locus-tag class description AK38_RS00025 PF09255 Caf1 Capsule antigen AK38_RS00030 PF13953 PapC C-terminal domain AK38_RS00030 PF00577 Outer membrane usher protein AK38_RS00030 PF13954 PapC N-terminal domain AK38_RS00035 PF02753 Pili assembly chaperone PapD, C-terminal domain AK38_RS00035 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AK38_RS00040 PF12833 Helix-turn-helix domain AK38_RS00040 PF06445 GyrI-like small molecule binding domain AK38_RS00045 PF00872 Transposase, Mutator family AK38_RS00055 PF02371 Transposase IS116/IS110/IS902 family AK38_RS00055 PF01548 Transposase AK38_RS00085 PF13091 PLD-like domain AK38_RS00095 PF04754 Putative transposase, YhgA-like AK38_RS00100 PF00239 Resolvase, N terminal domain AK38_RS00100 PF02796 Helix-turn-helix domain of resolvase AK38_RS00115 PF13614 AAA domain AK38_RS00115 PF18607 ParA helix turn helix domain AK38_RS00120 PF08775 ParB family AK38_RS00120 PF02195 ParB-like nuclease domain AK38_RS00135 PF01555 DNA methylase AK38_RS00145 PF07128 Protein of unknown function (DUF1380) AK38_RS00160 PF06006 Bacterial protein of unknown function (DUF905) AK38_RS00165 PF02195 ParB-like nuclease domain AK38_RS00170 PF00665 Integrase core domain AK38_RS00170 PF02796 Helix-turn-helix domain of resolvase AK38_RS00175 PF01695 IstB-like ATP binding protein AK38_RS00180 PF07733 Bacterial DNA polymerase III alpha NTPase domain AK38_RS00180 PF02811 PHP domain AK38_RS00180 PF14579 Helix-hairpin-helix motif AK38_RS00180 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AK38_RS00210 PF01367 5'-3' exonuclease, C-terminal SAM fold AK38_RS00210 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AK38_RS00220 PF00154 recA bacterial DNA recombination protein AK38_RS00265 PF01051 Initiator Replication protein AK38_RS00365 PF00271 Helicase conserved C-terminal domain AK38_RS00365 PF00270 DEAD/DEAH box helicase AK38_RS00365 PF17191 RecG wedge domain AK38_RS00370 PF02195 ParB-like nuclease domain AK38_RS00370 PF17762 HTH domain found in ParB protein AK38_RS00375 PF17762 HTH domain found in ParB protein AK38_RS00375 PF02195 ParB-like nuclease domain AK38_RS00380 PF00664 ABC transporter transmembrane region AK38_RS00380 PF00005 ABC transporter AK38_RS00380 PF03412 Peptidase C39 family AK38_RS00505 PF07484 Phage Tail Collar Domain AK38_RS00505 PF03335 Phage tail fibre repeat AK38_RS00505 PF08400 Prophage tail fibre N-terminal AK38_RS00505 PF03335 Phage tail fibre repeat AK38_RS00505 PF07484 Phage Tail Collar Domain AK38_RS00505 PF08400 Prophage tail fibre N-terminal AK38_RS00515 PF02413 Caudovirales tail fibre assembly protein, lambda gpK AK38_RS00520 PF01695 IstB-like ATP binding protein AK38_RS00525 PF00665 Integrase core domain AK38_RS00525 PF02796 Helix-turn-helix domain of resolvase AK38_RS00540 PF02195 ParB-like nuclease domain AK38_RS00540 PF18090 Centromere-binding protein HTH domain AK38_RS00550 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH AK38_RS00560 PF09020 YopE, N terminal AK38_RS00560 PF03545 Yersinia virulence determinant (YopE) AK38_RS00565 PF05932 Tir chaperone protein (CesT) family AK38_RS00580 PF01695 IstB-like ATP binding protein AK38_RS00585 PF00665 Integrase core domain AK38_RS00585 PF02796 Helix-turn-helix domain of resolvase AK38_RS00625 PF02796 Helix-turn-helix domain of resolvase AK38_RS00625 PF00239 Resolvase, N terminal domain AK38_RS00630 PF01526 Tn3 transposase DDE domain AK38_RS00630 PF13700 Domain of unknown function (DUF4158) AK38_RS00660 PF18272 single-stranded DNA binding TraI N-terminal subdomain AK38_RS00660 PF07057 DNA helicase TraI AK38_RS00660 PF08751 TrwC relaxase AK38_RS00660 PF18340 DNA relaxase TraI 2B/2B-like domain AK38_RS00680 PF10723 Replication regulatory protein RepB AK38_RS00690 PF02387 IncFII RepA protein family AK38_RS00705 PF09632 Rac1-binding domain AK38_RS00705 PF00069 Protein kinase domain AK38_RS00725 PF00102 Protein-tyrosine phosphatase AK38_RS00725 PF09013 YopH, N-terminal AK38_RS00745 PF09013 YopH, N-terminal AK38_RS00750 PF02108 Flagellar assembly protein FliH AK38_RS00755 PF06578 YOP proteins translocation protein K (YscK) AK38_RS00760 PF01514 Secretory protein of YscJ/FliF family AK38_RS00765 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI AK38_RS00770 PF09025 YopR, type III needle-polymerisation regulator AK38_RS00775 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) AK38_RS00780 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF AK38_RS00785 PF08988 Type III secretion system, cytoplasmic E component of needle AK38_RS00790 PF16693 Inner membrane component of T3SS, periplasmic domain AK38_RS00790 PF16697 Inner membrane component of T3SS, cytoplasmic domain AK38_RS00795 PF00263 Bacterial type II and III secretion system protein AK38_RS00795 PF03958 Bacterial type II/III secretion system short domain AK38_RS00800 PF05932 Tir chaperone protein (CesT) family AK38_RS00805 PF17551 Family of unknown function (DUF5463) AK38_RS00810 PF02311 AraC-like ligand binding domain AK38_RS00810 PF12833 Helix-turn-helix domain AK38_RS00815 PF09619 Type III secretion system lipoprotein chaperone (YscW) AK38_RS00820 PF01312 FlhB HrpN YscU SpaS Family AK38_RS00825 PF01311 Bacterial export proteins, family 1 AK38_RS00830 PF01313 Bacterial export proteins, family 3 AK38_RS00835 PF00813 FliP family AK38_RS00840 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AK38_RS00845 PF02120 Flagellar hook-length control protein FliK AK38_RS00850 PF07321 Type III secretion protein YscO AK38_RS00855 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AK38_RS00855 PF02874 ATP synthase alpha/beta family, beta-barrel domain AK38_RS00855 PF18269 T3SS EscN ATPase C-terminal domain AK38_RS00860 PF07201 HrpJ-like domain AK38_RS00865 PF09059 TyeA AK38_RS00875 PF09474 Type III secretion system YscX (type_III_YscX) AK38_RS00885 PF00771 FHIPEP family AK38_RS00890 PF09621 Type III secretion system regulator (LcrR) AK38_RS00895 PF07216 LcrG protein AK38_RS00900 PF04792 V antigen (LcrV) protein AK38_RS00905 PF07720 Tetratricopeptide repeat AK38_RS00910 PF04888 Secretion system effector C (SseC) like family AK38_RS00915 PF05844 YopD protein AK38_RS00930 PF12468 Type III secretion system leucine rich repeat protein AK38_RS00950 PF05932 Tir chaperone protein (CesT) family AK38_RS00955 PF03543 Yersinia/Haemophilus virulence surface antigen AK38_RS00965 PF05818 Enterobacterial TraT complement resistance protein AK38_RS00985 PF13614 AAA domain AK38_RS00995 PF03717 Penicillin-binding Protein dimerisation domain AK38_RS00995 PF00905 Penicillin binding protein transpeptidase domain AK38_RS01000 PF01098 Cell cycle protein AK38_RS01005 PF03330 Lytic transglycolase AK38_RS01005 PF05036 Sporulation related domain AK38_RS01010 PF00768 D-alanyl-D-alanine carboxypeptidase AK38_RS01010 PF07943 Penicillin-binding protein 5, C-terminal domain AK38_RS01015 PF04359 Protein of unknown function (DUF493) AK38_RS01020 PF03099 Biotin/lipoate A/B protein ligase family AK38_RS01025 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AK38_RS01025 PF04055 Radical SAM superfamily AK38_RS01030 PF02416 mttA/Hcf106 family AK38_RS01040 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AK38_RS01045 PF00313 'Cold-shock' DNA-binding domain AK38_RS01055 PF00196 Bacterial regulatory proteins, luxR family AK38_RS01080 PF00664 ABC transporter transmembrane region AK38_RS01080 PF00005 ABC transporter AK38_RS01090 PF04962 KduI/IolB family AK38_RS01095 PF01261 Xylose isomerase-like TIM barrel AK38_RS01100 PF00294 pfkB family carbohydrate kinase AK38_RS01105 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AK38_RS01105 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AK38_RS01110 PF02653 Branched-chain amino acid transport system / permease component AK38_RS01115 PF00005 ABC transporter AK38_RS01120 PF13407 Periplasmic binding protein domain AK38_RS01130 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AK38_RS01130 PF00205 Thiamine pyrophosphate enzyme, central domain AK38_RS01130 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AK38_RS01135 PF00171 Aldehyde dehydrogenase family AK38_RS01150 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain AK38_RS01150 PF00207 Alpha-2-macroglobulin family AK38_RS01150 PF07703 Alpha-2-macroglobulin bait region domain AK38_RS01150 PF01835 MG2 domain AK38_RS01150 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain AK38_RS01150 PF11974 Bacterial alpha-2-macroglobulin MG3 domain AK38_RS01150 PF17962 Bacterial macroglobulin domain 6 AK38_RS01155 PF06832 Penicillin-Binding Protein C-terminus Family AK38_RS01155 PF00912 Transglycosylase AK38_RS01155 PF00905 Penicillin binding protein transpeptidase domain AK38_RS01170 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AK38_RS01175 PF00356 Bacterial regulatory proteins, lacI family AK38_RS01175 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AK38_RS01180 PF07085 DRTGG domain AK38_RS01180 PF01515 Phosphate acetyl/butaryl transferase AK38_RS01185 PF00871 Acetokinase family AK38_RS01195 PF04217 Protein of unknown function, DUF412 AK38_RS01200 PF03887 YfbU domain AK38_RS01205 PF13419 Haloacid dehalogenase-like hydrolase AK38_RS01210 PF03600 Citrate transporter AK38_RS01210 PF02080 TrkA-C domain AK38_RS01225 PF00155 Aminotransferase class I and II AK38_RS01235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AK38_RS01235 PF03466 LysR substrate binding domain AK38_RS01240 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AK38_RS01245 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AK38_RS01250 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AK38_RS01250 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AK38_RS01260 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AK38_RS01260 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AK38_RS01260 PF10531 SLBB domain AK38_RS01265 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AK38_RS01265 PF00384 Molybdopterin oxidoreductase AK38_RS01265 PF01568 Molydopterin dinucleotide binding domain AK38_RS01265 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AK38_RS01270 PF00146 NADH dehydrogenase AK38_RS01275 PF12838 4Fe-4S dicluster domain AK38_RS01280 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AK38_RS01285 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AK38_RS01290 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AK38_RS01290 PF00361 Proton-conducting membrane transporter AK38_RS01295 PF00361 Proton-conducting membrane transporter AK38_RS01300 PF00361 Proton-conducting membrane transporter AK38_RS01310 PF04074 YhcH/YjgK/YiaL AK38_RS01315 PF01202 Shikimate kinase AK38_RS01320 PF00106 short chain dehydrogenase AK38_RS01330 PF00356 Bacterial regulatory proteins, lacI family AK38_RS01340 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AK38_RS01340 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AK38_RS01345 PF07690 Major Facilitator Superfamily AK38_RS01350 PF03928 Haem-degrading AK38_RS01355 PF00920 Dehydratase family AK38_RS01370 PF05957 Bacterial protein of unknown function (DUF883) AK38_RS01380 PF00425 chorismate binding enzyme AK38_RS01385 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AK38_RS01385 PF16582 Middle domain of thiamine pyrophosphate AK38_RS01385 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AK38_RS01390 PF12697 Alpha/beta hydrolase family AK38_RS01395 PF00378 Enoyl-CoA hydratase/isomerase AK38_RS01400 PF13378 Enolase C-terminal domain-like AK38_RS01405 PF00501 AMP-binding enzyme AK38_RS01405 PF13193 AMP-binding enzyme C-terminal domain AK38_RS01410 PF02885 Glycosyl transferase family, helical bundle domain AK38_RS01415 PF07338 Protein of unknown function (DUF1471) AK38_RS01420 PF05971 RNA methyltransferase AK38_RS01425 PF01695 IstB-like ATP binding protein AK38_RS01430 PF02796 Helix-turn-helix domain of resolvase AK38_RS01430 PF00665 Integrase core domain AK38_RS01435 PF13426 PAS domain AK38_RS01435 PF08447 PAS fold AK38_RS01435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AK38_RS01440 PF00005 ABC transporter AK38_RS01445 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS01450 PF00497 Bacterial extracellular solute-binding proteins, family 3 AK38_RS01460 PF00210 Ferritin-like domain AK38_RS01465 PF13649 Methyltransferase domain AK38_RS01475 PF00892 EamA-like transporter family AK38_RS01480 PF13505 Outer membrane protein beta-barrel domain AK38_RS01500 PF08240 Alcohol dehydrogenase GroES-like domain AK38_RS01500 PF00107 Zinc-binding dehydrogenase AK38_RS01505 PF13407 Periplasmic binding protein domain AK38_RS01510 PF00005 ABC transporter AK38_RS01515 PF02653 Branched-chain amino acid transport system / permease component AK38_RS01520 PF00356 Bacterial regulatory proteins, lacI family AK38_RS01525 PF03466 LysR substrate binding domain AK38_RS01525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AK38_RS01530 PF00180 Isocitrate/isopropylmalate dehydrogenase AK38_RS01535 PF02028 BCCT, betaine/carnitine/choline family transporter AK38_RS01540 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AK38_RS01540 PF00355 Rieske [2Fe-2S] domain AK38_RS01545 PF00111 2Fe-2S iron-sulfur cluster binding domain AK38_RS01545 PF00970 Oxidoreductase FAD-binding domain AK38_RS01545 PF00175 Oxidoreductase NAD-binding domain AK38_RS01550 PF08479 POTRA domain, ShlB-type AK38_RS01550 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AK38_RS01550 PF17287 POTRA domain AK38_RS01555 PF04829 Pre-toxin domain with VENN motif AK38_RS01555 PF13018 Extended Signal Peptide of Type V secretion system AK38_RS01555 PF05860 haemagglutination activity domain AK38_RS01555 PF13332 Hemagglutinin repeat AK38_RS01575 PF13018 Extended Signal Peptide of Type V secretion system AK38_RS01575 PF05860 haemagglutination activity domain AK38_RS01575 PF04829 Pre-toxin domain with VENN motif AK38_RS01575 PF13332 Hemagglutinin repeat AK38_RS01595 PF05860 haemagglutination activity domain AK38_RS01595 PF05594 Haemagluttinin repeat AK38_RS01595 PF04829 Pre-toxin domain with VENN motif AK38_RS01595 PF15526 Novel toxin 21 AK38_RS01595 PF13332 Hemagglutinin repeat AK38_RS01605 PF17912 MalK OB fold domain AK38_RS01605 PF00005 ABC transporter AK38_RS01610 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AK38_RS01610 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AK38_RS01610 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AK38_RS01610 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AK38_RS01615 PF00356 Bacterial regulatory proteins, lacI family AK38_RS01625 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS01630 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS01635 PF04041 beta-1,4-mannooligosaccharide phosphorylase AK38_RS01655 PF00924 Mechanosensitive ion channel AK38_RS01660 PF01867 CRISPR associated protein Cas1 AK38_RS01670 PF09611 CRISPR-associated protein (Cas_Csy1) AK38_RS01675 PF09614 CRISPR-associated protein (Cas_Csy2) AK38_RS01680 PF09615 CRISPR-associated protein (Cas_Csy3) AK38_RS01685 PF09618 CRISPR-associated protein (Cas_Csy4) AK38_RS01690 PF00248 Aldo/keto reductase family AK38_RS01700 PF00083 Sugar (and other) transporter AK38_RS01710 PF03466 LysR substrate binding domain AK38_RS01710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AK38_RS01715 PF03472 Autoinducer binding domain AK38_RS01715 PF00196 Bacterial regulatory proteins, luxR family AK38_RS01720 PF00765 Autoinducer synthase AK38_RS01750 PF01594 AI-2E family transporter AK38_RS01755 PF00196 Bacterial regulatory proteins, luxR family AK38_RS01760 PF01266 FAD dependent oxidoreductase AK38_RS01765 PF00872 Transposase, Mutator family AK38_RS01770 PF13419 Haloacid dehalogenase-like hydrolase AK38_RS01775 PF14002 YniB-like protein AK38_RS01780 PF03881 Fructosamine kinase AK38_RS01790 PF00950 ABC 3 transport family AK38_RS01795 PF00950 ABC 3 transport family AK38_RS01800 PF00005 ABC transporter AK38_RS01805 PF01297 Zinc-uptake complex component A periplasmic AK38_RS01810 PF01464 Transglycosylase SLT domain AK38_RS01815 PF01914 MarC family integral membrane protein AK38_RS01830 PF13619 KTSC domain AK38_RS01835 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AK38_RS01835 PF03129 Anticodon binding domain AK38_RS01835 PF02824 TGS domain AK38_RS01835 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AK38_RS01840 PF00707 Translation initiation factor IF-3, C-terminal domain AK38_RS01840 PF05198 Translation initiation factor IF-3, N-terminal domain AK38_RS01845 PF01632 Ribosomal protein L35 AK38_RS01850 PF00453 Ribosomal protein L20 AK38_RS01855 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AK38_RS01855 PF01409 tRNA synthetases class II core domain (F) AK38_RS01860 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AK38_RS01860 PF01588 Putative tRNA binding domain AK38_RS01860 PF03483 B3/4 domain AK38_RS01860 PF03484 tRNA synthetase B5 domain AK38_RS01860 PF03147 Ferredoxin-fold anticodon binding domain AK38_RS01865 PF00216 Bacterial DNA-binding protein AK38_RS01875 PF01032 FecCD transport family AK38_RS01880 PF00255 Glutathione peroxidase AK38_RS01885 PF00005 ABC transporter AK38_RS01890 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AK38_RS01895 PF00535 Glycosyl transferase family 2 AK38_RS01900 PF01370 NAD dependent epimerase/dehydratase family AK38_RS01900 PF02911 Formyl transferase, C-terminal domain AK38_RS01900 PF00551 Formyl transferase AK38_RS01905 PF01522 Polysaccharide deacetylase AK38_RS01910 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AK38_RS01915 PF00892 EamA-like transporter family AK38_RS01925 PF00877 NlpC/P60 family AK38_RS01930 PF10437 Bacterial lipoate protein ligase C-terminus AK38_RS01930 PF03099 Biotin/lipoate A/B protein ligase family AK38_RS01940 PF00793 DAHP synthetase I family AK38_RS01945 PF03618 Kinase/pyrophosphorylase AK38_RS01950 PF00391 PEP-utilising enzyme, mobile domain AK38_RS01950 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AK38_RS01950 PF02896 PEP-utilising enzyme, TIM barrel domain AK38_RS01960 PF01594 AI-2E family transporter AK38_RS01965 PF13183 4Fe-4S dicluster domain AK38_RS01965 PF01565 FAD binding domain AK38_RS01965 PF02913 FAD linked oxidases, C-terminal domain AK38_RS01970 PF03061 Thioesterase superfamily AK38_RS01980 PF01521 Iron-sulphur cluster biosynthesis AK38_RS01985 PF01458 Uncharacterized protein family (UPF0051) AK38_RS01990 PF00005 ABC transporter AK38_RS01995 PF01458 Uncharacterized protein family (UPF0051) AK38_RS02000 PF00266 Aminotransferase class-V AK38_RS02005 PF02657 Fe-S metabolism associated domain AK38_RS02010 PF03734 L,D-transpeptidase catalytic domain AK38_RS02010 PF17969 L,D-transpeptidase C-terminal domain AK38_RS02010 PF01476 LysM domain AK38_RS02045 PF04728 Lipoprotein leucine-zipper AK38_RS02050 PF02887 Pyruvate kinase, alpha/beta domain AK38_RS02050 PF00224 Pyruvate kinase, barrel domain AK38_RS02065 PF01554 MatE AK38_RS02070 PF00677 Lumazine binding domain AK38_RS02080 PF07690 Major Facilitator Superfamily AK38_RS02085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AK38_RS02085 PF03466 LysR substrate binding domain AK38_RS02090 PF00356 Bacterial regulatory proteins, lacI family AK38_RS02095 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AK38_RS02095 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AK38_RS02100 PF00877 NlpC/P60 family AK38_RS02110 PF00462 Glutaredoxin AK38_RS02115 PF00929 Exonuclease AK38_RS02120 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AK38_RS02125 PF18807 Tripartite Tc toxins repeat AK38_RS02125 PF14431 YwqJ-like deaminase AK38_RS02130 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AK38_RS02135 PF16925 Tetracyclin repressor-like, C-terminal domain AK38_RS02135 PF00440 Bacterial regulatory proteins, tetR family AK38_RS02140 PF00884 Sulfatase AK38_RS02140 PF08019 Phosphoethanolamine transferase EptA/EptB AK38_RS02145 PF06945 Protein of unknown function (DUF1289) AK38_RS02150 PF00248 Aldo/keto reductase family AK38_RS02155 PF01047 MarR family AK38_RS02160 PF05433 Glycine zipper 2TM domain AK38_RS02165 PF03702 Anhydro-N-acetylmuramic acid kinase AK38_RS02170 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme AK38_RS02175 PF01243 Pyridoxamine 5'-phosphate oxidase AK38_RS02175 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AK38_RS02180 PF00579 tRNA synthetases class I (W and Y) AK38_RS02180 PF01479 S4 domain AK38_RS02185 PF08543 Phosphomethylpyrimidine kinase AK38_RS02190 PF02798 Glutathione S-transferase, N-terminal domain AK38_RS02190 PF00043 Glutathione S-transferase, C-terminal domain AK38_RS02195 PF02796 Helix-turn-helix domain of resolvase AK38_RS02195 PF00665 Integrase core domain AK38_RS02200 PF01695 IstB-like ATP binding protein AK38_RS02205 PF11656 YjbD family (DUF3811) AK38_RS02210 PF04893 Yip1 domain AK38_RS02215 PF00854 POT family AK38_RS02225 PF00005 ABC transporter AK38_RS02230 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AK38_RS02230 PF00005 ABC transporter AK38_RS02235 PF12911 N-terminal TM domain of oligopeptide transport permease C AK38_RS02235 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS02240 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS02245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AK38_RS02265 PF00158 Sigma-54 interaction domain AK38_RS02265 PF02954 Bacterial regulatory protein, Fis family AK38_RS02270 PF04012 PspA/IM30 family AK38_RS02275 PF06667 Phage shock protein B AK38_RS02280 PF04024 PspC domain AK38_RS02290 PF04317 YcjX-like family, DUF463 AK38_RS02295 PF05128 Domain of unknown function (DUF697) AK38_RS02300 PF08808 RES domain AK38_RS02305 PF09722 Protein of unknown function (DUF2384) AK38_RS02310 PF18024 Helix-turn-helix domain AK38_RS02310 PF00158 Sigma-54 interaction domain AK38_RS02315 PF01797 Transposase IS200 like AK38_RS02320 PF08534 Redoxin AK38_RS02325 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AK38_RS02325 PF13378 Enolase C-terminal domain-like AK38_RS02330 PF00246 Zinc carboxypeptidase AK38_RS02335 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AK38_RS02340 PF01544 CorA-like Mg2+ transporter protein AK38_RS02355 PF07859 alpha/beta hydrolase fold AK38_RS02355 PF13472 GDSL-like Lipase/Acylhydrolase family AK38_RS02360 PF01171 PP-loop family AK38_RS02365 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AK38_RS02365 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AK38_RS02365 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AK38_RS02365 PF10371 Domain of unknown function AK38_RS02365 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AK38_RS02370 PF00893 Small Multidrug Resistance protein AK38_RS02375 PF02308 MgtC family AK38_RS02380 PF03891 Domain of unknown function (DUF333) AK38_RS02385 PF03724 META domain AK38_RS02390 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AK38_RS02390 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AK38_RS02395 PF11739 Dicarboxylate transport AK38_RS02400 PF13617 YnbE-like lipoprotein AK38_RS02405 PF07027 Protein of unknown function (DUF1318) AK38_RS02410 PF01232 Mannitol dehydrogenase Rossmann domain AK38_RS02410 PF08125 Mannitol dehydrogenase C-terminal domain AK38_RS02415 PF00325 Bacterial regulatory proteins, crp family AK38_RS02415 PF04198 Putative sugar-binding domain AK38_RS02420 PF02525 Flavodoxin-like fold AK38_RS02425 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AK38_RS02425 PF00271 Helicase conserved C-terminal domain AK38_RS02425 PF11898 Domain of unknown function (DUF3418) AK38_RS02425 PF04408 Helicase associated domain (HA2) AK38_RS02425 PF00270 DEAD/DEAH box helicase AK38_RS02440 PF00089 Trypsin AK38_RS02455 PF01292 Prokaryotic cytochrome b561 AK38_RS02460 PF04264 YceI-like domain AK38_RS02490 PF02074 Carboxypeptidase Taq (M32) metallopeptidase AK38_RS02495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AK38_RS02495 PF00672 HAMP domain AK38_RS02495 PF00512 His Kinase A (phospho-acceptor) domain AK38_RS02500 PF00486 Transcriptional regulatory protein, C terminal AK38_RS02500 PF00072 Response regulator receiver domain AK38_RS02510 PF13520 Amino acid permease AK38_RS02515 PF07338 Protein of unknown function (DUF1471) AK38_RS02525 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AK38_RS02525 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AK38_RS02525 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AK38_RS02530 PF02233 NAD(P) transhydrogenase beta subunit AK38_RS02535 PF00582 Universal stress protein family AK38_RS02540 PF00027 Cyclic nucleotide-binding domain AK38_RS02540 PF13545 Crp-like helix-turn-helix domain AK38_RS02545 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AK38_RS02545 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AK38_RS02550 PF00245 Alkaline phosphatase AK38_RS02565 PF13419 Haloacid dehalogenase-like hydrolase AK38_RS02570 PF01842 ACT domain AK38_RS02575 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AK38_RS02575 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AK38_RS02575 PF00205 Thiamine pyrophosphate enzyme, central domain AK38_RS02600 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus AK38_RS02600 PF01048 Phosphorylase superfamily AK38_RS02605 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS02610 PF09084 NMT1/THI5 like AK38_RS02625 PF00356 Bacterial regulatory proteins, lacI family AK38_RS02695 PF00654 Voltage gated chloride channel AK38_RS02705 PF00480 ROK family AK38_RS02710 PF03466 LysR substrate binding domain AK38_RS02710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AK38_RS02715 PF07690 Major Facilitator Superfamily AK38_RS02720 PF05472 DNA replication terminus site-binding protein (Ter protein) AK38_RS02725 PF10415 Fumarase C C-terminus AK38_RS02725 PF00206 Lyase AK38_RS02730 PF01238 Phosphomannose isomerase type I AK38_RS02735 PF06097 Bacterial protein of unknown function (DUF945) AK38_RS02745 PF13593 SBF-like CPA transporter family (DUF4137) AK38_RS02750 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AK38_RS02750 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AK38_RS02755 PF12833 Helix-turn-helix domain AK38_RS02755 PF02311 AraC-like ligand binding domain AK38_RS02760 PF02653 Branched-chain amino acid transport system / permease component AK38_RS02765 PF00005 ABC transporter AK38_RS02770 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AK38_RS02775 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AK38_RS02780 PF02610 L-arabinose isomerase AK38_RS02780 PF11762 L-arabinose isomerase C-terminal domain AK38_RS02785 PF00005 ABC transporter AK38_RS02785 PF03412 Peptidase C39 family AK38_RS02785 PF00664 ABC transporter transmembrane region AK38_RS02795 PF13533 Biotin-lipoyl like AK38_RS02805 PF00005 ABC transporter AK38_RS02805 PF03412 Peptidase C39 family AK38_RS02805 PF00664 ABC transporter transmembrane region AK38_RS02810 PF10754 Protein of unknown function (DUF2569) AK38_RS02815 PF02508 Rnf-Nqr subunit, membrane protein AK38_RS02820 PF04060 Putative Fe-S cluster AK38_RS02825 PF10531 SLBB domain AK38_RS02825 PF13375 RnfC Barrel sandwich hybrid domain AK38_RS02825 PF13237 4Fe-4S dicluster domain AK38_RS02825 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AK38_RS02830 PF12833 Helix-turn-helix domain AK38_RS02830 PF06445 GyrI-like small molecule binding domain AK38_RS02835 PF03116 NQR2, RnfD, RnfE family AK38_RS02840 PF04205 FMN-binding domain AK38_RS02845 PF02508 Rnf-Nqr subunit, membrane protein AK38_RS02850 PF10576 Iron-sulfur binding domain of endonuclease III AK38_RS02850 PF00730 HhH-GPD superfamily base excision DNA repair protein AK38_RS02850 PF00633 Helix-hairpin-helix motif AK38_RS02855 PF01370 NAD dependent epimerase/dehydratase family AK38_RS02860 PF07690 Major Facilitator Superfamily AK38_RS02865 PF17876 Cold shock domain AK38_RS02865 PF08206 Ribonuclease B OB domain AK38_RS02865 PF00773 RNB domain AK38_RS02865 PF00575 S1 RNA binding domain AK38_RS02870 PF13722 5TM C-terminal transporter carbon starvation CstA AK38_RS02870 PF02554 Carbon starvation protein CstA AK38_RS02875 PF04328 Selenoprotein, putative AK38_RS02880 PF00923 Transaldolase/Fructose-6-phosphate aldolase AK38_RS02890 PF00596 Class II Aldolase and Adducin N-terminal domain AK38_RS02895 PF05433 Glycine zipper 2TM domain AK38_RS02900 PF01253 Translation initiation factor SUI1 AK38_RS02905 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AK38_RS02915 PF18073 Rubredoxin metal binding domain AK38_RS02920 PF06305 Lipopolysaccharide assembly protein A domain AK38_RS02925 PF01569 PAP2 superfamily AK38_RS02930 PF00925 GTP cyclohydrolase II AK38_RS02935 PF00694 Aconitase C-terminal domain AK38_RS02935 PF00330 Aconitase family (aconitate hydratase) AK38_RS02945 PF03466 LysR substrate binding domain AK38_RS02945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AK38_RS02950 PF01131 DNA topoisomerase AK38_RS02950 PF01751 Toprim domain AK38_RS02950 PF01396 Topoisomerase DNA binding C4 zinc finger AK38_RS02950 PF08272 Topoisomerase I zinc-ribbon-like AK38_RS02960 PF10692 Protein of unknown function (DUF2498) AK38_RS02965 PF08496 Peptidase family S49 N-terminal AK38_RS02965 PF01343 Peptidase family S49 AK38_RS02970 PF00106 short chain dehydrogenase AK38_RS02975 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AK38_RS02980 PF01479 S4 domain AK38_RS02980 PF00849 RNA pseudouridylate synthase AK38_RS02985 PF01300 Telomere recombination AK38_RS02990 PF02811 PHP domain AK38_RS03005 PF00425 chorismate binding enzyme AK38_RS03005 PF04715 Anthranilate synthase component I, N terminal region AK38_RS03010 PF00117 Glutamine amidotransferase class-I AK38_RS03015 PF02885 Glycosyl transferase family, helical bundle domain AK38_RS03015 PF00591 Glycosyl transferase family, a/b domain AK38_RS03020 PF00218 Indole-3-glycerol phosphate synthase AK38_RS03020 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AK38_RS03025 PF00291 Pyridoxal-phosphate dependent enzyme AK38_RS03030 PF00290 Tryptophan synthase alpha chain AK38_RS03040 PF03922 OmpW family AK38_RS03065 PF04279 Intracellular septation protein