        recF NONE
        gyrB    6223 ..    6250 +  -4.1  -5.81412   TGGCCAGATAAAAAA        GTCCAG-GGTGG GAAAA CTGCCACTGGGC        TTTTTTTTGCCTGAA  93 62
        yidA    7621 ..    7639 +   -11  -2.73735   TGCTTTTCTACCTGA             GTCCGGTA TTC TGCCGGAC             TCATTCCGCCTGTTT  77 435
        ibpA   13278 ..   13290 +  -5.5  -3.87869   TAATCGGGGGCTGAC                CGGTC ACG GACTG                TTTATACAACGTTAA  61 233
        ibpB   13981 ..   14012 + -10.2  -4.41548   TCCCTTGTTTGTCTT      TTCACCGGAGAG ATTCCCCG CTCTCCGGTGCA       TTTTGTGGCGTATCC 100 191
ISU55_RS00065   15874 ..   15898 + -12.9  -4.23674   CGGGCTATTAAACTT          CAGGGCAGC GTAATTG GCTGCCCTG          TTTGTATTGGTGAAG 100 53
ISU55_RS00090   23077 ..   23105 +  -7.6  -3.80133   GAAAATGGGGAGCAG       TGCGGATAA-G-CC AAA GGACATTATCCGCA       TGTTTTATCACGGTG  72 70
        glyQ NONE
        glyS   28670 ..   28681 +    -3  -3.58329   GGCGCGGTTCGAGCC                TACA TGGA TGTA                 TTTACGGCGTCTTTA  51 170
ISU55_RS00120 NONE
ISU55_RS00125   29918 ..   29937 + -11.4  -4.44914   CTTTGTCAATAACCT            CAGGGGCC TTTT GGTCCCTG             TTATTTTCTTACATA 100 226
ISU55_RS00130   32391 ..   32413 +  -3.4  -4.07885   AAGTCATAACTGCTA           GGGCTGTT GGAAGAA AATGGCCC           TTTTACAGCAAGGTA  58 118
ISU55_RS00135   33625 ..   33660 + -12.6  -2.72511   AAGCCAGCTATGTCC    CATTGGCCTGATAACG GAAA CGATAGCGGGCCAATG     ATTTAAGACACTAAA  88 52
ISU55_RS00140 NONE
ISU55_RS00145   34985 ..   35008 + -11.7  -3.33839   GCTTTGCGGTAACCT          CTGGGTGGC ATGGCC GCCACCCGG           TGTGTTGTTCCTTTT  86 46
        fdnG NONE
        fdxH NONE
        fdoI NONE
        fdhE   46804 ..   46819 +  -2.4  -3.08298   TCAACGCACAGGCAA              CTCGAC GTAT GGCGGG               TATATCGTTTAATTA  43 162
ISU55_RS00195 NONE
        selB   50164 ..   50181 +  -3.4  -3.61517   ATTGCGAGATAGCGG             CCTGTT TTCTGC GACAGG              TTCTTGAGGAGAGCT  51 1
ISU55_RS00210   51265 ..   51292 +  -9.2  -3.62235   ATATAGATATCTTTC        CAATAAGGAGGA ATGA TCCTCCTTGCTG         TCTATTTTCTTTCAT  78 10
ISU55_RS00225   52492 ..   52510 +  -2.4  -3.03771   GGGGGAAATACGTAT             CGGTGT GTTTTTA ATACCG             TCTTGAGAAATATAG  42 81
        tssG NONE
        tagH NONE
        tssJ NONE
        tssK NONE
ISU55_RS00265 NONE
        tssH NONE
ISU55_RS00275 NONE
        tagO   65659 ..   65669 +  -6.8  -2.93723   CAGCGTTGAAACCGC                 TGCG TAA CGCA                 TGTCATTGGTGAGGC  58 3
        tssA NONE
        tssM   70624 ..   70634 +  -5.4  -3.01712   GTAAATTCAGTCTGC                 CAGA CAC TCTG                 TATTGAGACACACGA  52 9
ISU55_RS00295 NONE
ISU55_RS00300 NONE
ISU55_RS00305 NONE
ISU55_RS00310   74941 ..   74957 +  -5.8  -2.60496   CAGCTTTGCGCCGTG             GGCCAGG GAGG CC-GGCC              ATGTTTGAAGCGGCC  52 1
ISU55_RS00315   77810 ..   77832 +    -4  -2.64099   TTATGACGCGATGGG           GCGGCGGTTG TAG CAATCGGCGG           GTTCTGATGCGCCGA  45 13
ISU55_RS00320 NONE
ISU55_RS00325   79725 ..   79747 +  -9.2  -3.19175   CATGTAAGCGTATGG           GGAGGATC ATTGTTG GATCCTCC           TTGAATATATTACAA  72 43
ISU55_RS00350 NONE
ISU55_RS00355   83750 ..   83762 +  -3.4  -3.95073   CGGATAGAGCCACGG                CATC AGGAG GATG                TTTATGACTGTCGCA  56 54
ISU55_RS00360 NONE
ISU55_RS00365   89112 ..   89146 + -14.4  -5.14563   AACTGCCATAAATAA     AAACCGGGAAGATCCT AAG AAGATCTTCCCGGTTG     TTTTTTGATCGCCAG 100 30
ISU55_RS00385   92667 ..   92696 +  -8.7  -3.17146   ATGAGAGATGAGCAG       CATACGGCCTCC CGTTGTA GGAG-CCGTATG       TGTGTTATCAACAGA  69 76
        ssuE NONE
ISU55_RS00410 NONE
        ssuD NONE
        ssuC NONE
        ssuB  100516 ..  100542 + -10.1  -3.74872   CATCCATGTAGGCTC        GAG-CCGCGCCA TCCT TGGCGCGGACGC         TTTACTCCCCTGCCT  84 479
ISU55_RS00440  102845 ..  102882 +  -6.1  -3.45514   TAATAACAATTGGTT   GCAGGCATCGGGGGGGG ATTA TCCTCCCCGATGTGAAC    TTAATGTTATATATC  61 177
ISU55_RS00445  104704 ..  104722 + -12.4  -3.61268   TTAATATCTTACGGA             CGGGGCTA ATT TGGCCCCG             TTTACCGATTACATG 100 37
ISU55_RS00460  109063 ..  109088 +  -8.3  -3.34962   AGTTACCCGTAAACA         GGCAGTGGG AAAATAAC CCCACTGTC          TTCTCCACTATCACC  69 136
ISU55_RS00465 NONE
ISU55_RS00470 NONE
ISU55_RS00475 NONE
ISU55_RS00480 NONE
ISU55_RS00485  114881 ..  114906 +  -7.5  -5.72616   CGCGTGAAAGAGAAA         CACCGCAACGGT ATG GCCGC-GCGGTG         TTTTTTTATGTCAGT 100 59
ISU55_RS00495  117512 ..  117557 +  -6.8  -5.12707   ATCTTTCCTGACAAG CCCGGGTATGAACTGTCC AACTTTATGG GGCCAGTCCATGCGCGGG TTTTTTACGCTTTAA  88 49
ISU55_RS00505  119711 ..  119735 +  -9.9  -4.47456   ATAGGCGCATATGAA          AAACCTCCGGC TAT GCCGGAGGATA          TTTATTATTCGGTAT 100 103
ISU55_RS00525 NONE
ISU55_RS00530  123857 ..  123867 +  -5.4  -3.33671   TCAGACGTTATGTAT                 CAGA CAC TCTG                 TTGTGGCGTGAGTGT  55 139
ISU55_RS00535 NONE
ISU55_RS00540  125815 ..  125842 +    -7  -3.30007   CTAAAGAGGTCGATT        TTACCTCGTCAG CGGG CTAACGGGGTGA         TTATCACCGGGTCTT  61 6
ISU55_RS00545  126609 ..  126632 +  -2.4  -2.91383   AGACATAGGCAATCC          TTTTGCCGAT ACCT AACGGGAAAA           TCTATCCATAGCGGT  42 48
ISU55_RS00550  127169 ..  127179 +  -3.2   -4.0098   ACTGTAAAATACAGA                 GAGT CTG GCTC                 TTATTTAACTTAACG  56 66
ISU55_RS00590  133602 ..  133632 + -11.2  -4.75776   TAATTAGCCATCAAG       GCCTGAATTCCGCA CTC TACAGAATTCAGGC       TTTTTAACTTCAGTT 100 115
        csrD  141906 ..  141922 +  -2.9  -4.57569   TGACTGGAACGTGAT              GTGACTG ACG CAGCTAC              TTTTTCACCGAGTCA  61 238
        mreB  143155 ..  143168 +  -3.1  -2.71144   GCGAATCCCGATGCG               CTGAT CCAG GTCAG                TGATTCGGGCGAATG  42 107
        mreC NONE
        mreD NONE
         maf NONE
         rng  146869 ..  146885 +  -2.9  -2.64616   AAGACGGTTCCGCTG              TGGCCCT TGC AGCGTCA              TGGTCTCACTGCGGA  41 71
        yhdP NONE
ISU55_RS00660 NONE
        tldD  153322 ..  153350 + -19.1  -3.67976   TATTACGGGTATAGA        CACCTTCCCTATT CAA AATAGGGAAGGTG        TTTAAAATTAATAAA 100 184
ISU55_RS00730 NONE
        aaeA NONE
        aaeB  178952 ..  178966 +  -5.6  -4.65458   TCGAGCCCTCATAAA               GGCGCT CAC GGCGTC               TTTGTTATTTCTCTC  75 168
ISU55_RS00750 NONE
ISU55_RS00755  181568 ..  181615 + -10.5  -5.75342   GATTACGCCCGCCAA CAGTATTGAGTCGGGAGCCGGG AGTGA CCCGGC-CCCGCCCGATTACTG TTTTTTTTCAGCCAG 100 95
        pmbA  183710 ..  183734 + -15.8  -4.08164   CTTACTGTTCCACAA          CTCGCGGGTA GAAAA TACCCGCGAG          TTTGTATGCGCTTTT 100 56
ISU55_RS00770 NONE
        cybC  185291 ..  185323 + -15.7  -3.83921   TATAAAAGTGAGCGA      TAGAGGGTAATGGCC TGC GGCGGTTACCCTCTA      TTATCTTCTATTACC 100 150
        mlaF  203651 ..  203663 +  -6.3  -3.02043   AAGCGAACGACAAAT                TGGTT ATA AACCA                TGTTGAACGGCGCTT  56 62
        mlaE NONE
        mlaD NONE
        mlaC NONE
        mlaB  206189 ..  206217 +  -6.1  -5.04868   AGGTAAGATAATCAA       GCTCCTGTGCAT AATGGC AT-CACAGGGGC        TTTTCTTTAGTTTCA  84 64
        ibaG  206544 ..  206554 +  -3.2  -3.08798   ATCGCAAACTAAATG                 GCTT TTA AGGC                 TGTTGGCTAAACGCT  46 18
        murA  208011 ..  208035 +  -8.6  -5.59879   TTCGGTAAATAAAAA          TGCCAGCC GGTGATTGG GGCTGGCA          TTTTTTATGTTTATA 100 85
ISU55_RS00915  209982 ..  210006 +  -9.9  -4.55697   ATAGGCGCATATGAA          AAACCTCCGGC TAT GCCGGAGGATA          TTTATTTCTGCAAAT 100 103
ISU55_RS00930  213475 ..  213494 + -11.4  -2.76249   AATGCTATTCTATGG            CGGGCGAC ATTT GTCGTCCG             TACTTAACATGTTTA  81 80
        rplM NONE
        rpsI  214606 ..  214622 + -13.7  -5.64274   GATTGATGGTAAAAA              CCCGGTG TCT CACCGGG              TTTTTTTATGCCTGA 100 62
        sspA NONE
        sspB  216144 ..  216161 + -14.1  -3.69613   GGCTCTATCTCTTCA             GGGCGGC GTTA GCCGCCC              TTATCGTTTCTGTTT 100 64
ISU55_RS00975  224985 ..  224995 +    -4  -4.12198   AAATTATCTCCCCGC                 GATT TGC AATC                 TTTTCCACACTTCTG  61 195
        arcB  227471 ..  227506 +  -6.8  -3.35349   CAGGGAAAACGTTAA    CCTGCGTATTATTTCG ATTT CGAGTGAATTCGCAGG     TTGTCAGGATTCTTT  61 81
        elbB NONE
        mtgA  229166 ..  229211 +  -6.8  -4.11363   GGTATCGATGTGGTG GATAAAAAACGGGCTTGGCG GTTTAG CGCTAAGCCCGTGATAAATC TTATTTAATCTTCTT  71 159
        rsmI  234069 ..  234081 +  -3.3  -3.05816   AGTAATGTGCCTATA                ATCCG CCG CGGAG                TTGACTAGACAGTCG  44 36
        rnpB  234469 ..  234482 +  -9.5  -4.98531   CTCATTCCACAAAAT               CCCGC TTCG GCGGG                TTTTTGCTTTGGAGG 100 38
ISU55_RS01030  236914 ..  236939 +  -8.9   -3.6284   AACGTTCGCTTGCTA         CGCCCTTGGCC TTGG GGAAAAGGGCG          TTTAGCGTGCTAATT  75 85
ISU55_RS01050  242051 ..  242061 +  -3.2  -2.86202   GAAACGGTTGAATTT                 CGGT TTG ATCG                 GTATTTTCGTGTCCC  43 141
ISU55_RS01055  242199 ..  242236 +  -7.9  -3.45839   TTATGAACTGAAAAA   TAACGTAAAGATGACTT TACC AAGTCGTGTTTACGATA    TTGCTCTTTAACAAT  68 77
ISU55_RS01060  245311 ..  245321 +  -6.8  -4.27316   GGCTTAACCTTACAA                 CACC GAA GGTG                 TTTTGAATTGAGAGA  74 30
         rrf  245592 ..  245612 +  -6.7  -2.59683   GCCAAAAGCGGTTTT            GCACAGCGC AGA GCGCTGGCC            CTTATAGGGTAAAGT  56 86
ISU55_RS01070  245729 ..  245748 +  -2.8  -2.79684   GAGCCCCGTCCGTTC            CGCCACC CTAATTA GG-GGCG            TAGTTCAATTGGTAG  42 21
ISU55_RS01075  245827 ..  245846 + -11.4  -5.80951   CTGCCAGATAAAAAA            CCCTTCGC GAAA GCGAGGGG             TTTTTTATTTTAAGT 100 35
ISU55_RS01080  247759 ..  247777 + -13.1  -3.18044   GTTATTGATTCAGAT             GGCGGGG CTTGC CCCCGCC             TGCTTTTATCACCTG  95 33
ISU55_RS01085 NONE
ISU55_RS01090 NONE
        yjfF  251520 ..  251548 +  -9.5  -3.05384   AGGCAGAAAAGCGCA        ACCGCCAGTCGTT TCA AGCAACTGGCGGG        TTAAATGGGCAGAGG  68 195
ISU55_RS01105  252912 ..  252927 + -11.8  -4.20516   GTTAGTTGAGTATTA              GGGGGC TTTG GCCCCC               TTTGTTACATCAGGC 100 262
        ilvL  254963 ..  254986 + -13.8   -5.4505   TTAATCTCAAGAGAA          CCCCCGCACC GAAA GGTCCGGGGG           TTTTTTATTGGCACG 100 51
ISU55_RS01120 NONE
        ilvM NONE
ISU55_RS01130  258172 ..  258184 +  -6.3  -3.24232   CGACACACAATTTAT                TTGTG ACA CACAA                TCTATTTGCGACAGA  59 270
        ilvD NONE
        ilvA  262063 ..  262087 +  -9.4  -4.25056   TAGCCACCAGTTTAT          TTTCCCTTTC TCAGT GAAAGGGAAG          TTTCTTACTAAAATA  79 450
ISU55_RS01170  265160 ..  265174 + -11.4  -5.08824   AAATGCATCAATCAA               CGGCTC TTG GAGCCG               TTTTTTCGGTACACA 100 110
        ilvC  267807 ..  267829 +  -9.8  -5.36441   GTGATTTTATATTGA           GCCTCCCTGT AAA AAAGGGGGGC           TTTTTTATGTGCACC 100 57
ISU55_RS01185 NONE
ISU55_RS01190 NONE
ISU55_RS01195  270079 ..  270107 +  -3.2  -5.47964   ATATGCTTCAGTTAA       CGTCCAGTCAATG AGTG TATTG-TTGGGCG        TTTTTCTTATTTTAT  82 47
ISU55_RS01200 NONE
ISU55_RS01205  270840 ..  270853 +  -5.9  -4.81163   AATATATAATCCAAA               CCGCC TTCT GGTGG                TTTTGTTAATATTTA  78 45
         rep NONE
        trxA  287004 ..  287015 +    -3   -3.6471   TCGCAAAAATCTTGC                GTAA GTCA TTAC                 TTATGTAGTTTGCCC  51 377
         rho  288543 ..  288561 + -11.7  -5.46698   TTGAATCAGTCAAAA             CGCCACG CCAGT CGTGGCG             TTTTTTACTTTTGGA 100 177
        wecA NONE
        wzzE  291397 ..  291409 +  -3.4  -3.32832   TGACCTAAAGAGATT                CACT GTGAA AGTG                TTGACTGTTTTTGGC  47 302
        wecB NONE
        wecC NONE
        rffG  294968 ..  295009 +  -8.7  -2.57795   CCTGCACCTTGAAAT CTATAGTGTCTATCGTTGG GCGA CCTACGAGAGACACCAAAG  TCGATTAATCATCGG  66 139
        rfbA NONE
        rffC NONE
        rffA NONE
        wzxE NONE
ISU55_RS01325 NONE
        wzyE  301610 ..  301626 +  -5.1  -2.90392   TCAACTGTAAGGATT              GTAATGG AAC CCAATAC              TGTCATTCCAAAATA  52 31
        rffM  302385 ..  302412 +  -8.4  -2.55392   ACGCCCCTTCTTATC        TTGACGCCGC AGCGGTTA GCGGCGTCAC         TCAGTTGAATCACTT  63 57
ISU55_RS01340 NONE
ISU55_RS01345 NONE
ISU55_RS01350 NONE
ISU55_RS01355 NONE
ISU55_RS01360  304921 ..  304935 + -12.8  -5.78622   CAATTTCAGAAGAAA               CCCCGC AAT GCGGGG               TTTTTTTTCGCCTGA 100 39
ISU55_RS01365  306305 ..  306337 + -11.3  -4.19704   CCTTATAGGCGCATA      TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA      TTTTGGGTGCGCTTC 100 99
ISU55_RS01395  313653 ..  313679 + -10.1  -3.82218   CATCCATGTAGGCTC        GAG-CCGCGCCA TCCT TGGCGCGGACGC         TTTACTCCTCTGCCT  84 143
ISU55_RS01405 NONE
        dapF NONE
ISU55_RS01415  316208 ..  316221 +  -3.1   -3.1364   GCACGTTGGATCGAG               C-CGGT ATG ACCGAG               TTCAGTGCTTCACTG  46 17
        xerC NONE
        yigB NONE
        uvrD  320117 ..  320143 +  -9.4  -3.40971   TAATCTGATATTTGT         GGTGGTTGCAGT GTC AGTGCGGCCACC         TATCTATTTTTATTT  76 38
ISU55_RS01440 NONE
ISU55_RS01445  323489 ..  323510 +  -7.3  -5.85178   GCAGGGTACGCAAAA           CCGAAGTTG TTAC TGACTTCGG            TTTTTTTTGGGTCTT 100 109
        corA  325043 ..  325087 +  -8.8  -5.42862   GCAACGAATAAAAAA GCCCGGTCACTC-A-ATTGG ACTAACC CCAATATTGAGTAACCGGGC TTTTTTTCGGCATCT 100 64
        pldA  327673 ..  327705 + -14.2  -2.86164   GGCGTTATCACAGTT     TCAGACACAGGCCGG TTAG CCGGCCTGTG-CAGA      TCTAATAGTTGGGGG  95 49
        recQ NONE
        rhtC  330282 ..  330333 + -10.9  -3.66216   AACTGATATTGTCCC G-CTAACGGGTTAGCCAACGGGGT ATTTA ACCCGGTTGGCTAGCCTGACAGGC TCTTTATACTTTGCG  84 21
        pldB  332192 ..  332203 +    -3  -2.97825   CACCAGAGGTTAGAA                CATA CCAT TATG                 TATCATGTTGTTGCT  44 51
        yigL  333048 ..  333066 + -12.4  -3.28041   TGATGCTGTGGAGTA             GGGTGGCC TTT GGTCACCC             TTCCTCCTTGGCGTT  95 63
ISU55_RS01495  334747 ..  334763 +  -6.6  -2.67059   CTGGCATGGGCTTCT              TTGACC AGATC GGTCAA              CTTGATGTCTTTTGC  52 286
        glpA NONE
        glpB NONE
        glpC  340642 ..  340658 +  -6.5  -2.78463   AGTCAATAAAACAGA              GCGCG AGTGAAC CGCGC              TCTGCTGGGACAGAT  55 156
        tusA  342841 ..  342852 +  -7.2  -3.36878   ATAATCTCCGCCAAC                CCGG TCAG CCGG                 TTATGGGTCAATGCG  62 330
ISU55_RS01545  346764 ..  346793 +  -2.2  -4.29396   TTAACAGCTTTTTGG       GTCATTAATGGT TTTTTT GCCATTAATAGC        TTTTAGTGGGTAATT  58 137
ISU55_RS01550  347374 ..  347403 +  -6.3  -3.48105   GCTGCCCTTGCTCAC       CCCAGTCACTGAG TTAT CTAAGCGCCTGGG        TGTTTACTCAGTTGC  61 116
        ftsY  350385 ..  350395 +  -3.2  -2.72511   CCGAGAGGATTAATA                 CGGA TGA TTCG                 CTTTGAACAGGTCAG  42 28
        ftsE NONE
        ftsX NONE
        rpoH  353210 ..  353230 + -11.2  -4.34402   CGGCACGATAAAGAA            GGGCGATA TTGAT TATCGCCC            TTTTGCTGTGCCCAG 100 68
ISU55_RS01585  353913 ..  353945 + -11.3  -5.41143   CCTTATAGGCGCATA      TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA      TTTTTTTGGCAGATA 100 99
ISU55_RS01595  356104 ..  356124 + -10.4  -4.70659   CTTCTATCAACTGCA            TCCCCTCG TATTC CGGGGGGA            TTTTTCCCTCTACAG 100 115
        livH NONE
ISU55_RS01605 NONE
        livG  359206 ..  359218 +  -2.7  -2.97439   CGGGCGAGGCATAAA                CAATA ACA TGTTG                TCATTTAATCAAGTT  43 63
        livF  359945 ..  359955 +  -3.2  -3.40371   TTGACGTTGCAGGGG                 CGTT AGC AGCG                 TTCGTTACTCGGATC  47 56
ISU55_RS01620  360594 ..  360604 +    -4  -3.33798   CCTTTGTATTACTAC                 GTTA TAT TAAC                 TCTATTTATACCCAT  51 16
        ugpB NONE
        ugpA NONE
        ugpE NONE
ISU55_RS01670 NONE
        ugpQ NONE
ISU55_RS01680  373678 ..  373704 +  -6.7  -3.86202   CAGCTAATATGAGAA         TCTAGCATC TGCACTTTC GATGCTAGA         TTTCCTCTGATAGCA  67 51
ISU55_RS01685  375083 ..  375095 +  -3.4  -4.58395   CTGGATCAGCAGCAA                TGTG TTATC CACA                TTTTTCGACGATGGG  65 204
        metE  378162 ..  378177 + -11.8  -5.52096   GTAGTGGGGCTTTTG              GGGCGC TTTC GCGCCC               TTTTTTATTGCGTTT 100 60
         udp  380277 ..  380296 + -11.4  -4.36862   TAGAGGGTTTGTTCT            CGGGTCAG TTTA CTGGCCCG             TTCTTTATTTCATCT 100 59
ISU55_RS01710  381398 ..  381409 +    -3   -4.0492   ATACTAGCCCGTTGT                CTAT ACTA ATAG                 TTTCTCTCCGGCTTA  56 229
ISU55_RS01715  383398 ..  383425 + -13.6   -5.5074   TTGTGCTAATTTGTT        TAAACGGCTGGA ATCT TCTAGCCGTTTA         TTTTTTGTTAAGTTA 100 54
ISU55_RS01720  384214 ..  384230 +  -5.2  -3.78004   TAGCGGGTGTTCAAC              GGTTAA TAGTT TTAACC              TGTTTCTTATCCTCA  61 68
        rmuC  385893 ..  385917 +  -7.7  -3.75015   AGAGTAATTTAATTG          GCACCGCAACC AGG GGGTGTGGGGC          TTTCATCGGAGTTCT  72 34
        ubiE NONE
ISU55_RS01735 NONE
        ubiB  389155 ..  389165 +  -5.4  -2.75498   ACAGAGGCTGTATAA                 CGTA TAA TACG                 ATTCTCTGTGGAATA  50 154
ISU55_RS01745 NONE
        tatB NONE
        tatC  390938 ..  390953 + -11.8  -4.45168   TGCGTTGATATTTAG              CCGCCC TTCT GGGCGG               TTTCTGTTTTGGAAC 100 46
ISU55_RS01765 NONE
ISU55_RS01770 NONE
ISU55_RS01775 NONE
        hemB  394774 ..  394810 + -12.4  -2.73443   TAACTAAGAGTCACA    GCATTCAGATAGGCAC TAACT GCGCCTATCTGAATGA    ATTCTATAATGATGA  88 48
        ubiD NONE
         fre  397917 ..  397936 +  -4.9  -3.14013   TATACCTCAGTTATC            AGGGCCT ACGTTC AGGCCCC             TAATTTCTTGATGTC  51 93
        pepQ  403175 ..  403194 + -11.4  -4.77165   CAACAACATCCAACG            GCCCGGCA TCAT TGCTGGGC             TTTTGTTGTGCCCAG 100 169
ISU55_RS01820  403882 ..  403902 + -12.5  -3.68324   AGGCGCATATGAAAA            ACCTCCGGC TAT GCCGGAGGA            TATTTATTGCCGGTC 100 105
        trkH NONE
        hemG  406773 ..  406802 +  -2.9   -3.5393   GAGTGACCAAAGCAG       TAAACATTTTGAC TTCG GTCAAGATGCCTA        TTTGCAGAAAGTAAT  48 401
ISU55_RS01840  408479 ..  408502 +    -3  -3.81929   TAACGAGCAAATAAA          GCCGGGCTGA GAAA TTGGTCGGGC           TTTAGTACCTTGTTG  53 90
ISU55_RS01845 NONE
ISU55_RS01850  408729 ..  408775 +  -3.9  -3.45839   TCCACCATATAAAAC TATTTCAAAACGTACTGCGGTC GCAA GGCA-CAGTGTGTTGTGAAATA TTGCTCTTTAACAAT  51 34
ISU55_RS01855  411850 ..  411860 +  -6.8  -4.27316   GGCTTAACCTTACAA                 CACC GAA GGTG                 TTTTGAATTGAGAGA  74 30
         rrf  412089 ..  412107 +  -8.1  -5.24989   AAATAAAGCCAAGAC             CCCATGC CCAAA GCGTGGG             TTTTTTGCTGTGTGC 100 44
        murB  413550 ..  413561 +  -4.4  -3.96327   TAATGGTGAAGTTAA                TGCT GTGG AGCA                 TTTATCGTGAAAGAT  59 4
        birA  414529 ..  414564 +  -2.9  -4.64676   TTCGAGGTGTCTGAT   TAAT-TA-ATGGGAGAT AACT ATCTCCCGTATAGATTA    TTTTCTTAAGCGTAC  64 27
ISU55_RS01885 NONE
ISU55_RS01890 NONE
ISU55_RS01895  418679 ..  418689 +  -5.4  -3.14132   TAATCAGTAGGTCCC                 GAGT TCG ACTC                 TTGGTGCCGGCACCA  53 0
ISU55_RS01900  418894 ..  418911 +  -6.3  -2.84126   ACCTCGATGAAGAGT             GAAGTGGC CAA GCC-CTTC             CTTTCAGATTTCTGC  55 112
ISU55_RS01905  419038 ..  419048 +  -3.2  -2.56596   CCCGCTCCAAGATGT                 GCTG ATA TAGC                 TCAGTTGGTAGAGCG  42 32
ISU55_RS01910  419182 ..  419197 +  -4.6  -3.19175   ATATGCTTGGTTGAT              ACGGTG AAAC CACCGA               TTCCGTGTCTTAGAG  51 94
         tuf  420431 ..  420448 + -11.3  -4.91712   CGACATGCGATAAAA             GGGCATC ATTT GATGCCC              TTTTTATACGTTGCA 100 50
        secE NONE
        nusG  421628 ..  421656 + -16.2   -5.2853   TTGAGTCTTGTCTTA        GGCGCGAAATTA AAATA TAATTTCGCGCC        TTTTGTTTTTAGATG 100 66
        rplK NONE
        rplA  422938 ..  422976 + -13.3  -3.13565   TGCTTTTATCGCTTT   ACGTGGGCGTAAGGTTT GTCTA AAATCTTACGCCCATGC   TATCTGTTGATCGTT 100 49
        rplJ NONE
        rplL  424251 ..  424276 + -14.1  -4.64766   ACTTTATAGGCTGAT         GGCTGGTGACT TTTT AGTCATCAGCC          TTTTTGCGCTGTAGG 100 65
        rpoB  428594 ..  428625 +  -7.3  -2.72661   GTAATTCTTCACCAG      ACGGCAAACTCTC ATAGCC GGGAGTTTGCTGG       TGGTTCGCACTGGTC  58 37
        rpoC  432959 ..  432977 +   -16   -4.8048   CTACCAAATAAATAT             CCTCCGGC ATA GCCGGAGG             TTTTTCATATGCGCC 100 53
        nudC NONE
ISU55_RS02005 NONE
        hemE NONE
         nfi NONE
ISU55_RS02020  444879 ..  444912 +  -4.5  -3.57971   TCTTAAGGCTTCACA     TCTGCCCCCTGTCTGT TCT ACATTTGGGGGGC-GA     TTTAAAAGTGGCTAT  57 77
        hupA  445319 ..  445332 +  -5.2  -4.99043   AATAATAAGCAGGGG               GGGG ATAAAA CCCC                TTTTGTTTATGCAGC  78 53
ISU55_RS02030  445977 ..  445991 +  -7.1  -2.53263   TGCCGTTGGGAACCT               CAGGC AGGCA GCCTG               TAAGTTACCGATGAG  58 8
ISU55_RS02045  451343 ..  451366 +    -3  -3.81929   TAACGAGCAAATAAA          GCCGGGCTGA GAAA TTGGTCGGGC           TTTAGTACCTTGTTG  53 90
ISU55_RS02050 NONE
ISU55_RS02055  451593 ..  451639 +  -3.9  -3.45839   TCCACCATATAAAAC TATTTCAAAACGTACTGCGGTC GCAA GGCA-CAGTGTGTTGTGAAATA TTGCTCTTTAACAAT  51 34
ISU55_RS02060  454714 ..  454724 +  -6.8  -4.27316   GGCTTAACCTTACAA                 CACC GAA GGTG                 TTTTGAATTGAGAGA  74 30
         rrf  454952 ..  454972 + -10.4   -4.8048   CAAATAAAGCCAAGA            CCCCATGC CCAAA GCGTGGGG            TTTTTGCTGTGCGCG 100 43
ISU55_RS02070  456521 ..  456540 +  -7.8  -4.31859   CCTGGTACGGATATT            GGGGAGGG ATCA TCCTCTCC             TTATTATTTTGTTCG  79 46
ISU55_RS02085  460052 ..  460065 +  -9.5   -4.1721   TTTGTCAGCAATCTA               GGCCC CTAG GGGCC                TTTTAACCTGTAAAT  85 66
        gltP  466315 ..  466343 + -17.5  -5.38054   AATAGTATCTACCCA        CTCCCCGTCAGCA TCA TACTGACGGGGAG        TTTTTATTTGTCGCC 100 106
ISU55_RS02120 NONE
        sctD NONE
ISU55_RS02130  473163 ..  473174 +  -4.4  -2.79915   GCATAAGATTAATTG                TTCC CTAA GGAA                 TATCATGAAGTCAAT  46 116
        sctF NONE
ISU55_RS02145 NONE
        sctI NONE
        ssaJ NONE
ISU55_RS02160 NONE
        sctL NONE
ISU55_RS02170 NONE
ISU55_RS02175  480169 ..  480179 +  -6.8   -3.4285   TACCACTCTGGAACA                 CCTG GCG CAGG                 TTGTCGGTTGAATCA  63 4
ISU55_RS02180 NONE
ISU55_RS02185 NONE
ISU55_RS02190  481946 ..  481965 +  -4.2  -4.52873   ACCCCTGAAAGGGGC            GGGGGACA AGAC TGTCCATC             TTGTTTTTATGCGAA  66 64
        sctR NONE
ISU55_RS02200 NONE
        sctT NONE
ISU55_RS02210  485117 ..  485137 + -11.3   -2.8577   TGTCAATAACCTCAA            TAGGCTTAT TAT ATAAGCCTA            CTTTCCCTGTTACCT  81 315
        yedE  486406 ..  486417 +    -3  -2.58758   GACAACCTCGGCCCT                GATT AAGG AATC                 CTTATGAGCCATTCT  42 7
        yedF  486891 ..  486915 +    -3   -3.4268   TTTGCTAGGGTAATA          TAAAGCATAT AGGCC ATATTCTTTA          TCTTTAGCATTATAA  47 226
ISU55_RS02230 NONE
        metC  490535 ..  490547 +  -4.7   -5.0538   GTTGGTGCTTTGGAA                CCGCC ATA GGCTG                TTTTTTAGCATAGCG  77 126
ISU55_RS02320 NONE
ISU55_RS02325 NONE
ISU55_RS02330  509293 ..  509309 +  -2.3  -3.29211   AATAATTTGAGGAAT              TATGG AATCCAC CCATA              TTGGCTTTCCCATTG  45 46
ISU55_RS02335 NONE
ISU55_RS02340  511104 ..  511128 + -12.3  -3.61268   ATTAACGTATTCATA          TATTCAGGGCA AAA TGCTCTGAATA          TTTAACACTTCAGTG 100 156
ISU55_RS02345  511754 ..  511772 + -12.4  -5.81412   CCCGTTTCAATTAAA             CCCTGCTG CAT CGGCAGGG             TTTTTTTTCGCTCAA 100 47
ISU55_RS02350  513114 ..  513128 +  -2.9  -4.88687   TATGGCCAAGGCTAT               TTTTG ATTGG CAAAA               TTATTTTTTGTTTAA  67 56
ISU55_RS02355  515709 ..  515719 +    -4  -2.57132   CGATGCGGTCTGTCA                 GTAA GTT TTAC                 ATTATAAAAGCAGCA  45 22
ISU55_RS02360 NONE
ISU55_RS02365  517103 ..  517113 +    -4  -4.21194   CTTGTGAATGCCTTG                 TTCT ATA AGAA                 TTTTACCTGATAAAG  61 336
ISU55_RS02370  519599 ..  519609 +  -2.6  -3.60631   TGACTAATGTGCCCA                 TTTT TAT AAAA                 TTCTCATATTTATTA  50 320
ISU55_RS02375  522740 ..  522753 +  -8.1  -2.85216   CCCGTGCACCTATCG               TGCCG CCGA CGGCA                TAGTTGTCACTGATA  61 395
        ubiC  527954 ..  527967 +  -8.1  -2.73364   ACGGATCCTGATGCG               CTGGC TTAA GCCAG                TGATTCCGGTAGGCG  60 69
        ubiA  529034 ..  529056 + -11.3  -3.89291   GGTAATGGTAAAAAA           TGGCCGGAT AATGA GTCCGGCCA           TTGTTATGGTATTCA  95 117
ISU55_RS02400  532171 ..  532181 +  -2.4  -2.94099   TTTGGTTCCCAACAC                 CCGC TTA GCTG                 TATATACTCACAGCA  42 97
        lexA  532862 ..  532883 + -12.3  -3.32233   CTCCCAGAATAATAA           GCCGTGCCT GTTG AGGTACGGC            TCTATTTCATGATTC  95 55
        dusA  534917 ..  534950 + -15.5  -3.13908   TTCGGCAAATTGGGC     CCCCGAATTATTTAC TGGC GTAAGTGATTCGGGG      TTCACTCATTCACTT 100 135
        pspG  535820 ..  535847 + -14.9  -4.69664   AAGAAAGTGTAATGA        CAGAGGGCTCC TTAATC GGGGCCCTCTG         TTTTTCAATCATGTA 100 304
        dnaB NONE
         alr  539892 ..  539909 +    -4  -3.92522   TGTAAGCCCTAGGAG             GGCCGC TCCGTT GCCGCC              TTTCTGCAATTCGGA  59 134
ISU55_RS02440  541654 ..  541668 +  -3.5  -3.61715   TTTATGCATCTTTTA               GCTGC ATGGC GTAGC               TTATTACAGGAGATA  53 517
ISU55_RS02445  542104 ..  542133 + -10.8  -2.84098   GCTGAATGTCATACC       CTCTGGAGCAAT ACATTG ATTGCCCCAGAG        TGGTTCATTAAACGG  77 81
        ssb1  546079 ..  546098 +   -15  -3.52073   ATTAGCTTTAAACGG            CCGCGCCA CGGA TGGCGCGG             TTCTAGTATTCAGGA 100 114
ISU55_RS02485  551545 ..  551564 +  -2.8  -3.34398   TGACGAAAGTGAAAG            TGAAACAG CTCA CAGTTTCG             TATTTAGGCGGCAGC  46 38
        rhaS  552588 ..  552611 +  -2.3  -3.05963   TAGCCGCTTGAATTG          CCCTGCAAG AAAGGG CGTGAAGGG           TATTACGGTAAAAAT  42 38
        rhaR  553632 ..  553664 +  -5.6   -2.8789   ACGATTAGCCATAAG     ATAACGGGCAG-GTT TTTC AACGCTGCCCGTCAA      TATCATCATCTTTAA  53 77
ISU55_RS02515  559356 ..  559366 +  -6.8  -3.93664   GGTCTTAAATAGAAT                 CAGG CAA CCTG                 TTTAATATGTTGCAT  69 355
        aegA NONE
ISU55_RS02535 NONE
        fdhF  565458 ..  565500 +  -8.3  -4.77173   TGTCGTGATTGAGCG TTGATTATGCCACGGCGAG ACCTA CTCGCCGTGGCGACAGCTA TTTATTTTGTAACCG 100 43
        fxsA  571803 ..  571834 +  -6.8  -2.52676   AATTATCTACCGCCA      GGCGA-GAAAAAAAT GAA ATTTTTTTGGTCGCC      TCCCTTGAAGGAATA  55 136
ISU55_RS02570  572235 ..  572246 +  -5.8  -3.02381   CTGGCAATTGTTGAA                GCGT AATC ACGC                 TCTCTAATCTTCTGA  54 20
        groL  574010 ..  574041 + -16.8  -4.38154   AGGTAAAGCTGTTGA      TAAAAGCGAGTAGG GTGA CCTGCTCGCTTTTA       TTTTGTGAAGACTGT 100 102
ISU55_RS02580  575386 ..  575396 +  -8.2  -3.06265   CATCGACCATAAAGT                 GGGC TGC GCCC                 TGTACTTTATCCAAT  62 456
         efp  576962 ..  576976 +  -4.9  -4.53163   AAGAACGAAAGGAAA               CCGCT TAAAT GGCGG               TTTTCTGCTATCTGG  68 117
        sugE  577658 ..  577681 +    -3  -4.15565   CAAGGCCATAGAATA          CCCATTTCCC TGCC GGGACGTGGA           TTTTCAAATCATGCA  59 252
ISU55_RS02620  581335 ..  581363 +  -5.2  -4.06903   CAGATTTGTCTGGGG        CGCGGGATACAG GTAGA CTGCATCCCCTG        TTTGATTTCGGAGTT  63 134
        epmA  582439 ..  582460 +  -6.5  -5.48514   CAAAAACAAATACCC           TGACCTGTG AAGG CGCAGGGCA            TTTTTATTTCTTACT  91 101
         orn  589131 ..  589169 +  -4.6  -3.05596   TATATACTCTGTCTG   GTGCTGGTAAAAACACCA TAT TGCTGTTTTAATCGACAC   TTAAATAGAAAAATG  50 409
ISU55_RS02650  589382 ..  589401 +    -8  -3.05816   CGTTTCCCGCTCCAA            GTTCTTTA GCAA TAAAGAAC             TTCAGTCAGAAGTAA  62 27
ISU55_RS02655  589774 ..  589793 +  -2.9  -5.69262   ACTTGTGCTTTTTTT            TGCACTTG ATTGC CAAG-GCA            TTTTTATTTTTATGC  84 252
         nnr NONE
        tsaE NONE
        amiB NONE
        mutL NONE
        miaA  597931 ..  597944 +  -4.5  -3.33696   ACGCAGTTTATTTTC               GAGCC GATA GGTTC                TTAGTTAAAAACAAC  53 90
         hfq  598347 ..  598358 +  -7.2  -2.88776   TCAAGCTTATGTTCT                CCGC ACTA GCGG                 CTTTGATCCGTTTGA  59 85
        hflX  599666 ..  599689 +  -3.3  -2.66274   CAGTTATATTCAAAA          TAATTAATC TGGTGC GGTTAATTA           CTTGATTATGCCCAA  42 19
        hflK NONE
        hflC  602294 ..  602312 +  -9.5  -4.43213   TGAACGTAACACCGA             GGCCCGT CTAGT GCGGGCC             TTTTCATGTGTTGAA  95 139
ISU55_RS02710 NONE
ISU55_RS02715  604037 ..  604066 + -15.9  -2.80816   TATTTGTGTTCGAAA       CAATAAACCGGGC TGAT GTCCGGTTTATTG        TCTAATACATCCAGC 100 112
        nsrR  604819 ..  604829 +  -5.4  -3.33922   AGCCAACGAAAAATG                 GGTT TTA AACC                 ATTTTTAACGGCGCT  55 100
         rnr  607553 ..  607577 +   -10  -3.08072   TGGTGGTGTGCTACT         TGCCGGGCGGC TTTT GTCGCCCG-CA          TATAATTTAATTATT  74 59
        rlmB  608625 ..  608646 +    -3  -5.08088   TGTCAATAACCTCAA           ACCAACAT CTTTGT ATGTTGGC            TTTTTGTTGGGAATT  71 272
ISU55_RS02735  610603 ..  610613 +  -5.4  -3.59738   GGCATTGGCCCTGCG                 CTGA ATT TCAG                 TTTCAACGTCTCCTG  56 199
ISU55_RS02745  611450 ..  611465 +  -4.6  -4.37092   CGGGGGGCCATTACT              CCACGC TGAA GCGTCG               TTTTATAACGGCCCT  66 374
        yjfP  613729 ..  613742 +  -3.1  -2.95204   TCTCCGTCTCTGATA               TAGAG GGTG CTCTG                ATTATTTAACCGTGA  44 43
        rpsF NONE
        priB NONE
        rpsR NONE
        rplI  615546 ..  615564 + -11.7  -4.48987   TGTAACCTGTTAAAA             CGCCAGC CTAGT GCTGGCG             TTTTGCTTGTGCCCA 100 51
ISU55_RS02785  616248 ..  616280 + -11.3  -4.50058   CCTTATAGGCGCATA      TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA      TTTTGGTTATCGGTA 100 99
ISU55_RS02800  618612 ..  618644 + -22.9  -4.44046   CCTTGGTACCGATTA      TGCCAAAGGGCGACA GGG TGTCGCCCTTTGGCG      TTTATTTACGATAAG 100 43
        cysQ  622677 ..  622705 + -15.3  -2.84812   ATTGCTGCACAAGTT        GGTGCAGTTGGTC GAT GACCTGCTGCACC        TCTGCTGATGTCAGT 100 45
ISU55_RS02825  623820 ..  623839 + -12.1  -3.82946   GAGCAGATTTAATCA            CGGCCCC AACTCA GGGGCCG             TTATGTTTACCGTGA 100 74
ISU55_RS02840 NONE
ISU55_RS02845 NONE
ISU55_RS02850  632452 ..  632503 +  -7.2  -5.60993   GCAGTAACAAAAAAA CACCGCACAAGGTAAAC-GGCCCTA TTT TGGGGCCTGTTCACGATAGGCGGTG TTTTTTTATAGGCGA 100 67
         mpl  636083 ..  636100 +  -4.1  -3.97019   CGGGCACTTTGTCAA             TAACCTC ATTG GCGGTTA              TTATTTACACTTAAT  59 287
         mdh  638690 ..  638705 + -10.4  -2.59431   CTGCAAGCGTTACTC              GGCCCA TCCA TGGGCC               TCGCTTCTGCGAGGC  74 75
ISU55_RS02890  639931 ..  639949 + -10.3  -3.96224   CATTAATGGGATAAA             CCCGGAT GGTGA ATCCGGG             TTTCTAAATAATTTC  89 76
        rplU NONE
        rpmA  641825 ..  641847 +   -12  -4.84529   TGTAAATAGATGTAA           GCCCTGCAAT TTC GTTGCGGGGC           TTTTTACATTTCTGG 100 54
ISU55_RS02910 NONE
        cgtA  644065 ..  644096 +  -9.5   -5.0133   CAGTTATTCTTTGAA      TAAGGGCTGCCAT TTTTTC GTGGTGGCCCTTA       TTTTTTGGCAGGGTG 100 47
        greA  648119 ..  648132 +  -9.5  -4.36914   TAAAGAAAAGTAAAA               GGCCG CAAG CGGCC                TTTTATCAGAACAAA  88 92
        rlmE NONE
        ftsH  651284 ..  651301 + -11.3  -5.84381   TTGTGACTAATATAA             CCCTAGG CTTG CCTAGGG              TTTTTTTGTTGCTAA 100 69
        folP NONE
        glmM  653649 ..  653663 +  -2.8  -4.00469   GATGAAATTGCCCTT               GCGT GAACTAG ACGC               TTTGGTTAGTATTCA  54 131
        secG  654149 ..  654183 +  -2.9  -3.07816   AAAAAGAGTTTTAAA     AGGGTTGTTGTTACT TGGAC AGTAAAAACAACCAG     TTGAATCAGTGCCGG  44 73
ISU55_RS02970  654308 ..  654318 +  -3.2  -2.84504   AACTTGCTTTTTTAT                 CGTT ATC GACG                 TAGTATTTGCCACGT  43 53
ISU55_RS02975  654416 ..  654430 +  -7.2  -5.79526   TCCGGCCCCCGCAAC               CACTTT CCT AAAGTG               TTTTTTTTCAAATGT 100 24
        rimP NONE
        nusA NONE
        infB  659321 ..  659346 + -13.3  -2.87931   GATTTGCAAATATCC         ATTTGGGGGGC CTTG GCCCCCCAAAC          TGTCTGGAGAATCCA  93 49
        rbfA NONE
        truB  660747 ..  660758 +  -7.2  -2.53876   AGAAAATAAAAAGTA                GGCC ACAC GGCC                 TGCCTTGCGATCCCG  58 25
        rpsO  661174 ..  661220 + -15.4  -3.05384   AGGGGCCAAGTTGCA CTGAACC-CCAGATCTTGGAT CTTTTT ATCCATGATCTGGAGGTTCGG TTCAATGAAACACCC 100 61
ISU55_RS03010  662726 ..  662748 +  -5.7  -2.72096   GCGGCTAATGAGAGA           CTTTAACTT AATGA AAGTTAAGG           ATTGTCATTAGTCGC  52 172
         pnp  664975 ..  665006 + -13.8  -3.48276   GTAATTAAGTCATTC      CACAGCTCCTTGCT CATC GGTAAGGGGCTGTG       TTATCTCAGGGGCGG 100 37
        nlpI  666000 ..  666017 +  -4.1  -3.15544   TATCAGCCTGATATA             CCTTGGT TTTT ACCAAAG              TTAATCACCCTAACA  49 53
        yrbN NONE
ISU55_RS03030  668190 ..  668205 + -10.4  -5.65177   GATTAAACGTAAAAA              CCAGCC TTCG GGCTGG               TTTTTTTATGGCTAT 100 62
ISU55_RS03035 NONE
ISU55_RS03040  669295 ..  669310 + -10.4  -5.61596   GTCAACAACCTCAAA              CCAGCC TTCG GGCTGG               TTTTTTTATGGCGGT 100 228
ISU55_RS03055 NONE
ISU55_RS03060 NONE
ISU55_RS03065  676694 ..  676725 +   -16  -3.39895   GTTAATAAACATGAA      TAACAGGGAGGCCA GCAA TGACCTCCCTGTTA       TTACTTGATAAGGCA 100 112
ISU55_RS03080 NONE
ISU55_RS03085  680180 ..  680196 +    -8  -5.32396   TTGTCAATAACCTCG              GCTGGT CAATC ACCAGC              TTTTCTTTTTGCTGT 100 235
ISU55_RS03105 NONE
ISU55_RS03110 NONE
ISU55_RS03115 NONE
        ugpC NONE
ISU55_RS03125 NONE
ISU55_RS03130 NONE
ISU55_RS03135  691470 ..  691482 +  -6.2  -3.61178   GTTAAATAAGCGATA                GCCC GGTTG GGGC                TTTGCAGTAAATAGC  59 324
ISU55_RS03225  709643 ..  709666 +    -3  -3.80573   GTAAATCATATTGTT          CGGCCATCTG CTTA CCGATGGTGG           TTTGGTCATCGTGGA  52 469
        rraB  711316 ..  711338 +  -8.4  -2.76696   AGTTTTTTGTCATCA           TTAAGGGTGC ATG GCGCCCTGAA           ATTCTTGCAGGGGAG  64 185
        lptF NONE
        lptG NONE
ISU55_RS03270  719689 ..  719704 +  -6.8  -5.47218   TAGTATGAAAATTAA              GTCACC GCAA GGTGGC               TTTTTTTGCCTAAAA  91 42
ISU55_RS03275  721147 ..  721171 +    -8  -5.39755   TAAAAAAAGTTTCTG          TAAGGCATGT ATCTG ATATGCCTTA          TTTTTTCTAATTGTG 100 42
ISU55_RS03280 NONE
ISU55_RS03285  724645 ..  724660 +  -4.6  -4.37092   CGGGGGGCCATTACT              CCACGC TGAA GCGTCG               TTTTATAACGGCCCT  66 374
ISU55_RS03300  726796 ..  726816 + -12.5   -3.6761   AGGCGCATATGAAAA            ACCTCCGGC TAT GCCGGAGGA            TATTTATTAAAACAC 100 105
ISU55_RS03320  730113 ..  730134 +  -5.9  -2.78384   GGGTTGTGTGGTAGA           TAAGGGC CTATTTTC GCCCTTA            TCTACTGGGCCAAGC  53 132
        ampD  735417 ..  735434 +  -7.1  -3.55714   ATGTTGCCGGTGGCA             TTACACT AGCC AGTGTAA              TTGTATGCTCGATGT  66 43
        ampE  736901 ..  736940 + -14.4  -3.06312   CCATAGGTACTTTGT  CAATAGCCTAGGCCAGCAC TAA GTGCTGGCCTAGG-TAGGG  TTAACTAGCGGATTT 100 383
        pdhR  740053 ..  740066 +  -5.3  -3.61517   ATAACTCGTTTTGGA               TTCTC ATTT GAGAA                TTATTAGCGGCAACT  59 78
        aceE NONE
        aceF  744407 ..  744431 + -17.2  -3.54743   TGGTGATGTAATCGC          CAAGGCCGGC TTCGT GCCGGCCTTG          TTGTGGTTACTGCTC 100 30
        lpdA  746204 ..  746223 + -11.4  -5.93809   TAAATAAAAGTGAAA            CGGTCCCT ACAT AGGGGCCG             TTTTTTTTGTGCCCA 100 97
ISU55_RS03380  746907 ..  746939 + -11.3  -4.16943   CCTTATAGGCGCATA      TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA      TTTTAGCCTATACGC 100 99
        acnB  750053 ..  750073 + -16.1  -4.45168   TCGCATCAGCTAAAA            CGGGGGGCC ATT GGCCTCCCG            TTTCTATTTTAAAAA 100 78
ISU55_RS03390  750919 ..  750942 +  -5.2  -5.27477   CGTGAAATAGGATAG          GGCCGCGACCA GTG TGG-CGTTGCC          TTTTTTCATTGCGCT  86 286
        cueO  756264 ..  756287 + -18.2  -5.24129   TCAGCGCCTGAGCCA          CACCCCGGTC GGTT GACCGGGGTG           TTTTTTATAAAACCG 100 30
         hpt  757298 ..  757312 +  -7.8  -4.57341   AATACCATATACCCA               GCCGTG GAT CATGGC               TTTTTGCCCGCGCTT  79 308
ISU55_RS03430 NONE
ISU55_RS03435  759778 ..  759830 +  -3.5  -3.64103   TATTCCCTTCCCTTT GTCCTTGGCGCTACAGCGGCGCTCG TTTGC TGA-C-TTGCTGTAACACCAAGGGC TTTGCAATGTGGGTA  53 43
        hrpB  772184 ..  772198 +  -4.2  -2.55267   GATAAGTGATATATC               ATGGCT GAT AGCCAA               TAAATTCAGATGTTT  45 32
        mrcB  774783 ..  774816 +  -8.7  -5.95539   GGTCAATAAAATGTG     ACGGCGGGCGTGGTT TACA GACTGCGCCCGCCAA      TTTTTTTCTTTGCGC 100 48
        fhuC NONE
        fhuD NONE
        fhuB  779055 ..  779086 +  -6.6  -3.61398   GAGGGTTGTCAGCAG      TCTGAAATCTCCTC CGGA GAGGAGATTAGAGG       TTATTGACAAAGAGC  65 122
        clcA  782442 ..  782468 +  -8.1  -3.10796   TAATATAACATTAGC         CCTGAGTACTT GAATG AAATACTCAGG         TATTAGATAATCGAG  63 38
        erpA  783166 ..  783189 +  -6.6  -5.31275   AGCATCGCTAAAAAA          CCGCGACCAT GAGA ATGGCAGCGG           TTTTTTATGCTCAAA  89 282
         dgt  787343 ..  787355 +  -3.3  -3.83466   ATACGGCATTAGTCG                GCCAC ATA GTCGC                TATTTATTCATTTTT  53 169
        degP  788956 ..  788980 +  -9.3  -5.15526   TTCCATCTAGCTCAA          GGGCACAGT TTATCTC GCTGTGCCC          TTTTTGGTTTTCTAT 100 139
ISU55_RS03560 NONE
ISU55_RS03565 NONE
        relA  794616 ..  794637 +  -4.3  -3.00704   ACATTTCGGGGGCGT           GGCGGGTCG CAAT CAATCTGCC            TGTGCTTTCGACGCT  47 154
        mazG NONE
        pyrG  797395 ..  797418 + -13.1  -3.02109   AAATATTTGGTGGTA          GGGGGCGGC TGAGAT GTCGCCCCC           TCTGTCTGGAGTTTT  95 40
         eno  798828 ..  798841 +  -9.5  -5.66684   CTAATTAATTAAAAA               CCCGC TTCG GCGGG                TTTTTTTATGCGTTG 100 97
ISU55_RS03590  799752 ..  799773 + -10.2  -3.72576   TCTGATACAGTTAAA           CTGGCTAC CCGAGC GTAGCCAG            TTTGGTGGAGGCCGG  82 44
        queE  800519 ..  800535 +  -4.3  -4.19817   CTTGATACCCTTCGT              CCTTGAC GCT GTCGCGG              TTTTAGCTGGATGGA  61 36
        cysJ NONE
        cysI  805187 ..  805199 +  -4.1  -4.15841   TTGGGCATTGGATAA                TTTGC CTG GCGAA                TTTGTCCTTTCCTCC  61 150
ISU55_RS03620  806389 ..  806407 +  -7.4  -4.11216   ATATCGGGGAAATAA             CCGTCGAA TCC TTCAACGG             TTTTGAAGATGAAAA  71 379
ISU55_RS03635 NONE
        cobA NONE
        cysD NONE
        cysN NONE
        cysC NONE
ISU55_RS03660  812416 ..  812426 +    -4  -3.56568   CTGCTTACGGGTTGG                 TGAA CGC TTCA                 TTTACCCGATGATTC  52 23
        ftsB NONE
        ispD NONE
        ispF NONE
        truD NONE
        surE NONE
ISU55_RS03690  816880 ..  816894 +  -2.8  -3.60006   GCCTTCACCTTTAAC               TACCGT GTA AAGGTA               TTTGGACATATCGTT  50 75
        nlpD NONE
        rpoS  819091 ..  819118 +  -7.1  -5.66684   GATGAAACACAACAA        CGGTGAACA GATAGATAAA TGTTCACCG         TTTTTTTATGCCTTG 100 128
ISU55_RS03715 NONE
ISU55_RS03720 NONE
ISU55_RS03725 NONE
        dhaL  827758 ..  827776 +    -6   -4.4773   AGGAGTGAACCAGCC             CAGCTCTA CCA TATAGCTG             TTTTCGTTCATATCA  73 446
ISU55_RS03775  837359 ..  837369 +  -2.6   -4.3208   ATTATTCTAATGGCT                 TAAT CTC ATTA                 TTTTACCTTATACCG  59 366
ISU55_RS03780  838879 ..  838900 + -11.5  -3.07994   CCGAAGAGTAAAACG           TCCGCGCCA GAGA TGGCGCGGC            TTGAATGGCATTCAG  84 266
        pheA  850701 ..  850714 +  -2.4  -3.72576   AGCGCCTCACCAAAG               CGTT TGTAGT AACG                TTTAATCAGCGCCAG  50 284
        yehT  853750 ..  853762 +  -4.8  -2.78216   CGTCAAGCTGCATGT                GCGT TGGCT ACGC                TCGTTACTCCGGGTA  49 75
ISU55_RS03855  856767 ..  856785 +   -16   -4.8048   AGCACAAATAAATAT             CCTCCGGC ATA GCCGGAGG             TTTTTCATATGCGCC 100 229
ISU55_RS03865 NONE
ISU55_RS03870  859396 ..  859414 +   -16  -4.36914   GAAAGCTTTACTGAA             CCCCCAGC CTA GCTGGGGG             TTTTCTGGGCACAAA 100 364
ISU55_RS03905 NONE
ISU55_RS03910  865457 ..  865475 +   -16   -4.8048   AGTTTAAATAAATAT             CCTCCGGC ATA GCCGGAGG             TTTTTCATATGCGCC 100 64
ISU55_RS03990  878008 ..  878020 +  -4.9  -2.85668   TACAACGCCATCACC                TCATT CAC AATGA                TATGATGTCACAATG  49 13
ISU55_RS03995  879310 ..  879323 +  -4.5  -4.10164   GCGTCATTGGGGTTT               GTCAG CAGT CTGGC                TTTGTATCGTGATCC  63 123
        katG  891458 ..  891487 +  -8.7  -3.85698   AAATAACTAACTAAA       TAGAGGGGAGGA TTTATCT TCC-CCCCTCTA       TTTATAAGAGAAGAA  78 31
        cybC NONE
        cybB  892624 ..  892643 + -13.6  -4.09685   TGTTCCGTTTCTCTT            TGTCCCGC GTTT GCGGGACA             TTTTAAAGAATGCAA 100 59
ISU55_RS04080 NONE
ISU55_RS04085  901599 ..  901617 +   -16  -3.07307   ATTGTGCCCAGAAAA             CCCCCAGC TAG GCTGGGGG             TTCAGTAAAGCTTTC 100 145
ISU55_RS04090  902268 ..  902288 + -12.5  -3.76167   AGGCGCATATGAAAA            ACCTCCGGC TAT GCCGGAGGA            TATTTATTCGTCTTC 100 105
        rluD NONE
        pgeF  905887 ..  905901 +  -5.7  -3.83998   ATAACCTTGAAAAAT               TGAGG GATGA CCTCA               TTTAATCTCCAGTAG  63 99
        clpB  908532 ..  908549 + -12.7  -5.54403   TAGCTGATCCTCTAA             GGGGCGA GAAA TCGCCCC              TTTTTGTTGTTTTTT 100 41
ISU55_RS04120  910639 ..  910662 +    -3  -3.81929   TAACGAGCAAATAAA          GCCGGGCTGA GAAA TTGGTCGGGC           TTTAGTACCTTGTTG  53 90
ISU55_RS04125 NONE
ISU55_RS04130  910889 ..  910935 +  -3.9  -3.45839   TCCACCATATAAAAC TATTTCAAAACGTACTGCGGTC GCAA GGCA-CAGTGTGTTGTGAAATA TTGCTCTTTAACAAT  51 34
ISU55_RS04135  914010 ..  914020 +  -6.8  -4.27316   GGCTTAACCTTACAA                 CACC GAA GGTG                 TTTTGAATTGAGAGA  74 30
         rrf  914248 ..  914268 + -10.4   -4.8048   CAAATAAAGCCAAGA            CCCCATGC CCAAA GCGTGGGG            TTTTTGCTGTGCGCG 100 43
ISU55_RS04170  922046 ..  922102 + -13.8  -3.40775   GAGAGACGTTTTAGA ACGGTAAAAATAAAAGGGGGCGCTGA TGAGT TCAGGGCCCCCTTTTTTGTTGACCGC TATTTGGCTAAAAAT 100 60
ISU55_RS04220  932005 ..  932021 +  -5.8  -3.78233   CAGTAGTCGTTTTAA              TGCACC TAAAT GGTGCG              TTTCAATCTTCGTAT  63 148
ISU55_RS04225 NONE
ISU55_RS04230  933666 ..  933680 +  -4.2   -2.8552   GTCGATACTTTGGGA               GCCATG CCT CATGAC               ATTTACTGACTGGGA  46 12
ISU55_RS04235 NONE
ISU55_RS04240  935039 ..  935059 +  -3.9  -3.06418   TCGTCAGTCCGCGGT            TTATCTGGC CCT GCCTGATGG            TGATTTATATAAAGG  46 8
ISU55_RS04245  936360 ..  936375 +  -4.6  -4.37092   CGGGGGGCCATTACT              CCACGC TGAA GCGTCG               TTTTATAACGGCCCT  66 374
ISU55_RS04260 NONE
ISU55_RS04265  939770 ..  939780 +  -8.2   -4.8622   AACGCCAATGACGTC                 GGGG ATC CCCC                 TTTTTACTTGACGCC 100 111
ISU55_RS04270  940552 ..  940588 +  -2.4  -5.66989   TCAAATTGCTGTTTG   CCGTAAACCTGTGAC GGCAATTA GTC-TAAGTTTACGG    TTTTTTTAGTGTTTA  82 506
ISU55_RS04275  942814 ..  942826 +  -9.1  -3.16668   CTGGTTCTGGCCCAT                CCGGT GTT ACCGG                TTAATGGCCATGTTG  69 276
ISU55_RS04285 NONE
ISU55_RS04290  951201 ..  951226 + -11.9  -3.62723   TTATTAAACATAAAA         CTAAGCCTCCT TAAT GGGAGGCTTGG          TTGATTATTTCGATA  93 132
        lpcA  954540 ..  954580 +  -4.8     -2.59   AAAAGCCTGATGTGC TGGGGTGATCAACCGCGGT ATTA ATCAAG-TTGATCACCTCA  ATCTTCTGTGAACAT  48 31
ISU55_RS04305  955700 ..  955717 +  -2.7  -4.72272   TGTCATACGGAAGGG             GTAGATA CTGA TATCCAC              TTTTTCCTGACCAAA  66 215
ISU55_RS04315 NONE
ISU55_RS04320 NONE
ISU55_RS04325 NONE
ISU55_RS04330 NONE
        nqrE NONE
        nqrF NONE
ISU55_RS04345 NONE
        nqrM  964009 ..  964047 + -22.6   -3.2557   TTTTTATCTGACAAG   CAAAGCCCCCGAACGACG CAT CATTGTTCGGGGGCTTTG   TTGCTCAATTATTGT 100 154
        dinB  966721 ..  966742 +  -2.2  -5.00616   TTGGCCCAATCGACA           CCATGTCC ATGTTA GGATAGGG            TTTTTTGAACAAACC  70 261
ISU55_RS04370  971290 ..  971310 +  -2.5  -2.57405   TTATAGAATAATACC            CGCTGATAG AGA CGATTAGTG            ATGTGTTCTTACTGT  41 470
         gpt  974308 ..  974337 +  -9.3  -4.69326   ATAATTTACTGTTCT       TTAAGCGTCCGGT GCCT GCCGGACGTTTCA        TTTTCTCTTCAGTAT 100 37
        frsA NONE
         crl  976187 ..  976217 +  -9.1  -3.83205   CATAAACTGTCCCCA       TTACCCCCTTTCT GCACA ATAAAGGGGGTGA       TTTCGTATCAAGCCT  78 81
        proB  977719 ..  977734 +  -4.6  -4.37092   CGGGGGGCCATTACT              CCACGC TGAA GCGTCG               TTTTATAACGGCCCT  66 333
        proA  980723 ..  980750 + -13.6  -5.78622   AAAATCGCTAGTAAA        GCGACATGTGGCA ATT TGCCA-ATGTCGC        TTTTTTTTCAAATCA 100 109
ISU55_RS04420  981816 ..  981826 +  -6.8  -2.52464   AAGCCCACAGGGAGC                 GCCT CTG AGGC                 TACCTTGAGAAGACA  55 116
ISU55_RS04425 NONE
ISU55_RS04430  983140 ..  983150 +  -2.4  -3.18118   TATTTCATATAATCT                 CTCC GTA GGCG                 TCTATTATGAAATGA  43 221
ISU55_RS04435  984403 ..  984423 +  -3.2  -5.21709   AGTAAACCTGTTCAA            CCGGCC AATAATAAC GGTCGG            TTTTTTGATGTCGAA  75 197
        aroL  985068 ..  985104 +    -4   -3.5394   TGGTTGATTGCTAAT   TAATTATGCAGGT-ATA CAAT TGTCACCTACATAATTA    TTTGGAAACGCGTTT  52 91
        ppnP  985803 ..  985833 + -11.9  -2.91086   TTGAGTTAGCGAGTC       TGTCACCCTCTCT ATGCC AGAGGGGGCGACA       TATCATCTATCCTTT  86 49
         mak  988668 ..  988696 +  -5.9  -3.42069   TAATGAGCCTCATCC        TTGAGGCTTACCC TGT GGGCTAGCATCAA        TGTTGTTCAAATTGA  59 520
        phoB  994674 ..  994684 +  -3.2  -3.65991   CTGAGTTTTCAGTGC                 CGGA GAA TTCG                 TTGTGTTAGAACGCT  51 37
        phoR NONE
ISU55_RS04480  997221 ..  997233 +  -5.5  -3.19789   ATTTATCTGATATTC                TCGCT ATG AGCGG                TTAACTGTTGGCTAT  53 157
        brnQ  998907 ..  998927 + -11.1  -4.72272   AATAGAGTATTTTTA            GCCACGGTT AAT ATCCGTGGC            TTTTTGCTGAAAAAA 100 50
        proY 1000391 .. 1000417 +  -6.5  -5.85244   GATAATCGATACAAA         GCCGGGGTACA GTTCA TCTGTCCCGGC         TTTTTTCTTTTAATT 100 67
        malZ 1002776 .. 1002811 +  -4.7  -5.52986   GATAACTCACTAGAG    CAGCTCAGGGATAAC AATTCA GTGATAACTGAGCTG     TTTTTTTGCTCCAGT  87 62
ISU55_RS04505 1003938 .. 1003948 +  -8.2  -3.07522   AATCAACTCCGCTGC                 GCCC CAA GGGC                 TCTGTTCAACCATCT  62 389
        queA NONE
         tgt 1009945 .. 1009966 +  -2.9   -4.3898   TATTTATAGAGAGAG           CAGTTACGA TTTG TCGCGGCTG            TTTTATCGCACTGAT  59 61
        yajC NONE
        secD NONE
        secF 1013245 .. 1013267 +   -15  -5.24129   CGATGTATAAGATAG           CCCTGAAACT GTT AGTTTCAGGG           TTTTTTGTGCCCAGA 100 60
