..  409434 +  -8.4  -5.55769   TGTCAGCAGTCTGAA             GCAGCC CTTTGT GGCTGC              TTTTTTATTGTGCCC 100 237
ISU54_RS01775  410123 ..  410147 +  -9.9  -4.44046   ATAGGCGCATATGAA          AAACCTCCGGC TAT GCCGGAGGATA          TTTATTTGGGGTAAG 100 103
        dapB  411375 ..  411393 +  -2.4  -5.80951   AATCATTTGATAATA             GGGCAATA TTT TATTATCC             TTTTTTATTTTAAAT  85 81
        carA NONE
        carB  416246 ..  416265 + -13.6   -4.7629   CGTGGCGAAAATCAA            GGGCGATG GCAA CATCGCCC             TTTTTACGTTCGTAG 100 55
ISU54_RS01800 NONE
ISU54_RS01805  418667 ..  418680 +  -5.3  -3.05914   GCCACGACACTAGGC               TAGGA GCAG TCCTA                TATGTATCATTCGCT  52 58
        folA  419301 ..  419327 + -15.3   -3.9941   AAAACAATTAGCATA         CAGGCCCATTA GGTAA TAATGGGCCTG         TTTCATTGTGCCCAG 100 60
ISU54_RS01815  420010 ..  420042 + -11.3  -4.08767   CCTTATAGGCGCATA      TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA      TTTTAGAAAAATAAA 100 99
ISU54_RS01820  420750 ..  420761 +    -3  -3.14878   CAGTTGGATGGATTG                GAAT GTTG ATTC                 TGTTAAATTGAAAAG  46 83
ISU54_RS01825  421311 ..  421330 +  -7.9  -3.93026   TAGGTGAAATCTAAA            GACGCAT AAGCTC ATGCGTC             TTTAATTAGCGTCTT  74 53
        djlA  429556 ..  429568 +  -7.7  -3.81339   CATGTAGCTGCAGCC                GCGAT GCC ATCGC                TTTGGCTTCTGGATG  69 409
ISU54_RS01875 NONE
        tssB NONE
        tssC  435482 ..  435501 +  -2.8  -3.61398   AGCGAAAAGAAATAA            GCGCTGTGA ATA TCACT-CGC            TTATTAGAGGGGGAA  50 26
ISU54_RS01890  436181 ..  436205 +  -7.2  -3.03243   AGAAATGCATTAGGA          CTGCTCTC GCGAGTTAG GAGAGCAG          TCTTCCAAACTGGAT  61 44
ISU54_RS01895  436660 ..  436674 +  -2.1  -3.64703   TCGATTACTCCTATG               GAATG GTTCG CGTTC               TTTAAATAACGCACA  49 6
        tssF NONE
        tssG NONE
        tssH NONE
        vgrG NONE
ISU54_RS01920 NONE
ISU54_RS01925 NONE
ISU54_RS01930 NONE
ISU54_RS01935 NONE
        tssJ NONE
        tssK  450886 ..  450920 +  -3.5  -2.71712   CGACAAGGAAGGCTC     GGATGAACGAATTTG AACGC CAGATCCGTGCAGCC     ATTTCCGCAGCACGC  44 20
ISU54_RS01950  452651 ..  452665 +  -4.2  -4.24711   GCTCTGATTTTATTT               TGGGCA CTG TGGCCA               TTTGTTGCAATTTTC  63 178
ISU54_RS01960  456682 ..  456692 +  -3.2  -4.07885   CTAAACGCCAGCCTG                 CTTG ATT CAGG                 TTTTCCAGCACCATC  56 331
ISU54_RS01975  463345 ..  463355 +  -6.8  -2.91099   AAACCCGGACACGGT                 GGCT GAC AGCC                 CTATTTTATCGTGTA  58 39
ISU54_RS02000  471218 ..  471248 +   -12  -3.20896   AGTTAAACGTGTTAC      TTGTTGG-GCCGG TACGAC CCGGCACCAACAA       TCTGTTAGTTACTTA  86 125
        leuO  479068 ..  479082 +  -3.5  -3.87075   AAATCGCATCGCTCA               CGGCA ATGTA TGCTG               TTTATCGAAACTGAT  56 146
ISU54_RS02040  481325 ..  481364 + -13.6   -3.5362   GTTCACCATTCCTCC  CCGCAGTGACCGGTGTTA AGTC TCACACTGGTCGCTGCTG   TCTTTCTGACCGTTC 100 44
        ilvI NONE
        ilvN  484019 ..  484039 + -13.3  -5.24129   CGCTCTAATGATCGG            GCTCAGCGC ATA GCGTTGAGC            TTTTTTGTGCCCAGA 100 54
ISU54_RS02055  484721 ..  484753 + -11.3  -5.54403   CCTTATAGGCGCATA      TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA      TTTTTCTTATTTTTT 100 99
         cra  486177 ..  486194 + -11.3  -4.45544   GTTCACTATAACGAA             TCAGGGC ACCC GCCCTGA              TTTTGATTGCTGACA 100 40
ISU54_RS02070  487679 ..  487693 +  -4.2  -2.87132   TCATCCCTTAAAATA               TCCCCT TCT ATGGGA               TATATCGCAAAAACA  46 424
        mraZ  488281 ..  488294 +  -3.9  -2.78384   TGAGCGGCTACAGGG               CTTAT CGCT ATAAG                TATGGTAGACAACAA  45 13
        rsmH NONE
        ftsL NONE
ISU54_RS02090 NONE
        murE NONE
        murF NONE
        mraY NONE
        murD NONE
        ftsW NONE
        murG  498925 ..  498947 +  -2.8  -2.78738   TAAAATCGCGATCAC           TTTGAAATAG CTA CAATTTTAAA           TGGTTACGGTTTTGA  42 38
        murC NONE
ISU54_RS02130 NONE
        ftsQ NONE
        ftsA NONE
        ftsZ  504787 ..  504797 +  -3.2  -2.74122   TAATTTCCGAATATT                 TGGA ATC TCCG                 CTCTTTGTGCTAAAC  43 38
        lpxC  505974 ..  506011 + -11.4  -2.71731   AGCTACTTATCACGC   TTGGTTGCGTTGGC ACCCTCTCCG GCCAACGCAGCCAG    TCGTTCCAAGATCAC  80 205
        secM  507085 ..  507103 +  -6.6  -3.31248   TTTTATACAACCTTT             GGCCGCCG GTT TGGTGGTC             TTGTAAGAGATATTA  61 63
        secA  510054 ..  510071 + -12.7  -4.92828   TTGTCAGCAGTCTGA             GGGCGGT TAAT ACCGCCC              TTTATTTTTAAGTTT 100 240
        mutT  510558 ..  510585 +  -9.3  -5.24129   CCTACTTTATTTTAA        TGGAGCAAGACG TCCGT CGT-TTGCTCCA        TTTTTTGTGCCCAGA 100 63
        uxaC NONE
ISU54_RS02250 NONE
ISU54_RS02255  525167 ..  525206 + -12.2  -2.77051   TGTTTTTTATGGAAA  CGCACTTCCCCTTCACACT TTA AGC-TGTAGGGGGAGTGCG  CTGTTTGCTTATTAA  83 76
ISU54_RS02260  525818 ..  525836 +   -16   -4.8048   GATAACAATAAATAT             CCTCCGGC ATA GCCGGAGG             TTTTTCATATGCGCC 100 44
        rlmG  534961 ..  534992 + -15.2  -3.85879   TTTCTAATCGGTATT      TCACAGGGTGGGGT TTTC GCCACACCCTGTGA       TTATTCTCAGTTCTA 100 34
ISU54_RS02335  547037 ..  547051 +  -2.9  -2.89564   ATGTGTCCGATTAAC               GTTAA TTAAC TTAAC               TCTCTGGGATGAGCC  42 40
        cdiA NONE
        cdiI  557164 ..  557185 +  -3.9   -3.7941   GGTTTGTTACGTATT           TTTAAAATT AAGG GATTTTAAA            TTGTTGTGGAGAATA  56 5
ISU54_RS02350 NONE
ISU54_RS02355 NONE
ISU54_RS02360  557758 ..  557768 +  -3.2  -2.78606   AGAATAATTATATTC                 GTGA GGT TCGC                 TGATATGTTACTTAG  43 12
ISU54_RS02365 NONE
ISU54_RS02370 NONE
ISU54_RS02375  559373 ..  559407 +  -5.6  -2.62263   AGATACAAAAGCAAG     CTCCCGCCGCTGCATT CGG AGTACAGCGGTAGGAA     TGCTGTCAGCGGCCT  52 193
ISU54_RS02395 NONE
ISU54_RS02400  569228 ..  569244 +  -6.5  -2.83677   TGTGGCGCTACAAAA              GCCTGAG TGG CTCATGC              TATAGTAAATTCCTT  55 82
ISU54_RS02405 NONE
ISU54_RS02410 NONE
ISU54_RS02415 NONE
ISU54_RS02420 NONE
ISU54_RS02425  573874 ..  573889 +  -2.5  -3.53563   CATGCGGCAGAGTGA              TCGGG AGATTA CCTGA               TTTGGAGAACACTAT  48 47
ISU54_RS02430  576429 ..  576443 +  -4.2   -3.2946   TGCTGCTACCACAAT               TTCGCG CAC CGCCAA               TTCCTGCGTTTTCTT  50 368
ISU54_RS02460 NONE
ISU54_RS02465 NONE
ISU54_RS02470  585117 ..  585128 +  -4.4  -3.16068   TAATAAATAATATCG                CCAT TTTA ATGG                 GTTTTAAATTAAAAA  49 93
ISU54_RS02475 NONE
ISU54_RS02480  586236 ..  586265 +  -2.2  -2.91681   TAAACACAGTGATAA       CTCTACCATT TTTATATTTT AATGGCAGAG        TATATAAAATTCCCA  42 56
ISU54_RS02485  587117 ..  587130 +  -3.7  -2.79831   CTCATCATTAAATGG               GCGCG CGAT CGAGC                TGTGATAGGGCTTCG  45 248
ISU54_RS02500  589613 ..  589633 +  -6.1  -3.34715   GTTGAACGATTAGTT            TTGTCGTCC TAC GGGCAACAA            TGTTTAAGCAGGCTG  59 157
ISU54_RS02515  591394 ..  591410 +  -3.8  -3.93868   GTGTGAGGTATTATT              GTTAAA TTGAT TTTAAC              TCTTTCTTTTGGCGG  58 35
ISU54_RS02520 NONE
ISU54_RS02525  593366 ..  593386 +  -2.5  -4.56367   GAGAATCAATATAGG            TGATGCCTT TTA ATGGCATGA            TTTATTTGTGAGGTG  61 13
ISU54_RS02530  594222 ..  594240 +  -3.8  -3.55444   GGAAGGGCAACCGGT             CTTTCAGG CGT CATGGAAG             TTTAAGGACTCCAAA  51 387
        tsaD  600532 ..  600557 + -12.6  -3.47841   CAGAATGGCTGAGCG         TGGCTGCGGC TGCGTT GCCGCAGTCA          TTCTGATATGGGTGT 100 42
        folB  602088 ..  602110 +  -8.4  -5.77632   AAATTCTAAATAGAA           CGGCACTGTT TTC AGCATTGCCG           TTTTTTTGTGGTTTT 100 235
        bacA  603149 ..  603172 +  -2.2  -4.17048   CAAGATCGTGTCATC          GGGGGGGCAG GAGT CTGAAACCCC           TTGTTTTACAGGGGG  55 204
ISU54_RS02590  606708 ..  606727 +    -5   -3.0693   ATCCATAAAGTGAAT            GGCATC CGTATATC GATGCC             TGGTTTGGTTTACAG  50 33
        glnE NONE
        hldE NONE
        yjeH  612837 ..  612863 + -10.1  -3.82218   CATCCATGTAGGCTC        GAG-CCGCGCCA TCCT TGGCGCGGACGC         TTTACTCCTCTGCCT  84 146
        ribB  614551 ..  614562 +  -7.2   -2.9138   GCCAGCTAATCTGAT                GGCG ATCT CGCC                 TGATATTATTTGGTG  61 32
        ygiD  616120 ..  616156 + -10.3  -2.57564   GGCAATGACTTTGGG    TATGGTAAAGGAAGGTG CAT TGCCTTCCCTTACTATA    ATTATCCCAAAATAA  74 394
        nudF NONE
ISU54_RS02650  621191 ..  621205 +    -5  -3.36968   GCGGTGGCCGTTCCG               GTTTGT TAG ACAGAC               TTATGGCCTTGCCTG  53 17
        cpdA NONE
        yqiA NONE
        parE NONE
ISU54_RS02670  625768 ..  625779 +  -4.4  -3.80625   GGTAATGGTTTCATG                CCAA GGAA TTGG                 TTTGCCTTGTGGAAC  56 192
        parC  628839 ..  628865 +    -8  -2.72379   TAAGGAAACCAGCCA         CCACCATGGC GGAAATG GCTGTGGTGG         TGATTGAGGCGTTCG  60 44
ISU54_RS02690  629875 ..  629885 +  -8.2  -3.89695   CAGGCTATCGCGGCC                 CCGC GCG GCGG                 TTATATTTATCGCCA  75 60
        ftsP  631574 ..  631586 +  -9.1  -3.83409   CGCATGTCTCGCTTG                CCTGC TTC GCAGG                TTTACTGATATGTAC  78 156
ISU54_RS02710  635285 ..  635315 +  -9.7   -4.2558   GTATAAACAGGAGGA       CTGGCAGCATGAC ATGCG GTAATGCCGCCAG       TTTTGGTACGAGATA  93 4
ISU54_RS02720  637862 ..  637878 +  -5.8  -4.65916   AAGGCTTCATAGAAA              CGGCGT ATTAG ATGCCG              TTTTATTCACCTGGA  75 70
        exbB NONE
        exbD  641928 ..  641966 + -13.2  -3.18505   GCGGCGCAAAATAAT   TTTTTGCAAGCGCGGTTA CTG TTACCGCGCTTGCATCAA   CTTTGGTTTTTGAGG  95 27
ISU54_RS02810  653202 ..  653222 + -12.5  -3.79864   AGGCGCATATGAAAA            ACCTCCGGC TAT GCCGGAGGA            TATTTATTCTATGAA 100 105
ISU54_RS02815 NONE
ISU54_RS02820 NONE
ISU54_RS02825  658006 ..  658023 +  -4.1  -4.87786   TGTCAATAACCTCAA             GCGAC CAATAAGT GTCGC              TTTTTATGCCGTTAG  71 208
ISU54_RS02835  661384 ..  661400 +  -2.9  -3.90416   TAATTCACCCGACTC              TCCCATT TGA GATGGGC              TATTTTGTGTCATGT  54 444
ISU54_RS02880 NONE
        fliE NONE
        fliF NONE
ISU54_RS02895 NONE
ISU54_RS02900 NONE
        fliI NONE
        fliJ  675338 ..  675367 + -15.9   -5.4833   GCGACCATAAAAAAA       TCCGTCATAGGGA ATAT TCTCTATGACGGA        TTTTTTATTGGGTGG 100 56
        flgB NONE
        flgC NONE
        flgD NONE
        flgE  680277 ..  680292 +    -4  -2.80935   GACAGCATGATGAAT              GCA-CTG TTC CAGGTGC              TGTAATGGATAAGCT  46 5
        flgF  681035 ..  681062 +  -5.6  -2.52015   GGCAGTTAATGGCGA        TGGCGC-GGTGAA GTC TTAATCTGCGCCA        CTTGCTCAATATGGA  52 32
        flgG NONE
        flgH NONE
ISU54_RS02965 NONE
ISU54_RS02970  684074 ..  684088 +  -4.2  -2.90349   TTGGGCAGTAAATAA               CGGCTT ATC AAACCG               ATTTAAGTTTGGCGA  47 26
        flgK NONE
        flgL NONE
ISU54_RS02985  687607 ..  687636 +   -13  -2.75708   CCCGTTATTCTTCAA       GCTG-CATGTGCG TTGAT CGCACATGTCAGC       CGTTTTTTCAGCCCC  91 108
ISU54_RS03000  691035 ..  691081 + -15.4  -3.05384   GGGGTACTCAGTGCA CTGAACC-CCAGATCTTGGAT CTTTTT ATCCATGATCTGGAGGTTCGG TTCAATGAAACACCC 100 68
ISU54_RS03005  692839 ..  692861 +  -6.9  -2.91681   GAATATTAGCAATAT           GCCACGCGC CCACC GTGAGTGGC           TGTGTCGGGTTGACC  58 424
ISU54_RS03015  694934 ..  694950 +  -4.5  -3.06501   GAGAACAACGCTTAA              TTGAGAA AAA TTCTTAA              TTGGGTGCAACTCTC  50 153
ISU54_RS03020  696504 ..  696525 + -10.2  -3.86346   TACGCCGTCAGGGAA           TTAGGCCC CTGCAT GGGCCTAA            TTTATGGGGCAATGA  86 62
ISU54_RS03065  719222 ..  719242 +  -4.9  -3.71848   CATCCAAGGGAGCTG            TATTTTTAT TTT ATAAAGATA            TTCTTACTAAGGGAA  57 418
ISU54_RS03070  720479 ..  720491 +  -9.1  -2.73212   TATTCACCCAGTCTC                CCTGG TTG CCAGG                CTTGTGCTTGCTGTT  66 364
ISU54_RS03150 NONE
ISU54_RS03155 NONE
ISU54_RS03160  757003 ..  757024 +  -2.9   -3.5511   GTATCTTTACGATCT           GCCTGTTTT CTCC AGCGCAGGC            TCTTTGTCAATAACC  48 140
ISU54_RS03165  759194 ..  759224 + -11.3  -3.24188   TTATCCCATAAAAAA       CGGCGCATATT CTGTCCTGC AATATGCGCCG       TTGATCATCATGTCG  86 55
ISU54_RS03180  773605 ..  773640 + -17.6  -3.85698   TGCCCCCAAAGAGTC    ACCCATACCCACCGGT CTTA ACCGGCGGGTATGGGC     TTTATGACAAAACAG 100 53
ISU54_RS03195 NONE
ISU54_RS03200  781330 ..  781348 +   -11  -2.73735   TGCTTTTCTACCTGA             GTCCGGTA TTC TGCCGGAC             TCATTCCGCCTGTTT  77 228
ISU54_RS03210  784512 ..  784548 + -12.4  -3.56142   CATAAACAAATTATA   GGGGC-TTGCGCAATGT CTTA ATTTTGCGCAAAGCCCC    TTAATTATTGATGGG 100 176
ISU54_RS03240 NONE
ISU54_RS03245  794294 ..  794331 +  -2.1  -4.17048   TAAAATTGAATGTGT   TTGGCTCTATGTGATCTT TAA AATATC-CTTAGGGTCAA   TTCTTTTAGACAAGA  55 167
ISU54_RS03260  798517 ..  798531 +  -4.2  -2.88427   GGTTTTATCAACGAA               GAAACG GCT CGATTC               TATATAGCCCCTCTT  47 351
ISU54_RS03270  800864 ..  800882 +  -3.9  -2.62263   AGTGAATTATTGGTG            C-TTTCCC AACT GGGAAAAG             TAATATAAAAGACAT  44 242
ISU54_RS03275  801782 ..  801795 +  -6.7  -3.32294   AAGAACGCTAAAAAT               CGGTA TCAA TACCG                TTATCCGCACTTTAA  61 314
ISU54_RS03285  802694 ..  802705 +  -4.4  -4.17425   AAAAAATAGTAGGAA                GGAA GACG TTCC                 TTTTGCGCTGGTTCT  61 152
        tssB  804265 ..  804282 +  -2.7  -2.89447   TGGCGCCAAAAGAGG             GTTAATC CCGG GATTGGC              TGCTTGTCATTAGAA  42 21
        tssC NONE
        tssK NONE
ISU54_RS03305 NONE
ISU54_RS03310 NONE
ISU54_RS03315  810218 ..  810237 + -11.4  -5.69068   AGGGTAACCCCGCAA            GTAGGCGG TTCG CCGCCTGC             TTTTTTGTGTTTTTA 100 109
        tssH NONE
ISU54_RS03325 NONE
ISU54_RS03330  817857 ..  817871 +  -4.2  -2.66787   AGAGCATAAATCAAC               CCCTCT GGG AGAGGC               TGCTATAAATATTCC  45 100
ISU54_RS03335  818412 ..  818424 +  -4.9  -4.27686   TCGAATAAATTAATA                TGATT TTC AATCA                TTTTCAATCATTTTC  66 155
ISU54_RS03340  818663 ..  818684 +  -2.2  -3.76402   GATCATCAGGTAAAA           TCCTCGCA TTTATC TGAGAGGG            TTTGATGGCTAAGGT  51 28
ISU54_RS03350 NONE
ISU54_RS03355 NONE
ISU54_RS03360  823657 ..  823678 +  -2.2  -3.76402   GATCATCAGGTAAAA           TCCTCGCA TTTATC TGAGAGGG            TTTGATGGCTAAGGT  51 95
ISU54_RS03365  824623 ..  824633 +  -2.6  -5.36441   CATTACACAAACTAT                 TTAT ATA ATAA                 TTTTTTGTATAAGGA  76 268
ISU54_RS03370  826060 ..  826086 +    -5  -4.25056   TAAGACGCAAGAAAA         CCGAAGTTTGTC ATC GACATCCTCCGG         TTTCTTCGTCCCGTA  66 462
        speF  829139 ..  829168 + -11.5  -3.05521   TCTCCGCTCCATCAG       CCGAGGCCATT TTTTAATT GATGGCCTCGG        TATTAAACATCTCAT  83 50
ISU54_RS03390 NONE
ISU54_RS03395 NONE
ISU54_RS03400  833469 ..  833491 +  -6.3  -3.54424   TTATCTAGCCAGAAA          C-TGTTGGCG GCGT CGCCAGCACG           TTTCCCGACATAGCG  59 304
        trmB NONE
ISU54_RS03435  841049 ..  841066 +  -9.8  -4.91852   CTGATCATTAAACAG             GGCGCC CTAACC GGCGCC              TTTGTTTTTACTGGC 100 57
        glsB  842071 ..  842082 +    -3  -3.29829   ACAGCTCTTCTTCTG                CTTA AAGA TAAG                 TTCTGGCAGAGTATA  47 42
ISU54_RS03445 NONE
ISU54_RS03450  842907 ..  842931 +  -7.7  -2.75963   TAGAGTAATAAAAGG          GGGGGGGGGGA TAT TCCCCCTCCAA          ATTTAGAATCGCCAT  61 33
ISU54_RS03455  845058 ..  845072 +  -4.3  -2.58959   GGGGTAAAGATAAAT               GACAA TGGAT TTGTC               CTCTATTTAATCTCA  45 72
ISU54_RS03460  852950 ..  852962 +  -3.4  -4.69664   CCAGTAGCGAGTTAA                GGAA CAATT TTCC                TTTTTCGGTAATCTG  66 244
ISU54_RS03495  859048 ..  859058 +  -8.2  -2.54655   GTGTTATAAAGCGGG                 CCGG GAG CCGG                 TAACTTCCAGATTTT  58 411
        speA  869913 ..  869932 +  -8.6  -5.40072   TCAGTATCGATTAAA            GGGCAAAC TCAG GTTTGTCC             TTTTTTTCGGCGCGA 100 56
ISU54_RS03550  870602 ..  870623 + -15.9  -2.56596   GTTTGTCAGCAGTCT           GACGCCCCA ACAG TGGGGCGTC            TGCATTGATAAGAGA 100 265
         tkt  874051 ..  874066 + -10.4  -5.93809   ATGCACCTGTTAAAA              GACCGC TTTT GCGGTC               TTTTTTTTGTGCCCA 100 166
ISU54_RS03570  874756 ..  874776 + -12.5  -3.70709   AGGCGCATATGAAAA            ACCTCCGGC TAT GCCGGAGGA            TATTTATTGACTAAT 100 105
         epd  876037 ..  876050 +  -4.5  -4.20148   AGCGGTTTCTAGTAT               GGCGT ATTA ACGTC                TTGTTTTACCGTGAT  63 29
         pgk  877309 ..  877328 +    -7  -3.82208   CAGTAATTTGGATAA            CGGGGGGT CAAT GCCGCCCG             TTTCGCTATTTCCTC  67 35
        fbaA  878519 ..  878546 + -14.2  -3.62046   GTCTGTTCGGACTGA        CCTAAAAGGCCC TACG GGGCCTTTGAGG         TTATTGACAAAGTGC 100 46
        mscS  879841 ..  879856 +  -7.5   -4.7497   GGTAAATAGATTAAA              CGGGC CTCAGT GCCCG               TTTTTACTCGCTCGG  85 61
        argO  880805 ..  880825 +  -2.6  -3.48924   GATGTTAATGGAATT            TCAGTG AGTGTCGTG CACTGA            TTCTCTGACAGGTGC  48 145
ISU54_RS03605  881814 ..  881830 +  -4.3  -4.02139   GTGTCAGGTCAATCA              GTTCGCC CGA GGCCAGC              TCTTTTTCGATTTGC  61 185
        rpiA  883575 ..  883611 +  -2.2  -5.22039   GTGATTGGCTAAAAT    TTTTCAGGGTGTCGTT TATTT GGCTTCACCCTGATAA    TTTTTTGCCTTTGAA  71 29
        serA  885331 ..  885357 + -22.4  -6.02914   TTGTCAGCAGTCTGA         CACCGGGGATCC ATA GGATCCCCGGTG         TTTTTTTTATCTCGA 100 237
ISU54_RS03645 NONE
        pepP NONE
        ubiH  890264 ..  890277 +  -6.7  -3.63805   ATCGGGATTAACGCG               CCTCA TCGT TGAGG                TTTACCCTATGGGGT  65 53
        ubiI  891612 ..  891663 +  -8.3  -3.05022   GATTTGCCAGAATGG CTGGAGCGT-TCTCAATAATACGCCG TTA CGG-GTATTAATGAGACAC-CGCCAG TGTGTGTCTAAAGCA  65 8
        gcvT  893452 ..  893470 +  -3.1  -3.26779   TATTCTGAATTATAA             GAGCC TTCTCTTTT GGCTC             TATCTCTTTTAAGGA  47 54
        gcvH NONE
        gcvP  897086 ..  897112 +  -7.2   -3.9749   CATCCATGTAGGCTC        GAG-CCGCGCC TTCTCT GGCGCGGACGC         TTTACTCTTCTGCCT  72 142
ISU54_RS03685  898269 ..  898291 +    -2  -4.93661   TAACGACAGTTTTAT           CCATGATAAA TGA TTTACCATTG           TTTTATTATTGGTCT  68 510
ISU54_RS03700  902281 ..  902303 +  -3.3  -2.76686   GGTGTACACTGAAAT           CACTCTCAG TTAAT CTGAGTGCG           CTATTTCTGTACAGT  43 129
ISU54_RS03705  903196 ..  903208 +  -6.3  -3.52063   TACCCCGCATAATCG                CACAA TGG TTGTG                TTAGTGTTTAATTTC  61 141
ISU54_RS03710  903871 ..  903886 + -10.4  -2.89564   AAAACAAAATACAGA              GACCGG TTAA CCGGTC               TCTGTAGAGTAGAAC  75 61
        sdhE NONE
ISU54_RS03725 NONE
        creB NONE
        creC  908099 ..  908125 +  -3.7   -2.6155   TTCATGGTCGTAAAC         TGCTCTCCT GATGTTAAA AGGAGTGCA         ATTCATGTTAAAAGG  44 94
        creD  910097 ..  910108 +  -3.6  -4.34267   CTCTTCCATCAGGCG                GGGG CTAA CCTC                 TTTTAGGTTATGTAA  64 514
        xerD NONE
        dsbC NONE
        recJ  913825 ..  913840 +  -3.2  -3.42574   AACTGTCGTACAGAT              CCGTTA GAAT TATCGG               TTCTCATGACATTCC  49 141
        prfB NONE
        lysS  916542 ..  916557 + -11.8   -4.7497   ACGATAAATTCCTCA              GGGCGC TACG GCGCCC               TTTTTACTGAGTCAG 100 54
ISU54_RS03775 NONE
ISU54_RS03780  918210 ..  918225 +    -9  -5.19879   TCCAAACTTTTTAAA              GGCATC TCAC GATGCC               TTTTTGTATTTAGAG 100 75
ISU54_RS03790 NONE
ISU54_RS03795  919821 ..  919835 +  -7.2  -3.70307   ATGACTTGCTATAAA               TAACCT ACT AGGTTA               TATTTATTAAGTGGA  68 136
ISU54_RS03800  920151 ..  920165 +  -2.8  -3.79251   ATGATGTTTTGAATG               TCTCGT TTA AGGAGA               TTTAATGATGAAATG  52 6
ISU54_RS03805  920862 ..  920896 + -10.2  -5.26155   GAACACCTCTGAATA     CTGACTGAACAGTT ATTAGTA AACTATTCAGTCAG     TTTTTATCTTTGTAT 100 319
ISU54_RS03815 NONE
ISU54_RS03820  924109 ..  924160 +  -6.6  -4.40993   TCACCTCACTTTCAA CAAAAGCGATAGCCCGCCCCC CTATTTTTATC GGTGGCGGGA-AGCGCTTTTG TTTTAATAATTTATA  74 104
ISU54_RS03845  926845 ..  926858 +  -3.9  -3.76125   TGCTTTCTGATGCCT               GATAA AACC TTATC                TTTCAGTTAAGCTAA  56 81
ISU54_RS03850 NONE
ISU54_RS03855  929033 ..  929048 +  -4.6  -4.21343   TTATATAACCGGTAG              GGGGAT CTGA AGCCCC               TTTATCTGTATTCGC  63 33
ISU54_RS03860 NONE
ISU54_RS03865  930268 ..  930280 +  -3.3   -2.8372   TTGCTGAAAATATAA                GCGAC AAT GTCGG                ATTTCCTGAAGGGTG  43 361
ISU54_RS03870 NONE
ISU54_RS03875  933479 ..  933508 +  -7.3  -2.94412   AATCATGATTTGGTT       GAATATTCCTACA TTGT TGTGTGAATATTC        TCATTTGAAGTTGCG  61 266
ISU54_RS03880  934663 ..  934673 +    -4  -3.31144   AAGAGCGATGTCAAT                 TTTG CAT CAAA                 TTATGGCGATACGGC  51 66
ISU54_RS03885  935636 ..  935660 +  -9.4  -3.80733   TGTCTACCGCAGCCA         GTAGCGCCGTA TTAA TACG-CGCTAC          TTGTTCTGGCGTGAG  73 517
ISU54_RS03930  946510 ..  946526 +  -2.2  -4.82901   CAATTCCCCCACGTG              CCGTTG GTATG CGATGG              TTTTTGTGCACCACC  66 81
ISU54_RS03935 NONE
ISU54_RS03940 NONE
ISU54_RS03945  949988 ..  950017 +  -2.9  -2.92335   GATGAAAGTTTTTAA       TTAATCGTTGCCCA TTA TGGGCAAC-ACCAA       GTATTTATTATTTAA  43 22
ISU54_RS03950  952124 ..  952145 + -12.3  -5.47218   ACTGAATGCCATACA           CGCCCATTC AGCC GAGTGGGCG            TTTTTTTACATCGAC 100 47
ISU54_RS03955  952523 ..  952533 +  -2.6  -4.66163   CATTTCTCTCAATCC                 TAAA GAA TTTA                 TTTTTAACTCACAAT  64 23
ISU54_RS03965  955787 ..  955808 + -12.3  -3.49634   TTGTCAATAACCTCA           CGGGCTTCC ATCA GGAAGTCCG            TCTTGTATTTAACAT 100 310
ISU54_RS03980  961235 ..  961249 +  -7.1   -3.1505   AGTCGAAGAGACGAA               CCGCA GACCA TGCGG               TTCATCAACGGTACT  62 120
ISU54_RS04060  979306 ..  979335 + -14.5  -3.44206   ATCGACGGCTGACTT       CCTCTTCCTGA-CA ATC TGCTCAGGAAGAGG       TTATCGTGGATCTTG 100 47
ISU54_RS04070 NONE
ISU54_RS04075  982266 ..  982284 +   -16  -4.37092   GAAAGCTTTACTGAA             CCCCCAGC CTA GCTGGGGG             TTTTCTGGGCACAAT 100 263
ISU54_RS04100  991192 ..  991208 +  -2.3  -4.68209   TTATAAACTTAAACA              GTTATTT GAA AATTAAC              TTTATTTCTTGAAAT  63 368
ISU54_RS04105  992052 ..  992067 +  -4.8  -3.12957   ATTATATGTTTGCTA              TCATTA TTTA TAATGA               GGTTTTTTTTGTTAA  51 69
ISU54_RS04110  992648 ..  992660 +  -4.1  -3.12449   TCCATCTAAAATAAA                TGGTG TAA CATCA                TGTATATTAGTGGCA  49 94
        gspD NONE
        gspE NONE
        gspG NONE
ISU54_RS04135 NONE
        gspI NONE
        gspJ NONE
ISU54_RS04150 NONE
        gspL 1001388 .. 1001403 +  -3.3  -4.60924   AACTAAGCAGCCAAC              CATGA GTTACG TCATG               TTTTTACAGCATTTA  65 21
ISU54_RS04160 NONE
ISU54_RS04165 1002770 .. 1002784 +  -5.8    -3.186   TAGTATTTTTAGCAG               TCAAAT CTG ATTTGA               TATCTTGATATCTTG  55 77
ISU54_RS04175 1004077 .. 1004091 +  -2.8  -2.91582   GGGGGGGCAATTATT               GGTATG ATT TATGCC               TATATACATCCGATG  43 19
ISU54_RS04180 1004553 .. 1004564 +  -2.2  -3.15078   CATTTAACTATCACA                GCAT AATG GTGC                 TATTGCTGAAATATA  43 97
ISU54_RS04185 1006424 .. 1006435 +  -5.8   -4.2717   AAATGTTGGGAAGCC                GTGC CCTT GCAC                 TTTTGCTAGCATGGT  68 122
ISU54_RS04200 1009173 .. 1009187 +  -4.2  -3.40597   ATATCCTTGTTACTT               GAGATC GCC GTTCTC               TCTTTACCTGAAGCA  52 235
ISU54_RS04205 1010520 .. 1010535 +  -3.2  -3.64142   ATGACTGTTGCCAGA              CGCTGT TGGA AAAGCG               TTGTCTGCTGTTTTA  49 53
        lysA 1013248 .. 1013283 +  -6.1   -2.7185   GTAGATCGGTCATTG    CCTGC-TCACCGCCGA GTTCG TCGGGGGTGCCGTAGG    TAATTAAACGCTCAT  51 366
ISU54_RS04225 1016814 .. 1016831 + -11.3  -6.11644   TTTTATTTGCACCGA             CCTACGC AGAT GCGTAGG              TTTTTTTTTAGGTAC 100 342
         aas NONE
        lplT 1020346 .. 1020356 +  -5.4  -2.72661   TGTCATCTGAAAGGA                 TCTC AAG GAGA                 TCCTTCAGACTGCTG  49 52
ISU54_RS04245 1021233 .. 1021248 + -11.8  -3.43203   TGTCAATAACCTCAA              GGCCGC ATCA GCGGCC               TTCATATTATGATAG  91 347
        rppH NONE
        ptsP 1026990 .. 1027007 +  -2.8  -3.91488   ACACCGCTGCAATAT             CAATTA AGAAGG TAATTG              TTGTTTACAGAACTT  54 146
         lgt NONE
        thyA 1028803 .. 1028821 +  -8.8  -4.36485   ATTTAATCTTCATAT             CGGAGCTG TAA TGGCTCCG             TTTTGCGTCTTTTAT  86 35
ISU54_RS04280 1029578 .. 1029593 +  -4.7  -3.80014   CAACAATCCATGGCA              GGCAT CCATTT ATGCC               TTTAGTGGTCAATGT  59 5
ISU54_RS04285 NONE
ISU54_RS04290 NONE
ISU54_RS04295 NONE
        recC 1034563 .. 1034575 +  -2.6  -3.84808   GCTCGCCATAATAAG                GCGT GAAGA GCGC                TTGTTGTCAGTTCAA  52 20
        ptrA NONE
        recB NONE
        recD 1043154 .. 1043175 + -11.6  -3.76634   TAAATCGCCAATAAT           CTCAGGGC ATAAGC GCCCTGAG            TTATCTGTTTCAAAT  95 27
ISU54_RS04325 1046304 .. 1046317 +  -8.1  -2.84192   CCAGAAACAAAAAAA               CACCC GATA GGGTG                TCTAATGATGATATC  61 211
        mltA 1048051 .. 1048066 + -11.8  -4.20084   ATTTGTTTTGATTAA              GCGGCC AGTT GGCCGC               TTTTGCATGAGTACT 100 64
        tcdA 1049150 .. 1049163 +  -3.8  -4.13767   GGGGTCTGCGGCCAG               CACC TGTTGT GGTG                TTTTACCCTCCACGG  61 193
ISU54_RS04360 1051212 .. 1051224 +  -7.7  -3.00022   AAGTGAAAAAAAGCA                GTAGC TTA GCTAC                TATGTCTGGCATACC  62 240
ISU54_RS04365 1052380 .. 1052394 +  -2.8   -2.6834   GTTATGAAAACTGAT               CAATCA TAA TGTTTG               GTTAATTGTAATGCT  41 27
ISU54_RS04370 NONE
        rlmM 1054251 .. 1054274 + -14.6  -4.90455   GGGTTTGTCAGCAGT          CTGAGGGGCC TATT GGCCCCTTAG           TTTTTATGCGTATAT 100 238
         syd 1060347 .. 1060377 +  -6.9  -3.94648   GTGTTACTGGTGTGC       GAGATCTCTCACA CCAGC TGTGAGACATCAC       TTCTATTCTTTCTAT  69 64
ISU54_RS04410 1061526 .. 1061566 + -11.9  -6.17669   AGAGCCTTATAGGCG  CATATGAAAAACCTCCGGC TAT GCCGGAGGATATTTATTTG  TTTTTTTGTTTTGTT 100 95
ISU54_RS04415 NONE
        truC NONE
ISU54_RS04425 1063315 .. 1063346 + -12.5  -3.14878   ATCTTGATTTTATTG      CGTATTGTGGCAA GTTTCG TTGTCACAATACG       TATTCGGTTACCGAG  93 48
        rpsB 1069642 .. 1069660 +   -16  -3.74792   AAATATGTTGGTTAG             GGGGGCCT TAT AGGCCCCC             TTTGCATATCTAATG 100 81
         tsf 1070581 .. 1070604 + -12.4  -4.68384   TCTTAATGCTCCAAA          TGGGGCCGCC AATA GGCGGTTCCA           TTTTATTCACTCGAT 100 35
        pyrH 1071558 .. 1071571 +  -4.5   -4.2074   TGTCTGCCCCTTTAG               CCAGC AACT GTTGG                TTTGTATATTCACCG  63 78
         frr 1072213 .. 1072242 + -11.5  -5.44721   ATCTCTACTCGCATT       GTATAAGCGTCGCC TTA GGCGGCGCTT-TGC       TTTTTTTCCGGTCAT 100 40
        ispC 1073743 .. 1073762 +  -8.6  -5.63504   GCTGTCACTCCAGAA            GCCGTG-AC TTG GTACACGGC            TTTTTTTGTGCACTT 100 160
        ispU NONE
        cdsA NONE
        rseP 1076819 .. 1076842 +  -2.3  -2.52464   CACTTTTCAATGATT          TCTCCCGTC TTTAAC GGCAGGGGA           TAGGTTAGGAAGAAC  39 12
        bamA 1079318 .. 1079337 +  -3.5  -3.16683   AAAGGATCTTAAGTC            GCGTTGG TGAAAT CTGACGC             TTCATCAGGTGGGAT  48 87
         skp NONE
        lpxD 1081060 .. 1081072 +  -2.7  -5.00616   GTGCAGGCCGTGTTG                TTGAT AGC ATCAG                TTTTTTAGACAGGAA  70 148
        fabZ NONE
        lpxA NONE
        lpxB NONE
        rnhB NONE
        dnaE NONE
        accA 1088838 .. 1088860 +  -5.5  -6.08563   GCCAACTGATAAAAG           CCGGTGC GGAATTTAA GCGCCGG           TTTTTTTTATCTATT 100 48
ISU54_RS04535 NONE
        tilS 1090984 .. 1090997 +  -2.3  -3.80855   GGGTTTGTCCGTTGT               CTGGA AGAG TCCCG                TTAATTTTTGAGGAG  51 228
ISU54_RS04545 1091557 .. 1091578 + -11.5  -4.56597   AGGATAAATGCAAAA           CGGGCCGCT CTTC AGCGACCCG            TTTTTCACAAGGAAG 100 247
ISU54_RS04560 NONE
        arfB NONE
        nlpE 1094222 .. 1094233 +  -5.8  -5.09762   ATCATTTGTTTCTCA                CCGA CGCG TCGG                 TTTTTGTATTCCACT  86 223
        gmhB 1100861 .. 1100890 +  -2.9   -3.5393   GAGTGACCAAAGCAG       TAAACATTTTGAC TCCG GTCAGAATGCCTA        TTTGCAGAAAGTAAT  48 368
ISU54_RS04610 1102618 .. 1102628 +  -3.2  -2.86202   GAAACGGTTGAATTT                 CGGT TTG ATCG                 GTATTTTCGTGTCCC  43 141
ISU54_RS04615 1102766 .. 1102803 +  -7.9  -3.45839   TTATGAACTGAAAAA   TAACGTAAAGATGACTT TACC AAGTCGTGTTTACGATA    TTGCTCTTTAACAAT  68 77
ISU54_RS04620 1105878 .. 1105888 +  -6.8  -4.27316   GGCTTAACCTTACAA                 CACC GAA GGTG                 TTTTGAATTGAGAGA  74 30
         rrf 1106159 .. 1106179 +  -6.7  -2.59683   GCCAAAAGCGGTTTT            GCACAGCGC GGA GCGCTGGCC            CTTATAGGGTAAAGT  56 86
ISU54_RS04630 1106313 .. 1106333 + -14.1  -5.24449   CCACTTATTGCAAAA            CCCTGAATC TTA GATTCAGGG            TTTTTTGCATTTATA 100 38
        dkgB 1107487 .. 1107505 +  -9.6  -5.83211   AAGACACTGGACGAG             CCACCTTA CAT TGAGGTGG             TTTTTTATTTTGGTG 100 50
ISU54_RS04645 1109109 .. 1109124 +    -9  -4.60889   TCCAACCATAAAAAA              GCACCT CGAA AGGTGC               TTTTTGACAGTGATT 100 30
ISU54_RS04660 1112363 .. 1112383 +  -2.4  -5.11033   GCGCACTGGCTTACG            ATCGGCTG TTTTC CAGCCGCG            TTTTTTCCAGTTATG  74 263
        dnaQ 1113511 .. 1113529 +  -2.4  -3.03159   AAACTGTGCAAATGG             CTTATTTC ACT GGAAAAAG             TGTTGACGCCATTCC  42 58
ISU54_RS04675 1113678 .. 1113704 + -15.3  -4.18303   CGCCAAAATTTAGAA         GCCCTGAGTTA AGTAA TAACTCAGGGC         TTTGTCGTTTCTGCT 100 36
ISU54_RS04685 1116111 .. 1116126 +  -4.6  -4.37092   CGGGGGGCCATTACT              CCACGC TGAA GCGTCG               TTTTATAACGGCCCT  66 374
ISU54_RS04705 NONE
ISU54_RS04710 1118920 .. 1118949 +  -2.9  -3.53761   AAGTCATTCATCGTA       TGGTCTTAGTG GGATTTAG TGCTAAGGCCA        TTTAACAAGAAATTA  48 89
ISU54_RS04740 1123880 .. 1123900 +  -4.7  -3.64703   TGCCAAAAAGAGCAC            TGCATGCAT ATA GTGCATGAA            TTTGCATGCAACGCC  57 6
ISU54_RS04775 NONE
ISU54_RS04780 1130816 .. 1130836 +  -5.4  -5.56673   GAGCAGGCAAAAAAG            TAAGGCAC AATCA GCGCCTTA            TTTTTTGTTGTCACT  87 23
        grpE 1134806 .. 1134827 +  -9.4  -3.92694   CAAATTGCTAACAAA           GTCCTGGC CTCCTA GCCGGGAC            TTTGCTCTAATTTTA  83 77
        sdhC NONE
        sdhD NONE
        sdhA NONE
ISU54_RS04825 1140254 .. 1140275 + -12.3  -2.53263   ATGTGAGTTTATTAA           CCCGGAGAG GGGA TTCTCCGGG            TAGCTTCACGGTAGG  86 164
        sucA NONE
        odhB 1144568 .. 1144586 +  -5.2  -3.85817   AAGATAACTGACAAA             GCTGGTCT TGA GGATCGGC             TTTATCCAGAACACT  61 62
        sucC NONE
        sucD 1146729 .. 1146746 + -12.7    -5.252   CTAACGCGACATACT             GGCCACC TTTT GGTGGCC              TTTTTTATACAAATG 100 72
        cydA NONE
        cydB NONE
        cydX 1150299 .. 1150311 +  -3.3  -2.96538   AAGCCGCTAACAATG                GCAAC GAC GATGC                TGTCTGATAAGTTGT  44 6
        ybgE 1150618 .. 1150639 +  -8.7  -4.36586   TGAGCACAATCCTAC           CTATGGGCC ATCC GGCCCATAA            TTATTTTCGTTCTAT  86 48
        ybgC NONE
        tolQ NONE
        tolR 1152260 .. 1152306 +  -2.2  -3.92577   AACCGATATAAATTT GCGTTGATATTGGTTGGGCTAA TCG TTAGCTCAACCCGTAGATACCC TGTTTTTAGCAGTTC  53 30
        tolA 1153552 .. 1153562 +    -4  -2.53164   TTGATTGACAGGGTG                 TAAC GTT GTTA                 GTTAATGATGGATCA  45 44
        tolB NONE
         pal NONE
        cpoB 1156331 .. 1156365 + -14.4   -4.0162   CTTTAGCTTTTTTGA     GCCCAGGATTTAGTCA ATT TGACTGATTTCTGGGC     TTTATCGTGTGAAGA 100 35
ISU54_RS04905 NONE
ISU54_RS04910 NONE
ISU54_RS04915 1157045 .. 1157055 +  -5.4  -4.54026   TTTGGCGACTTTTTG                 CCAA ATA TTGG                 TTATTTTGTTTAGGA  70 213
        nadA 1158294 .. 1158307 +  -2.5  -2.63079   GATGAGCAAGAGACT               TTTAT TTTA ATAAA                TCAGTTCTATCGGCA  41 101
ISU54_RS04925 1159105 .. 1159125 +  -4.7  -4.10953   TAGCATAAATACGGT            TCAAATCAG TTC CTGATTCGG            TTTCGTTTACTGCCT  63 65
        aroG 1161750 .. 1161773 +  -7.5  -5.62219   GCCGTCAATAAAAAA          CCCCG-ACAT TATTC ATGTACGGGG          TTTTTTTACTGTGTT 100 156
ISU54_RS04990 1172089 .. 1172112 +  -7.4  -5.04175   TCTCTGATTTCTGAA          TGCCTGGCGT ATAA ACGTTGGGCA           TTTTTGTATCATTCC  89 76
        modA NONE
        modB NONE
        modC 1175088 .. 1175098 +  -2.4  -3.36452   CAACCCACTGTTGGA                 GGCG TTT CCCC                 TTGCTGTTCCCCGCT  46 293
         pgl 1177089 .. 1177101 +  -4.7  -2.62263   ATGTCTAAATTGACG                GCGAC TGT GGCGC                TGATGTCGCAGAGAT  48 122
        bioB NONE
        bioF NONE
        bioC NONE
        bioD 1182392 .. 1182427 +  -4.7  -3.41234   GCGCCGCGGCCCTGA    GG-TTGCTCAGCGGGC TAAAT GCTCGCTAATCAAGCC    TTCATTCAATTGATC  55 171
        uvrB 1186247 .. 1186274 +  -2.8  -3.87994   AAGTTTATCTCGCTG        CTTTAAGGT-TTG CTT CAGCGCCTTAAGG        TTTATCGAGATGCCT  52 59
ISU54_RS05055 1186785 .. 1186797 +  -2.7  -4.87133   ATTACGTGTATTCCA                TCTAT TTT ATGGA                TTTTATTTACGCCAT  67 60
        moaA 1189341 .. 1189354 +  -5.3  -2.71144   ATTAGCGCCGATGAG               CTTAC ATCA GTAAG                TGATTCGGGCAAGTG  49 50
        moaC NONE
        moaD NONE
        moaE 1190686 .. 1190703 +  -7.7  -3.51475   CTTAAAAAGACGGTG             GGCTGTC AGTC GATAGCC              TGTATTTATTATTTA  68 118
ISU54_RS05085 1191509 .. 1191529 + -11.2  -5.18726   GTTTGAGATAGTAAA            GGACACCA AAATC TGGTGTCC            TTTTTGTTGTGCCCA 100 88
ISU54_RS05090 1192217 .. 1192241 +  -9.9  -4.55697   ATAGGCGCATATGAA          AAACCTCCGGC TAT GCCGGAGGATA          TTTATTTATCAAAAT 100 103
ISU54_RS05095 1193502 .. 1193545 +   -14  -3.63744   ACGTATTTAGACTAT CTCTTTGGCAATGTCCATTT TCAT AAATGGGCATTGCCCATGGG TATTTTACCACACGA 100 44
        dusC 1194785 .. 1194797 +  -2.7  -4.81306   ACGTATTGCCGAGAG                TAACG CTA TGTTA                TTGTTTTTTCTTGCG  67 89
        pbpG 1196272 .. 1196301 +   -13   -3.7791   CATCGCGACTGAGAA       GCGGAATTTGCT AGCAGA GGCAAATTCCGC        TTTAGTGACTAATTG 100 49
        cyaB 1199293 .. 1199307 +  -2.7  -5.34365   ATACTCAAACGCCAA               CACGC CATTA GCGCG               TTTTTCTTCTTATCG  76 488
ISU54_RS05130 1200594 .. 1200605 +  -2.2  -3.97674   ATCATATTTTCTCCC                CGCGC CAA GC-CG                TTATTTAGGTGATAC  53 6
ISU54_RS05135 1201154 .. 1201171 +  -4.8  -4.62069   TAAACACACGAAAAA             GGTGGC TATTTT GTCACC              TTTTTCACATGCAAC  71 133
        phnC NONE
        phnD 1203081 .. 1203102 +  -8.7  -4.46215   ACGGATAAAACAACA           TGGCTCTGG TTCG CCGGAGCTA            TTGTTTTTAGGTGTA  93 50
        phnE NONE
        phnE 1205071 .. 1205086 +    -4  -4.94243   CAATACTGCCCGCTA              GA-CGTC AAA GACGCTC              TTTTAGTTTTTTTGC  74 193
ISU54_RS05160 1205865 .. 1205889 +  -6.4  -4.31085   CTGTTAGTAAAAAAA          CAGGTGTGGT AATCC GCCATGCCTG          TTTTAGATTAATATA  72 268
        urtA 1207497 .. 1207528 + -10.9  -4.57837   GGTAATCGCTGTGAC      GTGCTGATGTCAG CGGGAT CTGACGTCAGCTC       TTTTTCACCACATAT 100 85
        urtB NONE
        urtC NONE
        urtD NONE
        urtE 1211842 .. 1211858 +  -6.5  -3.70076   GGAACATGATGATGT              TCGCCGT TTG GTGGCGA              TTTAGCTCCATTTAG  63 4
ISU54_RS05190 NONE
ISU54_RS05195 1214403 .. 1214421 +  -8.1  -3.83026   ATGAGTCATGTCAGT             GGCTGGT GGTGA GCCAGCC             TTTGGTATCACGCCA  72 154
ISU54_RS05205 NONE
ISU54_RS05210 1217007 .. 1217031 +  -4.3  -2.81535   AGCTTATTCGTTTTA          TGGTGCTAT TCGTTTC ATGGCGCCA          TCCGTTTTATGGTGC  46 81
ISU54_RS05215 NONE
ISU54_RS05220 1219400 .. 1219412 +  -5.5  -2.71322   AAAGATCCTCTGTGT                TGGGC GCT GCTCA                TCCTGTGTGGGTTGG  49 124
ISU54_RS05225 1220114 .. 1220130 +  -2.9  -3.24188   GAACGACACTCTCTT              TCTGCTC CCC GAACGGA              TTAATGATGCTATCA  46 5
        adiC NONE
ISU54_RS05235 1224686 .. 1224705 +    -5  -3.61404   GAATTATAGTCCGTT            CGCGGTATG AAA CA-ACCGTG            TTATATAATTGCTAC  57 395
        dinG 1229915 .. 1229939 +  -5.5  -3.06796   GATTCCAATGATCTG          CCGCCCCTTCC AAT GTCAGTGGCGG          TTCGCTGAAATCAGG  51 311
ISU54_RS05265 1232251 .. 1232278 +   -15   -4.0342   TGGGCTGACGGAAAA        GGGCGCAT-TCCT ATC AGGATATGCGCCC        TTATTATTGCTTACG 100 237
ISU54_RS05275 1235342 .. 1235363 +   -13  -3.20207   ATGTTAATATTTAGC           CCAGGCGC GGAATA GCGCCTGG            TTAATGAGTGCTATT  95 51
        gyrA 1244008 .. 1244053 +  -7.8   -5.3236   TGTCATTAAAAAACA GCCAGC-CAGTGAGCTTAAC GCCCATCA GTTAAGCA-ACTGAGCTGGC TTTTTTATCGGTTAT 100 114
        rcsC 1247306 .. 1247317 +    -3  -4.35017   TAGTTTGGCTACGCT                TTCA GGAG TGAA                 TTTCTTCCCTTTTTG  61 351
ISU54_RS05335 1253821 .. 1253846 + -15.5  -3.78934   GTGTGAGTCCTGAGA         GAAACGCGGTC ATTC GGCCGCGTTTC          TTATTGTGCCCAGAA 100 53
ISU54_RS05340 1254533 .. 1254553 + -12.5  -3.76219   AGGCGCATATGAAAA            ACCTCCGGC TAT GCCGGAGGA            TATTTATTGTGAGCT 100 105
ISU54_RS05345 NONE
ISU54_RS05350 1255064 .. 1255088 +  -9.4  -5.15526   GGCACCAATTAAAAA          CCTGTTATCT GAATA AGATAACGGG          TTTTTGCTTTTCTCT 100 34
ISU54_RS05365 1259745 .. 1259759 +  -9.2  -3.09516   CCTGAGCTTGTAAGG               CGGCTG AAG CGGCCG               TTGACTCCTGCACCA  65 155
ISU54_RS05390 1265029 .. 1265046 +  -5.7   -4.2354   AACATTAAGTTAAAT             TGAATTT TCAT AAATTCA              TTATTTTAAAATTTG  68 126
ISU54_RS05395 1266625 .. 1266640 +  -6.8  -3.97947   CAATATTAGCGTCAA              GCTGCC TGAC GGTAGC               TTTCTGGTCACTCCG  69 207
ISU54_RS05405 NONE
ISU54_RS05410 1268763 .. 1268789 +  -8.1  -5.30189   TGTATAGCTAACTGT        GATAGGCCACAC TTCG GTGTGGC-TGTC         TTTTTTCATCTTATA 100 54
ISU54_RS05415 1269693 .. 1269729 +  -5.2  -3.50877   CATTATTAATCAGGA   GAGCCACG-ATGACATT TATT GATGTCAGGCGTCGCTC    ATTTTTATCGGGTGA  57 63
ISU54_RS05420 NONE
ISU54_RS05425 NONE
ISU54_RS05430 1272002 .. 1272017 +  -2.4  -3.57144   GTTCTCAATCAATTC              CGCCTG CAAG CGGCCG               TTTAACCATAAAAAA  47 5
ISU54_RS05435 NONE
ISU54_RS05440 1272733 .. 1272774 +  -8.7  -2.54193   TGACGTCACTTACTA CTATAGCT-GGGGGCCGGGC GAT GCCTGGTCCCTGACCTACAG TGGATTAAGGTGGTG  65 45
ISU54_RS05445 1274539 .. 1274552 +  -9.5   -5.4387   GTCAATAACCTCGAA               CCCGC TCCA GCGGG                TTTTTTACTTTCTGT 100 237
ISU54_RS05450 NONE
ISU54_RS05455 NONE
ISU54_RS05460 NONE
ISU54_RS05465 NONE
ISU54_RS05470 NONE
ISU54_RS05475 NONE
ISU54_RS05480 1279875 .. 1279891 +  -4.4  -2.74488   TTTCAGTGTGTCTAT             C-TGGCG GCCA CGCCAAG              TACTTCGGGTCATTA  46 43
ISU54_RS05485 1280830 .. 1280847 +  -9.8  -3.15999   GAATTAATAAATATA             CCGGGC AATTAC GCCCGG              TTAGCTATCTACAAA  74 122
ISU54_RS05490 1282023 .. 1282033 +  -5.4  -3.54638   GATACTTTCCATTTA                 TAGG GCA CCTA                 TTTGCCCGCAGTTAT  57 277
ISU54_RS05495 1283544 .. 1283565 + -12.3   -4.8143   TTGAATTCAAGAAGG           CCGTTCACC CTTT GGTGAGCGG            TTTTTACCTTGTTAC 100 71
        yejK 1290565 .. 1290594 + -18.1  -3.28712   TGCGTATTTAGCCAA       TAAAAAACGCCGC ATCA GCGGCGTTTTTTA        TTGTGCCCAGAAAAC 100 51
ISU54_RS05545 1291276 .. 1291300 +  -9.9  -4.42806   ATAGGCGCATATGAA          AAACCTCCGGC TAT GCCGGAGGATA          TTTATTTCGGCGTCC 100 103
        rsuA 1294748 .. 1294764 +  -7.9  -3.42841   CAGAAGAGATCGCCA              GCGTGGG TGC CCCACAC              TTGTAATGAGATTGT  68 3
ISU54_RS05565 1296394 .. 1296410 +  -2.2  -4.37763   TAATGAGCCTTACCC              CTAAGG TTCAC CCTGAG              TGTTTTTTTCGCTAC  58 331
ISU54_RS05570 1297399 .. 1297420 +  -5.8   -4.9792   TACTTTTTAGCTGTT           TGTCCGTG TGCTAT CGCGGGCA            TTTTTGTCTAGGCTA  82 41
ISU54_RS05615 1309656 .. 1309688 + -15.1  -2.75975   AAACGCCAACAATAC      CGATGAGCTGAAT AGCCTTG ATTCAGCTCATCG      TCGTGTGTCTTAAGC 100 127
        uxuA 1312983 .. 1312995 + -10.5  -3.05844   AGATAACCGTTAAGG                GCCGG TTT CCGGC                TCTTAACGTAGAGAG  76 60
ISU54_RS05640 1315629 .. 1315643 +  -5.6  -4.14243   CTGGAAGCGGTGACT               GCGCCT TAA ATGCGC               TTTTACGATCGGCTG  68 17
ISU54_RS05660 NONE
        xylB NONE
        rpiA NONE
ISU54_RS05675 NONE
ISU54_RS05680 NONE
ISU54_RS05685 1327037 .. 1327056 +  -4.9  -3.62597   CGGTATGTTTGCCTT            CCTCACG CCAGGT CGCGAGG             TTATTACACAATGCG  54 362
        fruB NONE
        fruK NONE
        fruA 1331372 .. 1331397 + -13.4  -5.30686   GTCAGCAGTCTGAAA         TGCCAGTCAG TTAATT CTGACTGGCA          TTTTTTATGGGTGTT 100 84
ISU54_RS05710 NONE
ISU54_RS05715 1333149 .. 1333171 +  -6.4  -3.01912   GAAACTGGTGTTTCG           GGGAAAATAG GAT TTATTTTCTC           TATCTATAGGTCTGC  56 407
        psaA 1333801 .. 1333834 + -14.1  -3.70836   TAAATAACGAGTAAT     CATAGAACATGATGG CTTG CTGTCATGTTCTATG      TATGTTTTTGTTATT 100 38
        psaB 1334750 .. 1334785 +  -9.4  -2.56908   AAGTTTCTATTTATA    TTTTTCAGAA-AATACC TGG GGTATTATTTTGAAAAA    ATTAATAGTTCAATT  68 39
        psaC 1337344 .. 1337368 + -11.4   -4.4715   TCCCGTCAGGTTCAA          TTCCCGCCAG GTTTA CTGGCGGGCA          TTTTCTACGTTACAA 100 78
ISU54_RS05745 1341223 .. 1341246 +  -3.1  -4.41633   CTGGCTATCCGAGCC          GGTGAGATT TGTTAC AATCCCGCC           TTATTTTTAAGGGTG  63 231
ISU54_RS05750 1342817 .. 1342836 + -12.2  -4.01902   AACGTGCGGATGAAA            GGGCGATA ACGC TATCGCCC             TTCTTTAGTGCCTAT 100 56
        yiuA NONE
ISU54_RS05760 NONE
ISU54_RS05765 1346454 .. 1346473 +  -5.7  -4.07568   ACAAATGATATTTCT            CACCTGCC CGTCA GGC-GGTG            TTTTCGCGAGAAAAA  66 200
ISU54_RS05770 1348712 .. 1348760 + -12.8  -3.04517   AGCTGAGCGCACTTA CCCGAATCACTTACTGGTTGTTG ACTT TAA-AATAAGTAAGTGATTCGGG ATTTTGACCAGCAAT  95 201
ISU54_RS05785 1351865 .. 1351918 +  -3.7  -3.08679   CGTTTGCTGGCTGCC TACCTACCACTCCAATAACTTTGGG CATG CCCTTGGTCCTTGAAGTGGTAGGGG TGTTAGCTGCGCGCA  48 106
ISU54_RS05790 NONE
ISU54_RS05795 NONE
ISU54_RS05800 NONE
ISU54_RS05805 1356149 .. 1356190 + -24.1  -3.86346   CTTAAAAATCCATAA CATCCTAAAAAGCGCGATG TGAC TATCGCGCTTTTTAGGATG  TTTCTCAGGGGATAA 100 147
ISU54_RS05845 NONE
ISU54_RS05850 1366372 .. 1366401 + -11.3  -2.96792   GTGTCCGAATAAAGA       CAGTGTGCCGCAG ATAT CAGCGGCACGCGG        CTATTTTCTCTATTT  83 88
        potF 1367959 .. 1367973 +  -3.5  -3.97209   TGATGAATGGATAGG               GTGCG GCTGA CGTAC               TTTACTGTTCATTCA  58 48
        potG 1369229 .. 1369240 +    -3  -3.61652   GACAGTTGCGTGGTT                TTAG GGAG CTAA                 TTAATTGTTTGGGGA  51 14
        potH NONE
        potI 1371106 .. 1371129 + -15.4  -3.30124   GTCTTTCGTCTCCTT          TAACGCCGCT TTAG AGCGGCGTTA           TTGTGAGAGATAACA 100 59
ISU54_RS05875 NONE
        rlmC 1373365 .. 1373382 +  -4.1  -3.84451   CTTTTTGCCTTTCAG             GTCAGCA AAAG TGCTGAA              TTTACCTTTCGGGGC  57 515
ISU54_RS05890 1374359 .. 1374372 +  -2.3  -4.86621   GAGTGATTTTTTATT               ATCCC GCTC GGGAG                TTTTTCATTAAAAAT  66 173
ISU54_RS05895 1375507 .. 1375542 + -11.8  -5.35459   ATCAATAAATCTGAA    GCCCACTTCCCCATGG AGAT TCGTGGTGTAGTGGGC     TTTTTTATCATCTGT 100 54
ISU54_RS05900 NONE
ISU54_RS05905 NONE
ISU54_RS05910 NONE
ISU54_RS05915 NONE
ISU54_RS05920 NONE
ISU54_RS05925 NONE
ISU54_RS05930 NONE
ISU54_RS05935 1381937 .. 1381973 +    -8  -2.59564   CGGGGCGTTAAGGAA    ACCGGATCATCACGCA ATTTC TGGTTGATGATCCGGC    GTTGTCGCATAAGGG  58 153
ISU54_RS06015 1398647 .. 1398664 +  -2.7  -4.29738   AATTTATTTTTTTTC             TTGGC CCGATAAC GCCAA              TTTTGATAGATATGA  61 367
        macA NONE
        macB 1402838 .. 1402859 + -10.9  -4.18494   TAGATAAAATAAAAA           TGCCAGTCG TCAT TGACTGGCA            TTTTGAATCAAAGTA  93 176
        clpS NONE
        clpA 1406328 .. 1406355 + -10.7  -5.18726   ATCCAGTAAAATAAA        GGGCGATA-GCT AAAAC AGCGTATCGCCC        TTTTTATTGTGCCCA 100 139
ISU54_RS06050 1407045 .. 1407065 + -12.5   -3.6761   AGGCGCATATGAAAA            ACCTCCGGC TAT GCCGGAGGA            TATTTATTGCCAACG 100 105
         lrp 1414883 .. 1414909 + -15.2  -3.14463   TTATTCATACAGTTT         CAACGCCGGGGA GGC TTCTCGGCGTTG         TTGCTCAGACCCGTT 100 83
ISU54_RS06085 1418855 .. 1418869 +  -5.7  -3.52204   TTCTGGCACCACCAC               CCCAT GAGTA ATGGG               TTACTTTCGCGGTAG  59 15
        lolA NONE
ISU54_RS06095 1421049 .. 1421069 +  -5.5  -4.09108   GTAAGGTTAGCATTA            TAACTACTT GGT AAGTGGTTG            TTTATATCGCTTACG  65 54
        serS 1422621 .. 1422643 +  -4.9  -5.76633   GTTATCTGCTATTTC          G-AAAGCGTC TACG GGCGCTTTTC           TTTTTTTGTGTATCC  95 92
ISU54_RS06130 1428529 .. 1428549 + -11.1  -3.97088   CTCTGAATGAATAAA            GGCCCCACA ATA TGTGGAGCC            TTTCATGTTGTAACA  90 89
        ansB 1435440 .. 1435467 + -13.6  -3.53343   TTGATACTGTGACTT        TTTTGCGAAGGC TACG GTCTTCGCAAAA         TTTCCGCCAGACATT 100 37
ISU54_RS06155 1436773 .. 1436783 +  -3.2  -3.40867   TGTTGCAGCGGGTTT                 TGCT TTT GGCA                 TTAATTAATGAATAA  49 7
ISU54_RS06160 1438761 .. 1438775 +  -8.6  -3.86015   CAAGCAGCGTTCAAA               TCTGCT CCC AGCAGA               TTTGTCACCCCAGTC  75 127
        serC 1440106 .. 1440153 +  -9.8  -3.02511   TTTGAACGCCGCCAT GGCTGATTTTTCTGGAGCGGGT ACTC ATCCGCTCCGGATCGATGGGCC TCTTGCAACAATGAG  73 20