A AK38_RS03070 PF03061 Thioesterase superfamily AK38_RS03080 PF03544 Gram-negative bacterial TonB protein C-terminal AK38_RS03085 PF03795 YCII-related domain AK38_RS03100 PF13505 Outer membrane protein beta-barrel domain AK38_RS03105 PF13396 Phospholipase_D-nuclease N-terminal AK38_RS03105 PF13091 PLD-like domain AK38_RS03110 PF04269 Protein of unknown function, DUF440 AK38_RS03125 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AK38_RS03125 PF00005 ABC transporter AK38_RS03130 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AK38_RS03130 PF00005 ABC transporter AK38_RS03135 PF12911 N-terminal TM domain of oligopeptide transport permease C AK38_RS03135 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS03140 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS03145 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AK38_RS03150 PF01914 MarC family integral membrane protein AK38_RS03155 PF00171 Aldehyde dehydrogenase family AK38_RS03155 PF00465 Iron-containing alcohol dehydrogenase AK38_RS03165 PF01695 IstB-like ATP binding protein AK38_RS03170 PF00265 Thymidine kinase AK38_RS03175 PF00816 H-NS histone family AK38_RS03180 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AK38_RS03180 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AK38_RS03180 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AK38_RS03185 PF00072 Response regulator receiver domain AK38_RS03190 PF02810 SEC-C motif AK38_RS03195 PF00551 Formyl transferase AK38_RS03195 PF01842 ACT domain AK38_RS03200 PF00872 Transposase, Mutator family AK38_RS03220 PF03466 LysR substrate binding domain AK38_RS03220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AK38_RS03225 PF03372 Endonuclease/Exonuclease/phosphatase family AK38_RS03230 PF00293 NUDIX domain AK38_RS03235 PF07383 Protein of unknown function (DUF1496) AK38_RS03240 PF01131 DNA topoisomerase AK38_RS03240 PF01751 Toprim domain AK38_RS03245 PF02769 AIR synthase related protein, C-terminal domain AK38_RS03245 PF00586 AIR synthase related protein, N-terminal domain AK38_RS03250 PF00881 Nitroreductase family AK38_RS03255 PF01343 Peptidase family S49 AK38_RS03260 PF17763 Glutaminase/Asparaginase C-terminal domain AK38_RS03260 PF00710 Asparaginase, N-terminal AK38_RS03265 PF00857 Isochorismatase family AK38_RS03270 PF07023 Protein of unknown function (DUF1315) AK38_RS03275 PF01641 SelR domain AK38_RS03280 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AK38_RS03280 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AK38_RS03285 PF01263 Aldose 1-epimerase AK38_RS03290 PF06629 MltA-interacting protein MipA AK38_RS03295 PF06798 PrkA serine protein kinase C-terminal domain AK38_RS03295 PF08298 PrkA AAA domain AK38_RS03300 PF04285 Protein of unknown function (DUF444) AK38_RS03310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AK38_RS03310 PF03466 LysR substrate binding domain AK38_RS03315 PF05726 Pirin C-terminal cupin domain AK38_RS03315 PF02678 Pirin AK38_RS03320 PF07690 Major Facilitator Superfamily AK38_RS03325 PF01266 FAD dependent oxidoreductase AK38_RS03330 PF04293 SpoVR like protein AK38_RS03335 PF07840 FadR C-terminal domain AK38_RS03335 PF00392 Bacterial regulatory proteins, gntR family AK38_RS03340 PF06450 Bacterial Na+/H+ antiporter B (NhaB) AK38_RS03345 PF02600 Disulfide bond formation protein DsbB AK38_RS03360 PF00266 Aminotransferase class-V AK38_RS03370 PF00872 Transposase, Mutator family AK38_RS03380 PF02413 Caudovirales tail fibre assembly protein, lambda gpK AK38_RS03545 PF00872 Transposase, Mutator family AK38_RS03610 PF06530 Phage antitermination protein Q AK38_RS03620 PF05772 NinB protein AK38_RS03660 PF00589 Phage integrase family AK38_RS03660 PF12167 Arm DNA-binding domain AK38_RS03665 PF03692 Putative zinc- or iron-chelating domain AK38_RS03670 PF01557 Fumarylacetoacetate (FAA) hydrolase family AK38_RS03675 PF13406 Transglycosylase SLT domain AK38_RS03680 PF05166 YcgL domain AK38_RS03685 PF03775 Septum formation inhibitor MinC, C-terminal domain AK38_RS03685 PF05209 Septum formation inhibitor MinC, N-terminal domain AK38_RS03690 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AK38_RS03695 PF03776 Septum formation topological specificity factor MinE AK38_RS03700 PF00570 HRDC domain AK38_RS03700 PF01612 3'-5' exonuclease AK38_RS03705 PF13193 AMP-binding enzyme C-terminal domain AK38_RS03705 PF00501 AMP-binding enzyme AK38_RS03710 PF03843 Outer membrane lipoprotein Slp family AK38_RS03715 PF00814 Glycoprotease family AK38_RS03720 PF04851 Type III restriction enzyme, res subunit AK38_RS03720 PF13307 Helicase C-terminal domain AK38_RS03725 PF01042 Endoribonuclease L-PSP AK38_RS03730 PF00893 Small Multidrug Resistance protein AK38_RS03735 PF00893 Small Multidrug Resistance protein AK38_RS03740 PF01081 KDPG and KHG aldolase AK38_RS03745 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AK38_RS03745 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AK38_RS03750 PF01418 Helix-turn-helix domain, rpiR family AK38_RS03750 PF01380 SIS domain AK38_RS03755 PF02887 Pyruvate kinase, alpha/beta domain AK38_RS03755 PF00224 Pyruvate kinase, barrel domain AK38_RS03760 PF03279 Bacterial lipid A biosynthesis acyltransferase AK38_RS03765 PF01551 Peptidase family M23 AK38_RS03765 PF01476 LysM domain AK38_RS03765 PF08525 Opacity-associated protein A N-terminal motif AK38_RS03770 PF01297 Zinc-uptake complex component A periplasmic AK38_RS03775 PF00005 ABC transporter AK38_RS03780 PF00950 ABC 3 transport family AK38_RS03785 PF05496 Holliday junction DNA helicase RuvB P-loop domain AK38_RS03785 PF17864 RuvB AAA lid domain AK38_RS03785 PF05491 RuvB C-terminal winged helix domain AK38_RS03790 PF07499 RuvA, C-terminal domain AK38_RS03790 PF01330 RuvA N terminal domain AK38_RS03795 PF02075 Crossover junction endodeoxyribonuclease RuvC AK38_RS03800 PF01709 Transcriptional regulator AK38_RS03805 PF00293 NUDIX domain AK38_RS03810 PF02938 GAD domain AK38_RS03810 PF00152 tRNA synthetases class II (D, K and N) AK38_RS03810 PF01336 OB-fold nucleic acid binding domain AK38_RS03815 PF01904 Protein of unknown function DUF72 AK38_RS03820 PF01124 MAPEG family AK38_RS03825 PF13649 Methyltransferase domain AK38_RS03830 PF08003 Protein of unknown function (DUF1698) AK38_RS03835 PF03932 CutC family AK38_RS03840 PF06185 YecM protein AK38_RS03850 PF03485 Arginyl tRNA synthetase N terminal domain AK38_RS03850 PF05746 DALR anticodon binding domain AK38_RS03850 PF00750 tRNA synthetases class I (R) AK38_RS03855 PF05860 haemagglutination activity domain AK38_RS03855 PF13332 Hemagglutinin repeat AK38_RS03860 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AK38_RS03860 PF17287 POTRA domain AK38_RS03860 PF08479 POTRA domain, ShlB-type AK38_RS03865 PF03023 Lipid II flippase MurJ AK38_RS03875 PF13302 Acetyltransferase (GNAT) domain AK38_RS03880 PF07690 Major Facilitator Superfamily AK38_RS03885 PF07273 Protein of unknown function (DUF1439) AK38_RS03890 PF02613 Nitrate reductase delta subunit AK38_RS03895 PF02811 PHP domain AK38_RS03905 PF00480 ROK family AK38_RS03905 PF01325 Iron dependent repressor, N-terminal DNA binding domain AK38_RS03910 PF03009 Glycerophosphoryl diester phosphodiesterase family AK38_RS03925 PF08402 TOBE domain AK38_RS03925 PF00005 ABC transporter AK38_RS03930 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS03935 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS03945 PF03009 Glycerophosphoryl diester phosphodiesterase family AK38_RS03965 PF02796 Helix-turn-helix domain of resolvase AK38_RS03965 PF00665 Integrase core domain AK38_RS03970 PF01695 IstB-like ATP binding protein AK38_RS03975 PF01740 STAS domain AK38_RS03975 PF00916 Sulfate permease family AK38_RS03980 PF01797 Transposase IS200 like AK38_RS03985 PF00793 DAHP synthetase I family AK38_RS03990 PF13369 Transglutaminase-like superfamily AK38_RS03995 PF04247 Invasion gene expression up-regulator, SirB AK38_RS04000 PF17827 PrmC N-terminal domain AK38_RS04000 PF13847 Methyltransferase domain AK38_RS04005 PF03462 PCRF domain AK38_RS04005 PF00472 RF-1 domain AK38_RS04010 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AK38_RS04010 PF01488 Shikimate / quinate 5-dehydrogenase AK38_RS04010 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AK38_RS04015 PF03550 Outer membrane lipoprotein LolB AK38_RS04020 PF00288 GHMP kinases N terminal domain AK38_RS04020 PF08544 GHMP kinases C terminal AK38_RS04030 PF14572 Phosphoribosyl synthetase-associated domain AK38_RS04030 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AK38_RS04040 PF10762 Protein of unknown function (DUF2583) AK38_RS04045 PF01195 Peptidyl-tRNA hydrolase AK38_RS04050 PF01926 50S ribosome-binding GTPase AK38_RS04050 PF06071 Protein of unknown function (DUF933) AK38_RS04095 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AK38_RS04100 PF00072 Response regulator receiver domain AK38_RS04100 PF00486 Transcriptional regulatory protein, C terminal AK38_RS04105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AK38_RS04105 PF00512 His Kinase A (phospho-acceptor) domain AK38_RS04105 PF00672 HAMP domain AK38_RS04145 PF08242 Methyltransferase domain AK38_RS04170 PF00872 Transposase, Mutator family AK38_RS04215 PF01370 NAD dependent epimerase/dehydratase family AK38_RS04235 PF05962 HutD AK38_RS04240 PF01979 Amidohydrolase family AK38_RS04245 PF00392 Bacterial regulatory proteins, gntR family AK38_RS04245 PF07702 UTRA domain AK38_RS04250 PF01979 Amidohydrolase family AK38_RS04270 PF00665 Integrase core domain AK38_RS04270 PF02796 Helix-turn-helix domain of resolvase AK38_RS04300 PF08402 TOBE domain AK38_RS04300 PF00005 ABC transporter AK38_RS04305 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS04310 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS04320 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AK38_RS04320 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AK38_RS04330 PF07702 UTRA domain AK38_RS04330 PF00392 Bacterial regulatory proteins, gntR family AK38_RS04415 PF05638 Type VI secretion system effector, Hcp AK38_RS04460 PF01066 CDP-alcohol phosphatidyltransferase AK38_RS04465 PF08459 UvrC Helix-hairpin-helix N-terminal AK38_RS04465 PF02151 UvrB/uvrC motif AK38_RS04465 PF01541 GIY-YIG catalytic domain AK38_RS04470 PF00072 Response regulator receiver domain AK38_RS04470 PF00196 Bacterial regulatory proteins, luxR family AK38_RS04475 PF10769 Protein of unknown function (DUF2594) AK38_RS04480 PF06942 GlpM protein AK38_RS04490 PF13505 Outer membrane protein beta-barrel domain AK38_RS04500 PF00324 Amino acid permease AK38_RS04505 PF01344 Kelch motif AK38_RS04510 PF03358 NADPH-dependent FMN reductase AK38_RS04515 PF04261 Dyp-type peroxidase family AK38_RS04520 PF13473 Cupredoxin-like domain AK38_RS04520 PF09375 Imelysin AK38_RS04525 PF03239 Iron permease FTR1 family AK38_RS04530 PF00474 Sodium:solute symporter family AK38_RS04540 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AK38_RS04540 PF00171 Aldehyde dehydrogenase family AK38_RS04540 PF01619 Proline dehydrogenase AK38_RS04540 PF14850 DNA-binding domain of Proline dehydrogenase AK38_RS04570 PF00291 Pyridoxal-phosphate dependent enzyme AK38_RS04575 PF02899 Phage integrase, N-terminal SAM-like domain AK38_RS04580 PF04545 Sigma-70, region 4 AK38_RS04580 PF04539 Sigma-70 region 3 AK38_RS04580 PF04542 Sigma-70 region 2 AK38_RS04585 PF08884 Flagellin D3 domain AK38_RS04585 PF00700 Bacterial flagellin C-terminal helical region AK38_RS04585 PF00669 Bacterial flagellin N-terminal helical region AK38_RS04590 PF07195 Flagellar hook-associated protein 2 C-terminus AK38_RS04590 PF02465 Flagellar hook-associated protein 2 N-terminus AK38_RS04590 PF07196 Flagellin hook IN motif AK38_RS04595 PF02561 Flagellar protein FliS AK38_RS04600 PF05400 Flagellar protein FliT AK38_RS04610 PF12833 Helix-turn-helix domain AK38_RS04615 PF00672 HAMP domain AK38_RS04615 PF02743 Cache domain AK38_RS04615 PF00211 Adenylate and Guanylate cyclase catalytic domain AK38_RS04620 PF01966 HD domain AK38_RS04625 PF00730 HhH-GPD superfamily base excision DNA repair protein AK38_RS04640 PF02049 Flagellar hook-basal body complex protein FliE AK38_RS04645 PF08345 Flagellar M-ring protein C-terminal AK38_RS04645 PF01514 Secretory protein of YscJ/FliF family AK38_RS04650 PF14841 FliG middle domain AK38_RS04650 PF01706 FliG C-terminal domain AK38_RS04650 PF14842 FliG N-terminal domain AK38_RS04655 PF02108 Flagellar assembly protein FliH AK38_RS04660 PF18269 T3SS EscN ATPase C-terminal domain AK38_RS04660 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AK38_RS04665 PF02050 Flagellar FliJ protein AK38_RS04670 PF02120 Flagellar hook-length control protein FliK AK38_RS04675 PF03748 Flagellar basal body-associated protein FliL AK38_RS04680 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AK38_RS04680 PF02154 Flagellar motor switch protein FliM AK38_RS04685 PF16973 Flagellar motor switch protein FliN N-terminal AK38_RS04685 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AK38_RS04690 PF04347 Flagellar biosynthesis protein, FliO AK38_RS04695 PF00813 FliP family AK38_RS04700 PF01313 Bacterial export proteins, family 3 AK38_RS04705 PF01311 Bacterial export proteins, family 1 AK38_RS04720 PF00294 pfkB family carbohydrate kinase AK38_RS04725 PF02653 Branched-chain amino acid transport system / permease component AK38_RS04730 PF00005 ABC transporter AK38_RS04735 PF13407 Periplasmic binding protein domain AK38_RS04740 PF02653 Branched-chain amino acid transport system / permease component AK38_RS04745 PF00596 Class II Aldolase and Adducin N-terminal domain AK38_RS04750 PF04198 Putative sugar-binding domain AK38_RS04755 PF00669 Bacterial flagellin N-terminal helical region AK38_RS04760 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AK38_RS04760 PF00460 Flagella basal body rod protein AK38_RS04765 PF10135 Rod binding protein AK38_RS04765 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AK38_RS04770 PF02119 Flagellar P-ring protein AK38_RS04775 PF02107 Flagellar L-ring protein AK38_RS04780 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AK38_RS04780 PF00460 Flagella basal body rod protein AK38_RS04790 PF07559 Flagellar basal body protein FlaE AK38_RS04790 PF00460 Flagella basal body rod protein AK38_RS04790 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AK38_RS04795 PF13861 FlgD Tudor-like domain AK38_RS04795 PF03963 Flagellar hook capping protein - N-terminal region AK38_RS04795 PF13860 FlgD Ig-like domain AK38_RS04800 PF00460 Flagella basal body rod protein AK38_RS04800 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AK38_RS04805 PF00460 Flagella basal body rod protein AK38_RS04810 PF13144 Chaperone for flagella basal body P-ring formation AK38_RS04810 PF17656 FlgA N-terminal domain AK38_RS04815 PF04316 Anti-sigma-28 factor, FlgM AK38_RS04820 PF05130 FlgN protein AK38_RS04840 PF06366 Flagellar protein FlhE AK38_RS04845 PF00771 FHIPEP family AK38_RS04850 PF01312 FlhB HrpN YscU SpaS Family AK38_RS04870 PF10709 Protein of unknown function (DUF2511) AK38_RS04880 PF04234 CopC domain AK38_RS04885 PF00210 Ferritin-like domain AK38_RS04890 PF06440 DNA polymerase III, theta subunit AK38_RS04895 PF00561 alpha/beta hydrolase fold AK38_RS04900 PF00326 Prolyl oligopeptidase family AK38_RS04900 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AK38_RS04905 PF13995 YebF-like protein AK38_RS04915 PF07130 YebG protein AK38_RS04920 PF03880 DbpA RNA binding domain AK38_RS04920 PF00270 DEAD/DEAH box helicase AK38_RS04920 PF00271 Helicase conserved C-terminal domain AK38_RS04925 PF02222 ATP-grasp domain AK38_RS04930 PF03701 Uncharacterised protein family (UPF0181) AK38_RS04935 PF04715 Anthranilate synthase component I, N terminal region AK38_RS04935 PF00425 chorismate binding enzyme AK38_RS04940 PF00293 NUDIX domain AK38_RS04945 PF03313 Serine dehydratase alpha chain AK38_RS04945 PF03315 Serine dehydratase beta chain AK38_RS04950 PF01613 Flavin reductase like domain AK38_RS04955 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal AK38_RS04955 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal AK38_RS04960 PF07690 Major Facilitator Superfamily AK38_RS04965 PF03328 HpcH/HpaI aldolase/citrate lyase family AK38_RS04970 PF01557 Fumarylacetoacetate (FAA) hydrolase family AK38_RS04975 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase AK38_RS04980 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AK38_RS04985 PF00171 Aldehyde dehydrogenase family AK38_RS04990 PF01557 Fumarylacetoacetate (FAA) hydrolase family AK38_RS04995 PF01557 Fumarylacetoacetate (FAA) hydrolase family AK38_RS05000 PF01047 MarR family AK38_RS05005 PF03741 Integral membrane protein TerC family AK38_RS05005 PF03471 Transporter associated domain AK38_RS05010 PF03610 PTS system fructose IIA component AK38_RS05010 PF03830 PTS system sorbose subfamily IIB component AK38_RS05015 PF03609 PTS system sorbose-specific iic component AK38_RS05020 PF03613 PTS system mannose/fructose/sorbose family IID component AK38_RS05025 PF06173 Protein of unknown function (DUF986) AK38_RS05030 PF02659 Putative manganese efflux pump AK38_RS05035 PF00593 TonB dependent receptor AK38_RS05035 PF07715 TonB-dependent Receptor Plug Domain AK38_RS05040 PF05231 MASE1 AK38_RS05040 PF08448 PAS fold AK38_RS05040 PF13426 PAS domain AK38_RS05040 PF00563 EAL domain AK38_RS05040 PF00990 Diguanylate cyclase, GGDEF domain AK38_RS05040 PF08447 PAS fold AK38_RS05065 PF13847 Methyltransferase domain AK38_RS05075 PF00313 'Cold-shock' DNA-binding domain AK38_RS05080 PF10736 Protein of unknown function (DUF2627) AK38_RS05090 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP AK38_RS05095 PF00324 Amino acid permease AK38_RS05110 PF13974 YebO-like protein AK38_RS05115 PF13996 YobH-like protein AK38_RS05120 PF10964 Protein of unknown function (DUF2766) AK38_RS05130 PF12833 Helix-turn-helix domain AK38_RS05140 PF00005 ABC transporter AK38_RS05140 PF00664 ABC transporter transmembrane region AK38_RS05155 PF06167 Glucose-regulated metallo-peptidase M90 AK38_RS05165 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AK38_RS05165 PF00356 Bacterial regulatory proteins, lacI family AK38_RS05170 PF01695 IstB-like ATP binding protein AK38_RS05190 PF00872 Transposase, Mutator family AK38_RS05195 PF07883 Cupin domain AK38_RS05200 PF04962 KduI/IolB family AK38_RS05210 PF06917 Periplasmic pectate lyase AK38_RS05215 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS05220 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS05225 PF03459 TOBE domain AK38_RS05225 PF17912 MalK OB fold domain AK38_RS05225 PF00005 ABC transporter AK38_RS05230 PF01547 Bacterial extracellular solute-binding protein AK38_RS05235 PF06178 Oligogalacturonate-specific porin protein (KdgM) AK38_RS05240 PF04307 LexA-binding, inner membrane-associated putative hydrolase AK38_RS05250 PF01510 N-acetylmuramoyl-L-alanine amidase AK38_RS05255 PF09339 IclR helix-turn-helix domain AK38_RS05255 PF01614 Bacterial transcriptional regulator AK38_RS05260 PF14583 Oligogalacturonate lyase AK38_RS05265 PF07690 Major Facilitator Superfamily AK38_RS05270 PF02753 Pili assembly chaperone PapD, C-terminal domain AK38_RS05270 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AK38_RS05280 PF13954 PapC N-terminal domain AK38_RS05280 PF13953 PapC C-terminal domain AK38_RS05280 PF00577 Outer membrane usher protein AK38_RS05285 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AK38_RS05285 PF02753 Pili assembly chaperone PapD, C-terminal domain AK38_RS05290 PF00419 Fimbrial protein AK38_RS05295 PF01435 Peptidase family M48 AK38_RS05300 PF11818 C-terminal domain of tail specific protease (DUF3340) AK38_RS05300 PF17804 Tail specific protease N-terminal domain AK38_RS05300 PF00595 PDZ domain AK38_RS05300 PF03572 Peptidase family S41 AK38_RS05305 PF04352 ProQ/FINO family AK38_RS05305 PF17516 ProQ C-terminal domain AK38_RS05310 PF13185 GAF domain AK38_RS05315 PF04403 Paraquat-inducible protein A AK38_RS05320 PF02470 MlaD protein AK38_RS05340 PF02753 Pili assembly chaperone PapD, C-terminal domain AK38_RS05340 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AK38_RS05355 PF07351 Protein of unknown function (DUF1480) AK38_RS05370 PF01695 IstB-like ATP binding protein AK38_RS05395 PF01168 Alanine racemase, N-terminal domain AK38_RS05395 PF00842 Alanine racemase, C-terminal domain AK38_RS05405 PF05658 Head domain of trimeric autotransporter adhesin AK38_RS05405 PF03895 YadA-like membrane anchor domain AK38_RS05405 PF05662 Coiled stalk of trimeric autotransporter adhesin AK38_RS05405 PF13018 Extended Signal Peptide of Type V secretion system AK38_RS05410 PF13018 Extended Signal Peptide of Type V secretion system AK38_RS05410 PF05658 Head domain of trimeric autotransporter adhesin AK38_RS05410 PF05662 Coiled stalk of trimeric autotransporter adhesin AK38_RS05410 PF03895 YadA-like membrane anchor domain AK38_RS05415 PF01510 N-acetylmuramoyl-L-alanine amidase AK38_RS05425 PF04344 Chemotaxis phosphatase, CheZ AK38_RS05430 PF00072 Response regulator receiver domain AK38_RS05435 PF01339 CheB methylesterase AK38_RS05435 PF00072 Response regulator receiver domain AK38_RS05440 PF01739 CheR methyltransferase, SAM binding domain AK38_RS05440 PF03705 CheR methyltransferase, all-alpha domain AK38_RS05455 PF02203 Tar ligand binding domain homologue AK38_RS05455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AK38_RS05455 PF00672 HAMP domain AK38_RS05470 PF12951 Passenger-associated-transport-repeat AK38_RS05475 PF13309 HTH domain AK38_RS05475 PF08348 YheO-like PAS domain AK38_RS05485 PF01042 Endoribonuclease L-PSP AK38_RS05490 PF07690 Major Facilitator Superfamily AK38_RS05495 PF01584 CheW-like domain AK38_RS05500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AK38_RS05500 PF01627 Hpt domain AK38_RS05500 PF01584 CheW-like domain AK38_RS05500 PF09078 CheY binding AK38_RS05500 PF02895 Signal transducing histidine kinase, homodimeric domain AK38_RS05505 PF13677 Membrane MotB of proton-channel complex MotA/MotB AK38_RS05505 PF00691 OmpA family AK38_RS05510 PF01618 MotA/TolQ/ExbB proton channel family AK38_RS05515 PF05280 Flagellar transcriptional activator (FlhC) AK38_RS05525 PF00690 Cation transporter/ATPase, N-terminus AK38_RS05525 PF00689 Cation transporting ATPase, C-terminus AK38_RS05530 PF02308 MgtC family AK38_RS05550 PF00313 'Cold-shock' DNA-binding domain AK38_RS05555 PF02929 Beta galactosidase small chain AK38_RS05555 PF00703 Glycosyl hydrolases family 2 AK38_RS05555 PF16353 Domain of unknown function(DUF4981) AK38_RS05555 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AK38_RS05555 PF02837 Glycosyl hydrolases family 2, sugar binding domain AK38_RS05560 PF00698 Acyl transferase domain AK38_RS05560 PF08240 Alcohol dehydrogenase GroES-like domain AK38_RS05560 PF00107 Zinc-binding dehydrogenase AK38_RS05560 PF16197 Ketoacyl-synthetase C-terminal extension AK38_RS05560 PF02801 Beta-ketoacyl synthase, C-terminal domain AK38_RS05560 PF08659 KR domain AK38_RS05560 PF00550 Phosphopantetheine attachment site AK38_RS05560 PF00109 Beta-ketoacyl synthase, N-terminal domain AK38_RS05560 PF14765 Polyketide synthase dehydratase AK38_RS05565 PF10777 Inner membrane protein YlaC AK38_RS05570 PF13404 AsnC-type helix-turn-helix domain AK38_RS05570 PF01037 Lrp/AsnC ligand binding domain AK38_RS05580 PF14001 YdfZ protein AK38_RS05585 PF00328 Histidine phosphatase superfamily (branch 2) AK38_RS05595 PF01638 HxlR-like helix-turn-helix AK38_RS05600 PF05368 NmrA-like family AK38_RS05605 PF08447 PAS fold AK38_RS05605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AK38_RS05615 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AK38_RS05615 PF00356 Bacterial regulatory proteins, lacI family AK38_RS05620 PF00180 Isocitrate/isopropylmalate dehydrogenase AK38_RS05625 PF00849 RNA pseudouridylate synthase AK38_RS05630 PF00293 NUDIX domain AK38_RS05640 PF04356 Protein of unknown function (DUF489) AK38_RS05645 PF08328 Adenylosuccinate lyase C-terminal AK38_RS05645 PF00206 Lyase AK38_RS05655 PF00486 Transcriptional regulatory protein, C terminal AK38_RS05655 PF00072 Response regulator receiver domain AK38_RS05660 PF08918 PhoQ Sensor AK38_RS05660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AK38_RS05665 PF08007 Cupin superfamily protein AK38_RS05670 PF01546 Peptidase family M20/M25/M40 AK38_RS05670 PF07687 Peptidase dimerisation domain AK38_RS05675 PF02146 Sir2 family AK38_RS05685 PF02687 FtsX-like permease family AK38_RS05685 PF12704 MacB-like periplasmic core domain AK38_RS05690 PF00005 ABC transporter AK38_RS05695 PF12704 MacB-like periplasmic core domain AK38_RS05695 PF02687 FtsX-like permease family AK38_RS05700 PF17757 UvrB interaction domain AK38_RS05700 PF00270 DEAD/DEAH box helicase AK38_RS05700 PF02559 CarD-like/TRCF domain AK38_RS05700 PF00271 Helicase conserved C-terminal domain AK38_RS05700 PF03461 TRCF domain AK38_RS05705 PF05433 Glycine zipper 2TM domain AK38_RS05710 PF00665 Integrase core domain AK38_RS05710 PF02796 Helix-turn-helix domain of resolvase AK38_RS05715 PF01695 IstB-like ATP binding protein AK38_RS05720 PF00872 Transposase, Mutator family AK38_RS05735 PF07992 Pyridine nucleotide-disulphide oxidoreductase AK38_RS05740 PF05728 Uncharacterised protein family (UPF0227) AK38_RS05745 PF00933 Glycosyl hydrolase family 3 N terminal domain AK38_RS05750 PF01636 Phosphotransferase enzyme family AK38_RS05755 PF13036 Peptidoglycan-synthase activator LpoB AK38_RS05755 PF08139 Prokaryotic membrane lipoprotein lipid attachment site AK38_RS05760 PF07233 Protein of unknown function (DUF1425) AK38_RS05765 PF01230 HIT domain AK38_RS05770 PF08501 Shikimate dehydrogenase substrate binding domain AK38_RS05780 PF00367 phosphotransferase system, EIIB AK38_RS05780 PF02378 Phosphotransferase system, EIIC AK38_RS05785 PF01026 TatD related DNase AK38_RS05790 PF09115 DNA polymerase III, delta subunit, C terminal AK38_RS05795 PF02223 Thymidylate kinase AK38_RS05800 PF02618 YceG-like family AK38_RS05805 PF01063 Amino-transferase class IV AK38_RS05810 PF01797 Transposase IS200 like AK38_RS05815 PF02801 Beta-ketoacyl synthase, C-terminal domain AK38_RS05815 PF00109 Beta-ketoacyl synthase, N-terminal domain AK38_RS05820 PF00550 Phosphopantetheine attachment site AK38_RS05830 PF00698 Acyl transferase domain AK38_RS05835 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AK38_RS05835 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AK38_RS05840 PF02504 Fatty acid synthesis protein AK38_RS05845 PF01783 Ribosomal L32p protein family AK38_RS05850 PF02620 Large ribosomal RNA subunit accumulation protein YceD AK38_RS05855 PF02545 Maf-like protein AK38_RS05870 PF00849 RNA pseudouridylate synthase AK38_RS05870 PF01479 S4 domain AK38_RS05875 PF12111 Polyribonucleotide phosphorylase C terminal AK38_RS05875 PF00575 S1 RNA binding domain AK38_RS05875 PF10150 Ribonuclease E/G family AK38_RS05880 PF00872 Transposase, Mutator family AK38_RS05885 PF03992 Antibiotic biosynthesis monooxygenase AK38_RS05890 PF01979 Amidohydrolase family AK38_RS05895 PF06183 DinI-like family AK38_RS05905 PF13991 BssS protein family AK38_RS05910 PF00872 Transposase, Mutator family AK38_RS05915 PF01306 LacY proton/sugar symporter AK38_RS05920 PF16874 Glycosyl hydrolase family 36 C-terminal domain AK38_RS05920 PF16875 Glycosyl hydrolase family 36 N-terminal domain AK38_RS05930 PF01648 4'-phosphopantetheinyl transferase superfamily AK38_RS05930 PF17837 4'-phosphopantetheinyl transferase N-terminal domain AK38_RS05935 PF03480 Bacterial extracellular solute-binding protein, family 7 AK38_RS05945 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AK38_RS05950 PF00196 Bacterial regulatory proteins, luxR family AK38_RS05950 PF00072 Response regulator receiver domain AK38_RS05960 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) AK38_RS05970 PF01522 Polysaccharide deacetylase AK38_RS05980 PF01554 MatE AK38_RS05985 PF00764 Arginosuccinate synthase AK38_RS05990 PF01070 FMN-dependent dehydrogenase AK38_RS05995 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AK38_RS05995 PF13378 Enolase C-terminal domain-like AK38_RS06000 PF01557 Fumarylacetoacetate (FAA) hydrolase family AK38_RS06010 PF04134 Protein of unknown function, DUF393 AK38_RS06015 PF07690 Major Facilitator Superfamily AK38_RS06020 PF11924 Inverse autotransporter, beta-domain AK38_RS06020 PF09134 Invasin, domain 3 AK38_RS06020 PF02369 Bacterial Ig-like domain (group 1) AK38_RS06025 PF00872 Transposase, Mutator family AK38_RS06030 PF04363 Protein of unknown function (DUF496) AK38_RS06040 PF08411 Exonuclease C-terminal AK38_RS06040 PF00929 Exonuclease AK38_RS06045 PF13520 Amino acid permease AK38_RS06055 PF00465 Iron-containing alcohol dehydrogenase AK38_RS06060 PF00005 ABC transporter AK38_RS06065 PF00005 ABC transporter AK38_RS06070 PF02653 Branched-chain amino acid transport system / permease component AK38_RS06075 PF01370 NAD dependent epimerase/dehydratase family AK38_RS06080 PF01634 ATP phosphoribosyltransferase AK38_RS06080 PF08029 HisG, C-terminal domain AK38_RS06085 PF00815 Histidinol dehydrogenase AK38_RS06090 PF00155 Aminotransferase class I and II AK38_RS06095 PF00475 Imidazoleglycerol-phosphate dehydratase AK38_RS06100 PF00117 Glutamine amidotransferase class-I AK38_RS06105 PF00977 Histidine biosynthesis protein AK38_RS06110 PF00977 Histidine biosynthesis protein AK38_RS06115 PF01502 Phosphoribosyl-AMP cyclohydrolase AK38_RS06115 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AK38_RS06120 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AK38_RS06120 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AK38_RS06125 PF00483 Nucleotidyl transferase AK38_RS06130 PF00483 Nucleotidyl transferase AK38_RS06135 PF04183 IucA / IucC family AK38_RS06135 PF06276 Ferric iron reductase FhuF-like transporter AK38_RS06140 PF07715 TonB-dependent Receptor Plug Domain AK38_RS06140 PF07660 Secretin and TonB N terminus short domain AK38_RS06140 PF00593 TonB dependent receptor AK38_RS06145 PF01497 Periplasmic