ISU55_RS04550 1013949 .. 1013981 + -11.3  -4.43501   CCTTATAGGCGCATA      TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA      TTTTATCAGTAAATT 100 99
ISU55_RS04555 NONE
ISU55_RS04560 1015489 .. 1015500 +  -3.6  -4.36554   AAGCACACATTCGAT                GGCT GATC GGCC                 TTTGTTGTCATCGTA  63 20
        nrdR 1016086 .. 1016096 +  -5.4   -3.0634   TATCTATGTCTTAAC                 CTCA AAT TGAG                 TCTTAACCTCAAATT  52 97
        ribD 1017310 .. 1017323 +  -2.3  -4.11216   TCCCCTGCTAATCAC               GGCCT TGTC AGGCG                TTTTACAAATGCGCA  55 62
        ribE NONE
        nusB 1018496 .. 1018526 +   -20  -2.95091   TATACATTAACGATA       TAAATTAAGGCCGG TAT CCGGCCTTAATTTA       TATATCAGTTAACAT 100 205
        thiL NONE
        pgpA 1020107 .. 1020125 +   -16  -3.07307   ATTGTGCCCAGAAAA             CCCCCAGC TAG GCTGGGGG             TTCAGTAAAGCTTTC 100 108
ISU55_RS04595 1020770 .. 1020802 + -11.3  -4.13973   CCTTATAGGCGCATA      TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA      TTGTTTCTGATATCT 100 99
        thiI 1025958 .. 1025987 +  -7.9  -4.19974   CCCGATAATTATAAA       TT-CCTGGCGGCAA CAC TAGCTGCCAGGCAA       TTTCTTCCGCCTTTT  76 113
ISU55_RS04630 1028190 .. 1028219 +  -8.5  -3.44622   GGTATAACGACTAAA       GGGGCAACGGCTT TTTC ATGTCTTTGCCCC        TTAATTCTGGCCCTA  71 90
        bolA 1039225 .. 1039250 + -10.5  -4.12532   AGTAGATGAGAATTT         TACAAACGGCT CTAG GGCCGTTTGTG          TTTCTGTATAGGCGA  91 92
         tig 1040934 .. 1040959 + -11.1  -5.50723   ATTTTGATTGATTAA         GCCCGTCGCCA TTAT TGGTCACGGGC          TTTTTCTTTTGGTAA 100 80
        clpP 1042076 .. 1042090 +    -5  -2.62396   GGTATATCGGCTATC               CGTTGA ACG TTAACG               TGATGTCCAGAAATA  48 137
        clpX 1043475 .. 1043493 + -13.2  -4.91852   CAGTTAGTATGACAA             TGGGGGAT TTT ATCCCCCA             TTTCTTTTTCCTCGC 100 59
         lon 1046024 .. 1046051 +  -6.3  -4.25873   ATTGATAAAACTAAT        GCTGGTAAGTG AAATCC TGCTTGCCAGC         TATTTTTTGTGCCGC  72 59
        hupB 1046565 .. 1046584 +   -10  -5.24129   AAGGTAAGATACAAG            GCGCATCG TTTA TGATGCGC             TTTTTTGTGCCCAGA 100 110
ISU55_RS04710 1047266 .. 1047298 + -11.3  -4.74103   CCTTATAGGCGCATA      TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA      TTTTTCGCTTAGCCC 100 99
        ppiD 1049417 .. 1049432 + -10.4  -3.66139   ATGTAATAAAAGAAA              GGTCGC TTTG GCGACC               TTTCGCATATCTGTG  82 64
ISU55_RS04720 1050085 .. 1050128 +  -8.8  -4.08945   AAGTTGGTAAATCAA GCCGCCAGGC-GGTGCTGGCC ATC GGTAGGTATTGGTCTGGCGGC TTTTACCAACATAAT  83 146
ISU55_RS04725 1050779 .. 1050804 +  -6.2  -2.99471   TTGAGAGCGTGTGTT         GCGGCCATATT ATATA GATA-GGCCGC         TATATATCAGGCTAA  56 79
         cof 1054423 .. 1054438 +  -6.1   -5.8187   ATAGCTATTAGCCAG              CCGGA GAACCA TCCGG               TTTTTTTCTTCCGTA 100 45
ISU55_RS04750 NONE
ISU55_RS04755 NONE
ISU55_RS04760 1059935 .. 1059956 + -13.7  -4.22554   GAGTTAAGCAGCACG           CGTGGGGTG ATGT CGCCCCACG            TTATTTATTGACTCA 100 34
        glnK NONE
        amtB 1062172 .. 1062207 + -12.6  -4.01419   TACATAATAATGATG    AACTACAGGGGCGATG GTGA CATCGCCCCTGTGCTA     TTTCATTGATTCATC 100 194
ISU55_RS04780 1063934 .. 1063944 +  -8.2  -2.80935   TTATTTGACGTTGCC                 GCGG ATC CCGC                 TCTAATAACTGGCGT  64 58
         ffs 1064908 .. 1064919 +    -3  -5.27335   TTGTCGTGAACGCTC                TCTA TCAG TAGA                 TTTTTATTTCCGGCA  79 161
        acrR NONE
ISU55_RS04835 1073679 .. 1073710 +  -4.5  -3.69684   CTTCACCCTCTTTAT      CGTTATTCGTG-TC ATCAA GAGCACGAATTGCG      TTATTCGATCCATTT  57 256
        mscK 1077306 .. 1077326 +  -3.2  -3.29541   ACGGTTGTTAGAGAA            CCAGTGCT GCGAA AGGGCTGG            TGTTGTGGTAATGCT  47 225
ISU55_RS04855 1078950 .. 1078960 +  -4.6  -3.70853   AGTGTTTCGTGCGCG                 GGGG TTA TCCC                 TTGTTACGTCCTTAA  57 86
         apt 1079841 .. 1079855 +  -5.7  -4.58424   GTTAAGGTATTCCAG               CCAGA CAAAC TCTGG               TTTTATATCGTCATA  75 175
        dnaX 1082325 .. 1082358 +  -8.9  -2.75844   TCCGACCAATTTAAC     CGCTGCGATAAGTGCA TGG TGCACTGA-CGCAGCC     CTTTGCGATGAGAGA  67 27
ISU55_RS04870 1082691 .. 1082704 +  -2.3  -2.64099   ATGCAATTGCCACCA               GGCTT TAAG ATGCC                GTTCTGATGCAAACC  40 5
        recR 1083354 .. 1083368 +  -3.6  -4.64676   TGACCTTATTATTGA               TTATCT TAC GGATAA               TTTTATTCAGAATAA  67 63
        htpG 1085395 .. 1085423 +  -6.8  -5.56673   TAATCGATAAAAAAA       CACCCTTGTTCAA CGTA TTGC-CAAGGGTG        TTTTTTATTGTACCT  91 38
         adk 1086269 .. 1086299 +   -17  -3.59979   TTCTGGATGGCCTTA       TAGCTAAGGCGGTT TAA GGCCGCCTTAGCTA       TTTCAAGTAAGAAGG 100 41
        hemH 1087558 .. 1087569 +    -3  -3.58343   GGTGCTTAACTTAAC                TTAC ATCT GTAA                 TTTCGGAATGCTCCG  51 278
ISU55_RS04895 NONE
        rfbF NONE
        rfbG NONE
        rfbH 1092123 .. 1092138 +    -9  -5.58454   TTTAACAGGAGCAAG              GAGGCA ACAC TGCCTC               TTTTTTTAATATGAA 100 36
ISU55_RS04915 NONE
ISU55_RS04920 NONE
ISU55_RS04925 1095703 .. 1095714 +  -2.2  -3.87075   ATAATATAGAGGATA                GGTG ATAA TACC                 TTTATGAAAAGTAAT  51 21
ISU55_RS04930 1096422 .. 1096440 +  -6.2  -3.57263   ATGTTATTTCAGATT             TTATAATT AAA AATTATAA             TTTAAGAATGAGGAT  61 16
ISU55_RS04935 1098315 .. 1098333 +    -6  -4.63863   TCCCATATTTTCTAT             TACAGCAC CCA GTGCTATA             TTCTTTTTCTATTAC  75 387
ISU55_RS04945 1100654 .. 1100666 +  -6.3  -3.72695   ACTTGACTGACACGT                CGAAT TTA ATTCG                TTTGGTCCAGGAAAT  63 246
ISU55_RS04955 1102632 .. 1102652 +  -4.1  -2.55508   AGTTGGTTAATTAAG            TTTTAACTT AAT AAGTAAAAA            ATATTATCGGGTTTC  45 115
ISU55_RS04960 NONE
ISU55_RS04965 NONE
        cpsG NONE
        fepE 1107494 .. 1107521 +   -12  -4.02581   AACGAATTTATCTAA        CGGCTGGGTGAG GTTT CTCATCTGGCCG         TTCTGTTTTATCACC 100 47
ISU55_RS04980 1109000 .. 1109034 + -13.6  -5.06816   GTAGACGCGGGATAT     AAGTCAGGGCCAGCAT AGT AAGCTGGCCCTGATTG     TTTTTATTACAGAGT 100 45
        cueR 1120429 .. 1120474 + -13.5  -3.80114   AATACGCTGCCGTGA TAAATAACCCGAATCACCTAC CAGA GTAAGTGATTCGGGCTGTTTG TTTACTGCCTTGCTG 100 39
ISU55_RS05050 NONE
ISU55_RS05055 1127925 .. 1127949 +  -9.9  -4.04491   TAGTGGATTTTATTC          GCGGGCAGC AGCAGAG GCCGCCCGC          TTCTTGTTATAACTT  86 38
        cysS 1132826 .. 1132856 + -11.3  -5.60993   ATAGTACTAAAAAAA      TTGCGGTT-CTGGT GTTT ACCAGTAACCGCGA       TTTTTTTGTGCCCAG 100 191
ISU55_RS05085 1133543 .. 1133567 +  -9.9  -4.46854   ATAGGCGCATATGAA          AAACCTCCGGC TAT GCCGGAGGATA          TTTATTGTTCAATAG 100 103
ISU55_RS05100 1135049 .. 1135072 +  -3.1  -2.73159   GCCATTTAGACGGGT          CAGGTAGTG ATTTAG CACTTCTTG           CTTTGAACCCATTCC  42 78
ISU55_RS05130 1137679 .. 1137690 +  -5.8  -2.53015   CCCCGTATATTGCGC                GGTG TTAT CACC                 TCCGTTCAGCCATGT  52 139
ISU55_RS05135 NONE
ISU55_RS05140 NONE
ISU55_RS05145 NONE
ISU55_RS05150 NONE
ISU55_RS05155 NONE
ISU55_RS05160 1143563 .. 1143578 +  -3.2  -3.33696   AGTTCCGTGCTTTAT              CTGACG TTAA CGTTGG               TTGATTAGGCGAGCC  47 2
ISU55_RS05165 1144170 .. 1144187 +  -7.7  -4.61231   GCTGAAATCGAATAC             CGGG-AGC AGG GCTTCCCG             TTTTTGGGGGTCTAA  86 207
ISU55_RS05180 1147352 .. 1147374 +  -6.2  -4.82901   TGCAGTTTTGTGGTT           CCGGGGATTG GCA CAATCCAAGG           TTTTTGTGCCAACAA  78 234
ISU55_RS05195 1151407 .. 1151423 +  -2.1  -4.76041   TCACCGATAAAACGG              GCGACGA TCG TGGCCGC              TTTTTCATACGTCTG  68 267
ISU55_RS05215 1158378 .. 1158391 +  -3.1   -4.4078   GTTGCGAGTTCTGCG               TGTTG GCGA CAACG                TTTTCATTAACAGCG  61 229
ISU55_RS05240 NONE
ISU55_RS05245 NONE
ISU55_RS05250 1163691 .. 1163717 +  -4.5   -3.2672   TCACAACACCCAGCA         TGGCTAACATA GCGAA TGTATTAGCCA         GTTTATTATTCACCT  50 174
ISU55_RS05270 1166397 .. 1166423 +  -8.1  -5.16237   AAACGCGAGATTGCT        GCCCCACAATGGT GTG ACC-T-GTGGGGC        TTTTTTGATCCCCTT  95 66
ISU55_RS05280 1169659 .. 1169691 + -11.3  -4.69464   CCTTATAGGCGCATA      TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA      TTTTTCAGCTATTTT 100 99
ISU55_RS05300 NONE
        iolD 1182293 .. 1182310 +    -7  -2.95298   AATATTGCCGCCCAC             CCAGAG ACCACC CTCTGG              TCTGTGGTGGATCCC  58 388
ISU55_RS05315 NONE
ISU55_RS05320 NONE
ISU55_RS05325 1186885 .. 1186895 +  -2.4  -2.83409   CTACGCCAAGAACCG                 TCGC GGC GCGC                 TGTAATACGTTCATG  41 10
ISU55_RS05330 NONE
        iolC NONE
        iolE NONE
        iolB 1192030 .. 1192041 +    -3  -5.24551   TTCATTGTAAATAAC                CAAA TTTC TTTG                 TTTTTATTCGTTTGA  75 98
ISU55_RS05355 1194538 .. 1194548 +    -4  -4.07877   GCTTCCAATTTTGTT                 TTAG CCA CTAA                 TTCTTTATACAGTGG  59 246
ISU55_RS05365 1195291 .. 1195344 +  -5.4  -2.74605   TACACTGATATTAAA TAAGCCACCTGCGTGATGTGAACCTC TATC GTGG-TCATTTCAT-CTGGTGGCTTA TCAATTTTAAAACCA  50 59
ISU55_RS05380 1198042 .. 1198058 +  -3.7  -4.22652   TGTCACATTTTGGAA              TGTTGTT ATC GACAGCA              TTTTCAGTGGTATGG  61 423
        cspE 1198952 .. 1198969 + -10.5  -5.28176   CCATATCTTTAAAAA             CCCGCCT TACT GGGCGGG              TTTTTTATGGGTAGC 100 46
        tatA 1200650 .. 1200670 +  -9.7   -5.1675   GGCTGATAAAAAAAA            CGGATCTCC AAT GGAAATCCG            TTTTTTGGTGGCTGC 100 114
ISU55_RS05470 1216168 .. 1216178 +  -8.2  -2.87319   GGTTAGCCACTTTGC                 GGGC GAA GCCC                 ATTTCGTGGGTTACC  60 287
        ubiF 1227481 .. 1227505 + -16.5  -2.73364   TACTGCCTTTCTGCC          TGAGCCCGGTA TTC TGCCGGGCTCA          TCATTCCGCTGACGG 100 203
ISU55_RS05580 1237349 .. 1237372 + -15.4  -5.60993   TTTTAATCGAACCAA          CGGGAAGAGA GCGA TCTCTTCCCG           TTTTTTTGTGCCCAG 100 116
ISU55_RS05585 1238051 .. 1238090 +  -9.4  -4.88918   AGAGCCTTATAGGCG  CATATGAAAAACCTCCGGC TAT GCCGGAGGATATTTAT-TG  TTTTGTTTGCCGTAA 100 95
        glnS 1239873 .. 1239892 + -10.7  -5.43414   CGCTCAGATTCAATT            GGCGTGG CACAGT CCACGCC             TTTTTTGTCTCTGAT 100 48
ISU55_RS05595 1242473 .. 1242495 +  -4.8  -2.56449   AATGGCGTTGATTGC           GCCAAATTGG GTG CTGATTGGGC           ATCTTGTAATAAGGT  47 521
ISU55_RS05625 1249535 .. 1249548 +  -9.5    -3.737   TCTTGATTAACTATT               GGGGC GAAC GCCCC                TTTCGTAGAAGGTTG  78 45
ISU55_RS05700 1262505 .. 1262524 +  -9.3  -5.63504   CAGGTTAATCCCAAT            CACCCAC TTAATT GTGGGTG             TTTTTTTATAAGCTT 100 65
ISU55_RS05705 1263693 .. 1263711 +  -2.4  -5.10933   CCATCTCTTGCAACA             TCGATTCA ATA TAAATCGG             TTTTATTTTCAGTAG  74 440
        cspA 1265094 .. 1265111 +  -9.1  -6.25741   AAATAGATTTAGAAG             CCTCGTC TTTT GACGGGG              TTTTTTTTATTATTT 100 71
ISU55_RS05725 NONE
ISU55_RS05730 NONE
ISU55_RS05735 NONE
ISU55_RS05740 NONE
ISU55_RS05745 1271030 .. 1271043 +  -3.9  -4.57275   TCTTGCCGTTAGCCA               TCTTA TCCA TAAGA                TTTTACGTTTTTTTG  65 395
ISU55_RS05750 NONE
ISU55_RS05755 NONE
ISU55_RS05760 1274525 .. 1274539 +    -2  -3.61536   AATACTCAAAGTAAG               TAGGGT ACT ACCCGG               TTTCAGCATTCAGTT  49 95
        ureE NONE
ISU55_RS05770 NONE
        ureG NONE
         yut 1279101 .. 1279113 +  -2.7  -2.59668   AGTAGCGATTAAATT                TAAGA CAT TCTTG                GTTCTGAACATGTTA  41 36
ISU55_RS05790 1280381 .. 1280414 + -15.5  -5.77853   AGGCTAACAAATAGA     GACACTCATTAACCG ATAA CGCTTAATGAGTGTC      TTTTTTTTACAGGTT 100 109
         kch 1282628 .. 1282649 +    -8  -5.93809   GTGTTTATATCAAAA           CACCCTCG GTTAAG TGAGGGTG            TTTTTTTTGTCACGA 100 65
ISU55_RS05820 NONE
        chbC 1286258 .. 1286269 +  -4.4  -3.43676   GTTTTGGCTCAAGGC                CGAT AAAA ATCG                 TTATGGATTGGTCCG  52 67
        chbA 1286732 .. 1286746 +  -2.7  -2.85216   AAAAAATTCAGTGAT               ACGCC GACGG GGCGA               TAATTCTCAATGGTA  42 27
        chbR NONE
        chbG 1288647 .. 1288666 +  -7.8  -3.40403   AGACATCACAGATAA            TGCCCCCA TTTT TAGGGGCA             TTATCCTACAAGAGG  66 250
        seqA 1290126 .. 1290161 +  -7.6  -2.88861   CATTGAAACCATCCT    CTTTCTCAGCCAATGGC AAC GCCCTTG-CTGAGGACG    TGTATAGGAGTAGTG  61 44
         pgm 1291878 .. 1291901 + -11.8  -5.53079   TTGGCACTCGATCAA          TCCGGC-ACAG GCT CTGTTGCCGGA          TTTTTTATGTGTTTT 100 80
ISU55_RS05860 1292872 .. 1292898 +  -7.2   -3.0814   CTAAAAATAGCGCCA         TCACCACCGC CCGTACA GCGGTGGCGG         TATTAGCATCTAAAT  59 458
ISU55_RS05905 1302163 .. 1302187 + -12.1  -5.16237   TACAAAAAATAGCTG          GCCCGTGAGTA TCA TGCCCACGGGC          TTTTTTAATGCGCTT 100 77
ISU55_RS05910 NONE
        phrB NONE
ISU55_RS05920 NONE
ISU55_RS05925 1306461 .. 1306481 + -13.3   -2.9518   GGATAGGGCTATTTT            CGCCGATGT TTA GCATCGGCG            TGTCTCCGTCTTACA 100 47
ISU55_RS05940 NONE
        pxpA 1309417 .. 1309433 +  -2.4  -2.51849   ACCTCGGGCAGAATA              TATTTA TCACT TAAATA              CGTTTTACATTATTG  39 50
ISU55_RS05950 NONE
ISU55_RS05955 NONE
         pcp 1312257 .. 1312271 +  -9.2  -3.32844   AAGGTTAGCATGAGA               GTGGGC TTT GCCCGC               TTCTACCGTCAGGAC  67 401
        grcA 1313443 .. 1313458 + -10.4   -5.1675   AATCATAAAGTGATA              GGGGAC TTCG GTCCCC               TTTTTTCATGCCTGA 100 74
ISU55_RS05975 NONE
ISU55_RS05980 1315412 .. 1315423 +  -2.2  -4.71222   TCACTAACCAGCACT                CTTG GTAT CAGG                 TTTTGCTTTTGGTGT  63 168
ISU55_RS05990 1317874 .. 1317900 + -10.1  -3.82218   CATCTATGTAGGCTC        GAG-CCGCGCCA TCCT TGGCGCGGACGC         TTTACTCCTCTGCCT  84 176
        rpoE NONE
        rseA NONE
        rseB NONE
        rseC 1322497 .. 1322512 +  -3.4  -3.35073   ATGCGTATTCAGTAA              TAATAA GACG TTATTA               TTGATTAGGCATGAT  47 26
        lepA 1325679 .. 1325691 +  -3.4  -4.16205   TAAATAAGGAGTTTT                CATG GCTAA CATG                TTTGCTTTGATTCTG  58 34
        lepB 1326942 .. 1326954 +  -2.7   -3.3352   GGGAGCCACTGCAAA                CGAAA CAG TTTTG                TCTTGGTTACTTTTG  46 289
         rnc NONE
         era NONE
        recO 1329433 .. 1329444 +  -2.2  -3.80452   GGTGTAAACTGAAAA                TCAC TGAC GTGG                 TTATTGGTATGCTTT  51 105
        pdxJ 1330236 .. 1330247 +  -3.6  -3.40611   TGATGCGGGAAGCGC                GCCG TTAA TGGC                 TATTCTTGGGCTAGG  51 18
ISU55_RS06055 1330694 .. 1330712 +   -16  -3.07307   TTTGTGCCCAGAAAA             CCCCCAGC TAG GCTGGGGG             TTCAGTAAAGCTTTC 100 96
ISU55_RS06060 1331363 .. 1331383 + -12.5  -3.70709   AGGCGCATATGAAAA            ACCTCCGGC TAT GCCGGAGGA            TATTTATTGCATACT 100 105
        murQ NONE
        yfhb NONE
        tadA 1335407 .. 1335435 + -14.5  -2.51133   GGTGGCCAGGTGATG        CGCCGCCCAGCAT GTT ATGACGGGCGGCG        GTTGGTGACTAAATC 100 42
        purL 1341365 .. 1341387 + -11.4  -3.60597   GTTTGTCAGCAGTCT           GAAGGGTATT GAA GATACCCTTC           TCTTTATCAATTTAT  90 225
ISU55_RS06115 NONE
ISU55_RS06120 1344797 .. 1344829 + -11.3  -5.00196   CCTTATAGGCGCATA      TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA      TTTTGTTATTTCAAC 100 99
ISU55_RS06125 NONE
        qseG NONE
        glrR 1348831 .. 1348847 +  -3.6  -3.09823   GGCGGGGCCCGTGAT              GGGCCA GCCAA TGCCCC              TGTGGTTTTGAAAGA  48 105
ISU55_RS06140 NONE
        glnB 1350925 .. 1350950 +  -6.2  -5.50499   GCTGAATAACAAAAG         CCCGT-TCGTT GCCAA AACGATGCGGG         TTTTTTTACATATAA  91 64
ISU55_RS06155 NONE
ISU55_RS06160 1353995 .. 1354026 +  -9.4  -2.51173   GCTGCCCTTGCTCAC      CCCCAGTCACTGAG TTAT TTAAGTGACCGGGG       ATTAATGAGCTTCAT  68 330
ISU55_RS06175 1357376 .. 1357397 + -11.5  -3.86202   AAGGCGGCTGTCACC           GTCCTGGCC TCCT GGCCGGGGC            TTTGATCTCATCGGG  95 39
ISU55_RS06180 NONE
         ail 1358376 .. 1358390 +   -10  -3.67976   CCTAACCATGAAAAC               CCACCA TAA TGGTGG               TTTCAAATTGCTGAC  80 47
ISU55_RS06190 1359923 .. 1359948 + -16.3  -3.33815   TAACGGAAATGATAT         CTGAATCAGCG GCGG CGCTGATTCAG          TTGATTGCAAAACAT 100 85
ISU55_RS06200 NONE
ISU55_RS06205 1363125 .. 1363148 + -10.3  -4.96848   TTCCCAATAAAAAAA          GCCAGTCGG CTAACC CTGACTGGC           TTTTTATCTGAAACG 100 70
        trmJ 1365237 .. 1365249 +  -6.2   -2.6176   AGATGCATCAGCAAT                CGCG GTTGG CGCG                GTTATCACTGCCGTT  54 388
ISU55_RS06225 NONE
        iscU 1367459 .. 1367472 +  -3.1  -3.93398   GGGATATGAGCTGGT               TCTCA GAGT TGAGG                TTGTTGTATGTCGAT  56 274
        iscA 1367901 .. 1367918 +  -4.1  -4.28369   GCCATTACAACAACT             TCCAGAG CATG CTATGGA              TTATTTTACGTTATT  63 123
        hscB 1368545 .. 1368559 +  -2.1  -3.72588   CAAGCAAATGACAAA               TCGGT CGAGA ACTGA               TTTGAATGTGGCTTG  49 132
        hscA NONE
         fdx NONE
        iscX 1371194 .. 1371209 +  -8.2  -5.49234   AGTGAATACTGACTG              GGTCGC GCAA GCGGCC               TTTTTTATTGCGTAT 100 36
        pepB 1372643 .. 1372669 + -10.1  -3.42459   TGAATTGAGAAGACT         CAAAGGGGCGC ATTTG GCGTCCCTTCG         TTCATCTTCTCGATG  78 47
        sseB 1373784 .. 1373795 +    -3  -3.58329   GGCGCGGCTCGAGCC                TACA TGGA TGTA                 TTTACGGCGTCTTTA  51 156
ISU55_RS06270 1374262 .. 1374286 +  -9.3  -2.53015   TTAGACAGTTTGACC          GCGCTTTTACC CGA GCTAAAGGCGC          TCAATTGCCACGTAT  68 375
ISU55_RS06290 NONE
         ndk 1386225 .. 1386264 + -13.6  -4.11906   TTAAAATTTGTACAA  TGCCACGCCCCAGTAGAG ACAG CTCTGCTGGGGCGTTCTA   TTATTTATACATTCT 100 152
   trmG/rlmN 1387664 .. 1387674 +  -3.2  -2.90061   AGAATACCATGAGCG                 CCAG AAT TTGG                 TACTTATCTGCATAT  43 133
        pilW NONE
        rodZ NONE
        ispG 1390741 .. 1390753 +  -2.7  -2.97747   TGTGACCGTGTTTTA                TATTG TGC CGATA                GTGTTTTATATTGTG  43 91
        hisS NONE
ISU55_RS06325 NONE
        bamB 1394045 .. 1394067 + -13.4  -4.27117   CCAGTACCTCAAAAA           CGGCTCCTGG GAC TCAGGGGCCG           TTTGTATTCTAAAAA 100 70
         der 1395754 .. 1395780 + -10.1   -3.9749   CTTCCTTGGGAGCTT        GAG-CCGCGCCA TCTC TGGCGCGGACAC         TTTACTCTTCTGCCT  86 144
ISU55_RS06340 NONE
ISU55_RS06345 1397511 .. 1397524 +  -5.2  -2.99649   GGTGGTCTTCAATAA               CGCC CCTGCT GGCG                TCTGTGTCACGCTGT  49 325
        guaB 1400401 .. 1400431 +  -9.9  -5.79595   TAACAATTAGTTAAA       TAATCATCTGGTG CTGGC CATCAGATGGTTA       TTTTTTATTTTAAAA 100 38
        guaA 1402348 .. 1402367 +  -7.8  -5.55769   GCCAGCAGTCTGAAA            CCGCCTTA AATA TTAGGCGG             TTTTTTGTTGTGCCC 100 228
ISU55_RS06365 1403052 .. 1403084 + -11.3   -5.1286   CCTTATAGGCGCATA      TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA      TTTTTATGGTTTTTA 100 99
ISU55_RS06400 1407782 .. 1407798 +  -6.7  -2.91457   CTATTGTCAGGTGTG              TTTCTTA CTG TAAGAAA              TGAATTTTTATCTAT  54 462
        thiD 1409742 .. 1409756 +  -4.3  -3.59979   CGATATCTTTATCAT               TTTCC CGCCA GGAAA               TTTGCACTGCAGGGA  54 284
ISU55_RS06430 1411238 .. 1411274 +  -9.3   -3.8721   CCCGAATCGCCAATG    GCGGAGCAAGACAAGGG CGG TTCTCGCCGTGCTCCGC    TGTTTATTTACTCTG  81 90
ISU55_RS06490 1431068 .. 1431090 +  -3.4  -2.62515   CTTACCCGCCTACTG           GCGAGCTAAA GGT TTTATCTCAC           TGATCTCGAAACGTT  42 17
ISU55_RS06495 NONE
ISU55_RS06500 1433472 .. 1433483 +  -4.4  -3.58209   CGCGATTCATTAGTT                CATC TATT GATG                 TGTTTATCCGTTCAT  54 28
ISU55_RS06505 1434823 .. 1434839 +    -8  -3.22298   TTGACATTGCTGGTG              GTCAGC GCCAG GCTGAC              TTGCTCCTGAATGCG  64 469
ISU55_RS06535 NONE
        pstA NONE
        pstB NONE
         upp 1451794 .. 1451811 +  -8.4  -5.24129   TAAATAACGATGATA             GCCGAC GTGAAA GTCGGC              TTTTTTGTGCCCAGA 100 34
ISU55_RS06575 1452499 .. 1452519 + -12.5   -3.6761   AGGCGCATATGAAAA            ACCTCCGGC TAT GCCGGAGGA            TATTTATTCACCAAA 100 105
         hda 1453489 .. 1453501 +  -6.3  -2.65091   GTTTGCTGACTCATG                CCAAT GAC ATTGG                GTTATCGGTTACGGT  54 200
ISU55_RS06595 1456888 .. 1456909 +  -6.5  -3.62096   TACGTTGATAACAAA           GTCCTGGCT TCTT GGTCGGGAC            TTTGAACTCATAGAA  63 45
ISU55_RS06600 1458316 .. 1458345 +  -2.1  -4.30704   GTATACAGACAAAGA       TATTAGGTCTGCCC CAA GGGCAG-CTGAATC       TTATTATTTTATATT  58 178
        dapA NONE
        bamC 1462038 .. 1462056 +   -16  -3.07307   ATTGTGCCCAGAAAA             CCCCCAGC TAG GCTGGGGG             TTCAGTAAAGCTTTC 100 69
ISU55_RS06625 1462705 .. 1462729 +  -9.9  -4.49556   ATAGGCGCATATGAA          AAACCTCCGGC TAT GCCGGAGGATA          TTTATTTCATGACGA 100 103
        purC 1463663 .. 1463689 +  -8.1  -2.88861   GGTATTCGATCTATC         GATTTCCTACG ATACG CGTAGAAAATC         TGTCTGGGAGTCGTG  61 200
ISU55_RS06635 1464619 .. 1464641 +  -4.9  -3.35813   AGATCTATTCTTCTC          TGATTGGCAC GCTT GTGCCGA-CA           TTGATTGCAATACAG  53 71
ISU55_RS06640 NONE
ISU55_RS06645 1467537 .. 1467557 +  -3.2    -3.889   CGCTTATGATCAAGA            CGGCGTAA CTCTT TAATGCCG            TTTAATATCATTCCC  54 342
ISU55_RS06675 1471932 .. 1471963 +  -9.4  -3.75517   ATAGTGGCTTTATCT      GGG-TGCGCTTGCCT TAT GGGCATGCGCAGTCC      TTGGTTTTATCGGCT  81 37
ISU55_RS06680 1473761 .. 1473772 +    -3  -3.13908   GGTATTGCACTACGT                TTTG GAGT CAAA                 TTACATGATTGAATT  46 2
ISU55_RS06685 NONE
ISU55_RS06690 1475071 .. 1475082 +  -2.2  -5.10497   CTCACCGTTTAATAT                CGCA TCAT TGTG                 TTTTTTCAGTGGCTT  71 29
ISU55_RS06695 1477008 .. 1477032 + -10.7  -3.05993   AATTAAGCCGCCAAA          GGCGGCAAGTA TTT TTCTTGCCGTC          TGTCTATCTCCATGA  79 35
ISU55_RS06700 1478469 .. 1478480 +  -4.4  -4.70659   CAGCGCTAACGGTTT                CTGA TGAA TCAG                 TTTTTCAGTCTCAGG  68 263
ISU55_RS06720 1484459 .. 1484479 +  -2.6  -5.79595   TTAGCGGCCATTAAA            TAGTGACA ACGGA TGTCAGTA            TTTTTTATTTTCCAA  86 23
        napF NONE
        napD 1487109 .. 1487122 +  -8.1  -3.08813   CTAAAAGAGAAAGGC               CCGAC CGCG GTCGG                TATGTTCGGCTCCGG  63 439
        napB 1489710 .. 1489722 +  -9.1  -3.76224   TGGTAATAGCTTCCA                GCCAG CAC CTGGC                TTTGGTCAGTAACCG  78 1
        napC 1490435 .. 1490463 + -12.4  -4.72272   GAGAGTGATGATTAA        CGCCCTGTGGAC TTTGC GTCGGCAGGGCG        TTTTTACTGCAGCAG 100 99
        nudK 1491417 .. 1491436 +  -7.8  -2.74263   GGTTTCGCCAACCAA            ACCGTTGG CGAC CCAACGGG             ATTTGGCACTGGCGT  61 301
ISU55_RS06790 1498175 .. 1498204 +  -4.2  -2.77503   CGATACAGGAAATTA       TCAGCCCCAGAC ATCGGA GTATGGGCCTGG        TCATTGGGTAGTTAT  46 379
ISU55_RS06795 1498756 .. 1498785 +  -7.8   -2.7012   CTATTGAGCAAAAAA       ATGGTCTCCCGC ATTATC GCGGGAAACCAC        TCATCTGGTATGTTC  60 71
ISU55_RS06810 1502982 .. 1502998 +  -9.4   -3.4758   TGCTATTATCACTTG              GGCGCT ACCTC AGCGCC              TTAATATTATTCCTA  76 56
ISU55_RS06815 1504066 .. 1504088 + -13.5  -4.18044   AAATATATCACCGTT           GGCCGGATT GATGA AATCCGGCC           TTTCATTATTTATCA 100 63
ISU55_RS06835 NONE
ISU55_RS06840 1508861 .. 1508874 +  -9.5  -5.85737   TTTTTGACCTTTTTA               CCCGG TTTT CCGGG                TTTTTTTATTGATCT 100 77
ISU55_RS06845 1510296 .. 1510308 +  -7.7  -4.23615   CTTATACACTCAAAT                GGAGT TTT ACTCC                TTTATTGAATGTCAT  76 445
ISU55_RS06850 1512061 .. 1512082 + -12.3  -6.32017   TAAACTGTTTTTCTT           GCCCGGTGCG CGA CG-ACCGGGC           TTTTTTTTATTTGTT 100 73
ISU55_RS06855 NONE
        cysT NONE
        cysW NONE
        cysA 1516231 .. 1516262 +  -8.9  -3.14344   CGCTAACGCGCAAAC     CCCG-ATGAGCTGAC AGGC GTCAG-TCATTCGGG      TTCATGAGAGCGGTG  69 102
        cysM 1517322 .. 1517335 +  -3.9  -3.85864   AATTAGCAGTAAATG               CATTA CTAA TAATG                TTATTATAATAATAA  56 144
ISU55_RS06880 1518701 .. 1518731 +  -5.7  -3.47349   AAATCGATACGTTTC      TACT-AGAATGGAA AAAT TTCTATTCTGAGTA       TTATAAATTTGAGGC  59 46
ISU55_RS06900 NONE
ISU55_RS06905 1525090 .. 1525102 +  -4.9  -2.71712   AAATTCCATCGCTAA                TCATT ATG AATGA                ATTTGAAGCAGCCAG  48 41
ISU55_RS06910 NONE
ISU55_RS06915 NONE
ISU55_RS06920 1527924 .. 1527937 +  -2.3  -2.65264   GGCCATTTTCAAACT               GGAAG TGGC CGTCC                TAATCTGAGTGATAA  40 50
ISU55_RS06925 NONE
ISU55_RS06940 NONE
ISU55_RS06945 1535453 .. 1535470 +  -9.8  -5.60993   TGGCCGGCAGCAAAA             CGGCGC CCTTGA GCGCCG              TTTTTTTGTGCCCAG 100 127
ISU55_RS06950 NONE
ISU55_RS06955 1537528 .. 1537549 +  -5.2  -3.01791   TGACAGTTAAAACAG           TTTGCGGT CTGGCA ACTGCAAA            TGTTCAACAAGAAAT  52 102
ISU55_RS06960 1538118 .. 1538138 + -12.5  -3.76888   AGGCGCATATGAAAA            ACCTCCGGC TAT GCCGGAGGA            TATTTATTATCGGTA 100 105
        zipA 1544416 .. 1544432 + -10.8   -5.5762   TCGAATTAACCCGAA              CCCCCG CATGC CGGGGG              TTTTTTATCTTTGGT 100 76
        ligA NONE
ISU55_RS07000 1546963 .. 1546974 +  -2.2  -5.03945   AATTTGGGTCTCAAT                CAGT TGCT GCTG                 TTTTTGTAATTCTTC  70 285
ISU55_RS07030 NONE
ISU55_RS07035 NONE
ISU55_RS07040 NONE
ISU55_RS07045 NONE
ISU55_RS07050 NONE
ISU55_RS07055 1551710 .. 1551723 +  -5.9   -2.7185   TATAGATACAAAAAA               GGTGC CGTA GCGCC                TCGTTAAGCGATCGT  52 193
ISU55_RS07065 1554670 .. 1554680 +  -6.8  -4.16016   ATTCCATGAAAACCC                 GCCT GAC AGGC                 TTTATTGAGCGATGA  71 82
ISU55_RS07085 1557857 .. 1557869 +  -9.1  -3.01848   CGCCTCAGAAAATCG                GCGTG GTT CACGC                TAAATTTTTTATTTA  68 10
         glk 1559058 .. 1559084 + -10.2  -2.78384   GGGCGCAGAAGAATA         TCTGCCGGGA GGATAAG TTCCGGCAGA         TATGATGCGGAAGAA  75 59
        alaC 1562038 .. 1562050 +  -3.4   -4.2693   GTGCGCTATTATTGC                CATG TTCTT CATG                TTGTTTTCATCGATT  61 213
ISU55_RS07105 1562785 .. 1562798 +  -3.1  -3.60151   CCCAATAAATAAAGG               GC-CTG TTC CAGTGC               TTCTACTTTAGAAGC  49 172
ISU55_RS07115 NONE
ISU55_RS07120 NONE
ISU55_RS07125 1565597 .. 1565610 +  -2.3  -3.98661   AACCCTCCACTCACC               GCGTT ATAA ATCGC                TTTGTCATCAATCTC  53 161
ISU55_RS07155 1572929 .. 1572941 +  -3.5   -3.6944   TGATAAATATTATTG                TTTAA AAA TTAAA                TGTTTATATTCACCC  53 91
ISU55_RS07165 1574598 .. 1574610 +  -6.9  -3.86015   GCTCCGCTCTGGTTA                TGGCG ACG CGCCG                TTTGTCAGGGCAATA  67 60
ISU55_RS07190 1581946 .. 1581977 + -12.5  -2.64616   CTTCCAATACGACCA      CGTCATGCTAAGT CGGGTT ATTTAGCATGACG       TGATATCGCTCAAAA  88 335
        tssH 1595038 .. 1595069 +  -3.8  -3.30418   AAAGGCAATAAAAAA      TAGCTAGTATTGGC ATGA GCGAATATTAACTA       TATATTTAATAAATC  49 151
ISU55_RS07240 1595726 .. 1595762 + -12.3  -3.17622   AGTAAAGCATAACAG    CTTGCTGCCGAGGCG GATAAAA CGCTGCGGTAGCAAG    TCTGTTATAAAGATA  93 93
ISU55_RS07245 NONE
ISU55_RS07250 1598660 .. 1598671 +  -3.6  -4.02022   CACCATTTTCAAACC                GCTG GTGA CGGC                 TTTATAGTCCTTCCA  59 431
ISU55_RS07260 NONE
ISU55_RS07265 1601332 .. 1601351 +  -4.2  -4.51743   ATTTCCATATGATCT            CTCCGTGG CGGT TCAGGGAG             TTTATTTCCTGATGA  66 65
        tssB NONE
        tssC 1603592 .. 1603609 +  -7.1  -2.84955   GCATGGGACCTTTAT             TCATTCA ATAT TGAATGA              TGTAGTAATGGTTGT  59 170
ISU55_RS07280 1604284 .. 1604306 +   -12  -4.72497   CATGTCGCTATCAAA           CTTGCCACCT TTG GGGTGGCAGG           TTTTCTTAATAAGTG 100 51
        tssJ NONE
        tssK 1606448 .. 1606464 +  -9.4  -4.25104   AGTGATTTGAACCTT              GGAGGC TCAAT GCCTCC              TTTTGATAGAAGCAG  88 49
ISU55_RS07300 NONE
ISU55_RS07305 1609194 .. 1609209 +  -3.2  -3.86944   TTCCGGTGCGCGTAT              CCATGC TGTT GTGTGG               TTTCCTCATTGTCGC  53 315
        tssM 1613841 .. 1613853 +  -3.4  -4.28656   AACAGACAATTAAAA                GTGT CATGT ACAC                TTTTCGATATTAACT  61 274
ISU55_RS07320 1616489 .. 1616527 +  -8.8   -3.1458   TTATAGATAAAAGGT   AAGCATGTTCTGCGTGGG AAA CACACGTAGAGCATGCGG   TCTCTGATTTTTCGA  69 43
ISU55_RS07325 NONE
ISU55_RS07330 1617658 .. 1617671 +  -2.3  -2.91383   GAGCTCTACAAGCTA               GGGCT GGAC AGCCA                TCTATAAATACGGAT  42 5
ISU55_RS07335 NONE
ISU55_RS07340 1619088 .. 1619105 +  -3.5  -2.90075   CCCGTTGAGCCACGG             TGAGTAA AGAG TTATTCA              TGTCATTAAGCAGAA  45 33
ISU55_RS07345 1619935 .. 1619951 +  -2.3  -5.38326   GGTTACTGTATTGAT              GTGTA TGCATTT TACAC              TTTTTATTTAATTAA  75 508
ISU55_RS07365 NONE
ISU55_RS07370 1624154 .. 1624170 +  -4.5  -3.31144   CTCTGTCTATGTCCA              TACTATT CCC AATGGTA              TTGTCACGATAAAAA  53 266
        ccmA NONE
        ccmB 1625644 .. 1625659 +    -4  -3.12803   GTGAGCATACAGTAA              TCA-CCC AAT GGGCTGA              TGTTAAGTCTGCCTA  49 26
ISU55_RS07385 1626433 .. 1626449 +  -2.1  -3.12395   TATTACGCAAGGAGC              CGCGCGT ATG ACCCCCG              CTTTTCACTCATGGG  43 15
        ccmD NONE
        ccmE NONE
ISU55_RS07400 NONE
ISU55_RS07405 NONE
ISU55_RS07410 NONE
        ccmI NONE
        mlaA 1632350 .. 1632377 + -17.2  -3.07113   CCGCCGTATTCAAAA        TAGAAAAGCGCC ATCA GGCGCTTTTCTA         TTGGATAAGGTGATG 100 77
ISU55_RS07430 1634417 .. 1634437 + -12.6  -3.90425   TACATACCTGACCAA            CGCGAAGC CTTTT GCTTCGCG            TTATTACTTTAGATG 100 62
        fadI NONE
        fadJ 1638407 .. 1638424 +  -4.8  -3.64822   TTCGGTGATGATTAT             TTGCCC GATTTA GGGCGA              TTTACGTAACGCAAT  57 131
        sixA 1639430 .. 1639449 +   -15   -3.8579   ATCAACGTCTAACTG            GCGCGGCA TTCT TGCCGCGC             TTTCGCTTATTGGCT 100 94
ISU55_RS07450 1639844 .. 1639857 +  -2.4  -3.34013   GGGTGTTGTGCCATC               CAGA GCGGCG TCTG                TTGCTTCAAAACATG  46 279
        prmB 1641572 .. 1641587 +    -4  -3.81447   ATTTCAGCATGTACC              GTGATT AATT GATCAC               TTCTTATCAAGTCTG  57 18
        aroC NONE
        mepA NONE
ISU55_RS07475 1644430 .. 1644458 + -10.3  -3.66883   AATTTAGGCACCCAC        CACCGCTAAATAC GGT GACTTTAGCGGTG        TTTACCCTCTCTTAC  82 71
ISU55_RS07480 NONE
ISU55_RS07485 1645630 .. 1645640 +  -3.2  -4.16943   ACGGTTAGGATTCAA                 TGCT GCC AGCG                 TTTTGGCATCTAACG  59 293
        fabB 1649239 .. 1649258 + -12.2  -5.24003   TGTCAGCAGTCTGAA            GCCTACGA GAGA TCGTAGGC             TTTTTACTTTTTATT 100 260
ISU55_RS07505 1651462 .. 1651485 +  -8.2  -5.40625   AATTGCTTAAAAAAA          GCATGTGGAA GATA TTCTGCATGC           TTTTTTATATGCTGT 100 62
ISU55_RS07520 1655004 .. 1655022 +  -7.4  -3.01261   TCCGGCGGGGCAATA             GTGGCTTA TAC TAAGCCCC             CTGTTTTTCATCTGT  61 12
        pdxB 1656233 .. 1656251 + -12.4  -3.38072   TAAAAATTAATAACA             GGGCGGTG TGT TACCGCCC             TTGCTGTTCAATAAC  95 67
ISU55_RS07530 NONE
        truA NONE
ISU55_RS07540 1659181 .. 1659217 +  -2.2   -5.4505   CAATCCAAGTTTCGG   TGCCTTAGCCACGTCGC ACTG GCG-TGTATCTCAGGCA    TTTTTTATTGGAGAG  78 135
        accD 1660226 .. 1660254 + -10.4  -2.90804   GTCTGATTAACTCAA       CGGGCATCACTCT TGTA AGA-TGGTGCCCG        GTTATTGTGCCTTAT  76 35
        folC NONE
        dedD 1662786 .. 1662799 +  -3.1  -4.68456   GGTAATTGTGTTTTT               CCATG CGGT TATGG                TTGTTTTTTAGTCGT  65 200
        cvpA 1663412 .. 1663425 +  -2.3  -2.57132   TTACCGAATCAATTA               CCGAT TCGA AGCGG                CTTATGAGGAAAAGA  40 5
        purF 1665040 .. 1665069 +  -7.2  -5.15167   AGAATGAGCCAAAAA      GGTGCAACCTGCGT TTAG GCGC-GGT-GCACC       TTTTTATTCATGGTG  90 103
ISU55_RS07570 1665945 .. 1665974 +  -7.1  -5.18995   TATGCTCCACAATGA       TCCTGCAACAGCG ATGG TGCTGTAGTAGGG        TTTTTGTATTCTGTT  90 189
        hisJ NONE
        hisQ NONE
ISU55_RS07585 1668603 .. 1668620 +  -4.1  -3.04144   TAGTGCGGAGAACTT             TATGACG AATA CGTCCTA              TATTAAAAATGCGGA  47 38
        hisP 1669716 .. 1669730 +  -5.6  -2.59035   GGCGATCCAAAACAT               CGGCCA GCG TCGCCG               TAAATTGCTCATTGT  47 340
ISU55_RS07600 1671510 .. 1671548 +  -3.7   -4.0896   GCGCCTTGATAGGCT   GTATCGCGCGGGTATTC GTCTG GGCTGTCAGCGCGATCC   TTTTCGACAAAATTT  60 56
        yfcE NONE
        yfcD 1673048 .. 1673072 +  -5.7  -5.56673   TGCTCAATAAAAAAA          CCAAAGCCC CGCTAAA GCGCTTTGG          TTTTTTATTATCAGT  90 49
ISU55_RS07620 1675772 .. 1675784 +  -3.3  -4.33819   TTACACAGAATTATG                GACAG GCT CTGGC                TTTCTTATCGATCAT  61 52
ISU55_RS07635 1678097 .. 1678116 + -10.7  -3.58343   CTGATGTAACAAAAA            CGCCAGC GCAGAG GCTGGCG             TTTCAGACTGCTGAC  84 88
ISU55_RS07650 NONE
ISU55_RS07655 NONE
ISU55_RS07660 1684387 .. 1684403 +  -9.4  -5.42131   ATAAGCCAATAGTAG              GGTGCC TCGAC GGCACC              TTTTTTGTATCGTTA 100 89
ISU55_RS07665 1686580 .. 1686590 +  -6.8  -4.15222   ATGTTCATGCGATGA                 CTGC TGA GCAG                 TTTCTTGCCGAAAAT  71 158
        lrhA 1691032 .. 1691053 + -10.3  -2.57211   ATTAATGTGTAGTTA           CTTTTGTCA AAGT TGACAAAAG            GTTATCGAAAGGAGT  74 521
ISU55_RS07685 1691716 .. 1691729 +  -3.1  -2.73681   ACGAATCCCGATAAG               CTGAT ATCA GTCAG                TGATTCGGGTCAGTG  43 27
ISU55_RS07690 NONE
        nuoC NONE
        nuoE NONE
        nuoF 1696429 .. 1696444 +  -4.6  -2.90813   AATTTTTGATTAACG              CCTGCC GTAA GGTGGG               TCATTTGGAAGCATG  50 76
        nuoG NONE
        nuoH NONE
        nuoI NONE
        nuoJ NONE
        nuoK NONE
        nuoL 1703441 .. 1703452 +  -5.8  -2.84098   GCTTTTCGTGTAGAT                GCCT GAAT AGGC                 TCATTAATTAGGGAC  53 28
        nuoM NONE
        nuoN 1706527 .. 1706554 + -14.2  -5.23292   TCGAGATAGACCCTA        CCCCCTGTGAGT ATCG GCTTACAGGGGG         TTTTGTTTTATCTGG 100 72
ISU55_RS07750 1708143 .. 1708156 +  -2.3  -4.32951   ATGGCTCCCTTGGAA               CTCTC GGTT GAGCG                TTTATTCGTTCAAGT  58 262
        idnO NONE
ISU55_RS07765 1710246 .. 1710272 + -10.1  -3.82218   CATCCATGTAGGCTC        GAG-CCGCGCCA TCCT TGGCGCGGACGC         TTTACTCCTCTGCCT  84 438
ISU55_RS07785 1713865 .. 1713882 +  -2.7  -5.44721   TAATGATAAACTGGT             CACGTTA CCGG TAACATG              TTTTTTTAACATGGT  80 255
ISU55_RS07790 1715244 .. 1715257 +  -5.3  -4.50058   TGTCAATAACCTCAA               TCACT CTTT AGTGA                TTTTAGTTATCCATG  70 218
ISU55_RS07795 1716928 .. 1716946 +  -3.8  -2.71712   AGCCGATGCCATTTA             TCACCGGA GAA TCTGATGA             ATTTACAGCAACAAC  44 40
ISU55_RS07800 NONE
ISU55_RS07805 1719335 .. 1719351 +  -4.5  -3.25538   CGTGTTGTATTCGTT              TCTAAAT GCT ATTTAGG              TAGTTTTATTCAGAG  53 21
ISU55_RS07810 1720602 .. 1720619 +  -8.4  -3.27406   TTACGTTGTGGTTAC             TGGCCC TTAAGT GGGCCA              CTTTTATCGTAAGCA  69 54
ISU55_RS07815 1722108 .. 1722124 +  -3.7  -3.18582   GGGTAAGACGACAGC              CAGGT GCGCTCA ACCTG              TTACTCACTGAGCTA  48 361
        menF 1723868 .. 1723881 +  -2.3  -4.07687   TATCACGGCCGTAGC               GTCTG TTAA CTGAC                TTTTGAGCAAACCAT  55 226
        menD NONE
        menH NONE
        menB NONE
        menC NONE
        menE NONE
        ybiB 1730899 .. 1730921 +  -9.1  -4.78848   TTGTCAGCAGTCTGA           GCCCATCAG ATGAA CGGATGGGC           TTTTGTATTTCCAAG 100 241
        rlmF 1732863 .. 1732884 +  -3.9  -3.24771   GCGTTAATTTGTTTT           TTTATAAAG ATAT TTTTATAAA            TCATTATTTTTATTT  49 265
ISU55_RS07880 1736776 .. 1736804 + -13.2  -3.05997   ATAGCCTATAAAAAA        CTGGCGGGTATC AGTAA GATGTCCGCCAG        TGTGATTTCTAGCCA  95 158
        ompX 1745002 .. 1745017 +    -9  -5.82316   TGTGTCTGATAAAAG              TCCGCT TTCG AGCGGA               TTTTTTTTGCCTGCT 100 86
ISU55_RS07930 1746236 .. 1746259 +   -11  -4.81083   CCGTGCTTTTATCTT          CCCCCAGC CGTGATTT GCTGGGGG           TTTTTAATGGTTACC 100 66
ISU55_RS07935 1747019 .. 1747043 +  -2.2   -2.5121   ATAACTAGACTTTAT          CTTTAACATA TACAC TATGTTGACG          GGTTATTTCTTTCGT  39 69
ISU55_RS07940 1748047 .. 1748057 +  -6.8  -4.98672   TTTTTTATTTCTCAC                 CGTC ACC GACG                 TTTTGTCTTTTTGAA  86 233
ISU55_RS07945 1749708 .. 1749718 +  -5.4  -3.35001   TTTATCTTACTCAAA                 GGTA AAG TACC                 GTTTTATATCATGTG  55 85
ISU55_RS07950 1750743 .. 1750786 +  -4.7  -3.12069   TTTTAGCTGGTAAGC GTGTCA--ATTCTCGCTCTGC TCAG GCAGAGCGATAACCATGACGC CTTTATTAGAGTTAA  51 28
ISU55_RS07955 NONE
ISU55_RS07960 1753364 .. 1753374 +  -6.8  -3.73042   ACGGCGGGTTGAACA                 TGGG TGC CCCA                 TATTTTCGTAGGCCG  65 130
ISU55_RS07975 1757004 .. 1757038 +   -10  -3.45031   CTGCGTTGGCGGGTT     TGGGTATGCGTCCGTT TTA ATCGGACGAATGCCTA     TTAACTTTTTGAGAA  78 257
ISU55_RS07985 1759079 .. 1759091 +  -5.5  -3.09491   TTCTATGTCGTTGTA                TGCCG TGT CGGTA                TTCCCTAAATGTATG  53 69
ISU55_RS07995 1761740 .. 1761751 +    -3  -3.74902   ACATTTTCTCAGAGT                GAAT AAAT ATTC                 TGTTTTCATCAATCT  53 498
ISU55_RS08000 1764058 .. 1764073 +    -6  -3.61371   GTCAATATCCAGGCC              CCCAGC AGCG GCGGGG               TTTCACGTAACGTTT  61 475
ISU55_RS08010 1771939 .. 1771968 +    -7  -3.05844   TGTTGAGAATAACTT       GCTGGCGGTGCC AATACC GGTTCCGCCACC        TGTTGCAGTACCGAA  58 94
ISU55_RS08015 NONE
ISU55_RS08020 1772856 .. 1772888 + -12.1  -3.58726   ATCCTAAACCTTGAA      TAATTATCCCCCGAC TAT GCCGGAGGATAATTA      TTGTCTATAGAAAAC  93 27
ISU55_RS08030 1775290 .. 1775311 +  -8.7  -3.35371   CCCGTGATGAAGCAA           G-CCCGGCCA ATT TGGCTGGGGC           TTGCTTCAAACTCTA  71 45
ISU55_RS08040 NONE
ISU55_RS08045 1776978 .. 1776993 +  -3.4  -3.05963   CATCATAATTGCCAT              TAAATA AGCC TATTTA               TCTTGGACTACAAAT  44 265
ISU55_RS08050 1777557 .. 1777574 +  -2.7  -3.21099   TCAACCTGATAATGA             CTGTATT CCCT AATCCAG              TTGATGATCCCACCG  44 41
ISU55_RS08070 1783002 .. 1783019 +  -4.9  -2.80098   AAGATTTTAAAACGC             TAGGATT TTAA AGTCCTA              ATATTTTGGAATCCT  49 39
ISU55_RS08075 NONE
ISU55_RS08080 1784895 .. 1784916 +  -5.8  -2.58491   TTTGATACTCGAAAA           CGCGGTGA AATGAC TCACCACG            ATATTGCTATTTATA  52 123
ISU55_RS08085 1785985 .. 1785996 +  -5.8  -2.71731   GCTCAACTGTGGCAG                CACC TGTC GGTG                 TAATTACGGGATAAA  52 11
ISU55_RS08090 1787029 .. 1787043 +  -2.8  -4.11304   TAATATCAATTAGAT               TGGG TGGAGTT CCCA               TTATTTATCGATTGG  57 90
ISU55_RS08095 NONE
ISU55_RS08100 1789545 .. 1789580 +   -12  -3.14132   TGTAAATAGTAGCCC    CGGTGCTCTGAATTAT TTTT ATATTTCAGAGCACCA     TTAGTACACCAGCCA  86 55
       cas1f NONE
       cas3f 1796637 .. 1796651 +  -5.7   -3.5121   TTGATTATTTCTGAG               CTGTC TGTAC GACAG               TGTTGTTATCATAAT  59 91
        csy1 NONE
        csy2 NONE
        csy3 NONE
       cas6f 1800867 .. 1800908 +  -9.7  -2.71731   TGGTTTTGATTCTTT TTGGCCAGTGTTAACGTA TTGATTT TATGTTG-CACTGGCCAA TAGTTAAAGAATCAC  71 32
ISU55_RS08155 1804280 .. 1804292 +  -3.4  -3.51124   TCTGGGTTGTGGTTT                TTGC GCCAG GCAA                TATTTCATCGTTGGT  49 95
ISU55_RS08160 1805637 .. 1805654 +  -4.2  -5.52909   TGTCAATAATTTGAA             TGTGAT GCAGTG ATCACA              TTTTTTTACATCTTG  85 411
ISU55_RS08165 1806875 .. 1806886 +  -2.2  -3.10908   AAGGAGCAAAAGGCC                CCGT AATC ATGG                 TTGGATACTGCATTT  42 425
ISU55_RS08175 1808362 .. 1808377 +    -9  -3.08934   GTGAGAAAAATCACG              GCACAG CGTA CTGTGC               TGTTCACGTATCTAC  69 167
ISU55_RS08180 NONE
ISU55_RS08185 1810409 .. 1810439 +  -4.6  -4.20118   AATTAGGCTTTAGTT       GACGTTGTCGGTTA CTT TATCCGCTGGCGTC       TCTTTTTTCCGTCTT  63 96
ISU55_RS08190 1811944 .. 1811954 +    -4  -3.90744   TCGCGTTCAACCAGA                 GAAT ACA ATTC                 TTATTTAACAACACA  57 424
ISU55_RS08210 1815772 .. 1815817 +   -15  -4.62957   CACTTTCTCTGGCGG TTGACATGGCCTGAGTTCGGT ACTGC ACCGGACTCAGGCCGT-TTAA TTTTACTTTGATTCT 100 115
        pyrC 1817781 .. 1817836 +  -5.6  -2.59742   TTTTATATCAGTCTC TTGTCGCCTGAATGTTTATACTGTAT AAAT AAACAGTATGAATATTCGGAGGACCA ATTATGCGCGTTGAA  52 279
        dinI 1818338 .. 1818360 +  -5.4  -5.26875   ACCACAATACCATTT           TGCCGGGGAG TCG CTCCTCAGCC           TTTTTTGCTTAAAAC  84 278
        bssS 1819234 .. 1819245 +  -3.6  -4.02022   CACCATTTTCAAACC                GCTG GTGA CGGC                 TTTATAGTCCTTCCA  59 372
        rluC 1825387 .. 1825409 + -10.5  -5.09204   GATGATCATAAAAGG           CGGGGGGCA CAGCA TGCGCCCCG           TTTTTATTCGACTGT 100 71
        yceD NONE
        rpmF 1826927 .. 1826944 +    -2  -3.49475   ACTTGCTAATCTTTA             G-CAAGG CGATA CCTTGGC             TTGTCTGACCCTAGC  47 46
        plsX NONE
ISU55_RS08275 NONE
        fabD NONE
        fabG 1830764 .. 1830777 +  -2.3  -4.25848   TACACTACGAAAACC               ATCGC GAAA GCGAG                TTTTGATAGGAAATT  58 143
        acpP 1831061 .. 1831086 + -11.9  -5.93809   CTTTAAGTTTAGATA         GTTAGGCGGTC ATTC GACCGCCTAAG          TTTTTTTTGTCCGAA 100 50
        fabF 1832403 .. 1832421 +  -9.5  -4.77165   TTCTGATGCTAAAAA             GGCCCGG TTTTT CCGGGTC             TTTTATTGTGCCCAG 100 56
ISU55_RS08300 1833108 .. 1833132 +  -9.9  -4.50761   ATAGGCGCATATGAA          AAACCTCCGGC TAT GCCGGAGGATA          TTTATTTAAATTCAT 100 103
        pabC 1834396 .. 1834422 + -10.1   -3.8381   CATCCATGTAGGCTC        GAG-CCGCGCCA TCCT TGGCGCGGACGC         TTTACTCCTCTGTCT  84 169
        mltG NONE
ISU55_RS08315 NONE
        holB NONE
ISU55_RS08325 1838173 .. 1838199 +  -7.3  -4.15044   GTTTCTTTACGTAAA         GTACGAAATCC GAGAG GGATTACGTGC         TTTCTTGAAAGAAAC  73 127
        ptsG 1839833 .. 1839850 + -12.7  -4.30719   TAGGGGAGAGCAAAA             GGGAGGC GAAA GCCTCCC              TTTATTGTGCCCAGA 100 48
ISU55_RS08335 1840532 .. 1840564 + -11.3  -4.42806   CCTTATAGGCGCATA      TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA      TTTATTTCAAACTAA 100 99
ISU55_RS08340 1841700 .. 1841718 +  -3.8  -2.91395   TGTTTGAACAAGCCG             CAGCTTAT GCA AGAGGCTG             ATTTATAAGCGCAGT  46 6
        hinT NONE
ISU55_RS08350 NONE
        lpoB NONE
        thiK 1844152 .. 1844175 +  -2.3  -3.39803   CTGCGGCACCAAGCC          CGCCGCTTC AAGCAC GAAGGGTCG           TTATCAATCTGAATA  45 44
        nagZ 1845288 .. 1845309 +    -5  -3.76224   TCATAAGGGCCAAGA           GCTCCCTC TTTTCT GTGGGGGC            TTTGATCAGTAACGC  59 78
ISU55_RS08370 1846220 .. 1846231 +    -3  -4.63993   TAGCGAACCCTATGT                TATC TAAG GATA                 TTATTTTTTACCCTT  65 340
ISU55_RS08375 1847739 .. 1847753 +    -5  -3.93583   TAAATGCTGTTCAAA               TTGGTT TCT AACCGA               TTTGTCGCTGACTTG  61 180
ISU55_RS08380 NONE
ISU55_RS08385 NONE
ISU55_RS08390 1850528 .. 1850542 +  -3.5  -4.34263   CTTACACCTGCTCTT               GGGGT ATTTG ACTCC               TTTGTCTTATTGCCA  63 137
ISU55_RS08395 1851750 .. 1851762 +  -9.1  -2.77192   TCAATACGTTTGATA                CCCAG TTT CTGGG                CTTGTTGACGCAATT  62 490
        lolC NONE
        lolD 1857136 .. 1857160 +  -2.7  -3.86995   GCTGGTGGGGGCCGA          GTGATGGGGGT TTC GCCACTTTCAC          TTCTTATCGGTTTAC  52 22
        lolE NONE
        nagK NONE
ISU55_RS08425 NONE
        cobB 1860213 .. 1860227 +  -6.4   -2.7386   GGGATTGATTTCCCC               GTTGGG TGC CTCAAC               TCATTCAGATAACTT  55 33
        pepT 1861790 .. 1861806 + -10.8  -3.72051   AACGATAGAGAGAAA              CGCCCC GAAAA GGGGCG              TTTGAGGTTATTGAC  84 45
         icd 1872239 .. 1872280 + -14.7     -3.54   GTAGTTCTGACGTAT CTATAAACTTCACGAGGGC TTAT GCTTTCGTGAAGTTTATAC  TATTTATGGCGTGCT 100 37
ISU55_RS08510 1877958 .. 1877978 +  -7.5  -3.07254   ATGGAACAACGGCAG            CAGCGGTCA GTA TGACCGTCG            TGATTTATCGTCTTT  62 11
ISU55_RS08515 1878187 .. 1878206 +  -6.4  -3.60685   TCTGCATTTATTTAT            CCGC-AGCC AGA GGTTAGCGG            TCCTTTTTTTTACCA  63 9
ISU55_RS08520 1880032 .. 1880054 +  -4.8  -4.28548   CGGCAGGAAAGCGTA           CTGCGGTT AATCGGA AACCGCTG           TTTTAATCGGTGGCT  66 228
ISU55_RS08540 1882664 .. 1882682 +  -2.4   -4.1299   AGGGACGGCGTGGTT             TTCAGATC ATT GAGTTGAA             TTGGTTTTTTTTGCA  57 8
        cspE 1890775 .. 1890788 +  -9.5  -5.25893   CTGATTATAAAAAAA               CCCGC TAAG GCGGG                TTTTTTACTGTCTGT 100 52
        dsrB 1891205 .. 1891234 +    -8   -5.2197   TATTGCGATAAAAAA      CCGGAGG--AAGGT TCAT ACCTTATCCTCCGG       TTTTTGCTTTTTATC  95 76
ISU55_RS08585 1894955 .. 1894978 +  -2.6   -3.0127   AAAACGACAAGTTAA          TTAAATAATG GATT TATTATTTAG           TGTCTCATTAAGTCA  43 85
        mgtA 1898033 .. 1898065 + -14.3  -3.18571   TGGTTGATCTCAAGA      CACTATTCCGGGG GTGGCTG CCCTGGAATAGTG      TGTGTATTTAAAAGA 100 63
        flhC 1900223 .. 1900236 +  -3.8  -4.19624   GGTAGGTTACAGCAG               CGGT ATAGCG ACCG                TTTCTGTTGACCGTC  60 129
        motA NONE
        motB NONE
        cheA 1904680 .. 1904690 +  -5.4  -3.28924   ACCGCATAGCGCACA                 GGAA TTT TTCC                 TTATAAAAACAGGTA  55 32
        cheW 1905557 .. 1905587 +  -9.6  -3.87075   CTGAAATAAAGAACT       GAACCGCCATTGCA TAT TGCTCGGGCGGTTC       TTTATGACAAGTCAT  81 249
ISU55_RS08640 1909246 .. 1909258 +  -3.5  -4.00445   TTAAACTGACACGAT                TAATT AAC AATTA                TTGTTCTTGGTGATG  58 183
        yapJ 1913735 .. 1913748 +  -5.3   -4.4009   ATTTAACCCATTGGT               GTTAG CTGG CTAAC                TTTTCTACACTGCCG  68 391
ISU55_RS08650 1916766 .. 1916778 +  -3.3  -3.11024   ACGTGGTACAAAGCG                GGCAA TAA TCGCC                ATTTGTCTTACCGGA  46 18
ISU55_RS08655 NONE
ISU55_RS08660 NONE
ISU55_RS08665 NONE
        cheR NONE
ISU55_RS08675 1923381 .. 1923396 +  -5.4  -2.52602   TCTATAAATTATTTT              TCCGAT AACC ATCGGG               CTATTGCATTTAATC  49 61
        cheY NONE
        cheZ 1924511 .. 1924534 + -14.6  -4.58297   TATCGATAGCGCTAA          CCGGTAGGGA ATTG TCCCTGCCGG           TTTATATTTTTCATA 100 47
ISU55_RS08690 1925919 .. 1925938 +  -8.6  -2.66395   ATTTAATGAATTCTG            CATGCCTA TTTA TAGGCGTG             GTTGTACTGCTGCCT  63 120
ISU55_RS08695 NONE
ISU55_RS08700 1928851 .. 1928878 + -14.2  -2.76171   TTTAATAATCATTAA        CGGGTTGTGCGA TTTT TTGCACAGCCCG         ATTCTACTTCTTAGG  95 64
ISU55_RS08705 1930024 .. 1930047 +  -2.4  -3.67597   TAGTGCGGATACTGA          GAGCGTTC GAGCATGG GAACTCTC           TTGTTGGGTCGCCGG  49 184
ISU55_RS08720 1933262 .. 1933288 +  -7.2   -3.9749   CATCCCTGGGGGCTC        GAG-CCGCGCC CTCCCT GGCGCGGACGC         TTTACTCTTCTGCCT  72 165
ISU55_RS08725 NONE
ISU55_RS08730 1935196 .. 1935234 +    -4  -4.03909   TAATCTGCCTACCAT  TTCACTACGCCAAGCATG CCAGC CATGCC--GCGTGGTGAA  TGTTTTTACTCTATC  59 62