        aroA 1441814 .. 1441848 + -15.9  -3.64703   CAGCGTATAATGCTA    CCTCTGTGTCTGCCCT GCCG GGGGCAGACA-AGAGG     TTTGCCTACCGAAAG 100 279
         cmk 1442601 .. 1442611 +  -2.6  -3.68936   CGCTCTCAATACGAT                 TTTT TTA AAAA                 TTATTAAAATTAATA  50 61
        rpsA NONE
        ihfB 1444803 .. 1444822 +  -7.1  -5.81412   AACGCTGATACGAAA            CGGTGCC CTTATC GGCATCG             TTTTTTTTGCGTAAA 100 71
ISU54_RS06190 NONE
        msbA NONE
        lpxK 1450404 .. 1450435 +   -11  -3.18681   AGTTTGAGGGCGGCT      GCACATTCAGCAACG GAA CGTTGCTGGGT-TGC      TTCGTAGAGTTGCAG  76 67
ISU54_RS06210 1452775 .. 1452795 + -12.6  -4.00468   CGCTTTCTAAGCAAA            CGGCTACC TCATC GGTAGCCG            TTTCTCCCTTCTCGT 100 31
ISU54_RS06215 1453494 .. 1453509 +  -2.6  -2.90075   ATTGATGAGAAGCAC              GCA-TGA GTT TCATTGC              TATAATTCCCGCCCG  42 20
        kdsB 1454269 .. 1454293 + -12.1  -4.15703   GCGACGGAAACTTTA          CGCCAGAACCT ACC GGGCTCTGGCG          TTGTTATTTCTAACC 100 46
ISU54_RS06225 1455911 .. 1455922 +  -4.4  -3.53733   CTGGGGATTGACACG                GTTG CCGC CAAC                 TCTTTATCAGCTAAC  52 432
        cmoM NONE
        mukF NONE
        mukE NONE
        mukB 1463629 .. 1463647 +   -16  -3.07307   ATTGTGCCCAGAAAA             CCCCCAGC TAG GCTGGGGG             TTCAGTAAAGCTTTC 100 110
ISU54_RS06250 1464292 .. 1464324 + -11.3  -5.26918   CCTTATAGGCGCATA      TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA      TTTTTTGTAACATCT 100 99
        ldtD 1466458 .. 1466470 +  -2.6   -4.7254   TAACGCACAGTGAAT                GCGG GTTGA CTGC                TTTTTCATAGGCGGT  64 125
ISU54_RS06260 NONE
ISU54_RS06265 1467934 .. 1467959 + -12.7  -3.53929   ATGAATGTTCAATAG         CAAAAGATGCC GGAA GGCGTCTTTTG          TGTTCTCTTTCGTTT 100 121
        pepN 1477744 .. 1477757 +  -2.3  -4.70879   GTAGGGAATTTAATG               CAGGG AATA CCGTG                TTTTTACGATTTGCC  63 245
        pyrD 1479305 .. 1479317 +  -4.1   -4.1043   TCGATGGGTCTAGAA                CTCAG CTA TTGAG                TTTATGATATTTCAA  61 160
ISU54_RS06305 1479989 .. 1480005 +  -2.9  -3.87608   AACAAAGAATGGTTC              CATCGTT ACC AACGGCG              CTTTTTTTGAGTGCA  54 110
       rlmKL NONE
ISU54_RS06320 NONE
        pqiA NONE
        pqiB NONE
        pqiC 1488834 .. 1488875 +  -5.9   -4.3851   TCTAAATCAGTCTAA TCCTCTTTCTCTGGTAATA ATCA TCTTGTCAGGGGAAGGGGG  TTTCTATTTAATATC  70 49
         rmf 1489275 .. 1489293 + -11.7  -4.48987   CATTATCAAGGGTAA             CCTCCGC ATTAG GCGGAGG             TTTTCATTGTGCCCA 100 53
ISU54_RS06345 1489977 .. 1490009 + -11.3  -4.72631   CCTTATAGGCGCATA      TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA      TTTTATTGCGTTAGT 100 99
ISU54_RS06370 1493896 .. 1493926 +  -6.3  -4.15453   ATCACGTAAAAACAA      TAAGGCG-ACATGA TTAA TCATATTCGCCTTA       TTTTACAATGCATTG  69 234
        matP 1497027 .. 1497045 +   -16   -4.8048   AGGATAAATAAATAT             CCTCCGGC ATA GCCGGAGG             TTTTTCATATGCGCC 100 95
ISU54_RS06405 1500636 .. 1500654 + -11.7  -3.09933   ATGAAACCGTATAAT             GGGCCAC GATGG GTGGCCC             TTGGGTACCTTAGGC  84 99
        helD 1505558 .. 1505578 + -16.9  -2.58183   ATGCTCAATACTAAA            CCCGGTGGT TGA ACCACCGGG            TGAGTTACCTATTTT 100 57
ISU54_RS06435 1507778 .. 1507801 +  -7.4  -3.29471   GTGCGGAGCCTGTAA          CTGGTGGC GAATCGAG GCCGCCAG           TTCATCTAATGAAGG  61 161
        yccX 1509739 .. 1509760 +  -5.9  -3.53012   TTGCGCGATGTTCCG           CAGGTTAAA TGCA TTTAACCGG            TTTAGGAAGCCCCGC  59 73
ISU54_RS06460 1510636 .. 1510648 +  -3.4  -2.70528   CGTCGATATCATCGT                GCAA TGTGT TTGC                TGGTATCTGGCTGAT  42 261
ISU54_RS06485 1518056 .. 1518068 +  -4.9  -3.43007   GATATGAATAAAAAC                CATAT TTG ATATG                TATATTTTAAATAAT  55 98
ISU54_RS06490 NONE
ISU54_RS06495 1520039 .. 1520052 +  -2.4  -5.07486   TTTAGTCGATATCAT               GGTT AACATG AACC                TTTTTATTAGCGGTG  68 20
ISU54_RS06500 NONE
ISU54_RS06505 NONE
ISU54_RS06510 NONE
ISU54_RS06515 NONE
ISU54_RS06520 NONE
ISU54_RS06525 NONE
ISU54_RS06530 1525122 .. 1525139 +  -4.8  -3.03124   GACATTTCTGCACTA             TGGCCT ACGGAG GGGCCA              TATTCAGAACTGAAA  50 40
ISU54_RS06535 1526459 .. 1526476 +  -5.7  -3.60525   CCATTTTTTAGCCTA             TTTTCTT ATTC AAGAAAA              TTATCTATCGATAAA  61 430
        tssB 1527539 .. 1527556 +  -2.7  -2.89447   TGGCGCCAAAAGAGG             GTTAATC CCGG GATTGGC              TGCTTGTCATTAGAA  42 21
        tssC NONE
        tssK NONE
ISU54_RS06555 NONE
ISU54_RS06560 NONE
ISU54_RS06565 1533614 .. 1533633 +  -9.2  -5.72118   ACGTTGTCATCAACT            TCAGGCGG TTCG CCGCCTGC             TTTTTTGTGTTTTTT 100 231
        tssH NONE
ISU54_RS06575 NONE
ISU54_RS06580 NONE
ISU54_RS06585 1542020 .. 1542031 +  -5.8  -3.14132   CTTATTAACTTCCGG                CTCC GGAT GGAG                 TTACTCGCCAACGAG  55 173
ISU54_RS06590 NONE
ISU54_RS06595 NONE
ISU54_RS06600 NONE
ISU54_RS06610 NONE
ISU54_RS06615 1551936 .. 1551951 +  -7.6  -2.78384   GATGAAGACATGGCA              GAAGAC TGAT GTCTTC               TATCATCCCCCCCAA  61 17
        tssA NONE
ISU54_RS06625 NONE
ISU54_RS06630 1555280 .. 1555311 +  -5.3  -4.15143   TTAAAGGCATTATTA      GAGTGGATTAATT CTCCGC AATTAAGCCATTC       TTTATCTGATTAGTT  65 170
        tssF NONE
        tssG NONE
        tssJ NONE
        tssE NONE
ISU54_RS06655 1560677 .. 1560716 + -11.4  -3.66883   ATATTATTAATTAAT  GATAGCGCTCACAGCGGGG TGA TCCTGCTG-GAGCGCGACC  TTTAAACTGTATTAA  90 134
ISU54_RS06665 1563707 .. 1563725 +   -11  -5.80248   GACCTAACAAAAAAA             GCTGATGC TAT GCGTCAGC             TTTTTTTATGTCTTC 100 51
ISU54_RS06670 1564990 .. 1565001 +  -3.6  -4.02022   CACCATTTTCAAACC                GCTG GTGA CGGC                 TTTATAGTCCTTCCA  59 453
ISU54_RS06730 1579247 .. 1579275 +  -3.7  -3.80276   TCAATTAGAGTGAGA        GCGAAATTCGGGT GTG ACCCGCATCATGC        TTGTCTTATCTGGAT  56 142
        folE NONE
ISU54_RS06740 1581624 .. 1581641 +  -6.3  -4.15044   GTAACCGGTTTCAAT             CTGTGAG AAAA TTCACAG              TTTCTTAACAACGCC  69 452
        mglB 1582986 .. 1583027 +  -8.8  -2.66291   TATAGACCCAAAATT ATTGGCG-TGCAGGAGGGC AACTG GTCCTCCTGTAGCGTCAAA TACTATGGCTATATA  66 74
        mglA 1584669 .. 1584680 +  -4.4  -2.99433   TGAAATATTACGCCT                TGCA TCCT TGCA                 TCTCTAATCTAGTTG  47 7
        mglC 1586127 .. 1586137 +  -4.6  -4.04397   AGGTGGTTCTCGAGA                 CCGG TTA TCGG                 TATTTTTGTCGCCCT  61 434
ISU54_RS06800 1597047 .. 1597073 +  -8.7  -4.77165   TTTCAATCATAAAAA        TGCCGGT-AGGG TTAC CCCAGACCGGCA         TTTTGTTGTGCCCAG 100 66
ISU54_RS06805 1597756 .. 1597788 + -11.3  -4.43208   CCTTATAGGCGCATA      TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA      TTTCTTTAAGGATCT 100 99
        apbC 1601442 .. 1601454 +  -4.8  -4.09108   TAATTGCCGCTCGAA                GCAC TTCGT GTGC                TTTGTCTCCCTTCAC  63 217
         udk 1602146 .. 1602158 +  -3.3  -4.05322   GAGTAACGTTCGTCT                GGACC TTT GCTCC                TTTATATGACAGTTT  56 35
         dcd 1602937 .. 1602964 +  -4.8  -4.63592   CGCTTTCCCTTCATT        TGACTTGGTCAG CAGT CTGGACTAGTCA         TTCTTTTTATTGAGA  71 140
        asmA 1604921 .. 1604956 +  -8.3  -4.85782   ATAGGTAGTGGAAAG    AGA-TAGGCCCGATGG TTTCT CCACCGGGCCTAATCA    TTTATTTTTCCAGGC 100 81
        fhuF 1607845 .. 1607873 +  -7.5   -3.9751   AATCTTATTAGTTAG        CCAAGTTCCTG CATTAGA CAGAAACTTGG        TTGTATTCTTTATTT  72 26
ISU54_RS06845 1609534 .. 1609549 +  -6.2  -3.59252   GACTCTCTATAACAG              TCAATC ATGA GATTGA               TGTTGTTTGATCAGG  63 16
ISU54_RS06850 NONE
ISU54_RS06855 NONE
ISU54_RS06860 1613371 .. 1613387 +    -5  -3.53444   ATAAACCAATAGACC              GGCACC GTTGA GGAGCC              TTTCAGGGCGGATGA  55 101
        galU NONE
        galU 1624661 .. 1624676 + -10.4  -4.01603   TTGGCAGTTTAGGCC              GCGCCA TTTG TGGCGC               TTTGCTCTTTGCCTA  89 104
        gndA 1626524 .. 1626548 +   -10  -5.42259   GCTGCCCAATAAAAA          CGCCTCCAGT GATAA GTTGGAGGCG          TTTTTTTGCCAGTGA 100 172
ISU54_RS06955 1635488 .. 1635505 +  -4.1  -3.46811   GATACACTTCATAAC             GGTGAGT TTTG ATTCGCC              ATTTTTGCTGATATA  50 255
ISU54_RS06985 1640111 .. 1640136 +  -7.6  -5.86332   ATACGCCGAATGAAA         TAGCCGACGT TTAAAC GCGTCGGTTA          TTTTTTTTGCATTCG 100 135
ISU54_RS06990 1641884 .. 1641907 + -11.8  -5.47159   CATTAAGTTTATCAA          TCCGGC-ACAG TCT CTGTTGCCGGA          TTTTTTGTATTCAGA 100 58
ISU54_RS07005 1645583 .. 1645598 +  -3.2  -3.15544   ATAGCGTTGACTCAC              CCCTAA ATAA TTCGGG               TTACTGAACCTAGCC  46 188
ISU54_RS07010 1646228 .. 1646250 + -11.3  -5.16841   AGGGGAAAGAGAGTG           GGGCTGGCA TCTAT TGTCAGCCC           TTTTTATTGGTGTGC 100 82
ISU54_RS07015 1647992 .. 1648014 +  -6.2   -2.7317   CGTAATGGTCACTTT           CCCTCCAGGA TTA TCCTGAAGCG           TAATTGCACCTGTGT  51 267
ISU54_RS07025 1653394 .. 1653407 +  -3.8  -3.11476   AGATAGCCTCGGAAC               GCAG ATAAAC CTGC                TGATTTTCAATCAGT  46 225
ISU54_RS07035 NONE
ISU54_RS07040 NONE
ISU54_RS07045 NONE
        lldD 1658476 .. 1658490 +  -4.9  -2.99871   GCTGTCTGATGATTT               GGCTG AATAC CGGCC               TGATTTACTGTGACA  50 86
ISU54_RS07060 NONE
ISU54_RS07075 NONE
ISU54_RS07080 1666209 .. 1666232 + -13.2  -4.15998   ACTGAAATGCAAAAA          CCCTGCTTAG TTAC CTAGGCAGGG           TTCTTTAATTTGGCT 100 337
ISU54_RS07110 1672179 .. 1672206 +  -4.7  -2.71001   GCCCATTGGACGCAA        AGTAGGCCGCC ATAAAC GGCGGCCTGAG         GTTAATTTACGGCTG  44 383
ISU54_RS07130 1677185 .. 1677221 + -12.6  -2.87881   CGGCATTAGAGTAGA   TCCGAAACGTTTCGGAT TTAA ATCT-AAACGTTTCGGA    TGTGTGACGAACTTA  89 288
ISU54_RS07140 NONE
ISU54_RS07145 NONE
ISU54_RS07150 1680485 .. 1680508 +  -9.6  -4.51196   ATAGAAAAGCAAAAA          TCCCGCTTAG TTTC CTAAACGGGA           TTTTCTAAATTTGGC  95 138
ISU54_RS07180 1686387 .. 1686401 +  -9.2  -3.56594   CTTCAAGATAGATGA               CCCGCC CTA GGTGGG               TTTCGACCCATTTAC  70 424
ISU54_RS07190 1687617 .. 1687632 +  -2.6  -2.99273   TCTTTTTTAAGAAAA              TAGACT GAAC AGTTTA               ATTTATGATGCTGAG  43 391
        mgrB 1688038 .. 1688053 +  -2.4  -3.94773   TGAGCAGCATAAGCA              CGCGTG ACTG CTTGCG               TTGATTTTTTAACTA  53 109
ISU54_RS07205 1688445 .. 1688474 + -12.9  -3.10071   ATAAACGTGTCCCGA       TGCTGGCACTACC AACA GGCAGTGTCAGCA        TGTTACCTGCAATTT  95 37
ISU54_RS07210 1689066 .. 1689086 +  -5.5  -4.28361   ACAGGAAGTCGCTAT            CAGTAAG CGTTCTT CTTACTG            TTTTCGTGGAGTTGA  68 96
ISU54_RS07215 1689525 .. 1689541 +  -3.7  -4.20367   AAAAACCGCCGCAGA              CTCATTT ATG AAATGCG              TTGTTTATTCACACC  60 201
ISU54_RS07220 1691193 .. 1691229 +  -6.8  -5.28481   AATTCGCCCTCAACC    AAGCATATAACCAT TTTAATATT ATGGTTATATGCTG    TTTTTTAGTTAAATA  89 259
ISU54_RS07230 NONE
        cspE 1693253 .. 1693268 +  -7.5  -5.32699   CGTTTGCTGTAAAAA              CCCGC CTTTGT GCGGG               TTTTTTCATATTTGG  91 45
        rlmA 1695331 .. 1695352 +  -6.5  -3.15699   GACTATTCGCTTTAT           ATCCCCTGT AGTT GCAGGGGAG            TATTGCTGAGTAAAT  57 61
ISU54_RS07260 1700802 .. 1700840 + -24.8  -3.00946   AACAGGTGCTTTACT   GAAATCCCCCGGCGATTT GAT ATATCGCCGGGGGATTTC   TCATTTATCGCGCAG 100 93
ISU54_RS07290 1707489 .. 1707516 +   -17  -3.62046   AAGCAGAGAGTGGAA        CCTCAGGGGCGC TTCG GCTCCCCTGAGG         TTATTGACAACGTAC 100 39
ISU54_RS07300 NONE
ISU54_RS07305 NONE
ISU54_RS07310 1711199 .. 1711234 +  -2.5  -3.06183   GGGAGCATCCGATCC    CCCGTTG-GGGGATGT AACAG ACATCATCGCCGCGGG    TTAAATCGCAATCAA  43 9
        hpaD NONE
ISU54_RS07320 NONE
        hpaH 1713398 .. 1713415 +  -2.6   -3.3062   TAGGTGCCATAAGTT             GCCACT TTGTTT AGGGGC              TTAGTGATGTTTCCA  46 12
        hpaI 1714232 .. 1714248 +  -3.7  -3.40899   GGTGGATATTAACCC              TGTCC GTATCGA GGACA              TTATCATGAGCGATT  51 29
        hpaX 1715632 .. 1715665 +  -2.4  -4.72007   TCTAATGGGCTAAGG    GACC--CACGCCGACA AGAA TGTCAGCGAGCCGGTC     TTTATTTTGATGACG  63 36
        hpaB NONE
        hpaC 1717771 .. 1717810 + -15.2  -3.62046   CGGTGATGGTGTAAA  CCTCTAATGCCCGTCA TATTTAAC TGACGTGCATTAGAGG   TTGTTGACAAAGTGC 100 27
ISU54_RS07365 1722578 .. 1722605 +  -8.5  -4.49958   ATTGATAGATAAAAA        TAAACCCGCTG GCTGAA TGGCGGGTTTA         TTTATTTGCTAGCGT  87 88
        dbpA NONE
ISU54_RS07380 1725914 .. 1725936 +    -2  -2.64155   AAAAGTAAACCTGAA           GAAAATCAAG CCG CTTAATTTGC           TCACTTTCGGCAGAA  40 8
ISU54_RS07385 NONE
ISU54_RS07390 1726869 .. 1726889 +  -9.7  -2.83112   AATAACCCGCTATGT            TTGAGGGCA TAT TGCCCTCCA            TCTGGTCAATTCAAT  72 98
ISU54_RS07395 1729401 .. 1729418 + -10.5  -3.05384   ATGAACAATAAAAAA             CCCGCCG ATAA TGGCGGG              TTAACTCACGAAACG  76 269
         pip 1730850 .. 1730880 +  -6.1  -3.62478   CGCATTTAAGGCGAC      TGACTCCCGCGGGT TAAG GCCTACGGGAG-CA       TTTCACGATTACTTC  63 46
        ftnA 1732050 .. 1732078 + -10.3  -4.47456   ATTGAGAAAATATTC        GCCGCGGTACT ATTATTG GGTACTGCGGC        TTTGTTGTTGCCTAT 100 46
        yobA NONE
        copD NONE
ISU54_RS07425 1734366 .. 1734393 +  -7.8  -5.77856   AGAGCCATTTCCCTA        GACCGAATATCA GGAA TCGTATTCGGTC         TTTTTTTAATTTATT 100 254
        flhB NONE
        flhA 1739195 .. 1739207 +  -3.4  -2.54098   GTATGACCTCGACGA                TAGG ATCCG CCTA                ATGTTGATTCGGGCC  42 12
ISU54_RS07450 1739998 .. 1740008 +  -2.6   -4.8048   GACTGTTTTATTATA                 TATT TTG AATA                 TTTTTAATCTGCCCA  67 393
ISU54_RS07460 1741820 .. 1741852 + -11.3  -4.26076   CCTTATAGGCGCATA      TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA      TTTTGGTAAAGATAA 100 99
        flgB NONE
        flgC NONE
        flgD 1747451 .. 1747467 +  -5.9  -3.71321   CTGGATGAAGTGCGC              CAGATTT TAT AAGTCTG              TTGTTAGGCTTTCAT  61 14
        flgE 1749003 .. 1749013 +  -6.8  -2.91681   ATACCGCAATGGGGG                 CTGC CCG GCAG                 TCTCTGGAGTTGCAG  58 78
        flgH NONE
ISU54_RS07520 NONE
        flgJ 1753307 .. 1753319 +  -6.3  -3.45433   TCTGCGACAATAACG                CCTAT TGG ATAGG                TTGGGTTTTTACACT  61 151
        flgK 1755769 .. 1755791 +  -5.5  -3.45366   ACGATATTATTGCCT          GCGAGG-GCA ATCA TGCGCCGCGC           TTAATTCATTCCAGG  57 78
        flgL 1756846 .. 1756871 +  -7.6  -3.02144   CGTAATCGGCCTTAA         CCCCGTAG CACACACAGC CTACGGGG          TCTTCGCACGGGTCA  62 36
ISU54_RS07545 1760257 .. 1760276 +  -2.8  -3.33261   TTACCGTAATTCAAA            CAGTATGG GGGT TCAAACTG             TTATGAAAGTTCAAA  46 133
ISU54_RS07550 1761352 .. 1761365 +  -2.3  -3.13403   AGTGCAATCCCCCGT               GCGCT GATG AGCGG                TGTTCCTGGGGGAAA  43 19
ISU54_RS07555 1762434 .. 1762444 +  -6.8  -3.14931   ATGCCGCTTAAGTGG                 CACG GGG CGTG                 TTGATGGAGGATCAC  59 63
ISU54_RS07560 NONE
ISU54_RS07565 NONE
ISU54_RS07570 1766191 .. 1766205 +  -2.8  -3.11072   GCCCCTTATCTTAAC               TCGCTT GAT GAGTGA               TATATGTTCAATGCG  44 144
        fliE NONE
ISU54_RS07655 NONE
ISU54_RS07660 1779848 .. 1779859 +  -2.2  -2.63073   TAAGGTGTAAATAGA                C-GCC TAT GGCAG                ATATTGTTGAAGGGA  40 31
ISU54_RS07665 1780349 .. 1780364 +  -6.1   -4.8066   CGTATGAGATATCAA              CCCAC TTAGCT GTGGG               TTTTTGCGTTATCTT  80 45
ISU54_RS07705 1789389 .. 1789404 +  -8.2  -4.69027   ATACCCTTATTCCAA              CCCTGC TGCG GCGGGG               TTTTTACCTCAGTTT  91 54
ISU54_RS07710 1790444 .. 1790487 +  -2.3  -2.94825   ATTCACGTTCAATCT GCTCCCTGCGGGGTAGTCA CCCGGA TGACTGACGCGTAGTTAGC GTTTCATTGGGATGA  42 40
        fliZ 1791199 .. 1791211 +  -3.4  -3.31144   TAGGGTATAGGTATA                GAGA GTCAA TCTC                TTATCCACATCAACG  47 64
ISU54_RS07720 1792515 .. 1792527 +  -3.4   -3.1247   TCACTTCATTAATAG                CACT GGTAA AGTG                TTGAATATCAAAAAT  46 99
        tcyJ NONE
        tcyL NONE
        yecC 1794948 .. 1794962 +   -10  -4.72272   TGTCAATAACCTCAA               CCACTG ATT CAGTGG               TTTTTGGTGGCAAAA 100 182
ISU54_RS07755 NONE
        putP 1802322 .. 1802347 + -11.2  -3.37466   ACGTTTAACTACACA         TAGCCTCCTG CCATAA CAGGGGGCTA          TCTTGTATGTAAAAT  81 67
ISU54_RS07765 NONE
ISU54_RS07770 NONE
        efeB 1805943 .. 1805965 +  -7.7   -4.8667   GAAGCTTAAAATACA           GCACCGC CATCATCGC GCGGTGC           TTTTTATGACGTCTA  91 32
ISU54_RS07785 1808278 .. 1808302 +   -10  -4.39426   GAGGGGGAAATAAAA          CGGTACCAGA ACACC TCTGGCACCG          TTTTATCACACTGTG  93 110
ISU54_RS07795 1810237 .. 1810253 +    -3  -4.70921   TCATATTCGTGCCGT              CTCTAT TCAGT ATAGGG              TTTATTTATCTTGTA  65 91
ISU54_RS07800 1811435 .. 1811461 +  -5.9  -5.18357   TCTATATAATAATAA        CAGCCGTATTAG TTCA CTG-TGCGGCTG         TTTTTTCATCAGTTG  85 51
ISU54_RS07805 1812489 .. 1812499 +  -2.4  -3.63515   AGGGGCCACTATGCT                 GGCC CTA GGCG                 TTATTGGCGGTAGCC  49 511
        uvrY NONE
        uvrC NONE
        pgsA 1816599 .. 1816612 +  -3.1  -2.73994   CGAAAGATAGCAAAA               GAATC AGTA GGTTC                TGATGTTGCGGGAAT  43 149
ISU54_RS07835 1816704 .. 1816721 +  -5.5  -3.12351   CGCTCCAAATTAATA             GGTTGGC ATTA GCGAACC              TTAGCTGTAAAGGCA  53 34
ISU54_RS07840 NONE
ISU54_RS07845 1816964 .. 1816977 +  -9.5  -5.69473   CGAGTATGTCGTTAA               CCGCC GAGA GGCGG                TTTTTTTGTGATCTA 100 72
ISU54_RS07855 1818522 .. 1818532 +  -2.4   -4.3467   ATGTGGGAGCCTTGA                 TCCG ATT CGGC                 TTTTCGTATGAGCAT  58 479
ISU54_RS07860 NONE
ISU54_RS07865 1819720 .. 1819731 +  -5.8   -3.2396   TTTCATTATTGGATA                TGGC TATA GCCA                 TTAGTGGTGATAATT  55 370
ISU54_RS07905 NONE
ISU54_RS07910 NONE
ISU54_RS07915 NONE
ISU54_RS07940 1830786 .. 1830820 + -15.3  -3.88232   GAACCTTACGCACCG    TGATGGTGCT-TTGAG TTTG CTCAAGAGCACCATCA     TTGTTCTGTAAACGA 100 449
ISU54_RS07945 1832025 .. 1832039 +  -4.2  -3.36878   CCGTACCGGCGAAAT               TGTCCG GGT CTGACA               TTCTGACTGAATAAA  51 13
ISU54_RS07950 1833335 .. 1833375 +  -9.9  -2.77192   AGCGTTGTCCCGTTA ATCGCTTTCCGTCAGTGC AGTTGC GCACTGACGGAAA-TGAA  ATTCTTACGCAGGTT  72 25
ISU54_RS07955 NONE
ISU54_RS07960 NONE
ISU54_RS07965 NONE
ISU54_RS07970 1836696 .. 1836713 +  -6.9  -3.86015   ACTACAAATTTAAAT             CCCCCTC ACAC GACGGGG              TTTGTACGAGGCCTC  67 497
ISU54_RS07985 NONE
ISU54_RS07990 1839068 .. 1839084 +  -4.4  -4.70169   CATAAAGCATTTCAA              GCTCAT TCCCT GTGAGC              TTTTCTTCCATATGC  70 155
        ybtP NONE
        ybtQ NONE
        ybtX NONE
        ybtS 1871396 .. 1871424 + -10.3  -2.72829   TGATAAAAGTCTATA        TAGAACCACCTCC TGT GGAGGTGGTGGTA        ATTTGCCAGAGTGTG  74 160
ISU54_RS08140 1888910 .. 1888921 +  -5.8  -2.87622   GCTATCAATATCCGG                CCTG CATA CAGG                 ATTATTATCCGAGTC  53 121
ISU54_RS08165 1893410 .. 1893428 +  -2.4   -2.8577   AACGTGATTAATTTA             GTGTGC AAATTCC GCATAC             ATTTAGCTATTAGGT  41 30
ISU54_RS08175 1896280 .. 1896290 +  -2.4  -3.04398   GCCAAGATGTCACTG                 GCGC ACC GGGC                 ATTTTGAAGGAGACA  42 484
ISU54_RS08190 1899845 .. 1899859 +    -5   -4.2528   GCAAGGCTATTTTAT               GTGAAG AAT TTTCAC               TTTATTGCGTTAACA  66 73
        glsA 1901278 .. 1901307 +  -4.9    -3.494   GGATATCGATGTTGT       TCTGAAAGCCAGG CGGT CTTGGCAATCAGG        TTATATCGAAAATTA  55 47
ISU54_RS08200 1903242 .. 1903274 +   -15  -5.72622   TTGAAATAAAAGTGA     CTGGCAGTGTGTTGC GAAA GCAGC-CACTGCCAG      TTTTTTCTTTCTGGC 100 260
ISU54_RS08210 1905693 .. 1905704 +  -4.4  -2.85668   GTAATTATCATTTGA                TACC AGAG GGTA                 TGTCCTATGACCATG  46 211
ISU54_RS08215 1906316 .. 1906330 +  -5.8  -4.17316   TGAAAATAAAAGTAT               TGTTTT GAG AAAACA               TTGTTTTGAGAAAAT  68 103
ISU54_RS08220 NONE
ISU54_RS08225 1909345 .. 1909371 +  -7.2  -3.62224   GTGTCAGTGTCGTCT         TTGCCGCACTGA CCG TTGGCGCGGCGA         TTGTTACCGCAATGT  68 127
ISU54_RS08235 1911091 .. 1911105 +  -7.8  -2.53382   CTTGATGAAAAGAGC               CGCCAT CAT GTGGCG               TAACTTGAAGATCAT  60 8
ISU54_RS08240 NONE
ISU54_RS08245 1912035 .. 1912053 +  -3.1  -3.83323   GATGCGGTACTATAT             GTTGCAT ATAAA ATGCATC             TTTAAGTTATCTAAG  53 154
        tehB 1913051 .. 1913081 +  -3.4  -2.60496   CAACTTAATGTCAGG       CATGTATCAATA ATAGTGG TGTTGCTACATG       ATATTTAAAAACAAA  42 110
ISU54_RS08255 1914355 .. 1914382 +  -3.4  -4.33274   GTAGCCCGGATAAAA        CAGATTCATCTA ATTT TCGCTGGATCTG         TTTTCATCGTGTCGC  61 56
        pgaA NONE
        pgaB NONE
ISU54_RS08270 NONE
        pgaD 1921689 .. 1921703 +  -2.1   -3.9712   GGGAAGGGAAGTACC               CAACG TGTGC TGTTG               TTTATAATAACGTCA  53 431
ISU54_RS08280 1922550 .. 1922567 +  -4.3  -3.43919   CTAATGCTATTTATT             TTTTTAA AAGA TTAAAAA              TATTTCGCCTTTACA  52 60
ISU54_RS08285 NONE
        phoH 1924139 .. 1924163 + -16.5  -3.92324   AGAATACACAAAAAA          GGGCAAGCGTT AAC AGCGCTTGCCC          TTTGCTATTCAGACG 100 84
ISU54_RS08310 1929757 .. 1929772 +  -6.2  -3.68908   GTGAATGCGAATATT              TTGCAT AATT ATGCAA               TTTAACTGCCTGTTT  63 438
ISU54_RS08315 1931565 .. 1931578 +  -4.5  -4.58663   TCAATGTGTATAAAT               CGGTG CCGA CACTG                TTTTTGAGCAATGAT  71 371
        astD NONE
        astB 1935181 .. 1935191 +  -4.6  -3.55444   GTTCCAGCGCAATTA                 GCCG GTG TGGC                 TTTAGCGAATAACCG  55 25
        astE 1936573 .. 1936615 +    -3  -4.55128   ATAACAATAAAATCT TAATCAGCAAAAACAAAT AATTAGG ATTTATTTTTGCTTGTTA TTTTAATTTAACCAT  63 364
ISU54_RS08345 NONE
ISU54_RS08350 1940101 .. 1940118 + -10.5  -4.80882   ATAGAAAGATAGAAA             GGCGGGG GAAA CCCCGTC              TTTTTACTGTGAGCT 100 402
ISU54_RS08375 1944754 .. 1944768 +  -2.1   -2.8619   TGGCTGTACTGAAAG              CCTGCC AACA GG-AGG               TCTGATGAGTTTTAC  41 6
ISU54_RS08380 1945622 .. 1945650 +  -5.3  -4.89477   GTCTGCTTGATGGGT        GATTTCGGTTCCG GCT CGTAATCCAAATC        TTTTATTCTTACGGG  76 302
ISU54_RS08390 NONE
ISU54_RS08395 NONE
ISU54_RS08400 NONE
ISU54_RS08405 1950957 .. 1950971 +  -6.4  -2.92951   GGTTATGCCATGAGG               GGGATT TAT GATCCC               GTTTATGACGCTCTG  56 15
ISU54_RS08410 NONE
ISU54_RS08415 NONE
ISU54_RS08420 NONE
ISU54_RS08425 NONE
ISU54_RS08430 1956410 .. 1956423 +  -5.9  -4.10161   TAGCCATGTTCGGTT               CCCTG GCTG CGGGG                TTTTAAAGGCTGCTG  68 170
ISU54_RS08445 1960127 .. 1960151 +  -5.7  -3.71353   CCATGATCAATTTTA          TGAGGTCTG ATTAATC CAGACCCCA          TTATTAAAATTATTT  61 107
ISU54_RS08455 1965227 .. 1965240 +  -4.5  -3.05384   AACTATCACATTCAA               TGGGC GACT GCTCA                TTGACTAAGAGGAGA  50 236
ISU54_RS08460 1966205 .. 1966219 +  -2.8   -3.1211   TTCTTCCCAAGACGA               TTATGC CCT GCATCA               TTGCCTAATATCGTC  44 329
ISU54_RS08520 1977373 .. 1977396 +  -5.2  -3.04144   GATACTCCCTCTCTT          TTCGTCTGTG CCAA CACTGGCGGA           TATTGCGGATAGAGA  52 51
ISU54_RS08525 NONE
ISU54_RS08530 1978926 .. 1978959 +  -8.1  -3.07935   TAGCTGCCCTTGCTC     ACCCCAGTCACTGAG TTAT CTAATTGACTGGGGA      TTGGATACCTCAGCT  63 38
ISU54_RS08540 NONE
ISU54_RS08545 NONE
ISU54_RS08550 1982533 .. 1982565 + -16.5  -3.63744   GACACTTTTTTGCCT      TAAAACGCCTGATGA ACT TCATCGGGCGTTTTG      TATTTTAACGACAGA 100 74
        ychH 1986186 .. 1986211 +  -8.9  -5.42975   TTCAAAAACAGAAAA         CCCGTTGTCGC ACAG GCTTCAACGGG          TTTTTCTTTATCTGC 100 62
        hemA 1990716 .. 1990726 +  -6.8  -2.75159   ACGCGACAGCCTTGG                 GCTG GAT CAGC                 ATTAGTTTCCTCTAA  57 10
        prfA NONE
        prmC NONE
ISU54_RS08605 NONE
ISU54_RS08610 1993974 .. 1993985 +  -7.2  -2.63913   CGCAGCGGTTTTATA                GGGC AATA GCCC                 TCGTATACCATAATG  58 52
        kdsA 1995207 .. 1995230 +  -5.2   -5.1861   TTGTCAATAACCTCA          CGCAGCGTAG GTAA CTAAGCTGCC           TTTTTTGATAATCAA  81 335
ISU54_RS08655 2003433 .. 2003453 + -12.5  -3.79611   AGGCGCATATGAAAA            ACCTCCGGC TAT GCCGGAGGA            TATTTATTCTGCTTC 100 105
ISU54_RS08665 NONE
ISU54_RS08670 2006403 .. 2006419 +  -7.3  -4.16016   AAAGTTATAGCAATT              TGCTGAT TTC ATCGGCA              TTTATTGAGGGATAC  73 491
ISU54_RS08680 NONE
ISU54_RS08685 2008351 .. 2008392 +  -8.7  -3.80625   GTAGCGTGAAATGAC CTGTGCCGGTTAGTCAGTC AATG GGATGACTAATTGGCCCGG  TTTAACTTCTAACCC  78 470
        rimJ NONE
ISU54_RS08705 2013223 .. 2013247 + -12.2  -2.60615   CCCCATTGGGTAGAG          CAACGCCTGC AGACC GTAGGCGTTG          GTATTTACAGCACAT  83 229
        murJ 2014960 .. 2014976 +  -9.4   -5.1615   ATAATGTATTATATA              GCCCGA TAATT TCGGGC              TTTTTTACATATTGA 100 164
ISU54_RS08715 2016975 .. 2016987 +  -4.9  -2.61383   TACAGGTATTGGGCC                GTATA GCT TATAC                CTTCTAACTCAACGT  48 6
ISU54_RS08720 2021959 .. 2021972 +  -9.5  -5.07107   CTAATCGTTTTTTAA               GGCCC CGAG GGGCC                TTTTTTGACGATTTA 100 230
ISU54_RS08730 2024896 .. 2024919 +  -3.1   -2.9924   TTTACGCCAAATTGT          TGATAGCGA GCACGG TCGCTAACG           TATATGGGTTATTTA  44 4
        cutC 2026076 .. 2026100 +   -10  -4.80959   ATATAACGAACGGTA          TCCCCCATCT GGGTG AGTTGGGGGA          TTTTCTTATGGCTTA 100 188
        aspS NONE
        nudB NONE
ISU54_RS08770 NONE
        ruvC 2034325 .. 2034344 + -12.2  -5.34555   TTAACTGTTATCACA            GGCTGGAT ATCC ATCCAGCC             TTTTTTATGCTATAA 100 64
        ruvA 2035169 .. 2035191 +  -7.7  -2.93572   ATCCGTGATGCTCTC          CGTGCGGCGT TATA ATGCCGC-CG           ATTTATAGAATGAAT  62 11
        ruvB 2036346 .. 2036404 +  -9.8  -2.85803   TATTACTCGGGAAGA ATAATACGTTTCACGCTGTGGGGGTTA TAGGCC TAAACCCCACAGCGTGAAGTG-ATGAC TATCCTCGTGCTTTT  72 22
        znuA NONE
        mepM 2040353 .. 2040387 + -15.2  -3.74077   TCGGTGTGTTTATCC     CTAAGCTGCCAGTG AGTTGAG CACTGGCAGTTTAG     TTTCAGTCTGTCAGC 100 65
        lpxM 2041831 .. 2041862 + -10.8  -4.46757   GGGGTTTGTCAGCAG      TCTGAGGCCCGCTA GTGA TAGCGGGCCTTTGC       TTTTCTGCCTATCTT 100 314
         zwf NONE
ISU54_RS08835 2047301 .. 2047327 + -11.6  -5.03314   TATTTTCACCAAAGA         CAGAGCCTCTGC ATT GCAGGGGTTTTG         TTTTTTCAGAATCAC 100 78
        mdtJ 2048391 .. 2048406 +  -3.2  -3.09844   TGAGTCAGGTGAGCA              TCATGC AGCA GCTTGA               GTTTTACCCTATAGC  46 10
        mdtI 2048743 .. 2048768 + -15.5  -4.97405   CCAGAGGCAGTAAGC         GGAGGGTAGCC TGGC GGCTACTCTCC          TTTGTTTTTGTGGCT 100 46
ISU54_RS08855 2051273 .. 2051286 +  -2.5  -3.73072   ACTATGCGCGCCCTG               TAAAT ACAT ATTTA                TTTCCTGCCGAGGTT  50 65
        tsaB NONE
ISU54_RS08865 2052939 .. 2052956 + -12.7  -4.64844   TTGTCAGCAGTCAGA             GGCGCTG AGTC CAGCGCC              TTTTCTATATCTACA 100 219
        fadD 2055097 .. 2055131 + -18.1  -4.31433   ACGGAGTCACTAAAT    CATCAACAACGCCGGT TATC ACCGGCGTTGTTG-TG     TTTGTTATCGAACTA 100 45
         rnd 2056555 .. 2056580 + -14.8  -3.61517   GTCAATTGAGAATAA         CGCCCCTGTA AATAAA TACAGGGGCG          TTATTGAGAAGAAAT 100 222
ISU54_RS08900 2059416 .. 2059464 +    -4  -2.65448   TCAACCACGTTTAAA TTCAGCATCACTACATTGACCGC AGAG GATGTAAATGTCGTGATG-TGAA ATTCATTGGCTTTGG  45 57
ISU54_RS08905 2060587 .. 2060607 +  -6.1  -2.78672   ATTAGCATTGGTATG            ATGGCCGAT AGT ATCGGTCAA            TAGTCTGTGTTTGCC  55 2
ISU54_RS08910 NONE
ISU54_RS08915 2062284 .. 2062297 +  -4.5  -5.20328   TGCCAAATTCGCGAA               GGTGG ACAT CTACC                TTTATTTTTTTCCCC  80 423
ISU54_RS08925 NONE
ISU54_RS08930 2065409 .. 2065431 +  -2.8  -3.67141   CATGAGCAGGTCTTC          TGAAACCCA TTTGCT TGGGTT-CA           TTTGAATAACGTTAT  52 412
ISU54_RS08945 NONE
ISU54_RS08950 NONE
ISU54_RS08955 NONE
ISU54_RS08960 2068210 .. 2068235 +  -2.5  -2.72799   CGTCTCACCACCCAA         TGATTTGCACC AGAC GGTGGTGATCA          TCCTATATGTAGGAG  41 23
ISU54_RS08965 2069208 .. 2069225 +  -9.1   -4.8622   ACCAACTAATTTCAA             GGCTCAC TTCG GTGGGCC              TTTTTACTTCAGAGA 100 409
ISU54_RS08975 2069838 .. 2069857 + -11.4  -4.43272   CCGGTACTTTTTCAG            GGCTACGC TTAT GCGTGGCC             TTTTCCGTTTTAGCT 100 406
ISU54_RS08985 2070155 .. 2070165 +  -3.2  -3.14564   CGGGAGAAGGCTAAT                 GAGT CCA GCTC                 TTCGTAAGAAAATAC  46 8
ISU54_RS08990 NONE
ISU54_RS08995 2071533 .. 2071554 +  -8.7  -5.45652   AACAAAGAACATGAA           GGCTCAGTT TAAC GACTGGGCC            TTTTTTATTGGCAGT 100 400
ISU54_RS09000 2072823 .. 2072847 + -11.5  -3.85698   TTTTCACATATCGAA          GTCTCAGCC AATTAGC GGCTGAGAC          TTTATCAACCAGCGG  95 431
ISU54_RS09005 NONE
ISU54_RS09010 NONE
ISU54_RS09015 NONE
ISU54_RS09020 NONE
ISU54_RS09025 NONE
ISU54_RS09030 NONE
ISU54_RS09035 NONE
ISU54_RS09040 2079373 .. 2079390 +  -6.2  -5.14563   TATCCAAAATCTGAG             CCTCGC CATCGT GCGGGG              TTTTTTAATGGGCCA  87 85
ISU54_RS09045 NONE
ISU54_RS09050 2081442 .. 2081455 +  -9.5  -4.66537   ATGGTGATGACTATG               GGGGC TGTG GCCCC                TTTTCTATTGGAGGA 100 40
ISU54_RS09055 NONE
ISU54_RS09060 NONE
ISU54_RS09065 NONE
ISU54_RS09070 NONE
ISU54_RS09075 2083572 .. 2083585 +  -9.5  -5.71712   ATCAATCCAACACCA               CCGGC CTAT GCCGG                TTTTTTTATATCCAA 100 47
ISU54_RS09080 NONE
ISU54_RS09085 NONE
ISU54_RS09090 NONE
ISU54_RS09095 NONE
ISU54_RS09100 2089154 .. 2089171 + -10.5  -5.64274   CACGCCCTTTCTAAA             GGCTGCC TTAT GGCGGCC              TTTTTTTATGGGTGA 100 163
ISU54_RS09105 NONE
ISU54_RS09110 2090859 .. 2090876 +  -3.4   -4.9218   GGTTATGCCGTTACA             CCGAAG ACGAAA TTTCGG              TTTTTGTCATAAGTA  71 229
ISU54_RS09115 2091571 .. 2091584 +  -9.5  -4.78149   CGAATAAAAACTAAA               CCCGC TCCG GCGGG                TTTTTGCATTCTAGC 100 48
ISU54_RS09125 NONE
ISU54_RS09130 2093460 .. 2093475 +  -6.1  -4.85195   TCACACAAAACCCAA              CCCAC TTAACT GTGGG               TTTTTGCGTTATTTT  80 55
ISU54_RS09135 NONE
ISU54_RS09140 2094460 .. 2094475 +  -8.2  -5.45652   TGTAAAACAAATCGA              GGTCGC TTAG GCGGCC               TTTTTTATTGGAGAT 100 47
ISU54_RS09145 NONE
ISU54_RS09150 2095651 .. 2095667 + -12.3  -5.64274   AATAAACACGCCAAT              GCCCACA CTT TGTGGGC              TTTTTTTATGGGTGA 100 356
ISU54_RS09160 NONE
ISU54_RS09165 2099890 .. 2099900 +  -2.6  -2.95884   CATTTATTTTTAAAA                 TTAA GGA TTAA                 TATATGGCTTGGTAC  43 28
ISU54_RS09170 NONE
ISU54_RS09175 NONE
ISU54_RS09200 2107938 .. 2107956 + -11.7  -3.21416   AATCTGATATAAAAA             TGGCGCC AGAGA GGCGCCA             TTGATAATAAAGATA  84 398
        fadR 2111456 .. 2111472 + -10.1  -5.04385   TTGTCAGCAGTCTGA              GGGGCGT TTA ATGCCCC              TTTTTTACCGATGTC 100 196
ISU54_RS09225 2115215 .. 2115228 +  -3.1  -4.68593   CCGATCATCAGGCAG               GTAGGG CGG CCC-AC               TTTTTGAATAATCCG  66 432
ISU54_RS09240 2118292 .. 2118304 +  -4.8  -3.72742   ATACCGCTAACGTTT                GCAC CGCTA GTGC                TTATGTTGATGATAC  57 54
ISU54_RS09260 2124105 .. 2124121 + -13.7   -5.0916   CTATGAGCAAGACCA              TGGGGCC AAA GGCCCCA              TTTTTATATTGACCG 100 55
        msrB NONE
ISU54_RS09280 2127530 .. 2127551 +   -13  -4.56597   TCTGAATACAAAAAA           TGGGCGCC GAGGCA GGCGCCCA            TTTTTGCGCAGAAAG 100 119
ISU54_RS09300 2131960 .. 2131993 +  -5.3  -4.18094   TCTTCACTCATGTTA     TGCAGCTTATGTTCT TTAC GGGGAATAAGCTGCG      TTTTAGCCTGCTTTG  65 56
        selD NONE
ISU54_RS09310 NONE
ISU54_RS09315 2135724 .. 2135749 +  -6.9  -2.78679   CTCACGGATCAGCGC         CTGAGGCT-GAG TTT CTCCAGCCTCAA         CTTTGCCTCCAGGAA  53 290
ISU54_RS09330 2138507 .. 2138524 +  -8.5  -3.27704   TTCTACGCTCGGCGC             GAACCTT GTCG AAGGTTC              TTACCTTTCCCAGAT  69 100
ISU54_RS09350 2140715 .. 2140726 +  -5.8  -3.24747   AATAATCTTCACTCC                GCGT TCAT ACGC                 TTGGTGGTATGGCCG  55 228
        rssB 2144386 .. 2144397 +    -3  -2.52464   TCGTATCGCGAGAAA                TATC GATA GATA                 TACGTTCGCGACGAC  42 169
ISU54_RS09370 2146274 .. 2146297 + -15.4  -3.69323   TGAAAGACAAAAAAA          CACCCTCCTA TTAA TAGGAGGGTG           TTTCGATAGTAATAG 100 404
ISU54_RS09380 2148342 .. 2148368 +  -5.2   -3.5882   CCTGTCCAGCCCATT         CAGCAATATTGT CTT ATGATATAGCTG         TTTGACCCTACTGTC  59 290
        tnpA 2150806 .. 2150830 +  -9.9  -4.43877   ATAGGCGCATATGAA          AAACCTCCGGC TAT GCCGGAGGATA          TTTATTTCCGAATTA 100 103
ISU54_RS09415 2155588 .. 2155609 +  -4.4  -3.34895   CAGCCAAATCAAAAC           CAGCGC AACTTGTACC GCGCTG            TTGGTTAACCATAAG  52 406
        pntA NONE
        pntB 2161396 .. 2161423 + -15.6  -3.62046   AACATCCATTGTATT        GCTCAGGGCCAC TTCG GTGGCCCTGAGG         TTATTGACAAAGTGC 100 53
        phoA 2165788 .. 2165810 +  -9.9  -4.96646   TATCTCACTGGAACG          TCCCGGCGCA GTAA TG-GCCGGGA           TTTTTGCTTATGTCC 100 50
ISU54_RS09460 NONE
        yjjG 2169520 .. 2169542 + -10.6  -3.63627   AATAAGCCCGTTAAA           CCCTGTCG GCAGTAA CGACAGGG           TTTAACGTGTGACAA  82 52
ISU54_RS09485 2173010 .. 2173036 +  -7.9  -4.84017   CTGCTGTTTAAAAAA         TGCGCTTCTCC GTCGG GGAGTTGCGCA         TTTTTGTGGCACGTT  91 122
ISU54_RS09505 2181844 .. 2181875 + -13.8  -3.17075   AATAGATTGAAAAAC      AACGCAGGCGGATGA TGA TCA-CCGCCTGCGTA      TTGAATTGAGAGAGC 100 45
ISU54_RS09530 2186341 .. 2186357 +  -5.1  -3.29144   TGGTGACATGAGTTG              CTATCGA TGT TCGGTGG              TTATAAAACAGCTAA  55 30
ISU54_RS09535 2187741 .. 2187757 +  -6.6  -2.78712   TTGATGAGAGGATAC              CGATAC AGGCC GTATCG              TAGTTAGCTTCACGA  57 350
        clcB 2189522 .. 2189533 +  -2.2  -2.95204   GCGGCTAACCGATCC                CGTA GCAT TGCG                 ATTGTTTCAGCATAA  41 251
ISU54_RS09560 2193983 .. 2194001 +  -6.6  -2.55015   TGTTTTGTTACTATG             CCGGTTCC AGC GTAGCCGG             TACGTTAGGTGGCGT  55 57
ISU54_RS09565 2195308 .. 2195328 +  -6.8  -3.26649   TAGCCACTGTAAAAA            CGCCGG TAATCCACC CCGGCG            TTAATATAACAATGT  61 62
        manA 2198334 .. 2198347 +  -3.1  -5.07107   GGCCTATATTATTTG               GGAGA TATA TCTTC                TTTTTTGGGGATTTC  71 152
ISU54_RS09580 2200020 .. 2200037 + -12.7  -4.27861   TTTGTTTGATAAAAA             CGGAGCC CATT GGCTCCG              TTTTAAATCTCTATT 100 54
ISU54_RS09620 2210254 .. 2210272 +  -3.2  -4.54047   AGTCTACTTTAACGA             CATTCA CGATAAC TGAATG             TTTTATATCGAGTAA  63 52
        araA 2211871 .. 2211915 +  -7.8  -2.59748   TAAAATTCGCTATGA TAG-CGACACCCTCAGAGGCC TGTT GGCTCCTGAGGGTGATGACAA TGCGTTATAACCATG  60 83
ISU54_RS09655 2218588 .. 2218613 +  -5.4  -5.55855   ATCTGTTGTCGTCGG         GCCGTCAATT TTGGAT AATAGGCGGC          TTTTATTTTTTTAGG  87 100
        rsxA 2219198 .. 2219216 +    -6  -3.46965   TCTGGCCTTTATGGG             CTTTACCG GTT TGGTGAAG             TTCTAATGATGTCTT  59 1
        rsxB NONE
        rsxC 2222226 .. 2222240 +  -7.2  -2.70932   ACGCTCTTCTGCCCC               TGTTGA CCA TCAACA               TCCTTAACAGAAAAC  55 434
        rsxD NONE
        rsxG NONE
ISU54_RS09690 NONE
         nth 2226505 .. 2226546 +  -7.3  -2.53995   TTAAATTCTACCTGG CTCAAATTTGGGGGCGACG ATTA TGCTGACCCCAAATTTGAA  TCCATTCGGCTAAAT  58 157
ISU54_RS09710 2231519 .. 2231544 + -16.1  -5.30189   TGTTTTAACATGATA         GCCGTCGGAGG AATT CCCCCGACGGC          TTTTTTAATGTTATG 100 49
ISU54_RS09715 NONE
ISU54_RS09720 2234240 .. 2234270 + -13.5  -4.18506   AAATTAGTGACACCG       TAACGCCCTATAG TGATT TTATAGGGCGTTA       TTCTTTTACCGCTCA 100 56
ISU54_RS09730 2235819 .. 2235831 +  -6.9  -3.73402   GCAGGTACAGCATCT                GGGGT GAT GCCCC                TTTCATGGAAAGTAT  64 271
        osmB 2237167 .. 2237194 +  -9.3  -4.60797   AAGTTCTAAATAAAA        TACGGCGTTTGA CAATA TCA-ACGCCGTA        TTTTATATCTGCGCG 100 200
ISU54_RS09755 2239097 .. 2239116 +   -10  -2.63073   ACAACAGCTAACAAC            CGGGTGGA CCCG TTCACCCG             ATCTTATTAGCAAAG  71 60
        ribA 2242729 .. 2242755 +    -8  -3.56092   GCGAAATAAGAATAA         GGGTAGGTTCAA TAA TTATACCTACCC         TTTAGAGGCTGATAA  68 57
ISU54_RS09805 2251803 .. 2251832 + -10.8  -3.10611   GGTTGGTAGCAAATA       GCAGGGGGTA CCGTTCAGAT TACCCCCTGC        ATTTATTGCCATCAC  79 82
ISU54_RS09815 NONE
        cobO 2254842 .. 2254864 +    -9  -3.55801   TTAAGATCCAGTTCA           GTCCAGCCAC CCC GTGGCAGGCC           TTTCGGCAAATTAAT  70 416
        trpL 2257884 .. 2257898 + -11.4  -5.64274   TGCAGATTGCTTCAG               CCCGCT AAT AGCGGG               TTTTTTTATGGATAG 100 53
ISU54_RS09845 NONE
ISU54_RS09850 NONE
        trpD NONE
       trpCF 2262636 .. 2262658 +  -3.4  -2.76399   TAACACCACTGCGGC           TTCAAATACC AAG GGGATATGAA           CTTACTTTGGTTAAC  43 114
        trpB NONE
        trpA 2264791 .. 2264819 + -10.4  -3.65832   CATTACCGCCCTTCA        GCGCCTGTTT GTTTACATG AAACAGGCGC        TATTTTCAGCCATTT  82 116
ISU54_RS09875 2265367 .. 2265388 +  -7.2  -3.14564   AAGTAAAAAACAGGA           GGAGGCGC ATAACC GCACCTCC            TTACTGCCCGCCTAA  62 35
ISU54_RS09890 2267633 .. 2267643 +  -3.2  -4.09739   GACCAAGACCAAATC                 GTCA TCA TGGC                 TTTTCAGGCGATTAA  56 263
ISU54_RS09905 2270068 .. 2270083 +  -2.6  -3.04398   CTCAGTGGGCCGCCC              TTAGTC AGTG GATTAA               CTTTTAAAAGCAGAC  43 70
        yciA NONE
ISU54_RS09915 2272243 .. 2272261 +    -3  -2.76696   GTGTTGAGGCAACTG             GTGCCGAT TTT ACCGGTGC             ATTGTTCGCAACCAG  41 360
ISU54_RS09925 2273279 .. 2273291 +  -3.3  -3.71913   TCGGTAATTATTAAA                CCCTT TAA ACGGG                TGTTTTGAATCTAAA  51 5
ISU54_RS09930 2273800 .. 2273839 +   -11  -6.15536   CGGTTGTAGACACTA  GATATAATAATACGCCTA AAGC TAGGCGTATTATTATAAG   TTTTTTTTGTTAATT 100 58
ISU54_RS09950 2275843 .. 2275857 +  -2.9  -3.25378   CGAGAGTTGCAAGTC               CTTTT AGATG AAAAG               ATTTTATACATCAAT  46 15
         cls NONE
ISU54_RS09960 2277928 .. 2277958 +  -8.2  -3.21466   AAATAAAGAGTTAAT       CATTGCCCCATAGT TCA ACCCCGGGGCAATG       TATCTTAATTATCCT  67 52
        adhE 2289577 .. 2289604 + -15.6  -5.07652   CAAAAAATGATATAA        CCCCCGATGAGC AGCC GCTGATCGGGGG         TTTTCTTTTACAGAC 100 83
ISU54_RS10005 NONE
ISU54_RS10010 2292108 .. 2292126 +   -16  -4.37092   GAAAGCTTTACTGAA             CCCCCAGC CTA GCTGGGGG             TTTTCTGGGCACAAT 100 273
         asr 2297911 .. 2297928 + -12.7  -5.24531   AAATGATTCACTCAA             CACCCGG TTCT CCGGGTG              TTTTTTATCAGGAGT 100 93
ISU54_RS10040 2299021 .. 2299032 +    -3  -2.54566   CTCAGTAATTTTACC                TTAG CCCG CTAA                 ATATTATGCGATCTT  42 33
        azoR 2305071 .. 2305088 + -14.1  -5.35222   AGCCATGTGATGATT             GCGCGCC AACC GGCGCGC              TTTTTTATGCCTTTT 100 124
ISU54_RS10070 2307916 .. 2307926 +  -8.2  -3.17798   GCACATATTCGCCCT                 CCGC CGC GCGG                 TTGACTAATTTCTGC  62 291
ISU54_RS10090 2312414 .. 2312443 +  -7.9   -3.4252   ATTAACACCCAATAG       CGGATAGCGAG TGTACATT CTCCCTATCCG        TTATGATGAGTAGGA  68 44
        hslJ 2313181 .. 2313193 +  -2.6   -3.2056   CGATAGCGTTGGTAG                CCTG CTGCT CGGG                TTCGTAGGTCTCGCT  44 289
ISU54_RS10105 2314724 .. 2314737 +  -2.3  -2.74461   TCATTAAATTGACAC               CGGCT TCAC AGCGG                CTTTACAAGTCAGTG  41 489
        nifJ 2318699 .. 2318724 + -13.4  -5.18995   TGTGCGATTTACTGA         GCCAGTTAGC TAAACC GCTAACTGGC          TTTTTCTATTATCTT 100 60
        ttcA 2320095 .. 2320107 +  -6.3  -3.12856   CTACCCCATTGACTA                TAGAG TAA CTCTA                TCCTTTATATTGATT  57 240
ISU54_RS10125 2321161 .. 2321178 + -12.7  -2.85545   TAGCCAGTAAAAATA             GTGGGCC AAAT GGCCCAC              TGATGTTATTGGCAA  89 31
ISU54_RS10130 2322587 .. 2322621 +  -4.2  -4.67353   GCAAAATAATCATGC     CTGAGCCACCACAACA AAG TCTTGATGTGGCTCAA     TTTTTCGGTGACTAA  68 306
        mpaA 2327139 .. 2327150 +  -2.2  -2.73364   GCTGCCAGCCCTTCA                GGTT GCCA AGCC                 TCATTAGCATCAACG  39 494
         tpx 2328428 .. 2328452 +  -7.8  -5.55769   TATCGTGACTCAAAA         CGGCTG-CCCC ACTC GGGTACAGCCG          TTTTTTATTGTGCCC 100 101
ISU54_RS10160 2329137 .. 2329169 + -11.3  -4.20024   CCTTATAGGCGCATA      TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA      TTTACTCTTTTTTAT 100 99
ISU54_RS10170 NONE
ISU54_RS10175 2332520 .. 2332538 +  -8.8  -3.85817   ATCATCAACGCTGAT             TCAGCAGC ATA GCGGCTGA             TTTCTGCCCGAGCCT  75 456
        pspF 2337614 .. 2337632 + -10.2   -4.8048   GGGTAAAATAAATAT             CCTCCGAC ATA GCCGGAGG             TTTTTCATATGCGCC 100 91
        sapA NONE
        sapB NONE
        sapC 2342312 .. 2342322 +  -2.6   -2.6155   AATGCGGGGGTGGAA                 TAAT GCC ATTA                 CTTGATATTCGCAAC  41 23
        sapD NONE
        sapF 2344162 .. 2344181 + -12.2  -3.96534   CGGTGGTTAACCTCC            CCGCTATC TTTT GATAGCGG             TTATCTTCTTTTAAC 100 66
ISU54_RS10245 2345997 .. 2346008 +  -2.2  -4.30441   TTACACAACTATTTT                TGTG GGCA CGCA                 TTTTGCCTATTCTGC  58 231
        dtpA 2347950 .. 2347967 + -12.7  -4.33105   ATAAGCTGACTAAAC             GCGCTCC TGCG GGAGCGC              TTTTAGTGCTAGTTA 100 37
ISU54_RS10255 2348917 .. 2348929 +  -4.8  -4.84492   TCCATCAGCATTGGA                GCCT CTAAC AGGC                TTTTATTGTCATTAA  74 159
ISU54_RS10260 2349391 .. 2349433 +  -3.4  -3.03441   TATCAATACAACTAT CAATACACTACAGCGGGGG AAATCA TCACCGCTGTAG-GACTTG TATTGCCCCCTCATA  44 124
        gstA 2350157 .. 2350193 +  -5.1  -2.78712   ATAAATAATGAGAAT    CAATCAATTGCCCCC ATCACTA GGGGGCAATTGAAAA    TGGTTAGATTACAGC  50 40
ISU54_RS10295 2355976 .. 2356006 + -14.1  -5.34555   TAAATCAGAACAGTA       AAAACCGGGGTTC ATTGC GAACCCCGGTTTG       TTTTTTGTACTGTGG 100 77
        eptA 2358803 .. 2358822 +  -5.7  -5.80364   AGACCATAGCCTTGA            TGCCAGC GCCTTG GTTGGCA             TTTTTTTCTTGACCT 100 185
ISU54_RS10310 2359513 .. 2359531 +  -3.9  -3.12895   TTTTTCAGGATTTAC            CCAG-CAA CTAG TTGACTGG             TCTATTAATACAGGA  48 73
        gloA 2360946 .. 2360963 +  -8.4  -4.48987   ACTGATTAACTTAAG             GGCACC TCGGAC GGTGCC              TTTTACTTATCACAA  87 36
         rnt 2361902 .. 2361919 +  -8.4  -4.15703   TTGTCAGCAGTCTGA             GGTGGC CATTAC GCCACC              TTCTTATTTATCACA  79 233
ISU54_RS10340 2363694 .. 2363705 +    -3  -3.16668   TAAAAACTTTGTTAT                CAAA AATA TTTG                 TTAGTAAAAATATTC  46 75
        sodB 2364653 .. 2364675 + -16.4  -3.68222   CATCGATAACATAAA           TAAGGGCGGT TTA ACCGCCCTTA           TTATTACCATTCACC 100 78
        purR 2366199 .. 2366219 +  -9.8  -3.85092   CCGGCCCGATTCGGA            TAACCGCA TTCCC TGCGGTTA            TTTGCTATCGATGGT  84 72
ISU54_RS10365 2368696 .. 2368709 +  -2.3  -2.58999   TGGTTGGAAAGCAGC               CAGCA GATA TGCAG                CTTGGTGTATGACGG  40 56
         cfa 2370309 .. 2370332 +  -9.6  -4.73105   TAACCTCAGATAGGA          GACAGGGG GATAAAAA CCCCTGTC           TTATTTTTTGTAGGT 100 38
ISU54_RS10380 NONE
ISU54_RS10385 2372810 .. 2372820 +  -8.2  -3.39449   CCTCTTGCCAGCAGA                 CGGG CAG CCCG                 TTAGTATTCGTCCCC  69 210
ISU54_RS10390 NONE
ISU54_RS10395 2373122 .. 2373134 +  -7.7  -3.32516   CTCTATTTTTCCTTT                GTCAG TTC CTGAC                TATTGGTTGATTTCT  66 67
        pykF 2375094 .. 2375123 + -10.8    -5.055   TTATTGTTCAATAAT       TAAAACGCCGCT CTCTAT AGCGGCGTTTTC        TTTTTTAAAGCTTGC 100 51
ISU54_RS10405 2375647 .. 2375665 + -14.6  -5.60993   TTCCTGAATGAAAAA             TGGCGCAC ATT GTGCGCCA             TTTTTTTGTGCCCAG 100 47
        tnpA 2376252 .. 2376270 + -13.2  -4.01078   CCAGGGGGTAGTCTG             CTCTCCTG ATT CAGGAGAG             TTTATGGTCACTTTT 100 30
ISU54_RS10415 NONE
ISU54_RS10420 2378312 .. 2378336 +  -9.9  -4.44046   ATAGGCGCATATGAA          AAACCTCCGGC TAT GCCGGAGGATA          TTTATTTGCCCTACG 100 262
        ydiK 2391936 .. 2391946 +  -2.6   -5.4505   ATCTCATTCTACTTC                 TTAT TTA ATAA                 TTTTTTATTCAGAGG  80 199
        rprA NONE
ISU54_RS10490 NONE
ISU54_RS10495 2397156 .. 2397204 +  -7.8  -5.00616   ATTAAATGAATACCT TCGGGATAGGGAAAAGTTAAC GTTGTCGG GTTAACTTTT-TCTATCCCTA TTTTTTCCGAAAAAA  95 75
ISU54_RS10515 2400560 .. 2400574 +  -4.3  -3.20029   CTGCCTTACTGCACA               CCTAA CGACT TTAGG               TATATATTTAGCTGG  49 67
ISU54_RS10615 2419805 .. 2419819 +  -3.6  -3.09516   TGATAAAAGGCAAGT               TTTTGT GCC GCAAAA               TTGGGTAGTACACAA  48 3
ISU54_RS10625 2421910 .. 2421952 +  -4.9  -4.21098   AAAATTTAAAGTAAA CGCTAGCCGATGCTACACCA TCCA TAGGCTA-CATCGGTTAGCG TTTTAGCATTACTCT  63 96
        yfeA NONE
        yfeB 2424684 .. 2424698 +  -4.2  -3.14848   GTCAAAGGAGCAAAA               TTCCTG ATG CTGGAA               CTTTTACTGCAACCG  49 19
        yfeC NONE
        yfeD 2426485 .. 2426516 +  -2.3  -3.05844   ACGTTTCTATTTATA      TGCGGTGCTGTATG TCTAT TATATAGC-CCGCC      TATTACCATCAACGA  42 46
ISU54_RS10655 NONE
ISU54_RS10660 2427728 .. 2427752 +  -4.1  -3.83998   CAATAAATGAAAAAA          GCCAGCGCATC GCA GTGGTGTTGGC          TTTGATGTCAAATAA  57 109
        hxpB 2429485 .. 2429498 +  -3.7  -4.72272   TGACAAAGGTAAATA               GCGGC AAAT GCGGC                TTTTTAGTAAAAAAG  67 107
        kduI 2432448 .. 2432464 +    -5  -3.60627   GTATCACCTATTAAA              GCCACC TTTAC GGCGGC              TTTCACCTCCAATAA  57 41
        kduD 2433373 .. 2433392 + -12.2  -5.74288   CTCAAAAACGCATCA            GGCACAAC TTTG GTTGTGCC             TTTTTTATTATTTAT 100 113
