locus-tag class description YOP2083 IPR011010 DNA breaking-rejoining enzyme, catalytic core YOP2083 IPR013762 Integrase-like, catalytic domain superfamily YOP2083 IPR022000 Min27-like integrase, DNA-binding domain YOP2083 IPR010998 Integrase/recombinase, N-terminal YOP2083 IPR002104 Integrase, catalytic domain YP02742 IPR005616 CcmH/CycL/Ccl2/NrfF family YP02742 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily YP02742 IPR013026 Tetratricopeptide repeat-containing domain YP02742 IPR019734 Tetratricopeptide repeat YP02742 IPR011990 Tetratricopeptide-like helical domain superfamily YPCD1.16c IPR020846 Major facilitator superfamily domain YPCD1.16c IPR004638 Drug resistance transporter EmrB-like YPCD1.16c IPR011701 Major facilitator superfamily YPCD1.16c IPR036259 MFS transporter superfamily YPCD1.57 IPR012660 Thioesterase, putative YPCD1.57 IPR029069 HotDog domain superfamily YPCD1.57 IPR000182 GNAT domain YPCD1.57 IPR016181 Acyl-CoA N-acyltransferase YPCD1.65 IPR004445 Sodium/glutamate symport carrier protein GltS YPCD1.78c IPR013527 YicC-like, N-terminal YPCD1.78c IPR005229 Conserved hypothetical protein CHP00255 YPCD1.78c IPR013551 Domain of unknown function DUF1732 YPMT1.15c IPR029044 Nucleotide-diphospho-sugar transferases YPMT1.15c IPR013482 Molybdenum cofactor guanylyltransferase YPMT1.15c IPR025877 MobA-like NTP transferase YPMT1.46Bc IPR004609 ATP-dependent DNA helicase RecG YPMT1.46Bc IPR014001 Helicase superfamily 1/2, ATP-binding domain YPMT1.46Bc IPR001650 Helicase, C-terminal YPMT1.46Bc IPR012340 Nucleic acid-binding, OB-fold YPMT1.46Bc IPR027417 P-loop containing nucleoside triphosphate hydrolase YPMT1.46Bc IPR033454 RecG, wedge domain YPMT1.46Bc IPR011545 DEAD/DEAH box helicase domain YPMT1.46c IPR033454 RecG, wedge domain YPMT1.46c IPR027417 P-loop containing nucleoside triphosphate hydrolase YPMT1.46c IPR012340 Nucleic acid-binding, OB-fold YPMT1.46c IPR001650 Helicase, C-terminal YPMT1.46c IPR011545 DEAD/DEAH box helicase domain YPMT1.46c IPR014001 Helicase superfamily 1/2, ATP-binding domain YPMT1.46c IPR004609 ATP-dependent DNA helicase RecG YPMT1.49Ac IPR002912 ACT domain YPMT1.49Ac IPR012675 Beta-grasp domain superfamily YPMT1.49Ac IPR003607 HD/PDEase domain YPMT1.49Ac IPR004811 RelA/SpoT family YPMT1.49Ac IPR033655 RelA, TGS domain YPMT1.49Ac IPR012676 TGS-like YPMT1.49Ac IPR004095 TGS YPMT1.49Ac IPR007685 RelA/SpoT YPMT1.50c IPR012676 TGS-like YPMT1.50c IPR004095 TGS YPMT1.50c IPR007685 RelA/SpoT YPMT1.50c IPR002912 ACT domain YPMT1.50c IPR004811 RelA/SpoT family YPMT1.50c IPR012675 Beta-grasp domain superfamily YPMT1.50c IPR003607 HD/PDEase domain YPMT1.50c IPR033655 RelA, TGS domain YPMT1.56c IPR013527 YicC-like, N-terminal YPMT1.56c IPR005229 Conserved hypothetical protein CHP00255 YPMT1.56c IPR013551 Domain of unknown function DUF1732 YPMT1.60c IPR036551 Flavin prenyltransferase-like YPMT1.60c IPR003382 Flavoprotein YPMT1.60c IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal YPMT1.60c IPR035929 CoaB-like superfamily YPMT1.60c IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC YPMT1.68A IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPMT1.68A IPR004839 Aminotransferase, class I/classII YPMT1.68A IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPMT1.68A IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site YPMT1.68A IPR015424 Pyridoxal phosphate-dependent transferase YPMT1.68A IPR011282 2-amino-3-ketobutyrate coenzyme A ligase YPO0001 IPR008254 Flavodoxin/nitric oxide synthase YPO0001 IPR029039 Flavoprotein-like superfamily YPO0002 IPR036390 Winged helix DNA-binding domain superfamily YPO0002 IPR019885 Transcription regulator HTH, AsnC-type, conserved site YPO0002 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain YPO0002 IPR019888 Transcription regulator AsnC-type YPO0002 IPR011008 Dimeric alpha-beta barrel YPO0002 IPR011991 ArsR-like helix-turn-helix domain YPO0002 IPR000485 AsnC-type HTH domain YPO0002 IPR036388 Winged helix-like DNA-binding domain superfamily YPO0003 IPR006195 Aminoacyl-tRNA synthetase, class II YPO0003 IPR004618 Aspartate--ammonia ligase YPO0004 IPR036465 von Willebrand factor A-like domain superfamily YPO0004 IPR002035 von Willebrand factor, type A YPO0004 IPR023481 Uncharacterised protein family ViaA YPO0004 IPR008912 Uncharacterised protein family CoxE-like YPO0005 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0005 IPR022547 ATPase, RavA, C-terminal YPO0005 IPR011704 ATPase, dynein-related, AAA domain YPO0005 IPR003593 AAA+ ATPase domain YPO0005 IPR041538 ATPase RavA-like, AAA lid domain YPO0005 IPR023671 ATPase RavA YPO0006 IPR003855 Potassium transporter YPO0006 IPR023051 Potassium uptake protein, low affinity, Kup YPO0007 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU YPO0007 IPR023750 RbsD-like superfamily YPO0007 IPR023064 D-ribose pyranase YPO0008 IPR011611 Carbohydrate kinase PfkB YPO0008 IPR002139 Ribokinase/fructokinase YPO0008 IPR011877 Ribokinase YPO0008 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YPO0008 IPR029056 Ribokinase-like YPO0009 IPR004638 Drug resistance transporter EmrB-like YPO0009 IPR011701 Major facilitator superfamily YPO0009 IPR020846 Major facilitator superfamily domain YPO0009 IPR036259 MFS transporter superfamily YPO0010 IPR011711 GntR, C-terminal YPO0010 IPR036388 Winged helix-like DNA-binding domain superfamily YPO0010 IPR000524 Transcription regulator HTH, GntR YPO0010 IPR008920 Transcription regulator FadR/GntR, C-terminal YPO0010 IPR036390 Winged helix DNA-binding domain superfamily YPO0011 IPR001207 Transposase, mutator type YPO0012 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0012 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain YPO0013 IPR013482 Molybdenum cofactor guanylyltransferase YPO0013 IPR025877 MobA-like NTP transferase YPO0013 IPR029044 Nucleotide-diphospho-sugar transferases YPO0013a IPR038134 YihD-like superfamily YPO0013a IPR009383 Protein of unknown function DUF1040 YPO0014 IPR002575 Aminoglycoside phosphotransferase YPO0014 IPR032882 SrkA/RdoA protein kinase YPO0014 IPR011009 Protein kinase-like domain superfamily YPO0015 IPR036249 Thioredoxin-like superfamily YPO0015 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL YPO0015 IPR001853 DSBA-like thioredoxin domain YPO0015 IPR013766 Thioredoxin domain YPO0015 IPR017937 Thioredoxin, conserved site YPO0017 IPR002421 5'-3' exonuclease, N-terminal YPO0017 IPR002298 DNA polymerase A YPO0017 IPR018320 DNA polymerase 1 YPO0017 IPR020045 DNA polymerase I-like, H3TH domain YPO0017 IPR001098 DNA-directed DNA polymerase, family A, palm domain YPO0017 IPR019760 DNA-directed DNA polymerase, family A, conserved site YPO0017 IPR008918 Helix-hairpin-helix motif, class 2 YPO0017 IPR036279 5'-3' exonuclease, C-terminal domain superfamily YPO0017 IPR029060 PIN-like domain superfamily YPO0017 IPR012337 Ribonuclease H-like superfamily YPO0017 IPR036397 Ribonuclease H superfamily YPO0017 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal YPO0017 IPR002562 3'-5' exonuclease domain YPO0018 IPR002686 Transposase IS200-like YPO0018 IPR036515 Transposase IS200-like superfamily YPO0019 IPR030393 EngB-type guanine nucleotide-binding (G) domain YPO0019 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC YPO0019 IPR006073 GTP binding domain YPO0019 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0020 IPR007336 Der GTPase activator YPO0021 IPR006638 Elp3/MiaB/NifB YPO0021 IPR007197 Radical SAM YPO0021 IPR023404 Radical SAM, alpha/beta horseshoe YPO0021 IPR010723 HemN, C-terminal YPO0021 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN YPO0021 IPR034505 Anaerobic coproporphyrinogen-III oxidase YPO0022 IPR002078 RNA polymerase sigma factor 54 interaction domain YPO0022 IPR011006 CheY-like superfamily YPO0022 IPR010114 DNA-binding transcriptional regulator NtrC YPO0022 IPR025944 Sigma-54 interaction domain, conserved site YPO0022 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPO0022 IPR003593 AAA+ ATPase domain YPO0022 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YPO0022 IPR009057 Homeobox-like domain superfamily YPO0022 IPR001789 Signal transduction response regulator, receiver domain YPO0022 IPR002197 DNA binding HTH domain, Fis-type YPO0022 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0023 IPR000014 PAS domain YPO0023 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPO0023 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPO0023 IPR035965 PAS domain superfamily YPO0023 IPR005467 Histidine kinase domain YPO0023 IPR013767 PAS fold YPO0023 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPO0023 IPR003594 Histidine kinase/HSP90-like ATPase YPO0023 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPO0024 IPR008147 Glutamine synthetase, beta-Grasp domain YPO0024 IPR004809 Glutamine synthetase type I YPO0024 IPR027303 Glutamine synthetase, glycine-rich site YPO0024 IPR008146 Glutamine synthetase, catalytic domain YPO0024 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain YPO0024 IPR001637 Glutamine synthetase class-I, adenylation site YPO0024 IPR027302 Glutamine synthetase, N-terminal conserved site YPO0024 IPR036651 Glutamine synthetase, N-terminal domain superfamily YPO0026 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0026 IPR031157 Tr-type G domain, conserved site YPO0026 IPR000640 Elongation factor EFG, domain V-like YPO0026 IPR035651 BipA, domain V YPO0026 IPR006298 GTP-binding protein TypA YPO0026 IPR005225 Small GTP-binding protein domain YPO0026 IPR000795 Transcription factor, GTP-binding domain YPO0026 IPR009000 Translation protein, beta-barrel domain superfamily YPO0026 IPR042116 GTP-binding protein TypA/BipA, C-terminal YPO0026 IPR004161 Translation elongation factor EFTu-like, domain 2 YPO0026 IPR035647 EF-G domain III/V-like YPO0027 IPR023198 Phosphoglycolate phosphatase-like, domain 2 YPO0027 IPR006439 HAD hydrolase, subfamily IA YPO0027 IPR036412 HAD-like superfamily YPO0027 IPR041492 Haloacid dehalogenase-like hydrolase YPO0027 IPR023214 HAD superfamily YPO0028 IPR017039 Virulence factor BrkB YPO0028 IPR023679 Uncharacterised protein family UPF0761, bacterial YPO0029 IPR003732 D-aminoacyl-tRNA deacylase DTD YPO0029 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily YPO0030 IPR002611 IstB-like ATP-binding protein YPO0030 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO0030 IPR003593 AAA+ ATPase domain YPO0030 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0030 IPR001270 ClpA/B family YPO0031 IPR017894 HTH domain, IS21 transposase-type YPO0031 IPR036397 Ribonuclease H superfamily YPO0031 IPR012337 Ribonuclease H-like superfamily YPO0031 IPR006120 Resolvase, HTH domain YPO0031 IPR001584 Integrase, catalytic core YPO0032 IPR016181 Acyl-CoA N-acyltransferase YPO0032 IPR000182 GNAT domain YPO0032 IPR029069 HotDog domain superfamily YPO0032 IPR012660 Thioesterase, putative YPO0033 IPR007844 AsmA YPO0034 IPR006043 Xanthine/uracil/vitamin C permease YPO0034 IPR006042 Xanthine/uracil permease YPO0035 IPR004445 Sodium/glutamate symport carrier protein GltS YPO0036 IPR004609 ATP-dependent DNA helicase RecG YPO0036 IPR011545 DEAD/DEAH box helicase domain YPO0036 IPR033454 RecG, wedge domain YPO0036 IPR012340 Nucleic acid-binding, OB-fold YPO0036 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0036 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPO0036 IPR001650 Helicase, C-terminal YPO0037 IPR029028 Alpha/beta knot methyltransferases YPO0037 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPO0037 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase YPO0037 IPR001537 tRNA/rRNA methyltransferase, SpoU type YPO0037 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal YPO0038 IPR003607 HD/PDEase domain YPO0038 IPR002912 ACT domain YPO0038 IPR007685 RelA/SpoT YPO0038 IPR004095 TGS YPO0038 IPR012676 TGS-like YPO0038 IPR033655 RelA, TGS domain YPO0038 IPR012675 Beta-grasp domain superfamily YPO0038 IPR004811 RelA/SpoT family YPO0039 IPR003716 DNA-directed RNA polymerase, omega subunit YPO0039 IPR006110 RNA polymerase, subunit omega/K/RPB6 YPO0039 IPR036161 RPB6/omega subunit-like superfamily YPO0039 IPR012293 RNA polymerase subunit, RPB6/omega YPO0040 IPR017665 Guanylate kinase YPO0040 IPR008144 Guanylate kinase-like domain YPO0040 IPR008145 Guanylate kinase/L-type calcium channel beta subunit YPO0040 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0040 IPR020590 Guanylate kinase, conserved site YPO0041 IPR013839 NAD-dependent DNA ligase, adenylation YPO0041 IPR010994 RuvA domain 2-like YPO0041 IPR004150 NAD-dependent DNA ligase, OB-fold YPO0041 IPR012340 Nucleic acid-binding, OB-fold YPO0041 IPR013840 NAD-dependent DNA ligase, N-terminal YPO0041 IPR020923 DNA ligase B YPO0042 IPR005115 Uncharacterised domain UPF0126 YPO0043 IPR005229 Conserved hypothetical protein CHP00255 YPO0043 IPR013551 Domain of unknown function DUF1732 YPO0043 IPR013527 YicC-like, N-terminal YPO0044 IPR020568 Ribosomal protein S5 domain 2-type fold YPO0044 IPR002381 Ribonuclease PH, bacterial-type YPO0044 IPR027408 PNPase/RNase PH domain superfamily YPO0044 IPR015847 Exoribonuclease, phosphorolytic domain 2 YPO0044 IPR001247 Exoribonuclease, phosphorolytic domain 1 YPO0044 IPR018336 Ribonuclease PH, conserved site YPO0044 IPR036345 Exoribonuclease, PH domain 2 superfamily YPO0045 IPR023031 Orotate phosphoribosyltransferase YPO0045 IPR004467 Orotate phosphoribosyl transferase domain YPO0045 IPR000836 Phosphoribosyltransferase domain YPO0045 IPR029057 Phosphoribosyltransferase-like YPO0046 IPR023769 Nucleoid occlusion factor SlmA YPO0046 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily YPO0046 IPR001647 DNA-binding HTH domain, TetR-type YPO0046 IPR009057 Homeobox-like domain superfamily YPO0046 IPR023772 DNA-binding HTH domain, TetR-type, conserved site YPO0047 IPR029054 dUTPase-like YPO0047 IPR036157 dUTPase-like superfamily YPO0047 IPR033704 dUTPase, trimeric YPO0047 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase YPO0048 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal YPO0048 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC YPO0048 IPR036551 Flavin prenyltransferase-like YPO0048 IPR035929 CoaB-like superfamily YPO0048 IPR003382 Flavoprotein YPO0049 IPR010994 RuvA domain 2-like YPO0049 IPR020891 Uncharacterised protein family UPF0758, conserved site YPO0049 IPR022820 Uncharacterised protein family UPF0758, YicR subfamily YPO0049 IPR025657 RadC-like JAB domain YPO0049 IPR037518 MPN domain YPO0049 IPR001405 Uncharacterised protein family UPF0758 YPO0050 IPR034704 L28p-like YPO0050 IPR026569 Ribosomal protein L28/L24 YPO0050 IPR037147 Ribosomal protein L28/L24 superfamily YPO0050 IPR001383 Ribosomal protein L28 YPO0051 IPR018264 Ribosomal protein L33, conserved site YPO0051 IPR001705 Ribosomal protein L33 YPO0051 IPR011332 Zinc-binding ribosomal protein YPO0051 IPR038584 Ribosomal protein L33 superfamily YPO0052 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding YPO0052 IPR010663 Zinc finger, FPG/IleRS-type YPO0052 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type YPO0052 IPR020629 Formamidopyrimidine-DNA glycosylase YPO0052 IPR035937 MutM-like, N-terminal YPO0052 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain YPO0052 IPR010979 Ribosomal protein S13-like, H2TH YPO0052 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site YPO0053 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO0053 IPR001980 Phosphopantetheine adenylyltransferase YPO0053 IPR004821 Cytidyltransferase-like domain YPO0054 IPR029044 Nucleotide-diphospho-sugar transferases YPO0054 IPR001173 Glycosyltransferase 2-like YPO0055 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal YPO0055 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily YPO0055 IPR039901 3-deoxy-D-manno-octulosonic acid transferase YPO0056 IPR011908 Lipopolysaccharide heptosyltransferase I YPO0056 IPR002201 Glycosyl transferase, family 9 YPO0057 IPR011910 ADP-heptose--LPS heptosyltransferase 2 YPO0057 IPR002201 Glycosyl transferase, family 9 YPO0058 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase YPO0058 IPR036291 NAD(P)-binding domain superfamily YPO0058 IPR001509 NAD-dependent epimerase/dehydratase YPO0059 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site YPO0059 IPR004839 Aminotransferase, class I/classII YPO0059 IPR015424 Pyridoxal phosphate-dependent transferase YPO0059 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPO0059 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPO0059 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase YPO0060 IPR013149 Alcohol dehydrogenase, C-terminal YPO0060 IPR013154 Alcohol dehydrogenase, N-terminal YPO0060 IPR036291 NAD(P)-binding domain superfamily YPO0060 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site YPO0060 IPR011032 GroES-like superfamily YPO0060 IPR004627 L-threonine 3-dehydrogenase YPO0060 IPR020843 Polyketide synthase, enoylreductase domain YPO0063 IPR011055 Duplicated hybrid motif YPO0063 IPR016047 Peptidase M23 YPO0064 IPR011258 BPG-independent PGAM, N-terminal YPO0064 IPR006124 Metalloenzyme YPO0064 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily YPO0064 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent YPO0064 IPR017850 Alkaline-phosphatase-like, core domain superfamily YPO0065 IPR001763 Rhodanese-like domain YPO0065 IPR036873 Rhodanese-like domain superfamily YPO0066 IPR011900 Glutaredoxin, GrxC YPO0066 IPR002109 Glutaredoxin YPO0066 IPR014025 Glutaredoxin subgroup YPO0066 IPR036249 Thioredoxin-like superfamily YPO0066 IPR011767 Glutaredoxin active site YPO0067 IPR035958 SecB-like superfamily YPO0067 IPR003708 Bacterial protein export chaperone SecB YPO0068 IPR013328 6-phosphogluconate dehydrogenase, domain 2 YPO0068 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent YPO0068 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal YPO0068 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPO0068 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal YPO0068 IPR036291 NAD(P)-binding domain superfamily YPO0070 IPR018357 Hexapeptide transferase, conserved site YPO0070 IPR001451 Hexapeptide repeat YPO0070 IPR042122 Serine acetyltransferase, N-terminal domain superfamily YPO0070 IPR011004 Trimeric LpxA-like superfamily YPO0070 IPR010493 Serine acetyltransferase, N-terminal YPO0070 IPR005881 Serine O-acetyltransferase YPO0071 IPR029028 Alpha/beta knot methyltransferases YPO0071 IPR001537 tRNA/rRNA methyltransferase, SpoU type YPO0071 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPO0071 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase YPO0072 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding YPO0072 IPR035451 Ada-like domain superfamily YPO0072 IPR004026 Ada DNA repair, metal-binding YPO0072 IPR036388 Winged helix-like DNA-binding domain superfamily YPO0072 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily YPO0072 IPR016221 Bifunctional regulatory protein Ada YPO0072 IPR009057 Homeobox-like domain superfamily YPO0072 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain YPO0072 IPR018060 DNA binding HTH domain, AraC-type YPO0072 IPR018062 HTH domain AraC-type, conserved site YPO0072 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain YPO0072 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site YPO0073 IPR032404 Two-component sensor protein CpxA, periplasmic domain YPO0073 IPR003594 Histidine kinase/HSP90-like ATPase YPO0073 IPR003660 HAMP domain YPO0073 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPO0073 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPO0073 IPR005467 Histidine kinase domain YPO0073 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPO0073 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPO0073 IPR038515 CpxA, periplasmic domain superfamily YPO0074 IPR039420 Transcriptional regulatory protein WalR-like YPO0074 IPR011006 CheY-like superfamily YPO0074 IPR001867 OmpR/PhoB-type DNA-binding domain YPO0074 IPR001789 Signal transduction response regulator, receiver domain YPO0074 IPR036388 Winged helix-like DNA-binding domain superfamily YPO0075 IPR012899 LTXXQ motif family protein YPO0076 IPR010106 Recombination-promoting nuclease RpnA YPO0076 IPR006842 Transposase (putative), YhgA-like YPO0077 IPR023783 Cation efflux pump FieF YPO0077 IPR027470 Cation efflux protein, cytoplasmic domain YPO0077 IPR027469 Cation efflux transmembrane domain superfamily YPO0077 IPR002524 Cation efflux protein YPO0077 IPR036837 Cation efflux protein, cytoplasmic domain superfamily YPO0078 IPR022953 ATP-dependent 6-phosphofructokinase YPO0078 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type YPO0078 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic YPO0078 IPR015912 Phosphofructokinase, conserved site YPO0078 IPR000023 Phosphofructokinase domain YPO0078 IPR035966 Phosphofructokinase superfamily YPO0079 IPR005669 Thiosulphate/Sulfate-binding protein YPO0079 IPR000957 Sulphate/thiosulphate-binding, conserved site YPO0079 IPR034408 Sulphate/thiosulphate-binding site YPO0081 IPR030676 Citrate carrier CitT-related YPO0081 IPR001898 Solute carrier family 13 YPO0082 IPR014165 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase YPO0082 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily YPO0082 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein YPO0083 IPR024078 Putative deacetylase LmbE-like domain superfamily YPO0083 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related YPO0084 IPR036388 Winged helix-like DNA-binding domain superfamily YPO0084 IPR000847 Transcription regulator HTH, LysR YPO0084 IPR005119 LysR, substrate-binding YPO0084 IPR036390 Winged helix DNA-binding domain superfamily YPO0085 IPR000652 Triosephosphate isomerase YPO0085 IPR013785 Aldolase-type TIM barrel YPO0085 IPR020861 Triosephosphate isomerase, active site YPO0085 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic YPO0085 IPR035990 Triosephosphate isomerase superfamily YPO0086 IPR009918 Protein of unknown function DUF1454 YPO0087 IPR008523 Protein of unknown function DUF805 YPO0088 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain YPO0088 IPR017927 FAD-binding domain, ferredoxin reductase-type YPO0088 IPR033892 Ferredoxin--NADP reductase, bacteria YPO0088 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YPO0088 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPO0088 IPR017938 Riboflavin synthase-like beta-barrel YPO0089 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase YPO0090 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPO0090 IPR005999 Glycerol kinase YPO0090 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPO0090 IPR000577 Carbohydrate kinase, FGGY YPO0090 IPR018483 Carbohydrate kinase, FGGY, conserved site YPO0091 IPR022357 Major intrinsic protein, conserved site YPO0091 IPR000425 Major intrinsic protein YPO0091 IPR023271 Aquaporin-like YPO0093 IPR009252 Cell division protein ZapB YPO0094 IPR036515 Transposase IS200-like superfamily YPO0094 IPR002686 Transposase IS200-like YPO0096 IPR003593 AAA+ ATPase domain YPO0096 IPR001270 ClpA/B family YPO0096 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO0096 IPR002611 IstB-like ATP-binding protein YPO0096 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0097 IPR017894 HTH domain, IS21 transposase-type YPO0097 IPR006120 Resolvase, HTH domain YPO0097 IPR036397 Ribonuclease H superfamily YPO0097 IPR001584 Integrase, catalytic core YPO0097 IPR012337 Ribonuclease H-like superfamily YPO0099 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPO0099 IPR006144 Secretion protein HlyD, conserved site YPO0103 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily YPO0103 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria YPO0103 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein YPO0103 IPR010203 Regulator of ribonuclease activity A YPO0104 IPR026046 UbiA prenyltransferase domain containing protein 1 YPO0104 IPR000537 UbiA prenyltransferase family YPO0104 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase YPO0105 IPR003593 AAA+ ATPase domain YPO0105 IPR003959 ATPase, AAA-type, core YPO0105 IPR019489 Clp ATPase, C-terminal YPO0105 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0105 IPR004491 Heat shock protein HslU YPO0106 IPR029055 Nucleophile aminohydrolases, N-terminal YPO0106 IPR001353 Proteasome, subunit alpha/beta YPO0106 IPR022281 ATP-dependent protease, HslV subunit YPO0106 IPR023333 Proteasome B-type subunit YPO0107 IPR007730 Sporulation-like domain YPO0107 IPR036680 Sporulation-like domain superfamily YPO0107 IPR011930 Cell division protein FtsN YPO0108 IPR000843 LacI-type HTH domain YPO0108 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPO0108 IPR028082 Periplasmic binding protein-like I YPO0110 IPR001650 Helicase, C-terminal YPO0110 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0110 IPR011545 DEAD/DEAH box helicase domain YPO0110 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPO0110 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain YPO0110 IPR041236 Primosomal protein N, C-terminal domain YPO0110 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily YPO0110 IPR041222 Primosomal protein N', 3' DNA-binding domain YPO0110 IPR005259 Primosomal protein N' YPO0111 IPR034704 L28p-like YPO0111 IPR002150 Ribosomal protein L31 YPO0111 IPR027491 Ribosomal protein L31 type A YPO0111 IPR042105 Ribosomal protein L31 superfamily YPO0112 IPR038972 Inner membrane protein YiaA-like YPO0112 IPR008024 YiaAB two helix YPO0114 IPR010985 Ribbon-helix-helix YPO0114 IPR002084 Methionine repressor MetJ YPO0114 IPR023453 Methionine repressor MetJ domain superfamily YPO0116 IPR019811 Homoserine dehydrogenase, conserved site YPO0116 IPR036393 Acetylglutamate kinase-like superfamily YPO0116 IPR036291 NAD(P)-binding domain superfamily YPO0116 IPR001342 Homoserine dehydrogenase, catalytic YPO0116 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I YPO0116 IPR018042 Aspartate kinase, conserved site YPO0116 IPR001341 Aspartate kinase YPO0116 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding YPO0116 IPR001048 Aspartate/glutamate/uridylate kinase YPO0116 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain YPO0117 IPR004620 5,10-methylenetetrahydrofolate reductase YPO0117 IPR003171 Methylenetetrahydrofolate reductase YPO0117 IPR029041 FAD-linked oxidoreductase-like YPO0118 IPR036397 Ribonuclease H superfamily YPO0118 IPR012337 Ribonuclease H-like superfamily YPO0118 IPR001584 Integrase, catalytic core YPO0118 IPR038965 Transposase InsF-like YPO0118 IPR025948 HTH-like domain YPO0120 IPR036390 Winged helix DNA-binding domain superfamily YPO0120 IPR014036 DeoR C-terminal sensor domain YPO0120 IPR001034 DeoR-type HTH domain YPO0120 IPR037171 NagB/RpiA transferase-like YPO0120 IPR018356 Transcription regulator, HTH DeoR-type, conserved site YPO0120 IPR036388 Winged helix-like DNA-binding domain superfamily YPO0121 IPR038236 GlpG peptidase, N-terminal domain superfamily YPO0121 IPR022732 Peptidase S54, GlpG peptidase, N-terminal YPO0121 IPR023662 Rhomboid protease GlpG YPO0121 IPR035952 Rhomboid-like superfamily YPO0121 IPR022764 Peptidase S54, rhomboid domain YPO0122 IPR001763 Rhodanese-like domain YPO0122 IPR036873 Rhodanese-like domain superfamily YPO0122 IPR023695 Thiosulfate sulfurtransferase, bacterial YPO0123 IPR016032 Signal transduction response regulator, C-terminal effector YPO0123 IPR036388 Winged helix-like DNA-binding domain superfamily YPO0123 IPR000792 Transcription regulator LuxR, C-terminal YPO0123 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0123 IPR011990 Tetratricopeptide-like helical domain superfamily YPO0123 IPR041617 MalT-like TPR region YPO0123 IPR023768 Transcriptional regulator HTH-type, MalT YPO0126 IPR003385 Glycoside hydrolase, family 77 YPO0126 IPR017853 Glycoside hydrolase superfamily YPO0127 IPR017726 Fe/S biogenesis protein NfuA YPO0127 IPR000361 FeS cluster biogenesis YPO0127 IPR034904 Fe-S cluster assembly domain superfamily YPO0127 IPR035903 HesB-like domain superfamily YPO0127 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal YPO0128 IPR029057 Phosphoribosyltransferase-like YPO0128 IPR000836 Phosphoribosyltransferase domain YPO0128 IPR005222 Competence protein ComF YPO0129 IPR000073 Alpha/beta hydrolase fold-1 YPO0129 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase YPO0129 IPR029058 Alpha/Beta hydrolase fold YPO0130 IPR036275 YdgH-like superfamily YPO0130 IPR025543 Dodecin-like YPO0130 IPR010854 Domain of unknown function DUF1471 YPO0131 IPR023732 Probable [Fe-S]-dependent transcriptional repressor YPO0131 IPR015102 Transcriptional regulator HTH-type, FeoC YPO0131 IPR036388 Winged helix-like DNA-binding domain superfamily YPO0131 IPR036390 Winged helix DNA-binding domain superfamily YPO0132 IPR030389 FeoB-type guanine nucleotide-binding (G) domain YPO0132 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain YPO0132 IPR003373 Ferrous iron transport protein B YPO0132 IPR011640 Ferrous iron transport protein B, C-terminal YPO0132 IPR041069 FeoB, cytosolic helical domain YPO0132 IPR005225 Small GTP-binding protein domain YPO0132 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0133 IPR007167 Ferrous iron transporter FeoA domain YPO0133 IPR038157 Ferrous iron transporter, core domain YPO0133 IPR008988 Transcriptional repressor, C-terminal YPO0134 IPR022967 RNA-binding domain, S1 YPO0134 IPR037027 YqgF/RNase H-like domain superfamily YPO0134 IPR006641 YqgF/RNase H-like domain YPO0134 IPR032639 Tex protein, YqgF-like domain YPO0134 IPR003029 S1 domain YPO0134 IPR018974 Tex-like protein, N-terminal YPO0134 IPR041692 HHH domain 9 YPO0134 IPR012340 Nucleic acid-binding, OB-fold YPO0134 IPR012337 Ribonuclease H-like superfamily YPO0134 IPR010994 RuvA domain 2-like YPO0134 IPR023319 Tex-like protein, HTH domain superfamily YPO0134 IPR023323 Tex-like domain superfamily YPO0135 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal YPO0135 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal YPO0135 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily YPO0135 IPR006358 Transcription elongation factor GreB YPO0135 IPR028624 Transcription elongation factor GreA/GreB YPO0135 IPR018151 Transcription elongation factor, GreA/GreB, conserved site YPO0135 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily YPO0135 IPR023459 Transcription elongation factor GreA/GreB family YPO0136 IPR016032 Signal transduction response regulator, C-terminal effector YPO0136 IPR039420 Transcriptional regulatory protein WalR-like YPO0136 IPR036388 Winged helix-like DNA-binding domain superfamily YPO0136 IPR011006 CheY-like superfamily YPO0136 IPR001789 Signal transduction response regulator, receiver domain YPO0136 IPR001867 OmpR/PhoB-type DNA-binding domain YPO0137 IPR005467 Histidine kinase domain YPO0137 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPO0137 IPR003594 Histidine kinase/HSP90-like ATPase YPO0137 IPR003660 HAMP domain YPO0137 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPO0137 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPO0137 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPO0138 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site YPO0138 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal YPO0138 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal YPO0138 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising YPO0139 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily YPO0139 IPR016153 Heat shock protein Hsp33, N-terminal YPO0139 IPR016154 Heat shock protein Hsp33, C-terminal YPO0139 IPR000397 Heat shock protein Hsp33 YPO0140 IPR002942 RNA-binding S4 domain YPO0140 IPR025708 Heat shock protein 15 YPO0140 IPR036986 RNA-binding S4 domain superfamily YPO0141 IPR041492 Haloacid dehalogenase-like hydrolase YPO0141 IPR036412 HAD-like superfamily YPO0141 IPR006439 HAD hydrolase, subfamily IA YPO0141 IPR023214 HAD superfamily YPO0142 IPR010771 Intracellular growth attenuator IgaA YPO0144 IPR020084 NUDIX hydrolase, conserved site YPO0144 IPR000086 NUDIX hydrolase domain YPO0144 IPR015797 NUDIX hydrolase-like domain superfamily YPO0145 IPR023346 Lysozyme-like domain superfamily YPO0145 IPR036950 Penicillin binding protein transglycosylase domain YPO0145 IPR031376 Penicillin-binding protein, OB-like domain YPO0145 IPR012338 Beta-lactamase/transpeptidase-like YPO0145 IPR001460 Penicillin-binding protein, transpeptidase YPO0145 IPR001264 Glycosyl transferase, family 51 YPO0150 IPR038591 NolW-like superfamily YPO0150 IPR004846 Type II/III secretion system YPO0150 IPR011662 Secretin/TonB, short N-terminal domain YPO0150 IPR013355 Type IV pilus secretin PilQ YPO0150 IPR005644 NolW-like YPO0150 IPR001775 GspD/PilQ family YPO0150 IPR004845 Type II secretion system GspD, conserved site YPO0151 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0151 IPR031322 Shikimate kinase/gluconokinase YPO0151 IPR000623 Shikimate kinase/Threonine synthase-like 1 YPO0151 IPR023000 Shikimate kinase, conserved site YPO0152 IPR016037 3-dehydroquinate synthase AroB YPO0152 IPR030963 3-dehydroquinate synthase family YPO0152 IPR030960 3-dehydroquinate synthase domain YPO0153 IPR036680 Sporulation-like domain superfamily YPO0153 IPR007730 Sporulation-like domain YPO0154 IPR012263 Adenine modification methylase, M.EcoRV-type YPO0154 IPR023095 Adenine-specific methyltransferase, domain 2 YPO0154 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPO0154 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO0154 IPR012327 D12 class N6 adenine-specific DNA methyltransferase YPO0155 IPR011060 Ribulose-phosphate binding barrel YPO0155 IPR026019 Ribulose-phosphate 3-epimerase YPO0155 IPR000056 Ribulose-phosphate 3-epimerase-like YPO0155 IPR013785 Aldolase-type TIM barrel YPO0156 IPR006439 HAD hydrolase, subfamily IA YPO0156 IPR023198 Phosphoglycolate phosphatase-like, domain 2 YPO0156 IPR036412 HAD-like superfamily YPO0156 IPR037512 Phosphoglycolate phosphatase, prokaryotic YPO0156 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic YPO0156 IPR041492 Haloacid dehalogenase-like hydrolase YPO0156 IPR023214 HAD superfamily YPO0157 IPR002305 Aminoacyl-tRNA synthetase, class Ic YPO0157 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO0157 IPR002306 Tryptophan-tRNA ligase YPO0157 IPR024109 Tryptophan-tRNA ligase, bacterial-type YPO0157 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPO0158 IPR000878 Tetrapyrrole methylase YPO0158 IPR035996 Tetrapyrrole methylase superfamily YPO0158 IPR014777 Tetrapyrrole methylase, subdomain 1 YPO0158 IPR014776 Tetrapyrrole methylase, subdomain 2 YPO0158 IPR006366 Uroporphyrin-III C-methyltransferase YPO0158 IPR036291 NAD(P)-binding domain superfamily YPO0158 IPR012409 Sirohaem synthase YPO0158 IPR028281 Siroheme synthase, central domain YPO0158 IPR019478 Sirohaem synthase, dimerisation domain YPO0158 IPR037115 Sirohaem synthase, dimerisation domain superfamily YPO0158 IPR006367 Sirohaem synthase, N-terminal YPO0158 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site YPO0159 IPR000292 Formate/nitrite transporter YPO0159 IPR023271 Aquaporin-like YPO0159 IPR024002 Formate/nitrite transporter, conserved site YPO0160 IPR017881 Nitrite reductase (NADH) small subunit YPO0160 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily YPO0160 IPR012748 Rieske-like [2Fe-2S] domain, NirD-type YPO0161 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB YPO0161 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily YPO0161 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain YPO0161 IPR023753 FAD/NAD(P)-binding domain YPO0161 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site YPO0161 IPR036188 FAD/NAD(P)-binding domain superfamily YPO0161 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily YPO0161 IPR007419 BFD-like [2Fe-2S]-binding domain YPO0161 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal YPO0161 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain YPO0161 IPR017121 Nitrite reductase [NAD(P)H], large subunit YPO0162 IPR013108 Amidohydrolase 3 YPO0162 IPR032466 Metal-dependent hydrolase YPO0162 IPR011059 Metal-dependent hydrolase, composite domain superfamily YPO0163 IPR023528 Major facilitator superfamily transporter, TsgA YPO0163 IPR011701 Major facilitator superfamily YPO0163 IPR020846 Major facilitator superfamily domain YPO0163 IPR036259 MFS transporter superfamily YPO0165 IPR028082 Periplasmic binding protein-like I YPO0165 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPO0165 IPR000843 LacI-type HTH domain YPO0166 IPR019802 Glycoside hydrolase, family 4, conserved site YPO0166 IPR001088 Glycoside hydrolase, family 4 YPO0166 IPR022616 Glycosyl hydrolase, family 4, C-terminal YPO0166 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal YPO0166 IPR036291 NAD(P)-binding domain superfamily YPO0167 IPR029000 Cyclophilin-like domain superfamily YPO0167 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site YPO0167 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain YPO0168 IPR033186 Helicase HerA-like C-terminal YPO0168 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0169 IPR017926 Glutamine amidotransferase YPO0169 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain YPO0169 IPR029062 Class I glutamine amidotransferase-like YPO0171 IPR036397 Ribonuclease H superfamily YPO0171 IPR012337 Ribonuclease H-like superfamily YPO0171 IPR006120 Resolvase, HTH domain YPO0171 IPR001584 Integrase, catalytic core YPO0171 IPR017894 HTH domain, IS21 transposase-type YPO0172 IPR001270 ClpA/B family YPO0172 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO0172 IPR002611 IstB-like ATP-binding protein YPO0172 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0172 IPR003593 AAA+ ATPase domain YPO0174 IPR032692 Integral membrane protein YccS, N-terminal YPO0174 IPR010020 Integral membrane protein, YccS/YhfK YPO0175 IPR036390 Winged helix DNA-binding domain superfamily YPO0175 IPR000595 Cyclic nucleotide-binding domain YPO0175 IPR012318 Crp-type HTH domain YPO0175 IPR036388 Winged helix-like DNA-binding domain superfamily YPO0175 IPR014710 RmlC-like jelly roll fold YPO0175 IPR018335 Transcription regulator HTH, Crp-type, conserved site YPO0175 IPR018490 Cyclic nucleotide-binding-like YPO0175 IPR018488 Cyclic nucleotide-binding, conserved site YPO0176 IPR036102 OsmC/Ohr superfamily YPO0176 IPR003718 OsmC/Ohr family YPO0176 IPR015946 K homology domain-like, alpha/beta YPO0178 IPR006082 Phosphoribulokinase YPO0178 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0178 IPR006083 Phosphoribulokinase/uridine kinase YPO0179 IPR036685 YehU-like superfamily YPO0179 IPR010648 Uncharacterised protein family UPF0270 YPO0180 IPR000073 Alpha/beta hydrolase fold-1 YPO0180 IPR012020 AB hydrolase 4 family YPO0180 IPR000952 AB hydrolase 4, conserved site YPO0180 IPR029058 Alpha/Beta hydrolase fold YPO0181 IPR001123 Amino acid exporter protein, LeuE-type YPO0182 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain YPO0182 IPR010068 Taurine ABC transporter, substrate-binding protein TauA YPO0182 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPO0183 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0183 IPR015859 ABC transporter, taurine import, TauD YPO0183 IPR017871 ABC transporter, conserved site YPO0183 IPR003439 ABC transporter-like YPO0183 IPR003593 AAA+ ATPase domain YPO0184 IPR035906 MetI-like superfamily YPO0184 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO0185 IPR003819 TauD/TfdA-like domain YPO0185 IPR042098 Taurine dioxygenase TauD-like superfamily YPO0187 IPR029044 Nucleotide-diphospho-sugar transferases YPO0187 IPR001173 Glycosyltransferase 2-like YPO0190 IPR029039 Flavoprotein-like superfamily YPO0190 IPR003680 Flavodoxin-like fold YPO0190 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG YPO0191 IPR006153 Cation/H+ exchanger YPO0191 IPR003148 Regulator of K+ conductance, N-terminal YPO0191 IPR036291 NAD(P)-binding domain superfamily YPO0191 IPR038770 Sodium/solute symporter superfamily YPO0191 IPR020884 Glutathione-regulated potassium-efflux system protein KefB YPO0191 IPR004771 K+/H+ exchanger YPO0192 IPR012658 Conserved hypothetical protein CHP02443 YPO0193 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain YPO0194 IPR007236 SlyX YPO0195 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal YPO0195 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain YPO0195 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily YPO0196 IPR039446 Transcriptional regulator DauR-like YPO0196 IPR039445 Transcriptional regulator DauR-like, HTH domain YPO0196 IPR013559 YheO-like YPO0197 IPR003787 Sulphur relay, DsrE/F-like protein YPO0197 IPR027396 DsrEFH-like YPO0197 IPR017463 Sulphur relay, TusD/DsrE YPO0198 IPR003787 Sulphur relay, DsrE/F-like protein YPO0198 IPR027396 DsrEFH-like YPO0198 IPR017462 Sulphur relay, TusC/DsrF YPO0198 IPR037450 Sulphur relay, TusC YPO0199 IPR007215 Sulphur relay, TusB/DsrH YPO0199 IPR023526 Sulphur relay, TusB YPO0199 IPR027396 DsrEFH-like YPO0200 IPR012340 Nucleic acid-binding, OB-fold YPO0200 IPR006032 Ribosomal protein S12/S23 YPO0200 IPR005679 Ribosomal protein S12, bacterial-type YPO0201 IPR000235 Ribosomal protein S5/S7 YPO0201 IPR005717 Ribosomal protein S7, bacterial/organellar-type YPO0201 IPR020606 Ribosomal protein S7, conserved site YPO0201 IPR023798 Ribosomal protein S7 domain YPO0201 IPR036823 Ribosomal protein S7 domain superfamily YPO0202 IPR035649 EFG, domain V YPO0202 IPR000640 Elongation factor EFG, domain V-like YPO0202 IPR004161 Translation elongation factor EFTu-like, domain 2 YPO0202 IPR035647 EF-G domain III/V-like YPO0202 IPR031157 Tr-type G domain, conserved site YPO0202 IPR004540 Translation elongation factor EFG/EF2 YPO0202 IPR020568 Ribosomal protein S5 domain 2-type fold YPO0202 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPO0202 IPR005225 Small GTP-binding protein domain YPO0202 IPR009000 Translation protein, beta-barrel domain superfamily YPO0202 IPR009022 Elongation factor G, domain III YPO0202 IPR005517 Translation elongation factor EFG/EF2, domain IV YPO0202 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0202 IPR041095 Elongation Factor G, domain II YPO0202 IPR000795 Transcription factor, GTP-binding domain YPO0203 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle YPO0203 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal YPO0203 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal YPO0203 IPR009000 Translation protein, beta-barrel domain superfamily YPO0203 IPR004161 Translation elongation factor EFTu-like, domain 2 YPO0203 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain YPO0203 IPR031157 Tr-type G domain, conserved site YPO0203 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0203 IPR005225 Small GTP-binding protein domain YPO0203 IPR000795 Transcription factor, GTP-binding domain YPO0203 IPR033720 Elongation factor Tu, domain 2 YPO0204 IPR002686 Transposase IS200-like YPO0204 IPR036515 Transposase IS200-like superfamily YPO0205 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily YPO0205 IPR007419 BFD-like [2Fe-2S]-binding domain YPO0206 IPR012347 Ferritin-like YPO0206 IPR009040 Ferritin-like diiron domain YPO0206 IPR009078 Ferritin-like superfamily YPO0206 IPR008331 Ferritin/DPS protein domain YPO0206 IPR002024 Bacterioferritin YPO0209 IPR027486 Ribosomal protein S10 domain YPO0209 IPR001848 Ribosomal protein S10 YPO0209 IPR036838 Ribosomal protein S10 domain superfamily YPO0209 IPR018268 Ribosomal protein S10, conserved site YPO0210 IPR019927 Ribosomal protein L3, bacterial/organelle-type YPO0210 IPR009000 Translation protein, beta-barrel domain superfamily YPO0210 IPR000597 Ribosomal protein L3 YPO0210 IPR019926 Ribosomal protein L3, conserved site YPO0211 IPR013005 50S ribosomal protein uL4 YPO0211 IPR023574 Ribosomal protein L4 domain superfamily YPO0211 IPR002136 Ribosomal protein L4/L1e YPO0212 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily YPO0212 IPR001014 Ribosomal protein L23/L25, conserved site YPO0212 IPR013025 Ribosomal protein L25/L23 YPO0212 IPR012678 Ribosomal protein L23/L15e core domain superfamily YPO0213 IPR022671 Ribosomal protein L2, conserved site YPO0213 IPR014722 Ribosomal protein L2, domain 2 YPO0213 IPR022666 Ribosomal Proteins L2, RNA binding domain YPO0213 IPR012340 Nucleic acid-binding, OB-fold YPO0213 IPR008991 Translation protein SH3-like domain superfamily YPO0213 IPR022669 Ribosomal protein L2, C-terminal YPO0213 IPR002171 Ribosomal protein L2 YPO0213 IPR005880 Ribosomal protein L2, bacterial/organellar-type YPO0213 IPR014726 Ribosomal protein L2, domain 3 YPO0214 IPR023575 Ribosomal protein S19, superfamily YPO0214 IPR020934 Ribosomal protein S19 conserved site YPO0214 IPR002222 Ribosomal protein S19/S15 YPO0214 IPR005732 Ribosomal protein S19, bacterial-type YPO0215 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type YPO0215 IPR018260 Ribosomal protein L22/L17, conserved site YPO0215 IPR001063 Ribosomal protein L22/L17 YPO0215 IPR036394 Ribosomal protein L22/L17 superfamily YPO0216 IPR009019 K homology domain superfamily, prokaryotic type YPO0216 IPR001351 Ribosomal protein S3, C-terminal YPO0216 IPR004044 K Homology domain, type 2 YPO0216 IPR036419 Ribosomal protein S3, C-terminal domain superfamily YPO0216 IPR018280 Ribosomal protein S3, conserved site YPO0216 IPR015946 K homology domain-like, alpha/beta YPO0216 IPR004087 K Homology domain YPO0216 IPR005704 Ribosomal protein S3, bacterial-type YPO0217 IPR020798 Ribosomal protein L16, conserved site YPO0217 IPR000114 Ribosomal protein L16 YPO0217 IPR036920 Ribosomal protein L10e/L16 superfamily YPO0217 IPR016180 Ribosomal protein L10e/L16 YPO0218 IPR001854 Ribosomal protein L29/L35 YPO0218 IPR036049 Ribosomal protein L29/L35 superfamily YPO0218 IPR018254 Ribosomal protein L29, conserved site YPO0219 IPR019979 Ribosomal protein S17, conserved site YPO0219 IPR000266 Ribosomal protein S17/S11 YPO0219 IPR019984 30S ribosomal protein S17 YPO0219 IPR012340 Nucleic acid-binding, OB-fold YPO0220 IPR036853 Ribosomal protein L14 superfamily YPO0220 IPR019972 Ribosomal protein L14P, conserved site YPO0220 IPR005745 Ribosomal protein L14P, bacterial-type YPO0220 IPR000218 Ribosomal protein L14P YPO0221 IPR008991 Translation protein SH3-like domain superfamily YPO0221 IPR005825 Ribosomal protein L24/L26, conserved site YPO0221 IPR003256 Ribosomal protein L24 YPO0221 IPR041988 Ribosomal Protein L26/L24, KOW domain YPO0221 IPR005824 KOW YPO0221 IPR014722 Ribosomal protein L2, domain 2 YPO0222 IPR020930 Ribosomal protein L5, bacterial-type YPO0222 IPR031309 Ribosomal protein L5, C-terminal YPO0222 IPR022803 Ribosomal protein L5 domain superfamily YPO0222 IPR031310 Ribosomal protein L5, N-terminal YPO0222 IPR002132 Ribosomal protein L5 YPO0222a IPR023036 Ribosomal protein S14, bacterial/plastid YPO0222a IPR018271 Ribosomal protein S14, conserved site YPO0222a IPR001209 Ribosomal protein S14 YPO0223 IPR000630 Ribosomal protein S8 YPO0223 IPR035987 Ribosomal protein S8 superfamily YPO0224 IPR000702 Ribosomal protein L6 YPO0224 IPR002358 Ribosomal protein L6, conserved site YPO0224 IPR019906 Ribosomal protein L6, bacterial-type YPO0224 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily YPO0224 IPR020040 Ribosomal protein L6, alpha-beta domain YPO0225 IPR005484 Ribosomal protein L18 YPO0225 IPR004389 Ribosomal protein L18, bacterial-type YPO0226 IPR000851 Ribosomal protein S5 YPO0226 IPR013810 Ribosomal protein S5, N-terminal YPO0226 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPO0226 IPR020568 Ribosomal protein S5 domain 2-type fold YPO0226 IPR005324 Ribosomal protein S5, C-terminal YPO0226 IPR005712 Ribosomal protein S5, bacterial-type YPO0226 IPR018192 Ribosomal protein S5, N-terminal, conserved site YPO0227 IPR018038 Ribosomal protein L30, conserved site YPO0227 IPR005996 Ribosomal protein L30, bacterial-type YPO0227 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily YPO0227 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain YPO0228 IPR036227 Ribosomal L18e/L15P superfamily YPO0228 IPR030878 Ribosomal protein L15 YPO0228 IPR005749 Ribosomal protein L15, bacterial-type YPO0228 IPR001196 Ribosomal protein L15, conserved site YPO0228 IPR021131 Ribosomal protein L18e/L15P YPO0229 IPR026593 Protein translocase subunit SecY YPO0229 IPR023201 SecY domain superfamily YPO0229 IPR030659 SecY conserved site YPO0229 IPR002208 SecY/SEC61-alpha family YPO0230 IPR000473 Ribosomal protein L36 YPO0230 IPR035977 Ribosomal protein L36 superfamily YPO0231 IPR027437 30s ribosomal protein S13, C-terminal YPO0231 IPR018269 Ribosomal protein S13, conserved site YPO0231 IPR019980 Ribosomal protein S13, bacterial-type YPO0231 IPR001892 Ribosomal protein S13 YPO0231 IPR010979 Ribosomal protein S13-like, H2TH YPO0232 IPR018102 Ribosomal S11, conserved site YPO0232 IPR019981 Ribosomal protein S11, bacterial-type YPO0232 IPR001971 Ribosomal protein S11 YPO0232 IPR036967 Ribosomal protein S11 superfamily YPO0233 IPR001912 Ribosomal protein S4/S9, N-terminal YPO0233 IPR005709 Ribosomal protein S4, bacterial-type YPO0233 IPR018079 Ribosomal protein S4, conserved site YPO0233 IPR022801 Ribosomal protein S4/S9 YPO0233 IPR002942 RNA-binding S4 domain YPO0233 IPR036986 RNA-binding S4 domain superfamily YPO0234 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type YPO0234 IPR011773 DNA-directed RNA polymerase, alpha subunit YPO0234 IPR036603 RNA polymerase, RBP11-like subunit YPO0234 IPR011260 RNA polymerase, alpha subunit, C-terminal YPO0234 IPR036643 DNA-directed RNA polymerase, insert domain superfamily YPO0234 IPR011262 DNA-directed RNA polymerase, insert domain YPO0235 IPR036373 Ribosomal protein L17 superfamily YPO0235 IPR000456 Ribosomal protein L17 YPO0236 IPR009061 Putative DNA-binding domain superfamily YPO0236 IPR000551 MerR-type HTH domain YPO0236 IPR011788 Zn(II)-responsive transcriptional regulator YPO0237 IPR005589 Alternative ribosome-rescue factor A YPO0238 IPR001185 Large-conductance mechanosensitive channel YPO0238 IPR019823 Large-conductance mechanosensitive channel, conserved site YPO0238 IPR036019 Gated mechanosensitive channel YPO0238 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L YPO0239 IPR006036 Potassium uptake protein TrkA YPO0239 IPR003148 Regulator of K+ conductance, N-terminal YPO0239 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily YPO0239 IPR006037 Regulator of K+ conductance, C-terminal YPO0239 IPR036291 NAD(P)-binding domain superfamily YPO0240 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO0240 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type YPO0240 IPR006027 NusB/RsmB/TIM44 YPO0240 IPR023541 rRNA small subunit methyltransferase B, enterobacteriaceae YPO0240 IPR035926 NusB-like superfamily YPO0240 IPR004573 rRNA small subunit methyltransferase B YPO0240 IPR023267 RNA (C5-cytosine) methyltransferase YPO0240 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site YPO0241 IPR001555 Phosphoribosylglycinamide formyltransferase, active site YPO0241 IPR036477 Formyl transferase, N-terminal domain superfamily YPO0241 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain YPO0241 IPR002376 Formyl transferase, N-terminal YPO0241 IPR011034 Formyl transferase-like, C-terminal domain superfamily YPO0241 IPR005794 Methionyl-tRNA formyltransferase YPO0241 IPR005793 Formyl transferase, C-terminal YPO0241 IPR037022 Formyl transferase, C-terminal domain superfamily YPO0242 IPR036821 Peptide deformylase superfamily YPO0242 IPR023635 Peptide deformylase YPO0243 IPR003488 DNA recombination-mediator protein A YPO0243 IPR036388 Winged helix-like DNA-binding domain superfamily YPO0243 IPR041614 DprA, winged helix domain YPO0244 IPR007456 Smg YPO0245 IPR013498 DNA topoisomerase, type IA, zn finger YPO0245 IPR000380 DNA topoisomerase, type IA YPO0245a IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily YPO0245a IPR006070 YrdC-like domain YPO0245a IPR023535 Threonylcarbamoyl-AMP synthase YPO0246 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal YPO0246 IPR011342 Shikimate dehydrogenase YPO0246 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase YPO0246 IPR041121 SDH, C-terminal YPO0246 IPR036291 NAD(P)-binding domain superfamily YPO0246 IPR022893 Shikimate dehydrogenase family YPO0247 IPR001451 Hexapeptide repeat YPO0247 IPR011004 Trimeric LpxA-like superfamily YPO0248 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0248 IPR002611 IstB-like ATP-binding protein YPO0248 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO0248 IPR003593 AAA+ ATPase domain YPO0248 IPR001270 ClpA/B family YPO0249 IPR001584 Integrase, catalytic core YPO0249 IPR036397 Ribonuclease H superfamily YPO0249 IPR012337 Ribonuclease H-like superfamily YPO0249 IPR006120 Resolvase, HTH domain YPO0249 IPR017894 HTH domain, IS21 transposase-type YPO0251 IPR014083 Cation/acetate symporter ActP YPO0251 IPR038377 Sodium/glucose symporter superfamily YPO0251 IPR018212 Sodium/solute symporter, conserved site YPO0251 IPR001734 Sodium/solute symporter YPO0252 IPR007436 Protein of unknown function DUF485 YPO0253 IPR011904 Acetate-CoA ligase YPO0253 IPR025110 AMP-binding enzyme, C-terminal domain YPO0253 IPR000873 AMP-dependent synthetase/ligase YPO0253 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain YPO0253 IPR042099 AMP-dependent synthetase-like superfamily YPO0253 IPR020845 AMP-binding, conserved site YPO0254 IPR033380 Glutamate-aspartate symport protein GltP/GltT YPO0254 IPR034703 Proton/glutamate-aspartate symporter GltP YPO0254 IPR001991 Sodium:dicarboxylate symporter YPO0254 IPR036458 Sodium:dicarboxylate symporter superfamily YPO0254 IPR018107 Sodium:dicarboxylate symporter, conserved site YPO0255 IPR016032 Signal transduction response regulator, C-terminal effector YPO0255 IPR000792 Transcription regulator LuxR, C-terminal YPO0255 IPR001789 Signal transduction response regulator, receiver domain YPO0255 IPR011006 CheY-like superfamily YPO0256 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPO0256 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPO0256 IPR019247 Histidine kinase BarA, N-terminal YPO0256 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPO0256 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPO0256 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain YPO0256 IPR003660 HAMP domain YPO0256 IPR011006 CheY-like superfamily YPO0256 IPR001789 Signal transduction response regulator, receiver domain YPO0256 IPR005467 Histidine kinase domain YPO0256 IPR003594 Histidine kinase/HSP90-like ATPase YPO0256 IPR036641 HPT domain superfamily YPO0257 IPR003522 Type III secretion system outer membrane pore YscC/HrcC YPO0257 IPR004846 Type II/III secretion system YPO0257 IPR005644 NolW-like YPO0257 IPR004845 Type II secretion system GspD, conserved site YPO0257 IPR038591 NolW-like superfamily YPO0263 IPR006182 Secretory protein YscJ/FliF YPO0263 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ YPO0266 IPR001712 Type III secretion system FHIPEP YPO0266 IPR042196 FHIPEP, domain 4 YPO0266 IPR042193 FHIPEP, domain 