ISU55_RS08745 1938510 .. 1938549 +  -3.6  -4.26903   ATGTTGCTTGTATAA  CAGC-GTATCCTTGCCATC CAA GATAGCAGGAATACTGGTG  TTTTCATCCCATCCA  61 192
ISU55_RS08795 1950267 .. 1950286 + -12.2   -3.1552   GTGGCAATTGCTGAT            GGCGTCAT TATA ATGACGCC             TGTTCATGCCTGCGC  86 53
        proQ NONE
         prc 1953162 .. 1953183 +  -8.7  -6.31682   AAATAATATGAAGAA           TCCGGGTCT TATT GGACTCGGA            TTTTTTTTTGCTTTT 100 47
        htpX 1954573 .. 1954601 + -13.2  -5.44119   ATAATATGGTCTTCA        CACCCTGTGAGC GGTAA GCTGACAGGGTG        TTTTTTTACCGTGGC 100 103
ISU55_RS08815 1955797 .. 1955817 +  -6.8    -2.981   CCAATCCGGCATAAA            ATGGGAGC TTAGT GCTCCCAG            CTTTATAAGTTCGAC  58 127
ISU55_RS08820 1956640 .. 1956661 +  -7.5  -5.15117   TAAAACTATAAAAAA           TACAAATTA AGGG TAATTTGTA            TTTTTTGCACTTTTA  90 38
ISU55_RS08825 NONE
ISU55_RS08830 NONE
ISU55_RS08835 1961413 .. 1961424 +  -3.6  -2.60194   AGCCAGTATCAAGGA                GGCG TGGG TGCC                 GTTGGTTGAGAACAT  43 157
         ogl 1964208 .. 1964234 + -12.4  -3.88498   TAGCCGAGTTTTCCA         TTAGCCTCTCTC TTA GAAAGAGGCTAA         TTTGCTGTCTGCAAG 100 38
        kdgR 1965286 .. 1965306 +    -9   -4.7373   CTCTTTTTATAAAAA            CAGCTCCT CTGGC AGGGGCTG            TTTTTCATCACATGA 100 138
ISU55_RS08855 1966440 .. 1966452 +  -3.3  -3.50869   CCTTAGCACTTGAGG                CTGCC GGG GGGAG                TTGTGTCCACTCATC  49 28
ISU55_RS08910 NONE
ISU55_RS08915 1980269 .. 1980296 + -14.2  -3.09784   CTCTAAAATATATTC        GGCGGCT-GAGTC ACT GACTCTGGCCGCC        CTTTATTACCGCTGA 100 84
ISU55_RS08925 1982119 .. 1982135 +  -4.3  -3.85237   ACATCAAAGCCAACA              CCACTGC GAT GCGCTGG              CTTTTTTCATTTATT  57 53
ISU55_RS08960 1987912 .. 1987954 +  -6.3  -4.13183   AGAGTAATGCTAAAA CGCTAACCGATGTAGC-CTA TGGA TGGTGTAGCATCGGCTAGCG TTTACTTTAAATTTT  69 34
ISU55_RS08970 1989648 .. 1989666 +  -4.5  -3.25481   AATTTTGCTAACTGA             TAGCCCT TAATT AGGGCGA             TGTTATAGCGTCTTT  53 395
        thrS NONE
        infC 1993139 .. 1993168 +  -5.2  -3.06492   GGCATTCAAGTAGCA      GGTTTC-T-CTACG CTTG CGTAGTAAGAAACC       TGTTCGCCTAGCTAG  52 41
        rpmI NONE
        rplT 1993824 .. 1993842 + -10.3  -4.49756   TAAGTCAGAATTGAA             GAGGGAG CTTGT CTCCCTC             TTTTAATCTTTGCAC 100 38
        pheM 1994001 .. 1994018 +  -8.4  -6.04324   AAAAATAGCGCCGAA             GCCTCC CATCGT GGAGGC              TTTTTTGTTTTTTAC 100 48
        pheS NONE
        pheT NONE
        ihfA 1998014 .. 1998029 + -11.8  -5.45802   GTTTCCGACATAAAA              GGCCGC GCAA GCGGCC               TTTTTCTTTTCAAGA 100 44
ISU55_RS09020 1998804 .. 1998848 +  -8.7  -3.63515   CGAGCATAACAAACA GTTGCTAACTTTACTTGTTTG CTA TGACCAAGCAGAGTTAGCGAC TTATTAGCAATAAAG  75 42
        btuC 2000043 .. 2000056 +  -4.5  -3.22995   TTCTTATAAATGCCG               CGGTG ATTT TACCG                GTTTATTATCATTAC  51 47
ISU55_RS09030 NONE
        btuD 2001487 .. 2001502 +    -4  -4.35042   CTATTCTCATCAGAT              CATTGT GCTT ACGATG               TTATTTTATCGTGGA  63 84
        arnB NONE
        arnC NONE
        arnA NONE
ISU55_RS09055 NONE
        arnT NONE
        arnE NONE
        arnF NONE
ISU55_RS09080 2009915 .. 2009925 +  -2.4  -2.82584   GAAACGAGTTTACTG                 GCAG GCA CGGC                 GTATTTGATTTTCTC  41 7
ISU55_RS09085 2011515 .. 2011536 +  -2.3  -4.62069   GGATGGCCGGGCTGT           CTTGCGT-TC TGT GATACGTGAG           TTTTTGGCCTCCGAA  63 466
        ppsA 2017586 .. 2017605 +   -10  -5.47399   TATAGGTATTCATCA            TCCGCAGC TTAG GTTGCGGA             TTTTTTTGCAATTAA 100 108
ISU55_RS09120 NONE
ISU55_RS09125 2023410 .. 2023428 +  -5.3  -5.03314   TAACGATCGCCGTAT            TGACG-CG CTAA CGTCGTCA             TTTTTTGCCAATAGC  78 15
        sufA NONE
        sufB 2025900 .. 2025911 +  -2.2   -2.8082   CATTAGTTTGGAGCA                CAGT GTCG GCTG                 ATTGTTAGCTGAGTA  41 13
        sufC NONE
        sufD NONE
        sufS 2029394 .. 2029418 +  -6.4  -5.43553   ACAGGCAACACCAAA          GCCGACTATT CTTTC AGCAGTCGGC          TTTTATTTTTTACGT  91 58
        sufE 2029902 .. 2029914 +  -3.3  -4.78149   TTGCTCTTTAATTAT                TGGGC TCT GACCA                TTTTTGCGTTGTGAG  68 55
ISU55_RS09160 2031215 .. 2031257 + -15.1  -2.79452   ATAACTAATCACTTG TCTGTGCTTTACCGTGGTGG AGAT CCATCGTGGTAAAGC-CAGA ATTGTATTCCGCGCT 100 33
ISU55_RS09215 2039531 .. 2039554 +  -9.6  -2.70275   ACCTACAAAAAATAA          GACAGGGG TTTTTATC CCCCTGTC           TCCTATCTGAGGTTA  68 40
ISU55_RS09230 2044008 .. 2044025 +  -6.9   -4.9725   ATCGCCGCCACAGAA             CACCGCC GTTG GGCGATG              TTTTTGTGTCAGAAT  86 411
        ynhF 2045188 .. 2045210 + -16.4  -4.28188   GGTGAATGGTAATAA           TAAGGGCGGT TAA ACCGCCCTTA           TTTATGTTATCGATG 100 54
ISU55_RS09255 2048056 .. 2048067 +    -3  -3.58329   GGCGCGGTTCGAGCC                TACA TGGA TGTA                 TTTACGGCGTCTTTA  51 221
ISU55_RS09260 2048129 .. 2048146 +  -8.4  -5.26875   TTGTCAATAACCTCA             GGTGGC GTAATG GCCACC              TTTTTTAATTACAAG 100 0
        rovA 2053861 .. 2053883 + -15.6  -4.90906   AGTACAAAAAACAAA           CCGGGGTTCG CAA TGAACCCCGG           TTTTTACTGTTCTGA 100 91
        anmK 2056084 .. 2056106 +    -7  -3.09516   TGGTGACGGTGATAA           GCTACCTTAG ATC TTACGGTAGC           TTACCTAATCACACA  59 35
ISU55_RS09305 NONE
        pdxH 2057293 .. 2057308 +  -4.6  -3.85909   TTGAAAATATATGCG              CGCCGC TTGT GTGGTG               TTTCCGTTTAGCTAA  59 128
        tyrS 2058660 .. 2058681 +  -5.1  -5.52384   AAGCGTAAAATAAGA           GAAGGGGCA GAAA TGTCCCTTA            TTTTTTTGCTGAGAC  87 39
        pdxY 2059673 .. 2059703 + -15.6  -3.51694   GTAATCTAACCATTT       TCAATTGCCCCC TAGTGAT GGGGGCAATTGA       TTGATTCTCATTATT 100 37
ISU55_RS09375 2072231 .. 2072249 + -12.4  -2.95598   GGCGCATATGAAAAA             CCTCCGGC TAT GTCGGAGG             ATATTTATTTTACCC  93 106
        pspA NONE
        pspB NONE
        pspC 2075033 .. 2075053 +  -3.2  -4.74917   ACCGTTAGGCGGGCC            TGCCATCA GGTAA TGCTGGCG            TTTTCTCTGTTTAAT  68 57
        pspD NONE
ISU55_RS09405 NONE
ISU55_RS09410 2078034 .. 2078049 +  -2.6  -3.09987   TGTCACTGATTTCAA              TTTGGA ATAA TTCAAA               TTCGCTGAGTGTTGA  42 295
        tyrR 2080701 .. 2080719 +   -16   -4.8048   AGAGTAAATAAATAT             CCTCCGGC ATA GCCGGAGG             TTTTTCATATGCGCC 100 73
ISU55_RS09435 NONE
ISU55_RS09440 2083193 .. 2083203 +  -2.4  -4.29396   AGTTCCATCGGGTGT                 GCGC TAA GCTC                 TTTTCATCCCTCATT  60 405
        ycjG 2085341 .. 2085367 +    -8  -3.05384   TTGCTCTGCCAACCG         GGTACCTAATGC CGA GCATTGGGGATC         TTCAATGCAGGCCAA  62 256
ISU55_RS09465 2087949 .. 2087975 +   -16  -2.57496   TTTTTAACTAATTAA         CAGAGGCGGATT TTA AATCCGCCTTTG         CATTTATTCTTGTCC 100 58
        zntB 2089340 .. 2089363 +   -14  -5.60993   ATTTAATTGTTACGG          TGCCGATGTT GAAA AACATCGGCA           TTTTTTTGTGCGCCG 100 223
ISU55_RS09495 2097636 .. 2097648 +  -7.7  -3.10641   TTACCGTCTTTTTGG                GTGAC AAC GTCAC                TTCCATCGTCAATTC  59 159
ISU55_RS09505 2099080 .. 2099096 +  -2.1  -4.43309   CTCGCCAGCCCCTTA              GCCGTCA ATA TGCCGTC              TTTTAATTCACCTTG  60 258
ISU55_RS09520 NONE
ISU55_RS09525 NONE
ISU55_RS09530 2104359 .. 2104369 +  -6.8  -3.16055   TCCTGATATTCATAC                 GGCA GAG TGCC                 TTGGTGCCAACTTTC  56 431
ISU55_RS09540 2106769 .. 2106808 +  -3.6  -3.35813   TCATCACATGGCTTT  CGGGTAAAATGAGGGT AATACGAG GCCATCTTTTTACTCG   TTCATTAGGGTGACC  49 65
        hrpA 2111775 .. 2111815 +  -8.4  -5.48514   GTCTGATTGATGCCC CTATTCGACGCCTGAG-CT ATCT AGACTTAGGCGTCGAATTC  TTTTTATTTCTTAGT 100 35
ISU55_RS09555 NONE
ISU55_RS09560 2113145 .. 2113193 +  -5.4  -4.34223   TTTTGTCAGTTCATT TGCAGTACCT-T-CCCATAAAGGC AAT GGCTTGATGGGGATAGGCGCTGCA TTTGTTAATTGGATT  69 417
ISU55_RS09580 2115833 .. 2115864 + -10.4  -3.79043   GTGTGAATTTTTTAG      GATAGTTATATCCA TTTC TGAATATAACTATC       TTTCGGTTAGTAATG  86 70
ISU55_RS09610 2126468 .. 2126503 +  -2.6  -5.49809   ACCATTCAGAATTTT    CGAG-AGGCCACTGA ACTATTC TTGGTGGCCTTCTCC    TTTTTTTCCGCTTTG  80 46
        oppA 2128931 .. 2128958 +  -6.9  -3.66018   GCAGTAATGTATGAA        GGGCAGGCAAC TGAGTT GGTGGCTGCCC         TTATTGCACTAATGA  65 34
        oppB NONE
        oppC NONE
ISU55_RS09630 NONE
        oppF 2133325 .. 2133341 +  -4.5  -5.05228   ATTGACGAATTAAAA              CATATTA AGT TAATGTG              TTTTTGTCATTTAAT  77 486
ISU55_RS09640 2133732 .. 2133765 + -16.9  -3.80114   GAGCTGCTCTTGCTC     ACCTCAGTCACTTAG TTAT CTAAGTGACTGAGGA      TTTACTCGATTGCTG 100 117
ISU55_RS09660 2136527 .. 2136543 +  -8.7  -5.48213   ATTATGGTAATAAGG              CAGTCTC TAT GAGGCTG              TTTTTGTTTTGAATC 100 47
ISU55_RS09665 2137531 .. 2137552 +  -4.4   -4.2803   TATTATTACTTTTAT           GCCACC TTATAAACTC GGTGGC            TTTTACATTCGGATA  63 83
ISU55_RS09670 2138003 .. 2138038 +   -18  -2.88999   TTAACAAAAAAAACT    TATAATAATACGCCTA GCTT TAGGCGTATTATTATA     TCTAGTGTCTACAAC 100 71
        tonB 2140316 .. 2140327 +  -3.6  -4.02022   CACCATTTTCAAACC                GCTG GTGA CGGC                 TTTATAGTCCTTCCA  59 445
ISU55_RS09705 NONE
ISU55_RS09710 2144370 .. 2144392 + -16.4  -4.68593   TGTCTACAGTTTGAA           CGCCTGATGT AAT ACATCAGGCG           TTTTTGAATGATACA 100 71
ISU55_RS09720 NONE
        ompW 2146446 .. 2146478 +    -7  -5.30155   CATCAGTTAGGCGGG     CAGTAAGGAGGTGCG GTTA TGCGCCTCC-TCCTG      TTTTTTACTTAATCA  89 135
ISU55_RS09770 NONE
ISU55_RS09775 2156049 .. 2156071 +  -6.4  -3.27498   AACAACATATCTATT           TATTAGAATC ATT GATCCTAATA           TTAGTGTAAAATGTC  59 206
        rluB 2157352 .. 2157382 + -15.6  -4.42235   GACGTGAATAATGCT       TATTGCCGCAGTTT TTT GGACTGCGGCAATA       TTATTTTTAACGCTT 100 94
        sohB 2160025 .. 2160054 + -10.8  -3.44848   GTGATGGCAATAAAT       GCAGGGGGTAATC TGAAC GGT-ACCCCCTGC       TATTTGCTACCAACC  83 58
ISU55_RS09805 NONE
        topA 2163457 .. 2163473 +  -9.4  -5.46657   CTGACCTCGGTAAAG              CCAGCC TTCGC GGCTGG              TTTTTTATTGGGCTA 100 86
        cysB 2164749 .. 2164782 +  -3.3  -3.97307   CATGTTTAATGATAT     TAAATTGCCAGTGAA ATGA TTTAGTAGCAATTTA      TTATTGTTAGCTGAA  56 7
ISU55_RS09820 2166121 .. 2166141 +  -4.7   -2.7728   GCTAGACCTCATAAC            ATTAGGGTT ATA GACCCTAAA            TAATTCGAGTTTCAG  49 186
        acnA 2169102 .. 2169128 + -10.2  -4.16033   TTATCAGCCTCTAAA         GGGTAGGTATAA TTA TTGAACCTACCC         TTATTCTTATTTCGC  91 131
        pgpB NONE
ISU55_RS09840 2171499 .. 2171513 +  -5.8  -2.91656   TCAACAAGGAATAAT               TTTCTA TGT TAGAAA               TGCTGTTTCTGCTGT  54 27
        lapB 2173053 .. 2173063 +  -5.4   -4.3534   GATTTTTTCTTTTAA                 TTCC AGA GGAA                 TTTTAATGGTTAAGG  69 405
        pyrF NONE
        yciH 2174658 .. 2174695 + -14.5  -3.62859   TTTTCCGCGCAGATA   TAAAATACGGCGT-TGAT ATT GTCAAACGCCGTATTTTA   TTTAGAACTTCTAAT 100 56
        araD 2176277 .. 2176298 +  -5.1  -4.56597   AACATAAATAATGAG           CCCGTGT TCAGTCTT GCACGGG            TTTTTCCAGCCAGAG  70 47
         fsa 2177847 .. 2177866 +  -6.4  -2.72463   ATCAGCCGTACCCAT            GCCCACAGC GTG GTTG-GGGC            TGCTTCGACCTGAGT  51 341
ISU55_RS09900 NONE
ISU55_RS09905 2185536 .. 2185546 +  -2.4  -4.08767   TCAATAATGCATGAA                 CCGC AAC GGGG                 TTTTCGGGCAATACA  55 250
ISU55_RS09930 2190351 .. 2190362 +  -4.4  -4.26351   CTTGACGAGGATCAA                CAAC GTCG GTTG                 TTTCTTCCGTTGATC  63 447
ISU55_RS09955 NONE
ISU55_RS09960 NONE
ISU55_RS09965 NONE
ISU55_RS09970 NONE
ISU55_RS09975 2199974 .. 2199990 +  -5.1  -4.49311   CAGGCCTCTGAGGGT              GTCGCTA TCA TAGCGAA              TTTTATAATACTGAT  70 151
ISU55_RS09990 NONE
        araG 2206368 .. 2206379 +  -7.2  -3.09015   ATATTGCCACCAATA                CCGC GTCT GCGG                 TTGCCTGACTGTGAA  62 6
        araH 2207585 .. 2207609 +    -5  -3.49475   AGTGGCTTTTACTCA         TCCGAGCTCAC TGAC GTGAGC-CTGA          TTGTATAAAACTGAC  55 156
        araC NONE
ISU55_RS10010 2209829 .. 2209856 +  -7.8  -6.32976   AGGGTGGAAATATCT        CTCTGGG-CAC AATCTCC GTGGCCCAGAG        TTTTTTTATTTTTTT 100 70
ISU55_RS10015 2211136 .. 2211148 +  -6.3  -4.03888   TGATAGAAAACGCCA                TCCTT TTT AAGGA                TTATTCTTGTGCATC  67 155
ISU55_RS10020 2211814 .. 2211831 + -12.7  -4.82901   AATAGAGATTTAAAA             CGGAGCC AATG GGCTCCG              TTTTTATCAAACAAA 100 28
        fumC 2216925 .. 2216938 +  -3.7  -5.29782   TGGAGGAACAGCTCG               GCCAG CATT CAGGC                TTTTTTCTAGCTGTA  82 450
ISU55_RS10050 2220273 .. 2220294 +  -5.9  -2.90496   GAAGCGCGAAAAATA           CTCTTTTAC AAGA GTTAAAGAG            TCATTTAGGCAAAAA  54 189
ISU55_RS10055 2221555 .. 2221571 +  -5.3  -3.19389   GTGTATTAAATCTAA              TAATTAA GAG TTAATTA              TTAGTGGGTACCTTC  53 40
        bioD 2222424 .. 2222437 +  -2.3  -4.07124   GATCTTACAGCTATT               TCAGG ATAA CCCGA                TTTATATCCATCCTA  53 17
ISU55_RS10085 NONE
ISU55_RS10090 NONE
ISU55_RS10095 2229975 .. 2230008 + -10.3  -4.74453   AGCTCTCTCAATTCA     ATACGCAGGCGG-TGA TCA TCATCCGCCTGCGTTG     TTTTTCAATCTATTC 100 398
ISU55_RS10105 NONE
ISU55_RS10110 NONE
ISU55_RS10115 2238815 .. 2238841 +  -7.9  -5.00616   AACGTGCCACAAAAA         TGCGCAACTCC CCGAC GGAGAAGCGCA         TTTTTTAAACAGCAG  95 71
        ivbL 2240254 .. 2240278 +   -15  -4.96501   AGAAAGATTCCCAAA         CCCCGC-CGGC GCCA GCCGAGCGGGG          TTTCTTTTTATCGCC 100 55
        ilvB NONE
        ilvN 2242313 .. 2242355 +   -15  -3.65046   AAAGGTGACGTTGTC ACACGTTAAACCCTGTCG TTACTGC CGACAGGGTTTAACGGGC TTATTCGAGTAGGGA 100 33
         ogt 2248312 .. 2248323 +    -3  -2.98778   CATGAGGGTTATCTT                TTAG GTTG CTAA                 TCATTGTTGCTCTTA  44 14
ISU55_RS10160 2249164 .. 2249196 +  -7.2  -3.41125   TTAGATTGTTAGAGA      CCAGATCAATAA AATGCCTAC TTATTGGTCTGG      TTATCCCTCTCTCAC  66 41
        uspE 2250392 .. 2250403 +    -3  -3.58329   GGCGCGGCTCGAGCC                TACA TGGA TGTA                 TTTACGGCGTCTTTA  51 178
ISU55_RS10180 2255000 .. 2255018 +  -9.5  -4.33785   AAATAATTATCTTAA             GGGCGGC CAAGT GCTGCCC             TTCTTTTATCCGTGT  88 35
ISU55_RS10185 2256900 .. 2256922 +   -12    -3.646   TACTTGCAGCGCCAA           TGCCGTAAGC TGA GCTTGCGGCG           TTCTCTCTAATTCAG  82 274
        rstA NONE
        rstB 2259479 .. 2259500 +    -3  -3.45571   CGAACTTACTATTTC           GTGCAC TTACTATTTC GTGCAC            TTGCTATTTCGCGAA  49 65
ISU55_RS10205 2261055 .. 2261073 +   -16   -4.8048   TTCGGAAATAAATAT             CCTCCGGC ATA GCCGGAGG             TTTTTCATATGCGCC 100 48
ISU55_RS10215 NONE
ISU55_RS10220 2263854 .. 2263873 +  -2.2  -2.81815   CATATAATAAAGCCA            GTGA-GGTA TTC TACTGTCAC            TAATTAGTGATTAGG  41 355
         hns 2265673 .. 2265696 + -15.4  -5.88197   CTATTACTATCGAAA          CACCCTCCTA TTAA TAGGAGGGTG           TTTTTTTGTCTTTCA 100 58
ISU55_RS10245 NONE
        purU 2271842 .. 2271853 +  -3.6  -4.02022   CACCATTTTCAAACC                GCTG GTGA CGGC                 TTTATAGTCCTTCCA  59 372
ISU55_RS10260 NONE
ISU55_RS10265 NONE
ISU55_RS10270 2273853 .. 2273878 +  -7.1  -4.03137   TAACCAAACATTACT         GTGAAGAATATT TAT AATAT-CTTCAC         TTTCATTAATTATAT  69 503
        xthA NONE
ISU55_RS10285 2276638 .. 2276661 +  -7.4  -3.38361   TGATTTTGATAAACA          CAGCAACGCG TGCA CGGGTTGTTG           TTCGTGTTACGGTTT  62 165
        sppA 2282649 .. 2282670 + -14.5   -4.7497   ATACAGATAGATATT           CAGCCCGAT ACCC ATCGGGCTG            TTTTTCCTCGCTGAG 100 54
        ansA NONE
        pncA 2284434 .. 2284455 +   -13  -5.47159   CTTTCTGCGCAAAAA           TGGGCGCC TGCCTC GGCGCCCA            TTTTTTGTATTCAGA 100 44
        gapA 2286675 .. 2286692 + -11.3  -5.05116   AGATTTCTACCTAAA             GCCACTC ACGC GAGTGGC              TTTTCTTGTTTATAG 100 52
ISU55_RS10340 2287864 .. 2287880 + -13.7  -2.78495   CGGTCAATATAAAAA              TGGGGCC TTT GGCCCCA              TGGTCTTGCTCATAG  93 52
        yeaG NONE
ISU55_RS10355 2292473 .. 2292511 +  -5.3   -4.9792   TTAGCAGCAATATCA   GCCGGTTAATTTTTTCT TGTTC AGAAAGCATTTTCCGGC   TTTTTCTATGGGCTA  78 37
ISU55_RS10360 2293863 .. 2293876 +  -3.1  -2.80344   CAATAGGCGAACTAA               TGTGCC TTC GGC-CA               GTTGTTCCGTCACCA  41 201
ISU55_RS10370 2295720 .. 2295756 + -15.4   -5.5112   CCGCCATTACCTGTC    TGCTATTACCTGTCTA CCCTC TGGGCAGGTAATAGCA    TTTTTTATTGATGAG 100 51
ISU55_RS10375 2297159 .. 2297211 +  -5.7  -3.09878   ACTAACAACGGCAAA TAATCGCGTTACACGATATTAAC GGATGGG GTGAATATCGTGTAACGGGGCAA TATTCAGTGGCTGAA  55 23
ISU55_RS10385 2300660 .. 2300676 +  -7.9  -3.43261   TTGTCAATAACCTCA              GGGGCAT TAA ACGCCCC              TTCGCTTTTCTGCTT  68 205
        nhaB 2303367 .. 2303386 +  -3.6  -3.25595   AGCCTGTCTTGTGCG            GGAAAAAA CTGA TTTTTACC             TAATTTTGCTTTTGG  49 157
        dsbB 2304027 .. 2304045 + -11.7  -4.98522   TATCTTTATTATCAA             TGGCGCC TCTCT GGCGCCA             TTTTTATATCAGATT 100 51
ISU55_RS10410 NONE
ISU55_RS10415 NONE
ISU55_RS10420 2309174 .. 2309225 +  -2.4  -5.04385   GGTTTAAACAGAGTA TTACCGCAAAATGA-CTCGCTACTT GAC ACGTAGTAACATCGGTTTGCGGTAA TTTTTTGAGACTGTA  68 201
ISU55_RS10425 2310861 .. 2310871 +    -4  -3.55368   CTCAATTCTGTCTTT                 TAGA ATC TCTA                 TTCTATCGCTTGCAT  52 375
ISU55_RS10450 2316738 .. 2316771 + -13.3  -3.14125   GTTTAAATCTTGATA     GCAGATCACT-GCCTC TTG GATGCTAGTGATCTGC     TGTTGCATGTCTGAC  81 69
ISU55_RS10485 2320399 .. 2320412 +  -9.5  -4.43037   GCTAGAATGCAAAAA               CCCGC CGGA GCGGG                TTTAGTTTTTATTCG  95 68
ISU55_RS10625 2342839 .. 2342864 +  -5.4   -3.4071   CACCAATGAGGGCGA         CCATGCCGAG GACTTG CTCGATATGG          TTATGCGTGATTATT  57 335
ISU55_RS10635 2343122 .. 2343141 +  -4.4  -3.36515   TATCATGATATTCAG            TTTTTTAC GATC GTAAAGAA             TATTTCACAATAAGA  51 73
ISU55_RS10670 2347259 .. 2347274 +  -4.6  -4.37092   CGGGGGGCCATTACT              CCACGC TGAA GCGTCG               TTTTATAACGGCCCT  66 491
ISU55_RS10685 2350361 .. 2350374 +  -2.3  -4.43012   GCGACGCTCATAGTT               ACTGC ATTG GCAGG                TTTTAATATTGAGCT  60 316
        minC NONE
        minD NONE
        minE 2355400 .. 2355431 + -17.5  -3.43117   ATGATTTCTTCTCAA      TAACGCCCCTGTA TTTATT TACAGGGGCGTTA       TTCTCAATTGACTGT 100 37
ISU55_RS10735 2359359 .. 2359378 +    -5  -3.86897   GGCGGTATTATCACT            TGCTGAGCA ATA TGC-CAGCG            TTTGTAACCGGTCGC  61 147
ISU55_RS10755 2363214 .. 2363241 +  -9.8  -2.52015   AAGCCACAAAAACAA        AGGAGAGTAGCC GCCA GGCTACCCTCCG         CTTACTGCCTCTGGC  70 110
ISU55_RS10780 2368593 .. 2368613 +  -5.4  -4.07687   TTAATGACATTTTAC            CATCGGAT CCATT ATCCGCTG            TTTTAACAACACCAT  65 294
         pyk 2370320 .. 2370341 + -15.9  -4.36595   TTGTCAATAACCTCA           GGCCCGCTA TCAC TAGCGGGCC            TTTTACCTTTAACTG 100 249
        znuC NONE
        znuB 2375584 .. 2375631 + -15.7  -3.56318   CACGAGGATAGTCAT CACTTCACGCTGTGGGGTTTA GGCCTA TAACCCCCACAGCGTGAAACG TATTATTCTTCCCGA 100 30
ISU55_RS10850 NONE
ISU55_RS10855 2383975 .. 2383991 + -10.8  -4.46072   GCAACCGTTAGTCTG              GGCGGC ATATC GCCGCC              TTTATGTTTATTCCC 100 85
        cmoA 2384903 .. 2384913 +    -4  -2.80589   GAAAGCAGGAGAGGC                 TCAA TGA TTGA                 ATTTGGCGATTTTTA  46 19
        cmoB 2386329 .. 2386345 +  -9.5  -2.60496   ATCGGGCCTTGATCC              TTGGTTG CTG CAACCAA              ATCTTTCAACAGAGC  65 477
        argS 2390356 .. 2390366 +  -5.4  -2.80816   GGTGGTCCCTTTTAC                 CGAA ATA TTCG                 TCTCATCAATACCGA  48 403
        mdtH 2402595 .. 2402642 + -10.8  -3.14931   CAGCAGCTAACGTTA TGTCCCTTATCAACCGGAGACGT TTT GCCTTTCCGGTTGATAAGC-ACA TTCCTCGCGCATACG  79 31
ISU55_RS10915 2403630 .. 2403641 +    -3  -4.36914   GCGAAAGCATCCCGA                TGAA TCTA TTCA                 TTTTATGACCAAAAA  61 108
ISU55_RS10930 2405724 .. 2405742 +  -8.1  -5.80951   CGCCAAATAATAAAC             CCCGACC TTTAT GGTTGGG             TTTTTTCTTTTGCAT 100 36
ISU55_RS10955 NONE
ISU55_RS10960 NONE
ISU55_RS10965 2411602 .. 2411613 +  -3.6  -3.04715   TCTGTCACAGTCCAC                CGGG AAAG CCTG                 ATTTTACAGGAGATA  46 13
ISU55_RS10970 2412804 .. 2412832 + -10.3  -2.87564   TCCTTGGCGGGTACA        GTCGCTGTATTGT TCG ACGAAACGGCGAC        TGTATCAGCGAATGA  75 113
ISU55_RS10975 2413874 .. 2413888 +   -10  -3.18452   TGACTCCCCCGCCAC               CGCCAA AAA TTGGCG               TTAAATTCACCTAAT  74 7
ISU55_RS10980 2414137 .. 2414158 +  -6.5  -5.95166   CAAATTCAAAAATAA           GGTTCTGAC GAAA GTCGGGGCC            TTTTTTTTGGTTACA 100 39
        dauA 2416868 .. 2416891 +   -11  -5.46657   TTGTCAGCAGTCTGA          GGCAGCTTAG TTGC CTACGCTGCC           TTTTTTATTGCCCTA 100 237
        lolB NONE
        ispE 2424565 .. 2424578 +  -3.9  -3.48593   TCGCCCCTGATTACT               GATAT GACA ATATC                TTCTCTGGACGCATG  51 322
         prs 2425696 .. 2425721 +  -8.9  -4.98672   GCAGATAAAGAAAAA         CCCGTTGAAGC CTGT GCGACAACGGG          TTTTCTGTTTTTGAA 100 165
         pth 2427092 .. 2427117 +  -3.3   -4.8384   TAAATTTTGATTACA         TCAATTCGCTA AACT TAACGGGTTGA          TTTTTAAGTTATTTA  68 135
        ychF 2428300 .. 2428317 + -11.3  -5.50723   AAAAATGCTATAAAA             TCCACGC AATT GCGTGGA              TTTTTGTTTTCATAG 100 88
ISU55_RS11070 2433251 .. 2433267 +  -3.6  -3.04398   TCGCCAGAAGAGAAA              ATGGCG AAATA CGCCAG              ATTTTACAGAAAAAA  46 491
ISU55_RS11090 NONE
ISU55_RS11095 2438106 .. 2438124 + -10.3  -4.22676   TGCATACAGGTTTAA             GAGGAGG ATCTC CCTCCTC             TTCTTCTTTCTTGCT  91 126
ISU55_RS11100 NONE
ISU55_RS11105 NONE
ISU55_RS11110 2440523 .. 2440550 +  -8.4  -2.90888   TTCAGTAATAAAAAA        TTAGTGGGGTCG TTGA CGGCTCCACTAC         TGCTTATATACTCGT  65 33
ISU55_RS11115 NONE
ISU55_RS11120 NONE
ISU55_RS11125 2444080 .. 2444098 +  -9.6  -2.78695   CATGAGTCCAAAACC             CCGCTAAT ATA GTTAGCGG             ATTACTTTATCTCAA  70 19
ISU55_RS11130 2444363 .. 2444392 +  -8.5  -4.57353   AACTTAGTGACTCAA       GCCGGGAGTGGCGG TCT TC-TCACACCCGGC       TTTTATCTAATAGCC  87 113
ISU55_RS11135 2445125 .. 2445136 +    -3  -4.40478   ATTTCCCATGAAATC                CATA TGGT TATG                 TGTTTTTTCTATTTG  61 43
ISU55_RS11140 2446085 .. 2446097 +  -6.9  -4.08767   TGCTGGAAACGTGCA                CCGCT AAC GGCGG                TTTTCACCAACTCAG  69 239
ISU55_RS11155 2451752 .. 2451784 +  -3.4  -2.53164   AAGTAAATAATTTTA      ATAATGGGGTCTGG ATTAA TCAGACCTCATAAA      ATTGATCATGGATAA  42 35
ISU55_RS11165 2454884 .. 2454906 +  -6.3  -4.65933   TGGCAATATTGAGGA           GCAGGCAAT TAAAT GTTGTCTGC           TTTCTTTTAAAGATG  77 62
ISU55_RS11170 2455660 .. 2455670 +  -5.4  -4.19238   ACGGGCAGTTAACTG                 CTCA ATC TGAG                 TTTTGGCATTCGCCA  65 204
ISU55_RS11220 2466660 .. 2466673 +  -5.3   -2.8459   GCCACCAGCAACCCT               GTTGA GCCT TCAAC                TGATGTGTTTCTGTA  48 301
        hutC 2469468 .. 2469490 +  -7.1   -3.9009   TTACGCAATTGTGAA           TTCGCTATC TTGCT GATAGTGAA           TTTATAGGCTAGGTT  70 74
ISU55_RS11240 NONE
        hutG 2471789 .. 2471806 +  -8.3   -4.3207   AGCTCACAGTAAAAA             GACGGGG TTTC CCCCGCC              TTTCTATCTTTCTAT  82 168
ISU55_RS11265 NONE
ISU55_RS11270 2474938 .. 2474953 +  -3.2  -4.30719   CTGCCGATGCAGTGC              GGCG GAAAGCAA CGCC               TTTGTTGTCAAACAG  61 76
ISU55_RS11315 NONE
ISU55_RS11320 2483632 .. 2483661 + -11.7  -3.31428   CAAACAGGTACTCAG       TAGCTCTGATT-AG TAA CTCAATCAGAGCTA       TCTATTGTATTTAAA  86 117
ISU55_RS11345 NONE
ISU55_RS11350 2487586 .. 2487601 +  -3.2  -3.45324   ATTAACAATAAAATC              GCGG GTGTGCTG CCGC               TGTTTGGTAAACGTC  49 36
ISU55_RS11355 2488353 .. 2488368 +  -3.3  -4.89233   GTTAACAATGCTCAC              TACTC CCCTTT GAGTA               TTTTTGGTGTTGGTA  68 499
ISU55_RS11370 NONE
         hcp NONE
ISU55_RS11380 2491732 .. 2491744 +  -3.5  -3.07192   GCCCATGCATTCAAG                TAAAT ATC ATTTA                TGTATTAGCAACGTT  48 23
ISU55_RS11400 2494262 .. 2494282 + -10.5  -2.90714   CGCACAGCCATAAGC            CGAGGGATT TTA AATCCCTTG            TGTCTACCGATTTCA  70 206
ISU55_RS11435 2498645 .. 2498664 +  -4.9  -3.33509   CCGCCAATAACGCCT            AGGGCCA GCATAG TGGCCCC             TTCACTTCTTTGAGC  53 31
ISU55_RS11440 2499242 .. 2499253 +  -4.4  -3.24516   TCAGCAGATATCGCC                TCAG TCAC CTGA                 ATTTTCCTGATTTTA  50 159
        cycA 2502832 .. 2502866 + -17.4  -3.59738   ATAACCACAGTGTGA     TAAAACGGTGCCAGAG GTG TTCTGGTACCGTTTTA     TTTCCCCCTCTAATC 100 37
        wrbA 2505174 .. 2505196 +  -7.7  -3.42437   TAGACGTCATAAAAA          GCACCGCGCG ATGA TG-GCGGTGC           TGTATTTTAAGCTTC  68 82
        putA 2514959 .. 2514972 +  -9.5  -4.07568   CGGTTTATCAATTAA               GGCCC TTCG GGGCC                TTTTGCCAACCAACA  83 98
ISU55_RS11505 NONE
ISU55_RS11510 2516271 .. 2516297 + -10.1  -3.82218   CATCCATGTAGGCTC        GAG-CCGCGCCA TCCT TGGCGCGGACGC         TTTACTCCTCTGCCT  84 240
        fliD NONE
        fliS NONE
        fliT 2525576 .. 2525589 +  -3.1  -5.46657   TTATAGTCGAAGTGG               CTTGC TATG GTAAG                TTTTTTATTAAAATA  82 234
ISU55_RS11565 2526709 .. 2526720 +  -5.8  -4.40561   CTTTTAGATATTTTG                CGCT TTAA AGCG                 TTCTTTTTAAGGCCG  70 191
ISU55_RS11570 NONE
ISU55_RS11575 2529916 .. 2529940 +  -2.8  -3.92276   CACGCTATGCTTAAT         CGCTACCGGCC TCCT GGTCAGTA-CG          TATTTTATCTGTCAT  54 89
ISU55_RS11580 2530775 .. 2530790 +  -6.1   -3.3382   AAGATAACGCAAAAA              CCCAC AGCTAA GTGGG               TTGATATCTCATACG  59 176
        fliF NONE
        fliG NONE
        fliH NONE
        fliI 2537405 .. 2537415 +  -4.6  -3.63515   GTTTCGTTTATTTCC                 CGGC TAA GTCG                 TTATTAAGGCTGAGC  57 43
        fliJ NONE
ISU55_RS11630 NONE
        fliL 2539997 .. 2540019 +  -3.4   -2.8294   TCAGCGATGTGCTGT           TTACCGCATT CAT ATTGCGATAA           TCATTATGGGCGATA  43 3
        fliM NONE
        fliN NONE
        fliO NONE
        fliP 2542771 .. 2542783 +  -3.3  -4.89339   AATTGTTACTGGGTT                CACTG GCA CAGAG                TTTTTATAGCTGATT  68 0
        fliQ 2543166 .. 2543182 +  -4.3  -3.72576   CTGCCCACGTTGATT              GGCTAGC CAT GCTGTCC              TTTGATACCCACCAA  54 20
        fliR NONE
ISU55_RS11670 2544350 .. 2544365 +  -8.2  -3.01712   ACCTTAGTTAACAAA              GCGCCC TCTA GGGTGC               TATTAAGCAACGCAG  65 30
ISU55_RS11675 2544843 .. 2544860 +  -8.3  -4.41548   TTATCGCCCCGTTTC             GGCGGGG TTTA CCCCCCC              TTTTCTGACCTCTCG  87 59
ISU55_RS11710 2554654 .. 2554664 +    -4  -5.40072   GTACCGTATCAATGG                 TATC AAA GATA                 TTTTTTTCCGCAGCA  85 404
        flgA 2566115 .. 2566173 +  -4.1     -3.94   GACGATGGCACAATT CGGATTATGTT-ATAGTCGTTAAAGTTT TTTT AACCTTTGCCGATAATTAACATAAGCCG TTATTTGCAGGTTAA  59 11
        flgM NONE
ISU55_RS11780 2567092 .. 2567122 +   -17  -3.51161   ATCCTTTTAAAAAAA       CAACGCCGCTCA ATTAACC TGAGCGGCGTTG       TTCTCTGGACGTTTG 100 76
ISU55_RS11815 NONE
ISU55_RS11820 2576486 .. 2576503 +  -8.4  -3.89336   TATGACTGAAATAGG             CTGGGC TTAATT GCCCAG              TTTCGCTTTGGTTAA  75 32
ISU55_RS11845 2580425 .. 2580444 +  -4.9   -2.7094   TCAGCTTCAGGCCAA            GCCTGTG CTAAAT CCCAGGC             GTTCTGTAGCTGACA  44 191
        purT 2588543 .. 2588570 +  -7.1  -5.04597   ACGCTAGCAAATAAA        TAAACCCGC CATTCAGCCA GCGGGTTTA         TTTTTATCTATCAAT  89 61
        pabB NONE
ISU55_RS11895 2591036 .. 2591051 + -11.8  -3.07962   TATTTGACTCATAAA              GCCGCC ATTT GGCGGC               TGTTAACCTGTGACA  86 34
ISU55_RS11900 2593250 .. 2593268 +  -8.8  -4.82901   AAAGGATGGCGCGGC             TAGCCCCC AGG GAGGGCTA             TTTTTATGCAGGGAA 100 176
        hpaR 2603626 .. 2603665 +  -4.8  -3.03212   TCGCGGGTACGTTGT  CAATAACCTCAGGGGAGC CGAA GCGCCCCTGAGGTTCCAC   TCTCTGCTTACTCTT  50 80
        manX 2606846 .. 2606860 +  -4.2  -3.70405   GAAAGGTAATACCCT               GTCCTA TTT TGGGGC               TTGGTTATTTTACTC  54 60
ISU55_RS11970 NONE
ISU55_RS11975 2608617 .. 2608640 +  -8.8  -4.89567   GATTATCTTCATCCA          AAACCGGGGG CTTG CTCCCGGTTA           TTTTATCTTTTAGAC 100 48
ISU55_RS11980 2609447 .. 2609457 +  -3.2  -4.67943   TTGTATTTGGGGTTG                 TCGG CAT TCGA                 TTTTATATGTTAAGG  65 217
ISU55_RS11990 NONE
ISU55_RS11995 NONE
ISU55_RS12000 2612327 .. 2612350 +  -9.6  -4.51196   ATAGAAAAGCAAAAA          TCCCGCTTAG TTTC CTAAACGGGA           TTTTCTAAATTTGGC  95 138
ISU55_RS12030 2618229 .. 2618243 +  -9.2  -3.56594   CTTCAAGATAGATGA               CCCGCC CTA GGTGGG               TTTCGACCCATTTAC  70 424
ISU55_RS12040 2619459 .. 2619474 +  -2.6  -2.99273   TCTTTTTTAAGAAAA              TAGACT GAAC AGTTTA               ATTTATGATGCTGAG  43 391
        mgrB 2619880 .. 2619895 +  -2.4  -3.94773   TGAGCAGCATAAGCA              CGCGTG ACTG CTTGCG               TTGATTTTTTAACTA  53 109
ISU55_RS12055 2620287 .. 2620316 + -12.9  -3.10071   ATAAACGTGTCCCGA       TGCTGGCACTACC AACA GGCAGTGTCAGCA        TGTTACCTGCAATTT  95 37
ISU55_RS12060 2620908 .. 2620928 +  -5.5  -4.28361   ACAGGAAGTCGCTAT            CAGTAAG CGTTCTT CTTACTG            TTTTCGTGGAGTTGA  68 96
ISU55_RS12065 2621367 .. 2621383 +  -3.7  -4.20367   AAAAACCGCCGCAGA              CTCATTT ATG AAATGCG              TTGTTTATTCACACC  60 201
ISU55_RS12070 2623035 .. 2623071 +  -6.8  -5.28481   AATTCGCCCTCAACC    AAGCATATAACCAT TTTAATATT ATGGTTATATGCTG    TTTTTTAGTTAAATA  89 259
ISU55_RS12080 NONE
        cspE 2625095 .. 2625110 +  -7.5  -5.32699   CGTTTGCTGTAAAAA              CCCGC CTTTGT GCGGG               TTTTTTCATATTTGG  91 45
        rlmA 2627191 .. 2627212 +  -6.5  -3.15699   GACTATTCGCTTTAT           ATCCCCTGT AGTT GCAGGGGAG            TATTGCTGAGTAAAT  57 61
ISU55_RS12110 2632662 .. 2632700 + -24.8  -3.00946   AACAGGTGCTTTACT   GAAATCCCCCGGCGATTT GAT ATATCGCCGGGGGATTTC   TCATTTATCGCGCAG 100 93
ISU55_RS12140 NONE
ISU55_RS12145 2640924 .. 2640943 + -12.8  -2.94322   CGTAAATTAACCTCA            GGCCGCCG TTTA TGGCGGCC             TACTTTGCGTCCAAT  95 31
ISU55_RS12150 NONE
ISU55_RS12160 2643571 .. 2643597 + -10.3  -2.73875   AATAACATCCATCCG         GCGGTATTGAA TTATT TTTAATACCGC         TGATATTACCCAACG  75 36
ISU55_RS12165 NONE
ISU55_RS12170 2645512 .. 2645546 +  -6.5  -3.51924   GGTTAAGGGGAGGGT     TAAGGAACCGGGT GTCTGATTA GCCCGGTTCATTA     TTATCTGAATCACGG  61 35
ISU55_RS12175 2646441 .. 2646499 + -16.3  -2.81072   TGAAGTCGGGCAAAC CATTTGCGGCCTAAATACCG-CTTGCCGA TAG TTGGCAAGACGGTATTTAGGC-GCTGAGG ATTCTGTTACCTCGC 100 77
ISU55_RS12180 2646921 .. 2646944 +   -11  -4.81851   AGCCAAATTAAAGAA          CCCTGCCTAG GTAA CTAAGCAGGG           TTTTTGCATTTCAGT 100 36
ISU55_RS12195 NONE
ISU55_RS12200 NONE
        argG 2654613 .. 2654640 + -14.2  -2.67747   TGCGCGACCCCAAGC        GGTTAAGGGGAG CTTC CCCCCCTTAACC         CTTCTCGTGTCACAG  95 105
ISU55_RS12235 2660309 .. 2660337 +  -2.3  -3.57627   CCGCGACAACCAAAT        TCAGCGTCGCAAT CGG GTTACGGCGATGG        GTTTTTCTATCGGCA  47 384
ISU55_RS12245 2665787 .. 2665798 +  -3.6  -4.02022   CACCATTTTCAAACC                GCTG GTGA CGGC                 TTTATAGTCCTTCCA  59 372
        sbcB 2670684 .. 2670695 +  -4.4  -4.84761   TGCCTGTGCGGCAGT                GAAC TTAA GTTC                 TTTTTGTCAGCATCT  71 144
ISU55_RS12285 NONE
ISU55_RS12290 NONE
ISU55_RS12295 2677160 .. 2677185 +  -4.8  -3.68435   GCCATGCAACGCTAT         GGAA-CGGAAT TTCAT GTTCCGATTCC         TGTTATTTTCAACAG  57 123
ISU55_RS12300 NONE
ISU55_RS12305 2677771 .. 2677802 +  -7.2  -2.72739   GGCTGTCCTCGTTCA      CCCCAGTCACTTAC CTGT GTAAGCTTCTGGGG       ATTCTCTCAGTTGCC  58 55
        hisL 2679217 .. 2679243 +   -21  -5.52023   AGAACGCAGTAGAGA         GCCCTCGGAAGA TAA TCTTCCGAGGGC         TTTTTTATTGCTCAT 100 71
        hisG NONE
        hisD NONE
        hisC NONE
        hisB NONE
        hisH NONE
        hisA NONE
        hisF NONE
ISU55_RS12355 2686606 .. 2686630 +  -8.6  -5.06414   TCACTGGCAAAAAAA          CGCCTCCA ACTTATCAC TGGAGGCG          TTTTTATTGGGCAGC 100 54
ISU55_RS12375 2693341 .. 2693354 +  -2.3  -4.07687   ATCAATATATTGAAA               CGCCA TGAC TGGCA                TTTTCACAACACCAT  55 167
ISU55_RS12380 2695696 .. 2695717 +  -8.7  -3.39908   AGTTGGATACCCTCA           CAGCCGG CCACTTTT CCGGCTG            TATCTTTTGCCAACG  71 48
ISU55_RS12385 NONE
ISU55_RS12390 NONE
ISU55_RS12395 NONE
ISU55_RS12400 2699943 .. 2699956 +  -8.1  -3.96469   CAGGGTCAGCTAAAT               CCAGC ATGT GCTGG                TTATTGTTGAGCTGT  72 217
ISU55_RS12430 2708200 .. 2708233 +   -14  -3.38522   CCTGGAAAAATAAAT     GATTAGGCCCGGTGG AGAAA CCATCGGGCCTA-TC     TCTTTCCACTACCTA 100 80
        metG 2715374 .. 2715392 +   -16   -4.8048   TAAAGAAATAAATAT             CCTCCGGC ATA GCCGGAGG             TTTTTCATATGCGCC 100 90
ISU55_RS12470 NONE
ISU55_RS12475 2720008 .. 2720031 + -12.4   -3.1506   AACTAGAAAATAATA          GCAGATCGGC TCTG GCCGAACTGC           TTCCTGCAAAAATTT  93 177
ISU55_RS12480 2721522 .. 2721534 +  -3.4  -3.19117   ACCGTGAGTGTCATT                GCAT CATTA ATGC                TATTCATAGTGTGAT  46 177
ISU55_RS12485 NONE
ISU55_RS12490 2722722 .. 2722746 +  -9.3  -2.98729   GTTGAACCCACTTTC          CCCTGGCGT GATAGCG ACGTCAGGG          TCTGTAATCCTTATC  71 36
         cdd 2724190 .. 2724201 +    -3  -2.67903   GGGCAATTGTCATAA                TTTG CTAA CAAA                 TGCTGTACATATTTT  42 294
ISU55_RS12500 2726121 .. 2726134 +  -3.9  -4.06182   TTATTAATGAATCAC               CTTTA TCAA TAAAG                TGTTTTTATAAATAA  58 172
        sanA 2727255 .. 2727281 + -13.1  -4.68846   TTGTCATTAACTTCA        GCCAGT-AGGGC TATC GCCCTGACTGGC         TTTTACTTTATTCCT 100 288
ISU55_RS12540 NONE
ISU55_RS12545 NONE
        fghA 2738497 .. 2738510 +  -8.1  -5.10461   CACATAAAACCCCAA               GCCCT TTCG AGGGC                TTTTTATTCGATAGA  95 65
      darA-c 2739005 .. 2739020 +    -4  -2.83903   TCCCAGTGAGATATT              CTTGTA TGCT TACGAG               TGAATTTTTAAACGA  46 104
        darB 2741670 .. 2741682 +  -4.1  -2.64765   AAAATGTGATAAAAG                GCGAT GTG ATTGC                TCGATTATCTAATTA  45 325
        darD NONE
        darE 2744620 .. 2744649 +  -9.3  -3.11687   TATCTGGCAGATATT       CGTTGAAGCCACA TCAT TATGGCGTCAACG        TTGCCTCATGATTCA  72 20
        moeA 2746416 .. 2746434 +  -3.1  -3.06815   ACCGTTTGCCATTCA             TCACCCT GTCGG AGGTTGA             TATGTTGCCGGAACT  44 7
        moeB 2747220 .. 2747241 +  -6.6  -3.05596   AATGAATACATTAAA           CTGGGGCAG AAATA CT-CCCCAG           TTGAATAAAAAAATC  58 39
ISU55_RS12590 2748577 .. 2748589 +  -7.7   -5.5762   TTACACAGAATTATG                GACAG GCT CTGTC                TTTTTTATATTTGCT 100 52
ISU55_RS12605 2752444 .. 2752475 + -12.3  -2.97613   TACAGTTTAAAGGTC      GCGCTC-CAGCAGG ATCAC CCCGCTGTGAGCGC      TATCATTAATTAATA  93 93
ISU55_RS12785 NONE
ISU55_RS12790 2799462 .. 2799481 + -10.6  -4.08064   CTCAGCGCCTTATCT            CCCCGCCC TGAA GGACGGGG             TTTTACGGCGAACTT  91 48
        tusE 2803587 .. 2803608 +  -9.5  -3.33162   GACGTTCAACTGCTT           GTGGATTGCC GCT GGCAA-CCAC           TTCTACGCTACCATC  70 199
        rlmI 2805009 .. 2805019 +  -2.4  -2.66733   ATATCTAAAAGGGTT                 CGCG TGT CGGG                 TAATGTAACTTGAAA  40 7
        hspQ 2805449 .. 2805479 +  -9.7  -5.00616   TGATTGCCAGGTTCG       CCACCCTGTGAGC AGCAC GCTGACAGGGTGC       TTTTTTAGAAAGCCC 100 69
ISU55_RS12835 2807069 .. 2807086 +  -2.7  -3.15249   CTTTCAGTAATCTGT             TAGCAAA CCAA TTGGCTA              TTACTGAAGGATATC  44 168
ISU55_RS12840 2807578 .. 2807598 + -16.9  -3.92592   AAAATAGGTAACTCA            CCCGGTGGT TCA ACCACCGGG            TTTAGTATTGAGCAT 100 34
ISU55_RS12850 2810318 .. 2810330 +  -4.1  -3.75763   TGCTCAACGCCAGCA                TCGGT AAC ACTGA                GTTTTTCTGTTTTAG  57 19
        yccS 2812502 .. 2812520 + -11.7  -2.63747   GCCTAAGGTACCCAA             GGGCCAC CCATC GTGGCCC             ATTATACGGTTTCAT  80 35
        sulA 2814278 .. 2814288 +  -5.4  -2.80438   TTAACCAAGGGCTTA                 GCTT TTA AAGC                 TCATTGCCTATTTGG  50 339
        ompA 2815405 .. 2815421 + -11.5  -5.93809   TTCTTTCGTGAAAAA              CCCCGCG CTA TGCGGGG              TTTTTTTTGTGCCCA 100 47
ISU55_RS12875 2816105 .. 2816137 + -11.3  -4.04149   CCTTATAGGCGCATA      TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA      TTTATCCTGTGATTC 100 99
ISU55_RS12885 2818631 .. 2818646 +    -9    -3.224   AATCGGACTTGCTCA              GCGTAC AGCT GTACGC               TATTCTGCGCACTTC  69 39
        fabA 2819231 .. 2819261 +  -8.5   -4.4521   CAATGCATTGTAAAA      TAAGGCGAATATGA TTAA TCATGT-CGCCTTA       TTGTTTTTACGTGAT  87 52
ISU55_RS12905 NONE
ISU55_RS12910 2822314 .. 2822326 +  -9.1  -3.61232   CATTCTTAGTGAATT                TGGCC GCT GGCCA                TGTTTCTATCAAACA  75 246
ISU55_RS12955 2833580 .. 2833592 +  -7.7  -3.26204   ATTTAATACCAATTC                TGAGC GCT GCTCA                TTGCTCAATTTAATT  61 378
        pncB 2840468 .. 2840482 +  -4.2   -3.7626   GTAACATAGCAACAT               CCCCAT TTC ATTGGG               TTGTTAACTATTTCT  57 342
        asnS 2842084 .. 2842114 +  -9.8  -5.09426   AACGTCAATTTGTAC       AAATAAAAGCCAGC TCT GCTGGCTTTTATCA       TTTTTTAAAATTCGA 100 59
        ompF 2843477 .. 2843496 +   -10  -5.48623   CCTAAGTTGAAAAAA            GACAGGGC CTCG GCTCTGTC             TTTTTGTTTCTATTT 100 72
ISU55_RS12990 2844918 .. 2844929 +  -5.8  -2.72661   CTGACCATAAAAGGA                TGGC CCAA GCCA                 TCCTTCAGACTGCTG  52 66
ISU55_RS12995 2845185 .. 2845200 +  -4.6   -4.4261   AAAGAGAACACAAAA              GACGCC TTCC GGCATC               TTTTGCTATTGAACA  68 63
ISU55_RS13060 2862915 .. 2862931 +  -6.5  -3.44622   CAATAAAATTTGAGG              GCCGG AAGTCAA CCGGC              TTAATTGTGCCAATG  60 189
ISU55_RS13120 2880898 .. 2880909 +  -2.2   -4.4634   TTGTTTATTTCGTTT                TGGC TGTC GCTA                 TTTATTGTTGCAGTT  60 278
        focA 2882207 .. 2882217 +  -2.4  -3.08211   CAACATTAACGTGTG                 GCCG CTA CGTC                 TGGTTTTCGAGAAAT  43 32
        pflB 2884572 .. 2884592 + -13.3   -4.3255   TGTTACAACATGAAA            GGCTCCACA TAT TGTGGGGCC            TTTATTCATTCAGAG 100 59
        pflA 2887125 .. 2887163 + -11.2  -3.43033   TTAGGTTTGGCCTAA CAACTGCCGCCATGCTGGA TGAA TCC-GC-TGGCGGC-GTTG  TCTTATATATTGATA  83 99
ISU55_RS13150 NONE
ISU55_RS13155 2890184 .. 2890204 +  -5.4  -3.29471   TGAGCTCACCATCCC            CACTTGCC AAGTC GGCAACTG            TTGATGTGATAACCA  55 511
        trxB 2900601 .. 2900625 +  -9.2  -5.53079   TTCACCTCGTTCTAT          ACGGGTGGCT ACATG GGCCACCCGC          TTTTTTATCTGTTTT 100 83
        cydD NONE
        cydC 2904540 .. 2904555 +    -4  -2.80816   ACAAAGAAAATAGCC              GCATTGG CAA CCA-TGC              TGTGATAGATGCAAA  46 70
         aat NONE
        infA 2905867 .. 2905892 + -13.3  -4.36778   GTAGTCCCCCTCCGG         CGCCCTTCCCA TTTA TGGCAAGGGCG          TTTTGCGTTATCTTT 100 84
        cspD 2910280 .. 2910313 + -11.2  -4.63007   TACCTGTACTTTGAT     TCAAAATGCCAGTC AATGAC GACTGGCATTTTTA      TTTTATCTACTTCTA 100 128
ISU55_RS13245 2914998 .. 2915009 +  -2.2  -4.19238   CTTTATCAATGACCC                TGCG TGGC TGCA                 TTTTCGCATTCGCGG  57 320
ISU55_RS13255 2917787 .. 2917799 +  -6.9  -4.44548   CAGTCGCCCCCCCCC                GCCCT CTG GGGGC                TTTTCCTTCCCTATA  76 56
         hcp 2919625 .. 2919659 +   -10  -3.39288   AGTTAATTATACCTT     GCCTGGTCAATCGC CTTTCTC GCCGTTGACCGGGC     TATTATTGCACGCTG  76 40
         hcr NONE
        poxB 2922817 .. 2922828 +    -3  -3.58329   GGCGCGGCTCGAGAC                TACA TGGA TGTA                 TTTACGGCGTCTTTA  51 231
ISU55_RS13275 2922958 .. 2922969 +  -4.4  -2.73124   TAGCCAATGAGAAGA                CGAT GCTG ATCG                 ATTTACGCAGTGACA  45 56
        ltaE 2923958 .. 2923972 +  -2.8  -3.14132   GCTGTGGCGTGAATT               TATTGC CGA GCAACA               TTCATGACACCACAA  44 4
ISU55_RS13285 2925502 .. 2925520 +  -4.6  -3.54424   CGGAAGAATGGCATC             TTATTTGC TCA GCGAATAG             TTTCAGGCGCTAGCA  55 61
ISU55_RS13290 2926570 .. 2926584 +  -3.6  -2.85459   CGGTAAGTTTCGCGG               CTAATG GGT TATTAG               GTTATCTTGTAACTC  45 22
ISU55_RS13295 2927319 .. 2927334 +  -2.5  -3.44848   ACAGACAACCGTAGT              GGTCA ACATAC TGGCC               TCTTTGATAGGAAGA  48 99
ISU55_RS13300 2928006 .. 2928034 +  -8.8  -3.89354   GGCCACACATCTTTC        GTACCGGGTTCC TTCCC GTGGCCCGGTAC        TTATTGATTTACAAA  78 56
        artP 2928988 .. 2929000 +  -2.7   -3.2632   CTTTTGCCAGCTATC                TGTCA CAT TGATA                TCTATTTGGGAATTT  46 15
        artJ NONE
        artQ NONE
        artM NONE
ISU55_RS13325 2931680 .. 2931690 +  -3.2  -3.61398   CATAATTGTGATGGC                 GCTT CGT GAGC                 TTATTCACCGACAAA  49 394
ISU55_RS13380 2940604 .. 2940625 +  -5.1  -2.56571   GCACAGGCGATAGCT           TCAGCATTG ATTT CAATGCCGG            TCAATTGAGTCTCTG  47 486
ISU55_RS13425 2948544 .. 2948560 + -12.3  -4.70887   GCATTTATCCGATAA              GGGTGTC CAA GACACCC              TTTCTTTATTGCTGG 100 66
ISU55_RS13430 2950723 .. 2950744 +  -2.1  -3.17392   ATGTCCCCATATTGA           GGAGCCCGG TAGT CCCGCCTTC            TTAGGTTCAAGACTA  43 147
ISU55_RS13435 NONE
        ybjG 2952380 .. 2952404 + -15.1  -2.91264   GTATTCGCTTCACAC          TTGCCGGTTAG TCT CTGACCGGCAA          TCTCTCCATGCGCCC 100 51
ISU55_RS13445 2953424 .. 2953451 + -11.4  -4.36554   ATTTTGTCAGTAGTC        TAAGCCCGGT CCACAATT ACCGGGCTTA         TTTATTATCGTACTG 100 166
        deoR 2954437 .. 2954450 +  -3.9  -4.83615   CGCTATGTTGGCAAA               TAATC CATA GATTA                TTTTTATACAGAATC  70 185
ISU55_RS13455 2956717 .. 2956744 + -14.2  -4.74161   TTTGATTAACCGCTC        CAGGCTGGCC ACTTCCAC GGCCAGCCTG         TTATTTTTCTTCTTT 100 64
ISU55_RS13485 2963622 .. 2963663 +  -4.3  -4.14615   TAGAAGGCCCATGAT TTTACTCGCACGGTTATCG ATAT CGGTGACCGGGCATGGAAA  TTTGTGCTGTTTTCT  61 82
ISU55_RS13490 2964333 .. 2964344 +  -4.4  -4.43307   GATTGCGATTGGTTT                GAGT TAAT ACTC                 TTCTTTTATTCCAAA  66 19
ISU55_RS13525 2974810 .. 2974833 + -13.2  -3.75332   CTAAAACAAACCGTT          TAAGGGCCGT ATCC GCGGCCCTTA           TTTCCCTTCACCGCT 100 89
         nfo 2976086 .. 2976108 +  -9.8  -2.73635   ATGGTTTGGCCATTA           GCGCGGGTGA TCG TCATCAGCGC           CTTTGCCCCGATTTG  65 344
ISU55_RS13575 2986652 .. 2986675 +  -3.1  -3.53298   AATGGGCGCGGCGAT          GGCGTAGAGC AAGTA GCTCGA-GCC          TTGGTTTGAGGTGAT  49 345
ISU55_RS13610 NONE
ISU55_RS13615 NONE
ISU55_RS13620 2997564 .. 2997575 +  -4.4  -3.58305   ACGCCTCTTCACGGG                TGTG ATGA CACA                 TTTCCCGCATTGCTT  54 150
         mtr 2999357 .. 2999369 +  -6.2  -2.95896   TATTTCAGCCTTGTT                CGGC CTATT GCCG                GTTTATCAATAGTGC  56 1
        yeiP 3000141 .. 3000171 +   -14  -3.69482   CTATTGGGTCTCTCT       ACGTTAAGAGCCGG AAA CCGGCCCTTAACGG       TTATCTCTTCACTGA 100 109
ISU55_RS13645 3003457 .. 3003489 + -15.1  -2.65161   GCTTAAGACACACGA      CGATGAGCTGAAT CAAGGCT ATTCAGCTCATCG      GTATTGTTGGCGTTT 100 35
ISU55_RS13655 NONE
ISU55_RS13660 3007202 .. 3007217 +  -5.4  -4.25681   GCTTTGGATAAAGAA              TGTGCG TTCA TGCACA               TTTATTCAGTTAAAT  68 342
        mepS 3007958 .. 3007974 +  -8.7   -5.4833   AACCAAACGTTGAAA              CGCTGTT TAT GACAGCG              TTTTTTATTGGCTCA 100 72
ISU55_RS13670 3010112 .. 3010127 +  -4.8  -3.50447   TGTAAGCTGGTAATT              TCATTT GAGA AAATGA               TTATCTGCAGCTTCG  55 58
ISU55_RS13675 NONE
ISU55_RS13680 NONE
ISU55_RS13685 NONE
        yejF 3016156 .. 3016166 +  -6.8  -3.08471   TACCAAAAACACCAC                 CGTG ACT CACG                 TTAACTACAGTTATA  59 480
ISU55_RS13710 3021359 .. 3021370 +  -7.2  -3.05463   AGGGGCGTTTTCGGC                GGGC CGAT GCCC                 TTGCCTGAGCCGCAT  61 6
        rplY 3021864 .. 3021882 +   -16   -4.8048   CGCCGAAATAAATAT             CCTCCGGC ATA GCCGGAGG             TTTTTCATATGCGCC 100 65
ISU55_RS13730 NONE
ISU55_RS13735 NONE
ISU55_RS13740 3026044 .. 3026077 + -13.3  -3.91144   GCCGACCAAATACCT     CAACAAAACCAATCC ATTC GGGTTGGTTTTGTCG      TTTGTGGAGTGTGGC 100 33
ISU55_RS13745 3026572 .. 3026607 + -12.1    -3.317   CACATGCGAGGTTTT    TATGTTGGTTCAGTT AGTTCA ATCTGAACCAACATA     CTTTTGCTTATATAT  89 128
ISU55_RS13750 NONE
ISU55_RS13755 3028476 .. 3028503 +  -7.2  -2.94637   GCTAATGTCCAGTAG        TGATTATTCAGA ATAA TATGAATAATCA         ATTTAATATCTCTAT  61 26
ISU55_RS13765 3029740 .. 3029753 +  -4.5  -4.84359   AACGCGCCATTGTAC               CGGTG CCAT CATCG                TTTTTATCGACATAA  74 228
ISU55_RS13880 3049873 .. 3049892 +    -3  -2.96444   TCTGCCACCCACAAA            TACTGT-AT ATT ATCACAGTA            CTTATTGTTCAGGAA  44 190
ISU55_RS13885 3050233 .. 3050243 +  -2.6  -5.66989   TCAATGAGAAATTAA                 TTTT TTT AAAA                 TTTTTTTAATCTTTA  84 102
        ycoA 3051482 .. 3051493 +  -4.4  -3.53012   TTTACTCATATTTTT                GCAT CTTA ATGC                 TTTCAACCAAAACCA  52 244
ISU55_RS13895 3053702 .. 3053731 +  -5.1  -3.82378   CGGGATCGTCACCGG       TTGGTGTAATTTT TGAA ACAATTGCACCGA        TTGTTGTGGATCCAT  61 255
ISU55_RS13905 3056502 .. 3056524 + -11.2  -4.93968   GGTCGTGACCACAAA           CCGCACCGGT CCC GCCAGTGCGG           TTTTTGCTTCTCCCT 100 50
        ampH 3058073 .. 3058097 +  -7.2  -4.90266   AGAGAAAAGCAAAAA          CCCGTTATCT TATTC AGATAACAGG          TTTTTAATTGGTGCC  85 180
ISU55_RS13935 NONE
        rcsD NONE
ISU55_RS13945 NONE
        rcsB 3066136 .. 3066162 + -15.2  -3.83844   CCGCTCGACTCTCAA         GCCCAGTTTTGC TCT GCAATACTGGGC         TTATTAATTAATGAA 100 49
ISU55_RS13965 3072928 .. 3072949 + -10.9  -3.27786   CGTAGAACCCACTGG           GAGCAGG-GC TAA GCACCTGCTC           TTCCTGGCTTTTCCC  81 47
        nrdA 3075701 .. 3075715 +  -2.8   -3.0353   TAGTTTTTACCCCCG               GTTATC CAT GATGGC               GTTATTTATGCCACG  43 38
        nrdB NONE
ISU55_RS13980 NONE
         eco 3078167 .. 3078178 +  -5.8  -2.91383   CACCGCCGACCAGTG                GTGC TCCC GCAC                 TCTGTAACTGCCAGT  52 406
        tyrP 3080882 .. 3080909 +   -15  -4.18018   CGTAAGCAATAATAA        GGGCGCATATCCT GAT AGGA-ATGCGCCC        TTTTCCGTCAGCCCA 100 43
ISU55_RS14005 3083485 .. 3083527 +  -6.5  -4.93318   TCAGCCCCTTTGAAC TGCACC-CCAAATGTTGG ATAACCCC CTGACATTTGGAGGTGTA TTTTTATGGCTTATC  84 47
       ompF2 3087160 .. 3087177 + -12.7   -5.0133   GAATGTATTTATTAT             GCCGGGA TTAT TCCCGGC              TTTTTTACGCCACTC 100 89
        yedA NONE
ISU55_RS14025 3088745 .. 3088768 +  -3.1  -4.68908   GTTATCCCCTTTTAG          CTGGCAGTT TCTTTT GACTGACAG           TTTCTTTTGACTGGC  65 44
        sseA 3099021 .. 3099035 +  -7.1  -2.63596   CCGCACCATCCAGCG               GCCAC CAAGC GTGGC               TGGTGTAACATAACC  52 321