ISU54_RS10695 NONE
ISU54_RS10700 NONE
ISU54_RS10705 NONE
ISU54_RS10710 NONE
ISU54_RS10715 2439608 .. 2439645 + -14.4  -3.74693   ATTTAACTTAAGTCA   CAAAATAACCCTGCCA TTTATT TGGTGGGGTTATTTTG    TTTAATCAAATAAAA 100 52
ISU54_RS10720 2440657 .. 2440686 + -13.1  -5.53288   CTCTGCATTATTTTG       GGGAAAAGTTGACT CCC AGTCA-CTTTTCCC       TTTTTTTAGCTTAGC 100 93
ISU54_RS10725 2441643 .. 2441656 +  -3.9  -3.73775   CCGTATGAATAACAT               TCAAA TTGA TTTGA                TTTAATACAAATCAA  53 51
ISU54_RS10730 2443267 .. 2443294 +  -5.4  -2.87916   AGTCACTTTTTAGCC        CCCAACCGTGGG ATAC CCCACGAGTGAG         TCGCTTTATTTTTGA  50 80
ISU54_RS10750 2448904 .. 2448917 +  -2.3  -3.29935   ATACGTGAGCGAAAA               GCGAT TTGT ACCGC                ATTTTGTGATGATTG  44 428
        yebS NONE
ISU54_RS10805 2464499 .. 2464513 +  -2.2  -4.26003   AAATCAACATTAGGA               TAATGA AAT TTATTA               TTTATTGCGTCTTGT  58 350
ISU54_RS10810 NONE
ISU54_RS10815 NONE
ISU54_RS10820 NONE
ISU54_RS10825 NONE
ISU54_RS10830 2469787 .. 2469799 +  -3.3  -4.43397   GGCAACAACAGAGTA                GGTCC CCA GGAAC                TTATTTATTTTAAGG  63 90
ISU54_RS10835 2471007 .. 2471020 +  -2.3  -4.13963   TTTCCGAATACTCGT               TCGCT TCCA AGCGC                TATTTTTTAGAGAAT  55 115
ISU54_RS10840 2471383 .. 2471416 +  -2.5  -4.46073   TGGCGATAAGAAGAT     CCGTCAACCCATAG TTCATGC TTATGAG-TGACGG     TTTCTTCTCTTGGAA  61 44
ISU54_RS10850 NONE
ISU54_RS10855 NONE
ISU54_RS10875 2478007 .. 2478019 +  -3.5  -3.23447   CGTCACAAAAATATA                TTTTT AAT AAAAA                TCTTATACCAGTTAC  48 350
ISU54_RS10880 2479413 .. 2479431 +  -7.4  -3.58905   GTTTTCAACGAGTGA             CGCGTTTT CAC AGGACGCG             TTGTCTGTACGAGAT  68 125
ISU54_RS10955 NONE
ISU54_RS10960 NONE
ISU54_RS10965 2504504 .. 2504514 +  -6.8  -4.70659   AACGACATCTCTTCA                 CTGC TCA GCAG                 TTTTTCGATATCAAC  79 357
ISU54_RS11025 2523170 .. 2523188 +   -11   -5.9003   CTTTGCAAAATTTAC             GCGCTCAT CCT ATGGGCGC             TTTTTTTGTTCCTTT 100 211
ISU54_RS11030 2524603 .. 2524625 +  -6.4  -2.87683   TCGAACTGATATGCT           TTAGCATTAA GCT TTCATGCTAA           TATATAACAAACTGT  55 227
ISU54_RS11035 NONE
ISU54_RS11040 2525527 .. 2525538 +  -5.8  -2.78463   ACCACTGAGACTGCT                CCCA ACTT TGGG                 TCTACTCACCGAGGT  53 92
ISU54_RS11045 2526254 .. 2526268 +  -2.8  -3.13403   ATTGATATTTAGGAG               CAGATC TTT GATGTG               TATTGATAAACCAGA  44 107
ISU54_RS11050 2527183 .. 2527207 +  -5.8  -3.16564   CCACATAGCGTCTAA         CTCCCTCACTA ACCC TA-TGGGGGAG          TTAATAGACTAAGGC  55 45
        ydfZ 2527794 .. 2527829 +  -5.5  -5.60993   TGCCGGTATTTATTT   GCCGGGTCTGGCCTA CCTTTTAT TGGGCCA--CCCGGC    TTTTTTTATGACAGC  91 150
ISU54_RS11075 2531666 .. 2531676 +  -5.4  -2.62515   TTTAAGGGTGATACT                 TTCC GCA GGAA                 TAATCTCAACCACTT  49 463
ISU54_RS11080 2533810 .. 2533827 +  -2.7  -2.80344   AAAACCTCGCTATAG             TGGGTAG GTGG TTATCCA              ATTATTAAATAAGGA  42 107
ISU54_RS11085 2534163 .. 2534180 + -11.3  -3.18292   TCCTCAATACATTCA             GCCCTCA ATAT TGAGGGC              GTTTTACTGCTGCCT  84 80
ISU54_RS11090 2535527 .. 2535554 +  -8.4  -3.92869   CATAAATAGTATAAA        CTTCACGAAAGC ATAA GCCCTCGTGAAG         TTTATAGATACGTCA  77 125
        rluE NONE
ISU54_RS11105 2538018 .. 2538034 +  -2.2  -4.19336   CCTTTAACTGGCCGC              TCTGAC CCTCA GCCAGA              TTTATTCAGGTAATT  55 21
        mnmA NONE
        hflD NONE
        purB 2541451 .. 2541496 +   -13  -3.34192   GTAATATTCTTTATC TAATACAGGTGGC-TTAGTTT GGTAA AAGCTAACGCCATCTGTATTA TTCCTTCCCCCCCTT 100 37
ISU54_RS11125 2542407 .. 2542441 +    -5    -4.386   TGAGCGTCAAATTTT     CACTTACCGGATAATA TCC TGTTATCCGGTTAACG     TTTTATCAAGGATTG  66 182
        phoP NONE
        phoQ 2544623 .. 2544638 +  -3.2  -2.62515   AGCCCCTGATACTGA              TGGCGG GTAT CCGTTA               TAATCTCAGGCAATT  42 56
ISU54_RS11140 2545994 .. 2546010 + -10.8   -4.1897   GTCAATAACCTCAAA              CGCCCC TTTTC GGGGCG              TTTCTCTCTATCGTT  93 222
         mfd 2556526 .. 2556545 +  -2.8  -4.87665   GGTATTACGCTCGGT            TGTTCAGC ACCA GTTGACCA             TTTTTATCAATGGGG  67 275
         maf 2582361 .. 2582383 + -11.2  -2.56836   ACAGTCGAATAAAAA           CGGGGCGCAT GCT GTGCCCCCCG           CCTTTTATGATCATC  76 80
         rne NONE
ISU54_RS11340 2589232 .. 2589253 +  -7.3    -4.371   TAACGAGGATCAATG           CGGCTCATT ACCG AGTGAGCTG            TTTTAGTATACTCAA  75 337
ISU54_RS11360 2591808 .. 2591824 +  -5.1  -3.13867   AGTGAAGCAGATAGC              TTGATGG CTG CCAGCAA              TATCTTGATAAATAG  53 22
        solA 2594978 .. 2594991 +  -2.4  -3.92542   GTTCAAGCCTTTAGG               GGAT TACCTT ATCC                TTGTTTGCGACTAAA  53 231
ISU54_RS11380 2595762 .. 2595778 +  -5.2  -4.07495   ATCAACCACACTCAA              TCAACA TGGTT TGTTGA              ATTTTTTTGTTACAT  63 134
ISU54_RS11385 2596166 .. 2596205 + -11.4  -4.37092   TACCCCATTTTCGGT  TCCTCAGGGCCGTAGG CCAATTAA CCAGTGGCCCTGAGGG   TTTTCTAACCACCGT 100 81
ISU54_RS11410 2601485 .. 2601497 +  -6.3   -5.0095   TCATTTTCCCGAGGA                GAGAA AAT TTCTC                TTTTATTCTCTTTTT  81 208
ISU54_RS11430 NONE
         fae NONE
ISU54_RS11440 2607014 .. 2607029 +  -5.4  -3.33744   AAACAATAGAAAATA              CTGTTC ACTG GAACGG               CTTTTTAAACGCAGA  53 208
ISU54_RS11475 2617865 .. 2617876 +  -2.2  -3.12702   TGCTGTGAGTAGCGG                GCTG ATTG TAGC                 GTTTATTAAGTGGTA  43 279
ISU54_RS11520 NONE
ISU54_RS11525 2628740 .. 2628751 +    -3  -2.75481   CAATTAACTCAACTG                CTTT ATCC AAAG                 TAATTAAAGTTGCAA  43 11
        ugpC 2630410 .. 2630444 +  -4.2  -3.53174   TTACACTCTCTGCCG     CTGGTTGGTAGTTGCG CAT CGCATGTAACAACAAG     TCTTTATAACCATCT  54 502
ISU54_RS11615 NONE
ISU54_RS11620 2654365 .. 2654375 +  -6.8  -3.01791   CGGCCTACGAAAATA                 TGGG GCA CCCA                 TGTTCAACCCGCCGT  58 43
        rhtA NONE
ISU54_RS11670 NONE
         tam 2666014 .. 2666025 +    -3  -4.16943   TAACTATATTATTTA                TAAC AAAC GTTA                 TTTTAGCGTATAAAC  58 113
         dps 2666721 .. 2666737 + -10.8  -2.71364   CTATTACGCTGAACA              GGGCCG TTAAC CGGCCC              TGCTTGCCGCCCTCC  76 60
ISU54_RS11685 2668400 .. 2668410 +  -4.6  -3.13899   CGCTATCGCACCTTT                 TGGG TGT CCCG                 TGTTAGTGCAGCCTT  51 292
        glnH NONE
        glnP NONE
        glnQ 2670935 .. 2670963 +  -8.8  -5.26918   TGGCTAGAAATCACA        CTGGCGGACATC TTACT GATACCCGCCAG        TTTTTTATAGGCTAT 100 104
ISU54_RS11710 NONE
ISU54_RS11715 2674524 .. 2674535 +    -3  -3.58329   GGCGCGGTTCGAGCC                TACA TGGA TGTA                 TTTACGGCGTCTTTA  51 295
ISU54_RS11720 2675062 .. 2675086 +  -5.8  -2.72217   GGTAACTGGCTGATC         GTGATCACTGA CTTA TC-GTGGTCAC          TGGCTTATTTGGCTT  52 441
ISU54_RS11730 2677008 .. 2677030 +  -9.1  -4.93296   TTGTCAATAACCTCA           GCCCATCCG TTCAT CTGATGGGC           TTTTTCTGGTGGTGA 100 359
ISU54_RS11805 2696867 .. 2696877 +  -2.4  -4.56775   ATAAAACGCAGCCAT                 AGGC GGA GCCA                 TTTTTAACCAAAAAT  60 45
ISU54_RS11830 NONE
ISU54_RS11910 NONE
        yfbR 2720971 .. 2720998 + -15.8  -3.28924   TTCACTGGATTGATC        TTTATAGCCTGC TTGT GCAGGCTATAAA         TTATGACAAGAGATA 100 28
        ackA 2727216 .. 2727230 +  -2.8  -2.73681   CTCTTCATTTTAAGG               TTAACG ACC CGTAAA               TGATTCGGGTGAGTG  42 104
         pta 2729642 .. 2729661 + -10.7  -5.10461   GTCAGCAGTCTGAAA            CGCCAGC CTCTGC GCTGGCG             TTTTTGTTACATCAG 100 209
ISU54_RS11955 2731654 .. 2731667 +  -2.3  -2.70932   GATGGCACCCAAGAG               CGGAC ACAA GTCAG                TAATTAGGGGGAACG  40 111
ISU54_RS11960 2732397 .. 2732408 +  -3.6  -4.02022   CACCATTTTCAAACC                GCTG GTGA CGGC                 TTTATAGTCCTTCCA  59 431
ISU54_RS11970 2734648 .. 2734665 + -12.7  -3.62572   AAGACGTCACCATCA             CCCCCTC CTTG GAGGGGG              TTTAAACTGATAATA 100 56
ISU54_RS11990 2738269 .. 2738279 +  -3.2  -3.02144   GGGGTGAGGGGTGAA                 CCGT GAA ATGG                 TATTCACCCCCCTAA  44 61
ISU54_RS12070 2754885 .. 2754901 +    -5  -2.92938   GTATCATAATATCGG              CCTGCG CCTAC CGCCGG              GTTTCCCTTATTTCC  50 256
         flk 2756258 .. 2756281 +  -3.8  -5.41746   ACAGCATATAAAAAA          GCATGCAGAA TATC TTCCACATGC           TTTTTTTAAGCAATT  84 307
ISU54_RS12085 2758674 .. 2758693 + -12.2  -3.55761   TGTCAATAACCTCAA            GCCTACGA TCTC TCGTAGGC             TTTGGGGAGTAAATC  91 368
        mnmC 2762459 .. 2762471 +  -6.2  -3.30619   AGGGGAAAGCTCACC                GGCC TTGAT GGCC                TTCTCCAGACTGGTT  55 281
        smrB 2768304 .. 2768316 +  -3.3  -2.61264   GGCTTGGTCATGACA                GCCCA TGG TGAGC                CTTATCCATGACACG  42 333
        fadL 2775301 .. 2775328 + -17.2  -4.18018   CATCACCTTATCCAA        TAGAAAAGCGCC TGAT GGCGCTTTTCTA         TTTTGAATACGGCGG 100 53
ISU54_RS12220 NONE
ISU54_RS12225 2787522 .. 2787545 +  -2.4  -5.94214   GGTATCAGTTCGATG          TGT-CCGTCAC TCG GTGTTGGGACA          TTTTTTTATTCTATT  90 113
ISU54_RS12230 2788161 .. 2788189 +  -8.9  -3.83921   AGCTAATGCATTAAT        GGGTTCTTTGC CACCCAA GCAGAGAGCCC        TTCTATTATCTTGGA  78 35
ISU54_RS12325 2809509 .. 2809529 +  -2.5  -3.99062   AGTATCTATAGGCGG            CCAATGTCA GGT TGGTATCGG            TTTCTCCTACGTATT  55 118
        tssF NONE
        tssG NONE
ISU54_RS12360 NONE
ISU54_RS12365 NONE
ISU54_RS12370 NONE
ISU54_RS12375 2823513 .. 2823528 +  -2.6  -3.19192   TATTTAGGTGATCTG              TCTTAA ATGT TTAAGG               TTAAATTGAATAAAA  44 20
ISU54_RS12380 NONE
ISU54_RS12385 2825694 .. 2825731 + -12.2  -2.73994   AATTTTTGAGCGATA   TCACGTCATGCTAAAT AACCCG ACTTAGCATGACGTGG    TCGTATTGGAAGAAT  83 39
ISU54_RS12400 2830361 .. 2830375 +  -8.5  -3.53091   TAATCCGTTTTACTC               CGCCC CCTGC GGGCG               TTTAACAAACCGAGT  71 38
ISU54_RS12405 NONE
ISU54_RS12410 2833183 .. 2833193 +  -5.4  -2.58544   GGGCAATAACAAACA                 CATC CAG GATG                 GTTATCAAGATCAAA  47 172
ISU54_RS12420 2834588 .. 2834607 +  -9.3  -4.11346   GTATTAATTTATTCG            GGGATGG CCTACA CCATCCC             TTATTATTTACGTGT  85 34
ISU54_RS12430 NONE
        dmsB NONE
ISU54_RS12440 2840357 .. 2840376 +  -6.4  -4.60487   TTCCATGTGGTGATT            TACCCGCT GATT AGCGGCTA             TTTTTGCGGCTAATC  77 61
ISU54_RS12445 2841378 .. 2841388 +  -2.4  -2.91264   GGTATTATCTCCTCT                 GCCC CGT GAGC                 TATATCGGTGACAAA  42 4
ISU54_RS12450 2842003 .. 2842016 +  -6.7  -4.13767   ACTGCACCTTATTCA               GTTGG GTAT CCAAC                TTTTGGGGTGCAGCC  71 63
ISU54_RS12470 2845024 .. 2845049 +  -4.8  -2.57344   CCCTTTGTCATCTCC         GAT-CCTGGGA TCATT TTCCAGGCATC         ATTCTGCGCAAAGTA  48 110
ISU54_RS12485 2848586 .. 2848616 +  -9.8  -3.78934   CCTTCTTCCGCATCA       TATCTGCCGGAA CTTATCC TCCCGGCAGATA       TTCTTCTGCGCCCAC  84 41
ISU54_RS12500 NONE
ISU54_RS12505 NONE
ISU54_RS12510 2852993 .. 2853005 +  -3.3  -4.28762   CATCGCTCAATAAAG                CCTGT CAG GCGGG                TTTTCATGGAATTAT  61 52
ISU54_RS12520 2855949 .. 2855962 +  -3.7   -5.4492   ACGATCGCTTAACGA               GGCGC TACG GCACC                TTTTTTGTATCTATA  84 51
        gltX 2858597 .. 2858615 + -12.4  -5.24129   TTTTCCGTGTTATCA             GGCGGCCA CTC TGGTCGCC             TTTTTTGTGCCCAGA 100 50
ISU54_RS12560 2859301 .. 2859325 +  -9.9  -4.53047   ATAGGCGCATATGAA          AAACCTCCGGC TAT GCCGGAGGATA          TTTATTATATTTGAT 100 103
ISU54_RS12565 2859587 .. 2859599 +  -3.4  -3.90588   TCCCGTCTAGCTCCA                CCAA ATTTC TTGG                TTTGATTGAACAATC  53 23
ISU54_RS12570 2859748 .. 2859776 + -14.7  -3.16068   AGCTCCACCACCCTT        TAAAAGACCGGCC TTT GGCCGGTTTTTTG        CTTTTCAGTTCCGAC 100 31
ISU54_RS12575 NONE
ISU54_RS12580 2861137 .. 2861152 +    -9  -2.88677   TTAGCCGGTCTTCAG              CGGCTT CACT AAGCCG               TCTAATCCTTCTATC  67 141
        cysZ 2865441 .. 2865459 + -14.6  -3.97139   ATGATCATTTTCGGT             GGGCGTGT CTA ACACGCCC             TTGTTATTGGGATTA 100 37
        cysK 2866584 .. 2866599 + -10.4    -5.626   CTAAATGCAAAAAAA              GCACCC TTTG GGGTGC               TTTTTTTGTAGAGTA 100 55
        ptsH NONE
        ptsI NONE
         crr 2869688 .. 2869706 +   -16   -4.8048   ACCGATAATAAATAT             CCTCCGGC ATA GCCGGAGG             TTTTTCATATGCGCC 100 69
ISU54_RS12640 NONE
        macB 2876050 .. 2876063 +  -6.7   -4.9645   GCTTTCATCGTGATA               GGTCA TCCG TGACC                TTTTATTGTTATCAT  86 69
ISU54_RS12680 2884514 .. 2884539 + -11.9  -3.66378   ATAAAAGTTCATTTA         TGCTGAGTCAG TACG CTGGCTCAGCG          TTTACATGGGATATG  93 215
ISU54_RS12685 NONE
ISU54_RS12690 2886876 .. 2886889 +  -3.7  -2.65097   TAAGTTTCCTGCCCC               CCCAG ATAA CCGGG                ATATTGTGTCTTGAT  44 96
ISU54_RS12745 2899918 .. 2899943 +    -4  -4.57516   ATAACCCTGTGGTGG         GGGCT-GGGTA ACCTA TACCCGAGACC         TTTTCCTTTCCATCT  66 66
ISU54_RS12750 NONE
ISU54_RS12755 2901884 .. 2901894 +  -8.2  -3.72576   GCAAAATAATAGCTG                 CCGG TAA CCGG                 TTTGCTAAAACGCAG  70 169
ISU54_RS12770 2904476 .. 2904487 +    -3  -4.35675   AAAACAAAATATCCC                TCAT CACC ATGA                 TTTTGATCAGTTTTT  61 203
        yapL 2907082 .. 2907109 + -14.2  -5.53991   AACATACCAGATGAG        TGGTTTCCCGCG ATAA TGCGGGAGACCA         TTTTTTTGCTCAATA 100 43
        hemF NONE
ISU54_RS12795 2910610 .. 2910628 +  -4.4  -4.07568   GCCATCTGATTCACC             AGCGCCAG CGT CTGACGCA             TTTTACGGGCCGCCG  61 495
ISU54_RS12835 2919745 .. 2919755 +  -6.8  -2.51642   GCTCCTGGTTAAGTA                 GCGA CTA TCGC                 CTTCATACATGATGT  55 337
        acrD 2923330 .. 2923355 +  -7.6  -4.20783   AGTCGGTTCTCCCCT         GCGGCATG ACGAAAAAAC CATGCCGC          TTTATTGCATCAGAT  76 85
ISU54_RS12850 2924137 .. 2924154 + -11.3  -2.99854   GCGCAATACTCACCC             TAGGGCG TCCC CGCCCTA              CTTTCTGGCTATTTT  83 77
ISU54_RS12855 2925088 .. 2925110 +  -6.9  -4.58283   GCGGGTAATAAAAAA           GGCAGTGCC TCTAC GGTTCTGCC           TTTTTGCGAGGATTC  79 191
ISU54_RS12890 2933958 .. 2933984 +  -5.1  -3.31831   TAATTGCTCCCTTGG        GGCTGGCC-TTC GCAT GAGTGGCTGGCC         TGATTTTCTCTTTTA  55 124
ISU54_RS12895 NONE
        dapE NONE
ISU54_RS12905 2936286 .. 2936296 +  -5.4  -3.14136   ACCAAAGGAATTTAA                 CCAT GCA ATGG                 TTAGCTGATTACTGG  53 91
ISU54_RS12910 2936508 .. 2936519 +  -7.2  -3.63569   AATAATATTCCATGC                GGCG CTAC CGCC                 TTATTCACCAATTGA  68 51
ISU54_RS12950 NONE
         bcp 2945121 .. 2945132 +  -7.2  -3.12749   AATTAACGGAAAAGA                GCGC TCTG GCGC                 TCTTGAGGTTATTGA  62 69
ISU54_RS12970 2949906 .. 2949918 +  -3.4  -3.93658   GCGTTTTCGTAAATA                TCAG AAGTC CTGA                TTATTTGGGGCTATT  56 13
        arsC 2950771 .. 2950783 +  -3.4  -3.46811   AATTTGGCGCGTAAC                TGCA AAGCC TGCA                ATTTTTCATCATCTG  47 415
        purM 2954173 .. 2954206 +  -4.7  -3.61398   GGGTGCTGAGCAAGT     CATCATTAATCCGTA ATAT TGCTGATTAATCATG      TTGTTCGGCAAGGCG  57 10
        purN 2954924 .. 2954943 +    -5  -3.22409   CGTTTGCCGTTGCAG            GGTTATGC TGCC GAATAACC             TTCCCTTCGTACTTG  51 8
        speG 2955720 .. 2955739 +   -10  -4.20768   AAAATGCTTAATACG            TTGGGGTC AGAT GGCCCCAA             TTGTTTCTTCCCCGT  88 30
        ppk1 NONE
         ppx 2965933 .. 2965962 + -16.5  -2.52676   ACGCTAATAAAATCG       TGCACCGGGTGGT TGTC ATCACCCGGTGCG        TCAATTGACAGCATG 100 45
ISU54_RS13040 NONE
        mgtE 2968200 .. 2968210 +  -2.4  -4.14397   TCAATACATCGAAGA                 CCCC GAA GAGG                 TTTACTTTGTAAAAT  55 461
ISU54_RS13075 2975996 .. 2976011 +  -4.7  -3.05596   TAAATCATTCACACG              TGAGG TAATTT CCTCA               TTGAGTCAAAAAATG  50 213
ISU54_RS13080 2977350 .. 2977360 +  -4.6  -3.24597   TATTCCTACCCCAAA                 TGGC CGT GCCG                 TATTGATTGCCACTT  53 99
ISU54_RS13085 NONE
ISU54_RS13090 2982125 .. 2982146 +  -3.7  -3.85698   TGAACGGACAGGAGC           CACAGTGAA ATTC TTCGCTCTG            TTTATCCAGCGCCCG  56 18
        mdtC NONE
ISU54_RS13100 2986969 .. 2986980 +  -5.8  -2.77899   CCCGTGGCTGGCGCG                CCCA ATTT TGGG                 TGGTTGATCAAGACA  53 360
        baeR NONE
ISU54_RS13115 2989313 .. 2989335 +  -7.7  -4.32046   ACGACCACTTATCCC           TGCGCGG GGCCATTAA CCGCGCA           TTTCATTTTTGCACG  79 85
ISU54_RS13120 2991076 .. 2991103 + -13.5  -5.43553   AGGAACCACCTCCTT        GGCTAGCCCAA TCTCCC TTGGGCTGGCC         TTTTCTTTTTTCCCT 100 179
        yegS 2992643 .. 2992655 +  -6.2  -2.82449   TAAACAGCGGAGCAC                GGCG AGAAC CGCC                CTTGTCTTGCTCCGC  55 220
ISU54_RS13135 NONE
ISU54_RS13140 2994454 .. 2994488 +  -9.3  -3.01791   GAAAATGATGAACAG     GCCCGATGCCCTG CCCCACCTC CAGGGTATCGGCC     TGTTCCAGCGCACGT  63 116
ISU54_RS13150 NONE
ISU54_RS13155 2996947 .. 2996958 +  -3.6  -4.02022   CACCATTTTCAAACC                GCTG GTGA CGGC                 TTTATAGTCCTTCCA  59 421
ISU54_RS13165 NONE
ISU54_RS13170 NONE
ISU54_RS13175 NONE
ISU54_RS13180 NONE
ISU54_RS13185 3000369 .. 3000387 +   -16   -4.8048   CATAAAAATAAATAT             CCTCCGGC ATA GCCGGAGG             TTTTTCATATGCGCC 100 86
        xseA 3006318 .. 3006337 +  -2.8  -3.77722   TGCAGAGGTTGCGCA            CAATCAGG GCAC TCTGCTTG             TTGTTGATAGTTACC  52 273
        yapA 3025673 .. 3025698 + -11.1   -4.7078   TGACTGATAAAAACC         GCAGGGGGCTG CAAT TGGCTCCCTGC          TTTTTACCTGATTAA 100 115
ISU54_RS13275 NONE
ISU54_RS13280 3029636 .. 3029662 + -10.1  -3.82218   CATCCATGTAGGCTC        GAG-CCGCGCCA TCCT TGGCGCGGACGC         TTTACTCCTCTGCCT  84 238
        suhB 3040280 .. 3040303 +  -8.9   -5.7946   CGTTTCAGATAAAAA          GCCAGTCAGG GTTAG CC-GACTGGC          TTTTTTTATTGGGAA 100 56
        csiE 3043565 .. 3043576 +    -3  -3.57106   CATATTGGAACTGCC                TTAG CTGG CTAA                 TTCATTTGGGTTCGC  49 22
        hmpA 3049088 .. 3049113 + -13.4  -2.81218   TACGCACTTAATGCC         GCTGATCAGG AAGGTA CCTGATCAGC          ATTTCGGCTATTTCA  93 63
ISU54_RS13445 3061115 .. 3061143 +  -7.6  -3.29144   TTAAAAGTCAAATAG        CAGCATTCATAA AAAAA TTATTAATGCTG        TTATGCCAAAAATAA  66 190
ISU54_RS13450 3062156 .. 3062167 +    -3  -3.58329   GGCGCGGCTCGAGCC                TACA TGGA TGTA                 TTTACGGCGTCTTTA  51 330
ISU54_RS13455 3062326 .. 3062341 +  -2.6  -3.15544   ATCCTCGCCCCACTC              TTC-TGG GTG CCACGAA              TTACTGACCGTACGG  42 85
        mltF 3068357 .. 3068369 +  -9.1  -2.91695   ACCGCCTGCCCACCT                TGGCG TAG CGCCA                TAATTTCCGCATGAG  63 453
ISU54_RS13485 NONE
ISU54_RS13490 3072046 .. 3072064 +   -16   -4.8048   GTATGCAATAAATAT             CCTCCGGC ATA GCCGGAGG             TTTTTCATATGCGCC 100 82
ISU54_RS13535 3081008 .. 3081018 +  -6.8  -4.26076   CTGAGCCCCTCAATT                 CTGG TTG CCAG                 TTTTCGTGCCAGTAA  71 122
        nadB 3085630 .. 3085653 +  -8.9  -4.08958   ACTTTGTCAATAACC          TCAGGGCGTC TCTAC GACGCCC-GA          TTCTTATTTCACGCT  83 233
        srmB 3088049 .. 3088066 +  -4.8  -4.78237   TGCACGACAACAAAG             CCGCTG CTCACA TAGCGG              TTTTGTTGTCAGATA  74 46
         ung 3091506 .. 3091533 + -10.6  -3.62597   GGACGTTGTCTGTAA        CCTCACGCCA-CC TTC GGCTGCCGTGAGG        TTATTGGAAGATCAG  82 77
ISU54_RS13625 NONE
ISU54_RS13655 3101908 .. 3101921 +  -5.3  -2.84732   GTTATTAAAAAATAC               TACCT CAGG AGGTA                TATCGTGAATTTCAG  50 4
ISU54_RS13660 NONE
        kdpA NONE
        kdpB 3105970 .. 3105999 +  -5.6  -4.07687   ATAAACCGTTTAACC       ACAGCCATCGCA CCCTGA TGCGGTGGCCGG        TTTTAAGACACAAAT  68 131
        kdpC NONE
        kdpD NONE
        kdpE NONE
ISU54_RS13690 3110924 .. 3110941 + -11.3   -4.8622   TAAATTAATCTTAGA             TGACCGC CTGA GCGGTCA              TTTTTAATTGCGCCA 100 90
ISU54_RS13710 3114755 .. 3114784 + -15.9  -2.91065   AGTCGCCTCTTGTAG       GATAATGCCCCTA AAAA TGGGGGCATTATC        TGTGATGTCTATGAT 100 71
ISU54_RS13740 3119880 .. 3119902 +    -2  -3.37344   GCGATATTTATCATT           TTATTGTCTA CTT TAGACTACAA           TTACTTGACTCAAAC  45 54
        crcB NONE
        crcB 3120777 .. 3120798 +  -7.3  -4.34402   TCGTGACAAAAAAAA           CACCCTC ACTTAACC GAGGGTG            TTTTGATATAAACAC  75 62
        hdeB 3123010 .. 3123047 + -12.9  -3.70139   GTAACCTGTAAAAAA   AAGACACTCATTAAGCG TTAT CGGTTAATGAGTGTCTC    TATTTGTTAGCCTTC 100 75
ISU54_RS13840 NONE
ISU54_RS13845 3140493 .. 3140504 +    -3  -2.99871   AAATTGTCCTAATTT                TAAG TATT CTTA                 TAATTTACTATCCCA  44 474
ISU54_RS13860 3142220 .. 3142233 +  -4.5  -3.56868   CGCGGGAAAAGCTAC               GGGTT GAGC AGCCC                TATATTTTGTTGGTA  55 151
        nrdE NONE
        nrdF 3145753 .. 3145763 +  -2.4  -4.81551   AAGATTTCCCCACAC                 GGCG GCC CTCC                 TTTTTAGTCTAGATA  66 39
        proV NONE
        proW NONE
        proX 3150025 .. 3150044 +  -7.2  -5.28176   TTGTCAGCAGTCTGA            CAGATACT TTCG GGTATCTG             TTTTTTATCCCTACC  91 225
ISU54_RS13905 NONE
ISU54_RS13910 3153109 .. 3153119 +  -6.8  -3.02144   ATTAAAAGCACGTAC                 CCTG ATT CAGG                 TATTAGAACCCATCA  58 454
ISU54_RS13925 3153776 .. 3153800 +  -2.9    -3.695   GTCAATTACCTTGGT         GCC-AACCGT GAAGGG ATGGTTAGGC          TGTTTGATTTTGCCA  50 43
        ybfF 3155792 .. 3155807 +  -2.6  -4.28018   CGGTTGGCTAGGGTA              TTATGG CGCG CTATAA               TTTTGCTGCGGTGTT  59 167
        ybfE 3156288 .. 3156317 + -17.3   -3.9978   TGTCGGTTACCACAA       CAGCGTGGTGTAA GTGA TTACGCCACGCTG        TTATTACTTTTATGC 100 44
        fldA 3157228 .. 3157264 +  -9.6  -3.06492   ATCTCCCCGCAACAA    GAAACGCTCTGC GATAGTATTCACA GCAGAGCGTTTC    TGTTCCAGTCACTGG  71 40
         fur 3158046 .. 3158056 +    -4  -4.10161   GTTTTATCGCATTAC                 TCTT ATA AAGA                 TTTTAAGCACTGCTA  61 45
        nagB NONE
        nagA NONE
ISU54_RS13990 3171834 .. 3171849 +  -5.4  -3.42346   GTTGAAAGAAACTGT              CATGGT CACA GCCATG               TTATAGTGACCTATT  57 41
ISU54_RS13995 3172693 .. 3172711 +    -6  -3.67611   GGCCTAATTCCCCTT             TTTAGTGC AGT GCACCAAA             TTCTCTTGCCATCAC  61 75
        asnB 3174846 .. 3174870 + -14.3  -5.47218   ATAGAGAATAGATAG          CAAGGTCGCCT CTG GGGCGGCCTTG          TTTTTTTACGTCACC 100 209
ISU54_RS14005 NONE
ISU54_RS14010 NONE
ISU54_RS14015 NONE
ISU54_RS14020 3175556 .. 3175573 +  -2.8  -3.57792   ATCCCAGCCATACAA             TCTTTT AAGCAA AAAAGA              TTTAAAGATGGCTAC  50 31
ISU54_RS14025 NONE
ISU54_RS14030 3175751 .. 3175766 +  -8.2   -5.1971   GCCAAATTTAGAAAA              GCTCGC TTCG GCGGGC               TTTTTGCTTTTTCAT 100 37
        miaB 3179054 .. 3179077 +  -6.7  -5.07652   TCCCGCCCGCGTAAC          GAGGCACTG CATTGT CAGTGCCTG           TTTTATTTTAGCGGG  86 99
ISU54_RS14045 3180369 .. 3180385 +  -2.1  -2.91474   ACCCCGCTAGAGCAG              GAGGCTC CGT GAGCCAG              GTTATTCTCGATTTA  42 14
        ybeY 3180900 .. 3180928 +  -8.2  -2.65298   AAATTGGCCCAAACC        GTCAGTAGCG TGAATCTAC CGCTGCTGAC        ATTATCATCACTAAC  63 75
        corC NONE
         lnt 3183674 .. 3183694 + -11.2  -3.11178   TCTATTTATACCTGA            TAGCCCTG CACTC CAGGGCTA            TATTCCGCTTAGTTC  79 298
ISU54_RS14065 3185148 .. 3185174 + -15.2  -5.60993   TATTGGTAGACAGGA         TGCGGGGTGG TCGTTCC CCACCCCGCA         TTTTTTTGTCAACCC 100 90
ISU54_RS14070 NONE
        gltK NONE
ISU54_RS14080 3187405 .. 3187428 + -14.6  -2.95933   GCATTAATTCGTTCT          CCTCCCCTGC GTTT GTAGGGGAGG           TCACTTTTATTTTTT 100 34
        leuS 3190866 .. 3190880 +  -4.2  -3.26307   GTTAAGTCAAGGAGG               CGTTGT GCG ACATCG               TATTCTGACGTTGTT  51 36
        lptE NONE
        holA NONE
        nadD 3193259 .. 3193273 +  -2.7   -3.5393   CCCCCTGTGAAATAA               GCACG AACGG CGGGC               TTTCAGCGGCATCCT  48 108
        rsfS NONE
        rlmH NONE
        mrdA NONE
        mrdB NONE
        rlpA 3198633 .. 3198644 +  -2.2  -3.65902   GCAAACAGGGTGTTA                CGGT TAAA ACTG                 TTTGGGTGAAATAAG  49 101
        dacA 3200272 .. 3200289 + -12.7  -3.72405   GCGAACAGTACGTCA             CTCCCGC TCCG GCGGGAG              TTGTGATTTTATAGC 100 135
ISU54_RS14140 3200786 .. 3200802 +  -9.3  -2.66435   ACTGTCAAAATAGTG              GCCCCAC TCA GCGGGGC              TGGTATACTGGCGCT  68 188
        lipB NONE
        lipA 3202766 .. 3202786 + -11.9  -5.93809   GCAGCCACCAAAAAA            CGGATTTCC ATT GGAGATCCG            TTTTTTTTATCAGCC 100 97
        crcB 3204467 .. 3204484 +  -9.8  -4.61231   GCTACCCATAAAAAA             CCCGCC CAGTAA GGCGGG              TTTTTAAAGATATGG 100 410
ISU54_RS14170 3205635 .. 3205659 +    -5  -4.12188   AGAGGCTGATCGTAG          CGGTATCGTT TTAGC AACGGTAACG          TTTTAGCAATGGTAA  63 188
ISU54_RS14180 3207928 .. 3207941 +  -3.9  -3.54755   TCCATTGGTGCCATT               TTCAA TTTT TTGAA                TGTTGTTTAAAACAT  51 166
ISU54_RS14185 3208452 .. 3208475 +  -2.5  -3.96068   GATTAAAGTTAAATG          GTTATCATT CAACCT AATGCTAAC           TTATTATTAACCTAA  54 326
ISU54_RS14195 3209466 .. 3209479 +  -3.8  -3.73775   TAACTTAAGCCCCCG               CTCG CCAACC CGAG                TTTCATAACCATCCG  54 398
ISU54_RS14205 3211623 .. 3211641 +  -7.4  -2.56914   GGCACCATGACCACC             TCGCGGTT GTA AACCGCCA             TACATTCATCAAGTG  55 382
ISU54_RS14260 3226321 .. 3226331 +  -5.4  -3.03035   AACTTTACGGCACGG                 CGAA AGA TTCG                 GTTCTTGTCTTTCTA  52 190
ISU54_RS14265 3227337 .. 3227351 +  -5.8  -3.86106   GGGATATGGGCAAAT               TAAAAC TCC GTTTTA               TTTAATACTTGCTGT  63 23
ISU54_RS14270 3233740 .. 3233758 +   -16   -4.8048   CTGAAAAATAAATAT             CCTCCGGC ATA GCCGGAGG             TTTTTCATATGCGCC 100 41
        pbpC 3236949 .. 3236961 +  -4.7   -2.6155   TGAGTAACCAGCAAA                CGGCC GGA GGGCG                GTTCCTCTTGCCGCG  48 119
ISU54_RS14295 3239337 .. 3239347 +  -4.6  -2.91032   CATCGTATTTTCCAT                 CGGG GTT CTCG                 TAATCTTATTCTTGT  50 126
ISU54_RS14300 3239942 .. 3239961 + -10.8  -3.25823   TATAAATATGTTCAA            GCACACTT GAAA AAGTGTGC             TTGATATCAGAAACG  73 97
        yapC 3243853 .. 3243864 +    -3  -3.58329   GGCGCGGCTCGAGCC                TACA TGGA TGTA                 TTTACGGCGTCTTTA  51 146
ISU54_RS14325 3244203 .. 3244214 +    -3   -2.9462   ACAAACCAACCTTCA                TCAA TAGT TTGA                 TAATTTCAGTAAATA  44 250
ISU54_RS14330 3244931 .. 3244947 +  -2.1  -4.14633   CGAAAGCCGAATCCT              GTAGTGC CTC GCCCAAC              TCTTTTTTGCCAATA  55 108
ISU54_RS14345 NONE
ISU54_RS14350 NONE
ISU54_RS14355 3252464 .. 3252475 +  -5.8  -2.77166   GCCAACAATGACCAG                CCCA TTCC TGGG                 AATTTTTTCAGATCC  51 309
ISU54_RS14365 NONE
ISU54_RS14370 3256255 .. 3256280 + -13.4  -3.15544   TCGCTCAAATTTCAT         CTGGCTTACG ATAATC CGTAAGCCAG          TTAATCCGAATAACG 100 54
ISU54_RS14380 NONE
ISU54_RS14385 3259237 .. 3259254 +  -7.7  -2.51888   TTAGACCCCCAAAAA             CGGGAAGC CCT GCT-CCCG             GTATTCGATTTCAGC  60 193
ISU54_RS14430 NONE
ISU54_RS14435 3267003 .. 3267034 + -12.4  -5.28176   GATAAAATATTAAAA      TGGCCGGAAGTTAA TGAT TTAGCTTACGGCCA       TTTTTTATGGCTCCC 100 52
ISU54_RS14440 NONE
ISU54_RS14445 3268133 .. 3268155 +  -4.8  -3.05384   AAAATCAAAACCAAT           CCAGCCAAGA GCG TTTTGGTCGG           TTGCGTGGCAAGCAA  50 235
ISU54_RS14450 3268377 .. 3268393 +  -7.2  -4.89567   TAAATCACTACCTGA              CCCGTC TAAAT GGCGGG              TTTTGTATTTTAAGC  85 38
        folD NONE
        ybcJ 3269860 .. 3269878 +   -16   -4.8048   TTGAACAATAAATAT             CCTCCGGC ATA GCCGGAGG             TTTTTCATATGCGCC 100 73
        ppiB NONE
ISU54_RS14485 NONE
        purE NONE
        purK 3275807 .. 3275819 +  -3.3  -2.63382   AACTCCTGCCTACGC                TGGCG CAT CCCCA                CTTGTACCTGTGCCA  40 364
        tesA 3279429 .. 3279440 +  -2.2  -4.43397   GCGGTAATTAAGGTA                GC-CC CCA GGAGC                TTATTTATTTTAAGG  60 224
ISU54_RS14515 NONE
ISU54_RS14520 3281390 .. 3281412 + -13.4  -4.52703   TACCATCATTTGCTA           CTGCGCGGGG CAA TCCTGCGCAG           TTTTATGCTGCTTTC 100 76
ISU54_RS14525 NONE
ISU54_RS14530 3282957 .. 3282988 + -18.2  -4.06419   GCAGTAAACAAACAG      CCCGAATCACTTAC TCTG GTAGGTGATTCGGG       TTATTTATCACGGCA 100 82
        copA 3286534 .. 3286572 + -17.6   -2.5547   AAATGCTTTCAGTGA   CCTCAATGGCGCACAATA TCG TTTTGTGCGCCATTGAGC   GTTGATATCCAAAAT 100 39
ISU54_RS14545 3287993 .. 3288004 +    -3  -2.81326   AACTGACATTAATCA                TTAC CGAA GTAA                 CTTATTAACATTATG  43 168
        ybaK 3288769 .. 3288780 +    -3  -3.58329   GGCGCGGCTCGAGCC                TACA TGGA TGTA                 TTTACGGCGTCTTTA  51 201
ISU54_RS14555 3289444 .. 3289460 +    -3  -4.66987   TGCATTGAAATTGAG             CGTAGCC ATAC GG-TACG              TTTTATTAGGATCTA  65 300
ISU54_RS14565 3292555 .. 3292583 +  -2.6  -3.16881   GCCAAAGAAGACATT       TAC-CGATAAAAA TTAA TTTTTATCGCGCA        TTGATCGCATAAATG  44 156
ISU54_RS14570 3294395 .. 3294425 +   -14  -3.49102   TCTGTAATAAAAACA       ATCAGGGCCAGCTT ACT ATGCTGGCCCTGAC       TTATATCCCGCGTCT 100 70
ISU54_RS14705 3325707 .. 3325720 +  -2.5   -4.4009   ACGCTGGTCACGATT               TATTA TCTA TAATA                TTTTCTGAACTAAAA  59 70
        rsmS 3326012 .. 3326037 +  -8.3  -2.75267   CTTCTGATGTGTACT         GAGGCGA-CTCG GCA CGACATCGCCTC         TGCTATTCCCGCTTT  64 49
ISU54_RS14730 NONE
ISU54_RS14735 3335542 .. 3335557 + -11.8   -5.1356   TCATTTCATACTAAA              GGCCGC GCAA GCGGCC               TTTTTATTGCTGAGC 100 58
ISU54_RS14740 NONE
        rpmJ 3336207 .. 3336235 +  -6.7  -5.24551   CATCAGTCCCCAAAA       GGCCCTTTGTGC ACTAAC GC-CAACGGGCC        TTTTTATTCATTTGC  88 118
ISU54_RS14750 3337320 .. 3337335 +  -2.6  -3.36968   TAGTAATGACAGGCC              TTC-TCC TGC GGATGAA              TTGTAAGATTCCGTA  46 4
        tomB NONE
ISU54_RS14760 3338155 .. 3338173 +  -8.9  -3.11999   GACACACAACGTTGA             GCCGATA ATCTC TATCGGC             TTCAATGGGTTTGAT  69 60
ISU54_RS14770 3339889 .. 3339903 + -11.4  -3.44146   GTTCACGAATATTCA               CGGTCC CAT GGACCG               TTGATTGTGCGACCG  77 517
        tesB 3341230 .. 3341260 + -16.3  -3.34242   GAATCAATGAAATAG      C-ACAGGGGCGATG TCAC CATCGCCCCTGTAG       TTCATCATTATTATG 100 84
ISU54_RS14810 3349257 .. 3349284 +  -4.9  -3.08812   AAGGTTAAATCAAGA        TGGTGGC-TTAG TTTTT CTAAAGCCACCC        CTTTGTTACAACCAC  48 463
ISU54_RS14820 3351818 .. 3351829 +  -5.8   -3.4277   AAGCAACCCAATGGA                GGGT GACT ACCC                 TTCTGCGTGTTAACT  59 183
        queC 3352974 .. 3352986 +  -3.4  -2.53876   ACGATAAAAGCAATT                TGGT GCTCA ACCA                TCCATTGGAATACGG  40 376
ISU54_RS14875 3364887 .. 3364919 +  -3.4  -2.78523   ATAGTTGCTCAACAG     AATGCTCTGCC-CGA TACC TTGCGGCAGAGCAGG      TAGATTTATTATGCC  43 100
        ampG 3366431 .. 3366458 +  -3.4  -5.59879   CATAAGTGACATAAA        GCCGGTGC TGTTCAGTTTGT GCACTGGC         TTTTTTGTGTTTATC  86 48
ISU54_RS14885 3367482 .. 3367512 +  -9.1  -3.51998   ACTATAACTAAATGA      TTCCGAGGTG-CCT ATTT AGGACACCTCGAAA       TATATTTTAATTTAC  73 40
        cyoA NONE
        cyoB NONE
ISU54_RS14900 NONE
ISU54_RS14905 3371703 .. 3371717 +  -2.8  -3.05596   TTATGTACAACCTCA               ACATCA ATA TGATGG               TTGACTGAAGAGCTG  43 3
        cyoE 3372661 .. 3372691 + -17.7  -4.46072   AGTGAAATAAATCAA       GTGGCTGGCAGGA ATCGC TCTTGCCAGCCAC       TTTGTATTTGTTCCC 100 60
ISU54_RS14915 3374504 .. 3374533 +  -6.3  -3.86944   TAGGGCCAGAATTAA       GGGGCAAAGACAT GAAA AAGCCGTTGCCCC        TTTAGTCGTTATACC  65 55
        panE NONE
        yajL 3377132 .. 3377142 +  -3.2  -3.56643   GACTTGTTCACGGCT                 TTGC TGT GCGA                 TTTCACGGATATCAA  49 372
        xseB NONE
        ispA NONE
         dxs 3381928 .. 3381946 +   -16   -4.8048   AGAAACAATAAATAT             CCTCCGGC ATA GCCGGAGG             TTTTTCATATGCGCC 100 105
ISU54_RS15040 3397951 .. 3397967 +  -2.2  -4.08216   CGGTATAGCTACTGA              GTGCAG CCCAC TTGCGC              TTTTCAGCGAAATAG  55 132
ISU54_RS15045 3398786 .. 3398809 + -12.5  -5.44119   CTCGGGGGCTATCAA          GCCAGTCAG TTCACT CTGACTGGC           TTTTTTTCCCCTAGA 100 66
ISU54_RS15060 3402396 .. 3402409 +  -3.8  -3.74693   GCGCCATTTGCATAC               GGGT TTTATC ACCC                TTTAATAAGGTAAGA  54 477
        sbcD NONE
ISU54_RS15100 3416006 .. 3416021 +    -9  -2.80492   TAGCCCACAGGGTAA              GCCTCA AGGA TGAGGC               TCATTAATCCTGATG  67 126
        rdgC 3418900 .. 3418911 +  -2.2  -2.97439   GTACTTTCAAAGAAC                CGGT GATT ACTG                 TCATTTCCTCCGCTT  41 401
ISU54_RS15170 NONE
ISU54_RS15175 3431289 .. 3431311 + -13.6  -5.26875   AATCGTCTCTATCAG           CGGGTATTAT TCT ATAATACCCG           TTTTTTAATTCAGAA 100 39
        pepD 3436298 .. 3436320 +  -5.5  -3.76952   TTAGCTTAACGCCCT           GCCGGGC AATGTGTAG GCTCGGC           TTTACCTTACGTAAA  59 342
ISU54_RS15195 3438532 .. 3438572 + -19.1  -3.32844   GACAATAATTGAGCA  ACAAAGCCCCCGAACAATG ATG CGTCGTTCGGGGGCTTTGC  TTGTCAGATAAAAAA 100 101
ISU54_RS15240 3447116 .. 3447137 +  -8.7  -3.91084   AATAAAGCAAATTCA           CCTGGTGCA ATTT TGTGCCAGG            TTTCATTACCGGTCA  75 36
        fadE 3451354 .. 3451379 +    -9  -4.82128   TATCGAAATAATCAA         CCAAGCCTCC CATTAA GGAGGCTTAG          TTTTATGTTTAATAA 100 65
ISU54_RS15295 NONE
ISU54_RS15300 NONE
        hpxX NONE
ISU54_RS15340 3473420 .. 3473431 +  -2.2  -4.00042   GGTTGGTCAGCGCGC                CGGT GAGT ACTG                 TTATTTGATAGGACC  53 6
        hpxZ NONE
ISU54_RS15350 3475480 .. 3475504 +  -2.1  -3.01119   TAATGTTACATAACT          GATGAGTTTGC CCT GTAACCTAATC          TATCTATAGCTAACT  42 143
ISU54_RS15355 NONE
        ygaH NONE
        mprA 3477373 .. 3477388 +  -8.2  -3.33766   ACATAACGGGGAATG              GGCGCC TTTT GGTGCC               ATTTGTTTATGAATG  69 81
        emrA NONE
        emrB 3480480 .. 3480534 + -17.3   -3.3095   TTTTTAGCCAAATAG CGGTCAACAAAAAAGGGGGCCCTGA ACTCA TCAGCGCCCCCTTTTATTTTTACCG TTCTAAAACGTCTCT 100 58
        trxC 3482551 .. 3482575 + -11.5   -3.5241   TTTCTGTCGGGGCGT          GGGCCATTCTA TAT TAGAATGGCGC          TATTTCTCAGGAGTC  89 151
ISU54_RS15390 NONE
ISU54_RS15395 3486162 .. 3486175 +  -4.5  -3.05384   AGTGTTTTTTTGATA               TGGCG GTTT TGCCA                TTAAATAACAAGAGA  50 158
        pssA 3487576 .. 3487592 +  -4.3   -4.3467   GTCTTAAAGATAAAA              CCCGGTG AAT TAGCGGG              TTTTCATCTCCCACT  63 41
ISU54_RS15405 3488306 .. 3488340 +  -9.2  -4.50627   TGTGTTTCGCGCACA     GCAAAAACCCCACGCT TTG GGCATGGGGTCTTGGC     TTTATTTGATGCCTG  95 368
        bamD 3499374 .. 3499391 + -12.7  -4.37198   AAATGAAAACACCAA             CGGCAGC TCAG GCTGCCG              TTTTCAATTTAGGTT 100 53
        raiA 3500092 .. 3500107 + -11.8  -4.87291   CTAATTTCGGTGTAA              CGCGCC TTCG GGCGCG               TTTTTAATTGACATC 100 54
ISU54_RS15470 NONE
ISU54_RS15475 3503858 .. 3503870 +  -6.9  -2.85668   GACAGGTAGCGAAGC                GGGCG GTG CGCTC                TATAATCTGCAAGTG  57 103
        yehT 3507559 .. 3507571 +  -4.8  -2.78216   CGTCAAGCTGCATGT                GCGT TGGCT ACGC                TCGTTACTCCGGGTA  49 75
ISU54_RS15505 3510576 .. 3510594 +   -16   -4.8048   AGCACAAATAAATAT             CCTCCGGC ATA GCCGGAGG             TTTTTCATATGCGCC 100 229
ISU54_RS15540 NONE
ISU54_RS15545 3517307 .. 3517325 +   -16   -4.8048   AGTTTAAATAAATAT             CCTCCGGC ATA GCCGGAGG             TTTTTCATATGCGCC 100 64
ISU54_RS15625 3529858 .. 3529870 +  -4.9  -2.85668   TACAACGCCATCACC                TCATT CAC AATGA                TATGATGTCACAATG  49 13
ISU54_RS15630 3531160 .. 3531173 +  -4.5  -4.10164   GCGTCATTGGGGTTT               GTCAG CAGT CTGGC                TTTGTATCGTGATCC  63 123
        katG 3543308 .. 3543337 +  -8.7  -3.85698   AAATAACTAACTAAA       TAGAGGGGAGGA TTTATCT TCC-CCCCTCTA       TTTATAAGAGAAGAA  78 31
        cybC NONE
        cybB 3544474 .. 3544493 + -13.6  -4.09685   TGTTCCGTTTCTCTT            TGTCCCGC GTTT GCGGGACA             TTTTAAAGAATGCAA 100 59
ISU54_RS15715 NONE
ISU54_RS15720 3553449 .. 3553467 +   -16  -3.07307   ATTGTGCCCAGAAAA             CCCCCAGC TAG GCTGGGGG             TTCAGTAAAGCTTTC 100 145
ISU54_RS15725 3554112 .. 3554144 + -11.3  -4.07687   CCTTATAGGCGCATA      TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA      TTTTCGACCCGCGGT 100 99
ISU54_RS15730 3555689 .. 3555700 +  -2.2  -2.90615   CAACAGCTGGCGGAG                GTCA TCAA TGGC                 TAATTTCGGCAGACT  42 11
ISU54_RS15735 3556676 .. 3556690 +  -2.8   -2.8733   AGAAACTGATGTTGG               CTTTGT CTG ACAGGG               GTGTTTTATGAAAAA  42 16
ISU54_RS15740 3557745 .. 3557763 +  -7.4   -4.0641   AAGTGATTGGGATTC             CAGTGAGC GCA GCTAACTG             TTTATGTAGATAAAC  72 35
ISU54_RS15745 NONE
ISU54_RS15750 3560607 .. 3560625 +    -3  -4.49314   CTCGTGACTGGGTAC             GCTTTGGC TCT GCTGATGC             TTATTTTTGATGATG  63 303
ISU54_RS15755 3562439 .. 3562470 + -10.2  -4.36595   TTAAGCGGCTATCAA      GGCCTGAGTTCT TCATTCAC GGAGCTCAGGCC       TTTTCCGTTTCAGTG 100 94
ISU54_RS15760 NONE
         map 3563757 .. 3563789 + -13.6  -3.08073   CGTCATCGGGGGTTG      TCTGCAGAATGAAG TTATC CTCCATTCTGCAGA      TGTATTAGCGCTGCT 100 196
ISU54_RS15780 NONE
ISU54_RS15785 3569679 .. 3569690 +  -4.4  -2.78018   GGAAAGTTTGACCGG                GGAA TATA TTCC                 TCATTCCTGAGCAAT  46 4
ISU54_RS15790 3570789 .. 3570803 +  -5.8  -2.83271   TTAGAATATATTTTT               TAAACT AAT AGTTTA               TAATTATAAAAATAG  53 279
ISU54_RS15795 NONE
ISU54_RS15800 3571665 .. 3571677 +  -2.6   -4.2704   CTAAAAAAAAAGCCC                CGCC AAGTA GGTG                TTTCTTCGTCATAAG  59 54
ISU54_RS15805 NONE
        arsB 3573713 .. 3573735 +  -9.8  -3.15027   CCTATTAGCATTGCC           GCCAGTAGGG TTA CTCTCCTGGC           ATTTTGATGAAGGAT  74 140
ISU54_RS15815 3575163 .. 3575200 +  -5.5  -3.65522   ATAAAAAGACCAATA   GCGATTGGGGCAGTC TCGTGACT GAGTGCCCACATCGC    TTCTTCACCTGAATA  59 64
        rpiB 3580143 .. 3580153 +  -8.2  -3.67022   TTCAGCTCAGATGCG                 GGGC AGT GCCC                 TTCATTTCTGATTTG  73 267
        mutS 3583520 .. 3583547 +  -7.1  -4.05193   CAAGGCATAAAAAAA        CGGTGAACA TTTATCTATC TGTTCACCG         TTGTTGTGTTTCATC  72 295
ISU54_RS15920 NONE
ISU54_RS15925 3596810 .. 3596830 + -14.7  -3.14931   GTTTGTCAGCAGTCT            GGGGGCGCT CTT AGCGCCCTC            TTAATGAGCCATAGA 100 224
        queD 3602307 .. 3602326 +  -5.6  -3.56704   ATGCTTCGATATCTC            GTAACCGG CCAA CCGGATGC             TTAATTTCATCCGCA  56 435
        barA 3614112 .. 3614124 +  -3.3  -4.25104   TTGCCATCACGCAGC                AGACC CAA GGTCA                TTTTGCTGCCAACAG  59 515
        mtnN 3617900 .. 3617918 +    -3  -3.21416   TCAAAGCCATGTTAA             CCACCTTG GCG CAACGCGG             TTAATGATGCCACTG  46 3
        btuF NONE
ISU54_RS16020 3619417 .. 3619440 +  -8.8  -5.03715   TTTGAGCATAAAAAA          CCGCTGCCAT TCTC ATGGTCGCGG           TTTTTTAGCGATGCT 100 64
        hemL 3623510 .. 3623527 +  -9.9  -3.58343   GTCAATAACCTCTAA             TCTCCTC TCCG GAGGAGA              TTTCAGACTGCTGAC  80 278
        thpR NONE
        sfsA 3634560 .. 3634574 +  -7.1  -3.68827   TAGCGGCCTGATTTT               TCCCC CTATT GGGGA               TTTCGATAGTGCGTA  68 146
        dksA 3635099 .. 3635128 + -17.9  -3.66803   CGGCATAATGTGTAA       CACGGTGCCAGAG CCCT CTCCGGCACCGTG        TTTGAACTGTTGGAC 100 60
      gluQRS NONE
        pcnB 3637851 .. 3637870 +  -6.4  -3.10098   GCCCACGCAAGCCAG            TACCCCGT AAAG AAGGGGTA             TAATTTTACCATGAT  57 3
        folK 3638441 .. 3638451 +  -5.4  -3.29549   ACTCTGCCCGTGCGT                 TGAG CCA CTCA                 TTACGTTATATTGAT  55 106
        panB 3639402 .. 3639413 +  -4.4  -2.53995   GGGGGGGATTTATCC                TGCT GAAG AGCA                 TACATTCCAGTAACT  45 1
        panC 3640500 .. 3640513 +  -2.3   -4.2828   CGGAACCCGTGACCG               CCGAT GAGC AACGG                TTTTGGTGAGTGAGA  58 157
        panD 3641327 .. 3641337 +  -2.4  -4.07568   TCCATTTCAATCACT                 GCGG GTG CCGG                 TTTTACCGCAACCGG  53 193
         can 3645851 .. 3645866 +  -3.2  -3.05844   CCACGGATATCTTCA              TCCAGA TCTT TCAGGA               TCTTCACATCGCGGG  44 456
ISU54_RS16140 NONE
        speE NONE
        speD 3650787 .. 3650797 +  -3.2  -4.32049   GCACTTTTATTGAAC                 GCGA GAG TTGC                 TTTTGATGGGTTATC  61 338
        yddG 3652206 .. 3652220 +  -5.6  -2.56596   CTTTGATCTCTTCAT               TCAGCC AAT GGCCGA               TCACTTCATGCCCCA  47 411
ISU54_RS16195 3665653 .. 3665683 + -19.8  -3.02511   CCGCTAGTTAACCCT       ACCTAGGCCAGCAC TTA GTGCTGGCCTAGGC       TATTGACAAAGTACC 100 65
        nadC 3668800 .. 3668814 +  -2.8  -4.11216   GATAGCCATTATTAT               CAGG TCAATAT CCTG               TTTTGCGAGTGCCGC  57 63
        ppdD NONE
        gspE NONE
        hofC 3672141 .. 3672161 +  -5.5  -3.31792   CATATTCCAGTTAGG            TGATGTTAT TGG ATAACCTCA            TTATGGACCTAGTGG  55 10
        coaE NONE
        zapD 3675277 .. 3675291 +  -2.1  -4.48072   CGTTTATCGTTTGAA               TTAGC CTGCT GCTGA               TTTTGTAATAAGTGT  60 11
        yacG 3675774 .. 3675792 +   -16   -4.8048   TGTTTTAATAAATAT             CCTCCGGC ATA GCCGGAGG             TTTTTCATATGCGCC 100 116
ISU54_RS16255 NONE
ISU54_RS16260 3678408 .. 3678433 + -11.3  -3.68619   TAACTCTGAGCGGTT         TTGCATCAGAG CATC CTCTGATGTAA          TTTCAGTAAATTCCA  82 190
        pepA 3687182 .. 3687199 + -11.3  -3.80625   TTGTTAGCAGTCTGA             GGGCACA TTTT TGTGCCC              TTTACGTTGTAGAGA  95 139
ISU54_RS16300 NONE
ISU54_RS16305 3690605 .. 3690643 + -14.7  -4.66833   ATCAGTCAGTCGTCA   CCAGGGGCCATGATAAT TATTC ACTATCATGGCCCCTGC   TTTTTACCATTGCAC 100 52
ISU54_RS16310 3691256 .. 3691270 +    -7  -3.21099   CCTGCAAGAATTTCA               GGGCGC CAT GCACCC               TTAATGATGACAAAA  59 57
        argF 3693379 .. 3693401 +  -5.6  -2.78032   GAAGCTCAAGCTGGC           CAGTGAGATA GCC TATTTCACCG           CTATTTTAACAACCG  53 320
ISU54_RS16335 NONE
ISU54_RS16340 NONE
ISU54_RS16345 NONE
ISU54_RS16350 3699994 .. 3700017 + -10.2  -3.24245   AGCATCCACATCCCC          CTCGCAGCCC TGAT GTGCTGCGGG           TTGCCTTGTGGATAA  78 390
        nrdD NONE
        nrdG 3703042 .. 3703059 +  -7.7  -2.58544   AAACAGCCAGCATTA             CGGTGAG AAAA CTTACCG              GTTATCAACATGACA  60 225
        phnF NONE
        phnG NONE
        phnH NONE
ISU54_RS16380 NONE
ISU54_RS16385 NONE
        phnK 3708075 .. 3708100 + -11.9  -2.52543   AGCAAAGCCGCAGGT         GCAGGAGGGGCG GCC TGCCC-TCCTGC         TCGATTGCAGGCACT  81 277
        phnL NONE
        phnM NONE
        phnN NONE
        phnP 3711502 .. 3711520 +  -6.7  -3.55444   CTTGTGCTACATCTT             TGGCGTT AATCA AGCGCCA             TTTAGCCGGTAACAA  62 139
ISU54_RS16450 NONE
ISU54_RS16455 3721951 .. 3721961 +  -6.8  -2.93929   TTTGCCCCGCGTCTA                 CGAC GTC GTCG                 TCTACTCTCTGTTTT  58 67
ISU54_RS16460 3722883 .. 3722905 +  -4.1  -3.01712   CTTCCACGGCCAGTG           GTGCCAATG CGACC CATTGGCGA           TCTTCACCGCCAACC  45 481
ISU54_RS16475 NONE
ISU54_RS16480 3725840 .. 3725884 +   -16    -4.183   ACGGCCTTGCCTTAT CAAGTAATAACAGGGAGGTCA TTGC TGGCCTCCCTGTTATT-CATG TTTATTAACGCTTAA 100 41
ISU54_RS16500 3733448 .. 3733463 + -10.4  -4.82855   TGTCAGCAGTCTGAA              CCAGCC CGAA GGCTGG               TTTTTACGTTTAATC 100 248
        yhbY 3754433 .. 3754458 + -10.5  -4.88405   ATGCACTTTGTTCTG         ATAAAAGGCCG CTTG CGGCCTTTTAC          TTTTCTTTACAACTT 100 67
        dacB NONE
        pmrA NONE
        pmrB 3758739 .. 3758763 +  -4.1  -2.68487   CAGCACAATGCATTC          ACATTGTCGCG ATT CGCGGCAGAGA          TCATGTAGTACTTAC  43 331
        ispB 3762622 .. 3762640 + -10.3  -3.93236   GAAATTATTTAGAAA             CCCGGAT TCACC ATCCGGG             TTTATCCCATTAATG  89 53
ISU54_RS16665 3763595 .. 3763627 +  -7.8  -5.08178   ATCATTACAATATCA      GGGGCTACTG TTCGTACTCTTTT CAGTAGCCCC      TTTTTATCTCTATAT  95 123
        argR 3765832 .. 3765850 +  -7.4  -3.49475   CACCGAGCAGTAAAA             TGCGGC CTTATGT GCCGCA             TTATCTCACCCTCGC  66 54
        yhcN 3766651 .. 3766670 + -12.2   -3.6581   GTCAGCAGTCTGCAA            TGCCCCAT TAAC ATGGGGCA             TATTTTCAAGATGAT  93 221
         fbp 3769357 .. 3769377 + -11.1  -5.72622   TCAAAAATAAGCTAA            CAGCGGCCT TTT AAGCCGCTG            TTTTTTATTTCTAAC 100 65
         ppa 3770069 .. 3770120 +  -9.4  -5.84381   TCGCCTATAAAAAAA CACCGCCTATCGTGAACAGGCCCCA AAA TAGGGCC-GTTTACCTTGTGCGGTG TTTTTTTGTTACTGC 100 50
        msrA 3777090 .. 3777111 +  -4.4  -2.89881   TAACGTGTAAGGCTG           GCAGT-GCG CTCAT CGCTGCTGC           TATCTCCCATCGCTG  46 31
ISU54_RS16720 3778733 .. 3778752 + -12.1  -2.77658   TCACGGTAAACATAA            CGGCCCC TGAGTT GGGGCCG             TGATTAAATCTGCTC  83 65
ISU54_RS16730 NONE
ISU54_RS16740 3783131 .. 3783187 + -15.7  -3.02096   GGAGTTATATCACAA TCTATAACATGCATTTATTATGCATGT TAT AGGTGTATAATAAATACATGTTATAGA TATATAATTACTCAA 100 96
        ytfE 3783935 .. 3783953 + -14.6  -3.62275   TAAATAAACGCCAAA             GGGCGACA CCC TGTCGCCC             TTTGGCATAATCGGT 100 80