3 YPO0266 IPR006302 Type III secretion protein HrcV YPO0266 IPR025505 FHIPEP conserved site YPO0267 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain YPO0267 IPR040627 T3SS EscN ATPase, C-terminal YPO0267 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0267 IPR013380 ATPase, type III secretion system, H+-transporting YPO0267 IPR005714 ATPase, type III secretion system, FliI/YscN YPO0267 IPR003593 AAA+ ATPase domain YPO0269 IPR001543 Surface presentation of antigen (SpoA) YPO0269 IPR036429 SpoA-like superfamily YPO0269 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO YPO0269 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb YPO0270 IPR005838 Type III secretion system inner membrane P protein YPO0270 IPR005773 Yop virulence translocation protein R YPO0271 IPR006306 Type III secretion protein HrpO YPO0271 IPR002191 Bacterial export protein family 3 YPO0272 IPR006304 Type III secretion protein SpaR/YscT YPO0272 IPR002010 Type III secretion system inner membrane R protein YPO0273 IPR029025 Type III secretion system substrate exporter, C-terminal YPO0273 IPR006307 Type III exporter system, secretion apparatus protein BsaZ YPO0273 IPR006135 Type III secretion system substrate exporter YPO0274 IPR007272 Sulphur transport domain YPO0275 IPR001455 TusA-like domain YPO0275 IPR036868 TusA-like domain superfamily YPO0276 IPR005119 LysR, substrate-binding YPO0276 IPR000847 Transcription regulator HTH, LysR YPO0276 IPR036390 Winged helix DNA-binding domain superfamily YPO0276 IPR036388 Winged helix-like DNA-binding domain superfamily YPO0277 IPR018227 Amino acid/polyamine transporter 2 YPO0278 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme YPO0278 IPR006233 Cystathionine beta-lyase, bacterial YPO0278 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPO0278 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPO0278 IPR015424 Pyridoxal phosphate-dependent transferase YPO0279 IPR003593 AAA+ ATPase domain YPO0279 IPR015863 ABC transporter, hemin import, HmuV YPO0279 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0279 IPR017871 ABC transporter, conserved site YPO0279 IPR003439 ABC transporter-like YPO0280 IPR000522 ABC transporter, permease protein, BtuC-like YPO0280 IPR037294 ABC transporter, BtuC-like YPO0281 IPR002491 ABC transporter periplasmic binding domain YPO0282 IPR007845 Haemin-degrading HemS/ChuX domain YPO0283 IPR012910 TonB-dependent receptor, plug domain YPO0283 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor YPO0283 IPR010916 TonB box, conserved site YPO0283 IPR011276 TonB-dependent haem/haemoglobin receptor YPO0283 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YPO0283 IPR000531 TonB-dependent receptor-like, beta-barrel YPO0283 IPR039426 Vitamin B12 transporter BtuB-like YPO0283 IPR037066 TonB-dependent receptor, plug domain superfamily YPO0284 IPR036291 NAD(P)-binding domain superfamily YPO0284 IPR016040 NAD(P)-binding domain YPO0285 IPR010413 Intracellular heme transport protein HutX-like YPO0286 IPR026332 Anaerobilin synthase HutW YPO0286 IPR034505 Anaerobic coproporphyrinogen-III oxidase YPO0286 IPR006638 Elp3/MiaB/NifB YPO0286 IPR023404 Radical SAM, alpha/beta horseshoe YPO0286 IPR007197 Radical SAM YPO0288 IPR011233 Tellurite/Phi/PacB toxicity protection, TerW YPO0290 IPR028157 PELOTA RNA-binding domain YPO0290 IPR011215 Phosphoribosyl transferase YPO0294 IPR003325 TerD domain YPO0295 IPR017115 Tellurite resistance, TerA YPO0295 IPR003325 TerD domain YPO0296 IPR029024 TerB-like YPO0296 IPR007791 Co-chaperone DjlA, N-terminal YPO0297 IPR022369 Integral membrane protein TerC, riboswitch-linked YPO0297 IPR005496 Integral membrane protein TerC YPO0298 IPR003325 TerD domain YPO0299 IPR003325 TerD domain YPO0300 IPR036515 Transposase IS200-like superfamily YPO0300 IPR002686 Transposase IS200-like YPO0302 IPR000015 Outer membrane usher protein YPO0302 IPR037224 PapC, N-terminal domain superfamily YPO0302 IPR025885 PapC, N-terminal domain YPO0302 IPR042186 Outer membrane usher protein FimD, plug domain YPO0302 IPR025949 PapC-like, C-terminal domain YPO0303 IPR013783 Immunoglobulin-like fold YPO0303 IPR016147 Pili assembly chaperone, N-terminal YPO0303 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YPO0303 IPR008962 PapD-like superfamily YPO0308 IPR006311 Twin-arginine translocation pathway, signal sequence YPO0308 IPR006094 FAD linked oxidase, N-terminal YPO0308 IPR036318 FAD-binding, type PCMH-like superfamily YPO0308 IPR012951 Berberine/berberine-like YPO0308 IPR016166 FAD-binding domain, PCMH-type YPO0309 IPR006315 Outer membrane autotransporter barrel YPO0309 IPR005546 Autotransporter beta-domain YPO0309 IPR036709 Autotransporter beta-domain superfamily YPO0309 IPR013425 Autotransporter-associated beta strand repeat YPO0309 IPR011050 Pectin lyase fold/virulence factor YPO0309 IPR012332 P22 tailspike-like, C-terminal domain superfamily YPO0310 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily YPO0310 IPR007440 Chorismate--pyruvate lyase YPO0311 IPR030470 UbiA prenyltransferase conserved site YPO0311 IPR000537 UbiA prenyltransferase family YPO0311 IPR039653 Prenyltransferase YPO0311 IPR006370 4-hydroxybenzoate polyprenyltransferase-like YPO0312 IPR002123 Phospholipid/glycerol acyltransferase YPO0312 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB YPO0312 IPR041728 GPAT/DHAPAT, acyltransferase domain YPO0312 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase YPO0313 IPR000829 DAGK family YPO0313 IPR036945 Diacylglycerol kinase (DAGK) superfamily YPO0313 IPR033718 Diacylglycerol kinase, prokaryotic YPO0314 IPR039418 LexA-like YPO0314 IPR006200 Transcription regulator LexA YPO0314 IPR015927 Peptidase S24/S26A/S26B/S26C YPO0314 IPR036286 LexA/Signal peptidase-like superfamily YPO0314 IPR006197 Peptidase S24, LexA-like YPO0314 IPR036390 Winged helix DNA-binding domain superfamily YPO0314 IPR036388 Winged helix-like DNA-binding domain superfamily YPO0314 IPR006199 LexA repressor, DNA-binding domain YPO0315 IPR036390 Winged helix DNA-binding domain superfamily YPO0315 IPR036388 Winged helix-like DNA-binding domain superfamily YPO0315 IPR002481 Ferric-uptake regulator YPO0316 IPR013785 Aldolase-type TIM barrel YPO0316 IPR035587 DUS-like, FMN-binding domain YPO0316 IPR018517 tRNA-dihydrouridine synthase, conserved site YPO0316 IPR001269 tRNA-dihydrouridine synthase YPO0316 IPR004653 tRNA-dihydrouridine(20/20a) synthase YPO0318 IPR014318 Phage shock protein, PspG YPO0319 IPR020843 Polyketide synthase, enoylreductase domain YPO0319 IPR036291 NAD(P)-binding domain superfamily YPO0319 IPR011032 GroES-like superfamily YPO0319 IPR013154 Alcohol dehydrogenase, N-terminal YPO0319 IPR013149 Alcohol dehydrogenase, C-terminal YPO0319 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site YPO0320 IPR007693 DNA helicase, DnaB-like, N-terminal YPO0320 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal YPO0320 IPR007692 DNA helicase, DnaB type YPO0320 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily YPO0320 IPR003593 AAA+ ATPase domain YPO0320 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0320 IPR007694 DNA helicase, DnaB-like, C-terminal YPO0321 IPR029066 PLP-binding barrel YPO0321 IPR001608 Alanine racemase, N-terminal YPO0321 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal YPO0321 IPR011079 Alanine racemase, C-terminal YPO0321 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site YPO0321 IPR000821 Alanine racemase YPO0322 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site YPO0322 IPR000796 Aspartate/other aminotransferase YPO0322 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPO0322 IPR004839 Aminotransferase, class I/classII YPO0322 IPR015424 Pyridoxal phosphate-dependent transferase YPO0322 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPO0323 IPR038056 YjbR-like superfamily YPO0323 IPR007351 Uncharacterised protein YjbR YPO0324 IPR041102 UvrA, interaction domain YPO0324 IPR004602 UvrABC system subunit A YPO0324 IPR041552 UvrA DNA-binding domain YPO0324 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0324 IPR017871 ABC transporter, conserved site YPO0324 IPR003439 ABC transporter-like YPO0325 IPR000424 Primosome PriB/single-strand DNA-binding YPO0325 IPR011344 Single-stranded DNA-binding protein YPO0325 IPR012340 Nucleic acid-binding, OB-fold YPO0326 IPR011008 Dimeric alpha-beta barrel YPO0326 IPR013448 L-rhamnose mutarotase YPO0326 IPR008000 Rhamnose/fucose mutarotase YPO0327 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA YPO0327 IPR018211 Alcohol dehydrogenase, iron-type, conserved site YPO0327 IPR039697 Iron-type alcohol dehydrogenase-like YPO0328 IPR013447 Rhamnulose-1-phosphate aldolase YPO0328 IPR001303 Class II aldolase/adducin N-terminal YPO0328 IPR036409 Class II aldolase/adducin N-terminal domain superfamily YPO0329 IPR036237 Xylose isomerase-like superfamily YPO0329 IPR009308 Rhamnose isomerase YPO0330 IPR013449 Rhamnulokinase YPO0330 IPR000577 Carbohydrate kinase, FGGY YPO0330 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPO0330 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPO0332 IPR018060 DNA binding HTH domain, AraC-type YPO0332 IPR023609 Transcription regulator HTH, RhaS YPO0332 IPR020449 Transcription regulator HTH, AraC- type YPO0332 IPR014710 RmlC-like jelly roll fold YPO0332 IPR037923 Transcription regulator HTH-like YPO0332 IPR009057 Homeobox-like domain superfamily YPO0332 IPR003313 AraC-type arabinose-binding/dimerisation domain YPO0333 IPR009057 Homeobox-like domain superfamily YPO0333 IPR018060 DNA binding HTH domain, AraC-type YPO0333 IPR018062 HTH domain AraC-type, conserved site YPO0333 IPR014710 RmlC-like jelly roll fold YPO0333 IPR011051 RmlC-like cupin domain superfamily YPO0333 IPR023699 Transcription activator HTH, RhaR YPO0333 IPR003313 AraC-type arabinose-binding/dimerisation domain YPO0333 IPR020449 Transcription regulator HTH, AraC- type YPO0334 IPR004673 L-rhamnose-proton symport, RhaT YPO0337 IPR008992 Enterotoxin YPO0341 IPR001647 DNA-binding HTH domain, TetR-type YPO0341 IPR009057 Homeobox-like domain superfamily YPO0341 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily YPO0342 IPR023753 FAD/NAD(P)-binding domain YPO0342 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 YPO0342 IPR028261 Dihydroprymidine dehydrogenase domain II YPO0342 IPR009051 Alpha-helical ferredoxin YPO0342 IPR036188 FAD/NAD(P)-binding domain superfamily YPO0342 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO0342 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPO0343 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPO0343 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO0344 IPR009010 Aspartate decarboxylase-like domain superfamily YPO0344 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain YPO0344 IPR006656 Molybdopterin oxidoreductase YPO0344 IPR006657 Molybdopterin dinucleotide-binding domain YPO0344 IPR006478 Formate dehydrogenase, alpha subunit YPO0344 IPR041924 Formate dehydrogenase H, N-terminal YPO0344 IPR041925 Formate dehydrogenase H, molybdopterin-binding domain YPO0344 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site YPO0344 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site YPO0345 IPR003834 Cytochrome C biogenesis protein, transmembrane domain YPO0345 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily YPO0345 IPR022910 Thiol:disulphide interchange protein DsbD YPO0345 IPR036249 Thioredoxin-like superfamily YPO0345 IPR017937 Thioredoxin, conserved site YPO0345 IPR013766 Thioredoxin domain YPO0345 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain YPO0345 IPR035671 DsbD gamma YPO0346 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal YPO0346 IPR023700 Divalent cation tolerance protein CutA, Enterobacteria YPO0346 IPR004323 Divalent ion tolerance protein, CutA YPO0346 IPR011322 Nitrogen regulatory PII-like, alpha/beta YPO0347 IPR004668 Anaerobic c4-dicarboxylate membrane transporter YPO0348 IPR008948 L-Aspartase-like YPO0348 IPR004708 Aspartate ammonia-lyase YPO0348 IPR024083 Fumarase/histidase, N-terminal YPO0348 IPR022761 Fumarate lyase, N-terminal YPO0348 IPR000362 Fumarate lyase family YPO0348 IPR020557 Fumarate lyase, conserved site YPO0348 IPR018951 Fumarase C, C-terminal YPO0349 IPR007313 FxsA cytoplasmic membrane protein YPO0350 IPR020818 GroES chaperonin family YPO0350 IPR037124 GroES chaperonin superfamily YPO0350 IPR011032 GroES-like superfamily YPO0350 IPR018369 Chaperonin GroES, conserved site YPO0351 IPR018370 Chaperonin Cpn60, conserved site YPO0351 IPR027409 GroEL-like apical domain superfamily YPO0351 IPR027413 GroEL-like equatorial domain superfamily YPO0351 IPR027410 TCP-1-like chaperonin intermediate domain superfamily YPO0351 IPR001844 Chaperonin Cpn60 YPO0351 IPR002423 Chaperonin Cpn60/TCP-1 family YPO0352 IPR025294 Protein of unknown function DUF4156 YPO0353 IPR022462 Lysine-2,3-aminomutase-like YPO0353 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase YPO0353 IPR013785 Aldolase-type TIM barrel YPO0353 IPR007197 Radical SAM YPO0354 IPR020599 Translation elongation factor P/YeiP YPO0354 IPR008991 Translation protein SH3-like domain superfamily YPO0354 IPR011768 Translation elongation factor P YPO0354 IPR013852 Translation elongation factor P/YeiP, conserved site YPO0354 IPR001059 Translation elongation factor P/YeiP, central YPO0354 IPR013185 Translation elongation factor, KOW-like YPO0354 IPR014722 Ribosomal protein L2, domain 2 YPO0354 IPR012340 Nucleic acid-binding, OB-fold YPO0354 IPR015365 Elongation factor P, C-terminal YPO0355 IPR000390 Small multidrug resistance protein family YPO0356 IPR036515 Transposase IS200-like superfamily YPO0356 IPR002686 Transposase IS200-like YPO0357 IPR003418 Fumarate reductase, subunit D YPO0357 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit YPO0358 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit YPO0358 IPR003510 Fumarate reductase, subunit C YPO0359 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain YPO0359 IPR036010 2Fe-2S ferredoxin-like superfamily YPO0359 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site YPO0359 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal YPO0359 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein YPO0359 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPO0359 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO0359 IPR012675 Beta-grasp domain superfamily YPO0359 IPR009051 Alpha-helical ferredoxin YPO0360 IPR036188 FAD/NAD(P)-binding domain superfamily YPO0360 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site YPO0360 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit YPO0360 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily YPO0360 IPR005884 Fumarate reductase, flavoprotein subunit YPO0360 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain YPO0360 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily YPO0360 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal YPO0362 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) YPO0362 IPR006195 Aminoacyl-tRNA synthetase, class II YPO0362 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal YPO0362 IPR004525 Elongation factor P--(R)-beta-lysine ligase YPO0363 IPR023408 Mechanosensitive ion channel MscS domain superfamily YPO0363 IPR010920 LSM domain superfamily YPO0363 IPR011066 Mechanosensitive ion channel MscS, C-terminal YPO0363 IPR006685 Mechanosensitive ion channel MscS YPO0363 IPR025692 Mechanosensitive ion channel inner membrane domain 1 YPO0363 IPR006686 Mechanosensitive ion channel MscS, conserved site YPO0363 IPR024393 Mechanosensitive ion channel MscS, porin domain YPO0363 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 YPO0364 IPR003817 Phosphatidylserine decarboxylase-related YPO0364 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 YPO0364 IPR033177 Phosphatidylserine decarboxylase YPO0365 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0365 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain YPO0365 IPR010914 RsgA GTPase domain YPO0365 IPR004881 Ribosome biogenesis GTPase RsgA YPO0366 IPR013520 Exonuclease, RNase T/DNA polymerase III YPO0366 IPR022894 Oligoribonuclease YPO0366 IPR036397 Ribonuclease H superfamily YPO0366 IPR012337 Ribonuclease H-like superfamily YPO0367 IPR009051 Alpha-helical ferredoxin YPO0367 IPR004453 Epoxyqueuosine reductase QueG YPO0367 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPO0367 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO0367 IPR013542 Domain of unknown function DUF1730 YPO0368 IPR017953 Carbohydrate kinase, predicted, conserved site YPO0368 IPR004443 YjeF N-terminal domain YPO0368 IPR029056 Ribokinase-like YPO0368 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr YPO0368 IPR036652 YjeF N-terminal domain superfamily YPO0368 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase YPO0369 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE YPO0369 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0370 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain YPO0371 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPO0371 IPR020667 DNA mismatch repair protein, MutL YPO0371 IPR014762 DNA mismatch repair, conserved site YPO0371 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms YPO0371 IPR013507 DNA mismatch repair protein, S5 domain 2-like YPO0371 IPR037198 MutL, C-terminal domain superfamily YPO0371 IPR020568 Ribosomal protein S5 domain 2-type fold YPO0371 IPR042120 MutL, C-terminal domain, dimerisation subdomain YPO0371 IPR042121 MutL, C-terminal domain, regulatory subdomain YPO0371 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPO0371 IPR014790 MutL, C-terminal, dimerisation YPO0371 IPR002099 DNA mismatch repair protein family, N-terminal YPO0372 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0372 IPR018022 IPP transferase YPO0372 IPR039657 Dimethylallyltransferase YPO0373 IPR010920 LSM domain superfamily YPO0373 IPR005001 RNA-binding protein Hfq YPO0374 IPR042108 GTPase HflX, N-terminal domain superfamily YPO0374 IPR006073 GTP binding domain YPO0374 IPR032305 GTP-binding protein, middle domain YPO0374 IPR035647 EF-G domain III/V-like YPO0374 IPR025121 GTPase HflX, N-terminal YPO0374 IPR030394 HflX-type guanine nucleotide-binding (G) domain YPO0374 IPR016496 GTPase HflX YPO0374 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0375 IPR001972 Stomatin family YPO0375 IPR020980 Menbrane protein HflK, N-terminal YPO0375 IPR001107 Band 7 domain YPO0375 IPR010201 HflK YPO0375 IPR036013 Band 7/SPFH domain superfamily YPO0376 IPR036013 Band 7/SPFH domain superfamily YPO0376 IPR010200 HflC YPO0376 IPR001107 Band 7 domain YPO0377 IPR019201 Protein of unknown function DUF2065 YPO0378 IPR018220 Adenylosuccinate synthase, GTP-binding site YPO0378 IPR042110 Adenylosuccinate synthetase, domain 2 YPO0378 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0378 IPR042111 Adenylosuccinate synthetase, domain 3 YPO0378 IPR001114 Adenylosuccinate synthetase YPO0378 IPR033128 Adenylosuccinate synthase, active site YPO0378 IPR042109 Adenylosuccinate synthetase, domain 1 YPO0379 IPR023761 Transcriptional repressor HTH, NsrR YPO0379 IPR000944 Transcription regulator Rrf2-type YPO0379 IPR036388 Winged helix-like DNA-binding domain superfamily YPO0379 IPR030489 Transcription regulator Rrf2-type, conserved site YPO0379 IPR036390 Winged helix DNA-binding domain superfamily YPO0380 IPR040476 RNase II/RNase R, cold shock domain YPO0380 IPR011805 Ribonuclease R YPO0380 IPR013668 Ribonuclease R winged-helix domain YPO0380 IPR022967 RNA-binding domain, S1 YPO0380 IPR003029 S1 domain YPO0380 IPR004476 Ribonuclease II/ribonuclease R YPO0380 IPR001900 Ribonuclease II/R YPO0380 IPR013223 Ribonuclease B, N-terminal OB domain YPO0380 IPR011129 Cold shock domain YPO0380 IPR022966 Ribonuclease II/R, conserved site YPO0380 IPR012340 Nucleic acid-binding, OB-fold YPO0381 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPO0381 IPR013123 RNA 2-O ribose methyltransferase, substrate binding YPO0381 IPR029064 50S ribosomal protein L30e-like YPO0381 IPR001537 tRNA/rRNA methyltransferase, SpoU type YPO0381 IPR004441 RNA methyltransferase TrmH family YPO0381 IPR029028 Alpha/beta knot methyltransferases YPO0381 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB YPO0383 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain YPO0383 IPR006089 Acyl-CoA dehydrogenase, conserved site YPO0383 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal YPO0383 IPR041504 Adaptive response protein AidB, N-terminal YPO0383 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily YPO0383 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal YPO0383 IPR034184 Putative acyl-CoA dehydrogenase AidB YPO0384 IPR010854 Domain of unknown function DUF1471 YPO0384 IPR036275 YdgH-like superfamily YPO0384 IPR025543 Dodecin-like YPO0385 IPR001270 ClpA/B family YPO0385 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO0385 IPR002611 IstB-like ATP-binding protein YPO0385 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0385 IPR003593 AAA+ ATPase domain YPO0386 IPR006120 Resolvase, HTH domain YPO0386 IPR001584 Integrase, catalytic core YPO0386 IPR012337 Ribonuclease H-like superfamily YPO0386 IPR036397 Ribonuclease H superfamily YPO0386 IPR017894 HTH domain, IS21 transposase-type YPO0387 IPR003593 AAA+ ATPase domain YPO0387 IPR011704 ATPase, dynein-related, AAA domain YPO0387 IPR021961 Protein of unknown function DUF3578 YPO0387 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0391 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site YPO0391 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO0391 IPR002941 DNA methylase N-4/N-6 YPO0392a IPR002514 Transposase IS3/IS911family YPO0392a IPR009057 Homeobox-like domain superfamily YPO0396 IPR001584 Integrase, catalytic core YPO0396 IPR012337 Ribonuclease H-like superfamily YPO0396 IPR017894 HTH domain, IS21 transposase-type YPO0399 IPR010295 Protein of unknown function DUF898 YPO0401 IPR009057 Homeobox-like domain superfamily YPO0401 IPR018060 DNA binding HTH domain, AraC-type YPO0401 IPR018062 HTH domain AraC-type, conserved site YPO0401 IPR020449 Transcription regulator HTH, AraC- type YPO0402 IPR013011 Phosphotransferase system, EIIB component, type 2 YPO0402 IPR003501 Phosphotransferase system, EIIB component, type 2/3 YPO0402 IPR036095 PTS system IIB component-like superfamily YPO0402 IPR003353 Phosphotransferase system, fructose-specific IIB subunit YPO0403 IPR036095 PTS system IIB component-like superfamily YPO0403 IPR003353 Phosphotransferase system, fructose-specific IIB subunit YPO0403 IPR003501 Phosphotransferase system, EIIB component, type 2/3 YPO0403 IPR013011 Phosphotransferase system, EIIB component, type 2 YPO0404 IPR013014 Phosphotransferase system, EIIC component, type 2 YPO0404 IPR006327 Phosphotransferase system, fructose IIC component YPO0405 IPR000032 Phosphocarrier protein HPr-like YPO0405 IPR023151 PEP-utilising enzyme, conserved site YPO0405 IPR036637 Phosphohistidine domain superfamily YPO0405 IPR016152 Phosphotransferase/anion transporter YPO0405 IPR006318 Phosphotransferase system, enzyme I-like YPO0405 IPR002178 PTS EIIA type-2 domain YPO0405 IPR036618 PtsI, HPr-binding domain superfamily YPO0405 IPR040442 Pyruvate kinase-like domain superfamily YPO0405 IPR035895 HPr-like superfamily YPO0405 IPR008279 PEP-utilising enzyme, mobile domain YPO0405 IPR018274 PEP-utilising enzyme, active site YPO0405 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily YPO0405 IPR000121 PEP-utilising enzyme, C-terminal YPO0405 IPR008731 Phosphotransferase system, enzyme I N-terminal YPO0405 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site YPO0406 IPR019637 Protein of unknown function DUF2501 YPO0407 IPR011008 Dimeric alpha-beta barrel YPO0407 IPR007138 Antibiotic biosynthesis monooxygenase domain YPO0407 IPR033672 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase YPO0408 IPR013785 Aldolase-type TIM barrel YPO0408 IPR033673 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase YPO0408 IPR002915 DeoC/FbaB/ lacD aldolase YPO0408 IPR041720 Aldolase FbaB-like, archaeal-type YPO0409 IPR025997 Periplasmic binding protein YPO0409 IPR028082 Periplasmic binding protein-like I YPO0409 IPR030159 Autoinducer 2 ABC transporter, substrate-binding protein LsrB YPO0410 IPR001851 ABC transporter, permease YPO0411 IPR001851 ABC transporter, permease YPO0412 IPR017871 ABC transporter, conserved site YPO0412 IPR003439 ABC transporter-like YPO0412 IPR003593 AAA+ ATPase domain YPO0412 IPR030281 Autoinducer 2 import ATP-binding protein LsrA YPO0412 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0415 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPO0415 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPO0415 IPR033676 Autoinducer-2 kinase YPO0415 IPR000577 Carbohydrate kinase, FGGY YPO0416 IPR002201 Glycosyl transferase, family 9 YPO0416 IPR011916 Lipopolysaccharide heptosyltransferase III, putative YPO0420 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPO0420 IPR006143 RND efflux pump, membrane fusion protein YPO0421 IPR001036 Acriflavin resistance protein YPO0421 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPO0424 IPR012334 Pectin lyase fold YPO0424 IPR000070 Pectinesterase, catalytic YPO0424 IPR011050 Pectin lyase fold/virulence factor YPO0424 IPR033131 Pectinesterase, Asp active site YPO0425 IPR000160 GGDEF domain YPO0425 IPR029787 Nucleotide cyclase YPO0426 IPR009885 Protein of unknown function DUF1435 YPO0427 IPR013675 Methyltransferase small, N-terminal YPO0427 IPR023543 rRNA small subunit methyltransferase C YPO0427 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO0427 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPO0427 IPR007848 Methyltransferase small domain YPO0428 IPR018382 DNA polymerase III, psi subunit, subgroup YPO0428 IPR004615 DNA polymerase III, psi subunit YPO0428 IPR036654 DNA polymerase III, psi subunit superfamily YPO0429 IPR006464 N-acetyltransferase RimI/Ard1 YPO0429 IPR000182 GNAT domain YPO0429 IPR016181 Acyl-CoA N-acyltransferase YPO0430 IPR032090 Peptide chain release factor 3, C-terminal YPO0430 IPR004548 Peptide chain release factor 3 YPO0430 IPR035647 EF-G domain III/V-like YPO0430 IPR009000 Translation protein, beta-barrel domain superfamily YPO0430 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily YPO0430 IPR041732 Peptide chain release factor 3, GTP-binding domain YPO0430 IPR005225 Small GTP-binding protein domain YPO0430 IPR000795 Transcription factor, GTP-binding domain YPO0430 IPR004161 Translation elongation factor EFTu-like, domain 2 YPO0430 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0430 IPR031157 Tr-type G domain, conserved site YPO0431 IPR007055 BON domain YPO0431 IPR014004 Transport-associated and nodulation domain, bacteria YPO0432 IPR009760 Protein of unknown function DUF1328 YPO0433 IPR037483 YjjU-like YPO0433 IPR002641 Patatin-like phospholipase domain YPO0433 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase YPO0434 IPR001130 TatD family YPO0434 IPR018228 Deoxyribonuclease, TatD-related, conserved site YPO0434 IPR032466 Metal-dependent hydrolase YPO0435 IPR008276 Concentrative nucleoside transporter YPO0435 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial YPO0435 IPR002668 Concentrative nucleoside transporter N-terminal domain YPO0435 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain YPO0435 IPR011657 Concentrative nucleoside transporter C-terminal domain YPO0436 IPR002915 DeoC/FbaB/ lacD aldolase YPO0436 IPR023649 Deoxyribose-phosphate aldolase type II YPO0436 IPR011343 Deoxyribose-phosphate aldolase YPO0436 IPR013785 Aldolase-type TIM barrel YPO0439 IPR017850 Alkaline-phosphatase-like, core domain superfamily YPO0439 IPR010045 Phosphopentomutase YPO0439 IPR024052 Phosphopentomutase DeoB cap domain superfamily YPO0439 IPR006124 Metalloenzyme YPO0440 IPR004402 Purine nucleoside phosphorylase DeoD-type YPO0440 IPR018016 Nucleoside phosphorylase, conserved site YPO0440 IPR000845 Nucleoside phosphorylase domain YPO0440 IPR035994 Nucleoside phosphorylase superfamily YPO0441 IPR019305 Uncharacterised protein family Smp YPO0442 IPR023190 Phosphoserine phosphatase, domain 2 YPO0442 IPR041449 Phosphoserine phosphatase, N-terminal YPO0442 IPR036412 HAD-like superfamily YPO0442 IPR023214 HAD superfamily YPO0443 IPR004504 DNA repair protein RadA YPO0443 IPR041166 LapB, rubredoxin metal binding domain YPO0443 IPR003593 AAA+ ATPase domain YPO0443 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain YPO0443 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPO0443 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0443 IPR020568 Ribosomal protein S5 domain 2-type fold YPO0444 IPR004821 Cytidyltransferase-like domain YPO0444 IPR001387 Cro/C1-type helix-turn-helix domain YPO0444 IPR041749 NadR, nicotinamide/nicotinate mononucleotide adenylyltransferase domain YPO0444 IPR006417 Nicotinamide-nucleotide adenylyltransferase YPO0444 IPR016429 NAD biosynthesis/regulator protein NadR YPO0444 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPO0444 IPR038727 NadR/Ttd14, AAA domain YPO0444 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO0444 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0445 IPR032675 Leucine-rich repeat domain superfamily YPO0445 IPR003591 Leucine-rich repeat, typical subtype YPO0445 IPR003812 Fido domain YPO0445 IPR036597 Fido-like domain superfamily YPO0448 IPR006664 Outer membrane protein, bacterial YPO0448 IPR006665 OmpA-like domain YPO0448 IPR036737 OmpA-like domain superfamily YPO0449 IPR033417 Periplasmic sensor domain CHASE8 YPO0449 IPR000160 GGDEF domain YPO0449 IPR003660 HAMP domain YPO0449 IPR029787 Nucleotide cyclase YPO0451 IPR004014 Cation-transporting P-type ATPase, N-terminal YPO0451 IPR023299 P-type ATPase, cytoplasmic domain N YPO0451 IPR018303 P-type ATPase, phosphorylation site YPO0451 IPR023298 P-type ATPase, transmembrane domain superfamily YPO0451 IPR008250 P-type ATPase, A domain superfamily YPO0451 IPR036412 HAD-like superfamily YPO0451 IPR006068 Cation-transporting P-type ATPase, C-terminal YPO0451 IPR023214 HAD superfamily YPO0451 IPR001757 P-type ATPase YPO0452 IPR023346 Lysozyme-like domain superfamily YPO0452 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily YPO0452 IPR012289 Lytic transglycosylase, superhelical linker YPO0452 IPR008939 Lytic transglycosylase, superhelical U-shaped YPO0452 IPR000189 Prokaryotic transglycosylase, active site YPO0452 IPR008258 Transglycosylase SLT domain 1 YPO0453 IPR000831 Trp repressor YPO0453 IPR013335 Trp repressor, bacterial YPO0453 IPR010921 Trp repressor/replication initiator YPO0453 IPR038116 TrpR-like superfamily YPO0454 IPR029001 Inosine triphosphate pyrophosphatase-like YPO0454 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 YPO0454 IPR002786 Inosine/xanthosine triphosphatase YPO0455 IPR023086 Phosphoglycerate mutase, GpmB, probable YPO0455 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site YPO0455 IPR029033 Histidine phosphatase superfamily YPO0455 IPR013078 Histidine phosphatase superfamily, clade-1 YPO0456 IPR009057 Homeobox-like domain superfamily YPO0456 IPR018060 DNA binding HTH domain, AraC-type YPO0456 IPR018062 HTH domain AraC-type, conserved site YPO0456 IPR010499 Bacterial transcription activator, effector binding YPO0456 IPR020449 Transcription regulator HTH, AraC- type YPO0456 IPR029442 GyrI-like small molecule binding domain YPO0456 IPR011256 Regulatory factor, effector binding domain superfamily YPO0457 IPR010292 Uncharacterised protein family CreA YPO0458 IPR011006 CheY-like superfamily YPO0458 IPR001867 OmpR/PhoB-type DNA-binding domain YPO0458 IPR039420 Transcriptional regulatory protein WalR-like YPO0458 IPR001789 Signal transduction response regulator, receiver domain YPO0458 IPR016032 Signal transduction response regulator, C-terminal effector YPO0458 IPR036388 Winged helix-like DNA-binding domain superfamily YPO0459 IPR001341 Aspartate kinase YPO0459 IPR019811 Homoserine dehydrogenase, conserved site YPO0459 IPR002912 ACT domain YPO0459 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain YPO0459 IPR001048 Aspartate/glutamate/uridylate kinase YPO0459 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding YPO0459 IPR036291 NAD(P)-binding domain superfamily YPO0459 IPR036393 Acetylglutamate kinase-like superfamily YPO0459 IPR027795 CASTOR, ACT domain YPO0459 IPR018042 Aspartate kinase, conserved site YPO0459 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I YPO0459 IPR001342 Homoserine dehydrogenase, catalytic YPO0460 IPR036554 GHMP kinase, C-terminal domain superfamily YPO0460 IPR020568 Ribosomal protein S5 domain 2-type fold YPO0460 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPO0460 IPR000870 Homoserine kinase YPO0460 IPR006204 GHMP kinase N-terminal domain YPO0460 IPR013750 GHMP kinase, C-terminal domain YPO0460 IPR006203 GHMP kinase, ATP-binding, conserved site YPO0461 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPO0461 IPR001926 Pyridoxal-phosphate dependent enzyme YPO0461 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site YPO0461 IPR037158 Threonine synthase, N-terminal domain superfamily YPO0461 IPR004450 Threonine synthase-like YPO0461 IPR029144 Threonine synthase, N-terminal YPO0462 IPR005583 Peroxide stress protein YaaA YPO0463 IPR001585 Transaldolase/Fructose-6-phosphate aldolase YPO0463 IPR018225 Transaldolase, active site YPO0463 IPR004730 Transaldolase type 1 YPO0463 IPR013785 Aldolase-type TIM barrel YPO0464 IPR036425 MoaB/Mog-like domain superfamily YPO0464 IPR001453 MoaB/Mog domain YPO0464 IPR008284 Molybdenum cofactor biosynthesis, conserved site YPO0465 IPR020846 Major facilitator superfamily domain YPO0465 IPR011701 Major facilitator superfamily YPO0465 IPR005829 Sugar transporter, conserved site YPO0465 IPR036259 MFS transporter superfamily YPO0467 IPR000791 Acetate transporter GPR1/FUN34/SatP family YPO0468 IPR012725 Chaperone DnaK YPO0468 IPR018181 Heat shock protein 70, conserved site YPO0468 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily YPO0468 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily YPO0468 IPR013126 Heat shock protein 70 family YPO0469 IPR002939 Chaperone DnaJ, C-terminal YPO0469 IPR012724 Chaperone DnaJ YPO0469 IPR036869 Chaperone J-domain superfamily YPO0469 IPR001623 DnaJ domain YPO0469 IPR018253 DnaJ domain, conserved site YPO0469 IPR008971 HSP40/DnaJ peptide-binding YPO0469 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily YPO0469 IPR001305 Heat shock protein DnaJ, cysteine-rich domain YPO0470 IPR004670 Na+/H+ antiporter NhaA YPO0470 IPR023171 Na/H antiporter domain superfamily YPO0471 IPR036390 Winged helix DNA-binding domain superfamily YPO0471 IPR000847 Transcription regulator HTH, LysR YPO0471 IPR036388 Winged helix-like DNA-binding domain superfamily YPO0471 IPR005119 LysR, substrate-binding YPO0472 IPR036510 Ribosomal protein S20 superfamily YPO0472 IPR002583 Ribosomal protein S20 YPO0474 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO0474 IPR002606 Riboflavin kinase, bacterial YPO0474 IPR023468 Riboflavin kinase YPO0474 IPR015864 FAD synthetase YPO0474 IPR023465 Riboflavin kinase domain superfamily YPO0474 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic YPO0475 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPO0475 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding YPO0475 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO0475 IPR002300 Aminoacyl-tRNA synthetase, class Ia YPO0475 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain YPO0475 IPR002301 Isoleucine-tRNA ligase YPO0475 IPR023585 Isoleucine-tRNA ligase, type 1 YPO0475 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain YPO0475 IPR010663 Zinc finger, FPG/IleRS-type YPO0475 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding YPO0476 IPR001872 Peptidase A8, signal peptidase II YPO0476a IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain YPO0477 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YPO0479 IPR036515 Transposase IS200-like superfamily YPO0479 IPR002686 Transposase IS200-like YPO0480 IPR000846 Dihydrodipicolinate reductase, N-terminal YPO0480 IPR022664 Dihydrodipicolinate reductase, conserved site YPO0480 IPR022663 Dihydrodipicolinate reductase, C-terminal YPO0480 IPR036291 NAD(P)-binding domain superfamily YPO0480 IPR023940 Dihydrodipicolinate reductase YPO0481 IPR006274 Carbamoyl-phosphate synthase, small subunit YPO0481 IPR017926 Glutamine amidotransferase YPO0481 IPR029062 Class I glutamine amidotransferase-like YPO0481 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily YPO0481 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain YPO0481 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain YPO0482 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain YPO0482 IPR011607 Methylglyoxal synthase-like domain YPO0482 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain YPO0482 IPR006275 Carbamoyl-phosphate synthase, large subunit YPO0482 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain YPO0482 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily YPO0482 IPR016185 Pre-ATP-grasp domain superfamily YPO0482 IPR011761 ATP-grasp fold YPO0482 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain YPO0482 IPR036914 Methylglyoxal synthase-like domain superfamily YPO0483 IPR001123 Amino acid exporter protein, LeuE-type YPO0483 IPR004778 Homoserine/Threonine efflux protein YPO0484 IPR010619 Putative threonine/serine exporter YPO0485 IPR020914 Uncharacterised protein family UPF0442 YPO0485 IPR024528 Threonine/Serine exporter, ThrE YPO0486 IPR017925 Dihydrofolate reductase conserved site YPO0486 IPR012259 Dihydrofolate reductase YPO0486 IPR024072 Dihydrofolate reductase-like domain superfamily YPO0486 IPR001796 Dihydrofolate reductase domain YPO0487 IPR036515 Transposase IS200-like superfamily YPO0487 IPR002686 Transposase IS200-like YPO0490 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YPO0490 IPR029052 Metallo-dependent phosphatase-like YPO0490 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type YPO0491 IPR036767 ApaG domain superfamily YPO0491 IPR007474 ApaG domain YPO0491 IPR023065 Uncharacterised protein family ApaG YPO0492 IPR011530 Ribosomal RNA adenine dimethylase YPO0492 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal YPO0492 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site YPO0492 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm YPO0492 IPR023165 rRNA adenine dimethylase-like YPO0492 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO0493 IPR005255 PdxA family YPO0493 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase YPO0494 IPR027304 Trigger factor/SurA domain superfamily YPO0494 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type YPO0494 IPR023034 Peptidyl-prolyl isomerase SurA YPO0494 IPR015391 SurA N-terminal YPO0495 IPR005653 Organic solvent tolerance-like, N-terminal YPO0495 IPR020889 LPS-assembly protein LptD YPO0495 IPR007543 LptD, C-terminal YPO0496 IPR029024 TerB-like YPO0496 IPR007791 Co-chaperone DjlA, N-terminal YPO0496 IPR023749 Co-chaperone DjlA YPO0496 IPR001623 DnaJ domain YPO0496 IPR036869 Chaperone J-domain superfamily YPO0497 IPR020103 Pseudouridine synthase, catalytic domain superfamily YPO0497 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site YPO0497 IPR006145 Pseudouridine synthase, RsuA/RluA YPO0500 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 YPO0501 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath YPO0504 IPR010272 Type VI secretion system, TssF-like YPO0506 IPR041546 ClpA/ClpB, AAA lid domain YPO0506 IPR004176 Clp, N-terminal YPO0506 IPR003593 AAA+ ATPase domain YPO0506 IPR036628 Clp, N-terminal domain superfamily YPO0506 IPR017729 Type VI secretion system, ATPase ClpV1 YPO0506 IPR003959 ATPase, AAA-type, core YPO0506 IPR019489 Clp ATPase, C-terminal YPO0506 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0506 IPR001270 ClpA/B family YPO0506 IPR018368 ClpA/B, conserved site 1 YPO0507 IPR037026 Vgr protein, OB-fold domain superfamily YPO0507 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPO0507 IPR006531 Gp5 N-terminal YPO0507 IPR010609 Gp5, C-terminal YPO0507 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPO0513 IPR010263 Type VI secretion protein, VC_A0114 YPO0514 IPR036737 OmpA-like domain superfamily YPO0514 IPR006690 Outer membrane protein, OmpA-like, conserved site YPO0514 IPR006665 OmpA-like domain YPO0514 IPR006664 Outer membrane protein, bacterial YPO0514 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YPO0514 IPR008722 Outer membrane porin F, N-terminal YPO0515 IPR009612 IcmF-related YPO0515 IPR010623 Type VI secretion system IcmF, C-terminal YPO0515 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0515 IPR017731 Type VI secretion system, IcmF YPO0515 IPR025743 IcmF-related, N-terminal domain YPO0517 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPO0517 IPR040766 RapA, N-terminal Tudor-like domain 2 YPO0517 IPR040765 RapA, N-terminal Tudor like domain 1 YPO0517 IPR001650 Helicase, C-terminal YPO0517 IPR000330 SNF2-related, N-terminal domain YPO0517 IPR038718 SNF2-like, N-terminal domain superfamily YPO0517 IPR023949 RNA polymerase-associated protein RapA YPO0517 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0517 IPR022737 RNA polymerase recycling, bacterial, C-terminal YPO0518 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain YPO0518 IPR036397 Ribonuclease H superfamily YPO0518 IPR012337 Ribonuclease H-like superfamily YPO0518 IPR023211 DNA polymerase, palm domain superfamily YPO0518 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain YPO0518 IPR017964 DNA-directed DNA polymerase, family B, conserved site YPO0518 IPR006172 DNA-directed DNA polymerase, family B YPO0518 IPR042087 DNA polymerase family B, C-terminal domain YPO0519 IPR032818 DedA family YPO0519 IPR032816 SNARE associated Golgi protein YPO0520 IPR003593 AAA+ ATPase domain YPO0520 IPR003439 ABC transporter-like YPO0520 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0520 IPR017871 ABC transporter, conserved site YPO0520 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ YPO0521 IPR005947 Thiamine ABC transporter, permease protein YPO0521 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO0521 IPR035906 MetI-like superfamily YPO0522 IPR006061 Solute-binding family 1, conserved site YPO0522 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter YPO0522 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria YPO0524 IPR036390 Winged helix DNA-binding domain superfamily YPO0524 IPR023767 Transcriptional regulator SgrR YPO0524 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain YPO0524 IPR000914 Solute-binding protein family 5 domain YPO0524 IPR039424 Solute-binding protein family 5 YPO0527 IPR002611 IstB-like ATP-binding protein YPO0527 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO0527 IPR001270 ClpA/B family YPO0527 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0527 IPR003593 AAA+ ATPase domain YPO0528 IPR006120 Resolvase, HTH domain YPO0528 IPR036397 Ribonuclease H superfamily YPO0528 IPR017894 HTH domain, IS21 transposase-type YPO0528 IPR001584 Integrase, catalytic core YPO0528 IPR012337 Ribonuclease H-like superfamily YPO0530 IPR033940 3-isopropylmalate dehydratase, swivel domain YPO0530 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain YPO0530 IPR004431 3-isopropylmalate dehydratase, small subunit YPO0530 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YPO0531 IPR036008 Aconitase, iron-sulfur domain YPO0531 IPR018136 Aconitase family, 4Fe-4S cluster binding site YPO0531 IPR004430 3-isopropylmalate dehydratase, large subunit YPO0531 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain YPO0531 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 YPO0531 IPR033941 3-Isopropylmalate dehydratase, catalytic domain YPO0532 IPR024084 Isopropylmalate dehydrogenase-like domain YPO0532 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site YPO0532 IPR004429 Isopropylmalate dehydrogenase YPO0533 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site YPO0533 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain YPO0533 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily YPO0533 IPR013785 Aldolase-type TIM barrel YPO0533 IPR000891 Pyruvate carboxyltransferase YPO0533 IPR005671 2-isopropylmalate synthase, bacterial-type YPO0534 IPR036515 Transposase IS200-like superfamily YPO0534 IPR002686 Transposase IS200-like YPO0535 IPR000847 Transcription regulator HTH, LysR YPO0535 IPR005119 LysR, substrate-binding YPO0535 IPR036388 Winged helix-like DNA-binding domain superfamily YPO0535 IPR036390 Winged helix DNA-binding domain superfamily YPO0537 IPR020845 AMP-binding, conserved site YPO0537 IPR000873 AMP-dependent synthetase/ligase YPO0537 IPR042099 AMP-dependent synthetase-like superfamily YPO0539 IPR029061 Thiamin diphosphate-binding fold YPO0539 IPR012846 Acetolactate synthase, large subunit, biosynthetic YPO0539 IPR029035 DHS-like NAD/FAD-binding domain superfamily YPO0539 IPR012000 Thiamine pyrophosphate enzyme, central domain YPO0539 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YPO0539 IPR039368 Acetolactate synthase large subunit, TPP binding domain YPO0539 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain YPO0539 IPR000399 TPP-binding enzyme, conserved site YPO0540 IPR019455 Acetolactate synthase, small subunit, C-terminal YPO0540 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal YPO0540 IPR004789 Acetolactate synthase, small subunit YPO0540 IPR039557 AHAS, ACT domain YPO0540 IPR002912 ACT domain YPO0541 IPR036515 Transposase IS200-like superfamily YPO0541 IPR002686 Transposase IS200-like YPO0543 IPR000843 LacI-type HTH domain YPO0543 IPR001761 Periplasmic binding protein/LacI sugar binding domain YPO0543 IPR028082 Periplasmic binding protein-like I YPO0543 IPR012781 D-fructose-responsive transcription factor YPO0543 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPO0544 IPR010574 L-alanine exporter AlaE YPO0546 IPR038619 MraZ superfamily YPO0546 IPR037914 SpoVT-AbrB domain superfamily YPO0546 IPR020603 MraZ domain YPO0546 IPR035644 MraZ, C-terminal YPO0546 IPR003444 Transcriptional regulator MraZ YPO0546 IPR007159 SpoVT-AbrB domain YPO0546 IPR035642 MraZ, N-terminal YPO0547 IPR002903 Ribosomal RNA small subunit methyltransferase H YPO0547 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO0547 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily YPO0548 IPR011922 Cell division protein FtsL YPO0549 IPR012338 Beta-lactamase/transpeptidase-like YPO0549 IPR001460 Penicillin-binding protein, transpeptidase YPO0549 IPR036138 Penicillin-binding protein, dimerisation domain superfamily YPO0549 IPR005311 Penicillin-binding protein, dimerisation domain YPO0549 IPR037532 Peptidoglycan D,D-transpeptidase FtsI YPO0550 IPR004101 Mur ligase, C-terminal YPO0550 IPR036615 Mur ligase, C-terminal domain superfamily YPO0550 IPR013221 Mur ligase, central YPO0550 IPR000713 Mur ligase, N-terminal catalytic domain YPO0550 IPR035911 MurE/MurF, N-terminal YPO0550 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase YPO0550 IPR036565 Mur-like, catalytic domain superfamily YPO0551 IPR004101 Mur ligase, C-terminal YPO0551 IPR036565 Mur-like, catalytic domain superfamily YPO0551 IPR036615 Mur ligase, C-terminal domain superfamily YPO0551 IPR013221 Mur ligase, central YPO0551 IPR000713 Mur ligase, N-terminal catalytic domain YPO0551 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase YPO0551 IPR035911 MurE/MurF, N-terminal YPO0552 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site YPO0552 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase YPO0552 IPR000715 Glycosyl transferase, family 4 YPO0553 IPR004101 Mur ligase, C-terminal YPO0553 IPR036615 Mur ligase, C-terminal domain superfamily YPO0553 IPR013221 Mur ligase, central YPO0553 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase YPO0553 IPR036565 Mur-like, catalytic domain superfamily YPO0554 IPR013437 Probable peptidoglycan glycosyltransferase FtsW YPO0554 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site YPO0554 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA YPO0555 IPR004276 Glycosyltransferase family 28, N-terminal domain YPO0555 IPR007235 Glycosyl transferase, family 28, C-terminal YPO0555 IPR006009 N-acetylglucosaminyltransferase, MurG YPO0556 IPR000713 Mur ligase, N-terminal catalytic domain YPO0556 IPR005758 UDP-N-acetylmuramate--L-alanine ligase YPO0556 IPR036615 Mur ligase, C-terminal domain superfamily YPO0556 IPR013221 Mur ligase, central YPO0556 IPR036565 Mur-like, catalytic domain superfamily YPO0556 IPR004101 Mur ligase, C-terminal YPO0557 IPR011761 ATP-grasp fold YPO0557 IPR011127 D-alanine--D-alanine ligase, N-terminal domain YPO0557 IPR013815 ATP-grasp fold, subdomain 1 YPO0557 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site YPO0557 IPR005905 D-alanine--D-alanine ligase YPO0557 IPR011095 D-alanine--D-alanine ligase, C-terminal YPO0557 IPR016185 Pre-ATP-grasp domain superfamily YPO0558 IPR034746 POTRA domain YPO0558 IPR013685 POTRA domain, FtsQ-type YPO0558 IPR005548 Cell division protein FtsQ/DivIB YPO0558 IPR026579 Cell division protein FtsQ YPO0559 IPR003494 SHS2 domain inserted in FtsA YPO0559 IPR020823 Cell division protein FtsA YPO0560 IPR003008 Tubulin/FtsZ, GTPase domain YPO0560 IPR000158 Cell division protein FtsZ YPO0560 IPR020805 Cell division protein FtsZ, conserved site YPO0560 IPR024757 Cell division protein FtsZ, C-terminal YPO0560 IPR008280 Tubulin/FtsZ, C-terminal YPO0560 IPR036525 Tubulin/FtsZ, GTPase domain superfamily YPO0560 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain YPO0561 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase YPO0561 IPR020568 Ribosomal protein S5 domain 2-type fold YPO0561 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal YPO0561 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal YPO0563 IPR009502 Secretion monitor YPO0564 IPR004027 SEC-C motif YPO0564 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0564 IPR036266 SecA, Wing/Scaffold superfamily YPO0564 IPR011116 SecA Wing/Scaffold YPO0564 IPR011130 SecA, preprotein cross-linking domain YPO0564 IPR014018 SecA motor DEAD YPO0564 IPR011115 SecA DEAD-like, N-terminal YPO0564 IPR020937 SecA conserved site YPO0564 IPR000185 Protein translocase subunit SecA YPO0564 IPR036670 SecA, preprotein cross-linking domain superfamily YPO0565 IPR020084 NUDIX hydrolase, conserved site YPO0565 IPR020476 NUDIX hydrolase YPO0565 IPR003561 Mutator MutT YPO0565 IPR000086 NUDIX hydrolase domain YPO0565 IPR015797 NUDIX hydrolase-like domain superfamily YPO0566 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO0566 IPR001270 ClpA/B family YPO0566 IPR003593 AAA+ ATPase domain YPO0566 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0566 IPR002611 IstB-like ATP-binding protein YPO0567 IPR006120 Resolvase, HTH domain YPO0567 IPR036397 Ribonuclease H superfamily YPO0567 IPR012337 Ribonuclease H-like superfamily YPO0567 IPR001584 Integrase, catalytic core YPO0567 IPR017894 HTH domain, IS21 transposase-type YPO0568 IPR032808 DoxX family YPO0569a IPR009937 Putative Actinobacterial Holin-X, holin superfamily III YPO0570 IPR010279 Inner membrane protein YqjD/ElaB YPO0573 IPR027398 SecD export protein N-terminal TM domain YPO0573 IPR026574 Modulator protein MzrA YPO0574 IPR032816 SNARE associated Golgi protein YPO0574 IPR032818 DedA family YPO0576 IPR036390 Winged helix DNA-binding domain superfamily YPO0576 IPR036388 Winged helix-like DNA-binding domain superfamily YPO0576 IPR000524 Transcription regulator HTH, GntR YPO0576 IPR011711 GntR, C-terminal YPO0576 IPR008920 Transcription regulator FadR/GntR, C-terminal YPO0577 IPR011701 Major facilitator superfamily YPO0577 IPR020846 Major facilitator superfamily domain YPO0577 IPR036259 MFS transporter superfamily YPO0579 IPR032466 Metal-dependent hydrolase YPO0579 IPR003766 Uronate isomerase YPO0580 IPR036291 NAD(P)-binding domain superfamily YPO0580 IPR013131 Mannitol dehydrogenase, N-terminal YPO0580 IPR013118 Mannitol dehydrogenase, C-terminal YPO0580 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPO0580 IPR013328 6-phosphogluconate dehydrogenase, domain 2 YPO0580 IPR023668 Altronate oxidoreductase YPO0581 IPR013974 SAF domain YPO0581 IPR007392 D-galactarate/Altronate dehydratase, C-terminal YPO0582 IPR019629 Uncharacterised protein family HI1736/YgjV YPO0582 IPR026267 Inner membrane protein YgjV YPO0583 IPR002686 Transposase IS200-like YPO0583 IPR036515 Transposase IS200-like superfamily YPO0584 IPR036458 Sodium:dicarboxylate symporter superfamily YPO0584 IPR001991 Sodium:dicarboxylate symporter YPO0584 IPR023025 Serine/threonine transporter SstT YPO0585 IPR036291 NAD(P)-binding domain superfamily YPO0585 IPR000683 Oxidoreductase, N-terminal YPO0586 IPR002725 Protein of unknown function DUF45 YPO0587 IPR011050 Pectin lyase fold/virulence factor YPO0587 IPR036709 Autotransporter beta-domain superfamily YPO0587 IPR006315 Outer membrane autotransporter barrel YPO0587 IPR005546 Autotransporter beta-domain YPO0588 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPO0588 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD YPO0588 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO0588 IPR007848 Methyltransferase small domain YPO0589 IPR036188 FAD/NAD(P)-binding domain superfamily YPO0589 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal YPO0589 IPR023753 FAD/NAD(P)-binding domain YPO0589 IPR013785 Aldolase-type TIM barrel YPO0590 IPR005325 Protein of unknown function DUF308, membrane YPO0594 IPR011392 Tellurite resistance, TerY YPO0594 IPR002035 von Willebrand factor, type A YPO0594 IPR036465 von Willebrand factor A-like domain superfamily YPO0596 IPR003325 TerD domain YPO0597 IPR036465 von Willebrand factor A-like domain superfamily YPO0597 IPR002035 von Willebrand factor, type A YPO0597 IPR011392 Tellurite resistance, TerY YPO0598 IPR027282 Two partner secretion pathway transporter YPO0598 IPR005565 Haemolysin activator HlyB, C-terminal YPO0598 IPR035251 ShlB, POTRA domain YPO0598 IPR034746 POTRA domain YPO0598 IPR013686 Polypeptide-transport-associated, ShlB-type YPO0599 IPR012334 Pectin lyase fold YPO0599 IPR024973 ESPR domain YPO0599 IPR008638 Filamentous haemagglutinin, N-terminal YPO0599 IPR025157 Hemagglutinin repeat YPO0599 IPR011050 Pectin lyase fold/virulence factor YPO0599 IPR006914 VENN motif-containing domain YPO0599 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPO0601 IPR033799 CDI toxin, EC869-like YPO0601 IPR025157 Hemagglutinin repeat YPO0601 IPR006914 VENN motif-containing domain YPO0602a IPR011050 Pectin lyase fold/virulence factor YPO0602a IPR024973 ESPR domain YPO0602a IPR025157 Hemagglutinin repeat YPO0602a IPR012334 Pectin lyase fold YPO0602a IPR006914 VENN motif-containing domain YPO0602a IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPO0602a IPR008638 Filamentous haemagglutinin, N-terminal YPO0602b IPR025157 