ISU55_RS14135 3114373 .. 3114383 +  -6.8  -4.13995   TATTGGCAAAATCAC                 GGCA TTC TGCC                 TTTAATTTATCAAGC  71 128
         dld 3116825 .. 3116854 + -12.3  -3.35996   CAATTAGTCACTAAA       GCGGAATTTGC CTCTGCTA GCAAATTCCGC        TTCTCAGTCGCGATG  95 93
ISU55_RS14155 3118567 .. 3118590 +  -3.8  -3.57561   ATCGCCCTGCTTTTC          CAACTGCACA TATT TTTGCAGTAG           TTTGACCACTTCCAG  52 261
        cecR NONE
        hlyD NONE
ISU55_RS14235 NONE
ISU55_RS14240 NONE
ISU55_RS14245 3134970 .. 3134989 +  -7.9   -2.9175   TTGAGTACATAACCT            CTCAAGC CGGGAA GCTTGAG             TGTGATTGCGGTATG  57 263
ISU55_RS14260 3136810 .. 3136843 +  -2.5  -4.72272   CGACTGATTATGCCT     GGGTAT-CGGACCA GACCGGA TAGTCTGTATACCC     TTTTTCATCCCCGCC  64 34
ISU55_RS14280 3142266 .. 3142294 + -11.9  -3.49102   GATAAAATAGAAACT        CCCCTGATTAA CATTTGA TTAATCAGGGG        TTATCTGGAGAGTCT  91 36
ISU55_RS14305 3146904 .. 3146918 +  -3.4   -4.3739   TCATTAGACACGGCG               ACGGCG ACA CGCTGC               TTTTCTACCCGCCTA  61 424
        betI NONE
        betB NONE
        betA 3154063 .. 3154081 +   -16   -4.8048   AGAAAAAATAAATAT             CCTCCGGC ATA GCCGGAGG             TTTTTCATATGCGCC 100 155
        yvcK 3159720 .. 3159732 +  -4.9  -3.22678   AGCCCATCCCAGCCA                TAGTT TTC AACTA                ATTTTGTCAACAATT  50 325
ISU55_RS14380 3164199 .. 3164211 +  -5.5  -2.74523   CGCGGTTATCATCCG                GGTCA ATG TGGCC                TGATATTCGGCCTGC  48 321
        bioA 3169151 .. 3169161 +  -2.4  -4.59109   CACCGTTTAAGGTAA                 CGGC ATC GCGG                 TTTTTCCGCCGTCTG  63 52
ISU55_RS14415 3171691 .. 3171706 +  -4.6  -2.79183   AATATTACGAATACT              GCTGCT GTGC GGCGGC               TGTAATGCCAGTGAG  45 291
        modE NONE
        modF 3177205 .. 3177219 +  -2.8  -3.54408   TATCAGTGCTGGTGG               CCAAGT GTA AATTGG               TTGATTTAGCTCAAA  48 141
ISU55_RS14450 3178338 .. 3178358 +  -3.4  -3.09803   ATTTGTCTATGCTCA           CAG-AATAC CCCT GTATTTCTG            TATTCAGTGGGATTA  46 239
        galE NONE
        galT NONE
        galK NONE
ISU55_RS14470 NONE
        galM 3182985 .. 3183011 +  -4.3  -4.13014   TAACTGCATCTGTCA        GGCGG-CCGTAC TGAC GTTCTGCCCGCC         TTTTAGACCTCTGAC  61 237
ISU55_RS14480 3183566 .. 3183580 +  -5.8  -3.20326   GATCACGCAATATAA               TGATAA TAA TTATCA               TTGAATGTGTATTTA  55 190
        gpmA 3184528 .. 3184551 +  -7.5   -5.4505   AACACAGTAAAAAAA          CCCCGTACAT GAATA ATGT-CGGGG          TTTTTTATTGACGGC  95 53
        zitB 3187181 .. 3187191 +  -5.4  -3.58329   GTAAACGAAACCGAA                 TCAG GAA CTGA                 TTTGAACCGTATTTA  59 85
ISU55_RS14620 3211512 .. 3211528 +  -9.4  -4.19238   TTGTTAGCAATTTGA              GGCACC GTTGA GGTGCC              TTTTAACGTTAGAGC  85 98
        nadK 3213164 .. 3213175 +  -4.4  -3.05844   TACTGTATATAAAAC                CAGT CTAT ACTG                 TGTTCAAATACAGAC  47 59
        recN 3214878 .. 3214896 +  -2.5  -3.46141   ATTGCTTGCTGCATA             GAAAAGA TTAAC TTTTTTC             CTTTTTGGTGGTCAT  48 25
        bamE 3215464 .. 3215486 +  -4.1   -5.1101   GAGTGACAACAAAAA           ATAAGGCGC TGATT GTGCCTTAC           TTTTTTGCCTGCTCA  78 156
        smpB 3216851 .. 3216865 +  -6.4  -3.42699   AAGTAACTGGCATCG               CAGGAC ATA GTTCTG               TTATACTAGCTGAGT  61 39
        ssrA 3217296 .. 3217322 + -12.2  -5.24129   GGTGAAGTACGGAAA         GCCCGCATCCCT TCT AGGTTTGCGGGC         TTTTTTGTGCCCAGA 100 72
ISU55_RS14665 3218004 .. 3218036 + -11.3  -4.18367   CCTTATAGGCGCATA      TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA      TTTGTGTCTGTAGTA 100 99
ISU55_RS14670 NONE
ISU55_RS14675 NONE
ISU55_RS14680 3222386 .. 3222428 +  -7.1  -4.57569   CAGTTGTTTTAGCCG GGGCGTTGCATGCAAAT TCATGCACT ATATGCATGCAGTGCTC TTTTTGGCAGGCTAG  78 170
ISU55_RS14690 NONE
ISU55_RS14695 NONE
ISU55_RS14700 NONE
ISU55_RS14705 NONE
ISU55_RS14710 3227499 .. 3227510 +  -4.4  -4.88228   CCGTTGCAGATACCA                CACT AAGC AGTG                 TTTTTAGTGTTGGAT  74 427
ISU55_RS14730 NONE
ISU55_RS14735 NONE
ISU55_RS14745 3232598 .. 3232624 + -15.3  -3.52113   AGCAGAAACGACAAA         GCCCTGAGTTA TTACT TAACTCAGGGC         TTCTAAATTTTGGCG 100 45
        rnhA 3234320 .. 3234344 + -12.2  -2.96444   ATCCCAACGCAGGCA          GGTGGGTACT GATAA AGTGCCCACC          GTTCTTATTGAAGGG  76 223
        gloB NONE
        mltD 3237178 .. 3237193 +    -9  -5.37345   AATCACTGTCAAAAA              GCACCT TTCG AGGTGC               TTTTTTATGGTTGGA 100 47
        metN NONE
        metI NONE
ISU55_RS14835 3249126 .. 3249149 + -16.8  -3.97674   TATTGAATATATCGA          CAAGACGGGC TATA GCCCGTCTTG           TTATTTGAATAATAG 100 58
        rcsF NONE
        tsaA NONE
        proS 3252220 .. 3252255 +  -7.7  -4.23999   GGGTATTTTACTGAT   GAAGCCGC-CGG-AG AACTTGAA CTACCGTGCGGCTTC    TTATTTTAGCTATGG  76 101
ISU55_RS14870 NONE
         rof 3254717 .. 3254752 +   -17   -4.1043   GTTTCCACTTCCTTG    TGAAAAACGGGTCGCT GAAG AGCGGCCCGTTTTGCA     TTTATCCTATTTACA 100 40
         map 3278677 .. 3278691 + -12.8  -5.26316   GAGTAATAATGACAA               GCCGGC ACC GCCGGC               TTTTTTATGGGCTGC 100 35
        glnD 3281407 .. 3281418 +    -3  -4.81685   CAAACGATAAACTGT                GATA CAAA TATC                 TTTTTAGTAATTAAT  68 24
        dapD 3282417 .. 3282437 +  -8.3  -5.53288   GACTAAGATTAAGAG            TAGCGGG CTAACCA CCCGCTA            TTTTTTTGCCTTACG 100 35
ISU55_RS14995 3283044 .. 3283058 +  -4.2  -2.97245   CATTGTTCCACCCAT               GGCG CAGATAT CGCC               TCTGGTTCTGAGTGC  47 149
        queF 3287523 .. 3287540 +  -3.3  -3.04461   TTGGCACGGCAATAA             ATGCGCG CCTG TGCGCAA              TATTACCGCTCACTG  44 26
ISU55_RS15030 3289261 .. 3289282 +  -7.3  -3.05463   TGCCCAATATTACTC           GGGCTTAAT GACG ATTCAGCCC            TTACATAAAACAGGT  61 247
         xni 3290259 .. 3290274 + -11.8  -3.16154   TTGTCAATAACCTCA              GGGGCC AACA GGCCCC               TTAAATATGATGTTA  86 230
        csdA NONE
        csdE 3295606 .. 3295628 +    -2  -3.18657   CTAGCTTACCTTTGC           TGTTTTTCAC CAC GTTAAAATCA           CTTTTCAGTCTTTCG  44 306
ISU55_RS15080 NONE
ISU55_RS15085 3298026 .. 3298039 +  -8.1  -6.02919   GATATCATCATTAGA               CACCC TATC GGGTG                TTTTTTTGTTTCTGG 100 56
        argA 3301168 .. 3301189 + -12.3  -2.79581   ATTTGAAACAGATAA           CTCAGGGCG CTTA TGCCCTGAG            ATTATTGGCGATTTA  89 157
ISU55_RS15115 NONE
ISU55_RS15120 3311228 .. 3311241 +  -4.5  -3.20832   AACCGCTCAACCGCA               GGTGC CAAT GCATC                ATTTTCAATTTCAAG  51 254
        mutH NONE
ISU55_RS15180 3325232 .. 3325261 + -16.5  -3.02511   CGGGGTTTGTCAGCA       TTCTGAAGGCCGC TGAT GCGGCCTTCAGGG        TATTGACAAAGTGCC 100 243
ISU55_RS15190 3325943 .. 3325959 + -10.9  -3.59979   TGTCAGCAGTCTGAA              GGATCTC CTT GAGATCC              TTTCAGATGACAGAC  84 14
        galR NONE
ISU55_RS15220 NONE
ISU55_RS15235 NONE
ISU55_RS15240 3340007 .. 3340037 +  -9.1  -4.84359   CAATAGCAGCAATCG       TGCTCTCCTTTGC TAATC GTAGAGGAGAGTA       TTTTTCTACAGGTAA  91 43
ISU55_RS15335 3357259 .. 3357278 +  -3.6   -4.4767   TTTCGGTTAATAAAT            TAACACCT TTCG ATGTGTTA             TTTTGTGATCCATCG  65 400
ISU55_RS15340 3358467 .. 3358478 +  -2.2  -2.76261   CTTTTTACTTAAAGC                GGCA CTGA TGTC                 ATTTGCAGCTTAAAA  41 55
        yapM 3360719 .. 3360732 +  -5.3  -3.43437   GCTATATCGGTCTGA               GTGTT TCTA AACAC                TTCTAAAATTTTGTG  57 6
ISU55_RS15350 3363967 .. 3363992 + -14.7  -3.78934   CATGATTAAAACATG         ACTCAGGGCGC TTAG GCGCCCTGAGG          TTATTGTGCCCAGAA 100 71
        tnpA 3366638 .. 3366658 + -12.5   -3.6761   AGGCGCATATGAAAA            ACCTCCGGC TAT GCCGGAGGA            TATTTATTGACAAAG 100 105
ISU55_RS15375 3370184 .. 3370225 +  -6.9   -2.9415   AAGAGAAATAACACC TTGACTCCATAGT-GACATT ATT AATGTTAATTGTGGAGTTAA TGTATGCATCCTTTA  58 30
        kbaZ NONE
ISU55_RS15385 NONE
ISU55_RS15390 NONE
ISU55_RS15395 NONE
ISU55_RS15400 3374935 .. 3374947 +  -6.9  -3.68351   ACCGTTATCGCCATC                GCCGC ATC GTGGC                TTTGCATGATGCGGC  65 40
ISU55_RS15405 NONE
        nagA 3376630 .. 3376650 +  -4.5  -2.55015   AGTGCCGTGCTGCTC            ACGGCCGGG ATC CTCTGCCGA            TCGCTTCACTGACAT  47 40
        kduD NONE
ISU55_RS15420 3378713 .. 3378732 + -12.2  -5.24531   ATTTTGTTGCACTGG            CGCACATC ACCT GATGTGCG             TTTTTTATAGGCGAT 100 98
ISU55_RS15425 NONE
ISU55_RS15430 3381755 .. 3381801 +  -2.9  -3.07431   CTCGTGCGGTGTAAC GGGGAGATAAGGTGGAGC-GAG TGTT CTTAGCCCCCTCTTTTATCCCC TCTTACCCCTCTTTT  44 42
ISU55_RS15435 3383363 .. 3383377 +  -2.8  -4.12724   ACTGCGTTTACTTTC               GATGTG ATG CAAATC               TCTTTTATTTGATTT  57 40
ISU55_RS15440 NONE
ISU55_RS15445 3385039 .. 3385065 + -13.1  -3.05844   ATAGCCAGTACCGTT         GATGAACCGCA TGGTC TGCGGTTCGTC         TCTTCGACTCCCCAA  95 151
ISU55_RS15455 3388049 .. 3388061 +  -4.8  -3.01712   ATTAACCCAGCAGCG                GCAC TGCCT GTGC                TGTTGCCAGAAAAAA  50 137
ISU55_RS15460 3390676 .. 3390697 + -15.9  -4.96501   TTGTCAGCAGTCTGA           CGGGCTTCC TGAT GGAAGCCCG            TTTATTTTTGTACGG 100 238
ISU55_RS15470 3393623 .. 3393648 + -16.3  -4.73108   TCGGTTATTCTTCTA         TGCTCACTACC CTTA GGTAGTGAGCA          TTTTAGTTTTATACC 100 204
ISU55_RS15505 3402799 .. 3402814 +  -4.7  -3.14344   CCCTTCAATCCTCTT              CTGAC CATGAT GTCAG               TTCCTCAGCCACATC  51 232
ISU55_RS15510 NONE
ISU55_RS15515 3405935 .. 3405945 +  -6.8  -3.93673   AGAGATACAAATGGG                 TCGG GAA CCGA                 TTTGTACAGTATTTA  69 245
ISU55_RS15520 3407172 .. 3407199 + -12.7  -3.57792   ATGATCGCTATCGCC        CCCGGCAGCGG CAAAAT CTGCTGTCGGG         TTTGAGGGTAAATCC 100 46
ISU55_RS15525 3408453 .. 3408463 +  -2.6  -3.45536   TGGCATTATGAACAG                 TATT TGA AATA                 TTCTCGATTGCTTCT  48 30
ISU55_RS15530 3409878 .. 3409891 +  -3.9  -5.21709   CCCAGTTCAACATTT               TGATT TAAA AATCA                TTTTTTGATATCCCC  77 222
ISU55_RS15535 NONE
ISU55_RS15540 3411410 .. 3411423 +  -4.5  -4.37886   CCCACTGAGCACTTG               CC-CGC CAT GCGTGG               TTTTATCACCAATAC  66 330
ISU55_RS15590 NONE
ISU55_RS15595 NONE
ISU55_RS15600 3421987 .. 3422000 +  -3.1  -5.18866   TGACCTAAAACGACA               GGAAT AAAG GTTCC                TTTTATTTATTTGCC  75 106
ISU55_RS15605 3422501 .. 3422514 +  -5.2  -5.00616   GCCTTTCTCTTTCCA               CGGC ATATAA GCCG                TTTTTTGCACCACAA  79 238
ISU55_RS15620 3425436 .. 3425470 + -12.4  -3.04248   ATACAAAGATAAAAA     CTGACTGAATAGTT TACTAAT AACTGTTCAGTCAG     TATTCAGAGGTGTTC  93 97
ISU55_RS15645 3428107 .. 3428122 +    -9   -3.5936   CTCTAAATACAAAAA              GGCATC GTGA GATGCC               TTTAAAAAGTTTGGA  75 42
        fldB 3436670 .. 3436698 +  -9.7   -3.8766   TACATCAGAGCTCAA        TTTAACGGGCA CCCGATA TGCCCGTTAAG        TTTAGTCTAGTCTAG  84 61
        ygfZ 3442441 .. 3442468 + -18.6  -5.23292   TAAAGAGTTCTACTC        TACAGAGACCGG TTAA CCGGTCTCTGTA         TTTTGTTTTATATCA 100 41
ISU55_RS15750 3449458 .. 3449505 +  -3.4  -2.89564   GGCCAGTATTTATTC TCCAGTACACCCGCCACCGGG AATACCG CCAGTTCGCGGCTGTA-TGGA TGTGTCCACTCACCA  42 90
        zapA NONE
        ssrS 3460357 .. 3460369 +  -3.3   -2.6933   GGGTTATCGACTATA                TCCTG ATA CAGGC                AGTTTTTATGCCGCA  42 131
ISU55_RS15800 3461121 .. 3461132 +    -3  -3.58329   GGCGCGGCTCGAGCC                TACA TGGA TGTA                 TTTACGGCGTCTTTA  51 173
ISU55_RS15805 3461284 .. 3461294 +  -6.8  -4.63542   GGAATGGCCTTCATC                 GCCT GCA AGGC                 TTTTTCCGCATTATC  79 84
ISU55_RS15820 3464687 .. 3464719 +  -4.9  -4.64676   GACTCGTTTATTGGG      CAGTAGCTGTTTA TGTTTAC TGAGCAGCAACTG      TTTTATTGGCAGTAG  71 20
ISU55_RS15865 NONE
ISU55_RS15870 3474210 .. 3474228 +   -16  -4.36914   GAAAGCTTTACTGAA             CCCCCAGC CTA GCTGGGGG             TTTTCTGGGCACAAA 100 404
ISU55_RS15885 3477785 .. 3477796 +    -3  -3.58329   GGCGCGGCTCGAGCC                TACA TGGA TGTA                 TTTACGGCGTCTTTA  51 168
ISU55_RS15890 3478362 .. 3478381 +  -6.4  -3.77196   TCGCGCCGAAAAAAA            GGACAAAC CTGA GTTTGCCC             TTTAATCGATACTGA  65 489
        metK 3482798 .. 3482828 + -13.3  -4.62441   TAAAACGATGAAGAA       CCACCCTGTAAGC AACAC GCTGGCAGGGTGG       TTTATTTGTATGCAC 100 71
ISU55_RS15910 NONE
        endA 3484451 .. 3484485 +  -2.8  -4.54727   TTATTTATTTTGCGT     TTATTTCGCGCGGT ACTCATC ACCGCACGGTATGA     TTTTCGTTTCAGGAC  61 214
        rsmE 3485238 .. 3485250 +  -4.8  -3.57144   TGCGGTTTGGCGATC                TGGG ATAAC CCCA                TTTCCCACTAGGAGA  55 18
        gshB 3486240 .. 3486272 +    -7   -2.7242   GCCTAATACATAAAA     CGGGGTGTGGTGTTT TTCT AAGCGCTGC-CCCCG      TGACTTTATCCTCAT  56 35
ISU55_RS15930 NONE
        ruvX 3487469 .. 3487483 +  -5.7  -5.59564   GTTTAAAATATTGCA               CACCT CTTGC AGGTG               TTTTTTTACATTTAT  95 163
        aguB NONE
        aguA 3489539 .. 3489566 +   -15  -4.20783   AAATAAGCCGCCTGC        TTGACCCGGATC ATCC GATCCGGGTTAA         TTTATTGCATCACCT 100 50
ISU55_RS15955 3491443 .. 3491461 +  -8.8   -3.1506   CCGCCATTTTTGGTG             CCCGCGTT TAT AACGCGGA             TTAATCACGGCATTT  69 3
ISU55_RS15960 3492567 .. 3492581 +  -4.9  -3.56568   GAAACGAATGACAAA               TCGGC AGGGA GCCGG               TTTGAACGCTGCTTG  55 173
ISU55_RS15965 3493256 .. 3493267 +  -2.2  -2.62184   GCGATGTGGGTCATG                CTGT GAGT GCAG                 TCCTCTCCACCGAAA  40 20
ISU55_RS15970 NONE
ISU55_RS15975 3494224 .. 3494234 +  -2.4  -2.78712   AAATTGATGCTGGAT                 GCGC TGC GCGA                 TGCTTAAATTACCCC  41 8
        hemW 3495500 .. 3495527 +  -9.8  -3.14961   CAGTATGACTGGTGT        CTCTGAGGGCAG AAAC CTGCCCTCAGCC         TCTCTTCCTGCTAAT  74 161
        mutY 3509814 .. 3509827 +  -2.3   -3.6215   CAAGCGAATGGCAAA               TCGGC CTGT GCCAA                TTTGAACTGCATTCA  49 74
ISU55_RS16025 3510219 .. 3510243 +  -9.3    -4.015   CCGAGTAAGTAACCA         CA-CGGGGCC AATTAA GGCCCCGCTG          TTATTTCCTAAATAG  83 29
        mltC 3511465 .. 3511477 +  -5.5  -3.18912   ACAGAAGAACTATCG                CCGCT ATT AGTGG                TTAATAAGTAAATAG  53 16
ISU55_RS16035 3512902 .. 3512914 +  -3.4  -3.17763   CATGCTATCCACGTT                CATG CGATC CATG                TTCATGCGATCTACG  46 53
ISU55_RS16040 3515435 .. 3515452 +    -7  -3.90588   TATTGACCCGAATAC             CTGCGA AGCGAG TCGCAG              TTTCGTTAGAGCCTA  67 449
ISU55_RS16065 3522198 .. 3522224 +  -7.2  -4.71776   TACGGGACGAAGAAA         CCGGAGGATGTC GAT GACAAACTTCGG         TTTTCTTGCGTCTTA  81 147
ISU55_RS16175 3550185 .. 3550205 +  -2.6  -4.46656   TACACCCAACTTTTT            TACCACAT TTCCT ATGTGATA            TTTTACTGTTCTGGG  62 87
ISU55_RS16185 3552941 .. 3552980 + -15.4  -5.93809   ATTGTCCCTTCCCTA  TGATAAATTTCATGCTAA TAAT TAAGCATGAAATTTATCA   TTTTTTTTATAAAAA 100 199
ISU55_RS16190 3554254 .. 3554266 +  -4.7  -3.25823   GTCACCGATGCTGGC                CGGGC AGC GCCAG                TTACTCTCCCACAGA  53 302
ISU55_RS16210 NONE
        iucC NONE
ISU55_RS16220 NONE
ISU55_RS16225 3563725 .. 3563770 +  -7.9  -4.55697   ATCACCCATCAATAA TTA-AGGGGCTTTGCGCAA AATTAAGACA TTGCGCAA-GCCCCTATAA TTTGTTTATGGCAAT  82 93
ISU55_RS16235 3567386 .. 3567396 +  -2.6  -2.74605   CGGTGAGTTTATCAA                 TAAA ACT TTTA                 TCAATTTTCAACCCG  39 445
ISU55_RS16250 NONE
ISU55_RS16255 3574647 .. 3574686 +   -15  -2.60615   TGCTGTTTTGTCATA  AAGCCCATACCCGCCGGT TAAG ACCGGTGGGTATGGGTGA   CTCTTTGGGGGCAGT 100 95
        cueP 3577461 .. 3577471 +  -3.2   -5.5208   TTCTTGTATTTTTGT                 GGGA TTT TTCC                 TTTTTTATATTATAC  82 419
        yapH 3589081 .. 3589111 + -11.3  -5.26316   CGACATGATGATCAA       CGGCGCATATT GCAGGACAG AATATGCGCCG       TTTTTTATGGGATAA 100 68
ISU55_RS16295 3596762 .. 3596787 +  -8.2  -3.08679   CAGCAACTCAATGAC         CCCCTTCGGC CTTGAC GCTGTAGGGG          TGTTAGCTGCGCGCA  67 27
        pepT 3598111 .. 3598144 + -16.1  -3.42861   TGCCTTATCTCCATG     TAGGGTACTGGCGTG TTAG CTTGCCAGTACCCTA      TTAATGTTGTGACTT 100 66
ISU55_RS16305 3601017 .. 3601034 +  -8.5  -3.25356   TTGGCTGATAGCCAT             GGTGAAT ATAT ATTCACC              TTAAGTTCGTTATCC  69 521
ISU55_RS16315 NONE
ISU55_RS16320 NONE
ISU55_RS16325 3612572 .. 3612591 + -10.8  -3.34398   AACAACTTGAACACG            CTGTGCAA CGGC TTGCACAG             TATTTACACGAGCAA  81 31
ISU55_RS16330 NONE
ISU55_RS16335 NONE
ISU55_RS16340 NONE
ISU55_RS16345 NONE
ISU55_RS16350 NONE
ISU55_RS16355 NONE
ISU55_RS16360 3626064 .. 3626075 +    -3  -3.39668   ATGCCAAGGCAGTCT                CTTA TGAT TAAG                 TTATCAGGTTTAAGC  47 15
ISU55_RS16365 3628209 .. 3628225 +  -8.7  -3.34013   AACCGGTCAGTTGTG              TACCGTC CGC GGCGGTA              TTCATTGGAACACTA  69 410
        gntP 3632717 .. 3632728 +  -4.4  -3.67724   GTTTGGCGGTGGTAC                TGCT GATC AGCA                 TGTTTGTCTAGTTTA  54 3
        yapV 3642087 .. 3642100 +  -2.5  -2.88389   GATAAAAAATTATAA               TATTT GTAT AAATA                GTATTTTACTCTTCA  42 183
        vgrG NONE
ISU55_RS16400 NONE
ISU55_RS16405 3650242 .. 3650254 +  -3.3  -2.71364   TAAAGATAATAATGG                TGGTC TAC GCCCA                TCATTGAACAAGTCG  42 116
ISU55_RS16410 3650758 .. 3650782 +  -5.1  -4.17556   GTTTTCGTTGATTTT          TTATATTTCAC AGT GTGAAAAATGA          TTTATTAAAAGTGTG  65 99
ISU55_RS16415 3651763 .. 3651784 + -10.2  -3.05596   TCATTGCCCCATAAA           TTAGGCCC ATGCAG GGGCCTAA            TTCCCTGACGGCGTA  76 147
ISU55_RS16430 3656439 .. 3656450 +  -4.4  -4.10855   GCTGAGTAACCCGTG                CTGA TTCA TCAG                 TTTTCGCACCGTTTT  61 506
ISU55_RS16445 NONE
ISU55_RS16450 3660694 .. 3660706 +  -6.3  -3.14132   GCTTGAAGAATAACG                GGTAA TGT TTACC                TTGCTGCAACACCAA  57 120
        flgA 3671833 .. 3671844 +  -2.2  -4.26344   AAGTTAAGTTTCAGG                TGGA TTGT TCCG                 TTTTAATCAGAGTGT  58 133
        flgM NONE
        flgN 3672920 .. 3672949 + -13.7  -5.67063   CCACCCAATAAAAAA       TCCGTCATAGAGA ATAT TCCCTATGACGGA        TTTTTTTATGGTCGC 100 293
ISU55_RS16565 NONE
        fliN NONE
        fliP NONE
        fliQ NONE
ISU55_RS16585 NONE
        flhB 3684416 .. 3684435 +  -7.2  -3.35706   TATTACTGTGCGTCT            TGGCAATG GTAA TATTGCCA             TTATCACCTCTGGTT  64 94
ISU55_RS16600 3687265 .. 3687300 +   -12  -4.39426   ACGGAAGAAGAGGGA    TCGCCACAGTAAGC GAGTATGA GATTACTGTGGCGA     TTTTATGGCCCTGTA 100 51
        fepB 3690425 .. 3690442 +  -4.1   -4.7254   TGCCAGCAGTCTGAA             GCGAC ACTTATTG GTCGC              TTTTTACTGACCGCT  68 189
ISU55_RS16635 NONE
ISU55_RS16640 NONE
ISU55_RS16645 NONE
ISU55_RS16650 NONE
ISU55_RS16655 NONE
ISU55_RS16660 NONE
ISU55_RS16665 NONE
ISU55_RS16670 NONE
ISU55_RS16675 NONE
ISU55_RS16680 NONE
ISU55_RS16685 NONE
ISU55_RS16690 NONE
ISU55_RS16695 3706330 .. 3706368 + -13.2  -3.09908   CCTCAAAAACCAAAG   TTGATGCAAGCGCGGTAA CAG TAACCGCGCTTGCAAAAA   ATTATTTTGCGCCGC  95 82
        metC 3709544 .. 3709579 +  -8.4  -2.54896   ATAGAGGCCACCACT    CCGTTAATGCGCTA TCAATTCT TGGCGCATTAACGC     TCCCTTACATAAAAG  63 37
ISU55_RS16715 3710418 .. 3710434 +  -3.6  -4.03978   TCCAGGTGAATAAAA              CGGCAT CTAAT ACGCCG              TTTCTATGAAGCCTT  58 56
        yqhD 3712920 .. 3712930 +  -6.8  -4.55721   GTATCTATGAAGCGG                 CGGT ATA ACCG                 TTTTATGTAAGATTT  76 18
        dkgA 3714183 .. 3714213 +  -7.7  -4.71061   TCTGACCGCTGATTT      CAGGCCAGCAATAA CCCC TTAATGCT-GCCTG       TTTTTCCCTCTGGAT  86 29
ISU55_RS16760 3722092 .. 3722109 +  -5.5  -3.26933   GCAATGAAAGAGTTT             GCCCATT CTTA AAGGGGC              TCTTAATCTTACTCT  55 137
        tolC 3730015 .. 3730049 + -10.6  -5.09895   CGTCAGCGGTTTGGC     TTCACCGGGCACAGTC ATT GGCTGCGCCCGGTTTA     TTTTTTGCCTCCCTC 100 58
ISU55_RS16805 NONE
ISU55_RS16810 3732150 .. 3732168 +    -6  -3.59979   GATAATTATAGTAAG             GGAAGG CAATGCA CCTTCC             TTTACCATACCCAAA  61 36
ISU55_RS16825 3735536 .. 3735560 +  -7.8  -2.96141   ACTTTGTCAATAACC          TCAGGGCGCC CATCA GGTGCCCTAA          ATATTTTGTATTCCA  62 305
ISU55_RS16855 3743688 .. 3743702 +  -4.2  -3.61715   AACCGCTGGATGAAC               TGCTGA TCG TCGGCG               TTATTCGAGCGAGTA  54 20
ISU55_RS16860 3745110 .. 3745128 +  -8.8  -3.58343   ACTCCCTGTTCGTTT             CCCCCTGT AAA ACAAGGGG             TTTCAGACTCCTGCC  75 44
        plsY 3747653 .. 3747675 +  -2.7   -3.6993   AAAGGAATGAAAAAA          CGCAGTGGAC TCTT GTCCA-TGAG           TATTTTGAATGACTG  50 142
        rpsU 3749490 .. 3749517 + -13.4  -3.94823   TAGTTGCATACGAAG        GCCGTGCTTTCC GAAA GGAATGCGCGGC         TTGTTCTCGTTTATG 100 99
        dnaG NONE
        rpoD 3753319 .. 3753343 +  -8.6  -5.90981   GTGAAGTAATAAAAA          TCCCGGCATA TTATT TGTGTCGGGA          TTTTTTTTCCTATAA 100 48
ISU55_RS16900 3753579 .. 3753603 + -13.7  -4.63048   CACCAAATAAAACAA          GGAGTTACGTT AAT AGCGTAACTCC          TTTGTTATTTCTGGG 100 36
ISU55_RS16905 NONE
ISU55_RS16910 3755851 .. 3755865 +  -4.9  -4.23045   CGGGCCACCGTTCGC               GCCGG TCAAT TCGGC               TTTCTTCGGTGCTTC  63 107
ISU55_RS16940 3759837 .. 3759855 +  -3.1  -2.76263   CAAGATATCGCTCAC             CAGCC GCATCATAG GGCTG             TAGTTCCCTGATACA  43 46
ISU55_RS16955 3762759 .. 3762771 +  -6.3  -3.53224   GGGTTCAATCATGTC                CTCTT CAC AAGAG                TTTACGCACGAAGTA  61 199
ISU55_RS16960 3763333 .. 3763344 +  -7.2  -2.86186   AAAACAGTCGTTCCA                GCCG CAAG CGGC                 TACTCTTCATTTTAT  59 211
ISU55_RS16995 NONE
ISU55_RS17000 NONE
        mdtN NONE
ISU55_RS17010 NONE
ISU55_RS17015 3774206 .. 3774219 +  -5.2  -2.75064   AAACAGCGTAAAATC               CGCC TGATGT GGCG                TCGTTGAGTCGCCAC  48 125
ISU55_RS17060 3787395 .. 3787411 +  -3.5  -2.74792   GTTCACCAGAGCAGA              GGATGGC ATT GCCCCCC              ATTTCGCGATGATAG  45 79
ISU55_RS17065 NONE
        yapF 3791095 .. 3791111 +  -7.2  -3.34895   TACAATAGAGGTTCA              GCGCCG CGGTA TGGCGC              TTGCTTGAGGATCCA  62 337
ISU55_RS17120 3806264 .. 3806276 +  -2.7  -2.58999   CCACCGGAAGTGAAT                GTTGT CTT ATAAC                GTTGCTCTATAAAAA  41 14
ISU55_RS17125 NONE
ISU55_RS17130 3807593 .. 3807627 +  -8.6    -5.626   TTGGTACTGTAATGT     AAAGGCAAAGCCCC CATTCAC GGCGCTTTGCCTTA     TTTTTTTGTCGCATC 100 29
ISU55_RS17135 NONE
ISU55_RS17140 NONE
ISU55_RS17145 3812064 .. 3812086 +    -7  -3.05384   CATCGGCTTATTCAA           TGGCCTGG GTAGGCA CCAGGTCA           TTGAATGACACAGCG  58 95
ISU55_RS17150 NONE
ISU55_RS17155 3815397 .. 3815411 +  -4.2  -3.38314   CAGCACCATAAATTT               CTGGTT TGA ATCCAG               TGTTTCGCAGTTGCC  52 234
        yapG 3819927 .. 3819938 +  -4.4  -3.48288   AACGCACTGGTTGGC                GTGA AATA TCAC                 TTCTAATATCCATTG  52 8
ISU55_RS17170 NONE
ISU55_RS17175 3822010 .. 3822031 +  -3.7  -4.85653   ACTACAATCTATCGA           T-CGGGGCTA CCA TAGCCCCACA           TTTATTTTGTATATA  70 145
        sstT 3823706 .. 3823731 +  -9.8  -5.60993   TTTACCTACGCAAAA         TGCCAGTCAG TTAAGT TTGACTGGCA          TTTTTTTGTGCCCAG 100 50
ISU55_RS17185 3824418 .. 3824442 +  -9.9  -4.51812   ATAGGCGCATATGAA          AAACCTCCGGC TAT GCCGGAGGATA          TTTATTGTTATCAAA 100 103
ISU55_RS17215 3832111 .. 3832140 + -15.9  -3.02381   AATGACCTACTAACA       TGAAAGCCCGGTA AATT TATCGGGCTTTCA        TCTCTCCTGTTATCC 100 78
        exuR 3833138 .. 3833175 +  -7.9  -2.93901   TTAATGATGGGTAAT   CAGGGAGGAGAAA CCGGCATTATTC TTTCTCTTCCCTG    TGTAATTACTCCGCT  62 48
ISU55_RS17225 3834100 .. 3834110 +    -4  -2.90065   AAAAGCCATCAGATC                 TCTT CGC AAGA                 TCGTGTTTATAAACT  46 228
ISU55_RS17230 NONE
        mzrA 3835478 .. 3835490 +  -2.7  -3.09491   TGCTGTAAAAGGACA                CAATA CAA TGTTG                TTACGTCGATCTCTC  44 244
ISU55_RS17240 3835860 .. 3835871 +  -4.4  -3.10908   GCACAATCTCAGCAA                CACT AATC AGTG                 TTAAATGCTGAGTTT  49 20
ISU55_RS17245 NONE
ISU55_RS17250 NONE
ISU55_RS17255 3837025 .. 3837038 +  -5.3  -3.58505   TCCCCACATCCTTAC               CCTAT AGGT ATAGG                TCTTATTGTTCATCA  59 46
ISU55_RS17260 3837747 .. 3837769 +  -8.5  -5.40072   AGTTAATATCAGCGA           TACCCTATC CATCC GGTAGGGTA           TTTTTTTAAGGGGGA 100 69
ISU55_RS17270 NONE
ISU55_RS17275 3839943 .. 3839961 +   -16  -4.36914   GAAAGCTTTACTGAA             CCCCCAGC CTA GCTGGGGG             TTTTCTGGGCACAAA 100 185
ISU55_RS17300 3844804 .. 3844814 +  -6.8  -3.69092   AGACGGTGCTTTGAA                 TGCC AAA GGCA                 TTTCAGCTTCATCTT  64 225
ISU55_RS17390 3864371 .. 3864388 + -11.3  -3.47322   TGTCAGCAATCAAAA             TCAGGGC GGGT GCCCTGA              TTCGTTATAGTGAAC  89 124
ISU55_RS17425 3873728 .. 3873743 + -11.8  -6.22802   TCAAGATTAACAAGC              CCGCGC AAAT GCGCGG               TTTTTTTTTGTGCCC 100 286
ISU55_RS17430 3874428 .. 3874460 + -11.3   -4.4009   CCTTATAGGCGCATA      TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA      TTTTATCCGCTGAGC 100 99
        leuA NONE
        leuB NONE
        leuC NONE
        leuD NONE
        sgrR 3883060 .. 3883070 +  -2.6  -3.81141   TAAATACTCTCATTT                 TTTA TTG TAAA                 GTTTTTTATATGCGA  52 132
ISU55_RS17465 NONE
        thiP NONE
        thiQ NONE
ISU55_RS17485 3890588 .. 3890605 +  -4.1  -3.53031   TAGGGTTGTTTTAGA             GGTGA-CG AAG CGCTCGCC             TTCCTTTACCATAGC  52 47
        rapA 3894143 .. 3894165 + -13.5  -5.71712   TTGTCAGCAGTCTGA           TATCCGGGG CATTC CCCCGGATA           TTTTTTTGTCTGACG 100 235
ISU55_RS17585 3919384 .. 3919406 + -13.6  -3.02263   CGTATCTGACGAATA           GTGTCCATTA TCT TAATGGACAC           TATTACCCCAAATAT 100 157
        rluA 3921429 .. 3921448 +  -2.1   -3.5125   TTTGATCAAATCATA            CGCAG CCTGAATTTC CTGCG             CTTTTTGCTTCGCCA  47 359
        lptD 3924788 .. 3924801 +  -3.7  -3.07816   TACAGTGAATCTTAA               CCCGC GATA GCGGA                TTACATAAATGGAAA  48 60
        surA NONE
        pdxA NONE
        rsmA NONE
        apaG NONE
        apaH 3929230 .. 3929259 + -10.9  -2.78706   TTGTAAAGACGCTAA       TTAAAGACGCATG AGCT TATGCGTCTTTAG        ATTTCACCTATAATT  77 63
ISU55_RS17660 3934300 .. 3934319 + -13.6  -3.66908   CTACGAACGTAAAAA            GGGCGATG TTGC CATCGCCC             TTGATTTTCGCCACG 100 204
        rpsT 3947815 .. 3947844 + -14.5  -3.08344   GACATTGAGTGCTTG       TAAAAAGACCGGC TTAG GCCGGTTTTTTTA        TCTCTATCGTTTGGC 100 47
        satP 3954559 .. 3954597 +   -20  -4.55798   AGCTTATATTACACA   GCACCTTGAATATTAGAT AAA ATTTAATATTCAAGGTGC   TTTTACTTTCCACTC 100 58
ISU55_RS17740 3957284 .. 3957313 + -10.3  -4.63184   GAGAAAAAGATAAAA       GCCCATAATTTATT GAT AATAA-TTATGGGC       TTTTTAAAGTGAATT 100 47
        yaaA NONE
        arcA 3969331 .. 3969350 +  -9.3  -5.98675   ATAGAGACGGAAAGA            GCCAGCA CACAGA TGCTGGC             TTTTTTGTTTTTATA 100 51
        robA 3971055 .. 3971090 +  -6.3  -3.64703   GCTGTAATTCATCAA    GTGCTGGC-ATATC TAAATGAGC GGTATCGCCAGCAC    TTTCAATCACCCAAC  63 42
        yjjX 3972324 .. 3972352 +  -3.7  -4.17657   AGCCATTTAGCGTTT        GTTGGCTAGCAAC TGG GCTTCGAGCCAGC        TTTTCAGCTGTGGTG  60 31
ISU55_RS17825 3978217 .. 3978247 + -15.4  -4.14739   GTCAGAAGAGAAAAA       GCCCCGGAGCAG TCCAGCC CAGCTCCGGGGC       TTTTGAGGTAAATAA 100 46
ISU55_RS17830 NONE
ISU55_RS17835 NONE
ISU55_RS17840 3980994 .. 3981015 + -10.9  -4.05926   AACGTCCTTTATTTA           CCGGTTTGC GGCT GTAAACCGG            TTTCTGCCTTTATTC  90 39
ISU55_RS17870 3989179 .. 3989190 +  -7.2  -3.29511   GGGAGAAGCTTGAGA                CGCG ATTA CGCG                 TTATCACCCAGTAAC  64 132
        rsmC 4003453 .. 4003476 +  -3.1  -3.14344   ATCACAAAAGTCATG          TTCCGGTAC GCGATG GTGGCGGAA           TTGGTAGACGCGCTA  46 273
ISU55_RS17940 NONE
ISU55_RS17950 4005895 .. 4005905 +  -2.4  -3.70773   ATTGGTCAATCTAGA                 GGAC GGC GGCC                 TTATTGGGTATAGGC  49 449
ISU55_RS17960 4007923 .. 4007936 +  -6.7  -2.92425   TATATCTGTCCCTAC               TAGCC AAGA GGCTA                TGTCTCGACTTGATT  58 195
ISU55_RS17965 4008263 .. 4008276 +  -3.1  -3.84825   TGCGGAGATCGTAAA               G-CAGC AAC GCTGGC               TTTGGTATGCCTGGG  53 56
ISU55_RS18005 4019679 .. 4019691 +  -3.5  -3.09664   ATCTTTTTTGAACAC                TTTTA AAT TAAAA                ATATTTTTGTTCACT  48 74
        lsrA NONE
        lsrC NONE
        lsrD NONE
        lsrB NONE
        lsrF NONE
        lsrG 4025885 .. 4025914 +  -3.6  -3.86903   AAGATGCATCGCCCA       GGGGCTGATA ATCATGCTTC TATCGGCCTC        TCTTTTAATTCTCTG  56 170
ISU55_RS18040 4026548 .. 4026574 +  -8.6  -2.75074   TCCGATAAGGGTCAC         TGGGTGCCACCT CAG ACGCGGCACCCG         TCATGTTGAAATGAA  64 41
ISU55_RS18050 4030817 .. 4030838 + -13.1  -3.15544   TGCTAGCCCGCAGGG           TGAGCCTCA AGGA TGAGGCTCA            TTAGTCCCGATGAGC  95 243
ISU55_RS18055 NONE
ISU55_RS18060 4032123 .. 4032141 +  -2.4  -4.06055   TGAACAGTGGTTTGC             TCTCGTTG CAT TAACGACA             TTTCGTTTAAAGCCT  55 451
ISU55_RS18075 NONE
ISU55_RS18080 NONE
ISU55_RS18095 4039296 .. 4039306 +  -6.8  -4.12188   CCGCCGGAAAACAGG                 CGAG ATT CTCG                 TTTTCAGAGTAGTAA  71 135
ISU55_RS18100 4039805 .. 4039818 +  -2.4  -2.54523   GTTCAAACTAATTTA               TCGA ATTTGA TCGA                TACATTGAAATATAA  39 155
ISU55_RS18135 NONE
ISU55_RS18140 4050273 .. 4050289 +  -9.3  -3.05463   CCTTCGACCACGACA              CTGGCGC TAA GCGCCCG              TTGAATCAACGCAAT  65 502
        glnA 4056102 .. 4056119 + -11.3  -5.28826   CCGTGGAAACTTTTG             GCCCATC TTAG GATGGGC              TTTTTTCTCCACTTT 100 126
        glnL NONE
        glnG 4058738 .. 4058771 + -11.8  -2.80994   GTTCCCGCCAGATGG     TCACCCTCAAGAGCG ATAAC CGCACT-GAGGGTGA     TATCGTCAGATTACA  83 40
ISU55_RS18190 4062447 .. 4062465 +   -16   -4.8048   CCCATAAATAAATAT             CCTCCGGC ATA GCCGGAGG             TTTTTCATATGCGCC 100 178
        mobA NONE
        mobB 4071123 .. 4071134 +  -3.6  -4.02022   CACCATTTTCAAACC                GCTG GTGA CGGC                 TTTATAGTCCTTCCA  59 467
        trmA 4082343 .. 4082361 +   -11  -3.33696   CGCAGATAAAAGAAA             GGGCAACG ACA TGTTGCCC             TTAGTTGGCAAGACG  81 55
        sthA 4085214 .. 4085225 +  -5.8   -3.5394   GGGGCGATACACCAA                CGCA ATGG TGCG                 TTTAGGGACAGGTTT  59 119
ISU55_RS18295 4086953 .. 4086968 +    -9  -6.10295   ATAGGAAGTAACTTG              GTAGGC TCCG GCCTAC               TTTTTTTTCTGTTAG 100 80
ISU55_RS18300 4088474 .. 4088490 + -10.8   -4.7254   CTCAGGCGGTTCAAA              CCGGGC ACGGC GCCCGG              TTTTTAATCCCCCGT 100 44
        argE 4101785 .. 4101810 +  -4.8  -4.41494   TATGGAATTGAACGT        GGC-GAG-TGGA ATTG TCCATCTCTGCC         TTTTAGTTGAAACTA  68 163
         ppc 4104920 .. 4104948 +   -11   -4.1899   CGGGCTGACGAGCCA       GCGCGAT-GGGCA TCCC TGCCCAAGCGCGC        TTTTCGCTGGCGTCC  93 288
ISU55_RS18355 4107197 .. 4107207 +  -5.4  -2.80464   CACACTTCACTATCA                 CCAA AAT TTGG                 CTTTGGCGTTCATAC  48 469
        glpD 4110691 .. 4110720 +  -3.6   -5.0538   CAAGAAATTTAAAAA      CCCTCTTCAATCGG ATAA CCGC--GAAGAGGG       TTTTTTACGGTGGCA  73 114
ISU55_RS18405 4122736 .. 4122767 +  -8.9  -2.66249   AAACCCTATAAAAAT      TAATGCCAGAG TATAACCCAC CTCTGGCATTA       CTATTATTCCTGACA  66 99
ISU55_RS18445 4141098 .. 4141108 +  -3.2   -5.3671   ATCATCAGGGTAAGC                 GGCT TTG AGTC                 TTTTTTGCTTGTCTT  80 292
        gntT 4144436 .. 4144448 +  -9.1  -3.28791   CGACATCCACCATTT                GGGGT GTT ACCCC                TTCTCCGCGCAACCT  67 164
ISU55_RS18485 4147836 .. 4147847 +  -3.6  -4.30576   TTTGCAACAGTTACG                CGTC TGCT GGCG                 TTTTCCTCGTGAAAA  63 152
ISU55_RS18520 4157017 .. 4157049 +  -7.7  -3.13432   GACATCAACGACTTC      GCCAATAAAGTACAG CCC CGGCACTTTATGGGC      TTCCATGGTCTTGGA  59 260
        pitA 4160017 .. 4160037 + -10.4  -5.24129   GATGAGCAATAAAAA            GGCGGCCT AAATC AGGTCGCC            TTTTTTGTGCCCAGA 100 121
ISU55_RS18535 4160723 .. 4160747 +  -9.9  -4.43642   ATAGGCGCATATGAA          AAACCTCCGGC TAT GCCGGAGGATA          TTTATTAATTCTTTT 100 103
        uspA 4162295 .. 4162315 + -11.8  -4.91109   TTGAGTAACGTTAAA            CGCTCGCC TCTCC GGCGGGCG            TTTTTGTGATAGACG 100 53
        gdhA 4163870 .. 4163910 +  -6.4  -2.95586   TAAATAAAACGTTGT CCCCATATTTTTTTAAGAT GAAC GTCG-AGAAAAATATGGGG  TACTTCTTCCCTCTC  56 38
ISU55_RS18555 NONE
ISU55_RS18570 NONE
        gorA 4171039 .. 4171076 + -11.3  -3.89524   AGATGATTTCGTTAC   TATGGCCCGAACAGGCAG AGA CT-CCTGCACGGGCCATG   TTTCTGAAATACACT  95 35
ISU55_RS18580 4172382 .. 4172399 +  -3.4  -3.65529   AATCAGCCGTTTTAG             CCGTCCA TTTTC TGG-CGG             TTTCACTCAAGCTAT  52 59
ISU55_RS18590 NONE
ISU55_RS18595 4175120 .. 4175133 +  -6.7  -2.61298   ATGGTCATATAGCCC               CGACA ATAT TGTCG                CTACTTTTTAGTTTT  56 204
        yhjD NONE
ISU55_RS18625 4183075 .. 4183088 +  -5.9  -3.14132   GATCAGTGCCAGTAA               TGCCG CTGC CGGCG                TTAATGCCACCCCCA  53 110
ISU55_RS18640 4186808 .. 4186824 +  -6.7  -2.76964   TACATCATAAAAAAT              TTAAAAC ACC GTTTTAA              TCCTATTGACTCTGG  57 81
ISU55_RS18645 4188015 .. 4188053 + -12.5  -4.11692   AATAACAGACGTTAA   TGACCGATCGTTGCAGG ATAAA CCTACAGCCATCGGTCA   TTTTACGCCTGGCTA 100 65
        fabY 4214777 .. 4214796 +  -6.4  -3.72576   CTGGTACCCTTAAAA            TCACTGAC ATGA GCCAGTGA             TTTGCTGCCGGGCGA  63 45
        gltS 4219768 .. 4219794 + -10.1   -3.9749   CATCCATGTAGGCTC        GAG-CCGCGCCA TCCT TGGCGCGGACGC         TTTACTCTTCTGCCT  86 208
        ligB NONE
         rph 4230670 .. 4230686 +  -9.4  -5.75945   ATCATAAATTTATTA              GGCGAC GGATA GTCGCC              TTTTTTTTACCCGCT 100 34
        pyrE 4231503 .. 4231560 + -21.6  -3.68569   ATAACATGGGGTAAT C-CCGAATCAAGCTACGCCAAGAGGGC CGTTT GCCCTTTTTGCGTAGCTTGATTCGCTG TTCTCTCTATGTCTT 100 52
        radC 4234858 .. 4234872 +  -6.4  -3.76373   AGAGCAATATTTATT               GATCCT TTC GGGATC               TTTAGCTGTTCGGGA  65 39
        rpmB NONE
        rpmG 4235543 .. 4235558 + -11.8  -5.60689   GCGGACTAAGAAAAA              CCCGGC CTTG GCCGGG               TTTTTTATTATATAA 100 46
        mutM 4236486 .. 4236497 +  -5.8  -3.97674   CGTGATATCCCCACC                GTGG CGCG CCAC                 TTCTTTCACTAATGA  66 97
ISU55_RS18885 NONE
         tdh 4244873 .. 4244913 + -11.3   -3.3506   TAGTTTATCCCCTTC  GGGCTTGGTGTTGCA AAACTACCCGC TGCGATACCAAGCCC  TTGTCAGGATTTACG  86 38
ISU55_RS18910 4249739 .. 4249761 +  -5.7  -4.04576   CTTGTGCGGCTATTA           TATCGATAT TCCGT ATATCGGTA           TTTAGTTGTATAAGT  66 50
        grxC 4250056 .. 4250076 + -10.4  -3.68827   ACGCCCTGGATGCGC            GCGGTGGG CTAGA CCCACTGC            TTTAACTCGTCAGTG  82 0
        secB NONE
        gpsA 4251882 .. 4251904 +  -4.8  -3.32695   GAATAAGGGCATAGC           CGCTTCGG TCGTTCC CCGGAGTG           ATTTGTTTATGGGCA  53 243
        cysE NONE
         ada 4254803 .. 4254816 +  -9.5  -3.32498   CCTGTTCCTCCCGAC               GCCCG ATCT CGGGC                TTCATCTGTACGATA  70 213
        cpxP 4257454 .. 4257472 + -14.6  -5.71638   CCATCCCTGTCTTTC             GCCCTCCA TGA TGGAGGGC             TTTTTTTGCTTATTG 100 82
ISU55_RS18965 NONE
        fieF 4260559 .. 4260600 +  -2.3  -2.86177   GCAGTGAAAAATACC GCAAAATGGCTGACTTGAA TCAA TTCAGCTTGGCGTTTTTGC  TATAATATCCGATAT  41 86
        pfkA 4261724 .. 4261776 +  -9.5  -5.00138   TCGCTCATTCATCAA GCCCTCGAAAT-TGAACTGATCCCAA AAAG TTGGG--CAGTTTACATTACGAGGGC TTTTTACTTTCGGTC 100 50
ISU55_RS18980 4263037 .. 4263074 +  -8.5  -3.91897   TACCAACCGCTTTAT   CG-CCAACACCACATCGT TGT ATGTTGTGGTGTTGAACG   TTTATCGCTACCGCG  77 153
ISU55_RS19015 4270497 .. 4270518 +  -5.8   -5.1523   TTGGATATATAAAAA           CCGGCG CTTTTATTTA CGCCGG            TTTTTGTGTTGTACC  85 198
ISU55_RS19030 4273031 .. 4273057 +  -6.5  -3.63968   ATACTGCTCGCTGGT         CATATGCCCCG GTTTA CGGCGCAGATG         TTTACGCATTTCGCG  63 387
        zapB 4278682 .. 4278700 +   -16   -4.8048   GAAATAAATAAATAT             CCTCCGGC ATA GCCGGAGG             TTTTTCATATGCGCC 100 134
ISU55_RS19075 4283512 .. 4283537 + -14.1  -3.33815   GCAGTAATAAGTAAA         TATGCCAGCGT GAAA GCGCTGGCATA          TTAATTGAAAGGGAT 100 34
ISU55_RS19080 4284764 .. 4284790 +  -6.7  -2.90212   CGCAATCACAGTGGA         TAGGAGAAG AAGGGGAAC CTTCTCCTA         TCTGTGCACTAATCC  57 72
        rpmE 4293610 .. 4293624 + -12.8  -5.45652   CCCGTCAGATAAAAA               GGCGCC TTG GGCGCC               TTTTTTGTTGCCACT 100 47
ISU55_RS19140 4299296 .. 4299316 +  -6.1  -3.17051   CTCGCCAATATGAAT            TTTTCACGC ATT GCGTGTGAA            TATTAATCATCACCC  57 94
        metF 4300525 .. 4300543 +   -11  -2.73735   TGCTTTTCTACCTGA             GTCCGGTA TTC TGCCGGAC             TCATTCCGCCTGTTT  77 206
ISU55_RS19175 NONE
        malP NONE
        malQ 4312201 .. 4312214 +  -5.3  -2.73681   GCAAAGCCCGATGAG               CTTAC ATAA GTAAG                TGATTCGGGTGAGTG  50 280
        bioH 4314637 .. 4314650 +  -5.3  -3.03771   TATCCAATACGAGGT               GTTTC ATAT GAAAC                TATTGAAAAATATGG  52 188
ISU55_RS19205 4315029 .. 4315050 + -14.5  -3.78034   CGGAATCAACATATT           GAGATGCCC ATAT GGGCATCTC            TTATTGGTGTGCGTG 100 141
        greB NONE
        ompR NONE
        envZ 4324112 .. 4324126 + -11.4  -3.14564   GGATGTGAAGCCCAA               GCCACC AGC GGTGGC               TTGATGGAGGGATAA  84 7
        nudE 4331744 .. 4331767 +   -14  -5.10497   TAATTTATAAAAAAA          CCAGATGATC ATCA GATCATCTGG           TTTTTTAGATAAGTT 100 105
        pilM NONE
ISU55_RS19285 NONE
ISU55_RS19290 NONE
ISU55_RS19295 4336934 .. 4336945 +    -3  -3.11173   TAACGTTCTCACTGT                TTCA ACAA TGAA                 TTCAATGGATTGTCT  46 15
        hofQ 4338779 .. 4338807 +  -6.8  -3.51032   GGTTTCAGTTTAGGT       CCCG--CCGCTAAT TTG ATTGGCGGGGCGGG       TTATCATTAACGAAT  63 309
        aroK 4339383 .. 4339394 +  -3.6  -2.52795   TTAGCATTTTACTAA                TGCC TACG GGCG                 TAAGTTAAGAAGGTT  44 43
        aroB 4340634 .. 4340660 +    -6  -3.79419   GATATTCATAAGTAT         TATGATGTTGTA TTG TAAAACATCGTA         TCTTTTGTGCAGACA  63 149
ISU55_RS19315 4341769 .. 4341780 +  -3.6  -3.34517   ACCATTCTGATTTGT                GCGC TGAT GTGC                 TGTTTGAAACAGAGT  49 41
         dam 4342892 .. 4342904 +  -4.7  -3.14344   TTATTTGGGGTATAG                CCCGG TGT CCAGG                TTGATAAAGCCGATC  51 265
         rpe NONE
ISU55_RS19330 NONE
        trpS 4345388 .. 4345409 + -14.5  -3.16742   AACGCATCAGTAATG           TGAGGGGGA AATT TCCCCCTCA            TTAATCAGCATTAAC 100 48
ISU55_RS19360 4352643 .. 4352654 +  -5.8  -3.44848   CAGTGGGTCACGTGG                CCGT GACT ACGG                 TGTTTGGTGAAGAAA  59 126
ISU55_RS19370 4356380 .. 4356403 + -14.6  -3.16921   AATGCGCTAGCAGAA          CGTGGCAGGC GATG GCTTGCCACG           TTAATAACAATTAAT 100 48
ISU55_RS19385 NONE
ISU55_RS19390 4360651 .. 4360664 +  -3.8  -3.95435   CAATTCCGGTCGTCT               CCTG ACCGAG CAGG                TTATATTTTAACCCC  58 381
        ppiA 4362234 .. 4362249 +  -4.6  -3.14881   GTACGAGTCTTCTGG              GGGCAG CAGT CTGACC               TTAATGGCCCCATTA  51 190
ISU55_RS19405 4364046 .. 4364071 +  -6.9  -3.64103   CTTCAACCAACTGTG         TGGGTTGTCAG ACTG CTGACAAACTA          TTTGGGGTATAGATA  65 141
ISU55_RS19410 4364784 .. 4364801 +  -2.7  -5.30686   CCATGACATCATTTA             TCATTTG CTTG CGGATGA              TTTTTTATGCATATT  76 61
ISU55_RS19415 4366303 .. 4366316 +  -4.5  -3.56644   TTGTCAATAACCTCA               GAGGC GCTA GTCTC                TCTCTTTTTACGTAT  55 230
ISU55_RS19430 4369917 .. 4369940 +  -8.9  -4.56775   GTAAATGGTGAACCA          CCCATAGCC CGGTTT GGTTATGGG           TTTTTAGGCCAAAAT  93 37
ISU55_RS19435 4370595 .. 4370612 +  -2.7  -3.14132   TATTAGTTAAGCGAT             CTGCT TCCCTTCC AGCAG              TTGCTGAACCAGCGG  44 212
ISU55_RS19455 4373598 .. 4373636 + -12.1  -2.74597   AGTACATCTGTTATC   GCATAAAGGAATAAA CAATATTCT TTTATTCCTTTATGC   TGCTCTCTCTCTCGG  83 102
        tauA NONE
        tauB NONE
        tauC NONE
        tauD 4377237 .. 4377254 +  -8.3  -2.70275   ACGATTCTGGGTGAT             AGGCCGG TGTT CCGGCCC              TGATCTATGGCGTTA  63 5
        kefG NONE
        kefB NONE
ISU55_RS19505 4384268 .. 4384278 +  -2.4  -2.76162   TTATGCGGGTGAGTA                 CAGC GGG GCAG                 ATTTCCGCTACAATC  41 60
        slyD 4384931 .. 4384963 + -16.5  -2.87931   TATCTGACCCCGTCA      GCAAAAAGCCAGC CTTCATC GCTGGCTTTTTGC      TCTGTACGCGATCAC 100 41
        fkpA 4386500 .. 4386523 +  -9.6  -6.22802   ATACTCTTCTCATAA          CCGTTACGAT AATT GTCGTGACGG           TTTTTTTTTGTGCGC 100 56
ISU55_RS19525 4387427 .. 4387441 +  -2.1  -3.26947   CAAAAGTGGCGATCT              CG-TCG GGCA CGAACG               TTAATGTCCGCGTTA  45 7
        tusD NONE
        tusC 4388216 .. 4388228 +  -2.7  -2.89881   TTTAATGAGGTTTGG                GTATT CAT AATGC                TGTATACCGTCAGTC  42 36
        tusB NONE
        rpsL NONE
        rpsG NONE
        fusA NONE
         tuf 4393085 .. 4393100 + -10.4  -5.55769   ATTGATCAAACCAAA              GGGTGC CTCG GCACCC               TTTTTTATTGTGCCC 100 60
ISU55_RS19565 4393791 .. 4393811 + -12.5  -3.72374   AGGCGCATATGAAAA            ACCTCCGGC TAT GCCGGAGGA            TATTTATTGATAAAG 100 105
         bfd NONE
         bfr 4394954 .. 4394968 +  -5.6  -3.68024   TGTCACTGAACAATA               CTCCCG ATA TGGGGG               TTATATGTTGAACGA  61 334
        rpsJ 4395361 .. 4395375 +  -3.5  -2.72379   AGACGTGCAGATCAG               CCTGG GTTAA TCAGG               TCATTGAGCGATTGA  44 16
        rplC NONE
        rplD NONE
        rplW 4396968 .. 4396979 +    -3  -3.12668   AGTCGGAGGAGTAAA                CAAT GGCA ATTG                 TTAAATGTAAACCTA  46 40
        rplB NONE
        rpsS NONE
        rplV NONE
        rpsC NONE
        rplP NONE
        rpmC NONE
        rpsQ 4400042 .. 4400068 + -10.2  -5.24531   CCAACTCGAACATAA         TAAGCGGCTC TGAAAAT GGGCCGCTTA         TTTTTTCTACCCACT 100 49
        rplN NONE
        rplX NONE
        rplE NONE
        rpsN NONE
        rpsH 4402179 .. 4402189 +  -3.2  -2.60075   TGGTGGCGAGATTAT                 CTGC TAC GTAG                 CTTAATTCGGGAGGA  42 10
        rplF NONE
        rplR 4403089 .. 4403099 +  -3.2  -3.32963   ATGCTGCCCGTGAAG                 CTGG CCT TCAG                 TTCTAAGGTAGAGGT  47 9
        rpsE NONE
        rpmD NONE
        rplO NONE
        secY NONE
        rpmJ 4405763 .. 4405792 + -12.3  -4.61868   TTTCTTGCAAAGTTG       GGTTGAGCTGGCTA GAT TAGCCAGC-CAATC       TTTTGTATGTGACTG 100 56
        rpsM NONE
        rpsK 4406632 .. 4406648 +  -7.9  -4.42851   GTCCGCCGAAAAAGC              GCCGCGT ATA ACGCTGC              TTTTAGGTTTGTTGG  82 15
        rpsD 4407278 .. 4407296 + -10.4  -3.14132   ACACCTGATCGTCGA             GCTTTACT CCA AGTAAAGC             TTAGTACCAAAGAGA  77 10
        rpoA NONE
        rplQ 4408759 .. 4408772 +  -9.5  -5.40072   AAACGCGTAAAAAAA               CCGGG CTTG CCCGG                TTTTTTTACGCCCAC 100 46
        zntR 4409615 .. 4409626 +  -2.2  -3.64703   TTAAGGTATGAATTT                CTCT ACAG AGGG                 TTTAAATCGGCAGAG  49 30
ISU55_RS19725 4409954 .. 4409971 +  -3.4  -2.73681   AATACCCGCTTTTGT             GTTGCT GTTTAG GGCAAC              TCATTCCGGTAGCTC  43 81
        dprA NONE
ISU55_RS19760 4416549 .. 4416569 +  -2.5  -3.19463   GAAGTCAATGACGGT            TATTTGCAC TAG GTGCTAAGA            TTGCTGGCTAATGGC  44 14
ISU55_RS19765 NONE
        tsaC NONE
        aroE 4418851 .. 4418865 +  -7.8  -3.87075   GTTACCAATGGTACA               GCCGTG TAG CATGGC               TTTATGACCAATAGT  69 332
ISU55_RS19830 NONE
ISU55_RS19835 NONE
ISU55_RS19840 NONE
ISU55_RS19845 4436741 .. 4436759 +  -4.6  -3.97636   TGGTAATAAAAATCA             TTAGCATT ACT GATGCTGA             TTTCTGCATTCCACT  61 500
ISU55_RS19850 NONE
ISU55_RS19855 NONE
ISU55_RS19860 NONE
ISU55_RS19865 4440802 .. 4440817 +  -2.4  -3.62046   ATCAGGCATTACAGA              CTGGCC AACA GGCGGG               TTCTTCAGCCGCTCA  47 364
ISU55_RS19890 4442804 .. 4442816 +  -6.2  -2.62184   CCGGCTTGATGAATC                GGCC ATTCA GGCC                TGGTATGAGGAGCCA  54 130
ISU55_RS19900 4444150 .. 4444168 +  -6.7  -4.55287   GGCTCTCACCACTTC             GCCCTTG CCGTT TAAGGGC             TTTTCTCTGGCTAGC  76 86
        xylA 4454308 .. 4454318 +  -3.2  -3.30124   TTTACTGGGTTGACC                 GCTT ACT GAGC                 TTATACACCCTACCG  47 60
        xylB 4455913 .. 4455943 +  -9.1  -4.82901   AGTGCGAATAAACAC       CGTGCTGGGTAAT TCATT ATTACTCAGCACA       TTTTTATAGGGCCAC 100 87
ISU55_RS19980 4464693 .. 4464716 +    -6  -3.06183   GATTATGGTAGCTGA          CACAGAGCGGA TAT TCCG-TCTGGG          TTCCATCAAGATCAA  54 151
ISU55_RS19990 NONE
ISU55_RS19995 4467871 .. 4467916 +  -4.9  -3.53224   CGAAAATCAGATGAG GTGGCGGTCGCATCATTGAGGT CGATA ACCCCGA-GAT-CGACCGC-AC TTTGGCAAGCACCTG  54 513
ISU55_RS20020 4471190 .. 4471219 + -13.7   -4.7871   TAATATTGTATTTCT       TCAGCAGCCAATG AGGT TATTGGCTGCTGG        TTTTTACTGATGGTT 100 38
        malE NONE
        malF NONE
        malG 4480466 .. 4480486 +  -9.6  -5.24799   GGTACTGTGTCTTTA            GGGCGGCC TTAAT GGCCGCCA            TTTTTATGTTTATCA 100 103
        lysC 4484703 .. 4484721 +  -6.7  -3.09516   TAAACCTCAGAAAAA             TGCCTGA GATCA TCGGGCA             TTCACTGCTAACACG  59 254
ISU55_RS20080 NONE
ISU55_RS20085 4491734 .. 4491769 + -16.3   -3.0701   ATTAAACTGTAATAT    CGAAGGGGATAAACC AATCAC GGTTTATCCCCCTCG     TTAGATCAACATTAT 100 52
ISU55_RS20150 NONE
        mdtD 4511851 .. 4511861 +  -5.4  -3.08798   TAACGAAGGGAGACC                 GAAC CGC GTTC                 TATTAGCTCGGGAGT  53 38
        ravA NONE
        viaA 4519059 .. 4519075 +  -2.2  -3.18681   ATAGTTTGTGGCATT              TCACCG CGCAA CAGTGA              TTGATGCCATTCCAG  44 260
        asnC 4520578 .. 4520590 +  -3.3  -2.71364   CCCACATTATCCACA                GCTAG ATC CCAGC                TGATTCACAGAGTAC  42 57
        mioC 4521329 .. 4521348 +  -5.1  -4.32402   GAGATCTAATAAAGA            GATCTTT AAATAA AAAGATC             TTCTTTTAATTAAAG  68 275
        mnmG 4523466 .. 4523491 +  -2.5   -4.1891   ATTTATATGCTGACT         GGGCGTTTTCT GGTC AGAGGATACCC          TTTGTGTTAAAAAAA  57 142
        rsmG 4524487 .. 4524505 +  -3.2  -3.85156   TAAAGACAAAGCAAG             GCTTTATA GGT TATAAATC             GTTTTGTTTTTATTT  53 397
        atpI NONE
        atpB NONE
        atpE NONE
        atpF NONE
        atpH NONE
        atpA 4528962 .. 4528992 + -12.7  -2.82516   CCTGGTAACGCTATG      CGGTCCTGCTTTTC GTTA GGAAAGCAGG-CCG       TCTGGTAATGAGGAG  89 33
        atpG 4529854 .. 4529874 +  -3.2  -3.56366   AGGAACTCACCGAGA           TCGTCGGGG GAGC CTCCG-CGG            TTTAACCAGGTTATT  49 0
        atpD NONE