ISU54_RS16755 3785774 .. 3785801 +    -2  -3.85698   TATTTCTTGGATAGT        TATCGCTATCTG CAGG CAGATAACCGTA         TTTATAAGGAGAGAG  51 118
ISU54_RS16760 3786299 .. 3786317 +   -16   -4.8048   AACCAAAATAAATAT             CCTCCGGC ATA GCCGGAGG             TTTTTCATATGCGCC 100 48
ISU54_RS16795 NONE
ISU54_RS16800 3791479 .. 3791493 +  -2.1  -2.50994   TCACTTTTCATCCGT               CGTTG ACAGG TAACG               GTTGCTGGCGTTGGC  39 84
        bsmA 3792122 .. 3792141 +  -3.6  -2.55351   TAAGGCCTTGCTGTA            GCGATA ATGTTTGC TATCGC             GTTAATGTGCGCCCG  44 76
        queG 3813106 .. 3813136 +    -7  -5.40464   CTATTCCCGCGTCGC       CTGTATAAATACCC ATT GGTTATTTATACAC       TTTTTATTTCTGATG  89 418
        rsgA 3815761 .. 3815789 +  -5.8  -4.38141   GAAGGGTCTGACAGG        GTGGGCGCAGAG CGATA CAATGCGCCCCC        TTATTTTATCTAACG  70 164
         psd NONE
        mscM 3820112 .. 3820138 +  -5.9  -4.97405   AGTAAGAAATAAAAA        TGCCCTGCGCCT TCAC AGGT-CAGGGTA         TTTGTTTTTGTAAGT  82 49
        frdA NONE
ISU54_RS16940 NONE
        frdC NONE
        frdD 3825002 .. 3825024 + -13.4   -4.0825   CACATGCCATATTCG           CGGCCTGCTG TTC TGGCAGGCCG           TTCTTTGGTTAAAGC 100 51
        epmB 3827530 .. 3827549 +  -7.9  -2.50589   TTGTCAGCAGCCTGA            GGGGATA CCTTAA TATCCCC             CTGCTTTGTTTACGA  60 223
        aspA 3833367 .. 3833395 + -10.4  -5.04601   TCGGTAGCCCTCTAA       GGCACGCATGCTCC TCT GGA-CA-GCGTGCC       TTTTTACTTTCTGGC 100 50
ISU54_RS16995 3834772 .. 3834794 + -13.4  -2.56571   TCTGTAATCTGTCTG           ATGGGGCGCA TCA TGCGCCCCAA           TAACTTCGGTCTATC  91 34
        cutA NONE
ISU54_RS17005 3837501 .. 3837523 +  -6.2  -2.78715   TTTTAGCGTGCCGCA           GTTACCGGTC ATT GAGCGGCAAC           TGTAATGCCCCACTT  51 456
ISU54_RS17025 3842920 .. 3842930 +  -2.4  -4.86773   TAAACTTTACGGCAA                 GCGC CGG GCGA                 TTTTTCCTACTTTTG  66 53
ISU54_RS17030 3843124 .. 3843143 + -11.4  -4.84527   ACCATTATTTATAAG            GCCTCGCT GCAA AGCGGGGC             TTTTTCGTATCTGGA 100 37
ISU54_RS17040 3846989 .. 3847004 +  -7.5  -5.05116   TTTAATGTCAACGAA              CCCGC CAATGT GCGGG               TTTTGTTATTTCTAA  89 61
        rhaT 3848912 .. 3848936 + -10.8  -3.76568   AGATGATGATATTGA         CGGGCAGCGTT GAAA AAC-CTGCCCG          TTATCTTATGGCTAA  88 94
        rhaB NONE
ISU54_RS17075 NONE
        rhaD NONE
        fucO NONE
        rhaM 3856472 .. 3856495 +    -8   -2.7497   ATTCCTGAATACTAG          AACCGCGCCA TCCG TGGCGCGGCC           GTTTAAAGCTAATCT  61 162
        uvrA NONE
ISU54_RS17125 3866725 .. 3866752 + -12.7  -2.78395   TACATGATTGAAAAA        CAGAGGGCCCC GATTAA GGAGCCCTCTG         TCATTACACTTTCTT  89 64
         zur 3869689 .. 3869710 + -10.1  -4.02817   GAATCATGAAATAGA           GCCGTACCT CAAC AGGCACGGC            TTATTATTCTGGGAG  86 148
        plsB 3873477 .. 3873495 +   -16  -4.42653   CTCAATGCTTAACAG             CCCCCTGC CTA GCAGGGGG             TTTTCTGAATACCAT 100 53
        yapK 3880050 .. 3880076 + -10.1  -3.82218   CATCCATGTAGGCTC        GAG-CCGCGCCA TCCT TGGCGCGGACGC         TTTACTCCTCTGCCT  84 254
ISU54_RS17235 NONE
ISU54_RS17240 3898002 .. 3898015 +  -5.3  -3.28446   TGTGTGGAGGTTATT               GCTTA TGAA TAAGC                CTGTTTTTTTGTGTG  55 14
ISU54_RS17245 NONE
ISU54_RS17250 NONE
ISU54_RS17255 3901001 .. 3901011 +    -4  -2.64274   CTAAAAGGCTAAACT                 TGAT GGG ATCA                 TAAGTTTCACAGAGT  45 177
ISU54_RS17260 3901945 .. 3901955 +    -4  -4.10672   TAGCCATTAGATTTA                 TATC GAC GATA                 TTTAATTTGCATTCA  61 236
ISU54_RS17265 3902961 .. 3902980 +  -3.5  -4.78981   CCTCACTCTGATGGG            TGGGGCT ATATCA ACCCCCA             TTTCTTTTGCTTGAT  70 137
ISU54_RS17270 NONE
        hutX 3905077 .. 3905090 +  -6.7  -3.48269   CAACAAGAGGAAACA               CCATG AGGC CATGG                TTGATATTTGGTGCA  63 57
ISU54_RS17280 3905766 .. 3905798 +  -7.9  -3.28745   ATATCAAACCATACC      TGATAATGCTTATCA CAC TGATAGTCGTTATCA      TTAAGTTGTTGGCCA  66 62
ISU54_RS17290 3908207 .. 3908235 + -10.3  -3.60419   GTCTGAAATCATTCA        TCCGGTAATCCAT TTT GTGGCTTGCCGGA        TTATCATTTGACAAT  82 58
ISU54_RS17295 NONE
ISU54_RS17300 NONE
ISU54_RS17305 NONE
ISU54_RS17310 3912385 .. 3912395 +    -4  -2.62184   ACCCGGTAAAATCAC                 GTTT CCA AAAC                 TCATGTCCAGGGCAA  43 450
ISU54_RS17325 3915898 .. 3915908 +  -4.6  -2.71364   GCTGAATATCCAGCA                 CGGT ATA GCCG                 TAATTGCGGGCATCC  45 156
ISU54_RS17435 NONE
ISU54_RS17440 3936185 .. 3936229 +  -4.9  -2.76171   TAAATGTTGGCGACA AATAAAAACTCCCCGTCAGTA TGA TGCTGACGGGGAGTGGGTAGA TACTATTCGCTGAGT  49 86
         acs 3940434 .. 3940457 +   -11  -2.64199   GACACCGTCGTAAAT          TGTGCCGCCT ATAT AGGCGGCAAA           CTTAATTGATGCCTC  76 28
ISU54_RS17455 NONE
        actP 3942471 .. 3942484 +  -9.5  -2.56596   ATTTACAGGTTAAAA               GGCCC CTAG GGGCC                TAGATTGCTGACAAA  68 45
ISU54_RS17470 NONE
ISU54_RS17475 3945566 .. 3945578 +  -4.8  -2.79589   CTTTTTGGTATGCCA                CAGG GCTCG CCTG                TACTGTTGCTGTAGT  49 220
        purH 3955100 .. 3955111 +    -3  -2.86033   TGCCCCTTCACGGAG                TCAT CCAG ATGA                 ATATTTTGATAATTG  43 77
        purD 3956414 .. 3956438 +  -5.7  -2.93549   TCACTGTCTTTAAAA          GGGTACAGT CTAGTGC GCTGTGCCC          TACTTATTGCGGATC  54 45
         rsd 3962632 .. 3962653 +  -9.5  -3.72152   AATGAGCAAGCAGAA           TAGCCTGCT CATA AGTAGGCTA            TTGTAGTTTTAATTC  78 90
        thiC NONE
        thiE NONE
ISU54_RS17570 NONE
        thiS NONE
ISU54_RS17580 NONE
        thiH 3968848 .. 3968869 + -11.6  -4.77165   TTCGTCTCTCAAAAA           CCCGCATC CCGAAA GATGCGGG            TTTTGTTGTGCCCAG 100 285
ISU54_RS17590 3969556 .. 3969580 +  -9.9  -4.51743   ATAGGCGCATATGAA          AAACCTCCGGC TAT GCCGGAGGATA          TTTATTTGGTAGTAG 100 103
ISU54_RS17670 3986935 .. 3986959 + -11.5  -4.39329   GTCTACACCAAAAAC          CAAGCTGCCTA TAA TATGCAGCTTG          TTTCTTATCTGGAGT 100 147
        coaA 3987982 .. 3987999 +  -9.9  -2.63723   GAAAATAATCTATAC             GGGAGAT AGTT ATCTCCC              ATTAATTAATCAGAC  71 33
        fadB NONE
        fadA 4004659 .. 4004675 +  -5.7  -4.97402   AGTTGCTATTTCCCC              GCCGGTC AGA GGCGGGC              TTTTTATCGCTTTTA  82 156
        rfaH 4007730 .. 4007760 + -14.9  -2.66787   TCATTATAGAATTCA       TTCAGATAGGCGC AGTTA GTGCCTATCTGAA       TGCTGTGACTCTTAG 100 79
ISU54_RS17850 4024403 .. 4024416 +  -5.3  -3.38812   TACACAGAGTAAAAC               GGTTT AATT AAACC                TGTTCTTCACGCAGA  55 73
        metR 4027921 .. 4027937 +  -3.6  -3.27259   CCAGACGAGTATTCC              CCACTG TAATC CCGTGG              TTGGTAGTCTCTGTG  49 201
ISU54_RS17900 4036198 .. 4036226 +  -8.3  -3.07088   TGTTAATTTAATGAA       TACAGCCATGGA ATTATC TCC-TGGCTGTA        TATATCTGTCATACT  67 63
ISU54_RS17905 NONE
ISU54_RS17910 NONE
ISU54_RS17915 NONE
ISU54_RS17920 4040653 .. 4040663 +  -2.6  -2.82082   CATTGGTATTCGAAG                 TTAA TAG TTAA                 TAGTTAATCGTTAAT  42 15
ISU54_RS17925 4042317 .. 4042327 +  -2.6  -3.67417   GATTATCTCCATTTT                 TATT AGT AATA                 TTTAGCATTAAGTCT  50 502
        panM 4048620 .. 4048638 +   -16   -4.8048   CAAAAAAATAAATAT             CCTCCGGC ATA GCCGGAGG             TTTTTCATATGCGCC 100 172
        rsmD NONE
ISU54_RS17995 4055389 .. 4055408 +  -2.8  -3.78321   GCTCTTTATTTCATT            GCCTCCAGA GAG TCCG-AGGC            TGTTCTTTATTTCTA  52 353
ISU54_RS18010 4057237 .. 4057256 +  -5.7  -2.52519   AACATCATGACTAAG            TTGCTCC ACGGAC GGAGCGA             GTCTTCATGTCCTCA  52 147
ISU54_RS18015 4060391 .. 4060405 +  -7.2  -3.33885   AAATAGCTTAACCAA               GGTAAA GAA TTTACC               TTAATCGTTTGCGTT  64 521
ISU54_RS18025 4061187 .. 4061206 +  -2.8   -4.1721   GGTCAGCCAGTGCTG            GCAACTGA ACGA TAGGTTGC             TTTTCGCGTCTGAAT  57 11
        dcrB 4061869 .. 4061893 + -13.6  -4.72631   AATAATCTGTCCCAG          CAGAGCGCGG TTCAC TCGCGCTCTG          TTTTATTGACTTACT 100 36
        glpQ 4068059 .. 4068078 +  -4.4  -5.41143   ATTATTCAACGTGAC            TCACTA-CA TTC TGATAGTGA            TTTTTTTCACCCATG  81 113
        rhtB 4072217 .. 4072232 +  -4.6  -3.06133   GTCAGGCTAGCCAAC              CGGGTT AAAT ACCCCG               TTGGCTAACCCGTTA  50 48
ISU54_RS18090 4076458 .. 4076470 +  -5.5  -2.70932   GGTTGGCTAATTTAA                CCTAC TGC GTGGG                TGATTCGCCACGCAA  49 31
        rarD 4077444 .. 4077488 + -11.7   -5.5604   AGATGCCGAAAAAAA GCCCGGTTACTCAATATTGGG GTTAG TCCAAT-T-GAGTGACCGGGC TTTTTTATTCGTTGC 100 40
ISU54_RS18115 4082479 .. 4082502 +    -3   -3.4072   CACTTAATCCCCTCT          CCGG-GGAAGG CAA CCTGCAACCGG          TTGTGCTCACCACTG  47 191
        cyaY 4088997 .. 4089013 +  -6.6  -3.76402   TGCAAATCAGCATAT              CAATGC AACTG GCATTG              TTTGGTCGGTAAGCT  67 270
ISU54_RS18160 4091914 .. 4091940 +  -2.3   -5.4477   GTCATGCATCCATTA         CAATCGTTGTA TTCAT TGCAACAGTTG         TTTTTTTAGGCATTT  78 118
        hemC NONE
        hemD NONE
        hemX NONE
        hemY 4096201 .. 4096219 +   -16   -4.8048   ACCCAAAATAAATAT             CCTCCGGC ATA GCCGGAGG             TTTTTCATATGCGCC 100 119
        rhlB 4117913 .. 4117937 +  -4.1  -3.07043   ACGAATTCTTGCGTA          CTGCAACCGAG ATC CTCGGCTGCCC          TATTCAAGTCATCAG  49 327
ISU54_RS18300 NONE
ISU54_RS18305 4121786 .. 4121825 + -13.1  -4.00038   TGTACCGCAGCTAAT  CCTGAAATACGCCACGCT ATAAA AG-GTGGCGTATTTCATG  TTTATACTCGTCATA 100 27
ISU54_RS18310 NONE
ISU54_RS18315 4124566 .. 4124577 +  -4.4  -2.80016   TATATCGAAAAATAA                TACC CAAG GGTA                 TGATTGGTAATGAAA  46 472
ISU54_RS18320 4125471 .. 4125499 +  -9.6  -2.52676   GTAATAAATGTATTT        ATTACCGGGTGG TATAC CCACTCGGTAAA        TGACTTCAGAAGGTA  68 37
ISU54_RS18325 4126263 .. 4126276 +  -2.4  -3.57406   TATTTAGCAGTAACT               TTCC GGTAAA GGAA                TATTTATGGTGCAGG  49 34
ISU54_RS18330 4128965 .. 4128983 +  -6.7  -3.06696   ATATCTTCCGGCATT             TCGCAGT CTACC ACTGCGG             TCTATTGCCGCCGCC  58 81
        stbD NONE
ISU54_RS18340 4131084 .. 4131099 +  -3.2  -3.53444   TTGAAATAAAGTGCG              CTGCTG GGAA TGGCAG               TTTGGGGGCGAGTAG  49 32
        ilvY 4137391 .. 4137405 +    -5  -3.32993   ATTGATGCATTTTGG               GGATTG TTA TAATCC               TTGGTGTCTCAATAG  53 14
ISU54_RS18385 NONE
ISU54_RS18390 NONE
ISU54_RS18395 NONE
ISU54_RS18400 4140212 .. 4140227 +  -4.7  -2.63149   TCGTTAAAATGAAAC              GCGAA TAAAAT TTCGC               CTCTTATGTAGTTTA  48 18
ISU54_RS18405 4140921 .. 4140931 +  -4.6  -3.78953   AAAGAACTTAAACGC                 CGGG TTA TCCG                 TTTCATCGTGGCAAT  56 183
ISU54_RS18440 4150011 .. 4150025 +   -10  -3.45087   TCGCCACGGCAAACA               GCAACG AAC CGTTGC               TCTTCTTCCGTTACT  72 436
        hdfR NONE
        trmA 4166893 .. 4166911 +   -11  -3.33696   CGCAGATAAAAGAAA             GGGCAACG ACA TGTTGCCC             TTAGTTGGCAAGACG  81 55
        sthA 4169764 .. 4169775 +  -5.8   -3.5394   GGGGCGATACACCAA                CGCA ATGG TGCG                 TTTAGGGACAGGTTT  59 119
ISU54_RS18540 4171502 .. 4171519 + -11.3  -6.10295   AATAGGAAGTAACTT             GGTAGGC TCCG GCCTACC              TTTTTTTTCTGTTAG 100 79
ISU54_RS18545 4173025 .. 4173041 + -10.8   -4.7254   CTCAGGCGGTTCAAA              CCGGGC ACGGC GCCCGG              TTTTTAATCCCCCGT 100 44
        argE 4186336 .. 4186361 +  -4.8  -4.41494   TATGGAATTGAACGT        GGC-GAG-TGGA ATTG TCCATCTCTGCC         TTTTAGTTGAAACTA  68 163
         ppc 4189471 .. 4189499 +   -11   -4.1899   CGGGCTGACGAGCCA       GCGCGAT-GGGCA TCCC TGCCCAAGCGCGC        TTTTCGCTGGCGTCC  93 288
ISU54_RS18600 4191343 .. 4191354 +  -2.2  -3.39895   TCAGTGCACTTATGG                CC-CC ATT GGCGG                TTGGTTCATCGGAGG  45 64
        metJ 4196965 .. 4196977 +  -4.1  -4.26344   ATACACAAAAGCACG                CTAAG CGC CTTGG                TTTTGATAAAAATGT  63 91
ISU54_RS18625 4197830 .. 4197858 +  -7.5  -5.63517   TTTCACTACAAAAAA        TGGTTCAGCATAA CAA TTGTGCTTAGCCA        TTTTTTCTTTACGCA 100 152
        priA 4200986 .. 4201033 +  -5.6  -4.85918   TGATTCAGGTGAGGG GATATGGCGAACCCCTTG CAGCGTCAAGAA AAAGGGGTTCGCCCGATC TTTTATTGTCTGATC  78 109
        cytR NONE
        ftsN 4203230 .. 4203265 +  -2.5  -2.77182   TTTATAATTTCAATA    TACTCCGTACTGTTT TTTAAC AGGCAGTACGGGGAC     TCATTCAGTCTGCAA  42 61
        hslV 4203845 .. 4203855 +    -4  -2.73364   GCACTGCATAATTAA                 TGTA CAG TACA                 TAATTAACGTACAGA  45 52
        hslU 4205268 .. 4205298 + -15.4   -4.9934   TCCAGTATGGAGTAT       CCCGAGTGGGAGGC ATC GCCTCCCACTCTTG       TTTTTATCGTATTAT 100 73
ISU54_RS18660 4206359 .. 4206369 +  -3.2  -3.17486   CTGTTTGCTGTGGGC                 CTGG TAT TCAG                 TTAATACGGCTTGTT  46 11
        rraA 4207046 .. 4207065 +  -8.6  -2.64243   ATTAGTGCACAGATA            GGAGAAGG TTCC CCTTCTTC             TCCTATCCACTGTGA  63 71
ISU54_RS18680 NONE
ISU54_RS18685 4212399 .. 4212428 + -13.7  -3.28712   ATCGGCGCACCCACA       GAAAAGGGCGATA CTGA TATCGCCCTTTAC        TTGTGCCCAGAAAAC 100 242
        tssG NONE
        tagH NONE
        tssJ NONE
        tssK NONE
ISU54_RS18730 NONE
        tssH NONE
ISU54_RS18740 NONE
        tagO 4225730 .. 4225740 +  -6.8  -2.93723   CAGCGTTGAAACCGC                 TGCG TAA CGCA                 TGTCATTGGTGAGGC  58 3
        tssA 4227233 .. 4227255 + -12.8  -3.23711   TTCCTCGCCTTAAAG           CGTCAATACC GGT GGTATTGGCG           TTGATGGCTTGTGCG  95 112
ISU54_RS18760 NONE
ISU54_RS18765 NONE
ISU54_RS18770 NONE
ISU54_RS18775 4235011 .. 4235027 +  -5.8  -2.60496   CAGCTTTGCGCCGTG             GGCCAGG GAGG CC-GGCC              ATGTTTGAAGCGGCC  52 1
ISU54_RS18780 4237880 .. 4237902 +    -4  -2.64099   TTATGACGCGATGGG           GCGGCGGTTG TAG CAATCGGCGG           GTTCTGATGCGCCGA  45 13
ISU54_RS18785 NONE
ISU54_RS18790 4239795 .. 4239817 +  -9.2  -3.19175   CATGTAAGCGTATGG           GGAGGATC ATTGTTG GATCCTCC           TTGAATATATTACAA  72 43
ISU54_RS18815 NONE
ISU54_RS18820 4243820 .. 4243832 +  -3.4  -3.95073   CGGATAGAGCCACGG                CATC AGGAG GATG                TTTATGACTGTCGCA  56 54
ISU54_RS18825 NONE
ISU54_RS18830 4249182 .. 4249216 + -14.4  -5.14563   AACTGCCATAAATAA     AAACCGGGAAGATCCT AAG AAGATCTTCCCGGTTG     TTTTTTGATCGCCAG 100 30
ISU54_RS18850 4252737 .. 4252766 +  -8.7  -3.17146   ATGAGAGATGAGCAG       CATACGGCCTCC CGTTGTA GGAG-CCGTATG       TGTGTTATCAACAGA  69 76
        ssuE NONE
ISU54_RS18875 NONE
        ssuD NONE
        ssuC NONE
        ssuB 4260586 .. 4260612 + -10.1  -3.74872   CATCCATGTAGGCTC        GAG-CCGCGCCA TCCT TGGCGCGGACGC         TTTACTCCCCTGCCT  84 479
ISU54_RS18905 4262915 .. 4262951 +  -9.3  -3.45514   TAATAACAATTGGTT    GCAGGCATCGGGGGGGA TTA TCCTCCCCGATGTGAAC    TTAATGTTATATATC  76 177
ISU54_RS18910 4264773 .. 4264791 + -12.4  -3.61268   TTAATATCTTACGGA             CGGGGCTA ATT TGGCCCCG             TTTACCGATTACATG 100 37
ISU54_RS18925 4269132 .. 4269157 +  -8.3  -3.34962   AGTTACCCGTAAACA         GGCAGTGGG AAAATAAC CCCACTGTC          TTCTCCACTATCACC  69 136
ISU54_RS18930 NONE
ISU54_RS18935 NONE
ISU54_RS18940 NONE
ISU54_RS18945 NONE
ISU54_RS18950 4274950 .. 4274975 +  -7.5  -5.72616   CGCGTGAAAGAGAAA         CACCGCAACGGT ATG GCCGC-GCGGTG         TTTTTTTATGTCAGT 100 59
ISU54_RS18960 4277581 .. 4277626 +  -6.8  -5.12707   ATCTTTCCTGACAAG CCCGGGTATGAACTGTCC AACTTTATGG GGCCAGTCCATGCGCGGG TTTTTTACGCTTTAA  88 49
ISU54_RS18970 4279780 .. 4279804 +  -9.9  -4.47456   ATAGGCGCATATGAA          AAACCTCCGGC TAT GCCGGAGGATA          TTTATTATTCGGTAT 100 103
ISU54_RS18990 NONE
ISU54_RS18995 4283926 .. 4283936 +  -5.4  -3.33671   TCAGACGTTATGTAT                 CAGA CAC TCTG                 TTGTGGCGTGAGTGT  55 139
ISU54_RS19000 NONE
ISU54_RS19005 4285884 .. 4285911 +    -7  -3.30007   CTAAAGAGGTCGATT        TTACCTCGTCAG CGGG CTAACGGGGTGA         TTATCACCGGGTCTT  61 6
ISU54_RS19010 4286678 .. 4286701 +  -2.4  -2.91383   AGACATAGGCAATCC          TTTTGCCGAT ACCT AACGGGAAAA           TCTATCCATAGCGGT  42 48
ISU54_RS19015 4287238 .. 4287248 +  -3.2   -4.0098   ACTGTAAAATACAGA                 GAGT CTG GCTC                 TTATTTAACTTAACG  56 66
ISU54_RS19055 4293671 .. 4293701 + -11.2  -4.75776   TAATTAGCCATCAAG       GCCTGAATTCCGCA CTC TACAGAATTCAGGC       TTTTTAACTTCAGTT 100 115
        csrD 4301975 .. 4301991 +  -2.9  -4.57569   TGACTGGAACGTGAT              GTGACTG ACG CAGCTAC              TTTTTCACCGAGTCA  61 238
        mreB 4303224 .. 4303237 +  -3.1  -2.71144   GCGAATCCCGATGCG               CTGAT CCAG GTCAG                TGATTCGGGCGAATG  42 107
        mreC NONE
        mreD NONE
         maf NONE
         rng 4306938 .. 4306954 +  -2.9  -2.64616   AAGACGGTTCCGCTG              TGGCCCT TGC AGCGTCA              TGGTCTCACTGCGGA  41 71
        yhdP NONE
ISU54_RS19125 NONE
        tldD 4313391 .. 4313419 + -19.1  -3.67976   TATTACGGGTATAGA        CACCTTCCCTATT CAA AATAGGGAAGGTG        TTTAAAATTAATAAA 100 184
ISU54_RS19185 NONE
        aaeA NONE
        aaeB 4337061 .. 4337075 +  -5.6  -4.65458   TCGAGCCCTCATAAA               GGCGCT CAC GGCGTC               TTTGTTATTTCTCTC  75 168
ISU54_RS19205 NONE
ISU54_RS19210 4339677 .. 4339724 + -10.5  -5.75342   GATTACGCCCGCCAA CAGTATTGAGTCGGGAGCCGGG AGTGA CCCGGC-CCCGCCCGATTACTG TTTTTTTTCAGCCAG 100 95
        pmbA 4341819 .. 4341843 + -15.8  -4.08164   CTTACTGTTCCACAA          CTCGCGGGTA GAAAA TACCCGCGAG          TTTGTATGCGCTTTT 100 56
ISU54_RS19225 NONE
        cybC 4343400 .. 4343432 + -15.7  -3.83921   TATAAAAGTGAGCGA      TAGAGGGTAATGGCC TGC GGCGGTTACCCTCTA      TTATCTTCTATTACC 100 150
        mlaF 4361752 .. 4361764 +  -6.3  -3.02043   AAGCGAACGACAAAT                TGGTT ATA AACCA                TGTTGAACGGCGCTT  56 62
        mlaE NONE
        mlaD NONE
        mlaC NONE
        mlaB 4364290 .. 4364318 +  -6.1  -5.04868   AGGTAAGATAATCAA       GCTCCTGTGCAT AATGGC AT-CACAGGGGC        TTTTCTTTAGTTTCA  84 64
        ibaG 4364645 .. 4364655 +  -3.2  -3.08798   ATCGCAAACTAAATG                 GCTT TTA AGGC                 TGTTGGCTAAACGCT  46 18
        murA 4366128 .. 4366152 +  -8.6  -5.59879   TTCGGTAAATAAAAA          TGCCAGCC GGTGATTGG GGCTGGCA          TTTTTTATGTTTATA 100 85
ISU54_RS19370 4368099 .. 4368123 +  -9.9  -4.55697   ATAGGCGCATATGAA          AAACCTCCGGC TAT GCCGGAGGATA          TTTATTTCTGCAAAT 100 103
ISU54_RS19385 4371592 .. 4371611 + -11.4  -2.76249   AATGCTATTCTATGG            CGGGCGAC ATTT GTCGTCCG             TACTTAACATGTTTA  81 80
        rplM NONE
        rpsI 4372723 .. 4372739 + -13.7  -5.64274   GATTGATGGTAAAAA              CCCGGTG TCT CACCGGG              TTTTTTTATGCCTGA 100 62
        sspA NONE
        sspB 4374261 .. 4374278 + -14.1  -3.69613   GGCTCTATCTCTTCA             GGGCGGC GTTA GCCGCCC              TTATCGTTTCTGTTT 100 64
ISU54_RS19430 4383102 .. 4383112 +    -4  -4.12198   AAATTATCTCCCCGC                 GATT TGC AATC                 TTTTCCACACTTCTG  61 195
        arcB 4385588 .. 4385623 +  -6.8  -3.35349   CAGGGAAAACGTTAA    CCTGCGTATTATTTCG ATTT CGAGTGAATTCGCAGG     TTGTCAGGATTCTTT  61 81
        elbB NONE
        mtgA 4387283 .. 4387328 +  -6.8  -4.11363   GGTATCGATGTGGTG GATAAAAAACGGGCTTGGCG GTTTAG CGCTAAGCCCGTGATAAATC TTATTTAATCTTCTT  71 159
        rsmI 4392186 .. 4392198 +  -3.3  -3.05816   AGTAATGTGCCTATA                ATCCG CCG CGGAG                TTGACTAGACAGTCG  44 36
        rnpB 4392586 .. 4392599 +  -9.5  -4.98531   CTCATTCCACAAAAT               CCCGC TTCG GCGGG                TTTTTGCTTTGGAGG 100 38
ISU54_RS19485 4394918 .. 4394943 +  -8.9   -3.6284   AACGTTCGCTTGCTA         CGCCCTTGGCC TTGG GGAAAAGGGCG          TTTAGCGTGCTAATT  75 85
        fabY 4398954 .. 4398973 +  -6.4  -3.72576   CTGGTACCCTTAAAA            TCACTGAC ATGA GCCAGTGA             TTTGCTGCCGGGCGA  63 45
        gltS 4403946 .. 4403972 + -10.1   -3.9749   CATCCATGTAGGCTC        GAG-CCGCGCCA TCCT TGGCGCGGACGC         TTTACTCTTCTGCCT  86 208
        ligB NONE
         rph 4414848 .. 4414864 +  -9.4  -5.41143   ATCATAAATTTATTA              GGCGAC GGATA GTCGCC              TTTTTTTACCCGCTA 100 34
        pyrE 4415680 .. 4415737 + -21.6  -3.68569   ATAACATGGGGTAAT C-CCGAATCAAGCTACGCCAAGAGGGC CGTTT GCCCTTTTTGCGTAGCTTGATTCGCTG TTCTCTCTATGTCTT 100 52
        radC 4419035 .. 4419049 +  -6.4  -3.76373   AGAGCAATATTTATT               GATCCT TTC GGGATC               TTTAGCTGTTCGGGA  65 39
        rpmB NONE
        rpmG 4419720 .. 4419735 + -11.8  -5.60689   GCGGACTAAGAAAAA              CCCGGC CTTG GCCGGG               TTTTTTATTATATAA 100 46
        mutM 4420663 .. 4420674 +  -5.8  -3.97674   CGTGATATCCCCACC                GTGG CGCG CCAC                 TTCTTTCACTAATGA  66 97
ISU54_RS19645 NONE
         tdh 4429050 .. 4429090 + -11.3   -3.3506   TAGTTTATCCCCTTC  GGGCTTGGTGTTGCA AAACTACCCGC TGCGATACCAAGCCC  TTGTCAGGATTTACG  86 38
ISU54_RS19670 4433916 .. 4433938 +  -5.7  -4.04576   CTTGTGCGGCTATTA           TATCGATAT TCCGT ATATCGGTA           TTTAGTTGTATAAGT  66 50
        grxC 4434233 .. 4434253 + -10.4  -3.68827   ACGCCCTGGATGCGC            GCGGTGGG CTAGA CCCACTGC            TTTAACTCGTCAGTG  82 0
        secB NONE
        gpsA 4436059 .. 4436081 +  -4.8  -3.32695   GAATAAGGGCATAGC           CGCTTCGG TCGTTCC CCGGAGTG           ATTTGTTTATGGGCA  53 243
        cysE NONE
         ada 4438980 .. 4438993 +  -9.5  -3.32498   CCTGTTCCTCCCGAC               GCCCG ATCT CGGGC                TTCATCTGTACGATA  70 213
        cpxP 4441631 .. 4441649 + -14.6  -5.71638   CCATCCCTGTCTTTC             GCCCTCCA TGA TGGAGGGC             TTTTTTTGCTTATTG 100 82
ISU54_RS19725 NONE
        fieF 4444736 .. 4444777 +  -2.3  -2.86177   GCAGTGAAAAATACC GCAAAATGGCTGACTTGAA TCAA TTCAGCTTGGCGTTTTTGC  TATAATATCCGATAT  41 86
        pfkA 4445901 .. 4445953 +  -9.5  -5.00138   TCGCTCATTCATCAA GCCCTCGAAAT-TGAACTGATCCCAA AAAG TTGGG--CAGTTTACATTACGAGGGC TTTTTACTTTCGGTC 100 50
ISU54_RS19740 4447214 .. 4447251 +  -8.5  -3.91897   TACCAACCGCTTTAT   CG-CCAACACCACATCGT TGT ATGTTGTGGTGTTGAACG   TTTATCGCTACCGCG  77 153
ISU54_RS19765 4452715 .. 4452736 +  -5.8   -5.1523   TTGGATATATAAAAA           CCGGCG CTTTTATTTA CGCCGG            TTTTTGTGTTGTACC  85 198
ISU54_RS19780 4455249 .. 4455275 +  -6.5  -3.63968   ATACTGCTCGCTGGT         CATATGCCCCG GTTTA CGGCGCAGATG         TTTACGCATTTCGCG  63 387
        zapB 4460900 .. 4460918 +   -16   -4.8048   GAAATAAATAAATAT             CCTCCGGC ATA GCCGGAGG             TTTTTCATATGCGCC 100 134
ISU54_RS19815 NONE
ISU54_RS19820 4463679 .. 4463695 +    -3  -2.66899   CCCAGGTTGCGCCAT              GGTTAT TTCCC ATGACC              GTTGGTTCCTTGACC  42 409
ISU54_RS19850 4470215 .. 4470226 +  -7.2  -3.29511   GGGAGAAGCTTGAGA                CGCG ATTA CGCG                 TTATCACCCAGTAAC  64 132
        rsmC 4484513 .. 4484536 +  -3.1  -3.14344   ATCACAAAAGTCATG          TTCCGGTAC GCGATG GTGGCGGAA           TTGGTAGACGCGCTA  46 273
ISU54_RS19920 NONE
ISU54_RS19930 4486955 .. 4486965 +  -2.4  -3.70773   ATTGGTCAATCTAGA                 GGAC GGC GGCC                 TTATTGGGTATAGGC  49 449
ISU54_RS19940 4488983 .. 4488996 +  -6.7  -2.92425   TATATCTGTCCCTAC               TAGCC AAGA GGCTA                TGTCTCGACTTGATT  58 195
ISU54_RS19945 4489323 .. 4489336 +  -3.1  -3.84825   TGCGGAGATCGTAAA               G-CAGC AAC GCTGGC               TTTGGTATGCCTGGG  53 56
ISU54_RS19985 4500739 .. 4500751 +  -3.5  -3.09664   ATCTTTTTTGAACAC                TTTTA AAT TAAAA                ATATTTTTGTTCACT  48 74
        lsrA NONE
        lsrC NONE
        lsrD NONE
        lsrB NONE
        lsrF NONE
        lsrG 4506945 .. 4506974 +  -3.6  -3.86903   AAGATGCATCGCCCA       GGGGCTGATA ATCATGCTTC TATCGGCCTC        TCTTTTAATTCTCTG  56 170
ISU54_RS20020 4507608 .. 4507634 +  -8.6  -2.75074   TCCGATAAGGGTCAC         TGGGTGCCACCT CAG ACGCGGCACCCG         TCATGTTGAAATGAA  64 41
ISU54_RS20030 4511877 .. 4511898 + -13.1  -3.15544   TGCTAGCCCGCAGGG           TGAGCCTCA AGGA TGAGGCTCA            TTAGTCCCGATGAGC  95 243
ISU54_RS20035 NONE
ISU54_RS20040 4513183 .. 4513201 +  -2.4  -4.06055   TGAACAGTGGTTTGC             TCTCGTTG CAT TAACGACA             TTTCGTTTAAAGCCT  55 451
ISU54_RS20055 NONE
ISU54_RS20060 NONE
ISU54_RS20075 4520356 .. 4520366 +  -6.8  -4.12188   CCGCCGGAAAACAGG                 CGAG ATT CTCG                 TTTTCAGAGTAGTAA  71 135
ISU54_RS20080 4520865 .. 4520878 +  -2.4  -2.54523   GTTCAAACTAATTTA               TCGA ATTTGA TCGA                TACATTGAAATATAA  39 155
ISU54_RS20115 NONE
ISU54_RS20120 4531333 .. 4531349 +  -9.3  -3.05463   CCTTCGACCACGACA              CTGGCGC TAA GCGCCCG              TTGAATCAACGCAAT  65 502
        glnA 4537162 .. 4537179 + -11.3  -5.28826   CCGTGGAAACTTTTG             GCCCATC TTAG GATGGGC              TTTTTTCTCCACTTT 100 126
        glnL NONE
        glnG 4539798 .. 4539831 + -11.8  -2.80994   GTTCCCGCCAGATGG     TCACCCTCAAGAGCG ATAAC CGCACT-GAGGGTGA     TATCGTCAGATTACA  83 40
ISU54_RS20170 4543507 .. 4543525 +   -16   -4.8048   CCCATAAATAAATAT             CCTCCGGC ATA GCCGGAGG             TTTTTCATATGCGCC 100 178
        mobA NONE
        mobB 4552183 .. 4552194 +  -3.6  -4.02022   CACCATTTTCAAACC                GCTG GTGA CGGC                 TTTATAGTCCTTCCA  59 467
ISU54_RS20240 NONE
        mdtD 4561414 .. 4561424 +  -5.4  -3.08798   TAACGAAGGGAGACC                 GAAC CGC GTTC                 TATTAGCTCGGGAGT  53 38
        ravA NONE
        viaA 4568622 .. 4568638 +  -2.2  -3.18681   ATAGTTTGTGGCATT              TCACCG CGCAA CAGTGA              TTGATGCCATTCCAG  44 260
        asnC 4570141 .. 4570153 +  -3.3  -2.71364   CCCACATTATCCACA                GCTAG ATC CCAGC                TGATTCACAGAGTAC  42 57
        mioC 4570892 .. 4570911 +  -5.1  -4.32402   GAGATCTAATAAAGA            GATCTTT AAATAA AAAGATC             TTCTTTTAATTAAAG  68 275
        mnmG 4573029 .. 4573054 +  -2.5   -4.1891   ATTTATATGCTGACT         GGGCGTTTTCT GGTC AGAGGATACCC          TTTGTGTTAAAAAAA  57 142
        rsmG 4574050 .. 4574068 +  -3.2  -3.85156   TAAAGACAAAGCAAG             GCTTTATA GGT TATAAATC             GTTTTGTTTTTATTT  53 397
        atpI NONE
        atpB NONE
        atpE NONE
        atpF NONE
        atpH NONE
        atpA 4578525 .. 4578555 + -12.7  -2.82516   CCTGGTAACGCTATG      CGGTCCTGCTTTTC GTTA GGAAAGCAGG-CCG       TCTGGTAATGAGGAG  89 33
        atpG 4579417 .. 4579437 +  -3.2  -3.56366   AGGAACTCACCGAGA           TCGTCGGGG GAGC CTCCG-CGG            TTTAACCAGGTTATT  49 0
        atpD NONE
        atpC 4581548 .. 4581573 + -14.1  -5.22794   TAAGTAACGATAGAA         TGCCAGTCGGT GAAA ACTGACTGGCA          TTTTTTAATACTTAT 100 149
        glmU 4583433 .. 4583443 +    -4  -3.65135   TTATTAAAAGCACCC                 TTCA AGG TGAA                 TTATGCTTCTTTGAA  54 43
        glmS 4585493 .. 4585510 +  -9.1  -5.61913   AGCGTATTAACGAAA             GCCGGCA AATT TGTCGGC              TTTTTTGTCTTTATT 100 73
        pstS NONE
        pstC NONE
        pstA 4589086 .. 4589097 +  -7.2  -3.08679   ATAAATTCCAAAATG                CCGC TTCG GCGG                 TATTGGCTAAAAGAG  62 69
        pstB 4589889 .. 4589903 +  -2.1  -2.83371   ATTATATCACTGGTC               GCTAT GGTTG ATGGC               CTTATTACTGGGCTA  41 15
        phoU 4590719 .. 4590743 +  -7.8    -5.626   AAATAATATTTAACC          CCGGTCAGCC TACTC GTTTGACCGG          TTTTTTTATCCACTC 100 35
ISU54_RS20390 4591878 .. 4591888 +  -3.2  -4.13767   AACGCAATATCTCAT                 CTCT TTA GGAG                 TTTTCCCATGAAACA  58 227
ISU54_RS20395 4592763 .. 4592809 +  -6.7  -3.71873   TAACTTATCCCCTTC GTTTTTGGCGTTGCAGG-GG TTGATTGC CTACCTGCAATGCCAATGAC TTTGGCTATCAGTAC  65 38
ISU54_RS20400 NONE
ISU54_RS20405 4594836 .. 4594848 +  -3.3  -3.53563   CGGGTAACACGATTT                GCTCT AAC AGCGC                TTTCACACCGGCTAT  49 434
ISU54_RS20420 4597256 .. 4597267 +  -4.4  -2.95942   TCCTGAAGTTCATAA                TAGC TGAT GCTA                 TGCTTTCAGTATCAA  47 330
ISU54_RS20425 4598102 .. 4598118 +  -3.8  -3.98204   TTTTGTATTATTTTT              TTCTAT CGGAT ATAGAA              TTTCTGAATGTATTT  58 11
ISU54_RS20430 4598480 .. 4598490 +    -4   -3.7614   TTAATATATTAGCAT                 CAAT AAT ATTG                 TTGTTAATAATAATT  57 46
ISU54_RS20435 4598878 .. 4598904 + -15.2  -3.62597   TAAGAAGATGATCAA         CCTGCTGCGTGA TAG TGACGCAGCAGG         TTATTGAGCAATAAA 100 59
        rpmH NONE
        rnpA NONE
        yidD NONE
        yidC 4601770 .. 4601794 - -15.1  -4.40561   CTTCTGTAAAAAGAA          TAAGGCGGTCA TAT TGACCGCCCTA          AATACTCATGATTAT 100 50
        mnmE NONE
ISU54_RS20440 4598878 .. 4598904 - -15.2  -3.30452   TAAGAAGATGATCAA         CCTGCTGCGTGA TAG TGACGCAGCAGG         TTATTGAGCAATAAA 100 48
ISU54_RS20415 4595140 .. 4595152 -  -2.7  -2.62371   ATTCACGCAACTAAT                CCTTT AAA AAAGA                TAGACATCAGTTAAT  41 78
        yieH 4594369 .. 4594391 -  -4.8  -4.35327   CCATTAAAAACCAAA           GCTCCATG GCACGTT CATGGCGC           TGGTGGTGTAACAAG  66 96
ISU54_RS20285 4568430 .. 4568458 -  -9.5  -4.84529   TGATAAAGTTAAAAA        CCCGCGATGACTG ATA CCGTTATCGCGAG        TTAGCATAGGGGGAT 100 53
         kup 4563194 .. 4563217 - -15.4  -3.57731   TGAATGATGATAGAA          GAGGCCGTTA TGAT TAACGGCCTC           TCAATTAAATTTCCA 100 30
        rbsD NONE
        rbsK NONE
ISU54_RS20255 NONE
ISU54_RS20250 4561327 .. 4561338 -  -2.2  -3.64703   TTCTTGTTACTCAAA                CCCA GGGA TGGA                 GACAATTTAATTCAG  47 85
ISU54_RS20235 4556980 .. 4556990 -  -3.2  -2.86202   GGGACACGAAAATAC                 CGAT CAA ACCG                 AAATTCAACCGTTTC  43 141
ISU54_RS20230 4556805 .. 4556842 -  -7.9  -3.45839   ATTGTTAAAGAGCAA   TATCGTAAACACGACTT GGTA AAGTCATCTTTACGTTA    TTTTTCAGTTCATAA  68 77
ISU54_RS20225 4553720 .. 4553730 -  -6.8  -4.27316   TCTCTCAATTCAAAA                 CACC TTC GGTG                 TTGTAAGGTTAAGCC  74 30
         rrf 4553472 .. 4553492 - -10.4   -4.8048   CGCGCACAGCAAAAA            CCCCACGC TTTGG GCATGGGG            TCTTGGCTTTATTTG 100 43
ISU54_RS20215 4551410 .. 4551424 -   -10  -3.87815   CTGGAGCGCTACAAA               CACTGG TCG CCAGTG               ATTGCCGTTGGGCAC  78 400
ISU54_RS20200 4550102 .. 4550116 -  -7.2  -3.17218   AAAATTAAAAGCAGA               GTTGTT CAT AACAAC               ATTTAGTCTATATAA  62 110
ISU54_RS20195 NONE
        dsbA 4548440 .. 4548456 -  -6.5  -6.32017   AATAAATAAAAAAAA              GGGGC AACAAAA GCCCC              CTCTTTATGTACTAA 100 42
        polA 4544924 .. 4544950 - -18.1  -5.24129   TCTGGGCACAAAAAA         CGCCCCAGTCA ATAAA TGACTGGGGCG         GCTAATATACAGCCA 100 258
ISU54_RS20180 4544216 .. 4544236 - -12.5  -3.75817   TGGGCACAATAAATA            TCCTCCGGC ATA GCCGGAGGT            TTTTCATATGCGCCT 100 105
ISU54_RS20175 4543500 .. 4543532 - -11.3  -3.92143   CAAAATCCCCATAAA      TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA      TATGCGCCTATAAGG 100 99
        yihI NONE
        hemN 4539390 .. 4539401 -  -4.4  -4.98531   CGTGGAAAGCAAAAA                TCTG CATC CAGA                 GACCGAAGCGGCGCT  76 461
        typA 4533221 .. 4533245 - -14.3  -3.75738   TAGGAGGAGTAAGAA          CTCAGGGCGCC TTG AGCGCCCTAAG          TATCAACAATGCAAA 100 47
        yihX 4532309 .. 4532333 -  -7.2  -3.31144   GGGCCAGCGTGATAA          GGGTTAGC ACGACTAAG GCTAACCC          ATTAATGATTAGAGC  64 47
ISU54_RS20130 NONE
         dtd 4530543 .. 4530558 -  -4.6  -4.37092   AGGGCCGTTATAAAA              CGACGC TTCA GCGTGG               AGTAATGGCCCCCCG  66 397
ISU54_RS20110 NONE
ISU54_RS20105 4525317 .. 4525332 -  -6.8  -5.81412   TTTAGGCAAAAAAAA              GCCACC TTGC GGTGAC               TTAATTTTCATACTA 100 238
ISU54_RS20095 4523171 .. 4523188 -  -2.1  -5.00616   CTCCCTCTCAAAAAA             TTAAATA ACGT TATTCAA              AATAGCATTACTTCC  68 33
ISU54_RS20090 NONE
ISU54_RS20085 4520839 .. 4520853 -  -2.8  -3.72236   TCTATAAAAAAGAGA               CAACCT AAG AGGTTC               AAACTAATTTATCGA  50 251
ISU54_RS20070 NONE
ISU54_RS20065 4517025 .. 4517044 -  -7.1   -3.5882   CAGAGGAGGCCGAAA            CTCGGGC TGGTAT ACCCGAG             TGGCTGAGTTCCCAT  62 249
ISU54_RS20050 NONE
ISU54_RS20045 4512494 .. 4512505 -  -4.4   -4.0371   GAGCGGTTAGACAAA                CTGT GCTT ACAG                 CTTAAATGGCAACTA  61 270
        ptsP 4507198 .. 4507214 -  -2.9  -4.58395   TGGATTCGGTAAAAA              GCACCGC GGA GCAATAC              GGTAAATCAGCCGGT  64 465
        lsrK 4497562 .. 4497604 -  -9.1  -3.12999   CCAGCGCACAGTCAA CGGAGC-ATACACGCAGCACG TGA CG-GCGGCGAGCATTGCCCCG AAGCGCAAGCTGGCC  69 126
        rfaQ NONE
ISU54_RS19965 4494686 .. 4494706 -   -14  -3.67976   GCCATTAACGTTAAA            CGGCACCC ATAAA GGGTGCCG            CGGCTAAACAAAAAA 100 235
ISU54_RS19960 NONE
ISU54_RS19955 NONE
ISU54_RS19950 4489590 .. 4489613 -   -11  -5.75342   GTTCGTCAAAAAAAA          CAGCCCCG TGACTGAC CGGGGCTG           CTGAAATTACTTTTA 100 65
ISU54_RS19935 4486734 .. 4486751 -  -3.5  -2.94237   AAAAAAAAGAAAATG             GCTTTTT TAAT AAAAAAC              TGACTCACGTATTTT  46 346
ISU54_RS19925 4484755 .. 4484771 -  -2.9  -2.62616   TCACGTTTTATATTA              TCCCCGA TGA TCGGATA              CCCCCATCATGACAC  41 32
ISU54_RS19910 NONE
        rimI 4482279 .. 4482303 -  -3.6  -5.43329   AAAAACAAAATAAAA         CGGCGCTATGCC ATT GGCA-A-CGCCA         TCATAATGGCATCTT  84 6
        prfC 4480377 .. 4480393 -  -2.9  -3.80466   ATCACAGAAGAAACA              CAGTCGG AAT CGGACTA              AAACAGGATTTTCAT  52 148
        osmY 4479436 .. 4479457 -    -8  -3.82946   CCAGTTTAAAGATAA           GGTGCCTG ATTAAA CAGACACC            CTTTCATTTGGCTCT  72 143
ISU54_RS19890 NONE
ISU54_RS19885 NONE
ISU54_RS19880 4476675 .. 4476690 -  -6.2  -3.83324   CTACAAAGATGTAAA              TGTGAT CATA ATCACA               TTAAAGTTCAACAAC  65 412
ISU54_RS19875 4475239 .. 4475263 -  -8.6  -2.62735   ATACGCCTGATAGCA          TGTGCCGTTT GACAA AAACGGCACC          TTATACATCACAGTG  63 33
        deoC 4473799 .. 4473831 -  -6.9  -3.34398   GCGCTTTCGGAAATA      GCGACACAGCAGGCC TTC AGCCTACTGTGCATC      AATTCAGTGTAATGA  61 52
        deoB 4470926 .. 4470940 -  -4.2  -3.17229   ATTTCAGCATTAATA               TGTGGC GTT GCCATA               ATCACTTTCCTTAAA  49 149
        deoD 4470151 .. 4470178 -   -15  -3.71527   AGAGGAATAAATCAA        TTCAGCGGCAGA GATC TCTACCGCTGAA         GAAAGAAAAAACCGC 100 67
        serB 4468188 .. 4468207 -  -5.7  -2.52208   AAATGATTTATCAAC            GAATGGC CTACTT GCCACTC             TCGTGCTTTAAGCTA  52 13
        radA 4466602 .. 4466615 -  -4.5  -4.74052   ACTAAACAAAAATAA               CACAG TATG CTGCG                GGATTGGCACTATTA  71 135
        nadR NONE
ISU54_RS19830 4463987 .. 4464004 - -12.7  -2.78197   CCTGACAGATAGAAG             GGCCTGC AATC GCAGGCC              TTTTTAGTCAGGGTA  89 29
        tnpA 4460893 .. 4460925 - -11.3  -4.44046   GTCAGCGGAAATAAA      TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA      TATGCGCCTATAAGG 100 99
ISU54_RS19800 4458999 .. 4459009 -  -5.4  -3.04517   AGGCGCGTTCAAAAC                 GGTT TAT AACC                 CATTTGTTGTGCGTT  52 92
        glpK 4457279 .. 4457301 - -11.3  -4.93365   TCTCACAACGAAAAA           CGCGCCATC GGGGG GATAGCGCG           TTGTGTTTGGTTTAA 100 100
        glpX 4456076 .. 4456105 -  -7.8  -3.68619   TCTAACTGATGTAAA       CTTTACGGCGCT TTTACG AGCGCCGTGCAG        AATAAAAATGATTGC  70 49
         fpr 4454833 .. 4454852 -  -7.2  -3.36968   GACGGAAGGTGATAA            CCGCTT-TG GCC CAGAAGCGG            TGCCAGTGAAATTTT  62 401
ISU54_RS19775 4453585 .. 4453599 -   -10  -3.03309   GGTCAATAATAATGA               CTGCCT GAC AGGCAG               TTTACCTGTCCAACA  73 96
        tpiA 4452715 .. 4452736 -  -6.5  -5.03994   TTGGATATATAAAAA           CCGGCGC TTTTATTT ACGCCGG            TTTTTGTGTTGTACC  84 63
ISU54_RS19760 NONE
ISU54_RS19755 NONE
ISU54_RS19750 4448150 .. 4448184 - -12.3  -2.63623   TGCGCCAAAAGACAG    GCCACCGAAAAC-AGG ATGA CCTTGTCTTCAGTGGC     TAAGCGACGTTTAAA  88 71
ISU54_RS19745 4446850 .. 4446862 -  -4.7   -3.8709   AAAGTGGTCGATAAA                CGCGG AAC CCGTG                ACGTTGCCGATGCTT  59 499
        cpxR NONE
        cpxA 4438802 .. 4438829 -  -5.6  -3.04461   CACTGATTCTCAATA        TCTGCCCGAACCA CAT TGAT-CTGGCAGA        TAGACGGCAGATTAA  54 37
        trmL 4437007 .. 4437023 -  -5.1  -2.62735   ATATGGGGCAGATTA              GCCAC TCTGATT GTGGC              TGACACGTTCTCTCT  49 53
        gpmM NONE
        envC NONE
        rfaD NONE
        rfaF NONE
        rfaC 4423528 .. 4423538 -  -5.4  -2.56715   ATGTTTATGAACTCA                 CTCT TTC AGAG                 ACAATAAAGCAGCGC  49 40
        waaA NONE
ISU54_RS19620 NONE
        coaD 4420549 .. 4420585 -  -4.4  -3.48657   TGAAATAGCGAAACA   CGGGCAGC-GCAGCA CGTTCTTT TGCCGCCACTGCCAG    CATTGAGAGGTTTAG  52 37
       coaBC NONE
         dut 4416432 .. 4416469 -  -6.9  -4.05495   TAACAAAAACCCAAA   CACCGGCCGCTCTGGGAA CAA TGCCCAG-GCGGCTTATG   TGATAGCTTTTTTAC  69 62
        slmA 4415690 .. 4415726 - -15.2  -3.35867   GTAATCCCGAATCAA    GCTACGCCAAGAGGGC CGTTT GCCCTTTTTGCGTAGC    TTGATTCGCTGTTCT 100 87
ISU54_RS19565 4413072 .. 4413097 - -12.6  -2.70932   TTTTCCTGCGAACCA         GCAAGCCCGC AGATTA GCGAGCTTGC          TGGTTTTTTGTGTTC  88 61
ISU54_RS19560 4411864 .. 4411890 -  -5.2  -2.76261   TTTCAACGGGCAAAG         CAGCAACC CTTTTCTCGTT GGTTGCTG         GCATTGGGGTTCCCG  48 242
         gmk 4409355 .. 4409370 -  -3.3  -2.78816   TGACTGGGCATGATA              CTGAA ACTCTG TTCAG               TCCGCCAATAATTTG  43 22
        rpoZ 4409023 .. 4409033 -  -5.4  -2.71593   ACAGGTACAAAGGCA                 GACT CGC AGTC                 TAATTAACGACGACC  49 29
        spoT NONE
        trmH NONE
        recG 4403929 .. 4403940 -    -3  -3.58329   TAAAGACGCCGTAAA                TACA TCCA TGTA                 GGCTCGAGCCGCGCC  51 214
ISU54_RS19525 4403852 .. 4403867 -    -9  -3.81146   GCTGGGAATTAAGAA              GCCTCA TGAA TGAGGC               TGAGGTTATTGACAA  78 3
ISU54_RS19515 4400875 .. 4400900 -  -6.9   -5.9873   GGACCATAAAAAAAA         TGGCCGG-CATC ATT AATGACCGACCA         TTTCAGTGATGTGTT 100 51
ISU54_RS19510 4398954 .. 4398973 -  -8.6  -4.11216   CTGGTACCCTTAAAA            TCACTGAC ATGA GCCAGTGA             TTTGCTGCCGGGCGA  79 121
ISU54_RS19500 NONE
ISU54_RS19495 4395770 .. 4395780 -  -4.6  -3.78775   GTGCGCATCAGTAAA                 GCAC GGT GCGC                 CCACGGACAGGCGAG  59 185
ISU54_RS19480 4392925 .. 4392938 -  -9.5  -3.23733   CTCATGCCACAAAAT               CCCGC TTTG GCGGG                TTTTTGTTTTACACG  72 86
ISU54_RS19465 NONE
ISU54_RS19460 4388803 .. 4388816 -  -3.9  -3.94471   ATTGGAAAATAAACA               TCAAT CCGT ATTGA                AAGCGTTGGGTAGCC  58 12
        diaA 4387921 .. 4387934 -  -3.1  -3.24289   ATGGCAAATATGTAA               CCAAC CTTC ATTGG                TGCTCCTTTAATCGT  47 33
        yraP 4387292 .. 4387319 - -12.7  -5.24129   GTGGTGGATAAAAAA        CGGGCTTGGCG GTTTAG CGCTAAGCCCG         TGATAAATCTTATTT 100 62
        gltB NONE
ISU54_RS19420 4375239 .. 4375266 - -14.2  -4.48483   TAGAATAAATAGAAA        GGGCGGGTTC TGTGAATT GAACCCGCCC         TAGCGTTTATTGAAT 100 60
ISU54_RS19415 4374168 .. 4374203 -  -9.6  -3.41602   TTCACCGGATGATAA    GCCGCCGCAACCGCCAC GGA GTGGTGGCCGCC-CGGC    ATTACGCGTGGTTAA  76 197
ISU54_RS19400 4372246 .. 4372263 -  -4.8  -2.86747   TACTGAGCACAATCA             TGCGGC ACAGCA ACCGCA              AGTTCTGGACATTTA  49 445
ISU54_RS19380 4369645 .. 4369655 -  -3.2  -4.19735   TGGTCTAAAAGTAAA                 CACC CTT GATG                 TCGTTTGATATAAGG  58 152
        degQ 4368102 .. 4368120 -   -16   -4.8048   GGCGCATATGAAAAA             CCTCCGGC TAT GCCGGAGG             ATATTTATTTCTGCA 100 43
        degS 4366128 .. 4366152 -  -8.6  -5.27335   TTCGGTAAATAAAAA          TGCCAGCC GGTGATTGG GGCTGGCA          TTTTTTATGTTTATA 100 122
ISU54_RS19325 4359652 .. 4359662 -    -4  -3.72989   AAATTTATAGGGAAA                 TGTA TTT TACA                 GCGCACTTATGGGAG  54 21
        kdsD 4358375 .. 4358388 -  -6.7  -2.73681   CATTCACCCGAATCA               CTGAC TGGT GTCAG                CTCATCGGGATTCAT  57 198
        kdsC NONE
        lptC NONE
        lptA NONE
        lptB NONE
        rpoN 4354040 .. 4354063 -  -6.7  -2.89564   TGTTTACGCCAGATA          CCGGTGG GAATAAATAT CCACCGG           TATCTGGCTATGTAG  57 395
        ptsN 4353263 .. 4353276 -  -3.1  -2.83271   TTATCGCCATAATTA               GGAAC CTGC ATTCC                GGCTACAAACCGGGG  43 271
        rapZ NONE
         npr 4351852 .. 4351868 - -13.7  -6.06529   GACAGACAAAAAAAA              GCCCCTC AAC GAGGGGC              CTTACAGGATCGGTT 100 250
        pyrB NONE
ISU54_RS19265 4350236 .. 4350254 -  -2.5  -3.61268   TACGTAATGCGGAAA            GGGAT-AT CATA ATGATCCC             GACCATTATAAAGGC  50 115
        ridA 4349769 .. 4349808 -   -15  -5.05113   CGGAGAGAAATAAAA  TCACCACATGCGGCTGGC GATA ACCCGCCGTATGCGGTGA   TGGGGGAGGGATTAA 100 37
ISU54_RS19255 4348942 .. 4348972 -  -7.7  -3.29471   CTGGCAGCATAGGAA       TACCCTAACGA ATTTTCTCA CCGTTAGGGTA       TTTTTTACTGCGGTG  66 98
        treR 4347751 .. 4347764 -  -6.7  -3.06183   TTTATTTTTATGGAA               TGGGA ACGT TCCCA                TTTTGTATTGAAGAT  58 119
        treB 4345966 .. 4345991 - -13.3  -2.55361   TCATTGAAAAATGAC         CCCGCCAGACGA TCA CCG-CTGGCGGG         AGAACACAACTTATA  91 66
        treC 4343954 .. 4343986 - -14.1  -5.30339   AGCAAAACATAAAAA      CAACACCCCCACGCC ATA GGAGAGGGGGTGTTA      GAAAATAGCTTAATG 100 309
         rnk 4343404 .. 4343428 -  -8.5  -2.92656   AAAGTGAGCGATAGA          GGGTAATGGCC TGC GGCGGTTACCC          TCTATTATCTTCTAT  65 104
ISU54_RS19215 4339679 .. 4339722 -  -9.5  -3.02144   TTACGCCCGCCAACA GTATTGAGTCGGGAGCCGGG AGTGA CCCGGC-CCCGCCCGATTAC TGTTTTTTTTCAGCC  71 22
        aaeR 4332518 .. 4332532 -  -4.4  -3.49924   CGTAAATTAGCATAA               TAAATA TCT TATTTA               ACAGTTGTTTCTTAT  52 94
ISU54_RS19175 NONE
ISU54_RS19170 NONE
ISU54_RS19165 4325050 .. 4325068 -  -2.4  -3.85817   ACTGTTTTCCATAAA            GGGCTCT CCTATC AG-GCCC             TCTGTGGGGCCTGTT  51 60
ISU54_RS19160 4320516 .. 4320542 -  -9.4  -2.90941   ATGACAGGGTATAGA         GCCTGACCGG GAAGGGG CCGGTTAGGC         TCTGCGGCTAATATT  71 39
ISU54_RS19155 NONE
ISU54_RS19150 NONE
ISU54_RS19145 4319205 .. 4319236 -  -4.5  -4.57569   CTATCGTTGCAAAAA      GC-GTAACGCTGAC TCCCG GTTAGCATTACAGC      GCACCATCGCCAGGC  68 139
ISU54_RS19140 NONE
ISU54_RS19135 4313391 .. 4313419 - -19.1  -2.88861   TATTACGGGTATAGA        CACCTTCCCTATT CAA AATAGGGAAGGTG        TTTAAAATTAATAAA 100 41
ISU54_RS19085 4298359 .. 4298401 -  -6.9  -3.08068   AGAAAAATATGAAAT TTCTACCACCGAGGCAAGT GTGAA ACTGACCTCGGTGGTTGCT GTAACGATTAATTAG  59 92
        msrP NONE
        msrQ 4296446 .. 4296462 -  -4.4  -4.69435   TCAATAAAAAAAATA              GCGAAC TGTGC GTTCAC              TCATCGATTTACCCC  68 88
        aroQ NONE
        accB 4295173 .. 4295183 -  -3.2  -3.17212   TTACGATTTTATCAA                 GCAT GGA ACGC                 CTCGTTATTCGATGA  46 30
        accC 4293731 .. 4293772 - -15.3  -5.26316   TTATGCCATAAAAAA CTGCCCCCCAATATCAGGT TATT ATCCAATATTGGGGGGCAA  TTCAATTAACCGGCC 100 80
ISU54_RS19050 NONE
        panF NONE
        prmA 4289384 .. 4289396 -  -2.7  -4.07306   ATATTTAATTATAAA                TAACA TCA CGTTA                CGCTTATCTGGTTGA  54 455
        dusB NONE
         fis 4287896 .. 4287921 -  -6.8  -5.32882   CATTATTATAAAAAA         GGCGCTAACC AATTAA GGATAACGCC          TTTTTAAACAACACC  89 55
ISU54_RS18985 4281032 .. 4281066 - -11.6  -2.59683   ACGGCATTTGATAAC    CAGTCCGTAGGCATG GGCTAT CA-GCCTACAGACTG     AAAACTGGGGTTAAC  80 61
ISU54_RS18980 4280230 .. 4280242 -  -2.7  -2.76315   CTAATACGGGGAAAT                GCTTT ACT AAAAC                TGCGGACATAAATGT  42 140
        cspA 4279783 .. 4279801 -   -16   -4.8048   GGCGCATATGAAAAA             CCTCCGGC TAT GCCGGAGG             ATATTTATTATTCGG 100 109
ISU54_RS18965 4277581 .. 4277626 -  -6.8  -2.57211   ATCTTTCCTGACAAG CCCGGGTATGAACTGTCC AACTTTATGG GGCCAGTCCATGCGCGGG TTTTTTACGCTTTAA  56 63
        yghU 4274950 .. 4274975 -    -9  -4.32857   CGCGTGAAAGAGAAA         CACCGCAACGG TATGG CCGC-GCGGTG         TTTTTTTATGTCAGT  86 156
        lpxP 4266326 .. 4266337 -  -5.8  -3.23532   AGTGAAATTAATACA                GCGA AGGT TCGC                 CAATGGGTCGGGTTT  55 6
ISU54_RS18915 4264665 .. 4264681 -  -6.5  -2.64616   TGGTGAGTTATATCA              CCTGCGC GCC ACGCAGA              AAATCAGCAATGAAA  52 323
ISU54_RS18900 4260388 .. 4260411 -  -3.8  -4.54404   TAAATTAACAATAAA          TCTGGCATGC CATG GCATTCAAGA           TAACCAATATAGTTA  65 365
        deoC NONE
ISU54_RS18860 NONE
        rbsD 4252741 .. 4252762 -  -4.4  -2.84192   GAGATGAGCAGCATA           CGGCCTCCC GTTGT AGGAG-CCG           TATGTGTGTTATCAA  46 111
ISU54_RS18845 NONE
ISU54_RS18840 4249520 .. 4249534 -  -2.8  -4.85599   TCTACGTGATAAAAA               CAGG TCAACTG CCTG               TTGCCATTAAAACCT  67 15
ISU54_RS18835 4249185 .. 4249213 - -18.3  -5.38054   TGCCATAAATAAAAA        CCGGGAAGATCCT AAG AAGATCTTCCCGG        TTGTTTTTTGATCGC 100 47
ISU54_RS18805 NONE
ISU54_RS18800 4240025 .. 4240041 -  -2.3  -3.72027   ATCCTGCATTAATAA              TATCG GGTTTGT CGATA              ATGAGTTCAGGGATA  49 78
ISU54_RS18795 4239719 .. 4239742 -  -5.4  -3.39506   TATTGCAAAAGAAAT          TAACTTCTTC CTTT GAAGAATTTA           TCAATGGATTGGTCG  54 110
ISU54_RS18695 NONE
ISU54_RS18690 4212443 .. 4212461 -   -16  -4.36914   CTTGTGCCCAGAAAA             CCCCCAGC TAG GCTGGGGG             TTCAGTAAAGCTTTC 100 259
ISU54_RS18675 4208297 .. 4208322 - -14.1  -3.33815   ATCCCTTTCAATTAA         TATGCCAGCGC TTTC ACGCTGGCATA          TTTACTTATTACTGC 100 34