binding protein AK38_RS06150 PF01032 FecCD transport family AK38_RS06155 PF01032 FecCD transport family AK38_RS06160 PF00005 ABC transporter AK38_RS06165 PF04183 IucA / IucC family AK38_RS06165 PF06276 Ferric iron reductase FhuF-like transporter AK38_RS06175 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AK38_RS06180 PF00282 Pyridoxal-dependent decarboxylase conserved domain AK38_RS06185 PF06276 Ferric iron reductase FhuF-like transporter AK38_RS06185 PF11575 FhuF 2Fe-2S C-terminal domain AK38_RS06190 PF03471 Transporter associated domain AK38_RS06190 PF03741 Integral membrane protein TerC family AK38_RS06190 PF00571 CBS domain AK38_RS06195 PF05170 AsmA family AK38_RS06200 PF00692 dUTPase AK38_RS06205 PF00485 Phosphoribulokinase / Uridine kinase family AK38_RS06210 PF10609 NUBPL iron-transfer P-loop NTPase AK38_RS06215 PF09334 tRNA synthetases class I (M) AK38_RS06215 PF01588 Putative tRNA binding domain AK38_RS06220 PF01797 Transposase IS200 like AK38_RS06225 PF00665 Integrase core domain AK38_RS06225 PF02796 Helix-turn-helix domain of resolvase AK38_RS06230 PF01695 IstB-like ATP binding protein AK38_RS06255 PF07690 Major Facilitator Superfamily AK38_RS06260 PF03788 LrgA family AK38_RS06265 PF04172 LrgB-like family AK38_RS06270 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AK38_RS06270 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region AK38_RS06275 PF03949 Malic enzyme, NAD binding domain AK38_RS06275 PF00390 Malic enzyme, N-terminal domain AK38_RS06280 PF02698 DUF218 domain AK38_RS06285 PF02653 Branched-chain amino acid transport system / permease component AK38_RS06290 PF00005 ABC transporter AK38_RS06295 PF13407 Periplasmic binding protein domain AK38_RS06300 PF04235 Protein of unknown function (DUF418) AK38_RS06305 PF01227 GTP cyclohydrolase I AK38_RS06310 PF06779 Uncharacterised MFS-type transporter YbfB AK38_RS06315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AK38_RS06315 PF03466 LysR substrate binding domain AK38_RS06320 PF00107 Zinc-binding dehydrogenase AK38_RS06320 PF08240 Alcohol dehydrogenase GroES-like domain AK38_RS06325 PF00756 Putative esterase AK38_RS06340 PF13533 Biotin-lipoyl like AK38_RS06345 PF00005 ABC transporter AK38_RS06355 PF03453 MoeA N-terminal region (domain I and II) AK38_RS06355 PF00994 Probable molybdopterin binding domain AK38_RS06355 PF03454 MoeA C-terminal region (domain IV) AK38_RS06360 PF00899 ThiF family AK38_RS06365 PF00872 Transposase, Mutator family AK38_RS06375 PF12848 ABC transporter AK38_RS06375 PF00005 ABC transporter AK38_RS06470 PF10431 C-terminal, D2-small domain, of ClpB protein AK38_RS06470 PF00004 ATPase family associated with various cellular activities (AAA) AK38_RS06470 PF17871 AAA lid domain AK38_RS06470 PF07724 AAA domain (Cdc48 subfamily) AK38_RS06480 PF00691 OmpA family AK38_RS06480 PF05736 OprF membrane domain AK38_RS06510 PF00698 Acyl transferase domain AK38_RS06515 PF00550 Phosphopantetheine attachment site AK38_RS06530 PF00378 Enoyl-CoA hydratase/isomerase AK38_RS06540 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal AK38_RS06540 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal AK38_RS06550 PF02801 Beta-ketoacyl synthase, C-terminal domain AK38_RS06550 PF00109 Beta-ketoacyl synthase, N-terminal domain AK38_RS06555 PF07977 FabA-like domain AK38_RS06570 PF08031 Berberine and berberine like AK38_RS06570 PF01565 FAD binding domain AK38_RS06600 PF04358 DsrC like protein AK38_RS06605 PF00708 Acylphosphatase AK38_RS06610 PF10672 S-adenosylmethionine-dependent methyltransferase AK38_RS06610 PF17785 PUA-like domain AK38_RS06615 PF08755 Hemimethylated DNA-binding protein YccV like AK38_RS06620 PF13380 CoA binding domain AK38_RS06625 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) AK38_RS06630 PF02142 MGS-like domain AK38_RS06635 PF00580 UvrD/REP helicase N-terminal domain AK38_RS06635 PF12462 DNA helicase IV / RNA helicase N terminal AK38_RS06635 PF13361 UvrD-like helicase C-terminal domain AK38_RS06640 PF03733 Inner membrane component domain AK38_RS06645 PF12805 FUSC-like inner membrane protein yccS AK38_RS06650 PF04993 TfoX N-terminal domain AK38_RS06650 PF04994 TfoX C-terminal domain AK38_RS06655 PF03846 Cell division inhibitor SulA AK38_RS06660 PF01389 OmpA-like transmembrane domain AK38_RS06660 PF00691 OmpA family AK38_RS06670 PF01797 Transposase IS200 like AK38_RS06675 PF06303 MatP N-terminal domain AK38_RS06675 PF17414 MatP C-terminal ribbon-helix-helix domain AK38_RS06680 PF05362 Lon protease (S16) C-terminal proteolytic domain AK38_RS06680 PF13654 AAA domain AK38_RS06685 PF07977 FabA-like domain AK38_RS06700 PF00665 Integrase core domain AK38_RS06700 PF02796 Helix-turn-helix domain of resolvase AK38_RS06720 PF01797 Transposase IS200 like AK38_RS06730 PF04957 Ribosome modulation factor AK38_RS06740 PF03886 ABC-type transport auxiliary lipoprotein component AK38_RS06745 PF02470 MlaD protein AK38_RS06750 PF04403 Paraquat-inducible protein A AK38_RS06755 PF00005 ABC transporter AK38_RS06755 PF12848 ABC transporter AK38_RS06755 PF16326 ABC transporter C-terminal domain AK38_RS06760 PF01170 Putative RNA methylase family UPF0020 AK38_RS06760 PF10672 S-adenosylmethionine-dependent methyltransferase AK38_RS06760 PF02926 THUMP domain AK38_RS06765 PF03473 MOSC domain AK38_RS06765 PF03476 MOSC N-terminal beta barrel domain AK38_RS06765 PF00111 2Fe-2S iron-sulfur cluster binding domain AK38_RS06770 PF07126 Cell-division protein ZapC AK38_RS06775 PF01180 Dihydroorotate dehydrogenase AK38_RS06780 PF01433 Peptidase family M1 domain AK38_RS06780 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AK38_RS06780 PF11940 Domain of unknown function (DUF3458) Ig-like fold AK38_RS06785 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AK38_RS06785 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AK38_RS06790 PF01336 OB-fold nucleic acid binding domain AK38_RS06790 PF00152 tRNA synthetases class II (D, K and N) AK38_RS06795 PF00267 Gram-negative porin AK38_RS06800 PF00155 Aminotransferase class I and II AK38_RS06805 PF00753 Metallo-beta-lactamase superfamily AK38_RS06810 PF05951 Bacterial protein of unknown function (DUF882) AK38_RS06815 PF01471 Putative peptidoglycan binding domain AK38_RS06815 PF03734 L,D-transpeptidase catalytic domain AK38_RS06830 PF04310 MukB N-terminal AK38_RS06830 PF16330 MukB hinge domain AK38_RS06835 PF04288 MukE-like family AK38_RS06840 PF17192 MukF middle domain AK38_RS06840 PF17193 MukF C-terminal domain AK38_RS06840 PF03882 MukF winged-helix domain AK38_RS06845 PF13847 Methyltransferase domain AK38_RS06855 PF01636 Phosphotransferase enzyme family AK38_RS06865 PF02348 Cytidylyltransferase AK38_RS06870 PF03966 Trm112p-like protein AK38_RS06875 PF00313 'Cold-shock' DNA-binding domain AK38_RS06885 PF07063 Domain of unknown function (DUF1338) AK38_RS06890 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AK38_RS06895 PF00005 ABC transporter AK38_RS06895 PF00664 ABC transporter transmembrane region AK38_RS06900 PF03772 Competence protein AK38_RS06900 PF00753 Metallo-beta-lactamase superfamily AK38_RS06910 PF00216 Bacterial DNA-binding protein AK38_RS06915 PF00575 S1 RNA binding domain AK38_RS06920 PF02224 Cytidylate kinase AK38_RS06925 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AK38_RS06930 PF00266 Aminotransferase class-V AK38_RS06940 PF03895 YadA-like membrane anchor domain AK38_RS06940 PF05662 Coiled stalk of trimeric autotransporter adhesin AK38_RS06940 PF05658 Head domain of trimeric autotransporter adhesin AK38_RS06940 PF05662 Coiled stalk of trimeric autotransporter adhesin AK38_RS06940 PF13018 Extended Signal Peptide of Type V secretion system AK38_RS06940 PF05658 Head domain of trimeric autotransporter adhesin AK38_RS06940 PF03895 YadA-like membrane anchor domain AK38_RS06940 PF13018 Extended Signal Peptide of Type V secretion system AK38_RS06945 PF00710 Asparaginase, N-terminal AK38_RS06945 PF17763 Glutaminase/Asparaginase C-terminal domain AK38_RS06950 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding AK38_RS06950 PF18381 YcaO cyclodehydratase C-terminal domain AK38_RS06955 PF01226 Formate/nitrite transporter AK38_RS06960 PF01228 Glycine radical AK38_RS06960 PF02901 Pyruvate formate lyase-like AK38_RS06970 PF04055 Radical SAM superfamily AK38_RS06975 PF07690 Major Facilitator Superfamily AK38_RS06980 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AK38_RS06980 PF02403 Seryl-tRNA synthetase N-terminal domain AK38_RS06985 PF16193 AAA C-terminal domain AK38_RS06985 PF12002 MgsA AAA+ ATPase C terminal AK38_RS06985 PF00004 ATPase family associated with various cellular activities (AAA) AK38_RS06990 PF03548 Outer membrane lipoprotein carrier protein LolA AK38_RS06995 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AK38_RS06995 PF01580 FtsK/SpoIIIE family AK38_RS06995 PF17854 FtsK alpha domain AK38_RS06995 PF09397 Ftsk gamma domain AK38_RS07000 PF01037 Lrp/AsnC ligand binding domain AK38_RS07005 PF07992 Pyridine nucleotide-disulphide oxidoreductase AK38_RS07015 PF00005 ABC transporter AK38_RS07015 PF00664 ABC transporter transmembrane region AK38_RS07020 PF00005 ABC transporter AK38_RS07020 PF00664 ABC transporter transmembrane region AK38_RS07025 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AK38_RS07030 PF01176 Translation initiation factor 1A / IF-1 AK38_RS07040 PF17871 AAA lid domain AK38_RS07040 PF07724 AAA domain (Cdc48 subfamily) AK38_RS07040 PF02861 Clp amino terminal domain, pathogenicity island component AK38_RS07040 PF00004 ATPase family associated with various cellular activities (AAA) AK38_RS07040 PF10431 C-terminal, D2-small domain, of ClpB protein AK38_RS07045 PF02617 ATP-dependent Clp protease adaptor protein ClpS AK38_RS07050 PF00313 'Cold-shock' DNA-binding domain AK38_RS07055 PF02687 FtsX-like permease family AK38_RS07055 PF00005 ABC transporter AK38_RS07055 PF12704 MacB-like periplasmic core domain AK38_RS07060 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AK38_RS07065 PF04393 Protein of unknown function (DUF535) AK38_RS07070 PF11398 Protein of unknown function (DUF2813) AK38_RS07075 PF03956 Lysine exporter LysO AK38_RS07080 PF03063 Prismane/CO dehydrogenase family AK38_RS07085 PF00175 Oxidoreductase NAD-binding domain AK38_RS07085 PF00111 2Fe-2S iron-sulfur cluster binding domain AK38_RS07085 PF00970 Oxidoreductase FAD-binding domain AK38_RS07090 PF00205 Thiamine pyrophosphate enzyme, central domain AK38_RS07090 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AK38_RS07090 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AK38_RS07095 PF01212 Beta-eliminating lyase AK38_RS07100 PF13460 NAD(P)H-binding AK38_RS07100 PF11066 Protein of unknown function (DUF2867) AK38_RS07105 PF01370 NAD dependent epimerase/dehydratase family AK38_RS07110 PF12883 Protein of unknown function (DUF3828) AK38_RS07115 PF01817 Chorismate mutase type II AK38_RS07120 PF00005 ABC transporter AK38_RS07125 PF00497 Bacterial extracellular solute-binding proteins, family 3 AK38_RS07130 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS07135 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS07140 PF00892 EamA-like transporter family AK38_RS07145 PF10100 Staphylopine dehydrogenase AK38_RS07150 PF03059 Nicotianamine synthase protein AK38_RS07155 PF00005 ABC transporter AK38_RS07190 PF01695 IstB-like ATP binding protein AK38_RS07195 PF00665 Integrase core domain AK38_RS07195 PF02796 Helix-turn-helix domain of resolvase AK38_RS07205 PF05958 tRNA (Uracil-5-)-methyltransferase AK38_RS07210 PF10767 Protein of unknown function (DUF2593) AK38_RS07215 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS07220 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS07225 PF08402 TOBE domain AK38_RS07225 PF00005 ABC transporter AK38_RS07230 PF13416 Bacterial extracellular solute-binding protein AK38_RS07235 PF10722 Putative bacterial sensory transduction regulator AK38_RS07245 PF07214 Protein of unknown function (DUF1418) AK38_RS07250 PF00462 Glutaredoxin AK38_RS07255 PF06826 Predicted Permease Membrane Region AK38_RS07255 PF02080 TrkA-C domain AK38_RS07265 PF01569 PAP2 superfamily AK38_RS07270 PF01791 DeoC/LacD family aldolase AK38_RS07275 PF08220 DeoR-like helix-turn-helix domain AK38_RS07275 PF00455 DeoR C terminal sensor domain AK38_RS07290 PF07943 Penicillin-binding protein 5, C-terminal domain AK38_RS07290 PF00768 D-alanyl-D-alanine carboxypeptidase AK38_RS07295 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS07300 PF09383 NIL domain AK38_RS07300 PF00005 ABC transporter AK38_RS07305 PF03180 NLPA lipoprotein AK38_RS07320 PF00043 Glutathione S-transferase, C-terminal domain AK38_RS07320 PF13417 Glutathione S-transferase, N-terminal domain AK38_RS07325 PF07715 TonB-dependent Receptor Plug Domain AK38_RS07325 PF00593 TonB dependent receptor AK38_RS07330 PF00005 ABC transporter AK38_RS07335 PF01032 FecCD transport family AK38_RS07345 PF00324 Amino acid permease AK38_RS07350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AK38_RS07350 PF03466 LysR substrate binding domain AK38_RS07355 PF03601 Conserved hypothetical protein 698 AK38_RS07360 PF01261 Xylose isomerase-like TIM barrel AK38_RS07365 PF13953 PapC C-terminal domain AK38_RS07365 PF00577 Outer membrane usher protein AK38_RS07365 PF13954 PapC N-terminal domain AK38_RS07370 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AK38_RS07370 PF02753 Pili assembly chaperone PapD, C-terminal domain AK38_RS07380 PF17550 Family of unknown function AK38_RS07385 PF00486 Transcriptional regulatory protein, C terminal AK38_RS07390 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AK38_RS07390 PF02378 Phosphotransferase system, EIIC AK38_RS07395 PF00294 pfkB family carbohydrate kinase AK38_RS07400 PF00381 PTS HPr component phosphorylation site AK38_RS07400 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AK38_RS07405 PF00293 NUDIX domain AK38_RS07410 PF02653 Branched-chain amino acid transport system / permease component AK38_RS07415 PF00005 ABC transporter AK38_RS07425 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AK38_RS07430 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AK38_RS07430 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AK38_RS07435 PF00171 Aldehyde dehydrogenase family AK38_RS07445 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AK38_RS07445 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AK38_RS07445 PF01842 ACT domain AK38_RS07455 PF03692 Putative zinc- or iron-chelating domain AK38_RS07460 PF03222 Tryptophan/tyrosine permease family AK38_RS07465 PF01132 Elongation factor P (EF-P) OB domain AK38_RS07465 PF08207 Elongation factor P (EF-P) KOW-like domain AK38_RS07465 PF09285 Elongation factor P, C-terminal AK38_RS07470 PF03786 D-mannonate dehydratase (UxuA) AK38_RS07475 PF08125 Mannitol dehydrogenase C-terminal domain AK38_RS07475 PF01232 Mannitol dehydrogenase Rossmann domain AK38_RS07480 PF07729 FCD domain AK38_RS07480 PF00392 Bacterial regulatory proteins, gntR family AK38_RS07490 PF07683 Cobalamin synthesis protein cobW C-terminal domain AK38_RS07490 PF02492 CobW/HypB/UreG, nucleotide-binding domain AK38_RS07495 PF01569 PAP2 superfamily AK38_RS07500 PF00877 NlpC/P60 family AK38_RS07505 PF00563 EAL domain AK38_RS07505 PF12792 CSS motif domain associated with EAL AK38_RS07510 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AK38_RS07515 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS07520 PF12911 N-terminal TM domain of oligopeptide transport permease C AK38_RS07520 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS07525 PF00005 ABC transporter AK38_RS07525 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AK38_RS07530 PF13989 YejG-like protein AK38_RS07535 PF07690 Major Facilitator Superfamily AK38_RS07540 PF00849 RNA pseudouridylate synthase AK38_RS07540 PF01479 S4 domain AK38_RS07545 PF04851 Type III restriction enzyme, res subunit AK38_RS07545 PF00271 Helicase conserved C-terminal domain AK38_RS07550 PF01386 Ribosomal L25p family AK38_RS07555 PF01797 Transposase IS200 like AK38_RS07565 PF04245 37-kD nucleoid-associated bacterial protein AK38_RS07570 PF07208 Protein of unknown function (DUF1414) AK38_RS07575 PF11893 Domain of unknown function (DUF3413) AK38_RS07575 PF00884 Sulfatase AK38_RS07605 PF00232 Glycosyl hydrolase family 1 AK38_RS07610 PF01380 SIS domain AK38_RS07610 PF01418 Helix-turn-helix domain, rpiR family AK38_RS07615 PF07484 Phage Tail Collar Domain AK38_RS07630 PF04865 Baseplate J-like protein AK38_RS07670 PF04984 Phage tail sheath protein subtilisin-like domain AK38_RS07670 PF17482 Phage tail sheath C-terminal domain AK38_RS07690 PF01261 Xylose isomerase-like TIM barrel AK38_RS07695 PF00455 DeoR C terminal sensor domain AK38_RS07695 PF08220 DeoR-like helix-turn-helix domain AK38_RS07705 PF07005 Sugar-binding N-terminal domain AK38_RS07705 PF17042 Nucleotide-binding C-terminal domain AK38_RS07710 PF06530 Phage antitermination protein Q AK38_RS07715 PF01381 Helix-turn-helix AK38_RS07715 PF00717 Peptidase S24-like AK38_RS07720 PF06183 DinI-like family AK38_RS07725 PF01278 Omptin family AK38_RS07730 PF00672 HAMP domain AK38_RS07730 PF02743 Cache domain AK38_RS07730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AK38_RS07735 PF12706 Beta-lactamase superfamily domain AK38_RS07750 PF00144 Beta-lactamase AK38_RS07775 PF01797 Transposase IS200 like AK38_RS07780 PF00267 Gram-negative porin AK38_RS07785 PF07690 Major Facilitator Superfamily AK38_RS07790 PF16359 RcsD-ABL domain AK38_RS07790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AK38_RS07790 PF01627 Hpt domain AK38_RS07795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AK38_RS07795 PF01627 Hpt domain AK38_RS07795 PF16359 RcsD-ABL domain AK38_RS07800 PF00196 Bacterial regulatory proteins, luxR family AK38_RS07800 PF00072 Response regulator receiver domain AK38_RS07805 PF00512 His Kinase A (phospho-acceptor) domain AK38_RS07805 PF00072 Response regulator receiver domain AK38_RS07805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AK38_RS07805 PF09456 RcsC Alpha-Beta-Loop (ABL) AK38_RS07815 PF00521 DNA gyrase/topoisomerase IV, subunit A AK38_RS07815 PF03989 DNA gyrase C-terminal domain, beta-propeller AK38_RS07825 PF02867 Ribonucleotide reductase, barrel domain AK38_RS07825 PF03477 ATP cone domain AK38_RS07825 PF00317 Ribonucleotide reductase, all-alpha domain AK38_RS07830 PF00268 Ribonucleotide reductase, small chain AK38_RS07835 PF00111 2Fe-2S iron-sulfur cluster binding domain AK38_RS07840 PF03974 Ecotin AK38_RS07845 PF00994 Probable molybdopterin binding domain AK38_RS07850 PF03222 Tryptophan/tyrosine permease family AK38_RS07855 PF07437 YfaZ precursor AK38_RS07860 PF06628 Catalase-related immune-responsive AK38_RS07860 PF00199 Catalase AK38_RS07865 PF13307 Helicase C-terminal domain AK38_RS07865 PF06733 DEAD_2 AK38_RS07870 PF00267 Gram-negative porin AK38_RS07875 PF00892 EamA-like transporter family AK38_RS07885 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AK38_RS07885 PF01276 Orn/Lys/Arg decarboxylase, major domain AK38_RS07885 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AK38_RS07890 PF13520 Amino acid permease AK38_RS07895 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS07900 PF00005 ABC transporter AK38_RS07905 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS07920 PF00581 Rhodanese-like domain AK38_RS07935 PF00005 ABC transporter AK38_RS07940 PF00005 ABC transporter AK38_RS07945 PF02653 Branched-chain amino acid transport system / permease component AK38_RS07950 PF02653 Branched-chain amino acid transport system / permease component AK38_RS07955 PF00158 Sigma-54 interaction domain AK38_RS07955 PF13188 PAS domain AK38_RS07955 PF02954 Bacterial regulatory protein, Fis family AK38_RS07960 PF07308 Protein of unknown function (DUF1456) AK38_RS07965 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS07970 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS07980 PF00005 ABC transporter AK38_RS07985 PF04226 Transglycosylase associated protein AK38_RS07995 PF01844 HNH endonuclease AK38_RS08000 PF01928 CYTH domain AK38_RS08005 PF09330 D-lactate dehydrogenase, membrane binding AK38_RS08005 PF01565 FAD binding domain AK38_RS08010 PF00768 D-alanyl-D-alanine carboxypeptidase AK38_RS08020 PF01207 Dihydrouridine synthase (Dus) AK38_RS08030 PF01797 Transposase IS200 like AK38_RS08040 PF01048 Phosphorylase superfamily AK38_RS08050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AK38_RS08050 PF03466 LysR substrate binding domain AK38_RS08055 PF02028 BCCT, betaine/carnitine/choline family transporter AK38_RS08060 PF13977 BetI-type transcriptional repressor, C-terminal AK38_RS08060 PF00440 Bacterial regulatory proteins, tetR family AK38_RS08065 PF00171 Aldehyde dehydrogenase family AK38_RS08070 PF00732 GMC oxidoreductase AK38_RS08070 PF05199 GMC oxidoreductase AK38_RS08075 PF01797 Transposase IS200 like AK38_RS08085 PF01027 Inhibitor of apoptosis-promoting Bax1 AK38_RS08090 PF02391 MoaE protein AK38_RS08095 PF02597 ThiS family AK38_RS08100 PF01967 MoaC family AK38_RS08105 PF04055 Radical SAM superfamily AK38_RS08105 PF06463 Molybdenum Cofactor Synthesis C AK38_RS08115 PF01933 Uncharacterised protein family UPF0052 AK38_RS08120 PF09905 DNA-binding protein VF530 AK38_RS08125 PF00271 Helicase conserved C-terminal domain AK38_RS08125 PF12344 Ultra-violet resistance protein B AK38_RS08125 PF17757 UvrB interaction domain AK38_RS08125 PF02151 UvrB/uvrC motif AK38_RS08125 PF04851 Type III restriction enzyme, res subunit AK38_RS08130 PF00005 ABC transporter AK38_RS08130 PF09383 NIL domain AK38_RS08140 PF08241 Methyltransferase domain AK38_RS08145 PF00155 Aminotransferase class I and II AK38_RS08150 PF06968 Biotin and Thiamin Synthesis associated domain AK38_RS08150 PF04055 Radical SAM superfamily AK38_RS08155 PF00202 Aminotransferase class-III AK38_RS08160 PF10282 Lactonase, 7-bladed beta-propeller AK38_RS08170 PF00005 ABC transporter AK38_RS08170 PF03459 TOBE domain AK38_RS08175 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS08185 PF10766 Multidrug efflux pump-associated protein AcrZ AK38_RS08190 PF03459 TOBE domain AK38_RS08190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AK38_RS08195 PF00005 ABC transporter AK38_RS08210 PF16363 GDP-mannose 4,6 dehydratase AK38_RS08215 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain AK38_RS08215 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain AK38_RS08220 PF10509 Galactokinase galactose-binding signature AK38_RS08220 PF00288 GHMP kinases N terminal domain AK38_RS08220 PF08544 GHMP kinases C terminal AK38_RS08230 PF01263 Aldose 1-epimerase AK38_RS08240 PF00300 Histidine phosphatase superfamily (branch 1) AK38_RS08245 PF00793 DAHP synthetase I family AK38_RS08250 PF00665 Integrase core domain AK38_RS08250 PF02796 Helix-turn-helix domain of resolvase AK38_RS08255 PF01695 IstB-like ATP binding protein AK38_RS08260 PF00793 DAHP synthetase I family AK38_RS08265 PF01545 Cation efflux family AK38_RS08270 PF04973 Nicotinamide mononucleotide transporter AK38_RS08275 PF02445 Quinolinate synthetase A protein AK38_RS08295 PF16331 TolA binding protein trimerisation AK38_RS08295 PF13174 Tetratricopeptide repeat AK38_RS08300 PF00691 OmpA family AK38_RS08305 PF07676 WD40-like Beta Propeller Repeat AK38_RS08305 PF04052 TolB amino-terminal domain AK38_RS08310 PF06519 TolA C-terminal AK38_RS08310 PF06519 TolA C-terminal AK38_RS08315 PF02472 Biopolymer transport protein ExbD/TolR AK38_RS08320 PF01618 MotA/TolQ/ExbB proton channel family AK38_RS08325 PF03061 Thioesterase superfamily AK38_RS08330 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) AK38_RS08335 PF08173 Membrane bound YbgT-like protein AK38_RS08340 PF02322 Cytochrome bd terminal oxidase subunit II AK38_RS08345 PF01654 Cytochrome bd terminal oxidase subunit I AK38_RS08350 PF00549 CoA-ligase AK38_RS08350 PF02629 CoA binding domain AK38_RS08355 PF00549 CoA-ligase AK38_RS08355 PF08442 ATP-grasp domain AK38_RS08360 PF02817 e3 binding domain AK38_RS08360 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AK38_RS08360 PF00364 Biotin-requiring enzyme AK38_RS08365 PF00676 Dehydrogenase E1 component AK38_RS08365 PF16078 2-oxoglutarate dehydrogenase N-terminus AK38_RS08365 PF02779 Transketolase, pyrimidine binding domain AK38_RS08365 PF16870 2-oxoglutarate dehydrogenase C-terminal AK38_RS08370 PF13085 2Fe-2S iron-sulfur cluster binding domain AK38_RS08375 PF02910 Fumarate reductase flavoprotein C-term AK38_RS08375 PF00890 FAD binding domain AK38_RS08380 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AK38_RS08385 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AK38_RS08390 PF00285 Citrate synthase, C-terminal domain AK38_RS08395 PF01025 GrpE AK38_RS08400 PF01513 ATP-NAD kinase AK38_RS08405 PF02463 RecF/RecN/SMC N terminal domain AK38_RS08410 PF04355 SmpA / OmlA family AK38_RS08415 PF03658 RnfH family Ubiquitin AK38_RS08420 PF03364 Polyketide cyclase / dehydrase and lipid transport AK38_RS08425 PF01668 SmpB protein AK38_RS08440 PF01797 Transposase IS200 like AK38_RS08445 PF13356 Arm DNA-binding domain AK38_RS08445 PF00589 Phage integrase family AK38_RS08505 PF05973 Phage derived protein Gp49-like (DUF891) AK38_RS08540 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AK38_RS08550 PF00929 Exonuclease AK38_RS08555 PF00075 RNase H AK38_RS08560 PF08241 Methyltransferase domain AK38_RS08565 PF00753 Metallo-beta-lactamase superfamily AK38_RS08565 PF16123 Hydroxyacylglutathione hydrolase C-terminus AK38_RS08570 PF01464 Transglycosylase SLT domain AK38_RS08570 PF01476 LysM domain AK38_RS08575 PF03372 Endonuclease/Exonuclease/phosphatase family AK38_RS08585 PF00248 Aldo/keto reductase family AK38_RS08620 PF09383 NIL domain AK38_RS08620 PF00005 ABC transporter AK38_RS08625 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS08630 PF03180 NLPA lipoprotein AK38_RS08635 PF16358 RcsF lipoprotein AK38_RS08640 PF18389 TrmO C-terminal domain AK38_RS08640 PF01980 tRNA-methyltransferase O AK38_RS08645 PF04073 Aminoacyl-tRNA editing domain AK38_RS08645 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AK38_RS08645 PF03129 Anticodon binding domain AK38_RS08650 PF04170 NlpE N-terminal domain AK38_RS08650 PF17185 NlpE C-terminal OB domain AK38_RS08655 PF00472 RF-1 domain AK38_RS08660 PF07152 YaeQ protein AK38_RS08665 PF06786 Uncharacterised protein family (UPF0253) AK38_RS08670 PF07073 Modulator of Rho-dependent transcription termination (ROF) AK38_RS08675 PF00034 Cytochrome c AK38_RS08680 PF09179 TilS substrate binding domain AK38_RS08680 PF01171 PP-loop family AK38_RS08680 PF11734 TilS substrate C-terminal domain AK38_RS08685 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AK38_RS08690 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AK38_RS08695 PF14579 Helix-hairpin-helix motif AK38_RS08695 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AK38_RS08695 PF07733 Bacterial DNA polymerase III alpha NTPase domain AK38_RS08695 PF02811 PHP domain AK38_RS08695 PF01336 OB-fold nucleic acid binding domain AK38_RS08700 PF01351 Ribonuclease HII AK38_RS08705 PF02684 Lipid-A-disaccharide synthetase AK38_RS08710 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AK38_RS08710 PF00132 Bacterial transferase hexapeptide (six repeats) AK38_RS08715 PF07977 FabA-like domain AK38_RS08720 PF00132 Bacterial transferase hexapeptide (six repeats) AK38_RS08720 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AK38_RS08725 PF03938 Outer membrane protein (OmpH-like) AK38_RS08730 PF07244 Surface antigen variable number repeat AK38_RS08730 PF01103 Surface antigen AK38_RS08735 PF02163 Peptidase family M50 AK38_RS08735 PF17820 PDZ domain AK38_RS08745 PF01255 Putative undecaprenyl diphosphate synthase AK38_RS08750 PF13288 DXP reductoisomerase C-terminal domain AK38_RS08750 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AK38_RS08750 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AK38_RS08755 PF01765 Ribosome recycling factor AK38_RS08760 PF00696 Amino acid kinase family AK38_RS08765 PF00889 Elongation factor TS AK38_RS08770 PF00318 Ribosomal protein S2 AK38_RS08775 PF00557 Metallopeptidase family M24 AK38_RS08780 PF01966 HD domain AK38_RS08780 PF01842 ACT domain AK38_RS08780 PF08335 GlnD PII-uridylyltransferase AK38_RS08780 PF01909 Nucleotidyltransferase domain AK38_RS08785 PF14602 Hexapeptide repeat of succinyl-transferase AK38_RS08785 PF00132 Bacterial transferase hexapeptide (six repeats) AK38_RS08785 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AK38_RS08790 PF11944 Protein of unknown function (DUF3461) AK38_RS08795 PF00258 Flavodoxin AK38_RS08800 PF00849 RNA pseudouridylate synthase AK38_RS08805 PF04287 tRNA pseudouridine synthase C AK38_RS08810 PF01797 Transposase IS200 like AK38_RS08815 PF07348 Syd protein (SUKH-2) AK38_RS08820 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AK38_RS08820 PF14489 QueF-like protein AK38_RS08825 PF11892 Domain of unknown function (DUF3412) AK38_RS08825 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases AK38_RS08825 PF03641 Possible lysine decarboxylase AK38_RS08830 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AK38_RS08830 PF01367 5'-3' exonuclease, C-terminal SAM fold AK38_RS08835 PF01728 FtsJ-like methyltransferase AK38_RS08835 PF18125 RlmM ferredoxin-like domain AK38_RS08840 PF04241 Protein of unknown function (DUF423) AK38_RS08845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AK38_RS08845 PF03466 LysR substrate binding domain AK38_RS08850 PF00266 Aminotransferase class-V AK38_RS08855 PF02657 Fe-S metabolism associated domain AK38_RS08860 PF00899 ThiF family AK38_RS08865 PF06725 3D domain AK38_RS08865 PF03562 MltA specific insert domain AK38_RS08880 PF11741 AMIN domain AK38_RS08880 PF01520 N-acetylmuramoyl-L-alanine amidase AK38_RS08885 PF00583 Acetyltransferase (GNAT) family AK38_RS08885 PF00696 Amino acid kinase family AK38_RS08890 PF13538 UvrD-like helicase C-terminal domain AK38_RS08895 PF13361 UvrD-like helicase C-terminal domain AK38_RS08895 