        atpC 4531985 .. 4532010 + -14.1  -5.22794   TAAGTAACGATAGAA         TGCCAGTCGGT GAAA ACTGACTGGCA          TTTTTTAATACTTAT 100 149
        glmU 4533870 .. 4533880 +    -4  -3.65135   TTATTAAAAGCACCC                 TTCA AGG TGAA                 TTATGCTTCTTTGAA  54 43
        glmS 4535930 .. 4535947 +  -9.1  -5.61913   AGCGTATTAACGAAA             GCCGGCA AATT TGTCGGC              TTTTTTGTCTTTATT 100 73
        pstS NONE
        pstC NONE
        pstA 4539523 .. 4539534 +  -7.2  -3.08679   ATAAATTCCAAAATG                CCGC TTCG GCGG                 TATTGGCTAAAAGAG  62 69
        pstB 4540326 .. 4540340 +  -2.1  -2.83371   ATTATATCACTGGTC               GCTAT GGTTG ATGGC               CTTATTACTGGGCTA  41 15
        phoU 4541156 .. 4541180 +  -7.8    -5.626   AAATAATATTTAACC          CCGGTCAGCC TACTC GTTTGACCGG          TTTTTTTATCCACTC 100 35
ISU55_RS20300 4542315 .. 4542325 +  -3.2  -4.13767   AACGCAATATCTCAT                 CTCT TTA GGAG                 TTTTCCCATGAAACA  58 227
ISU55_RS20305 4543200 .. 4543246 +  -6.7  -3.71873   TAACTTATCCCCTTC GTTTTTGGCGTTGCAGG-GG TTGATTGC CTACCTGCAATGCCAATGAC TTTGGCTATCAGTAC  65 38
ISU55_RS20310 NONE
ISU55_RS20315 4545273 .. 4545285 +  -3.3  -3.53563   CGGGTAACACGATTT                GCTCT AAC AGCGC                TTTCACACCGGCTAT  49 434
ISU55_RS20330 4547693 .. 4547704 +  -4.4  -2.95942   TCCTGAAGTTCATAA                TAGC TGAT GCTA                 TGCTTTCAGTATCAA  47 330
ISU55_RS20335 4548539 .. 4548555 +  -3.8  -3.98204   TTTTGTATTATTTTT              TTCTAT CGGAT ATAGAA              TTTCTGAATGTATTT  58 11
ISU55_RS20340 4548917 .. 4548927 +    -4   -3.7614   TTAATATATTAGCAT                 CAAT AAT ATTG                 TTGTTAATAATAATT  57 46
ISU55_RS20345 4549315 .. 4549341 + -15.2  -3.62597   TAAGAAGATGATCAA         CCTGCTGCGTGA TAG TGACGCAGCAGG         TTATTGAGCAATAAA 100 59
        rpmH NONE
        rnpA NONE
        yidD NONE
        yidC 4552207 .. 4552231 - -15.1  -4.40561   CTTCTGTAAAAAGAA          TAAGGCGGTCA TAT TGACCGCCCTA          AATACTCATGATTAT 100 50
        mnmE NONE
ISU55_RS20350 4549315 .. 4549341 - -15.2  -3.30452   TAAGAAGATGATCAA         CCTGCTGCGTGA TAG TGACGCAGCAGG         TTATTGAGCAATAAA 100 48
ISU55_RS20325 4545577 .. 4545589 -  -2.7  -2.62371   ATTCACGCAACTAAT                CCTTT AAA AAAGA                TAGACATCAGTTAAT  41 78
        yieH 4544806 .. 4544828 -  -4.8  -4.35327   CCATTAAAAACCAAA           GCTCCATG GCACGTT CATGGCGC           TGGTGGTGTAACAAG  66 96
ISU55_RS20195 4518867 .. 4518895 -  -9.5  -4.84529   TGATAAAGTTAAAAA        CCCGCGATGACTG ATA CCGTTATCGCGAG        TTAGCATAGGGGGAT 100 53
         kup 4513631 .. 4513654 - -15.4  -3.57731   TGAATGATGATAGAA          GAGGCCGTTA TGAT TAACGGCCTC           TCAATTAAATTTCCA 100 30
        rbsD NONE
        rbsK NONE
ISU55_RS20165 NONE
ISU55_RS20160 4511764 .. 4511775 -  -2.2  -3.64703   TTCTTGTTACTCAAA                CCCA GGGA TGGA                 GACAATTTAATTCAG  47 85
ISU55_RS20145 4507417 .. 4507427 -  -3.2  -2.86202   GGGACACGAAAATAC                 CGAT CAA ACCG                 AAATTCAACCGTTTC  43 141
ISU55_RS20140 4507242 .. 4507279 -  -7.9  -3.45839   ATTGTTAAAGAGCAA   TATCGTAAACACGACTT GGTA AAGTCATCTTTACGTTA    TTTTTCAGTTCATAA  68 77
ISU55_RS20135 4504157 .. 4504167 -  -6.8  -4.27316   TCTCTCAATTCAAAA                 CACC TTC GGTG                 TTGTAAGGTTAAGCC  74 30
         rrf NONE
ISU55_RS20125 NONE
         rrf 4503657 .. 4503689 - -13.6  -4.62783   GACGGATCGCAAAAA     CAGAAAAGGCCACCC TAAT GGATGGCC-TTTCTG      TTTATTTGATACCTG 100 36
        metA 4501966 .. 4501986 -  -7.5   -3.8165   GGGAAGAAAATAATA            GGCGGCC TCGATTC AGCCGCC            ATAATTAGCATCTAT  70 70
        aceB NONE
        aceA 4498429 .. 4498444 - -10.4  -2.80345   ACCGTACAAAACGGA              GCCTGC ATAA GCAGGC               TGAGGTTATTGACAA  75 240
        aceK 4496686 .. 4496696 -  -2.4  -3.75153   CGCCGTTAATTTAAA                 GCCC GCT GGGA                 GAAGCGTTGCTTTCG  51 5
        metH 4491733 .. 4491770 - -15.7  -3.13784   AATTAAACTGTAATA   TCGAAGGGGATAAACCA ATCA CGGTTTATCCCCCTCGT    TAGATCAACATTATC 100 58
         pgi 4481011 .. 4481033 - -10.6  -5.86332   TCAAGCCAAAAAAAA           GGCCCCTTAC AGA ATAAGAGGCC           TAATAAAGTACAGAT 100 65
        psiE 4480045 .. 4480062 -  -4.1   -3.5764   AAGGTTATTTCGAAA             CCATTGA TAAC TCATTGG              AAGAAGCGGCAGCAT  52 494
ISU55_RS20045 NONE
        malK 4474559 .. 4474580 -  -4.4  -2.71144   CATTCTCTGTAACCA           GGCGTC GCCGTAACTA GACGCC            CAGTTCTTGGTACAG  45 17
ISU55_RS20035 4473199 .. 4473218 - -11.4  -2.66969   CATCAAGATAACGTA            CAGCCGCC CGCA GACGGCTG             AAGAATCGCTGTTAC  80 37
        malM 4472028 .. 4472045 - -12.7  -5.41359   AACCAAACGAAAAAA             GGTGCGC CAAG GCGCACC              AACCATCCAGCCATA 100 58
ISU55_RS20025 4471082 .. 4471098 -  -2.1  -2.75382   GAGTTTACTCAATTA              GTCCGTG TAT CACTGGC              ATACCGCAAGATTAA  39 256
        tssB NONE
        tssC NONE
        tssE 4467524 .. 4467534 -  -3.2  -3.08327   AGCAAACGTTCAACA                 TCCG GAT CAGA                 ACCTTGCTCAGATAA  46 133
ISU55_RS19975 NONE
ISU55_RS19970 4461710 .. 4461729 -  -4.4  -5.50925   AACCAAGATAAAAAA            TAACTTTA GCAT TAAAGTCA             GTGTCGTATATTGGC  85 155
ISU55_RS19965 4460375 .. 4460406 - -13.2  -2.53271   TTATGGCGATAATAT      TAATTAGAGGGGAG TTAC CTCCCCTTTAATTA       CTTTAAACATTTGTT  90 39
ISU55_RS19955 NONE
ISU55_RS19950 4455913 .. 4455943 -  -9.1  -2.80512   AGTGCGAATAAACAC       CGTGCTGGGTAAT TCATT ATTACTCAGCACA       TTTTTATAGGGCCAC  67 51
        xylF 4451402 .. 4451458 -  -3.2  -4.41422   GTATAGATAAAATAA CGGCCAGGTGATTGAGAGTCTATTAATT CAA AATTAAT-GCCTTACAAACAC-TGGCCA TTTATTAAAATAATA  63 63
ISU55_RS19930 NONE
ISU55_RS19925 4448547 .. 4448566 -  -5.7  -4.91459   GAACAGGCAGAAAAA            TCAGCGC GGTATG GCACTGA             TTTTCCTATGGGATA  82 44
ISU55_RS19920 4447253 .. 4447278 -    -4  -4.44448   AGCAGGCTAAATAAA         TCCCCTAATA AAGTAA TGTCAGGGGA          TATTATCGTCCGCTC  66 49
ISU55_RS19915 NONE
ISU55_RS19910 NONE
ISU55_RS19905 4444194 .. 4444236 -  -4.2  -3.05046   CTAGCCTGCCAAAAT GAGCACTGCATGCATA TAGTGCATGAT TTTGCATGCAACGCCC CGGCATCAAAACACC  47 146
ISU55_RS19880 NONE
ISU55_RS19875 NONE
ISU55_RS19870 4440236 .. 4440251 -  -4.6   -4.0274   GCGATGATGAAACAA              TTGCGG CGGG CCGCAG               ATGAGCTACATAAAA  61 234
        hutU NONE
        hutH 4428184 .. 4428208 -  -7.8  -2.91912   GCAGGGATTCAGAGA          GGAGGATCCG GTAAT CAGAGCCTCC          ATTGAACTGGGTTTT  62 371
ISU55_RS19815 4426688 .. 4426718 -  -8.2  -5.20328   CTTGAAAAAAATAAA       TCGGGCCGCTGATA CCC CATCAACCGCCCGT       TAACATTTGTTCCCT 100 40
ISU55_RS19810 4424669 .. 4424694 - -10.3  -4.46656   GGCAGAAGAGTAAAA         TGCCCGCGCCA GAGA TGGCGCGGGTC          GAGCTCCCAAGGAAG 100 133
        eptB 4422547 .. 4422575 -  -4.6  -4.81551   GAGGCACATCAAAAA       TTGGGCCAGACTT GGGT AAGCCTGGCC-AG        TTACGGCTAAATTGC  74 32
        uhpA 4421448 .. 4421463 -  -8.2  -3.69338   AACCAACCCTAATAA              GAGCGC CATT GCGCCC               TGCCCACTGGCTATC  73 438
ISU55_RS19790 NONE
ISU55_RS19785 4419063 .. 4419086 -  -2.4  -2.73468   TAACATTGCCAATGA          TCACACTCGA TCTA TCGATCATGA           CTCGTTTACCTAAAG  40 135
ISU55_RS19780 4418562 .. 4418588 -  -5.1  -3.44529   GCACACACCAATGAA         TGCAGGGAG GTTATATTT CGCCCTGCA         TATCATTCGGTTATT  57 36
         def NONE
         fmt 4413292 .. 4413307 -  -6.8  -5.32944   TTCATAACCAAAAAA              GCTGAC AAAC GCCAGC               AAATAAAGGGAGAAG  89 93
        rsmB NONE
        trkA NONE
        mscL 4409510 .. 4409522 -  -3.3  -4.58395   GTGATTCCCTAAAAA                GACTC AGC GAGGC                TTGTTGTGGCACTAG  64 511
ISU55_RS19515 4384938 .. 4384956 -  -7.4  -4.72272   CCCCGTCAGCAAAAA             GCCAGC CTTCATC GCTGGC             TTTTTGCTCTGTACG  81 205
ISU55_RS19485 NONE
ISU55_RS19480 4377102 .. 4377113 -  -3.6  -3.81951   GCTCACACCACTAAA                CCGG AGTT CCAG                 GTCCGTTGGCGCTGG  57 182
ISU55_RS19450 NONE
ISU55_RS19445 4371607 .. 4371623 -  -2.2  -3.07254   AAAGAGTACAAATTA              TTGCTG CTCTT CAGCAC              CGGCACGGAATGAAC  43 6
ISU55_RS19440 4370400 .. 4370411 -  -5.8  -2.92792   ATCGACCTGAAATTA                TGCC GTTA GGCA                 AAGCTTGGTTGTTGT  54 200
         crp 4368486 .. 4368516 - -12.7  -4.75063   AGAAAACGGGAAAAA      CCGGCGCTAATAGC TTCA GCT-TTAACGCCGG       TTTTTAGAGGGAATT 100 39
ISU55_RS19420 4366198 .. 4366224 - -10.1  -3.82218   AGGCAGAGGAGTAAA        GCGTCCGCGCCA AGGA TGGCGCGG-CTC         GAGCCTACATGGATG  84 125
ISU55_RS19375 4356380 .. 4356403 - -12.4  -3.40899   AATGCGCTAGCAGAA          CGTGGCAGGC GATG GCTTGCCACG           TTAATAACAATTAAT 100 98
        tsgA 4352586 .. 4352610 -   -15  -3.20494   AGTGAATCATCAATA          CCCTGCCACC TTGGC GGCGGCAGGG          CGGTAACGCAGATAA 100 42
ISU55_RS19355 NONE
        nirD 4348000 .. 4348015 -  -6.8  -3.30159   GTAATTTGTTGAGAA              CCCAGC GTTA GCTGGA               TTGATCCGCTATCTA  61 63
        nirC 4346994 .. 4347004 -  -3.2  -2.84574   CAGGGCAACTAATTA                 TCGC AGG GCAA                 AACGCTGCCAAATTA  43 41
        cobA 4345387 .. 4345410 -   -11  -2.53641   CAACGCATCAGTAAT          GTGAGGGGGA AATT TCCCCCTCAT           TAATCAGCATTAACC  76 135
        mrcA 4331744 .. 4331767 -   -14  -5.66684   TAATTTATAAAAAAA          CCAGATGATC ATCA GATCATCTGG           TTTTTTAGATAAGTT 100 58
ISU55_RS19265 4328314 .. 4328324 -  -5.4  -4.09822   AAGCGAGTAGATAAA                 GCTA GCC TAGC                 ATATCCATGTTACAC  65 86
        yrfG NONE
        hslR NONE
        hslO 4326040 .. 4326067 - -13.4  -3.82097   GTGAAACGGAGGAAA        TGGCCGGGCACC AATA GGTACCCGGCTA         AGCATTACGAGGATT 100 39
        pckA 4324208 .. 4324231 -  -6.7  -5.61913   AATAAATAGAAAAAA          GGGGCAC AATTCTGAAA GTGCCCC           CTGTAACGCTAAACT 100 59
ISU55_RS19225 4318427 .. 4318482 - -29.6  -2.90813   TATTTTGTTAAATTA TTAAACTGCCCTCCTCATTATTGGAT ATCA ATCTAATAATGAGGAGGGCAGTTTAA TGGCCGTCCTTGTCA 100 45
        feoA 4317736 .. 4317746 -  -2.4  -3.65996   GCGCAGATAGAAATA                 GGGC GCA GACC                 TGAGTTATTGGGGTT  49 30
        feoB 4315348 .. 4315362 -   -10  -3.15579   CTAATGGGTGATCAA               TGGCAG TTG CTGCCA               CTACTTCGGCAGCAA  74 7
ISU55_RS19210 4315028 .. 4315051 -   -11  -2.50966   ACGGAATCAACATAT          TGAGATGCCC ATAT GGGCATCTCT           TATTGGTGTGCGTGA  76 25
        gntX NONE
        nfuA 4312191 .. 4312201 -  -4.6  -4.00348   CGGCAAGCAAGCAAA                 GCCC GAT GAGC                 TTACATAAGTAAGTG  61 99
        malT 4304214 .. 4304226 -  -4.9  -3.04188   TACCAGAATGACACA                TTATC ATT GATAA                AAAGTTGTGTTGGTA  50 203
        glpE NONE
        glpG NONE
ISU55_RS19155 4301865 .. 4301911 - -15.4  -3.05384   GGGTGTTTCATTGAA CCGAACCTCCAGATCATGGAT AAAAAG ATCCAAGATCTGG-GGTTCAG TGCACTTATGGCCCC 100 167
ISU55_RS19150 4300456 .. 4300467 -  -2.2  -3.39895   CCTCCGATGAACCAA                CCGCC AAT GG-GG                CCATAAGTGCACTGA  45 64
        metJ 4294857 .. 4294869 -  -4.1  -4.26344   ACATTTTTATCAAAA                CCAAG GCG CTTAG                CGTGCTTTTGTGTAT  63 91
ISU55_RS19125 4293976 .. 4294004 -  -7.5  -5.63517   TGCGTAAAGAAAAAA        TGGCTAAGCACAA TTG TTATGCTGAACCA        TTTTTTGTAGTGAAA 100 152
        priA 4290801 .. 4290848 -  -5.6  -4.85918   GATCAGACAATAAAA GATCGGGCGAACCCCTTT TTCTTGACGCTG CAAGGGGTTCGCCATATC CCCTCACCTGAATCA  78 109
        cytR NONE
        ftsN 4288569 .. 4288604 -  -2.5  -2.77182   TTGCAGACTGAATGA    GTCCCCGTACTGCCT GTTAAA AAACAGTACGGAGTA     TATTGAAATTATAAA  42 61
        hslV 4287979 .. 4287989 -    -4  -2.73364   TCTGTACGTTAATTA                 TGTA CTG TACA                 TTAATTATGCAGTGC  45 52
        hslU 4286536 .. 4286566 - -15.4   -4.9934   ATAATACGATAAAAA       CAAGAGTGGGAGGC GAT GCCTCCCACTCGGG       ATACTCCATACTGGA 100 73
ISU55_RS19090 4285465 .. 4285475 -  -3.2  -3.17486   AACAAGCCGTATTAA                 CTGA ATA CCAG                 GCCCACAGCAAACAG  46 11
        rraA 4284769 .. 4284788 -  -8.6  -2.64243   TCACAGTGGATAGGA            GAAGAAGG GGAA CCTTCTCC             TATCTGTGCACTAAT  63 71
ISU55_RS19070 NONE
ISU55_RS19065 4279385 .. 4279414 - -13.7  -3.28712   GTTTTCTGGGCACAA       GTAAAGGGCGATA TCAG TATCGCCCTTTTC        TGTGGGTGCGCCGAT 100 263
ISU55_RS19060 4278675 .. 4278707 - -11.3  -4.44046   GTCAGCGGAAATAAA      TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA      TATGCGCCTATAAGG 100 99
ISU55_RS19050 4276781 .. 4276791 -  -5.4  -3.04517   AGGCGCGTTCAAAAC                 GGTT TAT AACC                 CATTTGTTGTGCGTT  52 92
        glpK 4275061 .. 4275083 - -11.3  -4.93365   TCTCACAACGAAAAA           CGCGCCATC GGGGG GATAGCGCG           TTGTGTTTGGTTTAA 100 100
        glpX 4273858 .. 4273887 -  -7.8  -3.68619   TCTAACTGATGTAAA       CTTTACGGCGCT TTTACG AGCGCCGTGCAG        AATAAAAATGATTGC  70 49
         fpr 4272615 .. 4272634 -  -7.2  -3.36968   GACGGAAGGTGATAA            CCGCTT-TG GCC CAGAAGCGG            TGCCAGTGAAATTTT  62 401
ISU55_RS19025 4271367 .. 4271381 -   -10  -3.03309   GGTCAATAATAATGA               CTGCCT GAC AGGCAG               TTTACCTGTCCAACA  73 96
        tpiA 4270497 .. 4270518 -  -6.5  -5.03994   TTGGATATATAAAAA           CCGGCGC TTTTATTT ACGCCGG            TTTTTGTGTTGTACC  84 63
ISU55_RS19010 4268195 .. 4268213 - -13.2  -4.01078   AAAAGTGACCATAAA             CTCTCCTG AAT CAGGAGAG             CAGATTACCCCCTGG 100 30
ISU55_RS19005 NONE
ISU55_RS19000 4266266 .. 4266284 -  -2.3  -2.94416   CAGGCTCATGACAGA             TCCTCCG TGACG CGAGGGA             AGAGGCTTTGATAAC  42 131
ISU55_RS18995 NONE
ISU55_RS18990 4263973 .. 4264007 - -12.3  -2.63623   TGCGCCAAAAGACAG    GCCACCGAAAAC-AGG ATGA CCTTGTCTTCAGTGGC     TAAGCGACGTTTAAA  88 71
ISU55_RS18985 4262673 .. 4262685 -  -4.7   -3.8709   AAAGTGGTCGATAAA                CGCGG AAC CCGTG                ACGTTGCCGATGCTT  59 499
        cpxR NONE
        cpxA 4254625 .. 4254652 -  -5.6  -3.04461   CACTGATTCTCAATA        TCTGCCCGAACCA CAT TGAT-CTGGCAGA        TAGACGGCAGATTAA  54 37
        trmL 4252830 .. 4252846 -  -5.1  -2.62735   ATATGGGGCAGATTA              GCCAC TCTGATT GTGGC              TGACACGTTCTCTCT  49 53
        gpmM NONE
        envC NONE
        rfaD NONE
        rfaF NONE
        rfaC 4239351 .. 4239361 -  -5.4  -2.56715   ATGTTTATGAACTCA                 CTCT TTC AGAG                 ACAATAAAGCAGCGC  49 40
        waaA NONE
ISU55_RS18860 NONE
        coaD 4236372 .. 4236408 -  -4.4  -3.48657   TGAAATAGCGAAACA   CGGGCAGC-GCAGCA CGTTCTTT TGCCGCCACTGCCAG    CATTGAGAGGTTTAG  52 37
       coaBC NONE
         dut 4232255 .. 4232292 -  -6.9  -4.05495   TAACAAAAACCCAAA   CACCGGCCGCTCTGGGAA CAA TGCCCAG-GCGGCTTATG   TGATAGCTTTTTTAC  69 62
        slmA 4231513 .. 4231549 - -15.2  -3.35867   GTAATCCCGAATCAA    GCTACGCCAAGAGGGC CGTTT GCCCTTTTTGCGTAGC    TTGATTCGCTGTTCT 100 87
ISU55_RS18805 4228894 .. 4228919 - -12.6  -2.70932   TTTTCCTGCGAACCA         GCAAGCCCGC AGATTA GCGAGCTTGC          TGGTTTTTTGTGTTC  88 61
ISU55_RS18800 4227686 .. 4227712 -  -5.2  -2.76261   TTTCAACGGGCAAAG         CAGCAACC CTTTTCTCGTT GGTTGCTG         GCATTGGGGTTCCCG  48 242
         gmk 4225177 .. 4225192 -  -3.3  -2.78816   TGACTGGGCATGATA              CTGAA ACTCTG TTCAG               TCCGCCAATAATTTG  43 22
        rpoZ 4224845 .. 4224855 -  -5.4  -2.71593   ACAGGTACAAAGGCA                 GACT CGC AGTC                 TAATTAACGACGACC  49 29
        spoT NONE
        trmH NONE
        recG 4219751 .. 4219762 -    -3  -3.58329   TAAAGACGCCGTAAA                TACA TCCA TGTA                 GGCTCGAGCCGCGCC  51 214
ISU55_RS18765 4219674 .. 4219689 -    -9  -3.81146   GCTGGGAATTAAGAA              GCCTCA TGAA TGAGGC               TGAGGTTATTGACAA  78 3
ISU55_RS18755 4216698 .. 4216723 -  -6.9   -5.9873   GGACCATAAAAAAAA         TGGCCGG-CATC ATT AATGACCGACCA         TTTCAGTGATGTGTT 100 51
ISU55_RS18750 4214777 .. 4214796 -  -8.6  -4.11216   CTGGTACCCTTAAAA            TCACTGAC ATGA GCCAGTGA             TTTGCTGCCGGGCGA  79 121
ISU55_RS18740 NONE
ISU55_RS18735 NONE
ISU55_RS18730 NONE
ISU55_RS18725 4209471 .. 4209505 - -11.6  -2.77344   TCACTTTTTAATAAC    CTGCGGATGACTGCT GTTAAA AGCA-TCACCCGCAG     TGAAAATGGCCGCCT  81 52
ISU55_RS18720 4209309 .. 4209328 - -13.6  -5.63504   AATGGCACAAAAAAA            CCCTGACG TTAC CGTCAGGG             TTCTTAAATTTGGTC 100 36
ISU55_RS18715 4207578 .. 4207599 -  -3.7  -4.90918   ACAAAATCAATAAAA           GTTAGCCAC GAAA GCAACTAAC            TTTAAATAAAAAATC  70 61
ISU55_RS18710 4205694 .. 4205714 -  -7.5  -3.35224   ATAGCTTCCCAAAGA            GGTGCACCA TAG TGATGCCCC            TAATCAGGGCAGCAC  64 74
ISU55_RS18705 4203441 .. 4203470 - -10.7   -3.8535   TAACCTAAATAAATA       GACCGATGAACGT TGAT ACGCACACCGGTC        CGGTATAAGGGTAAA  88 42
        dppB NONE
        dppC NONE
        dppD NONE
ISU55_RS18685 4199053 .. 4199081 -  -2.4  -4.34402   GCTGCGAGACTAAAA        CTGGCCAGCA ACAGGAACA TGCTGGCTAA        GTGTTTAAACATGAC  58 150
        bcsZ NONE
        hmsP 4195460 .. 4195470 -  -5.4  -3.15841   ATAATCCTATTAAGA                 GTGA AAT TCAC                 ACAACATAATAAAAT  53 214
ISU55_RS18670 4194243 .. 4194266 -  -9.5  -3.14344   GACTCGGCCCATCAA          GGGGCCTCG CCTCTT CGAGGCCGC           AGCAAGCAGCCTTCC  72 74
ISU55_RS18665 4192271 .. 4192281 -  -2.4  -3.04517   ACCCGTGGGGAAAAG                 TGCC AGA GGCT                 AACCGACTCTGGGGA  42 95
ISU55_RS18660 4191462 .. 4191472 -  -6.8  -3.87062   AATTAAGAACTGAAA                 CGCT TCA AGCG                 ACAGCAATACCATCG  67 300
ISU55_RS18655 4189930 .. 4189960 - -17.7   -2.9294   GACATTATGCAGAGA       CGCTACCAGTGAC AGCAA GCCACTGGTAGCG       AATTGAAGGGAGAAA 100 68
ISU55_RS18650 4188007 .. 4188062 - -11.3  -3.38991   AGGCCGCGAATAACA GACGTTAA-TGACCGATCGTTGCAGG ATAAA CCTACAGCCATCGGTCATTTTACGCC TGGCTAACGTGGCCT  86 102
        pdeH 4185462 .. 4185477 -    -9  -3.98159   CAGGAGAAGATGAAA              GGCGAT CATT ATCGCC               TTAGGGAGCGTTAGC  80 36
ISU55_RS18630 4182904 .. 4182927 -  -5.2  -4.15044   CTGCTGGCCAACAAA          GCAAGCCTGA TAAC CCAGGATCGC           GCCTCAGCAGAGGAG  66 65
        yapE 4177180 .. 4177204 - -12.1  -3.80625   CCGTCATAACGCAAA          GCGGCATCCAG TAA CAAGATGCCGC          CCCAAATCATTATCA 100 38
ISU55_RS18610 NONE
ISU55_RS18605 NONE
ISU55_RS18600 4175048 .. 4175075 -  -9.8   -3.4582   GGACTTTATCAAATA        CCGACGGTCAGA TATC TCTGGCCGTTGG         GACATCCTATTTTCC  78 137
ISU55_RS18585 4172136 .. 4172148 -  -4.8  -3.34398   TCTGCCTGGCAAACA                CTGC GTCAG GCAG                ATACCAAAGACGTTC  52 188
        prlC 4166262 .. 4166277 -  -2.6  -2.96683   ATAATAAACAAATAC              TGACGTG TGA CACGT-A              TTAGCCCTTAATACC  43 26
        rsmJ 4165500 .. 4165513 -  -9.5  -3.21934   TTCGGGTGAGAAAAT               GCCGC TAAC GCGGC                GGCGTCACCGATGAA  72 16
        uspB 4160726 .. 4160744 -   -16   -4.8048   GGCGCATATGAAAAA             CCTCCGGC TAT GCCGGAGG             ATATTTATTAATTCT 100 59
ISU55_RS18525 4156894 .. 4156907 -  -2.3  -4.82901   GGTGTTGTATAAAAA               TGCGC TTAC GGGCA                AACTTTATTGTTACT  66 36
ISU55_RS18515 NONE
ISU55_RS18510 NONE
ISU55_RS18505 4150499 .. 4150526 -  -5.6  -2.60211   ATCTCCTCAAAAAGT        TGCCCCTCTCCTT AAT AGGGAGAGAGG-A        TTAGACCGAGCCGAA  52 54
ISU55_RS18500 NONE
ISU55_RS18495 NONE
ISU55_RS18490 4147426 .. 4147439 -  -4.5  -3.01712   GCTGGCGGCTGAATA               CCGAC CGCT GTCAG                TTGATGAACCCACAG  47 480
ISU55_RS18480 4146307 .. 4146323 -  -5.8  -2.57092   AATTCGACTAACTCA              TCACGG GAAAA CCGCGA              GGTGAGTGAGGAGCT  52 39
ISU55_RS18475 4145435 .. 4145458 -    -6  -4.93877   TTCTAGCAAAGAAAA          GGGTATAGCGC GAT GTGC-ATACCC          TTTTTAGTTAACGTA  82 80
        gntR 4143946 .. 4143957 -  -4.4  -2.89191   CGATAGCGGCATAGA                GCAA TATA TTGC                 TGGCATGATGGGCAA  47 457
ISU55_RS18460 4142220 .. 4142233 -  -3.1  -4.08394   AGACTGCTGGCAAAA               TCCGA TGAC TCGAA                CCAGCTCCAGATCAC  58 53
ISU55_RS18455 4141644 .. 4141654 -    -4  -3.54363   AACAACATCAAAAAG                 TGAA AAA TTCA                 TATGTCACCATCCGT  52 217
ISU55_RS18450 4140902 .. 4140916 -  -2.8  -5.47399   TCAACGTCAAAAAAA               CCAATT CAA AATGGG               TCTTTGACTGCTGAC  80 180
         asd 4138718 .. 4138735 -  -9.8  -4.60949   CATACGATAAACAAA             GCCCGC ACTCTG GCGGGC              TTACGGGTCTTCCAC 100 67
ISU55_RS18435 4138180 .. 4138192 -  -4.9  -3.27617   CAACAAAGTGATTAA                TAACA AAT TGTTA                CGTTAGACGTGGTAA  53 160
ISU55_RS18430 NONE
ISU55_RS18425 NONE
ISU55_RS18420 4136909 .. 4136928 -   -10  -5.63645   TTAAAATATAAAAAA            CCCTGACC ATAA GATCAGGG             TGCTTTGTTGTTCTT 100 515
ISU55_RS18410 4122735 .. 4122768 -  -5.4  -4.90296   AAAACCCTATAAAAA     TTAATGCCAGAG TATAACCCAC CTCTGGCATTAC      TATTATTCCTGACAC  75 127
        glgB NONE
        glgX NONE
        glgC 4114922 .. 4114952 -  -3.9  -4.07133   CATTCTGATAAATAA       GTTCAGTCTGATC AATAA GCTCAGTCTGATC       AATAAATCCAACCTG  58 63
        glgA 4113253 .. 4113264 -  -2.2  -3.35283   ACAACGAGTCGACAA                TGAC GAGC GCCA                 ACAATAACGAGCGCT  45 110
        glgP 4110691 .. 4110720 -  -5.8  -4.86939   CAAGAAATTTAAAAA      CCCTCTTCAATCGG ATAA CCG-C-GAAGAGGG       TTTTTTACGGTGGCA  78 70
ISU55_RS18370 NONE
ISU55_RS18365 4107480 .. 4107492 -  -4.1  -3.34646   AAGGTGACAAATATA                TAGCT TGA AGCCA                AACGGGTTTGTGCCC  51 75
ISU55_RS18360 4106716 .. 4106734 -   -11  -2.73735   AAACAGGCGGAATGA             GTCCGGCA GAA TACCGGAC             TCAGGTAGAAAAGCA  77 399
        argC 4099139 .. 4099151 -  -2.7  -2.57132   TCTGTTGCTCACAAT                TTATG GCT CACAA                TCTGTTTACTGCAAT  41 103
        argB 4098154 .. 4098167 -  -6.7  -2.63182   TCTTAATAGAAAACC               CTTCG TCCT CGAAG                CTACAGGGTTGTTAG  56 145
        argH 4096693 .. 4096718 - -17.6  -3.75897   AACTGTTAATGCAAA         GCGGGCCGCT GCAATT AGCGGCCCGC          CCCGTTCTCAAGATT 100 54
ISU55_RS18325 4093473 .. 4093490 -  -7.1  -3.04144   TTGTTACGGTGAACA             TGGATTA TTAT TAATCCA              TGCGGTTCCATAAGT  61 191
ISU55_RS18320 4092784 .. 4092812 -    -6  -2.77899   CGGTGGTATCAATGA        CTCAGCCAGAAA GTTAT TTTCTGGCTGTT        TTTCTTAAGCGGCTA  53 30
ISU55_RS18315 NONE
ISU55_RS18310 4089429 .. 4089449 -  -6.1  -3.13164   TTTCCAATGACTTAA            CCGAGATAT TTT ATTCCTCGG            CTAACGCGAGGTGCA  57 15
ISU55_RS18305 4088474 .. 4088490 - -11.5  -3.53811   CTCAGGCGGTTCAAA              CCGGGCA CGG CGCCCGG              TTTTTAATCCCCCGT  89 106
        oxyR 4084725 .. 4084743 -  -4.6  -3.80461   CAAGCCATGATCAAA             GGTGAA GCCAACG TTCACC             TGATTGAAGATATCC  56 385
        fabR NONE
ISU55_RS18275 4082343 .. 4082361 - -10.3  -4.83243   CGCAGATAAAAGAAA             GGGCAAC GACAT GTTGCCC             TTAGTTGGCAAGACG 100 111
        btuB NONE
        murI 4077658 .. 4077687 -  -2.9   -3.5393   ATTACTTTCTGCAAA       TAGGCATCTTGAC CGAA GTCAAAATGTTTA        CTGCTTTGGTCACTC  48 383
ISU55_RS18255 4075920 .. 4075930 -  -3.2  -2.86202   GGGACACGAAAATAC                 CGAT CAA ACCG                 AAATTCAACCGTTTC  43 141
ISU55_RS18250 4075745 .. 4075782 -  -7.9  -3.45839   ATTGTTAAAGAGCAA   TATCGTAAACACGACTT GGTA AAGTCATCTTTACGTTA    TTTTTCAGTTCATAA  68 77
ISU55_RS18245 4072660 .. 4072670 -  -6.8  -4.27316   TCTCTCAATTCAAAA                 CACC TTC GGTG                 TTGTAAGGTTAAGCC  74 30
         rrf 4072412 .. 4072432 - -10.4   -4.8048   CGCGCACAGCAAAAA            CCCCACGC TTTGG GCATGGGG            TCTTGGCTTTATTTG 100 43
ISU55_RS18235 4070350 .. 4070364 -   -10  -3.87815   CTGGAGCGCTACAAA               CACTGG TCG CCAGTG               ATTGCCGTTGGGCAC  78 400
ISU55_RS18220 4069042 .. 4069056 -  -7.2  -3.17218   AAAATTAAAAGCAGA               GTTGTT CAT AACAAC               ATTTAGTCTATATAA  62 110
ISU55_RS18215 NONE
        dsbA 4067380 .. 4067396 -  -6.5  -6.32017   AATAAATAAAAAAAA              GGGGC AACAAAA GCCCC              CTCTTTATGTACTAA 100 42
        polA 4063864 .. 4063890 - -18.1  -5.24129   TCTGGGCACAAAAAA         CGCCCCAGTCA ATAAA TGACTGGGGCG         GCTAATATACAGCCA 100 258
ISU55_RS18200 4063156 .. 4063176 - -12.5  -3.75817   TGGGCACAATAAATA            TCCTCCGGC ATA GCCGGAGGT            TTTTCATATGCGCCT 100 105
ISU55_RS18195 4062440 .. 4062472 - -11.3  -3.92143   CAAAATCCCCATAAA      TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA      TATGCGCCTATAAGG 100 99
        yihI NONE
        hemN 4058330 .. 4058341 -  -4.4  -4.98531   CGTGGAAAGCAAAAA                TCTG CATC CAGA                 GACCGAAGCGGCGCT  76 461
        typA 4052161 .. 4052185 - -14.3  -3.75738   TAGGAGGAGTAAGAA          CTCAGGGCGCC TTG AGCGCCCTAAG          TATCAACAATGCAAA 100 47
        yihX 4051249 .. 4051273 -  -7.2  -3.31144   GGGCCAGCGTGATAA          GGGTTAGC ACGACTAAG GCTAACCC          ATTAATGATTAGAGC  64 47
ISU55_RS18150 NONE
         dtd 4049483 .. 4049498 -  -4.6  -4.37092   AGGGCCGTTATAAAA              CGACGC TTCA GCGTGG               AGTAATGGCCCCCCG  66 397
ISU55_RS18130 NONE
ISU55_RS18125 4044257 .. 4044272 -  -6.8  -5.81412   TTTAGGCAAAAAAAA              GCCACC TTGC GGTGAC               TTAATTTTCATACTA 100 238
ISU55_RS18115 4042111 .. 4042128 -  -2.1  -5.00616   CTCCCTCTCAAAAAA             TTAAATA ACGT TATTCAA              AATAGCATTACTTCC  68 33
ISU55_RS18110 NONE
ISU55_RS18105 4039779 .. 4039793 -  -2.8  -3.72236   TCTATAAAAAAGAGA               CAACCT AAG AGGTTC               AAACTAATTTATCGA  50 251
ISU55_RS18090 NONE
ISU55_RS18085 4035965 .. 4035984 -  -7.1   -3.5882   CAGAGGAGGCCGAAA            CTCGGGC TGGTAT ACCCGAG             TGGCTGAGTTCCCAT  62 249
ISU55_RS18070 NONE
ISU55_RS18065 4031434 .. 4031445 -  -4.4   -4.0371   GAGCGGTTAGACAAA                CTGT GCTT ACAG                 CTTAAATGGCAACTA  61 270
        ptsP 4026138 .. 4026154 -  -2.9  -4.58395   TGGATTCGGTAAAAA              GCACCGC GGA GCAATAC              GGTAAATCAGCCGGT  64 465
        lsrK 4016502 .. 4016544 -  -9.1  -3.12999   CCAGCGCACAGTCAA CGGAGC-ATACACGCAGCACG TGA CG-GCGGCGAGCATTGCCCCG AAGCGCAAGCTGGCC  69 126
        rfaQ NONE
ISU55_RS17985 4013626 .. 4013646 -   -14  -3.67976   GCCATTAACGTTAAA            CGGCACCC ATAAA GGGTGCCG            CGGCTAAACAAAAAA 100 235
ISU55_RS17980 NONE
ISU55_RS17975 NONE
ISU55_RS17970 4008530 .. 4008553 -   -11  -5.75342   GTTCGTCAAAAAAAA          CAGCCCCG TGACTGAC CGGGGCTG           CTGAAATTACTTTTA 100 65
ISU55_RS17955 4005674 .. 4005691 -  -3.5  -2.94237   AAAAAAAAGAAAATG             GCTTTTT TAAT AAAAAAC              TGACTCACGTATTTT  46 346
ISU55_RS17945 4003695 .. 4003711 -  -2.9  -2.62616   TCACGTTTTATATTA              TCCCCGA TGA TCGGATA              CCCCCATCATGACAC  41 32
ISU55_RS17930 NONE
        rimI 4001219 .. 4001243 -  -3.6  -5.43329   AAAAACAAAATAAAA         CGGCGCTATGCC ATT GGCA-A-CGCCA         TCATAATGGCATCTT  84 6
        prfC 3999317 .. 3999333 -  -2.9  -3.80466   ATCACAGAAGAAACA              CAGTCGG AAT CGGACTA              AAACAGGATTTTCAT  52 148
        osmY 3998376 .. 3998397 -    -8  -3.82946   CCAGTTTAAAGATAA           GGTGCCTG ATTAAA CAGACACC            CTTTCATTTGGCTCT  72 143
ISU55_RS17910 NONE
ISU55_RS17905 NONE
ISU55_RS17900 3995615 .. 3995630 -  -6.2  -3.83324   CTACAAAGATGTAAA              TGTGAT CATA ATCACA               TTAAAGTTCAACAAC  65 412
ISU55_RS17895 3994179 .. 3994203 -  -8.6  -2.62735   ATACGCCTGATAGCA          TGTGCCGTTT GACAA AAACGGCACC          TTATACATCACAGTG  63 33
        deoC 3992763 .. 3992795 -  -6.9  -3.34398   GCGCTTTCGGAAATA      GCGACACAGCAGGCC TTC AGCCTACTGTGCATC      AATTCAGTGTAATGA  61 52
        deoB 3989890 .. 3989904 -  -4.2  -3.17229   ATTTCAGCATTAATA               TGTGGC GTT GCCATA               ATCACTTTCCTTAAA  49 149
        deoD 3989115 .. 3989142 -   -15  -3.71527   AGAGGAATAAATCAA        TTCAGCGGCAGA GATC TCTACCGCTGAA         GAAAGAAAAAACCGC 100 67
        serB 3987152 .. 3987171 -  -5.7  -2.52208   AAATGATTTATCAAC            GAATGGC CTACTT GCCACTC             TCGTGCTTTAAGCTA  52 13
        radA 3985566 .. 3985579 -  -4.5  -4.74052   ACTAAACAAAAATAA               CACAG TATG CTGCG                GGATTGGCACTATTA  71 135
        nadR NONE
ISU55_RS17850 3982951 .. 3982968 - -12.7  -2.78197   CCTGACAGATAGAAG             GGCCTGC AATC GCAGGCC              TTTTTAGTCAGGGTA  89 29
        sltY 3972722 .. 3972739 -  -4.2  -3.72984   TGATAACCACCCAAA             GTACTA TTTAAC TAGTAC              AACAAGCATACCATA  54 267
        trpR 3972178 .. 3972188 -  -2.4  -4.27584   ATTTCGAATGTAAAA                 CAGC AAG GCGG                 CGCAATCGGGATTTT  57 152
        gpmB 3970626 .. 3970646 -  -4.7  -4.16016   GTACGCTTGAACAAA            TTTCAACAC ACC GTGCTGAAT            TACGCTTACATTTTT  63 414
        creA 3969331 .. 3969350 -   -10  -3.45632   ATAGAGACGGAAAGA            GCCAGCAC ACAG ATGCTGGC             TTTTTTGTTTTTATA  78 154
        thrL 3967556 .. 3967578 -   -12  -6.11644   TGATTGAAAAAAAAA           GCCCGCAC TGTCTAG GTGCGGGC           TTTTTTCTATTGTTT 100 45
        thrA NONE
        thrB NONE
        thrC 3962797 .. 3962809 -  -4.8  -3.61715   TAGCTTTGTTAATAA                CCGA TTACT TCGG                CAATGCCATCAAAAA  57 17
ISU55_RS17760 NONE
         tal 3959665 .. 3959680 - -10.4  -5.45652   ATCGGCAATAAAAAA              GGTGGC TTGC GCCACC               TCATTCAGATACCGA 100 68
         mog 3958819 .. 3958833 -  -2.8  -3.53722   CCCACACGCACATAA               TGGCAT CTT ATGTCA               TAGAAATTTTCTATT  48 40
ISU55_RS17745 3957284 .. 3957313 - -10.3  -5.02287   GAGAAAAAGATAAAA       GCCCATAATTTATT GAT AATAA-TTATGGGC       TTTTTAAAGTGAATT 100 44
        dnaK 3951543 .. 3951584 -  -8.5  -3.04144   TTCCTACCCTTAACA TGCGTGCACGGGCGTAGAG TTTC CTCGACGCCCGTGCTGGTT  TCCAGCAACAGTAAG  65 72
        dnaJ 3950310 .. 3950329 -  -8.6  -6.08563   AACAGATAAAAAAAA            TCCTCGAT ATCA ACCGAGGA             TTTCTTTCATTTTAC 100 76
        nhaA 3948900 .. 3948929 - -13.7   -3.2048   TTTAAATTCCACCAA       GCATTGCTGCC TGCGCTTG GGCAGCAATGC        TGAATCAATAACGTG 100 49
        nhaR 3947823 .. 3947836 -  -9.5  -3.90048   GTGCTTGTAAAAAGA               CCGGC TTAG GCCGG                TTTTTTTATCTCTAT  81 113
        ribF NONE
        ileS NONE
        lspA NONE
        fkpB NONE
        ispH 3941131 .. 3941148 -  -8.4  -5.55769   GGGCACAATAAAAAA             GCAGCC ACAAAG GGCTGC              TTCAGACTGCTGACA 100 237
ISU55_RS17680 3940418 .. 3940442 -  -9.9  -4.44046   CTTACCCCAAATAAA          TATCCTCCGGC ATA GCCGGAGGTTT          TTCATATGCGCCTAT 100 103
        dapB 3939172 .. 3939190 -  -2.4  -5.80951   ATTTAAAATAAAAAA             GGATAATA AAA TATTGCCC             TATTATCAAATGATT  85 81
        carA NONE
        carB 3934300 .. 3934319 - -13.6   -4.7629   CTACGAACGTAAAAA            GGGCGATG TTGC CATCGCCC             TTGATTTTCGCCACG 100 55
ISU55_RS17655 NONE
ISU55_RS17650 3931885 .. 3931898 -  -5.3  -3.05914   AGCGAATGATACATA               TAGGA CTGC TCCTA                GCCTAGTGTCGTGGC  52 58
        folA 3931238 .. 3931264 - -15.3   -3.9941   CTGGGCACAATGAAA         CAGGCCCATTA TTACC TAATGGGCCTG         TATGCTAATTGTTTT 100 60
ISU55_RS17640 3930523 .. 3930555 - -11.3  -4.08767   TTTATTTTTCTAAAA      TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA      TATGCGCCTATAAGG 100 99
ISU55_RS17635 3929804 .. 3929815 -    -3  -3.14878   CTTTTCAATTTAACA                GAAT CAAC ATTC                 CAATCCATCCAACTG  46 83
ISU55_RS17630 3929235 .. 3929254 -  -7.9  -3.93026   AAGACGCTAATTAAA            GACGCAT GAGCTT ATGCGTC             TTTAGATTTCACCTA  74 53
        djlA 3920997 .. 3921009 -  -7.7  -3.81339   CATCCAGAAGCCAAA                GCGAT GGC ATCGC                GGCTGCAGCTACATG  69 409
ISU55_RS17580 NONE
        tssB NONE
        tssC 3915064 .. 3915083 -  -2.8  -3.61398   TTCCCCCTCTAATAA            GCG-AGTGA TAT TCACAGCGC            TTATTTCTTTTCGCT  50 26
ISU55_RS17565 3914360 .. 3914384 -  -7.2  -3.03243   ATCCAGTTTGGAAGA          CTGCTCTC CTAACTCGC GAGAGCAG          TCCTAATGCATTTCT  61 44
ISU55_RS17560 3913891 .. 3913905 -  -2.1  -3.64703   TGTGCGTTATTTAAA               GAACG CGAAC CATTC               CATAGGAGTAATCGA  49 6
        tssF NONE
        tssG NONE
        tssH NONE
        vgrG NONE
ISU55_RS17535 NONE
ISU55_RS17530 NONE
ISU55_RS17525 NONE
ISU55_RS17520 NONE
        tssJ NONE
        tssK 3899645 .. 3899679 -  -3.5  -2.71712   GCGTGCTGCGGAAAT     GGCTGCACGGATCTG GCGTT CAAATTCGTTCATCC     GAGCCTTCCTTGTCG  44 20
ISU55_RS17505 3897900 .. 3897914 -  -4.2  -4.24711   GAAAATTGCAACAAA               TGGCCA CAG TGCCCA               AAATAAAATCAGAGC  63 178
ISU55_RS17495 3893873 .. 3893883 -  -3.2  -4.07885   GATGGTGCTGGAAAA                 CCTG AAT CAAG                 CAGGCTGGCGTTTAG  56 331
ISU55_RS17480 3887210 .. 3887220 -  -6.8  -2.91099   TACACGATAAAATAG                 GGCT GTC AGCC                 ACCGTGTCCGGGTTT  58 39
ISU55_RS17455 3879317 .. 3879347 -   -12  -3.20896   TAAGTAACTAATAGA      TTGTTGGTGCCGG GTCGTA CCGGC-CCAACAA       GTAACACGTTTAACT  86 125
        leuO 3871483 .. 3871497 -  -3.5  -3.87075   ATCAGTTTCGATAAA               CAGCA TACAT TGCCG               TGAGCGATGCGATTT  56 146
ISU55_RS17415 3869201 .. 3869240 - -13.6   -3.5362   GAACGGTCAGAAAGA  CAGCAGCGACCAGTGTGA GACT TAACACCGGTCACTGCGG   GGAGGAATGGTGAAC 100 44
        ilvI NONE
        ilvN 3866526 .. 3866546 - -13.3  -5.24129   TCTGGGCACAAAAAA            GCTCAACGC TAT GCGCTGAGC            CCGATCATTAGAGCG 100 54
ISU55_RS17400 3865812 .. 3865844 - -11.3  -5.54403   AAAAAATAAGAAAAA      TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA      TATGCGCCTATAAGG 100 99
         cra 3864371 .. 3864388 - -11.3  -4.45544   TGTCAGCAATCAAAA             TCAGGGC GGGT GCCCTGA              TTCGTTATAGTGAAC 100 40
ISU55_RS17385 3862872 .. 3862886 -  -4.2  -2.87132   TGTTTTTGCGATATA               TCCCAT AGA AGGGGA               TATTTTAAGGGATGA  46 424
        mraZ 3862271 .. 3862284 -  -3.9  -2.78384   TTGTTGTCTACCATA               CTTAT AGCG ATAAG                CCCTGTAGCCGCTCA  45 13
        rsmH NONE
        ftsL NONE
ISU55_RS17365 NONE
        murE NONE
        murF NONE
        mraY NONE
        murD NONE
        ftsW NONE
        murG 3851618 .. 3851640 -  -2.8  -2.78738   TCAAAACCGTAACCA           TTTAAAATTG TAG CTATTTCAAA           GTGATCGCGATTTTA  42 38
        murC NONE
ISU55_RS17325 NONE
        ftsQ NONE
        ftsA NONE
        ftsZ 3845768 .. 3845778 -  -3.2  -2.74122   GTTTAGCACAAAGAG                 CGGA GAT TCCA                 AATATTCGGAAATTA  43 38
        lpxC 3844554 .. 3844591 - -11.4  -2.71731   GTGATCTTGGAACGA   CTGGCTGCGTTGGC CGGAGAGGGT GCCAACGCAACCAA    GCGTGATAAGTAGCT  80 205
        secM 3843462 .. 3843480 -  -6.6  -3.31248   TAATATCTCTTACAA             GACCACCA AAC CGGCGGCC             AAAGGTTGTATAAAA  61 63
        secA 3840494 .. 3840511 - -12.7  -4.92828   AAACTTAAAAATAAA             GGGCGGT ATTA ACCGCCC              TCAGACTGCTGACAA 100 240
        mutT 3839980 .. 3840007 -  -9.3  -5.24129   TCTGGGCACAAAAAA        TGGAGCAA-ACG ACGGA CGTCTTGCTCCA        TTAAAATAAAGTAGG 100 63
        uxaC NONE
ISU55_RS17200 NONE
ISU55_RS17195 3825051 .. 3825090 - -12.2  -2.77051   TTAATAAGCAAACAG  CGCACTCCCCCTACA-GCT TAA AGTGTGAAGGGGAAGTGCG  TTTCCATAAAAAACA  83 76
ISU55_RS17190 3824421 .. 3824439 -   -16   -4.8048   GGCGCATATGAAAAA             CCTCCGGC TAT GCCGGAGG             ATATTTATTGTTATC 100 44
        rlmG 3815264 .. 3815295 - -15.2  -3.85879   TAGAACTGAGAATAA      TCACAGGGTGTGGC GAAA ACCCCACCCTGTGA       AATACCGATTAGAAA 100 34
ISU55_RS17115 3803205 .. 3803219 -  -2.9  -2.89564   GGCTCATCCCAGAGA               GTTAA GTTAA TTAAC               GTTAATCGGACACAT  42 40
        cdiA NONE
        cdiI 3793071 .. 3793092 -  -3.9   -3.7941   TATTCTCCACAACAA           TTTAAAATC CCTT AATTTTAAA            AATACGTAACAAACC  56 5
ISU55_RS17100 NONE
ISU55_RS17095 NONE
ISU55_RS17090 3792488 .. 3792498 -  -3.2  -2.78606   CTAAGTAACATATCA                 GCGA ACC TCAC                 GAATATAATTATTCT  43 12
ISU55_RS17085 NONE
ISU55_RS17080 NONE
ISU55_RS17075 3790849 .. 3790883 -  -5.6  -2.62263   AGGCCGCTGACAGCA     TTCCTACCGCTGTACT CCG AATGCAGCGGCGGGAG     CTTGCTTTTGTATCT  52 193
ISU55_RS17055 NONE
ISU55_RS17050 3781012 .. 3781028 -  -6.5  -2.83677   AAGGAATTTACTATA              GCATGAG CCA CTCAGGC              TTTTGTAGCGCCACA  55 82
ISU55_RS17045 NONE
ISU55_RS17040 NONE
ISU55_RS17035 NONE
ISU55_RS17030 NONE
ISU55_RS17025 3776367 .. 3776382 -  -2.5  -3.53563   ATAGTGTTCTCCAAA              TCAGG TAATCT CCCGA               TCACTCTGCCGCATG  48 47
ISU55_RS17020 3773813 .. 3773827 -  -4.2   -3.2946   AAGAAAACGCAGGAA               TTGGCG GTG CGCGAA               ATTGTGGTAGCAGCA  50 368
ISU55_RS16990 NONE
ISU55_RS16985 NONE
ISU55_RS16980 3765128 .. 3765139 -  -4.4  -3.16068   TTTTTAATTTAAAAC                CCAT TAAA ATGG                 CGATATTATTTATTA  49 93
ISU55_RS16975 NONE
ISU55_RS16970 3763991 .. 3764020 -  -2.2  -2.91681   TGGGAATTTTATATA       CTCTGCCATT AAAATATAAA AATGGTAGAG        TTATCACTGTGTTTA  42 56
ISU55_RS16965 3763126 .. 3763139 -  -3.7  -2.79831   CGAAGCCCTATCACA               GCTCG ATCG CGCGC                CCATTTAATGATGAG  45 248
ISU55_RS16950 3760623 .. 3760643 -  -6.1  -3.34715   CAGCCTGCTTAAACA            TTGTTGCCC GTA GGACGACAA            AACTAATCGTTCAAC  59 157
ISU55_RS16935 3758846 .. 3758862 -  -3.8  -3.93868   CCGCCAAAAGAAAGA              GTTAAA ATCAA TTTAAC              AATAATACCTCACAC  58 35
ISU55_RS16930 NONE
ISU55_RS16925 3756870 .. 3756890 -  -2.5  -4.56367   CACCTCACAAATAAA            TCATGCCAT TAA AAGGCATCA            CCTATATTGATTCTC  61 13
ISU55_RS16920 3756016 .. 3756034 -  -3.8  -3.55444   TTTGGAGTCCTTAAA             CTTCCATG ACG CCTGAAAG             ACCGGTTGCCCTTCC  51 387
        tsaD 3747740 .. 3747765 - -12.6  -3.47841   ACACCCATATCAGAA         TGACTGCGGC AACGCA GCCGCAGCCA          CGCTCAGCCATTCTG 100 42
        folB 3746187 .. 3746209 -  -8.4  -5.77632   AAAACCACAAAAAAA           CGGCAATGCT GAA AACAGTGCCG           TTCTATTTAGAATTT 100 235
        bacA 3745125 .. 3745148 -  -2.2  -4.17048   CCCCCTGTAAAACAA          GGGGTTTCAG ACTC CTGCCCCCCC           GATGACACGATCTTG  55 204
ISU55_RS16850 3741570 .. 3741589 -    -5   -3.0693   CTGTAAACCAAACCA            GGCATC GATATACG GATGCC             ATTCACTTTATGGAT  50 33
        glnE NONE
        hldE NONE
        yjeH 3735434 .. 3735460 - -10.1  -3.82218   AGGCAGAGGAGTAAA        GCGTCCGCGCCA AGGA TGGCGCGG-CTC         GAGCCTACATGGATG  84 146
        ribB 3733735 .. 3733746 -  -7.2   -2.9138   CACCAAATAATATCA                GGCG AGAT CGCC                 ATCAGATTAGCTGGC  61 32
        ygiD 3732141 .. 3732177 - -10.3  -2.57564   TTATTTTGGGATAAT    TATAGTAAGGGAAGGCA ATG CACCTTCCTTTACCATA    CCCAAAGTCATTGCC  74 394
        nudF NONE
ISU55_RS16790 3727092 .. 3727106 -    -5  -3.36968   CAGGCAAGGCCATAA               GTCTGT CTA ACAAAC               CGGAACGGCCACCGC  53 17
        cpdA NONE
        yqiA NONE
        parE NONE
ISU55_RS16770 3722518 .. 3722529 -  -4.4  -3.80625   GTTCCACAAGGCAAA                CCAA TTCC TTGG                 CATGAAACCATTACC  57 192
        parC 3719431 .. 3719457 -    -8  -2.72379   CGAACGCCTCAATCA         CCACCACAGC CATTTCC GCCATGGTGG         TGGCTGGTTTCCTTA  60 44
ISU55_RS16750 3718411 .. 3718421 -  -8.2  -3.89695   TGGCGATAAATATAA                 CCGC CGC GCGG                 GGCCGCGATAGCCTG  75 60
        ftsP 3716710 .. 3716722 -  -9.1  -3.83409   GTACATATCAGTAAA                CCTGC GAA GCAGG                CAAGCGAGACATGCG  78 156
ISU55_RS16730 3712981 .. 3713011 -  -9.7   -4.2558   TATCTCGTACCAAAA       CTGGCGGCATTAC CGCAT GTCATGCTGCCAG       TCCTCCTGTTTATAC  93 4
ISU55_RS16720 3710418 .. 3710434 -  -5.8  -4.65916   TCCAGGTGAATAAAA              CGGCAT CTAAT ACGCCG              TTTCTATGAAGCCTT  75 70
        exbB NONE
        exbD 3706330 .. 3706368 - -13.2  -3.18505   CCTCAAAAACCAAAG   TTGATGCAAGCGCGGTAA CAG TAACCGCGCTTGCAAAAA   ATTATTTTGCGCCGC  95 27
ISU55_RS16630 3695074 .. 3695094 - -12.5  -3.79864   TTCATAGAATAAATA            TCCTCCGGC ATA GCCGGAGGT            TTTTCATATGCGCCT 100 105
ISU55_RS16625 NONE
ISU55_RS16620 NONE
ISU55_RS16615 3690273 .. 3690290 -  -4.1  -4.87786   CTAACGGCATAAAAA             GCGAC ACTTATTG GTCGC              TTGAGGTTATTGACA  71 208
ISU55_RS16605 3686896 .. 3686912 -  -2.9  -3.90416   ACATGACACAAAATA              GCCCATC TCA AATGGGA              GAGTCGGGTGAATTA  54 444
ISU55_RS16560 NONE
        fliE NONE
        fliF NONE
ISU55_RS16545 NONE
ISU55_RS16540 NONE
        fliI NONE
        fliJ 3672920 .. 3672949 - -15.9   -5.4833   CCACCCAATAAAAAA       TCCGTCATAGAGA ATAT TCCCTATGACGGA        TTTTTTTATGGTCGC 100 56
        flgB NONE
        flgC NONE
        flgD NONE
        flgE 3667995 .. 3668010 -    -4  -2.80935   AGCTTATCCATTACA              GCACCTG GAA CAG-TGC              ATTCATCATGCTGTC  46 5
        flgF 3667225 .. 3667252 -  -5.6  -2.52015   TCCATATTGAGCAAG        TGGCGCAGATTAA GAC TTCACC-GCGCCA        TCGCCATTAACTGCC  52 32
        flgG NONE
        flgH NONE
ISU55_RS16475 NONE
ISU55_RS16470 3664199 .. 3664213 -  -4.2  -2.90349   TCGCCAAACTTAAAT               CGGTTT GAT AAGCCG               TTATTTACTGCCCAA  47 26
        flgK NONE
        flgL NONE
ISU55_RS16455 3660651 .. 3660680 -   -13  -2.75708   GGGGCTGAAAAAACG       GCTGACATGTGCG ATCAA CGCACATG-CAGC       TTGAAGAATAACGGG  91 108
ISU55_RS16440 3657207 .. 3657253 - -15.4  -3.05384   GGGTGTTTCATTGAA CCGAACCTCCAGATCATGGAT AAAAAG ATCCAAGATCTGG-GGTTCAG TGCACTGAGTACCCC 100 68
ISU55_RS16435 3655427 .. 3655449 -  -6.9  -2.91681   GGTCAACCCGACACA           GCCACTCAC GGTGG GCGCGTGGC           ATATTGCTAATATTC  58 424
ISU55_RS16425 3653338 .. 3653354 -  -4.5  -3.06501   GAGAGTTGCACCCAA              TTAAGAA TTT TTCTCAA              TTAAGCGTTGTTCTC  50 153
ISU55_RS16420 3651763 .. 3651784 - -10.2  -3.86346   TCATTGCCCCATAAA           TTAGGCCC ATGCAG GGGCCTAA            TTCCCTGACGGCGTA  86 62
ISU55_RS16375 3629045 .. 3629065 -  -4.9  -3.71848   TTCCCTTAGTAAGAA            TATCTTTAT AAA ATAAAAATA            CAGCTCCCTTGGATG  57 418
ISU55_RS16370 3627796 .. 3627808 -  -9.1  -2.73212   AACAGCAAGCACAAG                CCTGG CAA CCAGG                GAGACTGGGTGAATA  66 364
ISU55_RS16290 NONE
ISU55_RS16285 NONE
ISU55_RS16280 3591281 .. 3591302 -  -2.9   -3.5511   GGTTATTGACAAAGA           GCCTGCGCT GGAG AAAACAGGC            AGATCGTAAAGATAC  48 140
ISU55_RS16275 3589081 .. 3589111 - -11.3  -3.24188   CGACATGATGATCAA       CGGCGCATATT GCAGGACAG AATATGCGCCG       TTTTTTATGGGATAA  86 55
ISU55_RS16260 3574649 .. 3574684 - -17.6  -3.85698   CTGTTTTGTCATAAA    GCCCATACCCGCCGGT TAAG ACCGGTGGGTATGGGT     GACTCTTTGGGGGCA 100 53
ISU55_RS16245 NONE
ISU55_RS16240 3566929 .. 3566947 -   -11  -2.73735   AAACAGGCGGAATGA             GTCCGGCA GAA TACCGGAC             TCAGGTAGAAAAGCA  77 240
ISU55_RS16230 3563729 .. 3563765 - -12.4  -3.56142   CCCATCAATAATTAA   GGGGCTTTGCGCAAAAT TAAG ACATTGCGCAA-GCCCC    TATAATTTGTTTATG 100 176
ISU55_RS16200 NONE
ISU55_RS16195 3553946 .. 3553983 -  -2.1  -4.17048   TCTTGTCTAAAAGAA   TTGACCCTAAG-GATATT TTA AAGATCACATAGAGCCAA   ACACATTCAATTTTA  55 167
ISU55_RS16180 3549764 .. 3549778 -  -4.2  -2.88427   AAGAGGGGCTATATA               GAATCG AGC CGTTTC               TTCGTTGATAAAACC  47 351
ISU55_RS16170 3547413 .. 3547431 -  -3.9  -2.62263   ATGTCTTTTATATTA            CTTTTCCC AGTT GGGAAA-G             CACCAATAATTCACT  44 242
ISU55_RS16165 3546500 .. 3546513 -  -6.7  -3.32294   TTAAAGTGCGGATAA               CGGTA TTGA TACCG                ATTTTTAGCGTTCTT  61 314
        tssB 3544013 .. 3544030 -  -2.7  -2.89447   TTCTAATGACAAGCA             GCCAATC CCGG GATTAAC              CCTCTTTTGGCGCCA  42 21
        tssC NONE
        tssK NONE
ISU55_RS16140 NONE
ISU55_RS16135 NONE
ISU55_RS16130 3538058 .. 3538077 - -11.4  -5.69068   TAAAAACACAAAAAA            GCAGGCGG CGAA CCGCCTAC             TTGCGGGGTTACCCT 100 109
        tssH NONE
ISU55_RS16120 NONE
ISU55_RS16115 3530424 .. 3530438 -  -4.2  -2.66787   GGAATATTTATAGCA               GCCTCT CCC AGAGGG               GTTGATTTATGCTCT  45 100
ISU55_RS16110 3529880 .. 3529892 -  -4.9  -4.27686   GAAAATGATTGAAAA                TGATT GAA AATCA                TATTAATTTATTCGA  66 155
ISU55_RS16105 3529600 .. 3529621 -  -2.2  -3.76402   ACCTTAGCCATCAAA           CCCTCTCA GATAAA TGCGAGGA            TTTTACCTGATGATC  51 28
ISU55_RS16095 NONE
ISU55_RS16090 NONE
ISU55_RS16085 3524606 .. 3524627 -  -2.2  -3.76402   ACCTTAGCCATCAAA           CCCTCTCA GATAAA TGCGAGGA            TTTTACCTGATGATC  51 95
ISU55_RS16080 3523651 .. 3523661 -  -2.6  -5.36441   TCCTTATACAAAAAA                 TTAT TAT ATAA                 ATAGTTTGTGTAATG  76 268
ISU55_RS16075 3522198 .. 3522224 -    -5  -4.25056   TACGGGACGAAGAAA         CCGGAGGATGTC GAT GACAAACTTCGG         TTTTCTTGCGTCTTA  66 462
        speF 3519116 .. 3519145 - -11.5  -3.05521   ATGAGATGTTTAATA       CCGAGGCCATC AATTAAAA AATGGCCTCGG        CTGATGGAGCGGAGA  83 50
ISU55_RS16055 NONE
ISU55_RS16050 NONE
ISU55_RS16045 3514793 .. 3514815 -  -6.3  -3.54424   CGCTATGTCGGGAAA          CGTGCTGGCG ACGC CGCCAACA-G           TTTCTGGCTAGATAA  59 304
        trmB NONE
ISU55_RS16010 3507218 .. 3507235 -  -9.8  -4.91852   GCCAGTAAAAACAAA             GGCGCC GGTTAG GGCGCC              CTGTTTAATGATCAG 100 57
        glsB 3506202 .. 3506213 -    -3  -3.29829   TATACTCTGCCAGAA                CTTA TCTT TAAG                 CAGAAGAAGAGCTGT  47 42
ISU55_RS16000 NONE
ISU55_RS15995 3505354 .. 3505378 -  -7.7  -2.75963   ATGGCGATTCTAAAT          TTGGAGGGGGA ATA TCCCCCCCCCC          CTTTTATTACTCTAA  61 32
ISU55_RS15990 3503213 .. 3503227 -  -4.3  -2.58959   TGAGATTAAATAGAG               GACAA ATCCA TTGTC               ATTTATCTTTACCCC  45 72
ISU55_RS15985 3495323 .. 3495335 -  -3.4  -4.69664   CAGATTACCGAAAAA                GGAA AATTG TTCC                TTAACTCGCTACTGG  66 244
ISU55_RS15950 3489227 .. 3489237 -  -8.2  -2.54655   AAAATCTGGAAGTTA                 CCGG CTC CCGG                 CCCGCTTTATAACAC  58 411
        speA 3478362 .. 3478381 -  -8.6  -5.40072   TCGCGCCGAAAAAAA            GGACAAAC CTGA GTTTGCCC             TTTAATCGATACTGA 100 56
ISU55_RS15895 3477671 .. 3477692 - -15.9  -2.56596   TCTCTTATCAATGCA           GACGCCCCA CTGT TGGGGCGTC            AGACTGCTGACAAAC 100 265
         tkt 3474249 .. 3474264 - -10.4  -5.93809   TGGGCACAAAAAAAA              GACCGC AAAA GCGGTC               TTTTAACAGGTGCAT 100 166
         epd 3470307 .. 3470320 -  -4.5  -4.20148   ATCACGGTAAAACAA               GACGT TAAT ACGCC                ATACTAGAAACCGCT  63 29
         pgk 3469029 .. 3469048 -    -7  -3.82208   GAGGAAATAGCGAAA            CGGGCGGC ATTG ACCCCCCG             TTATCCAAATTACTG  67 35
        fbaA 3467811 .. 3467838 - -14.2  -3.62046   GCACTTTGTCAATAA        CCTCAAAGGCCC CGTA GGGCCTTTTAGG         TCAGTCCGAACAGAC 100 46