ISU54_RS18670 4207044 .. 4207070 -  -6.7  -2.90212   GGATTAGTGCACAGA         TAGGAGAAG GTTCCCCTT CTTCTCCTA         TCCACTGTGATTGCG  57 72
        rpmE 4198210 .. 4198224 - -12.8  -5.45652   AGTGGCAACAAAAAA               GGCGCC CAA GGCGCC               TTTTTATCTGACGGG 100 47
ISU54_RS18610 4192518 .. 4192538 -  -6.1  -3.17051   GGGTGATGATTAATA            TTCACACGC AAT GCGTGAAAA            ATTCATATTGGCGAG  57 94
        metF 4191267 .. 4191285 -   -11  -2.73735   AAACAGGCGGAATGA             GTCCGGCA GAA TACCGGAC             TCAGGTAGAAAAGCA  77 230
        argC 4183690 .. 4183702 -  -2.7  -2.57132   TCTGTTGCTCACAAT                TTATG GCT CACAA                TCTGTTTACTGCAAT  41 103
        argB 4182705 .. 4182718 -  -6.7  -2.63182   TCTTAATAGAAAACC               CTTCG TCCT CGAAG                CTACAGGGTTGTTAG  56 145
        argH 4181244 .. 4181269 - -17.6  -3.75897   AACTGTTAATGCAAA         GCGGGCCGCT GCAATT AGCGGCCCGC          CCCGTTCTCAAGATT 100 54
ISU54_RS18570 4178024 .. 4178041 -  -7.1  -3.04144   TTGTTACGGTGAACA             TGGATTA TTAT TAATCCA              TGCGGTTCCATAAGT  61 191
ISU54_RS18565 4177335 .. 4177363 -    -6  -2.77899   CGGTGGTATCAATGA        CTCAGCCAGAAA GTTAT TTTCTGGCTGTT        TTTCTTAAGCGGCTA  53 30
ISU54_RS18560 NONE
ISU54_RS18555 4173980 .. 4174000 -  -6.1  -3.13164   TTTCCAATGACTTAA            CCGAGATAT TTT ATTCCTCGG            CTAACGCGAGGTGCA  57 15
ISU54_RS18550 4173025 .. 4173041 - -11.5  -3.53811   CTCAGGCGGTTCAAA              CCGGGCA CGG CGCCCGG              TTTTTAATCCCCCGT  89 106
        oxyR 4169275 .. 4169293 -  -4.6  -3.80461   CAAGCCATGATCAAA             GGTGAA GCCAACG TTCACC             TGATTGAAGATATCC  56 385
        fabR NONE
ISU54_RS18520 4166893 .. 4166911 - -10.3  -4.83243   CGCAGATAAAAGAAA             GGGCAAC GACAT GTTGCCC             TTAGTTGGCAAGACG 100 111
        btuB NONE
        murI 4162208 .. 4162237 -  -2.9   -3.5393   ATTACTTTCTGCAAA       TAGGCATCTTGAC CGAA GTCAAAATGTTTA        CTGCTTTGGTCACTC  48 383
ISU54_RS18500 4160470 .. 4160480 -  -3.2  -2.86202   GGGACACGAAAATAC                 CGAT CAA ACCG                 AAATTCAACCGTTTC  43 141
ISU54_RS18495 4160295 .. 4160332 -  -7.9  -3.45839   ATTGTTAAAGAGCAA   TATCGTAAACACGACTT GGTA AAGTCATCTTTACGTTA    TTTTTCAGTTCATAA  68 77
ISU54_RS18490 4157210 .. 4157220 -  -6.8  -4.27316   TCTCTCAATTCAAAA                 CACC TTC GGTG                 TTGTAAGGTTAAGCC  74 30
         rrf 4156919 .. 4156939 -  -6.7  -2.59683   ACTTTACCCTATAAG            GGCCAGCGC TCT GCGCTGTGC            AAAACCGCTTTTGGC  56 86
ISU54_RS18480 4156783 .. 4156802 -  -2.8  -2.79684   CTACCAATTGAACTA            CGCC-CC TAATTAG GGTGGCG            GAACGGACGGGGCTC  42 21
ISU54_RS18475 4156685 .. 4156704 - -11.4  -5.80951   ACTTAAAATAAAAAA            CCCCTCGC TTTC GCGAAGGG             TTTTTTATCTGGCAG 100 35
ISU54_RS18470 4154755 .. 4154773 - -13.1  -3.18044   CAGGTGATAAAAGCA             GGCGGGG GCAAG CCCCGCC             ATCTGAATCAATAAC  95 33
ISU54_RS18465 NONE
ISU54_RS18460 NONE
        yjfF 4150984 .. 4151012 -  -9.5  -3.05384   CCTCTGCCCATTTAA        CCCGCCAGTTGCT TGA AACGACTGGCGGT        TGCGCTTTTCTGCCT  68 195
ISU54_RS18445 4149605 .. 4149620 - -11.8  -4.20516   GCCTGATGTAACAAA              GGGGGC CAAA GCCCCC               TAATACTCAACTAAC 100 262
        ilvL 4147546 .. 4147569 - -13.8   -5.4505   CGTGCCAATAAAAAA          CCCCCGGACC TTTC GGTGCGGGGG           TTCTCTTGAGATTAA 100 51
ISU54_RS18430 NONE
        ilvM NONE
ISU54_RS18420 4144348 .. 4144360 -  -6.3  -3.24232   TCTGTCGCAAATAGA                TTGTG TGT CACAA                ATAAATTGTGTGTCG  59 270
        ilvD NONE
        ilvA 4140445 .. 4140469 -  -9.4  -4.25056   TATTTTAGTAAGAAA          CTTCCCTTTC ACTGA GAAAGGGAAA          ATAAACTGGTGGCTA  79 450
ISU54_RS18380 4137358 .. 4137372 - -11.4  -5.08824   TGTGTACCGAAAAAA               CGGCTC CAA GAGCCG               TTGATTGATGCATTT 100 110
        ilvC 4134703 .. 4134725 -  -9.8  -5.36441   GGTGCACATAAAAAA           GCCCCCCTTT TTT ACAGGGAGGC           TCAATATAAAATCAC 100 57
ISU54_RS18365 NONE
ISU54_RS18360 NONE
ISU54_RS18355 4132425 .. 4132453 -  -3.2  -5.47964   ATAAAATAAGAAAAA       CGCCCAA-CAATA CACT CATTGACTGGACG        TTAACTGAAGCATAT  82 47
ISU54_RS18350 NONE
ISU54_RS18345 4131679 .. 4131692 -  -5.9  -4.81163   TAAATATTAACAAAA               CCACC AGAA GGCGG                TTTGGATTATATATT  78 45
         rep NONE
        trxA 4115517 .. 4115528 -    -3   -3.6471   GGGCAAACTACATAA                GTAA TGAC TTAC                 GCAAGATTTTTGCGA  51 377
         rho 4113971 .. 4113989 - -11.7  -5.46698   TCCAAAAGTAAAAAA             CGCCACG ACTGG CGTGGCG             TTTTGACTGATTCAA 100 177
        wecA NONE
        wzzE 4111123 .. 4111135 -  -3.4  -3.32832   GCCAAAAACAGTCAA                CACT TTCAC AGTG                AATCTCTTTAGGTCA  47 302
        wecB NONE
        wecC NONE
        rffG 4107523 .. 4107564 -  -8.7  -2.57795   CCGATGATTAATCGA CTTTGGTGTCTCTCGTAGG TCGC CCAACGATAGACACTATAG  ATTTCAAGGTGCAGG  66 139
        rfbA NONE
        rffC NONE
        rffA NONE
        wzxE NONE
ISU54_RS18225 NONE
        wzyE 4100906 .. 4100922 -  -5.1  -2.90392   TATTTTGGAATGACA              GTATTGG GTT CCATTAC              AATCCTTACAGTTGA  52 31
        rffM 4100120 .. 4100147 -  -8.4  -2.55392   AAGTGATTCAACTGA        GTGACGCCGC TAACCGCT GCGGCGTCAA         GATAAGAAGGGGCGT  63 57
ISU54_RS18210 NONE
ISU54_RS18205 NONE
ISU54_RS18200 NONE
ISU54_RS18195 NONE
ISU54_RS18190 4097597 .. 4097611 - -12.8  -5.78622   TCAGGCGAAAAAAAA               CCCCGC ATT GCGGGG               TTTCTTCTGAAATTG 100 39
ISU54_RS18185 4096194 .. 4096226 - -11.3  -4.19704   GAAGCGCACCCAAAA      TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA      TATGCGCCTATAAGG 100 99
ISU54_RS18155 4088852 .. 4088878 - -10.1  -3.82218   AGGCAGAGGAGTAAA        GCGTCCGCGCCA AGGA TGGCGCGG-CTC         GAGCCTACATGGATG  84 143
ISU54_RS18145 NONE
        dapF NONE
ISU54_RS18135 4086310 .. 4086323 -  -3.1   -3.1364   CAGTGAAGCACTGAA               CTCGGT CAT ACCG-G               CTCGATCCAACGTGC  46 17
        xerC NONE
        yigB NONE
        uvrD 4082388 .. 4082414 -  -9.4  -3.40971   AAATAAAAATAGATA         GGTGGCCGCACT GAC ACTGCAACCACC         ACAAATATCAGATTA  76 38
ISU54_RS18110 NONE
ISU54_RS18105 4079021 .. 4079042 -  -7.3  -5.85178   AAGACCCAAAAAAAA           CCGAAGTCA GTAA CAACTTCGG            TTTTGCGTACCCTGC 100 109
        corA 4077444 .. 4077488 -  -8.8  -5.42862   AGATGCCGAAAAAAA GCCCGGTTACTCAATATTGG GGTTAGT CCAAT-T-GAGTGACCGGGC TTTTTTATTCGTTGC 100 64
        pldA 4074826 .. 4074858 - -14.2  -2.86164   CCCCCAACTATTAGA     TCTG-CACAGGCCGG CTAA CCGGCCTGTGTCTGA      AACTGTGATAACGCC  95 49
        recQ NONE
        rhtC 4072198 .. 4072249 - -10.9  -3.66216   CGCAAAGTATAAAGA GCCTGTCAGGCTAGCCAACCGGGT TAAAT ACCCCGTTGGCTAACCCGTTAG-C GGGACAATATCAGTT  84 21
        pldB 4070328 .. 4070339 -    -3  -2.97825   AGCAACAACATGATA                CATA ATGG TATG                 TTCTAACCTCTGGTG  44 51
        yigL 4069465 .. 4069483 - -12.4  -3.28041   AACGCCAAGGAGGAA             GGGTGACC AAA GGCCACCC             TACTCCACAGCATCA  95 63
ISU54_RS18055 4067768 .. 4067784 -  -6.6  -2.67059   GCAAAAGACATCAAG              TTGACC GATCT GGTCAA              AGAAGCCCATGCCAG  52 286
        glpA NONE
        glpB NONE
        glpC 4061873 .. 4061889 -  -6.5  -2.78463   ATCTGTCCCAGCAGA              GCGCG GTTCACT CGCGC              TCTGTTTTATTGACT  55 156
        tusA 4059679 .. 4059690 -  -7.2  -3.36878   CGCATTGACCCATAA                CCGG CTGA CCGG                 GTTGGCGGAGATTAT  62 330
ISU54_RS18005 4055738 .. 4055767 -  -2.2  -4.29396   AATTACCCACTAAAA       GCTATTAATGGC AAAAAA ACCATTAATGAC        CCAAAAAGCTGTTAA  58 137
ISU54_RS18000 4055128 .. 4055157 -  -6.3  -3.48105   GCAACTGAGTAAACA       CCCAGGCGCTTAG ATAA CTCAGTGACTGGG        GTGAGCAAGGGCAGC  61 116
        ftsY 4052163 .. 4052173 -  -3.2  -2.72511   CTGACCTGTTCAAAG                 CGAA TCA TCCG                 TATTAATCCTCTCGG  42 28
        ftsE NONE
        ftsX NONE
        rpoH 4049328 .. 4049348 - -11.2  -4.34402   CTGGGCACAGCAAAA            GGGCGATA ATCAA TATCGCCC            TTCTTTATCGTGCCG 100 68
ISU54_RS17965 4048613 .. 4048645 - -11.3  -5.41143   TATCTGCCAAAAAAA      TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA      TATGCGCCTATAAGG 100 99
ISU54_RS17955 4046434 .. 4046454 - -10.4  -4.70659   CTGTAGAGGGAAAAA            TCCCCCCG GAATA CGAGGGGA            TGCAGTTGATAGAAG 100 115
        livH NONE
ISU54_RS17945 NONE
        livG 4043340 .. 4043352 -  -2.7  -2.97439   AACTTGATTAAATGA                CAACA TGT TATTG                TTTATGCCTCGCCCG  43 63
        livF 4042603 .. 4042613 -  -3.2  -3.40371   GATCCGAGTAACGAA                 CGCT GCT AACG                 CCCCTGCAACGTCAA  47 56
ISU54_RS17930 4041954 .. 4041964 -    -4  -3.33798   ATGGGTATAAATAGA                 GTTA ATA TAAC                 GTAGTAATACAAAGG  51 16
        ugpB NONE
        ugpA NONE
        ugpE NONE
ISU54_RS17880 NONE
        ugpQ NONE
ISU54_RS17870 4028833 .. 4028859 -  -6.7  -3.86202   TGCTATCAGAGGAAA         TCTAGCATC GAAAGTGCA GATGCTAGA         TTCTCATATTAGCTG  67 51
ISU54_RS17865 4027442 .. 4027454 -  -3.4  -4.58395   CCCATCGTCGAAAAA                TGTG GATAA CACA                TTGCTGCTGATCCAG  65 204
        metE 4024360 .. 4024375 - -11.8  -5.52096   AAACGCAATAAAAAA              GGGCGC GAAA GCGCCC               CAAAAGCCCCACTAC 100 60
         udp 4022241 .. 4022260 - -11.4  -4.36862   AGATGAAATAAAGAA            CGGGCCAG TAAA CTGACCCG             AGAACAAACCCTCTA 100 59
ISU54_RS17840 4021128 .. 4021139 -    -3   -4.0492   TAAGCCGGAGAGAAA                CTAT TAGT ATAG                 ACAACGGGCTAGTAT  56 229
ISU54_RS17835 4019112 .. 4019139 - -13.6   -5.5074   TAACTTAACAAAAAA        TAAACGGCTAGA AGAT TCCAGCCGTTTA         AACAAATTAGCACAA 100 54
ISU54_RS17830 4018307 .. 4018323 -  -5.2  -3.78004   TGAGGATAAGAAACA              GGTTAA AACTA TTAACC              GTTGAACACCCGCTA  61 68
        rmuC 4016620 .. 4016644 -  -7.7  -3.75015   AGAACTCCGATGAAA          GCCCCACACCC CCT GGTTGCGGTGC          CAATTAAATTACTCT  72 34
        ubiE NONE
ISU54_RS17815 NONE
        ubiB 4013372 .. 4013382 -  -5.4  -2.75498   TATTCCACAGAGAAT                 CGTA TTA TACG                 TTATACAGCCTCTGT  50 154
ISU54_RS17805 NONE
        tatB NONE
        tatC 4011584 .. 4011599 - -11.8  -4.45168   GTTCCAAAACAGAAA              CCGCCC AGAA GGGCGG               CTAAATATCAACGCA 100 46
ISU54_RS17785 NONE
ISU54_RS17780 NONE
ISU54_RS17775 4008828 .. 4008848 - -10.3  -3.75153   TTCTCCTAACTCAAA            CCAGCCGGA AAA CCCGGCGGG            CGTTTTCATCAGTTT  86 0
        hemB 4007727 .. 4007763 - -12.4  -2.73443   TCATCATTATAGAAT    TCATTCAGATAGGCGC AGTTA GTGCCTATCTGAATGC    TGTGACTCTTAGTTA  88 48
        ubiD NONE
         fre 4004601 .. 4004620 -  -4.9  -3.14013   GACATCAAGAAATTA            GGGGCCT GAACGT AGGCCCT             GATAACTGAGGTATA  51 93
        pepQ 3999499 .. 3999511 -  -3.3  -3.54475   GCGGGTATCAGATAA                GGCTG CAT CAGGC                CAGTTTCAGATCACG  49 20
ISU54_RS17735 3999223 .. 3999244 -  -5.2  -3.01791   ATTTCTTGTTGAACA           TTTGCAGT TGCCAG ACCGCAAA            CTGTTTTAACAAATC  52 78
ISU54_RS17730 3998634 .. 3998654 - -12.5  -3.68324   GACCGGCAATAAATA            TCCTCCGGC ATA GCCGGAGGT            TTTTCATATGCGCCT 100 105
        trkH NONE
        hemG 3995734 .. 3995763 -  -2.9   -3.5393   ATTACTTTCTGCAAA       TAGGCATCTTGAC CGAA GTCAAAATGTTTA        CTGCTTTGGTCACTC  48 401
ISU54_RS17710 3994034 .. 3994057 -    -3  -3.81929   CAACAAGGTACTAAA          GCCCGACCAA TTTC TCAGCCCGGC           TTTATTTGCTCGTTA  53 90
ISU54_RS17705 NONE
ISU54_RS17700 3993761 .. 3993807 -  -3.9  -3.45839   ATTGTTAAAGAGCAA TATTTCACAACACACTG-TGCC TTGC GACCGCAGTACGTTTTGAAATA GTTTTATATGGTGGA  51 34
ISU54_RS17695 3990676 .. 3990686 -  -6.8  -4.27316   TCTCTCAATTCAAAA                 CACC TTC GGTG                 TTGTAAGGTTAAGCC  74 30
         rrf 3990429 .. 3990447 -  -8.1  -5.24989   GCACACAGCAAAAAA             CCCACGC TTTGG GCATGGG             GTCTTGGCTTTATTT 100 44
        murB 3988975 .. 3988986 -  -4.4  -3.96327   ATCTTTCACGATAAA                TGCT CCAC AGCA                 TTAACTTCACCATTA  59 4
        birA 3987972 .. 3988007 -  -2.9  -4.64676   GTACGCTTAAGAAAA   TAATCTATACGGGAGAT AGTT ATCTCCCAT-TA-ATTA    ATCAGACACCTCGAA  64 27
ISU54_RS17665 NONE
ISU54_RS17660 NONE
ISU54_RS17655 NONE
ISU54_RS17650 3983625 .. 3983642 -  -6.3  -2.84126   GCAGAAATCTGAAAG             GAAG-GGC TTG GCCACTTC             ACTCTTCATCGAGGT  55 112
ISU54_RS17645 3983488 .. 3983498 -  -3.2  -2.56596   CGCTCTACCAACTGA                 GCTA TAT CAGC                 ACATCTTGGAGCGGG  42 32
ISU54_RS17640 3983339 .. 3983354 -  -4.6  -3.19175   CTCTAAGACACGGAA              TCGGTG GTTT CACCGT               ATCAACCAAGCATAT  51 94
         tuf 3982088 .. 3982105 - -11.3  -4.91712   TGCAACGTATAAAAA             GGGCATC AAAT GATGCCC              TTTTATCGCATGTCG 100 50
        secE NONE
        nusG 3980880 .. 3980908 - -16.2   -5.2853   CATCTAAAAACAAAA        GGCGCGAAATTA TATTT TAATTTCGCGCC        TAAGACAAGACTCAA 100 66
        rplK NONE
        rplA 3979560 .. 3979598 - -13.3  -3.13565   AACGATCAACAGATA   GCATGGGCGTAAGATTT TAGAC AAACCTTACGCCCACGT   AAAGCGATAAAAGCA 100 49
        rplJ NONE
        rplL 3978260 .. 3978285 - -14.1  -4.64766   CCTACAGCGCAAAAA         GGCTGATGACT AAAA AGTCACCAGCC          ATCAGCCTATAAAGT 100 65
        rpoB 3973911 .. 3973942 -  -7.3  -2.72661   GACCAGTGCGAACCA      CCAGCAAACTCCC GGCTAT GAGAGTTTGCCGT       CTGGTGAAGAATTAC  58 37
        rpoC 3969559 .. 3969577 -   -16   -4.8048   GGCGCATATGAAAAA             CCTCCGGC TAT GCCGGAGG             ATATTTATTTGGTAG 100 53
        nudC NONE
ISU54_RS17545 NONE
        hemE NONE
         nfi NONE
ISU54_RS17530 3957624 .. 3957657 -  -4.5  -3.57971   ATAGCCACTTTTAAA     TC-GCCCCCCAAATGT AGA ACAGACAGGGGGCAGA     TGTGAAGCCTTAAGA  57 77
        hupA 3957204 .. 3957217 -  -5.2  -4.99043   GCTGCATAAACAAAA               GGGG TTTTAT CCCC                CCCCTGCTTATTATT  78 53
ISU54_RS17520 3956545 .. 3956559 -  -7.1  -2.53263   CTCATCGGTAACTTA               CAGGC TGCCT GCCTG               AGGTTCCCAACGGCA  58 8
ISU54_RS17505 3951170 .. 3951193 -    -3  -3.81929   CAACAAGGTACTAAA          GCCCGACCAA TTTC TCAGCCCGGC           TTTATTTGCTCGTTA  53 90
ISU54_RS17500 NONE
ISU54_RS17495 3950897 .. 3950943 -  -3.9  -3.45839   ATTGTTAAAGAGCAA TATTTCACAACACACTG-TGCC TTGC GACCGCAGTACGTTTTGAAATA GTTTTATATGGTGGA  51 34
ISU54_RS17490 3947812 .. 3947822 -  -6.8  -4.27316   TCTCTCAATTCAAAA                 CACC TTC GGTG                 TTGTAAGGTTAAGCC  74 30
         rrf 3947564 .. 3947584 - -10.4   -4.8048   CGCGCACAGCAAAAA            CCCCACGC TTTGG GCATGGGG            TCTTGGCTTTATTTG 100 43
ISU54_RS17480 3945996 .. 3946015 -  -7.8  -4.31859   CGAACAAAATAATAA            GGAGAGGA TGAT CCCTCCCC             AATATCCGTACCAGG  79 46
ISU54_RS17465 3942471 .. 3942484 -  -9.5   -4.1721   ATTTACAGGTTAAAA               GGCCC CTAG GGGCC                TAGATTGCTGACAAA  85 66
        gltP 3936193 .. 3936221 - -17.5  -5.38054   GGCGACAAATAAAAA        CTCCCCGTCAGTA TGA TGCTGACGGGGAG        TGGGTAGATACTATT 100 106
ISU54_RS17430 NONE
        sctD NONE
ISU54_RS17420 3929362 .. 3929373 -  -4.4  -2.79915   ATTGACTTCATGATA                TTCC TTAG GGAA                 CAATTAATCTTATGC  46 116
        sctF NONE
ISU54_RS17405 NONE
        sctI 3927407 .. 3927419 -  -5.5  -3.92602   CGAATACTTGATAAA                CACCG AGG CGGTA                TGCGGAAGCGGGTTT  63 457
ISU54_RS17390 NONE
        sctL NONE
ISU54_RS17380 NONE
ISU54_RS17375 3922356 .. 3922366 -  -6.8   -3.4285   TGATTCAACCGACAA                 CCTG CGC CAGG                 TGTTCCAGAGTGGTA  63 4
ISU54_RS17370 NONE
ISU54_RS17365 NONE
ISU54_RS17360 3920570 .. 3920589 -  -4.2  -4.52873   TTCGCATAAAAACAA            GATGGACA GTCT TGTCCCCC             GCCCCTTTCAGGGGT  66 64
        sctR NONE
ISU54_RS17350 NONE
        sctT NONE
ISU54_RS17340 3917398 .. 3917418 - -11.3   -2.8577   AGGTAACAGGGAAAG            TAGGCTTAT ATA ATAAGCCTA            TTGAGGTTATTGACA  81 315
        yedE 3916118 .. 3916129 -    -3  -2.58758   AGAATGGCTCATAAG                GATT CCTT AATC                 AGGGCCGAGGTTGTC  42 7
        yedF 3915620 .. 3915644 -    -3   -3.4268   TTATAATGCTAAAGA          TAAAGAATAT GGCCT ATATGCTTTA          TATTACCCTAGCAAA  47 226
ISU54_RS17320 NONE
        metC 3911988 .. 3912000 -  -4.7   -5.0538   CGCTATGCTAAAAAA                CAGCC TAT GGCGG                TTCCAAAGCACCAAC  77 126
ISU54_RS17230 NONE
ISU54_RS17225 NONE
ISU54_RS17220 3893226 .. 3893242 -  -2.3  -3.29211   CAATGGGAAAGCCAA              TATGG GTGGATT CCATA              ATTCCTCAAATTATT  45 46
ISU54_RS17215 NONE
ISU54_RS17210 3891407 .. 3891431 - -12.3  -3.61268   CACTGAAGTGTTAAA          TATTCAGAGCA TTT TGCCCTGAATA          TATGAATACGTTAAT 100 156
ISU54_RS17205 3890763 .. 3890781 - -12.4  -5.81412   TTGAGCGAAAAAAAA             CCCTGCCG ATG CAGCAGGG             TTTAATTGAAACGGG 100 47
ISU54_RS17200 3889407 .. 3889421 -  -2.9  -4.88687   TTAAACAAAAAATAA               TTTTG CCAAT CAAAA               ATAGCCTTGGCCATA  67 56
ISU54_RS17195 3886816 .. 3886826 -    -4  -2.57132   TGCTGCTTTTATAAT                 GTAA AAC TTAC                 TGACAGACCGCATCG  45 22
ISU54_RS17190 NONE
ISU54_RS17185 3885422 .. 3885432 -    -4  -4.21194   CTTTATCAGGTAAAA                 TTCT TAT AGAA                 CAAGGCATTCACAAG  61 336
ISU54_RS17180 3882926 .. 3882936 -  -2.6  -3.60631   TAATAAATATGAGAA                 TTTT ATA AAAA                 TGGGCACATTAGTCA  50 320
ISU54_RS17175 3879782 .. 3879795 -  -8.1  -2.85216   TATCAGTGACAACTA               TGCCG TCGG CGGCA                CGATAGGTGCACGGG  59 395
        ubiC 3874605 .. 3874618 -  -8.1  -2.73364   CGCCTACCGGAATCA               CTGGC TTAA GCCAG                CGCATCAGGATCCGT  60 69
        ubiA 3873516 .. 3873538 - -11.3  -3.89291   TGAATACCATAACAA           TGGCCGGAC TCATT ATCCGGCCA           TTTTTTACCATTACC  95 117
ISU54_RS17150 3870391 .. 3870401 -  -2.4  -2.94099   TGCTGTGAGTATATA                 CAGC TAA GCGG                 GTGTTGGGAACCAAA  42 97
        lexA 3869689 .. 3869710 - -12.3  -3.32233   GAATCATGAAATAGA           GCCGTACCT CAAC AGGCACGGC            TTATTATTCTGGGAG  95 55
        dusA 3867622 .. 3867655 - -15.5  -3.13908   AAGTGAATGAGTGAA     CCCCGAATCACTTAC GCCA GTAAATAATTCGGGG      GCCCAATTTGCCGAA 100 135
        pspG 3866725 .. 3866752 - -14.9  -4.69664   TACATGATTGAAAAA        CAGAGGGCCCC GATTAA GGAGCCCTCTG         TCATTACACTTTCTT 100 304
        dnaB NONE
         alr 3862663 .. 3862680 -    -4  -3.92522   TCCGAATTGCAGAAA             GGCGGC AACGGA GCGGCC              CTCCTAGGGCTTACA  59 134
ISU54_RS17110 3860904 .. 3860918 -  -3.5  -3.61715   TATCTCCTGTAATAA               GCTAC GCCAT GCAGC               TAAAAGATGCATAAA  53 517
ISU54_RS17105 3860439 .. 3860468 - -10.8  -2.84098   CCGTTTAATGAACCA       CTCTGGGGCAAT CAATGT ATTGCTCCAGAG        GGTATGACATTCAGC  77 81
        ssb1 3856474 .. 3856493 -   -15  -3.52073   TCCTGAATACTAGAA            CCGCGCCA TCCG TGGCGCGG             CCGTTTAAAGCTAAT 100 114
ISU54_RS17065 3851008 .. 3851027 -  -2.8  -3.34398   GCTGCCGCCTAAATA            CGAAACTG TGAG CTGTTTCA             CTTTCACTTTCGTCA  46 38
        rhaS 3849961 .. 3849984 -  -2.3  -3.05963   ATTTTTACCGTAATA          CCCTTCACG CCCTTT CTTGCAGGG           CAATTCAAGCGGCTA  42 38
        rhaR 3848908 .. 3848940 -  -5.6   -2.8789   TTAAAGATGATGATA     TTGACGGGCAGCGTT GAAA AAC-CTGCCCGTTAT      CTTATGGCTAATCGT  53 77
ISU54_RS17035 3843206 .. 3843216 -  -6.8  -3.93664   ATGCAACATATTAAA                 CAGG TTG CCTG                 ATTCTATTTAAGACC  69 355
        aegA NONE
ISU54_RS17015 NONE
        fdhF 3837072 .. 3837114 -  -8.3  -4.77173   CGGTTACAAAATAAA TAGCTGTCGCCACGGCGAG TAGGT CTCGCCGTGGCATAATCAA CGCTCAATCACGACA 100 43
        fxsA 3830738 .. 3830769 -  -6.8  -2.52676   TATTCCTTCAAGGGA      GGCGACCAAAAAAAT TTC ATTTTTTTC-TCGCC      TGGCGGTAGATAATT  55 136
ISU54_RS16980 3830326 .. 3830337 -  -5.8  -3.02381   TCAGAAGATTAGAGA                GCGT GATT ACGC                 TTCAACAATTGCCAG  54 20
        groL 3828531 .. 3828562 - -16.8  -4.38154   ACAGTCTTCACAAAA      TAAAAGCGAGCAGG TCAC CCTACTCGCTTTTA       TCAACAGCTTTACCT 100 102
ISU54_RS16970 3827176 .. 3827186 -  -8.2  -3.06265   ATTGGATAAAGTACA                 GGGC GCA GCCC                 ACTTTATGGTCGATG  62 456
         efp 3825596 .. 3825610 -  -4.9  -4.53163   CCAGATAGCAGAAAA               CCGCC ATTTA AGCGG               TTTCCTTTCGTTCTT  68 117
        sugE 3824891 .. 3824914 -    -3  -4.15565   TGCATGATTTGAAAA          TCCACGTCCC GGCA GGGAAATGGG           TATTCTATGGCCTTG  59 252
ISU54_RS16930 3821209 .. 3821237 -  -5.2  -4.06903   AACTCCGAAATCAAA        CAGGGGATGCAG TCTAC CTGTATCCCGCG        CCCCAGACAAATCTG  63 134
        epmA 3820112 .. 3820133 -  -6.5  -5.48514   AGTAAGAAATAAAAA           TGCCCTGCG CCTT CACAGGTCA            GGGTATTTGTTTTTG  91 101
         orn 3813403 .. 3813441 -  -4.6  -3.05596   CATTTTTCTATTTAA   GTGTCGATTAAAACAGCA ATA TGGTGTTTTTACCAGCAC   CAGACAGAGTATATA  50 409
ISU54_RS16900 3813171 .. 3813190 -    -8  -3.05816   TTACTTCTGACTGAA            GTTCTTTA TTGC TAAAGAAC             TTGGAGCGGGAAACG  62 27
ISU54_RS16895 3812779 .. 3812798 -  -2.9  -5.69262   GCATAAAAATAAAAA            TGC-CTTG GCAAT CAAGTGCA            AAAAAAAGCACAAGT  84 252
         nnr NONE
        tsaE NONE
        amiB NONE
        mutL NONE
        miaA 3804628 .. 3804641 -  -4.5  -3.33696   GTTGTTTTTAACTAA               GAACC TATC GGCTC                GAAAATAAACTGCGT  53 90
         hfq 3804214 .. 3804225 -  -7.2  -2.88776   TCAAACGGATCAAAG                CCGC TAGT GCGG                 AGAACATAAGCTTGA  59 85
        hflX 3802883 .. 3802906 -  -3.3  -2.66274   TTGGGCATAATCAAG          TAATTAACC GCACCA GATTAATTA           TTTTGAATATAACTG  42 19
        hflK NONE
        hflC 3800260 .. 3800278 -  -9.5  -4.43213   TTCAACACATGAAAA             GGCCCGC ACTAG ACGGGCC             TCGGTGTTACGTTCA  95 139
ISU54_RS16840 NONE
ISU54_RS16835 3798506 .. 3798535 - -15.9  -2.80816   GCTGGATGTATTAGA       CAATAAACCGGAC ATCA GCCCGGTTTATTG        TTTCGAACACAAATA 100 112
        nsrR 3797743 .. 3797753 -  -5.4  -3.33922   AGCGCCGTTAAAAAT                 GGTT TAA AACC                 CATTTTTCGTTGGCT  55 100
         rnr 3794995 .. 3795019 -   -10  -3.08072   AATAATTAAATTATA         TG-CGGGCGAC AAAA GCCGCCCGGCA          AGTAGCACACCACCA  74 59
        rlmB 3793926 .. 3793947 -    -3  -5.08088   AATTCCCAACAAAAA           GCCAACAT ACAAAG ATGTTGGT            TTGAGGTTATTGACA  71 272
ISU54_RS16815 3791959 .. 3791969 -  -5.4  -3.59738   CAGGAGACGTTGAAA                 CTGA AAT TCAG                 CGCAGGGCCAATGCC  56 199
ISU54_RS16805 3791107 .. 3791122 -  -4.6  -4.37092   AGGGCCGTTATAAAA              CGACGC TTCA GCGTGG               AGTAATGGCCCCCCG  66 374
        yjfP 3788830 .. 3788843 -  -3.1  -2.95204   TCACGGTTAAATAAT               CAGAG CACC CTCTA                TATCAGAGACGGAGA  44 43
        rpsF NONE
        priB NONE
        rpsR NONE
        rplI 3787008 .. 3787026 - -11.7  -4.48987   TGGGCACAAGCAAAA             CGCCAGC ACTAG GCTGGCG             TTTTAACAGGTTACA 100 51
ISU54_RS16765 3786292 .. 3786324 - -11.3  -4.50058   TACCGATAACCAAAA      TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA      TATGCGCCTATAAGG 100 99
ISU54_RS16750 3783928 .. 3783960 - -22.9  -4.44046   CTTATCGTAAATAAA      CGCCAAAGGGCGACA CCC TGTCGCCCTTTGGCA      TAATCGGTACCAAGG 100 43
        cysQ 3779867 .. 3779895 - -15.3  -2.84812   ACTGACATCAGCAGA        GGTGCAGCAGGTC ATC GACCAACTGCACC        AACTTGTGCAGCAAT 100 45
ISU54_RS16725 3778733 .. 3778752 - -12.1  -3.82946   TCACGGTAAACATAA            CGGCCCC TGAGTT GGGGCCG             TGATTAAATCTGCTC 100 74
ISU54_RS16710 NONE
ISU54_RS16705 NONE
ISU54_RS16700 3770069 .. 3770120 -  -7.2  -5.60993   TCGCCTATAAAAAAA CACCGCCTATCGTGAACAGGCCCCA AAA TAGGGCC-GTTTACCTTGTGCGGTG TTTTTTTGTTACTGC 100 67
         mpl 3766472 .. 3766489 -  -4.1  -3.97019   ATTAAGTGTAAATAA             TAACCGC CAAT GAGGTTA              TTGACAAAGTGCCCG  59 287
         mdh 3763866 .. 3763881 - -10.4  -2.59431   GCCTCGCAGAAGCGA              GGCCCA TGGA TGGGCC               GAGTAACGCTTGCAG  74 75
ISU54_RS16660 3762622 .. 3762640 - -10.3  -3.96224   GAAATTATTTAGAAA             CCCGGAT TCACC ATCCGGG             TTTATCCCATTAATG  89 76
        rplU NONE
        rpmA 3760724 .. 3760746 -   -12  -4.84529   CCAGAAATGTAAAAA           GCCCCGCAAC GAA ATTGCAGGGC           TTACATCTATTTACA 100 54
ISU54_RS16640 NONE
        cgtA 3758475 .. 3758506 -  -9.5   -5.0133   CACCCTGCCAAAAAA      TAAGGGCCACCAC GAAAAA ATGGCAGCCCTTA       TTCAAAGAATAACTG 100 47
        greA 3754439 .. 3754452 -  -9.5  -4.36914   TTTGTTCTGATAAAA               GGCCG CTTG CGGCC                TTTTACTTTTCTTTA  88 92
        rlmE NONE
        ftsH 3751270 .. 3751287 - -11.3  -5.84381   TTAGCAACAAAAAAA             CCCTAGG CAAG CCTAGGG              TTATATTAGTCACAA 100 69
        folP NONE
        glmM 3748909 .. 3748923 -  -2.8  -4.00469   TGAATACTAACCAAA               GCGT CTAGTTC ACGC               AAGGGCAATTTCATC  54 130
        secG 3748389 .. 3748423 -  -2.9  -3.07816   CCGGCACTGATTCAA     CTGGTTGTTTTTACT GTCCA AGTAACAACAACCCT     TTTAAAACTCTTTTT  44 73
ISU54_RS16580 3748254 .. 3748264 -  -3.2  -2.84504   ACGTGGCAAATACTA                 CGTC GAT AACG                 ATAAAAAAGCAAGTT  43 53
ISU54_RS16575 3748142 .. 3748156 -  -7.2  -5.79526   ACATTTGAAAAAAAA               CACTTT AGG AAAGTG               GTTGCGGGGGCCGGA 100 24
        rimP NONE
        nusA NONE
        infB 3743226 .. 3743251 - -13.3  -2.87931   TGGATTCTCCAGACA         GTTTGGGGGGC CAAG GCCCCCCAAAT          GGATATTTGCAAATC  93 49
        rbfA NONE
        truB 3741814 .. 3741825 -  -7.2  -2.53876   CGGGATCGCAAGGCA                GGCC GTGT GGCC                 TACTTTTTATTTTCT  58 25
        rpsO 3741352 .. 3741398 - -15.4  -3.05384   GGGTGTTTCATTGAA CCGAACCTCCAGATCATGGAT AAAAAG ATCCAAGATCTGG-GGTTCAG TGCAACTTGGCCCCT 100 61
ISU54_RS16540 3739824 .. 3739846 -  -5.7  -2.72096   GCGACTAATGACAAT           CCTTAACTT TCATT AAGTTAAAG           TCTCTCATTAGCCGC  52 172
         pnp 3737566 .. 3737597 - -13.8  -3.48276   CCGCCCCTGAGATAA      CACAGCCCCTTACC GATG AGCAAGGAGCTGTG       GAATGACTTAATTAC 100 37
        nlpI 3736555 .. 3736572 -  -4.1  -3.15544   TGTTAGGGTGATTAA             CTTTGGT AAAA ACCAAGG              TATATCAGGCTGATA  49 53
        yrbN NONE
ISU54_RS16520 3734367 .. 3734382 - -10.4  -5.65177   ATAGCCATAAAAAAA              CCAGCC CGAA GGCTGG               TTTTTACGTTTAATC 100 62
ISU54_RS16515 NONE
ISU54_RS16510 3733262 .. 3733277 - -10.4  -5.61596   ACCGCCATAAAAAAA              CCAGCC CGAA GGCTGG               TTTGAGGTTGTTGAC 100 228
ISU54_RS16495 NONE
ISU54_RS16490 NONE
ISU54_RS16485 3725847 .. 3725878 -   -16  -3.39895   TGCCTTATCAAGTAA      TAACAGGGAGGTCA TTGC TGGCCTCCCTGTTA       TTCATGTTTATTAAC 100 112
ISU54_RS16470 NONE
ISU54_RS16465 3722376 .. 3722392 -    -8  -5.32396   ACAGCAAAAAGAAAA              GCTGGT GATTG ACCAGC              CGAGGTTATTGACAA 100 235
ISU54_RS16445 NONE
ISU54_RS16440 NONE
ISU54_RS16435 NONE
        ugpC NONE
ISU54_RS16425 NONE
ISU54_RS16420 NONE
ISU54_RS16415 3711090 .. 3711102 -  -6.2  -3.61178   GCTATTTACTGCAAA                GCCC CAACC GGGC                TATCGCTTATTTAAC  59 324
ISU54_RS16325 3692924 .. 3692947 -    -3  -3.80573   TCCACGATGACCAAA          CCACCATCGG TAAG CAGATGGCCG           AACAATATGATTTAC  52 469
        rraB 3691252 .. 3691274 -  -8.4  -2.76696   CTCCCCTGCAAGAAT           TTCAGGGCGC CAT GCACCCTTAA           TGATGACAAAAAACT  64 185
        lptF NONE
        lptG NONE
ISU54_RS16280 3682886 .. 3682901 -  -6.8  -5.47218   TTTTAGGCAAAAAAA              GCCACC TTGC GGTGAC               TTAATTTTCATACTA  91 42
ISU54_RS16275 3681419 .. 3681443 -    -8  -5.39755   CACAATTAGAAAAAA          TAAGGCATAT CAGAT ACATGCCTTA          CAGAAACTTTTTTTA 100 42
ISU54_RS16270 NONE
ISU54_RS16265 3677930 .. 3677945 -  -4.6  -4.37092   AGGGCCGTTATAAAA              CGACGC TTCA GCGTGG               AGTAATGGCCCCCCG  66 374
ISU54_RS16250 3675773 .. 3675793 - -12.5   -3.6761   GTGTTTTAATAAATA            TCCTCCGGC ATA GCCGGAGGT            TTTTCATATGCGCCT 100 105
ISU54_RS16230 3672455 .. 3672476 -  -5.9  -2.78384   GCTTGGCCCAGTAGA           TAAGGGC GAAAATAG GCCCTTA            TCTACCACACAACCC  53 132
        ampD 3667155 .. 3667172 -  -7.1  -3.55714   ACATCGAGCATACAA             TTACACT GGCT AGTGTAA              TGCCACCGGCAACAT  66 43
        ampE 3665649 .. 3665688 - -14.4  -3.06312   AAATCCGCTAGTTAA  CCCTA-CCTAGGCCAGCAC TTA GTGCTGGCCTAGGCTATTG  ACAAAGTACCTATGG 100 383
        pdhR 3662523 .. 3662536 -  -5.3  -3.61517   AGTTGCCGCTAATAA               TTCTC AAAT GAGAA                TCCAAAACGAGTTAT  59 78
        aceE NONE
        aceF 3658158 .. 3658182 - -17.2  -3.54743   GAGCAGTAACCACAA          CAAGGCCGGC ACGAA GCCGGCCTTG          GCGATTACATCACCA 100 30
        lpdA 3656366 .. 3656385 - -11.4  -5.93809   TGGGCACAAAAAAAA            CGGCCCCT ATGT AGGGACCG             TTTCACTTTTATTTA 100 97
ISU54_RS16170 3655650 .. 3655682 - -11.3  -4.16943   GCGTATAGGCTAAAA      TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA      TATGCGCCTATAAGG 100 99
        acnB 3652516 .. 3652536 - -16.1  -4.45168   TTTTTAAAATAGAAA            CGGGAGGCC AAT GGCCCCCCG            TTTTAGCTGATGCGA 100 78
ISU54_RS16160 3651647 .. 3651670 -  -5.2  -5.27477   AGCGCAATGAAAAAA          GGCAACG-CCA CAC TGGTCGCGGCC          CTATCCTATTTCACG  86 286
        cueO 3646302 .. 3646325 - -18.2  -5.24129   CGGTTTTATAAAAAA          CACCCCGGTC AACC GACCGGGGTG           TGGCTCAGGCGCTGA 100 30
         hpt 3645277 .. 3645291 -  -7.8  -4.57341   AAGCGCGGGCAAAAA               GCCATG ATC CACGGC               TGGGTATATGGTATT  79 308
ISU54_RS16120 NONE
ISU54_RS16115 3642759 .. 3642811 -  -3.5  -3.64103   TACCCACATTGCAAA GCCCTTGGTGTTACAGCAA-G-TCA GCAAA CGAGCGCCGCTGTAGCGCCAAGGAC AAAGGGAAGGGAATA  53 43
        hrpB 3630391 .. 3630405 -  -4.2  -2.55267   AAACATCTGAATTTA               TTGGCT ATC AGCCAT               GATATATCACTTATC  45 32
        mrcB 3627773 .. 3627806 -  -8.7  -5.95539   GCGCAAAGAAAAAAA     TTGGCGGGCGCAGTC TGTA AACCACGCCCGCCGT      CACATTTTATTGACC 100 48
        fhuC NONE
        fhuD NONE
        fhuB 3623503 .. 3623534 -  -6.6  -3.61398   GCTCTTTGTCAATAA      CCTCTAATCTCCTC TCCG GAGGAGATTTCAGA       CTGCTGACAACCCTC  65 122
        clcA 3620121 .. 3620147 -  -8.1  -3.10796   CTCGATTATCTAATA         CCTGAGTATTT CATTC AAGTACTCAGG         GCTAATGTTATATTA  63 38
        erpA 3619417 .. 3619440 -  -6.6  -5.31275   TTTGAGCATAAAAAA          CCGCTGCCAT TCTC ATGGTCGCGG           TTTTTTAGCGATGCT  89 265
         dgt 3615268 .. 3615280 -  -3.3  -3.83466   AAAAATGAATAAATA                GCGAC TAT GTGGC                CGACTAATGCCGTAT  53 169
        degP 3613659 .. 3613683 -  -9.3  -5.15526   ATAGAAAACCAAAAA          GGGCACAGC GAGATAA ACTGTGCCC          TTGAGCTAGATGGAA 100 123
ISU54_RS15990 NONE
ISU54_RS15985 NONE
        relA 3607984 .. 3608005 -  -4.3  -3.00704   AGCGTCGAAAGCACA           GGCAGATTG ATTG CGACCCGCC            ACGCCCCCGAAATGT  47 154
        mazG NONE
        pyrG 3605203 .. 3605226 - -13.1  -3.02109   AAAACTCCAGACAGA          GGGGGCGAC ATCTCA GCCGCCCCC           TACCACCAAATATTT  95 40
         eno 3603780 .. 3603793 -  -9.5  -5.66684   CAACGCATAAAAAAA               CCCGC CGAA GCGGG                TTTTTAATTAATTAG 100 97
ISU54_RS15960 3602866 .. 3602887 - -10.2  -3.72576   CCGGCCTCCACCAAA           CTGGCTAC GCTCGG GTAGCCAG            TTTAACTGTATCAGA  82 44
        queE 3602104 .. 3602120 -  -4.3  -4.19817   TCCATCCAGCTAAAA              CCGCGAC AGC GTCAAGG              ACGAAGGGTATCAAG  61 36
        cysJ NONE
        cysI 3597440 .. 3597452 -  -4.1  -4.15841   GGAGGAAAGGACAAA                TTCGC CAG GCAAA                TTATCCAATGCCCAA  61 150
ISU54_RS15930 3596232 .. 3596250 -  -7.4  -4.11216   TTTTCATCTTCAAAA             CCGTTGAA GGA TTCGACGG             TTATTTCCCCGATAT  71 379
ISU54_RS15915 3595226 .. 3595238 -  -4.1  -2.54504   AGTCGGCAAATAGAG                GTAGA TAG TCCAC                AACAGCCTTCGATTA  45 326
        cysD NONE
        cysN NONE
        cysC NONE
ISU54_RS15890 3590212 .. 3590222 -    -4  -3.56568   GAATCATCGGGTAAA                 TGAA GCG TTCA                 CCAACCCGTAAGCAG  52 23
        ftsB NONE
        ispD NONE
        ispF NONE
        truD NONE
        surE NONE
ISU54_RS15860 3585744 .. 3585758 -  -2.8  -3.60006   AACGATATGTCCAAA               TACCTT TAC ACGGTA               GTTAAAGGTGAAGGC  50 75
        nlpD NONE
        rpoS 3583520 .. 3583547 -  -7.1  -5.66684   CAAGGCATAAAAAAA        CGGTGAACA TTTATCTATC TGTTCACCG         TTGTTGTGTTTCATC 100 128
ISU54_RS15835 NONE
ISU54_RS15830 NONE
ISU54_RS15825 NONE
        dhaL 3574806 .. 3574824 -    -6   -4.4773   TGATATGAACGAAAA             CAGCTATA TGG TAGAGCTG             GGCTGGTTCACTCCT  73 446
ISU54_RS15775 3565213 .. 3565223 -  -2.6   -4.3208   CGGTATAAGGTAAAA                 TAAT GAG ATTA                 AGCCATTAGAATAAT  59 366
ISU54_RS15770 3563682 .. 3563703 - -11.5  -3.07994   CTGAATGCCATTCAA           GCCGCGCCA TCTC TGGCGCGGA            CGTTTTACTCTTCGG  84 266
ISU54_RS15710 3549530 .. 3549548 -  -5.2  -3.14587   TTCCAGAAAATGAGA             GTCACCCA GTG TGGATGGC             GCCCGAATAATTCAA  53 434
        dmsA NONE
        dmsB NONE
ISU54_RS15695 3545502 .. 3545528 - -15.3  -3.85092   ATGAGGCAGAGCAAA         GCTATTCTGGG CGCTC CCCAGAATAGC         CAAAGTGTCACCGCC 100 50
        dmsD 3544311 .. 3544321 -  -4.6  -3.88498   GGCGGATACATTAAA                 GGCG TAT CACC                 TATTGCTGGCCAATA  59 401
ISU54_RS15670 3539535 .. 3539554 -   -15  -2.72043   AATGCCTCCTGAAAG            GAGGGGCG ATGT CGCCCCTC             ATTACGGCTAAAGCG 100 83
ISU54_RS15665 NONE
ISU54_RS15660 NONE
ISU54_RS15655 3536052 .. 3536064 -  -3.4  -4.42962   GAGACTAAAAAAATA                GCTT TCATC AAGC                CTGTCCGGAGATCCC  63 198
ISU54_RS15650 NONE
ISU54_RS15645 NONE
ISU54_RS15640 NONE
ISU54_RS15635 3531089 .. 3531104 - -10.4   -3.0395   ACATATTGGTTAACA              GCCCCA GCCA TGGGGC               GGACACTTTACTCTT  76 205
        pncC 3527693 .. 3527712 -  -5.8  -2.72839   AATTACCGCTAATTA            TACTGTAC AATC ATACAGTA             TCAAGCCTATTTTTA  52 38
        recA 3526481 .. 3526512 - -18.2   -3.6682   TGTTATTTACTCAAA      CAAACAGACCGCCA CAAG TGACGGTCTGTTTG       TTTACTCCAACTGGT 100 53
        recX 3525805 .. 3525825 -  -2.6  -4.34263   TTGGAATAAGATAAA            TTTTCTTC AGAAG GAAGTAAA            ATCCCACGTGCATTC  59 39
        alaS 3523023 .. 3523049 - -11.6  -5.48054   AGGAAAATTAAAAAA         CGCCATACCTAG TAC CGAGATATGGCG         TGTTGATTTAATAGA 100 48
        csrA 3522598 .. 3522632 -   -15  -5.27206   TAGAGACAATAAAAA     GCAGTAGCGCCTCGTG TTA CACGAGACGCTGCTTC     AAAATCAGTAAGTCG 100 30
ISU54_RS15595 NONE
ISU54_RS15590 NONE
ISU54_RS15585 3521961 .. 3521971 -  -3.2  -3.93695   TGTATGACTTAGAAA                 GATG GTG CACC                 CAGGAAGATTCGAAC  56 17
ISU54_RS15580 3521781 .. 3521796 -  -8.2  -4.67635   GCCAAAAGCAGAAAA              CCCCGC TATA GCGAGG               TTCCTTAATATGGTG  91 36
ISU54_RS15575 3521609 .. 3521624 -  -8.2  -4.67635   GCCAAAAGCAGAAAA              CCCCGC TATA GCGAGG               TTCCTTAATATGGTG  91 36
        yqaB NONE
ISU54_RS15565 3520343 .. 3520354 -  -4.4  -2.65876   GAAAACCATAACTCA                TCAG CATA CTGA                 AACTGCATAGATGTG  45 64
        gshA NONE
        luxS 3517977 .. 3517995 -   -16  -3.07307   GAAAGCTTTACTGAA             CCCCCAGC CTA GCTGGGGG             TTTTCTGGGCACAAT 100 98
ISU54_RS15550 3517304 .. 3517328 -  -9.9  -4.44046   GTCAGTTTAAATAAA          TATCCTCCGGC ATA GCCGGAGGTTT          TTCATATGCGCCTAT 100 103
         ffh 3513394 .. 3513427 - -18.3  -4.67982   CTTTAGTTAATAAAA     CAACTGGACCCCATC GGGG AACGGGGTCCAGTTG      CAATATAAAAAGCCC 100 196
        rpsP 3513106 .. 3513117 -  -2.2  -3.78934   GCTTGCTCATAATAA                CCAC CACC GTGA                 CAGATTAAGCTGCTT  51 30
        rimM NONE
        trmD 3511717 .. 3511728 -  -4.4  -3.65902   CTTACCCTAGGTAAA                CTGA TATA TCAG                 GACCATTTGCGCGCG  54 70
        rplS 3511283 .. 3511303 - -12.6  -5.24129   TCTGGGCACAAAAAA            GGGCTAGC ACATG GCTAGCCC            CTTCATAAGTATTAA 100 67
ISU54_RS15510 3510558 .. 3510611 - -13.3  -5.63103   TGCCAACTAAAAAAA TAGAGCACAAATAAATATCCTCCGGC ATA GCCGGAGGTTTTTCATATGCGC-CTA TAAGGCTCTGTTACC 100 89
ISU54_RS15490 NONE
        tyrA 3504297 .. 3504325 - -13.2  -5.69473   CACACCATAAAAAAA        GTCATCCCGGCA GGCTG TGCTGGGATGAC        CTATAAAAATCTATC 100 56
ISU54_RS15460 3500294 .. 3500314 - -12.5  -3.76167   GAAGACGAATAAATA            TCCTCCGGC ATA GCCGGAGGT            TTTTCATATGCGCCT 100 105
        rluD NONE
        pgeF 3496681 .. 3496695 -  -5.7  -3.83998   CTACTGGAGATTAAA               TGAGG TCATC CCTCA               ATTTTTCAAGGTTAT  63 99
        clpB 3494033 .. 3494050 - -12.7  -5.80727   AAAAACAACAAAAAA             GGGGCGA TTTC TCGCCCC              TTAGAGGATCAGCTA 100 41
ISU54_RS15430 3491919 .. 3491942 -    -3  -3.81929   CAACAAGGTACTAAA          GCCCGACCAA TTTC TCAGCCCGGC           TTTATTTGCTCGTTA  53 90
ISU54_RS15425 NONE
ISU54_RS15420 3491646 .. 3491692 -  -3.9  -3.45839   ATTGTTAAAGAGCAA TATTTCACAACACACTG-TGCC TTGC GACCGCAGTACGTTTTGAAATA GTTTTATATGGTGGA  51 34
ISU54_RS15415 3488561 .. 3488571 -  -6.8  -4.27316   TCTCTCAATTCAAAA                 CACC TTC GGTG                 TTGTAAGGTTAAGCC  74 30
         rrf 3488313 .. 3488333 - -10.4   -4.8048   CGCGCACAGCAAAAA            CCCCACGC TTTGG GCATGGGG            TCTTGGCTTTATTTG 100 43
ISU54_RS15380 3480479 .. 3480535 - -13.8  -3.40775   ATTTTTAGCCAAATA GCGGTCAACAAAAAAGGGGGCCCTGA ACTCA TCAGCGCCCCCTTTTATTTTTACCGT TCTAAAACGTCTCTC 100 60
ISU54_RS15330 3470560 .. 3470576 -  -5.8  -3.78233   ATACGAAGATTGAAA              CGCACC ATTTA GGTGCA              TTAAAACGACTACTG  63 148
ISU54_RS15325 NONE
ISU54_RS15320 3468901 .. 3468915 -  -4.2   -2.8552   TCCCAGTCAGTAAAT               GTCATG AGG CATGGC               TCCCAAAGTATCGAC  46 12
ISU54_RS15315 NONE
ISU54_RS15310 3467522 .. 3467542 -  -3.9  -3.06418   CCTTTATATAAATCA            CCATCAGGC AGG GCCAGATAA            ACCGCGGACTGACGA  46 8
ISU54_RS15305 3466206 .. 3466221 -  -4.6  -4.37092   AGGGCCGTTATAAAA              CGACGC TTCA GCGTGG               AGTAATGGCCCCCCG  66 374
ISU54_RS15290 NONE
ISU54_RS15285 3462801 .. 3462811 -  -8.2   -4.8622   GGCGTCAAGTAAAAA                 GGGG GAT CCCC                 GACGTCATTGGCGTT 100 111
ISU54_RS15280 3461993 .. 3462029 -  -2.4  -5.66989   TAAACACTAAAAAAA   CCGTAAACTTA-GAC TAATTGCC GTCACAGGTTTACGG    CAAACAGCAATTTGA  82 506
ISU54_RS15275 3460006 .. 3460017 -  -2.2  -3.56262   TAAATCTGACAAATA                TGCC GATA AGCA                 CTAAAACATCTTATA  47 26
ISU54_RS15270 NONE
ISU54_RS15265 NONE
ISU54_RS15260 3451354 .. 3451379 - -11.9  -3.62723   TATCGAAATAATCAA         CCAAGCCTCCC ATTA AGGAGGCTTAG          TTTTATGTTTAATAA  93 132
        lpcA 3448000 .. 3448040 -  -4.8     -2.59   ATGTTCACAGAAGAT TGAGGTGATCAA-CTTGAT TAAT ACCGCGGTTGATCACCCCA  GCACATCAGGCTTTT  48 31
ISU54_RS15245 3446863 .. 3446880 -  -2.7  -4.72272   TTTGGTCAGGAAAAA             GTGGATA TCAG TATCTAC              CCCTTCCGTATGACA  66 215
ISU54_RS15235 NONE
ISU54_RS15230 NONE
ISU54_RS15225 NONE
ISU54_RS15220 NONE
        nqrE NONE
        nqrF NONE
ISU54_RS15205 NONE
        nqrM 3438533 .. 3438571 - -22.6   -3.2557   ACAATAATTGAGCAA   CAAAGCCCCCGAACAATG ATG CGTCGTTCGGGGGCTTTG   CTTGTCAGATAAAAA 100 154
        dinB 3435838 .. 3435859 -  -2.2  -5.00616   GGTTTGTTCAAAAAA           CCCTATCC TAACAT GGACATGG            TGTCGATTGGGCCAA  70 261
ISU54_RS15180 3431270 .. 3431290 -  -2.5  -2.57405   ACAGTAAGAACACAT            CACTAATCG TCT CTATCAGCG            GGTATTATTCTATAA  41 470
         gpt 3428243 .. 3428272 -  -9.3  -4.69326   ATACTGAAGAGAAAA       TGAAACGTCCGGC AGGC ACCGGACGCTTAA        AGAACAGTAAATTAT 100 37
        frsA NONE
         crl 3426363 .. 3426393 -  -9.1  -3.83205   AGGCTTGATACGAAA       TCACCCCCTTTAT TGTGC AGAAAGGGGGTAA       TGGGGACAGTTTATG  78 81
        proB NONE
        proA 3423789 .. 3423816 - -13.6  -5.78622   TGATTTGAAAAAAAA        GCGACAT-TGGCA AAT TGCCACATGTCGC        TTTACTAGCGATTTT 100 109
ISU54_RS15140 3422713 .. 3422723 -  -6.8  -2.52464   TGTCTTCTCAAGGTA                 GCCT CAG AGGC                 GCTCCCTGTGGGCTT  55 116
ISU54_RS15135 NONE
ISU54_RS15130 3421389 .. 3421399 -  -2.4  -3.18118   TCATTTCATAATAGA                 CGCC TAC GGAG                 AGATTATATGAAATA  43 221
ISU54_RS15125 3420116 .. 3420136 -  -3.2  -5.21709   TTCGACATCAAAAAA            CCGACC GTTATTATT GGCCGG            TTGAACAGGTTTACT  75 197
        aroL 3419435 .. 3419471 -    -4   -3.5394   AAACGCGTTTCCAAA   TAATTATGTAGGTGACA ATTG TAT-ACCTGCATAATTA    ATTAGCAATCAACCA  52 91
        ppnP 3418706 .. 3418736 - -11.9  -2.91086   AAAGGATAGATGATA       TGTCGCCCCCTCT GGCAT AGAGAGGGTGACA       GACTCGCTAACTCAA  86 49
         mak 3415984 .. 3416012 -  -5.9  -3.42069   TCAATTTGAACAACA        TTGATGCTAGCCC ACA GGGTAAGCCTCAA        GGATGAGGCTCATTA  59 379
        phoB 3409996 .. 3410006 -  -3.2  -3.65991   AGCGTTCTAACACAA                 CGAA TTC TCCG                 GCACTGAAAACTCAG  51 37
        phoR NONE
ISU54_RS15080 3407447 .. 3407459 -  -5.5  -3.19789   ATAGCCAACAGTTAA                CCGCT CAT AGCGA                GAATATCAGATAAAT  53 157
        brnQ 3405753 .. 3405773 - -11.1  -4.72272   TTTTTTCAGCAAAAA            GCCACGGAT ATT AACCGTGGC            TAAAAATACTCTATT 100 50
        proY 3404263 .. 3404289 -  -6.5  -5.85244   AATTAAAAGAAAAAA         GCCGGGACAGA TGAAC TGTACCCCGGC         TTTGTATCGATTATC 100 67
        malZ 3401869 .. 3401904 -  -4.7  -5.52986   ACTGGAGCAAAAAAA    CAGCTCAGTTATCAC TGAATT GTTATCCCTGAGCTG     CTCTAGTGAGTTATC  87 62
ISU54_RS15055 3400732 .. 3400742 -  -8.2  -3.07522   AGATGGTTGAACAGA                 GCCC TTG GGGC                 GCAGCGGAGTTGATT  67 389
        queA NONE
         tgt 3394716 .. 3394737 -  -2.9   -4.3898   ATCAGTGCGATAAAA           CAGCCGCGA CAAA TCGTAACTG            CTCTCTCTATAAATA  59 61
        yajC NONE
        secD NONE
        secF 3391415 .. 3391437 -   -15  -5.24129   TCTGGGCACAAAAAA           CCCTGAAACT AAC AGTTTCAGGG           CTATCTTATACATCG 100 60
ISU54_RS15010 3390701 .. 3390733 - -11.3  -4.43501   AATTTACTGATAAAA      TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA      TATGCGCCTATAAGG 100 99
ISU54_RS15005 NONE
ISU54_RS15000 3389182 .. 3389193 -  -3.6  -4.36554   TACGATGACAACAAA                GGCC GATC AGCC                 ATCGAATGTGTGCTT  63 20
        nrdR 3388586 .. 3388596 -  -5.4   -3.0634   AATTTGAGGTTAAGA                 CTCA ATT TGAG                 GTTAAGACATAGATA  52 97
        ribD 3387359 .. 3387372 -  -2.3  -4.11216   TGCGCATTTGTAAAA               CGCCT GACA AGGCC                GTGATTAGCAGGGGA  55 62
        ribE NONE
        nusB 3386156 .. 3386186 -   -20  -2.95091   ATGTTAACTGATATA       TAAATTAAGGCCGG ATA CCGGCCTTAATTTA       TATCGTTAATGTATA 100 205
        thiL NONE
        pgpA 3384557 .. 3384575 -   -16  -3.07307   GAAAGCTTTACTGAA             CCCCCAGC CTA GCTGGGGG             TTTTCTGGGCACAAT 100 108
ISU54_RS14965 NONE
ISU54_RS14960 3382516 .. 3382537 -  -5.2  -3.01791   ATTTCTTGTTGAACA           TTTGCAGT TGCCAG ACCGCAAA            CTGTTTTAACAAATC  52 142
ISU54_RS14955 3381921 .. 3381953 - -11.3  -4.13973   AGATATCAGAAACAA      TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA      TATGCGCCTATAAGG 100 99
        thiI 3376736 .. 3376765 -  -7.9  -4.19974   AAAAGGCGGAAGAAA       TTGCCTGGCAGCTA GTG TTGCCGCCAGG-AA       TTTATAATTATCGGG  76 113
ISU54_RS14920 3374504 .. 3374533 -  -8.5  -3.44622   TAGGGCCAGAATTAA       GGGGCAAAGACAT GAAA AAGCCGTTGCCCC        TTTAGTCGTTATACC  71 90
        bolA 3363473 .. 3363498 - -10.5  -4.12532   TCGCCTATACAGAAA         CACAAACGGCC CTAG AGCCGTTTGTA          AAATTCTCATCTACT  91 92
         tig 3361764 .. 3361789 - -11.1  -5.50723   TTACCAAAAGAAAAA         GCCCGTGACCA ATAA TGGCGACGGGC          TTAATCAATCAAAAT 100 80
        clpP 3360633 .. 3360647 -    -5  -2.62396   TATTTCTGGACATCA               CGTTAA CGT TCAACG               GATAGCCGATATACC  48 137
        clpX 3359230 .. 3359248 - -13.2  -4.91852   GCGAGGAAAAAGAAA             TGGGGGAT AAA ATCCCCCA             TTGTCATACTAACTG 100 59
         lon 3356672 .. 3356699 -  -6.3  -4.25873   GCGGCACAAAAAATA        GCTGGCAAGCA GGATTT CACTTACCAGC         ATTAGTTTTATCAAT  72 59
        hupB 3356139 .. 3356158 -   -10  -5.86332   CTAAGCGAAAAAAAA            GCGCATCA TAAA CGATGCGC             CTTGTATCTTACCTT 100 110
        ppiD 3354002 .. 3354017 - -10.4  -3.66139   CACAGATATGCGAAA              GGTCGC CAAA GCGACC               TTTCTTTTATTACAT  82 64
ISU54_RS14835 3353306 .. 3353349 -  -8.8  -4.08945   ATTATGTTGGTAAAA GCCGCCAGACCAATACCTACC GAT GGCCAGCACC-GCCTGGCGGC TTGATTTACCAACTT  83 146
ISU54_RS14830 3352630 .. 3352655 -  -6.2  -2.99471   TTAGCCTGATATATA         GCGGCC-TATC TATAT AATATGGCCGC         AACACACGCTCTCAA  56 79
         cof 3348996 .. 3349011 -  -6.1   -5.8187   TACGGAAGAAAAAAA              CCGGA TGGTTC TCCGG               CTGGCTAATAGCTAT 100 45
ISU54_RS14805 NONE
ISU54_RS14800 NONE
ISU54_RS14795 3343478 .. 3343499 - -13.7  -4.22554   TGAGTCAATAAATAA           CGTGGGGCG ACAT CACCCCACG            CGTGCTGCTTAACTC 100 34
        glnK NONE
        amtB 3341227 .. 3341262 - -12.6  -4.01419   GATGAATCAATGAAA    TAGCACAGGGGCGATG TCAC CATCGCCCCTGTAGTT     CATCATTATTATGTA 100 194