Hemagglutinin repeat YPO0602b IPR006914 VENN motif-containing domain YPO0602b IPR011050 Pectin lyase fold/virulence factor YPO0602b IPR024973 ESPR domain YPO0602b IPR008638 Filamentous haemagglutinin, N-terminal YPO0602b IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPO0602b IPR012334 Pectin lyase fold YPO0609 IPR003593 AAA+ ATPase domain YPO0609 IPR017871 ABC transporter, conserved site YPO0609 IPR008995 Molybdate/tungstate binding, C-terminal YPO0609 IPR005116 Transport-associated OB, type 1 YPO0609 IPR003439 ABC transporter-like YPO0609 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0609 IPR040582 MalK, OB fold domain YPO0610 IPR033432 Glycosyl hydrolase 36, catalytic domain YPO0610 IPR012341 Six-hairpin glycosidase-like superfamily YPO0610 IPR008928 Six-hairpin glycosidase superfamily YPO0611 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPO0611 IPR028082 Periplasmic binding protein-like I YPO0611 IPR000843 LacI-type HTH domain YPO0612 IPR006059 Bacterial extracellular solute-binding protein YPO0613 IPR035906 MetI-like superfamily YPO0613 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO0614 IPR035906 MetI-like superfamily YPO0614 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO0616 IPR013783 Immunoglobulin-like fold YPO0616 IPR026891 Fibronectin type III-like domain YPO0616 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily YPO0616 IPR001764 Glycoside hydrolase, family 3, N-terminal YPO0616 IPR019800 Glycoside hydrolase, family 3, active site YPO0616 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily YPO0616 IPR017853 Glycoside hydrolase superfamily YPO0616 IPR002772 Glycoside hydrolase family 3 C-terminal domain YPO0618 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein YPO0619 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPO0619 IPR005694 Efflux pump membrane protein YPO0619 IPR030196 Multidrug resistance protein MdtN YPO0623 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site YPO0623 IPR004839 Aminotransferase, class I/classII YPO0623 IPR015424 Pyridoxal phosphate-dependent transferase YPO0623 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPO0623 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPO0627 IPR035959 RutC-like superfamily YPO0627 IPR006175 YjgF/YER057c/UK114 family YPO0627 IPR019897 RidA, conserved site YPO0627 IPR006056 RidA family YPO0631 IPR036390 Winged helix DNA-binding domain superfamily YPO0631 IPR036388 Winged helix-like DNA-binding domain superfamily YPO0631 IPR000847 Transcription regulator HTH, LysR YPO0631 IPR005119 LysR, substrate-binding YPO0637 IPR017894 HTH domain, IS21 transposase-type YPO0637 IPR012337 Ribonuclease H-like superfamily YPO0637 IPR006120 Resolvase, HTH domain YPO0637 IPR001584 Integrase, catalytic core YPO0637 IPR036397 Ribonuclease H superfamily YPO0638 IPR003593 AAA+ ATPase domain YPO0638 IPR001270 ClpA/B family YPO0638 IPR002611 IstB-like ATP-binding protein YPO0638 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0638 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO0643 IPR007624 RNA polymerase sigma-70 region 3 YPO0643 IPR007127 RNA polymerase sigma factor 70, region 1.1 YPO0643 IPR014284 RNA polymerase sigma-70 like domain YPO0643 IPR000943 RNA polymerase sigma-70 YPO0643 IPR009042 RNA polymerase sigma-70 region 1.2 YPO0643 IPR007627 RNA polymerase sigma-70 region 2 YPO0643 IPR007630 RNA polymerase sigma-70 region 4 YPO0643 IPR007631 RNA polymerase sigma factor 70, non-essential domain YPO0643 IPR042189 Sigma-70 factor, region 1.1 superfamily YPO0643 IPR013325 RNA polymerase sigma factor, region 2 YPO0643 IPR013324 RNA polymerase sigma factor, region 3/4-like YPO0643 IPR036388 Winged helix-like DNA-binding domain superfamily YPO0643 IPR012760 RNA polymerase sigma factor RpoD, C-terminal YPO0643 IPR028630 RNA polymerase sigma factor RpoD YPO0644 IPR013173 DNA primase DnaG, DnaB-binding domain YPO0644 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal YPO0644 IPR006295 DNA primase, DnaG YPO0644 IPR019475 DNA primase, DnaB-helicase binding domain YPO0644 IPR013264 DNA primase, catalytic core, N-terminal YPO0644 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily YPO0644 IPR034151 Bacterial DnaG primase, TOPRIM domain YPO0644 IPR006171 TOPRIM domain YPO0644 IPR030846 DNA primase DnaG, bacteria YPO0644 IPR002694 Zinc finger, CHC2-type YPO0644 IPR036977 DNA Primase, CHC2-type zinc finger YPO0645 IPR018278 Ribosomal protein S21, conserved site YPO0645 IPR038380 Ribosomal protein S21 superfamily YPO0645 IPR001911 Ribosomal protein S21 YPO0646 IPR017861 Kae1/TsaD family YPO0646 IPR017860 Peptidase M22, conserved site YPO0646 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD YPO0646 IPR000905 Gcp-like domain YPO0647 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY YPO0648 IPR006157 Dihydroneopterin aldolase/epimerase domain YPO0648 IPR006156 Dihydroneopterin aldolase YPO0649 IPR003824 Undecaprenyl-diphosphatase UppP YPO0650 IPR006674 HD domain YPO0650 IPR003607 HD/PDEase domain YPO0650 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain YPO0650 IPR002646 Poly A polymerase, head domain YPO0650 IPR012006 tRNA nucleotidyltransferase, proteobacteria YPO0651 IPR016476 SH3 domain protein YPO0651 IPR003646 SH3-like domain, bacterial-type YPO0652 IPR023577 CYTH domain YPO0652 IPR007899 CHAD domain YPO0652 IPR033469 CYTH-like domain superfamily YPO0652 IPR039013 Inorganic triphosphatase YgiF YPO0653 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme YPO0653 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain YPO0653 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase YPO0654 IPR023030 Bifunctional protein HldE YPO0654 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YPO0654 IPR004821 Cytidyltransferase-like domain YPO0654 IPR011611 Carbohydrate kinase PfkB YPO0654 IPR011914 RfaE bifunctional protein, domain II YPO0654 IPR029056 Ribokinase-like YPO0654 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO0654 IPR011913 RfaE bifunctional protein, domain I YPO0655 IPR002293 Amino acid/polyamine transporter I YPO0656 IPR007475 Ubiquinone biosynthesis accessory factor UbiK YPO0658 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily YPO0658 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB YPO0659 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type YPO0659 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B YPO0660 IPR016185 Pre-ATP-grasp domain superfamily YPO0660 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain YPO0661 IPR009576 Biofilm formation YgiB YPO0663 IPR003423 Outer membrane efflux protein YPO0663 IPR010130 Type I secretion outer membrane protein, TolC YPO0664 IPR015797 NUDIX hydrolase-like domain superfamily YPO0664 IPR020084 NUDIX hydrolase, conserved site YPO0664 IPR000086 NUDIX hydrolase domain YPO0664 IPR004385 Nucleoside diphosphate pyrophosphatase YPO0665 IPR009659 Protein of unknown function DUF1249 YPO0666 IPR029052 Metallo-dependent phosphatase-like YPO0666 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA YPO0666 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type YPO0667 IPR029058 Alpha/Beta hydrolase fold YPO0667 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA YPO0668 IPR002288 DNA gyrase B subunit, C-terminal YPO0668 IPR020568 Ribosomal protein S5 domain 2-type fold YPO0668 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPO0668 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPO0668 IPR001241 DNA topoisomerase, type IIA YPO0668 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal YPO0668 IPR006171 TOPRIM domain YPO0668 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative YPO0668 IPR018522 DNA topoisomerase, type IIA, conserved site YPO0668 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 YPO0668 IPR013760 DNA topoisomerase, type IIA-like domain superfamily YPO0668 IPR003594 Histidine kinase/HSP90-like ATPase YPO0669 IPR036390 Winged helix DNA-binding domain superfamily YPO0669 IPR005119 LysR, substrate-binding YPO0669 IPR000847 Transcription regulator HTH, LysR YPO0669 IPR036388 Winged helix-like DNA-binding domain superfamily YPO0670 IPR003680 Flavodoxin-like fold YPO0670 IPR029039 Flavoprotein-like superfamily YPO0671 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal YPO0671 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative YPO0671 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily YPO0671 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta YPO0671 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat YPO0671 IPR013760 DNA topoisomerase, type IIA-like domain superfamily YPO0671 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal YPO0672 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase YPO0672 IPR002123 Phospholipid/glycerol acyltransferase YPO0673 IPR026589 Cell division protein FtsP YPO0673 IPR008972 Cupredoxin YPO0673 IPR011707 Multicopper oxidase, type 3 YPO0673 IPR011706 Multicopper oxidase, type 2 YPO0673 IPR006311 Twin-arginine translocation pathway, signal sequence YPO0676 IPR023210 NADP-dependent oxidoreductase domain YPO0676 IPR020471 Aldo/keto reductase YPO0676 IPR018170 Aldo/keto reductase, conserved site YPO0676 IPR036812 NADP-dependent oxidoreductase domain superfamily YPO0678 IPR018211 Alcohol dehydrogenase, iron-type, conserved site YPO0678 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA YPO0679 IPR009594 Transcription regulator HTH, AraC, N-terminal YPO0679 IPR018060 DNA binding HTH domain, AraC-type YPO0679 IPR009057 Homeobox-like domain superfamily YPO0680 IPR032818 DedA family YPO0680 IPR032816 SNARE associated Golgi protein YPO0681 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPO0681 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPO0681 IPR015424 Pyridoxal phosphate-dependent transferase YPO0681 IPR006233 Cystathionine beta-lyase, bacterial YPO0681 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme YPO0682 IPR014164 TonB-system energizer ExbB type-1 YPO0682 IPR002898 MotA/TolQ/ExbB proton channel YPO0683 IPR014170 TonB system transport protein ExbD type-1 YPO0683 IPR003400 Biopolymer transport protein ExbD/TolR YPO0690 IPR001482 Type II/IV secretion system protein YPO0690 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0690 IPR022399 Helicase/secretion neighbourhood ATPase YPO0696 IPR036515 Transposase IS200-like superfamily YPO0696 IPR002686 Transposase IS200-like YPO0697 IPR002686 Transposase IS200-like YPO0697 IPR036515 Transposase IS200-like superfamily YPO0698 IPR025885 PapC, N-terminal domain YPO0698 IPR018030 Fimbrial membrane usher, conserved site YPO0698 IPR037224 PapC, N-terminal domain superfamily YPO0698 IPR025949 PapC-like, C-terminal domain YPO0698 IPR042186 Outer membrane usher protein FimD, plug domain YPO0698 IPR000015 Outer membrane usher protein YPO0699 IPR001829 Pili assembly chaperone, bacterial YPO0699 IPR008962 PapD-like superfamily YPO0699 IPR016148 Pili assembly chaperone, C-terminal YPO0699 IPR016147 Pili assembly chaperone, N-terminal YPO0699 IPR018046 Pili assembly chaperone, conserved site YPO0699 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YPO0699 IPR013783 Immunoglobulin-like fold YPO0700 IPR036937 Fimbrial-type adhesion domain superfamily YPO0700 IPR000259 Fimbrial-type adhesion domain YPO0700 IPR015303 Fimbrial adhesin F17-AG, lectin domain YPO0700 IPR008966 Adhesion domain superfamily YPO0701 IPR002491 ABC transporter periplasmic binding domain YPO0706 IPR006135 Type III secretion system substrate exporter YPO0706 IPR006136 Flagellar biosynthetic protein FlhB YPO0706 IPR029025 Type III secretion system substrate exporter, C-terminal YPO0707 IPR002010 Type III secretion system inner membrane R protein YPO0707 IPR006303 Flagellar biosynthesis protein FliR YPO0708 IPR002191 Bacterial export protein family 3 YPO0708 IPR006305 Flagellar biosynthesis protein FliQ YPO0709 IPR005837 Flagellar transport protein FliP YPO0709 IPR005838 Type III secretion system inner membrane P protein YPO0710 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb YPO0710 IPR001543 Surface presentation of antigen (SpoA) YPO0710 IPR012826 Flagellar motor switch FliN YPO0710 IPR036429 SpoA-like superfamily YPO0712 IPR003593 AAA+ ATPase domain YPO0712 IPR011006 CheY-like superfamily YPO0712 IPR002197 DNA binding HTH domain, Fis-type YPO0712 IPR029995 Transcriptional activator SfnR/FlbD YPO0712 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0712 IPR002078 RNA polymerase sigma factor 54 interaction domain YPO0712 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YPO0712 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPO0712 IPR025944 Sigma-54 interaction domain, conserved site YPO0712 IPR009057 Homeobox-like domain superfamily YPO0712 IPR001789 Signal transduction response regulator, receiver domain YPO0713 IPR001624 Flagellar hook-basal body complex protein FliE YPO0714 IPR013556 Flagellar M-ring C-terminal YPO0714 IPR006182 Secretory protein YscJ/FliF YPO0714 IPR000067 Flagellar M-ring protein FliF YPO0717 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0717 IPR020005 Flagellar export ATPase FliI, clade 1 YPO0717 IPR005714 ATPase, type III secretion system, FliI/YscN YPO0717 IPR032463 ATPase, type III secretion system, FliI YPO0717 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain YPO0717 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site YPO0717 IPR003593 AAA+ ATPase domain YPO0717 IPR040627 T3SS EscN ATPase, C-terminal YPO0721 IPR013974 SAF domain YPO0721 IPR039246 Flagellar protein FlgA YPO0721 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal YPO0722 IPR001444 Flagellar basal body rod protein, N-terminal YPO0722 IPR006300 Flagellar basal-body rod protein FlgB YPO0722 IPR019776 Flagellar basal body rod protein, conserved site YPO0723 IPR001444 Flagellar basal body rod protein, N-terminal YPO0723 IPR019776 Flagellar basal body rod protein, conserved site YPO0723 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPO0723 IPR006299 Flagellar basal-body rod protein FlgC YPO0724 IPR025965 FlgD Ig-like domain YPO0724 IPR005648 Flagellar hook capping protein YPO0724 IPR025963 FlgD Tudor-like domain YPO0725 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like YPO0725 IPR037058 Flagellar hook protein FlgE superfamily YPO0725 IPR020013 Flagellar hook-basal body protein, FlgE/F/G YPO0725 IPR011491 Flagellar hook protein FlgE YPO0725 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPO0725 IPR019776 Flagellar basal body rod protein, conserved site YPO0725 IPR001444 Flagellar basal body rod protein, N-terminal YPO0726 IPR036515 Transposase IS200-like superfamily YPO0726 IPR002686 Transposase IS200-like YPO0728 IPR019776 Flagellar basal body rod protein, conserved site YPO0728 IPR020013 Flagellar hook-basal body protein, FlgE/F/G YPO0728 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPO0728 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like YPO0728 IPR001444 Flagellar basal body rod protein, N-terminal YPO0728 IPR012834 Flagellar basal-body rod FlgG YPO0729 IPR000527 Flagellar L-ring protein YPO0730 IPR001782 Flagellar P-ring protein YPO0732 IPR001444 Flagellar basal body rod protein, N-terminal YPO0732 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPO0732 IPR002371 Flagellar hook-associated protein 1 YPO0736 IPR016032 Signal transduction response regulator, C-terminal effector YPO0736 IPR040970 CadC C-terminal domain 1 YPO0736 IPR001867 OmpR/PhoB-type DNA-binding domain YPO0736 IPR036388 Winged helix-like DNA-binding domain superfamily YPO0736 IPR011990 Tetratricopeptide-like helical domain superfamily YPO0736 IPR039420 Transcriptional regulatory protein WalR-like YPO0737 IPR001029 Flagellin, D0/D1 domain YPO0737 IPR001492 Flagellin YPO0737 IPR042187 Flagellin, C-terminal domain, subdomain 2 YPO0738 IPR001029 Flagellin, D0/D1 domain YPO0738 IPR001492 Flagellin YPO0738 IPR042187 Flagellin, C-terminal domain, subdomain 2 YPO0739 IPR001492 Flagellin YPO0739 IPR042187 Flagellin, C-terminal domain, subdomain 2 YPO0739 IPR001029 Flagellin, D0/D1 domain YPO0740 IPR010810 Flagellin hook, IN motif YPO0740 IPR040026 Flagellar hook-associated protein 2 YPO0740 IPR010809 Flagellar hook-associated protein 2, C-terminal YPO0740 IPR003481 Flagellar hook-associated protein 2, N-terminal YPO0745 IPR013324 RNA polymerase sigma factor, region 3/4-like YPO0745 IPR000943 RNA polymerase sigma-70 YPO0745 IPR007627 RNA polymerase sigma-70 region 2 YPO0745 IPR012845 RNA polymerase sigma factor, FliA/WhiG YPO0745 IPR014284 RNA polymerase sigma-70 like domain YPO0745 IPR007630 RNA polymerase sigma-70 region 4 YPO0745 IPR013325 RNA polymerase sigma factor, region 2 YPO0746 IPR002898 MotA/TolQ/ExbB proton channel YPO0746 IPR022522 Flagellar motor stator, MotA YPO0746 IPR000540 Flagellar motor protein MotA, conserved site YPO0747 IPR036737 OmpA-like domain superfamily YPO0747 IPR025713 Motility protein B, N-terminal domain YPO0747 IPR006665 OmpA-like domain YPO0756 IPR036397 Ribonuclease H superfamily YPO0756 IPR012337 Ribonuclease H-like superfamily YPO0756 IPR001584 Integrase, catalytic core YPO0756 IPR025948 HTH-like domain YPO0756 IPR038965 Transposase InsF-like YPO0758 IPR000843 LacI-type HTH domain YPO0758 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPO0758 IPR028082 Periplasmic binding protein-like I YPO0759 IPR031312 Sodium/sulphate symporter, conserved site YPO0759 IPR001898 Solute carrier family 13 YPO0762 IPR001826 RHS protein YPO0762 IPR022385 Rhs repeat-associated core YPO0762 IPR031325 RHS repeat YPO0762 IPR006530 YD repeat YPO0764 IPR037026 Vgr protein, OB-fold domain superfamily YPO0764 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPO0764 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPO0764 IPR006531 Gp5 N-terminal YPO0767 IPR003474 Gluconate transporter YPO0770 IPR017871 ABC transporter, conserved site YPO0770 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0770 IPR003593 AAA+ ATPase domain YPO0770 IPR011917 ABC transporter, lipid A export, MsbA YPO0770 IPR011527 ABC transporter type 1, transmembrane domain YPO0770 IPR039421 Type I protein exporter YPO0770 IPR003439 ABC transporter-like YPO0770 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPO0771 IPR017938 Riboflavin synthase-like beta-barrel YPO0771 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0771 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YPO0771 IPR017927 FAD-binding domain, ferredoxin reductase-type YPO0771 IPR013113 FAD-binding 9, siderophore-interacting YPO0771 IPR017871 ABC transporter, conserved site YPO0771 IPR003439 ABC transporter-like YPO0771 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPO0771 IPR011527 ABC transporter type 1, transmembrane domain YPO0771 IPR003593 AAA+ ATPase domain YPO0771 IPR007037 Siderophore-interacting protein, C-terminal domain YPO0773 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPO0773 IPR001031 Thioesterase YPO0773 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS YPO0773 IPR020802 Polyketide synthase, thioesterase domain YPO0773 IPR029058 Alpha/Beta hydrolase fold YPO0776 IPR001242 Condensation domain YPO0776 IPR000873 AMP-dependent synthetase/ligase YPO0776 IPR042099 AMP-dependent synthetase-like superfamily YPO0776 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily YPO0776 IPR020845 AMP-binding, conserved site YPO0776 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO0776 IPR036736 ACP-like superfamily YPO0776 IPR010071 Amino acid adenylation domain YPO0776 IPR013217 Methyltransferase type 12 YPO0776 IPR006162 Phosphopantetheine attachment site YPO0776 IPR009081 Phosphopantetheine binding ACP domain YPO0776 IPR020806 Polyketide synthase, phosphopantetheine-binding domain YPO0777 IPR009081 Phosphopantetheine binding ACP domain YPO0777 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily YPO0777 IPR042099 AMP-dependent synthetase-like superfamily YPO0777 IPR000873 AMP-dependent synthetase/ligase YPO0777 IPR020845 AMP-binding, conserved site YPO0777 IPR025110 AMP-binding enzyme, C-terminal domain YPO0777 IPR036736 ACP-like superfamily YPO0777 IPR001242 Condensation domain YPO0777 IPR010071 Amino acid adenylation domain YPO0778 IPR010071 Amino acid adenylation domain YPO0778 IPR036736 ACP-like superfamily YPO0778 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily YPO0778 IPR042099 AMP-dependent synthetase-like superfamily YPO0778 IPR020845 AMP-binding, conserved site YPO0778 IPR000873 AMP-dependent synthetase/ligase YPO0778 IPR013217 Methyltransferase type 12 YPO0778 IPR020806 Polyketide synthase, phosphopantetheine-binding domain YPO0778 IPR009081 Phosphopantetheine binding ACP domain YPO0778 IPR001242 Condensation domain YPO0778 IPR006162 Phosphopantetheine attachment site YPO0778 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO0779 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO0779 IPR001270 ClpA/B family YPO0779 IPR003593 AAA+ ATPase domain YPO0779 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0779 IPR002611 IstB-like ATP-binding protein YPO0780 IPR017894 HTH domain, IS21 transposase-type YPO0780 IPR001584 Integrase, catalytic core YPO0780 IPR006120 Resolvase, HTH domain YPO0780 IPR012337 Ribonuclease H-like superfamily YPO0780 IPR036397 Ribonuclease H superfamily YPO0783 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily YPO0783 IPR020940 Thymidylate synthase, active site YPO0783 IPR000398 Thymidylate synthase YPO0783 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain YPO0784 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt YPO0785 IPR000121 PEP-utilising enzyme, C-terminal YPO0785 IPR006318 Phosphotransferase system, enzyme I-like YPO0785 IPR008731 Phosphotransferase system, enzyme I N-terminal YPO0785 IPR036618 PtsI, HPr-binding domain superfamily YPO0785 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily YPO0785 IPR040442 Pyruvate kinase-like domain superfamily YPO0785 IPR018274 PEP-utilising enzyme, active site YPO0785 IPR008279 PEP-utilising enzyme, mobile domain YPO0785 IPR029016 GAF-like domain superfamily YPO0785 IPR003018 GAF domain YPO0785 IPR023151 PEP-utilising enzyme, conserved site YPO0785 IPR036637 Phosphohistidine domain superfamily YPO0786 IPR015797 NUDIX hydrolase-like domain superfamily YPO0786 IPR020084 NUDIX hydrolase, conserved site YPO0786 IPR022927 RNA pyrophosphohydrolase RppH YPO0786 IPR000086 NUDIX hydrolase domain YPO0786 IPR020476 NUDIX hydrolase YPO0789 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II YPO0789 IPR004230 DNA mismatch repair protein MutH YPO0789 IPR011335 Restriction endonuclease type II-like YPO0789 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily YPO0790 IPR023210 NADP-dependent oxidoreductase domain YPO0790 IPR020471 Aldo/keto reductase YPO0790 IPR036812 NADP-dependent oxidoreductase domain superfamily YPO0792 IPR011701 Major facilitator superfamily YPO0792 IPR036259 MFS transporter superfamily YPO0792 IPR023727 Lysophospholipid transporter LplT YPO0793 IPR002123 Phospholipid/glycerol acyltransferase YPO0793 IPR023775 Bifunctional protein Aas YPO0793 IPR025110 AMP-binding enzyme, C-terminal domain YPO0793 IPR000873 AMP-dependent synthetase/ligase YPO0793 IPR020845 AMP-binding, conserved site YPO0793 IPR042099 AMP-dependent synthetase-like superfamily YPO0794 IPR006657 Molybdopterin dinucleotide-binding domain YPO0794 IPR006656 Molybdopterin oxidoreductase YPO0794 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site YPO0794 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase YPO0794 IPR009010 Aspartate decarboxylase-like domain superfamily YPO0795 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPO0795 IPR000843 LacI-type HTH domain YPO0795 IPR028082 Periplasmic binding protein-like I YPO0796 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal YPO0796 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site YPO0796 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal YPO0796 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site YPO0796 IPR000183 Ornithine/DAP/Arg decarboxylase YPO0796 IPR002986 Diaminopimelate decarboxylase, LysA YPO0796 IPR029066 PLP-binding barrel YPO0796 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal YPO0797 IPR036388 Winged helix-like DNA-binding domain superfamily YPO0797 IPR005119 LysR, substrate-binding YPO0797 IPR037414 Transcriptional activator protein LysR, PBP2 domain YPO0797 IPR036390 Winged helix DNA-binding domain superfamily YPO0797 IPR000847 Transcription regulator HTH, LysR YPO0798 IPR011701 Major facilitator superfamily YPO0798 IPR036259 MFS transporter superfamily YPO0798 IPR020846 Major facilitator superfamily domain YPO0799 IPR005119 LysR, substrate-binding YPO0799 IPR000847 Transcription regulator HTH, LysR YPO0799 IPR036388 Winged helix-like DNA-binding domain superfamily YPO0799 IPR036390 Winged helix DNA-binding domain superfamily YPO0802 IPR004090 Chemotaxis methyl-accepting receptor YPO0802 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding YPO0802 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YPO0802 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily YPO0802 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site YPO0802 IPR003660 HAMP domain YPO0806 IPR010627 Peptidase A24A, N-terminal YPO0806 IPR000045 Prepilin type IV endopeptidase, peptidase domain YPO0806 IPR014032 Peptidase A24A, prepilin type IV, bacterial YPO0810 IPR010055 Type II secretion system protein J YPO0810 IPR012902 Prokaryotic N-terminal methylation site YPO0811 IPR012902 Prokaryotic N-terminal methylation site YPO0811 IPR003413 Type II secretion system protein I domain YPO0811 IPR010052 Type II secretion system protein I YPO0813 IPR013545 Type II secretion system protein G YPO0813 IPR000983 Bacterial general secretion pathway protein G-type pilin YPO0813 IPR012902 Prokaryotic N-terminal methylation site YPO0813 IPR010054 General secretion pathway protein G YPO0814 IPR018076 Type II secretion system F domain YPO0814 IPR042094 Type II secretion system F domain superfamily YPO0814 IPR003004 GspF/PilC family YPO0814 IPR011850 General secretion pathway protein F YPO0814 IPR001992 Type II secretion system conserved site YPO0815 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0815 IPR013369 Type II secretion system GspE YPO0815 IPR003593 AAA+ ATPase domain YPO0815 IPR042181 Type II secretion system, protein E, N-terminal YPO0815 IPR037257 General secretory system II, protein E, N-terminal superfamily YPO0815 IPR001482 Type II/IV secretion system protein YPO0816 IPR038591 NolW-like superfamily YPO0816 IPR005644 NolW-like YPO0816 IPR001775 GspD/PilQ family YPO0816 IPR004846 Type II/III secretion system YPO0816 IPR004845 Type II secretion system GspD, conserved site YPO0816 IPR013356 Type II secretion system GspD YPO0819 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site YPO0819 IPR001765 Carbonic anhydrase YPO0819 IPR036874 Carbonic anhydrase superfamily YPO0824 IPR024200 Chondroitin sulfate ABC endolyase YPO0824 IPR008929 Chondroitin AC/alginate lyase YPO0824 IPR014718 Glycoside hydrolase-type carbohydrate-binding YPO0824 IPR011071 Polysaccharide lyase family 8-like, C-terminal YPO0824 IPR004103 Polysaccharide lyase family 8, C-terminal YPO0824 IPR008979 Galactose-binding-like domain superfamily YPO0824 IPR039174 Chondroitin sulfate ABC lyase YPO0824 IPR011013 Galactose mutarotase-like domain superfamily YPO0824 IPR015176 Lyase, N-terminal YPO0824 IPR015177 Lyase, catalytic YPO0824 IPR003159 Polysaccharide lyase family 8, central domain YPO0825 IPR003593 AAA+ ATPase domain YPO0825 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0825 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO0825 IPR001270 ClpA/B family YPO0825 IPR002611 IstB-like ATP-binding protein YPO0826 IPR012337 Ribonuclease H-like superfamily YPO0826 IPR036397 Ribonuclease H superfamily YPO0826 IPR001584 Integrase, catalytic core YPO0826 IPR017894 HTH domain, IS21 transposase-type YPO0826 IPR006120 Resolvase, HTH domain YPO0829 IPR000917 Sulfatase, N-terminal YPO0829 IPR017850 Alkaline-phosphatase-like, core domain superfamily YPO0831 IPR001034 DeoR-type HTH domain YPO0831 IPR037171 NagB/RpiA transferase-like YPO0831 IPR014036 DeoR C-terminal sensor domain YPO0831 IPR018356 Transcription regulator, HTH DeoR-type, conserved site YPO0831 IPR036390 Winged helix DNA-binding domain superfamily YPO0831 IPR036388 Winged helix-like DNA-binding domain superfamily YPO0832 IPR013785 Aldolase-type TIM barrel YPO0832 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ-like YPO0832 IPR023435 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit KbaZ YPO0833 IPR014180 Sugar isomerase, AgaS YPO0833 IPR035464 AgaS, SIS domain YPO0833 IPR035466 GlmS/AgaS, SIS domain 1 YPO0833 IPR001347 Sugar isomerase (SIS) YPO0834 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily YPO0834 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup YPO0834 IPR004720 Phosphotransferase system, sorbose subfamily IIB component YPO0835 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit YPO0836 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component YPO0837 IPR033887 PTS system mannose/sorbose specific IIA subunit YPO0837 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily YPO0837 IPR004701 Phosphotransferase system, mannose-type IIA component YPO0838 IPR011059 Metal-dependent hydrolase, composite domain superfamily YPO0838 IPR006680 Amidohydrolase-related YPO0838 IPR003764 N-acetylglucosamine-6-phosphate deacetylase YPO0838 IPR032466 Metal-dependent hydrolase YPO0839 IPR002347 Short-chain dehydrogenase/reductase SDR YPO0839 IPR036291 NAD(P)-binding domain superfamily YPO0839 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase YPO0839 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPO0840 IPR012341 Six-hairpin glycosidase-like superfamily YPO0840 IPR008928 Six-hairpin glycosidase superfamily YPO0840 IPR010905 Glycosyl hydrolase, family 88 YPO0841 IPR013785 Aldolase-type TIM barrel YPO0841 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme YPO0841 IPR023885 4Fe4S-binding SPASM domain YPO0841 IPR007197 Radical SAM YPO0842 IPR024607 Sulfatase, conserved site YPO0842 IPR017850 Alkaline-phosphatase-like, core domain superfamily YPO0842 IPR000917 Sulfatase, N-terminal YPO0844 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY YPO0844 IPR023955 D-tagatose-bisphosphate aldolase, class II, subunit GatY YPO0844 IPR000771 Fructose-bisphosphate aldolase, class-II YPO0844 IPR013785 Aldolase-type TIM barrel YPO0846 IPR000843 LacI-type HTH domain YPO0846 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPO0846 IPR028082 Periplasmic binding protein-like I YPO0846 IPR023588 Transcription regulator HTH, PurR YPO0847 IPR011701 Major facilitator superfamily YPO0847 IPR036259 MFS transporter superfamily YPO0847 IPR020846 Major facilitator superfamily domain YPO0848 IPR030459 Glycosyl hydrolases family 31, conserved site YPO0848 IPR032513 Alpha-glucosidase, domain of unknown function DUF4968 YPO0848 IPR025887 Glycoside hydrolase family 31, N-terminal domain YPO0848 IPR000322 Glycoside hydrolase family 31 YPO0848 IPR030458 Glycosyl hydrolases family 31, active site YPO0848 IPR011013 Galactose mutarotase-like domain superfamily YPO0848 IPR013780 Glycosyl hydrolase, all-beta YPO0848 IPR017853 Glycoside hydrolase superfamily YPO0848 IPR033403 Domain of unknown function DUF5110 YPO0849 IPR028082 Periplasmic binding protein-like I YPO0849 IPR000843 LacI-type HTH domain YPO0849 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPO0850 IPR003192 Porin, LamB-type YPO0850 IPR023738 Maltoporin YPO0850 IPR036998 Porin, LamB-type superfamily YPO0850a IPR013013 Phosphotransferase system, EIIC component, type 1 YPO0850a IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site YPO0850a IPR036878 Glucose permease domain IIB YPO0850a IPR001996 Phosphotransferase system, IIB component, type 1 YPO0850a IPR011299 PTS system glucose-specific IIBC component YPO0850a IPR003352 Phosphotransferase system, EIIC YPO0852 IPR013739 Beta-galactosidase C-terminal YPO0852 IPR013738 Beta-galactosidase trimerisation YPO0852 IPR017853 Glycoside hydrolase superfamily YPO0852 IPR013780 Glycosyl hydrolase, all-beta YPO0852 IPR013529 Glycoside hydrolase, family 42, N-terminal YPO0852 IPR003476 Glycoside hydrolase, family 42 YPO0852 IPR029062 Class I glutamine amidotransferase-like YPO0853 IPR017853 Glycoside hydrolase superfamily YPO0853 IPR011683 Glycosyl hydrolase family 53 YPO0854 IPR035906 MetI-like superfamily YPO0854 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO0855 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO0855 IPR035906 MetI-like superfamily YPO0856 IPR006059 Bacterial extracellular solute-binding protein YPO0856 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein YPO0857 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0857 IPR008995 Molybdate/tungstate binding, C-terminal YPO0857 IPR017871 ABC transporter, conserved site YPO0857 IPR040582 MalK, OB fold domain YPO0857 IPR003439 ABC transporter-like YPO0857 IPR003593 AAA+ ATPase domain YPO0858 IPR003593 AAA+ ATPase domain YPO0858 IPR003439 ABC transporter-like YPO0858 IPR017871 ABC transporter, conserved site YPO0858 IPR015861 ABC transporter, ribose import, RbsA YPO0858 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0859 IPR001851 ABC transporter, permease YPO0860 IPR025997 Periplasmic binding protein YPO0860 IPR028082 Periplasmic binding protein-like I YPO0863 IPR038765 Papain-like cysteine peptidase superfamily YPO0863 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family YPO0864 IPR036390 Winged helix DNA-binding domain superfamily YPO0864 IPR005149 Transcription regulator PadR, N-terminal YPO0864 IPR036388 Winged helix-like DNA-binding domain superfamily YPO0881 IPR001387 Cro/C1-type helix-turn-helix domain YPO0881 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPO0881 IPR022453 Zinc finger, MqsA-type YPO0881 IPR032758 Antitoxin MqsA/HigA-2 YPO0881 IPR022452 Antitoxin MqsA YPO0882 IPR031451 mRNA interferase toxin MqsR YPO0882 IPR038493 Toxin MqsR superfamily YPO0887 IPR002104 Integrase, catalytic domain YPO0887 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPO0887 IPR038488 Integrase, DNA-binding domain superfamily YPO0887 IPR004107 Integrase, SAM-like, N-terminal YPO0887 IPR013762 Integrase-like, catalytic domain superfamily YPO0887 IPR025166 Integrase, DNA-binding domain YPO0887 IPR010998 Integrase/recombinase, N-terminal YPO0888 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) YPO0888 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type YPO0888 IPR012340 Nucleic acid-binding, OB-fold YPO0888 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal YPO0888 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II YPO0888 IPR002313 Lysine-tRNA ligase, class II YPO0888 IPR006195 Aminoacyl-tRNA synthetase, class II YPO0890 IPR041122 RecJ, OB domain YPO0890 IPR004610 Bacterial RecJ exonuclease YPO0890 IPR001667 DDH domain YPO0890 IPR038763 DHH phosphoesterase superfamily YPO0890 IPR003156 DHHA1 domain YPO0891 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily YPO0891 IPR013766 Thioredoxin domain YPO0891 IPR017937 Thioredoxin, conserved site YPO0891 IPR012336 Thioredoxin-like fold YPO0891 IPR036249 Thioredoxin-like superfamily YPO0891 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal YPO0891 IPR033954 Disulphide bond isomerase, DsbC/G YPO0892 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPO0892 IPR013762 Integrase-like, catalytic domain superfamily YPO0892 IPR002104 Integrase, catalytic domain YPO0892 IPR010998 Integrase/recombinase, N-terminal YPO0892 IPR004107 Integrase, SAM-like, N-terminal YPO0892 IPR011932 Tyrosine recombinase XerD YPO0892 IPR023009 Tyrosine recombinase XerC/XerD YPO0893 IPR001226 Flavodoxin, conserved site YPO0893 IPR029039 Flavoprotein-like superfamily YPO0893 IPR010086 Flavodoxin, long chain YPO0893 IPR008254 Flavodoxin/nitric oxide synthase YPO0894 IPR010364 Uncharacterised protein family, inner membrane CreD YPO0895 IPR003660 HAMP domain YPO0895 IPR005467 Histidine kinase domain YPO0895 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPO0895 IPR029151 Periplasmic sensor-like domain superfamily YPO0895 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPO0895 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPO0895 IPR003594 Histidine kinase/HSP90-like ATPase YPO0895 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPO0896 IPR001867 OmpR/PhoB-type DNA-binding domain YPO0896 IPR016032 Signal transduction response regulator, C-terminal effector YPO0896 IPR001789 Signal transduction response regulator, receiver domain YPO0896 IPR039420 Transcriptional regulatory protein WalR-like YPO0896 IPR036388 Winged helix-like DNA-binding domain superfamily YPO0896 IPR011006 CheY-like superfamily YPO0896a IPR009883 Inner membrane protein YgfX YPO0897 IPR005631 Flavinator of succinate dehydrogenase YPO0897 IPR036714 Flavinator of succinate dehydrogenase superfamily YPO0898 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal YPO0898 IPR023758 tRNA-modifying protein YgfZ YPO0898 IPR017703 YgfZ/GcvT conserved site YPO0898 IPR006222 Aminomethyltransferase, folate-binding domain YPO0900 IPR004254 AdipoR/Haemolysin-III-related YPO0900 IPR005744 Hly-III YPO0905 IPR003437 Glycine dehydrogenase (decarboxylating) YPO0905 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPO0905 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPO0905 IPR015424 Pyridoxal phosphate-dependent transferase YPO0905 IPR020581 Glycine cleavage system P protein YPO0906 IPR000089 Biotin/lipoyl attachment YPO0906 IPR002930 Glycine cleavage system H-protein YPO0906 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site YPO0906 IPR017453 Glycine cleavage system H-protein, subgroup YPO0906 IPR033753 Glycine cleavage system H-protein/Simiate YPO0906 IPR011053 Single hybrid motif YPO0907 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 YPO0907 IPR006222 Aminomethyltransferase, folate-binding domain YPO0907 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain YPO0907 IPR028896 Aminomethyltransferase-like YPO0907 IPR022903 Glycine cleavage system T protein, bacteria YPO0907 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal YPO0907 IPR006223 Glycine cleavage system T protein YPO0908 IPR002938 FAD-binding domain YPO0908 IPR036188 FAD/NAD(P)-binding domain superfamily YPO0908 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site YPO0908 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 YPO0909 IPR036188 FAD/NAD(P)-binding domain superfamily YPO0909 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 YPO0909 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase YPO0909 IPR002938 FAD-binding domain YPO0909 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site YPO0910 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site YPO0910 IPR001714 Peptidase M24, methionine aminopeptidase YPO0910 IPR000994 Peptidase M24 YPO0910 IPR036005 Creatinase/aminopeptidase-like YPO0910 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal YPO0910 IPR007865 Aminopeptidase P, N-terminal YPO0911 IPR036255 YgfB-like superfamily YPO0911 IPR011978 Uncharacterised protein family UPF0149 YPO0912 IPR023771 Cell division protein ZapA, eubacteria YPO0912 IPR036192 Cell division protein ZapA-like superfamily YPO0912 IPR007838 Cell division protein ZapA-like YPO0913 IPR037171 NagB/RpiA transferase-like YPO0913 IPR002698 5-formyltetrahydrofolate cyclo-ligase YPO0913 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily YPO0914 IPR036291 NAD(P)-binding domain superfamily YPO0914 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain YPO0914 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YPO0914 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YPO0914 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPO0914 IPR002912 ACT domain YPO0915 IPR004788 Ribose 5-phosphate isomerase, type A YPO0915 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup YPO0915 IPR037171 NagB/RpiA transferase-like YPO0916 IPR000847 Transcription regulator HTH, LysR YPO0916 IPR036390 Winged helix DNA-binding domain superfamily YPO0916 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria YPO0916 IPR017685 HTH-type transcriptional regulator ArgP YPO0916 IPR005119 LysR, substrate-binding YPO0916 IPR036388 Winged helix-like DNA-binding domain superfamily YPO0917 IPR007497 Protein of unknown function DUF541 YPO0918 IPR023445 Arginine exporter protein ArgO, enterobacteria YPO0918 IPR004777 L-lysine exporter/arginine exporter YPO0918 IPR001123 Amino acid exporter protein, LeuE-type YPO0919 IPR023408 Mechanosensitive ion channel MscS domain superfamily YPO0919 IPR008910 Conserved TM helix YPO0919 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 YPO0919 IPR006686 Mechanosensitive ion channel MscS, conserved site YPO0919 IPR010920 LSM domain superfamily YPO0919 IPR006685 Mechanosensitive ion channel MscS YPO0919 IPR011066 Mechanosensitive ion channel MscS, C-terminal YPO0920 IPR013785 Aldolase-type TIM barrel YPO0920 IPR000771 Fructose-bisphosphate aldolase, class-II YPO0920 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype YPO0921 IPR036043 Phosphoglycerate kinase superfamily YPO0921 IPR015824 Phosphoglycerate kinase, N-terminal YPO0921 IPR015911 Phosphoglycerate kinase, conserved site YPO0921 IPR001576 Phosphoglycerate kinase YPO0922 IPR036291 NAD(P)-binding domain superfamily YPO0922 IPR006422 D-erythrose-4-phosphate dehydrogenase YPO0922 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family YPO0922 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site YPO0922 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain YPO0922 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain YPO0923 IPR002611 IstB-like ATP-binding protein YPO0923 IPR003593 AAA+ ATPase domain YPO0923 IPR001270 ClpA/B family YPO0923 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0923 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO0924 IPR001584 Integrase, catalytic core YPO0924 IPR017894 HTH domain, IS21 transposase-type YPO0924 IPR006120 Resolvase, HTH domain YPO0924 IPR012337 Ribonuclease H-like superfamily YPO0924 IPR036397 Ribonuclease H superfamily YPO0925 IPR002686 Transposase IS200-like YPO0925 IPR036515 Transposase IS200-like superfamily YPO0926 IPR005474 Transketolase, N-terminal YPO0926 IPR033247 Transketolase family YPO0926 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II YPO0926 IPR005475 Transketolase-like, pyrimidine-binding domain YPO0926 IPR029061 Thiamin diphosphate-binding fold YPO0926 IPR020826 Transketolase binding site YPO0926 IPR005478 Transketolase, bacterial-like YPO0926 IPR033248 Transketolase, C-terminal domain YPO0927 IPR001915 Peptidase M48 YPO0928 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily YPO0928 IPR017941 Rieske [2Fe-2S] iron-sulphur domain YPO0929 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal YPO0929 IPR040634 Arginine decarboxylase, helical bundle domain YPO0929 IPR041128 Arginine decarboxylase, C-terminal helical YPO0929 IPR002985 Arginine decarboxylase YPO0929 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site YPO0929 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal YPO0929 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site YPO0929 IPR000183 Ornithine/DAP/Arg decarboxylase YPO0929 IPR029066 PLP-binding barrel YPO0931 IPR002133 S-adenosylmethionine synthetase YPO0931 IPR022630 S-adenosylmethionine synthetase, C-terminal YPO0931 IPR022636 S-adenosylmethionine synthetase superfamily YPO0931 IPR022631 S-adenosylmethionine synthetase, conserved site YPO0931 IPR022628 S-adenosylmethionine synthetase, N-terminal YPO0931 IPR022629 S-adenosylmethionine synthetase, central domain YPO0932 IPR006640 SprT-like YPO0932 IPR023483 Uncharacterised protein family SprT YPO0932 IPR035240 SprT-like, zinc ribbon domain YPO0933 IPR007346 Endonuclease I YPO0934 IPR006700 Ribosomal RNA small subunit methyltransferase E YPO0934 IPR029028 Alpha/beta knot methyltransferases YPO0934 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPO0934 IPR015947 PUA-like superfamily YPO0935 IPR006284 Glutathione synthetase, prokaryotic YPO0935 IPR004218 Prokaryotic glutathione synthetase, ATP-binding YPO0935 IPR004215 Prokaryotic glutathione synthetase, N-terminal YPO0935 IPR011761 ATP-grasp fold YPO0935 IPR016185 Pre-ATP-grasp domain superfamily YPO0935 IPR013815 ATP-grasp fold, subdomain 1 YPO0936 IPR003774 Protein of unknown function UPF0301 YPO0937 IPR005227 Putative pre-16S rRNA nuclease YPO0937 IPR006641 YqgF/RNase H-like domain YPO0937 IPR037027 YqgF/RNase H-like domain superfamily YPO0937 IPR012337 Ribonuclease H-like superfamily YPO0938 IPR003010 Carbon-nitrogen hydrolase YPO0938 IPR036526 Carbon-nitrogen hydrolase superfamily YPO0938 IPR023719 Aliphatic amidase YPO0939 IPR017754 Agmatine deiminase YPO0939 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type YPO0940 IPR001482 Type II/IV secretion system protein YPO0940 IPR006321 Pilus retraction protein PilT YPO0940 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0940 IPR003593 AAA+ ATPase domain YPO0941 IPR011078 Pyridoxal phosphate homeostasis protein YPO0941 IPR029066 PLP-binding barrel YPO0941 IPR001608 Alanine racemase, N-terminal YPO0942 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPO0942 IPR036291 NAD(P)-binding domain superfamily YPO0942 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal YPO0942 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain YPO0942 IPR000304 Pyrroline-5-carboxylate reductase YPO0943 IPR003425 CCB3/YggT YPO0944 IPR036591 YggU-like superfamily YPO0944 IPR003746 Protein of unknown function DUF167 YPO0944 IPR005228 Conserved hypothetical protein CHP00251 YPO0945 IPR029001 Inosine triphosphate pyrophosphatase-like YPO0945 IPR002637 Ham1-like protein YPO0945 IPR020922 dITP/XTP pyrophosphatase YPO0946 IPR006638 Elp3/MiaB/NifB YPO0946 IPR010723 HemN, C-terminal YPO0946 IPR004559 Heme chaperone HemW-like YPO0946 IPR007197 Radical SAM YPO0946 IPR034505 Anaerobic coproporphyrinogen-III oxidase YPO0946 IPR023404 Radical SAM, alpha/beta horseshoe YPO0947 IPR020974 CGT/MARTX, cysteine protease (CPD) domain YPO0947 IPR038383 CGT/MARTX, cysteine protease (CPD) domain superfamily YPO0947 IPR020972 Dermonecrotic/RTX toxin, membrane localization domain YPO0947 IPR022742 Serine aminopeptidase, S33 YPO0947 IPR011509 RtxA toxin YPO0947 IPR011049 Serralysin-like metalloprotease, C-terminal YPO0947 IPR032074 Actin cross-linking domain YPO0947 IPR029058 Alpha/Beta hydrolase fold YPO0949 IPR012338 Beta-lactamase/transpeptidase-like YPO0949 IPR015868 Glutaminase YPO0950 IPR007416 Protein of unknown function DUF469 YPO0951 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type YPO0951 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO0952 IPR015797 NUDIX hydrolase-like domain superfamily YPO0952 IPR029119 MutY, C-terminal YPO0952 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal YPO0952 IPR000445 Helix-hairpin-helix motif YPO0952 IPR003265 HhH-GPD domain YPO0952 IPR004035 Endonuclease III, iron-sulphur binding site YPO0952 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif YPO0952 IPR004036 Endonuclease III-like, conserved site-2 YPO0952 IPR005760 A/G-specific adenine glycosylase MutY YPO0952 IPR011257 DNA glycosylase YPO0953 IPR007457 Fe(II) trafficking protein YggX YPO0953 IPR036766 Fe(II) trafficking protein YggX superfamily YPO0954 IPR008258 Transglycosylase SLT domain 1 YPO0954 IPR023664 Murein transglycosylase-C YPO0954 IPR024570 Murein transglycosylase-C, N-terminal YPO0954 IPR000189 Prokaryotic transglycosylase, active site YPO0954 IPR023346 Lysozyme-like domain superfamily YPO0956 IPR039423 TonB-dependent receptor-like YPO0956 IPR037066 TonB-dependent receptor, plug domain superfamily YPO0956 IPR012910 TonB-dependent receptor, plug domain YPO0957 IPR001851 ABC transporter, permease YPO0958 IPR017871 ABC transporter, conserved site YPO0958 IPR015861 ABC transporter, ribose import, RbsA YPO0958 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0958 IPR003439 ABC transporter-like YPO0958 IPR003593 AAA+ ATPase domain YPO0959 IPR025997 Periplasmic binding protein YPO0959 IPR028082 Periplasmic binding protein-like I YPO0960 IPR000310 Orn/Lys/Arg decarboxylase, major domain YPO0960 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPO0960 IPR015424 Pyridoxal phosphate-dependent transferase YPO0960 IPR027464 Ornithine decarboxylase, N-terminal YPO0960 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily YPO0960 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal YPO0960 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPO0960 IPR011193 Ornithine/lysine/arginine decarboxylase YPO0960 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal YPO0960 IPR011006 CheY-like superfamily YPO0963 IPR005063 Transposase, IS1 YPO0964 IPR003220 InsA N-terminal domain YPO0964 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain YPO0964 IPR009057 Homeobox-like domain superfamily YPO0968 IPR003220 InsA N-terminal domain YPO0968 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain YPO0968 IPR009057 Homeobox-like domain superfamily YPO0970 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPO0970 IPR006531 Gp5 N-terminal YPO0970 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal YPO0970 IPR037026 Vgr protein, OB-fold domain superfamily YPO0970 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPO0970 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain YPO0971 IPR041546 ClpA/ClpB, AAA lid domain YPO0971 IPR018368 ClpA/B, conserved site 1 YPO0971 IPR001270 ClpA/B family YPO0971 IPR004176 Clp, N-terminal YPO0971 IPR036628 Clp, N-terminal domain superfamily YPO0971 IPR019489 Clp ATPase, C-terminal YPO0971 IPR017729 Type VI secretion system, ATPase ClpV1 YPO0971 IPR003593 AAA+ ATPase domain YPO0971 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0971 IPR003959 ATPase, AAA-type, core YPO0974 IPR006690 Outer membrane protein, OmpA-like, conserved site YPO0974 IPR006665 OmpA-like domain YPO0974 IPR036737 OmpA-like domain superfamily YPO0974 IPR006664 Outer membrane protein, bacterial YPO0974 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YPO0974 IPR028974 TSP type-3 repeat YPO0974 IPR008722 Outer membrane porin F, N-terminal YPO0977 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath YPO0981 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain YPO0981 IPR003220 InsA N-terminal domain YPO0983 IPR003675 CAAX prenyl protease 2 YPO0984 IPR016181 Acyl-CoA N-acyltransferase YPO0984 IPR001690 Autoinducer synthase YPO0984 IPR018311 Autoinducer synthesis, conserved site YPO0985 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain YPO0985 IPR036388 Winged helix-like DNA-binding domain superfamily YPO0985 IPR000792 Transcription regulator LuxR, C-terminal YPO0985 IPR016032 Signal transduction response regulator, C-terminal effector YPO0985 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily YPO0991 IPR016181 Acyl-CoA N-acyltransferase YPO0991 IPR019432 Siderophore biosynthesis protein, conserved domain YPO0992 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal YPO0992 IPR022770 Ferric iron reductase FhuF domain YPO0992 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like YPO0993 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase YPO0993 IPR036188 FAD/NAD(P)-binding domain superfamily YPO0994 IPR000531 TonB-dependent receptor-like, beta-barrel YPO0994 IPR037066 TonB-dependent receptor, plug domain superfamily YPO0994 IPR010105 TonB-dependent siderophore receptor YPO0994 IPR010917 TonB-dependent receptor, conserved site YPO0994 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YPO0994 IPR010916 TonB box, conserved site YPO0994 IPR012910 TonB-dependent receptor, plug domain YPO0994 IPR039426 Vitamin B12 transporter BtuB-like YPO0995 IPR001927 Sodium:galactoside symporter YPO0995 IPR020846 Major facilitator superfamily domain YPO0995 IPR036259 MFS transporter superfamily YPO0995 IPR039672 Lactose permease-like YPO0995 IPR018043 Sodium:galactoside symporter, conserved site YPO0997 IPR001584 Integrase, catalytic core YPO0997 IPR012337 Ribonuclease H-like superfamily YPO0997 IPR036397 Ribonuclease H superfamily YPO0997 IPR038965 Transposase InsF-like YPO0997 IPR025948 HTH-like domain YPO0998 IPR035919 EAL domain superfamily YPO0998 IPR001633 EAL domain YPO0998 IPR000160 GGDEF domain YPO0998 IPR029787 Nucleotide cyclase YPO0998 IPR001610 PAC motif YPO0998 IPR000014 PAS domain YPO0998 IPR013656 PAS fold-4 YPO0998 IPR035965 PAS domain superfamily YPO0998 IPR013655 PAS fold-3 YPO0998 IPR000700 PAS-associated, C-terminal YPO1000 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPO1000 IPR006143 RND efflux pump, membrane fusion protein YPO1001 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPO1001 IPR001036 Acriflavin resistance protein YPO1001 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 YPO1002 IPR012927 ShET2 enterotoxin, N-terminal YPO1002 IPR036770 Ankyrin repeat-containing domain superfamily YPO1002 IPR002110 Ankyrin repeat YPO1004 IPR036709 Autotransporter beta-domain superfamily YPO1004 IPR006315 Outer membrane autotransporter barrel YPO1004 IPR011050 Pectin lyase fold/virulence factor YPO1004 IPR005546 Autotransporter beta-domain YPO1005 IPR032675 Leucine-rich repeat domain superfamily YPO1005 IPR032674 LRR-containing bacterial E3 ligase, N-terminal YPO1005 IPR029487 Novel E3 ligase domain YPO1006 IPR032675 Leucine-rich repeat domain superfamily YPO1006 IPR029487 Novel E3 ligase domain YPO1006 IPR032674 LRR-containing bacterial E3 ligase, N-terminal YPO1006 IPR032675 Leucine-rich repeat domain superfamily YPO1006 IPR029487 Novel E3 ligase domain YPO1006 IPR032674 LRR-containing bacterial E3 ligase, N-terminal YPO1007 IPR032674 LRR-containing bacterial E3 ligase, N-terminal YPO1007 IPR032675 Leucine-rich repeat domain superfamily YPO1007 IPR029487 Novel E3 ligase domain YPO1008 IPR011540 AbgT, Proteobacteria YPO1008 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT YPO1009 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site YPO1009 IPR010161 Peptidase M20B, tripeptide aminopeptidase YPO1009 IPR011650 Peptidase M20, dimerisation domain YPO1009 IPR036264 Bacterial exopeptidase dimerisation domain YPO1009 IPR002933 Peptidase M20 YPO1011 IPR010105 TonB-dependent siderophore receptor YPO1011 IPR012910 TonB-dependent receptor, plug domain YPO1011 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YPO1011 IPR000531 TonB-dependent receptor-like, beta-barrel YPO1011 IPR039426 Vitamin B12 transporter BtuB-like YPO1012 IPR015424 Pyridoxal phosphate-dependent transferase YPO1012 IPR006162 Phosphopantetheine attachment site YPO1012 IPR009081 Phosphopantetheine binding ACP domain YPO1012 IPR020806 Polyketide synthase, phosphopantetheine-binding domain YPO1012 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPO1012 IPR032821 Ketoacyl-synthetase, C-terminal extension YPO1012 