        mscS 3466501 .. 3466516 -  -7.5   -4.7497   CCGAGCGAGTAAAAA              CGGGC ACTGAG GCCCG               TTTAATCTATTTACC  85 61
        argO 3465532 .. 3465552 -  -2.6  -3.48924   GCACCTGTCAGAGAA            TCAGTG CACGACACT CACTGA            AATTCCATTAACATC  48 145
ISU55_RS15825 3464527 .. 3464543 -  -4.3  -4.02139   GCAAATCGAAAAAGA              GCTGGCC TCG GGCGAAC              TGATTGACCTGACAC  61 185
        rpiA 3462746 .. 3462782 -  -2.2  -5.22039   TTCAAAGGCAAAAAA    TTATCAGGGTGAAGCC AAATA AACGACACCCTGAAAA    ATTTTAGCCAATCAC  71 29
        serA 3461000 .. 3461026 - -22.4  -6.02914   TCGAGATAAAAAAAA         CACCGGGGATCC TAT GGATCCCCGGTG         TCAGACTGCTGACAA 100 237
ISU55_RS15785 NONE
        pepP NONE
        ubiH 3456080 .. 3456093 -  -6.7  -3.63805   ACCCCATAGGGTAAA               CCTCA ACGA TGAGG                CGCGTTAATCCCGAT  65 53
        ubiI 3454694 .. 3454745 -  -8.3  -3.05022   TGCTTTAGACACACA CTGGCG-GTGTCTCATTAATAC-CCG TAA CGGCGTATTATTGAGA-ACGCTCCAG CCATTCTGGCAAATC  65 8
        gcvT 3452863 .. 3452881 -  -3.1  -3.26779   TCCTTAAAAGAGATA             GAGCC AAAAGAGAA GGCTC             TTATAATTCAGAATA  47 54
        gcvH NONE
        gcvP 3449221 .. 3449247 -  -7.2   -3.9749   AGGCAGAAGAGTAAA        GCGTCCGCGCC AGAGAA GGCGCGG-CTC         GAGCCTACATGGATG  72 142
ISU55_RS15745 3448042 .. 3448064 -    -2  -4.93661   AGACCAATAATAAAA           CAATGGTAAA TCA TTTATCATGG           ATAAAACTGTCGTTA  68 510
ISU55_RS15730 3444030 .. 3444052 -  -3.3  -2.76686   ACTGTACAGAAATAG           CGCACTCAG ATTAA CTGAGAGTG           ATTTCAGTGTACACC  43 129
ISU55_RS15725 3443125 .. 3443137 -  -6.3  -3.52063   GAAATTAAACACTAA                CACAA CCA TTGTG                CGATTATGCGGGGTA  61 141
ISU55_RS15720 3442447 .. 3442462 - -10.4  -2.89564   GTTCTACTCTACAGA              GACCGG TTAA CCGGTC               TCTGTATTTTGTTTT  75 61
        sdhE NONE
ISU55_RS15705 NONE
        creB NONE
        creC 3438208 .. 3438234 -  -3.7   -2.6155   CCTTTTAACATGAAT         TGCACTCCT TTTAACATC AGGAGAGCA         GTTTACGACCATGAA  44 94
        creD 3436675 .. 3436693 -  -8.1   -3.1875   CAGAGCTCAATTTAA             CGGGCAC CCGAT ATGCCCG             TTAAGTTTAGTCTAG  63 87
        xerD NONE
        dsbC NONE
        recJ 3432492 .. 3432507 -  -3.2  -3.42574   GGAATGTCATGAGAA              CCGATA ATTC TAACGG               ATCTGTACGACAGTT  49 141
        prfB NONE
        lysS 3429775 .. 3429790 - -11.8   -4.7497   CTGACTCAGTAAAAA              GGGCGC CGTA GCGCCC               TGAGGAATTTATCGT 100 54
ISU55_RS15655 NONE
ISU55_RS15650 3428107 .. 3428122 -    -9  -5.19879   CTCTAAATACAAAAA              GGCATC GTGA GATGCC               TTTAAAAAGTTTGGA 100 75
ISU55_RS15640 NONE
ISU55_RS15635 3426497 .. 3426511 -  -7.2  -3.70307   TCCACTTAATAAATA               TAACCT AGT AGGTTA               TTTATAGCAAGTCAT  68 136
ISU55_RS15630 3426167 .. 3426181 -  -2.8  -3.79251   CATTTCATCATTAAA               TCTCCT TAA ACGAGA               CATTCAAAACATCAT  52 6
ISU55_RS15625 3425436 .. 3425470 - -10.2  -5.26155   ATACAAAGATAAAAA     CTGACTGAATAGTT TACTAAT AACTGTTCAGTCAG     TATTCAGAGGTGTTC 100 319
ISU55_RS15615 NONE
ISU55_RS15610 3422172 .. 3422223 -  -6.6  -4.40993   TATAAATTATTAAAA CAAAAGCGCT-TCCCGCCACC GATAAAAATAG GGGGGCGGGCTATCGCTTTTG TTGAAAGTGAGGTGA  74 104
ISU55_RS15585 3419474 .. 3419487 -  -3.9  -3.76125   TTAGCTTAACTGAAA               GATAA GGTT TTATC                AGGCATCAGAAAGCA  56 81
ISU55_RS15580 NONE
ISU55_RS15575 3417284 .. 3417299 -  -4.6  -4.21343   GCGAATACAGATAAA              GGGGCT TCAG ATCCCC               CTACCGGTTATATAA  63 33
ISU55_RS15570 NONE
ISU55_RS15565 3416052 .. 3416064 -  -3.3   -2.8372   CACCCTTCAGGAAAT                CCGAC ATT GTCGC                TTATATTTTCAGCAA  43 361
ISU55_RS15560 NONE
ISU55_RS15555 3412824 .. 3412853 -  -7.3  -2.94412   CGCAACTTCAAATGA       GAATATTCACACA ACAA TGTAGGAATATTC        AACCAAATCATGATT  61 266
ISU55_RS15550 3411659 .. 3411669 -    -4  -3.31144   GCCGTATCGCCATAA                 TTTG ATG CAAA                 ATTGACATCGCTCTT  51 66
ISU55_RS15545 3410672 .. 3410696 -  -9.4  -3.80733   CTCACGCCAGAACAA         GTAGCG-CGTA TTAA TACGGCGCTAC          TGGCTGCGGTAGACA  73 517
ISU55_RS15500 3399816 .. 3399832 -  -2.2  -4.82901   GGTGGTGCACAAAAA              CCATCG CATAC CAACGG              CACGTGGGGGAATTG  66 81
ISU55_RS15495 NONE
ISU55_RS15490 NONE
ISU55_RS15485 3396325 .. 3396354 -  -2.9  -2.92335   TTAAATAATAAATAC       TTGGT-GTTGCCCA TAA TGGGCAACGATTAA       TTAAAAACTTTCATC  43 22
ISU55_RS15480 3394197 .. 3394218 - -12.3  -5.47218   GTCGATGTAAAAAAA           CGCCCACTC GGCT GAATGGGCG            TGTATGGCATTCAGT 100 47
ISU55_RS15475 3393809 .. 3393819 -  -2.6  -4.66163   ATTGTGAGTTAAAAA                 TAAA TTC TTTA                 GGATTGAGAGAAATG  64 23
ISU55_RS15465 3390486 .. 3390507 - -12.3  -3.49634   ATGTTAAATACAAGA           CGGACTTCC TGAT GGAAGCCCG            TGAGGTTATTGACAA 100 358
ISU55_RS15450 3385045 .. 3385059 -  -7.1   -3.1505   AGTACCGTTGATGAA               CCGCA TGGTC TGCGG               TTCGTCTCTTCGACT  62 120
ISU55_RS15370 3366959 .. 3366988 - -14.5  -3.44206   CAAGATCCACGATAA       CCTCTTCCTGAGCA GAT TG-TCAGGAAGAGG       AAGTCAGCCGTCGAT 100 47
ISU55_RS15360 NONE
ISU55_RS15355 3364010 .. 3364028 -   -16  -4.37092   ATTGTGCCCAGAAAA             CCCCCAGC TAG GCTGGGGG             TTCAGTAAAGCTTTC 100 263
ISU55_RS15330 3355086 .. 3355102 -  -2.3  -4.68209   ATTTCAAGAAATAAA              GTTAATT TTC AAATAAC              TGTTTAAGTTTATAA  63 368
ISU55_RS15325 3354227 .. 3354242 -  -4.8  -3.12957   TTAACAAAAAAAACC              TCATTA TAAA TAATGA               TAGCAAACATATAAT  51 69
ISU55_RS15320 3353634 .. 3353646 -  -4.1  -3.12449   TGCCACTAATATACA                TGATG TTA CACCA                TTTATTTTAGATGGA  49 94
        gspD NONE
        gspE NONE
        gspG NONE
ISU55_RS15295 NONE
        gspI NONE
        gspJ NONE
ISU55_RS15280 NONE
        gspL 3344891 .. 3344906 -  -3.3  -4.60924   TAAATGCTGTAAAAA              CATGA CGTAAC TCATG               GTTGGCTGCTTAGTT  65 21
ISU55_RS15270 NONE
ISU55_RS15265 3343510 .. 3343524 -  -5.8    -3.186   CAAGATATCAAGATA               TCAAAT CAG ATTTGA               CTGCTAAAAATACTA  55 77
ISU55_RS15255 3342211 .. 3342225 -  -2.8  -2.91582   CATCGGATGTATATA               GGCATA AAT CATACC               AATAATTGCCCCCCC  43 19
ISU55_RS15250 3341738 .. 3341749 -  -2.2  -3.15078   TATATTTCAGCAATA                GCAC CATT ATGC                 TGTGATAGTTAAATG  43 97
ISU55_RS15245 3339867 .. 3339878 -  -5.8   -4.2717   ACCATGCTAGCAAAA                GTGC AAGG GCAC                 GGCTTCCCAACATTT  68 122
ISU55_RS15230 3337115 .. 3337129 -  -4.2  -3.40597   TGCTTCAGGTAAAGA               GAGAAC GGC GATCTC               AAGTAACAAGGATAT  52 235
ISU55_RS15225 3335767 .. 3335782 -  -3.2  -3.64142   TAAAACAGCAGACAA              CGCTTT TCCA ACAGCG               TCTGGCAACAGTCAT  49 53
        lysA 3333019 .. 3333054 -  -6.1   -2.7185   ATGAGCGTTTAATTA    CCTACGGCACCCCCGA CGAAC TCGGCGGTGA-GCAGG    CAATGACCGATCTAC  51 366
ISU55_RS15205 3329471 .. 3329488 - -11.3  -6.11644   GTACCTAAAAAAAAA             CCTACGC ATCT GCGTAGG              TCGGTGCAAATAAAA 100 342
         aas NONE
        lplT 3325946 .. 3325956 -  -5.4  -2.72661   CAGCAGTCTGAAGGA                 TCTC CTT GAGA                 TCCTTTCAGATGACA  49 52
ISU55_RS15185 3325054 .. 3325069 - -11.8  -3.43203   CTATCATAATATGAA              GGCCGC TGAT GCGGCC               TTGAGGTTATTGACA  91 347
        rppH NONE
        ptsP 3319295 .. 3319312 -  -2.8  -3.91488   AAGTTCTGTAAACAA             CAATTA CCTTCT TAATTG              ATATTGCAGCGGTGT  54 146
         lgt NONE
        thyA 3317481 .. 3317499 -  -8.8  -4.36485   ATAAAAGACGCAAAA             CGGAGCCA TTA CAGCTCCG             ATATGAAGATTAAAT  86 35
ISU55_RS15150 3316709 .. 3316724 -  -4.7  -3.80014   ACATTGACCACTAAA              GGCAT AAATGG ATGCC               TGCCATGGATTGTTG  59 5
ISU55_RS15145 NONE
ISU55_RS15140 NONE
ISU55_RS15135 NONE
        recC 3311727 .. 3311739 -  -2.6  -3.84808   TTGAACTGACAACAA                GCGC TCTTC ACGC                CTTATTATGGCGAGC  52 20
        recB NONE
        recD 3301168 .. 3301189 - -11.6  -3.76634   ATTTGAAACAGATAA           CTCAGGGC GCTTAT GCCCTGAG            ATTATTGGCGATTTA  95 27
ISU55_RS15090 3298026 .. 3298039 -  -8.1  -2.84192   GATATCATCATTAGA               CACCC TATC GGGTG                TTTTTTTGTTTCTGG  61 211
        mltA 3296277 .. 3296292 - -11.8  -4.20084   AGTACTCATGCAAAA              GCGGCC AACT GGCCGC               TTAATCAAAACAAAT 100 64
        tcdA 3295180 .. 3295193 -  -3.8  -4.13767   CCGTGGAGGGTAAAA               CACC ACAACA GGTG                CTGGCCGCAGACCCC  61 193
ISU55_RS15055 3293119 .. 3293131 -  -7.7  -3.00022   GGTATGCCAGACATA                GTAGC TAA GCTAC                TGCTTTTTTTCACTT  62 240
ISU55_RS15050 3291949 .. 3291963 -  -2.8   -2.6834   AGCATTACAATTAAC               CAAACA TTA TGATTG               ATCAGTTTTCATAAC  41 27
ISU55_RS15045 NONE
        rlmM 3290069 .. 3290092 - -14.6  -4.90455   ATATACGCATAAAAA          CTAAGGGGCC AATA GGCCCCTCAG           ACTGCTGACAAACCC 100 238
         syd 3285925 .. 3285955 -  -6.9  -3.94648   ATAGAAAGAATAGAA       GTGATGTCTCACA GCTGG TGTGAGAGATCTC       GCACACCAGTAACAC  69 64
ISU55_RS15015 3284736 .. 3284776 - -11.9  -6.17669   AACAAAACAAAAAAA  CAAATAAATATCCTCCGGC ATA GCCGGAGGTTTTTCATATG  CGCCTATAAGGCTCT 100 95
ISU55_RS15010 NONE
        truC NONE
ISU55_RS15000 3282956 .. 3282987 - -12.5  -3.14878   CTCGGTAACCGAATA      CGTATTGTGACAA CGAAAC TTGCCACAATACG       CAATAAAATCAAGAT  93 48
        rpsB 3276642 .. 3276660 -   -16  -3.74792   CATTAGATATGCAAA             GGGGGCCT ATA AGGCCCCC             CTAACCAACATATTT 100 81
         tsf 3275698 .. 3275721 - -12.4  -4.68384   ATCGAGTGAATAAAA          TGGAACCGCC TATT GGCGGCCCCA           TTTGGAGCATTAAGA 100 35
        pyrH 3274731 .. 3274744 -  -4.5   -4.2074   CGGTGAATATACAAA               CCAAC AGTT GCTGG                CTAAAGGGGCAGACA  63 78
         frr 3274060 .. 3274089 - -11.5  -5.44721   ATGACCGGAAAAAAA       GCA-AAGCGCCGCC TAA GGCGACGCTTATAC       AATGCGAGTAGAGAT 100 40
        ispC 3272540 .. 3272559 -  -8.6  -5.63504   AAGTGCACAAAAAAA            GCCGTGTAC CAA GT-CACGGC            TTCTGGAGTGACAGC 100 160
        ispU NONE
        cdsA NONE
        rseP 3269460 .. 3269483 -  -2.3  -2.52464   GTTCTTCCTAACCTA          TCCCCTGCC GTTAAA GACGGGAGA           AATCATTGAAAAGTG  39 12
        bamA 3266965 .. 3266984 -  -3.5  -3.16683   ATCCCACCTGATGAA            GCGTCAG ATTTCA CCAACGC             GACTTAAGATCCTTT  48 87
         skp NONE
        lpxD 3265230 .. 3265242 -  -2.7  -5.00616   TTCCTGTCTAAAAAA                CTGAT GCT ATCAA                CAACACGGCCTGCAC  70 148
        fabZ NONE
        lpxA NONE
        lpxB NONE
        rnhB NONE
        dnaE NONE
        accA 3257442 .. 3257464 -  -5.5  -6.08563   AATAGATAAAAAAAA           CCGGCGC TTAAATTCC GCACCGG           CTTTTATCAGTTGGC 100 48
ISU55_RS14890 NONE
        tilS 3255305 .. 3255318 -  -2.3  -3.80855   CTCCTCAAAAATTAA               CGGGA CTCT TCCAG                ACAACGGACAAACCC  51 228
ISU55_RS14880 3254724 .. 3254745 - -11.5  -4.56597   CTTCCTTGTGAAAAA           CGGGTCGCT GAAG AGCGGCCCG            TTTTGCATTTATCCT 100 247
ISU55_RS14865 NONE
        arfB NONE
        nlpE 3252069 .. 3252080 -  -5.8  -5.09762   AGTGGAATACAAAAA                CCGA CGCG TCGG                 TGAGAAACAAATGAT  86 223
        gmhB 3245412 .. 3245441 -  -2.9   -3.5393   ATTACTTTCTGCAAA       TAGGCATTCTGAC CGGA GTCAAAATGTTTA        CTGCTTTGGTCACTC  48 368
ISU55_RS14815 3243674 .. 3243684 -  -3.2  -2.86202   GGGACACGAAAATAC                 CGAT CAA ACCG                 AAATTCAACCGTTTC  43 141
ISU55_RS14810 3243499 .. 3243536 -  -7.9  -3.45839   ATTGTTAAAGAGCAA   TATCGTAAACACGACTT GGTA AAGTCATCTTTACGTTA    TTTTTCAGTTCATAA  68 77
ISU55_RS14805 3240414 .. 3240424 -  -6.8  -4.27316   TCTCTCAATTCAAAA                 CACC TTC GGTG                 TTGTAAGGTTAAGCC  74 30
         rrf 3240123 .. 3240143 -  -6.7  -2.59683   ACTTTACCCTATAAG            GGCCAGCGC TCC GCGCTGTGC            AAAACCGCTTTTGGC  56 86
ISU55_RS14795 3239969 .. 3239989 - -14.1  -5.24449   TATAAATGCAAAAAA            CCCTGAATC TAA GATTCAGGG            TTTTGCAATAAGTGG 100 38
        dkgB 3238797 .. 3238815 -  -9.6  -5.83211   CACCAAAATAAAAAA             CCACCTCA ATG TAAGGTGG             CTCGTCCAGTGTCTT 100 50
ISU55_RS14780 3237178 .. 3237193 -    -9  -4.60889   AATCACTGTCAAAAA              GCACCT TTCG AGGTGC               TTTTTTATGGTTGGA 100 30
ISU55_RS14765 3233919 .. 3233939 -  -2.4  -5.11033   CATAACTGGAAAAAA            CGCGGCTG GAAAA CAGCCGAT            CGTAAGCCAGTGCGC  74 263
        dnaQ 3232773 .. 3232791 -  -2.4  -3.03159   GGAATGGCGTCAACA             CTTTTTCC AGT GAAATAAG             CCATTTGCACAGTTT  42 58
ISU55_RS14750 3232598 .. 3232624 - -15.3  -4.18303   AGCAGAAACGACAAA         GCCCTGAGTTA TTACT TAACTCAGGGC         TTCTAAATTTTGGCG 100 36
ISU55_RS14740 3230176 .. 3230191 -  -4.6  -4.37092   AGGGCCGTTATAAAA              CGACGC TTCA GCGTGG               AGTAATGGCCCCCCG  66 374
ISU55_RS14720 NONE
ISU55_RS14715 3227353 .. 3227382 -  -2.9  -3.53761   TAATTTCTTGTTAAA       TGGCCTTAGCA CTAAATCC CACTAAGACCA        TACGATGAATGACTT  48 89
ISU55_RS14685 3222402 .. 3222422 -  -4.7  -3.64703   GGCGTTGCATGCAAA            TTCATGCAC TAT ATGCATGCA            GTGCTCTTTTTGGCA  57 6
ISU55_RS14650 NONE
ISU55_RS14645 3215465 .. 3215485 -  -5.4  -5.56673   AGTGACAACAAAAAA            TAAGGCGC TGATT GTGCCTTA            CTTTTTTGCCTGCTC  87 23
        grpE 3211474 .. 3211495 -  -9.4  -3.92694   TAAAATTAGAGCAAA           GTCCCGGC TAGGAG GCCAGGAC            TTTGTTAGCAATTTG  83 77
        sdhC NONE
        sdhD NONE
        sdhA NONE
ISU55_RS14600 3206026 .. 3206047 - -12.3  -2.53263   CCTACCGTGAAGCTA           CCCGGAGAA TCCC CTCTCCGGG            TTAATAAACTCACAT  86 164
        sucA NONE
        odhB 3201715 .. 3201733 -  -5.2  -3.85817   AGTGTTCTGGATAAA             GCCGATCC TCA AGACCAGC             TTTGTCAGTTATCTT  61 62
        sucC NONE
        sucD 3199555 .. 3199572 - -12.7    -5.252   CATTTGTATAAAAAA             GGCCACC AAAA GGTGGCC              AGTATGTCGCGTTAG 100 72
        cydA NONE
        cydB NONE
        cydX 3195990 .. 3196002 -  -3.3  -2.96538   ACAACTTATCAGACA                GCATC GTC GTTGC                CATTGTTAGCGGCTT  44 6
        ybgE 3195662 .. 3195683 -  -8.7  -4.36586   ATAGAACGAAAATAA           TTATGGGCC GGAT GGCCCATAG            GTAGGATTGTGCTCA  86 48
        ybgC NONE
        tolQ NONE
        tolR 3193995 .. 3194041 -  -2.2  -3.92577   GAACTGCTAAAAACA GGGTATCTACGGGTTGAGCTAA CGA TTAGCCCAACCAATATCAACGC AAATTTATATCGGTT  53 30
        tolA 3192739 .. 3192749 -    -4  -2.53164   TGATCCATCATTAAC                 TAAC AAC GTTA                 CACCCTGTCAATCAA  45 44
        tolB NONE
         pal NONE
        cpoB 3189936 .. 3189970 - -14.4   -4.0162   TCTTCACACGATAAA     GCCCAGAAATCAGTCA AAT TGACTAAATCCTGGGC     TCAAAAAAGCTAAAG 100 35
ISU55_RS14520 NONE
ISU55_RS14515 NONE
ISU55_RS14510 3189246 .. 3189256 -  -5.4  -4.54026   TCCTAAACAAAATAA                 CCAA TAT TTGG                 CAAAAAGTCGCCAAA  70 213
        nadA 3187994 .. 3188007 -  -2.5  -2.63079   TGCCGATAGAACTGA               TTTAT TAAA ATAAA                AGTCTCTTGCTCATC  41 101
ISU55_RS14500 3187176 .. 3187196 -  -4.7  -4.10953   AGGCAGTAAACGAAA            CCGAATCAG GAA CTGATTTGA            ACCGTATTTATGCTA  63 65
        aroG 3184528 .. 3184551 -  -7.5  -5.62219   AACACAGTAAAAAAA          CCCCGTACAT GAATA ATGT-CGGGG          TTTTTTATTGACGGC 100 156
ISU55_RS14435 3174189 .. 3174212 -  -7.4  -5.04175   GGAATGATACAAAAA          TGCCCAACGT TTAT ACGCCAGGCA           TTCAGAAATCAGAGA  89 76
        modA NONE
        modB NONE
        modC 3171203 .. 3171213 -  -2.4  -3.36452   AGCGGGGAACAGCAA                 GGGG AAA CGCC                 TCCAACAGTGGGTTG  46 293
         pgl 3169200 .. 3169212 -  -4.7  -2.62263   ATCTCTGCGACATCA                GCGCC ACA GTCGC                CGTCAATTTAGACAT  48 122
        bioB NONE
        bioF NONE
        bioC NONE
        bioD 3163874 .. 3163909 -  -4.7  -3.41234   GATCAATTGAATGAA    GGCTTGATTAGCGAGC ATTTA GCCCGCTGAGCAA-CC    TCAGGGCCGCGGCGC  55 171
        uvrB 3160027 .. 3160054 -  -2.8  -3.87994   AGGCATCTCGATAAA        CCTTAAGGCGCTG AAG CAA-ACCTTAAAG        CAGCGAGATAAACTT  52 59
ISU55_RS14370 3159504 .. 3159516 -  -2.7  -4.87133   ATGGCGTAAATAAAA                TCCAT AAA ATAGA                TGGAATACACGTAAT  67 60
        moaA 3156947 .. 3156960 -  -5.3  -2.71144   CACTTGCCCGAATCA               CTTAC TGAT GTAAG                CTCATCGGCGCTAAT  49 50
        moaC NONE
        moaD NONE
        moaE 3155598 .. 3155615 -  -7.7  -3.51475   TAAATAATAAATACA             GGCTATC GACT GACAGCC              CACCGTCTTTTTAAG  68 118
ISU55_RS14340 3154772 .. 3154792 - -11.2  -5.18726   TGGGCACAACAAAAA            GGACACCA GATTT TGGTGTCC            TTTACTATCTCAAAC 100 88
ISU55_RS14335 3154056 .. 3154088 - -11.3  -5.63517   TGGTGAAAGAAAAAA      TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA      TATGCGCCTATAAGG 100 99
ISU55_RS14315 3147653 .. 3147666 -  -2.3  -3.16071   CGCCAGATGAAGAGA               CCCCA CTAT TGCGG                ATTATTGATCGGGAA  43 27
ISU55_RS14310 3146437 .. 3146452 -  -5.4  -3.22874   GGCCAGACAATAAAT              TGGCAA GAGA TCGCCA               GCGGAGCCATTTTAG  53 116
        xapA 3144156 .. 3144172 -  -5.1   -4.2558   GACTCGGCATTAAAA              TACAGGC GAT GCCTTTA              GCGCCATAGACTAAA  68 301
ISU55_RS14290 3142959 .. 3142983 -  -9.9   -4.4572   AACATGGCAAATAAA          TATCCTCCGGC ATA GCCGGAGGTTT          TTCATATGCGCCTAT 100 103
ISU55_RS14275 NONE
ISU55_RS14270 3137961 .. 3137979 -  -3.9  -3.28791   ACTGCGGGGCCATAA            GTGAACAG CTAT CTGTTC-C             GAACTGAGGTTCCAT  49 305
ISU55_RS14265 3136533 .. 3136545 -  -4.7  -2.91695   GTGACGGCCAAATCA                GTCGC TTT GCGCC                ACCTCCTACACATGA  47 282
ISU55_RS14255 NONE
ISU55_RS14250 3134726 .. 3134762 -  -4.3  -3.43042   GTTTCGACGAAAAAT    CGCCTAGGCGTTTCA GGGGCAG CGCACCGCCTAGGTG    CGGATAAATTACAGC  52 34
        rhlE 3127075 .. 3127103 - -13.2  -4.86731   CCCTCCCAAAGAAAA        CACCCTGTCAGC TTACC GCTCACAGGGTG        GGGGTGATCATCTTA 100 105
ISU55_RS14205 NONE
ISU55_RS14200 3125393 .. 3125409 -  -2.4  -3.24255   TAATAGAACAGTGAA              TATTAA TTTAC TTAATA              AGTATTTATCCATTC  45 31
ISU55_RS14195 NONE
ISU55_RS14190 3124559 .. 3124587 -  -9.6  -4.86731   CCCTTCCAAAGAAAA        CACCCTGTCAGC TTACC GCTCACAAGGTG        GGAGTGACCATCTCA 100 78
ISU55_RS14185 3122754 .. 3122771 -  -6.3  -3.14564   TCACTGCGGTACCAA             TCGGCAT GCTG ATGCCAA              ATTCCAACAAAAAAG  57 511
ISU55_RS14170 3120885 .. 3120909 -  -9.9  -4.55697   ATTTTGATAAATAAA          TATCCTCCGGC ATA GCCGGAGGTTT          TTCATATGCGCCTAT 100 103
ISU55_RS14165 3119581 .. 3119624 -   -14  -3.63744   TCGTGTGGTAAAATA CCCATGGGCAATGCCCATTT ATGA AAATGGACATTGCCAAAGAG ATAGTCTAAATACGT 100 44
        dusC 3118329 .. 3118341 -  -2.7  -4.81306   CGCAAGAAAAAACAA                TAACA TAG CGTTA                CTCTCGGCAATACGT  67 89
        pbpG 3116825 .. 3116854 -   -13   -3.7791   CAATTAGTCACTAAA       GCGGAATTTGCC TCTGCT AGCAAATTCCGC        TTCTCAGTCGCGATG 100 49
        cyaB 3113819 .. 3113833 -  -2.7  -5.34365   CGATAAGAAGAAAAA               CGCGC TAATG GCGTG               TTGGCGTTTGAGTAT  76 488
ISU55_RS14130 3112521 .. 3112532 -  -2.2  -3.97674   GTATCACCTAAATAA                CG-GC TTG GCGCG                GGGAGAAAATATGAT  53 6
ISU55_RS14125 3111955 .. 3111972 -  -4.8  -4.62069   GTTGCATGTGAAAAA             GGTGAC AAAATA GCCACC              TTTTTCGTGTGTTTA  71 133
        phnC NONE
        phnD 3110024 .. 3110045 -  -8.7  -4.46215   TACACCTAAAAACAA           TAGCTCCGG CGAA CCAGAGCCA            TGTTGTTTTATCCGT  93 50
        phnE NONE
        phnE 3108040 .. 3108055 -    -4  -4.94243   GCAAAAAAACTAAAA              GAGCGTC TTT GACG-TC              TAGCGGGCAGTATTG  74 193
ISU55_RS14100 3107307 .. 3107331 -  -6.4  -4.31085   TATATTAATCTAAAA          CAGGCATGGC GGATT ACCACACCTG          TTTTTTTACTAACAG  72 198
        urtA 3105668 .. 3105699 - -10.9  -4.57837   ATATGTGGTGAAAAA      GAGCTGACGTCAG ATCCCG CTGACATCAGCAC       GTCACAGCGATTACC 100 85
        urtB NONE
        urtC NONE
        urtD NONE
        urtE 3101338 .. 3101354 -  -6.5  -3.70076   CTAAATGGAGCTAAA              TCGCCAC CAA ACGGCGA              ACATCATCATGTTCC  63 4
ISU55_RS14070 NONE
ISU55_RS14065 3098733 .. 3098751 -  -8.1  -3.83026   TGGCGTGATACCAAA             GGCTGGC TCACC ACCAGCC             ACTGACATGACTCAT  72 196
ISU55_RS14050 NONE
ISU55_RS14045 3093742 .. 3093754 -  -5.5  -2.71322   CCAACCCACACAGGA                TGAGC AGC GCCCA                ACACAGAGGATCTTT  49 124
ISU55_RS14040 3093024 .. 3093040 -  -2.9  -3.24188   TGATAGCATCATTAA              TCCGTTC GGG GAGCAGA              AAGAGAGTGTCGTTC  46 5
        adiC NONE
ISU55_RS14030 3088455 .. 3088474 -    -5  -3.61404   GTAGCAATTATATAA            CACGGT-TG TTT CATACCGCG            AACGGACTATAATTC  57 395
        dinG 3083221 .. 3083245 -  -5.5  -3.06796   CCTGATTTCAGCGAA          CCGCCACTGAC ATT GGAAGGGGCGG          CAGATCATTGGAATC  51 311
ISU55_RS14000 3080882 .. 3080909 -   -15   -4.0342   CGTAAGCAATAATAA        GGGCGCATATCCT GAT AGGA-ATGCGCCC        TTTTCCGTCAGCCCA 100 237
ISU55_RS13990 3077797 .. 3077818 -   -13  -3.20207   AATAGCACTCATTAA           CCAGGCGC TATTCC GCGCCTGG            GCTAAATATTAACAT  95 51
        gyrA 3069107 .. 3069152 -  -7.8   -5.3236   ATAACCGATAAAAAA GCCAGCTCAGT-TGCTTAAC TGATGGGC GTTAAGCTCACTG-GCTGGC TGTTTTTTAATGACA 100 114
        rcsC 3065843 .. 3065854 -    -3  -4.35017   CAAAAAGGGAAGAAA                TTCA CTCC TGAA                 AGCGTAGCCAAACTA  61 351
ISU55_RS13930 3059315 .. 3059340 - -15.5  -3.78934   TTCTGGGCACAATAA         GAAACGCGGCC GAAT GACCGCGTTTC          TCTCAGGACTCACAC 100 53
ISU55_RS13925 3058608 .. 3058628 - -12.5  -3.76219   AGCTCACAATAAATA            TCCTCCGGC ATA GCCGGAGGT            TTTTCATATGCGCCT 100 105
ISU55_RS13920 NONE
ISU55_RS13915 3058073 .. 3058097 -  -9.4  -5.15526   AGAGAAAAGCAAAAA          CCCGTTATCT TATTC AGATAACAGG          TTTTTAATTGGTGCC 100 34
ISU55_RS13900 3053402 .. 3053416 -  -9.2  -3.09516   TGGTGCAGGAGTCAA               CGGCCG CTT CAGCCG               CCTTACAAGCTCAGG  65 155
ISU55_RS13875 3048115 .. 3048132 -  -5.7   -4.2354   CAAATTTTAAAATAA             TGAATTT ATGA AAATTCA              ATTTAACTTAATGTT  68 126
ISU55_RS13870 3046521 .. 3046536 -  -6.8  -3.97947   CGGAGTGACCAGAAA              GCTACC GTCA GGCAGC               TTGACGCTAATATTG  69 207
ISU55_RS13860 NONE
ISU55_RS13855 3044372 .. 3044398 -  -8.1  -5.30189   TATAAGATGAAAAAA        GACA-GCCACAC CGAA GTGTGGCCTATC         ACAGTTAGCTATACA 100 54
ISU55_RS13850 3043432 .. 3043468 -  -5.2  -3.50877   TCACCCGATAAAAAT   GAGCGACGCCTGACATC AATA AATGTCAT-CGTGGCTC    TCCTGATTAATAATG  57 63
ISU55_RS13845 NONE
ISU55_RS13840 NONE
ISU55_RS13835 3041144 .. 3041159 -  -2.4  -3.57144   TTTTTTATGGTTAAA              CGGCCG CTTG CAGGCG               GAATTGATTGAGAAC  47 5
ISU55_RS13830 NONE
ISU55_RS13825 3040387 .. 3040428 -  -8.7  -2.54193   CACCACCTTAATCCA CTGTAGGTCAGGGACCAGGC ATC GCCCGGCCCCC-AGCTATAG TAGTAAGTGACGTCA  65 45
ISU55_RS13820 3038609 .. 3038622 -  -9.5   -5.4387   ACAGAAAGTAAAAAA               CCCGC TGGA GCGGG                TTCGAGGTTATTGAC 100 237
ISU55_RS13815 NONE
ISU55_RS13810 NONE
ISU55_RS13805 NONE
ISU55_RS13800 NONE
ISU55_RS13795 NONE
ISU55_RS13790 NONE
ISU55_RS13785 3033270 .. 3033286 -  -4.4  -2.74488   TAATGACCCGAAGTA             CTTGGCG TGGC CGCCA-G              ATAGACACACTGAAA  46 43
ISU55_RS13780 3032314 .. 3032331 -  -9.8  -3.15999   TTTGTAGATAGCTAA             CCGGGC GTAATT GCCCGG              TATATTTATTAATTC  74 122
ISU55_RS13775 3031128 .. 3031138 -  -5.4  -3.54638   ATAACTGCGGGCAAA                 TAGG TGC CCTA                 TAAATGGAAAGTATC  57 277
ISU55_RS13770 3029596 .. 3029617 - -12.3   -4.8143   GTAACAAGGTAAAAA           CCGCTCACC AAAG GGTGAACGG            CCTTCTTGAATTCAA 100 71
        yejK 3022567 .. 3022596 - -18.1  -3.28712   GTTTTCTGGGCACAA       TAAAAAACGCCGC TGAT GCGGCGTTTTTTA        TTGGCTAAATACGCA 100 51
ISU55_RS13720 3021861 .. 3021885 -  -9.9  -4.42806   GGACGCCGAAATAAA          TATCCTCCGGC ATA GCCGGAGGTTT          TTCATATGCGCCTAT 100 103
        rsuA 3018397 .. 3018413 -  -7.9  -3.42841   ACAATCTCATTACAA              GTGTGGG GCA CCCACGC              TGGCGATCTCTTCTG  68 3
ISU55_RS13700 3016735 .. 3016751 -  -2.2  -4.37763   GTAGCGAAAAAAACA              CTCAGG GTGAA CCTTAG              GGGTAAGGCTCATTA  58 347
ISU55_RS13695 3015725 .. 3015746 -  -5.8   -4.9792   TAGCCTAGACAAAAA           TGCCCGCG ATAGCA CACGGACA            AACAGCTAAAAAGTA  82 41
ISU55_RS13650 3003457 .. 3003489 - -15.1  -2.75975   GCTTAAGACACACGA      CGATGAGCTGAAT CAAGGCT ATTCAGCTCATCG      GTATTGTTGGCGTTT 100 127
        uxuA 3000150 .. 3000162 - -10.5  -3.05844   CTCTCTACGTTAAGA                GCCGG AAA CCGGC                CCTTAACGGTTATCT  76 60
ISU55_RS13625 2997502 .. 2997516 -  -5.6  -4.14243   CAGCCGATCGTAAAA               GCGCAT TTA AGGCGC               AGTCACCGCTTCCAG  68 17
ISU55_RS13605 NONE
        xylB NONE
        rpiA NONE
ISU55_RS13590 NONE
ISU55_RS13585 NONE
ISU55_RS13580 2986089 .. 2986108 -  -4.9  -3.62597   CGCATTGTGTAATAA            CCTCGCG ACCTGG CGTGAGG             AAGGCAAACATACCG  54 362
        fruB NONE
        fruK NONE
        fruA 2981748 .. 2981773 - -13.4  -5.30686   AACACCCATAAAAAA         TGCCAGTCAG AATTAA CTGACTGGCA          TTTCAGACTGCTGAC 100 84
ISU55_RS13555 NONE
ISU55_RS13550 2979974 .. 2979996 -  -6.4  -3.01912   GCAGACCTATAGATA           GAGAAAATAA ATC CTATTTTCCC           CGAAACACCAGTTTC  56 407
        psaA 2979311 .. 2979344 - -14.1  -3.70836   AATAACAAAAACATA     CATAGAACATGACAG CAAG CCATCATGTTCTATG      ATTACTCGTTATTTA 100 38
        psaB 2978360 .. 2978395 -  -9.4  -2.56908   AATTGAACTATTAAT    TTTTTCAAAATAATACC CCA GGTATT-TTCTGAAAAA    TATAAATAGAAACTT  68 39
        psaC 2975777 .. 2975801 - -11.4   -4.4715   TTGTAACGTAGAAAA          TGCCCGCCAG TAAAC CTGGCGGGAA          TTGAACCTGACGGGA 100 78
ISU55_RS13520 2971899 .. 2971922 -  -3.1  -4.41633   CACCCTTAAAAATAA          GGCGGGATT GTAACA AATCTCACC           GGCTCGGATAGCCAG  63 231
ISU55_RS13515 2970309 .. 2970328 - -12.2  -4.01902   ATAGGCACTAAAGAA            GGGCGATA GCGT TATCGCCC             TTTCATCCGCACGTT 100 56
        yiuA NONE
ISU55_RS13505 NONE
ISU55_RS13500 2966672 .. 2966691 -  -5.7  -4.07568   TTTTTCTCGCGAAAA            CACC-GCC TGACG GGCAGGTG            AGAAATATCATTTGT  66 200
ISU55_RS13495 2964385 .. 2964433 - -12.8  -3.04517   ATTGCTGGTCAAAAT CCCGAATCACTTACTTATT-TTA AAGT CAACAACCAGTAAGTGATTCGGG TAAGTGCGCTCAGCT  95 201
ISU55_RS13480 2961227 .. 2961280 -  -3.7  -3.08679   TGCGCGCAGCTAACA CCCCTACCACTTCAAGGACCAAGGG CATG CCCAAAGTTATTGGAGTGGTAGGTA GGCAGCCAGCAAACG  48 106
ISU55_RS13475 NONE
ISU55_RS13470 NONE
ISU55_RS13465 NONE
ISU55_RS13460 2956955 .. 2956996 - -24.1  -3.86346   TTATCCCCTGAGAAA CATCCTAAAAAGCGCGATA GTCA CATCGCGCTTTTTAGGATG  TTATGGATTTTTAAG 100 147
ISU55_RS13420 NONE
ISU55_RS13415 2946744 .. 2946773 - -11.3  -2.96792   AAATAGAGAAAATAG       CCGCGTGCCGCTG ATAT CTGCGGCACACTG        TCTTTATTCGGACAC  83 88
        potF 2945172 .. 2945186 -  -3.5  -3.97209   TGAATGAACAGTAAA               GTACG TCAGC CGCAC               CCTATCCATTCATCA  58 48
        potG 2943905 .. 2943916 -    -3  -3.61652   TCCCCAAACAATTAA                TTAG CTCC CTAA                 AACCACGCAACTGTC  51 14
        potH NONE
        potI 2942016 .. 2942039 - -15.4  -3.30124   TGTTATCTCTCACAA          TAACGCCGCT CTAA AGCGGCGTTA           AAGGAGACGAAAGAC 100 59
ISU55_RS13390 NONE
        rlmC 2939763 .. 2939780 -  -4.1  -3.84451   GCCCCGAAAGGTAAA             TTCAGCA CTTT TGCTGAC              CTGAAAGGCAAAAAG  57 515
ISU55_RS13375 2938773 .. 2938786 -  -2.3  -4.86621   ATTTTTAATGAAAAA               CTCCC GAGC GGGAT                AATAAAAAATCACTC  66 173
ISU55_RS13370 2937603 .. 2937638 - -11.8  -5.35459   ACAGATGATAAAAAA    GCCCACTACACCACGA ATCT CCATGGGGAAGTGGGC     TTCAGATTTATTGAT 100 54
ISU55_RS13365 NONE
ISU55_RS13360 NONE
ISU55_RS13355 NONE
ISU55_RS13350 NONE
ISU55_RS13345 NONE
ISU55_RS13340 NONE
ISU55_RS13335 NONE
ISU55_RS13330 2931172 .. 2931208 -    -8  -2.59564   CCCTTATGCGACAAC    GCCGGATCATCAACCA GAAAT TGCGTGATGATCCGGT    TTCCTTAACGCCCCG  58 153
ISU55_RS13250 2914481 .. 2914498 -  -2.7  -4.29738   TCATATCTATCAAAA             TTGGC GTTATCGG GCCAA              GAAAAAAAATAAATT  61 367
        macA NONE
        macB 2910286 .. 2910307 - -10.9  -4.18494   TACTTTGATTCAAAA           TGCCAGTCA ATGA CGACTGGCA            TTTTTATTTTATCTA  93 176
        clpS NONE
        clpA 2906790 .. 2906817 - -10.7  -5.18726   TGGGCACAATAAAAA        GGGCGATACGCT GTTTT AGC-TATCGCCC        TTTATTTTACTGGAT 100 139
ISU55_RS13215 2906080 .. 2906100 - -12.5   -3.6761   CGTTGGCAATAAATA            TCCTCCGGC ATA GCCGGAGGT            TTTTCATATGCGCCT 100 105
         lrp 2898236 .. 2898262 - -15.2  -3.14463   AACGGGTCTGAGCAA         CAACGCCGAGAA GCC TCCCCGGCGTTG         AAACTGTATGAATAA 100 83
ISU55_RS13180 2894276 .. 2894290 -  -5.7  -3.52204   CTACCGCGAAAGTAA               CCCAT TACTC ATGGG               GTGGTGGTGCCAGAA  59 15
        lolA NONE
ISU55_RS13170 2892076 .. 2892096 -  -5.5  -4.09108   CGTAAGCGATATAAA            CAACCACTT ACC AAGTAGTTA            TAATGCTAACCTTAC  65 54
        serS 2890478 .. 2890500 -  -4.9  -5.76633   GGATACACAAAAAAA          GAAAAGCGCC CGTA GACGCTTT-C           GAAATAGCAGATAAC  95 116
ISU55_RS13135 2884572 .. 2884592 - -11.1  -3.97088   TGTTACAACATGAAA            GGCTCCACA TAT TGTGGGGCC            TTTATTCATTCAGAG  90 89
        ansB 2877654 .. 2877681 - -13.6  -3.53343   AATGTCTGGCGGAAA        TTTTGCGAAGAC CGTA GCCTTCGCAAAA         AAGTCACAGTATCAA 100 37
ISU55_RS13110 2876338 .. 2876348 -  -3.2  -3.40867   TTATTCATTAATTAA                 TGCC AAA AGCA                 AAACCCGCTGCAACA  49 7
ISU55_RS13105 2874346 .. 2874360 -  -8.6  -3.86015   GACTGGGGTGACAAA               TCTGCT GGG AGCAGA               TTTGAACGCTGCTTG  75 127
        serC 2872968 .. 2873015 -  -9.8  -3.02511   CTCATTGTTGCAAGA GGCCCATCGATCCGGAGCGGAT GAGT ACCCGCTCCAGAAAAATCAGCC ATGGCGGCGTTCAAA  73 20
        aroA 2871273 .. 2871307 - -15.9  -3.64703   CTTTCGGTAGGCAAA    CCTCT-TGTCTGCCCC CGGC AGGGCAGACACAGAGG     TAGCATTATACGCTG 100 279
         cmk 2870510 .. 2870520 -  -2.6  -3.68936   TATTAATTTTAATAA                 TTTT TAA AAAA                 ATCGTATTGAGAGCG  50 61
        rpsA NONE
        ihfB 2868299 .. 2868318 -  -7.1  -5.81412   TTTACGCAAAAAAAA            CGATGCC GATAAG GGCACCG             TTTCGTATCAGCGTT 100 71
ISU55_RS13075 NONE
        msbA NONE
        lpxK 2862686 .. 2862717 -   -11  -3.18681   CTGCAACTCTACGAA      GCA-ACCCAGCAACG TTC CGTTGCTGAATGTGC      AGCCGCCCTCAAACT  76 67
ISU55_RS13055 2860344 .. 2860364 - -12.6  -4.00468   ACGAGAAGGGAGAAA            CGGCTACC GATGA GGTAGCCG            TTTGCTTAGAAAGCG 100 31
ISU55_RS13050 2859630 .. 2859645 -  -2.6  -2.90075   CGGGCGGGAATTATA              GCAATGA AAC TCA-TGC              GTGCTTCTCATCAAT  42 20
        kdsB 2858846 .. 2858870 - -12.1  -4.15703   GGTTAGAAATAACAA          CGCCAGAGCCC GGT AGGTTCTGGCG          TAAAGTTTCCGTCGC 100 46
ISU55_RS13040 2857217 .. 2857228 -  -4.4  -3.53733   GTTAGCTGATAAAGA                GTTG GCGG CAAC                 CGTGTCAATCCCCAG  52 432
        cmoM NONE
        mukF NONE
        mukE NONE
        mukB 2849492 .. 2849510 -   -16  -3.07307   GAAAGCTTTACTGAA             CCCCCAGC CTA GCTGGGGG             TTTTCTGGGCACAAT 100 110
ISU55_RS13015 2848815 .. 2848847 - -11.3  -5.26918   AGATGTTACAAAAAA      TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA      TATGCGCCTATAAGG 100 99
        ldtD 2846669 .. 2846681 -  -2.6   -4.7254   ACCGCCTATGAAAAA                GCAG TCAAC CCGC                ATTCACTGTGCGTTA  64 125
ISU55_RS13005 NONE
ISU55_RS13000 2845180 .. 2845205 - -12.7  -3.53929   AAACGAAAGAGAACA         CAAAAGACGCC TTCC GGCATCTTTTG          CTATTGAACATTCAT 100 121
        pepN 2835400 .. 2835413 -  -2.3  -4.70879   GGCAAATCGTAAAAA               CACGG TATT CCCTG                CATTAAATTCCCTAC  63 227
        pyrD 2833840 .. 2833852 -  -4.1   -4.1043   TTGAAATATCATAAA                CTCAA TAG CTGAG                TTCTAGACCCATCGA  61 160
ISU55_RS12960 2833152 .. 2833168 -  -2.9  -3.87608   TGCACTCAAAAAAAG              CGCCGTT GGT AACGATG              GAACCATTCTTTGTT  54 110
       rlmKL NONE
ISU55_RS12945 NONE
        pqiA NONE
        pqiB NONE
        pqiC 2824282 .. 2824323 -  -5.9   -4.3851   GATATTAAATAGAAA CCCCCTTCCCCTGACAAGA TGAT TATTACCAGAGAAAGAGGA  TTAGACTGATTTAGA  70 49
         rmf 2823864 .. 2823882 - -11.7  -4.48987   TGGGCACAATGAAAA             CCTCCGC CTAAT GCGGAGG             TTACCCTTGATAATG 100 53
ISU55_RS12920 2823148 .. 2823180 - -11.3  -4.72631   ACTAACGCAATAAAA      TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA      TATGCGCCTATAAGG 100 99
ISU55_RS12895 2819231 .. 2819261 -  -6.3  -4.15453   CAATGCATTGTAAAA      TAAGGCGAATATGA TTAA TCATGT-CGCCTTA       TTGTTTTTACGTGAT  69 234
        matP 2816112 .. 2816130 -   -16   -4.8048   GGCGCATATGAAAAA             CCTCCGGC TAT GCCGGAGG             ATATTTATTTATCCT 100 95
ISU55_RS12860 2812502 .. 2812520 - -11.7  -3.09933   GCCTAAGGTACCCAA             GGGCCAC CCATC GTGGCCC             ATTATACGGTTTCAT  84 99
        helD 2807578 .. 2807598 - -16.9  -2.58183   AAAATAGGTAACTCA            CCCGGTGGT TCA ACCACCGGG            TTTAGTATTGAGCAT 100 57
ISU55_RS12830 2805355 .. 2805378 -  -7.4  -3.29471   CCTTCATTAGATGAA          CTGGCGGC CTCGATTC GCCACCAG           TTACAGGCTCCGCAC  61 161
        yccX 2803396 .. 2803417 -  -5.9  -3.53012   GCGGGGCTTCCTAAA           CCGGTTAAA TGCA TTTAACCTG            CGGAACATCGCGCAA  59 73
ISU55_RS12805 2802508 .. 2802520 -  -3.4  -2.70528   ATCAGCCAGATACCA                GCAA ACACA TTGC                ACGATGATATCGACG  42 261
ISU55_RS12780 2795088 .. 2795100 -  -4.9  -3.43007   ATTATTTAAAATATA                CATAT CAA ATATG                GTTTTTATTCATATC  55 98
ISU55_RS12775 NONE
ISU55_RS12770 2793104 .. 2793117 -  -2.4  -5.07486   CACCGCTAATAAAAA               GGTT CATGTT AACC                ATGATATCGACTAAA  68 20
ISU55_RS12765 NONE
ISU55_RS12760 NONE
ISU55_RS12755 NONE
ISU55_RS12750 NONE
ISU55_RS12745 NONE
ISU55_RS12740 NONE
ISU55_RS12735 2788017 .. 2788034 -  -4.8  -3.03124   TTTCAGTTCTGAATA             TGGCCC CTCCGT AGGCCA              TAGTGCAGAAATGTC  50 40
ISU55_RS12730 2786680 .. 2786697 -  -5.7  -3.60525   TTTATCGATAGATAA             TTTTCTT GAAT AAGAAAA              TAGGCTAAAAAATGG  61 430
        tssB 2785600 .. 2785617 -  -2.7  -2.89447   TTCTAATGACAAGCA             GCCAATC CCGG GATTAAC              CCTCTTTTGGCGCCA  42 21
        tssC NONE
        tssK NONE
ISU55_RS12710 NONE
ISU55_RS12705 NONE
ISU55_RS12700 2779523 .. 2779542 -  -9.2  -5.72118   AAAAAACACAAAAAA            GCAGGCGG CGAA CCGCCTGA             AGTTGATGACAACGT 100 231
        tssH NONE
ISU55_RS12690 NONE
ISU55_RS12685 NONE
ISU55_RS12680 2771125 .. 2771136 -  -5.8  -3.14132   CTCGTTGGCGAGTAA                CTCC ATCC GGAG                 CCGGAAGTTAATAAG  55 173
ISU55_RS12675 NONE
ISU55_RS12670 NONE
ISU55_RS12665 NONE
ISU55_RS12655 NONE
ISU55_RS12650 2761205 .. 2761220 -  -7.6  -2.78384   TTGGGGGGGATGATA              GAAGAC ATCA GTCTTC               TGCCATGTCTTCATC  61 17
        tssA NONE
ISU55_RS12640 NONE
ISU55_RS12635 2757845 .. 2757876 -  -5.3  -4.15143   AACTAATCAGATAAA      GAATGGCTTAATT GCGGAG AATTAATCCACTC       TAATAATGCCTTTAA  65 170
        tssF NONE
        tssG NONE
        tssJ NONE
        tssE NONE
ISU55_RS12610 2752440 .. 2752479 - -11.4  -3.66883   TTAATACAGTTTAAA  GGTCGCGCTC-CAGCAGGA TCA CCCCGCTGTGAGCGCTATC  ATTAATTAATAATAT  90 134
ISU55_RS12600 2749431 .. 2749449 -   -11  -5.80248   GAAGACATAAAAAAA             GCTGACGC ATA GCATCAGC             TTTTTTTGTTAGGTC 100 51
ISU55_RS12595 2748155 .. 2748166 -  -3.6  -4.02022   TGGAAGGACTATAAA                GCCG TCAC CAGC                 GGTTTGAAAATGGTG  59 453
ISU55_RS12535 2733880 .. 2733908 -  -3.7  -3.80276   ATCCAGATAAGACAA        GCATGATGCGGGT CAC ACCCGAATTTCGC        TCTCACTCTAATTGA  56 142
        folE NONE
ISU55_RS12525 2731514 .. 2731531 -  -6.3  -4.15044   GGCGTTGTTAAGAAA             CTGTGAA TTTT CTCACAG              ATTGAAACCGGTTAC  69 452
        mglB 2730128 .. 2730169 -  -8.8  -2.66291   TATATAGCCATAGTA TTTGACGCTACAGGAGGAC CAGTT GCCCTCCTGCA-CGCCAAT AATTTTGGGTCTATA  66 74
        mglA 2728475 .. 2728486 -  -4.4  -2.99433   CAACTAGATTAGAGA                TGCA AGGA TGCA                 AGGCGTAATATTTCA  47 7
        mglC 2727018 .. 2727028 -  -4.6  -4.04397   AGGGCGACAAAAATA                 CCGA TAA CCGG                 TCTCGAGAACCACCT  61 434
ISU55_RS12465 2716082 .. 2716108 -  -8.7  -4.77165   CTGGGCACAACAAAA        TGCCGGTCTGGG GTAA CCCT-ACCGGCA         TTTTTATGATTGAAA 100 66
ISU55_RS12460 2715367 .. 2715399 - -11.3  -4.43208   AGATCCTTAAAGAAA      TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA      TATGCGCCTATAAGG 100 99
        apbC 2711701 .. 2711713 -  -4.8  -4.09108   GTGAAGGGAGACAAA                GCAC ACGAA GTGC                TTCGAGCGGCAATTA  63 217
         udk 2710997 .. 2711009 -  -3.3  -4.05322   AAACTGTCATATAAA                GGAGC AAA GGTCC                AGACGAACGTTACTC  56 35
         dcd 2710191 .. 2710218 -  -4.8  -4.63592   TCTCAATAAAAAGAA        TGACTAGTCCAG ACTG CTGACCAAGTCA         AATGAAGGGAAAGCG  71 140
        asmA 2708199 .. 2708234 -  -8.3  -4.85782   GCCTGGAAAAATAAA    TGATTAGGCCCGGTGG AGAAA CCATCGGGCCTA-TCT    CTTTCCACTACCTAT 100 81
        fhuF 2705282 .. 2705310 -  -7.5   -3.9751   AAATAAAGAATACAA        CCAAGTTTCTG TCTAATG CAGGAACTTGG        CTAACTAATAAGATT  72 26
ISU55_RS12420 2703606 .. 2703621 -  -6.2  -3.59252   CCTGATCAAACAACA              TCAATC TCAT GATTGA               CTGTTATAGAGAGTC  63 16
ISU55_RS12415 NONE
ISU55_RS12410 NONE
ISU55_RS12405 2699768 .. 2699784 -    -5  -3.53444   TCATCCGCCCTGAAA              GGCTCC TCAAC GGTGCC              GGTCTATTGGTTTAT  55 101
        galU NONE
        galU 2688478 .. 2688493 - -10.4  -4.01603   TAGGCAAAGAGCAAA              GCGCCA CAAA TGGCGC               GGCCTAAACTGCCAA  89 104
        gndA 2686606 .. 2686630 -   -10  -5.42259   TCACTGGCAAAAAAA          CGCCTCCAAC TTATC ACTGGAGGCG          TTTTTATTGGGCAGC 100 172
ISU55_RS12310 2677649 .. 2677666 -  -4.1  -3.46811   TATATCAGCAAAAAT             GGCGAAT CAAA ACTCACC              GTTATGAAGTGTATC  50 255
ISU55_RS12280 2673018 .. 2673043 -  -7.6  -6.15259   GAATGCAAAAAAAAA         TAACCGACGC GTTTAA ACGTCGGCTA          TTTCATTCGGCGTAT 100 135
ISU55_RS12275 2671246 .. 2671269 - -11.8  -5.47159   TCTGAATACAAAAAA          TCCGGCAACAG AGA CTGT-GCCGGA          TTGATAAACTTAATG 100 58
ISU55_RS12260 2667555 .. 2667570 -  -3.2  -3.15544   GGCTAGGTTCAGTAA              CCCGAA TTAT TTAGGG               GTGAGTCAACGCTAT  46 188
ISU55_RS12255 2666903 .. 2666925 - -11.3  -5.16841   GCACACCAATAAAAA           GGGCTGACA ATAGA TGCCAGCCC           CACTCTCTTTCCCCT 100 82
ISU55_RS12250 2665139 .. 2665161 -  -6.2   -2.7317   ACACAGGTGCAATTA           CGCTTCAGGA TAA TCCTGGAGGG           AAAGTGACCATTACG  51 267
ISU55_RS12240 2659746 .. 2659759 -  -3.8  -3.11476   ACTGATTGAAAATCA               GCAG GTTTAT CTGC                GTTCCGAGGCTATCT  46 225
ISU55_RS12230 NONE
ISU55_RS12225 NONE
ISU55_RS12220 NONE
        lldD 2654663 .. 2654677 -  -4.9  -2.99871   TGTCACAGTAAATCA               GGCCG GTATT CAGCC               AAATCATCAGACAGC  50 86
ISU55_RS12205 NONE
ISU55_RS12190 NONE
ISU55_RS12185 2646921 .. 2646944 - -13.2  -4.15998   AGCCAAATTAAAGAA          CCCTGCCTAG GTAA CTAAGCAGGG           TTTTTGCATTTCAGT 100 337
ISU55_RS12155 2640920 .. 2640947 -  -4.7  -2.71001   CAGCCGTAAATTAAC        CTCAGGCCGCC GTTTAT GGCGGCCTACT         TTGCGTCCAATGGGC  44 383
ISU55_RS12135 2635905 .. 2635941 - -12.6  -2.87881   TAAGTTCGTCACACA   TCCGAAACGTTT-AGAT TTAA ATCCGAAACGTTTCGGA    TCTACTCTAATGCCG  89 288
ISU55_RS12125 NONE
ISU55_RS12120 2632666 .. 2632696 - -19.8  -3.64703   GGTGCTTTACTGAAA       TCCCCCGGCGATTT GAT ATATCGCCGGGGGA       TTTCTCATTTATCGC 100 356
ISU55_RS12100 2626988 .. 2626999 -  -4.4  -3.86202   GCCTATGACATGAAA                CTCA CGGG TGAG                 CAGGGTTTTAATTTA  59 403
        pgeF 2625095 .. 2625110 -  -7.5  -4.56597   CGTTTGCTGTAAAAA              CCCGC CTTTGT GCGGG               TTTTTTCATATTTGG  78 81
        pagP 2623037 .. 2623069 -  -9.4  -3.33696   TTCGCCCTCAACCAA      GCATATAACCAT TTTAATATT ATGGTTATATGC      TGTTTTTTAGTTAAA  74 62
ISU55_RS12045 2618739 .. 2618753 -  -5.6  -4.19624   TATGTTGAATATAAA               TGCGTC AGT GCCGCA               GTATAATGCCTCCAT  68 456
ISU55_RS12035 2617788 .. 2617808 -  -5.4  -2.74012   TCATCAGCGTAATGA            TGCACAAC TTATT GATGTGCA            GAACTGTTATAAAGA  50 129
ISU55_RS12025 NONE
ISU55_RS12020 NONE
ISU55_RS12015 2613731 .. 2613752 -  -2.3  -4.29738   CCACATGCATTAAAA           GAGAG-AACA GTA CGTTTCCCTC           AATCTGAACTTATCA  58 90
        mtfA 2612542 .. 2612556 -  -5.6   -2.8005   AAATAGAGGGTAAAT               CGCAAC AAC GTAGCG               CCAGCCCAAGGTTTT  53 84
ISU55_RS12005 2612327 .. 2612350 - -11.8  -5.15526   ATAGAAAAGCAAAAA          TCCCGCTTAG TTTC CTAAACGGGA           TTTTCTAAATTTGGC 100 37
ISU55_RS11960 2603632 .. 2603659 -   -17  -3.62046   GTACGTTGTCAATAA        CCTCAGGGGAGC CGAA GCGCCCCTGAGG         TTCCACTCTCTGCTT 100 39
ISU55_RS11950 NONE
ISU55_RS11945 NONE
ISU55_RS11940 2599914 .. 2599949 -  -2.5  -3.06183   TTGATTGCGATTTAA    CCCGCGGCGATGATGT CTGTT ACATCCCC-CAACGGG    GGATCGGATGCTCCC  43 9
        hpaD NONE
ISU55_RS11930 NONE
        hpaH 2597733 .. 2597750 -  -2.6   -3.3062   TGGAAACATCACTAA             GCCCCT AAACAA AGTGGC              AACTTATGGCACCTA  46 12
        hpaI 2596900 .. 2596916 -  -3.7  -3.40899   AATCGCTCATGATAA              TGTCC TCGATAC GGACA              GGGTTAATATCCACC  51 29
        hpaX 2595483 .. 2595516 -  -2.4  -4.72007   CGTCATCAAAATAAA    GACCGGCTCGCTGACA TTCT TGTCGGCGTG--GGTC     CCTTAGCCCATTAGA  63 36
        hpaB NONE
        hpaC 2593338 .. 2593377 - -15.2  -3.62046   GCACTTTGTCAACAA  CCTCTAATGCACGTCA GTTAAATA TGACGGGCATTAGAGG   TTTACACCATCACCG 100 27
ISU55_RS11885 2588543 .. 2588570 -  -8.5  -4.49958   ACGCTAGCAAATAAA        TAAACCCGCCA TTCAGC CAGCGGGTTTA         TTTTTATCTATCAAT  87 88
        dbpA NONE
ISU55_RS11870 2585212 .. 2585234 -    -2  -2.64155   TTCTGCCGAAAGTGA           GCAAATTAAG CGG CTTGATTTTC           TTCAGGTTTACTTTT  40 8
ISU55_RS11865 NONE
ISU55_RS11860 2584259 .. 2584279 -  -9.7  -2.83112   ATTGAATTGACCAGA            TGGAGGGCA ATA TGCCCTCAA            ACATAGCGGGTTATT  72 98
ISU55_RS11855 2581730 .. 2581747 - -10.5  -3.05384   CGTTTCGTGAGTTAA             CCCGCCA TTAT CGGCGGG              TTTTTTATTGTTCAT  76 269
         pip 2580268 .. 2580298 -  -6.1  -3.62478   GAAGTAATCGTGAAA      TG-CTCCCGTAGGC CTTA ACCCGCGGGAGTCA       GTCGCCTTAAATGCG  63 46
        ftnA 2579070 .. 2579098 - -10.3  -4.47456   ATAGGCAACAACAAA        GCCGCAGTACC CAATAAT AGTACCGCGGC        GAATATTTTCTCAAT 100 46
        yobA NONE
        copD NONE
ISU55_RS11825 2576746 .. 2576773 -  -7.8  -5.77856   AATAAATTAAAAAAA        GACCGAATACGA TTCC TGATATTCGGTC         TAGGGAAATGGCTCT 100 254
        flhB NONE
        flhA 2571932 .. 2571944 -  -3.4  -2.54098   GGCCCGAATCAACAT                TAGG CGGAT CCTA                TCGTCGAGGTCATAC  42 12
ISU55_RS11800 2571131 .. 2571141 -  -2.6   -4.8048   TGGGCAGATTAAAAA                 TATT CAA AATA                 TATAATAAAACAGTC  67 393
ISU55_RS11790 2569287 .. 2569319 - -11.3  -4.26076   TTATCTTTACCAAAA      TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA      TATGCGCCTATAAGG 100 99
        flgB NONE
        flgC NONE
        flgD 2563672 .. 2563688 -  -5.9  -3.71321   ATGAAAGCCTAACAA              CAGACTT ATA AAATCTG              GCGCACTTCATCCAG  61 14
        flgE 2562126 .. 2562136 -  -6.8  -2.91681   CTGCAACTCCAGAGA                 CTGC CGG GCAG                 CCCCCATTGCGGTAT  58 78
        flgH NONE
ISU55_RS11730 NONE
        flgJ 2557820 .. 2557832 -  -6.3  -3.45433   AGTGTAAAAACCCAA                CCTAT CCA ATAGG                CGTTATTGTCGCAGA  61 151
        flgK 2555348 .. 2555370 -  -5.5  -3.45366   CCTGGAATGAATTAA          GCGCGGCGCA TGAT TGC-CCTCGC           AGGCAATAATATCGT  57 78
        flgL 2554268 .. 2554293 -  -7.6  -3.02144   TGACCCGTGCGAAGA         CCCCGTAG GCTGTGTGTG CTACGGGG          TTAAGGCCGATTACG  62 36
ISU55_RS11705 2550863 .. 2550882 -  -2.8  -3.33261   TTTGAACTTTCATAA            CAGTTTGA ACCC CCATACTG             TTTGAATTACGGTAA  46 133
ISU55_RS11700 2549774 .. 2549787 -  -2.3  -3.13403   TTTCCCCCAGGAACA               CCGCT CATC AGCGC                ACGGGGGATTGCACT  43 19
ISU55_RS11695 2548695 .. 2548705 -  -6.8  -3.14931   GTGATCCTCCATCAA                 CACG CCC CGTG                 CCACTTAAGCGGCAT  59 63
ISU55_RS11690 NONE
ISU55_RS11685 NONE
ISU55_RS11680 2544934 .. 2544948 -  -2.8  -3.11072   CGCATTGAACATATA               TCACTC ATC AAGCGA               GTTAAGATAAGGGGC  44 144
        fliE NONE
ISU55_RS11595 NONE
ISU55_RS11590 2531280 .. 2531291 -  -2.2  -2.63073   TCCCTTCAACAATAT                CTGCC ATA GGC-G                TCTATTTACACCTTA  40 31
ISU55_RS11585 2530775 .. 2530790 -  -6.1   -4.8066   AAGATAACGCAAAAA              CCCAC AGCTAA GTGGG               TTGATATCTCATACG  80 45
ISU55_RS11545 2521735 .. 2521750 -  -8.2  -4.69027   AAACTGAGGTAAAAA              CCCCGC CGCA GCAGGG               TTGGAATAAGGGTAT  91 54
ISU55_RS11540 2520652 .. 2520695 -  -2.3  -2.94825   TCATCCCAATGAAAC GCTAACTACGCGTCAGTCA TCCGGG TGACTACCCCGCAGGGAGC AGATTGAACGTGAAT  42 40
        fliZ 2519928 .. 2519940 -  -3.4  -3.31144   CGTTGATGTGGATAA                GAGA TTGAC TCTC                TATACCTATACCCTA  47 64
ISU55_RS11530 2518612 .. 2518624 -  -3.4   -3.1247   ATTTTTGATATTCAA                CACT TTACC AGTG                CTATTAATGAAGTGA  46 99
        tcyJ NONE
        tcyL NONE
        yecC 2516177 .. 2516191 -   -10  -4.72272   TTTTGCCACCAAAAA               CCACTG AAT CAGTGG               TTGAGGTTATTGACA 100 182
ISU55_RS11495 NONE
        putP 2508792 .. 2508817 - -11.2  -3.37466   ATTTTACATACAAGA         TAGCCCCCTG TTATGG CAGGAGGCTA          TGTGTAGTTAAACGT  81 67
ISU55_RS11485 NONE
ISU55_RS11480 NONE
        efeB 2505174 .. 2505196 -  -7.7   -4.8667   TAGACGTCATAAAAA           GCACCGC GCGATGATG GCGGTGC           TGTATTTTAAGCTTC  91 32
ISU55_RS11465 2502837 .. 2502861 -   -10  -4.39426   CACAGTGTGATAAAA          CGGTGCCAGA GGTGT TCTGGTACCG          TTTTATTTCCCCCTC  93 110
ISU55_RS11455 2500886 .. 2500902 -    -3  -4.70921   TACAAGATAAATAAA              CCCTAT ACTGA ATAGAG              ACGGCACGAATATGA  65 91
ISU55_RS11450 2499678 .. 2499704 -  -5.9  -5.18357   CAACTGATGAAAAAA        CAGCCGCA-CAG TGAA CTAATACGGCTG         TTATTATTATATAGA  85 51