ISU54_RS14775 3339490 .. 3339500 -  -8.2  -2.80935   ACGCCAGTTATTAGA                 GCGG GAT CCGC                 GGCAACGTCAAATAA  64 58
         ffs 3338515 .. 3338526 -    -3  -5.27335   TGCCGGAAATAAAAA                TCTA CTGA TAGA                 GAGCGTTCACGACAA  79 161
        acrR NONE
ISU54_RS14720 3329724 .. 3329755 -  -4.5  -3.69684   AAATGGATCGAATAA      CGCAATTCGTGCTC TTGAT GA-CACGAATAACG      ATAAAGAGGGTGAAG  57 256
        mscK 3326108 .. 3326128 -  -3.2  -3.29541   AGCATTACCACAACA            CCAGCCCT TTCGC AGCACTGG            TTCTCTAACAACCGT  47 225
ISU54_RS14700 3324474 .. 3324484 -  -4.6  -3.70853   TTAAGGACGTAACAA                 GGGA TAA CCCC                 CGCGCACGAAACACT  57 86
         apt 3323579 .. 3323593 -  -5.7  -4.58424   TATGACGATATAAAA               CCAGA GTTTG TCTGG               CTGGAATACCTTAAC  75 175
        dnaX 3321076 .. 3321109 -  -8.9  -2.75844   TCTCTCATCGCAAAG     GGCTGCG-TCAGTGCA CCA TGCACTTATCGCAGCG     GTTAAATTGGTCGGA  67 27
ISU54_RS14685 3320730 .. 3320743 -  -2.3  -2.64099   GGTTTGCATCAGAAC               GGCAT CTTA AAGCC                TGGTGGCAATTGCAT  40 5
        recR 3320066 .. 3320080 -  -3.6  -4.64676   TTATTCTGAATAAAA               TTATCC GTA AGATAA               TCAATAATAAGGTCA  67 63
        htpG 3318011 .. 3318039 -  -6.8  -5.56673   AGGTACAATAAAAAA       CACCCTTG-GCAA TACG TTGAACAAGGGTG        TTTTTTTATCGATTA  91 38
         adk 3317135 .. 3317165 -   -17  -3.59979   CCTTCTTACTTGAAA       TAGCTAAGGCGGCC TTA AACCGCCTTAGCTA       TAAGGCCATCCAGAA 100 41
        hemH 3315865 .. 3315876 -    -3  -3.58343   CGGAGCATTCCGAAA                TTAC AGAT GTAA                 GTTAAGTTAAGCACC  51 278
ISU54_RS14660 NONE
        rfbF NONE
        rfbG NONE
        rfbH 3311296 .. 3311311 -    -9  -5.58454   TTCATATTAAAAAAA              GAGGCA GTGT TGCCTC               CTTGCTCCTGTTAAA 100 36
ISU54_RS14640 NONE
ISU54_RS14635 NONE
ISU54_RS14630 3307720 .. 3307731 -  -2.2  -3.87075   ATTACTTTTCATAAA                GGTA TTAT CACC                 TATCCTCTATATTAT  51 21
ISU54_RS14625 3306994 .. 3307012 -  -6.2  -3.57263   ATCCTCATTCTTAAA             TTATAATT TTT AATTATAA             AATCTGAAATAACAT  61 16
ISU54_RS14620 3305101 .. 3305119 -    -6  -4.63863   GTAATAGAAAAAGAA             TATAGCAC TGG GTGCTGTA             ATAGAAAATATGGGA  75 387
ISU54_RS14610 3302768 .. 3302780 -  -6.3  -3.72695   ATTTCCTGGACCAAA                CGAAT TAA ATTCG                ACGTGTCAGTCAAGT  63 246
ISU54_RS14600 3300775 .. 3300795 -  -4.1  -2.55508   GAAACCCGATAATAT            TTTTTACTT ATT AAGTTAAAA            CTTAATTAACCAACT  45 122
ISU54_RS14595 NONE
ISU54_RS14590 NONE
        cpsG NONE
        fepE 3295906 .. 3295933 -   -12  -4.02581   GGTGATAAAACAGAA        CGGCCAGATGAG AAAC CTCACCCAGCCG         TTAGATAAATTCGTT 100 47
ISU54_RS14575 3294393 .. 3294427 - -13.6  -5.06816   ACTCTGTAATAAAAA     CAATCAGGGCCAGCTT ACT ATGCTGGCCCTGACTT     ATATCCCGCGTCTAC 100 45
        cueR 3282950 .. 3282995 - -13.5  -3.80114   CAGCAAGGCAGTAAA CAAACAGCCCGAATCACTTAC TCTG GTAGGTGATTCGGGTTATTTA TCACGGCAGCGTATT 100 39
ISU54_RS14505 NONE
ISU54_RS14500 3275475 .. 3275499 -  -9.9  -4.04491   AAGTTATAACAAGAA          GCGGGCGGC CTCTGCT GCTGCCCGC          GAATAAAATCCACTA  86 38
        cysS 3270568 .. 3270598 - -11.3  -5.60993   CTGGGCACAAAAAAA      TCGCGGTTACTGGT AAAC ACCAG-AACCGCAA       TTTTTTTAGTACTAT 100 191
ISU54_RS14470 3269857 .. 3269881 -  -9.9  -4.46854   CTATTGAACAATAAA          TATCCTCCGGC ATA GCCGGAGGTTT          TTCATATGCGCCTAT 100 103
ISU54_RS14455 3268352 .. 3268375 -  -3.1  -2.73159   GGAATGGGTTCAAAG          CAAGAAGTG CTAAAT CACTACCTG           ACCCGTCTAAATGGC  42 78
ISU54_RS14425 3265734 .. 3265745 -  -5.8  -2.53015   ACATGGCTGAACGGA                GGTG ATAA CACC                 GCGCAATATACGGGG  52 139
ISU54_RS14420 NONE
ISU54_RS14415 NONE
ISU54_RS14410 NONE
ISU54_RS14405 NONE
ISU54_RS14400 NONE
ISU54_RS14395 3259846 .. 3259861 -  -3.2  -3.33696   GGCTCGCCTAATCAA              CCAACG TTAA CGTCAG               ATAAAGCACGGAACT  47 2
ISU54_RS14390 3259237 .. 3259254 -  -7.7  -4.61231   TTAGACCCCCAAAAA             CGGGAAGC CCT GCT-CCCG             GTATTCGATTTCAGC  86 207
ISU54_RS14375 3256050 .. 3256072 -  -6.2  -4.82901   TTGTTGGCACAAAAA           CCTTGGATTG TGC CAATCCCCGG           AACCACAAAACTGCA  78 234
ISU54_RS14360 3252001 .. 3252017 -  -2.1  -4.76041   CAGACGTATGAAAAA              GCGGCCA CGA TCGTCGC              CCGTTTTATCGGTGA  68 267
ISU54_RS14340 3245033 .. 3245046 -  -3.1   -4.4078   CGCTGTTAATGAAAA               CGTTG TCGC CAACA                CGCAGAACTCGCAAC  61 229
ISU54_RS14315 NONE
ISU54_RS14310 NONE
ISU54_RS14305 3239707 .. 3239733 -  -4.5   -3.2672   AGGTGAATAATAAAC         TGGCTAATACA TTCGC TATGTTAGCCA         TGCTGGGTGTTGTGA  50 174
ISU54_RS14285 3237001 .. 3237027 -  -8.1  -5.16237   AAGGGGATCAAAAAA        GCCCCAC-A-GGT CAC ACCATTGTGGGGC        AGCAATCTCGCGTTT  95 66
ISU54_RS14275 3233733 .. 3233765 - -11.3  -4.69464   AAAATAGCTGAAAAA      TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA      TATGCGCCTATAAGG 100 99
ISU54_RS14255 NONE
        iolD 3221098 .. 3221115 -    -7  -2.95298   GGGATCCACCACAGA             CCAGAG GGTGGT CTCTGG              GTGGGCGGCAATATT  58 388
ISU54_RS14240 NONE
ISU54_RS14235 NONE
ISU54_RS14230 3216531 .. 3216541 -  -2.4  -2.83409   CATGAACGTATTACA                 GCGC GCC GCGA                 CGGTTCTTGGCGTAG  41 10
ISU54_RS14225 NONE
        iolC NONE
        iolE NONE
        iolB 3211385 .. 3211396 -    -3  -5.24551   TCAAACGAATAAAAA                CAAA GAAA TTTG                 GTTATTTACAATGAA  75 98
ISU54_RS14200 3208878 .. 3208888 -    -4  -4.07877   CCACTGTATAAAGAA                 TTAG TGG CTAA                 AACAAAATTGGAAGC  59 246
ISU54_RS14190 3208082 .. 3208135 -  -5.4  -2.74605   TGGTTTTAAAATTGA TAAGCCACCAG-ATGAAATGA-CCAC GATA GAGGTTCACATCACGCAGGTGGCTTA TTTAATATCAGTGTA  50 59
ISU54_RS14175 3205378 .. 3205394 -  -3.7  -4.22652   CCATACCACTGAAAA              TGCTGTC GAT AACAACA              TTCCAAAATGTGACA  61 413
        cspE 3204467 .. 3204484 - -10.5  -5.28176   GCTACCCATAAAAAA             CCCGCCC AGTA AGGCGGG              TTTTTAAAGATATGG 100 46
        tatA 3202766 .. 3202786 -  -9.7   -5.1675   GCAGCCACCAAAAAA            CGGATTTCC ATT GGAGATCCG            TTTTTTTTATCAGCC 100 114
ISU54_RS14085 3187258 .. 3187268 -  -8.2  -2.87319   GGTAACCCACGAAAT                 GGGC TTC GCCC                 GCAAAGTGGCTAACC  60 287
        ubiF 3175931 .. 3175955 - -16.5  -2.73364   CCGTCAGCGGAATGA          TGAGCCCGGCA GAA TACCGGGCTCA          GGCAGAAAGGCAGTA 100 203
ISU54_RS13975 3166064 .. 3166087 - -15.4  -5.60993   CTGGGCACAAAAAAA          CGGGAAGAGA TCGC TCTCTTCCCG           TTGGTTCGATTAAAA 100 116
ISU54_RS13970 3165346 .. 3165385 -  -9.4  -4.88918   TTACGGCAAACAAAA  CA-ATAAATATCCTCCGGC ATA GCCGGAGGTTTTTCATATG  CGCCTATAAGGCTCT 100 95
        glnS 3163544 .. 3163563 - -10.7  -5.43414   ATCAGAGACAAAAAA            GGCGTGG ACTGTG CCACGCC             AATTGAATCTGAGCG 100 48
ISU54_RS13960 3160941 .. 3160963 -  -4.8  -2.56449   ACCTTATTACAAGAT           GCCCAATCAG CAC CCAATTTGGC           GCAATCAACGCCATT  47 521
ISU54_RS13930 3153888 .. 3153901 -  -9.5    -3.737   CAACCTTCTACGAAA               GGGGC GTTC GCCCC                AATAGTTAATCAAGA  78 45
ISU54_RS13855 3140896 .. 3140915 -  -9.3  -5.63504   AAGCTTATAAAAAAA            CACCCAC AATTAA GTGGGTG             ATTGGGATTAACCTG 100 65
ISU54_RS13850 3139709 .. 3139727 -  -2.4  -5.10933   CTACTGAAAATAAAA             CCGATTTA TAT TGAATCGA             TGTTGCAAGAGATGG  74 440
        cspA 3138309 .. 3138326 -  -9.1  -6.25741   AAATAATAAAAAAAA             CCCCGTC AAAA GACGAGG              CTTCTAAATCTATTT 100 71
ISU54_RS13830 NONE
ISU54_RS13825 NONE
ISU54_RS13820 NONE
ISU54_RS13815 NONE
ISU54_RS13810 3132384 .. 3132397 -  -3.9  -4.57275   CAAAAAAACGTAAAA               TCTTA TGGA TAAGA                TGGCTAACGGCAAGA  65 395
ISU54_RS13805 NONE
ISU54_RS13800 NONE
ISU54_RS13795 3128888 .. 3128902 -    -2  -3.61536   AACTGAATGCTGAAA               CCGGGT AGT ACCCTA               CTTACTTTGAGTATT  49 95
        ureE NONE
ISU54_RS13785 NONE
        ureG NONE
         yut 3124313 .. 3124325 -  -2.7  -2.59668   TAACATGTTCAGAAC                CAAGA ATG TCTTA                AATTTAATCGCTACT  41 36
ISU54_RS13765 3123012 .. 3123045 - -15.5  -5.77853   AACCTGTAAAAAAAA     GACACTCATTAAGCG TTAT CGGTTAATGAGTGTC      TCTATTTGTTAGCCT 100 109
         kch 3120777 .. 3120798 -    -8  -5.93809   TCGTGACAAAAAAAA           CACCCTCA CTTAAC CGAGGGTG            TTTTGATATAAACAC 100 65
ISU54_RS13735 NONE
        chbC 3117157 .. 3117168 -  -4.4  -3.43676   CGGACCAATCCATAA                CGAT TTTT ATCG                 GCCTTGAGCCAAAAC  52 67
        chbA 3116680 .. 3116694 -  -2.7  -2.85216   TACCATTGAGAATTA               TCGCC CCGTC GGCGT               ATCACTGAATTTTTT  42 27
        chbR NONE
        chbG 3114760 .. 3114779 -  -7.8  -3.40403   CCTCTTGTAGGATAA            TGCCCCTA AAAA TGGGGGCA             TTATCTGTGATGTCT  66 250
        seqA 3113265 .. 3113300 -  -7.6  -2.88861   CACTACTCCTATACA    CGTCCTCAG-CAAGGGC GTT GCCATTGGCTGAGAAAG    AGGATGGTTTCAATG  61 44
         pgm 3111525 .. 3111548 - -11.8  -5.53079   AAAACACATAAAAAA          TCCGGCAACAG AGC CTGT-GCCGGA          TTGATCGAGTGCCAA 100 80
ISU54_RS13695 3110528 .. 3110554 -  -7.2   -3.0814   ATTTAGATGCTAATA         CCGCCACCGC TGTACGG GCGGTGGTGA         TGGCGCTATTTTTAG  59 458
ISU54_RS13650 3101239 .. 3101263 - -12.1  -5.16237   AAGCGCATTAAAAAA          GCCCGTGGGCA TGA TACTCACGGGC          CAGCTATTTTTTGTA 100 77
ISU54_RS13645 NONE
        phrB NONE
ISU54_RS13635 NONE
ISU54_RS13630 3096945 .. 3096965 - -13.3   -2.9518   TGTAAGACGGAGACA            CGCCGATGC TAA ACATCGGCG            AAAATAGCCCTATCC 100 47
ISU54_RS13615 NONE
        pxpA 3093993 .. 3094009 -  -2.4  -2.51849   CAATAATGTAAAACG              TATTTA AGTGA TAAATA              TATTCTGCCCGAGGT  39 50
ISU54_RS13605 3092964 .. 3092982 -  -2.3  -3.81951   CTTGACACCACCAAA             CCCGGCA ATCAA TGCCATG             ACCACCACGACCAGA  51 261
         pcp 3091155 .. 3091169 -  -9.2  -3.32844   GTCCTGACGGTAGAA               GCGGGC AAA GCCCAC               TCTCATGCTAACCTT  67 401
        grcA 3089970 .. 3089985 - -10.4   -5.1675   TCAGGCATGAAAAAA              GGGGAC CGAA GTCCCC               TATCACTTTATGATT 100 74
ISU54_RS13580 NONE
ISU54_RS13575 3088005 .. 3088016 -  -2.2  -4.71222   ACACCAAAAGCAAAA                CCTG ATAC CAAG                 AGTGCTGGTTAGTGA  63 168
ISU54_RS13565 3085528 .. 3085554 - -10.1  -3.82218   AGGCAGAGGAGTAAA        GCGTCCGCGCCA AGGA TGGCGCGG-CTC         GAGCCTACATAGATG  84 176
        rpoE NONE
        rseA NONE
        rseB NONE
        rseC 3080916 .. 3080931 -  -3.4  -3.35073   ATCATGCCTAATCAA              TAATAA CGTC TTATTA               TTACTGAATACGCAT  47 26
        lepA 3077737 .. 3077749 -  -3.4  -4.16205   CAGAATCAAAGCAAA                CATG TTAGC CATG                AAAACTCCTTATTTA  58 34
        lepB 3076474 .. 3076486 -  -2.7   -3.3352   CAAAAGTAACCAAGA                CAAAA CTG TTTCG                TTTGCAGTGGCTCCC  46 289
         rnc NONE
         era NONE
        recO 3073984 .. 3073995 -  -2.2  -3.80452   AAAGCATACCAATAA                CCAC GTCA GTGA                 TTTTCAGTTTACACC  51 105
        pdxJ 3073181 .. 3073192 -  -3.6  -3.40611   CCTAGCCCAAGAATA                GCCA TTAA CGGC                 GCGCTTCCCGCATCA  51 18
ISU54_RS13500 3072716 .. 3072734 -   -16  -3.07307   GAAAGCTTTACTGAA             CCCCCAGC CTA GCTGGGGG             TTTTCTGGGCACAAA 100 96
ISU54_RS13495 3072045 .. 3072065 - -12.5  -3.70709   AGTATGCAATAAATA            TCCTCCGGC ATA GCCGGAGGT            TTTTCATATGCGCCT 100 105
        murQ NONE
        yfhb NONE
        tadA 3067993 .. 3068021 - -14.5  -2.51133   GATTTAGTCACCAAC        CGCCGCCCGTCAT AAC ATGCTGGGCGGCG        CATCACCTGGCCACC 100 42
        purL 3062041 .. 3062063 - -11.4  -3.60597   ATAAATTGATAAAGA           GAAGGGTATC TTC AATACCCTTC           AGACTGCTGACAAAC  90 225
ISU54_RS13440 NONE
ISU54_RS13435 3058599 .. 3058631 - -11.3  -5.00196   GTTGAAATAACAAAA      TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA      TATGCGCCTATAAGG 100 99
ISU54_RS13430 NONE
        qseG NONE
        glrR 3054581 .. 3054597 -  -3.6  -3.09823   TCTTTCAAAACCACA              GGGGCA TTGGC TGGCCC              ATCACGGGCCCCGCC  48 105
ISU54_RS13415 NONE
        glnB 3052478 .. 3052503 -  -6.2  -5.50499   TTATATGTAAAAAAA         CCCGCATCGTT TTGGC AACGA-ACGGG         CTTTTGTTATTCAGC  91 64
ISU54_RS13400 NONE
ISU54_RS13395 3049402 .. 3049433 -  -9.4  -2.51173   ATGAAGCTCATTAAT      CCCCGGTCACTTAA ATAA CTCAGTGACTGGGG       GTGAGCAAGGGCAGC  68 330
ISU54_RS13380 3046031 .. 3046052 - -11.5  -3.86202   CCCGATGAGATCAAA           GCCCCGGCC AGGA GGCCAGGAC            GGTGACAGCCGCCTT  95 39
ISU54_RS13375 NONE
         ail 3045038 .. 3045052 -   -10  -3.67976   GTCAGCAATTTGAAA               CCACCA TTA TGGTGG               GTTTTCATGGTTAGG  80 47
ISU54_RS13365 3043480 .. 3043505 - -16.3  -3.33815   ATGTTTTGCAATCAA         CTGAATCAGCG CCGC CGCTGATTCAG          ATATCATTTCCGTTA 100 85
ISU54_RS13355 NONE
ISU54_RS13350 3040280 .. 3040303 - -10.3  -4.96848   CGTTTCAGATAAAAA          GCCAGTCAG GGTTAG CCGACTGGC           TTTTTTTATTGGGAA 100 70
        trmJ 3038406 .. 3038429 -  -2.4   -3.7108   AGTCTCATAGCTAAA          GTTACCTGTT GGTG AACACGAAAC           AGAATTTTGACATTC  49 150
        iscR 3037899 .. 3037916 -  -2.7  -2.76009   TAAAATTCCGCAAAT             TCTGC TTATGCGC GCAGA              TTGACGTTAATCGTC  42 13
ISU54_RS13330 NONE
        iscU 3035942 .. 3035955 -  -3.1  -3.93398   ATCGACATACAACAA               CCTCA ACTC TGAGA                ACCAGCTCATATCCC  56 274
        iscA 3035496 .. 3035513 -  -4.1  -4.28369   AATAACGTAAAATAA             TCCATAG CATG CTCTGGA              AGTTGTTGTAATGGC  63 123
        hscB 3034855 .. 3034869 -  -2.1  -3.72588   CAAGCCACATTCAAA               TCAGT TCTCG ACCGA               TTTGTCATTTGCTTG  49 132
        hscA NONE
         fdx NONE
        iscX 3032205 .. 3032220 -  -8.2  -5.49234   ATACGCAATAAAAAA              GGCCGC TTGC GCGACC               CAGTCAGTATTCACT 100 36
        pepB 3030745 .. 3030771 - -10.1  -3.42459   CATCGAGAAGATGAA         CGAAGGGACGC CAAAT GCGCCCCTTTG         AGTCTTCTCAATTCA  78 47
        sseB 3029619 .. 3029630 -    -3  -3.58329   TAAAGACGCCGTAAA                TACA TCCA TGTA                 GGCTCGAGCCGCGCC  51 156
ISU54_RS13285 3029128 .. 3029152 -  -9.3  -2.53015   ATACGTGGCAATTGA          GCGCCTTTAGC TCG GGTAAAAGCGC          GGTCAAACTGTCTAA  68 375
ISU54_RS13265 NONE
         ndk 3017150 .. 3017189 - -13.6  -4.11906   AGAATGTATAAATAA  TAGAACGCCCCAGCAGAG CTGT CTCTACTGGGGCGTGGCA   TTGTACAAATTTTAA 100 152
   trmG/rlmN 3015740 .. 3015750 -  -3.2  -2.90061   ATATGCAGATAAGTA                 CCAA ATT CTGG                 CGCTCATGGTATTCT  43 133
        pilW NONE
        rodZ NONE
        ispG 3012661 .. 3012673 -  -2.7  -2.97747   CACAATATAAAACAC                TATCG GCA CAATA                TAAAACACGGTCACA  43 91
        hisS NONE
ISU54_RS13230 NONE
        bamB 3009347 .. 3009369 - -13.4  -4.27117   TTTTTAGAATACAAA           CGGCCCCTGA GTC CCAGGAGCCG           TTTTTGAGGTACTGG 100 70
         der 3007634 .. 3007660 - -10.1   -3.9749   AGGCAGAAGAGTAAA        GTGTCCGCGCCA GAGA TGGCGCGG-CTC         AAGCTCCCAAGGAAG  86 144
ISU54_RS13215 NONE
ISU54_RS13210 3005922 .. 3005935 -  -5.2  -2.99649   ACAGCGTGACACAGA               CGCC AGCAGG GGCG                TTATTGAAGACCACC  49 293
        guaB 3003015 .. 3003045 -  -9.9  -5.79595   TTTTAAAATAAAAAA       TAACCATCTGATG GCCAG CACCAGATGATTA       TTTAACTAATTGTTA 100 38
        guaA 3001079 .. 3001098 -  -7.8  -5.55769   GGGCACAACAAAAAA            CCGCCTAA TATT TAAGGCGG             TTTCAGACTGCTGGC 100 228
ISU54_RS13190 3000362 .. 3000394 - -11.3   -5.1286   TAAAAACCATAAAAA      TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA      TATGCGCCTATAAGG 100 99
ISU54_RS13160 2996110 .. 2996126 -  -6.7  -2.91457   ATAGATAAAAATTCA              TTTCTTA CAG TAAGAAA              CACACCTGACAATAG  54 462
        thiD 2994152 .. 2994166 -  -4.3  -3.59979   TCCCTGCAGTGCAAA               TTTCC TGGCG GGAAA               ATGATAAAGATATCG  54 284
ISU54_RS13130 2992634 .. 2992670 -  -9.3   -3.8721   CAGAGTAAATAAACA    GCGGAGCACGGCGAGAA CCG CCCTTGTCTTGCTCCGC    CATTGGCGATTCGGG  81 90
ISU54_RS13070 2972818 .. 2972840 -  -3.4  -2.62515   AACGTTTCGAGATCA           GTGAGATAAA ACC TTTAGCTCGC           CAGTAGGCGGGTAAG  42 17
ISU54_RS13065 NONE
ISU54_RS13060 2970425 .. 2970436 -  -4.4  -3.58209   ATGAACGGATAAACA                CATC AATA GATG                 AACTAATGAATCGCG  54 28
ISU54_RS13055 2969009 .. 2969030 -  -8.7  -2.90992   AATTGGGCCAAATCA           TCAGCCAGC AACA ACTGGCCGA            AGCGATTAGTCCACC  68 524
ISU54_RS13025 NONE
        pstA NONE
        pstB NONE
         upp 2952096 .. 2952113 -  -8.4  -5.24129   TCTGGGCACAAAAAA             GCCGAC TTTCAC GTCGGC              TATCATCGTTATTTA 100 34
ISU54_RS12985 2951388 .. 2951408 - -12.5   -3.6761   TTTGGTGAATAAATA            TCCTCCGGC ATA GCCGGAGGT            TTTTCATATGCGCCT 100 105
         hda 2950406 .. 2950418 -  -6.3  -2.65091   ACCGTAACCGATAAC                CCAAT GTC ATTGG                CATGAGTCAGCAAAC  54 200
ISU54_RS12965 2946998 .. 2947019 -  -6.5  -3.62096   TTCTATGAGTTCAAA           GTCCCGACC AAGA AGCCAGGAC            TTTGTTATCAACGTA  63 45
ISU54_RS12960 2945562 .. 2945591 -  -2.1  -4.30704   AATATAAAATAATAA       GATTCAG-CTGCCC TTG GGGCAGACCTAATA       TCTTTGTCTGTATAC  58 178
        dapA NONE
        bamC 2941851 .. 2941869 -   -16  -3.07307   GAAAGCTTTACTGAA             CCCCCAGC CTA GCTGGGGG             TTTTCTGGGCACAAT 100 69
ISU54_RS12935 2941178 .. 2941202 -  -9.9  -4.49556   TCGTCATGAAATAAA          TATCCTCCGGC ATA GCCGGAGGTTT          TTCATATGCGCCTAT 100 103
        purC 2940218 .. 2940244 -  -8.1  -2.88861   CACGACTCCCAGACA         GATTTTCTACG CGTAT CGTAGGAAATC         GATAGATCGAATACC  61 200
ISU54_RS12925 2939266 .. 2939288 -  -4.9  -3.35813   CTGTATTGCAATCAA          TG-TCGGCAC AAGC GTGCCAATCA           GAGAAGAATAGATCT  53 71
ISU54_RS12920 NONE
ISU54_RS12915 2936350 .. 2936370 -  -3.2    -3.889   GGGAATGATATTAAA            CGGCATTA AAGAG TTACGCCG            TCTTGATCATAAGCG  54 342
ISU54_RS12885 2931944 .. 2931975 -  -9.4  -3.75517   AGCCGATAAAACCAA      GGACTGCGCATGCCC ATA AGGCAAGCGCA-CCC      AGATAAAGCCACTAT  81 37
ISU54_RS12880 2930135 .. 2930146 -    -3  -3.13908   AATTCAATCATGTAA                TTTG ACTC CAAA                 ACGTAGTGCAATACC  46 2
ISU54_RS12875 NONE
ISU54_RS12870 2928825 .. 2928836 -  -2.2  -5.10497   AAGCCACTGAAAAAA                CACA ATGA TGCG                 ATATTAAACGGTGAG  71 29
ISU54_RS12865 2926875 .. 2926899 - -10.7  -3.05993   TCATGGAGATAGACA          GACGGCAAGAA AAA TACTTGCCGCC          TTTGGCGGCTTAATT  79 35
ISU54_RS12860 2925427 .. 2925438 -  -4.4  -4.70659   CCTGAGACTGAAAAA                CTGA TTCA TCAG                 AAACCGTTAGCGCTG  68 263
ISU54_RS12840 2919428 .. 2919448 -  -2.6  -5.79595   TTGGAAAATAAAAAA            TACTGACA TCCGT TGTCACTA            TTTAATGGCCGCTAA  86 23
        napF NONE
        napD 2916785 .. 2916798 -  -8.1  -3.08813   CCGGAGCCGAACATA               CCGAC CGCG GTCGG                GCCTTTCTCTTTTAG  63 439
        napB 2914185 .. 2914197 -  -9.1  -3.76224   CGGTTACTGACCAAA                GCCAG GTG CTGGC                TGGAAGCTATTACCA  78 1
        napC 2913444 .. 2913472 - -12.4  -4.72272   CTGCTGCAGTAAAAA        CGCCCTGCCGAC GCAAA GTCCACAGGGCG        TTAATCATCACTCTC 100 99
        nudK 2912770 .. 2912782 -  -2.6  -3.07291   AATGAGCGCAGCTAA                CACC GCTGT GGCG                TCAAGGACGAAGGGA  44 9
        maeB 2909885 .. 2909898 -  -5.3  -5.40072   GCGGGTGGAAAAAAA               TGATC TGGT GATCA                CCGCAGATATCCCAC  91 418
ISU54_RS12785 2907662 .. 2907691 -  -4.2  -2.77503   ATAACTACCCAATGA       CCAGGCCCATAC TCCGAT GTCTGGGGCTGA        TAATTTCCTGTATCG  46 379
ISU54_RS12780 2907081 .. 2907110 -  -7.8   -2.7012   GAACATACCAGATGA       GTGGTTTCCCGC GATAAT GCGGGAGACCAT        TTTTTTGCTCAATAG  60 71
ISU54_RS12765 2902868 .. 2902884 -  -9.4   -3.4758   TAGGAATAATATTAA              GGCGCT GAGGT AGCGCC              CAAGTGATAATAGCA  76 56
ISU54_RS12760 2901778 .. 2901800 - -13.5  -4.18044   TGATAAATAATGAAA           GGCCGGATT TCATC AATCCGGCC           AACGGTGATATATTT 100 63
ISU54_RS12740 NONE
ISU54_RS12735 2896992 .. 2897005 -  -9.5  -5.85737   AGATCAATAAAAAAA               CCCGG AAAA CCGGG                TAAAAAGGTCAAAAA 100 77
ISU54_RS12730 2895558 .. 2895570 -  -7.7  -4.23615   ATGACATTCAATAAA                GGAGT AAA ACTCC                ATTTGAGTGTATAAG  76 445
ISU54_RS12725 2893784 .. 2893805 - -12.3  -6.32017   AACAAATAAAAAAAA           GCCCGGT-CG TCG CGCACCGGGC           AAGAAAAACAGTTTA 100 73
ISU54_RS12720 NONE
        cysT NONE
        cysW NONE
        cysA 2889604 .. 2889635 -  -8.9  -3.14344   CACCGCTCTCATGAA     CCCGAATGA-CTGAC GCCT GTCAGCTCAT-CGGG      GTTTGCGCGTTAGCG  69 102
        cysM 2888531 .. 2888544 -  -3.9  -3.85864   TTATTATTATAATAA               CATTA TTAG TAATG                CATTTACTGCTAATT  56 144
ISU54_RS12695 2887135 .. 2887165 -  -5.7  -3.47349   GCCTCAAATTTATAA      TACTCAGAATAGAA ATTT TTCCATTCT-AGTA       GAAACGTATCGATTT  59 46
ISU54_RS12675 NONE
ISU54_RS12670 2880764 .. 2880776 -  -4.9  -2.71712   CTGGCTGCTTCAAAT                TCATT CAT AATGA                TTAGCGATGGAATTT  48 41
ISU54_RS12665 NONE
ISU54_RS12660 NONE
ISU54_RS12655 2877929 .. 2877942 -  -2.3  -2.65264   TTATCACTCAGATTA               GGACG GCCA CTTCC                AGTTTGAAAATGGCC  40 50
ISU54_RS12650 NONE
ISU54_RS12635 NONE
ISU54_RS12630 2870396 .. 2870413 -  -9.8  -5.60993   CTGGGCACAAAAAAA             CGGCGC TCAAGG GCGCCG              TTTTGCTGCCGGCCA 100 127
ISU54_RS12625 2869687 .. 2869707 - -12.5  -3.76888   TACCGATAATAAATA            TCCTCCGGC ATA GCCGGAGGT            TTTTCATATGCGCCT 100 105
        zipA 2863393 .. 2863409 - -10.8   -5.5762   ACCAAAGATAAAAAA              CCCCCG GCATG CGGGGG              TTCGGGTTAATTCGA 100 76
        ligA NONE
ISU54_RS12585 2860851 .. 2860862 -  -2.2  -5.03945   GAAGAATTACAAAAA                CAGC AGCA ACTG                 ATTGAGACCCAAATT  70 285
ISU54_RS12550 NONE
ISU54_RS12545 NONE
ISU54_RS12540 NONE
ISU54_RS12535 NONE
ISU54_RS12530 NONE
ISU54_RS12525 2855949 .. 2855962 -  -5.9   -2.7185   ACGATCGCTTAACGA               GGCGC TACG GCACC                TTTTTTGTATCTATA  52 193
ISU54_RS12515 2852992 .. 2853002 -  -6.8  -4.16016   TCATCGCTCAATAAA                 GCCT GTC AGGC                 GGGTTTTCATGGAAT  71 82
ISU54_RS12495 2849803 .. 2849815 -  -9.1  -3.01848   TAAATAAAAAATTTA                GCGTG AAC CACGC                CGATTTTCTGAGGCG  68 10
         glk 2848588 .. 2848614 - -10.2  -2.78384   TTCTTCCGCATCATA         TCTGCCGGAA CTTATCC TCCCGGCAGA         TATTCTTCTGCGCCC  75 59
        alaC 2845622 .. 2845634 -  -3.4   -4.2693   AATCGATGAAAACAA                CATG AAGAA CATG                GCAATAATAGCGCAC  61 213
ISU54_RS12475 2844874 .. 2844887 -  -3.1  -3.60151   GCTTCTAAAGTAGAA               GCACTG GAA CAG-GC               CCTTTATTTATTGGG  49 172
ISU54_RS12465 NONE
ISU54_RS12460 NONE
ISU54_RS12455 2842062 .. 2842075 -  -2.3  -3.98661   GAGATTGATGACAAA               GCGAT TTAT AACGC                GGTGAGTGGAGGGTT  53 161
ISU54_RS12425 2834731 .. 2834743 -  -3.5   -3.6944   GGGTGAATATAAACA                TTTAA TTT TTAAA                CAATAATATTTATCA  53 91
ISU54_RS12415 2833062 .. 2833074 -  -6.9  -3.86015   TATTGCCCTGACAAA                CGGCG CGT CGCCA                TAACCAGAGCGGAGC  67 60
        mltB 2827868 .. 2827896 - -11.7  -4.65078   ATATCGTTAAGAAAA        GAGGGCGGCATAA CCC TAATGCAGCCCTC        TTTTTCATGCTATTG 100 35
ISU54_RS12390 2825697 .. 2825728 - -12.5  -2.64616   TTTTGAGCGATATCA      CGTCATGCTAAAT AACCCG ACTTAGCATGACG       TGGTCGTATTGGAAG  88 335
        tssH 2812623 .. 2812654 -  -3.8  -3.30418   GATTTATTAAATATA      TAGTTAATATTCGC TCAT GCCAATACTAGCTA       TTTTTTATTGCCTTT  49 151
ISU54_RS12340 2811930 .. 2811966 - -12.3  -3.17622   TATCTTTATAACAGA    CTTGCTACCGCAGCG TTTTATC CGCCTCGGCAGCAAG    CTGTTATGCTTTACT  93 93
ISU54_RS12335 NONE
ISU54_RS12330 2809021 .. 2809032 -  -3.6  -4.02022   TGGAAGGACTATAAA                GCCG TCAC CAGC                 GGTTTGAAAATGGTG  59 431
ISU54_RS12320 NONE
ISU54_RS12315 2806341 .. 2806360 -  -4.2  -4.51743   TCATCAGGAAATAAA            CTCCCTGA ACCG CCACGGAG             AGATCATATGGAAAT  66 65
        tssB NONE
        tssC 2804083 .. 2804100 -  -7.1  -2.84955   ACAACCATTACTACA             TCATTCA ATAT TGAATGA              ATAAAGGTCCCATGC  59 170
ISU54_RS12300 2803386 .. 2803408 -   -12  -4.72497   CACTTATTAAGAAAA           CCTGCCACCC CAA AGGTGGCAAG           TTTGATAGCGACATG 100 51
        tssJ NONE
        tssK 2801228 .. 2801244 -  -9.4  -4.25104   CTGCTTCTATCAAAA              GGAGGC ATTGA GCCTCC              AAGGTTCAAATCACT  88 49
ISU54_RS12280 NONE
ISU54_RS12275 2798483 .. 2798498 -  -3.2  -3.86944   GCGACAATGAGGAAA              CCACAC AACA GCATGG               ATACGCGCACCGGAA  53 315
        tssM 2793839 .. 2793851 -  -3.4  -4.28656   AGTTAATATCGAAAA                GTGT ACATG ACAC                TTTTAATTGTCTGTT  61 274
ISU54_RS12260 2791183 .. 2791221 -  -8.8   -3.1458   TCGAAAAATCAGAGA   CCGCATGCTCTACGTGTG TTT CCCACGCAGAACATGCTT   ACCTTTTATCTATAA  69 43
ISU54_RS12255 NONE
ISU54_RS12250 2790039 .. 2790052 -  -2.3  -2.91383   ATCCGTATTTATAGA               TGGCT GTCC AGCCC                TAGCTTGTAGAGCTC  42 5
ISU54_RS12245 NONE
ISU54_RS12240 2788573 .. 2788590 -  -3.5  -2.90075   TTCTGCTTAATGACA             TGAATAA CTCT TTACTCA              CCGTGGCTCAACGGG  45 33
ISU54_RS12235 2787727 .. 2787743 -  -2.3  -5.38326   TTAATTAAATAAAAA              GTGTA AAATGCA TACAC              ATCAATACAGTAACC  75 508
ISU54_RS12215 NONE
ISU54_RS12210 2783508 .. 2783524 -  -4.5  -3.31144   TTTTTATCGTGACAA              TACCATT GGG AATAGTA              TGGACATAGACAGAG  53 266
        ccmA NONE
        ccmB 2782019 .. 2782034 -    -4  -3.12803   TAGGCAGACTTAACA              TCAGCCC ATT GGG-TGA              TTACTGTATGCTCAC  49 26
ISU54_RS12195 2781229 .. 2781245 -  -2.1  -3.12395   CCCATGAGTGAAAAG              CGGGGGT CAT ACGCGCG              GCTCCTTGCGTAATA  43 15
        ccmD NONE
        ccmE NONE
ISU54_RS12180 NONE
ISU54_RS12175 NONE
ISU54_RS12170 NONE
        ccmI NONE
        mlaA 2775301 .. 2775328 - -17.2  -3.07113   CATCACCTTATCCAA        TAGAAAAGCGCC TGAT GGCGCTTTTCTA         TTTTGAATACGGCGG 100 77
ISU54_RS12150 2773241 .. 2773261 - -12.6  -3.90425   CATCTAAAGTAATAA            CGCGAAGC AAAAG GCTTCGCG            TTGGTCAGGTATGTA 100 62
        fadI NONE
        fadJ 2769255 .. 2769272 -  -4.8  -3.64822   ATTGCGTTACGTAAA             TCGCCC TAAATC GGGCAA              ATAATCATCACCGAA  57 130
        sixA 2768230 .. 2768249 -   -15   -3.8579   AGCCAATAAGCGAAA            GCGCGGCA AGAA TGCCGCGC             CAGTTAGACGTTGAT 100 94
        prmB 2766156 .. 2766171 -    -4  -3.81447   CAGACTTGATAAGAA              GTGATC AATT AATCAC               GGTACATGCTGAAAT  57 18
        aroC NONE
        mepA NONE
ISU54_RS12110 2763285 .. 2763313 - -10.3  -3.66883   GTAAGAGAGGGTAAA        CACCGCTAAAGTC ACC GTATTTAGCGGTG        GTGGGTGCCTAAATT  82 71
ISU54_RS12105 NONE
ISU54_RS12100 2762103 .. 2762113 -  -3.2  -4.16943   CGTTAGATGCCAAAA                 CGCT GGC AGCA                 TTGAATCCTAACCGT  59 293
        fabB 2758485 .. 2758504 - -12.2  -5.24003   AATAAAAAGTAAAAA            GCCTACGA TCTC TCGTAGGC             TTCAGACTGCTGACA 100 260
ISU54_RS12080 2756258 .. 2756281 -  -8.2  -5.40625   ACAGCATATAAAAAA          GCATGCAGAA TATC TTCCACATGC           TTTTTTTAAGCAATT 100 62
ISU54_RS12065 2752721 .. 2752739 -  -7.4  -3.01261   ACAGATGAAAAACAG             GGGGCTTA GTA TAAGCCAC             TATTGCCCCGCCGGA  61 12
        pdxB 2751492 .. 2751510 - -12.4  -3.38072   GTTATTGAACAGCAA             GGGCGGTA ACA CACCGCCC             TGTTATTAATTTTTA  95 67
ISU54_RS12055 NONE
        truA NONE
ISU54_RS12045 2748526 .. 2748562 -  -2.2   -5.4505   CTCTCCAATAAAAAA   TGCCTGAGATACA-CGC CAGT GCGACGTGGCTAAGGCA    CCGAAACTTGGATTG  78 135
        accD 2747489 .. 2747517 - -10.4  -2.90804   ATAAGGCACAATAAC       CGGGCACCA-TCT TACA AGAGTGATGCCCG        TTGAGTTAATCAGAC  76 35
        folC NONE
        dedD 2744959 .. 2744972 -  -3.1  -4.68456   ACGACTAAAAAACAA               CCATA ACCG CATGG                AAAAACACAATTACC  65 185
        cvpA 2744333 .. 2744346 -  -2.3  -2.57132   TCTTTTCCTCATAAG               CCGCT TCGA ATCGG                TAATTGATTCGGTAA  40 5
        purF 2742689 .. 2742718 -  -7.2  -5.15167   CACCATGAATAAAAA      GGTGC-ACC-GCGC CTAA ACGCAGGTTGCACC       TTTTTGGCTCATTCT  90 103
ISU54_RS12015 2741784 .. 2741813 -  -7.1  -5.18995   AACAGAATACAAAAA       CCCTACTACAGCA CCAT CGCTGTTGCAGGA        TCATTGTGGAGCATA  90 189
        hisJ NONE
        hisQ NONE
ISU54_RS12000 2739138 .. 2739155 -  -4.1  -3.04144   TCCGCATTTTTAATA             TAGGACG TATT CGTCATA              AAGTTCTCCGCACTA  47 38
        hisP 2738028 .. 2738042 -  -5.6  -2.59035   ACAATGAGCAATTTA               CGGCGA CGC TGGCCG               ATGTTTTGGATCGCC  47 340
ISU54_RS11985 2736210 .. 2736248 -  -3.7   -4.0896   AAATTTTGTCGAAAA   GGATCGCGCTGACAGCC CAGAC GAATACCCGCGCGATAC   AGCCTATCAAGGCGC  60 56
        yfcE NONE
        yfcD 2734686 .. 2734710 -  -5.7  -5.56673   ACTGATAATAAAAAA          CCAAAGCGC TTTAGCG GGGCTTTGG          TTTTTTTATTGAGCA  90 49
ISU54_RS11965 2731974 .. 2731986 -  -3.3  -4.33819   ATGATCGATAAGAAA                GCCAG AGC CTGTC                CATAATTCTGTGTAA  61 52
ISU54_RS11950 2729642 .. 2729661 - -10.7  -3.58343   GTCAGCAGTCTGAAA            CGCCAGC CTCTGC GCTGGCG             TTTTTGTTACATCAG  84 88
ISU54_RS11935 NONE
ISU54_RS11930 NONE
ISU54_RS11925 2723355 .. 2723371 -  -9.4  -5.42131   TAACGATACAAAAAA              GGTGCC GTCGA GGCACC              CTACTATTGGCTTAT 100 89
ISU54_RS11920 2721168 .. 2721178 -  -6.8  -4.15222   ATTTTCGGCAAGAAA                 CTGC TCA GCAG                 TCATCGCATGAACAT  71 158
        lrhA 2716705 .. 2716726 - -10.3  -2.57211   ACTCCTTTCGATAAC           CTTTTGTCA ACTT TGACAAAAG            TAACTACACATTAAT  74 521
ISU54_RS11900 2716029 .. 2716042 -  -3.1  -2.73681   CACTGACCCGAATCA               CTGAC TGAT ATCAG                CTTATCGGGATTCGT  43 27
ISU54_RS11895 NONE
        nuoC NONE
        nuoE NONE
        nuoF 2711314 .. 2711329 -  -4.6  -2.90813   CATGCTTCCAAATGA              CCCACC TTAC GGCAGG               CGTTAATCAAAAATT  50 76
        nuoG NONE
        nuoH NONE
        nuoI NONE
        nuoJ NONE
        nuoK NONE
        nuoL 2704306 .. 2704317 -  -5.8  -2.84098   GTCCCTAATTAATGA                GCCT ATTC AGGC                 ATCTACACGAAAAGC  53 28
        nuoM NONE
        nuoN 2701204 .. 2701231 - -14.2  -5.23292   CCAGATAAAACAAAA        CCCCCTGTAAGC CGAT ACTCACAGGGGG         TAGGGTCTATCTCGA 100 72
ISU54_RS11835 2699602 .. 2699615 -  -2.3  -4.32951   ACTTGAACGAATAAA               CGCTC AACC GAGAG                TTCCAAGGGAGCCAT  58 262
        idnO NONE
ISU54_RS11820 2697466 .. 2697492 - -10.1  -3.82218   AGGCAGAGGAGTAAA        GCGTCCGCGCCA AGGA TGGCGCGG-CTC         GAGCCTACATGGATG  84 438
ISU54_RS11800 2693856 .. 2693873 -  -2.7  -5.44721   ACCATGTTAAAAAAA             CATGTTA CCGG TAACGTG              ACCAGTTTATCATTA  80 255
ISU54_RS11795 2692481 .. 2692494 -  -5.3  -4.50058   CATGGATAACTAAAA               TCACT AAAG AGTGA                TTGAGGTTATTGACA  70 218
ISU54_RS11790 2690792 .. 2690810 -  -3.8  -2.71712   GTTGTTGCTGTAAAT             TCATCAGA TTC TCCGGTGA             TAAATGGCATCGGCT  44 40
ISU54_RS11785 NONE
ISU54_RS11780 2688387 .. 2688403 -  -4.5  -3.25538   CTCTGAATAAAACTA              CCTAAAT AGC ATTTAGA              AACGAATACAACACG  53 21
ISU54_RS11775 2687119 .. 2687136 -  -8.4  -3.27406   TGCTTACGATAAAAG             TGGCCC ACTTAA GGGCCA              GTAACCACAACGTAA  69 54
ISU54_RS11770 2685614 .. 2685630 -  -3.7  -3.18582   TAGCTCAGTGAGTAA              CAGGT TGAGCGC ACCTG              GCTGTCGTCTTACCC  48 361
        menF 2683857 .. 2683870 -  -2.3  -4.07687   ATGGTTTGCTCAAAA               GTCAG TTAA CAGAC                GCTACGGCCGTGATA  55 226
        menD NONE
        menH NONE
        menB NONE
        menC 2679282 .. 2679307 -  -2.5  -3.19511   CCAGATAAGCCAATA         GCAGGGTATAA CTGT TTTTACCGCGC          AAGGCCACGCCGCTC  44 201
        ybiB 2676818 .. 2676840 -  -9.1  -4.78848   CTTGGAAATACAAAA           GCCCATCCG TTCAT CTGATGGGC           TCAGACTGCTGACAA 100 241
        rlmF 2674855 .. 2674876 -  -3.9  -3.24771   AAATAAAAATAATGA           TTTATAAAA ATAT CTTTATAAA            AAAACAAATTAACGC  49 265
ISU54_RS11705 2670935 .. 2670963 - -13.2  -3.05997   TGGCTAGAAATCACA        CTGGCGGACATC TTACT GATACCCGCCAG        TTTTTTATAGGCTAT  95 158
        ompX 2662722 .. 2662737 -    -9  -5.82316   AGCAGGCAAAAAAAA              TCCGCT CGAA AGCGGA               CTTTTATCAGACACA 100 86
ISU54_RS11655 2661480 .. 2661503 -   -11  -4.81083   GGTAACCATTAAAAA          CCCCCAGC AAATCACG GCTGGGGG           AAGATAAAAGCACGG 100 66
ISU54_RS11650 2660696 .. 2660720 -  -2.2   -2.5121   ACGAAAGAAATAACC          CGTCAACATA GTGTA TATGTTAAAG          ATAAAGTCTAGTTAT  39 69
ISU54_RS11645 2659682 .. 2659692 -  -6.8  -4.98672   TTCAAAAAGACAAAA                 CGTC GGT GACG                 GTGAGAAATAAAAAA  86 233
ISU54_RS11640 2658021 .. 2658031 -  -5.4  -3.35001   CACATGATATAAAAC                 GGTA CTT TACC                 TTTGAGTAAGATAAA  55 85
ISU54_RS11635 2656953 .. 2656996 -  -4.7  -3.12069   TTAACTCTAATAAAG GCGTCATGGTTATCGCTCTGC CTGA GCAGAGCGAGAAT--TGACAC GCTTACCAGCTAAAA  51 28
ISU54_RS11630 NONE
ISU54_RS11625 2654365 .. 2654375 -  -6.8  -3.73042   CGGCCTACGAAAATA                 TGGG GCA CCCA                 TGTTCAACCCGCCGT  65 130
ISU54_RS11610 2650701 .. 2650735 -   -10  -3.45031   TTCTCAAAAAGTTAA     TAGGCATTCGTCCGAT TAA AACGGACGCATACCCA     AACCCGCCAACGCAG  78 257
ISU54_RS11600 2648648 .. 2648660 -  -5.5  -3.09491   CATACATTTAGGGAA                TACCG ACA CGGCA                TACAACGACATAGAA  53 69
ISU54_RS11590 2645988 .. 2645999 -    -3  -3.74902   AGATTGATGAAAACA                GAAT ATTT ATTC                 ACTCTGAGAAAATGT  53 498
ISU54_RS11585 2644049 .. 2644062 -  -5.3  -2.73681   CACTCACTCGAATCA               CTTAC TTGA GTAAG                CTCATCGGGATGAGT  50 94
        cdiA NONE
ISU54_RS11575 2635771 .. 2635800 -    -7  -3.05844   TTCGGTACTGCAACA       GGTGGCGGAACC GGTATT GGCACCGCCAGC        AAGTTATTCTCAACA  58 94
ISU54_RS11570 NONE
ISU54_RS11565 2634851 .. 2634883 - -12.1  -3.58726   GTTTTCTATAGACAA      TAATTATCCTCCGGC ATA GTCGGGGGATAATTA      TTCAAGGTTTAGGAT  93 27
ISU54_RS11555 2632428 .. 2632449 -  -8.7  -3.35371   TAGAGTTTGAAGCAA           GCCCCAGCCA AAT TGGCCGGG-C           TTGCTTCATCACGGG  71 45
ISU54_RS11545 NONE
ISU54_RS11540 2630746 .. 2630761 -  -3.4  -3.05963   ATTTGTAGTCCAAGA              TAAATA GGCT TATTTA               ATGGCAATTATGATG  44 265
ISU54_RS11535 2630165 .. 2630182 -  -2.7  -3.21099   CGGTGGGATCATCAA             CTGGATT AGGG AATACAG              TCATTATCAGGTTGA  44 41
ISU54_RS11515 2624720 .. 2624737 -  -4.9  -2.80098   AGGATTCCAAAATAT             TAGGACT TTAA AATCCTA              GCGTTTTAAAATCTT  49 39
ISU54_RS11510 NONE
ISU54_RS11505 2622823 .. 2622844 -  -5.8  -2.58491   TATAAATAGCAATAT           CGTGGTGA GTCATT TCACCGCG            TTTTCGAGTATCAAA  52 123
ISU54_RS11500 2621743 .. 2621754 -  -5.8  -2.71731   TTTATCCCGTAATTA                CACC GACA GGTG                 CTGCCACAGTTGAGC  52 11
ISU54_RS11495 2620696 .. 2620710 -  -2.8  -4.11304   CCAATCGATAAATAA               TGGG AACTCCA CCCA               ATCTAATTGATATTA  57 90
ISU54_RS11490 NONE
ISU54_RS11485 2618159 .. 2618194 -   -12  -3.14132   TGGCTGGTGTACTAA    TGGTGCTCTGAAATAT AAAA ATAATTCAGAGCACCG     GGGCTACTATTTACA  86 55
       cas1f NONE
       cas3f 2611118 .. 2611132 -  -5.7   -3.5121   ATTATGATAACAACA               CTGTC GTACA GACAG               CTCAGAAATAATCAA  59 91
        csy1 NONE
        csy2 NONE
        csy3 NONE
       cas6f 2606861 .. 2606902 -  -9.7  -2.71731   GTGATTCTTTAACTA TTGGCCAGTG-CAACATA AAATCAA TACGTTAACACTGGCCAA AAAGAATCAAAACCA  71 32
ISU54_RS11425 2603478 .. 2603490 -  -3.4  -3.51124   ACCAACGATGAAATA                TTGC CTGGC GCAA                AAACCACAACCCAGA  49 95
ISU54_RS11420 2602116 .. 2602133 -  -4.2  -5.52909   CAAGATGTAAAAAAA             TGTGAT CACTGC ATCACA              TTCAAATTATTGACA  85 411
ISU54_RS11415 2600884 .. 2600895 -  -2.2  -3.10908   AAATGCAGTATCCAA                CCAT GATT ACGG                 GGCCTTTTGCTCCTT  42 425
ISU54_RS11405 2599393 .. 2599408 -    -9  -3.08934   GTAGATACGTGAACA              GCACAG TACG CTGTGC               CGTGATTTTTCTCAC  69 167
ISU54_RS11400 NONE
ISU54_RS11395 2597331 .. 2597361 -  -4.6  -4.20118   AAGACGGAAAAAAGA       GACGCCAGCGGATA AAG TAACCGACAACGTC       AACTAAAGCCTAATT  63 96
ISU54_RS11390 2595816 .. 2595826 -    -4  -3.90744   TGTGTTGTTAAATAA                 GAAT TGT ATTC                 TCTGGTTGAACGCGA  57 424
ISU54_RS11370 2591953 .. 2591998 -   -15  -4.62957   AGAATCAAAGTAAAA TTAA-ACGGCCTGAGTCCGGT GCAGT ACCGAACTCAGGCCATGTCAA CCGCCAGAGAAAGTG 100 115
        pyrC 2589934 .. 2589989 -  -5.6  -2.59742   TTCAACGCGCATAAT TGGTCCTCCGAATATTCATACTGTTT ATTT ATACAGTATAAACATTCAGGCGACAA GAGACTGATATAAAA  52 279
        dinI 2589410 .. 2589432 -  -5.4  -5.26875   GTTTTAAGCAAAAAA           GGCTGAGGAG CGA CTCCCCGGCA           AAATGGTATTGTGGT  84 278
        bssS 2588525 .. 2588536 -  -3.6  -4.02022   TGGAAGGACTATAAA                GCCG TCAC CAGC                 GGTTTGAAAATGGTG  59 372
        rluC 2582361 .. 2582383 - -10.5  -5.09204   ACAGTCGAATAAAAA           CGGGGCGCA TGCTG TGCCCCCCG           CCTTTTATGATCATC 100 71
        yceD NONE
        rpmF 2580826 .. 2580843 -    -2  -3.49475   GCTAGGGTCAGACAA             GCCAAGG TATCG CCTTG-C             TAAAGATTAGCAAGT  47 46
        plsX NONE
ISU54_RS11305 NONE
        fabD NONE
        fabG 2576993 .. 2577006 -  -2.3  -4.25848   AATTTCCTATCAAAA               CTCGC TTTC GCGAT                GGTTTTCGTAGTGTA  58 143
        acpP 2576684 .. 2576709 - -11.9  -5.93809   TTCGGACAAAAAAAA         CTTAGGCGGTC GAAT GACCGCCTAAC          TATCTAAACTTAAAG 100 50
        fabF 2575349 .. 2575367 -  -9.5  -4.77165   CTGGGCACAATAAAA             GACCCGG AAAAA CCGGGCC             TTTTTAGCATCAGAA 100 56
ISU54_RS11280 2574638 .. 2574662 -  -9.9  -4.50761   ATGAATTTAAATAAA          TATCCTCCGGC ATA GCCGGAGGTTT          TTCATATGCGCCTAT 100 103
        pabC 2573379 .. 2573405 - -10.1   -3.8381   AGACAGAGGAGTAAA        GCGTCCGCGCCA AGGA TGGCGCGG-CTC         GAGCCTACATGGATG  84 138
        mltG NONE
ISU54_RS11265 NONE
        holB NONE
ISU54_RS11255 2569601 .. 2569627 -  -7.3  -4.15044   GTTTCTTTCAAGAAA         GCACGTAATCC CTCTC GGATTTCGTAC         TTTACGTAAAGAAAC  73 128
        ptsG 2567950 .. 2567967 - -12.7  -4.30719   TCTGGGCACAATAAA             GGGAGGC TTTC GCCTCCC              TTTTGCTCTCCCCTA 100 48
ISU54_RS11245 2567236 .. 2567268 - -11.3  -4.42806   TTAGTTTGAAATAAA      TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA      TATGCGCCTATAAGG 100 99
ISU54_RS11240 2566082 .. 2566100 -  -3.8  -2.91395   ACTGCGCTTATAAAT             CAGCCTCT TGC ATAAGCTG             CGGCTTGTTCAAACA  46 6
        hinT NONE
ISU54_RS11230 NONE
        lpoB NONE
        thiK 2563625 .. 2563648 -  -2.3  -3.39803   TATTCAGATTGATAA          CGACCCTTC GTGCTT GAAGCGGCG           GGCTTGGTGCCGCAG  45 44
        nagZ 2562491 .. 2562512 -    -5  -3.76224   GCGTTACTGATCAAA           GCCCCCAC AGAAAA GAGGGAGC            TCTTGGCCCTTATGA  59 78
ISU54_RS11210 2561569 .. 2561580 -    -3  -4.63993   AAGGGTAAAAAATAA                TATC CTTA GATA                 ACATAGGGTTCGCTA  65 340
ISU54_RS11205 2560047 .. 2560061 -    -5  -3.93583   CAAGTCAGCGACAAA               TCGGTT AGA AACCAA               TTTGAACAGCATTTA  61 180
ISU54_RS11200 NONE
ISU54_RS11195 NONE
ISU54_RS11190 2557258 .. 2557272 -  -3.5  -4.34263   TGGCAATAAGACAAA               GGAGT CAAAT ACCCC               AAGAGCAGGTGTAAG  63 137
ISU54_RS11185 2556038 .. 2556050 -  -9.1  -2.77192   AATTGCGTCAACAAG                CCCAG AAA CTGGG                TATCAAACGTATTGA  62 490
        lolC NONE
        lolD 2550640 .. 2550664 -  -2.7  -3.86995   GTAAACCGATAAGAA          GTGAAAGTGGC GAA ACCCCCATCAC          TCGGCCCCCACCAGC  52 22
        lolE NONE
        nagK NONE
ISU54_RS11155 NONE
        cobB 2547573 .. 2547587 -  -6.4   -2.7386   AAGTTATCTGAATGA               GTTGAG GCA CCCAAC               GGGGAAATCAATCCC  55 33
        pepT 2545994 .. 2546010 - -10.8  -3.72051   GTCAATAACCTCAAA              CGCCCC TTTTC GGGGCG              TTTCTCTCTATCGTT  84 45
         icd 2535520 .. 2535561 - -14.7     -3.54   AGCACGCCATAAATA GTATAAACTTCACGAAAGC ATAA GCCCTCGTGAAGTTTATAG  ATACGTCAGAACTAC 100 37
ISU54_RS11070 2529822 .. 2529842 -  -7.5  -3.07254   AAAGACGATAAATCA            CGACGGTCA TAC TGACCGCTG            CTGCCGTTGTTCCAT  62 11
ISU54_RS11065 2529594 .. 2529613 -  -6.4  -3.60685   TGGTAAAAAAAAGGA            CCGCTAACC TCT GGCT-GCGG            ATAAATAAATGCAGA  63 9
ISU54_RS11060 2527746 .. 2527768 -  -4.8  -4.28548   AGCCACCGATTAAAA           CAGCGGTT TCCGATT AACCGCAG           TACGCTTTCCTGCCG  66 228
        cspE 2519009 .. 2519022 -  -9.5  -5.25893   ACAGACAGTAAAAAA               CCCGC CTTA GCGGG                TTTTTTTATAATCAG 100 52
        dsrB 2518563 .. 2518592 -    -8   -5.2197   GATAAAAAGCAAAAA      CCGGAGGATAAGGT ATGA ACCTT--CCTCCGG       TTTTTTATCGCAATA  95 76
ISU54_RS11005 2514819 .. 2514842 -  -2.6   -3.0127   TGACTTAATGAGACA          CTAAATAATA AATC CATTATTTAA           TTAACTTGTCGTTTT  43 85
        mgtA 2511732 .. 2511764 - -14.3  -3.18571   TCTTTTAAATACACA      CACTATTCCAGGG CAGCCAC CCCCGGAATAGTG      TCTTGAGATCAACCA 100 63
        flhC 2509561 .. 2509574 -  -3.8  -4.19624   GACGGTCAACAGAAA               CGGT CGCTAT ACCG                CTGCTGTAACCTACC  60 129
        motA NONE
        motB NONE
        cheA 2505107 .. 2505117 -  -5.4  -3.28924   TACCTGTTTTTATAA                 GGAA AAA TTCC                 TGTGCGCTATGCGGT  55 32
        cheW 2504210 .. 2504240 -  -9.6  -3.87075   ATGACTTGTCATAAA       GAACCGCCCGAGCA ATA TGCAATGGCGGTTC       AGTTCTTTATTTCAG  81 249
ISU54_RS10950 2500539 .. 2500551 -  -3.5  -4.00445   CATCACCAAGAACAA                TAATT GTT AATTA                ATCGTGTCAGTTTAA  58 183
        yapJ 2496049 .. 2496062 -  -5.3   -4.4009   CGGCAGTGTAGAAAA               GTTAG CCAG CTAAC                ACCAATGGGTTAAAT  68 391
ISU54_RS10940 2493019 .. 2493031 -  -3.3  -3.11024   TCCGGTAAGACAAAT                GGCGA TTA TTGCC                CGCTTTGTACCACGT  46 18
ISU54_RS10935 NONE
ISU54_RS10930 NONE
ISU54_RS10925 NONE
        cheR NONE
ISU54_RS10915 2486401 .. 2486416 -  -5.4  -2.52602   GATTAAATGCAATAG              CCCGAT GGTT ATCGGA               AAAATAATTTATAGA  49 61
        cheY NONE
        cheZ 2485263 .. 2485286 - -14.6  -4.58297   TATGAAAAATATAAA          CCGGCAGGGA CAAT TCCCTACCGG           TTAGCGCTATCGATA 100 47
ISU54_RS10900 2483859 .. 2483878 -  -8.6  -2.66395   AGGCAGCAGTACAAC            CACGCCTA TAAA TAGGCATG             CAGAATTCATTAAAT  63 120
ISU54_RS10895 NONE
ISU54_RS10890 2480919 .. 2480946 - -14.2  -2.76171   CCTAAGAAGTAGAAT        CGGGCTGTGCAA AAAA TCGCACAACCCG         TTAATGATTATTAAA  95 64
ISU54_RS10885 2479750 .. 2479773 -  -2.4  -3.67597   CCGGCGACCCAACAA          GAGAGTTC CCATGCTC GAACGCTC           TCAGTATCCGCACTA  49 184
ISU54_RS10870 2476509 .. 2476535 -  -7.2   -3.9749   AGGCAGAAGAGTAAA        GCGTCCGCGCC AGGGAG GGCGCGG-CTC         GAGCCCCCAGGGATG  72 165
ISU54_RS10865 NONE
ISU54_RS10860 2474563 .. 2474601 -    -4  -4.03909   GATAGAGTAAAAACA  TTCACCACGC--GGCATG GCTGG CATGCTTGGCGTAGTGAA  ATGGTAGGCAGATTA  59 62
ISU54_RS10845 2471268 .. 2471307 -  -3.6  -4.26903   TGGATGGGATGAAAA  CACCAGTATTCCTGCTATC TTG GATGGCAAGGATAC-GCTG  TTATACAAGCAACAT  61 192
ISU54_RS10795 2459531 .. 2459550 - -12.2   -3.1552   GCGCAGGCATGAACA            GGCGTCAT TATA ATGACGCC             ATCAGCAATTGCCAC  86 53
        proQ NONE
         prc 2456634 .. 2456655 -  -8.7  -6.31682   AAAAGCAAAAAAAAA           TCCGAGTCC AATA AGACCCGGA            TTCTTCATATTATTT 100 47
        htpX 2455235 .. 2455263 - -13.2  -5.44119   GCCACGGTAAAAAAA        CACCCTGTCAGC TTACC GCTCACAGGGTG        TGAAGACCATATTAT 100 103
ISU54_RS10775 2454019 .. 2454039 -  -6.8    -2.981   GTCGAACTTATAAAG            CTGGGAGC ACTAA GCTCCCAT            TTTATGCCGGATTGG  58 127
ISU54_RS10770 2453175 .. 2453196 -  -7.5  -5.15117   TAAAAGTGCAAAAAA           TACAAATTA CCCT TAATTTGTA            TTTTTTATAGTTTTA  90 38
ISU54_RS10765 NONE
ISU54_RS10760 NONE
ISU54_RS10755 2448412 .. 2448423 -  -3.6  -2.60194   ATGTTCTCAACCAAC                GGCA CCCA CGCC                 TCCTTGATACTGGCT  43 157
         ogl 2445602 .. 2445628 - -12.4  -3.88498   CTTGCAGACAGCAAA         TTAGCCTCTTTC TAA GAGAGAGGCTAA         TGGAAAACTCGGCTA 100 38
        kdgR 2444540 .. 2444560 -    -9   -4.7373   TCATGTGATGAAAAA            CAGCCCCT GCCAG AGGAGCTG            TTTTTATAAAAAGAG 100 128
ISU54_RS10735 2443412 .. 2443424 -  -3.3  -3.50869   GATGAGTGGACACAA                CTCCC CCC GGCAG                CCTCAAGTGCTAAGG  49 28
ISU54_RS10680 NONE
ISU54_RS10675 2429568 .. 2429595 - -14.2  -3.09784   TCAGCGGTAATAAAG        GGCGGCCAGAGTC AGT GACTC-AGCCGCC        GAATATATTTTAGAG 100 84
ISU54_RS10665 2427729 .. 2427745 -  -4.3  -3.85237   AATAAATGAAAAAAG              CCAGCGC ATC GCAGTGG              TGTTGGCTTTGATGT  57 53