IPR014030 Beta-ketoacyl synthase, N-terminal YPO1012 IPR014031 Beta-ketoacyl synthase, C-terminal YPO1012 IPR000873 AMP-dependent synthetase/ligase YPO1012 IPR016039 Thiolase-like YPO1012 IPR018201 Beta-ketoacyl synthase, active site YPO1012 IPR001242 Condensation domain YPO1012 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily YPO1012 IPR010071 Amino acid adenylation domain YPO1012 IPR036736 ACP-like superfamily YPO1012 IPR005814 Aminotransferase class-III YPO1012 IPR025110 AMP-binding enzyme, C-terminal domain YPO1012 IPR020845 AMP-binding, conserved site YPO1012 IPR042099 AMP-dependent synthetase-like superfamily YPO1012 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPO1012 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPO1013 IPR006120 Resolvase, HTH domain YPO1013 IPR036397 Ribonuclease H superfamily YPO1013 IPR012337 Ribonuclease H-like superfamily YPO1013 IPR001584 Integrase, catalytic core YPO1013 IPR017894 HTH domain, IS21 transposase-type YPO1014 IPR002611 IstB-like ATP-binding protein YPO1014 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1014 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO1014 IPR001270 ClpA/B family YPO1014 IPR003593 AAA+ ATPase domain YPO1018 IPR013986 DExx box DNA helicase domain superfamily YPO1018 IPR011335 Restriction endonuclease type II-like YPO1018 IPR041500 RecC, C-terminal YPO1018 IPR006697 RecBCD enzyme subunit RecC YPO1018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1019 IPR032632 Peptidase M16, middle/third domain YPO1019 IPR007863 Peptidase M16, C-terminal YPO1019 IPR001431 Peptidase M16, zinc-binding site YPO1019 IPR011765 Peptidase M16, N-terminal YPO1019 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like YPO1020 IPR014017 UvrD-like DNA helicase, C-terminal YPO1020 IPR034739 UvrD/AddA helicase, N-terminal YPO1020 IPR014016 UvrD-like helicase, ATP-binding domain YPO1020 IPR000212 DNA helicase, UvrD/REP type YPO1020 IPR011335 Restriction endonuclease type II-like YPO1020 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1020 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type YPO1020 IPR004586 RecBCD enzyme subunit RecB YPO1020 IPR011604 Exonuclease, phage-type/RecB, C-terminal YPO1021 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1021 IPR027785 UvrD-like helicase C-terminal domain YPO1021 IPR006344 RecBCD enzyme subunit RecD YPO1021 IPR041851 RecBCD enzyme subunit RecD, N-terminal domain YPO1021 IPR003593 AAA+ ATPase domain YPO1022 IPR000182 GNAT domain YPO1022 IPR033719 N-acetylglutamate synthase, kinase-like domain YPO1022 IPR010167 Amino-acid N-acetyltransferase YPO1022 IPR001048 Aspartate/glutamate/uridylate kinase YPO1022 IPR016181 Acyl-CoA N-acyltransferase YPO1022 IPR036393 Acetylglutamate kinase-like superfamily YPO1023 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain YPO1023 IPR021731 AMIN domain YPO1023 IPR006311 Twin-arginine translocation pathway, signal sequence YPO1025 IPR010611 3D domain YPO1025 IPR026044 Membrane-bound lytic murein transglycosylase A YPO1025 IPR034654 MltA, 3D domain YPO1025 IPR005300 Lytic transglycosylase MltA, domain B YPO1025 IPR036908 RlpA-like domain superfamily YPO1026 IPR035985 Ubiquitin-activating enzyme YPO1026 IPR000594 THIF-type NAD/FAD binding fold YPO1027 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE YPO1027 IPR003808 Fe-S metabolism associated domain, SufE-like YPO1028 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPO1028 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site YPO1028 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPO1028 IPR015424 Pyridoxal phosphate-dependent transferase YPO1028 IPR000192 Aminotransferase class V domain YPO1028 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA YPO1029 IPR005119 LysR, substrate-binding YPO1029 IPR000847 Transcription regulator HTH, LysR YPO1029 IPR036388 Winged helix-like DNA-binding domain superfamily YPO1029 IPR036390 Winged helix DNA-binding domain superfamily YPO1030 IPR006696 Protein of unknown function DUF423 YPO1031 IPR040739 RlmM ferredoxin-like domain YPO1031 IPR011224 Ribosomal RNA large subunit methyltransferase M YPO1031 IPR002877 Ribosomal RNA methyltransferase FtsJ domain YPO1031 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO1032 IPR038969 Flap endonuclease YPO1032 IPR008918 Helix-hairpin-helix motif, class 2 YPO1032 IPR002421 5'-3' exonuclease, N-terminal YPO1032 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal YPO1032 IPR036279 5'-3' exonuclease, C-terminal domain superfamily YPO1032 IPR022895 Flap endonuclease Xni YPO1032 IPR020045 DNA polymerase I-like, H3TH domain YPO1032 IPR029060 PIN-like domain superfamily YPO1033 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal YPO1033 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily YPO1033 IPR031100 LOG family YPO1033 IPR021826 Domain of unknown function DUF3412 YPO1034 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 YPO1034 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal YPO1034 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF YPO1035 IPR009948 Syd YPO1035 IPR038228 Syd superfamily YPO1036 IPR036515 Transposase IS200-like superfamily YPO1036 IPR002686 Transposase IS200-like YPO1037 IPR007384 Protein of unknown function UCP006257 YPO1037 IPR036814 YqcC-like superfamily YPO1037 IPR023376 YqcC-like domain YPO1038 IPR006145 Pseudouridine synthase, RsuA/RluA YPO1038 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site YPO1038 IPR020103 Pseudouridine synthase, catalytic domain superfamily YPO1039 IPR029039 Flavoprotein-like superfamily YPO1039 IPR001094 Flavodoxin-like YPO1039 IPR008254 Flavodoxin/nitric oxide synthase YPO1040 IPR020911 Uncharacterised protein family UPF0325 YPO1041 IPR001451 Hexapeptide repeat YPO1041 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family YPO1041 IPR018357 Hexapeptide transferase, conserved site YPO1041 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 YPO1041 IPR011004 Trimeric LpxA-like superfamily YPO1041 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily YPO1042 IPR002912 ACT domain YPO1042 IPR003607 HD/PDEase domain YPO1042 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme YPO1042 IPR002934 Polymerase, nucleotidyl transferase domain YPO1042 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase YPO1042 IPR006674 HD domain YPO1043 IPR036005 Creatinase/aminopeptidase-like YPO1043 IPR001714 Peptidase M24, methionine aminopeptidase YPO1043 IPR000994 Peptidase M24 YPO1043 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 YPO1044 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid YPO1044 IPR001865 Ribosomal protein S2 YPO1044 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily YPO1044 IPR018130 Ribosomal protein S2, conserved site YPO1045 IPR001816 Translation elongation factor EFTs/EF1B YPO1045 IPR009060 UBA-like superfamily YPO1045 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation YPO1045 IPR036402 Elongation factor Ts, dimerisation domain superfamily YPO1045 IPR018101 Translation elongation factor Ts, conserved site YPO1046 IPR011817 Uridylate kinase YPO1046 IPR036393 Acetylglutamate kinase-like superfamily YPO1046 IPR001048 Aspartate/glutamate/uridylate kinase YPO1046 IPR015963 Uridylate kinase, bacteria YPO1047 IPR002661 Ribosome recycling factor YPO1047 IPR036191 RRF superfamily YPO1047 IPR023584 Ribosome recycling factor domain YPO1048 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal YPO1048 IPR036169 DXP reductoisomerase, C-terminal domain superfamily YPO1048 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal YPO1048 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase YPO1048 IPR026877 DXP reductoisomerase C-terminal domain YPO1048 IPR036291 NAD(P)-binding domain superfamily YPO1049 IPR001441 Decaprenyl diphosphate synthase-like YPO1049 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site YPO1049 IPR036424 Decaprenyl diphosphate synthase-like superfamily YPO1050 IPR000374 Phosphatidate cytidylyltransferase YPO1051 IPR001478 PDZ domain YPO1051 IPR041489 PDZ domain 6 YPO1051 IPR036034 PDZ superfamily YPO1051 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase YPO1051 IPR008915 Peptidase M50 YPO1052 IPR023707 Outer membrane protein assembly factor BamA YPO1052 IPR000184 Bacterial surface antigen (D15) YPO1052 IPR039910 Surface antigen D15-like YPO1052 IPR034746 POTRA domain YPO1052 IPR010827 POTRA domain, BamA/TamA-like YPO1053 IPR024930 Skp domain superfamily YPO1053 IPR005632 Chaperone protein Skp YPO1054 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region YPO1054 IPR018357 Hexapeptide transferase, conserved site YPO1054 IPR011004 Trimeric LpxA-like superfamily YPO1054 IPR001451 Hexapeptide repeat YPO1054 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD YPO1055 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ YPO1055 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ YPO1055 IPR029069 HotDog domain superfamily YPO1056 IPR001451 Hexapeptide repeat YPO1056 IPR011004 Trimeric LpxA-like superfamily YPO1056 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase YPO1056 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal YPO1056 IPR018357 Hexapeptide transferase, conserved site YPO1056 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily YPO1057 IPR003835 Glycosyl transferase, family 19 YPO1058 IPR001352 Ribonuclease HII/HIII YPO1058 IPR012337 Ribonuclease H-like superfamily YPO1058 IPR022898 Ribonuclease HII YPO1058 IPR036397 Ribonuclease H superfamily YPO1058 IPR024567 Ribonuclease HII/HIII domain YPO1059 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type YPO1059 IPR016195 Polymerase/histidinol phosphatase-like YPO1059 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain YPO1059 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain YPO1059 IPR040982 DNA polymerase III alpha subunit finger domain YPO1059 IPR029460 DNA polymerase, helix-hairpin-helix motif YPO1059 IPR004013 PHP domain YPO1059 IPR003141 Polymerase/histidinol phosphatase, N-terminal YPO1059 IPR004805 DNA polymerase III, alpha subunit YPO1060 IPR029045 ClpP/crotonase-like domain superfamily YPO1060 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal YPO1060 IPR001095 Acetyl-CoA carboxylase, alpha subunit YPO1061 IPR037478 YwkD-like domain YPO1061 IPR037523 Vicinal oxygen chelate (VOC) domain YPO1061 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain YPO1061 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase YPO1062 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain YPO1062 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal YPO1062 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal YPO1062 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal YPO1062 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO1062 IPR012094 tRNA(Ile)-lysidine synthase YPO1063 IPR009056 Cytochrome c-like domain YPO1063 IPR008168 Cytochrome c, class IC YPO1063 IPR036909 Cytochrome c-like domain superfamily YPO1064 IPR038626 Rof-like superfamily YPO1064 IPR009778 Modulator of Rho-dependent transcription termination YPO1064 IPR023534 Rof/RNase P-like YPO1064a IPR009624 Uncharacterised protein family UPF0253 YPO1065 IPR011335 Restriction endonuclease type II-like YPO1065 IPR009822 YaeQ YPO1065 IPR038590 YaeQ superfamily YPO1066 IPR000352 Peptide chain release factor class I YPO1067 IPR038139 NlpE, C-terminal domain superfamily YPO1067 IPR033450 NlpE, C-terminal OB domain YPO1067 IPR007298 Copper resistance lipoprotein NlpE YPO1068 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 YPO1068 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type YPO1068 IPR002316 Proline-tRNA ligase, class IIa YPO1068 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain YPO1068 IPR036621 Anticodon-binding domain superfamily YPO1068 IPR004154 Anticodon-binding YPO1068 IPR033730 Prokaryote proline-tRNA ligase core domain YPO1068 IPR006195 Aminoacyl-tRNA synthetase, class II YPO1068 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily YPO1068 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) YPO1069 IPR036413 YaeB-like superfamily YPO1069 IPR023370 TrmO-like, N-terminal domain YPO1069 IPR036414 YaeB, N-terminal domain superfamily YPO1069 IPR041369 TrmO, C-terminal YPO1069 IPR023368 Uncharacterised protein family UPF0066, conserved site YPO1069 IPR040372 YaeB-like YPO1070 IPR030852 Outer membrane lipoprotein RcsF YPO1071 IPR004872 Lipoprotein NlpA family YPO1072 IPR035906 MetI-like superfamily YPO1072 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO1073 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain YPO1073 IPR003439 ABC transporter-like YPO1073 IPR017871 ABC transporter, conserved site YPO1073 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1073 IPR003593 AAA+ ATPase domain YPO1073 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria YPO1073 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal YPO1073 IPR026253 Methionine import ATP-binding protein MetN YPO1073 IPR018449 NIL domain YPO1074 IPR036412 HAD-like superfamily YPO1074 IPR006543 Histidinol-phosphate phosphatase YPO1074 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase YPO1074 IPR023214 HAD superfamily YPO1074 IPR006549 HAD-superfamily hydrolase,subfamily IIIA YPO1075 IPR020471 Aldo/keto reductase YPO1075 IPR018170 Aldo/keto reductase, conserved site YPO1075 IPR023210 NADP-dependent oxidoreductase domain YPO1075 IPR036812 NADP-dependent oxidoreductase domain superfamily YPO1077 IPR022958 Uncharacterised protein family UPF0294 YPO1077 IPR005135 Endonuclease/exonuclease/phosphatase YPO1077 IPR036691 Endonuclease/exonuclease/phosphatase superfamily YPO1078 IPR000189 Prokaryotic transglycosylase, active site YPO1078 IPR008258 Transglycosylase SLT domain 1 YPO1078 IPR018392 LysM domain YPO1078 IPR036779 LysM domain superfamily YPO1078 IPR023346 Lysozyme-like domain superfamily YPO1079 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain YPO1079 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain YPO1079 IPR017782 Hydroxyacylglutathione hydrolase YPO1079 IPR001279 Metallo-beta-lactamase YPO1079 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YPO1080 IPR013216 Methyltransferase type 11 YPO1080 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO1080 IPR026669 Arsenite methyltransferase-like YPO1081 IPR022892 Ribonuclease HI YPO1081 IPR012337 Ribonuclease H-like superfamily YPO1081 IPR002156 Ribonuclease H domain YPO1081 IPR036397 Ribonuclease H superfamily YPO1082 IPR013520 Exonuclease, RNase T/DNA polymerase III YPO1082 IPR012337 Ribonuclease H-like superfamily YPO1082 IPR036397 Ribonuclease H superfamily YPO1082 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain YPO1082 IPR006309 DNA polymerase 3, epsilon subunit YPO1083 IPR012681 Nucleobase cation symporter-1, NCS1 YPO1083 IPR038271 Purine-cytosine permease superfamily YPO1083 IPR001248 Purine-cytosine permease YPO1085 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1085 IPR001270 ClpA/B family YPO1085 IPR003593 AAA+ ATPase domain YPO1085 IPR002611 IstB-like ATP-binding protein YPO1085 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO1086 IPR017894 HTH domain, IS21 transposase-type YPO1086 IPR006120 Resolvase, HTH domain YPO1086 IPR012337 Ribonuclease H-like superfamily YPO1086 IPR001584 Integrase, catalytic core YPO1086 IPR036397 Ribonuclease H superfamily YPO1089 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1089 IPR038724 Regulatory protein RepA YPO1098 IPR025166 Integrase, DNA-binding domain YPO1098 IPR010998 Integrase/recombinase, N-terminal YPO1098 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPO1098 IPR038488 Integrase, DNA-binding domain superfamily YPO1098 IPR013762 Integrase-like, catalytic domain superfamily YPO1098 IPR002104 Integrase, catalytic domain YPO1099 IPR002686 Transposase IS200-like YPO1099 IPR036515 Transposase IS200-like superfamily YPO1101 IPR020081 SsrA-binding protein, conserved site YPO1101 IPR023620 Small protein B YPO1101 IPR000037 SsrA-binding protein YPO1102 IPR005031 Coenzyme Q-binding protein COQ10, START domain YPO1102 IPR023393 START-like domain superfamily YPO1103 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp YPO1103 IPR037021 RnfH superfamily YPO1103 IPR005346 RnfH protein YPO1104 IPR026592 Outer membrane protein assembly factor BamE YPO1104 IPR007450 Lipoprotein SmpA/OmlA YPO1104 IPR037873 BamE-like YPO1105 IPR003395 RecF/RecN/SMC, N-terminal YPO1105 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1105 IPR004604 DNA recombination/repair protein RecN YPO1106 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal YPO1106 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily YPO1106 IPR002504 NAD kinase YPO1106 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal YPO1107 IPR013805 GrpE nucleotide exchange factor, coiled-coil YPO1107 IPR000740 GrpE nucleotide exchange factor YPO1107 IPR009012 GrpE nucleotide exchange factor, head YPO1108 IPR002020 Citrate synthase YPO1108 IPR010953 Citrate synthase, type I YPO1108 IPR019810 Citrate synthase active site YPO1108 IPR036969 Citrate synthase superfamily YPO1108 IPR024176 Citrate synthase, bacterial-type YPO1108 IPR016142 Citrate synthase-like, large alpha subdomain YPO1108 IPR016143 Citrate synthase-like, small alpha subdomain YPO1109 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site YPO1109 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit YPO1109 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit YPO1109 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit YPO1110 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor YPO1110 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit YPO1110 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit YPO1111 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal YPO1111 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily YPO1111 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit YPO1111 IPR011281 Succinate dehydrogenase, flavoprotein subunit YPO1111 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain YPO1111 IPR036188 FAD/NAD(P)-binding domain superfamily YPO1111 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily YPO1111 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site YPO1112 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein YPO1112 IPR036010 2Fe-2S ferredoxin-like superfamily YPO1112 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal YPO1112 IPR009051 Alpha-helical ferredoxin YPO1112 IPR012675 Beta-grasp domain superfamily YPO1112 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO1112 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPO1112 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain YPO1113 IPR005475 Transketolase-like, pyrimidine-binding domain YPO1113 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain YPO1113 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily YPO1113 IPR029061 Thiamin diphosphate-binding fold YPO1113 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal YPO1113 IPR001017 Dehydrogenase, E1 component YPO1113 IPR011603 2-oxoglutarate dehydrogenase E1 component YPO1114 IPR036625 E3-binding domain superfamily YPO1114 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily YPO1114 IPR004167 Peripheral subunit-binding domain YPO1114 IPR011053 Single hybrid motif YPO1114 IPR006255 Dihydrolipoamide succinyltransferase YPO1114 IPR000089 Biotin/lipoyl attachment YPO1114 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain YPO1114 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site YPO1115 IPR005809 Succinate--CoA synthetase, beta subunit YPO1115 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site YPO1115 IPR005811 ATP-citrate lyase/succinyl-CoA ligase YPO1115 IPR013815 ATP-grasp fold, subdomain 1 YPO1115 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type YPO1115 IPR011761 ATP-grasp fold YPO1115 IPR016102 Succinyl-CoA synthetase-like YPO1116 IPR016102 Succinyl-CoA synthetase-like YPO1116 IPR036291 NAD(P)-binding domain superfamily YPO1116 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site YPO1116 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site YPO1116 IPR003781 CoA-binding YPO1116 IPR005810 Succinyl-CoA ligase, alpha subunit YPO1116 IPR005811 ATP-citrate lyase/succinyl-CoA ligase YPO1117 IPR002585 Cytochrome ubiquinol oxidase subunit 1 YPO1118 IPR003317 Cytochrome ubiquinol oxidase subunit 2 YPO1119 IPR011846 Cyd operon protein YbgE YPO1120 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family YPO1120 IPR029069 HotDog domain superfamily YPO1120 IPR006683 Thioesterase domain YPO1120 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site YPO1120 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase YPO1121 IPR002898 MotA/TolQ/ExbB proton channel YPO1121 IPR014163 Tol-Pal system, TolQ YPO1122 IPR003400 Biopolymer transport protein ExbD/TolR YPO1122 IPR014168 Tol-Pal system protein TolR YPO1123 IPR014161 Tol-Pal system, TolA YPO1123 IPR014161 Tol-Pal system, TolA YPO1124 IPR007195 TolB, N-terminal YPO1124 IPR036752 TolB, N-terminal domain superfamily YPO1124 IPR011659 WD40-like Beta Propeller YPO1124 IPR011042 Six-bladed beta-propeller, TolB-like YPO1124 IPR014167 Tol-Pal system protein TolB YPO1125 IPR006665 OmpA-like domain YPO1125 IPR036737 OmpA-like domain superfamily YPO1125 IPR006690 Outer membrane protein, OmpA-like, conserved site YPO1125 IPR006664 Outer membrane protein, bacterial YPO1125 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal YPO1125 IPR039001 Peptidoglycan-associated lipoprotein YPO1126 IPR034706 Cell division coordinator CpoB YPO1126 IPR013026 Tetratricopeptide repeat-containing domain YPO1126 IPR011990 Tetratricopeptide-like helical domain superfamily YPO1126 IPR032519 YbgF, trimerisation domain YPO1126 IPR014162 Cell division coordinator CpoB, C-terminal YPO1126 IPR019734 Tetratricopeptide repeat YPO1127 IPR023513 Quinolinate synthase A, type 1 YPO1127 IPR036094 Quinolinate synthetase A superfamily YPO1127 IPR003473 Quinolinate synthetase A YPO1128 IPR006419 Nicotinamide mononucleotide transporter PnuC YPO1129 IPR036837 Cation efflux protein, cytoplasmic domain superfamily YPO1129 IPR002524 Cation efflux protein YPO1129 IPR023500 Zinc transporter ZitB YPO1129 IPR027469 Cation efflux transmembrane domain superfamily YPO1129a IPR006219 DHAP synthase, class 1 YPO1129a IPR013785 Aldolase-type TIM barrel YPO1129a IPR006218 DAHP synthetase I/KDSA YPO1131 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO1131 IPR001270 ClpA/B family YPO1131 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1131 IPR002611 IstB-like ATP-binding protein YPO1131 IPR003593 AAA+ ATPase domain YPO1132 IPR001584 Integrase, catalytic core YPO1132 IPR017894 HTH domain, IS21 transposase-type YPO1132 IPR036397 Ribonuclease H superfamily YPO1132 IPR012337 Ribonuclease H-like superfamily YPO1132 IPR006120 Resolvase, HTH domain YPO1133 IPR013078 Histidine phosphatase superfamily, clade-1 YPO1133 IPR029033 Histidine phosphatase superfamily YPO1133 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site YPO1133 IPR005952 Phosphoglycerate mutase 1 YPO1137 IPR019741 Galactokinase, conserved site YPO1137 IPR000705 Galactokinase YPO1137 IPR022963 Galactokinase, bacterial YPO1137 IPR006206 Mevalonate/galactokinase YPO1137 IPR013750 GHMP kinase, C-terminal domain YPO1137 IPR036554 GHMP kinase, C-terminal domain superfamily YPO1137 IPR020568 Ribosomal protein S5 domain 2-type fold YPO1137 IPR006203 GHMP kinase, ATP-binding, conserved site YPO1137 IPR006204 GHMP kinase N-terminal domain YPO1137 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPO1137 IPR019539 Galactokinase galactose-binding domain YPO1138 IPR001937 Galactose-1-phosphate uridyl transferase, class I YPO1138 IPR036265 HIT-like superfamily YPO1138 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site YPO1138 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal YPO1138 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal YPO1139 IPR016040 NAD(P)-binding domain YPO1139 IPR036291 NAD(P)-binding domain superfamily YPO1139 IPR005886 UDP-glucose 4-epimerase YPO1142 IPR003439 ABC transporter-like YPO1142 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1142 IPR003593 AAA+ ATPase domain YPO1143 IPR008995 Molybdate/tungstate binding, C-terminal YPO1143 IPR036388 Winged helix-like DNA-binding domain superfamily YPO1143 IPR000847 Transcription regulator HTH, LysR YPO1143 IPR005116 Transport-associated OB, type 1 YPO1143 IPR004606 Molybdenum-pterin binding YPO1143 IPR036390 Winged helix DNA-binding domain superfamily YPO1143 IPR003725 Molybdenum-binding protein ModE, N-terminal YPO1143 IPR016462 Molybdate-dependent transcriptional regulator ModE YPO1144 IPR019702 Multidrug efflux pump accessory protein AcrZ YPO1145 IPR005950 Molybdate ABC transporter, substrate-binding protein YPO1146 IPR035906 MetI-like superfamily YPO1146 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO1146 IPR011867 Molybdate ABC transporter, permease protein YPO1147 IPR003439 ABC transporter-like YPO1147 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1147 IPR004606 Molybdenum-pterin binding YPO1147 IPR011868 Molybdate ABC transporter, ATP-binding protein YPO1147 IPR005116 Transport-associated OB, type 1 YPO1147 IPR008995 Molybdate/tungstate binding, C-terminal YPO1147 IPR017871 ABC transporter, conserved site YPO1147 IPR015852 ABC transporter, molybdenum import, ModC YPO1147 IPR003593 AAA+ ATPase domain YPO1148 IPR023214 HAD superfamily YPO1148 IPR006379 HAD-superfamily hydrolase, subfamily IIB YPO1148 IPR036412 HAD-like superfamily YPO1148 IPR000150 Cof family YPO1149 IPR011045 Nitrous oxide reductase, N-terminal YPO1149 IPR015943 WD40/YVTN repeat-like-containing domain superfamily YPO1149 IPR019405 Lactonase, 7-bladed beta propeller YPO1149 IPR022528 6-phosphogluconolactonase, YbhE-type YPO1150 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA YPO1150 IPR015424 Pyridoxal phosphate-dependent transferase YPO1150 IPR005814 Aminotransferase class-III YPO1150 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPO1150 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPO1151 IPR006638 Elp3/MiaB/NifB YPO1151 IPR013785 Aldolase-type TIM barrel YPO1151 IPR007197 Radical SAM YPO1151 IPR024177 Biotin synthase YPO1151 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB YPO1151 IPR010722 Biotin and thiamin synthesis-associated domain YPO1152 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site YPO1152 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPO1152 IPR004839 Aminotransferase, class I/classII YPO1152 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type YPO1152 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria YPO1152 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPO1152 IPR015424 Pyridoxal phosphate-dependent transferase YPO1153 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC YPO1153 IPR013216 Methyltransferase type 11 YPO1153 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO1154 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1154 IPR004472 Dethiobiotin synthase BioD YPO1155 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal YPO1155 IPR017871 ABC transporter, conserved site YPO1155 IPR003439 ABC transporter-like YPO1155 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain YPO1155 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1155 IPR026253 Methionine import ATP-binding protein MetN YPO1155 IPR018449 NIL domain YPO1155 IPR003593 AAA+ ATPase domain YPO1156 IPR041471 UvrB, interaction domain YPO1156 IPR004807 UvrABC system, subunit B YPO1156 IPR036876 UVR domain superfamily YPO1156 IPR001943 UVR domain YPO1156 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1156 IPR001650 Helicase, C-terminal YPO1156 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPO1156 IPR024759 UvrB, YAD/RRR-motif-containing domain YPO1156 IPR006935 Helicase/UvrB, N-terminal YPO1157 IPR018668 DNA-binding protein VF530-like YPO1157 IPR036361 SAP domain superfamily YPO1158 IPR038136 Gluconeogenesis factor superfamily YPO1158 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 YPO1158 IPR010119 Gluconeogenesis factor YPO1159 IPR007197 Radical SAM YPO1159 IPR010505 Molybdenum cofactor synthesis C-terminal YPO1159 IPR013785 Aldolase-type TIM barrel YPO1159 IPR006638 Elp3/MiaB/NifB YPO1159 IPR013483 Molybdenum cofactor biosynthesis protein A YPO1159 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site YPO1160 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain YPO1160 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily YPO1160 IPR023045 Molybdenum cofactor biosynthesis C YPO1161 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp YPO1161 IPR012675 Beta-grasp domain superfamily YPO1161 IPR003749 Sulfur carrier ThiS/MoaD-like YPO1162 IPR003448 Molybdopterin biosynthesis MoaE YPO1162 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily YPO1163 IPR006214 Bax inhibitor 1-related YPO1164 IPR002686 Transposase IS200-like YPO1164 IPR036515 Transposase IS200-like superfamily YPO1165 IPR036188 FAD/NAD(P)-binding domain superfamily YPO1165 IPR011533 Oxygen-dependent choline dehydrogenase YPO1165 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal YPO1165 IPR027424 Glucose Oxidase, domain 2 YPO1165 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal YPO1165 IPR012132 Glucose-methanol-choline oxidoreductase YPO1166 IPR016161 Aldehyde/histidinol dehydrogenase YPO1166 IPR011264 Betaine aldehyde dehydrogenase YPO1166 IPR016160 Aldehyde dehydrogenase, cysteine active site YPO1166 IPR029510 Aldehyde dehydrogenase, glutamic acid active site YPO1166 IPR016163 Aldehyde dehydrogenase, C-terminal YPO1166 IPR016162 Aldehyde dehydrogenase, N-terminal YPO1166 IPR015590 Aldehyde dehydrogenase domain YPO1167 IPR017757 Transcriptional repressor BetI YPO1167 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily YPO1167 IPR009057 Homeobox-like domain superfamily YPO1167 IPR001647 DNA-binding HTH domain, TetR-type YPO1167 IPR039538 BetI-type transcriptional repressor, C-terminal YPO1167 IPR023772 DNA-binding HTH domain, TetR-type, conserved site YPO1168 IPR000060 BCCT transporter family YPO1168 IPR018093 BCCT transporter, conserved site YPO1169 IPR005119 LysR, substrate-binding YPO1169 IPR000847 Transcription regulator HTH, LysR YPO1169 IPR036388 Winged helix-like DNA-binding domain superfamily YPO1169 IPR036390 Winged helix DNA-binding domain superfamily YPO1169 IPR037409 HTH-type transcriptional regulator XapR, PBP2 domain YPO1171 IPR035994 Nucleoside phosphorylase superfamily YPO1171 IPR010943 Xanthosine phosphorylase YPO1171 IPR011268 Purine nucleoside phosphorylase YPO1171 IPR018099 Purine phosphorylase, family 2, conserved site YPO1171 IPR000845 Nucleoside phosphorylase domain YPO1172 IPR036259 MFS transporter superfamily YPO1172 IPR004740 Nucleoside:H+ symporter YPO1172 IPR020846 Major facilitator superfamily domain YPO1173 IPR002686 Transposase IS200-like YPO1173 IPR036515 Transposase IS200-like superfamily YPO1175 IPR035587 DUS-like, FMN-binding domain YPO1175 IPR001269 tRNA-dihydrouridine synthase YPO1175 IPR032886 tRNA-dihydrouridine(16) synthase YPO1175 IPR018517 tRNA-dihydrouridine synthase, conserved site YPO1175 IPR042270 tRNA-dihydrouridine(16) synthase, C-terminal YPO1175 IPR013785 Aldolase-type TIM barrel YPO1176 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal YPO1176 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A YPO1176 IPR012338 Beta-lactamase/transpeptidase-like YPO1177 IPR006094 FAD linked oxidase, N-terminal YPO1177 IPR016169 FAD-binding, type PCMH, subdomain 2 YPO1177 IPR036318 FAD-binding, type PCMH-like superfamily YPO1177 IPR016166 FAD-binding domain, PCMH-type YPO1177 IPR012256 D-lactate dehydrogenase YPO1177 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 YPO1177 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal YPO1177 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 YPO1177 IPR016167 FAD-binding, type PCMH, subdomain 1 YPO1177 IPR016164 FAD-linked oxidase-like, C-terminal YPO1178 IPR008173 Adenylyl cyclase CyaB YPO1178 IPR023577 CYTH domain YPO1178 IPR033469 CYTH-like domain superfamily YPO1179 IPR002711 HNH endonuclease YPO1179 IPR003615 HNH nuclease YPO1181 IPR007341 Transglycosylase-associated protein YPO1182 IPR003593 AAA+ ATPase domain YPO1182 IPR003439 ABC transporter-like YPO1182 IPR017871 ABC transporter, conserved site YPO1182 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1182 IPR012693 ABC transporter, phosphonate import, PhnC YPO1183 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein YPO1184 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO1184 IPR035906 MetI-like superfamily YPO1184 IPR005769 ABC transporter, permease PhnE/PtxC YPO1185 IPR035906 MetI-like superfamily YPO1185 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO1185 IPR005769 ABC transporter, permease PhnE/PtxC YPO1186 IPR009921 Domain of unknown function DUF1456 YPO1187 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPO1187 IPR003593 AAA+ ATPase domain YPO1187 IPR009057 Homeobox-like domain superfamily YPO1187 IPR002197 DNA binding HTH domain, Fis-type YPO1187 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1187 IPR000014 PAS domain YPO1187 IPR028082 Periplasmic binding protein-like I YPO1187 IPR002078 RNA polymerase sigma factor 54 interaction domain YPO1187 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YPO1187 IPR025944 Sigma-54 interaction domain, conserved site YPO1188 IPR001851 ABC transporter, permease YPO1189 IPR001851 ABC transporter, permease YPO1190 IPR017871 ABC transporter, conserved site YPO1190 IPR005876 Cobalt transport protein ATP-binding subunit YPO1190 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1190 IPR003593 AAA+ ATPase domain YPO1190 IPR003439 ABC transporter-like YPO1191 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein YPO1191 IPR003593 AAA+ ATPase domain YPO1191 IPR017871 ABC transporter, conserved site YPO1191 IPR003439 ABC transporter-like YPO1191 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1194 IPR036873 Rhodanese-like domain superfamily YPO1194 IPR001763 Rhodanese-like domain YPO1194 IPR001307 Thiosulphate sulfurtransferase, conserved site YPO1197 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO1197 IPR035906 MetI-like superfamily YPO1198 IPR003439 ABC transporter-like YPO1198 IPR003593 AAA+ ATPase domain YPO1198 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1198 IPR017871 ABC transporter, conserved site YPO1199 IPR035906 MetI-like superfamily YPO1199 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO1200 IPR002293 Amino acid/polyamine transporter I YPO1201 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily YPO1201 IPR011193 Ornithine/lysine/arginine decarboxylase YPO1201 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal YPO1201 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal YPO1201 IPR015424 Pyridoxal phosphate-dependent transferase YPO1201 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPO1201 IPR000310 Orn/Lys/Arg decarboxylase, major domain YPO1201 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPO1203 IPR004779 Carboxylate/Amino Acid/Amine Transporter YPO1203 IPR000620 EamA domain YPO1205 IPR033900 Porin domain, Gram-negative type YPO1205 IPR001897 Porin, gammaproteobacterial YPO1205 IPR001702 Porin, Gram-negative type YPO1205 IPR013793 Porin, Gram-negative type, conserved site YPO1205 IPR023614 Porin domain superfamily YPO1206 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type YPO1206 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1206 IPR006555 ATP-dependent helicase, C-terminal YPO1206 IPR039000 ATP-dependent DNA helicase DinG YPO1206 IPR001650 Helicase, C-terminal YPO1206 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPO1206 IPR006554 Helicase-like, DEXD box c2 type YPO1206 IPR010614 DEAD2 YPO1207 IPR037060 Catalase core domain superfamily YPO1207 IPR002226 Catalase haem-binding site YPO1207 IPR010582 Catalase immune-responsive domain YPO1207 IPR020835 Catalase superfamily YPO1207 IPR011614 Catalase core domain YPO1207 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 YPO1207 IPR040333 Catalase, clade 3 YPO1207 IPR024708 Catalase active site YPO1207 IPR018028 Catalase, mono-functional, haem-containing YPO1208 IPR023614 Porin domain superfamily YPO1208 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YPO1208 IPR009998 YfaZ YPO1209 IPR013061 Tryptophan/tryrosine permease, conserved site YPO1209 IPR013059 Tryptophan/tyrosine transporter YPO1209 IPR018227 Amino acid/polyamine transporter 2 YPO1210 IPR036425 MoaB/Mog-like domain superfamily YPO1210 IPR001453 MoaB/Mog domain YPO1210 IPR036653 CinA-like, C-terminal YPO1210 IPR008135 Competence-induced protein CinA YPO1211 IPR005658 Proteinase inhibitor I11, ecotin YPO1211 IPR036198 Ecotin superfamily YPO1211 IPR023084 Proteinase inhibitor I11, ecotin, gammaproteobacteria YPO1212 IPR036010 2Fe-2S ferredoxin-like superfamily YPO1212 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site YPO1212 IPR012675 Beta-grasp domain superfamily YPO1212 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain YPO1213 IPR030475 Ribonucleotide reductase small subunit, acitve site YPO1213 IPR009078 Ferritin-like superfamily YPO1213 IPR000358 Ribonucleotide reductase small subunit family YPO1213 IPR012348 Ribonucleotide reductase-like YPO1213 IPR033909 Ribonucleotide reductase small subunit YPO1214 IPR000788 Ribonucleotide reductase large subunit, C-terminal YPO1214 IPR039718 Ribonucleoside-diphosphate reductase large subunit YPO1214 IPR013346 Ribonucleotide reductase, class I , alpha subunit YPO1214 IPR005144 ATP-cone domain YPO1214 IPR013509 Ribonucleotide reductase large subunit, N-terminal YPO1214 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal YPO1215 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO1215 IPR010233 Ubiquinone biosynthesis O-methyltransferase YPO1216 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal YPO1216 IPR005743 DNA gyrase, subunit A YPO1216 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat YPO1216 IPR013760 DNA topoisomerase, type IIA-like domain superfamily YPO1216 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal YPO1216 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta YPO1216 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily YPO1217 IPR038388 RcsC, C-terminal domain superfamily YPO1217 IPR030856 Sensor histidine kinase RcsC YPO1217 IPR005467 Histidine kinase domain YPO1217 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPO1217 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPO1217 IPR011006 CheY-like superfamily YPO1217 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPO1217 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal YPO1217 IPR003594 Histidine kinase/HSP90-like ATPase YPO1217 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPO1217 IPR001789 Signal transduction response regulator, receiver domain YPO1218 IPR036388 Winged helix-like DNA-binding domain superfamily YPO1218 IPR016032 Signal transduction response regulator, C-terminal effector YPO1218 IPR000792 Transcription regulator LuxR, C-terminal YPO1218 IPR030864 Transcriptional regulatory protein RcsB YPO1218 IPR011006 CheY-like superfamily YPO1218 IPR001789 Signal transduction response regulator, receiver domain YPO1221 IPR036259 MFS transporter superfamily YPO1221 IPR020846 Major facilitator superfamily domain YPO1221 IPR011701 Major facilitator superfamily YPO1223 IPR036515 Transposase IS200-like superfamily YPO1223 IPR002686 Transposase IS200-like YPO1224 IPR001466 Beta-lactamase-related YPO1224 IPR012338 Beta-lactamase/transpeptidase-like YPO1226 IPR036259 MFS transporter superfamily YPO1226 IPR039672 Lactose permease-like YPO1226 IPR018043 Sodium:galactoside symporter, conserved site YPO1226 IPR001927 Sodium:galactoside symporter YPO1228 IPR001279 Metallo-beta-lactamase YPO1228 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D YPO1228 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YPO1229 IPR029151 Periplasmic sensor-like domain superfamily YPO1229 IPR033479 Double Cache domain 1 YPO1229 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YPO1229 IPR000727 Target SNARE coiled-coil homology domain YPO1229 IPR004090 Chemotaxis methyl-accepting receptor YPO1229 IPR003660 HAMP domain YPO1231 IPR000036 Peptidase A26, omptin YPO1231 IPR020079 Peptidase A26, omptin, conserved site YPO1231 IPR020080 Outer membrane adhesin/peptidase omptin YPO1232 IPR010391 DNA damage-inducible protein DinI-like YPO1232 IPR036687 DinI-like superfamily YPO1233 IPR015927 Peptidase S24/S26A/S26B/S26C YPO1233 IPR001387 Cro/C1-type helix-turn-helix domain YPO1233 IPR036286 LexA/Signal peptidase-like superfamily YPO1233 IPR039418 LexA-like YPO1233 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPO1234 IPR010534 Bacteriophage 933W, GpQ YPO1235 IPR010737 Four-carbon acid sugar kinase, N-terminal domain YPO1235 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily YPO1235 IPR031475 Nucleotide-binding C-terminal domain YPO1235 IPR042213 Nucleotide-binding, C-terminal domain superfamily YPO1236 IPR036409 Class II aldolase/adducin N-terminal domain superfamily YPO1236 IPR001303 Class II aldolase/adducin N-terminal YPO1237 IPR014036 DeoR C-terminal sensor domain YPO1237 IPR001034 DeoR-type HTH domain YPO1237 IPR036388 Winged helix-like DNA-binding domain superfamily YPO1237 IPR036390 Winged helix DNA-binding domain superfamily YPO1237 IPR037171 NagB/RpiA transferase-like YPO1237 IPR018356 Transcription regulator, HTH DeoR-type, conserved site YPO1238 IPR036237 Xylose isomerase-like superfamily YPO1238 IPR013022 Xylose isomerase-like, TIM barrel domain YPO1238 IPR026040 Hydroxypyruvate isomerase-like YPO1242 IPR020287 Tail sheath protein, C-terminal domain YPO1242 IPR007067 Tail sheath protein YPO1242 IPR035089 Tail sheath protein, subtilisin-like domain YPO1250 IPR006949 Baseplate protein J-like YPO1252 IPR037053 Phage tail collar domain superfamily YPO1252 IPR011083 Phage tail collar domain YPO1253 IPR009057 Homeobox-like domain superfamily YPO1253 IPR036388 Winged helix-like DNA-binding domain superfamily YPO1253 IPR000281 Helix-turn-helix protein RpiR YPO1253 IPR001347 Sugar isomerase (SIS) YPO1253 IPR035472 RpiR-like, SIS domain YPO1254 IPR001360 Glycoside hydrolase family 1 YPO1254 IPR018120 Glycoside hydrolase family 1, active site YPO1254 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site YPO1254 IPR017853 Glycoside hydrolase superfamily YPO1258 IPR003615 HNH nuclease YPO1258 IPR008514 Type VI secretion system effector, Hcp YPO1258 IPR036624 Hcp1-like superfamily YPO1260 IPR024588 Inner membrane protein YejM, N-terminal YPO1260 IPR012159 Inner membrane protein YejM YPO1260 IPR017850 Alkaline-phosphatase-like, core domain superfamily YPO1260 IPR000917 Sulfatase, N-terminal YPO1261 IPR023202 YejL-like superfamily YPO1261 IPR009857 Uncharacterised protein family UPF0352 YPO1262 IPR007358 Nucleoid-associated protein NdpA YPO1263 IPR002686 Transposase IS200-like YPO1263 IPR036515 Transposase IS200-like superfamily YPO1264 IPR029751 Ribosomal protein L25 YPO1264 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal YPO1264 IPR020055 Ribosomal protein L25, short-form YPO1264 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily YPO1265 IPR011332 Zinc-binding ribosomal protein YPO1265 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1265 IPR001650 Helicase, C-terminal YPO1265 IPR006935 Helicase/UvrB, N-terminal YPO1265 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPO1266 IPR036986 RNA-binding S4 domain superfamily YPO1266 IPR002942 RNA-binding S4 domain YPO1266 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site YPO1266 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F YPO1266 IPR006145 Pseudouridine synthase, RsuA/RluA YPO1266 IPR020103 Pseudouridine synthase, catalytic domain superfamily YPO1266 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain YPO1267 IPR004734 Multidrug resistance protein YPO1267 IPR036259 MFS transporter superfamily YPO1267 IPR020846 Major facilitator superfamily domain YPO1267 IPR011701 Major facilitator superfamily YPO1267 IPR004812 Drug resistance transporter Bcr/CmlA subfamily YPO1269 IPR020489 Uncharacterised protein family YejG YPO1270 IPR003439 ABC transporter-like YPO1270 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YPO1270 IPR017871 ABC transporter, conserved site YPO1270 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1270 IPR003593 AAA+ ATPase domain YPO1271 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO1271 IPR035906 MetI-like superfamily YPO1271 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YPO1272 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO1272 IPR035906 MetI-like superfamily YPO1273 IPR000914 Solute-binding protein family 5 domain YPO1273 IPR039424 Solute-binding protein family 5 YPO1273 IPR030678 Peptide/nickel binding protein, MppA-type YPO1275 IPR038765 Papain-like cysteine peptidase superfamily YPO1275 IPR000064 Endopeptidase, NLPC/P60 domain YPO1276 IPR032908 Lipid A 1-diphosphate synthase YPO1276 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily YPO1276 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPO1277 IPR003495 CobW/HypB/UreG, nucleotide-binding domain YPO1277 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal YPO1277 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1279 IPR008920 Transcription regulator FadR/GntR, C-terminal YPO1279 IPR036390 Winged helix DNA-binding domain superfamily YPO1279 IPR036388 Winged helix-like DNA-binding domain superfamily YPO1279 IPR011711 GntR, C-terminal YPO1279 IPR000524 Transcription regulator HTH, GntR YPO1280 IPR023027 Mannitol dehydrogenase, conserved site YPO1280 IPR013131 Mannitol dehydrogenase, N-terminal YPO1280 IPR013118 Mannitol dehydrogenase, C-terminal YPO1280 IPR000669 Mannitol dehydrogenase YPO1280 IPR036291 NAD(P)-binding domain superfamily YPO1280 IPR013328 6-phosphogluconate dehydrogenase, domain 2 YPO1280 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPO1283 IPR004628 Mannonate dehydratase YPO1283 IPR036237 Xylose isomerase-like superfamily YPO1284 IPR012340 Nucleic acid-binding, OB-fold YPO1284 IPR014722 Ribosomal protein L2, domain 2 YPO1284 IPR011897 Translation elongation factor P-like, YeiP YPO1284 IPR015365 Elongation factor P, C-terminal YPO1284 IPR020599 Translation elongation factor P/YeiP YPO1284 IPR001059 Translation elongation factor P/YeiP, central YPO1284 IPR013852 Translation elongation factor P/YeiP, conserved site YPO1284 IPR008991 Translation protein SH3-like domain superfamily YPO1284 IPR013185 Translation elongation factor, KOW-like YPO1285 IPR013059 Tryptophan/tyrosine transporter YPO1285 IPR018227 Amino acid/polyamine transporter 2 YPO1286 IPR005358 Putative zinc- or iron-chelating domain containing protein YPO1287 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1287 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPO1287 IPR036291 NAD(P)-binding domain superfamily YPO1288 IPR036291 NAD(P)-binding domain superfamily YPO1288 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YPO1288 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain YPO1288 IPR029009 Allosteric substrate binding domain superfamily YPO1288 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPO1288 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YPO1288 IPR006236 D-3-phosphoglycerate dehydrogenase YPO1288 IPR002912 ACT domain YPO1290 IPR010102 Succinate semialdehyde dehydrogenase YPO1290 IPR029510 Aldehyde dehydrogenase, glutamic acid active site YPO1290 IPR015590 Aldehyde dehydrogenase domain YPO1290 IPR016163 Aldehyde dehydrogenase, C-terminal YPO1290 IPR016160 Aldehyde dehydrogenase, cysteine active site YPO1290 IPR016161 Aldehyde/histidinol dehydrogenase YPO1290 IPR016162 Aldehyde dehydrogenase, N-terminal YPO1291 IPR006000 Xylulokinase YPO1291 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPO1291 IPR000577 Carbohydrate kinase, FGGY YPO1291 IPR018483 Carbohydrate kinase, FGGY, conserved site YPO1291 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPO1292 IPR037171 NagB/RpiA transferase-like YPO1292 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup YPO1292 IPR004788 Ribose 5-phosphate isomerase, type A YPO1294 IPR003593 AAA+ ATPase domain YPO1294 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1294 IPR015861 ABC transporter, ribose import, RbsA YPO1294 IPR017871 ABC transporter, conserved site YPO1294 IPR003439 ABC transporter-like YPO1295 IPR001851 ABC transporter, permease YPO1296 IPR000086 NUDIX hydrolase domain YPO1296 IPR015797 NUDIX hydrolase-like domain superfamily YPO1296 IPR020476 NUDIX hydrolase YPO1296 IPR020084 NUDIX hydrolase, conserved site YPO1298 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site YPO1298 IPR002114 Phosphotransferase system, HPr serine phosphorylation site YPO1298 IPR002178 PTS EIIA type-2 domain YPO1298 IPR016152 Phosphotransferase/anion transporter YPO1298 IPR000032 Phosphocarrier protein HPr-like YPO1298 IPR035895 HPr-like superfamily YPO1299 IPR017583 Tagatose/fructose phosphokinase YPO1299 IPR022463 Fructose 1-phosphate kinase YPO1299 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YPO1299 IPR011611 Carbohydrate kinase PfkB YPO1299 IPR029056 Ribokinase-like YPO1300 IPR013014 Phosphotransferase system, EIIC component, type 2 YPO1300 IPR006327 Phosphotransferase system, fructose IIC component YPO1300 IPR003352 Phosphotransferase system, EIIC YPO1300 IPR013011 Phosphotransferase system, EIIB component, type 2 YPO1300 IPR036095 PTS system IIB component-like superfamily YPO1300 IPR003501 Phosphotransferase system, EIIB component, type 2/3 YPO1300 IPR003353 Phosphotransferase system, fructose-specific IIB subunit YPO1301 IPR016032 Signal transduction response regulator, C-terminal effector YPO1301 IPR001867 OmpR/PhoB-type DNA-binding domain YPO1301 IPR036388 Winged helix-like DNA-binding domain superfamily YPO1302 IPR035182 Protein of unknown function PsaF YPO1304 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YPO1304 IPR001829 Pili assembly chaperone, bacterial YPO1304 IPR018046 Pili assembly chaperone, conserved site YPO1304 IPR013783 Immunoglobulin-like fold YPO1304 IPR016148 Pili assembly chaperone, C-terminal YPO1304 IPR016147 Pili assembly chaperone, N-terminal YPO1304 IPR008962 PapD-like superfamily YPO1305 IPR037224 PapC, N-terminal domain superfamily YPO1305 IPR025885 PapC, N-terminal domain YPO1305 IPR025949 PapC-like, C-terminal domain YPO1305 IPR018030 Fimbrial membrane usher, conserved site YPO1305 IPR000015 Outer membrane usher protein YPO1305 IPR042186 Outer membrane usher protein FimD, plug domain YPO1306 IPR001719 AP endonuclease 2 YPO1306 IPR013022 Xylose isomerase-like, TIM barrel domain YPO1306 IPR036237 Xylose isomerase-like superfamily YPO1306 IPR018246 AP endonuclease 2, zinc binding site YPO1307 IPR018383 Uncharacterised protein family UPF0324, prokaryote YPO1307 IPR004630 Uncharacterised protein family UPF0324, bacteria YPO1308 IPR000847 Transcription regulator HTH, LysR YPO1308 IPR005119 LysR, substrate-binding YPO1308 IPR036388 Winged helix-like DNA-binding domain superfamily YPO1308 IPR036390 Winged helix DNA-binding domain superfamily YPO1309 IPR004840 Amino acid permease, conserved site YPO1309 IPR004841 Amino acid permease/ SLC12A domain YPO1311 IPR000522 ABC transporter, permease protein, BtuC-like YPO1311 IPR037294 ABC transporter, BtuC-like YPO1312 IPR003439 ABC transporter-like YPO1312 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1312 IPR003593 AAA+ ATPase domain YPO1312 IPR015863 ABC transporter, hemin import, HmuV YPO1313 IPR000531 TonB-dependent receptor-like, beta-barrel YPO1313 IPR010917 TonB-dependent receptor, conserved site YPO1313 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YPO1313 IPR010916 TonB box, conserved site YPO1313 IPR037066 TonB-dependent receptor, plug domain superfamily YPO1313 IPR012910 TonB-dependent receptor, plug domain YPO1313 IPR039426 Vitamin B12 transporter BtuB-like YPO1314 IPR010987 Glutathione S-transferase, C-terminal-like YPO1314 IPR004045 Glutathione S-transferase, N-terminal YPO1314 IPR004046 Glutathione S-transferase, C-terminal YPO1314 IPR036249 Thioredoxin-like superfamily YPO1314 IPR036282 Glutathione S-transferase, C-terminal domain superfamily YPO1315 IPR036412 HAD-like superfamily YPO1315 IPR023214 HAD superfamily YPO1315 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like YPO1317 IPR004872 Lipoprotein NlpA family YPO1318 IPR003593 AAA+ ATPase domain YPO1318 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal YPO1318 IPR026253 Methionine import ATP-binding protein MetN YPO1318 IPR003439 ABC transporter-like YPO1318 IPR017871 ABC transporter, conserved site YPO1318 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain YPO1318 IPR018449 NIL domain YPO1318 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1319 IPR035906 MetI-like superfamily YPO1319 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO1320 IPR015956 Penicillin-binding protein, C-terminal domain superfamily YPO1320 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A YPO1320 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal YPO1320 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily YPO1320 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal YPO1320 IPR012338 Beta-lactamase/transpeptidase-like YPO1321 IPR004694 Hydroxy amino acid transporter YPO1322 IPR014036 DeoR C-terminal sensor domain YPO1322 IPR001034 DeoR-type HTH domain YPO1322 IPR037171 NagB/RpiA transferase-like YPO1322 IPR018356 Transcription regulator, HTH DeoR-type, conserved site YPO1323 IPR028581 Deoxyribose-phosphate aldolase type I YPO1323 IPR013785 Aldolase-type TIM barrel YPO1323 IPR011343 Deoxyribose-phosphate aldolase YPO1323 IPR002915 DeoC/FbaB/ lacD aldolase YPO1324 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPO1324 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily YPO1324 IPR033879 Undecaprenyl-diphosphatase YPO1326 IPR023017 Transport protein YbjL, putative YPO1326 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily YPO1326 IPR006037 Regulator of K+ conductance, C-terminal YPO1326 IPR006512 YidE/YbjL duplication YPO1327 IPR002109 Glutaredoxin YPO1327 IPR014025 Glutaredoxin subgroup YPO1327 IPR036249 Thioredoxin-like superfamily YPO1327 IPR011767 Glutaredoxin active site YPO1327 IPR011902 Glutaredoxin, GrxA YPO1328 IPR010815 Protein of unknown function DUF1418 YPO1330 IPR019660 Putative sensory transduction regulator YbjN YPO1331 IPR006059 Bacterial extracellular solute-binding protein YPO1331 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein YPO1332 IPR003593 AAA+ ATPase domain YPO1332 IPR003439 ABC transporter-like YPO1332 IPR017871 ABC transporter, conserved site YPO1332 IPR008995 Molybdate/tungstate binding, C-terminal YPO1332 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1332 