PF00580 UvrD/REP helicase N-terminal domain AK38_RS08895 PF12705 PD-(D/E)XK nuclease superfamily AK38_RS08900 PF00675 Insulinase (Peptidase family M16) AK38_RS08900 PF05193 Peptidase M16 inactive domain AK38_RS08900 PF16187 Middle or third domain of peptidase_M16 AK38_RS08905 PF17946 RecC C-terminal domain AK38_RS08925 PF01695 IstB-like ATP binding protein AK38_RS08930 PF02796 Helix-turn-helix domain of resolvase AK38_RS08930 PF00665 Integrase core domain AK38_RS08940 PF07715 TonB-dependent Receptor Plug Domain AK38_RS08940 PF00593 TonB dependent receptor AK38_RS08945 PF07687 Peptidase dimerisation domain AK38_RS08945 PF01546 Peptidase family M20/M25/M40 AK38_RS08950 PF03806 AbgT putative transporter family AK38_RS08955 PF14496 C-terminal novel E3 ligase, LRR-interacting AK38_RS08955 PF12468 Type III secretion system leucine rich repeat protein AK38_RS08960 PF14496 C-terminal novel E3 ligase, LRR-interacting AK38_RS08960 PF12468 Type III secretion system leucine rich repeat protein AK38_RS08960 PF12468 Type III secretion system leucine rich repeat protein AK38_RS08960 PF14496 C-terminal novel E3 ligase, LRR-interacting AK38_RS08965 PF12468 Type III secretion system leucine rich repeat protein AK38_RS08965 PF14496 C-terminal novel E3 ligase, LRR-interacting AK38_RS08970 PF03797 Autotransporter beta-domain AK38_RS08980 PF07906 ShET2 enterotoxin, N-terminal region AK38_RS08985 PF00873 AcrB/AcrD/AcrF family AK38_RS08990 PF00529 HlyD membrane-fusion protein of T1SS AK38_RS08990 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AK38_RS09000 PF08447 PAS fold AK38_RS09000 PF08448 PAS fold AK38_RS09000 PF00563 EAL domain AK38_RS09000 PF00990 Diguanylate cyclase, GGDEF domain AK38_RS09020 PF07715 TonB-dependent Receptor Plug Domain AK38_RS09020 PF00593 TonB dependent receptor AK38_RS09025 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AK38_RS09030 PF04183 IucA / IucC family AK38_RS09030 PF06276 Ferric iron reductase FhuF-like transporter AK38_RS09065 PF00196 Bacterial regulatory proteins, luxR family AK38_RS09065 PF03472 Autoinducer binding domain AK38_RS09070 PF00765 Autoinducer synthase AK38_RS09075 PF02517 CPBP intramembrane metalloprotease AK38_RS09120 PF05736 OprF membrane domain AK38_RS09120 PF00691 OmpA family AK38_RS09130 PF00004 ATPase family associated with various cellular activities (AAA) AK38_RS09130 PF07724 AAA domain (Cdc48 subfamily) AK38_RS09130 PF17871 AAA lid domain AK38_RS09130 PF10431 C-terminal, D2-small domain, of ClpB protein AK38_RS09205 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AK38_RS09205 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AK38_RS09205 PF01276 Orn/Lys/Arg decarboxylase, major domain AK38_RS09210 PF13407 Periplasmic binding protein domain AK38_RS09215 PF00005 ABC transporter AK38_RS09220 PF02653 Branched-chain amino acid transport system / permease component AK38_RS09225 PF07715 TonB-dependent Receptor Plug Domain AK38_RS09235 PF01464 Transglycosylase SLT domain AK38_RS09235 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain AK38_RS09240 PF04362 Bacterial Fe(2+) trafficking AK38_RS09245 PF14815 NUDIX domain AK38_RS09245 PF00730 HhH-GPD superfamily base excision DNA repair protein AK38_RS09245 PF00633 Helix-hairpin-helix motif AK38_RS09245 PF10576 Iron-sulfur binding domain of endonuclease III AK38_RS09250 PF02390 Putative methyltransferase AK38_RS09255 PF04320 Protein with unknown function (DUF469) AK38_RS09260 PF04960 Glutaminase AK38_RS09275 PF07634 RtxA repeat AK38_RS09275 PF11647 Membrane Localization Domain AK38_RS09275 PF12146 Serine aminopeptidase, S33 AK38_RS09275 PF16671 Actin cross-linking domain AK38_RS09275 PF11713 Peptidase C80 family AK38_RS09280 PF06969 HemN C-terminal domain AK38_RS09280 PF04055 Radical SAM superfamily AK38_RS09285 PF01725 Ham1 family AK38_RS09290 PF02594 Uncharacterised ACR, YggU family COG1872 AK38_RS09295 PF02325 YGGT family AK38_RS09300 PF14748 Pyrroline-5-carboxylate reductase dimerisation AK38_RS09300 PF03807 NADP oxidoreductase coenzyme F420-dependent AK38_RS09305 PF01168 Alanine racemase, N-terminal domain AK38_RS09310 PF00437 Type II/IV secretion system protein AK38_RS09315 PF04371 Porphyromonas-type peptidyl-arginine deiminase AK38_RS09320 PF00795 Carbon-nitrogen hydrolase AK38_RS09325 PF03652 Holliday junction resolvase AK38_RS09330 PF02622 Uncharacterized ACR, COG1678 AK38_RS09335 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AK38_RS09335 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AK38_RS09340 PF04452 RNA methyltransferase AK38_RS09345 PF04231 Endonuclease I AK38_RS09350 PF17283 SprT-like zinc ribbon domain AK38_RS09350 PF10263 SprT-like family AK38_RS09355 PF02773 S-adenosylmethionine synthetase, C-terminal domain AK38_RS09355 PF00438 S-adenosylmethionine synthetase, N-terminal domain AK38_RS09355 PF02772 S-adenosylmethionine synthetase, central domain AK38_RS09360 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AK38_RS09360 PF17810 Arginine decarboxylase helical bundle domain AK38_RS09360 PF17944 Arginine decarboxylase C-terminal helical extension AK38_RS09365 PF00355 Rieske [2Fe-2S] domain AK38_RS09370 PF01435 Peptidase family M48 AK38_RS09375 PF00456 Transketolase, thiamine diphosphate binding domain AK38_RS09375 PF02779 Transketolase, pyrimidine binding domain AK38_RS09375 PF02780 Transketolase, C-terminal domain AK38_RS09385 PF02796 Helix-turn-helix domain of resolvase AK38_RS09385 PF00665 Integrase core domain AK38_RS09390 PF01695 IstB-like ATP binding protein AK38_RS09395 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AK38_RS09395 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AK38_RS09400 PF00162 Phosphoglycerate kinase AK38_RS09405 PF01116 Fructose-bisphosphate aldolase class-II AK38_RS09410 PF05552 Conserved TM helix AK38_RS09410 PF00924 Mechanosensitive ion channel AK38_RS09415 PF01810 LysE type translocator AK38_RS09420 PF04402 Protein of unknown function (DUF541) AK38_RS09425 PF03466 LysR substrate binding domain AK38_RS09425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AK38_RS09430 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AK38_RS09435 PF01842 ACT domain AK38_RS09435 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AK38_RS09435 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AK38_RS09440 PF01812 5-formyltetrahydrofolate cyclo-ligase family AK38_RS09450 PF05164 Cell division protein ZapA AK38_RS09455 PF03695 Uncharacterised protein family (UPF0149) AK38_RS09460 PF00557 Metallopeptidase family M24 AK38_RS09460 PF05195 Aminopeptidase P, N-terminal domain AK38_RS09465 PF01494 FAD binding domain AK38_RS09470 PF01494 FAD binding domain AK38_RS09475 PF01571 Aminomethyltransferase folate-binding domain AK38_RS09475 PF08669 Glycine cleavage T-protein C-terminal barrel domain AK38_RS09480 PF01597 Glycine cleavage H-protein AK38_RS09485 PF02347 Glycine cleavage system P-protein AK38_RS09510 PF03006 Haemolysin-III related AK38_RS09520 PF01571 Aminomethyltransferase folate-binding domain AK38_RS09525 PF03937 Flavinator of succinate dehydrogenase AK38_RS09530 PF07254 Membrane-bound toxin component of toxin-antitoxin system AK38_RS09535 PF00486 Transcriptional regulatory protein, C terminal AK38_RS09535 PF00072 Response regulator receiver domain AK38_RS09540 PF00672 HAMP domain AK38_RS09540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AK38_RS09540 PF00512 His Kinase A (phospho-acceptor) domain AK38_RS09545 PF06123 Inner membrane protein CreD AK38_RS09550 PF00258 Flavodoxin AK38_RS09555 PF00589 Phage integrase family AK38_RS09555 PF02899 Phage integrase, N-terminal SAM-like domain AK38_RS09560 PF13098 Thioredoxin-like domain AK38_RS09560 PF10411 Disulfide bond isomerase protein N-terminus AK38_RS09565 PF02272 DHHA1 domain AK38_RS09565 PF01368 DHH family AK38_RS09565 PF17768 RecJ OB domain AK38_RS09575 PF01336 OB-fold nucleic acid binding domain AK38_RS09575 PF00152 tRNA synthetases class II (D, K and N) AK38_RS09585 PF14659 Phage integrase, N-terminal SAM-like domain AK38_RS09585 PF00589 Phage integrase family AK38_RS09585 PF13356 Arm DNA-binding domain AK38_RS09610 PF15723 Motility quorum-sensing regulator, toxin of MqsA AK38_RS09615 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA AK38_RS09710 PF03551 Transcriptional regulator PadR-like family AK38_RS09715 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family AK38_RS09725 PF13407 Periplasmic binding protein domain AK38_RS09730 PF02653 Branched-chain amino acid transport system / permease component AK38_RS09735 PF00005 ABC transporter AK38_RS09740 PF00005 ABC transporter AK38_RS09740 PF17912 MalK OB fold domain AK38_RS09745 PF13416 Bacterial extracellular solute-binding protein AK38_RS09750 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS09755 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS09760 PF07745 Glycosyl hydrolase family 53 AK38_RS09765 PF08532 Beta-galactosidase trimerisation domain AK38_RS09765 PF08533 Beta-galactosidase C-terminal domain AK38_RS09765 PF02449 Beta-galactosidase AK38_RS09770 PF02378 Phosphotransferase system, EIIC AK38_RS09770 PF00367 phosphotransferase system, EIIB AK38_RS09775 PF02264 LamB porin AK38_RS09780 PF00356 Bacterial regulatory proteins, lacI family AK38_RS09785 PF17137 Domain of unknown function (DUF5110) AK38_RS09785 PF16338 Domain of unknown function (DUF4968) AK38_RS09785 PF13802 Galactose mutarotase-like AK38_RS09785 PF01055 Glycosyl hydrolases family 31 AK38_RS09790 PF07690 Major Facilitator Superfamily AK38_RS09795 PF00356 Bacterial regulatory proteins, lacI family AK38_RS09810 PF01116 Fructose-bisphosphate aldolase class-II AK38_RS09820 PF00884 Sulfatase AK38_RS09825 PF04055 Radical SAM superfamily AK38_RS09825 PF13186 Iron-sulfur cluster-binding domain AK38_RS09830 PF07470 Glycosyl Hydrolase Family 88 AK38_RS09840 PF01979 Amidohydrolase family AK38_RS09845 PF03610 PTS system fructose IIA component AK38_RS09850 PF03613 PTS system mannose/fructose/sorbose family IID component AK38_RS09855 PF03609 PTS system sorbose-specific iic component AK38_RS09860 PF03830 PTS system sorbose subfamily IIB component AK38_RS09865 PF01380 SIS domain AK38_RS09870 PF08013 Tagatose 6 phosphate kinase AK38_RS09875 PF08220 DeoR-like helix-turn-helix domain AK38_RS09875 PF00455 DeoR C terminal sensor domain AK38_RS09880 PF00884 Sulfatase AK38_RS09885 PF01797 Transposase IS200 like AK38_RS09890 PF00665 Integrase core domain AK38_RS09890 PF02796 Helix-turn-helix domain of resolvase AK38_RS09905 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain AK38_RS09905 PF02278 Polysaccharide lyase family 8, super-sandwich domain AK38_RS09905 PF09093 Lyase, catalytic AK38_RS09905 PF09092 Lyase, N terminal AK38_RS09930 PF00484 Carbonic anhydrase AK38_RS09945 PF03958 Bacterial type II/III secretion system short domain AK38_RS09945 PF00263 Bacterial type II and III secretion system protein AK38_RS09965 PF08334 Type II secretion system (T2SS), protein G AK38_RS09965 PF07963 Prokaryotic N-terminal methylation motif AK38_RS09975 PF02501 Type II secretion system (T2SS), protein I AK38_RS09975 PF07963 Prokaryotic N-terminal methylation motif AK38_RS10000 PF01478 Type IV leader peptidase family AK38_RS10000 PF06750 Bacterial Peptidase A24 N-terminal domain AK38_RS10020 PF02203 Tar ligand binding domain homologue AK38_RS10020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AK38_RS10020 PF00672 HAMP domain AK38_RS10035 PF03466 LysR substrate binding domain AK38_RS10035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AK38_RS10040 PF07690 Major Facilitator Superfamily AK38_RS10045 PF03466 LysR substrate binding domain AK38_RS10045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AK38_RS10050 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AK38_RS10050 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AK38_RS10055 PF00356 Bacterial regulatory proteins, lacI family AK38_RS10060 PF01568 Molydopterin dinucleotide binding domain AK38_RS10060 PF00384 Molybdopterin oxidoreductase AK38_RS10065 PF01553 Acyltransferase AK38_RS10065 PF13193 AMP-binding enzyme C-terminal domain AK38_RS10065 PF00501 AMP-binding enzyme AK38_RS10070 PF07690 Major Facilitator Superfamily AK38_RS10085 PF00248 Aldo/keto reductase family AK38_RS10090 PF02976 DNA mismatch repair enzyme MutH AK38_RS10105 PF00293 NUDIX domain AK38_RS10110 PF05524 PEP-utilising enzyme, N-terminal AK38_RS10110 PF01590 GAF domain AK38_RS10110 PF02896 PEP-utilising enzyme, TIM barrel domain AK38_RS10110 PF00391 PEP-utilising enzyme, mobile domain AK38_RS10115 PF01790 Prolipoprotein diacylglyceryl transferase AK38_RS10120 PF00303 Thymidylate synthase AK38_RS10135 PF00665 Integrase core domain AK38_RS10135 PF02796 Helix-turn-helix domain of resolvase AK38_RS10150 PF00501 AMP-binding enzyme AK38_RS10150 PF00550 Phosphopantetheine attachment site AK38_RS10150 PF08242 Methyltransferase domain AK38_RS10150 PF00668 Condensation domain AK38_RS10155 PF00668 Condensation domain AK38_RS10155 PF00501 AMP-binding enzyme AK38_RS10155 PF13193 AMP-binding enzyme C-terminal domain AK38_RS10160 PF00668 Condensation domain AK38_RS10160 PF00501 AMP-binding enzyme AK38_RS10160 PF08242 Methyltransferase domain AK38_RS10160 PF00550 Phosphopantetheine attachment site AK38_RS10175 PF00975 Thioesterase domain AK38_RS10185 PF04954 Siderophore-interacting protein AK38_RS10185 PF00664 ABC transporter transmembrane region AK38_RS10185 PF00005 ABC transporter AK38_RS10185 PF08021 Siderophore-interacting FAD-binding domain AK38_RS10190 PF00005 ABC transporter AK38_RS10190 PF00664 ABC transporter transmembrane region AK38_RS10205 PF02447 GntP family permease AK38_RS10220 PF04717 Type VI secretion system, phage-baseplate injector AK38_RS10230 PF05593 RHS Repeat AK38_RS10230 PF03527 RHS protein AK38_RS10245 PF00939 Sodium:sulfate symporter transmembrane region AK38_RS10250 PF00356 Bacterial regulatory proteins, lacI family AK38_RS10295 PF13677 Membrane MotB of proton-channel complex MotA/MotB AK38_RS10295 PF00691 OmpA family AK38_RS10300 PF01618 MotA/TolQ/ExbB proton channel family AK38_RS10305 PF04545 Sigma-70, region 4 AK38_RS10305 PF04542 Sigma-70 region 2 AK38_RS10330 PF02465 Flagellar hook-associated protein 2 N-terminus AK38_RS10330 PF07196 Flagellin hook IN motif AK38_RS10330 PF07195 Flagellar hook-associated protein 2 C-terminus AK38_RS10335 PF00669 Bacterial flagellin N-terminal helical region AK38_RS10335 PF00700 Bacterial flagellin C-terminal helical region AK38_RS10340 PF00700 Bacterial flagellin C-terminal helical region AK38_RS10340 PF00669 Bacterial flagellin N-terminal helical region AK38_RS10345 PF00700 Bacterial flagellin C-terminal helical region AK38_RS10345 PF00669 Bacterial flagellin N-terminal helical region AK38_RS10350 PF18500 CadC C-terminal domain 1 AK38_RS10350 PF00486 Transcriptional regulatory protein, C terminal AK38_RS10370 PF00460 Flagella basal body rod protein AK38_RS10370 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AK38_RS10380 PF02119 Flagellar P-ring protein AK38_RS10385 PF02107 Flagellar L-ring protein AK38_RS10390 PF00460 Flagella basal body rod protein AK38_RS10390 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AK38_RS10395 PF00460 Flagella basal body rod protein AK38_RS10395 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AK38_RS10415 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AK38_RS10415 PF00460 Flagella basal body rod protein AK38_RS10415 PF07559 Flagellar basal body protein FlaE AK38_RS10420 PF13861 FlgD Tudor-like domain AK38_RS10420 PF03963 Flagellar hook capping protein - N-terminal region AK38_RS10420 PF13860 FlgD Ig-like domain AK38_RS10425 PF00460 Flagella basal body rod protein AK38_RS10425 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AK38_RS10430 PF00460 Flagella basal body rod protein AK38_RS10435 PF13144 Chaperone for flagella basal body P-ring formation AK38_RS10455 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AK38_RS10455 PF18269 T3SS EscN ATPase C-terminal domain AK38_RS10470 PF01514 Secretory protein of YscJ/FliF family AK38_RS10470 PF08345 Flagellar M-ring protein C-terminal AK38_RS10475 PF02049 Flagellar hook-basal body complex protein FliE AK38_RS10480 PF00158 Sigma-54 interaction domain AK38_RS10480 PF00072 Response regulator receiver domain AK38_RS10480 PF02954 Bacterial regulatory protein, Fis family AK38_RS10490 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AK38_RS10495 PF00813 FliP family AK38_RS10500 PF01313 Bacterial export proteins, family 3 AK38_RS10505 PF01311 Bacterial export proteins, family 1 AK38_RS10510 PF01312 FlhB HrpN YscU SpaS Family AK38_RS10530 PF01497 Periplasmic binding protein AK38_RS10535 PF00419 Fimbrial protein AK38_RS10535 PF09222 Fimbrial adhesin F17-AG, lectin domain AK38_RS10540 PF02753 Pili assembly chaperone PapD, C-terminal domain AK38_RS10540 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AK38_RS10545 PF00577 Outer membrane usher protein AK38_RS10545 PF13953 PapC C-terminal domain AK38_RS10545 PF13954 PapC N-terminal domain AK38_RS10560 PF01797 Transposase IS200 like AK38_RS10575 PF04972 BON domain AK38_RS10575 PF00263 Bacterial type II and III secretion system protein AK38_RS10575 PF13629 Pilus formation protein N terminal region AK38_RS10580 PF13629 Pilus formation protein N terminal region AK38_RS10580 PF00263 Bacterial type II and III secretion system protein AK38_RS10580 PF04972 BON domain AK38_RS10595 PF00437 Type II/IV secretion system protein AK38_RS10630 PF02472 Biopolymer transport protein ExbD/TolR AK38_RS10635 PF01618 MotA/TolQ/ExbB proton channel family AK38_RS10640 PF01053 Cys/Met metabolism PLP-dependent enzyme AK38_RS10645 PF09335 SNARE associated Golgi protein AK38_RS10650 PF12833 Helix-turn-helix domain AK38_RS10650 PF06719 AraC-type transcriptional regulator N-terminus AK38_RS10655 PF00465 Iron-containing alcohol dehydrogenase AK38_RS10665 PF00248 Aldo/keto reductase family AK38_RS10675 PF07731 Multicopper oxidase AK38_RS10675 PF07732 Multicopper oxidase AK38_RS10680 PF01553 Acyltransferase AK38_RS10685 PF03989 DNA gyrase C-terminal domain, beta-propeller AK38_RS10685 PF00521 DNA gyrase/topoisomerase IV, subunit A AK38_RS10695 PF02525 Flavodoxin-like fold AK38_RS10700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AK38_RS10700 PF03466 LysR substrate binding domain AK38_RS10705 PF00986 DNA gyrase B subunit, carboxyl terminus AK38_RS10705 PF00204 DNA gyrase B AK38_RS10705 PF01751 Toprim domain AK38_RS10705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AK38_RS10710 PF05728 Uncharacterised protein family (UPF0227) AK38_RS10715 PF00149 Calcineurin-like phosphoesterase AK38_RS10720 PF06853 Protein of unknown function (DUF1249) AK38_RS10725 PF00293 NUDIX domain AK38_RS10730 PF02321 Outer membrane efflux protein AK38_RS10740 PF06693 Protein of unknown function (DUF1190) AK38_RS10745 PF03738 Glutathionylspermidine synthase preATP-grasp AK38_RS10750 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AK38_RS10755 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AK38_RS10760 PF04380 Membrane fusogenic activity AK38_RS10765 PF13520 Amino acid permease AK38_RS10770 PF00294 pfkB family carbohydrate kinase AK38_RS10770 PF01467 Cytidylyltransferase-like AK38_RS10775 PF08335 GlnD PII-uridylyltransferase AK38_RS10775 PF03710 Glutamate-ammonia ligase adenylyltransferase AK38_RS10780 PF01928 CYTH domain AK38_RS10785 PF08239 Bacterial SH3 domain AK38_RS10790 PF01743 Poly A polymerase head domain AK38_RS10790 PF01966 HD domain AK38_RS10790 PF12627 Probable RNA and SrmB- binding site of polymerase A AK38_RS10795 PF02673 Bacitracin resistance protein BacA AK38_RS10800 PF02152 Dihydroneopterin aldolase AK38_RS10805 PF02660 Glycerol-3-phosphate acyltransferase AK38_RS10810 PF00814 Glycoprotease family AK38_RS10815 PF01165 Ribosomal protein S21 AK38_RS10820 PF08278 DNA primase DnaG DnaB-binding AK38_RS10820 PF01807 CHC2 zinc finger AK38_RS10820 PF08275 DNA primase catalytic core, N-terminal domain AK38_RS10820 PF10410 DnaB-helicase binding domain of primase AK38_RS10825 PF04542 Sigma-70 region 2 AK38_RS10825 PF04546 Sigma-70, non-essential region AK38_RS10825 PF00140 Sigma-70 factor, region 1.2 AK38_RS10825 PF04545 Sigma-70, region 4 AK38_RS10825 PF04539 Sigma-70 region 3 AK38_RS10825 PF03979 Sigma-70 factor, region 1.1 AK38_RS10860 PF01695 IstB-like ATP binding protein AK38_RS10865 PF02796 Helix-turn-helix domain of resolvase AK38_RS10865 PF00665 Integrase core domain AK38_RS10895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AK38_RS10895 PF03466 LysR substrate binding domain AK38_RS10915 PF01042 Endoribonuclease L-PSP AK38_RS10935 PF00155 Aminotransferase class I and II AK38_RS10955 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AK38_RS10955 PF00529 HlyD membrane-fusion protein of T1SS AK38_RS10960 PF04632 Fusaric acid resistance protein family AK38_RS10970 PF00933 Glycosyl hydrolase family 3 N terminal domain AK38_RS10970 PF14310 Fibronectin type III-like domain AK38_RS10970 PF01915 Glycosyl hydrolase family 3 C-terminal domain AK38_RS10980 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS10985 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS10990 PF01547 Bacterial extracellular solute-binding protein AK38_RS10995 PF00356 Bacterial regulatory proteins, lacI family AK38_RS11000 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain AK38_RS11005 PF03459 TOBE domain AK38_RS11005 PF17912 MalK OB fold domain AK38_RS11005 PF00005 ABC transporter AK38_RS11025 PF04829 Pre-toxin domain with VENN motif AK38_RS11025 PF05860 haemagglutination activity domain AK38_RS11025 PF13332 Hemagglutinin repeat AK38_RS11025 PF13018 Extended Signal Peptide of Type V secretion system AK38_RS11050 PF04829 Pre-toxin domain with VENN motif AK38_RS11050 PF13018 Extended Signal Peptide of Type V secretion system AK38_RS11050 PF13332 Hemagglutinin repeat AK38_RS11050 PF05860 haemagglutination activity domain AK38_RS11055 PF08479 POTRA domain, ShlB-type AK38_RS11055 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AK38_RS11055 PF17287 POTRA domain AK38_RS11060 PF00092 von Willebrand factor type A domain AK38_RS11065 PF02342 TerD domain AK38_RS11075 PF00092 von Willebrand factor type A domain AK38_RS11095 PF03729 Short repeat of unknown function (DUF308) AK38_RS11100 PF07992 Pyridine nucleotide-disulphide oxidoreductase AK38_RS11100 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AK38_RS11105 PF05175 Methyltransferase small domain AK38_RS11110 PF03797 Autotransporter beta-domain AK38_RS11115 PF01863 Protein of unknown function DUF45 AK38_RS11120 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AK38_RS11125 PF00375 Sodium:dicarboxylate symporter family AK38_RS11130 PF01797 Transposase IS200 like AK38_RS11135 PF10688 Bacterial inner membrane protein AK38_RS11140 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AK38_RS11140 PF08666 SAF domain AK38_RS11145 PF01232 Mannitol dehydrogenase Rossmann domain AK38_RS11145 PF08125 Mannitol dehydrogenase C-terminal domain AK38_RS11150 PF02614 Glucuronate isomerase AK38_RS11160 PF07690 Major Facilitator Superfamily AK38_RS11165 PF07729 FCD domain AK38_RS11165 PF00392 Bacterial regulatory proteins, gntR family AK38_RS11175 PF09335 SNARE associated Golgi protein AK38_RS11180 PF13721 SecD export protein N-terminal TM region AK38_RS11195 PF05957 Bacterial protein of unknown function (DUF883) AK38_RS11200 PF07332 Putative Actinobacterial Holin-X, holin superfamily III AK38_RS11210 PF07681 DoxX AK38_RS11220 PF02796 Helix-turn-helix domain of resolvase AK38_RS11220 PF00665 Integrase core domain AK38_RS11225 PF01695 IstB-like ATP binding protein AK38_RS11230 PF00293 NUDIX domain AK38_RS11235 PF02810 SEC-C motif AK38_RS11235 PF07517 SecA DEAD-like domain AK38_RS11235 PF01043 SecA preprotein cross-linking domain AK38_RS11235 PF07516 SecA Wing and Scaffold domain AK38_RS11240 PF06558 Secretion monitor precursor protein (SecM) AK38_RS11250 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AK38_RS11255 PF12327 FtsZ family, C-terminal domain AK38_RS11255 PF00091 Tubulin/FtsZ family, GTPase domain AK38_RS11260 PF02491 SHS2 domain inserted in FTSA AK38_RS11265 PF08478 POTRA domain, FtsQ-type AK38_RS11265 PF03799 Cell division protein FtsQ AK38_RS11270 PF01820 D-ala D-ala ligase N-terminus AK38_RS11270 PF07478 D-ala D-ala ligase C-terminus AK38_RS11275 PF01225 Mur ligase family, catalytic domain AK38_RS11275 PF02875 Mur ligase family, glutamate ligase domain AK38_RS11275 PF08245 Mur ligase middle domain AK38_RS11280 PF04101 Glycosyltransferase family 28 C-terminal domain AK38_RS11280 PF03033 Glycosyltransferase family 28 N-terminal domain AK38_RS11285 PF01098 Cell cycle protein AK38_RS11290 PF08245 Mur ligase middle domain AK38_RS11290 PF02875 Mur ligase family, glutamate ligase domain AK38_RS11295 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AK38_RS11295 PF00953 Glycosyl transferase family 4 AK38_RS11300 PF08245 Mur ligase middle domain AK38_RS11300 PF01225 Mur ligase family, catalytic domain AK38_RS11300 PF02875 Mur ligase family, glutamate ligase domain AK38_RS11305 PF08245 Mur ligase middle domain AK38_RS11305 PF02875 Mur ligase family, glutamate ligase domain AK38_RS11305 PF01225 Mur ligase family, catalytic domain AK38_RS11310 PF03717 Penicillin-binding Protein dimerisation domain AK38_RS11310 PF00905 Penicillin binding protein transpeptidase domain AK38_RS11315 PF04999 Cell division protein FtsL AK38_RS11320 PF01795 MraW methylase family AK38_RS11325 PF02381 MraZ protein, putative antitoxin-like AK38_RS11330 PF06610 L-alanine exporter AK38_RS11335 PF00356 Bacterial regulatory proteins, lacI family AK38_RS11335 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AK38_RS11350 PF10369 Small subunit of acetolactate synthase AK38_RS11355 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AK38_RS11355 PF00205 Thiamine pyrophosphate enzyme, central domain AK38_RS11355 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AK38_RS11365 PF00501 AMP-binding enzyme AK38_RS11375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AK38_RS11375 PF03466 LysR substrate binding domain AK38_RS11390 PF01797 Transposase IS200 like AK38_RS11395 PF00682 HMGL-like AK38_RS11395 PF08502 LeuA allosteric (dimerisation) domain AK38_RS11400 PF00180 Isocitrate/isopropylmalate dehydrogenase AK38_RS11405 PF00330 Aconitase family (aconitate hydratase) AK38_RS11410 PF00694 Aconitase C-terminal domain AK38_RS11415 PF07690 Major Facilitator Superfamily AK38_RS11420 PF00665 Integrase core domain AK38_RS11420 PF02796 Helix-turn-helix domain of resolvase AK38_RS11425 PF01695 IstB-like ATP binding protein AK38_RS11440 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AK38_RS11440 PF12793 Sugar transport-related sRNA regulator N-term AK38_RS11455 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS11460 PF00005 ABC transporter AK38_RS11465 PF09335 SNARE associated Golgi protein AK38_RS11470 PF03104 DNA polymerase family B, exonuclease domain AK38_RS11470 PF00136 DNA polymerase family B AK38_RS11475 PF18337 RapA N-terminal Tudor like domain AK38_RS11475 PF18339 RapA N-terminal Tudor like domain 1 AK38_RS11475 PF00176 SNF2 family N-terminal domain AK38_RS11475 PF12137 RNA polymerase recycling family C-terminal AK38_RS11475 PF00271 Helicase conserved C-terminal domain AK38_RS11490 PF00691 OmpA family AK38_RS11490 PF05736 OprF membrane domain AK38_RS11530 PF04717 Type VI secretion system, phage-baseplate injector AK38_RS11535 PF17871 AAA lid domain AK38_RS11535 PF00004 ATPase family associated with various cellular activities (AAA) AK38_RS11535 PF10431 C-terminal, D2-small domain, of ClpB protein AK38_RS11535 PF07724 AAA domain (Cdc48 subfamily) AK38_RS11580 PF00849 RNA pseudouridylate synthase AK38_RS11585 PF05099 Tellurite resistance protein TerB AK38_RS11585 PF00226 DnaJ domain AK38_RS11590 PF03968 OstA-like protein AK38_RS11590 PF04453 LPS transport system D AK38_RS11595 PF09312 SurA N-terminal domain AK38_RS11595 PF00639 PPIC-type PPIASE domain AK38_RS11600 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AK38_RS11605 PF00398 Ribosomal RNA adenine dimethylase AK38_RS11610 PF04379 ApaG domain AK38_RS11615 PF00149 Calcineurin-like phosphoesterase AK38_RS11630 PF01797 Transposase IS200 like AK38_RS11640 PF00186 Dihydrofolate reductase AK38_RS11645 PF12821 Threonine/Serine exporter, ThrE AK38_RS11650 PF06738 Putative threonine/serine exporter AK38_RS11655 PF01810 LysE type translocator AK38_RS11660 PF02142 MGS-like domain AK38_RS11660 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AK38_RS11660 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AK38_RS11665 PF00117 Glutamine amidotransferase class-I AK38_RS11665 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AK38_RS11670 PF01113 Dihydrodipicolinate reductase, N-terminus AK38_RS11670 PF05173 Dihydrodipicolinate reductase, C-terminus AK38_RS11675 PF01797 Transposase IS200 like AK38_RS11690 PF02401 LytB protein AK38_RS11695 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AK38_RS11700 PF01252 Signal peptidase (SPase) II AK38_RS11705 PF08264 Anticodon-binding domain of tRNA AK38_RS11705 PF00133 tRNA synthetases class I (I, L, M and V) AK38_RS11705 PF06827 Zinc finger found in FPG and IleRS AK38_RS11710 PF06574 FAD synthetase AK38_RS11710 PF01687 Riboflavin kinase AK38_RS11720 PF01649 Ribosomal protein S20 AK38_RS11725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AK38_RS11725 PF03466 LysR substrate binding domain AK38_RS11730 PF06965 Na+/H+ antiporter 1 AK38_RS11735 PF00226 DnaJ domain AK38_RS11735 PF00684 DnaJ central domain AK38_RS11735 PF01556 DnaJ C terminal domain AK38_RS11740 PF00012 Hsp70 protein AK38_RS11745 PF01184 GPR1/FUN34/yaaH family AK38_RS11755 PF07690 Major Facilitator Superfamily AK38_RS11760 PF00994 Probable molybdopterin binding domain AK38_RS11765 PF00923 Transaldolase/Fructose-6-phosphate aldolase AK38_RS11770 PF03883 Peroxide stress protein YaaA