ISU54_RS10630 2421910 .. 2421952 -  -6.3  -4.13183   AAAATTTAAAGTAAA CGCTAGCCGATGCTACACCA TCCA TAG-GCTACATCGGTTAGCG TTTTAGCATTACTCT  69 34
ISU54_RS10620 2420198 .. 2420216 -  -4.5  -3.25481   AAAGACGCTATAACA             TCGCCCT AATTA AGGGCTA             TCAGTTAGCAAAATT  53 395
        thrS NONE
        infC 2416696 .. 2416725 -  -5.2  -3.06492   CTAGCTAGGCGAACA      GGTTTCTTACTACG CAAG CGTAG-A-GAAACC       TGCTACTTGAATGCC  52 41
        rpmI NONE
        rplT 2416022 .. 2416040 - -10.3  -4.49756   GTGCAAAGATTAAAA             GAGGGAG ACAAG CTCCCTC             TTCAATTCTGACTTA 100 38
        pheM 2415846 .. 2415863 -  -8.4  -6.04324   GTAAAAAACAAAAAA             GCCTCC ACGATG GGAGGC              TTCGGCGCTATTTTT 100 48
        pheS NONE
        pheT NONE
        ihfA 2411835 .. 2411850 - -11.8  -5.45802   TCTTGAAAAGAAAAA              GGCCGC TTGC GCGGCC               TTTTATGTCGGAAAC 100 44
ISU54_RS10570 2411016 .. 2411060 -  -8.7  -3.63515   CTTTATTGCTAATAA GTCGCTAACTCTGCTTGGTCA TAG CAAACAAGTAAAGTTAGCAAC TGTTTGTTATGCTCG  75 42
        btuC 2409808 .. 2409821 -  -4.5  -3.22995   GTAATGATAATAAAC               CGGTA AAAT CACCG                CGGCATTTATAAGAA  51 47
ISU54_RS10560 NONE
        btuD 2408362 .. 2408377 -    -4  -4.35042   TCCACGATAAAATAA              CATCGT AAGC ACAATG               ATCTGATGAGAATAG  63 84
        arnB NONE
        arnC NONE
        arnA NONE
ISU54_RS10535 NONE
        arnT NONE
        arnE NONE
        arnF NONE
ISU54_RS10510 2399939 .. 2399949 -  -2.4  -2.82584   GAGAAAATCAAATAC                 GCCG TGC CTGC                 CAGTAAACTCGTTTC  41 7
ISU54_RS10505 2398328 .. 2398349 -  -2.3  -4.62069   TTCGGAGGCCAAAAA           CTCACGTATC ACA GA-ACGCAAG           ACAGCCCGGCCATCC  63 466
        ppsA 2392259 .. 2392278 -   -10  -5.47399   TTAATTGCAAAAAAA            TCCGCAAC CTAA GCTGCGGA             TGATGAATACCTATA 100 108
ISU54_RS10470 NONE
ISU54_RS10465 2386436 .. 2386454 -  -5.3  -5.03314   GCTATTGGCAAAAAA            TGACGACG TTAG CG-CGTCA             ATACGGCGATCGTTA  78 15
        sufA NONE
        sufB 2383953 .. 2383964 -  -2.2   -2.8082   TACTCAGCTAACAAT                CAGC CGAC ACTG                 TGCTCCAAACTAATG  41 13
        sufC NONE
        sufD NONE
        sufS 2380446 .. 2380470 -  -6.4  -5.43553   ACGTAAAAAATAAAA          GCCGACTGCT GAAAG AATAGTCGGC          TTTGGTGTTGCCTGT  91 58
        sufE 2379950 .. 2379962 -  -3.3  -4.78149   CTCACAACGCAAAAA                TGGTC AGA GCCCA                ATAATTAAAGAGCAA  68 55
ISU54_RS10430 2378607 .. 2378649 - -15.1  -2.79452   AGCGCGGAATACAAT TCTG-GCTTTACCACGATGG ATCT CCACCACGGTAAAGCACAGA CAAGTGATTAGTTAT 100 33
ISU54_RS10375 2370309 .. 2370332 -  -9.6  -2.70275   TAACCTCAGATAGGA          GACAGGGG GATAAAAA CCCCTGTC           TTATTTTTTGTAGGT  68 40
ISU54_RS10360 2365838 .. 2365855 -  -6.9   -4.9725   ATTCTGACACAAAAA             CATCGCC CAAC GGCGGTG              TTCTGTGGCGGCGAT  86 411
        ynhF 2364653 .. 2364675 - -16.4  -4.28188   CATCGATAACATAAA           TAAGGGCGGT TTA ACCGCCCTTA           TTATTACCATTCACC 100 54
ISU54_RS10335 2361796 .. 2361807 -    -3  -3.58329   TAAAGACGCCGTAAA                TACA TCCA TGTA                 GGCTCGAACCGCGCC  51 221
ISU54_RS10330 2361396 .. 2361408 -  -4.1  -3.30159   GTAACCGGGCCATAA                TCGTG GCA CACAA                TGCCAATTTTGATCA  48 326
        rovA 2355980 .. 2356002 - -15.6  -4.90906   TCAGAACAGTAAAAA           CCGGGGTTCA TTG CGAACCCCGG           TTTGTTTTTTGTACT 100 91
        anmK 2353757 .. 2353779 -    -7  -3.09516   TGTGTGATTAGGTAA           GCTACCGTAA GAT CTAAGGTAGC           TTATCACCGTCACCA  59 35
ISU54_RS10285 NONE
        pdxH 2352555 .. 2352570 -  -4.6  -3.85909   TTAGCTAAACGGAAA              CACCAC ACAA GCGGCG               CGCATATATTTTCAA  59 128
        tyrS 2351182 .. 2351203 -  -5.1  -5.52384   GTCTCAGCAAAAAAA           TAAGGGACA TTTC TGCCCCTTC            TCTTATTTTACGCTT  87 39
        pdxY 2350160 .. 2350190 - -15.6  -3.51694   AATAATGAGAATCAA       TCAATTGCCCCC ATCACTA GGGGGCAATTGA       AAATGGTTAGATTAC 100 37
ISU54_RS10215 2337614 .. 2337632 - -12.4  -2.95598   GGGTAAAATAAATAT             CCTCCGAC ATA GCCGGAGG             TTTTTCATATGCGCC  93 106
        pspA NONE
        pspB NONE
        pspC 2334810 .. 2334830 -  -3.2  -4.74917   ATTAAACAGAGAAAA            CGCCAGCA TTACC TGATGGCA            GGCCCGCCTAACGGT  68 57
        pspD NONE
ISU54_RS10185 NONE
ISU54_RS10180 2331814 .. 2331829 -  -2.6  -3.09987   TCAACACTCAGCGAA              TTTGAA TTAT TCCAAA               TTGAAATCAGTGACA  42 295
        tyrR 2329144 .. 2329162 -   -16   -4.8048   GGCGCATATGAAAAA             CCTCCGGC TAT GCCGGAGG             ATATTTATTTACTCT 100 73
        ycjG 2326455 .. 2326481 -    -8  -3.05384   TTGGCCTGCATTGAA         GATCCCCAATGC TCG GCATTAGGTACC         CGGTTGGCAGAGCAA  62 256
ISU54_RS10140 2323847 .. 2323873 -   -16  -2.57496   GGACAAGAATAAATG         CAAAGGCGGATT TAA AATCCGCCTCTG         TTAATTAGTTAAAAA 100 58
        zntB 2322459 .. 2322482 -   -14  -5.60993   CGGCGCACAAAAAAA          TGCCGATGTT TTTC AACATCGGCA           CCGTAACAATTAAAT 100 223
ISU54_RS10110 2314174 .. 2314186 -  -7.7  -3.10641   GAATTGACGATGGAA                GTGAC GTT GTCAC                CCAAAAAGACGGTAA  59 159
ISU54_RS10100 2312726 .. 2312742 -  -2.1  -4.43309   CAAGGTGAATTAAAA              GACGGCA TAT TGACGGC              TAAGGGGCTGGCGAG  60 258
ISU54_RS10085 NONE
ISU54_RS10080 NONE
ISU54_RS10075 2307453 .. 2307463 -  -6.8  -3.16055   GAAAGTTGGCACCAA                 GGCA CTC TGCC                 GTATGAATATCAGGA  56 431
ISU54_RS10065 2305014 .. 2305053 -  -3.6  -3.35813   TGTCACCCTAATGAA  CGAGTAAAAAGATGGC CTCGTATT ACCCTCATTTTACCCG   AAAGCCATGTGATGA  49 65
        hrpA 2300007 .. 2300047 -  -8.4  -5.48514   ACTAAGAAATAAAAA GAATTCGACGCCTAAGTCT AGAT AG-CTCAGGCGTCGAATAG  GGGCATCAATCAGAC 100 35
ISU54_RS10050 NONE
ISU54_RS10045 2298629 .. 2298677 -  -5.4  -4.34223   AATCCAATTAACAAA TGCAGCGCCTATCCCCATCAAGCC ATT GCCTTTATGGG-A-AGGTACTGCA AATGAACTGACAAAA  69 417
ISU54_RS10025 2295976 .. 2296007 - -10.4  -3.79043   CATTACTAACCGAAA      GATAGTTATATTCA GAAA TGGATATAACTATC       CTAAAAAATTCACAC  86 70
ISU54_RS09995 2285337 .. 2285372 -  -2.6  -5.49809   CAAAGCGGAAAAAAA    GGAGAAGGCCACCAA GAATAGT TCAGTGGCCT-CTCG    AAAATTCTGAATGGT  80 46
        oppA 2282882 .. 2282909 -  -6.9  -3.66018   TCATTAGTGCAATAA        GGGCAGCCACC AACTCA GTTGCCTGCCC         TTCATACATTACTGC  65 34
        oppB NONE
        oppC NONE
ISU54_RS09975 NONE
        oppF 2278499 .. 2278515 -  -4.5  -5.05228   ATTAAATGACAAAAA              CACATTA ACT TAATATG              TTTTAATTCGTCAAT  77 486
ISU54_RS09965 2278075 .. 2278108 - -16.9  -3.80114   CAGCAATCGAGTAAA     TCCTCAGTCACTTAG ATAA CTAAGTGACTGAGGT      GAGCAAGAGCAGCTC 100 117
ISU54_RS09945 2275297 .. 2275313 -  -8.7  -5.48213   GATTCAAAACAAAAA              CAGCCTC ATA GAGACTG              CCTTATTACCATAAT 100 47
ISU54_RS09940 2274288 .. 2274309 -  -4.4   -4.2803   TATCCGAATGTAAAA           GCCACC GAGTTTATAA GGTGGC            ATAAAAGTAATAATA  63 83
ISU54_RS09935 2273802 .. 2273837 -   -18  -2.88999   GTTGTAGACACTAGA    TATAATAATACGCCTA AAGC TAGGCGTATTATTATA     AGTTTTTTTTGTTAA 100 71
        tonB 2271513 .. 2271524 -  -3.6  -4.02022   TGGAAGGACTATAAA                GCCG TCAC CAGC                 GGTTTGAAAATGGTG  59 445
ISU54_RS09900 2268179 .. 2268193 -  -4.2  -3.33419   AGCGTTAAATCAACA               CGACAC CTA ATGCCG               CAATGGGAATAAATT  51 0
ISU54_RS09895 2267448 .. 2267470 - -16.4  -4.68593   TGTATCATTCAAAAA           CGCCTGATGT ATT ACATCAGGCG           TTCAAACTGTAGACA 100 71
ISU54_RS09885 NONE
        ompW 2265362 .. 2265394 -    -7  -5.30155   TGATTAAGTAAAAAA     CAGGA-GGAGGCGCA TAAC CGCACCTCCTTACTG      CCCGCCTAACTGATG  89 135
ISU54_RS09835 NONE
ISU54_RS09830 2255786 .. 2255808 -  -6.4  -3.27498   GACATTTTACACTAA           TATTAGGATC AAT GATTCTAATA           AATAGATATGTTGTT  59 189
        rluB 2254475 .. 2254505 - -15.6  -4.42235   AAGCGTTAAAAATAA       TATTGCCGCAGTCC AAA AAACTGCGGCAATA       AGCATTATTCACGTC 100 94
        sohB 2251803 .. 2251832 - -10.8  -3.44848   GGTTGGTAGCAAATA       GCAGGGGGT-ACC GTTCA GATTACCCCCTGC       ATTTATTGCCATCAC  83 58
ISU54_RS09800 NONE
        topA 2248384 .. 2248400 -  -9.4  -5.46657   TAGCCCAATAAAAAA              CCAGCC GCGAA GGCTGG              CTTTACCGAGGTCAG 100 86
        cysB 2247075 .. 2247108 -  -3.3  -3.97307   TTCAGCTAACAATAA     TAAATTGCTACTAAA TCAT TTCACTGGCAATTTA      ATATCATTAAACATG  56 7
ISU54_RS09785 2245716 .. 2245736 -  -4.7   -2.7728   CTGAAACTCGAATTA            TTTAGGGTC TAT AACCCTAAT            GTTATGAGGTCTAGC  49 186
        acnA 2242729 .. 2242755 - -10.2  -4.16033   GCGAAATAAGAATAA         GGGTAGGTTCAA TAA TTATACCTACCC         TTTAGAGGCTGATAA  91 131
        pgpB NONE
ISU54_RS09765 2240344 .. 2240358 -  -5.8  -2.91656   ACAGCAGAAACAGCA               TTTCTA ACA TAGAAA               ATTATTCCTTGTTGA  54 27
        lapB 2238794 .. 2238804 -  -5.4   -4.3534   CCTTAACCATTAAAA                 TTCC TCT GGAA                 TTAAAAGAAAAAATC  69 405
        pyrF NONE
        yciH 2237162 .. 2237199 - -14.5  -3.62859   ATTAGAAGTTCTAAA   TAAAATACGGCGTTTGAC AAT ATCA-ACGCCGTATTTTA   TATCTGCGCGGAAAA 100 56
        araD 2235559 .. 2235580 -  -5.1  -4.56597   CTCTGGCTGGAAAAA           CCCGTGC AAGACTGA ACACGGG            CTCATTATTTATGTT  70 47
         fsa 2233991 .. 2234010 -  -6.4  -2.72463   ACTCAGGTCGAAGCA            GCCC-CAAC CAC GCTGTGGGC            ATGGGTACGGCTGAT  51 341
ISU54_RS09705 NONE
ISU54_RS09700 2226305 .. 2226315 -  -2.4  -4.08767   TGTATTGCCCGAAAA                 CCCC GTT GCGG                 TTCATGCATTATTGA  55 266
ISU54_RS09675 2221489 .. 2221500 -  -4.4  -4.26351   GATCAACGGAAGAAA                CAAC CGAC GTTG                 TTGATCCTCGTCAAG  63 447
ISU54_RS09650 NONE
ISU54_RS09645 NONE
ISU54_RS09640 NONE
ISU54_RS09635 NONE
ISU54_RS09630 2211861 .. 2211877 -  -5.1  -4.49311   ATCAGTATTATAAAA              TTCGCTA TGA TAGCGAC              ACCCTCAGAGGCCTG  70 151
ISU54_RS09615 NONE
        araG 2205472 .. 2205483 -  -7.2  -3.09015   TTCACAGTCAGGCAA                CCGC AGAC GCGG                 TATTGGTGGCAATAT  62 6
        araH 2204242 .. 2204266 -    -5  -3.49475   GTCAGTTTTATACAA         TCAG-GCTCAC GTCA GTGAGCTCGGA          TGAGTAAAAGCCACT  55 156
        araC NONE
ISU54_RS09595 2201995 .. 2202022 -  -7.8  -6.32976   AAAAAAATAAAAAAA        CTCTGGGCCAC GGAGATT GTG-CCCAGAG        AGATATTTCCACCCT 100 70
ISU54_RS09590 2200703 .. 2200715 -  -6.3  -4.03888   GATGCACAAGAATAA                TCCTT AAA AAGGA                TGGCGTTTTCTATCA  67 155
ISU54_RS09585 2200020 .. 2200037 - -12.7  -4.82901   TTTGTTTGATAAAAA             CGGAGCC CATT GGCTCCG              TTTTAAATCTCTATT 100 28
        fumC 2194913 .. 2194926 -  -3.7  -5.29782   TACAGCTAGAAAAAA               GCCTG AATG CTGGC                CGAGCTGTTCCTCCA  82 450
ISU54_RS09555 2191557 .. 2191578 -  -5.9  -2.90496   TTTTTGCCTAAATGA           CTCTTTAAC TCTT GTAAAAGAG            TATTTTTCGCGCTTC  54 189
ISU54_RS09550 2190280 .. 2190296 -  -5.3  -3.19389   GAAGGTACCCACTAA              TAATTAA CTC TTAATTA              TTAGATTTAATACAC  53 40
        bioD 2189414 .. 2189427 -  -2.3  -4.07124   TAGGATGGATATAAA               TCGGG TTAT CCTGA                AATAGCTGTAAGATC  53 17
ISU54_RS09520 NONE
ISU54_RS09515 NONE
ISU54_RS09510 2181843 .. 2181876 - -10.3  -4.74453   GAATAGATTGAAAAA     CAACGCAGGCGGATGA TGA TCA-CCGCCTGCGTAT     TGAATTGAGAGAGCT 100 398
ISU54_RS09500 NONE
ISU54_RS09495 NONE
ISU54_RS09490 2173010 .. 2173036 -  -7.9  -5.00616   CTGCTGTTTAAAAAA         TGCGCTTCTCC GTCGG GGAGTTGCGCA         TTTTTGTGGCACGTT  95 71
        ivbL 2171587 .. 2171611 -   -15  -4.96501   GGCGATAAAAAGAAA         CCCCGCTCGGC TGGC GCCG-GCGGGG          TTTGGGAATCTTTCT 100 55
        ilvB NONE
        ilvN 2169510 .. 2169552 -   -15  -3.65046   TCCCTACTCGAATAA GCCCGTTAAACCCTGTCG GCAGTAA CGACAGGGTTTAACGTGT GACAACGTCACCTTT 100 33
         ogt 2163559 .. 2163570 -    -3  -2.98778   TAAGAGCAACAATGA                TTAG CAAC CTAA                 AAGATAACCCTCATG  44 14
ISU54_RS09445 2162686 .. 2162718 -  -7.2  -3.41125   GTGAGAGAGGGATAA      CCAGACCAATAA GTAGGCATT TTATTGATCTGG      TCTCTAACAATCTAA  66 41
        uspE 2161479 .. 2161490 -    -3  -3.58329   TAAAGACGCCGTAAA                TACA TCCA TGTA                 GGCTCGAGCCGCGCC  51 178
ISU54_RS09425 2156864 .. 2156882 -  -9.5  -4.33785   ACACGGATAAAAGAA             GGGCAGC ACTTG GCCGCCC             TTAAGATAATTATTT  88 35
ISU54_RS09420 2154960 .. 2154982 -   -12    -3.646   CTGAATTAGAGAGAA           CGCCGCAAGC TCA GCTTACGGCA           TTGGCGCTGCAAGTA  82 274
        rstA NONE
        rstB 2152382 .. 2152403 -    -3  -3.45571   TTCGCGAAATAGCAA           GTGCAC GAAATAGTAA GTGCAC            GAAATTAGTAAGTTC  49 66
ISU54_RS09400 2150809 .. 2150827 -   -16   -4.8048   GGCGCATATGAAAAA             CCTCCGGC TAT GCCGGAGG             ATATTTATTTCCGAA 100 48
ISU54_RS09390 NONE
ISU54_RS09385 2148097 .. 2148116 -  -2.2  -2.81815   CCTAATCACTAATTA            GTGACAGTA GAA TACC-TCAC            TGGCTTTATTATATG  41 355
         hns 2146274 .. 2146297 - -15.4  -5.88197   TGAAAGACAAAAAAA          CACCCTCCTA TTAA TAGGAGGGTG           TTTCGATAGTAATAG 100 58
ISU54_RS09360 NONE
        purU 2140117 .. 2140128 -  -3.6  -4.02022   TGGAAGGACTATAAA                GCCG TCAC CAGC                 GGTTTGAAAATGGTG  59 372
ISU54_RS09345 NONE
ISU54_RS09340 NONE
ISU54_RS09335 2138092 .. 2138117 -  -7.1  -4.03137   ATATAATTAATGAAA         GTGAAG-ATATT ATA AATATTCTTCAC         AGTAATGTTTGGTTA  69 503
        xthA NONE
ISU54_RS09320 2135309 .. 2135332 -  -7.4  -3.38361   AAACCGTAACACGAA          CAACAACCCG TGCA CGCGTTGCTG           TGTTTATCAAAATCA  62 165
        sppA 2129315 .. 2129336 - -14.5   -4.7497   CTCAGCGAGGAAAAA           CAGCCCGAT GGGT ATCGGGCTG            AATATCTATCTGTAT 100 54
        ansA NONE
        pncA 2127530 .. 2127551 -   -13  -5.47159   TCTGAATACAAAAAA           TGGGCGCC GAGGCA GGCGCCCA            TTTTTGCGCAGAAAG 100 44
        gapA 2125293 .. 2125310 - -11.3  -5.05116   CTATAAACAAGAAAA             GCCACTC GCGT GAGTGGC              TTTAGGTAGAAATCT 100 52
ISU54_RS09265 2124105 .. 2124121 - -13.7  -2.78495   CTATGAGCAAGACCA              TGGGGCC AAA GGCCCCA              TTTTTATATTGACCG  93 52
        yeaG NONE
ISU54_RS09250 2119474 .. 2119512 -  -5.3   -4.9792   TAGCCCATAGAAAAA   GCCGGAAAATGCTTTCT GAACA AGAAAAAATTAACCGGC   TGATATTGCTGCTAA  78 37
ISU54_RS09245 2118109 .. 2118122 -  -3.1  -2.80344   TGGTGACGGAACAAC               TG-GCC GAA GGCACA               TTAGTTCGCCTATTG  41 201
ISU54_RS09235 2116229 .. 2116265 - -15.4   -5.5112   CTCATCAATAAAAAA    TGCTATTACCTGCCCA GAGGG TAGACAGGTAATAGCA    GACAGGTAATGGCGG 100 51
ISU54_RS09230 2114774 .. 2114826 -  -5.7  -3.09878   TTCAGCCACTGAATA TTGCCCCGTTACACGATATTCAC CCCATCC GTTAATATCGTGTAACGCGATTA TTTGCCGTTGTTAGT  55 23
ISU54_RS09220 2111307 .. 2111323 -  -7.9  -3.43261   AAGCAGAAAAGCGAA              GGGGCGT TTA ATGCCCC              TGAGGTTATTGACAA  68 205
        dsbB 2107938 .. 2107956 - -11.7  -4.98522   AATCTGATATAAAAA             TGGCGCC AGAGA GGCGCCA             TTGATAATAAAGATA 100 51
ISU54_RS09195 NONE
ISU54_RS09190 NONE
ISU54_RS09185 2102758 .. 2102809 -  -2.4  -5.04385   TACAGTCTCAAAAAA TTACCGCAAACCGATGTTACTACGT GTC AAGTAGCGAG-TCATTTTGCGGTAA TACTCTGTTTAAACC  68 201
ISU54_RS09180 2101112 .. 2101122 -    -4  -3.55368   ATGCAAGCGATAGAA                 TAGA GAT TCTA                 AAAGACAGAATTGAG  52 375
ISU54_RS09155 2095212 .. 2095245 - -13.3  -3.14125   GTCAGACATGCAACA     GCAGATCACTAGCATC CAA GAGGC-AGTGATCTGC     TATCAAGATTTAAAC  81 69
ISU54_RS09120 2091571 .. 2091584 -  -9.5  -4.43037   CGAATAAAAACTAAA               CCCGC TCCG GCGGG                TTTTTGCATTCTAGC  95 68
ISU54_RS08980 2069119 .. 2069144 -  -5.4   -3.4071   AATAATCACGCATAA         CCATATCGAG CAAGTC CTCGGCATGG          TCGCCCTCATTGGTG  57 335
ISU54_RS08970 2068842 .. 2068861 -  -4.4  -3.36515   TCTTATTGTGAAATA            TTCTTTAC GATC GTAAAAAA             CTGAATATCATGATA  51 73
ISU54_RS08935 2064709 .. 2064724 -  -4.6  -4.37092   AGGGCCGTTATAAAA              CGACGC TTCA GCGTGG               AGTAATGGCCCCCCG  66 491
ISU54_RS08920 2061609 .. 2061622 -  -2.3  -4.43012   AGCTCAATATTAAAA               CCTGC CAAT GCAGT                AACTATGAGCGTCGC  60 316
        minC NONE
        minD NONE
        minE 2056552 .. 2056583 - -17.5  -3.43117   ACAGTCAATTGAGAA      TAACGCCCCTGTA AATAAA TACAGGGGCGTTA       TTGAGAAGAAATCAT 100 37
ISU54_RS08870 2052605 .. 2052624 -    -5  -3.86897   GCGACCGGTTACAAA            CGCTG-GCA TAT TGCTCAGCA            AGTGATAATACCGCC  61 147
ISU54_RS08850 2048742 .. 2048769 -  -9.8  -2.52015   GCCAGAGGCAGTAAG        CGGAGGGTAGCC TGGC GGCTACTCTCCT         TTGTTTTTGTGGCTT  70 110
ISU54_RS08825 2043370 .. 2043390 -  -5.4  -4.07687   ATGGTGTTGTTAAAA            CAGCGGAT AATGG ATCCGATG            GTAAAATGTCATTAA  65 294
         pyk 2041642 .. 2041663 - -15.9  -4.36595   CAGTTAAAGGTAAAA           GGCCCGCTA GTGA TAGCGGGCC            TGAGGTTATTGACAA 100 249
        znuC NONE
        znuB 2036352 .. 2036399 - -15.7  -3.56318   TCGGGAAGAATAATA CGTTTCACGCTGTGGGGGTTA TAGGCC TAAACCCCACAGCGTGAAGTG ATGACTATCCTCGTG 100 30
ISU54_RS08755 NONE
ISU54_RS08750 2027992 .. 2028008 - -10.8  -4.46072   GGGAATAAACATAAA              GGCGGC GATAT GCCGCC              CAGACTAACGGTTGC 100 85
        cmoA 2027070 .. 2027080 -    -4  -2.80589   TAAAAATCGCCAAAT                 TCAA TCA TTGA                 GCCTCTCCTGCTTTC  46 19
        cmoB 2025638 .. 2025654 -  -9.5  -2.60496   GCTCTGTTGAAAGAT              TTGGTTG CAG CAACCAA              GGATCAAGGCCCGAT  65 477
        argS 2021597 .. 2021607 -  -5.4  -2.80816   TCGGTATTGATGAGA                 CGAA TAT TTCG                 GTAAAAGGGACCACC  48 403
        mdtH 2009265 .. 2009312 - -10.8  -3.14931   CGTATGCGCGAGGAA TGT-GCTTATCAACCGGAAAGGC AAA ACGTCTCCGGTTGATAAGGGACA TAACGTTAGCTGCTG  79 31
ISU54_RS08690 2008266 .. 2008277 -    -3  -4.36914   TTTTTGGTCATAAAA                TGAA TAGA TTCA                 TCGGGATGCTTTCGC  61 108
ISU54_RS08675 2006165 .. 2006183 -  -8.1  -5.80951   ATGCAAAAGAAAAAA             CCCAACC ATAAA GGTCGGG             GTTTATTATTTGGCG 100 36
ISU54_RS08650 NONE
ISU54_RS08645 NONE
ISU54_RS08640 2000295 .. 2000306 -  -3.6  -3.04715   TATCTCCTGTAAAAT                CAGG CTTT CCCG                 GTGGACTGTGACAGA  46 13
ISU54_RS08635 1999076 .. 1999104 - -10.3  -2.87564   TCATTCGCTGATACA        GTCGCCGTTTCGT CGA ACAATACAGCGAC        TGTACCCGCCAAGGA  75 113
ISU54_RS08630 1998020 .. 1998034 -   -10  -3.18452   ATTAGGTGAATTTAA               CGCCAA TTT TTGGCG               GTGGCGGGGGAGTCA  74 7
ISU54_RS08625 1997750 .. 1997771 -  -6.5  -6.23209   GTAACCAAAAAAAAA           GGCCCCGAC TTTC GTCAGAACC            TTATTTTTGAATTTG 100 39
        dauA 1995016 .. 1995039 -   -11  -5.46657   TAGGGCAATAAAAAA          GGCAGCGTAG GCAA CTAAGCTGCC           TCAGACTGCTGACAA 100 237
        lolB NONE
        ispE 1987329 .. 1987342 -  -3.9  -3.48593   CATGCGTCCAGAGAA               GATAT TGTC ATATC                AGTAATCAGGGGCGA  51 322
         prs 1986186 .. 1986211 -  -8.9  -4.98672   TTCAAAAACAGAAAA         CCCGTTGTCGC ACAG GCTTCAACGGG          TTTTTCTTTATCTGC 100 165
         pth 1984790 .. 1984815 -  -3.3   -4.8384   TAAATAACTTAAAAA         TCAACCCGTTA AGTT TAGCGAATTGA          TGTAATCAAAATTTA  68 135
        ychF 1983590 .. 1983607 - -11.3  -5.50723   CTATGAAAACAAAAA             TCCACGC AATT GCGTGGA              TTTTATAGCATTTTT 100 88
ISU54_RS08535 1978640 .. 1978656 -  -3.6  -3.04398   TTTTTTCTGTAAAAT              CTGGCG TATTT CGCCAT              TTTCTCTTCTGGCGA  46 491
ISU54_RS08515 NONE
ISU54_RS08510 1973783 .. 1973801 - -10.3  -4.22676   AGCAAGAAAGAAGAA             GAGGAGG GAGAT CCTCCTC             TTAAACCTGTATGCA  91 126
ISU54_RS08505 NONE
ISU54_RS08500 NONE
ISU54_RS08495 1971357 .. 1971384 -  -8.4  -2.90888   ACGAGTATATAAGCA        GTAGTGGAGCCG TCAA CGACCCCACTAA         TTTTTTATTACTGAA  65 33
ISU54_RS08490 NONE
ISU54_RS08485 NONE
ISU54_RS08480 1967809 .. 1967827 -  -9.6  -2.78695   TTGAGATAAAGTAAT             CCGCTAAC TAT ATTAGCGG             GGTTTTGGACTCATG  70 19
ISU54_RS08475 1967515 .. 1967544 -  -8.5  -4.57353   GGCTATTAGATAAAA       GCCGGGTGTGA-GA AGA CCGCCACTCCCGGC       TTGAGTCACTAAGTT  87 113
ISU54_RS08470 1966771 .. 1966782 -    -3  -4.40478   CAAATAGAAAAAACA                CATA ACCA TATG                 GATTTCATGGGAAAT  61 43
ISU54_RS08465 1965810 .. 1965822 -  -6.9  -4.08767   CTGAGTTGGTGAAAA                CCGCC GTT AGCGG                TGCACGTTTCCAGCA  69 239
ISU54_RS08450 1960123 .. 1960155 -  -3.4  -2.53164   TTATCCATGATCAAT      TTTATGAGGTCTGA TTAAT CCAGACCCCATTAT      TAAAATTATTTACTT  42 35
ISU54_RS08440 1957001 .. 1957023 -  -6.3  -4.65933   CATCTTTAAAAGAAA           GCAGACAAC ATTTA ATTGCCTGC           TCCTCAATATTGCCA  77 62
ISU54_RS08435 1956237 .. 1956247 -  -5.4  -4.19238   TGGCGAATGCCAAAA                 CTCA GAT TGAG                 CAGTTAACTGCCCGT  65 204
ISU54_RS08385 1945234 .. 1945247 -  -5.3   -2.8459   TACAGAAACACATCA               GTTGA AGGC TCAAC                AGGGTTGCTGGTGGC  48 301
        hutC 1942417 .. 1942439 -  -7.1   -3.9009   AACCTAGCCTATAAA           TTCACTATC AGCAA GATAGCGAA           TTCACAATTGCGTAA  70 74
ISU54_RS08365 NONE
        hutG 1940101 .. 1940118 -  -8.3   -4.3207   ATAGAAAGATAGAAA             GGCGGGG GAAA CCCCGTC              TTTTTACTGTGAGCT  82 168
ISU54_RS08305 NONE
        narX 1925320 .. 1925334 -  -8.5  -3.74693   CTTTACTGTATTAAA               CGGGC ATTAG GCCCG               GTTAACGATAAATAA  75 523
        chaA 1924139 .. 1924163 - -14.3  -5.48787   AGAATACACAAAAAA          GGGCAAGCGTT AAC AGCGCTTGCCC          TTTGCTATTCAGACG 100 45
ISU54_RS08185 1898037 .. 1898048 -  -4.4  -3.07029   TAAACAGGCTTAATA                TGTC TAAG GACA                 TCAATGGTGAATGGA  47 245
        ansP 1895963 .. 1895998 -  -6.2   -2.9268   ATTATAAAAATCAAT    CCAGCCTGTAGG TGTAATAACTGG CCTACAGGCTGC     TACAGCATGACAACC  56 44
        nqrE 1893648 .. 1893661 -  -2.4  -3.89524   ATTCTAGTTTAGAAA               GAAG AAATGA CTTC                TGAGCCGCATTGTCT  51 74
ISU54_RS08160 NONE
ISU54_RS08155 1890127 .. 1890143 -  -2.3  -3.64357   TTAGAAGCATAAATA              TCAGA GAAACAG TCTGA              TGCTCATGGCCATAA  49 49
ISU54_RS08150 NONE
ISU54_RS08145 1888873 .. 1888885 -  -3.3  -5.03145   CAATCGGTTAAAAAA                CGCCC CAA GAGCA                AAATTATTGGCTATC  71 29
ISU54_RS08135 1886963 .. 1886973 -  -5.4  -3.13728   ATCAGCGACAGTGAA                 GTGT AAA ACAC                 CGTTAAATCAATAGA  53 51
ISU54_RS08130 NONE
ISU54_RS08125 1884812 .. 1884825 -  -2.3   -4.2354   TAAATGGGAAAATAA               CGCCA AAAA TGGTG                ATGTTTTTACGCTTT  55 262
ISU54_RS08120 1883522 .. 1883546 - -12.2  -2.52491   TAGAGACGCATGAAG          CTGCCCGCTA ATCAG TAGCAGGCAG          TAGAGTACGGTACGT  81 83
ISU54_RS08115 1879600 .. 1879616 -  -5.8  -5.95166   CTGAATCAAAAAAAA              CGCCAA GAAGA CTGGCG              CTTTTAATAGGGGAA 100 187
ISU54_RS08110 1878680 .. 1878699 -  -2.1  -3.14132   TCTCTGGTCCATTAA           GGCC--CCG TTAC CGGTTGGCC            GACATATTCATGAAA  43 62
ISU54_RS08105 1877940 .. 1877950 -  -3.2  -2.77658   CATGAGAGCCAAGGA                 GCGA TTC TCAC                 CAGTGTTCCCAGTGT  43 74
ISU54_RS08100 1875277 .. 1875290 -  -2.3  -2.84229   ACACGCTCATTAAAC               GGCAG AATA CTGGC                CTATTCTGGTTGAAT  41 94
ISU54_RS08095 NONE
ISU54_RS08090 1872956 .. 1872967 -  -4.4  -3.35278   TGAACTACAGAGGAA                TCGT GTGA ACGA                 GGCGAATAATAGCGG  51 315
ISU54_RS08085 1872745 .. 1872756 -  -2.2  -3.38316   CCATTATCGAACTAA                CCTG ACCC CAGA                 TTTGACCACCAATTT  45 148
ISU54_RS08080 1871401 .. 1871419 - -14.6  -3.60814   AAAGTCTATATAGAA             CCACCTCC TGT GGAGGTGG             TGGTAATTTGCCAGA 100 61
        ybtA 1863876 .. 1863906 - -21.3  -3.93658   AACAGGCGGAAAGAA       CAGAGGCCCGGAT GGGGT ATCCGGGCCTCTG       TCAGGGAGGAGTTTA 100 58
        irp2 1857588 .. 1857618 - -10.5  -3.33711   GATTCACAAAGTCAA      TGGAACGCCAT-GC GTTC GCGATGGCGTTCCG       GGGAAAATCAGTTTG  78 48
        irp1 NONE
        ybtU NONE
        ybtT NONE
        ybtE 1844474 .. 1844486 -  -6.9  -3.02144   TGAGTCCCTGTAAGA                CGGCG AAA CGCCA                AAAATACCGACAATG  58 123
        fyuA 1842400 .. 1842420 - -11.2  -4.08945   ACTAGTGGTGTAAAA            GGGATACC TTTTC GGTATCCC            TTTTACAATAATCAG  93 37
ISU54_RS08015 1840591 .. 1840603 -  -4.8  -4.21676   ATAAGGGATGCAAAA                CCCT TATTT AGGG                TTGTCGGCCATTACA  63 54
ISU54_RS08010 1840154 .. 1840174 -  -3.4  -3.15758   ATAAGTGCTCAGTAA           TTCAGCTGA ATAT TCAG-TGAA            TGGTATAGTGTCATA  46 158
ISU54_RS08005 NONE
ISU54_RS08000 1839305 .. 1839330 - -10.5  -4.34402   TGGTGCATATTAAAA         TGTGCGGAG CTATTCTC CTCCGCACA          TACAGATTTAACGTC 100 33
ISU54_RS07995 1838625 .. 1838640 -  -4.6  -4.37092   AGGGCCGTTATAAAA              CGACGC TTCA GCGTGG               AGTAATGGCCCCCCG  66 367
ISU54_RS07980 NONE
ISU54_RS07975 1836168 .. 1836183 -  -3.2  -4.30719   CTGTTTGACAACAAA              GGCG TTGCTTTC CGCC               GCACTGCATCGGCAG  61 76
ISU54_RS07930 NONE
ISU54_RS07925 1827460 .. 1827489 - -11.7  -3.31428   TTTAAATACAATAGA       TAGCTCTGATTGAG TTA CT-AATCAGAGCTA       CTGAGTACCTGTTTG  86 117
ISU54_RS07900 NONE
ISU54_RS07895 1823520 .. 1823535 -  -3.2  -3.45324   GACGTTTACCAAACA              GCGG CAGCACAC CCGC               GATTTTATTGTTAAT  49 36
ISU54_RS07890 1822753 .. 1822768 -  -3.3  -4.89233   TACCAACACCAAAAA              TACTC AAAGGG GAGTA               GTGAGCATTGTTAAC  68 499
ISU54_RS07875 NONE
         hcp 1819395 .. 1819407 -  -3.5  -3.07192   AACGTTGCTAATACA                TAAAT GAT ATTTA                CTTGAATGCATGGGC  48 219
ISU54_RS07850 1816857 .. 1816877 - -10.5  -2.90714   TGAAATCGGTAGACA            CAAGGGATT TAA AATCCCTCG            GCTTATGGCTGTGCG  70 206
ISU54_RS07815 1812475 .. 1812494 -  -4.9  -3.33509   GCTCAAAGAAGTGAA            GGGGCCA CTATGC TGGCCCT             AGGCGTTATTGGCGG  53 31
ISU54_RS07810 1811886 .. 1811897 -  -4.4  -3.24516   TAAAATCAGGAAAAT                TCAG GTGA CTGA                 GGCGATATCTGCTGA  50 159
        cycA 1808273 .. 1808307 - -17.4  -3.59738   GATTAGAGGGGGAAA     TAAAACGGTACCAGAA CAC CTCTGGCACCGTTTTA     TCACACTGTGGTTAT 100 37
        wrbA 1805943 .. 1805965 -  -7.7  -3.42437   GAAGCTTAAAATACA          GCACCGC-CA TCAT CGCGCGGTGC           TTTTTATGACGTCTA  68 82
        putA 1796167 .. 1796180 -  -9.5  -4.07568   TGTTGGTTGGCAAAA               GGCCC CGAA GGGCC                TTAATTGATAAACCG  83 98
ISU54_RS07745 NONE
ISU54_RS07740 1794842 .. 1794868 - -10.1  -3.82218   AGGCAGAGGAGTAAA        GCGTCCGCGCCA AGGA TGGCGCGG-CTC         GAGCCTACATGGATG  84 240
        fliD NONE
        fliS NONE
        fliT 1785550 .. 1785563 -  -3.1  -5.46657   TATTTTAATAAAAAA               CTTAC CATA GCAAG                CCACTTCGACTATAA  82 234
ISU54_RS07685 1784419 .. 1784430 -  -5.8  -4.40561   CGGCCTTAAAAAGAA                CGCT TTAA AGCG                 CAAAATATCTAAAAG  70 191
ISU54_RS07680 NONE
ISU54_RS07675 1781199 .. 1781223 -  -2.8  -3.92276   ATGACAGATAAAATA         CG-TACTGACC AGGA GGCCGGTAGCG          ATTAAGCATAGCGTG  54 89
ISU54_RS07670 1780349 .. 1780364 -  -6.1   -3.3382   CGTATGAGATATCAA              CCCAC TTAGCT GTGGG               TTTTTGCGTTATCTT  59 176
        fliF NONE
        fliG NONE
        fliH NONE
        fliI 1773724 .. 1773734 -  -4.6  -3.63515   GCTCAGCCTTAATAA                 CGAC TTA GCCG                 GGAAATAAACGAAAC  57 43
        fliJ NONE
ISU54_RS07620 NONE
        fliL 1771120 .. 1771142 -  -3.4   -2.8294   TATCGCCCATAATGA           TTATCGCAAT ATG AATGCGGTAA           ACAGCACATCGCTGA  43 3
        fliM NONE
        fliN NONE
        fliO NONE
        fliP 1768284 .. 1768294 -  -2.4  -2.61735   TGAATACGCGATAAG                 CCAG TGA CGGG                 AGAGCACCCACCATC  40 74
        fliQ 1767957 .. 1767973 -  -4.3  -3.72576   TTGGTGGGTATCAAA              GGACAGC ATG GCTAGCC              AATCAACGTGGGCAG  54 20
        fliR NONE
ISU54_RS07580 1766774 .. 1766789 -  -8.2  -3.01712   CTGCGTTGCTTAATA              GCACCC TAGA GGGCGC               TTTGTTAACTAAGGT  65 30
ISU54_RS07575 1766279 .. 1766296 -  -8.3  -4.41548   CGAGAGGTCAGAAAA             GGGGGGG TAAA CCCCGCC              GAAACGGGGCGATAA  87 59
ISU54_RS07540 1756475 .. 1756485 -    -4  -5.40072   TGCTGCGGAAAAAAA                 TATC TTT GATA                 CCATTGATACGGTAC  85 404
        flgA 1744966 .. 1745024 -  -4.1     -3.94   TTAACCTGCAAATAA CGGCTTATGTTAATTATCGGCAAAGGTT AAAA AAACTTTAACGACTAT-AACATAATCCG AATTGTGCCATCGTC  59 11
        flgM NONE
ISU54_RS07470 1744017 .. 1744047 -   -17  -3.51161   CAAACGTCCAGAGAA       CAACGCCGCTCA GGTTAAT TGAGCGGCGTTG       TTTTTTTAAAAGGAT 100 76
ISU54_RS07435 NONE
ISU54_RS07430 1734636 .. 1734653 -  -8.4  -3.89336   TTAACCAAAGCGAAA             CTGGGC AATTAA GCCCAG              CCTATTTCAGTCATA  75 32
ISU54_RS07405 1730704 .. 1730723 -  -4.9   -2.7094   TGTCAGCTACAGAAC            GCCTGGG ATTTAG CACAGGC             TTGGCCTGAAGCTGA  44 191
        purT 1722578 .. 1722605 -  -7.1  -5.04597   ATTGATAGATAAAAA        TAAACCCGC TGGCTGAATG GCGGGTTTA         TTTATTTGCTAGCGT  89 61
        pabB NONE
ISU54_RS07355 1720097 .. 1720112 - -11.8  -3.07962   TGTCACAGGTTAACA              GCCGCC AAAT GGCGGC               TTTATGAGTCAAATA  86 34
ISU54_RS07350 1717880 .. 1717898 -  -8.8  -4.82901   TTCCCTGCATAAAAA             TAGCCCTC CCT GGGGGCTA             GCCGCGCCATCCTTT 100 176
        hpaR 1707483 .. 1707522 -  -4.8  -3.03212   AAGAGTAAGCAGAGA  GTGGAACCTCAGGGGCGC TTCG GCTCCCCTGAGGTTATTG   ACAACGTACCCGCGA  50 80
        manX 1704288 .. 1704302 -  -4.2  -3.70405   GAGTAAAATAACCAA               GCCCCA AAA TAGGAC               AGGGTATTACCTTTC  54 60
ISU54_RS07280 NONE
ISU54_RS07275 1702508 .. 1702531 -  -8.8  -4.89567   GTCTAAAAGATAAAA          TAACCGGGAG CAAG CCCCCGGTTT           TGGATGAAGATAATC 100 48
ISU54_RS07270 1701691 .. 1701701 -  -3.2  -4.67943   CCTTAACATATAAAA                 TCGA ATG CCGA                 CAACCCCAAATACAA  65 217
        mntP 1700806 .. 1700836 - -19.8  -3.64703   GGTGCTTTACTGAAA       TCCCCCGGCGATTT GAT ATATCGCCGGGGGA       TTTCTCATTTATCGC 100 84
ISU54_RS07250 1695128 .. 1695139 -  -4.4  -3.86202   GCCTATGACATGAAA                CTCA CGGG TGAG                 CAGGGTTTTAATTTA  59 403
        pgeF 1693253 .. 1693268 -  -7.5  -4.56597   CGTTTGCTGTAAAAA              CCCGC CTTTGT GCGGG               TTTTTTCATATTTGG  78 81
        pagP 1691195 .. 1691227 -  -9.4  -3.33696   TTCGCCCTCAACCAA      GCATATAACCAT TTTAATATT ATGGTTATATGC      TGTTTTTTAGTTAAA  74 62
ISU54_RS07195 1686897 .. 1686911 -  -5.6  -4.19624   TATGTTGAATATAAA               TGCGTC AGT GCCGCA               GTATAATGCCTCCAT  68 456
ISU54_RS07185 1685946 .. 1685966 -  -5.4  -2.74012   TCATCAGCGTAATGA            TGCACAAC TTATT GATGTGCA            GAACTGTTATAAAGA  50 129
ISU54_RS07175 NONE
ISU54_RS07170 NONE
ISU54_RS07165 1681889 .. 1681910 -  -2.3  -4.29738   CCACATGCATTAAAA           GAGAG-AACA GTA CGTTTCCCTC           AATCTGAACTTATCA  58 90
        mtfA 1680700 .. 1680714 -  -5.6   -2.8005   AAATAGAGGGTAAAT               CGCAAC AAC GTAGCG               CCAGCCCAAGGTTTT  53 84
ISU54_RS07155 1680485 .. 1680508 - -11.8  -5.15526   ATAGAAAAGCAAAAA          TCCCGCTTAG TTTC CTAAACGGGA           TTTTCTAAATTTGGC 100 37
ISU54_RS07125 NONE
ISU54_RS07120 1672183 .. 1672202 - -12.8  -2.94322   ATTGGACGCAAAGTA            GGCCGCCA TAAA CGGCGGCC             TGAGGTTAATTTACG  95 31
ISU54_RS07115 NONE
ISU54_RS07105 1669556 .. 1669582 - -10.3  -2.73875   CGTTGGGTAATATCA         GCGGTATTAAA AATAA TTCAATACCGC         CGGATGGATGTTATT  75 36
ISU54_RS07100 NONE
ISU54_RS07095 1667607 .. 1667641 -  -6.5  -3.51924   CCGTGATTCAGATAA     TAATGAACCGGGC TAATCAGAC ACCCGGTTCCTTA     ACCCTCCCCTTAACC  61 35
ISU54_RS07090 1666654 .. 1666712 - -16.3  -2.81072   GCGAGGTAACAGAAT CCTCAGC-GCCTAAATACCGTCTTGCCAA CTA TCGGCAAG-CGGTATTTAGGCCGCAAATG GTTTGCCCGACTTCA 100 77
ISU54_RS07085 1666209 .. 1666232 -   -11  -4.81851   ACTGAAATGCAAAAA          CCCTGCTTAG TTAC CTAGGCAGGG           TTCTTTAATTTGGCT 100 36
ISU54_RS07070 NONE
ISU54_RS07065 NONE
        argG 1658513 .. 1658540 - -14.2  -2.67747   CTGTGACACGAGAAG        GGTTAAGGGGGG GAAG CTCCCCTTAACC         GCTTGGGGTCGCGCA  95 105
ISU54_RS07030 1652816 .. 1652844 -  -2.3  -3.57627   TGCCGATAGAAAAAC        CCATCGCCGTAAC CCG ATTGCGACGCTGA        ATTTGGTTGTCGCGG  47 384
ISU54_RS07020 1647355 .. 1647366 -  -3.6  -4.02022   TGGAAGGACTATAAA                GCCG TCAC CAGC                 GGTTTGAAAATGGTG  59 372
        sbcB 1642458 .. 1642469 -  -4.4  -4.84761   AGATGCTGACAAAAA                GAAC TTAA GTTC                 ACTGCCGCACAGGCA  71 144
ISU54_RS06980 NONE
ISU54_RS06975 NONE
ISU54_RS06970 1635969 .. 1635994 -  -4.8  -3.68435   CTGTTGAAAATAACA         GGAATCGGAAC ATGAA ATTCCG-TTCC         ATAGCGTTGCATGGC  57 123
ISU54_RS06965 NONE
ISU54_RS06960 1635352 .. 1635383 -  -7.2  -2.72739   GGCAACTGAGAGAAT      CCCCAGAAGCTTAC ACAG GTAAGTGACTGGGG       TGAACGAGGACAGCC  58 55
        hisL 1633911 .. 1633937 -   -21  -5.52023   ATGAGCAATAAAAAA         GCCCTCGGAAGA TTA TCTTCCGAGGGC         TCTCTACTGCGTTCT 100 71
        hisG NONE
        hisD NONE
        hisC NONE
        hisB NONE
        hisH NONE
        hisA NONE
        hisF NONE
ISU54_RS06910 1626524 .. 1626548 -  -8.6  -5.06414   GCTGCCCAATAAAAA          CGCCTCCA GTGATAAGT TGGAGGCG          TTTTTTTGCCAGTGA 100 54
ISU54_RS06885 1617438 .. 1617459 -  -8.7  -3.39908   CGTTGGCAAAAGATA           CAGCCGG AAAAGTGG CCGGCTG            TGAGGGTATCCAACT  71 48
ISU54_RS06880 NONE
ISU54_RS06875 NONE
ISU54_RS06870 NONE
ISU54_RS06865 1613199 .. 1613212 -  -8.1  -3.96469   ACAGCTCAACAATAA               CCAGC ACAT GCTGG                ATTTAGCTGACCCTG  72 217
ISU54_RS06835 1604922 .. 1604955 -   -14  -3.38522   TAGGTAGTGGAAAGA     GA-TAGGCCCGATGG TTTCT CCACCGGGCCTAATC     ATTTATTTTTCCAGG 100 80
        metG 1597763 .. 1597781 -   -16   -4.8048   GGCGCATATGAAAAA             CCTCCGGC TAT GCCGGAGG             ATATTTATTTCTTTA 100 90
ISU54_RS06795 NONE
ISU54_RS06790 1593124 .. 1593147 - -12.4   -3.1506   AAATTTTTGCAGGAA          GCAGTTCGGC CAGA GCCGATCTGC           TATTATTTTCTAGTT  93 177
ISU54_RS06785 1591621 .. 1591633 -  -3.4  -3.19117   ATCACACTATGAATA                GCAT TAATG ATGC                AATGACACTCACGGT  46 177
ISU54_RS06780 NONE
ISU54_RS06775 1590409 .. 1590433 -  -9.3  -2.98729   GATAAGGATTACAGA          CCCTGACGT CGCTATC ACGCCAGGG          GAAAGTGGGTTCAAC  71 36
         cdd 1588954 .. 1588965 -    -3  -2.67903   AAAATATGTACAGCA                TTTG TTAG CAAA                 TTATGACAATTGCCC  42 294
ISU54_RS06765 1587021 .. 1587034 -  -3.9  -4.06182   TTATTTATAAAAACA               CTTTA TTGA TAAAG                GTGATTCATTAATAA  58 172
        sanA 1585874 .. 1585900 - -13.1  -4.68846   AGGAATAAAGTAAAA        GCCAGTCAGGGC GATA GCCCT-ACTGGC         TGAAGTTAATGACAA 100 288
ISU54_RS06725 NONE
ISU54_RS06720 NONE
        fghA 1574645 .. 1574658 -  -8.1  -5.10461   TCTATCGAATAAAAA               GCCCT CGAA AGGGC                TTGGGGTTTTATGTG  95 65
      darA-c 1574135 .. 1574150 -    -4  -2.83903   TCGTTTAAAAATTCA              CTCGTA AGCA TACAAG               AATATCTCACTGGGA  46 104
        darB NONE
        darC NONE
        darD NONE
        darE 1568507 .. 1568536 -  -9.3  -3.11687   TGAATCATGAGGCAA       CGTTGACGCCATA ATGA TGTGGCTTCAACG        AATATCTGCCAGATA  72 20
        moeA 1566722 .. 1566740 -  -3.1  -3.06815   AGTTCCGGCAACATA             TCAACCT CCGAC AGGGTGA             TGAATGGCAAACGGT  44 7
        moeB 1565915 .. 1565936 -  -6.6  -3.05596   GATTTTTTTATTCAA           CTGGGG-AG TATTT CTGCCCCAG           TTTAATGTATTCATT  58 39
ISU54_RS06675 1564567 .. 1564579 -  -7.7   -5.5762   AGCAAATATAAAAAA                GACAG AGC CTGTC                CATAATTCTGTGTAA 100 52
ISU54_RS06660 1560681 .. 1560712 - -12.3  -2.97613   TATTAATTAATGATA      GCGCTCACAGCGGG GTGAT CCTGCTG-GAGCGC      GACCTTTAAACTGTA  93 93
ISU54_RS06480 NONE
ISU54_RS06475 1513675 .. 1513694 - -10.6  -4.08064   AAGTTCGCCGTAAAA            CCCCGTCC TTCA GGGCGGGG             AGATAAGGCGCTGAG  91 48
        tusE 1509548 .. 1509569 -  -9.5  -3.33162   GATGGTAGCGTAGAA           GTGG-TTGCC AGC GGCAATCCAC           AAGCAGTTGAACGTC  70 199
        rlmI 1508137 .. 1508147 -  -2.4  -2.66733   TTTCAAGTTACATTA                 CCCG ACA CGCG                 AACCCTTTTAGATAT  40 7
        hspQ 1507677 .. 1507707 -  -9.7  -5.00616   GGGCTTTCTAAAAAA       GCACCCTGTCAGC GTGCT GCTCACAGGGTGG       CGAACCTGGCAATCA 100 69
ISU54_RS06430 1506070 .. 1506087 -  -2.7  -3.15249   GATATCCTTCAGTAA             TAGCCAA TTGG TTTGCTA              ACAGATTACTGAAAG  44 168
ISU54_RS06425 1505558 .. 1505578 - -16.9  -3.92592   ATGCTCAATACTAAA            CCCGGTGGT TGA ACCACCGGG            TGAGTTACCTATTTT 100 34
ISU54_RS06415 1502826 .. 1502838 -  -4.1  -3.75763   CTAAAACAGAAAAAC                TCAGT GTT ACCGA                TGCTGGCGTTGAGCA  57 19
        yccS 1500636 .. 1500654 - -11.7  -2.63747   ATGAAACCGTATAAT             GGGCCAC GATGG GTGGCCC             TTGGGTACCTTAGGC  80 35
        sulA 1498868 .. 1498878 -  -5.4  -2.80438   CCAAATAGGCAATGA                 GCTT TAA AAGC                 TAAGCCCTTGGTTAA  50 339
        ompA 1497735 .. 1497751 - -11.5  -5.60993   CTGGGCACAAAAAAA              CCCCGCA TAG CGCGGGG              TTTTTCACGAAAGAA 100 47
ISU54_RS06390 1497020 .. 1497052 - -11.3  -4.04149   GAATCACAGGATAAA      TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA      TATGCGCCTATAAGG 100 99
ISU54_RS06380 1494511 .. 1494526 -    -9    -3.224   GAAGTGCGCAGAATA              GCGTAC AGCT GTACGC               TGAGCAAGTCCGATT  69 39
        fabA 1493896 .. 1493926 -  -8.5   -4.4521   ATCACGTAAAAACAA      TAAGGCG-ACATGA TTAA TCATATTCGCCTTA       TTTTACAATGCATTG  87 52
ISU54_RS06360 NONE
ISU54_RS06355 1490831 .. 1490843 -  -9.1  -3.61232   TGTTTGATAGAAACA                TGGCC AGC GGCCA                AATTCACTAAGAATG  75 246
ISU54_RS06310 1479565 .. 1479577 -  -7.7  -3.26204   AATTAAATTGAGCAA                TGAGC AGC GCTCA                GAATTGGTATTAAAT  61 378
        pncB 1472657 .. 1472671 -  -4.2   -3.7626   AGAAATAGTTAACAA               CCCAAT GAA ATGGGG               ATGTTGCTATGTTAC  57 342
        asnS 1471025 .. 1471055 -  -9.8  -5.09426   TCGAATTTTAAAAAA       TGATAAAAGCCAGC AGA GCTGGCTTTTATTT       GTACAAATTGACGTT 100 59
        ompF 1469643 .. 1469662 -   -10  -5.48623   AAATAGAAACAAAAA            GACAGAGC CGAG GCCCTGTC             TTTTTTCAACTTAGG 100 72
ISU54_RS06275 1468210 .. 1468221 -  -5.8  -2.72661   CAGCAGTCTGAAGGA                TGGC TTGG GCCA                 TCCTTTTATGGTCAG  52 66
ISU54_RS06270 1467939 .. 1467954 -  -4.6   -4.4261   TGTTCAATAGCAAAA              GATGCC GGAA GGCGTC               TTTTGTGTTCTCTTT  68 63
ISU54_RS06205 1450190 .. 1450206 -  -6.5  -3.44622   CATTGGCACAATTAA              GCCGG TTGACTT CCGGC              CCTCAAATTTTATTG  60 189
ISU54_RS06145 1432212 .. 1432223 -  -2.2   -4.4634   AACTGCAACAATAAA                TAGC GACA GCCA                 AAACGAAATAAACAA  60 278
        focA 1430904 .. 1430914 -  -2.4  -3.08211   ATTTCTCGAAAACCA                 GACG TAG CGGC                 CACACGTTAATGTTG  43 32
        pflB 1428529 .. 1428549 - -13.3   -4.3255   CTCTGAATGAATAAA            GGCCCCACA ATA TGTGGAGCC            TTTCATGTTGTAACA 100 59
        pflA 1425958 .. 1425996 - -11.2  -3.43033   TATCAATATATAAGA CAAC-GCCGCCA-GC-GGA TTCA TCCAGCATGGCGGCAGTTG  TTAGGCCAAACCTAA  83 99
ISU54_RS06115 NONE
ISU54_RS06110 1422917 .. 1422937 -  -5.4  -3.29471   TGGTTATCACATCAA            CAGTTGCC GACTT GGCAAGTG            GGGATGGTGAGCTCA  55 511
        trxB 1412520 .. 1412544 -  -9.2  -5.53079   AAAACAGATAAAAAA          GCGGGTGGCC CATGT AGCCACCCGT          ATAGAACGAGGTGAA 100 83
        cydD NONE
        cydC 1408590 .. 1408605 -    -4  -2.80816   TTTGCATCTATCACA              GCA-TGG TTG CCAATGC              GGCTATTTTCTTTGT  46 70
         aat NONE
        infA 1407253 .. 1407278 - -13.3  -4.36778   AAAGATAACGCAAAA         CGCCCTTGCCA TAAA TGGGAAGGGCG          CCGGAGGGGGACTAC 100 84
        cspD 1402832 .. 1402865 - -11.2  -4.63007   TAGAAGTAGATAAAA     TAAAAATGCCAGTC GTCATT GACTGGCATTTTGA      ATCAAAGTACAGGTA 100 128
ISU54_RS06020 1398136 .. 1398147 -  -2.2  -4.19238   CCGCGAATGCGAAAA                TGCA GCCA CGCA                 GGGTCATTGATAAAG  57 320
ISU54_RS06010 1395346 .. 1395358 -  -6.9  -4.44548   TATAGGGAAGGAAAA                GCCCC CAG AGGGC                GGGGGGGGGCGACTG  76 56
         hcp 1393486 .. 1393520 -   -10  -3.39288   CAGCGTGCAATAATA     GCCCGGTCAACGGC GAGAAAG GCGATTGACCAGGC     AAGGTATAATTAACT  76 40
         hcr NONE
        poxB 1390317 .. 1390328 -    -3  -3.58329   TAAAGACGCCGTAAA                TACA TCCA TGTA                 GTCTCGAGCCGCGCC  51 231
ISU54_RS05990 1390176 .. 1390187 -  -4.4  -2.73124   TGTCACTGCGTAAAT                CGAT CAGC ATCG                 TCTTCTCATTGGCTA  45 56
        ltaE 1389173 .. 1389187 -  -2.8  -3.14132   TTGTGGTGTCATGAA               TGTTGC TCG GCAATA               AATTCACGCCACAGC  44 4
ISU54_RS05980 1387625 .. 1387643 -  -4.6  -3.54424   TGCTAGCGCCTGAAA             CTATTCGC TGA GCAAATAA             GATGCCATTCTTCCG  55 61
ISU54_RS05975 1386561 .. 1386575 -  -3.6  -2.85459   GAGTTACAAGATAAC               CTAATA ACC CATTAG               CCGCGAAACTTACCG  45 22
ISU54_RS05970 1385811 .. 1385826 -  -2.5  -3.44848   TCTTCCTATCAAAGA              GGCCA GTATGT TGACC               ACTACGGTTGTCTGT  48 99
ISU54_RS05965 1385111 .. 1385139 -  -8.8  -3.89354   TTTGTAAATCAATAA        GTACCGGGCCAC GGGAA GGAACCCGGTAC        GAAAGATGTGTGGCC  78 56
        artP 1384145 .. 1384157 -  -2.7   -3.2632   AAATTCCCAAATAGA                TATCA ATG TGACA                GATAGCTGGCAAAAG  46 15
        artJ NONE
        artQ NONE
        artM NONE
ISU54_RS05940 1381455 .. 1381465 -  -3.2  -3.61398   TTTGTCGGTGAATAA                 GCTC ACG AAGC                 GCCATCACAATTATG  49 394
ISU54_RS05885 1372520 .. 1372541 -  -5.1  -2.56571   CAGAGACTCAATTGA           CCGGCATTG AAAT CAATGCTGA            AGCTATCGCCTGTGC  47 486
ISU54_RS05840 1364585 .. 1364601 - -12.3  -4.70887   CCAGCAATAAAGAAA              GGGTGTC TTG GACACCC              TTATCGGATAAATGC 100 66
ISU54_RS05835 1362401 .. 1362422 -  -2.1  -3.17392   TAGTCTTGAACCTAA           GAAGGCGGG ACTA CCGGGCTCC            TCAATATGGGGACAT  43 147
ISU54_RS05830 NONE
        ybjG 1360741 .. 1360765 - -15.1  -2.91264   GGGCGCATGGAGAGA          TTGCCGGTCAG AGA CTAACCGGCAA          GTGTGAAGCGAATAC 100 51
ISU54_RS05820 1359694 .. 1359721 - -11.4  -4.36554   CAGTACGATAATAAA        TAAGCCCGGT AATTGTGG ACCGGGCTTA         GACTACTGACAAAAT 100 166
        deoR 1358695 .. 1358708 -  -3.9  -4.83615   GATTCTGTATAAAAA               TAATC TATG GATTA                TTTGCCAACATAGCG  70 185
ISU54_RS05810 1356401 .. 1356428 - -14.2  -4.74161   AAAGAAGAAAAATAA        CAGGCTGGCC GTGGAAGT GGCCAGCCTG         GAGCGGTTAATCAAA 100 64
ISU54_RS05780 1349482 .. 1349523 -  -4.3  -4.14615   AGAAAACAGCACAAA TTTCCATGCCCGGTCACCG ATAT CGATAACCGTGCGAGTAAA  ATCATGGGCCTTCTA  61 82
ISU54_RS05775 1348801 .. 1348812 -  -4.4  -4.43307   TTTGGAATAAAAGAA                GAGT ATTA ACTC                 AAACCAATCGCAATC  66 19
ISU54_RS05740 1338312 .. 1338335 - -13.2  -3.75332   AGCGGTGAAGGGAAA          TAAGGGCCGC GGAT ACGGCCCTTA           AACGGTTTGTTTTAG 100 89
         nfo 1337037 .. 1337059 -  -9.8  -2.73635   CAAATCGGGGCAAAG           GCGCTGATGA CGA TCACCCGCGC           TAATGGCCAAACCAT  65 344
ISU54_RS05690 1326470 .. 1326493 -  -3.1  -3.53298   ATCACCTCAAACCAA          GGC-TCGAGC TACTT GCTCTACGCC          ATCGCCGCGCCCATT  49 345
ISU54_RS05655 NONE
ISU54_RS05650 NONE
ISU54_RS05645 1315570 .. 1315581 -  -4.4  -3.58305   AAGCAATGCGGGAAA                TGTG TCAT CACA                 CCCGTGAAGAGGCGT  54 150
         mtr 1313776 .. 1313788 -  -6.2  -2.95896   GCACTATTGATAAAC                CGGC AATAG GCCG                AACAAGGCTGAAATA  56 1
        yeiP 1312974 .. 1313004 -   -14  -3.69482   TCAGTGAAGAGATAA       CCGTTAAGGGCCGG TTT CCGGCTCTTAACGT       AGAGAGACCCAATAG 100 109
ISU54_RS05620 1309656 .. 1309688 - -15.1  -2.65161   AAACGCCAACAATAC      CGATGAGCTGAAT AGCCTTG ATTCAGCTCATCG      TCGTGTGTCTTAAGC 100 35
ISU54_RS05610 NONE
ISU54_RS05605 1305928 .. 1305943 -  -5.4  -4.25681   ATTTAACTGAATAAA              TGTGCA TGAA CGCACA               TTCTTTATCCAAAGC  68 342
        mepS 1305171 .. 1305187 -  -8.7   -5.4833   TGAGCCAATAAAAAA              CGCTGTC ATA AACAGCG              TTTCAACGTTTGGTT 100 72
ISU54_RS05595 1303018 .. 1303033 -  -4.8  -3.50447   CGAAGCTGCAGATAA              TCATTT TCTC AAATGA               AATTACCAGCTTACA  55 58
ISU54_RS05590 NONE
ISU54_RS05585 NONE
ISU54_RS05580 NONE
        yejF 1296979 .. 1296989 -  -6.8  -3.08471   TATAACTGTAGTTAA                 CGTG AGT CACG                 GTGGTGTTTTTGGTA  59 480
ISU54_RS05555 1291791 .. 1291802 -  -7.2  -3.05463   ATGCGGCTCAGGCAA                GGGC ATCG GCCC                 GCCGAAAACGCCCCT  61 6
        rplY 1291279 .. 1291297 -   -16   -4.8048   GGCGCATATGAAAAA             CCTCCGGC TAT GCCGGAGG             ATATTTATTTCGGCG 100 65
ISU54_RS05535 NONE
ISU54_RS05530 NONE
ISU54_RS05525 1287084 .. 1287117 - -13.3  -3.91144   GCCACACTCCACAAA     CGACAAAACCAACCC GAAT GGATTGGTTTTGTTG      AGGTATTTGGTCGGC 100 33