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit YPO1332 IPR013611 Transport-associated OB, type 2 YPO1333 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO1333 IPR035906 MetI-like superfamily YPO1334 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO1334 IPR035906 MetI-like superfamily YPO1335 IPR019703 Protein of unknown function DUF2593 YPO1336 IPR030390 RNA methyltransferase TrmA, active site YPO1336 IPR010280 (Uracil-5)-methyltransferase family YPO1336 IPR030391 RNA methyltransferase TrmA, conserved site YPO1336 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC YPO1336 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO1338 IPR001584 Integrase, catalytic core YPO1338 IPR006120 Resolvase, HTH domain YPO1338 IPR017894 HTH domain, IS21 transposase-type YPO1338 IPR012337 Ribonuclease H-like superfamily YPO1338 IPR036397 Ribonuclease H superfamily YPO1339 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO1339 IPR001270 ClpA/B family YPO1339 IPR003593 AAA+ ATPase domain YPO1339 IPR002611 IstB-like ATP-binding protein YPO1339 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1345 IPR003439 ABC transporter-like YPO1345 IPR003593 AAA+ ATPase domain YPO1345 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1345 IPR017871 ABC transporter, conserved site YPO1346 IPR036291 NAD(P)-binding domain superfamily YPO1346 IPR004298 Nicotianamine synthase YPO1347 IPR016935 Opine metallophore dehydrogenase YPO1347 IPR036291 NAD(P)-binding domain superfamily YPO1348 IPR000620 EamA domain YPO1349 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO1349 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain YPO1349 IPR035906 MetI-like superfamily YPO1350 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain YPO1350 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO1350 IPR035906 MetI-like superfamily YPO1351 IPR001320 Ionotropic glutamate receptor YPO1351 IPR018313 Solute-binding protein family 3, conserved site YPO1351 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPO1351 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter YPO1352 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1352 IPR003439 ABC transporter-like YPO1352 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type YPO1352 IPR003593 AAA+ ATPase domain YPO1352 IPR017871 ABC transporter, conserved site YPO1353 IPR036263 Chorismate mutase type II superfamily YPO1353 IPR002701 Chorismate mutase II, prokaryotic-type YPO1353 IPR008240 Chorismate mutase, periplasmic YPO1354 IPR024289 Domain of unknown function DUF3828 YPO1355 IPR001509 NAD-dependent epimerase/dehydratase YPO1355 IPR036291 NAD(P)-binding domain superfamily YPO1356 IPR021295 Protein of unknown function DUF2867 YPO1356 IPR016040 NAD(P)-binding domain YPO1356 IPR036291 NAD(P)-binding domain superfamily YPO1357 IPR023603 Threonine aldolase YPO1357 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPO1357 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPO1357 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase YPO1357 IPR015424 Pyridoxal phosphate-dependent transferase YPO1358 IPR029035 DHS-like NAD/FAD-binding domain superfamily YPO1358 IPR029061 Thiamin diphosphate-binding fold YPO1358 IPR012000 Thiamine pyrophosphate enzyme, central domain YPO1358 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain YPO1358 IPR000399 TPP-binding enzyme, conserved site YPO1358 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YPO1359 IPR036010 2Fe-2S ferredoxin-like superfamily YPO1359 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain YPO1359 IPR017938 Riboflavin synthase-like beta-barrel YPO1359 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain YPO1359 IPR000951 Phthalate dioxygenase reductase YPO1359 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPO1359 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YPO1359 IPR017927 FAD-binding domain, ferredoxin reductase-type YPO1359 IPR012675 Beta-grasp domain superfamily YPO1360 IPR016100 Prismane, alpha-bundle YPO1360 IPR011254 Prismane-like superfamily YPO1360 IPR010048 Hydroxylamine reductase YPO1360 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase YPO1360 IPR016099 Prismane-like, alpha/beta-sandwich YPO1361 IPR005642 Lysine exporter LysO YPO1362 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1362 IPR022602 Protein of unknown function DUF2813 YPO1362 IPR034139 OLD protein-like, TOPRIM domain YPO1362 IPR006171 TOPRIM domain YPO1363 IPR007488 Protein of unknown function DUF535 YPO1364 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPO1364 IPR030190 Macrolide export protein MacA YPO1364 IPR006143 RND efflux pump, membrane fusion protein YPO1365 IPR003439 ABC transporter-like YPO1365 IPR025857 MacB-like periplasmic core domain YPO1365 IPR017871 ABC transporter, conserved site YPO1365 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1365 IPR003593 AAA+ ATPase domain YPO1365 IPR003838 ABC transporter permease protein domain YPO1365 IPR017911 ABC transporter, macrolide export, ATP-binding domain YPO1366 IPR012751 CspD, cold shock YPO1366 IPR012340 Nucleic acid-binding, OB-fold YPO1366 IPR002059 Cold-shock protein, DNA-binding YPO1366 IPR019844 Cold-shock (CSD) domain YPO1366 IPR011129 Cold shock domain YPO1366 IPR012156 Cold shock, CspA YPO1367 IPR022935 ATP-dependent Clp protease adaptor protein ClpS YPO1367 IPR003769 Adaptor protein ClpS, core YPO1367 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like YPO1368 IPR041546 ClpA/ClpB, AAA lid domain YPO1368 IPR001270 ClpA/B family YPO1368 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA YPO1368 IPR004176 Clp, N-terminal YPO1368 IPR036628 Clp, N-terminal domain superfamily YPO1368 IPR019489 Clp ATPase, C-terminal YPO1368 IPR028299 ClpA/B, conserved site 2 YPO1368 IPR003593 AAA+ ATPase domain YPO1368 IPR003959 ATPase, AAA-type, core YPO1368 IPR018368 ClpA/B, conserved site 1 YPO1368 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1369 IPR002686 Transposase IS200-like YPO1369 IPR036515 Transposase IS200-like superfamily YPO1370 IPR012340 Nucleic acid-binding, OB-fold YPO1370 IPR004368 Translation initiation factor IF-1 YPO1370 IPR006196 RNA-binding domain, S1, IF1 type YPO1370 IPR022967 RNA-binding domain, S1 YPO1371 IPR016181 Acyl-CoA N-acyltransferase YPO1371 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal YPO1371 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase YPO1372 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPO1372 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC YPO1372 IPR003593 AAA+ ATPase domain YPO1372 IPR003439 ABC transporter-like YPO1372 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1372 IPR017871 ABC transporter, conserved site YPO1372 IPR011527 ABC transporter type 1, transmembrane domain YPO1373 IPR017871 ABC transporter, conserved site YPO1373 IPR011527 ABC transporter type 1, transmembrane domain YPO1373 IPR003593 AAA+ ATPase domain YPO1373 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD YPO1373 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1373 IPR003439 ABC transporter-like YPO1373 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPO1373 IPR039421 Type I protein exporter YPO1374 IPR005982 Thioredoxin reductase YPO1374 IPR023753 FAD/NAD(P)-binding domain YPO1374 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site YPO1374 IPR036188 FAD/NAD(P)-binding domain superfamily YPO1375 IPR036388 Winged helix-like DNA-binding domain superfamily YPO1375 IPR019885 Transcription regulator HTH, AsnC-type, conserved site YPO1375 IPR036390 Winged helix DNA-binding domain superfamily YPO1375 IPR019888 Transcription regulator AsnC-type YPO1375 IPR011008 Dimeric alpha-beta barrel YPO1375 IPR000485 AsnC-type HTH domain YPO1375 IPR011991 ArsR-like helix-turn-helix domain YPO1375 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain YPO1376 IPR002543 FtsK domain YPO1376 IPR041027 FtsK alpha domain YPO1376 IPR025199 DNA translocase FtsK, 4TM region YPO1376 IPR036388 Winged helix-like DNA-binding domain superfamily YPO1376 IPR018541 FtsK gamma domain YPO1376 IPR036390 Winged helix DNA-binding domain superfamily YPO1376 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1377 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria YPO1377 IPR004564 Outer membrane lipoprotein carrier protein LolA-like YPO1377 IPR029046 Lipoprotein localisation LolA/LolB/LppX YPO1378 IPR021886 MgsA AAA+ ATPase C-terminal YPO1378 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1378 IPR003959 ATPase, AAA-type, core YPO1378 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal YPO1378 IPR032423 AAA C-terminal domain YPO1378 IPR003593 AAA+ ATPase domain YPO1379 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm YPO1379 IPR015866 Serine-tRNA synthetase, type1, N-terminal YPO1379 IPR002317 Serine-tRNA ligase, type1 YPO1379 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) YPO1379 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily YPO1379 IPR033729 Serine-tRNA ligase catalytic core domain YPO1379 IPR006195 Aminoacyl-tRNA synthetase, class II YPO1380 IPR023745 MSF-type transporter, YcaD YPO1380 IPR036259 MFS transporter superfamily YPO1380 IPR020846 Major facilitator superfamily domain YPO1380 IPR011701 Major facilitator superfamily YPO1381 IPR034457 Organic radical-activating enzymes YPO1381 IPR007197 Radical SAM YPO1381 IPR034465 Pyruvate formate-lyase activase YPO1381 IPR001989 Radical-activating enzyme, conserved site YPO1381 IPR013785 Aldolase-type TIM barrel YPO1381 IPR012839 Organic radical enzyme activase YPO1381 IPR012838 Pyruvate formate-lyase 1 activating enzyme YPO1383 IPR005949 Formate acetyltransferase YPO1383 IPR001150 Glycine radical domain YPO1383 IPR019777 Formate C-acetyltransferase glycine radical, conserved site YPO1383 IPR004184 Pyruvate formate lyase domain YPO1384 IPR023271 Aquaporin-like YPO1384 IPR000292 Formate/nitrite transporter YPO1384 IPR024002 Formate/nitrite transporter, conserved site YPO1384 IPR023999 Formate transporter FocA, putative YPO1385 IPR041080 YcaO cyclodehydratase, C-terminal YPO1385 IPR003776 YcaO-like domain YPO1386 IPR006034 Asparaginase/glutaminase-like YPO1386 IPR027474 L-asparaginase, N-terminal YPO1386 IPR040919 Asparaginase/glutaminase, C-terminal YPO1386 IPR036152 Asparaginase/glutaminase-like superfamily YPO1386 IPR027473 L-asparaginase, C-terminal YPO1386 IPR027475 Asparaginase/glutaminase, active site 2 YPO1386 IPR020827 Asparaginase/glutaminase, active site 1 YPO1386 IPR037152 L-asparaginase, N-terminal domain superfamily YPO1386 IPR004550 L-asparaginase, type II YPO1387 IPR005594 YadA-like, C-terminal YPO1387 IPR024973 ESPR domain YPO1387 IPR011049 Serralysin-like metalloprotease, C-terminal YPO1387 IPR011049 Serralysin-like metalloprotease, C-terminal YPO1387 IPR024973 ESPR domain YPO1387 IPR008635 Coiled stalk of trimeric autotransporter adhesin YPO1387 IPR008640 Head domain of trimeric autotransporter adhesin YPO1387 IPR008635 Coiled stalk of trimeric autotransporter adhesin YPO1387 IPR005594 YadA-like, C-terminal YPO1387 IPR008640 Head domain of trimeric autotransporter adhesin YPO1389 IPR022278 Phosphoserine aminotransferase YPO1389 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPO1389 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPO1389 IPR015424 Pyridoxal phosphate-dependent transferase YPO1389 IPR000192 Aminotransferase class V domain YPO1389 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site YPO1390 IPR001986 Enolpyruvate transferase domain YPO1390 IPR036968 Enolpyruvate transferase domain superfamily YPO1390 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase YPO1390 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta YPO1390 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site YPO1391 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1391 IPR003136 Cytidylate kinase YPO1391 IPR011994 Cytidylate kinase domain YPO1392 IPR003029 S1 domain YPO1392 IPR022967 RNA-binding domain, S1 YPO1392 IPR000110 Ribosomal protein S1 YPO1392 IPR012340 Nucleic acid-binding, OB-fold YPO1393 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily YPO1393 IPR005685 Integration host factor, beta subunit YPO1393 IPR020816 Histone-like DNA-binding protein, conserved site YPO1393 IPR000119 Histone-like DNA-binding protein YPO1394 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YPO1394 IPR001279 Metallo-beta-lactamase YPO1394 IPR035681 ComA-like, MBL domain YPO1394 IPR004477 ComEC/Rec2-related protein YPO1394 IPR004797 Competence protein ComEC/Rec2 YPO1395 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPO1395 IPR011527 ABC transporter type 1, transmembrane domain YPO1395 IPR017871 ABC transporter, conserved site YPO1395 IPR003593 AAA+ ATPase domain YPO1395 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1395 IPR039421 Type I protein exporter YPO1395 IPR003439 ABC transporter-like YPO1395 IPR011917 ABC transporter, lipid A export, MsbA YPO1396 IPR003758 Tetraacyldisaccharide 4'-kinase YPO1396 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1397 IPR009770 Domain of unknown function DUF1338 YPO1398 IPR002059 Cold-shock protein, DNA-binding YPO1398 IPR012340 Nucleic acid-binding, OB-fold YPO1398 IPR011129 Cold shock domain YPO1398 IPR019844 Cold-shock (CSD) domain YPO1398 IPR012156 Cold shock, CspA YPO1399 IPR005651 Trm112-like YPO1400 IPR003329 Acylneuraminate cytidylyltransferase YPO1400 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase YPO1400 IPR029044 Nucleotide-diphospho-sugar transferases YPO1401 IPR002575 Aminoglycoside phosphotransferase YPO1401 IPR011009 Protein kinase-like domain superfamily YPO1402 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase YPO1402 IPR025714 Methyltransferase domain YPO1402 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO1403 IPR038198 MukF, C-terminal domain superfamily YPO1403 IPR036388 Winged helix-like DNA-binding domain superfamily YPO1403 IPR005582 Chromosome partition protein MukF YPO1403 IPR033439 Chromosome partition protein MukF, winged-helix domain YPO1403 IPR036141 MukF, middle domain superfamily YPO1403 IPR033441 Chromosome partition protein MukF, C-terminal domain YPO1403 IPR033440 Chromosome partition protein MukF, middle domain YPO1403 IPR010916 TonB box, conserved site YPO1403 IPR036390 Winged helix DNA-binding domain superfamily YPO1404 IPR042037 MukE, C-terminal domain YPO1404 IPR042038 MukE, N-terminal domain YPO1404 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE YPO1405 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1405 IPR012090 Chromosome partition protein MukB YPO1405 IPR007406 MukB, N-terminal domain YPO1405 IPR032520 MukB, hinge domain YPO1406 IPR002686 Transposase IS200-like YPO1406 IPR036515 Transposase IS200-like superfamily YPO1407 IPR002477 Peptidoglycan binding-like YPO1407 IPR038063 L,D-transpeptidase catalytic domain-like YPO1407 IPR005490 L,D-transpeptidase catalytic domain YPO1407 IPR036365 PGBD-like superfamily YPO1408 IPR006311 Twin-arginine translocation pathway, signal sequence YPO1408 IPR010275 Protein of unknown function DUF882 YPO1408 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily YPO1409 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YPO1409 IPR001279 Metallo-beta-lactamase YPO1410 IPR015424 Pyridoxal phosphate-dependent transferase YPO1410 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site YPO1410 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPO1410 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPO1410 IPR000796 Aspartate/other aminotransferase YPO1410 IPR004839 Aminotransferase, class I/classII YPO1411 IPR001897 Porin, gammaproteobacterial YPO1411 IPR001702 Porin, Gram-negative type YPO1411 IPR023614 Porin domain superfamily YPO1411 IPR013793 Porin, Gram-negative type, conserved site YPO1411 IPR033900 Porin domain, Gram-negative type YPO1412 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb YPO1412 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type YPO1412 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) YPO1412 IPR006195 Aminoacyl-tRNA synthetase, class II YPO1412 IPR012340 Nucleic acid-binding, OB-fold YPO1412 IPR004522 Asparagine-tRNA ligase YPO1413 IPR006406 Nicotinate phosphoribosyltransferase YPO1413 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain YPO1413 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal YPO1413 IPR007229 Nicotinate phosphoribosyltransferase family YPO1413 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase YPO1414 IPR027268 Peptidase M4/M1, CTD superfamily YPO1414 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase YPO1414 IPR014782 Peptidase M1, membrane alanine aminopeptidase YPO1414 IPR042097 Aminopeptidase N-like , N-terminal YPO1414 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold YPO1414 IPR012779 Peptidase M1, alanyl aminopeptidase YPO1414 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal YPO1414 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily YPO1414 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily YPO1415 IPR005720 Dihydroorotate dehydrogenase domain YPO1415 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 YPO1415 IPR013785 Aldolase-type TIM barrel YPO1415 IPR005719 Dihydroorotate dehydrogenase, class 2 YPO1415 IPR001295 Dihydroorotate dehydrogenase, conserved site YPO1416 IPR009809 Cell division protein ZapC YPO1417 IPR005303 MOSC, N-terminal beta barrel YPO1417 IPR011037 Pyruvate kinase-like, insert domain superfamily YPO1417 IPR005302 Molybdenum cofactor sulfurase, C-terminal YPO1417 IPR012675 Beta-grasp domain superfamily YPO1417 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site YPO1417 IPR036010 2Fe-2S ferredoxin-like superfamily YPO1417 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain YPO1418 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO1418 IPR004114 THUMP domain YPO1418 IPR019614 S-adenosylmethionine-dependent methyltransferase YPO1418 IPR017244 Ribosomal RNA large subunit methyltransferase K/L YPO1418 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPO1418 IPR000241 Putative RNA methylase domain YPO1419 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily YPO1419 IPR003593 AAA+ ATPase domain YPO1419 IPR032524 ABC transporter Uup, C-terminal YPO1419 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1419 IPR017871 ABC transporter, conserved site YPO1419 IPR032781 ABC-transporter extension domain YPO1419 IPR003439 ABC transporter-like YPO1420 IPR007498 Intermembrane transport protein PqiA-like YPO1420 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type YPO1421 IPR003399 Mce/MlaD YPO1422 IPR005586 ABC-type transport auxiliary lipoprotein component YPO1423a IPR007040 Ribosome modulation factor YPO1423a IPR023200 Ribosome modulation factor domain superfamily YPO1424 IPR002686 Transposase IS200-like YPO1424 IPR036515 Transposase IS200-like superfamily YPO1425a IPR018201 Beta-ketoacyl synthase, active site YPO1425a IPR014031 Beta-ketoacyl synthase, C-terminal YPO1425a IPR014030 Beta-ketoacyl synthase, N-terminal YPO1425a IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 YPO1425a IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPO1425a IPR016039 Thiolase-like YPO1425a IPR000794 Beta-ketoacyl synthase YPO1426 IPR003593 AAA+ ATPase domain YPO1426 IPR001270 ClpA/B family YPO1426 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO1426 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1426 IPR002611 IstB-like ATP-binding protein YPO1427 IPR017894 HTH domain, IS21 transposase-type YPO1427 IPR006120 Resolvase, HTH domain YPO1427 IPR012337 Ribonuclease H-like superfamily YPO1427 IPR001584 Integrase, catalytic core YPO1427 IPR036397 Ribonuclease H superfamily YPO1427b IPR016039 Thiolase-like YPO1427b IPR014030 Beta-ketoacyl synthase, N-terminal YPO1427b IPR014031 Beta-ketoacyl synthase, C-terminal YPO1427b IPR018201 Beta-ketoacyl synthase, active site YPO1427b IPR000794 Beta-ketoacyl synthase YPO1427b IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 YPO1427b IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPO1430 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA YPO1430 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ YPO1430 IPR029069 HotDog domain superfamily YPO1431 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPO1431 IPR041699 Lon protease, AAA domain YPO1431 IPR027065 Lon protease YPO1431 IPR008269 Peptidase S16, Lon proteolytic domain YPO1431 IPR020568 Ribosomal protein S5 domain 2-type fold YPO1433 IPR038339 MatP, N-terminal domain superfamily YPO1433 IPR035087 MatP, N-terminal YPO1433 IPR009390 Macrodomain Ter protein, MatP YPO1433 IPR013321 Arc-type ribbon-helix-helix YPO1433 IPR035375 MatP, C-terminal ribbon-helix-helix domain YPO1434 IPR002686 Transposase IS200-like YPO1434 IPR036515 Transposase IS200-like superfamily YPO1435 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YPO1435 IPR006664 Outer membrane protein, bacterial YPO1435 IPR002368 Outer membrane protein, OmpA YPO1435 IPR006665 OmpA-like domain YPO1435 IPR006690 Outer membrane protein, OmpA-like, conserved site YPO1435 IPR036737 OmpA-like domain superfamily YPO1435 IPR000498 Outer membrane protein OmpA-like, transmembrane domain YPO1436 IPR004596 Cell division suppressor protein, SulA YPO1436 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1437 IPR007077 TfoX, C-terminal YPO1437 IPR007076 TfoX, N-terminal YPO1437 IPR026256 Transcriptional regulator, TfoX/Sxy-type YPO1438 IPR032692 Integral membrane protein YccS, N-terminal YPO1438 IPR010020 Integral membrane protein, YccS/YhfK YPO1438 IPR010019 Integral membrane protein, YccS YPO1439 IPR031308 Uncharacterised conserved protein UCP028777 YPO1439 IPR005185 Inner membrane component domain YPO1440 IPR014016 UvrD-like helicase, ATP-binding domain YPO1440 IPR014017 UvrD-like DNA helicase, C-terminal YPO1440 IPR000212 DNA helicase, UvrD/REP type YPO1440 IPR022161 DNA helicase IV, N-terminal domain YPO1440 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1440 IPR034739 UvrD/AddA helicase, N-terminal YPO1441 IPR004363 Methylglyoxal synthase YPO1441 IPR018148 Methylglyoxal synthase, active site YPO1441 IPR011607 Methylglyoxal synthase-like domain YPO1441 IPR036914 Methylglyoxal synthase-like domain superfamily YPO1442 IPR018635 Uncharacterised protein family UPF0319 YPO1443 IPR036291 NAD(P)-binding domain superfamily YPO1443 IPR003781 CoA-binding YPO1444 IPR011722 Hemimethylated DNA-binding domain YPO1444 IPR036623 Hemimethylated DNA-binding domain superfamily YPO1444 IPR022866 Heat shock protein HspQ YPO1445 IPR019614 S-adenosylmethionine-dependent methyltransferase YPO1445 IPR002478 PUA domain YPO1445 IPR015947 PUA-like superfamily YPO1445 IPR036974 PUA domain superfamily YPO1445 IPR041532 RlmI, PUA-like domain YPO1445 IPR023542 rRNA large subunit methyltransferase I YPO1445 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO1446 IPR001792 Acylphosphatase-like domain YPO1446 IPR017968 Acylphosphatase, conserved site YPO1446 IPR020456 Acylphosphatase YPO1446 IPR036046 Acylphosphatase-like domain superfamily YPO1446 IPR028627 Acylphosphatase, bacteria YPO1447 IPR007453 Sulphur transfer protein DsrC/TusE YPO1447 IPR025526 DsrC-like domain superfamily YPO1447 IPR042072 DsrC-like protein, C-terminal domain YPO1450a IPR012337 Ribonuclease H-like superfamily YPO1450a IPR032874 DDE domain YPO1450a IPR036397 Ribonuclease H superfamily YPO1450a IPR001584 Integrase, catalytic core YPO1451 IPR016167 FAD-binding, type PCMH, subdomain 1 YPO1451 IPR036318 FAD-binding, type PCMH-like superfamily YPO1451 IPR006094 FAD linked oxidase, N-terminal YPO1451 IPR016169 FAD-binding, type PCMH, subdomain 2 YPO1451 IPR006093 Oxygen oxidoreductase covalent FAD-binding site YPO1451 IPR012951 Berberine/berberine-like YPO1451 IPR016164 FAD-linked oxidase-like, C-terminal YPO1451 IPR016166 FAD-binding domain, PCMH-type YPO1452 IPR036291 NAD(P)-binding domain superfamily YPO1452 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPO1452 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1452 IPR011294 3-hydroxybutyrate dehydrogenase YPO1454 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ YPO1454 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ YPO1454 IPR029069 HotDog domain superfamily YPO1455 IPR014031 Beta-ketoacyl synthase, C-terminal YPO1455 IPR016039 Thiolase-like YPO1455 IPR014030 Beta-ketoacyl synthase, N-terminal YPO1455 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 YPO1455 IPR018201 Beta-ketoacyl synthase, active site YPO1455 IPR000794 Beta-ketoacyl synthase YPO1455 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPO1456 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPO1456 IPR036291 NAD(P)-binding domain superfamily YPO1456 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1456 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase YPO1457 IPR013746 Hydroxymethylglutaryl-coenzyme A synthase C-terminal domain YPO1457 IPR013528 Hydroxymethylglutaryl-coenzyme A synthase, N-terminal YPO1457 IPR016039 Thiolase-like YPO1459 IPR001753 Enoyl-CoA hydratase/isomerase YPO1459 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site YPO1459 IPR029045 ClpP/crotonase-like domain superfamily YPO1460 IPR036291 NAD(P)-binding domain superfamily YPO1460 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPO1460 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1462 IPR009081 Phosphopantetheine binding ACP domain YPO1462 IPR036736 ACP-like superfamily YPO1463 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type YPO1463 IPR024925 Malonyl CoA-acyl carrier protein transacylase YPO1463 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding YPO1463 IPR001227 Acyl transferase domain superfamily YPO1463 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase YPO1463 IPR014043 Acyl transferase YPO1466 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath YPO1469 IPR006665 OmpA-like domain YPO1469 IPR006664 Outer membrane protein, bacterial YPO1469 IPR036737 OmpA-like domain superfamily YPO1469 IPR008722 Outer membrane porin F, N-terminal YPO1469 IPR006690 Outer membrane protein, OmpA-like, conserved site YPO1469 IPR028974 TSP type-3 repeat YPO1469 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YPO1471 IPR004176 Clp, N-terminal YPO1471 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1471 IPR041546 ClpA/ClpB, AAA lid domain YPO1471 IPR018368 ClpA/B, conserved site 1 YPO1471 IPR001270 ClpA/B family YPO1471 IPR003959 ATPase, AAA-type, core YPO1471 IPR017729 Type VI secretion system, ATPase ClpV1 YPO1471 IPR019489 Clp ATPase, C-terminal YPO1471 IPR036628 Clp, N-terminal domain superfamily YPO1471 IPR003593 AAA+ ATPase domain YPO1472 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPO1472 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPO1472 IPR037026 Vgr protein, OB-fold domain superfamily YPO1472 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal YPO1472 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain YPO1472 IPR006531 Gp5 N-terminal YPO1477a IPR025959 Winged helix-turn helix domain YPO1477a IPR038717 Tc1-like transposase, DDE domain YPO1477a IPR012337 Ribonuclease H-like superfamily YPO1477a IPR009057 Homeobox-like domain superfamily YPO1491 IPR003593 AAA+ ATPase domain YPO1491 IPR032781 ABC-transporter extension domain YPO1491 IPR003439 ABC transporter-like YPO1491 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1493 IPR001207 Transposase, mutator type YPO1494 IPR035985 Ubiquitin-activating enzyme YPO1494 IPR012730 Molybdopterin synthase sulfurylase MoeB YPO1494 IPR000594 THIF-type NAD/FAD binding fold YPO1495 IPR005111 MoeA, C-terminal, domain IV YPO1495 IPR036425 MoaB/Mog-like domain superfamily YPO1495 IPR038987 Molybdopterin biosynthesis protein MoeA-like YPO1495 IPR036688 MoeA, C-terminal, domain IV superfamily YPO1495 IPR005110 MoeA, N-terminal and linker domain YPO1495 IPR036135 MoeA, N-terminal and linker domain superfamily YPO1495 IPR001453 MoaB/Mog domain YPO1495 IPR008284 Molybdenum cofactor biosynthesis, conserved site YPO1497 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1497 IPR017871 ABC transporter, conserved site YPO1497 IPR003439 ABC transporter-like YPO1497 IPR003593 AAA+ ATPase domain YPO1498 IPR022824 Multidrug resistance protein MdtA YPO1498 IPR006143 RND efflux pump, membrane fusion protein YPO1498 IPR039562 Membrane fusion protein, biotin-lipoyl like domain YPO1501 IPR014186 S-formylglutathione hydrolase YPO1501 IPR000801 Putative esterase YPO1501 IPR029058 Alpha/Beta hydrolase fold YPO1502 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site YPO1502 IPR011032 GroES-like superfamily YPO1502 IPR014183 Alcohol dehydrogenase class III YPO1502 IPR036291 NAD(P)-binding domain superfamily YPO1502 IPR013154 Alcohol dehydrogenase, N-terminal YPO1502 IPR013149 Alcohol dehydrogenase, C-terminal YPO1502 IPR020843 Polyketide synthase, enoylreductase domain YPO1503 IPR005119 LysR, substrate-binding YPO1503 IPR000847 Transcription regulator HTH, LysR YPO1503 IPR036390 Winged helix DNA-binding domain superfamily YPO1503 IPR036388 Winged helix-like DNA-binding domain superfamily YPO1504 IPR010645 Uncharacterised MFS-type transporter YbfB YPO1504 IPR036259 MFS transporter superfamily YPO1505 IPR018234 GTP cyclohydrolase I, conserved site YPO1505 IPR001474 GTP cyclohydrolase I YPO1505 IPR020602 GTP cyclohydrolase I domain YPO1506 IPR007349 Domain of unknown function DUF418 YPO1507 IPR028082 Periplasmic binding protein-like I YPO1507 IPR025997 Periplasmic binding protein YPO1508 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1508 IPR015862 ABC transporter, galactose import, MglA YPO1508 IPR017871 ABC transporter, conserved site YPO1508 IPR003439 ABC transporter-like YPO1508 IPR003593 AAA+ ATPase domain YPO1509 IPR001851 ABC transporter, permease YPO1509 IPR030158 Galactoside transport system permease protein MglC YPO1510 IPR003848 Domain of unknown function DUF218 YPO1510 IPR023604 Uncharacterised protein family SanA YPO1511 IPR023667 NAD-dependent malic enzyme, proteobacteria YPO1511 IPR036291 NAD(P)-binding domain superfamily YPO1511 IPR001891 Malic oxidoreductase YPO1511 IPR012302 Malic enzyme, NAD-binding YPO1511 IPR037062 Malic enzyme, N-terminal domain superfamily YPO1511 IPR012301 Malic enzyme, N-terminal domain YPO1511 IPR015884 Malic enzyme, conserved site YPO1512 IPR006263 Cytidine deaminase, homodimeric YPO1512 IPR002125 Cytidine and deoxycytidylate deaminase domain YPO1512 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain YPO1512 IPR020797 Cytidine deaminase, bacteria YPO1512 IPR016192 APOBEC/CMP deaminase, zinc-binding YPO1512 IPR016193 Cytidine deaminase-like YPO1513 IPR005261 Conserved hypothetical protein CHP00659 YPO1513 IPR007300 CidB/LrgB family YPO1514 IPR005538 LrgA/CidA family YPO1514 IPR022957 Uncharacterised protein family UPF0299 YPO1515 IPR011701 Major facilitator superfamily YPO1515 IPR036259 MFS transporter superfamily YPO1515 IPR020846 Major facilitator superfamily domain YPO1519 IPR002611 IstB-like ATP-binding protein YPO1519 IPR003593 AAA+ ATPase domain YPO1519 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1519 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO1519 IPR001270 ClpA/B family YPO1520 IPR001584 Integrase, catalytic core YPO1520 IPR012337 Ribonuclease H-like superfamily YPO1520 IPR017894 HTH domain, IS21 transposase-type YPO1520 IPR036397 Ribonuclease H superfamily YPO1520 IPR006120 Resolvase, HTH domain YPO1521 IPR002686 Transposase IS200-like YPO1521 IPR036515 Transposase IS200-like superfamily YPO1522 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal YPO1522 IPR002547 tRNA-binding domain YPO1522 IPR033911 Methioninyl-tRNA synthetase core domain YPO1522 IPR023458 Methionine-tRNA ligase, type 1 YPO1522 IPR012340 Nucleic acid-binding, OB-fold YPO1522 IPR029038 Methionyl-tRNA synthetase, Zn-domain YPO1522 IPR014758 Methionyl-tRNA synthetase YPO1522 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO1522 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPO1522 IPR015413 Methionyl/Leucyl tRNA synthetase YPO1522 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding YPO1522 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain YPO1523 IPR019591 Mrp/NBP35 ATP-binding protein YPO1523 IPR000808 Mrp, conserved site YPO1523 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1523 IPR034904 Fe-S cluster assembly domain superfamily YPO1523 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 YPO1524 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1524 IPR006083 Phosphoribulokinase/uridine kinase YPO1524 IPR000764 Uridine kinase-like YPO1524 IPR026008 Uridine kinase YPO1525 IPR011962 dCTP deaminase YPO1525 IPR029054 dUTPase-like YPO1525 IPR036157 dUTPase-like superfamily YPO1525 IPR033704 dUTPase, trimeric YPO1526 IPR007844 AsmA YPO1527 IPR036318 FAD-binding, type PCMH-like superfamily YPO1527 IPR005170 Transporter-associated domain YPO1527 IPR000644 CBS domain YPO1527 IPR005496 Integral membrane protein TerC YPO1527 IPR016169 FAD-binding, type PCMH, subdomain 2 YPO1528 IPR022770 Ferric iron reductase FhuF domain YPO1528 IPR008090 Ferric iron reductase YPO1528 IPR024726 Ferric iron reductase, C-terminal YPO1529 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPO1529 IPR002129 Pyridoxal phosphate-dependent decarboxylase YPO1529 IPR021115 Pyridoxal-phosphate binding site YPO1529 IPR015424 Pyridoxal phosphate-dependent transferase YPO1530 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase YPO1530 IPR036188 FAD/NAD(P)-binding domain superfamily YPO1532 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal YPO1532 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like YPO1532 IPR022770 Ferric iron reductase FhuF domain YPO1533 IPR003593 AAA+ ATPase domain YPO1533 IPR003439 ABC transporter-like YPO1533 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1533 IPR017871 ABC transporter, conserved site YPO1534 IPR037294 ABC transporter, BtuC-like YPO1534 IPR000522 ABC transporter, permease protein, BtuC-like YPO1535 IPR037294 ABC transporter, BtuC-like YPO1535 IPR000522 ABC transporter, permease protein, BtuC-like YPO1536 IPR002491 ABC transporter periplasmic binding domain YPO1537 IPR011662 Secretin/TonB, short N-terminal domain YPO1537 IPR039423 TonB-dependent receptor-like YPO1537 IPR012910 TonB-dependent receptor, plug domain YPO1537 IPR037066 TonB-dependent receptor, plug domain superfamily YPO1537 IPR010917 TonB-dependent receptor, conserved site YPO1537 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YPO1537 IPR000531 TonB-dependent receptor-like, beta-barrel YPO1537 IPR010105 TonB-dependent siderophore receptor YPO1538 IPR022770 Ferric iron reductase FhuF domain YPO1538 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal YPO1538 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like YPO1539 IPR005835 Nucleotidyl transferase domain YPO1539 IPR029044 Nucleotide-diphospho-sugar transferases YPO1539 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type YPO1540 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type YPO1540 IPR005835 Nucleotidyl transferase domain YPO1540 IPR029044 Nucleotide-diphospho-sugar transferases YPO1541 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating YPO1541 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding YPO1541 IPR013328 6-phosphogluconate dehydrogenase, domain 2 YPO1541 IPR006114 6-phosphogluconate dehydrogenase, C-terminal YPO1541 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPO1541 IPR006184 6-phosphogluconate-binding site YPO1541 IPR006183 6-phosphogluconate dehydrogenase YPO1541 IPR036291 NAD(P)-binding domain superfamily YPO1542 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase YPO1542 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain YPO1542 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily YPO1542 IPR023019 Histidine biosynthesis bifunctional protein HisIE YPO1542 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like YPO1543 IPR013785 Aldolase-type TIM barrel YPO1543 IPR006062 Histidine biosynthesis YPO1543 IPR004651 Histidine biosynthesis, HisF YPO1543 IPR011060 Ribulose-phosphate binding barrel YPO1544 IPR006062 Histidine biosynthesis YPO1544 IPR011060 Ribulose-phosphate binding barrel YPO1544 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase YPO1544 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA YPO1544 IPR013785 Aldolase-type TIM barrel YPO1545 IPR017926 Glutamine amidotransferase YPO1545 IPR029062 Class I glutamine amidotransferase-like YPO1545 IPR010139 Imidazole glycerol phosphate synthase, subunit H YPO1546 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily YPO1546 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site YPO1546 IPR020566 Histidine biosynthesis bifunctional protein HisB YPO1546 IPR020568 Ribosomal protein S5 domain 2-type fold YPO1546 IPR023214 HAD superfamily YPO1546 IPR006549 HAD-superfamily hydrolase,subfamily IIIA YPO1546 IPR036412 HAD-like superfamily YPO1546 IPR005954 Histidinol-phosphatase YPO1546 IPR006543 Histidinol-phosphate phosphatase YPO1546 IPR000807 Imidazoleglycerol-phosphate dehydratase YPO1547 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site YPO1547 IPR004839 Aminotransferase, class I/classII YPO1547 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPO1547 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPO1547 IPR005861 Histidinol-phosphate aminotransferase family YPO1547 IPR015424 Pyridoxal phosphate-dependent transferase YPO1548 IPR012131 Histidinol dehydrogenase YPO1548 IPR016161 Aldehyde/histidinol dehydrogenase YPO1548 IPR022695 Histidinol dehydrogenase, monofunctional YPO1548 IPR001692 Histidinol dehydrogenase, conserved site YPO1549 IPR011322 Nitrogen regulatory PII-like, alpha/beta YPO1549 IPR001348 ATP phosphoribosyltransferase HisG YPO1549 IPR013115 Histidine biosynthesis HisG, C-terminal YPO1549 IPR013820 ATP phosphoribosyltransferase, catalytic domain YPO1549 IPR018198 ATP phosphoribosyltransferase, conserved site YPO1549 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal YPO1549 IPR020621 ATP phosphoribosyltransferase HisG, long form YPO1551 IPR001509 NAD-dependent epimerase/dehydratase YPO1551 IPR036291 NAD(P)-binding domain superfamily YPO1553 IPR001851 ABC transporter, permease YPO1556 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA YPO1556 IPR018211 Alcohol dehydrogenase, iron-type, conserved site YPO1556 IPR016205 Glycerol dehydrogenase YPO1557 IPR002293 Amino acid/polyamine transporter I YPO1558 IPR038649 Exonuclease I, SH3-like domain superfamily YPO1558 IPR034747 Exonuclease I, SH3-like domain YPO1558 IPR034748 Exonuclease I, C-terminal alpha-helical domain YPO1558 IPR023607 Exodeoxyribonuclease I YPO1558 IPR036397 Ribonuclease H superfamily YPO1558 IPR012337 Ribonuclease H-like superfamily YPO1558 IPR013520 Exonuclease, RNase T/DNA polymerase III YPO1558 IPR013620 Exodeoxyribonuclease I, C-terminal YPO1560 IPR007458 Protein of unknown function DUF496 YPO1561 IPR001207 Transposase, mutator type YPO1562 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO1562 IPR024519 Inverse autotransporter, beta-domain YPO1562 IPR038177 Inverse autotransporter, beta-domain superfamily YPO1562 IPR013783 Immunoglobulin-like fold YPO1562 IPR008964 Invasin/intimin cell-adhesion fragments YPO1562 IPR015217 Invasin, domain 3 YPO1562 IPR018392 LysM domain YPO1562 IPR022409 PKD/Chitinase domain YPO1562 IPR003535 Intimin/invasin bacterial adhesion mediator protein YPO1563 IPR020846 Major facilitator superfamily domain YPO1563 IPR011701 Major facilitator superfamily YPO1563 IPR036259 MFS transporter superfamily YPO1564 IPR007263 Protein of unknown function DUF393 YPO1565 IPR036291 NAD(P)-binding domain superfamily YPO1565 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPO1565 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1566 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily YPO1566 IPR011234 Fumarylacetoacetase-like, C-terminal YPO1567 IPR034610 L-fuconate dehydratase YPO1567 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal YPO1567 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain YPO1567 IPR029065 Enolase C-terminal domain-like YPO1567 IPR029017 Enolase-like, N-terminal YPO1567 IPR036849 Enolase-like, C-terminal domain superfamily YPO1569 IPR020920 L-lactate dehydrogenase, bacterial YPO1569 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site YPO1569 IPR037396 FMN hydroxy acid dehydrogenase domain YPO1569 IPR000262 FMN-dependent dehydrogenase YPO1569 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent YPO1569 IPR013785 Aldolase-type TIM barrel YPO1570 IPR001518 Argininosuccinate synthase YPO1570 IPR023437 Argininosuccinate synthase, type 2 subfamily YPO1570 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO1570 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail YPO1570 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body YPO1570 IPR018223 Argininosuccinate synthase, conserved site YPO1571 IPR002528 Multi antimicrobial extrusion protein YPO1573 IPR002509 NodB homology domain YPO1573 IPR037950 Peptidoglycan deacetylase PgdA-like YPO1573 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YPO1575 IPR018636 Protein of unknown function DUF2058 YPO1576 IPR011006 CheY-like superfamily YPO1576 IPR001789 Signal transduction response regulator, receiver domain YPO1576 IPR000792 Transcription regulator LuxR, C-terminal YPO1576 IPR016032 Signal transduction response regulator, C-terminal effector YPO1577 IPR004681 TRAP transporter large membrane protein DctM YPO1577 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit YPO1579 IPR004682 TRAP transporter solute receptor, DctP family YPO1579 IPR018389 TRAP transporter solute receptor DctP/TeaA YPO1579 IPR038404 TRAP transporter solute receptor DctP superfamily YPO1580 IPR041354 4'-phosphopantetheinyl transferase, N-terminal domain YPO1580 IPR003542 Enterobactin synthetase-like, component D YPO1580 IPR037143 4'-phosphopantetheinyl transferase domain superfamily YPO1580 IPR008278 4'-phosphopantetheinyl transferase domain YPO1581 IPR002252 Glycoside hydrolase family 36 YPO1581 IPR031704 Glycosyl hydrolase family 36, N-terminal YPO1581 IPR038417 Alpha-galactosidase, N-terminal domain superfamily YPO1581 IPR031705 Glycosyl hydrolase family 36, C-terminal YPO1581 IPR013785 Aldolase-type TIM barrel YPO1581 IPR000111 Glycoside hydrolase family 27/36, conserved site YPO1581 IPR017853 Glycoside hydrolase superfamily YPO1582 IPR036259 MFS transporter superfamily YPO1582 IPR000576 LacY/RafB permease family YPO1582 IPR018457 LacY/RafB permease family, conserved site YPO1582 IPR020846 Major facilitator superfamily domain YPO1583 IPR001207 Transposase, mutator type YPO1583a IPR025730 Biofilm regulator BssS YPO1584 IPR025730 Biofilm regulator BssS YPO1586 IPR036687 DinI-like superfamily YPO1586 IPR010391 DNA damage-inducible protein DinI-like YPO1587 IPR032466 Metal-dependent hydrolase YPO1587 IPR006680 Amidohydrolase-related YPO1587 IPR004721 Dihydroorotase homodimeric type YPO1587 IPR002195 Dihydroorotase, conserved site YPO1588 IPR007138 Antibiotic biosynthesis monooxygenase domain YPO1588 IPR011008 Dimeric alpha-beta barrel YPO1589 IPR001207 Transposase, mutator type YPO1590 IPR003029 S1 domain YPO1590 IPR022967 RNA-binding domain, S1 YPO1590 IPR004659 Ribonuclease E/G YPO1590 IPR028878 Ribonuclease E YPO1590 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G YPO1590 IPR021968 Polyribonucleotide phosphorylase C-terminal YPO1590 IPR012340 Nucleic acid-binding, OB-fold YPO1591 IPR006225 Pseudouridine synthase, RluC/RluD YPO1591 IPR020103 Pseudouridine synthase, catalytic domain superfamily YPO1591 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site YPO1591 IPR006145 Pseudouridine synthase, RsuA/RluA YPO1591 IPR036986 RNA-binding S4 domain superfamily YPO1591 IPR002942 RNA-binding S4 domain YPO1592 IPR036515 Transposase IS200-like superfamily YPO1592 IPR002686 Transposase IS200-like YPO1593 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein YPO1593 IPR029001 Inosine triphosphate pyrophosphatase-like YPO1594 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria YPO1594 IPR003772 Large ribosomal RNA subunit accumulation protein YceD YPO1595 IPR011332 Zinc-binding ribosomal protein YPO1595 IPR002677 Ribosomal protein L32p YPO1596 IPR012281 Phospholipid biosynthesis protein, PlsX-like YPO1596 IPR003664 Fatty acid synthesis PlsX protein YPO1597 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YPO1597 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal YPO1597 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 YPO1597 IPR016039 Thiolase-like YPO1598 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding YPO1598 IPR014043 Acyl transferase YPO1598 IPR001227 Acyl transferase domain superfamily YPO1598 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase YPO1598 IPR024925 Malonyl CoA-acyl carrier protein transacylase YPO1598 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type YPO1599 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase YPO1599 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPO1599 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1599 IPR036291 NAD(P)-binding domain superfamily YPO1600 IPR006162 Phosphopantetheine attachment site YPO1600 IPR009081 Phosphopantetheine binding ACP domain YPO1600 IPR036736 ACP-like superfamily YPO1600 IPR003231 Acyl carrier protein (ACP) YPO1601 IPR016039 Thiolase-like YPO1601 IPR014030 Beta-ketoacyl synthase, N-terminal YPO1601 IPR014031 Beta-ketoacyl synthase, C-terminal YPO1601 IPR018201 Beta-ketoacyl synthase, active site YPO1601 IPR000794 Beta-ketoacyl synthase YPO1601 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPO1601 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 YPO1602 IPR036515 Transposase IS200-like superfamily YPO1602 IPR002686 Transposase IS200-like YPO1603 IPR036038 Aminotransferase-like, PLP-dependent enzymes YPO1603 IPR018300 Aminotransferase, class IV, conserved site YPO1603 IPR001544 Aminotransferase class IV YPO1603 IPR017824 Aminodeoxychorismate lyase, class IV YPO1604 IPR003770 Endolytic murein transglycosylase YPO1605 IPR018095 Thymidylate kinase, conserved site YPO1605 IPR018094 Thymidylate kinase YPO1605 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1605 IPR039430 Thymidylate kinase-like domain YPO1606 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1606 IPR015199 DNA polymerase III, delta subunit, C-terminal YPO1606 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal YPO1606 IPR004622 DNA polymerase III, delta prime subunit YPO1607 IPR015991 Uncharacterised hydrolase TatD-type YPO1607 IPR018228 Deoxyribonuclease, TatD-related, conserved site YPO1607 IPR032466 Metal-dependent hydrolase YPO1607 IPR001130 TatD family YPO1608 IPR013013 Phosphotransferase system, EIIC component, type 1 YPO1608 IPR001996 Phosphotransferase system, IIB component, type 1 YPO1608 IPR011299 PTS system glucose-specific IIBC component YPO1608 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component YPO1608 IPR003352 Phosphotransferase system, EIIC YPO1608 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site YPO1608 IPR036878 Glucose permease domain IIB YPO1609 IPR002686 Transposase IS200-like YPO1609 IPR036515 Transposase IS200-like superfamily YPO1610 IPR036291 NAD(P)-binding domain superfamily YPO1610 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal YPO1611 IPR036265 HIT-like superfamily YPO1611 IPR019808 Histidine triad, conserved site YPO1611 IPR011146 HIT-like domain YPO1611 IPR001310 Histidine triad (HIT) protein YPO1612 IPR038483 YcfL-like superfamily YPO1612 IPR010824 Protein of unknown function DUF1425 YPO1613 IPR012640 Membrane lipoprotein, lipid attachment site YPO1613 IPR014094 Penicillin-binding protein activator LpoB YPO1614 IPR011009 Protein kinase-like domain superfamily YPO1614 IPR002575 Aminoglycoside phosphotransferase YPO1614 IPR014093 Thiamine kinase YPO1615 IPR022956 Beta-hexosaminidase, bacterial YPO1615 IPR019800 Glycoside hydrolase, family 3, active site YPO1615 IPR001764 Glycoside hydrolase, family 3, N-terminal YPO1615 IPR017853 Glycoside hydrolase superfamily YPO1615 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily YPO1616 IPR029058 Alpha/Beta hydrolase fold YPO1616 IPR022987 Uncharacterised protein family UPF0227 YPO1616 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA YPO1617 IPR023753 FAD/NAD(P)-binding domain YPO1617 IPR036188 FAD/NAD(P)-binding domain superfamily YPO1621 IPR001207 Transposase, mutator type YPO1622 IPR003593 AAA+ ATPase domain YPO1622 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO1622 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1622 IPR002611 IstB-like ATP-binding protein YPO1622 IPR001270 ClpA/B family YPO1623 IPR036397 Ribonuclease H superfamily YPO1623 IPR012337 Ribonuclease H-like superfamily YPO1623 IPR006120 Resolvase, HTH domain YPO1623 IPR017894 HTH domain, IS21 transposase-type YPO1623 IPR001584 Integrase, catalytic core YPO1624 IPR008816 Glycine zipper 2TM domain YPO1625 IPR041471 UvrB, interaction domain YPO1625 IPR037235 TRCF-like, C-terminal domain YPO1625 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1625 IPR004576 Transcription-repair coupling factor YPO1625 IPR001650 Helicase, C-terminal YPO1625 IPR005118 Transcription-repair-coupling factor, C-terminal domain YPO1625 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPO1625 IPR011545 DEAD/DEAH box helicase domain YPO1625 IPR003711 CarD-like/TRCF domain YPO1625 IPR036101 CarD-like/TRCF domain superfamily YPO1626 IPR025857 MacB-like periplasmic core domain YPO1626 IPR003838 ABC transporter permease protein domain YPO1626 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E YPO1627 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1627 IPR003439 ABC transporter-like YPO1627 IPR017871 ABC transporter, conserved site YPO1627 IPR003593 AAA+ ATPase domain YPO1627 IPR011924 Lipoprotein releasing system, ATP-binding protein YPO1627 IPR015854 ABC transporter, lipoprotein release, LolD YPO1628 IPR003838 ABC transporter permease protein domain YPO1628 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E YPO1628 IPR011926 Lipoprotein-releasing system transmembrane protein LolE, gammaproteobacteria type YPO1628 IPR025857 MacB-like periplasmic core domain YPO1629 IPR000600 ROK family YPO1630 IPR029035 DHS-like NAD/FAD-binding domain superfamily YPO1630 IPR026590 Sirtuin family, catalytic core domain YPO1630 IPR003000 Sirtuin family YPO1630 IPR027546 Sirtuin, class III YPO1630 IPR026591 Sirtuin, catalytic core small domain superfamily YPO1631 IPR011650 Peptidase M20, dimerisation domain YPO1631 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site YPO1631 IPR036264 Bacterial exopeptidase dimerisation domain YPO1631 IPR002933 Peptidase M20 YPO1631 IPR010161 Peptidase M20B, tripeptide aminopeptidase YPO1632 IPR003347 JmjC domain YPO1632 IPR039994 JmjC domain-containing YPO1633 IPR003660 HAMP domain YPO1633 IPR003594 Histidine kinase/HSP90-like ATPase YPO1633 IPR005467 Histidine kinase domain YPO1633 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPO1633 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPO1633 IPR015014 PhoQ Sensor YPO1633 IPR038429 PhoQ Sensor superfamily YPO1633 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPO1634 IPR011006 CheY-like superfamily YPO1634 IPR001789 Signal transduction response regulator, receiver domain YPO1634 IPR039420 Transcriptional regulatory protein WalR-like YPO1634 IPR036388 Winged helix-like DNA-binding domain superfamily YPO1634 IPR001867 OmpR/PhoB-type DNA-binding domain YPO1636 IPR000362 Fumarate lyase family YPO1636 IPR008948 L-Aspartase-like YPO1636 IPR020557 Fumarate lyase, conserved site YPO1636 IPR024083 Fumarase/histidase, N-terminal YPO1636 IPR013539 Adenylosuccinate lyase PurB, C-terminal YPO1636 IPR004769 Adenylosuccinate lyase YPO1636 IPR022761 Fumarate lyase, N-terminal YPO1637 IPR035932 HflD-like superfamily YPO1637 IPR007451 High frequency lysogenization protein HflD YPO1638 IPR023382 Adenine nucleotide alpha hydrolase-like domains YPO1638 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO1638 IPR004506 tRNA-specific 2-thiouridylase YPO1639 IPR020084 NUDIX hydrolase, conserved site YPO1639 IPR000086 NUDIX hydrolase domain YPO1639 IPR033713 Phosphatase NudJ YPO1639 IPR015797 NUDIX hydrolase-like domain superfamily YPO1639 IPR020476 NUDIX hydrolase YPO1640 IPR020103 Pseudouridine synthase, catalytic domain superfamily YPO1640 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain YPO1640 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F YPO1640 IPR006145 Pseudouridine synthase, RsuA/RluA YPO1640 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site YPO1641 IPR024084 Isopropylmalate dehydrogenase-like domain YPO1641 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic YPO1641 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site YPO1642 IPR000843 LacI-type HTH domain YPO1642 IPR028082 Periplasmic binding protein-like I YPO1642 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPO1642 IPR001761 Periplasmic binding protein/LacI sugar binding domain YPO1644 IPR004090 Chemotaxis methyl-accepting receptor YPO1644 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YPO1644 IPR001610 PAC motif YPO1644 IPR000014 PAS domain YPO1644 IPR035965 PAS domain superfamily YPO1644 IPR013655 PAS fold-3 YPO1644 IPR003660 HAMP domain YPO1645 IPR036291 NAD(P)-binding domain superfamily YPO1645 IPR008030 NmrA-like domain YPO1646 IPR036390 Winged helix DNA-binding domain superfamily YPO1646 IPR036388 Winged helix-like DNA-binding domain superfamily YPO1646 IPR002577 Helix-turn-helix, HxlR type YPO1648 IPR000560 Histidine phosphatase superfamily, clade-2 YPO1648 IPR033379 Histidine acid phosphatase active site YPO1648 IPR029033 Histidine phosphatase superfamily YPO1649 IPR017704 Putative selenium-binding protein YdfZ YPO1651 IPR000485 AsnC-type HTH domain YPO1651 IPR011008 Dimeric alpha-beta barrel YPO1651 IPR036388 Winged helix-like DNA-binding domain superfamily YPO1651 IPR036390 Winged helix DNA-binding domain superfamily YPO1651 IPR011991 ArsR-like helix-turn-helix domain YPO1651 IPR019888 Transcription regulator AsnC-type YPO1651 IPR019885 Transcription regulator HTH, AsnC-type, conserved site YPO1651 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain YPO1652 IPR019713 Inner membrane protein YlaC YPO1653 IPR020843 Polyketide synthase, enoylreductase domain YPO1653 IPR042104 Polyketide synthase, dehydratase domain superfamily YPO1653 IPR020807 Polyketide synthase, dehydratase domain YPO1653 IPR036736 ACP-like superfamily YPO1653 IPR014043 Acyl transferase YPO1653 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase YPO1653 IPR013154 Alcohol dehydrogenase, N-terminal YPO1653 IPR011032 GroES-like superfamily YPO1653 IPR018201 Beta-ketoacyl synthase, active site YPO1653 IPR014031 Beta-ketoacyl synthase, C-terminal YPO1653 IPR014030 Beta-ketoacyl synthase, N-terminal YPO1653 