AK38_RS11775 PF14821 Threonine synthase N terminus AK38_RS11775 PF00291 Pyridoxal-phosphate dependent enzyme AK38_RS11780 PF00288 GHMP kinases N terminal domain AK38_RS11780 PF08544 GHMP kinases C terminal AK38_RS11785 PF00696 Amino acid kinase family AK38_RS11785 PF00742 Homoserine dehydrogenase AK38_RS11785 PF03447 Homoserine dehydrogenase, NAD binding domain AK38_RS11785 PF01842 ACT domain AK38_RS11785 PF13840 ACT domain AK38_RS11790 PF00072 Response regulator receiver domain AK38_RS11790 PF00486 Transcriptional regulatory protein, C terminal AK38_RS11795 PF05981 CreA protein AK38_RS11800 PF06445 GyrI-like small molecule binding domain AK38_RS11800 PF12833 Helix-turn-helix domain AK38_RS11805 PF00300 Histidine phosphatase superfamily (branch 1) AK38_RS11810 PF01931 Protein of unknown function DUF84 AK38_RS11815 PF01371 Trp repressor protein AK38_RS11820 PF14718 Soluble lytic murein transglycosylase L domain AK38_RS11820 PF01464 Transglycosylase SLT domain AK38_RS11825 PF00689 Cation transporting ATPase, C-terminus AK38_RS11825 PF00690 Cation transporter/ATPase, N-terminus AK38_RS11835 PF17152 Periplasmic sensor domain AK38_RS11835 PF00990 Diguanylate cyclase, GGDEF domain AK38_RS11840 PF00691 OmpA family AK38_RS11855 PF13521 AAA domain AK38_RS11855 PF01381 Helix-turn-helix AK38_RS11860 PF18073 Rubredoxin metal binding domain AK38_RS11865 PF18429 Domain of unknown function (DUF5609) AK38_RS11870 PF10144 Bacterial virulence factor haemolysin AK38_RS11875 PF01048 Phosphorylase superfamily AK38_RS11880 PF01676 Metalloenzyme superfamily AK38_RS11895 PF01791 DeoC/LacD family aldolase AK38_RS11900 PF07670 Nucleoside recognition AK38_RS11900 PF07662 Na+ dependent nucleoside transporter C-terminus AK38_RS11900 PF01773 Na+ dependent nucleoside transporter N-terminus AK38_RS11905 PF01026 TatD related DNase AK38_RS11910 PF01734 Patatin-like phospholipase AK38_RS11915 PF07043 Protein of unknown function (DUF1328) AK38_RS11920 PF04972 BON domain AK38_RS11925 PF16658 Class II release factor RF3, C-terminal domain AK38_RS11925 PF00009 Elongation factor Tu GTP binding domain AK38_RS11925 PF03144 Elongation factor Tu domain 2 AK38_RS11930 PF00583 Acetyltransferase (GNAT) family AK38_RS11935 PF03603 DNA polymerase III psi subunit AK38_RS11940 PF05175 Methyltransferase small domain AK38_RS11940 PF08468 Methyltransferase small domain N-terminal AK38_RS11950 PF07256 Protein of unknown function (DUF1435) AK38_RS11955 PF00990 Diguanylate cyclase, GGDEF domain AK38_RS11960 PF01095 Pectinesterase AK38_RS11980 PF00873 AcrB/AcrD/AcrF family AK38_RS11985 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AK38_RS12005 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AK38_RS12010 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AK38_RS12010 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AK38_RS12025 PF00005 ABC transporter AK38_RS12030 PF02653 Branched-chain amino acid transport system / permease component AK38_RS12035 PF02653 Branched-chain amino acid transport system / permease component AK38_RS12040 PF13407 Periplasmic binding protein domain AK38_RS12045 PF01791 DeoC/LacD family aldolase AK38_RS12050 PF03992 Antibiotic biosynthesis monooxygenase AK38_RS12055 PF10696 Protein of unknown function (DUF2501) AK38_RS12060 PF05524 PEP-utilising enzyme, N-terminal AK38_RS12060 PF00391 PEP-utilising enzyme, mobile domain AK38_RS12060 PF02896 PEP-utilising enzyme, TIM barrel domain AK38_RS12060 PF00381 PTS HPr component phosphorylation site AK38_RS12060 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AK38_RS12070 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AK38_RS12075 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AK38_RS12080 PF12833 Helix-turn-helix domain AK38_RS12090 PF05987 Bacterial protein of unknown function (DUF898) AK38_RS12140 PF01555 DNA methylase AK38_RS12160 PF07728 AAA domain (dynein-related subfamily) AK38_RS12160 PF12102 Domain of unknown function (DUF3578) AK38_RS12165 PF00665 Integrase core domain AK38_RS12165 PF02796 Helix-turn-helix domain of resolvase AK38_RS12170 PF01695 IstB-like ATP binding protein AK38_RS12180 PF07338 Protein of unknown function (DUF1471) AK38_RS12185 PF18158 Adaptive response protein AidB N-terminal domain AK38_RS12185 PF02770 Acyl-CoA dehydrogenase, middle domain AK38_RS12185 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AK38_RS12190 PF08032 RNA 2'-O ribose methyltransferase substrate binding AK38_RS12190 PF00588 SpoU rRNA Methylase family AK38_RS12195 PF08461 Ribonuclease R winged-helix domain AK38_RS12195 PF08206 Ribonuclease B OB domain AK38_RS12195 PF00773 RNB domain AK38_RS12195 PF17876 Cold shock domain AK38_RS12195 PF00575 S1 RNA binding domain AK38_RS12200 PF02082 Transcriptional regulator AK38_RS12205 PF00709 Adenylosuccinate synthetase AK38_RS12210 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) AK38_RS12215 PF01145 SPFH domain / Band 7 family AK38_RS12220 PF12221 Bacterial membrane protein N terminal AK38_RS12220 PF01145 SPFH domain / Band 7 family AK38_RS12225 PF16360 GTP-binding GTPase Middle Region AK38_RS12225 PF13167 GTP-binding GTPase N-terminal AK38_RS12225 PF01926 50S ribosome-binding GTPase AK38_RS12230 PF17209 Hfq protein AK38_RS12240 PF01119 DNA mismatch repair protein, C-terminal domain AK38_RS12240 PF08676 MutL C terminal dimerisation domain AK38_RS12245 PF01520 N-acetylmuramoyl-L-alanine amidase AK38_RS12250 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AK38_RS12255 PF01256 Carbohydrate kinase AK38_RS12255 PF03853 YjeF-related protein N-terminus AK38_RS12260 PF08331 Domain of unknown function (DUF1730) AK38_RS12270 PF00929 Exonuclease AK38_RS12280 PF03193 RsgA GTPase AK38_RS12285 PF02666 Phosphatidylserine decarboxylase AK38_RS12290 PF00924 Mechanosensitive ion channel AK38_RS12290 PF12795 Mechanosensitive ion channel porin domain AK38_RS12290 PF12794 Mechanosensitive ion channel inner membrane domain 1 AK38_RS12295 PF00152 tRNA synthetases class II (D, K and N) AK38_RS12305 PF00890 FAD binding domain AK38_RS12305 PF02910 Fumarate reductase flavoprotein C-term AK38_RS12310 PF13183 4Fe-4S dicluster domain AK38_RS12310 PF13085 2Fe-2S iron-sulfur cluster binding domain AK38_RS12315 PF02300 Fumarate reductase subunit C AK38_RS12320 PF02313 Fumarate reductase subunit D AK38_RS12335 PF00893 Small Multidrug Resistance protein AK38_RS12340 PF01132 Elongation factor P (EF-P) OB domain AK38_RS12340 PF09285 Elongation factor P, C-terminal AK38_RS12340 PF08207 Elongation factor P (EF-P) KOW-like domain AK38_RS12345 PF04055 Radical SAM superfamily AK38_RS12350 PF13698 Domain of unknown function (DUF4156) AK38_RS12355 PF00118 TCP-1/cpn60 chaperonin family AK38_RS12360 PF00166 Chaperonin 10 Kd subunit AK38_RS12365 PF04186 FxsA cytoplasmic membrane protein AK38_RS12370 PF10415 Fumarase C C-terminus AK38_RS12370 PF00206 Lyase AK38_RS12375 PF03605 Anaerobic c4-dicarboxylate membrane transporter AK38_RS12380 PF03091 CutA1 divalent ion tolerance protein AK38_RS12385 PF02683 Cytochrome C biogenesis protein transmembrane region AK38_RS12385 PF11412 Disulphide bond corrector protein DsbC AK38_RS12390 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AK38_RS12390 PF00384 Molybdopterin oxidoreductase AK38_RS12390 PF01568 Molydopterin dinucleotide binding domain AK38_RS12395 PF12800 4Fe-4S binding domain AK38_RS12395 PF13247 4Fe-4S dicluster domain AK38_RS12400 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AK38_RS12400 PF07992 Pyridine nucleotide-disulphide oxidoreductase AK38_RS12400 PF13247 4Fe-4S dicluster domain AK38_RS12435 PF06379 L-rhamnose-proton symport protein (RhaT) AK38_RS12440 PF02311 AraC-like ligand binding domain AK38_RS12440 PF12833 Helix-turn-helix domain AK38_RS12445 PF12833 Helix-turn-helix domain AK38_RS12445 PF02311 AraC-like ligand binding domain AK38_RS12460 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AK38_RS12460 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AK38_RS12465 PF06134 L-rhamnose isomerase (RhaA) AK38_RS12470 PF00596 Class II Aldolase and Adducin N-terminal domain AK38_RS12475 PF00465 Iron-containing alcohol dehydrogenase AK38_RS12480 PF05336 L-rhamnose mutarotase AK38_RS12485 PF00436 Single-strand binding protein family AK38_RS12490 PF17755 UvrA DNA-binding domain AK38_RS12490 PF17760 UvrA interaction domain AK38_RS12490 PF00005 ABC transporter AK38_RS12495 PF04237 YjbR AK38_RS12500 PF00155 Aminotransferase class I and II AK38_RS12505 PF01168 Alanine racemase, N-terminal domain AK38_RS12505 PF00842 Alanine racemase, C-terminal domain AK38_RS12510 PF03796 DnaB-like helicase C terminal domain AK38_RS12510 PF00772 DnaB-like helicase N terminal domain AK38_RS12515 PF08240 Alcohol dehydrogenase GroES-like domain AK38_RS12515 PF00107 Zinc-binding dehydrogenase AK38_RS12520 PF09583 Phage shock protein G (Phageshock_PspG) AK38_RS12525 PF01207 Dihydrouridine synthase (Dus) AK38_RS12530 PF01475 Ferric uptake regulator family AK38_RS12535 PF00717 Peptidase S24-like AK38_RS12535 PF01726 LexA DNA binding domain AK38_RS12540 PF01219 Prokaryotic diacylglycerol kinase AK38_RS12545 PF01553 Acyltransferase AK38_RS12550 PF01040 UbiA prenyltransferase family AK38_RS12555 PF04345 Chorismate lyase AK38_RS12560 PF12951 Passenger-associated-transport-repeat AK38_RS12565 PF01565 FAD binding domain AK38_RS12565 PF08031 Berberine and berberine like AK38_RS12585 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AK38_RS12590 PF13954 PapC N-terminal domain AK38_RS12590 PF13953 PapC C-terminal domain AK38_RS12590 PF00577 Outer membrane usher protein AK38_RS12600 PF01797 Transposase IS200 like AK38_RS12610 PF02342 TerD domain AK38_RS12615 PF02342 TerD domain AK38_RS12620 PF03741 Integral membrane protein TerC family AK38_RS12625 PF05099 Tellurite resistance protein TerB AK38_RS12630 PF02342 TerD domain AK38_RS12635 PF02342 TerD domain AK38_RS12655 PF15608 PELOTA RNA binding domain AK38_RS12655 PF11202 Phosphoribosyl transferase (PRTase) AK38_RS12675 PF04055 Radical SAM superfamily AK38_RS12680 PF06228 Haem utilisation ChuX/HutX AK38_RS12685 PF13460 NAD(P)H-binding AK38_RS12690 PF07715 TonB-dependent Receptor Plug Domain AK38_RS12690 PF00593 TonB dependent receptor AK38_RS12695 PF05171 Haemin-degrading HemS.ChuX domain AK38_RS12700 PF01497 Periplasmic binding protein AK38_RS12705 PF01032 FecCD transport family AK38_RS12710 PF00005 ABC transporter AK38_RS12715 PF01053 Cys/Met metabolism PLP-dependent enzyme AK38_RS12720 PF03222 Tryptophan/tyrosine permease family AK38_RS12725 PF03466 LysR substrate binding domain AK38_RS12725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AK38_RS12730 PF01206 Sulfurtransferase TusA AK38_RS12735 PF04143 Sulphur transport AK38_RS12740 PF01312 FlhB HrpN YscU SpaS Family AK38_RS12745 PF01311 Bacterial export proteins, family 1 AK38_RS12750 PF01313 Bacterial export proteins, family 3 AK38_RS12755 PF00813 FliP family AK38_RS12760 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AK38_RS12775 PF18269 T3SS EscN ATPase C-terminal domain AK38_RS12775 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AK38_RS12780 PF00771 FHIPEP family AK38_RS12795 PF01514 Secretory protein of YscJ/FliF family AK38_RS12830 PF00263 Bacterial type II and III secretion system protein AK38_RS12830 PF03958 Bacterial type II/III secretion system short domain AK38_RS12835 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AK38_RS12835 PF00072 Response regulator receiver domain AK38_RS12835 PF01627 Hpt domain AK38_RS12835 PF00512 His Kinase A (phospho-acceptor) domain AK38_RS12835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AK38_RS12835 PF00672 HAMP domain AK38_RS12840 PF00196 Bacterial regulatory proteins, luxR family AK38_RS12840 PF00072 Response regulator receiver domain AK38_RS12845 PF00375 Sodium:dicarboxylate symporter family AK38_RS12850 PF00501 AMP-binding enzyme AK38_RS12850 PF16177 Acetyl-coenzyme A synthetase N-terminus AK38_RS12850 PF13193 AMP-binding enzyme C-terminal domain AK38_RS12855 PF04341 Protein of unknown function, DUF485 AK38_RS12860 PF00474 Sodium:solute symporter family AK38_RS12870 PF02796 Helix-turn-helix domain of resolvase AK38_RS12870 PF00665 Integrase core domain AK38_RS12875 PF01695 IstB-like ATP binding protein AK38_RS12880 PF00132 Bacterial transferase hexapeptide (six repeats) AK38_RS12885 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AK38_RS12885 PF08501 Shikimate dehydrogenase substrate binding domain AK38_RS12885 PF01488 Shikimate / quinate 5-dehydrogenase AK38_RS12890 PF01300 Telomere recombination AK38_RS12895 PF01396 Topoisomerase DNA binding C4 zinc finger AK38_RS12900 PF04361 Protein of unknown function (DUF494) AK38_RS12905 PF02481 DNA recombination-mediator protein A AK38_RS12905 PF17782 DprA winged helix domain AK38_RS12910 PF01327 Polypeptide deformylase AK38_RS12915 PF02911 Formyl transferase, C-terminal domain AK38_RS12915 PF00551 Formyl transferase AK38_RS12920 PF01029 NusB family AK38_RS12920 PF01189 16S rRNA methyltransferase RsmB/F AK38_RS12925 PF02254 TrkA-N domain AK38_RS12925 PF02080 TrkA-C domain AK38_RS12930 PF01741 Large-conductance mechanosensitive channel, MscL AK38_RS12935 PF03889 Alternative ribosome-rescue factor A AK38_RS12940 PF13411 MerR HTH family regulatory protein AK38_RS12945 PF01196 Ribosomal protein L17 AK38_RS12950 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AK38_RS12950 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AK38_RS12950 PF01000 RNA polymerase Rpb3/RpoA insert domain AK38_RS12955 PF00163 Ribosomal protein S4/S9 N-terminal domain AK38_RS12955 PF01479 S4 domain AK38_RS12960 PF00411 Ribosomal protein S11 AK38_RS12965 PF00416 Ribosomal protein S13/S18 AK38_RS12970 PF00444 Ribosomal protein L36 AK38_RS12975 PF00344 SecY translocase AK38_RS12980 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AK38_RS12985 PF00327 Ribosomal protein L30p/L7e AK38_RS12990 PF00333 Ribosomal protein S5, N-terminal domain AK38_RS12990 PF03719 Ribosomal protein S5, C-terminal domain AK38_RS12995 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AK38_RS13000 PF00347 Ribosomal protein L6 AK38_RS13005 PF00410 Ribosomal protein S8 AK38_RS13010 PF00253 Ribosomal protein S14p/S29e AK38_RS13015 PF00673 ribosomal L5P family C-terminus AK38_RS13015 PF00281 Ribosomal protein L5 AK38_RS13020 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AK38_RS13020 PF00467 KOW motif AK38_RS13025 PF00238 Ribosomal protein L14p/L23e AK38_RS13030 PF00366 Ribosomal protein S17 AK38_RS13035 PF00831 Ribosomal L29 protein AK38_RS13040 PF00252 Ribosomal protein L16p/L10e AK38_RS13045 PF00189 Ribosomal protein S3, C-terminal domain AK38_RS13045 PF07650 KH domain AK38_RS13050 PF00237 Ribosomal protein L22p/L17e AK38_RS13055 PF00203 Ribosomal protein S19 AK38_RS13060 PF00181 Ribosomal Proteins L2, RNA binding domain AK38_RS13060 PF03947 Ribosomal Proteins L2, C-terminal domain AK38_RS13065 PF00276 Ribosomal protein L23 AK38_RS13070 PF00573 Ribosomal protein L4/L1 family AK38_RS13075 PF00297 Ribosomal protein L3 AK38_RS13080 PF00338 Ribosomal protein S10p/S20e AK38_RS13085 PF00210 Ferritin-like domain AK38_RS13090 PF04324 BFD-like [2Fe-2S] binding domain AK38_RS13100 PF03143 Elongation factor Tu C-terminal domain AK38_RS13100 PF00009 Elongation factor Tu GTP binding domain AK38_RS13100 PF03144 Elongation factor Tu domain 2 AK38_RS13105 PF00679 Elongation factor G C-terminus AK38_RS13105 PF14492 Elongation Factor G, domain II AK38_RS13105 PF03764 Elongation factor G, domain IV AK38_RS13105 PF03144 Elongation factor Tu domain 2 AK38_RS13105 PF00009 Elongation factor Tu GTP binding domain AK38_RS13110 PF00177 Ribosomal protein S7p/S5e AK38_RS13115 PF00164 Ribosomal protein S12/S23 AK38_RS13120 PF04077 DsrH like protein AK38_RS13125 PF02635 DsrE/DsrF-like family AK38_RS13130 PF02635 DsrE/DsrF-like family AK38_RS13135 PF08348 YheO-like PAS domain AK38_RS13135 PF13309 HTH domain AK38_RS13140 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AK38_RS13140 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AK38_RS13145 PF04102 SlyX AK38_RS13150 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AK38_RS13155 PF09526 Probable metal-binding protein (DUF2387) AK38_RS13160 PF00999 Sodium/hydrogen exchanger family AK38_RS13160 PF02254 TrkA-N domain AK38_RS13165 PF02525 Flavodoxin-like fold AK38_RS13175 PF00535 Glycosyl transferase family 2 AK38_RS13185 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AK38_RS13190 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS13195 PF00005 ABC transporter AK38_RS13200 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AK38_RS13205 PF01810 LysE type translocator AK38_RS13210 PF00561 alpha/beta hydrolase fold AK38_RS13215 PF06794 Uncharacterised protein family (UPF0270) AK38_RS13220 PF00485 Phosphoribulokinase / Uridine kinase family AK38_RS13230 PF02566 OsmC-like protein AK38_RS13235 PF13545 Crp-like helix-turn-helix domain AK38_RS13235 PF00027 Cyclic nucleotide-binding domain AK38_RS13240 PF12805 FUSC-like inner membrane protein yccS AK38_RS13260 PF02796 Helix-turn-helix domain of resolvase AK38_RS13260 PF00665 Integrase core domain AK38_RS13270 PF00117 Glutamine amidotransferase class-I AK38_RS13275 PF05872 Bacterial protein of unknown function (DUF853) AK38_RS13280 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AK38_RS13285 PF11975 Family 4 glycosyl hydrolase C-terminal domain AK38_RS13285 PF02056 Family 4 glycosyl hydrolase AK38_RS13290 PF00356 Bacterial regulatory proteins, lacI family AK38_RS13300 PF07690 Major Facilitator Superfamily AK38_RS13305 PF07969 Amidohydrolase family AK38_RS13310 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AK38_RS13310 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AK38_RS13310 PF04324 BFD-like [2Fe-2S] binding domain AK38_RS13310 PF07992 Pyridine nucleotide-disulphide oxidoreductase AK38_RS13310 PF18267 Rubredoxin NAD+ reductase C-terminal domain AK38_RS13315 PF13806 Rieske-like [2Fe-2S] domain AK38_RS13320 PF01226 Formate/nitrite transporter AK38_RS13325 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AK38_RS13325 PF14824 Sirohaem biosynthesis protein central AK38_RS13325 PF10414 Sirohaem synthase dimerisation region AK38_RS13330 PF00579 tRNA synthetases class I (W and Y) AK38_RS13335 PF13419 Haloacid dehalogenase-like hydrolase AK38_RS13340 PF00834 Ribulose-phosphate 3 epimerase family AK38_RS13345 PF02086 D12 class N6 adenine-specific DNA methyltransferase AK38_RS13350 PF05036 Sporulation related domain AK38_RS13355 PF01761 3-dehydroquinate synthase AK38_RS13360 PF01202 Shikimate kinase AK38_RS13365 PF03958 Bacterial type II/III secretion system short domain AK38_RS13365 PF00263 Bacterial type II and III secretion system protein AK38_RS13395 PF00912 Transglycosylase AK38_RS13395 PF17092 Penicillin-binding protein OB-like domain AK38_RS13395 PF00905 Penicillin binding protein transpeptidase domain AK38_RS13400 PF00293 NUDIX domain AK38_RS13410 PF07095 Intracellular growth attenuator protein IgaA AK38_RS13415 PF13419 Haloacid dehalogenase-like hydrolase AK38_RS13420 PF01479 S4 domain AK38_RS13425 PF01430 Hsp33 protein AK38_RS13430 PF01293 Phosphoenolpyruvate carboxykinase AK38_RS13435 PF00512 His Kinase A (phospho-acceptor) domain AK38_RS13435 PF00672 HAMP domain AK38_RS13435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AK38_RS13440 PF00486 Transcriptional regulatory protein, C terminal AK38_RS13440 PF00072 Response regulator receiver domain AK38_RS13445 PF01272 Transcription elongation factor, GreA/GreB, C-term AK38_RS13445 PF03449 Transcription elongation factor, N-terminal AK38_RS13450 PF17674 HHH domain AK38_RS13450 PF16921 Tex protein YqgF-like domain AK38_RS13450 PF00575 S1 RNA binding domain AK38_RS13450 PF09371 Tex-like protein N-terminal domain AK38_RS13460 PF04023 FeoA domain AK38_RS13465 PF07670 Nucleoside recognition AK38_RS13465 PF17910 FeoB cytosolic helical domain AK38_RS13465 PF02421 Ferrous iron transport protein B AK38_RS13465 PF07664 Ferrous iron transport protein B C terminus AK38_RS13470 PF09012 FeoC like transcriptional regulator AK38_RS13475 PF07338 Protein of unknown function (DUF1471) AK38_RS13480 PF00561 alpha/beta hydrolase fold AK38_RS13485 PF00156 Phosphoribosyl transferase domain AK38_RS13490 PF01521 Iron-sulphur cluster biosynthesis AK38_RS13490 PF01106 NifU-like domain AK38_RS13505 PF00343 Carbohydrate phosphorylase AK38_RS13510 PF17874 MalT-like TPR region AK38_RS13510 PF00196 Bacterial regulatory proteins, luxR family AK38_RS13515 PF00581 Rhodanese-like domain AK38_RS13520 PF01694 Rhomboid family AK38_RS13520 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease AK38_RS13525 PF00455 DeoR C terminal sensor domain AK38_RS13525 PF08220 DeoR-like helix-turn-helix domain AK38_RS13540 PF02219 Methylenetetrahydrofolate reductase AK38_RS13545 PF03447 Homoserine dehydrogenase, NAD binding domain AK38_RS13545 PF00696 Amino acid kinase family AK38_RS13545 PF00742 Homoserine dehydrogenase AK38_RS13555 PF01340 Met Apo-repressor, MetJ AK38_RS13565 PF05360 yiaA/B two helix domain AK38_RS13570 PF01197 Ribosomal protein L31 AK38_RS13575 PF00271 Helicase conserved C-terminal domain AK38_RS13575 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AK38_RS13575 PF18074 Primosomal protein N C-terminal domain AK38_RS13575 PF17764 3′ DNA-binding domain (3′BD) AK38_RS13575 PF00270 DEAD/DEAH box helicase AK38_RS13585 PF00356 Bacterial regulatory proteins, lacI family AK38_RS13590 PF05036 Sporulation related domain AK38_RS13595 PF00227 Proteasome subunit AK38_RS13600 PF00004 ATPase family associated with various cellular activities (AAA) AK38_RS13600 PF07724 AAA domain (Cdc48 subfamily) AK38_RS13600 PF10431 C-terminal, D2-small domain, of ClpB protein AK38_RS13605 PF01040 UbiA prenyltransferase family AK38_RS13610 PF03737 Aldolase/RraA AK38_RS13630 PF00529 HlyD membrane-fusion protein of T1SS AK38_RS13630 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AK38_RS13640 PF02796 Helix-turn-helix domain of resolvase AK38_RS13640 PF00665 Integrase core domain AK38_RS13645 PF01695 IstB-like ATP binding protein AK38_RS13660 PF06005 Cell division protein ZapB AK38_RS13670 PF00230 Major intrinsic protein AK38_RS13685 PF00175 Oxidoreductase NAD-binding domain AK38_RS13685 PF00970 Oxidoreductase FAD-binding domain AK38_RS13690 PF05656 Protein of unknown function (DUF805) AK38_RS13695 PF07305 Protein of unknown function (DUF1454) AK38_RS13700 PF00121 Triosephosphate isomerase AK38_RS13705 PF03466 LysR substrate binding domain AK38_RS13705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AK38_RS13710 PF02585 GlcNAc-PI de-N-acetylase AK38_RS13715 PF03737 Aldolase/RraA AK38_RS13720 PF00939 Sodium:sulfate symporter transmembrane region AK38_RS13735 PF00365 Phosphofructokinase AK38_RS13740 PF01545 Cation efflux family AK38_RS13740 PF16916 Dimerisation domain of Zinc Transporter AK38_RS13745 PF04754 Putative transposase, YhgA-like AK38_RS13750 PF07813 LTXXQ motif family protein AK38_RS13755 PF00486 Transcriptional regulatory protein, C terminal AK38_RS13755 PF00072 Response regulator receiver domain AK38_RS13760 PF16527 Two-component sensor protein CpxA, periplasmic domain AK38_RS13760 PF00672 HAMP domain AK38_RS13760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AK38_RS13760 PF00512 His Kinase A (phospho-acceptor) domain AK38_RS13765 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AK38_RS13765 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AK38_RS13765 PF02805 Metal binding domain of Ada AK38_RS13765 PF12833 Helix-turn-helix domain AK38_RS13770 PF00588 SpoU rRNA Methylase family AK38_RS13775 PF00132 Bacterial transferase hexapeptide (six repeats) AK38_RS13775 PF06426 Serine acetyltransferase, N-terminal AK38_RS13785 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AK38_RS13785 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AK38_RS13790 PF02556 Preprotein translocase subunit SecB AK38_RS13795 PF00462 Glutaredoxin AK38_RS13800 PF00581 Rhodanese-like domain AK38_RS13805 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AK38_RS13805 PF01676 Metalloenzyme superfamily AK38_RS13810 PF01551 Peptidase family M23 AK38_RS13820 PF08240 Alcohol dehydrogenase GroES-like domain AK38_RS13820 PF00107 Zinc-binding dehydrogenase AK38_RS13825 PF00155 Aminotransferase class I and II AK38_RS13830 PF01370 NAD dependent epimerase/dehydratase family AK38_RS13835 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AK38_RS13840 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AK38_RS13845 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AK38_RS13850 PF00535 Glycosyl transferase family 2 AK38_RS13855 PF01467 Cytidylyltransferase-like AK38_RS13860 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AK38_RS13860 PF06827 Zinc finger found in FPG and IleRS AK38_RS13860 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AK38_RS13865 PF00471 Ribosomal protein L33 AK38_RS13870 PF00830 Ribosomal L28 family AK38_RS13875 PF04002 RadC-like JAB domain AK38_RS13880 PF04127 DNA / pantothenate metabolism flavoprotein AK38_RS13880 PF02441 Flavoprotein AK38_RS13885 PF00692 dUTPase AK38_RS13890 PF00440 Bacterial regulatory proteins, tetR family AK38_RS13895 PF00156 Phosphoribosyl transferase domain AK38_RS13900 PF01138 3' exoribonuclease family, domain 1 AK38_RS13900 PF03725 3' exoribonuclease family, domain 2 AK38_RS13905 PF08340 Domain of unknown function (DUF1732) AK38_RS13905 PF03755 YicC-like family, N-terminal region AK38_RS13910 PF03458 UPF0126 domain AK38_RS13915 PF01653 NAD-dependent DNA ligase adenylation domain AK38_RS13915 PF03120 NAD-dependent DNA ligase OB-fold domain AK38_RS13920 PF00625 Guanylate kinase AK38_RS13925 PF01192 RNA polymerase Rpb6 AK38_RS13930 PF04607 Region found in RelA / SpoT proteins AK38_RS13930 PF02824 TGS domain AK38_RS13930 PF13291 ACT domain AK38_RS13935 PF12105 SpoU, rRNA methylase, C-terminal AK38_RS13935 PF00588 SpoU rRNA Methylase family AK38_RS13940 PF00270 DEAD/DEAH box helicase AK38_RS13940 PF00271 Helicase conserved C-terminal domain AK38_RS13940 PF17191 RecG wedge domain AK38_RS13945 PF03616 Sodium/glutamate symporter AK38_RS13950 PF00860 Permease family AK38_RS13955 PF05170 AsmA family AK38_RS13960 PF00583 Acetyltransferase (GNAT) family AK38_RS13960 PF09500 Putative thioesterase (yiiD_Cterm) AK38_RS13965 PF00665 Integrase core domain AK38_RS13965 PF02796 Helix-turn-helix domain of resolvase AK38_RS13970 PF01695 IstB-like ATP binding protein AK38_RS13975 PF02580 D-Tyr-tRNA(Tyr) deacylase AK38_RS13980 PF03631 Virulence factor BrkB AK38_RS13985 PF13419 Haloacid dehalogenase-like hydrolase AK38_RS14000 PF00120 Glutamine synthetase, catalytic domain AK38_RS14000 PF03951 Glutamine synthetase, beta-Grasp domain AK38_RS14005 PF00512 His Kinase A (phospho-acceptor) domain AK38_RS14005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AK38_RS14005 PF00989 PAS fold AK38_RS14010 PF00158 Sigma-54 interaction domain AK38_RS14010 PF00072 Response regulator receiver domain AK38_RS14010 PF02954 Bacterial regulatory protein, Fis family AK38_RS14015 PF06969 HemN C-terminal domain AK38_RS14015 PF04055 Radical SAM superfamily AK38_RS14020 PF04220 Der GTPase activator (YihI) AK38_RS14025 PF01926 50S ribosome-binding GTPase AK38_RS14030 PF01797 Transposase IS200 like AK38_RS14040 PF01612 3'-5' exonuclease AK38_RS14040 PF01367 5'-3' exonuclease, C-terminal SAM fold AK38_RS14040 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AK38_RS14040 PF00476 DNA polymerase family A AK38_RS14045 PF01323 DSBA-like thioredoxin domain AK38_RS14050 PF01636 Phosphotransferase enzyme family AK38_RS14055 PF06288 Protein of unknown function (DUF1040) AK38_RS14060 PF12804 MobA-like NTP transferase domain AK38_RS14065 PF03205 Molybdopterin guanine dinucleotide synthesis protein B AK38_RS14070 PF00872 Transposase, Mutator family AK38_RS14100 PF07729 FCD domain AK38_RS14100 PF00392 Bacterial regulatory proteins, gntR family AK38_RS14105 PF07690 Major Facilitator Superfamily AK38_RS14115 PF00294 pfkB family carbohydrate kinase AK38_RS14120 PF05025 RbsD / FucU transport protein family AK38_RS14125 PF02705 K+ potassium transporter AK38_RS14130 PF12592 Protein of unknown function (DUF3763) AK38_RS14130 PF17868 AAA lid domain AK38_RS14130 PF07728 AAA domain (dynein-related subfamily) AK38_RS14135 PF05762 VWA domain containing CoxE-like protein AK38_RS14140 PF03590 Aspartate-ammonia ligase AK38_RS14145 PF01037 Lrp/AsnC ligand binding domain AK38_RS14150 PF00258 Flavodoxin AK38_RS14155 PF13932 GidA associated domain AK38_RS14155 PF01134 Glucose inhibited division protein A AK38_RS14160 PF02527 rRNA small subunit methyltransferase G AK38_RS14165 PF03899 ATP synthase I chain AK38_RS14170 PF00119 ATP synthase A chain AK38_RS14175 PF00137 ATP synthase subunit C AK38_RS14180 PF00430 ATP synthase B/B' CF(0) AK38_RS14185 PF00213 ATP synthase delta (OSCP) subunit AK38_RS14190 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AK38_RS14190 PF00306 ATP synthase alpha/beta chain, C terminal domain AK38_RS14190 PF02874 ATP synthase alpha/beta family, beta-barrel domain AK38_RS14195 PF00231 ATP synthase AK38_RS14200 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AK38_RS14200 PF02874 ATP synthase alpha/beta family, beta-barrel domain AK38_RS14205 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AK38_RS14205 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AK38_RS14210 PF00132 Bacterial transferase hexapeptide (six repeats) AK38_RS14210 PF12804 MobA-like NTP transferase domain AK38_RS14215 PF01380 SIS domain AK38_RS14220 PF12849 PBP superfamily domain AK38_RS14225 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS14230 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS14235 PF00005 ABC transporter AK38_RS14240 PF01895 PhoU domain AK38_RS14250 PF00497 Bacterial extracellular solute-binding proteins, family 3 AK38_RS14255 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS14260 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS14265 