ISU54_RS05520 1286554 .. 1286589 - -12.1    -3.317   ATATATAAGCAAAAG    TATGTTGGTTCAGAT TGAACT AACTGAACCAACATA     AAAACCTCGCATGTG  89 128
ISU54_RS05515 NONE
ISU54_RS05510 1284658 .. 1284685 -  -7.2  -2.94637   ATAGAGATATTAAAT        TGATTATTCATA TTAT TCTGAATAATCA         CTACTGGACATTAGC  61 26
ISU54_RS05500 1283408 .. 1283421 -  -4.5  -4.84359   TTATGTCGATAAAAA               CGATG ATGG CACCG                GTACAATGGCGCGTT  74 228
ISU54_RS05385 1263269 .. 1263288 -    -3  -2.96444   TTCCTGAACAATAAG            TACTGTGAT AAT AT-ACAGTA            TTTGTGGGTGGCAGA  44 190
ISU54_RS05380 1262918 .. 1262928 -  -2.6  -5.66989   TAAAGATTAAAAAAA                 TTTT AAA AAAA                 TTAATTTCTCATTGA  84 102
        ycoA 1261668 .. 1261679 -  -4.4  -3.53012   TGGTTTTGGTTGAAA                GCAT TAAG ATGC                 AAAAATATGAGTAAA  52 244
ISU54_RS05370 1259430 .. 1259459 -  -5.1  -3.82378   ATGGATCCACAACAA       TCGGTGCAATTGT TTCA AAAATTACACCAA        CCGGTGACGATCCCG  61 255
ISU54_RS05360 1256637 .. 1256659 - -11.2  -4.93968   AGGGAGAAGCAAAAA           CCGCACTGGC GGG ACCGGTGCGG           TTTGTGGTCACGACC 100 50
        ampH 1255064 .. 1255088 -  -7.2  -4.90266   GGCACCAATTAAAAA          CCTGTTATCT GAATA AGATAACGGG          TTTTTGCTTTTCTCT  85 180
ISU54_RS05330 NONE
        rcsD NONE
ISU54_RS05320 NONE
        rcsB 1246998 .. 1247024 - -15.2  -3.83844   TTCATTAATTAATAA         GCCCAGTATTGC AGA GCAAAACTGGGC         TTGAGAGTCGAGCGG 100 49
ISU54_RS05300 1240211 .. 1240232 - -10.9  -3.27786   GGGAAAAGCCAGGAA           GAGCAGGTGC TTA GC-CCTGCTC           CCAGTGGGTTCTACG  81 47
        nrdA 1237445 .. 1237459 -  -2.8   -3.0353   CGTGGCATAAATAAC               GCCATC ATG GATAAC               CGGGGGTAAAAACTA  43 38
        nrdB NONE
ISU54_RS05285 NONE
         eco 1234982 .. 1234993 -  -5.8  -2.91383   ACTGGCAGTTACAGA                GTGC GGGA GCAC                 CACTGGTCGGCGGTG  52 406
        tyrP 1232251 .. 1232278 -   -15  -4.18018   TGGGCTGACGGAAAA        GGGCGCAT-TCCT ATC AGGATATGCGCCC        TTATTATTGCTTACG 100 43
ISU54_RS05260 1229633 .. 1229675 -  -6.5  -4.93318   GATAAGCCATAAAAA TACACCTCCAAATGTCAG GGGGTTAT CCAACATTTGG-GGTGCA GTTCAAAGGGGCTGA  84 47
       ompF2 1225983 .. 1226000 - -12.7   -5.0133   GAGTGGCGTAAAAAA             GCCGGGA ATAA TCCCGGC              ATAATAAATACATTC 100 89
        yedA NONE
ISU54_RS05240 1224392 .. 1224415 -  -3.1  -4.68908   GCCAGTCAAAAGAAA          CTGTCAGTC AAAAGA AACTGCCAG           CTAAAAGGGGATAAC  65 44
        sseA 1214161 .. 1214175 -  -7.1  -2.63596   GGTTATGTTACACCA               GCCAC GCTTG GTGGC               CGCTGGATGGTGCGG  52 279
ISU54_RS05125 1198743 .. 1198753 -  -6.8  -4.13995   GCTTGATAAATTAAA                 GGCA GAA TGCC                 GTGATTTTGCCAATA  71 128
         dld 1196272 .. 1196301 - -12.3  -3.35996   CATCGCGACTGAGAA       GCGGAATTTGC TAGCAGAG GCAAATTCCGC        TTTAGTGACTAATTG  95 93
ISU54_RS05105 1194536 .. 1194559 -  -3.8  -3.57561   CTGGAAGTGGTCAAA          CTACTGCAAA AATA TGTGCAGTTG           GAAAAGCAGGGCGAT  52 261
        yvcK 1186569 .. 1186581 -  -4.9  -3.22678   AATTGTTGACAAAAT                TAGTT GAA AACTA                TGGCTGGGATGGGCT  50 325
ISU54_RS05045 1182090 .. 1182102 -  -5.5  -2.74523   GCAGGCCGAATATCA                GGCCA CAT TGACC                CGGATGATAACCGCG  48 321
        bioA 1177140 .. 1177150 -  -2.4  -4.59109   CAGACGGCGGAAAAA                 CCGC GAT GCCG                 TTACCTTAAACGGTG  63 52
ISU54_RS05010 1174595 .. 1174610 -  -4.6  -2.79183   CTCACTGGCATTACA              GCCGCC GCAC AGCAGC               AGTATTCGTAATATT  45 291
        modE NONE
        modF 1169082 .. 1169096 -  -2.8  -3.54408   TTTGAGCTAAATCAA               CCAATT TAC ACTTGG               CCACCAGCACTGATA  48 141
ISU54_RS04975 1167943 .. 1167963 -  -3.4  -3.09803   TAATCCCACTGAATA           CAGAAATAC AGGG GTATT-CTG            TGAGCATAGACAAAT  46 239
        galE NONE
        galT NONE
        galK NONE
ISU54_RS04955 NONE
        galM 1163290 .. 1163316 -  -4.3  -4.13014   GTCAGAGGTCTAAAA        GGCGGGCAGAAC GTCA GTACGG-CCGCC         TGACAGATGCAGTTA  61 237
ISU54_RS04945 1162721 .. 1162735 -  -5.8  -3.20326   TAAATACACATTCAA               TGATAA TTA TTATCA               TTATATTGCGTGATC  55 190
        gpmA 1161750 .. 1161773 -  -7.5   -5.4505   GCCGTCAATAAAAAA          CCCCG-ACAT TATTC ATGTACGGGG          TTTTTTTACTGTGTT  95 53
        zitB 1159110 .. 1159120 -  -5.4  -3.58329   TAAATACGGTTCAAA                 TCAG TTC CTGA                 TTCGGTTTCGTTTAC  59 85
ISU54_RS04805 1134773 .. 1134789 -  -9.4  -4.19238   GCTCTAACGTTAAAA              GGCACC TCAAC GGTGCC              TCAAATTGCTAACAA  85 98
        nadK 1133126 .. 1133137 -  -4.4  -3.05844   GTCTGTATTTGAACA                CAGT ATAG ACTG                 GTTTTATATACAGTA  47 59
        recN 1131405 .. 1131423 -  -2.5  -3.46141   ATGACCACCAAAAAG             GAAAAAA GTTAA TCTTTTC             TATGCAGCAAGCAAT  48 25
        bamE 1130815 .. 1130837 -  -4.1   -5.1101   TGAGCAGGCAAAAAA           GTAAGGCAC AATCA GCGCCTTAT           TTTTTGTTGTCACTC  78 156
        smpB 1129436 .. 1129450 -  -6.4  -3.42699   ACTCAGCTAGTATAA               CAGAAC TAT GTCCTG               CGATGCCAGTTACTT  61 39
        ssrA 1128979 .. 1129005 - -12.2  -5.24129   TCTGGGCACAAAAAA         GCCCGCAAACCT AGA AGGGATGCGGGC         TTTCCGTACTTCACC 100 72
ISU54_RS04760 1128265 .. 1128297 - -11.3  -4.18367   TACTACAGACACAAA      TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA      TATGCGCCTATAAGG 100 99
ISU54_RS04755 NONE
ISU54_RS04750 1125562 .. 1125576 -  -4.2  -5.03747   AAACCTCGGAAAAAA               TGGGCT CAC AGCCAA               AAGTCCAAAAAATCA  74 230
ISU54_RS04735 NONE
ISU54_RS04730 NONE
ISU54_RS04725 NONE
ISU54_RS04720 NONE
ISU54_RS04715 1118792 .. 1118803 -  -4.4  -4.88228   ATCCAACACTAAAAA                CACT GCTT AGTG                 TGGTATCTGCAACGG  74 427
ISU54_RS04695 NONE
ISU54_RS04690 NONE
ISU54_RS04680 1113678 .. 1113704 - -15.3  -3.52113   CGCCAAAATTTAGAA         GCCCTGAGTTA AGTAA TAACTCAGGGC         TTTGTCGTTTCTGCT 100 45
        rnhA 1111958 .. 1111982 - -12.2  -2.96444   CCCTTCAATAAGAAC          GGTGGGCACT TTATC AGTACCCACC          TGCCTGCGTTGGGAT  76 223
        gloB NONE
        mltD 1109109 .. 1109124 -    -9  -5.37345   TCCAACCATAAAAAA              GCACCT CGAA AGGTGC               TTTTTGACAGTGATT 100 47
        metN NONE
        metI NONE
ISU54_RS04590 1097153 .. 1097176 - -16.8  -3.97674   CTATTATTCAAATAA          CAAGACGGGC TATA GCCCGTCTTG           TCGATATATTCAATA 100 58
        rcsF NONE
        tsaA NONE
        proS 1094047 .. 1094082 -  -7.7  -4.23999   CCATAGCTAAAATAA   GAAGCCGCACGGTAG TTCAAGTT CT-CCG-GCGGCTTC    ATCAGTAAAATACCC  76 101
ISU54_RS04555 NONE
         rof 1091550 .. 1091585 -   -17   -4.1043   TGTAAATAGGATAAA    TGCAAAACGGGCCGCT CTTC AGCGACCCGTTTTTCA     CAAGGAAGTGGAAAC 100 40
         map 1067611 .. 1067625 - -12.8  -5.26316   GCAGCCCATAAAAAA               GCCGGC GGT GCCGGC               TTGTCATTATTACTC 100 35
        glnD 1064884 .. 1064895 -    -3  -4.81685   ATTAATTACTAAAAA                GATA TTTG TATC                 ACAGTTTATCGTTTG  68 24
        dapD 1063865 .. 1063885 -  -8.3  -5.53288   CGTAAGGCAAAAAAA            TAGCGGG TGGTTAG CCCGCTA            CTCTTAATCTTAGTC 100 35
ISU54_RS04430 1063244 .. 1063258 -  -4.2  -2.97245   GCACTCAGAACCAGA               GGCG ATATCTG CGCC               ATGGGTGGAACAATG  47 149
        queF 1058762 .. 1058779 -  -3.3  -3.04461   CAGTGAGCGGTAATA             TTGCGCA CAGG CGCGCAT              TTATTGCCGTGCCAA  44 26
ISU54_RS04395 1057067 .. 1057085 - -13.2  -4.01078   AAAAGTGACCATAAA             CTCTCCTG AAT CAGGAGAG             CAGATTACCCCCTGG 100 203
ISU54_RS04390 NONE
ISU54_RS04385 1055061 .. 1055082 -  -7.3  -3.05463   ACCTGTTTTATGTAA           GGGCTGAAT CGTC ATTAAGCCC            GAGTAATATTGGGCA  61 205
         xni 1054069 .. 1054084 - -11.8  -3.16154   TAACATCATATTTAA              GGGGCC TGTT GGCCCC               TGAGGTTATTGACAA  86 230
        csdA NONE
        csdE 1048715 .. 1048737 -    -2  -3.18657   CGAAAGACTGAAAAG           TGATTTTAAC GTG GTGAAAAACA           GCAAAGGTAAGCTAG  44 306
ISU54_RS04335 NONE
ISU54_RS04330 1046304 .. 1046317 -  -8.1  -6.02919   CCAGAAACAAAAAAA               CACCC GATA GGGTG                TCTAATGATGATATC 100 56
        argA 1043154 .. 1043175 - -12.3  -2.79581   TAAATCGCCAATAAT           CTCAGGGCA TAAG CGCCCTGAG            TTATCTGTTTCAAAT  89 157
        mutH NONE
ISU54_RS04250 1021041 .. 1021070 - -16.5  -3.02511   GGCACTTTGTCAATA       CCCTGAAGGCCGC ATCA GCGGCCTTCAGAA        TGCTGACAAACCCCG 100 243
ISU54_RS04240 1020343 .. 1020359 - -10.9  -3.59979   GTCTGTCATCTGAAA              GGATCTC AAG GAGATCC              TTCAGACTGCTGACA  84 14
        galR NONE
ISU54_RS04210 NONE
ISU54_RS04195 NONE
ISU54_RS04190 1006265 .. 1006295 -  -9.1  -4.84359   TTACCTGTAGAAAAA       TACTCTCCTCTAC GATTA GCAAAGGAGAGCA       CGATTGCTGCTATTG  91 43
        gspS 1002393 .. 1002420 -  -4.8  -3.21099   TTTTTGCACCACTAA        CCTCTG-CAGTAC TGG GTGCTGTCAGTGG        ATACCTTTTTCTTTG  50 368
ISU54_RS04095  989016 ..  989035 -  -3.6   -4.4767   CGATGGATCACAAAA            TAACACAT CGAA AGGTGTTA             ATTTATTAACCGAAA  65 400
ISU54_RS04090  987816 ..  987827 -  -2.2  -2.76261   TTTTAAGCTGCAAAT                GACA TCAG TGCC                 GCTTTAAGTAAAAAG  41 55
        yapM  985562 ..  985575 -  -5.3  -3.43437   CACAAAATTTTAGAA               GTGTT TAGA AACAC                TCAGACCGATATAGC  57 6
ISU54_RS04080  982302 ..  982327 - -14.7  -3.78934   TTCTGGGCACAATAA         CCTCAGGGCGC CTAA GCGCCCTGAGT          CATGTTTTAATCATG 100 71
        tnpA  979636 ..  979656 - -12.5   -3.6761   CTTTGTCAATAAATA            TCCTCCGGC ATA GCCGGAGGT            TTTTCATATGCGCCT 100 105
ISU54_RS04055  976069 ..  976110 -  -6.9   -2.9415   TAAAGGATGCATACA TTAACTCCACAATTAACATT AAT AATGTC-ACTATGGAGTCAA GGTGTTATTTCTCTT  58 30
        kbaZ NONE
ISU54_RS04045 NONE
ISU54_RS04040 NONE
ISU54_RS04035 NONE
ISU54_RS04030  971347 ..  971359 -  -6.9  -3.68351   GCCGCATCATGCAAA                GCCAC GAT GCGGC                GATGGCGATAACGGT  65 40
ISU54_RS04025 NONE
        nagA  969644 ..  969664 -  -4.5  -2.55015   ATGTCAGTGAAGCGA            TCGGCAGAG GAT CCCGGCCGT            GAGCAGCACGGCACT  47 40
        kduD NONE
ISU54_RS04010  967562 ..  967581 - -12.2  -5.24531   ATCGCCTATAAAAAA            CGCACATC AGGT GATGTGCG             CCAGTGCAACAAAAT 100 98
ISU54_RS04005 NONE
ISU54_RS04000  964493 ..  964539 -  -2.9  -3.07431   AAAAGAGGGGTAAGA GGGGATAAAAGAGGGGGCTAAG AACA CTC-GCTCCACCTTATCTCCCC GTTACACCGCACGAG  44 42
ISU54_RS03995  962917 ..  962931 -  -2.8  -4.12724   AAATCAAATAAAAGA               GATTTG CAT CACATC               GAAAGTAAACGCAGT  57 40
ISU54_RS03990 NONE
ISU54_RS03985  961229 ..  961255 - -13.1  -3.05844   TTGGGGAGTCGAAGA         GACGAACCGCA GACCA TGCGGTTCATC         AACGGTACTGGCTAT  95 151
ISU54_RS03975  958233 ..  958245 -  -4.8  -3.01712   TTTTTTCTGGCAACA                GCAC AGGCA GTGC                CGCTGCTGGGTTAAT  50 137
ISU54_RS03970  955597 ..  955618 - -15.9  -4.96501   CCGTACAAAAATAAA           CGGGCTTCC ATCA GGAAGCCCG            TCAGACTGCTGACAA 100 238
ISU54_RS03960  952694 ..  952719 - -16.3  -4.73108   GGTATAAAACTAAAA         TGCTCACTACC TAAG GGTAGTGAGCA          TAGAAGAATAACCGA 100 204
ISU54_RS03925  943528 ..  943543 -  -4.7  -3.14344   GATGTGGCTGAGGAA              CTGAC ATCATG GTCAG               AAGAGGATTGAAGGG  51 232
ISU54_RS03920 NONE
ISU54_RS03915  940387 ..  940397 -  -6.8  -3.93673   TAAATACTGTACAAA                 TCGG TTC CCGA                 CCCATTTGTATCTCT  69 245
ISU54_RS03910  939133 ..  939160 - -12.7  -3.57792   GGATTTACCCTCAAA        CCCGACAGCAG ATTTTG CCGCTGCCGGG         GGCGATAGCGATCAT 100 46
ISU54_RS03905  937869 ..  937879 -  -2.6  -3.45536   AGAAGCAATCGAGAA                 TATT TCA AATA                 CTGTTCATAATGCCA  48 30
ISU54_RS03900  936441 ..  936454 -  -3.9  -5.21709   GGGGATATCAAAAAA               TGATT TTTA AATCA                AAATGTTGAACTGGG  77 222
ISU54_RS03895 NONE
ISU54_RS03890  934909 ..  934922 -  -4.5  -4.37886   GTATTGGTGATAAAA               CCACGC ATG GCG-GG               CAAGTGCTCAGTGGG  66 330
ISU54_RS03840 NONE
ISU54_RS03835 NONE
ISU54_RS03830  924332 ..  924345 -  -3.1  -5.18866   GGCAAATAAATAAAA               GGAAC CTTT ATTCC                TGTCGTTTTAGGTCA  75 106
ISU54_RS03825  923818 ..  923831 -  -5.2  -5.00616   TTGTGGTGCAAAAAA               CGGC TTATAT GCCG                TGGAAAGAGAAAGGC  79 238
ISU54_RS03810  920862 ..  920896 - -12.4  -3.04248   GAACACCTCTGAATA     CTGACTGAACAGTT ATTAGTA AACTATTCAGTCAG     TTTTTATCTTTGTAT  93 97
ISU54_RS03785  918210 ..  918225 -    -9   -3.5936   TCCAAACTTTTTAAA              GGCATC TCAC GATGCC               TTTTTGTATTTAGAG  75 42
        fldB  909634 ..  909662 -  -9.7   -3.8766   CTAGACTAGACTAAA        CTTAACGGGCA TATCGGG TGCCCGTTAAA        TTGAGCTCTGATGTA  84 61
        ygfZ  903865 ..  903892 - -18.6  -5.23292   TGATATAAAACAAAA        TACAGAGACCGG TTAA CCGGTCTCTGTA         GAGTAGAACTCTTTA 100 41
ISU54_RS03680  896828 ..  896875 -  -3.4  -2.89564   TGGTGAGTGGACACA TCCA-TACAGCCGCGAACTGG CGGTATT CCCGGTGGCGGGTGTACTGGA GAATAAATACTGGCC  42 90
        zapA NONE
        ssrS  885988 ..  886000 -  -3.3   -2.6933   TGCGGCATAAAAACT                GCCTG TAT CAGGA                TATAGTCGATAACCC  42 131
ISU54_RS03630  885225 ..  885236 -    -3  -3.58329   TAAAGACGCCGTAAA                TACA TCCA TGTA                 GGCTCGAGCCGCGCC  51 173
ISU54_RS03625  885063 ..  885073 -  -6.8  -4.63542   GATAATGCGGAAAAA                 GCCT TGC AGGC                 GATGAAGGCCATTCC  79 84
ISU54_RS03610  881638 ..  881670 -  -4.9  -4.64676   CTACTGCCAATAAAA      CAGTTGCTGCTCA GTAAACA TAAACAGCTACTG      CCCAATAAACGAGTC  71 20
ISU54_RS03560  870498 ..  870509 -    -3  -3.58329   TAAAGACGCCGTAAA                TACA TCCA TGTA                 GGCTCGAGCCGCGCC  51 168
ISU54_RS03555  869913 ..  869932 -  -6.4  -3.77196   TCAGTATCGATTAAA            GGGCAAAC TCAG GTTTGTCC             TTTTTTTCGGCGCGA  65 489
        metK  865466 ..  865496 - -13.3  -4.62441   GTGCATACAAATAAA       CCACCCTGCCAGC GTGTT GCTTACAGGGTGG       TTCTTCATCGTTTTA 100 71
ISU54_RS03535 NONE
        endA  863800 ..  863834 -  -2.8  -4.54727   GTCCTGAAACGAAAA     TCATACCGTGCGGT GATGAGT ACCGCGCGAAATAA     ACGCAAAATAAATAA  61 223
        rsmE  863035 ..  863047 -  -4.8  -3.57144   TCTCCTAGTGGGAAA                TGGG GTTAT CCCA                GATCGCCAAACCGCA  55 18
        gshB  862013 ..  862045 -    -7   -2.7242   ATGAGGATAAAGTCA     CGGGG-GCAGCGCTT AGAA AAACACCACACCCCG      TTTTATGTATTAGGC  56 35
ISU54_RS03515 NONE
        ruvX  860802 ..  860816 -  -5.7  -5.59564   ATAAATGTAAAAAAA               CACCT GCAAG AGGTG               TGCAATATTTTAAAC  95 163
        aguB NONE
        aguA  858719 ..  858746 -   -15  -4.20783   AGGTGATGCAATAAA        TTAACCCGGATC GGAT GATCCGGGTCAA         GCAGGCGGCTTATTT 100 50
ISU54_RS03490  856824 ..  856842 -  -8.8   -3.1506   AAATGCCGTGATTAA             TCCGCGTT ATA AACGCGGG             CACCAAAAATGGCGG  69 3
ISU54_RS03485  855704 ..  855718 -  -4.9  -3.56568   CAAGCAGCGTTCAAA               CCGGC TCCCT GCCGA               TTTGTCATTCGTTTC  55 173
ISU54_RS03480  855018 ..  855029 -  -2.2  -2.62184   TTTCGGTGGAGAGGA                CTGC ACTC ACAG                 CATGACCCACATCGC  40 20
ISU54_RS03475 NONE
ISU54_RS03470  854051 ..  854061 -  -2.4  -2.78712   GGGGTAATTTAAGCA                 TCGC GCA GCGC                 ATCCAGCATCAATTT  41 8
        hemW  852758 ..  852785 -  -9.8  -3.14961   ATTAGCAGGAAGAGA        GGCTGAGGGCAG GTTT CTGCCCTCAGAG         ACACCAGTCATACTG  74 161
        mutY  838457 ..  838470 -  -2.3   -3.6215   TGAATGCAGTTCAAA               TTGGC ACAG GCCGA                TTTGCCATTCGCTTG  49 74
ISU54_RS03420  838041 ..  838065 -  -9.3    -4.015   CTATTTAGGAAATAA         CAGCGGGGCC TTAATT GGCCCCG-TG          TGGTTACTTACTCGG  83 29
        mltC  836807 ..  836819 -  -5.5  -3.18912   CTATTTACTTATTAA                CCACT AAT AGCGG                CGATAGTTCTTCTGT  53 16
ISU54_RS03410  835370 ..  835382 -  -3.4  -3.17763   CGTAGATCGCATGAA                CATG GATCG CATG                AACGTGGATAGCATG  46 53
ISU54_RS03405  832832 ..  832849 -    -7  -3.90588   TAGGCTCTAACGAAA             CTGCGA CTCGCT TCGCAG              GTATTCGGGTCAATA  67 449
ISU54_RS03380  826060 ..  826086 -  -7.2  -4.71776   TAAGACGCAAGAAAA         CCGAAGTTTGTC ATC GACATCCTCCGG         TTTCTTCGTCCCGTA  81 147
ISU54_RS03265  798090 ..  798110 -  -2.6  -4.46656   CCCAGAACAGTAAAA            TATCACAT AGGAA ATGTGGTA            AAAAAGTTGGGTGTA  62 87
ISU54_RS03255  795297 ..  795336 - -15.4  -5.93809   TTTTTATAAAAAAAA  TGATAAATTTCATGCTTA ATTA TTAGCATGAAATTTATCA   TAGGGAAGGGACAAT 100 199
ISU54_RS03250  794011 ..  794023 -  -4.7  -3.25823   TCTGTGGGAGAGTAA                CTGGC GCT GCCCG                GCCAGCATCGGTGAC  53 302
ISU54_RS03230 NONE
        iucC NONE
ISU54_RS03220 NONE
ISU54_RS03215  784507 ..  784552 -  -7.9  -4.55697   ATTGCCATAAACAAA TTATAGGGGC-TTGCGCAA TGTCTTAATT TTGCGCAAAGCCCCT-TAA TTATTGATGGGTGAT  82 93
ISU54_RS03205  780893 ..  780903 -  -2.6  -2.74605   CGGGTTGAAAATTGA                 TAAA AGT TTTA                 TTGATAAACTCACCG  39 433
ISU54_RS03190 NONE
ISU54_RS03185  773603 ..  773642 -   -15  -2.60615   ACTGCCCCCAAAGAG  TCACCCATACCCACCGGT CTTA ACCGGCGGGTATGGGCTT   TATGACAAAACAGCA 100 95
        cueP  770834 ..  770844 -  -3.2   -5.5208   GTATAATATAAAAAA                 GGAA AAA TCCC                 ACAAAAATACAAGAA  82 403
        yapH  759194 ..  759224 - -11.3  -5.26316   TTATCCCATAAAAAA       CGGCGCATATT CTGTCCTGC AATATGCGCCG       TTGATCATCATGTCG 100 68
ISU54_RS03145  751518 ..  751543 -  -8.2  -3.08679   TGCGCGCAGCTAACA         CCCCTACAGC GTCAAG GCCGAAGGGG          GTCATTGAGTTGCTG  67 27
        pepT  750161 ..  750194 - -16.1  -3.42861   AAGTCACAACATTAA     TAGGGTACTGGCAAG CTAA CACGCCAGTACCCTA      CATGGAGATAAGGCA 100 66
ISU54_RS03135  747262 ..  747279 -  -8.5  -3.25356   GGATAACGAACTTAA             GGTGAAT ATAT ATTCACC              ATGGCTATCAGCCAA  69 521
ISU54_RS03125 NONE
ISU54_RS03120 NONE
ISU54_RS03115  735705 ..  735724 - -10.8  -3.34398   TTGCTCGTGTAAATA            CTGTGCAA GCCG TTGCACAG             CGTGTTCAAGTTGTT  81 31
ISU54_RS03110 NONE
ISU54_RS03105 NONE
ISU54_RS03100 NONE
ISU54_RS03095 NONE
ISU54_RS03090 NONE
ISU54_RS03085 NONE
ISU54_RS03080  722212 ..  722223 -    -3  -3.39668   GCTTAAACCTGATAA                CTTA ATCA TAAG                 AGACTGCCTTGGCAT  47 15
ISU54_RS03075  720062 ..  720078 -  -8.7  -3.34013   TAGTGTTCCAATGAA              TACCGCC GCG GACGGTA              CACAACTGACCGGTT  69 410
        gntP  715560 ..  715571 -  -4.4  -3.67724   TAAACTAGACAAACA                TGCT GATC AGCA                 GTACCACCGCCAAAC  54 3
        yapV  706188 ..  706201 -  -2.5  -2.88389   TGAAGAGTAAAATAC               TATTT ATAC AAATA                TTATAATTTTTTATC  42 183
        vgrG NONE
ISU54_RS03040 NONE
ISU54_RS03035  698034 ..  698046 -  -3.3  -2.71364   CGACTTGTTCAATGA                TGGGC GTA GACCA                CCATTATTATCTTTA  42 116
ISU54_RS03030  697506 ..  697530 -  -5.1  -4.17556   CACACTTTTAATAAA          TCATTTTTCAC ACT GTGAAATATAA          AAAATCAACGAAAAC  65 99
ISU54_RS03025  696504 ..  696525 - -10.2  -3.05596   TACGCCGTCAGGGAA           TTAGGCCC CTGCAT GGGCCTAA            TTTATGGGGCAATGA  76 147
ISU54_RS03010  691838 ..  691849 -  -4.4  -4.10855   AAAACGGTGCGAAAA                CTGA TGAA TCAG                 CACGGGTTACTCAGC  61 506
ISU54_RS02995 NONE
ISU54_RS02990  687581 ..  687593 -  -6.3  -3.14132   TTGGTGTTGCAGCAA                GGTAA ACA TTACC                CGTTATTCTTCAAGC  57 120
        flgA  676443 ..  676454 -  -2.2  -4.26344   ACACTCTGATTAAAA                CGGA ACAA TCCA                 CCTGAAACTTAACTT  58 133
        flgM NONE
        flgN  675338 ..  675367 - -13.7  -5.67063   GCGACCATAAAAAAA       TCCGTCATAGGGA ATAT TCTCTATGACGGA        TTTTTTATTGGGTGG 100 293
ISU54_RS02875 NONE
        fliN NONE
        fliP NONE
        fliQ NONE
ISU54_RS02855 NONE
        flhB  663852 ..  663871 -  -7.2  -3.35706   AACCAGAGGTGATAA            TGGCAATA TTAC CATTGCCA             AGACGCACAGTAATA  64 94
ISU54_RS02840  660996 ..  661031 -   -12  -4.39426   TACAGGGCCATAAAA    TCGCCACAGTAATC TCATACTC GCTTACTGTGGCGA     TCCCTCTTCTTCCGT 100 51
        fepB  657854 ..  657871 -  -4.1   -4.7254   AGCGGTCAGTAAAAA             GCGAC CAATAAGT GTCGC              TTCAGACTGCTGGCA  68 189
ISU54_RS02805 NONE
ISU54_RS02800 NONE
ISU54_RS02795 NONE
ISU54_RS02790 NONE
ISU54_RS02785 NONE
ISU54_RS02780 NONE
ISU54_RS02775 NONE
ISU54_RS02770 NONE
ISU54_RS02765 NONE
ISU54_RS02760 NONE
ISU54_RS02755 NONE
ISU54_RS02750 NONE
ISU54_RS02745  641928 ..  641966 - -13.2  -3.09908   GCGGCGCAAAATAAT   TTTTTGCAAGCGCGGTTA CTG TTACCGCGCTTGCATCAA   CTTTGGTTTTTGAGG  95 82
        metC  638717 ..  638752 -  -8.4  -2.54896   CTTTTATGTAAGGGA    GCGTTAATGCGCCA AGAATTGA TAGCGCATTAACGG     AGTGGTGGCCTCTAT  63 37
ISU54_RS02725  637862 ..  637878 -  -3.6  -4.03978   AAGGCTTCATAGAAA              CGGCGT ATTAG ATGCCG              TTTTATTCACCTGGA  58 56
        yqhD  635366 ..  635376 -  -6.8  -4.55721   AAATCTTACATAAAA                 CGGT TAT ACCG                 CCGCTTCATAGATAC  76 18
        dkgA  634083 ..  634113 -  -7.7  -4.71061   ATCCAGAGGGAAAAA      CAGGC-AGCATTAA GGGG TTATTGCTGGCCTG       AAATCAGCGGTCAGA  86 29
ISU54_RS02680 NONE
ISU54_RS02675  625626 ..  625652 - -17.3   -4.4715   GGGTAACGTATAAAA         CGGCCCTCCCC AGAGA GAGGAGGGCCG         AACCGCTTAGCTGTT 100 32
        tolC  618248 ..  618282 - -10.6  -5.09895   GAGGGAGGCAAAAAA     TAAACCGGGCGCAGCC AAT GACTGTGCCCGGTGAA     GCCAAACCGCTGACG 100 58
ISU54_RS02635 NONE
ISU54_RS02630  616129 ..  616147 -    -6  -3.59979   TTTGGGTATGGTAAA             GGAAGG TGCATTG CCTTCC             CTTACTATAATTATC  61 36
ISU54_RS02615  612737 ..  612761 -  -7.8  -2.96141   TGGAATACAAAATAT          TTAGGGCACC TGATG GGCGCCCTGA          GGTTATTGACAAAGT  62 305
ISU54_RS02585  604595 ..  604609 -  -4.2  -3.61715   TACTCGCTCGAATAA               CGCCGA CGA TCAGCA               GTTCATCCAGCGGTT  54 20
ISU54_RS02580  603169 ..  603187 -  -8.8  -3.58343   GGCAGGAGTCTGAAA             CCCCTTGT TTT ACAGGGGG             AAACGAACAGGGAGT  75 44
        plsY  600622 ..  600644 -  -2.7   -3.6993   CAGTCATTCAAAATA          CTCA-TGGAC AAGA GTCCACTGCG           TTTTTTCATTCCTTT  50 142
        rpsU  598780 ..  598807 - -13.4  -3.94823   CATAAACGAGAACAA        GCCGCGCATTCC TTTC GGAAAGCACGGC         CTTCGTATGCAACTA 100 99
        dnaG NONE
        rpoD  594954 ..  594978 -  -8.6  -5.90981   TTATAGGAAAAAAAA          TCCCGACACA AATAA TATGCCGGGA          TTTTTATTACTTCAC 100 48
ISU54_RS02540  594694 ..  594718 - -13.7  -4.63048   CCCAGAAATAACAAA          GGAGTTACGCT ATT AACGTAACTCC          TTGTTTTATTTGGTG 100 36
ISU54_RS02510  590401 ..  590419 -  -3.1  -2.76263   TGTATCAGGGAACTA             CAGCC CTATGATGC GGCTG             GTGAGCGATATCTTG  43 46
ISU54_RS02495  587485 ..  587497 -  -6.3  -3.53224   TACTTCGTGCGTAAA                CTCTT GTG AAGAG                GACATGATTGAACCC  61 199
ISU54_RS02490  586912 ..  586923 -  -7.2  -2.86186   ATAAAATGAAGAGTA                GCCG CTTG CGGC                 TGGAACGACTGTTTT  59 211
ISU54_RS02455 NONE
ISU54_RS02450 NONE
        mdtN NONE
ISU54_RS02440 NONE
ISU54_RS02435  576037 ..  576050 -  -5.2  -2.75064   GTGGCGACTCAACGA               CGCC ACATCA GGCG                GATTTTACGCTGTTT  48 125
ISU54_RS02390  562466 ..  562477 -  -5.8  -2.71712   TGGGCCGTCGTAAAT                CGTG GTCT CACG                 TAGCACATAACCCAT  52 463
        yapF  559145 ..  559161 -  -7.2  -3.34895   TGGATCCTCAAGCAA              GCGCCA TACCG CGGCGC              TGAACCTCTATTGTA  62 337
ISU54_RS02330  543980 ..  543992 -  -2.7  -2.58999   TTTTTATAGAGCAAC                GTTAT AAG ACAAC                ATTCACTTCCGGTGG  41 14
ISU54_RS02325 NONE
ISU54_RS02320  542629 ..  542663 -  -8.6    -5.626   GATGCGACAAAAAAA     TAAGGCAAAGCGCC GTGAATG GGGGCTTTGCCTTT     ACATTACAGTACCAA 100 29
ISU54_RS02315 NONE
ISU54_RS02310 NONE
ISU54_RS02305  538170 ..  538192 -    -7  -3.05384   CGCTGTGTCATTCAA           TGACCTGG TGCCTAC CCAGGCCA           TTGAATAAGCCGATG  58 95
ISU54_RS02300 NONE
ISU54_RS02295  534845 ..  534859 -  -4.2  -3.38314   GGCAACTGCGAAACA               CTGGAT TCA AACCAG               AAATTTATGGTGCTG  52 234
ISU54_RS02280 NONE
ISU54_RS02275  528226 ..  528247 -  -3.7  -4.85653   TATATACAAAATAAA           TGTGGGGCTA TGG TAGCCCCG-A           TCGATAGATTGTAGT  70 145
        sstT  526526 ..  526551 -  -9.8  -5.60993   CTGGGCACAAAAAAA         TGCCAGTCAA ACTTAA CTGACTGGCA          TTTTGCGTAGGTAAA 100 50
ISU54_RS02265  525815 ..  525839 -  -9.9  -4.51812   TTTGATAACAATAAA          TATCCTCCGGC ATA GCCGGAGGTTT          TTCATATGCGCCTAT 100 103
ISU54_RS02240  518425 ..  518454 - -15.9  -3.02381   GGATAACAGGAGAGA       TGAAAGCCCGATA AATT TACCGGGCTTTCA        TGTTAGTAGGTCATT 100 78
        exuR  517390 ..  517427 -  -7.9  -2.93901   AGCGGAGTAATTACA   CAGGGAAGAGAAA GAATAATGCCGG TTTCTCCTCCCTG    ATTACCCATCATTAA  62 48
ISU54_RS02230  516455 ..  516465 -    -4  -2.90065   AGTTTATAAACACGA                 TCTT GCG AAGA                 GATCTGATGGCTTTT  46 228
ISU54_RS02225 NONE
        mzrA  515075 ..  515087 -  -2.7  -3.09491   GAGAGATCGACGTAA                CAACA TTG TATTG                TGTCCTTTTACAGCA  44 244
ISU54_RS02215  514694 ..  514705 -  -4.4  -3.10908   AAACTCAGCATTTAA                CACT GATT AGTG                 TTGCTGAGATTGTGC  49 20
ISU54_RS02210 NONE
ISU54_RS02205 NONE
ISU54_RS02200  513527 ..  513540 -  -5.3  -3.58505   TGATGAACAATAAGA               CCTAT ACCT ATAGG                GTAAGGATGTGGGGA  59 46
ISU54_RS02195  512796 ..  512818 -  -8.5  -5.40072   TCCCCCTTAAAAAAA           TACCCTACC GGATG GATAGGGTA           TCGCTGATATTAACT 100 69
ISU54_RS02185 NONE
ISU54_RS02180  510604 ..  510622 -   -16  -4.36914   TTTGTGCCCAGAAAA             CCCCCAGC TAG GCTGGGGG             TTCAGTAAAGCTTTC 100 185
ISU54_RS02155  505751 ..  505761 -  -6.8  -3.69092   AAGATGAAGCTGAAA                 TGCC TTT GGCA                 TTCAAAGCACCGTCT  64 225
ISU54_RS02065  486177 ..  486194 - -11.3  -3.47322   GTTCACTATAACGAA             TCAGGGC ACCC GCCCTGA              TTTTGATTGCTGACA  89 124
ISU54_RS02030  476822 ..  476837 - -11.8  -6.22802   GGGCACAAAAAAAAA              CCGCGC ATTT GCGCGG               GCTTGTTAATCTTGA 100 286
ISU54_RS02025  476105 ..  476137 - -11.3   -4.4009   GCTCAGCGGATAAAA      TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA      TATGCGCCTATAAGG 100 99
        leuA NONE
        leuB NONE
        leuC NONE
        leuD NONE
        sgrR  467495 ..  467505 -  -2.6  -3.81141   TCGCATATAAAAAAC                 TTTA CAA TAAA                 AAATGAGAGTATTTA  52 132
ISU54_RS01990 NONE
        thiP NONE
        thiQ NONE
ISU54_RS01970  459960 ..  459977 -  -4.1  -3.53031   GCTATGGTAAAGGAA             GGCGAGCG CTT CG-TCACC             TCTAAAACAACCCTA  52 47
        rapA  456400 ..  456422 - -13.5  -5.71712   CGTCAGACAAAAAAA           TATCCGGGG GAATG CCCCGGATA           TCAGACTGCTGACAA 100 235
ISU54_RS01870  431159 ..  431181 - -13.6  -3.02263   ATATTTGGGGTAATA           GTGTCCATTA AGA TAATGGACAC           TATTCGTCAGATACG 100 157
        rluA  429117 ..  429136 -  -2.1   -3.5125   TGGCGAAGCAAAAAG            CGCAG GAAATTCAGG CTGCG             TATGATTTGATCAAA  47 359
        lptD  425764 ..  425777 -  -3.7  -3.07816   TTTCCATTTATGTAA               TCCGC TATC GCGGG                TTAAGATTCACTGTA  48 60
        surA NONE
        pdxA NONE
        rsmA NONE
        apaG NONE
        apaH  421306 ..  421335 - -10.9  -2.78706   AATTATAGGTGAAAT       CTAAAGACGCATA AGCT CATGCGTCTTTAA        TTAGCGTCTTTACAA  77 63
ISU54_RS01795  416246 ..  416265 - -13.6  -3.66908   CGTGGCGAAAATCAA            GGGCGATG GCAA CATCGCCC             TTTTTACGTTCGTAG 100 204
        rpsT  402721 ..  402750 - -14.5  -3.08344   GCCAAACGATAGAGA       TAAAAAAACCGGC CTAA GCCGGTCTTTTTA        CAAGCACTCAATGTC 100 47
        satP  395968 ..  396006 -   -20  -4.55798   GAGTGGAAAGTAAAA   GCACCTTGAATATTAAAT TTT ATCTAATATTCAAGGTGC   TGTGTAATATAAGCT 100 58
ISU54_RS01715  393252 ..  393281 - -10.3  -4.63184   AATTCACTTTAAAAA       GCCCATAA-TTATT ATC AATAAATTATGGGC       TTTTATCTTTTTCTC 100 47
        yaaA NONE
        arcA  381215 ..  381234 -  -9.3  -5.98675   TATAAAAACAAAAAA            GCCAGCA TCTGTG TGCTGGC             TCTTTCCGTCTCTAT 100 51
        robA  379475 ..  379510 -  -6.3  -3.64703   GTTGGGTGATTGAAA    GTGCTGGCGATACC GCTCATTTA GATAT-GCCAGCAC    TTGATGAATTACAGC  63 42
        yjjX  378213 ..  378241 -  -3.7  -4.17657   CACCACAGCTGAAAA        GCTGGCTCGAAGC CCA GTTGCTAGCCAAC        AAACGCTAAATGGCT  60 31
ISU54_RS01630  372337 ..  372367 - -15.4  -4.14739   TTATTTACCTCAAAA       GCCCCGGAGCTG GGCTGGA CTGCTCCGGGGC       TTTTTCTCTTCTGAC 100 46
ISU54_RS01625 NONE
ISU54_RS01620 NONE
ISU54_RS01615  369569 ..  369590 - -10.9  -4.05926   GAATAAAGGCAGAAA           CCGGTTTAC AGCC GCAAACCGG            TAAATAAAGGACGTT  90 39
ISU54_RS01605 NONE
ISU54_RS01600  365921 ..  365944 -    -6  -3.06183   TTGATCTTGATGGAA          CCCAGA-CGGA ATA TCCGCTCTGTG          TCAGCTACCATAATC  54 447
ISU54_RS01570  361377 ..  361406 - -13.7   -4.7871   AACCATCAGTAAAAA       CCAGCAGCCAATA ACCT CATTGGCTGCTGA        AGAAATACAATATTA 100 38
        malE NONE
        malF NONE
        malG  352110 ..  352130 -  -9.6  -5.24799   TGATAAACATAAAAA            TGGCGGCC ATTAA GGCCGCCC            TAAAGACACAGTACC 100 103
        lysC  347875 ..  347893 -  -6.7  -3.09516   CGTGTTAGCAGTGAA             TGCCCGA TGATC TCAGGCA             TTTTTCTGAGGTTTA  59 254
ISU54_RS01505  340826 ..  340861 - -16.3   -3.0701   ATAATGTTGATCTAA    CGAGGGGGATAAACC GTGATT GGTTTATCCCCTTCG     ATATTACAGTTTAAT 100 52
ISU54_RS01440 NONE
ISU54_RS01435 NONE
ISU54_RS01430 NONE
ISU54_RS01425  318943 ..  318977 - -11.6  -2.77344   TCACTTTTTAATAAC    CTGCGGATGACTGCT GTTAAA AGCA-TCACCCGCAG     TGAAAATGGCCGCCT  81 52
ISU54_RS01420  318781 ..  318800 - -13.6  -5.63504   AATGGCACAAAAAAA            CCCTGACG TTAC CGTCAGGG             TTCTTAAATTTGGTC 100 36
ISU54_RS01415  317050 ..  317071 -  -3.7  -4.90918   ACAAAATCAATAAAA           GTTAGCCAC GAAA GCAACTAAC            TTTAAATAAAAAATC  70 61
ISU54_RS01410  315166 ..  315186 -  -7.5  -3.35224   ATAGCTTCCCAAAGA            GGTGCACCA TAG TGATGCCCC            TAATCAGGGCAGCAC  64 74
ISU54_RS01405  312913 ..  312942 - -10.7   -3.8535   TAACCTAAATAAATA       GACCGATGAACGT TGAT ACGCACACCGGTC        CGGTATAAGGGTAAA  88 42
        dppB NONE
        dppC NONE
        dppD NONE
ISU54_RS01385  308525 ..  308553 -  -2.4  -4.34402   GCTGCGAGACTAAAA        CTGGCCAGCA ACAGGAACA TGCTGGCTAA        GTGTTTAAACATGAC  58 150
        bcsZ NONE
        hmsP  304932 ..  304942 -  -5.4  -3.15841   ATAATCCTATTAAGA                 GTGA AAT TCAC                 ACAACATAATAAAAT  53 214
ISU54_RS01370  303715 ..  303738 -  -9.5  -3.14344   GACTCGGCCCATCAA          GGGGCCTCG CCTCTT CGAGGCCGC           AGCAAGCAGCCTTCC  72 74
ISU54_RS01365  301743 ..  301753 -  -2.4  -3.04517   ACCCGTGGGGAAAAG                 TGCC AGA GGCT                 AACCGACTCTGGGGA  42 95
ISU54_RS01360  300934 ..  300944 -  -6.8  -3.87062   AATTAAGAACTGAAA                 CGCT TCA AGCG                 ACAGCAATACCATCG  67 300
ISU54_RS01355  299402 ..  299432 - -17.7   -2.9294   GACATTATGCAGAGA       CGCTACCAGTGAC AGCAA GCCACTGGTAGCG       AATTGAAGGGAGAAA 100 68
ISU54_RS01350  297479 ..  297534 - -11.3  -3.38991   AGGCCGCGAATAACA GACGTTAA-TGACCGATCGTTGCAGG ATAAA CCTACAGCCATCGGTCATTTTACGCC TGGCTAACGTGGCCT  86 102
        pdeH  294934 ..  294949 -    -9  -3.98159   CAGGAGAAGATGAAA              GGCGAT CATT ATCGCC               TTAGGGAGCGTTAGC  80 36
ISU54_RS01330  292376 ..  292399 -  -5.2  -4.15044   CTGCTGGCCAACAAA          GCAAGCCTGA TAAC CCAGGATCGC           GCCTCAGCAGAGGAG  66 65
        yapE  286652 ..  286676 - -12.1  -3.80625   CCGTCATAACGCAAA          GCGGCATCCAG TAA CAAGATGCCGC          CCCAAATCATTATCA 100 38
ISU54_RS01310 NONE
ISU54_RS01305 NONE
ISU54_RS01300  284520 ..  284547 -  -9.8   -3.4582   GGACTTTATCAAATA        CCGACGGTCAGA TATC TCTGGCCGTTGG         GACATCCTATTTTCC  78 137
ISU54_RS01285  281608 ..  281620 -  -4.8  -3.34398   TCTGCCTGGCAAACA                CTGC GTCAG GCAG                ATACCAAAGACGTTC  52 188
        prlC  275770 ..  275785 -  -2.6  -2.96683   ATAATAAACAAATAC              TGACGTG TGA CACGT-A              TTAGCCCTTAATACC  43 26
        rsmJ  275008 ..  275021 -  -9.5  -3.21934   TTCGGGTGAGAAAAT               GCCGC TAAC GCGGC                GGCGTCACCGATGAA  72 16
        uspB  270234 ..  270252 -   -16   -4.8048   GGCGCATATGAAAAA             CCTCCGGC TAT GCCGGAGG             ATATTTATTAATTCT 100 59
ISU54_RS01225  266402 ..  266415 -  -2.3  -4.82901   GGTGTTGTATAAAAA               TGCGC TTAC GGGCA                AACTTTATTGTTACT  66 36
ISU54_RS01215 NONE
ISU54_RS01210 NONE
ISU54_RS01205  260007 ..  260034 -  -5.6  -2.60211   ATCTCCTCAAAAAGT        TGCCCCTCTCCTT AAT AGGGAGAGAGG-A        TTAGACCGAGCCGAA  52 54
ISU54_RS01200 NONE
ISU54_RS01195 NONE
ISU54_RS01190  256934 ..  256947 -  -4.5  -3.01712   GCTGGCGGCTGAATA               CCGAC CGCT GTCAG                TTGATGAACCCACAG  47 480
ISU54_RS01180  255815 ..  255831 -  -5.8  -2.57092   AATTCGACTAACTCA              TCACGG GAAAA CCGCGA              GGTGAGTGAGGAGCT  52 39
ISU54_RS01175  254943 ..  254966 -    -6  -4.93877   TTCTAGCAAAGAAAA          GGGTATAGCGC GAT GTGC-ATACCC          TTTTTAGTTAACGTA  82 80
        gntR  253454 ..  253465 -  -4.4  -2.89191   CGATAGCGGCATAGA                GCAA TATA TTGC                 TGGCATGATGGGCAA  47 457
ISU54_RS01160  251728 ..  251741 -  -3.1  -4.08394   AGACTGCTGGCAAAA               TCCGA TGAC TCGAA                CCAGCTCCAGATCAC  58 53
ISU54_RS01155  251152 ..  251162 -    -4  -3.54363   AACAACATCAAAAAG                 TGAA AAA TTCA                 TATGTCACCATCCGT  52 217
ISU54_RS01150  250410 ..  250424 -  -2.8  -5.47399   TCAACGTCAAAAAAA               CCAATT CAA AATGGG               TCTTTGACTGCTGAC  80 180
         asd  248226 ..  248243 -  -9.8  -4.60949   CATACGATAAACAAA             GCCCGC ACTCTG GCGGGC              TTACGGGTCTTCCAC 100 67
ISU54_RS01135  247688 ..  247700 -  -4.9  -3.27617   CAACAAAGTGATTAA                TAACA AAT TGTTA                CGTTAGACGTGGTAA  53 160
ISU54_RS01130 NONE
ISU54_RS01125 NONE
ISU54_RS01120  246417 ..  246436 -   -10  -5.63645   TTAAAATATAAAAAA            CCCTGACC ATAA GATCAGGG             TGCTTTGTTGTTCTT 100 515
ISU54_RS01110  232243 ..  232276 -  -5.4  -4.90296   AAAACCCTATAAAAA     TTAATGCCAGAG TATAACCCAC CTCTGGCATTAC      TATTATTCCTGACAC  75 127
        glgB NONE
        glgX NONE
        glgC  224430 ..  224460 -  -3.9  -4.07133   CATTCTGATAAATAA       GTTCAGTCTGATC AATAA GCTCAGTCTGATC       AATAAATCCAACCTG  58 63
        glgA  222761 ..  222772 -  -2.2  -3.35283   ACAACGAGTCGACAA                TGAC GAGC GCCA                 ACAATAACGAGCGCT  45 110
        glgP  220199 ..  220228 -  -5.8  -4.86939   CAAGAAATTTAAAAA      CCCTCTTCAATCGG ATAA CCG-C-GAAGAGGG       TTTTTTACGGTGGCA  78 70
ISU54_RS01070 NONE
ISU54_RS01065  216988 ..  217000 -  -4.1  -3.34646   AAGGTGACAAATATA                TAGCT TGA AGCCA                AACGGGTTTGTGCCC  51 75
ISU54_RS01060  216224 ..  216242 -   -11  -2.73735   AAACAGGCGGAATGA             GTCCGGCA GAA TACCGGAC             TCAGGTAGAAAAGCA  77 399
ISU54_RS01030 NONE
        malP NONE
        malQ  204553 ..  204566 -  -5.3  -2.73681   CACTCACCCGAATCA               CTTAC TTAT GTAAG                CTCATCGGGCTTTGC  50 280
        bioH  202117 ..  202130 -  -5.3  -3.03771   CCATATTTTTCAATA               GTTTC ATAT GAAAC                ACCTCGTATTGGATA  52 188
ISU54_RS01000  201717 ..  201738 - -14.5  -3.78034   CACGCACACCAATAA           GAGATGCCC ATAT GGGCATCTC            AATATGTTGATTCCG 100 141
        greB NONE
        ompR NONE
        envZ  192641 ..  192655 - -11.4  -3.14564   TTATCCCTCCATCAA               GCCACC GCT GGTGGC               TTGGGCTTCACATCC  84 7
        nudE  185000 ..  185023 -   -14  -5.10497   AACTTATCTAAAAAA          CCAGATGATC TGAT GATCATCTGG           TTTTTTTATAAATTA 100 105
        pilM NONE
ISU54_RS00920 NONE
ISU54_RS00915 NONE
ISU54_RS00910  179822 ..  179833 -    -3  -3.11173   AGACAATCCATTGAA                TTCA TTGT TGAA                 ACAGTGAGAACGTTA  46 15
        hofQ  177975 ..  178003 -  -6.8  -3.51032   ATTCGTTAATGATAA       CCCGCCCCGCCAAT CAA ATTAGCGG--CGGG       ACCTAAACTGAAACC  63 309
        aroK  177388 ..  177399 -  -3.6  -2.52795   AACCTTCTTAACTTA                CGCC CGTA GGCA                 TTAGTAAAATGCTAA  44 43
        aroB  176122 ..  176148 -    -6  -3.79419   TGTCTGCACAAAAGA         TACGATGTTTTA CAA TACAACATCATA         ATACTTATGAATATC  63 149
ISU54_RS00890  175002 ..  175013 -  -3.6  -3.34517   ACTCTGTTTCAAACA                GCAC ATCA GCGC                 ACAAATCAGAATGGT  49 41
         dam  173878 ..  173890 -  -4.7  -3.14344   GATCGGCTTTATCAA                CCTGG ACA CCGGG                CTATACCCCAAATAA  51 265
         rpe NONE
ISU54_RS00875 NONE
        trpS  171373 ..  171394 - -14.5  -3.16742   GTTAATGCTGATTAA           TGAGGGGGA AATT TCCCCCTCA            CATTACTGATGCGTT 100 48
ISU54_RS00845  164176 ..  164187 -  -5.8  -3.44848   TTTCTTCACCAAACA                CCGT AGTC ACGG                 CCACGTGACCCACTG  59 126
ISU54_RS00835  160427 ..  160450 - -14.6  -3.16921   ATTAATTGTTATTAA          CGTGGCAAGC CATC GCCTGCCACG           TTCTGCTAGCGCATT 100 48
        ppiA  156547 ..  156562 -  -4.6  -3.14881   TAATGGGGCCATTAA              GGTCAG ACTG CTGCCC               CCAGAAGACTCGTAC  51 190
ISU54_RS00815  154725 ..  154750 -  -6.9  -3.64103   TATCTATACCCCAAA         TAGTTTGTCAG CAGT CTGACAACCCA          CACAGTTGGTTGAAG  65 141
ISU54_RS00810  153995 ..  154012 -  -2.7  -5.30686   AATATGCATAAAAAA             TCATCCG CAAG CAAATGA              TAAATGATGTCATGG  76 61
ISU54_RS00805  152480 ..  152493 -  -4.5  -3.56644   ATACGTAAAAAGAGA               GAGAC TAGC GCCTC                TGAGGTTATTGACAA  55 230
ISU54_RS00790  148856 ..  148879 -  -8.9  -4.56775   ATTTTGGCCTAAAAA          CCCATAACC AAACCG GGCTATGGG           TGGTTCACCATTTAC  93 37
ISU54_RS00785  148184 ..  148201 -  -2.7  -3.14132   CCGCTGGTTCAGCAA             CTGCT GGAAGGGA AGCAG              ATCGCTTAACTAATA  44 212
ISU54_RS00765  145160 ..  145198 - -12.1  -2.74597   CCGAGAGAGAGAGCA   GCATAAAGGAATAAA AGAATATTG TTTATTCCTTTATGC   GATAACAGATGTACT  83 102
        tauA NONE
        tauB NONE
        tauC NONE
        tauD  141542 ..  141559 -  -8.3  -2.70275   TAACGCCATAGATCA             GGGCCGG AACA CCGGCCT              ATCACCCAGAATCGT  63 5
        kefG NONE
        kefB NONE
ISU54_RS00715  134518 ..  134528 -  -2.4  -2.76162   GATTGTAGCGGAAAT                 CTGC CCC GCTG                 TACTCACCCGCATAA  41 60
        slyD  133833 ..  133865 - -16.5  -2.87931   GTGATCGCGTACAGA      GCAAAAAGCCAGC GATGAAG GCTGGCTTTTTGC      TGACGGGGTCAGATA 100 41
        fkpA  132273 ..  132296 -  -9.6  -6.22802   GCGCACAAAAAAAAA          CCGTCACGAC AATT ATCGTAACGG           TTATGAGAAGAGTAT 100 56
ISU54_RS00695  131355 ..  131369 -  -2.1  -3.26947   TAACGCGGACATTAA              CGTTCG TGCC CGA-CG               AGATCGCCACTTTTG  45 7
        tusD NONE
        tusC  130568 ..  130580 -  -2.7  -2.89881   GACTGACGGTATACA                GCATT ATG AATAC                CCAAACCTCATTAAA  42 36
        tusB NONE
        rpsL NONE
        rpsG NONE
        fusA NONE
         tuf  125696 ..  125711 - -10.4  -5.55769   GGGCACAATAAAAAA              GGGTGC CGAG GCACCC               TTTGGTTTGATCAAT 100 60
ISU54_RS00655  124985 ..  125005 - -12.5  -3.72374   CTTTATCAATAAATA            TCCTCCGGC ATA GCCGGAGGT            TTTTCATATGCGCCT 100 105
         bfd NONE
         bfr  123828 ..  123842 -  -5.6  -3.68024   TCGTTCAACATATAA               CCCCCA TAT CGGGAG               TATTGTTCAGTGACA  61 334
        rpsJ  123421 ..  123435 -  -3.5  -2.72379   TCAATCGCTCAATGA               CCTGA TTAAC CCAGG               CTGATCTGCACGTCT  44 16
        rplC NONE
        rplD NONE
        rplW  121817 ..  121828 -    -3  -3.12668   TAGGTTTACATTTAA                CAAT TGCC ATTG                 TTTACTCCTCCGACT  46 40
        rplB NONE
        rpsS NONE
        rplV NONE
        rpsC NONE
        rplP NONE
        rpmC NONE
        rpsQ  118728 ..  118754 - -10.2  -5.24531   AGTGGGTAGAAAAAA         TAAGCGGCCC ATTTTCA GAGCCGCTTA         TTATGTTCGAGTTGG 100 49
        rplN NONE
        rplX NONE
        rplE NONE
        rpsN NONE
        rpsH  116607 ..  116617 -  -3.2  -2.60075   TCCTCCCGAATTAAG                 CTAC GTA GCAG                 ATAATCTCGCCACCA  42 10
        rplF NONE
        rplR  115697 ..  115707 -  -3.2  -3.32963   ACCTCTACCTTAGAA                 CTGA AGG CCAG                 CTTCACGGGCAGCAT  47 9
        rpsE NONE
        rpmD NONE
        rplO NONE
        secY NONE
        rpmJ  113004 ..  113033 - -12.3  -4.61868   CAGTCACATACAAAA       GATTG-GCTGGCTA ATC TAGCCAGCTCAACC       CAACTTTGCAAGAAA 100 56
        rpsM NONE
        rpsK  112148 ..  112164 -  -7.9  -4.42851   CCAACAAACCTAAAA              GCAGCGT TAT ACGCGGC              GCTTTTTCGGCGGAC  82 15
        rpsD  111500 ..  111518 - -10.4  -3.14132   TCTCTTTGGTACTAA             GCTTTACT TGG AGTAAAGC             TCGACGATCAGGTGT  77 10
        rpoA NONE
        rplQ  110024 ..  110037 -  -9.5  -5.40072   GTGGGCGTAAAAAAA               CCGGG CAAG CCCGG                TTTTTTTACGCGTTT 100 46
        zntR  109170 ..  109181 -  -2.2  -3.64703   CTCTGCCGATTTAAA                CCCT CTGT AGAG                 AAATTCATACCTTAA  49 30
ISU54_RS00495  108825 ..  108842 -  -3.4  -2.73681   GAGCTACCGGAATGA             GTTGCC CTAAAC AGCAAC              ACAAAAGCGGGTATT  43 81
        dprA NONE
ISU54_RS00460  102227 ..  102247 -  -2.5  -3.19463   GCCATTAGCCAGCAA            TCTTAGCAC CTA GTGCAAATA            ACCGTCATTGACTTC  44 14
ISU54_RS00455 NONE
        tsaC NONE
        aroE   99931 ..   99945 -  -7.8  -3.87075   ACTATTGGTCATAAA               GCCATG CTA CACGGC               TGTACCATTGGTAAC  69 332
ISU54_RS00390 NONE
ISU54_RS00385 NONE
ISU54_RS00380 NONE
ISU54_RS00375   82037 ..   82055 -  -4.6  -3.97636   AGTGGAATGCAGAAA             TCAGCATC AGT AATGCTAA             TGATTTTTATTACCA  61 500
ISU54_RS00370 NONE
ISU54_RS00365 NONE
ISU54_RS00360 NONE
ISU54_RS00355   77979 ..   77994 -  -2.4  -3.62046   TGAGCGGCTGAAGAA              CCCGCC TGTT GGCCAG               TCTGTAATGCCTGAT  47 364
ISU54_RS00330   76004 ..   76016 -  -6.2  -2.62184   TGGCTCCTCATACCA                GGCC TGAAT GGCC                GATTCATCAAGCCGG  54 130
ISU54_RS00320   74652 ..   74670 -  -6.7  -4.55287   GCTAGCCAGAGAAAA             GCCCTTA AACGG CAAGGGC             GAAGTGGTGAGAGCC  76 86
        xylA   64502 ..   64512 -  -3.2  -3.30124   CGGTAGGGTGTATAA                 GCTC AGT AAGC                 GGTCAACCCAGTAAA  47 60
        xylB   62896 ..   62926 -  -9.1  -4.82901   GTGGCCCTATAAAAA       TGTGCTGAGTAAT AATGA ATTACCCAGCACG       GTGTTTATTCGCACT 100 68
ISU54_RS00240   53836 ..   53847 -  -5.8  -3.38281   GTATGTAAAAGGGAA                CTGC TTGG GCAG                 GGCCTACAGTCGGAA  57 449
ISU54_RS00235   52524 ..   52561 - -13.5  -3.08032   GCGTGGGTAAAACTA   TCCTGCTGGAGAAGC TACCTGAC GCTCCTCCAGCAGGG    AATAAACTTACTCGG 100 33
ISU54_RS00225 NONE
ISU54_RS00220   51255 ..   51270 -    -9  -3.62224   ATATCTTTCCAATAA              GGAGGA ATGA TCCTCC               TTGCTGTCTATTTTC  75 33
        fdhD   39789 ..   39802 -  -6.7  -3.10622   TACGCTTAAAATAAC               CCACT TGTC AGTGG                CCGTATCTTCACGGT  59 222
        sodA   38826 ..   38850 - -15.1  -5.29445   CTTTAACAATAAAAA          TGCCAGCAAGA GGG CCTTGCTGGCA          TGTATCTTTCGTACT 100 115
ISU54_RS00165   36568 ..   36585 -  -2.7  -4.10453   GAAATTCCCTGAAAA             CGAGAAA CCTA TTTATCG              CCAATTATTTCTGAG  57 87
ISU54_RS00160   35910 ..   35922 -  -6.9  -2.94519   AAGAAAAGAAAAATT                CAGGG CAT CCCCG                TTTGTTACCGGAGTA  58 228
ISU54_RS00155   34718 ..   34741 -  -7.4  -4.66456   AAAGAAAAAGAGAAA          CTGGCCGCTGA AAT TCAGC-GCCTG          AAAGAAGTACGGGTA  82 401
ISU54_RS00110 NONE
ISU54_RS00105   23879 ..   23892 -  -3.9  -2.96157   CGGATAAAAAATTGA               TTAAC CCAC GTTAA                CTACATTGGCTAATA  46 297
ISU54_RS00100   23076 ..   23086 -  -3.2  -3.80625   TGCGGATAAGCCAAA                 GGAC ATT ATCC                 GCATGTTTTATCACG  53 86
        ghrB   20819 ..   20852 -  -9.7  -3.35597   TTGACCTGCCAAACA     TCTATTGACCCGC TAAACAGG GCAGGCCAATAGA      ATTGACGGGCGGATG  76 46
ISU54_RS00085   18236 ..   18248 -  -4.9  -3.03624   TGATTAAGTAAATGA                TCATT AAA AATGA                TATAAATAAGACATT  50 298
ISU54_RS00080   17363 ..   17373 -  -5.4  -5.59502   TAAAAAAGTAAAAAA                 CCAT GAA ATGG                 CAAGAGGAGAGAATT  91 315
ISU54_RS00075   15856 ..   15884 -  -5.9  -2.83403   CGCGGGCTATTAAAC        TTCAGGGCAGC GTAATTG GCTGCCCTGTT        TGTATTGGTGAAGGG  53 84
ISU54_RS00055 NONE
ISU54_RS00045 NONE
ISU54_RS00040    8961 ..    9007 - -15.4  -3.05384   GGGTGTTTCATTGAA CCGAACCTCCAGATCATGGAT AAAAAG ATCCAAGATCTGG-GGTTCAG TGCACTTATGGCCCC 100 181
ISU54_RS00035    7301 ..    7315 -  -7.8  -2.76263   GTGATCACCTAATCA               CAGTCG TCT CGACCG               AGCAGGAGGGCTAGC  61 312
ISU54_RS00015    2448 ..    2466 -  -4.4  -3.12142   TGCAGATTGAAGACA             GCGCCAGC CAA GCTGCAGC             CTATGTCGTCATGCC   0 57