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding YPO1653 IPR036291 NAD(P)-binding domain superfamily YPO1653 IPR013968 Polyketide synthase, ketoreductase domain YPO1653 IPR013149 Alcohol dehydrogenase, C-terminal YPO1653 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPO1653 IPR009081 Phosphopantetheine binding ACP domain YPO1653 IPR016039 Thiolase-like YPO1653 IPR020806 Polyketide synthase, phosphopantetheine-binding domain YPO1653 IPR032821 Ketoacyl-synthetase, C-terminal extension YPO1654 IPR006101 Glycoside hydrolase, family 2 YPO1654 IPR004199 Beta galactosidase small chain/ domain 5 YPO1654 IPR032312 Beta-galactosidase, domain 4 YPO1654 IPR013783 Immunoglobulin-like fold YPO1654 IPR017853 Glycoside hydrolase superfamily YPO1654 IPR023232 Glycoside hydrolase, family 2, active site YPO1654 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich YPO1654 IPR006104 Glycosyl hydrolases family 2, sugar binding domain YPO1654 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase YPO1654 IPR006103 Glycoside hydrolase family 2, catalytic domain YPO1654 IPR014718 Glycoside hydrolase-type carbohydrate-binding YPO1654 IPR023230 Glycoside hydrolase, family 2, conserved site YPO1654 IPR011013 Galactose mutarotase-like domain superfamily YPO1654 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily YPO1654 IPR008979 Galactose-binding-like domain superfamily YPO1655 IPR012156 Cold shock, CspA YPO1655 IPR011129 Cold shock domain YPO1655 IPR019844 Cold-shock (CSD) domain YPO1655 IPR002059 Cold-shock protein, DNA-binding YPO1655 IPR012340 Nucleic acid-binding, OB-fold YPO1656 IPR019717 Dextransucrase DSRB YPO1660 IPR003416 MgtC/SapB/SrpB/YhiD family YPO1661 IPR001757 P-type ATPase YPO1661 IPR023214 HAD superfamily YPO1661 IPR036412 HAD-like superfamily YPO1661 IPR008250 P-type ATPase, A domain superfamily YPO1661 IPR018303 P-type ATPase, phosphorylation site YPO1661 IPR004014 Cation-transporting P-type ATPase, N-terminal YPO1661 IPR006068 Cation-transporting P-type ATPase, C-terminal YPO1661 IPR006415 P-type ATPase, subfamily IIIB YPO1661 IPR023298 P-type ATPase, transmembrane domain superfamily YPO1661 IPR023299 P-type ATPase, cytoplasmic domain N YPO1663 IPR007944 Flagellar transcriptional activator FlhC YPO1664 IPR000540 Flagellar motor protein MotA, conserved site YPO1664 IPR022522 Flagellar motor stator, MotA YPO1664 IPR002898 MotA/TolQ/ExbB proton channel YPO1665 IPR025713 Motility protein B, N-terminal domain YPO1665 IPR006665 OmpA-like domain YPO1665 IPR036737 OmpA-like domain superfamily YPO1666 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPO1666 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain YPO1666 IPR036641 HPT domain superfamily YPO1666 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPO1666 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPO1666 IPR003594 Histidine kinase/HSP90-like ATPase YPO1666 IPR005467 Histidine kinase domain YPO1666 IPR015162 CheY binding YPO1666 IPR002545 CheW-like domain YPO1666 IPR036061 CheW-like domain superfamily YPO1666 IPR004105 Histidine kinase CheA-like, homodimeric domain YPO1666 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily YPO1666 IPR035891 CheY-binding domain of CheA YPO1667 IPR039315 Chemotaxis protein CheW YPO1667 IPR002545 CheW-like domain YPO1667 IPR036061 CheW-like domain superfamily YPO1668 IPR011701 Major facilitator superfamily YPO1668 IPR020846 Major facilitator superfamily domain YPO1668 IPR036259 MFS transporter superfamily YPO1669 IPR019897 RidA, conserved site YPO1669 IPR035959 RutC-like superfamily YPO1669 IPR006175 YjgF/YER057c/UK114 family YPO1669 IPR006056 RidA family YPO1671 IPR013559 YheO-like YPO1671 IPR039445 Transcriptional regulator DauR-like, HTH domain YPO1671 IPR039446 Transcriptional regulator DauR-like YPO1672 IPR006315 Outer membrane autotransporter barrel YPO1672 IPR011050 Pectin lyase fold/virulence factor YPO1672 IPR013425 Autotransporter-associated beta strand repeat YPO1672 IPR036709 Autotransporter beta-domain superfamily YPO1672 IPR005546 Autotransporter beta-domain YPO1672 IPR012332 P22 tailspike-like, C-terminal domain superfamily YPO1675 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily YPO1675 IPR004090 Chemotaxis methyl-accepting receptor YPO1675 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site YPO1675 IPR003660 HAMP domain YPO1675 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YPO1675 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding YPO1678 IPR000780 MCP methyltransferase, CheR-type YPO1678 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO1678 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily YPO1678 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal YPO1678 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal YPO1678 IPR026024 Chemotaxis protein methyltransferase CheR YPO1679 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type YPO1679 IPR001789 Signal transduction response regulator, receiver domain YPO1679 IPR035909 Methylesterase CheB, C-terminal YPO1679 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase YPO1679 IPR011006 CheY-like superfamily YPO1680 IPR011006 CheY-like superfamily YPO1680 IPR001789 Signal transduction response regulator, receiver domain YPO1681 IPR007439 Chemotaxis phosphatase, CheZ YPO1683 IPR036365 PGBD-like superfamily YPO1683 IPR002502 N-acetylmuramoyl-L-alanine amidase domain YPO1683 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily YPO1683 IPR036366 PGBD superfamily YPO1684 IPR008635 Coiled stalk of trimeric autotransporter adhesin YPO1684 IPR011049 Serralysin-like metalloprotease, C-terminal YPO1684 IPR005594 YadA-like, C-terminal YPO1684 IPR024973 ESPR domain YPO1684 IPR008640 Head domain of trimeric autotransporter adhesin YPO1687 IPR029066 PLP-binding barrel YPO1687 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal YPO1687 IPR000821 Alanine racemase YPO1687 IPR011079 Alanine racemase, C-terminal YPO1687 IPR001608 Alanine racemase, N-terminal YPO1687 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site YPO1691 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1691 IPR003593 AAA+ ATPase domain YPO1691 IPR001270 ClpA/B family YPO1691 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO1691 IPR002611 IstB-like ATP-binding protein YPO1692 IPR017894 HTH domain, IS21 transposase-type YPO1692 IPR006120 Resolvase, HTH domain YPO1692 IPR001584 Integrase, catalytic core YPO1692 IPR036397 Ribonuclease H superfamily YPO1692 IPR012337 Ribonuclease H-like superfamily YPO1694 IPR009950 Protein of unknown function DUF1480 YPO1697 IPR013783 Immunoglobulin-like fold YPO1697 IPR018046 Pili assembly chaperone, conserved site YPO1697 IPR016148 Pili assembly chaperone, C-terminal YPO1697 IPR001829 Pili assembly chaperone, bacterial YPO1697 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YPO1697 IPR016147 Pili assembly chaperone, N-terminal YPO1697 IPR008962 PapD-like superfamily YPO1701 IPR003399 Mce/MlaD YPO1702 IPR007498 Intermembrane transport protein PqiA-like YPO1702 IPR011031 Multihaem cytochrome YPO1702 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type YPO1703 IPR003018 GAF domain YPO1703 IPR000614 Free Met sulfoxide reductase conserved site YPO1703 IPR029016 GAF-like domain superfamily YPO1704 IPR036442 ProQ/FinO domain superfamily YPO1704 IPR035236 RNA chaperone ProQ, C-terminal YPO1704 IPR016103 ProQ/FinO domain YPO1704 IPR023529 RNA chaperone ProQ YPO1705 IPR020992 Tail specific protease, C-terminal YPO1705 IPR029045 ClpP/crotonase-like domain superfamily YPO1705 IPR005151 Tail specific protease YPO1705 IPR004447 C-terminal-processing peptidase S41A YPO1705 IPR036034 PDZ superfamily YPO1705 IPR001478 PDZ domain YPO1705 IPR040573 Tail specific protease, N-terminal domain YPO1706 IPR022919 Peptidase M48, protease HtpX, putative YPO1706 IPR001915 Peptidase M48 YPO1707 IPR008966 Adhesion domain superfamily YPO1707 IPR036937 Fimbrial-type adhesion domain superfamily YPO1707 IPR000259 Fimbrial-type adhesion domain YPO1708 IPR016148 Pili assembly chaperone, C-terminal YPO1708 IPR018046 Pili assembly chaperone, conserved site YPO1708 IPR016147 Pili assembly chaperone, N-terminal YPO1708 IPR001829 Pili assembly chaperone, bacterial YPO1708 IPR013783 Immunoglobulin-like fold YPO1708 IPR008962 PapD-like superfamily YPO1708 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YPO1709 IPR042186 Outer membrane usher protein FimD, plug domain YPO1709 IPR037224 PapC, N-terminal domain superfamily YPO1709 IPR018030 Fimbrial membrane usher, conserved site YPO1709 IPR000015 Outer membrane usher protein YPO1709 IPR025885 PapC, N-terminal domain YPO1709 IPR025949 PapC-like, C-terminal domain YPO1711 IPR013783 Immunoglobulin-like fold YPO1711 IPR016147 Pili assembly chaperone, N-terminal YPO1711 IPR018046 Pili assembly chaperone, conserved site YPO1711 IPR008962 PapD-like superfamily YPO1711 IPR001829 Pili assembly chaperone, bacterial YPO1711 IPR016148 Pili assembly chaperone, C-terminal YPO1711 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YPO1712 IPR020846 Major facilitator superfamily domain YPO1712 IPR036259 MFS transporter superfamily YPO1712 IPR011701 Major facilitator superfamily YPO1713 IPR027946 Oligogalacturonate lyase domain YPO1713 IPR015943 WD40/YVTN repeat-like-containing domain superfamily YPO1714 IPR036390 Winged helix DNA-binding domain superfamily YPO1714 IPR036388 Winged helix-like DNA-binding domain superfamily YPO1714 IPR005471 Transcription regulator IclR, N-terminal YPO1714 IPR014757 Transcription regulator IclR, C-terminal YPO1714 IPR011991 ArsR-like helix-turn-helix domain YPO1714 IPR029016 GAF-like domain superfamily YPO1715 IPR036365 PGBD-like superfamily YPO1715 IPR036366 PGBD superfamily YPO1715 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily YPO1715 IPR002502 N-acetylmuramoyl-L-alanine amidase domain YPO1716 IPR036458 Sodium:dicarboxylate symporter superfamily YPO1716 IPR001991 Sodium:dicarboxylate symporter YPO1717 IPR016956 Inner membrane protein YdjM YPO1717 IPR007404 LexA-binding, inner membrane-associated putative hydrolase YPO1718 IPR009331 Oligogalacturonate-specific porin YPO1719 IPR006059 Bacterial extracellular solute-binding protein YPO1720 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1720 IPR005116 Transport-associated OB, type 1 YPO1720 IPR008995 Molybdate/tungstate binding, C-terminal YPO1720 IPR040582 MalK, OB fold domain YPO1720 IPR017871 ABC transporter, conserved site YPO1720 IPR003439 ABC transporter-like YPO1720 IPR003593 AAA+ ATPase domain YPO1721 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO1721 IPR035906 MetI-like superfamily YPO1722 IPR035906 MetI-like superfamily YPO1722 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO1723 IPR010702 Periplasmic pectate lyase YPO1724 IPR036291 NAD(P)-binding domain superfamily YPO1724 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPO1724 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1724 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase YPO1725 IPR011051 RmlC-like cupin domain superfamily YPO1725 IPR014710 RmlC-like jelly roll fold YPO1725 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal YPO1725 IPR021120 KduI/IolB isomerase YPO1725 IPR007045 5-keto 4-deoxyuronate isomerase YPO1726 IPR025499 Pectin degradation protein KdgF YPO1726 IPR011051 RmlC-like cupin domain superfamily YPO1726 IPR014710 RmlC-like jelly roll fold YPO1726 IPR013096 Cupin 2, conserved barrel YPO1727 IPR001207 Transposase, mutator type YPO1729 IPR017894 HTH domain, IS21 transposase-type YPO1729 IPR036397 Ribonuclease H superfamily YPO1729 IPR012337 Ribonuclease H-like superfamily YPO1729 IPR006120 Resolvase, HTH domain YPO1729 IPR001584 Integrase, catalytic core YPO1730 IPR001270 ClpA/B family YPO1730 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1730 IPR002611 IstB-like ATP-binding protein YPO1730 IPR003593 AAA+ ATPase domain YPO1730 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO1732 IPR024079 Metallopeptidase, catalytic domain superfamily YPO1732 IPR042252 MtfA, N-terminal YPO1732 IPR010384 MtfA family YPO1735 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPO1735 IPR003439 ABC transporter-like YPO1735 IPR017871 ABC transporter, conserved site YPO1735 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1735 IPR011527 ABC transporter type 1, transmembrane domain YPO1735 IPR003593 AAA+ ATPase domain YPO1735 IPR039421 Type I protein exporter YPO1737 IPR009057 Homeobox-like domain superfamily YPO1737 IPR018060 DNA binding HTH domain, AraC-type YPO1737 IPR018062 HTH domain AraC-type, conserved site YPO1737 IPR020449 Transcription regulator HTH, AraC- type YPO1738 IPR020262 Uncharacterised protein family YecJ YPO1739 IPR025611 YobH-like protein YPO1740 IPR025594 YebO-like protein YPO1743 IPR004840 Amino acid permease, conserved site YPO1743 IPR004841 Amino acid permease/ SLC12A domain YPO1744 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YPO1744 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP YPO1745 IPR019672 Protein of unknown function DUF2627 YPO1746 IPR002059 Cold-shock protein, DNA-binding YPO1746 IPR019844 Cold-shock (CSD) domain YPO1746 IPR011129 Cold shock domain YPO1746 IPR012156 Cold shock, CspA YPO1746 IPR012340 Nucleic acid-binding, OB-fold YPO1747 IPR011324 Cytotoxic necrotizing factor-like, catalytic YPO1747 IPR038371 Multi-copper polyphenol oxidoreductase superfamily YPO1747 IPR003730 Multi-copper polyphenol oxidoreductase YPO1748 IPR025714 Methyltransferase domain YPO1748 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted YPO1748 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO1750 IPR017894 HTH domain, IS21 transposase-type YPO1750 IPR036397 Ribonuclease H superfamily YPO1750 IPR001584 Integrase, catalytic core YPO1750 IPR006120 Resolvase, HTH domain YPO1750 IPR012337 Ribonuclease H-like superfamily YPO1751 IPR003593 AAA+ ATPase domain YPO1751 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1751 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO1751 IPR001270 ClpA/B family YPO1751 IPR002611 IstB-like ATP-binding protein YPO1751a IPR013656 PAS fold-4 YPO1751a IPR035965 PAS domain superfamily YPO1751a IPR000700 PAS-associated, C-terminal YPO1751a IPR029787 Nucleotide cyclase YPO1751a IPR007895 MASE1 YPO1751a IPR000160 GGDEF domain YPO1751a IPR035919 EAL domain superfamily YPO1751a IPR001633 EAL domain YPO1751a IPR000014 PAS domain YPO1751a IPR001610 PAC motif YPO1751a IPR013655 PAS fold-3 YPO1753 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YPO1753 IPR010917 TonB-dependent receptor, conserved site YPO1753 IPR030149 TonB-dependent siderophore receptor FcuA/FatA YPO1753 IPR012910 TonB-dependent receptor, plug domain YPO1753 IPR037066 TonB-dependent receptor, plug domain superfamily YPO1753 IPR039423 TonB-dependent receptor-like YPO1753 IPR010105 TonB-dependent siderophore receptor YPO1753 IPR010916 TonB box, conserved site YPO1753 IPR000531 TonB-dependent receptor-like, beta-barrel YPO1754 IPR022929 Putative manganese efflux pump MntP YPO1754 IPR003810 Putative manganese efflux pump YPO1755 IPR009328 Protein of unknown function DUF986 YPO1756 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component YPO1757 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit YPO1758 IPR013789 Phosphotransferase system, mannose family IIA component YPO1758 IPR004701 Phosphotransferase system, mannose-type IIA component YPO1758 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup YPO1758 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily YPO1758 IPR004720 Phosphotransferase system, sorbose subfamily IIB component YPO1758 IPR033887 PTS system mannose/sorbose specific IIA subunit YPO1758 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily YPO1760 IPR012712 HTH-type transcriptional regulator HpaR/FarR YPO1760 IPR023187 Transcriptional regulator MarR-type, conserved site YPO1760 IPR036390 Winged helix DNA-binding domain superfamily YPO1760 IPR000835 MarR-type HTH domain YPO1760 IPR036388 Winged helix-like DNA-binding domain superfamily YPO1761 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit YPO1761 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit YPO1761 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily YPO1761 IPR011234 Fumarylacetoacetase-like, C-terminal YPO1761a IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit YPO1761a IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit YPO1761a IPR011234 Fumarylacetoacetase-like, C-terminal YPO1761a IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily YPO1763 IPR011985 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase YPO1763 IPR015590 Aldehyde dehydrogenase domain YPO1763 IPR016162 Aldehyde dehydrogenase, N-terminal YPO1763 IPR029510 Aldehyde dehydrogenase, glutamic acid active site YPO1763 IPR016160 Aldehyde dehydrogenase, cysteine active site YPO1763 IPR016161 Aldehyde/histidinol dehydrogenase YPO1763 IPR016163 Aldehyde dehydrogenase, C-terminal YPO1764 IPR011984 3,4-dihydroxyphenylacetate 2,3-dioxygenase YPO1764 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B YPO1765 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase YPO1765 IPR014347 Tautomerase/MIF superfamily YPO1766 IPR011234 Fumarylacetoacetase-like, C-terminal YPO1766 IPR012690 2-oxo-hepta-4-ene-1,7-dioic acid hydratase YPO1766 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily YPO1767 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase YPO1767 IPR005000 HpcH/HpaI aldolase/citrate lyase domain YPO1767 IPR023701 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase, Enterobacteriales YPO1767 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily YPO1767 IPR040442 Pyruvate kinase-like domain superfamily YPO1768 IPR020846 Major facilitator superfamily domain YPO1768 IPR011701 Major facilitator superfamily YPO1768 IPR036259 MFS transporter superfamily YPO1769 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily YPO1769 IPR012688 4-HPA 3-monooxygenase large component, gammaproteobacteria YPO1769 IPR024674 HpaB/PvcC/4-BUDH N-terminal YPO1769 IPR024719 HpaB/PvcC/4-BUDH C-terminal YPO1769 IPR004925 HpaB/PvcC/4-BUDH YPO1769 IPR024677 4-HPA 3-monooxygenase large component/Pyoverdin chromophore biosynthetic protein YPO1769 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal YPO1770 IPR012349 FMN-binding split barrel YPO1770 IPR002563 Flavin reductase like domain YPO1770 IPR011982 4-hydroxyphenylacetate 3-monooxygenase, reductase component YPO1771 IPR029009 Allosteric substrate binding domain superfamily YPO1771 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form YPO1771 IPR005130 Serine dehydratase-like, alpha subunit YPO1771 IPR005131 Serine dehydratase beta chain YPO1772 IPR000086 NUDIX hydrolase domain YPO1772 IPR000059 NUDIX hydrolase, NudL, conserved site YPO1772 IPR015797 NUDIX hydrolase-like domain superfamily YPO1772 IPR023735 Uncharacterised nudix hydrolase NudL YPO1773 IPR006805 Anthranilate synthase component I, N-terminal YPO1773 IPR015890 Chorismate-utilising enzyme, C-terminal YPO1773 IPR005802 Aminodeoxychorismate synthase, component I YPO1773 IPR005801 ADC synthase YPO1773 IPR019999 Anthranilate synthase component I-like YPO1774 IPR005371 Uncharacterised protein family UPF0181 YPO1775 IPR013815 ATP-grasp fold, subdomain 1 YPO1775 IPR016185 Pre-ATP-grasp domain superfamily YPO1775 IPR011054 Rudiment single hybrid motif YPO1775 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase YPO1775 IPR011761 ATP-grasp fold YPO1775 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type YPO1776 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily YPO1776 IPR001650 Helicase, C-terminal YPO1776 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPO1776 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site YPO1776 IPR014014 RNA helicase, DEAD-box type, Q motif YPO1776 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain YPO1776 IPR011545 DEAD/DEAH box helicase domain YPO1776 IPR028619 ATP-dependent RNA helicase DbpA YPO1776 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1777 IPR009813 Uncharacterised protein family YebG YPO1777 IPR038627 YebG-like superfamily YPO1778 IPR008314 Uncharacterised conserved protein UCP029143 YPO1778 IPR015947 PUA-like superfamily YPO1778 IPR007374 ASCH domain YPO1779 IPR025603 YebF/Colicin-M immunity protein YPO1779 IPR038703 YebF/Cmi superfamily YPO1779 IPR020236 Uncharacterised protein family YebF YPO1780 IPR002471 Peptidase S9, serine active site YPO1780 IPR023302 Peptidase S9A, N-terminal domain YPO1780 IPR029058 Alpha/Beta hydrolase fold YPO1780 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain YPO1780 IPR002470 Peptidase S9A, prolyl oligopeptidase YPO1781 IPR005944 Proline iminopeptidase YPO1781 IPR002410 Peptidase S33 YPO1781 IPR000073 Alpha/beta hydrolase fold-1 YPO1781 IPR029058 Alpha/Beta hydrolase fold YPO1782 IPR009052 DNA polymerase III-theta, bacterial YPO1782 IPR036745 DNA polymerase III-theta superfamily YPO1783 IPR041719 Ferritin, prokaryotic-type YPO1783 IPR008331 Ferritin/DPS protein domain YPO1783 IPR009078 Ferritin-like superfamily YPO1783 IPR012347 Ferritin-like YPO1783 IPR009040 Ferritin-like diiron domain YPO1783 IPR001519 Ferritin YPO1784 IPR014756 Immunoglobulin E-set YPO1784 IPR032694 Copper transport protein C/D YPO1784 IPR007348 CopC domain YPO1786 IPR019648 Protein of unknown function DUF2511 YPO1790 IPR006135 Type III secretion system substrate exporter YPO1790 IPR006136 Flagellar biosynthetic protein FlhB YPO1790 IPR029025 Type III secretion system substrate exporter, C-terminal YPO1791 IPR001712 Type III secretion system FHIPEP YPO1791 IPR006301 Flagellar biosynthesis protein FlhA YPO1791 IPR025505 FHIPEP conserved site YPO1791 IPR042196 FHIPEP, domain 4 YPO1791 IPR042194 FHIPEP, domain 1 YPO1791 IPR042193 FHIPEP, domain 3 YPO1792 IPR009420 Flagellar protein FlhE YPO1794 IPR002686 Transposase IS200-like YPO1794 IPR036515 Transposase IS200-like superfamily YPO1796 IPR007809 FlgN-like protein YPO1796 IPR036679 FlgN-like superfamily YPO1797 IPR007412 Anti-sigma-28 factor, FlgM YPO1797 IPR035890 Anti-sigma-28 factor FlgM superfamily YPO1797 IPR031316 Anti-sigma-28 factor FlgM, C-terminal YPO1798 IPR013974 SAF domain YPO1798 IPR041231 FlgA, N-terminal YPO1798 IPR039246 Flagellar protein FlgA YPO1798 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal YPO1799 IPR001444 Flagellar basal body rod protein, N-terminal YPO1799 IPR006300 Flagellar basal-body rod protein FlgB YPO1799 IPR019776 Flagellar basal body rod protein, conserved site YPO1800 IPR001444 Flagellar basal body rod protein, N-terminal YPO1800 IPR019776 Flagellar basal body rod protein, conserved site YPO1800 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPO1800 IPR006299 Flagellar basal-body rod protein FlgC YPO1801 IPR025965 FlgD Ig-like domain YPO1801 IPR025963 FlgD Tudor-like domain YPO1801 IPR005648 Flagellar hook capping protein YPO1802 IPR001444 Flagellar basal body rod protein, N-terminal YPO1802 IPR020013 Flagellar hook-basal body protein, FlgE/F/G YPO1802 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPO1802 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like YPO1802 IPR011491 Flagellar hook protein FlgE YPO1802 IPR037058 Flagellar hook protein FlgE superfamily YPO1802 IPR019776 Flagellar basal body rod protein, conserved site YPO1803 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPO1803 IPR001444 Flagellar basal body rod protein, N-terminal YPO1803 IPR019776 Flagellar basal body rod protein, conserved site YPO1803 IPR020013 Flagellar hook-basal body protein, FlgE/F/G YPO1803 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like YPO1804 IPR001444 Flagellar basal body rod protein, N-terminal YPO1804 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like YPO1804 IPR012834 Flagellar basal-body rod FlgG YPO1804 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPO1804 IPR019776 Flagellar basal body rod protein, conserved site YPO1804 IPR020013 Flagellar hook-basal body protein, FlgE/F/G YPO1805 IPR000527 Flagellar L-ring protein YPO1806 IPR001782 Flagellar P-ring protein YPO1807 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain YPO1807 IPR013377 Peptidoglycan hydrolase FlgJ YPO1807 IPR019301 Flagellar protein FlgJ, N-terminal YPO1808 IPR001444 Flagellar basal body rod protein, N-terminal YPO1808 IPR002371 Flagellar hook-associated protein 1 YPO1808 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPO1809 IPR013384 Flagellar hook-associated protein 3 YPO1809 IPR001029 Flagellin, D0/D1 domain YPO1810 IPR037171 NagB/RpiA transferase-like YPO1810 IPR036388 Winged helix-like DNA-binding domain superfamily YPO1810 IPR013324 RNA polymerase sigma factor, region 3/4-like YPO1810 IPR007324 Sugar-binding domain, putative YPO1811 IPR001303 Class II aldolase/adducin N-terminal YPO1811 IPR036409 Class II aldolase/adducin N-terminal domain superfamily YPO1811 IPR013454 Bifunctional rhamnulose-1-phosphate aldolase/alcohol dehydrogenase YPO1811 IPR036291 NAD(P)-binding domain superfamily YPO1811 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1812 IPR001851 ABC transporter, permease YPO1813 IPR030159 Autoinducer 2 ABC transporter, substrate-binding protein LsrB YPO1813 IPR025997 Periplasmic binding protein YPO1813 IPR028082 Periplasmic binding protein-like I YPO1814 IPR003593 AAA+ ATPase domain YPO1814 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1814 IPR015861 ABC transporter, ribose import, RbsA YPO1814 IPR017871 ABC transporter, conserved site YPO1814 IPR003439 ABC transporter-like YPO1815 IPR001851 ABC transporter, permease YPO1816 IPR002139 Ribokinase/fructokinase YPO1816 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YPO1816 IPR030877 Sulfofructose kinase YPO1816 IPR011611 Carbohydrate kinase PfkB YPO1816 IPR029056 Ribokinase-like YPO1819 IPR002010 Type III secretion system inner membrane R protein YPO1819 IPR006303 Flagellar biosynthesis protein FliR YPO1820 IPR005838 Type III secretion system inner membrane P protein YPO1820 IPR005837 Flagellar transport protein FliP YPO1820a IPR006305 Flagellar biosynthesis protein FliQ YPO1820a IPR002191 Bacterial export protein family 3 YPO1821 IPR022781 Flagellar biosynthesis protein, FliO YPO1822 IPR012826 Flagellar motor switch FliN YPO1822 IPR031576 Flagellar motor switch protein FliN, N-terminal YPO1822 IPR036429 SpoA-like superfamily YPO1822 IPR001543 Surface presentation of antigen (SpoA) YPO1822 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb YPO1823 IPR001543 Surface presentation of antigen (SpoA) YPO1823 IPR036429 SpoA-like superfamily YPO1823 IPR028976 CheC-like superfamily YPO1823 IPR001689 Flagellar motor switch protein FliM YPO1824 IPR005503 Flagellar basal body-associated protein FliL YPO1825 IPR001635 Flagellar hook-length control protein FliK YPO1825 IPR021136 Flagellar hook-length control protein-like, C-terminal YPO1825 IPR038610 FliK-like, C-terminal domain superfamily YPO1826 IPR012823 Flagellar export FliJ YPO1826 IPR018006 Flagellar FliJ, proteobacteria YPO1827 IPR032463 ATPase, type III secretion system, FliI YPO1827 IPR003593 AAA+ ATPase domain YPO1827 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1827 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain YPO1827 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site YPO1827 IPR005714 ATPase, type III secretion system, FliI/YscN YPO1827 IPR020005 Flagellar export ATPase FliI, clade 1 YPO1827 IPR040627 T3SS EscN ATPase, C-terminal YPO1828 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE YPO1828 IPR000563 Flagellar assembly protein FliH YPO1829 IPR000090 Flagellar motor switch protein FliG YPO1829 IPR023087 Flagellar motor switch protein FliG, C-terminal YPO1829 IPR011002 Flagellar motor switch protein FliG, alpha-helical YPO1829 IPR032779 Flagellar motor switch protein FliG, middle domain YPO1829 IPR028263 Flagellar motor switch protein FliG, N-terminal domain YPO1830 IPR013556 Flagellar M-ring C-terminal YPO1830 IPR000067 Flagellar M-ring protein FliF YPO1830 IPR006182 Secretory protein YscJ/FliF YPO1831 IPR001624 Flagellar hook-basal body complex protein FliE YPO1834 IPR011257 DNA glycosylase YPO1834 IPR003265 HhH-GPD domain YPO1837 IPR020449 Transcription regulator HTH, AraC- type YPO1837 IPR018062 HTH domain AraC-type, conserved site YPO1837 IPR018060 DNA binding HTH domain, AraC-type YPO1837 IPR009057 Homeobox-like domain superfamily YPO1839 IPR008622 Flagellar protein FliT YPO1840 IPR036584 Flagellar protein FliS superfamily YPO1840 IPR003713 Flagellar protein FliS YPO1841 IPR010809 Flagellar hook-associated protein 2, C-terminal YPO1841 IPR003481 Flagellar hook-associated protein 2, N-terminal YPO1841 IPR010810 Flagellin hook, IN motif YPO1841 IPR040026 Flagellar hook-associated protein 2 YPO1842 IPR014981 Flagellin D3 YPO1842 IPR001492 Flagellin YPO1842 IPR001029 Flagellin, D0/D1 domain YPO1843 IPR014284 RNA polymerase sigma-70 like domain YPO1843 IPR000943 RNA polymerase sigma-70 YPO1843 IPR007627 RNA polymerase sigma-70 region 2 YPO1843 IPR007624 RNA polymerase sigma-70 region 3 YPO1843 IPR007630 RNA polymerase sigma-70 region 4 YPO1843 IPR012845 RNA polymerase sigma factor, FliA/WhiG YPO1843 IPR013325 RNA polymerase sigma factor, region 2 YPO1843 IPR013324 RNA polymerase sigma factor, region 3/4-like YPO1843 IPR028617 RNA polymerase sigma factor FliA YPO1844 IPR022523 Flagellar regulator, FliZ YPO1844 IPR004107 Integrase, SAM-like, N-terminal YPO1845 IPR001926 Pyridoxal-phosphate dependent enzyme YPO1845 IPR023702 D-cysteine desulphhydrase, bacterial YPO1845 IPR005966 D-cysteine desulfhydrase YPO1845 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase YPO1845 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPO1846 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPO1846 IPR001320 Ionotropic glutamate receptor YPO1846 IPR018313 Solute-binding protein family 3, conserved site YPO1847 IPR035906 MetI-like superfamily YPO1847 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO1847 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain YPO1848 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1848 IPR003439 ABC transporter-like YPO1848 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type YPO1848 IPR003593 AAA+ ATPase domain YPO1848 IPR017871 ABC transporter, conserved site YPO1851 IPR024082 Proline dehydrogenase PutA, domain II YPO1851 IPR010985 Ribbon-helix-helix YPO1851 IPR024089 Proline dehydrogenase PutA, domain I/II YPO1851 IPR024090 Proline dehydrogenase PutA, domain I YPO1851 IPR002872 Proline dehydrogenase domain YPO1851 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain YPO1851 IPR025703 Bifunctional protein PutA YPO1851 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 YPO1851 IPR015590 Aldehyde dehydrogenase domain YPO1851 IPR016162 Aldehyde dehydrogenase, N-terminal YPO1851 IPR029510 Aldehyde dehydrogenase, glutamic acid active site YPO1851 IPR016160 Aldehyde dehydrogenase, cysteine active site YPO1851 IPR016163 Aldehyde dehydrogenase, C-terminal YPO1851 IPR016161 Aldehyde/histidinol dehydrogenase YPO1851 IPR029041 FAD-linked oxidoreductase-like YPO1851 IPR013321 Arc-type ribbon-helix-helix YPO1853 IPR018212 Sodium/solute symporter, conserved site YPO1853 IPR001734 Sodium/solute symporter YPO1853 IPR011851 Sodium/proline symporter YPO1853 IPR038377 Sodium/glucose symporter superfamily YPO1854 IPR004923 Iron permease FTR1/Fip1/EfeU YPO1855 IPR038352 Imelysin-like domain superfamily YPO1855 IPR028096 EfeO-type cupredoxin-like domain YPO1855 IPR034981 EfeO/Algp7, imelysin-like domain YPO1855 IPR018976 Imelysin-like domain YPO1855 IPR008972 Cupredoxin YPO1856 IPR011008 Dimeric alpha-beta barrel YPO1856 IPR006314 Dyp-type peroxidase YPO1856 IPR006313 Deferrochelatase/peroxidase EfeB YPO1856 IPR006311 Twin-arginine translocation pathway, signal sequence YPO1857 IPR005025 NADPH-dependent FMN reductase-like YPO1857 IPR008254 Flavodoxin/nitric oxide synthase YPO1857 IPR029039 Flavoprotein-like superfamily YPO1857 IPR010089 Flavoprotein WrbA-like YPO1857 IPR037513 NAD(P)H dehydrogenase (quinone), prokaryotic YPO1858 IPR006652 Kelch repeat type 1 YPO1858 IPR015915 Kelch-type beta propeller YPO1858 IPR019936 Mutatrotase, YjhT-like YPO1859 IPR004841 Amino acid permease/ SLC12A domain YPO1859 IPR004840 Amino acid permease, conserved site YPO1860 IPR027385 Outer membrane protein beta-barrel domain YPO1860 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YPO1860 IPR000758 Virulence-related outer membrane protein YPO1863 IPR009707 Membrane protein GlpM/YdgC YPO1865 IPR001789 Signal transduction response regulator, receiver domain YPO1865 IPR011006 CheY-like superfamily YPO1865 IPR016032 Signal transduction response regulator, C-terminal effector YPO1865 IPR000792 Transcription regulator LuxR, C-terminal YPO1866 IPR004791 UvrABC system, subunit C YPO1866 IPR038476 UvrC homology region 2 superfamily YPO1866 IPR036876 UVR domain superfamily YPO1866 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 YPO1866 IPR001943 UVR domain YPO1866 IPR000305 GIY-YIG endonuclease YPO1866 IPR035901 GIY-YIG endonuclease superfamily YPO1866 IPR010994 RuvA domain 2-like YPO1866 IPR001162 UvrC family homology region YPO1867 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YPO1867 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial YPO1867 IPR000462 CDP-alcohol phosphatidyltransferase YPO1890 IPR011663 UbiC transcription regulator-associated YPO1890 IPR036388 Winged helix-like DNA-binding domain superfamily YPO1890 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily YPO1890 IPR036390 Winged helix DNA-binding domain superfamily YPO1890 IPR000524 Transcription regulator HTH, GntR YPO1892 IPR004104 Oxidoreductase, C-terminal YPO1892 IPR023794 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase YPO1892 IPR036291 NAD(P)-binding domain superfamily YPO1892 IPR000683 Oxidoreductase, N-terminal YPO1894 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO1894 IPR035906 MetI-like superfamily YPO1895 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO1895 IPR035906 MetI-like superfamily YPO1900 IPR036397 Ribonuclease H superfamily YPO1900 IPR001584 Integrase, catalytic core YPO1900 IPR017894 HTH domain, IS21 transposase-type YPO1900 IPR012337 Ribonuclease H-like superfamily YPO1900 IPR006120 Resolvase, HTH domain YPO1901 IPR003593 AAA+ ATPase domain YPO1901 IPR001270 ClpA/B family YPO1901 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO1901 IPR002611 IstB-like ATP-binding protein YPO1901 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1906 IPR039426 Vitamin B12 transporter BtuB-like YPO1906 IPR010105 TonB-dependent siderophore receptor YPO1906 IPR012910 TonB-dependent receptor, plug domain YPO1906 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YPO1906 IPR000531 TonB-dependent receptor-like, beta-barrel YPO1907 IPR011963 2,3-dihydroxybenzoate-AMP ligase YPO1907 IPR000873 AMP-dependent synthetase/ligase YPO1907 IPR020845 AMP-binding, conserved site YPO1907 IPR025110 AMP-binding enzyme, C-terminal domain YPO1908 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS YPO1908 IPR020802 Polyketide synthase, thioesterase domain YPO1908 IPR029058 Alpha/Beta hydrolase fold YPO1908 IPR001031 Thioesterase YPO1910 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase YPO1910 IPR014043 Acyl transferase YPO1910 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPO1910 IPR001242 Condensation domain YPO1910 IPR018201 Beta-ketoacyl synthase, active site YPO1910 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily YPO1910 IPR032821 Ketoacyl-synthetase, C-terminal extension YPO1910 IPR016039 Thiolase-like YPO1910 IPR036736 ACP-like superfamily YPO1910 IPR001227 Acyl transferase domain superfamily YPO1910 IPR014031 Beta-ketoacyl synthase, C-terminal YPO1910 IPR014030 Beta-ketoacyl synthase, N-terminal YPO1910 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding YPO1910 IPR020806 Polyketide synthase, phosphopantetheine-binding domain YPO1910 IPR009081 Phosphopantetheine binding ACP domain YPO1911 IPR020845 AMP-binding, conserved site YPO1911 IPR000873 AMP-dependent synthetase/ligase YPO1911 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO1911 IPR006162 Phosphopantetheine attachment site YPO1911 IPR009081 Phosphopantetheine binding ACP domain YPO1911 IPR020806 Polyketide synthase, phosphopantetheine-binding domain YPO1911 IPR013217 Methyltransferase type 12 YPO1911 IPR001242 Condensation domain YPO1911 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily YPO1911 IPR042099 AMP-dependent synthetase-like superfamily YPO1911 IPR010071 Amino acid adenylation domain YPO1911 IPR036736 ACP-like superfamily YPO1913 IPR007037 Siderophore-interacting protein, C-terminal domain YPO1913 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPO1913 IPR017938 Riboflavin synthase-like beta-barrel YPO1913 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1913 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YPO1913 IPR017927 FAD-binding domain, ferredoxin reductase-type YPO1913 IPR013113 FAD-binding 9, siderophore-interacting YPO1913 IPR017871 ABC transporter, conserved site YPO1913 IPR003439 ABC transporter-like YPO1913 IPR011527 ABC transporter type 1, transmembrane domain YPO1913 IPR003593 AAA+ ATPase domain YPO1914 IPR011527 ABC transporter type 1, transmembrane domain YPO1914 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPO1914 IPR003439 ABC transporter-like YPO1914 IPR017871 ABC transporter, conserved site YPO1914 IPR003593 AAA+ ATPase domain YPO1914 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1914 IPR039421 Type I protein exporter YPO1914 IPR011917 ABC transporter, lipid A export, MsbA YPO1915 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 YPO1915 IPR011701 Major facilitator superfamily YPO1915 IPR036259 MFS transporter superfamily YPO1916 IPR005801 ADC synthase YPO1916 IPR019996 Salicylate synthase YPO1916 IPR015890 Chorismate-utilising enzyme, C-terminal YPO1916 IPR019999 Anthranilate synthase component I-like YPO1917 IPR013762 Integrase-like, catalytic domain superfamily YPO1917 IPR010998 Integrase/recombinase, N-terminal YPO1917 IPR025166 Integrase, DNA-binding domain YPO1917 IPR038488 Integrase, DNA-binding domain superfamily YPO1917 IPR002104 Integrase, catalytic domain YPO1917 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPO1918 IPR016147 Pili assembly chaperone, N-terminal YPO1918 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YPO1918 IPR008962 PapD-like superfamily YPO1918 IPR013783 Immunoglobulin-like fold YPO1918 IPR001829 Pili assembly chaperone, bacterial YPO1918 IPR016148 Pili assembly chaperone, C-terminal YPO1918 IPR018046 Pili assembly chaperone, conserved site YPO1920 IPR025949 PapC-like, C-terminal domain YPO1920 IPR042186 Outer membrane usher protein FimD, plug domain YPO1920 IPR000015 Outer membrane usher protein YPO1920 IPR025885 PapC, N-terminal domain YPO1920 IPR037224 PapC, N-terminal domain superfamily YPO1920 IPR018030 Fimbrial membrane usher, conserved site YPO1921 IPR013783 Immunoglobulin-like fold YPO1921 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YPO1921 IPR008962 PapD-like superfamily YPO1921 IPR018046 Pili assembly chaperone, conserved site YPO1921 IPR016147 Pili assembly chaperone, N-terminal YPO1921 IPR016148 Pili assembly chaperone, C-terminal YPO1921 IPR001829 Pili assembly chaperone, bacterial YPO1925 IPR016032 Signal transduction response regulator, C-terminal effector YPO1925 IPR011006 CheY-like superfamily YPO1925 IPR000792 Transcription regulator LuxR, C-terminal YPO1925 IPR001789 Signal transduction response regulator, receiver domain YPO1926 IPR037171 NagB/RpiA transferase-like YPO1926 IPR003702 Acetyl-CoA hydrolase/transferase YPO1926 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily YPO1926 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain YPO1927 IPR016790 Thiol ester hydratase, Rv0216, predicted YPO1927 IPR029069 HotDog domain superfamily YPO1927 IPR002539 MaoC-like dehydratase domain YPO1928 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily YPO1928 IPR005000 HpcH/HpaI aldolase/citrate lyase domain YPO1928 IPR011206 Citrate lyase beta subunit-like YPO1928 IPR040442 Pyruvate kinase-like domain superfamily YPO1929 IPR000847 Transcription regulator HTH, LysR YPO1929 IPR036388 Winged helix-like DNA-binding domain superfamily YPO1929 IPR036390 Winged helix DNA-binding domain superfamily YPO1929 IPR005119 LysR, substrate-binding YPO1929 IPR037410 HTH-type transcriptional regulator BudR, PBP2 domain YPO1932 IPR020846 Major facilitator superfamily domain YPO1932 IPR005829 Sugar transporter, conserved site YPO1932 IPR011701 Major facilitator superfamily YPO1932 IPR036259 MFS transporter superfamily YPO1933 IPR032466 Metal-dependent hydrolase YPO1933 IPR006680 Amidohydrolase-related YPO1935 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E YPO1935 IPR003667 NqrDE/RnfAE YPO1936 IPR004839 Aminotransferase, class I/classII YPO1936 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPO1936 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPO1936 IPR015424 Pyridoxal phosphate-dependent transferase YPO1937 IPR004841 Amino acid permease/ SLC12A domain YPO1937 IPR004840 Amino acid permease, conserved site YPO1938 IPR036390 Winged helix DNA-binding domain superfamily YPO1938 IPR036388 Winged helix-like DNA-binding domain superfamily YPO1938 IPR001034 DeoR-type HTH domain YPO1938 IPR018356 Transcription regulator, HTH DeoR-type, conserved site YPO1938 IPR037171 NagB/RpiA transferase-like YPO1938 IPR014036 DeoR C-terminal sensor domain YPO1939 IPR012338 Beta-lactamase/transpeptidase-like YPO1939 IPR015868 Glutaminase YPO1941 IPR004923 Iron permease FTR1/Fip1/EfeU YPO1942 IPR038482 Periplasmic metal-binding protein tp34-type superfamily YPO1942 IPR018470 Periplasmic metal-binding protein Tp34-type YPO1944 IPR003838 ABC transporter permease protein domain YPO1944 IPR017911 ABC transporter, macrolide export, ATP-binding domain YPO1944 IPR025857 MacB-like periplasmic core domain YPO1944 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1944 IPR017871 ABC transporter, conserved site YPO1944 IPR003593 AAA+ ATPase domain YPO1944 IPR003439 ABC transporter-like YPO1946 IPR017871 ABC transporter, conserved site YPO1946 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1946 IPR025857 MacB-like periplasmic core domain YPO1946 IPR003593 AAA+ ATPase domain YPO1946 IPR003838 ABC transporter permease protein domain YPO1946 IPR017911 ABC transporter, macrolide export, ATP-binding domain YPO1946 IPR003439 ABC transporter-like YPO1947 IPR036249 Thioredoxin-like superfamily YPO1947 IPR023555 Thiol-disulphide oxidoreductase ResA YPO1947 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant YPO1947 IPR013766 Thioredoxin domain YPO1949 IPR004537 Tellurite resistance methyltransferase, TehB YPO1949 IPR014431 Tellurite resistance methyltransferase, TehB type-2 YPO1949 IPR015392 Domain of unknown function DUF1971 YPO1949 IPR014710 RmlC-like jelly roll fold YPO1949 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO1949 IPR015985 Tellurite resistance methyltransferase TehB-like domain YPO1950 IPR000994 Peptidase M24 YPO1950 IPR036005 Creatinase/aminopeptidase-like YPO1950 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal YPO1951 IPR023870 Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA YPO1951 IPR019734 Tetratricopeptide repeat YPO1951 IPR013026 Tetratricopeptide repeat-containing domain YPO1951 IPR011990 Tetratricopeptide-like helical domain superfamily YPO1952 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal YPO1952 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YPO1952 IPR002509 NodB homology domain YPO1952 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB YPO1953 IPR001173 Glycosyltransferase 2-like YPO1953 IPR029044 Nucleotide-diphospho-sugar transferases YPO1953 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA YPO1954 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD YPO1957 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1957 IPR003714 PhoH-like protein YPO1958 IPR004837 Sodium/calcium exchanger membrane region YPO1958 IPR004713 Calcium/proton exchanger YPO1959 IPR042295 NarX-like, N-terminal domain superfamily YPO1959 IPR003594 Histidine kinase/HSP90-like ATPase YPO1959 IPR003660 HAMP domain YPO1959 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPO1959 IPR005467 Histidine kinase domain YPO1959 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain YPO1959 IPR029095 NarX-like, N-terminal YPO1959 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing YPO1960 IPR000524 Transcription regulator HTH, GntR YPO1960 IPR015424 Pyridoxal phosphate-dependent transferase YPO1960 IPR036388 Winged helix-like DNA-binding domain superfamily YPO1960 IPR036390 Winged helix DNA-binding domain superfamily YPO1960 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPO1960 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPO1960 IPR004839 Aminotransferase, class I/classII YPO1962 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria YPO1962 IPR026330 Succinylornithine transaminase YPO1962 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPO1962 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPO1962 IPR015424 Pyridoxal phosphate-dependent transferase YPO1962 IPR004636 Acetylornithine/Succinylornithine transaminase family YPO1962 IPR005814 Aminotransferase class-III YPO1963 IPR017650 Arginine N-succinyltransferase YPO1963 IPR007041 Arginine N-succinyltransferase AstA/AruG YPO1963 IPR016181 Acyl-CoA N-acyltransferase YPO1964 IPR017649 Succinylglutamate-semialdehyde dehydrogenase YPO1964 IPR015590 Aldehyde dehydrogenase domain YPO1964 IPR016161 Aldehyde/histidinol dehydrogenase YPO1964 IPR016163 Aldehyde dehydrogenase, C-terminal YPO1964 IPR016162 Aldehyde dehydrogenase, N-terminal YPO1964 IPR029510 Aldehyde dehydrogenase, glutamic acid active site YPO1964 IPR016160 Aldehyde dehydrogenase, cysteine active site YPO1965 IPR037031 Succinylarginine dihydrolase superfamily YPO1965 IPR007079 Succinylarginine dihydrolase YPO1966 IPR007036 Succinylglutamate desuccinylase/aspartoacylase YPO1966 IPR016681 Succinylglutamate desuccinylase YPO1968 IPR036397 Ribonuclease H superfamily YPO1968 IPR012337 Ribonuclease H-like superfamily YPO1968 IPR006120 Resolvase, HTH domain YPO1968 IPR001584 Integrase, catalytic core YPO1968 IPR017894 HTH domain, IS21 transposase-type YPO1969 IPR003593 AAA+ ATPase domain YPO1969 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1969 IPR002611 IstB-like ATP-binding protein YPO1969 IPR001270 ClpA/B family YPO1969 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO1972 IPR011059 Metal-dependent hydrolase, composite domain superfamily YPO1972 IPR006680 Amidohydrolase-related YPO1972 IPR032466 Metal-dependent hydrolase YPO1972 IPR005920 Imidazolonepropionase YPO1973 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily YPO1973 IPR011663 UbiC transcription regulator-associated YPO1973 IPR036388 Winged helix-like DNA-binding domain superfamily YPO1973 IPR036390 Winged helix DNA-binding domain superfamily YPO1973 IPR010248 Histidine utilization repressor YPO1973 IPR000524 Transcription regulator HTH, GntR YPO1974 IPR032466 Metal-dependent hydrolase YPO1974 IPR011059 Metal-dependent hydrolase, composite domain superfamily YPO1974 IPR023512 Deaminase MtaD/DadD YPO1974 IPR006680 Amidohydrolase-related YPO1975 IPR023482 Uncharacterised protein family Ves YPO1975 IPR010282 Uncharacterised protein family HutD/Ves YPO1975 IPR011051 RmlC-like cupin domain superfamily YPO1975 IPR014710 RmlC-like jelly roll fold YPO1979 IPR036291 NAD(P)-binding domain superfamily YPO1979 IPR001509 NAD-dependent epimerase/dehydratase YPO1988 IPR001207 Transposase, mutator type YPO1992 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO1992 IPR016584 Methyltransferase VrtF-like YPO1992 IPR013217 Methyltransferase type 12 YPO1993 IPR036291 NAD(P)-binding domain superfamily YPO1993 IPR002347 Short-chain dehydrogenase/reductase SDR YPO1993 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPO2000 IPR003660 HAMP domain YPO2000 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPO2000 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPO2000 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPO2000 IPR003594 Histidine kinase/HSP90-like ATPase YPO2000 IPR006290 Heavy metal sensor kinase YPO2000 IPR005467 Histidine kinase domain YPO2000 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPO2001 IPR001789 Signal transduction response regulator, receiver domain YPO2001 IPR036388 Winged helix-like DNA-binding domain superfamily YPO2001 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response YPO2001 IPR001867 OmpR/PhoB-type DNA-binding domain YPO2001 IPR011006 CheY-like superfamily YPO2001 IPR039420 Transcriptional regulatory protein WalR-like YPO2002 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain YPO2002 IPR029058 Alpha/Beta hydrolase fold YPO2010 IPR012676 TGS-like YPO2010 IPR023192 TGS-like domain superfamily YPO2010 IPR013029 YchF, C-terminal domain YPO2010 IPR004095 TGS YPO2010 IPR041706 YchF, N-terminal YPO2010 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2010 IPR006073 GTP binding domain YPO2010 IPR031167 OBG-type guanine nucleotide-binding (G) domain YPO2010 IPR012675 Beta-grasp domain superfamily YPO2010 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 YPO2011 IPR036416 Peptidyl-tRNA hydrolase superfamily YPO2011 IPR018171 Peptidyl-tRNA hydrolase, conserved site YPO2011 IPR001328 Peptidyl-tRNA hydrolase YPO2012 IPR019698 Protein of unknown function DUF2583 YPO2013 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type YPO2013 IPR005946 Ribose-phosphate pyrophosphokinase YPO2013 IPR029057 Phosphoribosyltransferase-like YPO2013 IPR000836 Phosphoribosyltransferase domain YPO2013 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site YPO2013 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain YPO2014 IPR013750 GHMP kinase, C-terminal domain YPO2014 IPR036554 GHMP kinase, C-terminal domain superfamily YPO2014 IPR006204 GHMP kinase N-terminal domain YPO2014 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase YPO2014 IPR020568 Ribosomal protein S5 domain 2-type fold YPO2014 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPO2015 IPR004565 Outer membrane lipoprotein LolB YPO2015 IPR029046 Lipoprotein localisation LolA/LolB/LppX YPO2016 IPR018214 Glutamyl-tRNA reductase, conserved site YPO2016 IPR036291 NAD(P)-binding domain superfamily YPO2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase YPO2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain YPO2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal YPO2016 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily YPO2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase YPO2016 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily YPO2017 IPR004373 Peptide chain release factor 1 YPO2017 IPR000352 Peptide chain release factor class I YPO2017 IPR005139 Peptide chain release factor YPO2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPO2018 IPR004556 Methyltransferase HemK-like YPO2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific YPO2018 IPR040758 Release factor glutamine methyltransferase, N-terminal domain YPO2018 IPR025714 Methyltransferase domain YPO2019 IPR007360 Invasion gene expression up-regulator, SirB YPO2020 IPR032698 Protein SirB1, N-terminal YPO2021 IPR006269 3-deoxy-8-phosphooctulonate synthase YPO2021 IPR006218 DAHP synthetase I/KDSA YPO2021 IPR013785 Aldolase-type TIM barrel YPO2023 IPR002686 Transposase IS200-like YPO2023 IPR036515 Transposase IS200-like superfamily YPO2025 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO2025 IPR002611 IstB-like ATP-binding protein YPO2025 IPR003593 AAA+ ATPase domain YPO2025 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2025 IPR001270 ClpA/B family YPO2026 IPR012337 Ribonuclease H-like superfamily YPO2026 IPR006120 Resolvase, HTH domain YPO2026 IPR036397 Ribonuclease H superfamily YPO2026 IPR017894 HTH domain, IS21 transposase-type YPO2026 IPR001584 Integrase, catalytic core YPO2028 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily YPO2028 IPR030395 Glycerophosphodiester phosphodiesterase domain YPO2030 IPR035906 MetI-like superfamily YPO2030 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO2031 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO2031 IPR035906 MetI-like superfamily YPO2033 IPR036515 Transposase IS200-like superfamily YPO2033 IPR002686 Transposase IS200-like YPO2035 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily YPO2035 IPR030395 Glycerophosphodiester phosphodiesterase domain YPO2036 IPR036388 Winged helix-like DNA-binding domain superfamily YPO2036 IPR036390 Winged helix DNA-binding domain superfamily YPO2036 IPR000600 ROK family YPO2036 IPR022687 DTXR-type HTH domain YPO2037 IPR004013 PHP domain YPO2037 IPR016195 Polymerase/histidinol phosphatase-like YPO2037 IPR003141 Polymerase/histidinol phosphatase, N-terminal YPO2037 IPR023710 Probable phosphatase YcdX YPO2038 IPR020945 DMSO/Nitrate reductase chaperone YPO2038 IPR026269 Tat proofreading chaperone DmsD-type YPO2038 IPR036411 TorD-like superfamily YPO2039 IPR010835 Protein of unknown function DUF1439 YPO2040 IPR011701 Major facilitator superfamily YPO2040 IPR022855 Multidrug resistance protein MdtH YPO2040 IPR020846 Major facilitator superfamily domain YPO2040 IPR036259 MFS transporter superfamily YPO2041 IPR016181 Acyl-CoA N-acyltransferase YPO2041 IPR000182 GNAT domain YPO2042 IPR036390 Winged helix DNA-binding domain superfamily YPO2042 IPR007432 Protein of unknown function DUF480 YPO2042 IPR036388 Winged helix-like DNA-binding domain superfamily YPO2043 IPR004268 Peptidoglycan biosynthesis protein MurJ YPO2044 IPR013686 Polypeptide-transport-associated, ShlB-type YPO2044 IPR034746 POTRA domain YPO2044 IPR035251 ShlB, POTRA domain YPO2044 IPR027282 Two partner secretion pathway transporter YPO2044 IPR005565 Haemolysin activator HlyB, C-terminal YPO2045 IPR012334 Pectin lyase fold YPO2045 IPR025157 Hemagglutinin repeat YPO2045 IPR011050 Pectin lyase fold/virulence factor YPO2045 IPR008638 Filamentous haemagglutinin, N-terminal YPO2046 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily YPO2046 IPR005148 Arginyl tRNA synthetase N-terminal domain YPO2046 IPR035684 Arginyl-tRNA synthetase, catalytic core domain YPO2046 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPO2046 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO2046 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding YPO2046 IPR001278 Arginine-tRNA ligase YPO2046 IPR008909 DALR anticodon binding YPO2047 IPR010393 Protein of unknown function DUF991 YPO2047 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase YPO2048 IPR036822 Copper homeostasis (CutC) domain superfamily YPO2048 IPR005627 Copper homeostasis protein CutC YPO2048 IPR023648 Copper homeostasis CutC domain YPO2049 IPR010017 tRNA U34 carboxymethyltransferase