ISU55_RS11445 2498640 .. 2498650 -  -2.4  -3.63515   GGCTACCGCCAATAA                 CGCC TAG GGCC                 AGCATAGTGGCCCCT  49 511
        uvrY NONE
        uvrC NONE
        pgsA 2494527 .. 2494540 -  -3.1  -2.73994   ATTCCCGCAACATCA               GAACC TACT GATTC                TTTTGCTATCTTTCG  43 149
ISU55_RS11415 2494418 .. 2494435 -  -5.5  -3.12351   TGCCTTTACAGCTAA             GGTTCGC TAAT GCCAACC              TATTAATTTGGAGCG  53 34
ISU55_RS11410 NONE
ISU55_RS11405 2494162 .. 2494175 -  -9.5  -5.69473   TAGATCACAAAAAAA               CCGCC TCTC GGCGG                TTAACGACATACTCG 100 72
ISU55_RS11395 2492607 .. 2492617 -  -2.4   -4.3467   ATGCTCATACGAAAA                 GCCG AAT CGGA                 TCAAGGCTCCCACAT  58 479
ISU55_RS11390 NONE
ISU55_RS11385 2491390 .. 2491401 -  -5.8   -3.2396   AATTATCACCACTAA                TGGC TATA GCCA                 TATCCAATAATGAAA  55 388
ISU55_RS11340 NONE
ISU55_RS11335 NONE
ISU55_RS11330 NONE
ISU55_RS11305 2480301 .. 2480335 - -15.3  -3.88232   TCGTTTACAGAACAA    TGATGGTGCTCTTGAG CAAA CTCAA-AGCACCATCA     CGGTGCGTAAGGTTC 100 449
ISU55_RS11300 2479082 .. 2479096 -  -4.2  -3.36878   TTTATTCAGTCAGAA               TGTCAG ACC CGGACA               ATTTCGCCGGTACGG  51 13
ISU55_RS11295 2477746 .. 2477786 -  -9.9  -2.77192   AACCTGCGTAAGAAT TTCA-TTTCCGTCAGTGC GCAACT GCACTGACGGAAAGCGAT  TAACGGGACAACGCT  72 25
ISU55_RS11290 NONE
ISU55_RS11285 NONE
ISU55_RS11280 NONE
ISU55_RS11275 2474408 .. 2474425 -  -6.9  -3.86015   GAGGCCTCGTACAAA             CCCCGTC GTGT GAGGGGG              ATTTAAATTTGTAGT  67 497
ISU55_RS11260 NONE
ISU55_RS11255 2471789 .. 2471806 - -10.5  -4.80882   AGCTCACAGTAAAAA             GACGGGG TTTC CCCCGCC              TTTCTATCTTTCTAT 100 402
ISU55_RS11230 2467139 .. 2467153 -  -2.1   -2.8619   GTAAAACTCATCAGA              CCT-CC TGTT GGCAGG               CTTTCAGTACAGCCA  41 6
ISU55_RS11225 2466257 .. 2466285 -  -5.3  -4.89477   CCCGTAAGAATAAAA        GATTTGGATTACG AGC CGGAACCGAAATC        ACCCATCAAGCAGAC  76 302
ISU55_RS11215 NONE
ISU55_RS11210 NONE
ISU55_RS11205 NONE
ISU55_RS11200 2460936 .. 2460950 -  -6.4  -2.92951   CAGAGCGTCATAAAC               GGGATC ATA AATCCC               CCTCATGGCATAACC  56 15
ISU55_RS11195 NONE
ISU55_RS11190 NONE
ISU55_RS11185 NONE
ISU55_RS11180 NONE
ISU55_RS11175 2455484 .. 2455497 -  -5.9  -4.10161   CAGCAGCCTTTAAAA               CCCCG CAGC CAGGG                AACCGAACATGGCTA  68 170
ISU55_RS11160 2451756 .. 2451780 -  -5.7  -3.71353   AAATAATTTTAATAA          TGGGGTCTG GATTAAT CAGACCTCA          TAAAATTGATCATGG  61 107
ISU55_RS11150 2446667 .. 2446680 -  -4.5  -3.05384   TCTCCTCTTAGTCAA               TGAGC AGTC GCCCA                TTGAATGTGATAGTT  50 236
ISU55_RS11145 2445688 .. 2445702 -  -2.8   -3.1211   GACGATATTAGGCAA               TGATGC AGG GCATAA               TCGTCTTGGGAAGAA  44 329
ISU55_RS11085 2434511 .. 2434534 -  -5.2  -3.04144   TCTCTATCCGCAATA          TCCGCCAGTG TTGG CACAGACGAA           AAGAGAGGGAGTATC  52 51
ISU55_RS11080 NONE
ISU55_RS11075 2432948 .. 2432981 -  -8.1  -3.07935   AGCTGAGGTATCCAA     TCCCCAGTCAATTAG ATAA CTCAGTGACTGGGGT      GAGCAAGGGCAGCTA  63 38
ISU55_RS11065 NONE
ISU55_RS11060 NONE
ISU55_RS11055 2429342 .. 2429374 - -16.5  -3.63744   TCTGTCGTTAAAATA      CAAAACGCCCGATGA AGT TCATCAGGCGTTTTA      AGGCAAAAAAGTGTC 100 74
        ychH 2425696 .. 2425721 -  -8.9  -5.42975   GCAGATAAAGAAAAA         CCCGTTGAAGC CTGT GCGACAACGGG          TTTTCTGTTTTTGAA 100 62
        hemA 2421181 .. 2421191 -  -6.8  -2.75159   TTAGAGGAAACTAAT                 GCTG ATC CAGC                 CCAAGGCTGTCGCGT  57 10
        prfA NONE
        prmC NONE
ISU55_RS11000 NONE
ISU55_RS10995 2417922 .. 2417933 -  -7.2  -2.63913   CATTATGGTATACGA                GGGC TATT GCCC                 TATAAAACCGCTGCG  58 52
        kdsA 2416677 .. 2416700 -  -5.2   -5.1861   TTGATTATCAAAAAA          GGCAGCTTAG TTAC CTACGCTGCG           TGAGGTTATTGACAA  81 335
ISU55_RS10950 2408455 .. 2408475 - -12.5  -3.79611   GAAGCAGAATAAATA            TCCTCCGGC ATA GCCGGAGGT            TTTTCATATGCGCCT 100 105
ISU55_RS10940 NONE
ISU55_RS10935 2405488 .. 2405504 -  -7.3  -4.16016   GTATCCCTCAATAAA              TGCCGAT GAA ATCAGCA              AATTGCTATAACTTT  73 491
ISU55_RS10925 NONE
ISU55_RS10920 2403515 .. 2403556 -  -8.7  -3.80625   GGGTTAGAAGTTAAA CCGGGCCAATTAGTCATCC CATT GACTGACTAACCGGCACAG  GTCATTTCACGCTAC  78 470
        rimJ NONE
ISU55_RS10900 2398660 .. 2398684 - -12.2  -2.60615   ATGTGCTGTAAATAC          CAACGCCTAC GGTCT GCAGGCGTTG          CTCTACCCAATGGGG  83 229
        murJ 2396987 .. 2397003 -  -9.4   -5.1615   TCAATATGTAAAAAA              GCCCGA AATTA TCGGGC              TATATAATACATTAT 100 108
ISU55_RS10890 2394976 .. 2394988 -  -4.9  -2.61383   ACGTTGAGTTAGAAG                GTATA AGC TATAC                GGCCCAATACCTGTA  48 6
ISU55_RS10885 2389991 .. 2390004 -  -9.5  -5.07107   TAAATCGTCAAAAAA               GGCCC CTCG GGGCC                TTAAAAAACGATTAG 100 230
ISU55_RS10875 2387064 .. 2387087 -  -3.1   -2.9924   TAAATAACCCATATA          CGTTAGCGA CCGTGC TCGCTATCA           ACAATTTGGCGTAAA  44 4
        cutC 2385883 .. 2385907 -   -10  -4.80959   TAAGCCATAAGAAAA          TCCCCCAACT CACCC AGATGGGGGA          TACCGTTCGTTATAT 100 188
        aspS NONE
        nudB NONE
ISU55_RS10835 NONE
        ruvC 2377639 .. 2377658 - -12.2  -5.34555   TTATAGCATAAAAAA            GGCTGGAT GGAT ATCCAGCC             TGTGATAACAGTTAA 100 64
        ruvA 2376792 .. 2376814 -  -7.7  -2.93572   ATTCATTCTATAAAT          CG-GCGGCAT TATA ACGCCGCACG           GAGAGCATCACGGAT  62 11
        ruvB 2375579 .. 2375637 -  -9.8  -2.85803   AAAAGCACGAGGATA GTCAT-CACTTCACGCTGTGGGGTTTA GGCCTA TAACCCCCACAGCGTGAAACGTATTAT TCTTCCCGAGTAATA  72 22
        znuA NONE
        mepM 2371596 .. 2371630 - -15.2  -3.74077   GCTGACAGACTGAAA     CTAAACTGCCAGTG CTCAACT CACTGGCAGCTTAG     GGATAAACACACCGA 100 65
        lpxM 2370121 .. 2370152 - -10.8  -4.46757   AAGATAGGCAGAAAA      GCAAAGGCCCGCTA TCAC TAGCGGGCCTCAGA       CTGCTGACAAACCCC 100 314
         zwf NONE
ISU55_RS10770 2364656 .. 2364682 - -11.6  -5.03314   GTGATTCTGAAAAAA         CAAAACCCCTGC AAT GCAGAGGCTCTG         TCTTTGGTGAAAATA 100 78
        mdtJ 2363577 .. 2363592 -  -3.2  -3.09844   GCTATAGGGTAAAAC              TCAAGC TGCT GCATGA               TGCTCACCTGACTCA  46 10
        mdtI 2363215 .. 2363240 - -15.5  -4.97405   AGCCACAAAAACAAA         GGAGAGTAGCC GCCA GGCTACCCTCC          GCTTACTGCCTCTGG 100 46
ISU55_RS10750 2360697 .. 2360710 -  -2.5  -3.73072   AACCTCGGCAGGAAA               TAAAT ATGT ATTTA                CAGGGCGCGCATAGT  50 65
        tsaB NONE
ISU55_RS10740 2359027 .. 2359044 - -12.7  -4.64844   TGTAGATATAGAAAA             GGCGCTG GACT CAGCGCC              TCTGACTGCTGACAA 100 219
        fadD 2356852 .. 2356886 - -18.1  -4.31433   TAGTTCGATAACAAA    CA-CAACAACGCCGGT GATA ACCGGCGTTGTTGATG     ATTTAGTGACTCCGT 100 45
         rnd 2355403 .. 2355428 - -14.8  -3.61517   ATTTCTTCTCAATAA         CGCCCCTGTA TTTATT TACAGGGGCG          TTATTCTCAATTGAC 100 222
ISU55_RS10705 2352519 .. 2352567 -    -4  -2.65448   CCAAAGCCAATGAAT TTCA-CATCACGACATTTACATC CTCT GCGGTCAATGTAGTGATGCTGAA TTTAAACGTGGTTGA  45 57
ISU55_RS10700 2351376 .. 2351396 -  -6.1  -2.78672   GGCAAACACAGACTA            TTGACCGAT ACT ATCGGCCAT            CATACCAATGCTAAT  55 2
ISU55_RS10695 NONE
ISU55_RS10690 2349686 .. 2349699 -  -4.5  -5.20328   GGGGAAAAAAATAAA               GGTAG ATGT CCACC                TTCGCGAATTTGGCA  80 423
ISU55_RS10680 NONE
ISU55_RS10675 2346552 .. 2346574 -  -2.8  -3.67141   ATAACGTTATTCAAA          TG-AACCCA AGCAAA TGGGTTTCA           GAAGACCTGCTCATG  52 412
ISU55_RS10660 NONE
ISU55_RS10655 NONE
ISU55_RS10650 NONE
ISU55_RS10645 2343748 .. 2343773 -  -2.5  -2.72799   CTCCTACATATAGGA         TGATCACCACC GTCT GGTGCAAATCA          TTGGGTGGTGAGACG  41 23
ISU55_RS10640 2342758 .. 2342775 -  -9.1   -4.8622   TCTCTGAAGTAAAAA             GGCCCAC CGAA GTGAGCC              TTGAAATTAGTTGGT 100 409
ISU55_RS10630 2342126 .. 2342145 - -11.4  -4.43272   AGCTAAAACGGAAAA            GGCCACGC ATAA GCGTAGCC             CTGAAAAAGTACCGG 100 406
ISU55_RS10620 2341818 .. 2341828 -  -3.2  -3.14564   GTATTTTCTTACGAA                 GAGC TGG ACTC                 ATTAGCCTTCTCCCG  46 8
ISU55_RS10615 NONE
ISU55_RS10610 2340429 .. 2340450 -  -8.7  -5.45652   ACTGCCAATAAAAAA           GGCCCAGTC GTTA AACTGAGCC            TTCATGTTCTTTGTT 100 400
ISU55_RS10605 2339136 .. 2339160 - -11.5  -3.85698   CCGCTGGTTGATAAA          GTCTCAGCC GCTAATT GGCTGAGAC          TTCGATATGTGAAAA  95 431
ISU55_RS10600 NONE
ISU55_RS10595 NONE
ISU55_RS10590 NONE
ISU55_RS10585 NONE
ISU55_RS10580 NONE
ISU55_RS10575 NONE
ISU55_RS10570 NONE
ISU55_RS10565 2332593 .. 2332610 -  -6.2  -5.14563   TGGCCCATTAAAAAA             CCCCGC ACGATG GCGAGG              CTCAGATTTTGGATA  87 85
ISU55_RS10560 NONE
ISU55_RS10555 2330528 .. 2330541 -  -9.5  -4.66537   TCCTCCAATAGAAAA               GGGGC CACA GCCCC                CATAGTCATCACCAT 100 40
ISU55_RS10550 NONE
ISU55_RS10545 NONE
ISU55_RS10540 NONE
ISU55_RS10535 NONE
ISU55_RS10530 2328398 .. 2328411 -  -9.5  -5.71712   TTGGATATAAAAAAA               CCGGC ATAG GCCGG                TGGTGTTGGATTGAT 100 47
ISU55_RS10525 NONE
ISU55_RS10520 NONE
ISU55_RS10515 NONE
ISU55_RS10510 NONE
ISU55_RS10505 2322812 .. 2322829 - -10.5  -5.64274   TCACCCATAAAAAAA             GGCCGCC ATAA GGCAGCC              TTTAGAAAGGGCGTG 100 163
ISU55_RS10500 NONE
ISU55_RS10495 2321107 .. 2321124 -  -3.4   -4.9218   TACTTATGACAAAAA             CCGAAA TTTCGT CTTCGG              TGTAACGGCATAACC  71 229
ISU55_RS10490 2320399 .. 2320412 -  -9.5  -4.78149   GCTAGAATGCAAAAA               CCCGC CGGA GCGGG                TTTAGTTTTTATTCG 100 48
ISU55_RS10480 NONE
ISU55_RS10475 2318508 .. 2318523 -  -6.1  -4.85195   AAAATAACGCAAAAA              CCCAC AGTTAA GTGGG               TTGGGTTTTGTGTGA  80 55
ISU55_RS10470 NONE
ISU55_RS10465 2317508 .. 2317523 -  -8.2  -5.45652   ATCTCCAATAAAAAA              GGCCGC CTAA GCGACC               TCGATTTGTTTTACA 100 47
ISU55_RS10460 NONE
ISU55_RS10455 2316316 .. 2316332 - -12.3  -5.64274   TCACCCATAAAAAAA              GCCCACA AAG TGTGGGC              ATTGGCGTGTTTATT 100 356
ISU55_RS10445 NONE
ISU55_RS10440 2312083 .. 2312093 -  -2.6  -2.95884   GTACCAAGCCATATA                 TTAA TCC TTAA                 TTTTAAAAATAAATG  43 28
ISU55_RS10435 NONE
ISU55_RS10430 NONE
ISU55_RS10405 2304027 .. 2304045 - -11.7  -3.21416   TATCTTTATTATCAA             TGGCGCC TCTCT GGCGCCA             TTTTTATATCAGATT  84 398
        fadR 2300511 .. 2300527 - -10.1  -5.04385   GACATCGGTAAAAAA              GGGGCAT TAA ACGCCCC              TCAGACTGCTGACAA 100 196
ISU55_RS10380 2296757 .. 2296770 -  -3.1  -4.68593   CGGATTATTCAAAAA               GT-GGG CCG CCCTAC               CTGCCTGATGATCGG  66 432
ISU55_RS10365 2293681 .. 2293693 -  -4.8  -3.72742   GTATCATCAACATAA                GCAC TAGCG GTGC                AAACGTTAGCGGTAT  57 54
ISU55_RS10345 2287864 .. 2287880 - -13.7   -5.0916   CGGTCAATATAAAAA              TGGGGCC TTT GGCCCCA              TGGTCTTGCTCATAG 100 55
        msrB NONE
ISU55_RS10325 2284434 .. 2284455 -   -13  -4.56597   CTTTCTGCGCAAAAA           TGGGCGCC TGCCTC GGCGCCCA            TTTTTTGTATTCAGA 100 119
ISU55_RS10305 2279992 .. 2280025 -  -5.3  -4.18094   CAAAGCAGGCTAAAA     CGCAGCTTATTCCCC GTAA AGAACATAAGCTGCA      TAACATGAGTGAAGA  65 56
        selD NONE
ISU55_RS10295 NONE
ISU55_RS10290 2276221 .. 2276246 -  -6.9  -2.78679   TTCCTGGAGGCAAAG         TTGAGGCTGGAG AAA CTC-AGCCTCAG         GCGCTGATCCGTGAG  53 290
ISU55_RS10275 2273446 .. 2273463 -  -8.5  -3.27704   ATCTGGGAAAGGTAA             GAACCTT CGAC AAGGTTC              GCGCCGAGCGTAGAA  69 100
ISU55_RS10255 2271244 .. 2271255 -  -5.8  -3.24747   CGGCCATACCACCAA                GCGT ATGA ACGC                 GGAGTGAAGATTATT  55 228
        rssB 2267573 .. 2267584 -    -3  -2.52464   GTCGTCGCGAACGTA                TATC TATC GATA                 TTTCTCGCGATACGA  42 169
ISU55_RS10235 2265673 .. 2265696 - -15.4  -3.69323   CTATTACTATCGAAA          CACCCTCCTA TTAA TAGGAGGGTG           TTTTTTTGTCTTTCA 100 404
ISU55_RS10225 2263602 .. 2263628 -  -5.2   -3.5882   GACAGTAGGGTCAAA         CAGCTATATCAT AAG ACAATATTGCTG         AATGGGCTGGACAGG  59 290
ISU55_RS10210 2261052 .. 2261076 -  -9.9  -4.43877   TAATTCGGAAATAAA          TATCCTCCGGC ATA GCCGGAGGTTT          TTCATATGCGCCTAT 100 103
ISU55_RS10190 2256273 .. 2256294 -  -4.4  -3.34895   CTTATGGTTAACCAA           CAGCGC GGTACAAGTT GCGCTG            GTTTTGATTTGGCTG  52 406
        pntA NONE
        pntB 2250459 .. 2250486 - -15.6  -3.62046   GCACTTTGTCAATAA        CCTCAGGGCCAC CGAA GTGGCCCTGAGC         AATACAATGGATGTT 100 53
        phoA 2246072 .. 2246094 -  -9.9  -4.96646   GGACATAAGCAAAAA          TCCCGGC-CA TTAC TGCGCCGGGA           CGTTCCAGTGAGATA 100 50
ISU55_RS10145 NONE
        yjjG 2242323 .. 2242345 - -10.6  -3.63627   TTGTCACACGTTAAA           CCCTGTCG TTACTGC CGACAGGG           TTTAACGGGCTTATT  82 52
ISU55_RS10120 2238815 .. 2238841 -  -7.9  -4.84017   AACGTGCCACAAAAA         TGCGCAACTCC CCGAC GGAGAAGCGCA         TTTTTTAAACAGCAG  91 122
ISU55_RS10100 2229976 .. 2230007 - -13.8  -3.17075   GCTCTCTCAATTCAA      TACGCAGGCGG-TGA TCA TCATCCGCCTGCGTT      GTTTTTCAATCTATT 100 45
ISU55_RS10075 2225494 .. 2225510 -  -5.1  -3.29144   TTAGCTGTTTTATAA              CCACCGA ACA TCGATAG              CAACTCATGTCACCA  55 30
ISU55_RS10070 2224094 .. 2224110 -  -6.6  -2.78712   TCGTGAAGCTAACTA              CGATAC GGCCT GTATCG              GTATCCTCTCATCAA  57 350
        clcB 2222318 .. 2222329 -  -2.2  -2.95204   TTATGCTGAAACAAT                CGCA ATGC TACG                 GGATCGGTTAGCCGC  41 251
ISU55_RS10045 2217850 .. 2217868 -  -6.6  -2.55015   ACGCCACCTAACGTA             CCGGCTAC GCT GGAACCGG             CATAGTAACAAAACA  55 57
ISU55_RS10040 2216523 .. 2216543 -  -6.8  -3.26649   ACATTGTTATATTAA            CGCCGG GGTGGATTA CCGGCG            TTTTTACAGTGGCTA  61 62
        manA 2213504 .. 2213517 -  -3.1  -5.07107   GAAATCCCCAAAAAA               GAAGA TATA TCTCC                CAAATAATATAGGCC  71 152
ISU55_RS10025 2211814 .. 2211831 - -12.7  -4.27861   AATAGAGATTTAAAA             CGGAGCC AATG GGCTCCG              TTTTTATCAAACAAA 100 54
ISU55_RS09985 2201579 .. 2201597 -  -3.2  -4.54047   TTACTCGATATAAAA             CATTCA GTTATCG TGAATG             TCGTTAAAGTAGACT  63 52
        araA 2199936 .. 2199980 -  -7.8  -2.59748   CATGGTTATAACGCA TTGTCATCACCCTCAGGAGCC AACA GGCCTCTGAGGGTGTCG-CTA TCATAGCGAATTTTA  60 83
ISU55_RS09950 2193238 .. 2193263 -  -5.4  -5.55855   CCTAAAAAAATAAAA         GCCGCCTATT ATCCAA AATTGACGGC          CCGACGACAACAGAT  87 100
        rsxA 2192635 .. 2192653 -    -6  -3.46965   AAGACATCATTAGAA             CTTCACCA AAC CGGTAAAG             CCCATAAAGGCCAGA  59 1
        rsxB NONE
        rsxC 2189611 .. 2189625 -  -7.2  -2.70932   GTTTTCTGTTAAGGA               TGTTGA TGG TCAACA               GGGGCAGAAGAGCGT  55 434
        rsxD NONE
        rsxG NONE
ISU55_RS09915 NONE
         nth 2185321 .. 2185362 -  -7.3  -2.53995   ATTTAGCCGAATGGA TTCAAATTTGGGGTCAGCA TAAT CGTCGCCCCCAAATTTGAG  CCAGGTAGAATTTAA  58 141
ISU55_RS09895 2180313 .. 2180338 - -16.1  -5.30189   CATAACATTAAAAAA         GCCGTCGGGGG AATT CCTCCGACGGC          TATCATGTTAAAACA 100 49
ISU55_RS09890 NONE
ISU55_RS09885 2177587 .. 2177617 - -13.5  -4.18506   TGAGCGGTAAAAGAA       TAACGCCCTATAA AATCA CTATAGGGCGTTA       CGGTGTCACTAATTT 100 56
ISU55_RS09875 2176026 .. 2176038 -  -6.9  -3.73402   ATACTTTCCATGAAA                GGGGC ATC ACCCC                AGATGCTGTACCTGC  64 271
        osmB 2174663 .. 2174690 -  -9.3  -4.60797   CGCGCAGATATAAAA        TACGGCGT-TGA TATTG TCAAACGCCGTA        TTTTATTTAGAACTT 100 200
ISU55_RS09850 2172741 .. 2172760 -   -10  -2.63073   CTTTGCTAATAAGAT            CGGGTGAA CGGG TCCACCCG             GTTGTTAGCTGTTGT  71 60
        ribA 2169102 .. 2169128 -    -8  -3.56092   TTATCAGCCTCTAAA         GGGTAGGTATAA TTA TTGAACCTACCC         TTATTCTTATTTCGC  68 57
ISU55_RS09800 2160025 .. 2160054 - -10.8  -3.10611   GTGATGGCAATAAAT       GCAGGGGGTA ATCTGAACGG TACCCCCTGC        TATTTGCTACCAACC  79 82
ISU55_RS09790 NONE
        cobO 2156993 .. 2157015 -    -9  -3.55801   ATTAATTTGCCGAAA           GGCCTGCCAC GGG GTGGCTGGAC           TGAACTGGATCTTAA  70 416
        trpL 2153942 .. 2153956 - -11.4  -5.64274   CTATCCATAAAAAAA               CCCGCT ATT AGCGGG               CTGAAGCAATCTGCA 100 53
ISU55_RS09760 NONE
ISU55_RS09755 NONE
        trpD NONE
       trpCF 2149182 .. 2149204 -  -3.4  -2.76399   GTTAACCAAAGTAAG           TTCATATCCC CTT GGTATTTGAA           GCCGCAGTGGTGTTA  43 114
        trpB NONE
        trpA 2147021 .. 2147049 - -10.4  -3.65832   AAATGGCTGAAAATA        GCGCCTGTTT CATGTAAAC AAACAGGCGC        TGAAGGGCGGTAATG  82 116
ISU55_RS09730 2146452 .. 2146473 -  -7.2  -3.14564   TTAGGCGGGCAGTAA           GGAGGTGC GGTTAT GCGCCTCC            TCCTGTTTTTTACTT  62 35
ISU55_RS09715 2144197 .. 2144207 -  -3.2  -4.09739   TTAATCGCCTGAAAA                 GCCA TGA TGAC                 GATTTGGTCTTGGTC  56 263
ISU55_RS09700 2141757 .. 2141772 -  -2.6  -3.04398   GTCTGCTTTTAAAAG              TTAATC CACT GACTAA               GGGCGGCCCACTGAG  43 70
        yciA NONE
ISU55_RS09690 2139579 .. 2139597 -    -3  -2.76696   CTGGTTGCGAACAAT             GCACCGGT AAA ATCGGCAC             CAGTTGCCTCAACAC  41 360
ISU55_RS09680 2138549 .. 2138561 -  -3.3  -3.71913   TTTAGATTCAAAACA                CCCGT TTA AAGGG                TTTAATAATTACCGA  51 5
ISU55_RS09675 2138001 .. 2138040 -   -11  -6.15536   AATTAACAAAAAAAA  CTTATAATAATACGCCTA GCTT TAGGCGTATTATTATATC   TAGTGTCTACAACCG 100 58
ISU55_RS09655 2135983 .. 2135997 -  -2.9  -3.25378   ATTGATGTATAAAAT               CTTTT CATCT AAAAG               GACTTGCAACTCTCG  46 15
         cls NONE
ISU55_RS09645 2133882 .. 2133912 -  -8.2  -3.21466   AGGATAATTAAGATA       CATTGCCCCGGGGT TGA ACTATGGGGCAATG       ATTAACTCTTTATTT  67 52
        adhE 2122236 .. 2122263 - -15.6  -5.07652   GTCTGTAAAAGAAAA        CCCCCGATCAGC GGCT GCTCATCGGGGG         TTATATCATTTTTTG 100 83
ISU55_RS09600 NONE
ISU55_RS09595 2119714 .. 2119732 -   -16  -4.37092   ATTGTGCCCAGAAAA             CCCCCAGC TAG GCTGGGGG             TTCAGTAAAGCTTTC 100 273
         asr 2113894 .. 2113911 - -12.7  -5.24531   ACTCCTGATAAAAAA             CACCCGG AGAA CCGGGTG              TTGAGTGAATCATTT 100 93
ISU55_RS09565 2112790 .. 2112801 -    -3  -2.54566   AAGATCGCATAATAT                TTAG CGGG CTAA                 GGTAAAATTACTGAG  42 33
        azoR 2106734 .. 2106751 - -14.1  -5.35222   AAAAGGCATAAAAAA             GCGCGCC GGTT GGCGCGC              AATCATCACATGGCT 100 124
ISU55_RS09535 2103896 .. 2103906 -  -8.2  -3.17798   GCAGAAATTAGTCAA                 CCGC GCG GCGG                 AGGGCGAATATGTGC  62 291
ISU55_RS09515 2099379 .. 2099408 -  -7.9   -3.4252   TCCTACTCATCATAA       CGGATAGGGAG AATGTACA CTCGCTATCCG        CTATTGGGTGTTAAT  68 44
        hslJ 2098629 .. 2098641 -  -2.6   -3.2056   AGCGAGACCTACGAA                CCCG AGCAG CAGG                CTACCAACGCTATCG  44 289
ISU55_RS09500 2097085 .. 2097098 -  -2.3  -2.74461   CACTGACTTGTAAAG               CCGCT GTGA AGCCG                GTGTCAATTTAATGA  41 489
        nifJ 2093098 .. 2093123 - -13.4  -5.18995   AAGATAATAGAAAAA         GCCAGTTAGC GGTTTA GCTAACTGGC          TCAGTAAATCGCACA 100 60
        ttcA 2091715 .. 2091727 -  -6.3  -3.12856   AATCAATATAAAGGA                TAGAG TTA CTCTA                TAGTCAATGGGGTAG  57 240
ISU55_RS09480 2090644 .. 2090661 - -12.7  -2.85545   TTGCCAATAACATCA             GTGGGCC ATTT GGCCCAC              TATTTTTACTGGCTA  89 31
ISU55_RS09475 2089201 .. 2089235 -  -4.2  -4.67353   TTAGTCACCGAAAAA     TTGAGCCACATCAAGA CTT TGTTGTGGTGGCTCAG     GCATGATTATTTTGC  68 306
        mpaA 2084672 .. 2084683 -  -2.2  -2.73364   CGTTGATGCTAATGA                GGCT TGGC AACC                 TGAAGGGCTGGCAGC  39 494
         tpx 2083370 .. 2083394 -  -7.8  -5.55769   GGGCACAATAAAAAA         CGGCTGTACCC GAGT GGGG-CAGCCG          TTTTGAGTCACGATA 100 101
        tnpA 2082500 .. 2082515 -  -4.6  -4.37092   AGGGCCGTTATAAAA              CGACGC TTCA GCGTGG               AGTAATGGCCCCCCG  66 374
ISU55_RS09420 NONE
ISU55_RS09415 2077325 .. 2077343 -  -8.8  -3.85817   AGGCTCGGGCAGAAA             TCAGCCGC TAT GCTGCTGA             ATCAGCGTTGATGAT  75 456
        pspF 2072231 .. 2072249 - -10.2   -4.8048   GGCGCATATGAAAAA             CCTCCGGC TAT GTCGGAGG             ATATTTATTTTACCC 100 91
        sapA NONE
        sapB NONE
        sapC 2067541 .. 2067551 -  -2.6   -2.6155   GTTGCGAATATCAAG                 TAAT GGC ATTA                 TTCCACCCCCGCATT  41 23
        sapD NONE
        sapF 2065682 .. 2065701 - -12.2  -3.96534   GTTAAAAGAAGATAA            CCGCTATC AAAA GATAGCGG             GGAGGTTAACCACCG 100 66
ISU55_RS09345 2063855 .. 2063866 -  -2.2  -4.30441   GCAGAATAGGCAAAA                TGCG TGCC CACA                 AAAATAGTTGTGTAA  58 231
        dtpA 2061896 .. 2061913 - -12.7  -4.33105   TAACTAGCACTAAAA             GCGCTCC CGCA GGAGCGC              GTTTAGTCAGCTTAT 100 37
ISU55_RS09335 2060934 .. 2060946 -  -4.8  -4.84492   TTAATGACAATAAAA                GCCT GTTAG AGGC                TCCAATGCTGATGGA  74 159
ISU55_RS09330 2060430 .. 2060472 -  -3.4  -3.03441   TATGAGGGGGCAATA CAAGTC-CTACAGCGGTGA TGATTT CCCCCGCTGTAGTGTATTG ATAGTTGTATTGATA  44 124
        gstA 2059670 .. 2059706 -  -5.1  -2.78712   GCTGTAATCTAACCA    TTTTCAATTGCCCCC TAGTGAT GGGGGCAATTGATTG    ATTCTCATTATTTAT  50 40
ISU55_RS09295 2053857 .. 2053887 - -14.1  -5.34555   CCACAGTACAAAAAA       CAAACCGGGGTTC GCAAT GAACCCCGGTTTT       TACTGTTCTGATTTA 100 77
        eptA 2051041 .. 2051060 -  -5.7  -5.80364   AGGTCAAGAAAAAAA            TGCCAAC CAAGGC GCTGGCA             TCAAGGCTATGGTCT 100 185
ISU55_RS09280 2050332 .. 2050350 -  -3.9  -3.12895   TCCTGTATTAATAGA            CCAGTCAA CTAG TTG-CTGG             GTAAATCCTGAAAAA  48 73
        gloA 2048900 .. 2048917 -  -8.4  -4.48987   TTGTGATAAGTAAAA             GGCACC GTCCGA GGTGCC              CTTAAGTTAATCAGT  87 36
         rnt 2047944 .. 2047961 -  -8.4  -4.15703   TGTGATAAATAAGAA             GGTGGC GTAATG GCCACC              TCAGACTGCTGACAA  79 233
ISU55_RS09250 2046158 .. 2046169 -    -3  -3.16668   GAATATTTTTACTAA                CAAA TATT TTTG                 ATAACAAAGTTTTTA  46 75
        sodB 2045188 .. 2045210 - -16.4  -3.68222   GGTGAATGGTAATAA           TAAGGGCGGT TAA ACCGCCCTTA           TTTATGTTATCGATG 100 78
        purR 2043644 .. 2043664 -  -9.8  -3.85092   ACCATCGATAGCAAA            TAACCGCA GGGAA TGCGGTTA            TCCGAATCGGGCCGG  84 72
ISU55_RS09225 2041154 .. 2041167 -  -2.3  -2.58999   CCGTCATACACCAAG               CTGCA TATC TGCTG                GCTGCTTTCCAACCA  40 56
         cfa 2039531 .. 2039554 -  -9.6  -4.73105   ACCTACAAAAAATAA          GACAGGGG TTTTTATC CCCCTGTC           TCCTATCTGAGGTTA 100 38
ISU55_RS09210 NONE
ISU55_RS09205 2037043 .. 2037053 -  -8.2  -3.39449   GGGGACGAATACTAA                 CGGG CTG CCCG                 TCTGCTGGCAAGAGG  69 210
ISU55_RS09200 NONE
ISU55_RS09195 2036729 .. 2036741 -  -7.7  -3.32516   AGAAATCAACCAATA                GTCAG GAA CTGAC                AAAGGAAAAATAGAG  66 67
        pykF 2034740 .. 2034769 - -10.8    -5.055   GCAAGCTTTAAAAAA       GAAAACGCCGCT ATAGAG AGCGGCGTTTTA        ATTATTGAACAATAA 100 51
ISU55_RS09185 2034199 .. 2034217 - -14.6  -5.60993   CTGGGCACAAAAAAA             TGGCGCAC AAT GTGCGCCA             TTTTTCATTCAGGAA 100 47
        tnpA 2033594 .. 2033612 - -13.2  -4.01078   AAAAGTGACCATAAA             CTCTCCTG AAT CAGGAGAG             CAGATTACCCCCTGG 100 30
ISU55_RS09175 NONE
ISU55_RS09170 2031528 .. 2031552 -  -9.9  -4.44046   CGTAGGGCAAATAAA          TATCCTCCGGC ATA GCCGGAGGTTT          TTCATATGCGCCTAT 100 262
        ydiK 2017918 .. 2017928 -  -2.6   -5.4505   CCTCTGAATAAAAAA                 TTAT TAA ATAA                 GAAGTAGAATGAGAT  80 199
        rprA NONE
ISU55_RS09100 NONE
ISU55_RS09095 2012660 .. 2012708 -  -7.8  -5.00616   TTTTTTCGGAAAAAA TAGGGATAGA-AAAAGTTAAC CCGACAAC GTTAACTTTTCCCTATCCCGA AGGTATTCATTTAAT  95 75
ISU55_RS09075 2009290 .. 2009304 -  -4.3  -3.20029   CCAGCTAAATATATA               CCTAA AGTCG TTAGG               TGTGCAGTAAGGCAG  49 67
ISU55_RS08975 1990045 .. 1990059 -  -3.6  -3.09516   TTGTGTACTACCCAA               TTTTGC GGC ACAAAA               ACTTGCCTTTTATCA  48 3
ISU55_RS08965 1987912 .. 1987954 -  -4.9  -4.21098   AGAGTAATGCTAAAA CGCTAACCGATG-TAGCCTA TGGA TGGTGTAGCATCGGCTAGCG TTTACTTTAAATTTT  63 96
        yfeA NONE
        yfeB 1985166 .. 1985180 -  -4.2  -3.14848   CGGTTGCAGTAAAAG               TTCCAG CAT CAGGAA               TTTTGCTCCTTTGAC  49 19
        yfeC NONE
        yfeD 1983348 .. 1983379 -  -2.3  -3.05844   TCGTTGATGGTAATA      GGCGG-GCTATATA ATAGA CATACAGCACCGCA      TATAAATAGAAACGT  42 46
ISU55_RS08935 NONE
ISU55_RS08930 1982112 .. 1982136 -  -4.1  -3.83998   TTATTTGACATCAAA          GCCAACACCAC TGC GATGCGCTGGC          TTTTTTCATTTATTG  57 109
        hxpB 1980366 .. 1980379 -  -3.7  -4.72272   CTTTTTTACTAAAAA               GCCGC ATTT GCCGC                TATTTACCTTTGTCA  67 107
        kduI 1977400 .. 1977416 -    -5  -3.60627   TTATTGGAGGTGAAA              GCCGCC GTAAA GGTGGC              TTTAATAGGTGATAC  57 41
        kduD 1976472 .. 1976491 - -12.2  -5.74288   ATAAATAATAAAAAA            GGCACAAC CAAA GTTGTGCC             TGATGCGTTTTTGAG 100 113
ISU55_RS08895 NONE
ISU55_RS08890 NONE
ISU55_RS08885 NONE
ISU55_RS08880 NONE
ISU55_RS08875 1970219 .. 1970256 - -14.4  -3.74693   TTTTATTTGATTAAA   CAAAATAACCCCACCA AATAAA TGGCAGGGTTATTTTG    TGACTTAAGTTAAAT 100 52
ISU55_RS08870 1969178 .. 1969207 - -13.1  -5.53288   GCTAAGCTAAAAAAA       GGGAAAAG-TGACT GGG AGTCAACTTTTCCC       CAAAATAATGCAGAG 100 93
ISU55_RS08865 1968208 .. 1968221 -  -3.9  -3.73775   TTGATTTGTATTAAA               TCAAA TCAA TTTGA                ATGTTATTCATACGG  53 51
ISU55_RS08860 1966570 .. 1966597 -  -5.4  -2.87916   TCAAAAATAAAGCGA        CTCACTCGTGGG GTAT CCCACGGTTGGG         GGCTAAAAAGTGACT  50 80
ISU55_RS08840 1960919 .. 1960932 -  -2.3  -3.29935   CAATCATCACAAAAT               GCGGT ACAA ATCGC                TTTTCGCTCACGTAT  44 428
        yebS NONE
ISU55_RS08785 1945304 .. 1945318 -  -2.2  -4.26003   ACAAGACGCAATAAA               TAATAA ATT TCATTA               TCCTAATGTTGATTT  58 350
ISU55_RS08780 NONE
ISU55_RS08775 1944085 .. 1944099 -  -2.8  -2.57423   ATACTTACCAACTCA               CCGT GACCTGA ACGG               TATCAGTATAGGTCC  41 0
ISU55_RS08770 NONE
ISU55_RS08765 NONE
ISU55_RS08760 1940018 .. 1940030 -  -3.3  -4.43397   CCTTAAAATAAATAA                GTTCC TGG GGACC                TACTCTGTTGTTGCC  63 90
ISU55_RS08755 1938797 .. 1938810 -  -2.3  -4.13963   ATTCTCTAAAAAATA               GCGCT TGGA AGCGA                ACGAGTATTCGGAAA  55 115
ISU55_RS08750 1938401 .. 1938434 -  -2.5  -4.46073   TTCCAAGAGAAGAAA     CCGTCA-CTCATAA GCATGAA CTATGGGTTGACGG     ATCTTCTTATCGCCA  61 44
ISU55_RS08740 NONE
ISU55_RS08735 NONE
ISU55_RS08715 1931778 .. 1931790 -  -3.5  -3.23447   GTAACTGGTATAAGA                TTTTT ATT AAAAA                TATATTTTTGTGACG  48 350
ISU55_RS08710 1930366 .. 1930384 -  -7.4  -3.58905   ATCTCGTACAGACAA             CGCGTCCT GTG AAAACGCG             TCACTCGTTGAAAAC  68 125
ISU55_RS08635 NONE
ISU55_RS08630 NONE
ISU55_RS08625 1905283 .. 1905293 -  -6.8  -4.70659   GTTGATATCGAAAAA                 CTGC TGA GCAG                 TGAAGAGATGTCGTT  79 357
ISU55_RS08565 1886609 .. 1886627 -   -11   -5.9003   AAAGGAACAAAAAAA             GCGCCCAT AGG ATGAGCGC             GTAAATTTTGCAAAG 100 211
ISU55_RS08560 NONE
ISU55_RS08555 1884434 .. 1884449 -    -4  -2.64616   TTTGCAGGGAGATGA              GTTAAC AATT GTCAAC               GACGGATGAAAAGTG  45 85
ISU55_RS08550 1883213 .. 1883235 -  -6.4  -2.87683   ACAGTTTGTTATATA           TTAGCATGAA AGC TTAATGCTAA           AGCATATCAGTTCGA  55 227
ISU55_RS08545 1882262 .. 1882273 -  -5.8  -2.78463   ACCTCGGTGAGTAGA                CCCA AAGT TGGG                 AGCAGTCTCAGTGGT  53 373
ISU55_RS08535 1881532 .. 1881546 -  -2.8  -3.13403   TCTGGTTTATCAATA               CACATC AAA GATCTG               CTCCTAAATATCAAT  44 107
ISU55_RS08530 1880593 .. 1880617 -  -5.8  -3.16564   GCCTTAGTCTATTAA         CTCCCCCA-TA GGGT TAGTGAGGGAG          TTAGACGCTATGTGG  55 45
        ydfZ 1879971 .. 1880006 -  -5.5  -5.60993   GCTGTCATAAAAAAA   GCCGGG--TGGCCCA ATAAAAGG TAGGCCAGACCCGGC    AAATAAATACCGGCA  91 150
ISU55_RS08505 1876124 .. 1876134 -  -5.4  -2.62515   AAGTGGTTGAGATTA                 TTCC TGC GGAA                 AGTATCACCCTTAAA  49 463
ISU55_RS08500 1873973 .. 1873990 -  -2.7  -2.80344   TCCTTATTTAATAAT             TGGATAA CCAC CTACCCA              CTATAGCGAGGTTTT  42 107
ISU55_RS08495 1873620 .. 1873637 - -11.3  -3.18292   AGGCAGCAGTAAAAC             GCCCTCA ATAT TGAGGGC              TGAATGTATTGAGGA  84 80
ISU55_RS08490 1872246 .. 1872273 -  -8.4  -3.92869   TGACGTATCTATAAA        CTTCACGAGGGC TTAT GCTTTCGTGAAG         TTTATACTATTTATG  77 125
        rluE NONE
ISU55_RS08475 1869766 .. 1869782 -  -2.2  -4.19336   AATTACCTGAATAAA              TCTGGC TGAGG GTCAGA              GCGGCCAGTTAAAGG  55 21
        mnmA NONE
        hflD NONE
        purB 1866304 .. 1866349 -   -13  -3.34192   AAGGGGGGGAAGGAA TAATACAGATGGCGTTAGCTT TTACC AAACTAA-GCCACCTGTATTA GATAAAGAATATTAC 100 37
ISU55_RS08455 1865359 .. 1865393 -    -5    -4.386   CAATCCTTGATAAAA     CGTTAACCGGATAACA GGA TATTATCCGGTAAGTG     AAAATTTGACGCTCA  66 182
        phoP NONE
        phoQ 1863162 .. 1863177 -  -3.2  -2.62515   AATTGCCTGAGATTA              TAACGG ATAC CCGCCA               TCAGTATCAGGGGCT  42 56
ISU55_RS08440 1861790 .. 1861806 - -10.8   -4.1897   AACGATAGAGAGAAA              CGCCCC GAAAA GGGGCG              TTTGAGGTTATTGAC  93 222
         mfd 1851255 .. 1851274 -  -2.8  -4.87665   CCCCATTGATAAAAA            TGGTCAAC TGGT GCTGAACA             ACCGAGCGTAATACC  67 275
         maf 1825387 .. 1825409 - -11.2  -2.56836   GATGATCATAAAAGG           CGGGGGGCAC AGC ATGCGCCCCG           TTTTTATTCGACTGT  76 80
         rne NONE
ISU55_RS08240 1818517 .. 1818538 -  -7.3    -4.371   TTGAGTATACTAAAA           CAGCTCACT CGGT AATGAGCCG            CATTGATCCTCGTTA  75 337
ISU55_RS08220 1815946 .. 1815962 -  -5.1  -3.13867   CTATTTATCAAGATA              TTGCTGG CAG CCATCAA              GCTATCTGCTTCACT  53 22
        solA 1812779 .. 1812792 -  -2.4  -3.92542   TTTAGTCGCAAACAA               GGAT AAGGTA ATCC                CCTAAAGGCTTGAAC  53 231
ISU55_RS08200 1811992 .. 1812008 -  -5.2  -4.07495   ATGTAACAAAAAAAT              TCAACA AACCA TGTTGA              TTGAGTGTGGTTGAT  63 134
ISU55_RS08195 1811565 .. 1811604 - -11.4  -4.37092   ACGGTGGTTAGAAAA  CCCTCAGGGCCACTGG TTAATTGG CCTACGGCCCTGAGGA   ACCGAAAATGGGGTA 100 81
ISU55_RS08170 1806273 .. 1806285 -  -6.3   -5.0095   AAAAAGAGAATAAAA                GAGAA ATT TTCTC                TCCTCGGGAAAATGA  81 208
         fae NONE
ISU55_RS08140 1800740 .. 1800755 -  -5.4  -3.33744   TCTGCGTTTAAAAAG              CCGTTC CAGT GAACAG               TATTTTCTATTGTTT  53 208
ISU55_RS08105 1789863 .. 1789874 -  -2.2  -3.12702   TACCACTTAATAAAC                GCTA CAAT CAGC                 CCGCTACTCACAGCA  43 249
ISU55_RS08065 NONE
ISU55_RS08060 1778988 .. 1778999 -    -3  -2.75481   TTGCAACTTTAATTA                CTTT GGAT AAAG                 CAGTTGAGTTAATTG  43 11
        ugpC 1777295 .. 1777329 -  -4.2  -3.53174   AGATGGTTATAAAGA     CTTGTTGTTACATGCG ATG CGCAACTACCAACCAG     CGGCAGAGAGTGTAA  54 502
ISU55_RS07970 NONE
ISU55_RS07965 1753364 .. 1753374 -  -6.8  -3.01791   ACGGCGGGTTGAACA                 TGGG TGC CCCA                 TATTTTCGTAGGCCG  58 43
        rhtA NONE
ISU55_RS07915 NONE
         tam 1741714 .. 1741725 -    -3  -4.16943   GTTTATACGCTAAAA                TAAC GTTT GTTA                 TAAATAATATAGTTA  58 113
         dps 1741002 .. 1741018 - -10.8  -2.71364   GGAGGGCGGCAAGCA              GGGCCG GTTAA CGGCCC              TGTTCAGCGTAATAG  76 60
ISU55_RS07900 1739329 .. 1739339 -  -4.6  -3.13899   AAGGCTGCACTAACA                 CGGG ACA CCCA                 AAAGGTGCGATAGCG  51 292
        glnH NONE
        glnP NONE
        glnQ 1736776 .. 1736804 -  -8.8  -5.26918   ATAGCCTATAAAAAA        CTGGCGGGTATC AGTAA GATGTCCGCCAG        TGTGATTTCTAGCCA 100 104
ISU55_RS07875 NONE
ISU55_RS07870 1733204 .. 1733215 -    -3  -3.58329   TAAAGACGCCGTAAA                TACA TCCA TGTA                 GGCTCGAACCGCGCC  51 295
ISU55_RS07865 1732653 .. 1732677 -  -5.8  -2.72217   AAGCCAAATAAGCCA         GTGACCAC-GA TAAG TCAGTGATCAC          GATCAGCCAGTTACC  52 441
ISU55_RS07855 1730709 .. 1730731 -  -9.1  -4.93296   TCACCACCAGAAAAA           GCCCATCAG ATGAA CGGATGGGC           TGAGGTTATTGACAA 100 359
ISU55_RS07780 1710861 .. 1710871 -  -2.4  -4.56775   ATTTTTGGTTAAAAA                 TGGC TCC GCCT                 ATGGCTGCGTTTTAT  60 45
ISU55_RS07755 NONE
ISU55_RS07675 NONE
        yfbR 1686760 .. 1686787 - -15.8  -3.28924   TATCTCTTGTCATAA        TTTATAGCCTGC ACAA GCAGGCTATAAA         GATCAATCCAGTGAA 100 28
        ackA 1680528 .. 1680542 -  -2.8  -2.73681   CACTCACCCGAATCA               TTTACG GGT CGTTAA               CCTTAAAATGAAGAG  42 104
         pta 1678097 .. 1678116 - -10.7  -5.10461   CTGATGTAACAAAAA            CGCCAGC GCAGAG GCTGGCG             TTTCAGACTGCTGAC 100 209
ISU55_RS07630 1676091 .. 1676104 -  -2.3  -2.70932   CGTTCCCCCTAATTA               CTGAC TTGT GTCCG                CTCTTGGGTGCCATC  40 111
ISU55_RS07625 1675350 .. 1675361 -  -3.6  -4.02022   TGGAAGGACTATAAA                GCCG TCAC CAGC                 GGTTTGAAAATGGTG  59 431
ISU55_RS07615 1673093 .. 1673110 - -12.7  -3.62572   TATTATCAGTTTAAA             CCCCCTC CAAG GAGGGGG              TGATGGTGACGTCTT 100 56
ISU55_RS07595 1669479 .. 1669489 -  -3.2  -3.02144   TTAGGGGGGTGAATA                 CCAT TTC ACGG                 TTCACCCCTCACCCC  44 61
ISU55_RS07515 1652842 .. 1652858 -    -5  -2.92938   GGAAATAAGGGAAAC              CCGGCG GTAGG CGCAGG              CCGATATTATGATAC  50 256
         flk 1651462 .. 1651485 -  -3.8  -5.41746   AATTGCTTAAAAAAA          GCATGTGGAA GATA TTCTGCATGC           TTTTTTATATGCTGT  84 307
ISU55_RS07500 1649050 .. 1649069 - -12.2  -3.55761   GATTTACTCCCCAAA            GCCTACGA GAGA TCGTAGGC             TTGAGGTTATTGACA  91 368
        mnmC 1645272 .. 1645284 -  -6.2  -3.30619   AACCAGTCTGGAGAA                GGCC ATCAA GGCC                GGTGAGCTTTCCCCT  55 281
        smrB 1639363 .. 1639375 -  -3.3  -2.61264   CGTGTCATGGATAAG                GCTCA CCA TGGGC                TGTCATGACCAAGCC  42 397
        fadL 1632350 .. 1632377 - -17.2  -4.18018   CCGCCGTATTCAAAA        TAGAAAAGCGCC ATCA GGCGCTTTTCTA         TTGGATAAGGTGATG 100 53
ISU55_RS07360 NONE
ISU55_RS07355 1620133 .. 1620156 -  -2.4  -5.94214   AATAGAATAAAAAAA          TGTCCCAACAC CGA GTGACGG-ACA          CATCGAACTGATACC  90 113
ISU55_RS07350 1619489 .. 1619517 -  -8.9  -3.83921   TCCAAGATAATAGAA        GGGCTCTCTGC TTGGGTG GCAAAGAACCC        ATTAATGCATTAGCT  78 35
ISU55_RS07255 1598163 .. 1598183 -  -2.5  -3.99062   AATACGTAGGAGAAA            CCGATACCA ACC TGACATTGG            CCGCCTATAGATACT  55 118
        tssF NONE
        tssG NONE
ISU55_RS07220 NONE
ISU55_RS07215 NONE
ISU55_RS07210 NONE
ISU55_RS07205 1584146 .. 1584161 -  -2.6  -3.19192   TTTTATTCAATTTAA              CCTTAA ACAT TTAAGA               CAGATCACCTAAATA  44 20
ISU55_RS07200 NONE
ISU55_RS07195 1581943 .. 1581980 - -12.2  -2.73994   ATTCTTCCAATACGA   CCACGTCATGCTAAGT CGGGTT ATTTAGCATGACGTGA    TATCGCTCAAAAATT  83 39
ISU55_RS07180 1577297 .. 1577311 -  -8.5  -3.53091   ACTCGGTTTGTTAAA               CGCCC GCAGG GGGCG               GAGTAAAACGGATTA  71 38
ISU55_RS07175 NONE
ISU55_RS07170 1574479 .. 1574489 -  -5.4  -2.58544   TTTGATCTTGATAAC                 CATC CTG GATG                 TGTTTGTTATTGCCC  47 172
ISU55_RS07160 1573065 .. 1573084 -  -9.3  -4.11346   ACACGTAAATAATAA            GGGATGG TGTAGG CCATCCC             CGAATAAATTAATAC  85 34
ISU55_RS07150 NONE
        dmsB NONE
ISU55_RS07140 1567296 .. 1567315 -  -6.4  -4.60487   GATTAGCCGCAAAAA            TAGCCGCT AATC AGCGGGTA             AATCACCACATGGAA  77 61
ISU55_RS07135 1566284 .. 1566294 -  -2.4  -2.91264   TTTGTCACCGATATA                 GCTC ACG GGGC                 AGAGGAGATAATACC  42 4
ISU55_RS07130 1565656 .. 1565669 -  -6.7  -4.13767   GGCTGCACCCCAAAA               GTTGG ATAC CCAAC                TGAATAAGGTGCAGT  71 63
ISU55_RS07110 1562623 .. 1562648 -  -4.8  -2.57344   TACTTTGCGCAGAAT         GATGCCTGGAA AATGA TCCCAGG-ATC         GGAGATGACAAAGGG  48 110
ISU55_RS07095 1559056 .. 1559086 -  -9.8  -3.78934   GTGGGCGCAGAAGAA       TATCTGCCGGGA GGATAAG TTCCGGCAGATA       TGATGCGGAAGAAGG  84 41
ISU55_RS07080 NONE
ISU55_RS07075 NONE
ISU55_RS07070 1554667 .. 1554679 -  -3.3  -4.28762   ATAATTCCATGAAAA                CCCGC CTG ACAGG                CTTTATTGAGCGATG  61 52
ISU55_RS07060 1551710 .. 1551723 -  -3.7   -5.4492   TATAGATACAAAAAA               GGTGC CGTA GCGCC                TCGTTAAGCGATCGT  84 51
        gltX 1549057 .. 1549075 - -12.4  -5.24129   TCTGGGCACAAAAAA             GGCGACCA GAG TGGCCGCC             TGATAACACGGAAAA 100 50
ISU55_RS07020 1548347 .. 1548371 -  -9.9  -4.53047   ATCAAATATAATAAA          TATCCTCCGGC ATA GCCGGAGGTTT          TTCATATGCGCCTAT 100 103
ISU55_RS07015 1548049 .. 1548077 - -14.7  -3.16068   GTCGGAACTGAAAAG        CAAAAAACCGGCC AAA GGCCGGTCTTTTA        AAGGGTGGTGGAGCT 100 31
ISU55_RS07010 NONE
ISU55_RS07005 1546673 .. 1546688 -    -9  -2.88677   GATAGAAGGATTAGA              CGGCTT AGTG AAGCCG               CTGAAGACCGGCTAA  67 141
        cysZ 1542366 .. 1542384 - -14.6  -3.97139   TAATCCCAATAACAA             GGGCGTGT TAG ACACGCCC             ACCGAAAATGATCAT 100 37
        cysK 1541226 .. 1541241 - -10.4    -5.626   TACTCTACAAAAAAA              GCACCC CAAA GGGTGC               TTTTTTTGCATTTAG 100 55
        ptsH NONE
        ptsI NONE
         crr 1538119 .. 1538137 -   -16   -4.8048   GGCGCATATGAAAAA             CCTCCGGC TAT GCCGGAGG             ATATTTATTATCGGT 100 69
ISU55_RS06935 NONE
        macB 1529803 .. 1529816 -  -6.7   -4.9645   ATGATAACAATAAAA               GGTCA CGGA TGACC                TATCACGATGAAAGC  86 69
ISU55_RS06895 1521327 .. 1521352 - -11.9  -3.66378   CATATCCCATGTAAA         CGCTGAGCCAG CGTA CTGACTCAGCA          TAAATGAACTTTTAT  93 215
ISU55_RS06890 NONE
ISU55_RS06885 1518977 .. 1518990 -  -3.7  -2.65097   ATCAAGACACAATAT               CCCGG TTAT CTGGG                GGGGCAGGAAACTTA  44 96
ISU55_RS06830 1505923 .. 1505948 -    -4  -4.57516   AGATGGAAAGGAAAA         GGTCTCGGGTA TAGGT TACCC-AGCCC         CCACCACAGGGTTAT  66 66
ISU55_RS06825 NONE
ISU55_RS06820 1503972 .. 1503982 -  -8.2  -3.72576   CTGCGTTTTAGCAAA                 CCGG TTA CCGG                 CAGCTATTATTTTGC  70 169
ISU55_RS06805 1501379 .. 1501390 -    -3  -4.35675   AAAAACTGATCAAAA                TCAT GGTG ATGA                 GGGATATTTTGTTTT  61 203
        yapL 1498757 .. 1498784 - -14.2  -5.53991   TATTGAGCAAAAAAA        TGGTCTCCCGCA TTAT CGCGGGAAACCA         CTCATCTGGTATGTT 100 43
        hemF NONE
ISU55_RS06780 1495239 .. 1495255 -  -7.9  -3.04398   GGCGGCCCGTAAAAT              GCGTCAG ACG CTGGCGC              TGGTGAATCAGATGG  62 496
ISU55_RS06770 NONE
ISU55_RS06765 1492637 .. 1492654 -  -4.1  -3.20723   TGTTTATGAAGCCAA             TCTTCTC GCAA GCGAAGA              AAGAGATGAAACGGG  49 444
ISU55_RS06725 1484152 .. 1484162 -  -6.8  -2.51642   ACATCATGTATGAAG                 GCGA TAG TCGC                 TACTTAACCAGGAGC  55 337
        acrD 1480552 .. 1480577 -  -7.6  -4.20783   ATCTGATGCAATAAA         GCGGCATG GTTTTTTCGT CATGCCGC          AGGGGAGAACCGACT  76 85
ISU55_RS06710 1479753 .. 1479770 - -11.3  -2.99854   AAAATAGCCAGAAAG             TAGGGCG GGGA CGCCCTA              GGGTGAGTATTGCGC  83 77
ISU55_RS06705 1478797 .. 1478819 -  -6.9  -4.58283   GAATCCTCGCAAAAA           GGCAGAACC GTAGA GGCACTGCC           TTTTTTATTACCCGC  79 191
ISU55_RS06670 1469923 .. 1469949 -  -5.1  -3.31831   TAAAAGAGAAAATCA        GGCCAGCCACTC ATGC GAA-GGCCAGCC         CCAAGGGAGCAATTA  55 124
ISU55_RS06665 NONE
        dapE NONE
ISU55_RS06655 1467611 .. 1467621 -  -5.4  -3.14136   CCAGTAATCAGCTAA                 CCAT TGC ATGG                 TTAAATTCCTTTGGT  53 91
ISU55_RS06650 1467388 .. 1467399 -  -7.2  -3.63569   TCAATTGGTGAATAA                GGCG GTAG CGCC                 GCATGGAATATTATT  68 51
ISU55_RS06610 NONE
         bcp 1458775 .. 1458786 -  -7.2  -3.12749   TCAATAACCTCAAGA                GCGC CAGA GCGC                 TCTTTTCCGTTAATT  62 69
ISU55_RS06590 1453989 .. 1454001 -  -3.4  -3.93658   AATAGCCCCAAATAA                TCAG GACTT CTGA                TATTTACGAAAACGC  56 13
        arsC 1453124 .. 1453136 -  -3.4  -3.46811   CAGATGATGAAAAAT                TGCA GGCTT TGCA                GTTACGCGCCAAATT  47 415
        purM 1449701 .. 1449734 -  -4.7  -3.61398   CGCCTTGCCGAACAA     CATGATTAATCAGCA ATAT TACGGATTAATGATG      ACTTGCTCAGCACCC  57 10
        purN 1448964 .. 1448983 -    -5  -3.22409   CAAGTACGAAGGGAA            GGTTATTC GGCA GCATAACC             CTGCAACGGCAAACG  51 8
        speG 1448168 .. 1448187 -   -10  -4.20768   ACGGGGAAGAAACAA            TTGGGGCC ATCT GACCCCAA             CGTATTAAGCATTTT  88 30
        ppk1 NONE
         ppx 1437945 .. 1437974 - -16.5  -2.52676   CATGCTGTCAATTGA       CGCACCGGGTGAT GACA ACCACCCGGTGCA        CGATTTTATTAGCGT 100 45
ISU55_RS06520 NONE
        mgtE 1436065 .. 1436097 -  -4.7  -3.18735   TGAACATGGGAGCAA      GTGGATCACTCTCCA AAT CAGGGCGCGACCCAC      CGCCGATGATGGGGA  51 71
        yegD 1434607 .. 1434634 -  -9.9  -5.09204   ATACGCCAACAAAAA        CTCTCAGTGCG AGATAA CTCACTGAGAG         GTGAACATAATAGGG 100 42
ISU55_RS06485 1427897 .. 1427912 -  -4.7  -3.05596   CATTTTTTGACTCAA              TGAGG AAATTA CCTCA               CGTGTGAATGATTTA  50 213
ISU55_RS06480 1426548 .. 1426558 -  -4.6  -3.24597   AAGTGGCAATCAATA                 CGGC ACG GCCA                 TTTGGGGTAGGAATA  53 99
ISU55_RS06475 NONE
ISU55_RS06470 1421762 .. 1421783 -  -3.7  -3.85698   CGGGCGCTGGATAAA           CAGAGCGAA GAAT TTCACTGTG            GCTCCTGTCCGTTCA  56 18
        mdtC NONE
ISU55_RS06460 1416928 .. 1416939 -  -5.8  -2.77899   TGTCTTGATCAACCA                CCCA AAAT TGGG                 CGCGCCAGCCACGGG  53 360
        baeR NONE
ISU55_RS06445 1414573 .. 1414595 -  -7.7  -4.32046   CGTGCAAAAATGAAA           TGCGCGG TTAATGGCC CCGCGCA           GGGATAAGTGGTCGT  79 85
ISU55_RS06440 1412805 .. 1412832 - -13.5  -5.43553   AGGGAAAAAAGAAAA        GGCCAGCCCAA GGGAGA TTGGGCTAGCC         AAGGAGGTGGTTCCT 100 179
        yegS 1411253 .. 1411265 -  -6.2  -2.82449   GCGGAGCAAGACAAG                GGCG GTTCT CGCC                GTGCTCCGCTGTTTA  55 220
ISU55_RS06425 NONE
ISU55_RS06420 1409420 .. 1409454 -  -9.3  -3.01791   ACGTGCGCTGGAACA     GGCCGATACCCTG GAGGTGGGG CAGGGCATCGGGC     CTGTTCATCATTTTC  63 116
ISU55_RS06410 NONE
ISU55_RS06405 1406950 .. 1406961 -  -3.6  -4.02022   TGGAAGGACTATAAA                GCCG TCAC CAGC                 GGTTTGAAAATGGTG  59 421
ISU55_RS06395 NONE
ISU55_RS06390 NONE
ISU55_RS06385 NONE
ISU55_RS06380 NONE
ISU55_RS06375 NONE
ISU55_RS06370 1403059 .. 1403077 -   -16   -4.8048   GGCGCATATGAAAAA             CCTCCGGC TAT GCCGGAGG             ATATTTATTTTTATG 100 86
        xseA 1397077 .. 1397096 -  -2.8  -3.77722   GGTAACTATCAACAA            CAAGCAGA GTGC CCTGATTG             TGCGCAACCTCTGCA  52 305
        yapA 1377716 .. 1377741 - -11.1   -4.7078   TTAATCAGGTAAAAA         GCAGGGAGCCA ATTG CAGCCCCCTGC          GGTTTTTATCAGTCA 100 115
ISU55_RS06280 NONE
ISU55_RS06275 1373752 .. 1373778 - -10.1  -3.82218   AGGCAGAGGAGTAAA        GCGTCCGCGCCA AGGA TGGCGCGG-CTC         GAGCCTACATGGATG  84 238
        suhB 1363125 .. 1363148 -  -8.9   -5.7946   TTCCCAATAAAAAAA          GCCAGTC-GG CTAAC CCTGACTGGC          TTTTTATCTGAAACG 100 56
        csiE 1359852 .. 1359863 -    -3  -3.57106   GCGAACCCAAATGAA                TTAG CCAG CTAA                 GGCAGTTCCAATATG  49 22
        hmpA 1354315 .. 1354340 - -13.4  -2.81218   TGAAATAGCCGAAAT         GCTGATCAGG TACCTT CCTGATCAGC          GGCATTAAGTGCGTA  93 63
ISU55_RS06110 1342285 .. 1342313 -  -7.6  -3.29144   TTATTTTTGGCATAA        CAGCATTAATAA TTTTT TTATGAATGCTG        CTATTTGACTTTTAA  66 190
ISU55_RS06105 1341261 .. 1341272 -    -3  -3.58329   TAAAGACGCCGTAAA                TACA TCCA TGTA                 GGCTCGAGCCGCGCC  51 330
ISU55_RS06100 1341087 .. 1341102 -  -2.6  -3.15544   CCGTACGGTCAGTAA              TTCGTGG CAC CCA-GAA              GAGTGGGGCGAGGAT  42 85
        mltF 1335059 .. 1335071 -  -9.1  -2.91695   CTCATGCGGAAATTA                TGGCG CTA CGCCA                AGGTGGGCAGGCGGT  63 453
ISU55_RS06070 NONE
ISU55_RS06065 1331364 .. 1331382 -   -16   -4.8048   GGCGCATATGAAAAA             CCTCCGGC TAT GCCGGAGG             ATATTTATTGCATAC 100 82
ISU55_RS06020 1322410 .. 1322420 -  -6.8  -4.26076   TTACTGGCACGAAAA                 CTGG CAA CCAG                 AATTGAGGGGCTCAG  71 122
        nadB 1317775 .. 1317798 -  -8.9  -4.08958   AGCGTGAAATAAGAA          TC-GGGCGTC GTAGA GACGCCCTGA          GGTTATTGACAAAGT  83 233
        srmB 1315362 .. 1315379 -  -4.8  -4.78237   TATCTGACAACAAAA             CCGCTA TGTGAG CAGCGG              CTTTGTTGTCGTGCA  74 46
         ung 1311893 .. 1311920 - -10.6  -3.62597   CTGATCTTCCAATAA        CCTCACGGCAGCC GAA GG-TGGCGTGAGG        TTACAGACAACGTCC  82 77
ISU55_RS05930 NONE
ISU55_RS05900 1301505 .. 1301518 -  -5.3  -2.84732   CTGAAATTCACGATA               TACCT CCTG AGGTA                GTATTTTTTAATAAC  50 4
ISU55_RS05895 NONE
        kdpA NONE
        kdpB 1297427 .. 1297456 -  -5.6  -4.07687   ATTTGTGTCTTAAAA       CCGGCCACCGCA TCAGGG TGCGATGGCTGT        GGTTAAACGGTTTAT  68 131
        kdpC NONE
        kdpD NONE
        kdpE NONE
ISU55_RS05865 1292485 .. 1292502 - -11.3   -4.8622   TGGCGCAATTAAAAA             TGACCGC TCAG GCGGTCA              TCTAAGATTAATTTA 100 90
ISU55_RS05845 1288642 .. 1288671 - -15.9  -2.91065   ATCATAGACATCACA       GATAATGCCCCCA TTTT TAGGGGCATTATC        CTACAAGAGGCGACT 100 71
ISU55_RS05815 1283524 .. 1283546 -    -2  -3.37344   GTTTGAGTCAAGTAA           TTGTAGTCTA AAG TAGACAATAA           AATGATAAATATCGC  45 54
        crcB NONE
        crcB 1282628 .. 1282649 -  -7.3  -4.34402   GTGTTTATATCAAAA           CACCCTC GGTTAAGT GAGGGTG            TTTTTTTTGTCACGA  75 62
        hdeB 1280379 .. 1280416 - -12.9  -3.70139   GAAGGCTAACAAATA   GAGACACTCATTAACCG ATAA CGCTTAATGAGTGTCTT    TTTTTTACAGGTTAC 100 75
ISU55_RS05715 NONE
ISU55_RS05710 1262916 .. 1262927 -    -3  -2.99871   TGGGATAGTAAATTA                TAAG AATA CTTA                 AAATTAGGACAATTT  44 474
ISU55_RS05695 NONE
        nrdI NONE
        nrdE NONE
        nrdF 1257673 .. 1257683 -  -2.4  -4.81551   TATCTAGACTAAAAA                 GGAG GGC CGCC                 GTGTGGGGAAATCTT  66 39
        proV NONE
        proW NONE