PF13419 Haloacid dehalogenase-like hydrolase AK38_RS14270 PF00860 Permease family AK38_RS14285 PF07055 Enoyl reductase FAD binding domain AK38_RS14285 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase AK38_RS14285 PF12241 Trans-2-enoyl-CoA reductase catalytic region AK38_RS14290 PF10396 GTP-binding protein TrmE N-terminus AK38_RS14290 PF01926 50S ribosome-binding GTPase AK38_RS14290 PF12631 MnmE helical domain AK38_RS14295 PF02096 60Kd inner membrane protein AK38_RS14295 PF14849 YidC periplasmic domain AK38_RS14300 PF00825 Ribonuclease P AK38_RS14305 PF00468 Ribosomal protein L34 AK38_RS14310 PF11638 DnaA N-terminal domain AK38_RS14310 PF00308 Bacterial dnaA protein AK38_RS14310 PF08299 Bacterial dnaA protein helix-turn-helix AK38_RS14315 PF02768 DNA polymerase III beta subunit, C-terminal domain AK38_RS14315 PF02767 DNA polymerase III beta subunit, central domain AK38_RS14315 PF00712 DNA polymerase III beta subunit, N-terminal domain AK38_RS14325 PF02463 RecF/RecN/SMC N terminal domain AK38_RS14330 PF00986 DNA gyrase B subunit, carboxyl terminus AK38_RS14330 PF01751 Toprim domain AK38_RS14330 PF18053 DNA gyrase B subunit insert domain AK38_RS14330 PF00204 DNA gyrase B AK38_RS14330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AK38_RS14350 PF02423 Ornithine cyclodeaminase/mu-crystallin family AK38_RS14355 PF00291 Pyridoxal-phosphate dependent enzyme AK38_RS14355 PF13291 ACT domain AK38_RS14370 PF07119 Protein of unknown function (DUF1375) AK38_RS14375 PF00011 Hsp20/alpha crystallin family AK38_RS14380 PF00011 Hsp20/alpha crystallin family AK38_RS14385 PF06826 Predicted Permease Membrane Region AK38_RS14385 PF02080 TrkA-C domain AK38_RS14390 PF00155 Aminotransferase class I and II AK38_RS14400 PF00128 Alpha amylase, catalytic domain AK38_RS14405 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AK38_RS14405 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AK38_RS14415 PF13488 Glycine zipper AK38_RS14415 PF00691 OmpA family AK38_RS14425 PF03352 Methyladenine glycosylase AK38_RS14430 PF02091 Glycyl-tRNA synthetase alpha subunit AK38_RS14435 PF05746 DALR anticodon binding domain AK38_RS14435 PF02092 Glycyl-tRNA synthetase beta subunit AK38_RS14440 PF11254 Protein of unknown function (DUF3053) AK38_RS14445 PF02378 Phosphotransferase system, EIIC AK38_RS14445 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AK38_RS14445 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AK38_RS14450 PF08125 Mannitol dehydrogenase C-terminal domain AK38_RS14450 PF01232 Mannitol dehydrogenase Rossmann domain AK38_RS14455 PF05068 Mannitol repressor AK38_RS14460 PF10928 Protein of unknown function (DUF2810) AK38_RS14475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AK38_RS14475 PF02203 Tar ligand binding domain homologue AK38_RS14475 PF00672 HAMP domain AK38_RS14480 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AK38_RS14480 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AK38_RS14485 PF02634 FdhD/NarQ family AK38_RS14500 PF13247 4Fe-4S dicluster domain AK38_RS14500 PF09163 Formate dehydrogenase N, transmembrane AK38_RS14505 PF01292 Prokaryotic cytochrome b561 AK38_RS14510 PF04216 Protein involved in formate dehydrogenase formation AK38_RS14515 PF12390 Selenocysteine synthase N terminal AK38_RS14515 PF03841 L-seryl-tRNA selenium transferase AK38_RS14520 PF00009 Elongation factor Tu GTP binding domain AK38_RS14520 PF03144 Elongation factor Tu domain 2 AK38_RS14520 PF09107 Elongation factor SelB, winged helix AK38_RS14520 PF09106 Elongation factor SelB, winged helix AK38_RS14525 PF00009 Elongation factor Tu GTP binding domain AK38_RS14525 PF03144 Elongation factor Tu domain 2 AK38_RS14525 PF09106 Elongation factor SelB, winged helix AK38_RS14525 PF09107 Elongation factor SelB, winged helix AK38_RS14555 PF07690 Major Facilitator Superfamily AK38_RS14575 PF01757 Acyltransferase family AK38_RS14580 PF00419 Fimbrial protein AK38_RS14590 PF02753 Pili assembly chaperone PapD, C-terminal domain AK38_RS14590 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AK38_RS14600 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AK38_RS14600 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AK38_RS14610 PF13407 Periplasmic binding protein domain AK38_RS14615 PF00005 ABC transporter AK38_RS14620 PF02653 Branched-chain amino acid transport system / permease component AK38_RS14625 PF12833 Helix-turn-helix domain AK38_RS14630 PF00589 Phage integrase family AK38_RS14630 PF14659 Phage integrase, N-terminal SAM-like domain AK38_RS14630 PF13356 Arm DNA-binding domain AK38_RS14640 PF04606 Ogr/Delta-like zinc finger AK38_RS14670 PF00005 ABC transporter AK38_RS14675 PF01032 FecCD transport family AK38_RS14680 PF01032 FecCD transport family AK38_RS14685 PF01497 Periplasmic binding protein AK38_RS14700 PF00156 Phosphoribosyl transferase domain AK38_RS14705 PF00291 Pyridoxal-phosphate dependent enzyme AK38_RS14710 PF17391 Urocanase N-terminal domain AK38_RS14710 PF17392 Urocanase C-terminal domain AK38_RS14710 PF01175 Urocanase Rossmann-like domain AK38_RS14715 PF00221 Aromatic amino acid lyase AK38_RS14720 PF00324 Amino acid permease AK38_RS14725 PF12146 Serine aminopeptidase, S33 AK38_RS14730 PF08019 Phosphoethanolamine transferase EptA/EptB AK38_RS14730 PF00884 Sulfatase AK38_RS14735 PF00072 Response regulator receiver domain AK38_RS14735 PF00196 Bacterial regulatory proteins, luxR family AK38_RS14745 PF02796 Helix-turn-helix domain of resolvase AK38_RS14745 PF00665 Integrase core domain AK38_RS14750 PF01695 IstB-like ATP binding protein AK38_RS14755 PF07730 Histidine kinase AK38_RS14755 PF05231 MASE1 AK38_RS14755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AK38_RS14760 PF07690 Major Facilitator Superfamily AK38_RS14770 PF04829 Pre-toxin domain with VENN motif AK38_RS14770 PF05860 haemagglutination activity domain AK38_RS14770 PF13332 Hemagglutinin repeat AK38_RS14770 PF05594 Haemagluttinin repeat AK38_RS14775 PF08479 POTRA domain, ShlB-type AK38_RS14775 PF17287 POTRA domain AK38_RS14775 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AK38_RS14785 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AK38_RS14790 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS14795 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS14795 PF12911 N-terminal TM domain of oligopeptide transport permease C AK38_RS14800 PF00005 ABC transporter AK38_RS14800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AK38_RS14805 PF00005 ABC transporter AK38_RS14805 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AK38_RS14810 PF01270 Glycosyl hydrolases family 8 AK38_RS14815 PF00672 HAMP domain AK38_RS14815 PF00990 Diguanylate cyclase, GGDEF domain AK38_RS14815 PF00563 EAL domain AK38_RS14815 PF17154 Gammaproteobacterial periplasmic sensor domain AK38_RS14820 PF06178 Oligogalacturonate-specific porin protein (KdgM) AK38_RS14825 PF06917 Periplasmic pectate lyase AK38_RS14835 PF00375 Sodium:dicarboxylate symporter family AK38_RS14840 PF00675 Insulinase (Peptidase family M16) AK38_RS14840 PF05193 Peptidase M16 inactive domain AK38_RS14845 PF00294 pfkB family carbohydrate kinase AK38_RS14850 PF01361 Tautomerase enzyme AK38_RS14855 PF00563 EAL domain AK38_RS14860 PF05170 AsmA family AK38_RS14865 PF02611 CDP-diacylglycerol pyrophosphatase AK38_RS14870 PF03631 Virulence factor BrkB AK38_RS14895 PF02595 Glycerate kinase family AK38_RS14900 PF02447 GntP family permease AK38_RS14905 PF05651 Putative sugar diacid recognition AK38_RS14905 PF17853 GGDEF-like domain AK38_RS14905 PF13556 PucR C-terminal helix-turn-helix domain AK38_RS14910 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AK38_RS14910 PF07992 Pyridine nucleotide-disulphide oxidoreductase AK38_RS14915 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AK38_RS14920 PF01432 Peptidase family M3 AK38_RS14925 PF04445 Putative SAM-dependent methyltransferase AK38_RS14930 PF00413 Matrixin AK38_RS14930 PF08548 Peptidase M10 serralysin C terminal AK38_RS14930 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AK38_RS14935 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AK38_RS14935 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AK38_RS14940 PF00582 Universal stress protein family AK38_RS14945 PF10625 Universal stress protein B (UspB) AK38_RS14960 PF01384 Phosphate transporter family AK38_RS14970 PF00512 His Kinase A (phospho-acceptor) domain AK38_RS14970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AK38_RS14970 PF13188 PAS domain AK38_RS14970 PF08448 PAS fold AK38_RS14970 PF00072 Response regulator receiver domain AK38_RS14975 PF00005 ABC transporter AK38_RS14980 PF02653 Branched-chain amino acid transport system / permease component AK38_RS14985 PF13407 Periplasmic binding protein domain AK38_RS14995 PF01116 Fructose-bisphosphate aldolase class-II AK38_RS15005 PF00072 Response regulator receiver domain AK38_RS15005 PF00486 Transcriptional regulatory protein, C terminal AK38_RS15015 PF02678 Pirin AK38_RS15015 PF17954 Quercetinase C-terminal cupin domain AK38_RS15020 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AK38_RS15020 PF00356 Bacterial regulatory proteins, lacI family AK38_RS15025 PF02447 GntP family permease AK38_RS15030 PF01202 Shikimate kinase AK38_RS15050 PF01914 MarC family integral membrane protein AK38_RS15055 PF01118 Semialdehyde dehydrogenase, NAD binding domain AK38_RS15055 PF02774 Semialdehyde dehydrogenase, dimerisation domain AK38_RS15080 PF02369 Bacterial Ig-like domain (group 1) AK38_RS15080 PF11924 Inverse autotransporter, beta-domain AK38_RS15080 PF07979 Intimin C-type lectin domain AK38_RS15080 PF09134 Invasin, domain 3 AK38_RS15085 PF07694 5TMR of 5TMR-LYT AK38_RS15085 PF06580 Histidine kinase AK38_RS15090 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AK38_RS15090 PF02806 Alpha amylase, C-terminal all-beta domain AK38_RS15090 PF00128 Alpha amylase, catalytic domain AK38_RS15095 PF00128 Alpha amylase, catalytic domain AK38_RS15095 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AK38_RS15095 PF18390 Glycogen debranching enzyme C-terminal domain AK38_RS15105 PF00534 Glycosyl transferases group 1 AK38_RS15105 PF08323 Starch synthase catalytic domain AK38_RS15110 PF00343 Carbohydrate phosphorylase AK38_RS15115 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AK38_RS15115 PF01266 FAD dependent oxidoreductase AK38_RS15145 PF00665 Integrase core domain AK38_RS15145 PF02796 Helix-turn-helix domain of resolvase AK38_RS15150 PF01695 IstB-like ATP binding protein AK38_RS15155 PF00311 Phosphoenolpyruvate carboxylase AK38_RS15160 PF07687 Peptidase dimerisation domain AK38_RS15160 PF01546 Peptidase family M20/M25/M40 AK38_RS15165 PF01118 Semialdehyde dehydrogenase, NAD binding domain AK38_RS15165 PF02774 Semialdehyde dehydrogenase, dimerisation domain AK38_RS15170 PF00696 Amino acid kinase family AK38_RS15175 PF00206 Lyase AK38_RS15175 PF14698 Argininosuccinate lyase C-terminal AK38_RS15185 PF00593 TonB dependent receptor AK38_RS15185 PF07715 TonB-dependent Receptor Plug Domain AK38_RS15195 PF00664 ABC transporter transmembrane region AK38_RS15195 PF00005 ABC transporter AK38_RS15200 PF00529 HlyD membrane-fusion protein of T1SS AK38_RS15205 PF03544 Gram-negative bacterial TonB protein C-terminal AK38_RS15210 PF07992 Pyridine nucleotide-disulphide oxidoreductase AK38_RS15210 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AK38_RS15215 PF08534 Redoxin AK38_RS15215 PF00462 Glutaredoxin AK38_RS15220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AK38_RS15220 PF03466 LysR substrate binding domain AK38_RS15225 PF07992 Pyridine nucleotide-disulphide oxidoreductase AK38_RS15225 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AK38_RS15230 PF00440 Bacterial regulatory proteins, tetR family AK38_RS15235 PF07226 Protein of unknown function (DUF1422) AK38_RS15240 PF05958 tRNA (Uracil-5-)-methyltransferase AK38_RS15245 PF07715 TonB-dependent Receptor Plug Domain AK38_RS15245 PF00593 TonB dependent receptor AK38_RS15250 PF01177 Asp/Glu/Hydantoin racemase AK38_RS15290 PF13407 Periplasmic binding protein domain AK38_RS15295 PF00005 ABC transporter AK38_RS15300 PF02653 Branched-chain amino acid transport system / permease component AK38_RS15305 PF02653 Branched-chain amino acid transport system / permease component AK38_RS15310 PF03466 LysR substrate binding domain AK38_RS15310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AK38_RS15315 PF04219 Protein of unknown function, DUF AK38_RS15320 PF01078 Magnesium chelatase, subunit ChlI AK38_RS15320 PF13335 Magnesium chelatase, subunit ChlI C-terminal AK38_RS15325 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AK38_RS15325 PF00205 Thiamine pyrophosphate enzyme, central domain AK38_RS15325 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AK38_RS15335 PF01063 Amino-transferase class IV AK38_RS15340 PF00920 Dehydratase family AK38_RS15345 PF00291 Pyridoxal-phosphate dependent enzyme AK38_RS15345 PF00585 C-terminal regulatory domain of Threonine dehydratase AK38_RS15380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AK38_RS15380 PF03466 LysR substrate binding domain AK38_RS15385 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AK38_RS15385 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AK38_RS15410 PF01320 Colicin immunity protein / pyocin immunity protein AK38_RS15420 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AK38_RS15420 PF02753 Pili assembly chaperone PapD, C-terminal domain AK38_RS15430 PF13954 PapC N-terminal domain AK38_RS15430 PF00577 Outer membrane usher protein AK38_RS15430 PF13953 PapC C-terminal domain AK38_RS15435 PF02753 Pili assembly chaperone PapD, C-terminal domain AK38_RS15435 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AK38_RS15450 PF00872 Transposase, Mutator family AK38_RS15470 PF00580 UvrD/REP helicase N-terminal domain AK38_RS15470 PF13361 UvrD-like helicase C-terminal domain AK38_RS15485 PF00270 DEAD/DEAH box helicase AK38_RS15485 PF00271 Helicase conserved C-terminal domain AK38_RS15490 PF00085 Thioredoxin AK38_RS15495 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AK38_RS15495 PF07497 Rho termination factor, RNA-binding domain AK38_RS15495 PF07498 Rho termination factor, N-terminal domain AK38_RS15500 PF00953 Glycosyl transferase family 4 AK38_RS15505 PF02706 Chain length determinant protein AK38_RS15510 PF02350 UDP-N-acetylglucosamine 2-epimerase AK38_RS15515 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AK38_RS15515 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AK38_RS15515 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AK38_RS15520 PF16363 GDP-mannose 4,6 dehydratase AK38_RS15525 PF00483 Nucleotidyl transferase AK38_RS15535 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AK38_RS15540 PF01943 Polysaccharide biosynthesis protein AK38_RS15545 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 AK38_RS15550 PF06899 WzyE protein, O-antigen assembly polymerase AK38_RS15555 PF03808 Glycosyl transferase WecB/TagA/CpsF family AK38_RS15560 PF00324 Amino acid permease AK38_RS15590 PF07219 HemY protein N-terminus AK38_RS15590 PF07719 Tetratricopeptide repeat AK38_RS15595 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase AK38_RS15600 PF02602 Uroporphyrinogen-III synthase HemD AK38_RS15605 PF03900 Porphobilinogen deaminase, C-terminal domain AK38_RS15605 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AK38_RS15610 PF12633 Adenylate cyclase NT domain AK38_RS15610 PF01295 Adenylate cyclase, class-I AK38_RS15615 PF01491 Frataxin-like domain AK38_RS15620 PF13627 Prokaryotic lipoprotein-attachment site AK38_RS15625 PF01678 Diaminopimelate epimerase AK38_RS15630 PF04340 Protein of unknown function, DUF484 AK38_RS15635 PF02899 Phage integrase, N-terminal SAM-like domain AK38_RS15635 PF00589 Phage integrase family AK38_RS15640 PF13419 Haloacid dehalogenase-like hydrolase AK38_RS15645 PF13361 UvrD-like helicase C-terminal domain AK38_RS15645 PF00580 UvrD/REP helicase N-terminal domain AK38_RS15660 PF09370 Phosphoenolpyruvate hydrolase-like AK38_RS15665 PF01544 CorA-like Mg2+ transporter protein AK38_RS15670 PF00892 EamA-like transporter family AK38_RS15675 PF03061 Thioesterase superfamily AK38_RS15680 PF02253 Phospholipase A1 AK38_RS15685 PF00270 DEAD/DEAH box helicase AK38_RS15685 PF09382 RQC domain AK38_RS15685 PF00570 HRDC domain AK38_RS15685 PF00271 Helicase conserved C-terminal domain AK38_RS15685 PF16124 RecQ zinc-binding AK38_RS15690 PF01810 LysE type translocator AK38_RS15695 PF01810 LysE type translocator AK38_RS15700 PF12146 Serine aminopeptidase, S33 AK38_RS15715 PF03009 Glycerophosphoryl diester phosphodiesterase family AK38_RS15725 PF01266 FAD dependent oxidoreductase AK38_RS15725 PF04324 BFD-like [2Fe-2S] binding domain AK38_RS15730 PF00890 FAD binding domain AK38_RS15735 PF13183 4Fe-4S dicluster domain AK38_RS15735 PF02754 Cysteine-rich domain AK38_RS15740 PF08786 DcrB AK38_RS15745 PF02592 Putative vitamin uptake transporter AK38_RS15750 PF01206 Sulfurtransferase TusA AK38_RS15755 PF00403 Heavy-metal-associated domain AK38_RS15760 PF07947 YhhN family AK38_RS15775 PF06611 Protein of unknown function (DUF1145) AK38_RS15795 PF00005 ABC transporter AK38_RS15800 PF02687 FtsX-like permease family AK38_RS15800 PF18075 FtsX extracellular domain AK38_RS15805 PF04545 Sigma-70, region 4 AK38_RS15805 PF04542 Sigma-70 region 2 AK38_RS15805 PF00140 Sigma-70 factor, region 1.2 AK38_RS15815 PF01797 Transposase IS200 like AK38_RS15820 PF12568 Acetyltransferase (GNAT) domain, PanZ AK38_RS15825 PF13458 Periplasmic binding protein AK38_RS15830 PF02653 Branched-chain amino acid transport system / permease component AK38_RS15835 PF02653 Branched-chain amino acid transport system / permease component AK38_RS15835 PF11862 Domain of unknown function (DUF3382) AK38_RS15840 PF00005 ABC transporter AK38_RS15840 PF12399 Branched-chain amino acid ATP-binding cassette transporter AK38_RS15845 PF00005 ABC transporter AK38_RS15885 PF13416 Bacterial extracellular solute-binding protein AK38_RS15890 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS15895 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS15900 PF00005 ABC transporter AK38_RS15900 PF17912 MalK OB fold domain AK38_RS15905 PF03009 Glycerophosphoryl diester phosphodiesterase family AK38_RS15910 PF03547 Membrane transport protein AK38_RS15915 PF00892 EamA-like transporter family AK38_RS15920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AK38_RS15920 PF03466 LysR substrate binding domain AK38_RS15925 PF01717 Cobalamin-independent synthase, Catalytic domain AK38_RS15925 PF08267 Cobalamin-independent synthase, N-terminal domain AK38_RS15930 PF01738 Dienelactone hydrolase family AK38_RS15935 PF01048 Phosphorylase superfamily AK38_RS15945 PF02554 Carbon starvation protein CstA AK38_RS15945 PF13722 5TM C-terminal transporter carbon starvation CstA AK38_RS15950 PF09335 SNARE associated Golgi protein AK38_RS15955 PF02646 RmuC family AK38_RS15960 PF01209 ubiE/COQ5 methyltransferase family AK38_RS15965 PF02036 SCP-2 sterol transfer family AK38_RS15970 PF03109 ABC1 family AK38_RS15975 PF02416 mttA/Hcf106 family AK38_RS15985 PF00902 Sec-independent protein translocase protein (TatC) AK38_RS15995 PF00665 Integrase core domain AK38_RS15995 PF02796 Helix-turn-helix domain of resolvase AK38_RS16000 PF01695 IstB-like ATP binding protein AK38_RS16005 PF01026 TatD related DNase AK38_RS16010 PF00490 Delta-aminolevulinic acid dehydratase AK38_RS16015 PF02357 Transcription termination factor nusG AK38_RS16020 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AK38_RS16025 PF00175 Oxidoreductase NAD-binding domain AK38_RS16025 PF00970 Oxidoreductase FAD-binding domain AK38_RS16030 PF00108 Thiolase, N-terminal domain AK38_RS16030 PF02803 Thiolase, C-terminal domain AK38_RS16035 PF00378 Enoyl-CoA hydratase/isomerase AK38_RS16035 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AK38_RS16035 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AK38_RS16040 PF00557 Metallopeptidase family M24 AK38_RS16045 PF09186 Domain of unknown function (DUF1949) AK38_RS16045 PF01205 Uncharacterized protein family UPF0029 AK38_RS16060 PF02386 Cation transport protein AK38_RS16065 PF12724 Flavodoxin domain AK38_RS16095 PF01565 FAD binding domain AK38_RS16095 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AK38_RS16100 PF02237 Biotin protein ligase C terminal domain AK38_RS16100 PF08279 HTH domain AK38_RS16100 PF03099 Biotin/lipoate A/B protein ligase family AK38_RS16105 PF00485 Phosphoribulokinase / Uridine kinase family AK38_RS16110 PF13673 Acetyltransferase (GNAT) domain AK38_RS16115 PF00665 Integrase core domain AK38_RS16115 PF02796 Helix-turn-helix domain of resolvase AK38_RS16120 PF01695 IstB-like ATP binding protein AK38_RS16145 PF03144 Elongation factor Tu domain 2 AK38_RS16145 PF03143 Elongation factor Tu C-terminal domain AK38_RS16145 PF00009 Elongation factor Tu GTP binding domain AK38_RS16150 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AK38_RS16155 PF02357 Transcription termination factor nusG AK38_RS16155 PF00467 KOW motif AK38_RS16160 PF00298 Ribosomal protein L11, RNA binding domain AK38_RS16160 PF03946 Ribosomal protein L11, N-terminal domain AK38_RS16165 PF00687 Ribosomal protein L1p/L10e family AK38_RS16170 PF00466 Ribosomal protein L10 AK38_RS16175 PF16320 Ribosomal protein L7/L12 dimerisation domain AK38_RS16175 PF00542 Ribosomal protein L7/L12 C-terminal domain AK38_RS16180 PF04565 RNA polymerase Rpb2, domain 3 AK38_RS16180 PF04561 RNA polymerase Rpb2, domain 2 AK38_RS16180 PF04563 RNA polymerase beta subunit AK38_RS16180 PF04560 RNA polymerase Rpb2, domain 7 AK38_RS16180 PF00562 RNA polymerase Rpb2, domain 6 AK38_RS16180 PF10385 RNA polymerase beta subunit external 1 domain AK38_RS16185 PF04983 RNA polymerase Rpb1, domain 3 AK38_RS16185 PF04998 RNA polymerase Rpb1, domain 5 AK38_RS16185 PF04997 RNA polymerase Rpb1, domain 1 AK38_RS16185 PF05000 RNA polymerase Rpb1, domain 4 AK38_RS16185 PF00623 RNA polymerase Rpb1, domain 2 AK38_RS16190 PF01797 Transposase IS200 like AK38_RS16205 PF04055 Radical SAM superfamily AK38_RS16205 PF06968 Biotin and Thiamin Synthesis associated domain AK38_RS16210 PF05690 Thiazole biosynthesis protein ThiG AK38_RS16220 PF00899 ThiF family AK38_RS16225 PF02581 Thiamine monophosphate synthase AK38_RS16230 PF13667 ThiC-associated domain AK38_RS16230 PF01964 Radical SAM ThiC family AK38_RS16235 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ AK38_RS16240 PF00293 NUDIX domain AK38_RS16240 PF09297 NADH pyrophosphatase zinc ribbon domain AK38_RS16250 PF01208 Uroporphyrinogen decarboxylase (URO-D) AK38_RS16255 PF04493 Endonuclease V AK38_RS16260 PF04222 Protein of unknown function (DUF416) AK38_RS16265 PF00216 Bacterial DNA-binding protein AK38_RS16270 PF07356 Protein of unknown function (DUF1481) AK38_RS16275 PF02843 Phosphoribosylglycinamide synthetase, C domain AK38_RS16275 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AK38_RS16275 PF02844 Phosphoribosylglycinamide synthetase, N domain AK38_RS16280 PF01808 AICARFT/IMPCHase bienzyme AK38_RS16280 PF02142 MGS-like domain AK38_RS16330 PF04204 Homoserine O-succinyltransferase AK38_RS16335 PF01274 Malate synthase AK38_RS16340 PF00463 Isocitrate lyase family AK38_RS16345 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) AK38_RS16360 PF02965 Vitamin B12 dependent methionine synthase, activation domain AK38_RS16360 PF02574 Homocysteine S-methyltransferase AK38_RS16360 PF02607 B12 binding domain AK38_RS16360 PF02310 B12 binding domain AK38_RS16360 PF00809 Pterin binding enzyme AK38_RS16365 PF05860 haemagglutination activity domain AK38_RS16365 PF13332 Hemagglutinin repeat AK38_RS16370 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AK38_RS16370 PF17287 POTRA domain AK38_RS16370 PF08479 POTRA domain, ShlB-type AK38_RS16375 PF01842 ACT domain AK38_RS16375 PF00696 Amino acid kinase family AK38_RS16380 PF00342 Phosphoglucose isomerase AK38_RS16385 PF06146 Phosphate-starvation-inducible E AK38_RS16390 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS16395 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS16395 PF14785 Maltose transport system permease protein MalF P2 domain AK38_RS16400 PF01547 Bacterial extracellular solute-binding protein AK38_RS16410 PF17912 MalK OB fold domain AK38_RS16410 PF00005 ABC transporter AK38_RS16415 PF02264 LamB porin AK38_RS16420 PF07148 Maltose operon periplasmic protein precursor (MalM) AK38_RS16430 PF05638 Type VI secretion system effector, Hcp AK38_RS16465 PF00665 Integrase core domain AK38_RS16465 PF02796 Helix-turn-helix domain of resolvase AK38_RS16470 PF01695 IstB-like ATP binding protein AK38_RS16480 PF00356 Bacterial regulatory proteins, lacI family AK38_RS16485 PF00367 phosphotransferase system, EIIB AK38_RS16485 PF02378 Phosphotransferase system, EIIC AK38_RS16490 PF00128 Alpha amylase, catalytic domain AK38_RS16490 PF11941 Domain of unknown function (DUF3459) AK38_RS16495 PF14760 Rnk N-terminus AK38_RS16495 PF01272 Transcription elongation factor, GreA/GreB, C-term AK38_RS16500 PF07361 Cytochrome b562 AK38_RS16510 PF01523 Putative modulator of DNA gyrase AK38_RS16515 PF04751 Protein of unknown function (DUF615) AK38_RS16520 PF01337 Barstar (barnase inhibitor) AK38_RS16540 PF04632 Fusaric acid resistance protein family AK38_RS16545 PF13533 Biotin-lipoyl like AK38_RS16550 PF07869 Protein of unknown function (DUF1656) AK38_RS16555 PF03466 LysR substrate binding domain AK38_RS16555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AK38_RS16560 PF03466 LysR substrate binding domain AK38_RS16560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AK38_RS16575 PF18413 Neuraminidase-like domain AK38_RS16575 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain AK38_RS16580 PF03534 Salmonella virulence plasmid 65kDa B protein AK38_RS16580 PF12255 Insecticide toxin TcdB middle/C-terminal region AK38_RS16580 PF12256 Insecticide toxin TcdB middle/N-terminal region AK38_RS16600 PF18807 Tripartite Tc toxins repeat AK38_RS16600 PF05785 Rho-activating domain of cytotoxic necrotizing factor AK38_RS16605 PF14431 YwqJ-like deaminase AK38_RS16605 PF18807 Tripartite Tc toxins repeat AK38_RS16610 PF01523 Putative modulator of DNA gyrase AK38_RS16615 PF00795 Carbon-nitrogen hydrolase AK38_RS16620 PF13502 AsmA-like C-terminal region AK38_RS16620 PF13116 Protein of unknown function AK38_RS16625 PF00575 S1 RNA binding domain AK38_RS16625 PF10150 Ribonuclease E/G family AK38_RS16630 PF02545 Maf-like protein AK38_RS16635 PF04093 rod shape-determining protein MreD AK38_RS16640 PF04085 rod shape-determining protein MreC AK38_RS16650 PF17157 Gammaproteobacterial periplasmic sensor domain AK38_RS16650 PF00990 Diguanylate cyclase, GGDEF domain AK38_RS16650 PF00563 EAL domain AK38_RS16655 PF08240 Alcohol dehydrogenase GroES-like domain AK38_RS16655 PF00107 Zinc-binding dehydrogenase AK38_RS16660 PF00174 Oxidoreductase molybdopterin binding domain AK38_RS16665 PF01794 Ferric reductase like transmembrane component AK38_RS16670 PF01220 Dehydroquinase class II AK38_RS16675 PF00364 Biotin-requiring enzyme AK38_RS16680 PF00289 Biotin carboxylase, N-terminal domain AK38_RS16680 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AK38_RS16680 PF02785 Biotin carboxylase C-terminal domain AK38_RS16685 PF06196 Protein of unknown function (DUF997) AK38_RS16690 PF00474 Sodium:solute symporter family AK38_RS16700 PF01207 Dihydrouridine synthase (Dus) AK38_RS16705 PF02954 Bacterial regulatory protein, Fis family AK38_RS16720 PF07690 Major Facilitator Superfamily AK38_RS16725 PF02627 Carboxymuconolactone decarboxylase family AK38_RS16730 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AK38_RS16730 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AK38_RS16735 PF00753 Metallo-beta-lactamase superfamily AK38_RS16740 PF05433 Glycine zipper 2TM domain AK38_RS16750 PF00313 'Cold-shock' DNA-binding domain AK38_RS16755 PF00313 'Cold-shock' DNA-binding domain AK38_RS16780 PF02798 Glutathione S-transferase, N-terminal domain AK38_RS16785 PF01380 SIS domain AK38_RS16785 PF00571 CBS domain AK38_RS16790 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AK38_RS16790 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AK38_RS16800 PF02653 Branched-chain amino acid transport system / permease component AK38_RS16805 PF00005 ABC transporter AK38_RS16815 PF03279 Bacterial lipid A biosynthesis acyltransferase AK38_RS16825 PF00999 Sodium/hydrogen exchanger family AK38_RS16830 PF00860 Permease family AK38_RS16835 PF04221 RelB antitoxin AK38_RS16840 PF00005 ABC transporter AK38_RS16845 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS16850 PF00296 Luciferase-like monooxygenase AK38_RS16855 PF09084 NMT1/THI5 like AK38_RS16860 PF03358 NADPH-dependent FMN reductase AK38_RS16865 PF01791 DeoC/LacD family aldolase AK38_RS16870 PF00294 pfkB family carbohydrate kinase AK38_RS16875 PF05025 RbsD / FucU transport protein family AK38_RS16880 PF12833 Helix-turn-helix domain AK38_RS16880 PF02311 AraC-like ligand binding domain AK38_RS16885 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AK38_RS16885 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AK38_RS16900 PF05593 RHS Repeat AK38_RS16900 PF03527 RHS protein AK38_RS16910 PF04717 Type VI secretion system, phage-baseplate injector AK38_RS16935 PF05593 RHS Repeat AK38_RS16935 PF14220 Domain of unknown function (DUF4329) AK38_RS16935 PF03527 RHS protein AK38_RS16950 PF04717 Type VI secretion system, phage-baseplate injector AK38_RS16985 PF07724 AAA domain (Cdc48 subfamily) AK38_RS16985 PF17871 AAA lid domain AK38_RS16985 PF00004 ATPase family associated with various cellular activities (AAA) AK38_RS16985 PF10431 C-terminal, D2-small domain, of ClpB protein AK38_RS17020 PF01695 IstB-like ATP binding protein AK38_RS17025 PF00665 Integrase core domain AK38_RS17025 PF02796 Helix-turn-helix domain of resolvase AK38_RS17030 PF01042 Endoribonuclease L-PSP