YPO2049 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO2049 IPR027555 tRNA (mo5U34)-methyltransferase-like YPO2050 IPR005271 Carboxy-S-adenosyl-L-methionine synthase YPO2050 IPR041698 Methyltransferase domain 25 YPO2050 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO2051 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily YPO2051 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein YPO2052 IPR036520 UPF0759 superfamily YPO2052 IPR002763 Protein of unknown function DUF72 YPO2053 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) YPO2053 IPR006195 Aminoacyl-tRNA synthetase, class II YPO2053 IPR012340 Nucleic acid-binding, OB-fold YPO2053 IPR029351 GAD domain YPO2053 IPR004524 Aspartate-tRNA ligase, type 1 YPO2053 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type YPO2053 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb YPO2053 IPR004115 GAD-like domain superfamily YPO2054 IPR003564 Dihydroneopterin triphosphate diphosphatase YPO2054 IPR015797 NUDIX hydrolase-like domain superfamily YPO2054 IPR000086 NUDIX hydrolase domain YPO2054 IPR020084 NUDIX hydrolase, conserved site YPO2055 IPR017856 Integrase-like, N-terminal YPO2055 IPR002876 Transcriptional regulator TACO1-like YPO2055 IPR026564 Transcriptional regulator TACO1-like, domain 3 YPO2055 IPR029072 YebC-like YPO2056 IPR002176 Crossover junction endodeoxyribonuclease RuvC YPO2056 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site YPO2056 IPR036397 Ribonuclease H superfamily YPO2056 IPR012337 Ribonuclease H-like superfamily YPO2057 IPR010994 RuvA domain 2-like YPO2057 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial YPO2057 IPR012340 Nucleic acid-binding, OB-fold YPO2057 IPR011114 Holliday junction DNA helicase RuvA, C-terminal YPO2057 IPR000085 Bacterial DNA recombination protein RuvA YPO2057 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 YPO2057 IPR036267 RuvA, C-terminal domain superfamily YPO2058 IPR041445 RuvB, AAA lid domain YPO2058 IPR008823 RuvB C-terminal winged helix domain YPO2058 IPR008824 RuvB-like P-loop domain YPO2058 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2058 IPR004605 DNA helicase, Holliday junction RuvB-type YPO2058 IPR003593 AAA+ ATPase domain YPO2058 IPR036388 Winged helix-like DNA-binding domain superfamily YPO2058 IPR036390 Winged helix DNA-binding domain superfamily YPO2059 IPR037294 ABC transporter, BtuC-like YPO2059 IPR001626 ABC transporter, TroCD-like YPO2060 IPR017882 Zinc import ATP-binding protein ZnuC YPO2060 IPR003439 ABC transporter-like YPO2060 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2060 IPR003593 AAA+ ATPase domain YPO2061 IPR035520 High-affinity zinc uptake system protein ZnuA YPO2061 IPR006127 Periplasmic solute binding protein, ZnuA-like YPO2062 IPR013731 Opacity-associated protein A, N-terminal YPO2062 IPR011055 Duplicated hybrid motif YPO2062 IPR018392 LysM domain YPO2062 IPR016047 Peptidase M23 YPO2063 IPR004960 Bacterial lipid A biosynthesis acyltransferase YPO2063 IPR011921 Lipid A biosynthesis myristoyltransferase YPO2064 IPR015793 Pyruvate kinase, barrel YPO2064 IPR015795 Pyruvate kinase, C-terminal YPO2064 IPR018209 Pyruvate kinase, active site YPO2064 IPR011037 Pyruvate kinase-like, insert domain superfamily YPO2064 IPR040442 Pyruvate kinase-like domain superfamily YPO2064 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily YPO2064 IPR001697 Pyruvate kinase YPO2064 IPR036918 Pyruvate kinase, C-terminal domain superfamily YPO2064 IPR015806 Pyruvate kinase, insert domain superfamily YPO2065 IPR009057 Homeobox-like domain superfamily YPO2065 IPR000281 Helix-turn-helix protein RpiR YPO2065 IPR001347 Sugar isomerase (SIS) YPO2065 IPR035472 RpiR-like, SIS domain YPO2065 IPR036388 Winged helix-like DNA-binding domain superfamily YPO2066 IPR019796 Glucose-6-phosphate dehydrogenase, active site YPO2066 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal YPO2066 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding YPO2066 IPR036291 NAD(P)-binding domain superfamily YPO2066 IPR001282 Glucose-6-phosphate dehydrogenase YPO2067 IPR000887 KDPG/KHG aldolase YPO2067 IPR031337 KDPG/KHG aldolase, active site 1 YPO2067 IPR031338 KDPG/KHG aldolase, active site 2 YPO2067 IPR013785 Aldolase-type TIM barrel YPO2068 IPR023740 Spermidine export protein MdtJ YPO2068 IPR000390 Small multidrug resistance protein family YPO2069 IPR023737 Spermidine export protein MdtI YPO2069 IPR000390 Small multidrug resistance protein family YPO2070 IPR035709 RutC family, YoaB-like YPO2070 IPR006175 YjgF/YER057c/UK114 family YPO2070 IPR035959 RutC-like superfamily YPO2070 IPR019897 RidA, conserved site YPO2071 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPO2071 IPR006935 Helicase/UvrB, N-terminal YPO2071 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2071 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type YPO2071 IPR006555 ATP-dependent helicase, C-terminal YPO2072 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB YPO2072 IPR000905 Gcp-like domain YPO2073 IPR004658 Outer membrane lipoprotein Slp YPO2074 IPR020845 AMP-binding, conserved site YPO2074 IPR000873 AMP-dependent synthetase/ligase YPO2074 IPR042099 AMP-dependent synthetase-like superfamily YPO2074 IPR025110 AMP-binding enzyme, C-terminal domain YPO2075 IPR036397 Ribonuclease H superfamily YPO2075 IPR012337 Ribonuclease H-like superfamily YPO2075 IPR006292 Ribonuclease D YPO2075 IPR002121 HRDC domain YPO2075 IPR010997 HRDC-like superfamily YPO2075 IPR002562 3'-5' exonuclease domain YPO2076 IPR036707 Cell division topological specificity factor MinE superfamily YPO2076 IPR005527 Cell division topological specificity factor MinE YPO2077 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain YPO2077 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2077 IPR025501 ATP binding protein MinD YPO2077 IPR010223 ATP binding protein MinD, bacterial-type YPO2078 IPR005526 Septum formation inhibitor MinC, C-terminal YPO2078 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily YPO2078 IPR007874 Septum formation inhibitor MinC, N-terminal YPO2078 IPR013033 Septum formation inhibitor MinC YPO2078 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal YPO2078 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily YPO2080 IPR038068 YcgL-like superfamily YPO2080 IPR027354 YcgL domain YPO2081 IPR011757 Lytic transglycosylase MltB YPO2081 IPR031304 Transglycosylase SLT domain 2 YPO2081 IPR023346 Lysozyme-like domain superfamily YPO2082 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily YPO2082 IPR011234 Fumarylacetoacetase-like, C-terminal YPO2083 IPR008228 Uncharacterised conserved protein UCP006173 YPO2083 IPR005358 Putative zinc- or iron-chelating domain containing protein YPO2085 IPR001584 Integrase, catalytic core YPO2085 IPR006120 Resolvase, HTH domain YPO2085 IPR036397 Ribonuclease H superfamily YPO2085 IPR012337 Ribonuclease H-like superfamily YPO2085 IPR017894 HTH domain, IS21 transposase-type YPO2086 IPR001270 ClpA/B family YPO2086 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO2086 IPR002611 IstB-like ATP-binding protein YPO2086 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2086 IPR003593 AAA+ ATPase domain YPO2089 IPR036619 NinB superfamily YPO2089 IPR008711 Recombinase NinB YPO2091 IPR010534 Bacteriophage 933W, GpQ YPO2104 IPR001207 Transposase, mutator type YPO2121 IPR002686 Transposase IS200-like YPO2121 IPR036515 Transposase IS200-like superfamily YPO2134 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly YPO2136 IPR001207 Transposase, mutator type YPO2138 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPO2138 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPO2138 IPR015424 Pyridoxal phosphate-dependent transferase YPO2138 IPR010240 Cysteine desulfurase IscS YPO2138 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site YPO2138 IPR000192 Aminotransferase class V domain YPO2138 IPR016454 Cysteine desulfurase YPO2141 IPR023380 DsbB-like superfamily YPO2141 IPR022920 Disulphide bond formation protein DsbB YPO2141 IPR003752 Disulphide bond formation protein DsbB/BdbC YPO2142 IPR004671 Na+/H+ antiporter NhaB YPO2144 IPR000524 Transcription regulator HTH, GntR YPO2144 IPR036388 Winged helix-like DNA-binding domain superfamily YPO2144 IPR008920 Transcription regulator FadR/GntR, C-terminal YPO2144 IPR028374 FadR, C-terminal domain YPO2144 IPR014178 Fatty acid response transcription factor FadR YPO2144 IPR036390 Winged helix DNA-binding domain superfamily YPO2145 IPR007390 Sporulation stage V, protein R YPO2147 IPR023080 D-amino acid dehydrogenase DadA YPO2147 IPR006076 FAD dependent oxidoreductase YPO2147 IPR036188 FAD/NAD(P)-binding domain superfamily YPO2148 IPR023697 Multidrug resistance protein MdtL YPO2148 IPR011701 Major facilitator superfamily YPO2148 IPR020846 Major facilitator superfamily domain YPO2148 IPR036259 MFS transporter superfamily YPO2149 IPR011051 RmlC-like cupin domain superfamily YPO2149 IPR012093 Pirin YPO2149 IPR014710 RmlC-like jelly roll fold YPO2149 IPR003829 Pirin, N-terminal domain YPO2149 IPR008778 Pirin, C-terminal domain YPO2150 IPR036390 Winged helix DNA-binding domain superfamily YPO2150 IPR036388 Winged helix-like DNA-binding domain superfamily YPO2150 IPR000847 Transcription regulator HTH, LysR YPO2150 IPR005119 LysR, substrate-binding YPO2152 IPR006698 Uncharacterised protein family UPF0229 YPO2153 IPR016230 Serine-protein kinase, PrkA YPO2153 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2153 IPR010650 PrkA C-terminal domain YPO2153 IPR013153 PrkA AAA domain YPO2155 IPR010583 MltA-interacting MipA YPO2156 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase YPO2156 IPR011013 Galactose mutarotase-like domain superfamily YPO2156 IPR014718 Glycoside hydrolase-type carbohydrate-binding YPO2156 IPR025532 Glucose-6-phosphate 1-epimerase YPO2157 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain YPO2157 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain YPO2157 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site YPO2157 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family YPO2157 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I YPO2157 IPR036291 NAD(P)-binding domain superfamily YPO2158 IPR028427 Peptide methionine sulfoxide reductase YPO2158 IPR011057 Mss4-like superfamily YPO2158 IPR002579 Peptide methionine sulphoxide reductase MrsB YPO2159 IPR009749 Protein of unknown function DUF1315 YPO2160 IPR000868 Isochorismatase-like YPO2160 IPR036380 Isochorismatase-like superfamily YPO2161 IPR006033 Type I L-asparaginase family YPO2161 IPR020827 Asparaginase/glutaminase, active site 1 YPO2161 IPR027475 Asparaginase/glutaminase, active site 2 YPO2161 IPR027473 L-asparaginase, C-terminal YPO2161 IPR040919 Asparaginase/glutaminase, C-terminal YPO2161 IPR036152 Asparaginase/glutaminase-like superfamily YPO2161 IPR041725 Type I (cytosolic) L-asparaginase YPO2161 IPR006034 Asparaginase/glutaminase-like YPO2161 IPR027474 L-asparaginase, N-terminal YPO2161 IPR037152 L-asparaginase, N-terminal domain superfamily YPO2162 IPR004634 Peptidase S49, protease IV YPO2162 IPR033854 Signal peptide peptidase A YPO2162 IPR002142 Peptidase S49 YPO2162 IPR004635 Peptidase S49, SppA YPO2162 IPR029045 ClpP/crotonase-like domain superfamily YPO2163 IPR000415 Nitroreductase-like YPO2163 IPR026021 Putative NAD(P)H nitroreductase YdjA-like YPO2163 IPR029479 Nitroreductase YPO2164 IPR023061 Selenophosphate synthetase, class I YPO2164 IPR036921 PurM-like, N-terminal domain superfamily YPO2164 IPR016188 PurM-like, N-terminal domain YPO2164 IPR004536 Selenophosphate synthetase YPO2164 IPR036676 PurM-like, C-terminal domain superfamily YPO2164 IPR010918 PurM-like, C-terminal domain YPO2165 IPR000380 DNA topoisomerase, type IA YPO2165 IPR003601 DNA topoisomerase, type IA, domain 2 YPO2165 IPR013497 DNA topoisomerase, type IA, central YPO2165 IPR023406 DNA topoisomerase, type IA, active site YPO2165 IPR005738 DNA topoisomerase III YPO2165 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 YPO2165 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 YPO2165 IPR003602 DNA topoisomerase, type IA, DNA-binding domain YPO2165 IPR034144 DNA topoisomerase 3-like, TOPRIM domain YPO2165 IPR023405 DNA topoisomerase, type IA, core domain YPO2165 IPR006171 TOPRIM domain YPO2165 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 YPO2166 IPR009971 Protein of unknown function DUF1496 YPO2167 IPR015797 NUDIX hydrolase-like domain superfamily YPO2167 IPR020084 NUDIX hydrolase, conserved site YPO2167 IPR000086 NUDIX hydrolase domain YPO2167 IPR020476 NUDIX hydrolase YPO2168 IPR037493 Exodeoxyribonuclease III-like YPO2168 IPR004808 AP endonuclease 1 YPO2168 IPR020847 AP endonuclease 1, binding site YPO2168 IPR020848 AP endonuclease 1, conserved site YPO2168 IPR036691 Endonuclease/exonuclease/phosphatase superfamily YPO2168 IPR005135 Endonuclease/exonuclease/phosphatase YPO2169 IPR005119 LysR, substrate-binding YPO2169 IPR000847 Transcription regulator HTH, LysR YPO2169 IPR036390 Winged helix DNA-binding domain superfamily YPO2169 IPR036388 Winged helix-like DNA-binding domain superfamily YPO2170 IPR001207 Transposase, mutator type YPO2171 IPR004810 Formyltetrahydrofolate deformylase YPO2171 IPR036477 Formyl transferase, N-terminal domain superfamily YPO2171 IPR002912 ACT domain YPO2171 IPR002376 Formyl transferase, N-terminal YPO2171 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain YPO2172 IPR023006 Uncharacterised protein family UPF0225 YPO2172 IPR004027 SEC-C motif YPO2172 IPR032710 NTF2-like domain superfamily YPO2173 IPR039420 Transcriptional regulatory protein WalR-like YPO2173 IPR001789 Signal transduction response regulator, receiver domain YPO2173 IPR011006 CheY-like superfamily YPO2173 IPR028616 Regulator of RpoS YPO2173 IPR036457 PPM-type phosphatase domain superfamily YPO2174 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal YPO2174 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type YPO2174 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation YPO2174 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily YPO2174 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal YPO2174 IPR017476 UDP-glucose/GDP-mannose dehydrogenase YPO2174 IPR036291 NAD(P)-binding domain superfamily YPO2174 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPO2175 IPR027454 Histone-like protein H-NS, N-terminal YPO2175 IPR001801 Histone-like protein H-NS YPO2175 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily YPO2175 IPR027444 Histone-like protein H-NS, C-terminal domain YPO2176 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2176 IPR001267 Thymidine kinase YPO2176 IPR020633 Thymidine kinase, conserved site YPO2177 IPR002611 IstB-like ATP-binding protein YPO2177 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO2177 IPR001270 ClpA/B family YPO2177 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2177 IPR003593 AAA+ ATPase domain YPO2178 IPR036397 Ribonuclease H superfamily YPO2178 IPR006120 Resolvase, HTH domain YPO2178 IPR012337 Ribonuclease H-like superfamily YPO2178 IPR001584 Integrase, catalytic core YPO2178 IPR017894 HTH domain, IS21 transposase-type YPO2180 IPR018211 Alcohol dehydrogenase, iron-type, conserved site YPO2180 IPR039697 Iron-type alcohol dehydrogenase-like YPO2180 IPR016163 Aldehyde dehydrogenase, C-terminal YPO2180 IPR016162 Aldehyde dehydrogenase, N-terminal YPO2180 IPR015590 Aldehyde dehydrogenase domain YPO2180 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase YPO2180 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA YPO2180 IPR016161 Aldehyde/histidinol dehydrogenase YPO2180 IPR034789 Bifunctional aldehyde-alcohol dehydrogenase, C-terminal domain YPO2181 IPR002771 Multiple antibiotic resistance (MarC)-related YPO2182 IPR000914 Solute-binding protein family 5 domain YPO2182 IPR023765 Solute-binding protein family 5, conserved site YPO2182 IPR039424 Solute-binding protein family 5 YPO2182 IPR030678 Peptide/nickel binding protein, MppA-type YPO2183 IPR035906 MetI-like superfamily YPO2183 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO2184 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO2184 IPR035906 MetI-like superfamily YPO2184 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YPO2185 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2185 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YPO2185 IPR017871 ABC transporter, conserved site YPO2185 IPR003439 ABC transporter-like YPO2185 IPR003593 AAA+ ATPase domain YPO2186 IPR003593 AAA+ ATPase domain YPO2186 IPR003439 ABC transporter-like YPO2186 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2186 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YPO2186 IPR017871 ABC transporter, conserved site YPO2187 IPR036763 Putative dsDNA mimic superfamily YPO2187 IPR007376 dsDNA mimic, putative YPO2188 IPR001736 Phospholipase D/Transphosphatidylase YPO2188 IPR025202 Phospholipase D-like domain YPO2188 IPR027379 Cardiolipin synthase N-terminal YPO2188 IPR022924 Cardiolipin synthase YPO2188 IPR030840 Cardiolipin synthase A YPO2190 IPR027385 Outer membrane protein beta-barrel domain YPO2190 IPR000758 Virulence-related outer membrane protein YPO2190 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YPO2192 IPR011008 Dimeric alpha-beta barrel YPO2192 IPR005545 YCII-related YPO2193 IPR003538 Gram-negative bacterial TonB protein YPO2193 IPR006260 TonB/TolA, C-terminal YPO2193 IPR037682 TonB, C-terminal YPO2194 IPR001207 Transposase, mutator type YPO2195 IPR006683 Thioesterase domain YPO2195 IPR029069 HotDog domain superfamily YPO2195 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase YPO2195 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain YPO2196 IPR006008 Intracellular septation protein A YPO2199 IPR009627 Uncharacterised protein family UPF0259 YPO2201 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YPO2201 IPR005618 Outer membrane protein, OmpW YPO2203 IPR002028 Tryptophan synthase, alpha chain YPO2203 IPR018204 Tryptophan synthase, alpha chain, active site YPO2203 IPR011060 Ribulose-phosphate binding barrel YPO2203 IPR013785 Aldolase-type TIM barrel YPO2204 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPO2204 IPR006653 Tryptophan synthase, beta chain, conserved site YPO2204 IPR006654 Tryptophan synthase, beta chain YPO2204 IPR023026 Tryptophan synthase beta chain/beta chain-like YPO2204 IPR001926 Pyridoxal-phosphate dependent enzyme YPO2205 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) YPO2205 IPR013785 Aldolase-type TIM barrel YPO2205 IPR011060 Ribulose-phosphate binding barrel YPO2205 IPR013798 Indole-3-glycerol phosphate synthase YPO2205 IPR001468 Indole-3-glycerol phosphate synthase, conserved site YPO2206 IPR000312 Glycosyl transferase, family 3 YPO2206 IPR005940 Anthranilate phosphoribosyl transferase YPO2206 IPR017459 Glycosyl transferase family 3, N-terminal domain YPO2206 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily YPO2206 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily YPO2207 IPR017926 Glutamine amidotransferase YPO2207 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain YPO2207 IPR029062 Class I glutamine amidotransferase-like YPO2208 IPR015890 Chorismate-utilising enzyme, C-terminal YPO2208 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial YPO2208 IPR006805 Anthranilate synthase component I, N-terminal YPO2208 IPR019999 Anthranilate synthase component I-like YPO2208 IPR005801 ADC synthase YPO2211 IPR004013 PHP domain YPO2211 IPR003141 Polymerase/histidinol phosphatase, N-terminal YPO2211 IPR016195 Polymerase/histidinol phosphatase-like YPO2212 IPR006070 YrdC-like domain YPO2212 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily YPO2213 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site YPO2213 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F YPO2213 IPR036986 RNA-binding S4 domain superfamily YPO2213 IPR002942 RNA-binding S4 domain YPO2213 IPR020103 Pseudouridine synthase, catalytic domain superfamily YPO2213 IPR006145 Pseudouridine synthase, RsuA/RluA YPO2214 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR YPO2214 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2215 IPR002347 Short-chain dehydrogenase/reductase SDR YPO2215 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPO2215 IPR036291 NAD(P)-binding domain superfamily YPO2216 IPR013703 Peptidase S49, N-terminal proteobacteria YPO2216 IPR002142 Peptidase S49 YPO2216 IPR029045 ClpP/crotonase-like domain superfamily YPO2217 IPR038191 YciN superfamily YPO2217 IPR019633 Protein of unknown function DUF2498 YPO2218 IPR023405 DNA topoisomerase, type IA, core domain YPO2218 IPR005733 DNA topoisomerase I, bacterial-type YPO2218 IPR006171 TOPRIM domain YPO2218 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 YPO2218 IPR013498 DNA topoisomerase, type IA, zn finger YPO2218 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 YPO2218 IPR034149 DNA topoisomerase 1, TOPRIM domain YPO2218 IPR003601 DNA topoisomerase, type IA, domain 2 YPO2218 IPR000380 DNA topoisomerase, type IA YPO2218 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type YPO2218 IPR023406 DNA topoisomerase, type IA, active site YPO2218 IPR013497 DNA topoisomerase, type IA, central YPO2218 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 YPO2218 IPR028612 DNA topoisomerase I, type IA YPO2218 IPR003602 DNA topoisomerase, type IA, DNA-binding domain YPO2219 IPR036390 Winged helix DNA-binding domain superfamily YPO2219 IPR036388 Winged helix-like DNA-binding domain superfamily YPO2219 IPR000847 Transcription regulator HTH, LysR YPO2219 IPR005119 LysR, substrate-binding YPO2221 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain YPO2221 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 YPO2221 IPR036008 Aconitase, iron-sulfur domain YPO2221 IPR018136 Aconitase family, 4Fe-4S cluster binding site YPO2221 IPR006249 Aconitase/Iron-responsive element-binding protein 2 YPO2221 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YPO2221 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain YPO2222 IPR032677 GTP cyclohydrolase II YPO2222 IPR000926 GTP cyclohydrolase II, RibA YPO2222 IPR036144 RibA-like superfamily YPO2223 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily YPO2223 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPO2224 IPR032906 Lipopolysaccharide assembly protein A YPO2224 IPR010445 Lipopolysaccharide assembly protein A domain YPO2225 IPR019734 Tetratricopeptide repeat YPO2225 IPR011990 Tetratricopeptide-like helical domain superfamily YPO2225 IPR013026 Tetratricopeptide repeat-containing domain YPO2225 IPR041166 LapB, rubredoxin metal binding domain YPO2225 IPR030865 Lipopolysaccharide assembly protein B YPO2227 IPR001754 Orotidine 5'-phosphate decarboxylase domain YPO2227 IPR011060 Ribulose-phosphate binding barrel YPO2227 IPR013785 Aldolase-type TIM barrel YPO2227 IPR018089 Orotidine 5'-phosphate decarboxylase, active site YPO2227 IPR014732 Orotidine 5'-phosphate decarboxylase YPO2228 IPR036877 SUI1 domain superfamily YPO2228 IPR001950 SUI1 domain YPO2228 IPR005872 Archaeal/bacterial translation initiation factor SUI1 YPO2229 IPR008816 Glycine zipper 2TM domain YPO2230 IPR001303 Class II aldolase/adducin N-terminal YPO2230 IPR033748 L-ribulose-5-phosphate 4-epimerase AraD YPO2230 IPR004661 L-ribulose-5-phosphate 4-epimerase YPO2230 IPR036409 Class II aldolase/adducin N-terminal domain superfamily YPO2232 IPR013785 Aldolase-type TIM barrel YPO2232 IPR023001 Fructose-6-phosphate aldolase YPO2232 IPR001585 Transaldolase/Fructose-6-phosphate aldolase YPO2232 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase YPO2232 IPR018225 Transaldolase, active site YPO2232 IPR033919 Transaldolase/Fructose-6-phosphate aldolase, archaeal/bacterial YPO2233 IPR007423 Selenoprotein, putative YPO2234 IPR003706 CstA, N-terminal domain YPO2234 IPR025299 CstA, C-terminal domain YPO2235 IPR004476 Ribonuclease II/ribonuclease R YPO2235 IPR022966 Ribonuclease II/R, conserved site YPO2235 IPR001900 Ribonuclease II/R YPO2235 IPR011129 Cold shock domain YPO2235 IPR003029 S1 domain YPO2235 IPR011804 Ribonuclease II YPO2235 IPR013223 Ribonuclease B, N-terminal OB domain YPO2235 IPR012340 Nucleic acid-binding, OB-fold YPO2235 IPR040476 RNase II/RNase R, cold shock domain YPO2237 IPR011701 Major facilitator superfamily YPO2237 IPR020846 Major facilitator superfamily domain YPO2237 IPR036259 MFS transporter superfamily YPO2238 IPR036291 NAD(P)-binding domain superfamily YPO2238 IPR001509 NAD-dependent epimerase/dehydratase YPO2239 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal YPO2239 IPR004036 Endonuclease III-like, conserved site-2 YPO2239 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif YPO2239 IPR004035 Endonuclease III, iron-sulphur binding site YPO2239 IPR003265 HhH-GPD domain YPO2239 IPR000445 Helix-hairpin-helix motif YPO2239 IPR005759 Endonuclease III YPO2239 IPR011257 DNA glycosylase YPO2240 IPR010968 Ion-translocating oxidoreductase complex subunit E YPO2240 IPR003667 NqrDE/RnfAE YPO2241 IPR007329 FMN-binding YPO2241 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG YPO2242 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD YPO2242 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D YPO2243 IPR010499 Bacterial transcription activator, effector binding YPO2243 IPR029442 GyrI-like small molecule binding domain YPO2243 IPR009057 Homeobox-like domain superfamily YPO2243 IPR018060 DNA binding HTH domain, AraC-type YPO2243 IPR011256 Regulatory factor, effector binding domain superfamily YPO2243 IPR020449 Transcription regulator HTH, AraC- type YPO2243 IPR018062 HTH domain AraC-type, conserved site YPO2244 IPR026902 RnfC Barrel sandwich hybrid domain YPO2244 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily YPO2244 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain YPO2244 IPR009051 Alpha-helical ferredoxin YPO2244 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO2244 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPO2244 IPR019554 Soluble ligand binding domain YPO2244 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC YPO2245 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO2245 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria YPO2245 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB YPO2245 IPR011005 Dihydropteroate synthase-like YPO2245 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPO2245 IPR007202 4Fe-4S domain YPO2246 IPR003667 NqrDE/RnfAE YPO2246 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA YPO2247 IPR019690 Protein of unknown function DUF2569 YPO2252 IPR039395 Peptidase C39-like A YPO2252 IPR005074 Peptidase C39, bacteriocin processing YPO2252 IPR039421 Type I protein exporter YPO2252 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2252 IPR003593 AAA+ ATPase domain YPO2252 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPO2252 IPR003439 ABC transporter-like YPO2252 IPR017871 ABC transporter, conserved site YPO2252 IPR011527 ABC transporter type 1, transmembrane domain YPO2252 IPR010132 ATPase, type I secretion system, HlyB YPO2253 IPR024664 L-arabinose isomerase, C-terminal YPO2253 IPR004216 L-fucose/L-arabinose isomerase, C-terminal YPO2253 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily YPO2253 IPR038583 L-arabinose isomerase, N-terminal domain superfamily YPO2253 IPR003762 L-arabinose isomerase YPO2254 IPR005929 Ribulokinase YPO2254 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPO2255 IPR028082 Periplasmic binding protein-like I YPO2255 IPR026266 L-arabinose-binding periplasmic protein YPO2255 IPR001761 Periplasmic binding protein/LacI sugar binding domain YPO2256 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2256 IPR003593 AAA+ ATPase domain YPO2256 IPR017917 ABC transporter, arabinose import, ATP-binding protein, AraG YPO2256 IPR017871 ABC transporter, conserved site YPO2256 IPR003439 ABC transporter-like YPO2257 IPR001851 ABC transporter, permease YPO2258 IPR018060 DNA binding HTH domain, AraC-type YPO2258 IPR009057 Homeobox-like domain superfamily YPO2258 IPR037923 Transcription regulator HTH-like YPO2258 IPR018062 HTH domain AraC-type, conserved site YPO2258 IPR020449 Transcription regulator HTH, AraC- type YPO2258 IPR003313 AraC-type arabinose-binding/dimerisation domain YPO2259 IPR004104 Oxidoreductase, C-terminal YPO2259 IPR036291 NAD(P)-binding domain superfamily YPO2259 IPR000683 Oxidoreductase, N-terminal YPO2260 IPR016833 Putative sodium bile acid cotransporter YPO2260 IPR038770 Sodium/solute symporter superfamily YPO2262 IPR010352 Protein of unknown function DUF945 YPO2263 IPR018050 Phosphomannose isomerase, type I, conserved site YPO2263 IPR011051 RmlC-like cupin domain superfamily YPO2263 IPR016305 Mannose-6-phosphate isomerase YPO2263 IPR001250 Mannose-6-phosphate isomerase, type I YPO2263 IPR014710 RmlC-like jelly roll fold YPO2263a IPR008948 L-Aspartase-like YPO2263a IPR005677 Fumarate hydratase, class II YPO2263a IPR024083 Fumarase/histidase, N-terminal YPO2263a IPR018951 Fumarase C, C-terminal YPO2263a IPR020557 Fumarate lyase, conserved site YPO2263a IPR022761 Fumarate lyase, N-terminal YPO2263a IPR000362 Fumarate lyase family YPO2265 IPR008865 DNA replication terminus site-binding protein YPO2265 IPR036384 Replication terminator Tus superfamily YPO2265 IPR036381 Replication terminator Tus, domain 1 YPO2266 IPR011701 Major facilitator superfamily YPO2266 IPR005829 Sugar transporter, conserved site YPO2266 IPR036259 MFS transporter superfamily YPO2266 IPR020846 Major facilitator superfamily domain YPO2268 IPR000600 ROK family YPO2268 IPR036388 Winged helix-like DNA-binding domain superfamily YPO2268 IPR036390 Winged helix DNA-binding domain superfamily YPO2269 IPR004472 Dethiobiotin synthase BioD YPO2269 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2270 IPR001807 Chloride channel, voltage gated YPO2270 IPR023790 Chloride channel, voltage-gated, ClcB YPO2270 IPR014743 Chloride channel, core YPO2279 IPR008900 Zona occludens toxin, N-terminal YPO2283 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPO2283 IPR028082 Periplasmic binding protein-like I YPO2283 IPR000843 LacI-type HTH domain YPO2286 IPR015168 SsuA/THI5-like YPO2286 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPO2286 IPR010067 Aliphatic sulfonates-binding protein YPO2287 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO2287 IPR035906 MetI-like superfamily YPO2288 IPR037109 AMP nucleoside phosphorylase, N-terminal domain superfamily YPO2288 IPR000845 Nucleoside phosphorylase domain YPO2288 IPR018953 AMP nucleoside phosphorylase, N-terminal YPO2288 IPR011271 AMP nucleosidase YPO2288 IPR035994 Nucleoside phosphorylase superfamily YPO2293 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain YPO2293 IPR000399 TPP-binding enzyme, conserved site YPO2293 IPR012846 Acetolactate synthase, large subunit, biosynthetic YPO2293 IPR012000 Thiamine pyrophosphate enzyme, central domain YPO2293 IPR029035 DHS-like NAD/FAD-binding domain superfamily YPO2293 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YPO2293 IPR039368 Acetolactate synthase large subunit, TPP binding domain YPO2293 IPR029061 Thiamin diphosphate-binding fold YPO2294 IPR004789 Acetolactate synthase, small subunit YPO2294 IPR002912 ACT domain YPO2294 IPR039557 AHAS, ACT domain YPO2295 IPR023214 HAD superfamily YPO2295 IPR041492 Haloacid dehalogenase-like hydrolase YPO2295 IPR023198 Phosphoglycolate phosphatase-like, domain 2 YPO2295 IPR036412 HAD-like superfamily YPO2295 IPR006439 HAD hydrolase, subfamily IA YPO2295 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB YPO2298 IPR001952 Alkaline phosphatase YPO2298 IPR017850 Alkaline-phosphatase-like, core domain superfamily YPO2298 IPR018299 Alkaline phosphatase, active site YPO2299 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain YPO2299 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain YPO2299 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding YPO2299 IPR023546 Methylated-DNA--protein-cysteine methyltransferase YPO2299 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site YPO2299 IPR036388 Winged helix-like DNA-binding domain superfamily YPO2299 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily YPO2300 IPR036390 Winged helix DNA-binding domain superfamily YPO2300 IPR000595 Cyclic nucleotide-binding domain YPO2300 IPR014710 RmlC-like jelly roll fold YPO2300 IPR012318 Crp-type HTH domain YPO2300 IPR018335 Transcription regulator HTH, Crp-type, conserved site YPO2300 IPR036388 Winged helix-like DNA-binding domain superfamily YPO2300 IPR018490 Cyclic nucleotide-binding-like YPO2301 IPR006016 UspA YPO2302 IPR034300 NADP transhydrogenase beta-like domain YPO2302 IPR029035 DHS-like NAD/FAD-binding domain superfamily YPO2302 IPR012136 NADP transhydrogenase, beta subunit YPO2303 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain YPO2303 IPR036291 NAD(P)-binding domain superfamily YPO2303 IPR026255 NAD(P) transhydrogenase, alpha subunit YPO2303 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal YPO2303 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 YPO2303 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 YPO2303 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal YPO2305 IPR036275 YdgH-like superfamily YPO2305 IPR025539 YdgH protein YPO2305 IPR010854 Domain of unknown function DUF1471 YPO2305 IPR025543 Dodecin-like YPO2306 IPR004754 Amino acid antiporter YPO2306 IPR002293 Amino acid/polyamine transporter I YPO2308 IPR036388 Winged helix-like DNA-binding domain superfamily YPO2308 IPR001789 Signal transduction response regulator, receiver domain YPO2308 IPR039420 Transcriptional regulatory protein WalR-like YPO2308 IPR016032 Signal transduction response regulator, C-terminal effector YPO2308 IPR011006 CheY-like superfamily YPO2308 IPR001867 OmpR/PhoB-type DNA-binding domain YPO2309 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPO2309 IPR003660 HAMP domain YPO2309 IPR005467 Histidine kinase domain YPO2309 IPR003594 Histidine kinase/HSP90-like ATPase YPO2309 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPO2309 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPO2309 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPO2310 IPR001333 Peptidase M32, carboxypeptidase Taq YPO2311 IPR002686 Transposase IS200-like YPO2311 IPR036515 Transposase IS200-like superfamily YPO2312 IPR041508 Toxin complex C-like repeat YPO2312 IPR025968 YwqJ-like deaminase YPO2312 IPR022385 Rhs repeat-associated core YPO2315 IPR023480 Uncharacterised protein family UPF0312/YceI YPO2315 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily YPO2315 IPR007372 Lipid/polyisoprenoid-binding, YceI-like YPO2316 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase YPO2316 IPR016174 Di-haem cytochrome, transmembrane YPO2319 IPR009003 Peptidase S1, PA clan YPO2319 IPR008256 Peptidase S1B YPO2319 IPR033116 Serine proteases, trypsin family, serine active site YPO2319 IPR018114 Serine proteases, trypsin family, histidine active site YPO2319 IPR001254 Serine proteases, trypsin domain YPO2322 IPR001650 Helicase, C-terminal YPO2322 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2322 IPR010222 RNA helicase HrpA YPO2322 IPR003593 AAA+ ATPase domain YPO2322 IPR011545 DEAD/DEAH box helicase domain YPO2322 IPR011709 Domain of unknown function DUF1605 YPO2322 IPR024590 RNA helicase HrpA, C-terminal YPO2322 IPR007502 Helicase-associated domain YPO2322 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPO2323 IPR023048 NADH-azoreductase, FMN-dependent YPO2323 IPR003680 Flavodoxin-like fold YPO2323 IPR029039 Flavoprotein-like superfamily YPO2324 IPR036388 Winged helix-like DNA-binding domain superfamily YPO2324 IPR007324 Sugar-binding domain, putative YPO2324 IPR037171 NagB/RpiA transferase-like YPO2324 IPR012318 Crp-type HTH domain YPO2325 IPR013131 Mannitol dehydrogenase, N-terminal YPO2325 IPR000669 Mannitol dehydrogenase YPO2325 IPR036291 NAD(P)-binding domain superfamily YPO2325 IPR013118 Mannitol dehydrogenase, C-terminal YPO2325 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPO2325 IPR013328 6-phosphogluconate dehydrogenase, domain 2 YPO2326 IPR008309 Uncharacterised conserved protein UCP025560 YPO2327 IPR025985 YnbE-like lipoprotein YPO2328 IPR021730 Dicarboxylate transport YPO2329 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPO2329 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YPO2329 IPR036291 NAD(P)-binding domain superfamily YPO2329 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain YPO2329 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YPO2330 IPR005184 Domain of unknown function DUF306, Meta/HslJ YPO2330 IPR038670 HslJ-like superfamily YPO2331 IPR005590 Protein of unknown function DUF333 YPO2332 IPR003416 MgtC/SapB/SrpB/YhiD family YPO2333 IPR000390 Small multidrug resistance protein family YPO2334 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO2334 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YPO2334 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II YPO2334 IPR037112 Pyruvate-flavodoxin oxidoreductase, EKR domain superfamily YPO2334 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II YPO2334 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain YPO2334 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain YPO2334 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal YPO2334 IPR011895 Pyruvate-flavodoxin oxidoreductase YPO2334 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain YPO2334 IPR029061 Thiamin diphosphate-binding fold YPO2334 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPO2335 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO2335 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase YPO2335 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal YPO2335 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type YPO2336 IPR013094 Alpha/beta hydrolase fold-3 YPO2336 IPR029058 Alpha/Beta hydrolase fold YPO2338 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB YPO2338 IPR023714 Zinc transport protein ZntB YPO2339 IPR000914 Solute-binding protein family 5 domain YPO2339 IPR030678 Peptide/nickel binding protein, MppA-type YPO2339 IPR023765 Solute-binding protein family 5, conserved site YPO2339 IPR039424 Solute-binding protein family 5 YPO2340 IPR000834 Peptidase M14, carboxypeptidase A YPO2341 IPR034603 Dipeptide epimerase YPO2341 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain YPO2341 IPR029065 Enolase C-terminal domain-like YPO2341 IPR029017 Enolase-like, N-terminal YPO2341 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site YPO2341 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal YPO2341 IPR036849 Enolase-like, C-terminal domain superfamily YPO2342 IPR036249 Thioredoxin-like superfamily YPO2342 IPR013740 Redoxin YPO2342 IPR013766 Thioredoxin domain YPO2342 IPR018219 Thiol peroxidase conserved site YPO2342 IPR002065 Thiol peroxidase Tpx YPO2343 IPR002686 Transposase IS200-like YPO2343 IPR036515 Transposase IS200-like superfamily YPO2344 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPO2344 IPR025944 Sigma-54 interaction domain, conserved site YPO2344 IPR002912 ACT domain YPO2344 IPR009057 Homeobox-like domain superfamily YPO2344 IPR003593 AAA+ ATPase domain YPO2344 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YPO2344 IPR002078 RNA polymerase sigma factor 54 interaction domain YPO2344 IPR030828 TyrR family, helix-turn-helix domain YPO2344 IPR035965 PAS domain superfamily YPO2344 IPR000014 PAS domain YPO2344 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2345 IPR024467 Domain of unknown function DUF2384 YPO2345 IPR011979 Conserved hypothetical protein CHP02293 YPO2346 IPR014914 RES domain YPO2347 IPR006507 Uncharacterised protein family UPF0283 YPO2347 IPR021147 Protein of unknown function DUF697 YPO2348 IPR007413 Protein of unknown function DUF463, YcjX-like protein YPO2349 IPR014320 Phage shock protein, PspC YPO2349 IPR007168 Phage shock protein, PspC, N-terminal YPO2350 IPR009554 Phage shock protein B YPO2351 IPR007157 PspA/IM30 YPO2351 IPR014319 Phage shock protein, PspA YPO2352 IPR014317 Transcription activator PspF YPO2352 IPR025944 Sigma-54 interaction domain, conserved site YPO2352 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPO2352 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2352 IPR009057 Homeobox-like domain superfamily YPO2352 IPR003593 AAA+ ATPase domain YPO2352 IPR002078 RNA polymerase sigma factor 54 interaction domain YPO2352 IPR002197 DNA binding HTH domain, Fis-type YPO2353 IPR036515 Transposase IS200-like superfamily YPO2353 IPR002686 Transposase IS200-like YPO2355 IPR000914 Solute-binding protein family 5 domain YPO2355 IPR030678 Peptide/nickel binding protein, MppA-type YPO2355 IPR039424 Solute-binding protein family 5 YPO2355 IPR023765 Solute-binding protein family 5, conserved site YPO2356 IPR035906 MetI-like superfamily YPO2356 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO2357 IPR035906 MetI-like superfamily YPO2357 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YPO2357 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO2358 IPR003593 AAA+ ATPase domain YPO2358 IPR003439 ABC transporter-like YPO2358 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2358 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YPO2359 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2359 IPR017871 ABC transporter, conserved site YPO2359 IPR003593 AAA+ ATPase domain YPO2359 IPR003439 ABC transporter-like YPO2360 IPR029032 AhpD-like YPO2361 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site YPO2361 IPR023517 Amino acid/peptide transporter family, dipeptide and tripeptide permease A YPO2361 IPR005279 Dipeptide/tripeptide permease YPO2361 IPR000109 Proton-dependent oligopeptide transporter family YPO2361 IPR036259 MFS transporter superfamily YPO2362 IPR006977 Yip1 domain YPO2363 IPR020317 Uncharacterised protein family YjbD YPO2364 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2364 IPR002611 IstB-like ATP-binding protein YPO2364 IPR003593 AAA+ ATPase domain YPO2364 IPR001270 ClpA/B family YPO2364 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO2365 IPR036397 Ribonuclease H superfamily YPO2365 IPR012337 Ribonuclease H-like superfamily YPO2365 IPR006120 Resolvase, HTH domain YPO2365 IPR017894 HTH domain, IS21 transposase-type YPO2365 IPR001584 Integrase, catalytic core YPO2367 IPR010987 Glutathione S-transferase, C-terminal-like YPO2367 IPR004045 Glutathione S-transferase, N-terminal YPO2367 IPR040079 Glutathione Transferase family YPO2367 IPR036249 Thioredoxin-like superfamily YPO2367 IPR036282 Glutathione S-transferase, C-terminal domain superfamily YPO2367 IPR004046 Glutathione S-transferase, C-terminal YPO2368 IPR023685 Pyridoxal kinase PdxY YPO2368 IPR004625 Pyridoxine kinase YPO2368 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase YPO2368 IPR029056 Ribokinase-like YPO2369 IPR002307 Tyrosine-tRNA ligase YPO2369 IPR002942 RNA-binding S4 domain YPO2369 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 YPO2369 IPR002305 Aminoacyl-tRNA synthetase, class Ic YPO2369 IPR036986 RNA-binding S4 domain superfamily YPO2369 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO2369 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPO2369 IPR024088 Tyrosine-tRNA ligase, bacterial-type YPO2370 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative YPO2370 IPR012349 FMN-binding split barrel YPO2370 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal YPO2370 IPR000659 Pyridoxamine 5'-phosphate oxidase YPO2370 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site YPO2371 IPR018660 C-type lysozyme inhibitor YPO2371 IPR036328 C-type lysozyme inhibitor superfamily YPO2372 IPR005338 Anhydro-N-acetylmuramic acid kinase YPO2373 IPR008816 Glycine zipper 2TM domain YPO2374 IPR036388 Winged helix-like DNA-binding domain superfamily YPO2374 IPR023187 Transcriptional regulator MarR-type, conserved site YPO2374 IPR036390 Winged helix DNA-binding domain superfamily YPO2374 IPR023071 Transcriptional regulator, SlyA YPO2374 IPR000835 MarR-type HTH domain YPO2375 IPR036812 NADP-dependent oxidoreductase domain superfamily YPO2375 IPR020471 Aldo/keto reductase YPO2375 IPR023210 NADP-dependent oxidoreductase domain YPO2376 IPR010710 Protein of unknown function DUF1289 YPO2377 IPR000917 Sulfatase, N-terminal YPO2377 IPR040423 Phosphoethanolamine transferase YPO2377 IPR012549 Phosphoethanolamine transferase, N-terminal YPO2377 IPR017850 Alkaline-phosphatase-like, core domain superfamily YPO2378 IPR011075 Tetracyclin repressor-like, C-terminal domain YPO2378 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily YPO2378 IPR001647 DNA-binding HTH domain, TetR-type YPO2378 IPR009057 Homeobox-like domain superfamily YPO2379 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal YPO2379 IPR013785 Aldolase-type TIM barrel YPO2380 IPR025968 YwqJ-like deaminase YPO2380 IPR022385 Rhs repeat-associated core YPO2380 IPR041508 Toxin complex C-like repeat YPO2381 IPR037523 Vicinal oxygen chelate (VOC) domain YPO2381 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase YPO2381 IPR004361 Glyoxalase I YPO2381 IPR018146 Glyoxalase I, conserved site YPO2381 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain YPO2382 IPR036397 Ribonuclease H superfamily YPO2382 IPR013520 Exonuclease, RNase T/DNA polymerase III YPO2382 IPR005987 Ribonuclease T YPO2382 IPR012337 Ribonuclease H-like superfamily YPO2383 IPR002109 Glutaredoxin YPO2383 IPR004480 Monothiol glutaredoxin-related YPO2383 IPR033658 Glutaredoxin, PICOT-like YPO2383 IPR014434 Monothiol glutaredoxin YPO2383 IPR036249 Thioredoxin-like superfamily YPO2385 IPR000064 Endopeptidase, NLPC/P60 domain YPO2385 IPR038765 Papain-like cysteine peptidase superfamily YPO2386 IPR019833 Manganese/iron superoxide dismutase, binding site YPO2386 IPR019832 Manganese/iron superoxide dismutase, C-terminal YPO2386 IPR019831 Manganese/iron superoxide dismutase, N-terminal YPO2386 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily YPO2386 IPR001189 Manganese/iron superoxide dismutase YPO2386 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily YPO2387 IPR023588 Transcription regulator HTH, PurR YPO2387 IPR028082 Periplasmic binding protein-like I YPO2387 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPO2387 IPR000843 LacI-type HTH domain YPO2388 IPR036388 Winged helix-like DNA-binding domain superfamily YPO2388 IPR000847 Transcription regulator HTH, LysR YPO2388 IPR036390 Winged helix DNA-binding domain superfamily YPO2388 IPR005119 LysR, substrate-binding YPO2389 IPR036259 MFS transporter superfamily YPO2389 IPR020846 Major facilitator superfamily domain YPO2389 IPR011701 Major facilitator superfamily YPO2389 IPR004812 Drug resistance transporter Bcr/CmlA subfamily YPO2390 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO2390 IPR003333 Mycolic acid cyclopropane synthase YPO2391 IPR001783 Lumazine-binding protein YPO2391 IPR017938 Riboflavin synthase-like beta-barrel YPO2391 IPR026017 Lumazine-binding domain YPO2391 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily YPO2392 IPR002528 Multi antimicrobial extrusion protein YPO2392 IPR022913 Multidrug resistance protein MdtK YPO2393 IPR015806 Pyruvate kinase, insert domain superfamily YPO2393 IPR015793 Pyruvate kinase, barrel YPO2393 IPR040442 Pyruvate kinase-like domain superfamily YPO2393 IPR011037 Pyruvate kinase-like, insert domain superfamily YPO2393 IPR018209 Pyruvate kinase, active site YPO2393 IPR036918 Pyruvate kinase, C-terminal domain superfamily YPO2393 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily YPO2393 IPR015795 Pyruvate kinase, C-terminal YPO2393 IPR001697 Pyruvate kinase YPO2394 IPR016367 Murein-lipoprotein YPO2394 IPR006817 Lipoprotein leucine-zipper YPO2395 IPR002686 Transposase IS200-like YPO2395 IPR036515 Transposase IS200-like superfamily YPO2396 IPR012337 Ribonuclease H-like superfamily YPO2396 IPR036397 Ribonuclease H superfamily YPO2396 IPR001584 Integrase, catalytic core YPO2396 IPR017894 HTH domain, IS21 transposase-type YPO2396 IPR006120 Resolvase, HTH domain YPO2397 IPR001270 ClpA/B family YPO2397 IPR003593 AAA+ ATPase domain YPO2397 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO2397 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2397 IPR002611 IstB-like ATP-binding protein YPO2398 IPR041597 L,D-transpeptidase C-terminal domain YPO2398 IPR018392 LysM domain YPO2398 IPR038063 L,D-transpeptidase catalytic domain-like YPO2398 IPR005490 L,D-transpeptidase catalytic domain YPO2399 IPR023939 Cysteine desulfuration protein SufE YPO2399 IPR003808 Fe-S metabolism associated domain, SufE-like YPO2400 IPR010970 Cysteine desulfurase, SufS YPO2400 IPR015424 Pyridoxal phosphate-dependent transferase YPO2400 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site YPO2400 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPO2400 IPR000192 Aminotransferase class V domain YPO2400 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPO2401 IPR011542 SUF system FeS cluster assembly, SufD YPO2401 IPR000825 SUF system FeS cluster assembly, SufBD YPO2401 IPR037284 SUF system FeS cluster assembly, SufBD superfamily YPO2402 IPR003439 ABC transporter-like YPO2402 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2402 IPR017871 ABC transporter, conserved site YPO2402 IPR003593 AAA+ ATPase domain YPO2402 IPR010230 FeS cluster assembly SUF system, ATPase SufC YPO2403 IPR000825 SUF system FeS cluster assembly, SufBD YPO2403 IPR037284 SUF system FeS cluster assembly, SufBD superfamily YPO2403 IPR010231 SUF system FeS cluster assembly, SufB YPO2404 IPR000361 FeS cluster biogenesis YPO2404 IPR016092 FeS cluster insertion protein YPO2404 IPR017870 FeS cluster insertion, C-terminal, conserved site YPO2404 IPR035903 HesB-like domain superfamily YPO2404 IPR011298 FeS assembly scaffold SufA YPO2406 IPR003736 Phenylacetic acid degradation-related domain YPO2406 IPR029069 HotDog domain superfamily YPO2406 IPR006683 Thioesterase domain YPO2406 IPR030863 1,4-dihydroxy-2-naphthoyl-CoA hydrolase, MenI YPO2407 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPO2407 IPR016164 FAD-linked oxidase-like, C-terminal YPO2407 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO2407 IPR004113 FAD-linked oxidase, C-terminal YPO2407 IPR036318 FAD-binding, type PCMH-like superfamily YPO2407 IPR006094 FAD linked oxidase, N-terminal YPO2407 IPR016166 FAD-binding domain, PCMH-type YPO2407 IPR009051 Alpha-helical ferredoxin YPO2408 IPR002549 Transmembrane protein TqsA-like YPO2409 IPR036637 Phosphohistidine domain superfamily YPO2409 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding YPO2409 IPR008279 PEP-utilising enzyme, mobile domain YPO2409 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily YPO2409 IPR013815 ATP-grasp fold, subdomain 1 YPO2409 IPR040442 Pyruvate kinase-like domain superfamily YPO2409 IPR000121 PEP-utilising enzyme, C-terminal YPO2409 IPR006319 Phosphoenolpyruvate synthase YPO2409 IPR018274 PEP-utilising enzyme, active site YPO2409 IPR023151 PEP-utilising enzyme, conserved site YPO2410 IPR026530 Phosphoenolpyruvate synthase regulatory protein YPO2410 IPR008917 Transcription factor, Skn-1-like, DNA-binding domain superfamily YPO2410 IPR005177 Bifunctional kinase-pyrophosphorylase YPO2411 IPR006218 DAHP synthetase I/KDSA YPO2411 IPR006219 DHAP synthase, class 1 YPO2411 IPR013785 Aldolase-type TIM barrel YPO2414 IPR023741 Lipoate-protein ligase A YPO2414 IPR019491 Lipoate protein ligase, C-terminal YPO2414 IPR004562 Lipoyltransferase/lipoate-protein ligase YPO2414 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain YPO2415 IPR000064 Endopeptidase, NLPC/P60 domain YPO2415 IPR038765 Papain-like cysteine peptidase superfamily YPO2416 IPR000390 Small multidrug resistance protein family YPO2416 IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF YPO2417 IPR000620 EamA domain YPO2417 IPR000390 Small multidrug resistance protein family YPO2417 IPR022883 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE YPO2418 IPR003342 Glycosyl transferase family 39/83 YPO2418 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase YPO2419 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YPO2419 IPR002509 NodB homology domain YPO2419 IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable YPO2420 IPR036477 Formyl transferase, N-terminal domain superfamily YPO2420 IPR011034 Formyl transferase-like, C-terminal domain superfamily YPO2420 IPR021168 Bifunctional polymyxin resistance protein, ArnA YPO2420 IPR001509 NAD-dependent epimerase/dehydratase YPO2420 IPR002376 Formyl transferase, N-terminal YPO2420 IPR005793 Formyl transferase, C-terminal YPO2420 IPR036291 NAD(P)-binding domain superfamily YPO2421 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase YPO2421 IPR001173 Glycosyltransferase 2-like YPO2421 IPR029044 Nucleotide-diphospho-sugar transferases YPO2422 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPO2422 IPR015424 Pyridoxal phosphate-dependent transferase YPO2422 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase YPO2422 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB YPO2422 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPO2423 IPR003593 AAA+ ATPase domain YPO2423 IPR003439 ABC transporter-like YPO2423 IPR023693 ABC transporter, vitamin B12, BtuD YPO2423 IPR017871 ABC transporter, conserved site YPO2423 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2424 IPR036249 Thioredoxin-like superfamily YPO2424 IPR029759 Glutathione peroxidase active site YPO2424 IPR029760 Glutathione peroxidase conserved site YPO2424 IPR000889 Glutathione peroxidase YPO2424 IPR033674 Thioredoxin/glutathione peroxidase BtuE YPO2425 IPR000522 ABC transporter, permease protein, BtuC-like YPO2425 IPR037294 ABC transporter, BtuC-like YPO2425 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC YPO2427 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily YPO2427 IPR005684 Integration host factor, alpha subunit YPO2427 IPR020816 Histone-like DNA-binding protein, conserved site YPO2427 IPR000119 Histone-like DNA-binding protein YPO2428 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily YPO2428 IPR012340 Nucleic acid-binding, OB-fold YPO2428 IPR005121 Ferrodoxin-fold anticodon-binding domain YPO2428 IPR009061 Putative DNA-binding domain superfamily YPO2428 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit YPO2428 IPR005146 B3/B4 tRNA-binding domain YPO2428 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain YPO2428 IPR002547 tRNA-binding domain YPO2428 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain YPO2428 IPR005147 tRNA synthetase, B5-domain YPO2428 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 YPO2429 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm YPO2429 IPR002319 Phenylalanyl-tRNA synthetase YPO2429 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial YPO2429 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit YPO2429 IPR006195 Aminoacyl-tRNA