        proX 1253392 .. 1253411 -  -7.2  -5.28176   GGTAGGGATAAAAAA            CAGATACC CGAA AGTATCTG             TCAGACTGCTGACAA  91 225
ISU55_RS05650 NONE
ISU55_RS05645 1250317 .. 1250327 -  -6.8  -3.02144   TGATGGGTTCTAATA                 CCTG AAT CAGG                 GTACGTGCTTTTAAT  58 454
ISU55_RS05630 1249636 .. 1249660 -  -2.9    -3.695   TGGCAAAATCAAACA         GCCTAACCAT CCCTTC ACGGTT-GGC          ACCAAGGTAATTGAC  50 43
        ybfF 1247629 .. 1247644 -  -2.6  -4.28018   AACACCGCAGCAAAA              TTATAG CGCG CCATAA               TACCCTAGCCAACCG  59 167
        ybfE 1247119 .. 1247148 - -17.3   -3.9978   GCATAAAAGTAATAA       CAGCGTGGCGTAA TCAC TTACACCACGCTG        TTGTGGTAACCGACA 100 44
        fldA 1246172 .. 1246208 -  -9.6  -3.06492   CCAGTGACTGGAACA    GAAACGCTCTGC TGTGAATACTATC GCAGAGCGTTTC    TTGTTGCGGGGAGAT  71 40
         fur 1245380 .. 1245390 -    -4  -4.10161   TAGCAGTGCTTAAAA                 TCTT TAT AAGA                 GTAATGCGATAAAAC  61 45
        nagB NONE
        nagA NONE
ISU55_RS05565 1231587 .. 1231602 -  -5.4  -3.42346   AATAGGTCACTATAA              CATGGC TGTG ACCATG               ACAGTTTCTTTCAAC  57 41
ISU55_RS05560 1230725 .. 1230743 -    -6  -3.67611   GTGATGGCAAGAGAA             TTTGGTGC ACT GCACTAAA             AAGGGGAATTAGGCC  61 75
        asnB 1228566 .. 1228590 - -14.3  -5.47218   GGTGACGTAAAAAAA          CAAGGCCGCCC CAG AGGCGACCTTG          CTATCTATTCTCTAT 100 209
ISU55_RS05550 NONE
ISU55_RS05545 NONE
ISU55_RS05540 NONE
ISU55_RS05535 1227863 .. 1227880 -  -2.8  -3.57792   GTAGCCATCTTTAAA             TCTTTT TTGCTT AAAAGA              TTGTATGGCTGGGAT  50 31
ISU55_RS05530 NONE
ISU55_RS05525 1227670 .. 1227685 -  -8.2   -5.1971   ATGAAAAAGCAAAAA              GCCCGC CGAA GCGAGC               TTTTCTAAATTTGGC 100 37
        miaB 1224359 .. 1224382 -  -6.7  -5.07652   CCCGCTAAAATAAAA          CAGGCACTG ACAATG CAGTGCCTC           GTTACGCGGGCGGGA  86 99
ISU55_RS05510 1223051 .. 1223067 -  -2.1  -2.91474   TAAATCGAGAATAAC              CTGGCTC ACG GAGCCTC              CTGCTCTAGCGGGGT  42 14
        ybeY 1222508 .. 1222536 -  -8.2  -2.65298   GTTAGTGATGATAAT        GTCAGCAGCG GTAGATTCA CGCTACTGAC        GGTTTGGGCCAATTT  63 75
        corC NONE
         lnt 1219742 .. 1219762 - -11.2  -3.11178   GAACTAAGCGGAATA            TAGCCCTG GAGTG CAGGGCTA            TCAGGTATAAATAGA  79 298
ISU55_RS05490 1218262 .. 1218288 - -15.2  -5.60993   GGGTTGACAAAAAAA         TGCGGGGTGG GGAACGA CCACCCCGCA         TCCTGTCTACCAATA 100 90
ISU55_RS05485 NONE
        gltK NONE
ISU55_RS05475 1216008 .. 1216031 - -14.6  -2.95933   AAAAAATAAAAGTGA          CCTCCCCTAC AAAC GCAGGGGAGG           AGAACGAATTAATGC 100 34
        leuS 1212556 .. 1212570 -  -4.2  -3.26307   AACAACGTCAGAATA               CGATGT CGC ACAACG               CCTCCTTGACTTAAC  51 36
        lptE NONE
        holA NONE
        nadD 1210163 .. 1210177 -  -2.7   -3.5393   AGGATGCCGCTGAAA               GCCCG CCGTT CGTGC               TTATTTCACAGGGGG  48 108
        rsfS NONE
        rlmH NONE
        mrdA NONE
        mrdB NONE
        rlpA 1204792 .. 1204803 -  -2.2  -3.65902   CTTATTTCACCCAAA                CAGT TTTA ACCG                 TAACACCCTGTTTGC  49 101
        dacA 1203147 .. 1203164 - -12.7  -3.72405   GCTATAAAATCACAA             CTCCCGC CGGA GCGGGAG              TGACGTACTGTTCGC 100 135
ISU55_RS05415 1202634 .. 1202650 -  -9.3  -2.66435   AGCGCCAGTATACCA              GCCCCGC TGA GTGGGGC              CACTATTTTGACAGT  68 188
        lipB NONE
        lipA 1200650 .. 1200670 - -11.9  -5.93809   GGCTGATAAAAAAAA            CGGATCTCC AAT GGAAATCCG            TTTTTTGGTGGCTGC 100 97
        crcB 1198952 .. 1198969 -  -9.8  -4.61231   CCATATCTTTAAAAA             CCCGCC TTACTG GGCGGG              TTTTTTATGGGTAGC 100 410
ISU55_RS05385 1197767 .. 1197791 -    -5  -4.12188   TTACCATTGCTAAAA          CGTTACCGTT GCTAA AACGATACCG          CTACGATCAGCCTCT  63 198
ISU55_RS05375 1195485 .. 1195498 -  -3.9  -3.54755   ATGTTTTAAACAACA               TTCAA AAAA TTGAA                AATGGCACCAATGGA  51 166
ISU55_RS05370 1194951 .. 1194974 -  -2.5  -3.96068   TTAGGTTAATAATAA          GTTAGCATT AGGTTG AATGATAAC           CATTTAACTTTAATC  54 326
ISU55_RS05360 1193947 .. 1193960 -  -3.8  -3.73775   CGGATGGTTATGAAA               CTCG GGTTGG CGAG                CGGGGGCTTAAGTTA  54 398
ISU55_RS05350 1191785 .. 1191803 -  -7.4  -2.56914   CACTTGATGAATGTA             TGGCGGTT TAC AACCGCGA             GGTGGTCATGGTGCC  55 382
ISU55_RS05295 1177093 .. 1177103 -  -5.4  -3.03035   TAGAAAGACAAGAAC                 CGAA TCT TTCG                 CCGTGCCGTAAAGTT  52 190
ISU55_RS05290 1176073 .. 1176087 -  -5.8  -3.86106   ACAGCAAGTATTAAA               TAAAAC GGA GTTTTA               ATTTGCCCATATCCC  63 23
ISU55_RS05285 1169666 .. 1169684 -   -16   -4.8048   GGCGCATATGAAAAA             CCTCCGGC TAT GCCGGAGG             ATATTTATTTTTCAG 100 41
        pbpC 1166463 .. 1166475 -  -4.7   -2.6155   CGCGGCAAGAGGAAC                CGCCC TCC GGCCG                TTTGCTGGTTACTCA  48 119
ISU55_RS05260 1164077 .. 1164087 -  -4.6  -2.91032   ACAAGAATAAGATTA                 CGAG AAC CCCG                 ATGGAAAATACGATG  50 126
ISU55_RS05255 1163463 .. 1163482 - -10.8  -3.25823   CGTTTCTGATATCAA            GCACACTT TTTC AAGTGTGC             TTGAACATATTTATA  73 97
        yapC 1159560 .. 1159571 -    -3  -3.58329   TAAAGACGCCGTAAA                TACA TCCA TGTA                 GGCTCGAGCCGCGCC  51 146
ISU55_RS05230 1159210 .. 1159221 -    -3   -2.9462   TATTTACTGAAATTA                TCAA ACTA TTGA                 TGAAGGTTGGTTTGT  44 250
ISU55_RS05225 1158477 .. 1158493 -  -2.1  -4.14633   TATTGGCAAAAAAGA              GTTGGGC GAG GCACTAC              AGGATTCGGCTTTCG  55 108
ISU55_RS05210 NONE
ISU55_RS05205 NONE
ISU55_RS05200 1150949 .. 1150960 -  -5.8  -2.77166   GGATCTGAAAAAATT                CCCA GGAA TGGG                 CTGGTCATTGTTGGC  51 309
ISU55_RS05190 NONE
ISU55_RS05185 1147144 .. 1147169 - -13.4  -3.15544   CGTTATTCGGATTAA         CTGGCTTACG GATTAT CGTAAGCCAG          ATGAAATTTGAGCGA 100 54
ISU55_RS05175 NONE
ISU55_RS05170 1144170 .. 1144187 -  -7.7  -2.51888   GCTGAAATCGAATAC             CGGG-AGC AGG GCTTCCCG             TTTTTGGGGGTCTAA  60 193
ISU55_RS05125 NONE
ISU55_RS05120 1136390 .. 1136421 - -12.4  -5.28176   GGGAGCCATAAAAAA      TGGCCGTAAGCTAA ATCA TTAACTTCCGGCCA       TTTTAATATTTTATC 100 52
ISU55_RS05115 NONE
ISU55_RS05110 1135269 .. 1135291 -  -4.8  -3.05384   TTGCTTGCCACGCAA           CCGACCAAAA CGC TCTTGGCTGG           ATTGGTTTTGATTTT  50 235
ISU55_RS05105 1135031 .. 1135047 -  -7.2  -4.89567   GCTTAAAATACAAAA              CCCGCC ATTTA GACGGG              TCAGGTAGTGATTTA  85 38
        folD NONE
        ybcJ 1133546 .. 1133564 -   -16   -4.8048   GGCGCATATGAAAAA             CCTCCGGC TAT GCCGGAGG             ATATTTATTGTTCAA 100 73
        ppiB NONE
ISU55_RS05070 NONE
        purE NONE
        purK 1127605 .. 1127617 -  -3.3  -2.63382   TGGCACAGGTACAAG                TGGGG ATG CGCCA                GCGTAGGCAGGAGTT  40 364
        tesA 1123984 .. 1123995 -  -2.2  -4.43397   CCTTAAAATAAATAA                GCTCC TGG GG-GC                TACCTTAATTACCGC  60 224
ISU55_RS05040 NONE
ISU55_RS05035 1122012 .. 1122034 - -13.4  -4.52703   GAAAGCAGCATAAAA           CTGCGCAGGA TTG CCCCGCGCAG           TAGCAAATGATGGTA 100 76
ISU55_RS05030 NONE
ISU55_RS05025 1120436 .. 1120467 - -18.2  -4.06419   TGCCGTGATAAATAA      CCCGAATCACCTAC CAGA GTAAGTGATTCGGG       CTGTTTGTTTACTGC 100 82
        copA 1116852 .. 1116890 - -17.6   -2.5547   ATTTTGGATATCAAC   GCTCAATGGCGCACAAAA CGA TATTGTGCGCCATTGAGG   TCACTGAAAGCATTT 100 39
ISU55_RS05010 1115420 .. 1115431 -    -3  -2.81326   CATAATGTTAATAAG                TTAC TTCG GTAA                 TGATTAATGTCAGTT  43 168
        ybaK 1114644 .. 1114655 -    -3  -3.58329   TAAAGACGCCGTAAA                TACA TCCA TGTA                 GGCTCGAGCCGCGCC  51 201
ISU55_RS05000 1113964 .. 1113980 -    -3  -4.66987   TAGATCCTAATAAAA             CGTA-CC GTAT GGCTACG              CTCAATTTCAATGCA  65 300
ISU55_RS04990 1110841 .. 1110869 -  -2.6  -3.16881   CATTTATGCGATCAA       TGCGCGATAAAAA TTAA TTTTTATCG-GTA        AATGTCTTCTTTGGC  44 156
ISU55_RS04985 1109002 .. 1109032 -   -14  -3.49102   AGACGCGGGATATAA       GTCAGGGCCAGCAT AGT AAGCTGGCCCTGAT       TGTTTTTATTACAGA 100 70
ISU55_RS04850 1077714 .. 1077727 -  -2.5   -4.4009   TTTTAGTTCAGAAAA               TATTA TAGA TAATA                AATCGTGACCAGCGT  59 70
        rsmS 1077397 .. 1077422 -  -8.3  -2.75267   AAAGCGGGAATAGCA         GAGGCGATGTCG TGC CGAG-TCGCCTC         AGTACACATCAGAAG  64 49
ISU55_RS04825 NONE
ISU55_RS04820 1067877 .. 1067892 - -11.8   -5.1356   GCTCAGCAATAAAAA              GGCCGC TTGC GCGGCC               TTTAGTATGAAATGA 100 58
ISU55_RS04815 NONE
        rpmJ 1067199 .. 1067227 -  -6.7  -5.24551   GCAAATGAATAAAAA       GGCCCGTTG-GC GTTAGT GCACAAAGGGCC        TTTTGGGGACTGATG  88 118
ISU55_RS04805 1066099 .. 1066114 -  -2.6  -3.36968   TACGGAATCTTACAA              TTCATCC GCA GGA-GAA              GGCCTGTCATTACTA  46 4
        tomB NONE
ISU55_RS04795 1065261 .. 1065279 -  -8.9  -3.11999   ATCAAACCCATTGAA             GCCGATA GAGAT TATCGGC             TCAACGTTGTGTGTC  69 60
ISU55_RS04785 1063531 .. 1063545 - -11.4  -3.44146   CGGTCGCACAATCAA               CGGTCC ATG GGACCG               TGAATATTCGTGAAC  77 517
        tesB 1062174 .. 1062204 - -16.3  -3.34242   CATAATAATGATGAA      CTACAGGGGCGATG GTGA CATCGCCCCTGT-G       CTATTTCATTGATTC 100 84
ISU55_RS04745 1054150 .. 1054177 -  -4.9  -3.08812   GTGGTTGTAACAAAG        GGGTGGCTTTAG AAAAA CTAA-GCCACCA        TCTTGATTTAACCTT  48 463
ISU55_RS04735 1051605 .. 1051616 -  -5.8   -3.4277   AGTTAACACGCAGAA                GGGT AGTC ACCC                 TCCATTGGGTTGCTT  59 183
        queC 1050448 .. 1050460 -  -3.4  -2.53876   CCGTATTCCAATGGA                TGGT TGAGC ACCA                AATTGCTTTTATCGT  40 376
ISU55_RS04675 1037804 .. 1037836 -  -3.4  -2.78523   GGCATAATAAATCTA     CCTGCTCTGCCGCAA GGTA TCG-GGCAGAGCATT      CTGTTGAGCAACTAT  43 100
        ampG 1036265 .. 1036292 -  -3.4  -5.59879   GATAAACACAAAAAA        GCCAGTGC ACAAACTGAACA GCACCGGC         TTTATGTCACTTATG  86 48
ISU55_RS04665 1035211 .. 1035241 -  -9.1  -3.51998   GTAAATTAAAATATA      TTTCGAGGTGTCCT AAAT AGG-CACCTCGGAA       TCATTTAGTTATAGT  73 40
        cyoA NONE
        cyoB NONE
ISU55_RS04650 NONE
ISU55_RS04645 1031006 .. 1031020 -  -2.8  -3.05596   CAGCTCTTCAGTCAA               CCATCA TAT TGATGT               TGAGGTTGTACATAA  43 3
        cyoE 1030032 .. 1030062 - -17.7  -4.46072   GGGAACAAATACAAA       GTGGCTGGCAAGA GCGAT TCCTGCCAGCCAC       TTGATTTATTTCACT 100 60
ISU55_RS04635 1028190 .. 1028219 -  -6.3  -3.86944   GGTATAACGACTAAA       GGGGCAACGGCTT TTTC ATGTCTTTGCCCC        TTAATTCTGGCCCTA  65 55
        panE NONE
        yajL 1025581 .. 1025591 -  -3.2  -3.56643   TTGATATCCGTGAAA                 TCGC ACA GCAA                 AGCCGTGAACAAGTC  49 372
        xseB NONE
        ispA NONE
         dxs 1020777 .. 1020795 -   -16   -4.8048   GGCGCATATGAAAAA             CCTCCGGC TAT GCCGGAGG             ATATTTATTGTTTCT 100 105
ISU55_RS04520 1006715 .. 1006731 -  -2.2  -4.08216   CTATTTCGCTGAAAA              GCGCAA GTGGG CTGCAC              TCAGTAGCTATACCG  55 132
ISU55_RS04515 1005873 .. 1005896 - -12.5  -5.44119   TCTAGGGGAAAAAAA          GCCAGTCAG AGTGAA CTGACTGGC           TTGATAGCCCCCGAG 100 66
         ggt 1003614 .. 1003643 - -12.3  -3.35813   CTCCACTCTAATGAA       TATCCCCCATCAA TAGT TCGATAGGGGATA        ATATTTTCAGATACT  95 164
ISU55_RS04500 1002271 .. 1002284 -  -3.8  -3.74693   TCTTACCTTATTAAA               GGGT GATAAA ACCC                GTATGCAAATGGCGC  54 477
        sbcD NONE
ISU55_RS04460  988659 ..  988674 -    -9  -2.80492   CATCAGGATTAATGA              GCCTCA TCCT TGAGGC               TTACCCTGTGGGCTA  67 126
        rdgC  985628 ..  985639 -  -2.2  -2.97439   AAGCGGAGGAAATGA                CAGT AATC ACCG                 GTTCTTTGAAAGTAC  41 401
ISU55_RS04410 NONE
ISU55_RS04405  977353 ..  977367 -  -4.2  -3.75898   AACAAATCAGTGAAA               TCTGTC AAC GACGGA               TGAAAAGTGATCCAC  56 79
ISU55_RS04380 NONE
ISU55_RS04375  971269 ..  971291 - -13.6  -5.26875   TTCTGAATTAAAAAA           CGGGTATTAT AGA ATAATACCCG           CTGATAGAGACGATT 100 39
        pepD  966260 ..  966282 -  -5.5  -3.76952   TTTACGTAAGGTAAA           GCCGAGC CTACACATT GCCCGGC           AGGGCGTTAAGCTAA  59 342
ISU55_RS04355  964008 ..  964048 - -19.1  -3.32844   TTTTTTATCTGACAA  GCAAAGCCCCCGAACGACG CAT CATTGTTCGGGGGCTTTGT  TGCTCAATTATTGTC 100 101
ISU55_RS04310  955443 ..  955464 -  -8.7  -3.91084   TGACCGGTAATGAAA           CCTGGCACA AAAT TGCACCAGG            TGAATTTGCTTTATT  75 36
        fadE  951201 ..  951226 -    -9  -4.82128   TTATTAAACATAAAA         CTAAGCCTCC TTAATG GGAGGCTTGG          TTGATTATTTCGATA 100 65
ISU55_RS04255 NONE
ISU55_RS04250 NONE
        hpxX NONE
ISU55_RS04210  929150 ..  929161 -  -2.2  -4.00042   GGTCCTATCAAATAA                CAGT ACTC ACCG                 GCGCGCTGACCAACC  53 6
        hpxZ NONE
ISU55_RS04200  927077 ..  927101 -  -2.1  -3.01119   AGTTAGCTATAGATA          GATTAGGTTAC AGG GCAAACTCATC          AGTTATGTAACATTA  42 143
ISU55_RS04195 NONE
        ygaH NONE
        mprA  925193 ..  925208 -  -8.2  -3.33766   CATTCATAAACAAAT              GGCACC AAAA GGCGCC               CATTCCCCGTTATGT  69 81
        emrA NONE
        emrB  922047 ..  922101 - -17.3   -3.3095   AGAGACGTTTTAGAA CGGTAAAAATAAAAGGGGGCGCTGA TGAGT TCAGGGCCCCCTTTTTTGTTGACCG CTATTTGGCTAAAAA 100 58
        trxC  920006 ..  920030 - -11.5   -3.5241   GACTCCTGAGAAATA          GCGCCATTCTA ATA TAGAATGGCCC          ACGCCCCGACAGAAA  89 151
ISU55_RS04160 NONE
ISU55_RS04155  916406 ..  916419 -  -4.5  -3.05384   TCTCTTGTTATTTAA               TGGCA AAAC CGCCA                TATCAAAAAAACACT  50 158
        pssA  914989 ..  915005 -  -4.3   -4.3467   AGTGGGAGATGAAAA              CCCGCTA ATT CACCGGG              TTTTATCTTTAAGAC  63 41
ISU55_RS04145  914241 ..  914275 -  -9.2  -4.50627   CAGGCATCAAATAAA     GCCAAGACCCCATGCC CAA AGCGTGGGGTTTTTGC     TGTGCGCGAAACACA  95 368
        bamD  903191 ..  903208 - -12.7  -4.37198   AACCTAAATTGAAAA             CGGCAGC CTGA GCTGCCG              TTGGTGTTTTCATTT 100 53
        raiA  902475 ..  902490 - -11.8  -4.87291   GATGTCAATTAAAAA              CGCGCC CGAA GGCGCG               TTACACCGAAATTAG 100 54
ISU55_RS04075  897680 ..  897698 -  -5.2  -3.14587   TTCCAGAAAATGAGA             GTCACCCA GTG TGGATGGC             GCCCGAATAATTCAA  53 434
        dmsA NONE
        dmsB NONE
ISU55_RS04060  893652 ..  893678 - -15.3  -3.85092   ATGAGGCAGAGCAAA         GCTATTCTGGG CGCTC CCCAGAATAGC         CAAAGTGTCACCGCC 100 50
        dmsD  892461 ..  892471 -  -4.6  -3.88498   GGCGGATACATTAAA                 GGCG TAT CACC                 TATTGCTGGCCAATA  59 401
ISU55_RS04035  887685 ..  887704 -   -15  -2.72043   AATGCCTCCTGAAAG            GAGGGGCG ATGT CGCCCCTC             ATTACGGCTAAAGCG 100 83
ISU55_RS04030 NONE
ISU55_RS04025 NONE
ISU55_RS04020  884202 ..  884214 -  -3.4  -4.42962   GAGACTAAAAAAATA                GCTT TCATC AAGC                CTGTCCGGAGATCCC  63 198
ISU55_RS04015 NONE
ISU55_RS04010 NONE
ISU55_RS04005 NONE
ISU55_RS04000  879239 ..  879254 - -10.4   -3.0395   ACATATTGGTTAACA              GCCCCA GCCA TGGGGC               GGACACTTTACTCTT  76 205
        pncC  875843 ..  875862 -  -5.8  -2.72839   AATTACCGCTAATTA            TACTGTAC AATC ATACAGTA             TCAAGCCTATTTTTA  52 38
        recA  874631 ..  874662 - -18.2   -3.6682   TGTTATTTACTCAAA      CAAACAGACCGCCA CAAG TGACGGTCTGTTTG       TTTACTCCAACTGGT 100 53
        recX  873955 ..  873975 -  -2.6  -4.34263   TTGGAATAAGATAAA            TTTTCTTC AGAAG GAAGTAAA            ATCCCACGTGCATTC  59 39
        alaS  871173 ..  871199 - -11.6  -5.48054   AGGAAAATTAAAAAA         CGCCATACCTAG TAC CGAGATATGGCG         TGTTGATTTAATAGA 100 48
        csrA  870748 ..  870782 -   -15  -5.27206   TAGAGACAATAAAAA     GCAGTAGCGCCTCGTG TTA CACGAGACGCTGCTTC     AAAATCAGTAAGTCG 100 30
ISU55_RS03960 NONE
ISU55_RS03955 NONE
ISU55_RS03950  870111 ..  870121 -  -3.2  -3.93695   TGTATGACTTAGAAA                 GATG GTG CACC                 CAGGAAGATTCGAAC  56 17
ISU55_RS03945  869931 ..  869946 -  -8.2  -4.67635   GCCAAAAGCAGAAAA              CCCCGC TATA GCGAGG               TTCCTTAATATGGTG  91 36
ISU55_RS03940  869759 ..  869774 -  -8.2  -4.67635   GCCAAAAGCAGAAAA              CCCCGC TATA GCGAGG               TTCCTTAATATGGTG  91 36
        yqaB NONE
ISU55_RS03930  868493 ..  868504 -  -4.4  -2.65876   GAAAACCATAACTCA                TCAG CATA CTGA                 AACTGCATAGATGTG  45 64
        gshA NONE
        luxS  866127 ..  866145 -   -16  -3.07307   GAAAGCTTTACTGAA             CCCCCAGC CTA GCTGGGGG             TTTTCTGGGCACAAT 100 98
ISU55_RS03915  865454 ..  865478 -  -9.9  -4.44046   GTCAGTTTAAATAAA          TATCCTCCGGC ATA GCCGGAGGTTT          TTCATATGCGCCTAT 100 103
         ffh  861544 ..  861577 - -18.3  -4.67982   CTTTAGTTAATAAAA     CAACTGGACCCCATC GGGG AACGGGGTCCAGTTG      CAATATAAAAAGCCC 100 196
        rpsP  861256 ..  861267 -  -2.2  -3.78934   GCTTGCTCATAATAA                CCAC CACC GTGA                 CAGATTAAGCTGCTT  51 30
        rimM NONE
        trmD  859867 ..  859878 -  -4.4  -3.65902   CTTACCCTAGGTAAA                CTGA TATA TCAG                 GACCATTTGCGCGCG  54 70
        rplS  859433 ..  859453 - -12.6  -5.24129   TCTGGGCACAAAAAA            GGGCTAGC ACATG GCTAGCCC            CTTCATAAGTATTAA 100 67
ISU55_RS03840 NONE
        tyrA  850488 ..  850516 - -13.2  -5.69473   CACACCATAAAAAAA        GTCATCCCGGCA GGCTG TGCTGGGATGAC        CTATAAAAATCTATC 100 56
ISU55_RS03825  848438 ..  848470 - -11.3  -4.07687   ACCGCGGGTCGAAAA      TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA      TATGCGCCTATAAGG 100 99
ISU55_RS03820  846882 ..  846893 -  -2.2  -2.90615   AGTCTGCCGAAATTA                GCCA TTGA TGAC                 CTCCGCCAGCTGTTG  42 11
ISU55_RS03815  845892 ..  845906 -  -2.8   -2.8733   TTTTTCATAAAACAC               CCCTGT CAG ACAAAG               CCAACATCAGTTTCT  42 16
ISU55_RS03810  844819 ..  844837 -  -7.4   -4.0641   GTTTATCTACATAAA             CAGTTAGC TGC GCTCACTG             GAATCCCAATCACTT  72 35
ISU55_RS03805 NONE
ISU55_RS03800  841957 ..  841975 -    -3  -4.49314   CATCATCAAAAATAA             GCATCAGC AGA GCCAAAGC             GTACCCAGTCACGAG  63 303
ISU55_RS03795  840112 ..  840143 - -10.2  -4.36595   CACTGAAACGGAAAA      GGCCTGAGCTCC GTGAATGA AGAACTCAGGCC       TTGATAGCCGCTTAA 100 94
ISU55_RS03790 NONE
         map  838793 ..  838825 - -13.6  -3.08073   AGCAGCGCTAATACA      TCTGCAGAATGGAG GATAA CTTCATTCTGCAGA      CAACCCCCGATGACG 100 196
ISU55_RS03770 NONE
ISU55_RS03765  832892 ..  832903 -  -4.4  -2.78018   ATTGCTCAGGAATGA                GGAA TATA TTCC                 CCGGTCAAACTTTCC  46 4
ISU55_RS03760  831779 ..  831793 -  -5.8  -2.83271   CTATTTTTATAATTA               TAAACT ATT AGTTTA               AAAAATATATTCTAA  53 279
ISU55_RS03755 NONE
ISU55_RS03750  830905 ..  830917 -  -2.6   -4.2704   CTTATGACGAAGAAA                CACC TACTT GGCG                GGGCTTTTTTTTTAG  59 54
ISU55_RS03745 NONE
        arsB  828847 ..  828869 -  -9.8  -3.15027   ATCCTTCATCAAAAT           GCCAGGAGAG TAA CCCTACTGGC           GGCAATGCTAATAGG  74 140
ISU55_RS03735  827382 ..  827419 -  -5.5  -3.65522   TATTCAGGTGAAGAA   GCGATGTGGGCACTC AGTCACGA GACTGCCCCAATCGC    TATTGGTCTTTTTAT  59 64
        rpiB  822429 ..  822439 -  -8.2  -3.67022   CAAATCAGAAATGAA                 GGGC ACT GCCC                 CGCATCTGAGCTGAA  73 267
        mutS  819091 ..  819118 -  -7.1  -4.05193   GATGAAACACAACAA        CGGTGAACA GATAGATAAA TGTTCACCG         TTTTTTTATGCCTTG  72 239
ISU55_RS03630 NONE
ISU55_RS03625  805809 ..  805829 - -14.7  -3.14931   TCTATGGCTCATTAA            GAGGGCGCT AAG AGCGCCCCC            AGACTGCTGACAAAC 100 224
        queD  800313 ..  800332 -  -5.6  -3.56704   TGCGGATGAAATTAA            GCATCCGG TTGG CCGGTTAC             GAGATATCGAAGCAT  56 435
        barA  788707 ..  788717 -    -4  -2.75708   CGGCCTGAAAAAAGG                 TGAT ATC ATCA                 TGGGGATTAACCAGC  44 325
        mtnN  784688 ..  784706 -    -3  -3.21416   CAGTGGCATCATTAA             CCGCGTTG CGC CAAGGTGG             TTAACATGGCTTTGA  46 3
        btuF NONE
ISU55_RS03530  783166 ..  783189 -  -8.8  -5.03715   AGCATCGCTAAAAAA          CCGCGACCAT GAGA ATGGCAGCGG           TTTTTTATGCTCAAA 100 64
        hemL  779062 ..  779079 -  -9.9  -3.58343   GTCAGCAGTCTGAAA             TCTCCTC CGGA GAGGAGA              TTAGAGGTTATTGAC  80 278
        thpR NONE
        sfsA  768015 ..  768029 -  -7.1  -3.68827   TACGCACTATCGAAA               TCCCC AATAG GGGGA               AAAATCAGGCCGCTA  68 146
        dksA  767461 ..  767490 - -17.9  -3.66803   GTCCAACAGTTCAAA       CACGGTGCCGGAG AGGG CTCTGGCACCGTG        TTACACATTATGCCG 100 60
      gluQRS NONE
        pcnB  764719 ..  764738 -  -6.4  -3.10098   ATCATGGTAAAATTA            TACCCCTT CTTT ACGGGGTA             CTGGCTTGCGTGGGC  57 3
        folK  764138 ..  764148 -  -5.4  -3.29549   ATCAATATAACGTAA                 TGAG TGG CTCA                 ACGCACGGGCAGAGT  55 106
        panB  763176 ..  763187 -  -4.4  -2.53995   AGTTACTGGAATGTA                TGCT CTTC AGCA                 GGATAAATCCCCCCC  45 1
        panC  762076 ..  762089 -  -2.3   -4.2828   TCTCACTCACCAAAA               CCGTT GCTC ATCGG                CGGTCACGGGTTCCG  58 157
        panD  761252 ..  761262 -  -2.4  -4.07568   CCGGTTGCGGTAAAA                 CCGG CAC CCGC                 AGTGATTGAAATGGA  53 193
         can  756723 ..  756738 -  -3.2  -3.05844   CCCGCGATGTGAAGA              TCCTGA AAGA TCTGGA               TGAAGATATCCGTGG  44 456
ISU55_RS03410 NONE
        speE NONE
        speD  751792 ..  751802 -  -3.2  -4.32049   GATAACCCATCAAAA                 GCAA CTC TCGC                 GTTCAATAAAAGTGC  61 338
        yddG  750369 ..  750383 -  -5.6  -2.56596   TGGGGCATGAAGTGA               TCGGCC ATT GGCTGA               ATGAAGAGATCAAAG  47 411
ISU55_RS03355  736906 ..  736936 - -19.8  -3.02511   GGTACTTTGTCAATA       GCCTAGGCCAGCAC TAA GTGCTGGCCTAGGT       AGGGTTAACTAGCGG 100 65
        nadC  733775 ..  733789 -  -2.8  -4.11216   GCGGCACTCGCAAAA               CAGG ATATTGA CCTG               ATAATAATGGCTATC  57 63
        ppdD NONE
        gspE NONE
        hofC  730428 ..  730448 -  -5.5  -3.31792   CCACTAGGTCCATAA            TGAGGTTAT CCA ATAACATCA            CCTAACTGGAATATG  55 10
        coaE NONE
        zapD  727298 ..  727312 -  -2.1  -4.48072   ACACTTATTACAAAA               TCAGC AGCAG GCTAA               TTCAAACGATAAACG  60 11
        yacG  726797 ..  726815 -   -16   -4.8048   GGCGCATATGAAAAA             CCTCCGGC TAT GCCGGAGG             ATATTTATTAAAACA 100 116
ISU55_RS03295 NONE
ISU55_RS03290  724157 ..  724182 - -11.3  -3.68619   TGGAATTTACTGAAA         TTACATCAGAG GATG CTCTGATGCAA          AACCGCTCAGAGTTA  82 190
        pepA  715391 ..  715408 - -11.3  -3.80625   TCTCTACAACGTAAA             GGGCACA AAAA TGTGCCC              TCAGACTGCTAACAA  95 139
ISU55_RS03250 NONE
ISU55_RS03245  711947 ..  711985 - -14.7  -4.66833   GTGCAATGGTAAAAA   GCAGGGGCCATGATAGT GAATA ATTATCATGGCCCCTGG   TGACGACTGACTGAT 100 52
ISU55_RS03240  711320 ..  711334 -    -7  -3.21099   TTTTGTCATCATTAA               GGGTGC ATG GCGCCC               TGAAATTCTTGCAGG  59 57
        argF  709189 ..  709211 -  -5.6  -2.78032   CGGTTGTTAAAATAG           CGGTGAAATA GGC TATCTCACTG           GCCAGCTTGAGCTTC  53 320
ISU55_RS03215 NONE
ISU55_RS03210 NONE
ISU55_RS03205 NONE
ISU55_RS03200  702573 ..  702596 - -10.2  -3.24245   TTATCCACAAGGCAA          CCCGCAGCAC ATCA GGGCTGCGAG           GGGGATGTGGATGCT  78 390
        nrdD NONE
        nrdG  699531 ..  699548 -  -7.7  -2.58544   TGTCATGTTGATAAC             CGGTAAG TTTT CTCACCG              TAATGCTGGCTGTTT  60 225
        phnF NONE
        phnG NONE
        phnH NONE
ISU55_RS03170 NONE
ISU55_RS03165 NONE
        phnK  694472 ..  694497 - -11.9  -2.52543   AGTGCCTGCAATCGA         GCAGGA-GGGCA GGC CGCCCCTCCTGC         ACCTGCGGCTTTGCT  81 277
        phnL NONE
        phnM NONE
        phnN NONE
        phnP  691052 ..  691070 -  -6.7  -3.55444   TTGTTACCGGCTAAA             TGGCGCT TGATT AACGCCA             AAGATGTAGCACAAG  62 139
ISU55_RS03100 NONE
ISU55_RS03095  680611 ..  680621 -  -6.8  -2.93929   AAAACAGAGAGTAGA                 CGAC GAC GTCG                 TAGACGCGGGGCAAA  58 67
ISU55_RS03090  679667 ..  679689 -  -4.1  -3.01712   GGTTGGCGGTGAAGA           TCGCCAATG GGTCG CATTGGCAC           CACTGGCCGTGGAAG  45 481
ISU55_RS03075 NONE
ISU55_RS03070  676688 ..  676732 -   -16    -4.183   TTAAGCGTTAATAAA CATG-AATAACAGGGAGGCCA GCAA TGACCTCCCTGTTATTACTTG ATAAGGCAAGGCCGT 100 41
ISU55_RS03050  669109 ..  669124 - -10.4  -4.82855   GATTAAACGTAAAAA              CCAGCC TTCG GGCTGG               TTCAGACTGCTGACA 100 248
        yhbY  648113 ..  648138 - -10.5  -4.88405   AAGTTGTAAAGAAAA         GTAAAAGGCCG CAAG CGGCCTTTTAT          CAGAACAAAGTGCAT 100 67
        dacB NONE
        pmrA NONE
        pmrB  643808 ..  643832 -  -4.1  -2.68487   GTAAGTACTACATGA          TCTCTGCCGCG AAT CGCGACAATGT          GAATGCATTGTGCTG  43 331
        ispB  639931 ..  639949 - -10.3  -3.93236   CATTAATGGGATAAA             CCCGGAT GGTGA ATCCGGG             TTTCTAAATAATTTC  89 53
ISU55_RS02885  638944 ..  638976 -  -7.8  -5.08178   ATATAGAGATAAAAA      GGGGCTACTG AAAAGAGTACGAA CAGTAGCCCC      TGATATTGTAATGAT  95 123
        argR  636721 ..  636739 -  -7.4  -3.49475   GCGAGGGTGAGATAA             TGCGGC ACATAAG GCCGCA             TTTTACTGCTCGGTG  66 54
        yhcN  635902 ..  635921 - -12.2   -3.6581   ATCATCTTGAAAATA            TGCCCCAT GTTA ATGGGGCA             TTGCAGACTGCTGAC  93 221
         fbp  633195 ..  633215 - -11.1  -5.72622   GTTAGAAATAAAAAA            CAGCGGCTT AAA AGGCCGCTG            TTAGCTTATTTTTGA 100 65
         ppa  632452 ..  632503 -  -9.4  -5.84381   GCAGTAACAAAAAAA CACCGCACAAGGTAAAC-GGCCCTA TTT TGGGGCCTGTTCACGATAGGCGGTG TTTTTTTATAGGCGA 100 50
        msrA  625461 ..  625482 -  -4.4  -2.89881   CAGCGATGGGAGATA           GCAGCAGCG ATGAG CGC-ACTGC           CAGCCTTACACGTTA  46 31
ISU55_RS02830  623820 ..  623839 - -12.1  -2.77658   GAGCAGATTTAATCA            CGGCCCC AACTCA GGGGCCG             TTATGTTTACCGTGA  83 65
ISU55_RS02820 NONE
ISU55_RS02810  619385 ..  619441 - -15.7  -3.02096   TTGAGTAATTATATA TCTATAACATGTATTTATTATACACCT ATA ACATGCATAATAAATGCATGTTATAGA TTGTGATATAACTCC 100 96
        ytfE  618619 ..  618637 - -14.6  -3.62275   ACCGATTATGCCAAA             GGGCGACA GGG TGTCGCCC             TTTGGCGTTTATTTA 100 80
ISU55_RS02795  616771 ..  616798 -    -2  -3.85698   CTCTCTCCTTATAAA        TACGGTTATCTG CCTG CAGATAGCGATA         ACTATCCAAGAAATA  51 118
ISU55_RS02790  616255 ..  616273 -   -16   -4.8048   GGCGCATATGAAAAA             CCTCCGGC TAT GCCGGAGG             ATATTTATTTTGGTT 100 48
ISU55_RS02755 NONE
ISU55_RS02750  611079 ..  611093 -  -2.1  -2.50994   GCCAACGCCAGCAAC               CGTTA CCTGT CAACG               ACGGATGAAAAGTGA  39 84
        bsmA  610431 ..  610450 -  -3.6  -2.55351   CGGGCGCACATTAAC            GCGATA GCAAACAT TATCGC             TACAGCAAGGCCTTA  44 76
        queG  589436 ..  589466 -    -7  -5.40464   CATCAGAAATAAAAA       GTGTATAAATAACC AAT GGGTATTTATACAG       GCGACGCGGGAATAG  89 418
        rsgA  586783 ..  586811 -  -5.8  -4.38141   CGTTAGATAAAATAA        GGGGGCGCATTG TATCG CTCTGCGCCCAC        CCTGTCAGACCCTTC  70 164
         psd NONE
        mscM  582434 ..  582460 -  -5.9  -4.97405   ACTTACAAAAACAAA        TACCCTG-ACCT GTGA AGGCGCAGGGCA         TTTTTATTTCTTACT  82 49
        frdA NONE
ISU55_RS02610 NONE
        frdC NONE
        frdD  577548 ..  577570 - -13.4   -4.0825   GCTTTAACCAAAGAA           CGGCCTGCCA GAA CAGCAGGCCG           CGAATATGGCATGTG 100 51
        epmB  575023 ..  575042 -  -7.9  -2.50589   TCGTAAACAAAGCAG            GGGGATA TTAAGG TATCCCC             TCAGGCTGCTGACAA  60 223
        aspA  569177 ..  569205 - -10.4  -5.04601   GCCAGAAAGTAAAAA       GGCACGC-TG-TCC AGA GGAGCATGCGTGCC       TTAGAGGGCTACCGA 100 50
ISU55_RS02555  567778 ..  567800 - -13.4  -2.56571   GATAGACCGAAGTTA           TTGGGGCGCA TGA TGCGCCCCAT           CAGACAGATTACAGA  91 34
        cutA NONE
ISU55_RS02545  565049 ..  565071 -  -6.2  -2.78715   AAGTGGGGCATTACA           GTTGCCGCTC AAT GACCGGTAAC           TGCGGCACGCTAAAA  51 456
ISU55_RS02525  559642 ..  559652 -  -2.4  -4.86773   CAAAAGTAGGAAAAA                 TCGC CCG GCGC                 TTGCCGTAAAGTTTA  66 53
ISU55_RS02520  559429 ..  559448 - -11.4  -4.84527   TCCAGATACGAAAAA            GCCCCGCT TTGC AGCGAGGC             CTTATAAATAATGGT 100 37
ISU55_RS02510  555568 ..  555583 -  -7.5  -5.05116   TTAGAAATAACAAAA              CCCGC ACATTG GCGGG               TTCGTTGACATTAAA  89 61
        rhaT  553636 ..  553660 - -10.8  -3.76568   TTAGCCATAAGATAA         CGGGCAG-GTT TTTC AACGCTGCCCG          TCAATATCATCATCT  88 94
        rhaB NONE
ISU55_RS02475 NONE
        rhaD NONE
        fucO NONE
        rhaM  546077 ..  546100 -    -8   -2.7497   AGATTAGCTTTAAAC          GGCCGCGCCA CGGA TGGCGCGGTT           CTAGTATTCAGGAAT  61 162
        uvrA NONE
ISU55_RS02425  535820 ..  535847 - -12.7  -2.78395   AAGAAAGTGTAATGA        CAGAGGGCTCC TTAATC GGGGCCCTCTG         TTTTTCAATCATGTA  89 64
         zur  532862 ..  532883 - -10.1  -4.02817   CTCCCAGAATAATAA           GCCGTGCCT GTTG AGGTACGGC            TCTATTTCATGATTC  86 148
        plsB  529077 ..  529095 -   -16  -4.42653   ATGGTATTCAGAAAA             CCCCCTGC TAG GCAGGGGG             CTGTTAAGCATTGAG 100 53
ISU55_RS02315 NONE
ISU55_RS02310  504520 ..  504533 -  -5.3  -3.28446   CACACAAAAAAACAG               GCTTA TTCA TAAGC                AATAACCTCCACACA  55 14
ISU55_RS02305 NONE
ISU55_RS02300 NONE
ISU55_RS02295  501524 ..  501534 -    -4  -2.64274   ACTCTGTGAAACTTA                 TGAT CCC ATCA                 AGTTTAGCCTTTTAG  45 177
ISU55_RS02290  500580 ..  500590 -    -4  -4.10672   TGAATGCAAATTAAA                 TATC GTC GATA                 TAAATCTAATGGCTA  61 236
ISU55_RS02285  499555 ..  499574 -  -3.5  -4.78981   ATCAAGCAAAAGAAA            TGGGGGT TGATAT AGCCCCA             CCCATCAGAGTGAGG  70 137
ISU55_RS02280 NONE
        hutX  497445 ..  497458 -  -6.7  -3.48269   TGCACCAAATATCAA               CCATG GCCT CATGG                TGTTTCCTCTTGTTG  63 57
ISU55_RS02270  496737 ..  496769 -  -7.9  -3.28745   TGGCCAACAACTTAA      TGATAACGACTATCA GTG TGATAAGCATTATCA      GGTATGGTTTGATAT  66 62
ISU55_RS02260  494300 ..  494328 - -10.3  -3.60419   ATTGTCAAATGATAA        TCCGGCAAGCCAC AAA ATGGATTACCGGA        TGAATGATTTCAGAC  82 58
ISU55_RS02255 NONE
ISU55_RS02250 NONE
ISU55_RS02245 NONE
ISU55_RS02240  490140 ..  490150 -    -4  -2.62184   TTGCCCTGGACATGA                 GTTT TGG AAAC                 GTGATTTTACCGGGT  43 450
ISU55_RS02225  486627 ..  486637 -  -4.6  -2.71364   GGATGCCCGCAATTA                 CGGC TAT ACCG                 TGCTGGATATTCAGC  45 156
ISU55_RS02115 NONE
ISU55_RS02110  466307 ..  466351 -  -4.9  -2.76171   ACTCAGCGAATAGTA TCTACCCACTCCCCGTCAGCA TCA TACTGACGGGGAGTTTTTATT TGTCGCCAACATTTA  49 86
         acs  462079 ..  462102 -   -11  -2.64199   GAGGCATCAATTAAG          TTTGCCGCCT ATAT AGGCGGCACA           ATTTACGACGGTGTC  76 28
ISU55_RS02095 NONE
        actP  460052 ..  460065 -  -9.5  -2.56596   TTTGTCAGCAATCTA               GGCCC CTAG GGGCC                TTTTAACCTGTAAAT  68 45
ISU55_RS02080 NONE
ISU55_RS02075  456958 ..  456970 -  -4.8  -2.79589   ACTACAGCAACAGTA                CAGG CGAGC CCTG                TGGCATACCAAAAAG  49 220
        purH  447425 ..  447436 -    -3  -2.86033   CAATTATCAAAATAT                TCAT CTGG ATGA                 CTCCGTGAAGGGGCA  43 77
        purD  446098 ..  446122 -  -5.7  -2.93549   GATCCGCAATAAGTA          GGGCACAGC GCACTAG ACTGTACCC          TTTTAAAGACAGTGA  54 45
         rsd  439883 ..  439904 -  -9.5  -3.72152   GAATTAAAACTACAA           TAGCCTACT TATG AGCAGGCTA            TTCTGCTTGCTCATT  78 90
        thiC NONE
        thiE NONE
ISU55_RS01980 NONE
        thiS NONE
ISU55_RS01970 NONE
        thiH  433667 ..  433688 - -11.6  -4.77165   CTGGGCACAACAAAA           CCCGCATC TTTCGG GATGCGGG            TTTTTGAGAGACGAA 100 285
ISU55_RS01960  432956 ..  432980 -  -9.9  -4.51743   CTACTACCAAATAAA          TATCCTCCGGC ATA GCCGGAGGTTT          TTCATATGCGCCTAT 100 103
ISU55_RS01880  415577 ..  415601 - -11.5  -4.39329   ACTCCAGATAAGAAA          CAAGCTGCATA TTA TAGGCAGCTTG          GTTTTTGGTGTAGAC 100 147
        coaA  414537 ..  414554 -  -9.9  -2.63723   GTCTGATTAATTAAT             GGGAGAT AACT ATCTCCC              GTATAGATTATTTTC  71 33
        fadB NONE
        fadA  397862 ..  397878 -  -5.7  -4.97402   TAAAAGCGATAAAAA              GCCCGCC TCT GACCGGC              GGGGAAATAGCAACT  82 156
        rfaH  394777 ..  394807 - -14.9  -2.66787   CTAAGAGTCACAGCA       TTCAGATAGGCAC TAACT GCGCCTATCTGAA       TGAATTCTATAATGA 100 79
ISU55_RS01700  378121 ..  378134 -  -5.3  -3.38812   TCTGCGTGAAGAACA               GGTTT AATT AAACC                GTTTTACTCTGTGTA  55 73
        metR  374600 ..  374616 -  -3.6  -3.27259   CACAGAGACTACCAA              CCACGG GATTA CAGTGG              GGAATACTCGTCTGG  49 201
ISU55_RS01650  366311 ..  366339 -  -8.3  -3.07088   AGTATGACAGATATA       TACAGCCA-GGA GATAAT TCCATGGCTGTA        TTCATTAAATTAACA  67 63
ISU55_RS01645 NONE
ISU55_RS01640 NONE
ISU55_RS01635 NONE
ISU55_RS01630  361874 ..  361884 -  -2.6  -2.82082   ATTAACGATTAACTA                 TTAA CTA TTAA                 CTTCGAATACCAATG  42 15
ISU55_RS01625  360231 ..  360241 -  -2.6  -3.67417   AGACTTAATGCTAAA                 TATT ACT AATA                 AAAATGGAGATAATC  50 502
        panM  353920 ..  353938 -   -16   -4.8048   GGCGCATATGAAAAA             CCTCCGGC TAT GCCGGAGG             ATATTTATTTTTTTG 100 172
        rsmD NONE
ISU55_RS01555  347123 ..  347142 -  -2.8  -3.78321   TAGAAATAAAGAACA            GCCT-CGGA CTC TCTGGAGGC            AATGAAATAAAGAGC  52 353
ISU55_RS01540  345275 ..  345294 -  -5.7  -2.52519   TGAGGACATGAAGAC            TCGCTCC GTCCGT GGAGCAA             CTTAGTCATGATGTT  52 147
ISU55_RS01535  342126 ..  342140 -  -7.2  -3.33885   AACGCAAACGATTAA               GGTAAA TTC TTTACC               TTGGTTAAGCTATTT  64 521
ISU55_RS01525  341325 ..  341344 -  -2.8   -4.1721   ATTCAGACGCGAAAA            GCAACCTA TCGT TCAGTTGC             CAGCACTGGCTGACC  57 11
        dcrB  340638 ..  340662 - -13.6  -4.72631   AGTAAGTCAATAAAA          CAGAGCGCGA GTGAA CCGCGCTCTG          CTGGGACAGATTATT 100 36
        glpQ  334453 ..  334472 -  -4.4  -5.41143   CATGGGTGAAAAAAA            TCACTATCA GAA TG-TAGTGA            GTCACGTTGAATAAT  81 113
        rhtB  330299 ..  330314 -  -4.6  -3.06133   TAACGGGTTAGCCAA              CGGGGT ATTT AACCCG               GTTGGCTAGCCTGAC  50 48
ISU55_RS01460  326061 ..  326073 -  -5.5  -2.70932   TTGCGTGGCGAATCA                CCCAC GCA GTAGG                TTAAATTAGCCAACC  49 31
        rarD  325043 ..  325087 - -11.7   -5.5604   GCAACGAATAAAAAA GCCCGGTCACTC-A-ATTGGA CTAAC CCCAATATTGAGTAACCGGGC TTTTTTTCGGCATCT 100 40
ISU55_RS01435  320029 ..  320052 -    -3   -3.4072   CAGTGGTGAGCACAA          CCGGTTGCAGG TTG CCTTCC-CCGG          AGAGGGGATTAAGTG  47 191
        cyaY  313518 ..  313534 -  -6.6  -3.76402   AGCTTACCGACCAAA              CAATGC CAGTT GCATTG              ATATGCTGATTTGCA  67 270
ISU55_RS01390  310591 ..  310617 -  -2.3   -5.4477   AAATGCCTAAAAAAA         CAACTGTTGCA ATGAA TACAACGATTG         TAATGGATGCATGAC  78 118
        hemC NONE
        hemD NONE
        hemX NONE
        hemY  306312 ..  306330 -   -16   -4.8048   GGCGCATATGAAAAA             CCTCCGGC TAT GCCGGAGG             ATATTTATTTTGGGT 100 119
        rhlB  284595 ..  284619 -  -4.1  -3.07043   CTGATGACTTGAATA          GGGCAGCCGAG GAT CTCGGTTGCAG          TACGCAAGAATTCGT  49 327
ISU55_RS01250 NONE
ISU55_RS01245  280707 ..  280746 - -13.1  -4.00038   TATGACGAGTATAAA  CATGAAATACGCCAC-CT TTTAT AGCGTGGCGTATTTCAGG  ATTAGCTGCGGTACA 100 27
ISU55_RS01240 NONE
ISU55_RS01235  277955 ..  277966 -  -4.4  -2.80016   TTTCATTACCAATCA                TACC CTTG GGTA                 TTATTTTTCGATATA  46 472
ISU55_RS01230  277033 ..  277061 -  -9.6  -2.52676   TACCTTCTGAAGTCA        TTTACCGAGTGG GTATA CCACCCGGTAAT        AAATACATTTATTAC  68 37
ISU55_RS01225  276256 ..  276269 -  -2.4  -3.57406   CCTGCACCATAAATA               TTCC TTTACC GGAA                AGTTACTGCTAAATA  49 34
ISU55_RS01220  273549 ..  273567 -  -6.7  -3.06696   GGCGGCGGCAATAGA             CCGCAGT GGTAG ACTGCGA             AATGCCGGAAGATAT  58 81
        stbD NONE
ISU55_RS01210  271433 ..  271448 -  -3.2  -3.53444   CTACTCGCCCCCAAA              CTGCCA TTCC CAGCAG               CGCACTTTATTTCAA  49 32
        ilvY  265127 ..  265141 -    -5  -3.32993   CTATTGAGACACCAA               GGATTA TAA CAATCC               CCAAAATGCATCAAT  53 14
ISU55_RS01165 NONE
ISU55_RS01160 NONE
ISU55_RS01155 NONE
ISU55_RS01150  262305 ..  262320 -  -4.7  -2.63149   TAAACTACATAAGAG              GCGAA ATTTTA TTCGC               GTTTCATTTTAACGA  48 18
ISU55_RS01145  261601 ..  261611 -  -4.6  -3.78953   ATTGCCACGATGAAA                 CGGA TAA CCCG                 GCGTTTAAGTTCTTT  56 183
ISU55_RS01110  252507 ..  252521 -   -10  -3.45087   AGTAACGGAAGAAGA               GCAACG GTT CGTTGC               TGTTTGCCGTGGCGA  72 436
        hdfR NONE
ISU55_RS01045 NONE
ISU55_RS01040  237766 ..  237776 -  -4.6  -3.78775   GTGCGCATCAGTAAA                 GCAC GGT GCGC                 CCACGGACAGGCGAG  59 185
ISU55_RS01025  234921 ..  234934 -  -9.5  -3.23733   CTCATGCCACAAAAT               CCCGC TTTG GCGGG                TTTTTGTTTTACACG  72 86
ISU55_RS01010 NONE
ISU55_RS01005  230686 ..  230699 -  -3.9  -3.94471   ATTGGAAAATAAACA               TCAAT CCGT ATTGA                AAGCGTTGGGTAGCC  58 12
        diaA  229804 ..  229817 -  -3.1  -3.24289   ATGGCAAATATGTAA               CCAAC CTTC ATTGG                TGCTCCTTTAATCGT  47 33
        yraP  229175 ..  229202 - -12.7  -5.24129   GTGGTGGATAAAAAA        CGGGCTTGGCG GTTTAG CGCTAAGCCCG         TGATAAATCTTATTT 100 62
        gltB NONE
ISU55_RS00965  217122 ..  217149 - -14.2  -4.48483   TAGAATAAATAGAAA        GGGCGGGTTC TGTGAATT GAACCCGCCC         TAGCGTTTATTGAAT 100 60
ISU55_RS00960  216051 ..  216086 -  -9.6  -3.41602   TTCACCGGATGATAA    GCCGCCGCAACCGCCAC GGA GTGGTGGCCGCC-CGGC    ATTACGCGTGGTTAA  76 197
ISU55_RS00945  214129 ..  214146 -  -4.8  -2.86747   TACTGAGCACAATCA             TGCGGC ACAGCA ACCGCA              AGTTCTGGACATTTA  49 445
ISU55_RS00925  211528 ..  211538 -  -3.2  -4.19735   TGGTCTAAAAGTAAA                 CACC CTT GATG                 TCGTTTGATATAAGG  58 152
        degQ  209985 ..  210003 -   -16   -4.8048   GGCGCATATGAAAAA             CCTCCGGC TAT GCCGGAGG             ATATTTATTTCTGCA 100 43
        degS  208011 ..  208035 -  -8.6  -5.27335   TTCGGTAAATAAAAA          TGCCAGCC GGTGATTGG GGCTGGCA          TTTTTTATGTTTATA 100 122
ISU55_RS00870  201551 ..  201561 -    -4  -3.72989   AAATTTATAGGGAAA                 TGTA TTT TACA                 GCGCACTTATGGGAG  54 21
        kdsD  200274 ..  200287 -  -6.7  -2.73681   CATTCACCCGAATCA               CTGAC TGGT GTCAG                CTCATCGGGATTCAT  57 198
        kdsC NONE
        lptC NONE
        lptA NONE
        lptB NONE
        rpoN  195939 ..  195962 -  -6.7  -2.89564   TGTTTACGCCAGATA          CCGGTGG GAATAAATAT CCACCGG           TATCTGGCTATGTAG  57 395
        ptsN  195162 ..  195175 -  -3.1  -2.83271   TTATCGCCATAATTA               GGAAC CTGC ATTCC                GGCTACAAACCGGGG  43 271
        rapZ NONE
         npr  193751 ..  193767 - -13.7  -6.06529   GACAGACAAAAAAAA              GCCCCTC AAC GAGGGGC              CTTACAGGATCGGTT 100 250
        pyrB NONE
ISU55_RS00810  192135 ..  192153 -  -2.5  -3.61268   TACGTAATGCGGAAA            GGGAT-AT CATA ATGATCCC             GACCATTATAAAGGC  50 115
        ridA  191668 ..  191707 -   -15  -5.05113   CGGAGAGAAATAAAA  TCACCACATGCGGCTGGC GATA ACCCGCCGTATGCGGTGA   TGGGGGAGGGATTAA 100 37
ISU55_RS00800  190841 ..  190871 -  -7.7  -3.29471   CTGGCAGCATAGGAA       TACCCTAACGA ATTTTCTCA CCGTTAGGGTA       TTTTTTACTGCGGTG  66 98
        treR  189650 ..  189663 -  -6.7  -3.06183   TTTATTTTTATGGAA               TGGGA ACGT TCCCA                TTTTGTATTGAAGAT  58 119
        treB  187865 ..  187890 - -13.3  -2.55361   TCATTGAAAAATGAC         CCCGCCAGACGA TCA CCG-CTGGCGGG         AGAACACAACTTATA  91 66
        treC  185853 ..  185885 - -14.1  -5.30339   AGCAAAACATAAAAA      CAACACCCCCACGCC ATA GGAGAGGGGGTGTTA      GAAAATAGCTTAATG 100 309
         rnk  185295 ..  185319 -  -8.5  -2.92656   AAAGTGAGCGATAGA          GGGTAATGGCC TGC GGCGGTTACCC          TCTATTATCTTCTAT  65 112
ISU55_RS00760  181570 ..  181613 -  -9.5  -3.02144   TTACGCCCGCCAACA GTATTGAGTCGGGAGCCGGG AGTGA CCCGGC-CCCGCCCGATTAC TGTTTTTTTTCAGCC  71 22
        aaeR  174409 ..  174423 -  -4.4  -3.49924   CGTAAATTAGCATAA               TAAATA TCT TATTTA               ACAGTTGTTTCTTAT  52 94
ISU55_RS00720 NONE
ISU55_RS00715 NONE
ISU55_RS00710  166951 ..  166969 - -13.2  -4.01078   AAAAGTGACCATAAA             CTCTCCTG AAT CAGGAGAG             CAGATTACCCCCTGG 100 17
ISU55_RS00705 NONE
ISU55_RS00700  164981 ..  164999 -  -2.4  -3.85817   ACTGTTTTCCATAAA            GGGCTCT CCTATC AG-GCCC             TCTGTGGGGCCTGTT  51 172
ISU55_RS00695  160447 ..  160473 -  -9.4  -2.90941   ATGACAGGGTATAGA         GCCTGACCGG GAAGGGG CCGGTTAGGC         TCTGCGGCTAATATT  71 39
ISU55_RS00690 NONE
ISU55_RS00685 NONE
ISU55_RS00680  159136 ..  159167 -  -4.5  -4.57569   CTATCGTTGCAAAAA      GC-GTAACGCTGAC TCCCG GTTAGCATTACAGC      GCACCATCGCCAGGC  68 139
ISU55_RS00675 NONE
ISU55_RS00670  153322 ..  153350 - -19.1  -2.88861   TATTACGGGTATAGA        CACCTTCCCTATT CAA AATAGGGAAGGTG        TTTAAAATTAATAAA 100 41
ISU55_RS00620  138290 ..  138332 -  -6.9  -3.08068   AGAAAAATATGAAAT TTCTACCACCGAGGCAAGT GTGAA ACTGACCTCGGTGGTTGCT GTAACGATTAATTAG  59 92
        msrP NONE
        msrQ  136377 ..  136393 -  -4.4  -4.69435   TCAATAAAAAAAATA              GCGAAC TGTGC GTTCAC              TCATCGATTTACCCC  68 88
        aroQ NONE
        accB  135104 ..  135114 -  -3.2  -3.17212   TTACGATTTTATCAA                 GCAT GGA ACGC                 CTCGTTATTCGATGA  46 30
        accC  133662 ..  133703 - -15.3  -5.26316   TTATGCCATAAAAAA CTGCCCCCCAATATCAGGT TATT ATCCAATATTGGGGGGCAA  TTCAATTAACCGGCC 100 80
ISU55_RS00585 NONE
        panF NONE
        prmA  129315 ..  129327 -  -2.7  -4.07306   ATATTTAATTATAAA                TAACA TCA CGTTA                CGCTTATCTGGTTGA  54 455
        dusB NONE
         fis  127827 ..  127852 -  -6.8  -5.32882   CATTATTATAAAAAA         GGCGCTAACC AATTAA GGATAACGCC          TTTTTAAACAACACC  89 55
ISU55_RS00520  120963 ..  120997 - -11.6  -2.59683   ACGGCATTTGATAAC    CAGTCCGTAGGCATG GGCTAT CA-GCCTACAGACTG     AAAACTGGGGTTAAC  80 61
ISU55_RS00515  120161 ..  120173 -  -2.7  -2.76315   CTAATACGGGGAAAT                GCTTT ACT AAAAC                TGCGGACATAAATGT  42 140
        cspA  119714 ..  119732 -   -16   -4.8048   GGCGCATATGAAAAA             CCTCCGGC TAT GCCGGAGG             ATATTTATTATTCGG 100 109
ISU55_RS00500  117512 ..  117557 -  -6.8  -2.57211   ATCTTTCCTGACAAG CCCGGGTATGAACTGTCC AACTTTATGG GGCCAGTCCATGCGCGGG TTTTTTACGCTTTAA  56 63
        yghU  114881 ..  114906 -    -9  -4.32857   CGCGTGAAAGAGAAA         CACCGCAACGG TATGG CCGC-GCGGTG         TTTTTTTATGTCAGT  86 156
        lpxP  106257 ..  106268 -  -5.8  -3.23532   AGTGAAATTAATACA                GCGA AGGT TCGC                 CAATGGGTCGGGTTT  55 6
ISU55_RS00450  104596 ..  104612 -  -6.5  -2.64616   TGGTGAGTTATATCA              CCTGCGC GCC ACGCAGA              AAATCAGCAATGAAA  52 323
ISU55_RS00435  100318 ..  100341 -  -3.8  -4.54404   TAAATTAACAATAAA          TCTGGCATGC CATG GCATTCAAGA           TAACCAATATAGTTA  65 365
        deoC NONE
ISU55_RS00395 NONE
        rbsD   92671 ..   92692 -  -4.4  -2.84192   GAGATGAGCAGCATA           CGGCCTCCC GTTGT AGGAG-CCG           TATGTGTGTTATCAA  46 111
ISU55_RS00380 NONE
ISU55_RS00375   89450 ..   89464 -  -2.8  -4.85599   TCTACGTGATAAAAA               CAGG TCAACTG CCTG               TTGCCATTAAAACCT  67 15
ISU55_RS00370   89115 ..   89143 - -18.3  -5.38054   TGCCATAAATAAAAA        CCGGGAAGATCCT AAG AAGATCTTCCCGG        TTGTTTTTTGATCGC 100 47
ISU55_RS00340 NONE
ISU55_RS00335   79955 ..   79971 -  -2.3  -3.72027   ATCCTGCATTAATAA              TATCG GGTTTGT CGATA              ATGAGTTCAGGGATA  49 78
ISU55_RS00330   79649 ..   79672 -  -5.4  -3.39506   TATTGCAAAAGAAAT          TAACTTCTTC CTTT GAAGAATTTA           TCAATGGATTGGTCG  54 110
ISU55_RS00235   53852 ..   53863 -  -5.8  -3.38281   GTATGTAAAAGGGAA                CTGC TTGG GCAG                 GGCCTACAGTCGGAA  57 449
ISU55_RS00230   52540 ..   52577 - -13.5  -3.08032   GCGTGGGTAAAACTA   TCCTGCTGGAGAAGC TACCTGAC GCTCCTCCAGCAGGG    AATAAACTTACTCGG 100 33
ISU55_RS00220 NONE
ISU55_RS00215   51271 ..   51286 -    -9  -3.62224   ATATCTTTCCAATAA              GGAGGA ATGA TCCTCC               TTGCTGTCTATTTTC  75 33
        fdhD   39805 ..   39818 -  -6.7  -3.10622   TACGCTTAAAATAAC               CCACT TGTC AGTGG                CCGTATCTTCACGGT  59 222
        sodA   38842 ..   38866 - -15.1  -5.29445   CTTTAACAATAAAAA          TGCCAGCAAGA GGG CCTTGCTGGCA          TGTATCTTTCGTACT 100 115
ISU55_RS00160   36584 ..   36601 -  -2.7  -4.10453   GAAATTCCCTGAAAA             CGAGAAA CCTA TTTATCG              CCAATTATTTCTGAG  57 87
ISU55_RS00155   35926 ..   35938 -  -6.9  -2.94519   AAGAAAAGAAAAATT                CAGGG CAT CCCCG                TTTGTTACCGGAGTA  58 228
ISU55_RS00150   34734 ..   34757 -  -7.4  -4.66456   AAAGAAAAAGAGAAA          CTGGCCGCTGA AAT TCAGC-GCCTG          AAAGAAGTACGGGTA  82 401
ISU55_RS00105 NONE
ISU55_RS00100   23895 ..   23908 -  -3.9  -2.96157   CGGATAAAAAATTGA               TTAAC CCAC GTTAA                CTACATTGGCTAATA  46 297
ISU55_RS00095   23092 ..   23102 -  -3.2  -3.80625   TGCGGATAAGCCAAA                 GGAC ATT ATCC                 GCATGTTTTATCACG  53 86
        ghrB   20835 ..   20868 -  -9.7  -3.35597   TTGACCTGCCAAACA     TCTATTGACCCGC TAAACAGG GCAGGCCAATAGA      ATTGACGGGCGGATG  76 46
ISU55_RS00080   18252 ..   18264 -  -4.9  -3.03624   TGATTAAGTAAATGA                TCATT AAA AATGA                TATAAATAAGACATT  50 298
ISU55_RS00075   17379 ..   17389 -  -5.4  -5.59502   TAAAAAAGTAAAAAA                 CCAT GAA ATGG                 CAAGAGGAGAGAATT  91 315
ISU55_RS00070   15872 ..   15900 -  -5.9  -2.83403   CGCGGGCTATTAAAC        TTCAGGGCAGC GTAATTG GCTGCCCTGTT        TGTATTGGTGAAGGG  53 84
ISU55_RS00050 NONE
ISU55_RS00040 NONE
ISU55_RS00035    8961 ..    9007 - -15.4  -3.05384   GGGTGTTTCATTGAA CCGAACCTCCAGATCATGGAT AAAAAG ATCCAAGATCTGG-GGTTCAG TGCACTTATGGCCCC 100 197
ISU55_RS00030    7301 ..    7315 -  -7.8  -2.76263   GTGATCACCTAATCA               CAGTCG TCT CGACCG               AGCAGGAGGGCTAGC  61 312