AK38_RS17035 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain AK38_RS17035 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain AK38_RS17040 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AK38_RS17040 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AK38_RS17045 PF00381 PTS HPr component phosphorylation site AK38_RS17050 PF03668 P-loop ATPase protein family AK38_RS17055 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AK38_RS17065 PF04552 Sigma-54, DNA binding domain AK38_RS17065 PF00309 Sigma-54 factor, Activator interacting domain (AID) AK38_RS17065 PF04963 Sigma-54 factor, core binding domain AK38_RS17070 PF12399 Branched-chain amino acid ATP-binding cassette transporter AK38_RS17070 PF00005 ABC transporter AK38_RS17075 PF03968 OstA-like protein AK38_RS17080 PF06835 Lipopolysaccharide-assembly, LptC-related AK38_RS17090 PF00571 CBS domain AK38_RS17090 PF01380 SIS domain AK38_RS17095 PF01699 Sodium/calcium exchanger protein AK38_RS17100 PF00005 ABC transporter AK38_RS17105 PF02405 Permease MlaE AK38_RS17110 PF02470 MlaD protein AK38_RS17115 PF05494 MlaC protein AK38_RS17120 PF13466 STAS domain AK38_RS17125 PF01722 BolA-like protein AK38_RS17130 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AK38_RS17135 PF13180 PDZ domain AK38_RS17145 PF00595 PDZ domain AK38_RS17145 PF13180 PDZ domain AK38_RS17150 PF06295 Protein of unknown function (DUF1043) AK38_RS17155 PF03969 AFG1-like ATPase AK38_RS17160 PF00572 Ribosomal protein L13 AK38_RS17165 PF00380 Ribosomal protein S9/S16 AK38_RS17175 PF02798 Glutathione S-transferase, N-terminal domain AK38_RS17175 PF00043 Glutathione S-transferase, C-terminal domain AK38_RS17180 PF04386 Stringent starvation protein B AK38_RS17190 PF07992 Pyridine nucleotide-disulphide oxidoreductase AK38_RS17190 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AK38_RS17195 PF01493 GXGXG motif AK38_RS17195 PF01645 Conserved region in glutamate synthase AK38_RS17195 PF00310 Glutamine amidotransferases class-II AK38_RS17195 PF04898 Glutamate synthase central domain AK38_RS17200 PF16199 Radical_SAM C-terminal domain AK38_RS17200 PF04055 Radical SAM superfamily AK38_RS17210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AK38_RS17210 PF18415 Histidine kinase receptor ArcB trans-membrane domain AK38_RS17210 PF01627 Hpt domain AK38_RS17210 PF00072 Response regulator receiver domain AK38_RS17210 PF00512 His Kinase A (phospho-acceptor) domain AK38_RS17210 PF00989 PAS fold AK38_RS17225 PF00912 Transglycosylase AK38_RS17230 PF04972 BON domain AK38_RS17235 PF13580 SIS domain AK38_RS17240 PF02021 Uncharacterised protein family UPF0102 AK38_RS17245 PF04348 LppC putative lipoprotein AK38_RS17250 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AK38_RS17260 PF17954 Quercetinase C-terminal cupin domain AK38_RS17260 PF02678 Pirin AK38_RS17265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AK38_RS17265 PF03466 LysR substrate binding domain AK38_RS17275 PF01695 IstB-like ATP binding protein AK38_RS17280 PF00665 Integrase core domain AK38_RS17280 PF02796 Helix-turn-helix domain of resolvase AK38_RS17285 PF00326 Prolyl oligopeptidase family AK38_RS17295 PF01250 Ribosomal protein S6 AK38_RS17300 PF00436 Single-strand binding protein family AK38_RS17305 PF01084 Ribosomal protein S18 AK38_RS17310 PF01281 Ribosomal protein L9, N-terminal domain AK38_RS17310 PF03948 Ribosomal protein L9, C-terminal domain AK38_RS17320 PF01797 Transposase IS200 like AK38_RS17330 PF08525 Opacity-associated protein A N-terminal motif AK38_RS17330 PF04225 Opacity-associated protein A LysM-like domain AK38_RS17335 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AK38_RS17335 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AK38_RS17340 PF04405 Domain of Unknown function (DUF542) AK38_RS17340 PF01814 Hemerythrin HHE cation binding domain AK38_RS17345 PF02872 5'-nucleotidase, C-terminal domain AK38_RS17345 PF00149 Calcineurin-like phosphoesterase AK38_RS17350 PF00459 Inositol monophosphatase family AK38_RS17355 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) AK38_RS17360 PF06526 Protein of unknown function (DUF1107) AK38_RS17365 PF00571 CBS domain AK38_RS17365 PF03471 Transporter associated domain AK38_RS17365 PF01595 Cyclin M transmembrane N-terminal domain AK38_RS17370 PF01625 Peptide methionine sulfoxide reductase AK38_RS17375 PF07244 Surface antigen variable number repeat AK38_RS17375 PF01103 Surface antigen AK38_RS17375 PF17243 POTRA domain TamA domain 1 AK38_RS17385 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like AK38_RS17390 PF00719 Inorganic pyrophosphatase AK38_RS17395 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AK38_RS17400 PF01225 Mur ligase family, catalytic domain AK38_RS17400 PF08245 Mur ligase middle domain AK38_RS17400 PF02875 Mur ligase family, glutamate ligase domain AK38_RS17410 PF01316 Arginine repressor, DNA binding domain AK38_RS17410 PF02863 Arginine repressor, C-terminal domain AK38_RS17415 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AK38_RS17415 PF00056 lactate/malate dehydrogenase, NAD binding domain AK38_RS17420 PF13693 Winged helix-turn-helix DNA-binding AK38_RS17430 PF00348 Polyprenyl synthetase AK38_RS17435 PF00829 Ribosomal prokaryotic L21 protein AK38_RS17440 PF01016 Ribosomal L27 protein AK38_RS17445 PF00892 EamA-like transporter family AK38_RS17450 PF01926 50S ribosome-binding GTPase AK38_RS17450 PF01018 GTP1/OBG AK38_RS17455 PF00512 His Kinase A (phospho-acceptor) domain AK38_RS17455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AK38_RS17455 PF00672 HAMP domain AK38_RS17460 PF00486 Transcriptional regulatory protein, C terminal AK38_RS17460 PF00072 Response regulator receiver domain AK38_RS17470 PF03449 Transcription elongation factor, N-terminal AK38_RS17470 PF01272 Transcription elongation factor, GreA/GreB, C-term AK38_RS17475 PF01985 CRS1 / YhbY (CRM) domain AK38_RS17480 PF01728 FtsJ-like methyltransferase AK38_RS17485 PF00004 ATPase family associated with various cellular activities (AAA) AK38_RS17485 PF01434 Peptidase family M41 AK38_RS17485 PF06480 FtsH Extracellular AK38_RS17485 PF17862 AAA+ lid domain AK38_RS17490 PF00809 Pterin binding enzyme AK38_RS17495 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AK38_RS17495 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AK38_RS17495 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AK38_RS17495 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AK38_RS17500 PF03840 Preprotein translocase SecG subunit AK38_RS17515 PF17384 RimP C-terminal SH3 domain AK38_RS17515 PF02576 RimP N-terminal domain AK38_RS17520 PF00575 S1 RNA binding domain AK38_RS17520 PF08529 NusA N-terminal domain AK38_RS17520 PF13184 NusA-like KH domain AK38_RS17525 PF11987 Translation-initiation factor 2 AK38_RS17525 PF08364 Bacterial translation initiation factor IF-2 associated region AK38_RS17525 PF00009 Elongation factor Tu GTP binding domain AK38_RS17525 PF03144 Elongation factor Tu domain 2 AK38_RS17525 PF04760 Translation initiation factor IF-2, N-terminal region AK38_RS17530 PF02033 Ribosome-binding factor A AK38_RS17535 PF16198 tRNA pseudouridylate synthase B C-terminal domain AK38_RS17535 PF09157 Pseudouridine synthase II TruB, C-terminal AK38_RS17535 PF01509 TruB family pseudouridylate synthase (N terminal domain) AK38_RS17540 PF00312 Ribosomal protein S15 AK38_RS17555 PF00575 S1 RNA binding domain AK38_RS17555 PF03725 3' exoribonuclease family, domain 2 AK38_RS17555 PF01138 3' exoribonuclease family, domain 1 AK38_RS17555 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AK38_RS17555 PF00013 KH domain AK38_RS17560 PF13181 Tetratricopeptide repeat AK38_RS17560 PF07719 Tetratricopeptide repeat AK38_RS17565 PF00270 DEAD/DEAH box helicase AK38_RS17565 PF00271 Helicase conserved C-terminal domain AK38_RS17565 PF03880 DbpA RNA binding domain AK38_RS17565 PF12343 Cold shock protein DEAD box A AK38_RS17580 PF01381 Helix-turn-helix AK38_RS17585 PF00296 Luciferase-like monooxygenase AK38_RS17590 PF00529 HlyD membrane-fusion protein of T1SS AK38_RS17590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AK38_RS17595 PF00873 AcrB/AcrD/AcrF family AK38_RS17600 PF08139 Prokaryotic membrane lipoprotein lipid attachment site AK38_RS17600 PF02321 Outer membrane efflux protein AK38_RS17605 PF01136 Peptidase family U32 AK38_RS17610 PF01136 Peptidase family U32 AK38_RS17620 PF02036 SCP-2 sterol transfer family AK38_RS17625 PF13508 Acetyltransferase (GNAT) domain AK38_RS17630 PF01541 GIY-YIG catalytic domain AK38_RS17645 PF13416 Bacterial extracellular solute-binding protein AK38_RS17650 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS17655 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS17660 PF00005 ABC transporter AK38_RS17660 PF17912 MalK OB fold domain AK38_RS17660 PF03459 TOBE domain AK38_RS17675 PF13460 NAD(P)H-binding AK38_RS17680 PF12706 Beta-lactamase superfamily domain AK38_RS17690 PF07969 Amidohydrolase family AK38_RS17695 PF00005 ABC transporter AK38_RS17700 PF00005 ABC transporter AK38_RS17705 PF06007 Phosphonate metabolism protein PhnJ AK38_RS17710 PF05861 Bacterial phosphonate metabolism protein (PhnI) AK38_RS17715 PF05845 Bacterial phosphonate metabolism protein (PhnH) AK38_RS17735 PF03477 ATP cone domain AK38_RS17735 PF13597 Anaerobic ribonucleoside-triphosphate reductase AK38_RS17740 PF00005 ABC transporter AK38_RS17740 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AK38_RS17745 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AK38_RS17745 PF00005 ABC transporter AK38_RS17750 PF12911 N-terminal TM domain of oligopeptide transport permease C AK38_RS17750 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS17755 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS17765 PF04074 YhcH/YjgK/YiaL AK38_RS17770 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AK38_RS17770 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AK38_RS17775 PF06877 Regulator of ribonuclease activity B AK38_RS17780 PF00583 Acetyltransferase (GNAT) family AK38_RS17785 PF10458 Valyl tRNA synthetase tRNA binding arm AK38_RS17785 PF08264 Anticodon-binding domain of tRNA AK38_RS17785 PF00133 tRNA synthetases class I (I, L, M and V) AK38_RS17790 PF04364 DNA polymerase III chi subunit, HolC AK38_RS17795 PF00883 Cytosol aminopeptidase family, catalytic domain AK38_RS17795 PF02789 Cytosol aminopeptidase family, N-terminal domain AK38_RS17800 PF03739 Lipopolysaccharide export system permease LptF/LptG AK38_RS17805 PF03739 Lipopolysaccharide export system permease LptF/LptG AK38_RS17815 PF13356 Arm DNA-binding domain AK38_RS17815 PF00589 Phage integrase family AK38_RS17825 PF01119 DNA mismatch repair protein, C-terminal domain AK38_RS17825 PF08676 MutL C terminal dimerisation domain AK38_RS17830 PF01695 IstB-like ATP binding protein AK38_RS17835 PF02796 Helix-turn-helix domain of resolvase AK38_RS17835 PF00665 Integrase core domain AK38_RS17845 PF03884 DNA gyrase inhibitor YacG AK38_RS17850 PF07072 Cell division protein AK38_RS17855 PF01121 Dephospho-CoA kinase AK38_RS17865 PF00478 IMP dehydrogenase / GMP reductase domain AK38_RS17870 PF00482 Type II secretion system (T2SS), protein F AK38_RS17875 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AK38_RS17875 PF00437 Type II/IV secretion system protein AK38_RS17880 PF07963 Prokaryotic N-terminal methylation motif AK38_RS17885 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AK38_RS17885 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AK38_RS17890 PF01510 N-acetylmuramoyl-L-alanine amidase AK38_RS17895 PF17113 Regulatory signalling modulator protein AmpE AK38_RS17900 PF00324 Amino acid permease AK38_RS17905 PF07729 FCD domain AK38_RS17905 PF00392 Bacterial regulatory proteins, gntR family AK38_RS17910 PF00456 Transketolase, thiamine diphosphate binding domain AK38_RS17910 PF17831 Pyruvate dehydrogenase E1 component middle domain AK38_RS17915 PF02817 e3 binding domain AK38_RS17915 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AK38_RS17915 PF00364 Biotin-requiring enzyme AK38_RS17920 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AK38_RS17920 PF07992 Pyridine nucleotide-disulphide oxidoreductase AK38_RS17930 PF01797 Transposase IS200 like AK38_RS17935 PF06434 Aconitate hydratase 2 N-terminus AK38_RS17935 PF11791 Aconitate B N-terminal domain AK38_RS17935 PF00330 Aconitase family (aconitate hydratase) AK38_RS17940 PF06062 Uncharacterised protein family (UPF0231) AK38_RS17945 PF00892 EamA-like transporter family AK38_RS17950 PF02675 S-adenosylmethionine decarboxylase AK38_RS17955 PF17284 Spermidine synthase tetramerisation domain AK38_RS17960 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) AK38_RS17965 PF00394 Multicopper oxidase AK38_RS17965 PF10518 TAT (twin-arginine translocation) pathway signal sequence AK38_RS17965 PF07732 Multicopper oxidase AK38_RS17965 PF07731 Multicopper oxidase AK38_RS17970 PF00156 Phosphoribosyl transferase domain AK38_RS17975 PF00484 Carbonic anhydrase AK38_RS17980 PF00005 ABC transporter AK38_RS17985 PF01061 ABC-2 type transporter AK38_RS17990 PF01522 Polysaccharide deacetylase AK38_RS17995 PF02261 Aspartate decarboxylase AK38_RS18000 PF02569 Pantoate-beta-alanine ligase AK38_RS18005 PF02548 Ketopantoate hydroxymethyltransferase AK38_RS18010 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AK38_RS18015 PF01743 Poly A polymerase head domain AK38_RS18015 PF12626 Polymerase A arginine-rich C-terminus AK38_RS18015 PF12627 Probable RNA and SrmB- binding site of polymerase A AK38_RS18020 PF00749 tRNA synthetases class I (E and Q), catalytic domain AK38_RS18025 PF01258 Prokaryotic dksA/traR C4-type zinc finger AK38_RS18030 PF17746 SfsA N-terminal OB domain AK38_RS18030 PF03749 Sugar fermentation stimulation protein RE domain AK38_RS18035 PF02834 LigT like Phosphoesterase AK38_RS18040 PF08482 ATP-dependent helicase C-terminal AK38_RS18040 PF00271 Helicase conserved C-terminal domain AK38_RS18040 PF04408 Helicase associated domain (HA2) AK38_RS18040 PF00270 DEAD/DEAH box helicase AK38_RS18045 PF00912 Transglycosylase AK38_RS18045 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal AK38_RS18045 PF14814 Bifunctional transglycosylase second domain AK38_RS18045 PF00905 Penicillin binding protein transpeptidase domain AK38_RS18050 PF00005 ABC transporter AK38_RS18055 PF01497 Periplasmic binding protein AK38_RS18060 PF01032 FecCD transport family AK38_RS18065 PF00202 Aminotransferase class-III AK38_RS18070 PF00654 Voltage gated chloride channel AK38_RS18075 PF01521 Iron-sulphur cluster biosynthesis AK38_RS18080 PF03458 UPF0126 domain AK38_RS18085 PF01497 Periplasmic binding protein AK38_RS18090 PF01048 Phosphorylase superfamily AK38_RS18095 PF13286 Phosphohydrolase-associated domain AK38_RS18095 PF01966 HD domain AK38_RS18100 PF00595 PDZ domain AK38_RS18105 PF00072 Response regulator receiver domain AK38_RS18105 PF00672 HAMP domain AK38_RS18105 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AK38_RS18105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AK38_RS18105 PF01627 Hpt domain AK38_RS18105 PF00512 His Kinase A (phospho-acceptor) domain AK38_RS18110 PF02824 TGS domain AK38_RS18110 PF04607 Region found in RelA / SpoT proteins AK38_RS18110 PF13291 ACT domain AK38_RS18120 PF03819 MazG nucleotide pyrophosphohydrolase domain AK38_RS18125 PF00117 Glutamine amidotransferase class-I AK38_RS18125 PF06418 CTP synthase N-terminus AK38_RS18130 PF00113 Enolase, C-terminal TIM barrel domain AK38_RS18130 PF03952 Enolase, N-terminal domain AK38_RS18135 PF00080 Copper/zinc superoxide dismutase (SODC) AK38_RS18140 PF04055 Radical SAM superfamily AK38_RS18145 PF01242 6-pyruvoyl tetrahydropterin synthase AK38_RS18150 PF00258 Flavodoxin AK38_RS18150 PF00175 Oxidoreductase NAD-binding domain AK38_RS18150 PF00667 FAD binding domain AK38_RS18155 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AK38_RS18155 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AK38_RS18180 PF10414 Sirohaem synthase dimerisation region AK38_RS18180 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AK38_RS18180 PF14824 Sirohaem biosynthesis protein central AK38_RS18185 PF01507 Phosphoadenosine phosphosulfate reductase family AK38_RS18190 PF00009 Elongation factor Tu GTP binding domain AK38_RS18200 PF12084 Protein of unknown function (DUF3561) AK38_RS18205 PF04977 Septum formation initiator AK38_RS18210 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AK38_RS18215 PF02542 YgbB family AK38_RS18220 PF01142 tRNA pseudouridine synthase D (TruD) AK38_RS18225 PF01975 Survival protein SurE AK38_RS18235 PF01476 LysM domain AK38_RS18235 PF01551 Peptidase family M23 AK38_RS18240 PF04545 Sigma-70, region 4 AK38_RS18240 PF04539 Sigma-70 region 3 AK38_RS18240 PF04542 Sigma-70 region 2 AK38_RS18240 PF00140 Sigma-70 factor, region 1.2 AK38_RS18245 PF05190 MutS family domain IV AK38_RS18245 PF05192 MutS domain III AK38_RS18245 PF01624 MutS domain I AK38_RS18245 PF05188 MutS domain II AK38_RS18245 PF00488 MutS domain V AK38_RS18255 PF02502 Ribose/Galactose Isomerase AK38_RS18260 PF08240 Alcohol dehydrogenase GroES-like domain AK38_RS18260 PF00107 Zinc-binding dehydrogenase AK38_RS18270 PF02733 Dak1 domain AK38_RS18275 PF02734 DAK2 domain AK38_RS18280 PF13936 Helix-turn-helix domain AK38_RS18280 PF04198 Putative sugar-binding domain AK38_RS18285 PF02040 Arsenical pump membrane protein AK38_RS18290 PF01022 Bacterial regulatory protein, arsR family AK38_RS18305 PF00497 Bacterial extracellular solute-binding proteins, family 3 AK38_RS18310 PF14376 Haem-binding domain AK38_RS18310 PF00034 Cytochrome c AK38_RS18310 PF03150 Di-haem cytochrome c peroxidase AK38_RS18320 PF00593 TonB dependent receptor AK38_RS18320 PF07715 TonB-dependent Receptor Plug Domain AK38_RS18335 PF00557 Metallopeptidase family M24 AK38_RS18345 PF05683 Fumarase C-terminus AK38_RS18345 PF05681 Fumarate hydratase (Fumerase) AK38_RS18350 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AK38_RS18350 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AK38_RS18355 PF01261 Xylose isomerase-like TIM barrel AK38_RS18360 PF02653 Branched-chain amino acid transport system / permease component AK38_RS18365 PF02653 Branched-chain amino acid transport system / permease component AK38_RS18370 PF00005 ABC transporter AK38_RS18375 PF01797 Transposase IS200 like AK38_RS18385 PF00455 DeoR C terminal sensor domain AK38_RS18385 PF08220 DeoR-like helix-turn-helix domain AK38_RS18390 PF00596 Class II Aldolase and Adducin N-terminal domain AK38_RS18395 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AK38_RS18395 PF00384 Molybdopterin oxidoreductase AK38_RS18395 PF01568 Molydopterin dinucleotide binding domain AK38_RS18400 PF12800 4Fe-4S binding domain AK38_RS18400 PF13247 4Fe-4S dicluster domain AK38_RS18405 PF04976 DMSO reductase anchor subunit (DmsC) AK38_RS18410 PF02613 Nitrate reductase delta subunit AK38_RS18415 PF01292 Prokaryotic cytochrome b561 AK38_RS18420 PF07361 Cytochrome b562 AK38_RS18425 PF00141 Peroxidase AK38_RS18440 PF00005 ABC transporter AK38_RS18445 PF02653 Branched-chain amino acid transport system / permease component AK38_RS18450 PF00456 Transketolase, thiamine diphosphate binding domain AK38_RS18455 PF02779 Transketolase, pyrimidine binding domain AK38_RS18455 PF02780 Transketolase, C-terminal domain AK38_RS18460 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AK38_RS18460 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AK38_RS18475 PF07690 Major Facilitator Superfamily AK38_RS18480 PF02464 Competence-damaged protein AK38_RS18485 PF00154 recA bacterial DNA recombination protein AK38_RS18490 PF02631 RecX family AK38_RS18495 PF02272 DHHA1 domain AK38_RS18495 PF01411 tRNA synthetases class II (A) AK38_RS18495 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AK38_RS18500 PF02599 Global regulator protein family AK38_RS18530 PF13419 Haloacid dehalogenase-like hydrolase AK38_RS18535 PF09335 SNARE associated Golgi protein AK38_RS18540 PF04262 Glutamate-cysteine ligase AK38_RS18545 PF02664 S-Ribosylhomocysteinase (LuxS) AK38_RS18555 PF01797 Transposase IS200 like AK38_RS18570 PF01595 Cyclin M transmembrane N-terminal domain AK38_RS18570 PF03471 Transporter associated domain AK38_RS18570 PF00571 CBS domain AK38_RS18575 PF01578 Cytochrome C assembly protein AK38_RS18580 PF00448 SRP54-type protein, GTPase domain AK38_RS18580 PF02881 SRP54-type protein, helical bundle domain AK38_RS18580 PF02978 Signal peptide binding domain AK38_RS18585 PF00886 Ribosomal protein S16 AK38_RS18590 PF05239 PRC-barrel domain AK38_RS18590 PF01782 RimM N-terminal domain AK38_RS18595 PF01746 tRNA (Guanine-1)-methyltransferase AK38_RS18600 PF01245 Ribosomal protein L19 AK38_RS18615 PF04338 Protein of unknown function, DUF481 AK38_RS18635 PF00072 Response regulator receiver domain AK38_RS18635 PF04397 LytTr DNA-binding domain AK38_RS18640 PF00793 DAHP synthetase I family AK38_RS18645 PF02153 Prephenate dehydrogenase AK38_RS18645 PF01817 Chorismate mutase type II AK38_RS18650 PF01817 Chorismate mutase type II AK38_RS18650 PF00800 Prephenate dehydratase AK38_RS18655 PF01695 IstB-like ATP binding protein AK38_RS18660 PF02796 Helix-turn-helix domain of resolvase AK38_RS18660 PF00665 Integrase core domain AK38_RS18665 PF01817 Chorismate mutase type II AK38_RS18665 PF00800 Prephenate dehydratase AK38_RS18675 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AK38_RS18680 PF13525 Outer membrane lipoprotein AK38_RS18685 PF01479 S4 domain AK38_RS18685 PF00849 RNA pseudouridylate synthase AK38_RS18695 PF07724 AAA domain (Cdc48 subfamily) AK38_RS18695 PF10431 C-terminal, D2-small domain, of ClpB protein AK38_RS18695 PF00004 ATPase family associated with various cellular activities (AAA) AK38_RS18695 PF17871 AAA lid domain AK38_RS18695 PF02861 Clp amino terminal domain, pathogenicity island component AK38_RS18730 PF10043 Predicted periplasmic lipoprotein (DUF2279) AK38_RS18735 PF13091 PLD-like domain AK38_RS18740 PF13607 Succinyl-CoA ligase like flavodoxin domain AK38_RS18740 PF00583 Acetyltransferase (GNAT) family AK38_RS18740 PF13380 CoA binding domain AK38_RS18750 PF00085 Thioredoxin AK38_RS18755 PF00588 SpoU rRNA Methylase family AK38_RS18755 PF08032 RNA 2'-O ribose methyltransferase substrate binding AK38_RS18760 PF07690 Major Facilitator Superfamily AK38_RS18765 PF00529 HlyD membrane-fusion protein of T1SS AK38_RS18765 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AK38_RS18770 PF01047 MarR family AK38_RS18775 PF05437 Branched-chain amino acid transport protein (AzlD) AK38_RS18780 PF03591 AzlC protein AK38_RS18785 PF07690 Major Facilitator Superfamily AK38_RS18795 PF01425 Amidase AK38_RS18815 PF00497 Bacterial extracellular solute-binding proteins, family 3 AK38_RS18820 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS18830 PF00005 ABC transporter AK38_RS18835 PF00266 Aminotransferase class-V AK38_RS18840 PF01695 IstB-like ATP binding protein AK38_RS18845 PF02796 Helix-turn-helix domain of resolvase AK38_RS18845 PF00665 Integrase core domain AK38_RS18850 PF00266 Aminotransferase class-V AK38_RS18855 PF07687 Peptidase dimerisation domain AK38_RS18855 PF01546 Peptidase family M20/M25/M40 AK38_RS18860 PF08479 POTRA domain, ShlB-type AK38_RS18860 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AK38_RS18865 PF05860 haemagglutination activity domain AK38_RS18870 PF18071 HMW1C N-terminal AK38_RS18870 PF18254 HMW1 domain 2 AK38_RS18880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AK38_RS18880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AK38_RS18880 PF09317 Domain of unknown function (DUF1974) AK38_RS18885 PF13580 SIS domain AK38_RS18890 PF13230 Glutamine amidotransferases class-II AK38_RS18895 PF03734 L,D-transpeptidase catalytic domain AK38_RS18900 PF11973 NQRA C-terminal domain AK38_RS18900 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) AK38_RS18905 PF03116 NQR2, RnfD, RnfE family AK38_RS18910 PF04205 FMN-binding domain AK38_RS18915 PF02508 Rnf-Nqr subunit, membrane protein AK38_RS18920 PF02508 Rnf-Nqr subunit, membrane protein AK38_RS18925 PF00175 Oxidoreductase NAD-binding domain AK38_RS18925 PF00111 2Fe-2S iron-sulfur cluster binding domain AK38_RS18925 PF00970 Oxidoreductase FAD-binding domain AK38_RS18930 PF02424 ApbE family AK38_RS18940 PF03009 Glycerophosphoryl diester phosphodiesterase family AK38_RS18945 PF00817 impB/mucB/samB family AK38_RS18945 PF11799 impB/mucB/samB family C-terminal domain AK38_RS18945 PF11798 IMS family HHH motif AK38_RS18950 PF01546 Peptidase family M20/M25/M40 AK38_RS18950 PF07687 Peptidase dimerisation domain AK38_RS18960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AK38_RS18960 PF03466 LysR substrate binding domain AK38_RS18975 PF00156 Phosphoribosyl transferase domain AK38_RS18985 PF07417 Sigma factor-binding transcriptional regulator Crl AK38_RS18990 PF01472 PUA domain AK38_RS18990 PF00696 Amino acid kinase family AK38_RS18995 PF00171 Aldehyde dehydrogenase family AK38_RS19000 PF07317 Flagellar regulator YcgR AK38_RS19000 PF07238 PilZ domain AK38_RS19010 PF08241 Methyltransferase domain AK38_RS19025 PF01202 Shikimate kinase AK38_RS19035 PF06865 Pyrimidine/purine nucleoside phosphorylase AK38_RS19040 PF04381 Putative exonuclease, RdgC AK38_RS19045 PF00480 ROK family AK38_RS19050 PF02796 Helix-turn-helix domain of resolvase AK38_RS19050 PF00665 Integrase core domain AK38_RS19065 PF13476 AAA domain AK38_RS19070 PF12320 Type 5 capsule protein repressor C-terminal domain AK38_RS19070 PF00149 Calcineurin-like phosphoesterase AK38_RS19080 PF00072 Response regulator receiver domain AK38_RS19080 PF00486 Transcriptional regulatory protein, C terminal AK38_RS19085 PF11808 Phosphate regulon sensor protein PhoR AK38_RS19085 PF00512 His Kinase A (phospho-acceptor) domain AK38_RS19085 PF00989 PAS fold AK38_RS19085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AK38_RS19090 PF12849 PBP superfamily domain AK38_RS19095 PF05525 Branched-chain amino acid transport protein AK38_RS19100 PF00324 Amino acid permease AK38_RS19105 PF02903 Alpha amylase, N-terminal ig-like domain AK38_RS19105 PF00128 Alpha amylase, catalytic domain AK38_RS19130 PF01797 Transposase IS200 like AK38_RS19135 PF10417 C-terminal domain of 1-Cys peroxiredoxin AK38_RS19135 PF00578 AhpC/TSA family AK38_RS19140 PF04336 Acyl carrier protein phosphodiesterase AK38_RS19145 PF02547 Queuosine biosynthesis protein AK38_RS19150 PF01702 Queuine tRNA-ribosyltransferase AK38_RS19155 PF02699 Preprotein translocase subunit AK38_RS19160 PF13721 SecD export protein N-terminal TM region AK38_RS19160 PF07549 SecD/SecF GG Motif AK38_RS19160 PF02355 Protein export membrane protein AK38_RS19165 PF07549 SecD/SecF GG Motif AK38_RS19165 PF02355 Protein export membrane protein AK38_RS19185 PF03477 ATP cone domain AK38_RS19190 PF01872 RibD C-terminal domain AK38_RS19190 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AK38_RS19195 PF00885 6,7-dimethyl-8-ribityllumazine synthase AK38_RS19200 PF01029 NusB family AK38_RS19205 PF00586 AIR synthase related protein, N-terminal domain AK38_RS19205 PF02769 AIR synthase related protein, C-terminal domain AK38_RS19210 PF04608 Phosphatidylglycerophosphatase A AK38_RS19225 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AK38_RS19225 PF02780 Transketolase, C-terminal domain AK38_RS19225 PF02779 Transketolase, pyrimidine binding domain AK38_RS19230 PF00348 Polyprenyl synthetase AK38_RS19235 PF02609 Exonuclease VII small subunit AK38_RS19245 PF02926 THUMP domain AK38_RS19245 PF02568 Thiamine biosynthesis protein (ThiI) AK38_RS19250 PF01965 DJ-1/PfpI family AK38_RS19255 PF08546 Ketopantoate reductase PanE/ApbA C terminal AK38_RS19255 PF02558 Ketopantoate reductase PanE/ApbA AK38_RS19260 PF04461 Protein of unknown function (DUF520) AK38_RS19265 PF07690 Major Facilitator Superfamily AK38_RS19270 PF01040 UbiA prenyltransferase family AK38_RS19275 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AK38_RS19280 PF00510 Cytochrome c oxidase subunit III AK38_RS19285 PF00115 Cytochrome C and Quinol oxidase polypeptide I AK38_RS19290 PF06481 COX Aromatic Rich Motif AK38_RS19290 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AK38_RS19295 PF03502 Nucleoside-specific channel-forming protein, Tsx AK38_RS19300 PF07690 Major Facilitator Superfamily AK38_RS19305 PF08139 Prokaryotic membrane lipoprotein lipid attachment site AK38_RS19305 PF03923 Uncharacterized lipoprotein AK38_RS19310 PF01722 BolA-like protein AK38_RS19320 PF05697 Bacterial trigger factor protein (TF) AK38_RS19320 PF05698 Bacterial trigger factor protein (TF) C-terminus AK38_RS19320 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AK38_RS19325 PF00574 Clp protease AK38_RS19330 PF07724 AAA domain (Cdc48 subfamily) AK38_RS19330 PF10431 C-terminal, D2-small domain, of ClpB protein AK38_RS19330 PF06689 ClpX C4-type zinc finger AK38_RS19335 PF00004 ATPase family associated with various cellular activities (AAA) AK38_RS19335 PF02190 ATP-dependent protease La (LON) substrate-binding domain AK38_RS19335 PF05362 Lon protease (S16) C-terminal proteolytic domain AK38_RS19340 PF00216 Bacterial DNA-binding protein AK38_RS19345 PF13145 PPIC-type PPIASE domain AK38_RS19360 PF06508 Queuosine biosynthesis protein QueC AK38_RS19365 PF12793 Sugar transport-related sRNA regulator N-term AK38_RS19365 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AK38_RS19375 PF00291 Pyridoxal-phosphate dependent enzyme AK38_RS19380 PF13404 AsnC-type helix-turn-helix domain AK38_RS19380 PF01037 Lrp/AsnC ligand binding domain AK38_RS19385 PF00664 ABC transporter transmembrane region AK38_RS19385 PF00005 ABC transporter AK38_RS19390 PF00664 ABC transporter transmembrane region AK38_RS19390 PF00005 ABC transporter AK38_RS19395 PF00543 Nitrogen regulatory protein P-II AK38_RS19400 PF00909 Ammonium Transporter Family AK38_RS19410 PF09619 Type III secretion system lipoprotein chaperone (YscW) AK38_RS19415 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AK38_RS19425 PF05321 Haemolysin expression modulating protein AK38_RS19430 PF10757 Biofilm formation regulator YbaJ AK38_RS19440 PF00444 Ribosomal protein L36 AK38_RS19445 PF01197 Ribosomal protein L31 AK38_RS19450 PF00873 AcrB/AcrD/AcrF family AK38_RS19455 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AK38_RS19455 PF00529 HlyD membrane-fusion protein of T1SS AK38_RS19460 PF00440 Bacterial regulatory proteins, tetR family AK38_RS19460 PF08361 MAATS-type transcriptional repressor, C-terminal region AK38_RS19465 PF02635 DsrE/DsrF-like family AK38_RS19470 PF12794 Mechanosensitive ion channel inner membrane domain 1 AK38_RS19470 PF12795 Mechanosensitive ion channel porin domain AK38_RS19470 PF00924 Mechanosensitive ion channel AK38_RS19475 PF10689 Protein of unknown function (DUF2496) AK38_RS19490 PF02796 Helix-turn-helix domain of resolvase AK38_RS19490 PF00665 Integrase core domain AK38_RS19495 PF01695 IstB-like ATP binding protein AK38_RS19500 PF00156 Phosphoribosyl transferase domain AK38_RS19505 PF12170 DNA polymerase III tau subunit V interacting with alpha AK38_RS19505 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AK38_RS19505 PF12169 DNA polymerase III subunits gamma and tau domain III AK38_RS19510 PF02575 YbaB/EbfC DNA-binding family AK38_RS19515 PF02132 RecR protein AK38_RS19515 PF13662 Toprim domain AK38_RS19520 PF00183 Hsp90 protein AK38_RS19520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AK38_RS19525 PF05191 Adenylate kinase, active site lid AK38_RS19530 PF00762 Ferrochelatase AK38_RS19535 PF00970 Oxidoreductase FAD-binding domain AK38_RS19535 PF00111 2Fe-2S iron-sulfur cluster binding domain AK38_RS19535 PF00175 Oxidoreductase NAD-binding domain AK38_RS19540 PF00483 Nucleotidyl transferase AK38_RS19545 PF16363 GDP-mannose 4,6 dehydratase AK38_RS19550 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AK38_RS19555 PF01370 NAD dependent epimerase/dehydratase family AK38_RS19585 PF00534 Glycosyl transferases group 1 AK38_RS19585 PF13439 Glycosyltransferase Family 4 AK38_RS19600 PF01050 Mannose-6-phosphate isomerase AK38_RS19600 PF00483 Nucleotidyl transferase AK38_RS19605 PF00535 Glycosyl transferase family 2 AK38_RS19610 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AK38_RS19610 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AK38_RS19610 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AK38_RS19610 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AK38_RS19615 PF02706 Chain length determinant protein AK38_RS19620 PF00294 pfkB family carbohydrate kinase AK38_RS19625 PF02254 TrkA-N domain AK38_RS19625 PF00999 Sodium/hydrogen exchanger family AK38_RS19630 PF07690 Major Facilitator Superfamily AK38_RS19655 PF04073 Aminoacyl-tRNA editing domain AK38_RS19660 PF01963 TraB family AK38_RS19665 PF00403 Heavy-metal-associated domain AK38_RS19670 PF13411 MerR HTH family regulatory protein AK38_RS19675 PF01957 NfeD-like C-terminal, partner-binding AK38_RS19680 PF01145 SPFH domain / Band 7 family AK38_RS19680 PF16200 C-terminal region of band_7 AK38_RS19685 PF00085 Thioredoxin AK38_RS19690 PF00106 short chain dehydrogenase AK38_RS19695 PF13472 GDSL-like Lipase/Acylhydrolase family AK38_RS19700 PF00005 ABC transporter AK38_RS19710 PF02222 ATP-grasp domain AK38_RS19710 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AK38_RS19715 PF00731 AIR carboxylase AK38_RS19720 PF00149 Calcineurin-like phosphoesterase AK38_RS19725 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AK38_RS19730 PF01406 tRNA synthetases class I (C) catalytic domain AK38_RS19730 PF09190 DALR domain AK38_RS19740 PF01797 Transposase IS200 like AK38_RS19745 PF00308 Bacterial dnaA protein AK38_RS19750 PF03960 ArsC family AK38_RS19755 PF01435 Peptidase family M48 AK38_RS19755 PF07720 Tetratricopeptide repeat AK38_RS19760 PF01594 AI-2E family transporter AK38_RS19780 PF00578 AhpC/TSA family AK38_RS19785 PF01842 ACT domain AK38_RS19790 PF00701 Dihydrodipicolinate synthetase family AK38_RS19795 PF06804 NlpB/DapX lipoprotein AK38_RS19805 PF01797 Transposase IS200 like AK38_RS19810 PF01259 SAICAR synthetase AK38_RS19815 PF04228 Putative neutral zinc metallopeptidase AK38_RS19820 PF04284 Protein of unknown function (DUF441) AK38_RS19825 PF13718 GNAT acetyltransferase 2 AK38_RS19825 PF17176 tRNA-binding domain AK38_RS19825 PF05127 Helicase AK38_RS19825 PF08351 Domain of unknown function (DUF1726) AK38_RS19830 PF13980 Uncharacterised protein family (UPF0370) AK38_RS19835 PF02557 D-alanyl-D-alanine carboxypeptidase AK38_RS19840 PF01546 Peptidase family M20/M25/M40 AK38_RS19840 PF07687 Peptidase dimerisation domain AK38_RS19845 PF03960 ArsC family AK38_RS19860 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS19865 PF00005 ABC transporter AK38_RS19865 PF08402 TOBE domain AK38_RS19870 PF00884 Sulfatase AK38_RS19875 PF13186 Iron-sulfur cluster-binding domain AK38_RS19875 PF04055 Radical SAM superfamily AK38_RS19880 PF04307 LexA-binding, inner membrane-associated putative hydrolase AK38_RS19890 PF00873 AcrB/AcrD/AcrF family AK38_RS19900 PF00072 Response regulator receiver domain AK38_RS19900 PF00196 Bacterial regulatory proteins, luxR family AK38_RS19905 PF12800 4Fe-4S binding domain AK38_RS19905 PF00037 4Fe-4S binding domain AK38_RS19905 PF13187 4Fe-4S dicluster domain AK38_RS19910 PF03927 NapD protein AK38_RS19915 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AK38_RS19915 PF10518 TAT (twin-arginine translocation) pathway signal sequence AK38_RS19915 PF00384 Molybdopterin oxidoreductase AK38_RS19915 PF01568 Molydopterin dinucleotide binding domain AK38_RS19920 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) AK38_RS19925 PF03264 NapC/NirT cytochrome c family, N-terminal region AK38_RS19930 PF00293 NUDIX domain AK38_RS19935 PF00390 Malic enzyme, N-terminal domain AK38_RS19935 PF01515 Phosphate acetyl/butaryl transferase AK38_RS19935 PF03949 Malic enzyme, NAD binding domain AK38_RS19940 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AK38_RS19945 PF01218 Coproporphyrinogen III oxidase AK38_RS19950 PF00583 Acetyltransferase (GNAT) family AK38_RS19965 PF13018 Extended Signal Peptide of Type V secretion system AK38_RS19965 PF03797 Autotransporter beta-domain AK38_RS19965 PF16168 Adhesin of bacterial autotransporter system, probable stalk AK38_RS19965 PF03212 Pertactin AK38_RS19970 PF04076 Bacterial OB fold (BOF) protein AK38_RS19975 PF06572 Protein of unknown function (DUF1131) AK38_RS19980 PF04261 Dyp-type peroxidase family AK38_RS19985 PF00701 Dihydrodipicolinate synthetase family AK38_RS19990 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase AK38_RS20000 PF00480 ROK family AK38_RS20005 PF04074 YhcH/YjgK/YiaL AK38_RS20015 PF01380 SIS domain AK38_RS20015 PF01418 Helix-turn-helix domain, rpiR family AK38_RS20020 PF07690 Major Facilitator Superfamily AK38_RS20030 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS20035 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS20040 PF00005 ABC transporter AK38_RS20045 PF00291 Pyridoxal-phosphate dependent enzyme AK38_RS20055 PF00072 Response regulator receiver domain AK38_RS20055 PF00486 Transcriptional regulatory protein, C terminal AK38_RS20060 PF00512 His Kinase A (phospho-acceptor) domain AK38_RS20060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AK38_RS20060 PF00672 HAMP domain AK38_RS20070 PF00155 Aminotransferase class I and II AK38_RS20080 PF00557 Metallopeptidase family M24 AK38_RS20090 PF00474 Sodium:solute symporter family AK38_RS20095 PF07992 Pyridine nucleotide-disulphide oxidoreductase AK38_RS20095 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AK38_RS20100 PF12704 MacB-like periplasmic core domain AK38_RS20100 PF00005 ABC transporter AK38_RS20100 PF02687 FtsX-like permease family AK38_RS20105 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AK38_RS20110 PF00072 Response regulator receiver domain AK38_RS20110 PF00486 Transcriptional regulatory protein, C terminal AK38_RS20115 PF00672 HAMP domain AK38_RS20115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AK38_RS20115 PF16527 Two-component sensor protein CpxA, periplasmic domain AK38_RS20115 PF00512 His Kinase A (phospho-acceptor) domain AK38_RS20130 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AK38_RS20135 PF02896 PEP-utilising enzyme, TIM barrel domain AK38_RS20135 PF05524 PEP-utilising enzyme, N-terminal AK38_RS20135 PF00391 PEP-utilising enzyme, mobile domain AK38_RS20140 PF00381 PTS HPr component phosphorylation site AK38_RS20145 PF00291 Pyridoxal-phosphate dependent enzyme AK38_RS20155 PF04354 ZipA, C-terminal FtsZ-binding domain AK38_RS20160 PF00533 BRCA1 C Terminus (BRCT) domain AK38_RS20160 PF01653 NAD-dependent DNA ligase adenylation domain AK38_RS20160 PF03120 NAD-dependent DNA ligase OB-fold domain AK38_RS20160 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AK38_RS20160 PF12826 Helix-hairpin-helix motif AK38_RS20165 PF12843 Putative quorum-sensing-regulated virulence factor AK38_RS20190 PF01797 Transposase IS200 like AK38_RS20195 PF00749 tRNA synthetases class I (E and Q), catalytic domain AK38_RS20230 PF01773 Na+ dependent nucleoside transporter N-terminus AK38_RS20230 PF07662 Na+ dependent nucleoside transporter C-terminus AK38_RS20230 PF07670 Nucleoside recognition AK38_RS20235 PF01566 Natural resistance-associated macrophage protein AK38_RS20245 PF00248 Aldo/keto reductase family AK38_RS20250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AK38_RS20250 PF03466 LysR substrate binding domain AK38_RS20260 PF02685 Glucokinase AK38_RS20265 PF07350 Protein of unknown function (DUF1479) AK38_RS20270 PF00155 Aminotransferase class I and II AK38_RS20275 PF01292 Prokaryotic cytochrome b561 AK38_RS20285 PF03783 Curli production assembly/transport component CsgG AK38_RS20295 PF05643 Putative bacterial lipoprotein (DUF799) AK38_RS20305 PF02613 Nitrate reductase delta subunit AK38_RS20310 PF04976 DMSO reductase anchor subunit (DmsC) AK38_RS20315 PF13247 4Fe-4S dicluster domain AK38_RS20315 PF12800 4Fe-4S binding domain AK38_RS20320 PF00384 Molybdopterin oxidoreductase AK38_RS20320 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AK38_RS20320 PF01568 Molydopterin dinucleotide binding domain AK38_RS20330 PF05638 Type VI secretion system effector, Hcp AK38_RS20340 PF00005 ABC transporter AK38_RS20345 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS20355 PF13406 Transglycosylase SLT domain AK38_RS20405 PF17871 AAA lid domain AK38_RS20405 PF07724 AAA domain (Cdc48 subfamily) AK38_RS20405 PF10431 C-terminal, D2-small domain, of ClpB protein AK38_RS20405 PF00004 ATPase family associated with various cellular activities (AAA) AK38_RS20410 PF16970 Type-1 fimbrial protein, A AK38_RS20415 PF02753 Pili assembly chaperone PapD, C-terminal domain AK38_RS20415 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AK38_RS20420 PF13954 PapC N-terminal domain AK38_RS20420 PF00577 Outer membrane usher protein AK38_RS20420 PF13953 PapC C-terminal domain AK38_RS20425 PF00872 Transposase, Mutator family AK38_RS20430 PF00577 Outer membrane usher protein AK38_RS20430 PF13953 PapC C-terminal domain AK38_RS20430 PF13954 PapC N-terminal domain AK38_RS20470 PF00665 Integrase core domain AK38_RS20470 PF02796 Helix-turn-helix domain of resolvase AK38_RS20475 PF01695 IstB-like ATP binding protein AK38_RS20480 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AK38_RS20485 PF01648 4'-phosphopantetheinyl transferase superfamily AK38_RS20495 PF01797 Transposase IS200 like AK38_RS20500 PF12838 4Fe-4S dicluster domain AK38_RS20505 PF01418 Helix-turn-helix domain, rpiR family AK38_RS20505 PF01380 SIS domain AK38_RS20510 PF01380 SIS domain AK38_RS20520 PF14437 MafB19-like deaminase AK38_RS20525 PF01464 Transglycosylase SLT domain AK38_RS20525 PF00497 Bacterial extracellular solute-binding proteins, family 3 AK38_RS20530 PF02769 AIR synthase related protein, C-terminal domain AK38_RS20530 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AK38_RS20530 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AK38_RS20555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AK38_RS20555 PF00512 His Kinase A (phospho-acceptor) domain AK38_RS20560 PF13942 YfhG lipoprotein AK38_RS20565 PF00158 Sigma-54 interaction domain AK38_RS20565 PF00072 Response regulator receiver domain AK38_RS20570 PF00795 Carbon-nitrogen hydrolase AK38_RS20570 PF02540 NAD synthase AK38_RS20575 PF00543 Nitrogen regulatory protein P-II AK38_RS20590 PF00970 Oxidoreductase FAD-binding domain AK38_RS20590 PF00175 Oxidoreductase NAD-binding domain AK38_RS20590 PF00042 Globin AK38_RS20595 PF00464 Serine hydroxymethyltransferase AK38_RS20605 PF13505 Outer membrane protein beta-barrel domain AK38_RS20610 PF12832 MFS_1 like family AK38_RS20615 PF00874 PRD domain AK38_RS20620 PF06226 Protein of unknown function (DUF1007) AK38_RS20625 PF03824 High-affinity nickel-transport protein AK38_RS20630 PF01797 Transposase IS200 like AK38_RS20635 PF00459 Inositol monophosphatase family AK38_RS20640 PF00588 SpoU rRNA Methylase family AK38_RS20645 PF02082 Transcriptional regulator AK38_RS20650 PF00266 Aminotransferase class-V AK38_RS20655 PF01592 NifU-like N terminal domain AK38_RS20660 PF01521 Iron-sulphur cluster biosynthesis AK38_RS20665 PF00226 DnaJ domain AK38_RS20665 PF07743 HSCB C-terminal oligomerisation domain AK38_RS20670 PF00012 Hsp70 protein AK38_RS20675 PF00111 2Fe-2S iron-sulfur cluster binding domain AK38_RS20680 PF04384 Iron-sulphur cluster assembly AK38_RS20685 PF00883 Cytosol aminopeptidase family, catalytic domain AK38_RS20685 PF12404 Peptidase AK38_RS20690 PF14581 SseB protein C-terminal domain AK38_RS20690 PF07179 SseB protein N-terminal domain AK38_RS20700 PF03212 Pertactin AK38_RS20700 PF03797 Autotransporter beta-domain AK38_RS20700 PF16168 Adhesin of bacterial autotransporter system, probable stalk AK38_RS20705 PF03797 Autotransporter beta-domain AK38_RS20705 PF16168 Adhesin of bacterial autotransporter system, probable stalk AK38_RS20705 PF03212 Pertactin AK38_RS20720 PF00334 Nucleoside diphosphate kinase AK38_RS20725 PF04055 Radical SAM superfamily AK38_RS20735 PF13464 Domain of unknown function (DUF4115) AK38_RS20740 PF04551 GcpE protein AK38_RS20745 PF13393 Histidyl-tRNA synthetase AK38_RS20745 PF03129 Anticodon binding domain AK38_RS20750 PF09976 Tetratricopeptide repeat-like domain AK38_RS20755 PF13360 PQQ-like domain AK38_RS20760 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AK38_RS20760 PF01926 50S ribosome-binding GTPase AK38_RS20770 PF07191 zinc-ribbons AK38_RS20775 PF13742 OB-fold nucleic acid binding domain AK38_RS20775 PF02601 Exonuclease VII, large subunit AK38_RS20780 PF00571 CBS domain AK38_RS20780 PF00478 IMP dehydrogenase / GMP reductase domain AK38_RS20790 PF00117 Glutamine amidotransferase class-I AK38_RS20790 PF02540 NAD synthase AK38_RS20790 PF00958 GMP synthase C terminal domain AK38_RS20805 PF05638 Type VI secretion system effector, Hcp AK38_RS20835 PF00872 Transposase, Mutator family AK38_RS20850 PF08543 Phosphomethylpyrimidine kinase AK38_RS20865 PF00781 Diacylglycerol kinase catalytic domain AK38_RS20875 PF07411 Domain of unknown function (DUF1508) AK38_RS20880 PF00486 Transcriptional regulatory protein, C terminal AK38_RS20880 PF00072 Response regulator receiver domain AK38_RS20895 PF07690 Major Facilitator Superfamily AK38_RS20900 PF00873 AcrB/AcrD/AcrF family AK38_RS20905 PF00873 AcrB/AcrD/AcrF family AK38_RS20910 PF13533 Biotin-lipoyl like AK38_RS20915 PF08402 TOBE domain AK38_RS20915 PF00005 ABC transporter AK38_RS20920 PF00392 Bacterial regulatory proteins, gntR family AK38_RS20920 PF00155 Aminotransferase class I and II AK38_RS20925 PF00202 Aminotransferase class-III AK38_RS20935 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS20940 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS20945 PF00012 Hsp70 protein AK38_RS20950 PF03448 MgtE intracellular N domain AK38_RS20950 PF00571 CBS domain AK38_RS20950 PF01769 Divalent cation transporter AK38_RS20960 PF02541 Ppx/GppA phosphatase family AK38_RS20965 PF13089 Polyphosphate kinase N-terminal domain AK38_RS20965 PF17941 Polyphosphate kinase C-terminal domain 1 AK38_RS20965 PF13090 Polyphosphate kinase C-terminal domain 2 AK38_RS20965 PF02503 Polyphosphate kinase middle domain AK38_RS20970 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS20975 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS20980 PF00005 ABC transporter AK38_RS20995 PF13302 Acetyltransferase (GNAT) domain AK38_RS21000 PF00551 Formyl transferase AK38_RS21005 PF00586 AIR synthase related protein, N-terminal domain AK38_RS21005 PF02769 AIR synthase related protein, C-terminal domain AK38_RS21015 PF01797 Transposase IS200 like AK38_RS21025 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AK38_RS21025 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AK38_RS21070 PF01066 CDP-alcohol phosphatidyltransferase AK38_RS21080 PF01553 Acyltransferase AK38_RS21085 PF12147 Putative methyltransferase AK38_RS21085 PF12146 Serine aminopeptidase, S33 AK38_RS21090 PF00782 Dual specificity phosphatase, catalytic domain AK38_RS21105 PF01695 IstB-like ATP binding protein AK38_RS21110 PF00665 Integrase core domain AK38_RS21110 PF02796 Helix-turn-helix domain of resolvase AK38_RS21115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AK38_RS21115 PF03466 LysR substrate binding domain AK38_RS21120 PF00248 Aldo/keto reductase family AK38_RS21125 PF00248 Aldo/keto reductase family AK38_RS21145 PF01915 Glycosyl hydrolase family 3 C-terminal domain AK38_RS21145 PF00933 Glycosyl hydrolase family 3 N terminal domain AK38_RS21145 PF14310 Fibronectin type III-like domain AK38_RS21160 PF00872 Transposase, Mutator family AK38_RS21175 PF16168 Adhesin of bacterial autotransporter system, probable stalk AK38_RS21175 PF03797 Autotransporter beta-domain AK38_RS21175 PF13018 Extended Signal Peptide of Type V secretion system AK38_RS21175 PF03212 Pertactin AK38_RS21190 PF05638 Type VI secretion system effector, Hcp AK38_RS21215 PF13693 Winged helix-turn-helix DNA-binding AK38_RS21230 PF03611 PTS system sugar-specific permease component AK38_RS21235 PF00293 NUDIX domain AK38_RS21240 PF12850 Calcineurin-like phosphoesterase superfamily domain AK38_RS21250 PF01370 NAD dependent epimerase/dehydratase family AK38_RS21250 PF08338 Domain of unknown function (DUF1731) AK38_RS21255 PF00005 ABC transporter AK38_RS21260 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS21265 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS21270 PF00497 Bacterial extracellular solute-binding proteins, family 3 AK38_RS21275 PF02441 Flavoprotein AK38_RS21280 PF00156 Phosphoribosyl transferase domain AK38_RS21285 PF02674 Colicin V production protein AK38_RS21290 PF05036 Sporulation related domain AK38_RS21295 PF02875 Mur ligase family, glutamate ligase domain AK38_RS21295 PF08245 Mur ligase middle domain AK38_RS21300 PF01039 Carboxyl transferase domain AK38_RS21300 PF17848 Acetyl-coA carboxylase zinc finger domain AK38_RS21305 PF09335 SNARE associated Golgi protein AK38_RS21310 PF01416 tRNA pseudouridine synthase AK38_RS21315 PF01118 Semialdehyde dehydrogenase, NAD binding domain AK38_RS21315 PF02774 Semialdehyde dehydrogenase, dimerisation domain AK38_RS21320 PF01797 Transposase IS200 like AK38_RS21325 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AK38_RS21325 PF11890 Domain of unknown function (DUF3410) AK38_RS21325 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AK38_RS21340 PF00892 EamA-like transporter family AK38_RS21350 PF00419 Fimbrial protein AK38_RS21355 PF01177 Asp/Glu/Hydantoin racemase AK38_RS21360 PF00109 Beta-ketoacyl synthase, N-terminal domain AK38_RS21360 PF02801 Beta-ketoacyl synthase, C-terminal domain AK38_RS21365 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AK38_RS21365 PF01266 FAD dependent oxidoreductase AK38_RS21370 PF08891 YfcL protein AK38_RS21375 PF04315 Elongation factor P hydroxylase AK38_RS21380 PF01925 Sulfite exporter TauE/SafE AK38_RS21385 PF03411 Penicillin-insensitive murein endopeptidase AK38_RS21390 PF01264 Chorismate synthase AK38_RS21395 PF05175 Methyltransferase small domain AK38_RS21400 PF01713 Smr domain AK38_RS21405 PF00300 Histidine phosphatase superfamily (branch 1) AK38_RS21410 PF00378 Enoyl-CoA hydratase/isomerase AK38_RS21410 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AK38_RS21410 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AK38_RS21415 PF00108 Thiolase, N-terminal domain AK38_RS21415 PF02803 Thiolase, C-terminal domain AK38_RS21420 PF04175 Protein of unknown function (DUF406) AK38_RS21425 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AK38_RS21430 PF04333 MlaA lipoprotein AK38_RS21435 PF03918 Cytochrome C biogenesis protein AK38_RS21440 PF03918 Cytochrome C biogenesis protein AK38_RS21445 PF08534 Redoxin AK38_RS21450 PF01578 Cytochrome C assembly protein AK38_RS21450 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AK38_RS21455 PF03100 CcmE AK38_RS21460 PF04995 Heme exporter protein D (CcmD) AK38_RS21465 PF01578 Cytochrome C assembly protein AK38_RS21470 PF03379 CcmB protein AK38_RS21475 PF00005 ABC transporter AK38_RS21490 PF04011 LemA family AK38_RS21500 PF03831 PhnA domain AK38_RS21500 PF08274 PhnA Zinc-Ribbon AK38_RS21530 PF04717 Type VI secretion system, phage-baseplate injector AK38_RS21545 PF01695 IstB-like ATP binding protein AK38_RS21550 PF02796 Helix-turn-helix domain of resolvase AK38_RS21550 PF00665 Integrase core domain AK38_RS21555 PF11967 Recombination protein O N terminal AK38_RS21555 PF02565 Recombination protein O C terminal AK38_RS21560 PF01926 50S ribosome-binding GTPase AK38_RS21560 PF07650 KH domain AK38_RS21565 PF00035 Double-stranded RNA binding motif AK38_RS21565 PF14622 Ribonuclease-III-like AK38_RS21570 PF10502 Signal peptidase, peptidase S26 AK38_RS21575 PF03144 Elongation factor Tu domain 2 AK38_RS21575 PF00009 Elongation factor Tu GTP binding domain AK38_RS21575 PF06421 GTP-binding protein LepA C-terminus AK38_RS21575 PF00679 Elongation factor G C-terminus AK38_RS21590 PF03888 MucB/RseB N-terminal domain AK38_RS21590 PF17188 MucB/RseB C-terminal domain AK38_RS21595 PF03873 Anti sigma-E protein RseA, C-terminal domain AK38_RS21595 PF03872 Anti sigma-E protein RseA, N-terminal domain AK38_RS21600 PF08281 Sigma-70, region 4 AK38_RS21600 PF04542 Sigma-70 region 2 AK38_RS21605 PF02910 Fumarate reductase flavoprotein C-term AK38_RS21605 PF00890 FAD binding domain AK38_RS21610 PF05175 Methyltransferase small domain AK38_RS21615 PF00271 Helicase conserved C-terminal domain AK38_RS21615 PF00270 DEAD/DEAH box helicase AK38_RS21620 PF12796 Ankyrin repeats (3 copies) AK38_RS21635 PF01228 Glycine radical AK38_RS21640 PF03167 Uracil DNA glycosylase superfamily AK38_RS21645 PF01470 Pyroglutamyl peptidase AK38_RS21660 PF03746 LamB/YcsF family AK38_RS21665 PF02626 Carboxyltransferase domain, subdomain A and B AK38_RS21675 PF01784 NIF3 (NGG1p interacting factor 3) AK38_RS21680 PF02112 cAMP phosphodiesterases class-II AK38_RS21685 PF03441 FAD binding domain of DNA photolyase AK38_RS21685 PF00875 DNA photolyase AK38_RS21690 PF08349 Protein of unknown function (DUF1722) AK38_RS21695 PF10725 Protein of unknown function (DUF2517) AK38_RS21710 PF03814 Potassium-transporting ATPase A subunit AK38_RS21720 PF02669 K+-transporting ATPase, c chain AK38_RS21725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AK38_RS21725 PF13493 Domain of unknown function (DUF4118) AK38_RS21725 PF13492 GAF domain AK38_RS21725 PF00512 His Kinase A (phospho-acceptor) domain AK38_RS21725 PF02702 Osmosensitive K+ channel His kinase sensor domain AK38_RS21730 PF00072 Response regulator receiver domain AK38_RS21730 PF00486 Transcriptional regulatory protein, C terminal AK38_RS21750 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AK38_RS21750 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AK38_RS21750 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AK38_RS21750 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AK38_RS21755 PF17206 SeqA protein N-terminal domain AK38_RS21755 PF03925 SeqA protein C-terminal domain AK38_RS21770 PF04794 YdjC-like protein AK38_RS21775 PF12833 Helix-turn-helix domain AK38_RS21775 PF07883 Cupin domain AK38_RS21780 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AK38_RS21785 PF02378 Phosphotransferase system, EIIC AK38_RS21790 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AK38_RS21800 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AK38_RS21805 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AK38_RS21810 PF07885 Ion channel AK38_RS21810 PF02254 TrkA-N domain AK38_RS21820 PF06411 HdeA/HdeB family AK38_RS21825 PF03824 High-affinity nickel-transport protein AK38_RS21830 PF03253 Urea transporter AK38_RS21840 PF02492 CobW/HypB/UreG, nucleotide-binding domain AK38_RS21845 PF01730 UreF AK38_RS21850 PF02814 UreE urease accessory protein, N-terminal domain AK38_RS21850 PF05194 UreE urease accessory protein, C-terminal domain AK38_RS21855 PF00449 Urease alpha-subunit, N-terminal domain AK38_RS21855 PF01979 Amidohydrolase family AK38_RS21860 PF00699 Urease beta subunit AK38_RS21865 PF00547 Urease, gamma subunit AK38_RS21870 PF00005 ABC transporter AK38_RS21875 PF00005 ABC transporter AK38_RS21880 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS21880 PF12911 N-terminal TM domain of oligopeptide transport permease C AK38_RS21885 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS21890 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AK38_RS21895 PF00313 'Cold-shock' DNA-binding domain AK38_RS21905 PF00872 Transposase, Mutator family AK38_RS21910 PF06711 Protein of unknown function (DUF1198) AK38_RS21915 PF09400 Protein of unknown function (DUF2002) AK38_RS21920 PF06392 Acid shock protein repeat AK38_RS21930 PF07972 NrdI Flavodoxin like AK38_RS21935 PF02867 Ribonucleotide reductase, barrel domain AK38_RS21935 PF00317 Ribonucleotide reductase, all-alpha domain AK38_RS21935 PF08343 Ribonucleotide reductase N-terminal AK38_RS21940 PF00268 Ribonucleotide reductase, small chain AK38_RS21945 PF00571 CBS domain AK38_RS21945 PF00005 ABC transporter AK38_RS21950 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS21955 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AK38_RS21995 PF13356 Arm DNA-binding domain AK38_RS21995 PF00589 Phage integrase family AK38_RS22005 PF12697 Alpha/beta hydrolase family AK38_RS22015 PF01402 Ribbon-helix-helix protein, copG family AK38_RS22020 PF00258 Flavodoxin AK38_RS22025 PF01475 Ferric uptake regulator family AK38_RS22035 PF03573 outer membrane porin, OprD family AK38_RS22040 PF00749 tRNA synthetases class I (E and Q), catalytic domain AK38_RS22040 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AK38_RS22045 PF01797 Transposase IS200 like AK38_RS22050 PF00367 phosphotransferase system, EIIB AK38_RS22050 PF02378 Phosphotransferase system, EIIC AK38_RS22050 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AK38_RS22055 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AK38_RS22060 PF01979 Amidohydrolase family AK38_RS22065 PF00480 ROK family AK38_RS22065 PF01047 MarR family AK38_RS22070 PF13344 Haloacid dehalogenase-like hydrolase AK38_RS22075 PF00733 Asparagine synthase AK38_RS22075 PF13537 Glutamine amidotransferase domain AK38_RS22110 PF01494 FAD binding domain AK38_RS22115 PF01938 TRAM domain AK38_RS22115 PF00919 Uncharacterized protein family UPF0004 AK38_RS22115 PF04055 Radical SAM superfamily AK38_RS22120 PF02562 PhoH-like protein AK38_RS22125 PF02130 Uncharacterized protein family UPF0054 AK38_RS22130 PF03471 Transporter associated domain AK38_RS22130 PF00571 CBS domain AK38_RS22135 PF00795 Carbon-nitrogen hydrolase AK38_RS22140 PF00497 Bacterial extracellular solute-binding proteins, family 3 AK38_RS22145 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS22150 PF00528 Binding-protein-dependent transport system inner membrane component AK38_RS22155 PF00005 ABC transporter AK38_RS22160 PF07295 Zinc-ribbon containing domain AK38_RS22165 PF13603 Leucyl-tRNA synthetase, Domain 2 AK38_RS22165 PF00133 tRNA synthetases class I (I, L, M and V) AK38_RS22165 PF08264 Anticodon-binding domain of tRNA AK38_RS22170 PF04390 Lipopolysaccharide-assembly AK38_RS22175 PF14840 Processivity clamp loader gamma complex DNA pol III C-term AK38_RS22175 PF06144 DNA polymerase III, delta subunit AK38_RS22180 PF01467 Cytidylyltransferase-like AK38_RS22500 PF04337 Protein of unknown function, DUF480 AK38_RS22575 PF13998 MgrB protein AK38_RS22610 PF10781 Dextransucrase DSRB AK38_RS22665 PF01032 FecCD transport family AK38_RS22670 PF01032 FecCD transport family AK38_RS22920 PF13018 Extended Signal Peptide of Type V secretion system AK38_RS22920 PF13332 Hemagglutinin repeat AK38_RS22920 PF05860 haemagglutination activity domain AK38_RS22920 PF04829 Pre-toxin domain with VENN motif AK38_RS22965 PF08254 Threonine leader peptide AK38_RS23135 PF01809 Putative membrane protein insertion efficiency factor AK38_RS23195 PF01270 Glycosyl hydrolases family 8 AK38_RS23240 PF08046 IlvGEDA operon leader peptide AK38_RS23375 PF01938 TRAM domain AK38_RS23375 PF05958 tRNA (Uracil-5-)-methyltransferase AK38_RS23550 PF00589 Phage integrase family AK38_RS23935 PF06754 Phosphonate metabolism protein PhnG AK38_RS23940 PF07702 UTRA domain AK38_RS23940 PF00392 Bacterial regulatory proteins, gntR family AK38_RS24045 PF00872 Transposase, Mutator family AK38_RS24325 PF02446 4-alpha-glucanotransferase AK38_RS24330 PF00343 Carbohydrate phosphorylase AK38_RS24660 PF03466 LysR substrate binding domain AK38_RS24660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AK38_RS24665 PF00664 ABC transporter transmembrane region AK38_RS24665 PF03412 Peptidase C39 family AK38_RS24665 PF00005 ABC transporter AK38_RS24680 PF05638 Type VI secretion system effector, Hcp AK38_RS24695 PF04829 Pre-toxin domain with VENN motif AK38_RS24695 PF13332 Hemagglutinin repeat AK38_RS24700 PF13332 Hemagglutinin repeat AK38_RS24700 PF04829 Pre-toxin domain with VENN motif