synthetase, class II YPO2429 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal YPO2430 IPR035566 Ribosomal protein L20, C-terminal YPO2430 IPR005813 Ribosomal protein L20 YPO2431 IPR018265 Ribosomal protein L35, conserved site YPO2431 IPR021137 Ribosomal protein L35 YPO2431 IPR001706 Ribosomal protein L35, non-mitochondrial YPO2431 IPR037229 Ribosomal protein L35 superfamily YPO2432 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily YPO2432 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily YPO2432 IPR019813 Translation initiation factor 3, conserved site YPO2432 IPR001288 Translation initiation factor 3 YPO2432 IPR019815 Translation initiation factor 3, C-terminal YPO2432 IPR019814 Translation initiation factor 3, N-terminal YPO2433 IPR002320 Threonine-tRNA ligase, class IIa YPO2433 IPR004154 Anticodon-binding YPO2433 IPR004095 TGS YPO2433 IPR006195 Aminoacyl-tRNA synthetase, class II YPO2433 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) YPO2433 IPR012947 Threonyl/alanyl tRNA synthetase, SAD YPO2433 IPR036621 Anticodon-binding domain superfamily YPO2433 IPR033728 Threonine-tRNA ligase catalytic core domain YPO2433 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily YPO2433 IPR012676 TGS-like YPO2433 IPR012675 Beta-grasp domain superfamily YPO2434 IPR025309 KTSC domain YPO2437 IPR002771 Multiple antibiotic resistance (MarC)-related YPO2438 IPR023946 Endo-type membrane-bound lytic murein transglycosylase A YPO2438 IPR023346 Lysozyme-like domain superfamily YPO2438 IPR000189 Prokaryotic transglycosylase, active site YPO2438 IPR008258 Transglycosylase SLT domain 1 YPO2439 IPR006128 Adhesion lipoprotein YPO2439 IPR006129 Adhesin B YPO2439 IPR006127 Periplasmic solute binding protein, ZnuA-like YPO2440 IPR003593 AAA+ ATPase domain YPO2440 IPR003439 ABC transporter-like YPO2440 IPR017871 ABC transporter, conserved site YPO2440 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2441 IPR037294 ABC transporter, BtuC-like YPO2441 IPR001626 ABC transporter, TroCD-like YPO2442 IPR037294 ABC transporter, BtuC-like YPO2442 IPR001626 ABC transporter, TroCD-like YPO2444 IPR016477 Fructosamine/Ketosamine-3-kinase YPO2444 IPR011009 Protein kinase-like domain superfamily YPO2445 IPR025229 YniB-like protein YPO2446 IPR023198 Phosphoglycolate phosphatase-like, domain 2 YPO2446 IPR041492 Haloacid dehalogenase-like hydrolase YPO2446 IPR023214 HAD superfamily YPO2446 IPR006439 HAD hydrolase, subfamily IA YPO2446 IPR036412 HAD-like superfamily YPO2447 IPR001207 Transposase, mutator type YPO2448 IPR006076 FAD dependent oxidoreductase YPO2448 IPR036188 FAD/NAD(P)-binding domain superfamily YPO2448 IPR023493 N-methyl-L-tryptophan oxidase MTOX YPO2449 IPR001789 Signal transduction response regulator, receiver domain YPO2449 IPR016032 Signal transduction response regulator, C-terminal effector YPO2449 IPR000792 Transcription regulator LuxR, C-terminal YPO2450 IPR002549 Transmembrane protein TqsA-like YPO2451 IPR040503 UPF0176, acylphosphatase-like domain YPO2451 IPR020936 Uncharacterised protein family UPF0176 YPO2451 IPR022111 Rhodanase, C-terminal YPO2451 IPR036873 Rhodanese-like domain superfamily YPO2451 IPR001763 Rhodanese-like domain YPO2456 IPR016181 Acyl-CoA N-acyltransferase YPO2456 IPR018311 Autoinducer synthesis, conserved site YPO2456 IPR001690 Autoinducer synthase YPO2457 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain YPO2457 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily YPO2457 IPR016032 Signal transduction response regulator, C-terminal effector YPO2457 IPR000792 Transcription regulator LuxR, C-terminal YPO2457 IPR036388 Winged helix-like DNA-binding domain superfamily YPO2458 IPR005119 LysR, substrate-binding YPO2458 IPR000847 Transcription regulator HTH, LysR YPO2458 IPR036390 Winged helix DNA-binding domain superfamily YPO2458 IPR036388 Winged helix-like DNA-binding domain superfamily YPO2459 IPR020846 Major facilitator superfamily domain YPO2459 IPR005828 Major facilitator, sugar transporter-like YPO2459 IPR036259 MFS transporter superfamily YPO2459 IPR005829 Sugar transporter, conserved site YPO2461 IPR036812 NADP-dependent oxidoreductase domain superfamily YPO2461 IPR023210 NADP-dependent oxidoreductase domain YPO2461 IPR020471 Aldo/keto reductase YPO2462 IPR013396 CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST YPO2463 IPR013399 CRISPR-associated protein Csy3 YPO2464 IPR013398 CRISPR-associated protein Csy2 YPO2465 IPR013397 CRISPR-associated protein Csy1 YPO2467 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2467 IPR006483 CRISPR-associated Cas3-type HD domain YPO2467 IPR013395 Helicase Cas3, CRISPR-associated, Yersinia-type YPO2467 IPR038257 CRISPR-associated Cas3-type HD domain superfamily YPO2468 IPR042206 CRISPR-associated endonuclease Cas1, C-terminal domain YPO2468 IPR002729 CRISPR-associated protein Cas1 YPO2468 IPR042211 CRISPR-associated endonuclease Cas1, N-terminal domain YPO2468 IPR019857 CRISPR-associated protein Cas1, YPEST subtype YPO2470 IPR011066 Mechanosensitive ion channel MscS, C-terminal YPO2470 IPR006685 Mechanosensitive ion channel MscS YPO2470 IPR030192 Miniconductance mechanosensitive channel YbdG YPO2470 IPR010920 LSM domain superfamily YPO2474 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily YPO2474 IPR028583 4-O-beta-D-mannosyl-D-glucose phosphorylase YPO2474 IPR007184 Mannoside phosphorylase YPO2475 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO2475 IPR035906 MetI-like superfamily YPO2476 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO2476 IPR035906 MetI-like superfamily YPO2478 IPR000843 LacI-type HTH domain YPO2478 IPR028082 Periplasmic binding protein-like I YPO2478 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPO2479 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III YPO2479 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II YPO2479 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III YPO2479 IPR005841 Alpha-D-phosphohexomutase superfamily YPO2479 IPR016066 Alpha-D-phosphohexomutase, conserved site YPO2479 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily YPO2479 IPR005843 Alpha-D-phosphohexomutase, C-terminal YPO2479 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I YPO2480 IPR015855 ABC transporter, maltose/maltodextrin import, MalK YPO2480 IPR003593 AAA+ ATPase domain YPO2480 IPR008995 Molybdate/tungstate binding, C-terminal YPO2480 IPR040582 MalK, OB fold domain YPO2480 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2480 IPR003439 ABC transporter-like YPO2480 IPR017871 ABC transporter, conserved site YPO2482 IPR008638 Filamentous haemagglutinin, N-terminal YPO2482 IPR008619 Filamentous haemagglutinin repeat YPO2482 IPR025157 Hemagglutinin repeat YPO2482 IPR028190 Novel toxin 21 YPO2482 IPR038181 Novel toxin 21 superfamily YPO2482 IPR011050 Pectin lyase fold/virulence factor YPO2482 IPR012334 Pectin lyase fold YPO2482 IPR006914 VENN motif-containing domain YPO2482 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPO2486 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPO2486 IPR008638 Filamentous haemagglutinin, N-terminal YPO2486 IPR025157 Hemagglutinin repeat YPO2486 IPR012334 Pectin lyase fold YPO2486 IPR011050 Pectin lyase fold/virulence factor YPO2486 IPR006914 VENN motif-containing domain YPO2486 IPR024973 ESPR domain YPO2490 IPR006914 VENN motif-containing domain YPO2490 IPR008638 Filamentous haemagglutinin, N-terminal YPO2490 IPR025157 Hemagglutinin repeat YPO2490 IPR012334 Pectin lyase fold YPO2490 IPR011050 Pectin lyase fold/virulence factor YPO2490 IPR024973 ESPR domain YPO2490 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPO2491 IPR013686 Polypeptide-transport-associated, ShlB-type YPO2491 IPR034746 POTRA domain YPO2491 IPR035251 ShlB, POTRA domain YPO2491 IPR027282 Two partner secretion pathway transporter YPO2491 IPR005565 Haemolysin activator HlyB, C-terminal YPO2492 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site YPO2492 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain YPO2492 IPR012675 Beta-grasp domain superfamily YPO2492 IPR036010 2Fe-2S ferredoxin-like superfamily YPO2492 IPR017938 Riboflavin synthase-like beta-barrel YPO2492 IPR000951 Phthalate dioxygenase reductase YPO2492 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPO2492 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YPO2492 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain YPO2492 IPR017927 FAD-binding domain, ferredoxin reductase-type YPO2492 IPR039003 Carnitine monooxygenase reductase subunit YPO2493 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily YPO2493 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit YPO2493 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain YPO2493 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site YPO2493 IPR017941 Rieske [2Fe-2S] iron-sulphur domain YPO2493 IPR039004 Carnitine monooxygenase oxygenase subunit YPO2494 IPR000060 BCCT transporter family YPO2494 IPR018093 BCCT transporter, conserved site YPO2496 IPR024084 Isopropylmalate dehydrogenase-like domain YPO2496 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site YPO2496 IPR011829 Tartrate dehydrogenase YPO2497 IPR036390 Winged helix DNA-binding domain superfamily YPO2497 IPR036388 Winged helix-like DNA-binding domain superfamily YPO2497 IPR000847 Transcription regulator HTH, LysR YPO2497 IPR005119 LysR, substrate-binding YPO2498 IPR028082 Periplasmic binding protein-like I YPO2498 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPO2498 IPR000843 LacI-type HTH domain YPO2499 IPR001851 ABC transporter, permease YPO2500 IPR015861 ABC transporter, ribose import, RbsA YPO2500 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2500 IPR003439 ABC transporter-like YPO2500 IPR003593 AAA+ ATPase domain YPO2500 IPR017871 ABC transporter, conserved site YPO2501 IPR025997 Periplasmic binding protein YPO2501 IPR028082 Periplasmic binding protein-like I YPO2502 IPR013154 Alcohol dehydrogenase, N-terminal YPO2502 IPR036291 NAD(P)-binding domain superfamily YPO2502 IPR011032 GroES-like superfamily YPO2502 IPR020843 Polyketide synthase, enoylreductase domain YPO2502 IPR013149 Alcohol dehydrogenase, C-terminal YPO2506 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YPO2506 IPR000758 Virulence-related outer membrane protein YPO2506 IPR027385 Outer membrane protein beta-barrel domain YPO2507 IPR000620 EamA domain YPO2509 IPR041698 Methyltransferase domain 25 YPO2509 IPR023506 Trans-aconitate 2-methyltransferase YPO2509 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal YPO2509 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO2510 IPR009078 Ferritin-like superfamily YPO2510 IPR008331 Ferritin/DPS protein domain YPO2510 IPR012347 Ferritin-like YPO2510 IPR023067 DNA protection during starvation protein, gammaproteobacteria YPO2510 IPR023188 DNA-binding protein Dps, conserved site YPO2510 IPR002177 DNA-binding protein Dps YPO2512 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPO2512 IPR018313 Solute-binding protein family 3, conserved site YPO2512 IPR001320 Ionotropic glutamate receptor YPO2513 IPR035906 MetI-like superfamily YPO2513 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO2513 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain YPO2514 IPR017871 ABC transporter, conserved site YPO2514 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type YPO2514 IPR003593 AAA+ ATPase domain YPO2514 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2514 IPR003439 ABC transporter-like YPO2515 IPR001610 PAC motif YPO2515 IPR013655 PAS fold-3 YPO2515 IPR000014 PAS domain YPO2515 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YPO2515 IPR004090 Chemotaxis methyl-accepting receptor YPO2515 IPR000700 PAS-associated, C-terminal YPO2515 IPR035965 PAS domain superfamily YPO2516 IPR006120 Resolvase, HTH domain YPO2516 IPR036397 Ribonuclease H superfamily YPO2516 IPR017894 HTH domain, IS21 transposase-type YPO2516 IPR012337 Ribonuclease H-like superfamily YPO2516 IPR001584 Integrase, catalytic core YPO2517 IPR002611 IstB-like ATP-binding protein YPO2517 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO2517 IPR001270 ClpA/B family YPO2517 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2517 IPR003593 AAA+ ATPase domain YPO2519 IPR010286 METTL16/RlmF family YPO2519 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO2519 IPR016909 Ribosomal RNA large subunit methyltransferase F YPO2521 IPR025543 Dodecin-like YPO2521 IPR036275 YdgH-like superfamily YPO2521 IPR010854 Domain of unknown function DUF1471 YPO2522 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily YPO2522 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily YPO2522 IPR017459 Glycosyl transferase family 3, N-terminal domain YPO2523 IPR025110 AMP-binding enzyme, C-terminal domain YPO2523 IPR020845 AMP-binding, conserved site YPO2523 IPR000873 AMP-dependent synthetase/ligase YPO2523 IPR042099 AMP-dependent synthetase-like superfamily YPO2523 IPR010192 2-succinylbenzoate--CoA ligase YPO2524 IPR036849 Enolase-like, C-terminal domain superfamily YPO2524 IPR029017 Enolase-like, N-terminal YPO2524 IPR029065 Enolase C-terminal domain-like YPO2524 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal YPO2524 IPR010196 o-Succinylbenzoate synthase, MenC type1 YPO2525 IPR014748 Enoyl-CoA hydratase, C-terminal YPO2525 IPR029045 ClpP/crotonase-like domain superfamily YPO2525 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB YPO2525 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site YPO2525 IPR001753 Enoyl-CoA hydratase/isomerase YPO2526 IPR029058 Alpha/Beta hydrolase fold YPO2526 IPR000073 Alpha/beta hydrolase fold-1 YPO2526 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase YPO2527 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain YPO2527 IPR029061 Thiamin diphosphate-binding fold YPO2527 IPR032264 Menaquinone biosynthesis protein MenD, middle domain YPO2527 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase YPO2527 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YPO2528 IPR034681 Isochorismate synthase MenF YPO2528 IPR004561 Isochorismate synthase YPO2528 IPR015890 Chorismate-utilising enzyme, C-terminal YPO2528 IPR005801 ADC synthase YPO2531 IPR010279 Inner membrane protein YqjD/ElaB YPO2533 IPR037237 IlvD/EDD, N-terminal domain YPO2533 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase YPO2533 IPR004786 6-phosphogluconate dehydratase YPO2533 IPR042096 Dihydroxy-acid dehydratase, C-terminal YPO2533 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site YPO2534 IPR038084 GlcG-like domain superfamily YPO2534 IPR010371 Uncharacterised protein family UPF0303 YPO2534 IPR005624 Haem-degrading YPO2535 IPR020846 Major facilitator superfamily domain YPO2535 IPR036259 MFS transporter superfamily YPO2535 IPR011701 Major facilitator superfamily YPO2536 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain YPO2536 IPR036291 NAD(P)-binding domain superfamily YPO2536 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPO2537 IPR028082 Periplasmic binding protein-like I YPO2537 IPR000843 LacI-type HTH domain YPO2537 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPO2538 IPR017853 Glycoside hydrolase superfamily YPO2538 IPR003790 Glycosyl hydrolase-like 10 YPO2538 IPR013785 Aldolase-type TIM barrel YPO2539 IPR036291 NAD(P)-binding domain superfamily YPO2539 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPO2539 IPR002347 Short-chain dehydrogenase/reductase SDR YPO2540 IPR006001 Carbohydrate kinase, thermoresistant glucokinase YPO2540 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2540 IPR031322 Shikimate kinase/gluconokinase YPO2541 IPR037012 YhcH/YjgK/YiaL superfamily YPO2541 IPR004375 YhcH/YjgK/YiaL family YPO2543 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit YPO2543 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 YPO2544 IPR003918 NADH:ubiquinone oxidoreductase YPO2544 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit YPO2544 IPR010227 NADH-quinone oxidoreductase, chain M/4 YPO2545 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal YPO2545 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup YPO2545 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit YPO2545 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 YPO2546 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like YPO2546 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K YPO2547 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 YPO2547 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ YPO2548 IPR010226 NADH-quinone oxidoreductase, chain I YPO2548 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPO2548 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO2549 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H YPO2549 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site YPO2550 IPR036010 2Fe-2S ferredoxin-like superfamily YPO2550 IPR010228 NADH:ubiquinone oxidoreductase, subunit G YPO2550 IPR009010 Aspartate decarboxylase-like domain superfamily YPO2550 IPR006657 Molybdopterin dinucleotide-binding domain YPO2550 IPR006656 Molybdopterin oxidoreductase YPO2550 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding YPO2550 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain YPO2550 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site YPO2550 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain YPO2551 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily YPO2551 IPR019554 Soluble ligand binding domain YPO2551 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily YPO2551 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain YPO2551 IPR011537 NADH ubiquinone oxidoreductase, F subunit YPO2551 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site YPO2551 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain YPO2552 IPR002023 NADH-quinone oxidoreductase subunit E-like YPO2552 IPR036249 Thioredoxin-like superfamily YPO2552 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal YPO2552 IPR042128 NuoE domain YPO2553 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site YPO2553 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H YPO2553 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily YPO2553 IPR029014 [NiFe]-hydrogenase, large subunit YPO2553 IPR010218 NADH dehydrogenase, subunit C YPO2553 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily YPO2553 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit YPO2553 IPR023062 NADH dehydrogenase, subunit CD YPO2553 IPR001135 NADH-quinone oxidoreductase, subunit D YPO2554 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit YPO2554 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit YPO2555 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid YPO2555 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 YPO2555 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily YPO2556 IPR036388 Winged helix-like DNA-binding domain superfamily YPO2556 IPR000847 Transcription regulator HTH, LysR YPO2556 IPR005119 LysR, substrate-binding YPO2556 IPR036390 Winged helix DNA-binding domain superfamily YPO2558 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPO2558 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPO2558 IPR015424 Pyridoxal phosphate-dependent transferase YPO2558 IPR004839 Aminotransferase, class I/classII YPO2559 IPR022971 5'-deoxynucleotidase YfbR YPO2559 IPR003607 HD/PDEase domain YPO2559 IPR039356 Metal-dependent nucleoside 5'-monophosphatase YPO2561 IPR006037 Regulator of K+ conductance, C-terminal YPO2561 IPR031312 Sodium/sulphate symporter, conserved site YPO2561 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily YPO2561 IPR004680 Citrate transporter-like domain YPO2562 IPR041492 Haloacid dehalogenase-like hydrolase YPO2562 IPR023214 HAD superfamily YPO2562 IPR023198 Phosphoglycolate phosphatase-like, domain 2 YPO2562 IPR036412 HAD-like superfamily YPO2562 IPR006439 HAD hydrolase, subfamily IA YPO2563 IPR023146 YfbU, alpha-helical bundle domain superfamily YPO2563 IPR023145 YfbU, helix-hairpin domain superfamily YPO2563 IPR005587 Uncharacterised protein family UPF0304, YfbU YPO2564 IPR007334 Uncharacterised protein family UPF0208 YPO2566 IPR004372 Acetate/propionate kinase YPO2566 IPR000890 Aliphatic acid kinase, short-chain YPO2566 IPR023865 Aliphatic acid kinase, short-chain, conserved site YPO2567 IPR042113 Phosphate acetyltransferase, domain 1 YPO2567 IPR002505 Phosphate acetyl/butaryl transferase YPO2567 IPR010766 DRTGG YPO2567 IPR016475 Phosphate acetyltransferase, bacteria YPO2567 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2567 IPR004614 Phosphate acetyltransferase YPO2567 IPR042112 Phosphate acetyltransferase, domain 2 YPO2567 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily YPO2568 IPR001761 Periplasmic binding protein/LacI sugar binding domain YPO2568 IPR028082 Periplasmic binding protein-like I YPO2568 IPR000843 LacI-type HTH domain YPO2568 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPO2569 IPR002178 PTS EIIA type-2 domain YPO2569 IPR016152 Phosphotransferase/anion transporter YPO2571 IPR001207 Transposase, mutator type YPO2572 IPR001264 Glycosyl transferase, family 51 YPO2572 IPR012338 Beta-lactamase/transpeptidase-like YPO2572 IPR011815 Penicillin-binding protein 1C YPO2572 IPR009647 Penicillin-binding, C-terminal YPO2572 IPR036950 Penicillin binding protein transglycosylase domain YPO2572 IPR023346 Lysozyme-like domain superfamily YPO2572 IPR001460 Penicillin-binding protein, transpeptidase YPO2573 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid YPO2573 IPR002890 Macroglobulin domain YPO2573 IPR001599 Alpha-2-macroglobulin YPO2573 IPR041246 Bacterial alpha-2-macroglobulin MG10 domain YPO2573 IPR041462 Bacterial Alpha-2-macroglobulin, MG6 domain YPO2573 IPR041203 Bacterial Alpha-2-macroglobulin, MG5 domain YPO2573 IPR011625 Alpha-2-macroglobulin, bait region domain YPO2573 IPR021868 Alpha-2-macroglobulin MG3 domain YPO2577 IPR016163 Aldehyde dehydrogenase, C-terminal YPO2577 IPR016160 Aldehyde dehydrogenase, cysteine active site YPO2577 IPR010061 Methylmalonate-semialdehyde dehydrogenase YPO2577 IPR015590 Aldehyde dehydrogenase domain YPO2577 IPR016162 Aldehyde dehydrogenase, N-terminal YPO2577 IPR016161 Aldehyde/histidinol dehydrogenase YPO2578 IPR029035 DHS-like NAD/FAD-binding domain superfamily YPO2578 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YPO2578 IPR012000 Thiamine pyrophosphate enzyme, central domain YPO2578 IPR029061 Thiamin diphosphate-binding fold YPO2578 IPR000399 TPP-binding enzyme, conserved site YPO2578 IPR023757 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase, Firmicutes YPO2578 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain YPO2578 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase YPO2581 IPR025997 Periplasmic binding protein YPO2581 IPR028082 Periplasmic binding protein-like I YPO2582 IPR015861 ABC transporter, ribose import, RbsA YPO2582 IPR003593 AAA+ ATPase domain YPO2582 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2582 IPR017871 ABC transporter, conserved site YPO2582 IPR003439 ABC transporter-like YPO2583 IPR001851 ABC transporter, permease YPO2584 IPR000683 Oxidoreductase, N-terminal YPO2584 IPR030827 Inositol 2-dehydrogenase YPO2584 IPR004104 Oxidoreductase, C-terminal YPO2584 IPR036291 NAD(P)-binding domain superfamily YPO2585 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YPO2585 IPR022841 5-dehydro-2-deoxygluconokinase, Firmicutes YPO2585 IPR030830 5-Dehydro-2-deoxygluconokinase YPO2585 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily YPO2585 IPR011611 Carbohydrate kinase PfkB YPO2585 IPR029056 Ribokinase-like YPO2586 IPR030823 IolE/MocC family YPO2586 IPR036237 Xylose isomerase-like superfamily YPO2586 IPR013022 Xylose isomerase-like, TIM barrel domain YPO2587 IPR024203 5-deoxy-glucuronate isomerase, IolB YPO2587 IPR021120 KduI/IolB isomerase YPO2587 IPR023770 5-deoxy-glucuronate isomerase, Bacilli YPO2587 IPR011051 RmlC-like cupin domain superfamily YPO2587 IPR014710 RmlC-like jelly roll fold YPO2588 IPR011527 ABC transporter type 1, transmembrane domain YPO2588 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2588 IPR017871 ABC transporter, conserved site YPO2588 IPR003439 ABC transporter-like YPO2588 IPR003593 AAA+ ATPase domain YPO2588 IPR039421 Type I protein exporter YPO2588 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPO2593 IPR016032 Signal transduction response regulator, C-terminal effector YPO2593 IPR000792 Transcription regulator LuxR, C-terminal YPO2595 IPR019844 Cold-shock (CSD) domain YPO2595 IPR002059 Cold-shock protein, DNA-binding YPO2595 IPR011129 Cold shock domain YPO2595 IPR012340 Nucleic acid-binding, OB-fold YPO2595 IPR012156 Cold shock, CspA YPO2596 IPR003691 Putative fluoride ion transporter CrcB YPO2597 IPR003369 Sec-independent protein translocase protein TatA/B/E YPO2597 IPR024905 Sec-independent protein translocase protein TatE YPO2597 IPR006312 Sec-independent protein translocase protein TatA/E YPO2598 IPR006638 Elp3/MiaB/NifB YPO2598 IPR031691 Lipoyl synthase, N-terminal YPO2598 IPR013785 Aldolase-type TIM barrel YPO2598 IPR003698 Lipoyl synthase YPO2598 IPR007197 Radical SAM YPO2599 IPR000544 Octanoyltransferase YPO2599 IPR020605 Octanoyltransferase, conserved site YPO2599 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain YPO2600 IPR007454 Uncharacterised protein family UPF0250 YPO2600 IPR027471 YbeD-like domain superfamily YPO2601 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily YPO2601 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A YPO2601 IPR012338 Beta-lactamase/transpeptidase-like YPO2601 IPR015956 Penicillin-binding protein, C-terminal domain superfamily YPO2601 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal YPO2601 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal YPO2602 IPR007730 Sporulation-like domain YPO2602 IPR012997 Rare lipoprotein A YPO2602 IPR036908 RlpA-like domain superfamily YPO2602 IPR009009 RlpA-like protein, double-psi beta-barrel domain YPO2602 IPR034718 Endolytic peptidoglycan transglycosylase RlpA YPO2602 IPR036680 Sporulation-like domain superfamily YPO2603 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB YPO2603 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site YPO2603 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA YPO2604 IPR012338 Beta-lactamase/transpeptidase-like YPO2604 IPR017790 Penicillin-binding protein 2 YPO2604 IPR005311 Penicillin-binding protein, dimerisation domain YPO2604 IPR001460 Penicillin-binding protein, transpeptidase YPO2604 IPR036138 Penicillin-binding protein, dimerisation domain superfamily YPO2605 IPR003742 RNA methyltransferase RlmH YPO2605 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPO2605 IPR029028 Alpha/beta knot methyltransferases YPO2606 IPR004394 Protein Iojap/ribosomal silencing factor RsfS YPO2607 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO2607 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase YPO2607 IPR004821 Cytidyltransferase-like domain YPO2608 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal YPO2608 IPR010372 DNA polymerase III delta, N-terminal YPO2608 IPR005790 DNA polymerase III, delta subunit YPO2608 IPR032780 DNA polymerase III subunit delta, C-terminal YPO2608 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2609 IPR007485 LPS-assembly lipoprotein LptE YPO2610 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO2610 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain YPO2610 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPO2610 IPR002300 Aminoacyl-tRNA synthetase, class Ia YPO2610 IPR002302 Leucine-tRNA ligase YPO2610 IPR025709 Leucyl-tRNA synthetase, editing domain YPO2610 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding YPO2610 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding YPO2611 IPR009912 Zinc-ribbon containing domain YPO2612 IPR017871 ABC transporter, conserved site YPO2612 IPR003593 AAA+ ATPase domain YPO2612 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type YPO2612 IPR003439 ABC transporter-like YPO2612 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2613 IPR030205 Glutamate/aspartate transport system permease protein GltK/AatM YPO2613 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO2613 IPR035906 MetI-like superfamily YPO2613 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain YPO2614 IPR035906 MetI-like superfamily YPO2614 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO2614 IPR030202 Glutamate/aspartate transport system permease protein GltJ/AatQ YPO2614 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain YPO2615 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPO2616 IPR003010 Carbon-nitrogen hydrolase YPO2616 IPR036526 Carbon-nitrogen hydrolase superfamily YPO2616 IPR004563 Apolipoprotein N-acyltransferase YPO2617 IPR000644 CBS domain YPO2617 IPR036318 FAD-binding, type PCMH-like superfamily YPO2617 IPR016169 FAD-binding, type PCMH, subdomain 2 YPO2617 IPR005170 Transporter-associated domain YPO2618 IPR023091 Metalloprotease catalytic domain superfamily, predicted YPO2618 IPR020549 Endoribonuclease YbeY, conserved site YPO2618 IPR002036 Endoribonuclease YbeY YPO2619 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2619 IPR003714 PhoH-like protein YPO2620 IPR002792 TRAM domain YPO2620 IPR023404 Radical SAM, alpha/beta horseshoe YPO2620 IPR038135 Methylthiotransferase, N-terminal domain superfamily YPO2620 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB YPO2620 IPR013848 Methylthiotransferase, N-terminal YPO2620 IPR020612 Methylthiotransferase, conserved site YPO2620 IPR005839 Methylthiotransferase YPO2620 IPR006638 Elp3/MiaB/NifB YPO2620 IPR007197 Radical SAM YPO2621 IPR036188 FAD/NAD(P)-binding domain superfamily YPO2621 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site YPO2621 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 YPO2621 IPR002938 FAD-binding domain YPO2623 IPR006426 Asparagine synthase, glutamine-hydrolyzing YPO2623 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO2623 IPR029055 Nucleophile aminohydrolases, N-terminal YPO2623 IPR017932 Glutamine amidotransferase type 2 domain YPO2623 IPR033738 Asparagine synthase, N-terminal domain YPO2623 IPR001962 Asparagine synthase YPO2624 IPR023214 HAD superfamily YPO2624 IPR006357 HAD-superfamily hydrolase, subfamily IIA YPO2624 IPR036412 HAD-like superfamily YPO2625 IPR000835 MarR-type HTH domain YPO2625 IPR000600 ROK family YPO2625 IPR036388 Winged helix-like DNA-binding domain superfamily YPO2625 IPR036390 Winged helix DNA-binding domain superfamily YPO2626 IPR006680 Amidohydrolase-related YPO2626 IPR003764 N-acetylglucosamine-6-phosphate deacetylase YPO2626 IPR032466 Metal-dependent hydrolase YPO2626 IPR011059 Metal-dependent hydrolase, composite domain superfamily YPO2627 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase YPO2627 IPR004547 Glucosamine-6-phosphate isomerase YPO2627 IPR018321 Glucosamine-6-phosphate isomerase, conserved site YPO2627 IPR037171 NagB/RpiA transferase-like YPO2628 IPR003352 Phosphotransferase system, EIIC YPO2628 IPR011055 Duplicated hybrid motif YPO2628 IPR036878 Glucose permease domain IIB YPO2628 IPR001996 Phosphotransferase system, IIB component, type 1 YPO2628 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site YPO2628 IPR013013 Phosphotransferase system, EIIC component, type 1 YPO2628 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component YPO2628 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 YPO2629 IPR002686 Transposase IS200-like YPO2629 IPR036515 Transposase IS200-like superfamily YPO2630 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO2630 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPO2630 IPR004514 Glutamine-tRNA synthetase YPO2630 IPR022861 Glutamine-tRNA ligase, bacterial YPO2630 IPR000924 Glutamyl/glutaminyl-tRNA synthetase YPO2630 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain YPO2630 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain YPO2630 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily YPO2630 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal YPO2630 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily YPO2631 IPR023614 Porin domain superfamily YPO2631 IPR005318 Outer membrane porin, bacterial YPO2634 IPR036390 Winged helix DNA-binding domain superfamily YPO2634 IPR002481 Ferric-uptake regulator YPO2634 IPR036388 Winged helix-like DNA-binding domain superfamily YPO2635 IPR010086 Flavodoxin, long chain YPO2635 IPR008254 Flavodoxin/nitric oxide synthase YPO2635 IPR029039 Flavoprotein-like superfamily YPO2635 IPR001226 Flavodoxin, conserved site YPO2637 IPR010985 Ribbon-helix-helix YPO2637 IPR002145 Ribbon-helix-helix protein, CopG YPO2638 IPR000073 Alpha/beta hydrolase fold-1 YPO2638 IPR029058 Alpha/Beta hydrolase fold YPO2640 IPR009057 Homeobox-like domain superfamily YPO2640 IPR002514 Transposase IS3/IS911family YPO2642 IPR002611 IstB-like ATP-binding protein YPO2642 IPR003593 AAA+ ATPase domain YPO2642 IPR001270 ClpA/B family YPO2642 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO2642 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2643 IPR017894 HTH domain, IS21 transposase-type YPO2643 IPR001584 Integrase, catalytic core YPO2643 IPR006120 Resolvase, HTH domain YPO2643 IPR012337 Ribonuclease H-like superfamily YPO2643 IPR036397 Ribonuclease H superfamily YPO2645 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain YPO2646 IPR035906 MetI-like superfamily YPO2646 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO2647 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2647 IPR005892 Glycine betaine transport ATP-binding subunit YPO2647 IPR000644 CBS domain YPO2647 IPR003439 ABC transporter-like YPO2647 IPR003593 AAA+ ATPase domain YPO2647 IPR017871 ABC transporter, conserved site YPO2648 IPR009078 Ferritin-like superfamily YPO2648 IPR000358 Ribonucleotide reductase small subunit family YPO2648 IPR033909 Ribonucleotide reductase small subunit YPO2648 IPR026494 Ribonucleoside reductase subunit beta, NrdF YPO2648 IPR012348 Ribonucleotide reductase-like YPO2648 IPR030475 Ribonucleotide reductase small subunit, acitve site YPO2649 IPR039718 Ribonucleoside-diphosphate reductase large subunit YPO2649 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal YPO2649 IPR013346 Ribonucleotide reductase, class I , alpha subunit YPO2649 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE YPO2649 IPR013554 Ribonucleotide reductase N-terminal YPO2649 IPR013509 Ribonucleotide reductase large subunit, N-terminal YPO2649 IPR000788 Ribonucleotide reductase large subunit, C-terminal YPO2650 IPR029039 Flavoprotein-like superfamily YPO2650 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial YPO2650 IPR004465 Ribonucleotide reductase Class Ib, NrdI YPO2652 IPR009435 Acid shock YPO2652 IPR023497 Acid shock protein YPO2653 IPR018994 Protein of unknown function DUF2002 YPO2654 IPR009587 Protein of unknown function DUF1198 YPO2656 IPR001207 Transposase, mutator type YPO2659 IPR012156 Cold shock, CspA YPO2659 IPR011129 Cold shock domain YPO2659 IPR012340 Nucleic acid-binding, OB-fold YPO2659 IPR002059 Cold-shock protein, DNA-binding YPO2659 IPR019844 Cold-shock (CSD) domain YPO2660 IPR011980 Nickel ABC transporter, substrate-binding protein NikA YPO2660 IPR000914 Solute-binding protein family 5 domain YPO2660 IPR023765 Solute-binding protein family 5, conserved site YPO2660 IPR039424 Solute-binding protein family 5 YPO2660 IPR030678 Peptide/nickel binding protein, MppA-type YPO2661 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO2661 IPR035906 MetI-like superfamily YPO2662 IPR035906 MetI-like superfamily YPO2662 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YPO2662 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO2663 IPR003593 AAA+ ATPase domain YPO2663 IPR003439 ABC transporter-like YPO2663 IPR017871 ABC transporter, conserved site YPO2663 IPR015863 ABC transporter, hemin import, HmuV YPO2663 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2664 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2664 IPR015858 ABC transporter, nickel import, NikE YPO2664 IPR003593 AAA+ ATPase domain YPO2664 IPR014137 Nickel import ATP-binding protein NikE YPO2664 IPR003439 ABC transporter-like YPO2664 IPR017871 ABC transporter, conserved site YPO2665 IPR036463 Urease, gamma subunit superfamily YPO2665 IPR012010 Urease, gamma subunit YPO2665 IPR002026 Urease, gamma/gamma-beta subunit YPO2666 IPR036461 Urease, beta subunit superfamily YPO2666 IPR002019 Urease, beta subunit YPO2667 IPR017950 Urease active site YPO2667 IPR011059 Metal-dependent hydrolase, composite domain superfamily YPO2667 IPR032466 Metal-dependent hydrolase YPO2667 IPR029754 Urease nickel binding site YPO2667 IPR011612 Urease alpha-subunit, N-terminal domain YPO2667 IPR005848 Urease, alpha subunit YPO2667 IPR017951 Urease alpha subunit, C-terminal YPO2667 IPR006680 Amidohydrolase-related YPO2668 IPR036118 UreE urease accessory, N-terminal domain superfamily YPO2668 IPR004029 UreE urease accessory, N-terminal YPO2668 IPR012406 Urease accessory protein UreE YPO2668 IPR007864 Urease accessory protein UreE, C-terminal domain YPO2669 IPR038277 UreF domain superfamily YPO2669 IPR002639 Urease accessory protein UreF YPO2670 IPR004400 Urease accessory protein UreG YPO2670 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2670 IPR003495 CobW/HypB/UreG, nucleotide-binding domain YPO2672 IPR029020 Ammonium/urea transporter YPO2672 IPR004937 Urea transporter YPO2673 IPR004688 Transition metal uptake transporter nickel/cobalt YPO2673 IPR011541 Nickel/cobalt transporter, high-affinity YPO2674 IPR010486 HNS-dependent expression A/B YPO2674 IPR038303 HNS-dependent expression A/B superfamily YPO2674 IPR028623 HNS-dependent expression B YPO2675 IPR036291 NAD(P)-binding domain superfamily YPO2675 IPR013099 Potassium channel domain YPO2675 IPR003148 Regulator of K+ conductance, N-terminal YPO2676 IPR003691 Putative fluoride ion transporter CrcB YPO2677 IPR003691 Putative fluoride ion transporter CrcB YPO2678 IPR036095 PTS system IIB component-like superfamily YPO2678 IPR013012 Phosphotransferase system, EIIB component, type 3 YPO2678 IPR003501 Phosphotransferase system, EIIB component, type 2/3 YPO2679 IPR003352 Phosphotransferase system, EIIC YPO2679 IPR004501 Phosphotransferase system, EIIC component, type 3 YPO2679 IPR004796 Phosphotransferase system, cellobiose-type IIC component YPO2680 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit YPO2680 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily YPO2681 IPR018062 HTH domain AraC-type, conserved site YPO2681 IPR013096 Cupin 2, conserved barrel YPO2681 IPR020449 Transcription regulator HTH, AraC- type YPO2681 IPR011051 RmlC-like cupin domain superfamily YPO2681 IPR009057 Homeobox-like domain superfamily YPO2681 IPR018060 DNA binding HTH domain, AraC-type YPO2681 IPR014710 RmlC-like jelly roll fold YPO2682 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YPO2682 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria YPO2682 IPR006879 Carbohydrate deacetylase YdjC-like YPO2685 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily YPO2685 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain YPO2685 IPR010985 Ribbon-helix-helix YPO2685 IPR005621 Negative modulator of initiation of replication SeqA YPO2685 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal YPO2685 IPR013321 Arc-type ribbon-helix-helix YPO2686 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II YPO2686 IPR016066 Alpha-D-phosphohexomutase, conserved site YPO2686 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I YPO2686 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III YPO2686 IPR005852 Phosphoglucomutase, alpha-D-glucose specific YPO2686 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III YPO2686 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily YPO2686 IPR005843 Alpha-D-phosphohexomutase, C-terminal YPO2688 IPR011006 CheY-like superfamily YPO2688 IPR001867 OmpR/PhoB-type DNA-binding domain YPO2688 IPR001789 Signal transduction response regulator, receiver domain YPO2688 IPR039420 Transcriptional regulatory protein WalR-like YPO2688 IPR036388 Winged helix-like DNA-binding domain superfamily YPO2689 IPR029016 GAF-like domain superfamily YPO2689 IPR003594 Histidine kinase/HSP90-like ATPase YPO2689 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPO2689 IPR005467 Histidine kinase domain YPO2689 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPO2689 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPO2689 IPR038318 KdpD, transmembrane domain superfamily YPO2689 IPR025201 Sensor protein KdpD, transmembrane domain YPO2689 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPO2689 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal YPO2689 IPR003018 GAF domain YPO2690 IPR003820 Potassium-transporting ATPase C chain YPO2691 IPR001757 P-type ATPase YPO2691 IPR006391 P-type ATPase, B chain, subfamily IA YPO2691 IPR036412 HAD-like superfamily YPO2691 IPR008250 P-type ATPase, A domain superfamily YPO2691 IPR023298 P-type ATPase, transmembrane domain superfamily YPO2691 IPR018303 P-type ATPase, phosphorylation site YPO2691 IPR023299 P-type ATPase, cytoplasmic domain N YPO2692 IPR004623 Potassium-transporting ATPase A chain YPO2693 IPR019663 Uncharacterised protein YbfA YPO2694 IPR013560 Domain of unknown function DUF1722 YPO2695 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain YPO2695 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO2695 IPR002081 Cryptochrome/DNA photolyase class 1 YPO2695 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily YPO2695 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily YPO2695 IPR006050 DNA photolyase, N-terminal YPO2695 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal YPO2696 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YPO2696 IPR000396 Cyclic-AMP phosphodiesterase, class-II YPO2696 IPR024225 Cyclic-AMP phosphodiesterase class-II, conserved site YPO2697 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 YPO2697 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily YPO2699 IPR003778 Carboxyltransferase domain, subdomain A and B YPO2699 IPR029000 Cyclophilin-like domain superfamily YPO2700 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YPO2700 IPR005501 LamB/YcsF/PxpA-like YPO2703 IPR033694 Pyroglutamyl peptidase I, Cys active site YPO2703 IPR033693 Pyroglutamyl peptidase I, Glu active site YPO2703 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily YPO2703 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like YPO2703 IPR029762 Pyroglutamyl peptidase I, bacterial-type YPO2703 IPR000816 Peptidase C15, pyroglutamyl peptidase I YPO2704 IPR036895 Uracil-DNA glycosylase-like domain superfamily YPO2704 IPR018085 Uracil-DNA glycosylase, active site YPO2704 IPR005122 Uracil-DNA glycosylase-like YPO2704 IPR002043 Uracil-DNA glycosylase family 1 YPO2705 IPR001150 Glycine radical domain YPO2705 IPR019777 Formate C-acetyltransferase glycine radical, conserved site YPO2705 IPR011140 Autonomous glycyl radical cofactor GrcA YPO2706 IPR029058 Alpha/Beta hydrolase fold YPO2707 IPR002110 Ankyrin repeat YPO2707 IPR020683 Ankyrin repeat-containing domain YPO2707 IPR036770 Ankyrin repeat-containing domain superfamily YPO2708 IPR011545 DEAD/DEAH box helicase domain YPO2708 IPR028621 ATP-dependent RNA helicase SrmB YPO2708 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPO2708 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2708 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site YPO2708 IPR014014 RNA helicase, DEAD-box type, Q motif YPO2708 IPR001650 Helicase, C-terminal YPO2709 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPO2709 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase YPO2709 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO2709 IPR007848 Methyltransferase small domain YPO2710 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily YPO2710 IPR036188 FAD/NAD(P)-binding domain superfamily YPO2710 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal YPO2710 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily YPO2710 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain YPO2710 IPR005288 L-aspartate oxidase YPO2711 IPR036388 Winged helix-like DNA-binding domain superfamily YPO2711 IPR039425 RNA polymerase sigma-70 like YPO2711 IPR014284 RNA polymerase sigma-70 like domain YPO2711 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site YPO2711 IPR007627 RNA polymerase sigma-70 region 2 YPO2711 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 YPO2711 IPR014286 RNA polymerase sigma-70 RpoE type YPO2711 IPR013325 RNA polymerase sigma factor, region 2 YPO2711 IPR013324 RNA polymerase sigma factor, region 3/4-like YPO2712 IPR005573 Anti sigma-E protein RseA, C-terminal YPO2712 IPR005572 Anti sigma-E protein RseA, N-terminal YPO2712 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily YPO2712 IPR026279 Sigma-E factor negative regulatory protein RseA YPO2713 IPR033434 MucB/RseB, N-terminal YPO2713 IPR038484 MucB/RseB, C-terminal domain superfamily YPO2713 IPR005588 MucB/RseB YPO2713 IPR033436 MucB/RseB, C-terminal YPO2714 IPR007359 Positive regulator of sigma(E), RseC/MucC YPO2714 IPR026268 Protein RseC YPO2716 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2716 IPR000640 Elongation factor EFG, domain V-like YPO2716 IPR000795 Transcription factor, GTP-binding domain YPO2716 IPR005225 Small GTP-binding protein domain YPO2716 IPR006297 Elongation factor 4 YPO2716 IPR035654 Elongation factor 4, domain IV YPO2716 IPR035647 EF-G domain III/V-like YPO2716 IPR004161 Translation elongation factor EFTu-like, domain 2 YPO2716 IPR031157 Tr-type G domain, conserved site YPO2716 IPR013842 GTP-binding protein LepA, C-terminal YPO2716 IPR038363 LepA, C-terminal domain superfamily YPO2717 IPR019758 Peptidase S26A, signal peptidase I, conserved site YPO2717 IPR000223 Peptidase S26A, signal peptidase I YPO2717 IPR019756 Peptidase S26A, signal peptidase I, serine active site YPO2717 IPR036286 LexA/Signal peptidase-like superfamily YPO2717 IPR019757 Peptidase S26A, signal peptidase I, lysine active site YPO2717 IPR019533 Peptidase S26 YPO2718 IPR036389 Ribonuclease III, endonuclease domain superfamily YPO2718 IPR000999 Ribonuclease III domain YPO2718 IPR014720 Double-stranded RNA-binding domain YPO2718 IPR011907 Ribonuclease III YPO2719 IPR005662 GTP-binding protein Era YPO2719 IPR006073 GTP binding domain YPO2719 IPR015946 K homology domain-like, alpha/beta YPO2719 IPR009019 K homology domain superfamily, prokaryotic type YPO2719 IPR030388 Era-type guanine nucleotide-binding (G) domain YPO2719 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2719 IPR005225 Small GTP-binding protein domain YPO2719 IPR004044 K Homology domain, type 2 YPO2720 IPR022572 DNA replication/recombination mediator RecO, N-terminal YPO2720 IPR012340 Nucleic acid-binding, OB-fold YPO2720 IPR037278 ARFGAP/RecO-like zinc finger YPO2720 IPR003717 Recombination protein O, RecO YPO2721 IPR017894 HTH domain, IS21 transposase-type YPO2721 IPR036397 Ribonuclease H superfamily YPO2721 IPR006120 Resolvase, HTH domain YPO2721 IPR012337 Ribonuclease H-like superfamily YPO2721 IPR001584 Integrase, catalytic core YPO2722 IPR003593 AAA+ ATPase domain YPO2722 IPR001270 ClpA/B family YPO2722 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO2722 IPR002611 IstB-like ATP-binding protein YPO2722 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2724 IPR017731 Type VI secretion system, IcmF YPO2724 IPR010623 Type VI secretion system IcmF, C-terminal YPO2724 IPR025743 IcmF-related, N-terminal domain YPO2724 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2724 IPR009612 IcmF-related YPO2725 IPR010609 Gp5, C-terminal YPO2725 IPR006531 Gp5 N-terminal YPO2725 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPO2725 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPO2725 IPR037026 Vgr protein, OB-fold domain superfamily YPO2727 IPR011990 Tetratricopeptide-like helical domain superfamily YPO2727 IPR009211 Predicted virulence protein, SciE type YPO2730 IPR004624 PhnA protein YPO2730 IPR013988 PhnA protein, C-terminal YPO2730 IPR013987 PhnA protein, N-terminal YPO2732 IPR023353 LemA-like domain superfamily YPO2732 IPR007156 LemA YPO2734 IPR003439 ABC transporter-like YPO2734 IPR003593 AAA+ ATPase domain YPO2734 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2734 IPR017871 ABC transporter, conserved site YPO2734 IPR005895 ABC transporter, haem export, CcmA YPO2735 IPR003544 Cytochrome c-type biogenesis protein CcmB YPO2735 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria YPO2736 IPR002541 Cytochrome c assembly protein YPO2736 IPR003557 Cytochrome c-type biogenesis protein CcmC YPO2737 IPR007078 Haem exporter protein D (CcmD) YPO2738 IPR036127 CcmE-like superfamily YPO2738 IPR004329 CcmE/CycJ protein YPO2739 IPR003567 Cytochrome c-type biogenesis protein YPO2739 IPR003568 Cytochrome c-type biogenesis protein CcmF YPO2739 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal YPO2739 IPR002541 Cytochrome c assembly protein YPO2740 IPR013766 Thioredoxin domain YPO2740 IPR036249 Thioredoxin-like superfamily YPO2740 IPR013740 Redoxin YPO2740 IPR017937 Thioredoxin, conserved site YPO2740 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE YPO2741 IPR019734 Tetratricopeptide repeat YPO2741 IPR005616 CcmH/CycL/Ccl2/NrfF family YPO2741 IPR011990 Tetratricopeptide-like helical domain superfamily YPO2741 IPR013026 Tetratricopeptide repeat-containing domain YPO2741 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily YPO2743 IPR007428 MlaA lipoprotein YPO2744 IPR042117 OMPP1/FadL/TodX superfamily YPO2744 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) YPO2745 IPR035571 UPF0234-like, C-terminal YPO2745 IPR005272 Conserved hypothetical protein CHP00743 YPO2746 IPR020610 Thiolase, active site YPO2746 IPR012806 Acetyl-CoA C-acyltransferase FadI YPO2746 IPR020615 Thiolase, acyl-enzyme intermediate active site YPO2746 IPR016039 Thiolase-like YPO2746 IPR020617 Thiolase, C-terminal YPO2746 IPR020616 Thiolase, N-terminal YPO2746 IPR020613 Thiolase, conserved site YPO2746 IPR002155 Thiolase YPO2747 IPR001753 Enoyl-CoA hydratase/isomerase YPO2747 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site YPO2747 IPR036291 NAD(P)-binding domain superfamily YPO2747 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPO2747 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal YPO2747 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding YPO2747 IPR029045 ClpP/crotonase-like domain superfamily YPO2747 IPR012802 Fatty oxidation complex, alpha subunit FadJ YPO2748 IPR004449 Phosphohistidine phosphatase SixA YPO2748 IPR029033 Histidine phosphatase superfamily YPO2748 IPR013078 Histidine phosphatase superfamily, clade-1 YPO2749 IPR022990 Uncharacterised protein family UPF0115 YPO2749 IPR036063 Smr domain superfamily YPO2749 IPR002625 Smr domain YPO2750 IPR007848 Methyltransferase small domain YPO2750 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO2750 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase YPO2750 IPR004556 Methyltransferase HemK-like YPO2750 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPO2751 IPR000453 Chorismate synthase YPO2751 IPR020541 Chorismate synthase, conserved site YPO2751 IPR035904 Chorismate synthase AroC superfamily YPO2752 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase YPO2752 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily YPO2753 IPR002781 Transmembrane protein TauE-like YPO2754 IPR007411 Elongation factor P hydroxylase YPO2755 IPR014987 Uncharacterised protein family YfcL YPO2756 IPR036188 FAD/NAD(P)-binding domain superfamily YPO2756 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal YPO2756 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC YPO2756 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO2756 IPR006076 FAD dependent oxidoreductase YPO2756 IPR008471 MnmC-like methyltransferase YPO2757 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPO2757 IPR016039 Thiolase-like YPO2757 IPR014031 Beta-ketoacyl synthase, C-terminal YPO2757 IPR014030 Beta-ketoacyl synthase, N-terminal YPO2757 IPR018201 Beta-ketoacyl synthase, active site YPO2757 IPR000794 Beta-ketoacyl synthase YPO2758 IPR004380 Aspartate racemase YPO2758 IPR033134 Asp/Glu racemase, active site 2 YPO2758 IPR018187 Asp/Glu racemase, active site 1 YPO2758 IPR001920 Asp/Glu racemase YPO2758 IPR015942 Asp/Glu/hydantoin racemase YPO2759 IPR000259 Fimbrial-type adhesion domain YPO2759 IPR036937 Fimbrial-type adhesion domain superfamily YPO2759 IPR008966 Adhesion domain superfamily YPO2760 IPR023597 Flagellar regulator Flk YPO2761 IPR000620 EamA domain YPO2763 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPO2763 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YPO2763 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain YPO2763 IPR020921 Erythronate-4-phosphate dehydrogenase YPO2763 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain YPO2763 IPR036291 NAD(P)-binding domain superfamily YPO2763 IPR038251 PdxB, dimerisation domain superfamily YPO2763 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YPO2764 IPR036515 Transposase IS200-like superfamily YPO2764 IPR002686 Transposase IS200-like YPO2765 IPR012280 Semialdehyde dehydrogenase, dimerisation domain YPO2765 IPR036291 NAD(P)-binding domain superfamily YPO2765 IPR000534 Semialdehyde dehydrogenase, NAD-binding YPO2766 IPR020095 Pseudouridine synthase I, TruA, C-terminal YPO2766 IPR020103 Pseudouridine synthase, catalytic domain superfamily YPO2766 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain YPO2766 IPR001406 Pseudouridine synthase I, TruA YPO2767 IPR032816 SNARE associated Golgi protein YPO2767 IPR032818 DedA family YPO2768 IPR041010 Acetyl-coA carboxylase zinc finger domain YPO2768 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal YPO2768 IPR029045 ClpP/crotonase-like domain superfamily YPO2768 IPR034733 Acetyl-CoA carboxylase YPO2768 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit YPO2769 IPR004101 Mur ligase, C-terminal YPO2769 IPR013221 Mur ligase, central YPO2769 IPR036615 Mur ligase, C-terminal domain superfamily YPO2769 IPR018109 Folylpolyglutamate synthetase, conserved site YPO2769 IPR001645 Folylpolyglutamate synthetase YPO2769 IPR036565 Mur-like, catalytic domain superfamily YPO2770 IPR007730 Sporulation-like domain YPO2770 IPR036680 Sporulation-like domain superfamily YPO2770 IPR032898 Cell division protein DedD YPO2771 IPR003825 Colicin V production, CvpA YPO2772 IPR005854 Amidophosphoribosyltransferase YPO2772 IPR029057 Phosphoribosyltransferase-like YPO2772 IPR035584 Amidophosphoribosyltransferase, N-terminal YPO2772 IPR017932 Glutamine amidotransferase type 2 domain YPO2772 IPR000836 Phosphoribosyltransferase domain YPO2772 IPR029055 Nucleophile aminohydrolases, N-terminal YPO2773 IPR004507 Flavin prenyltransferase UbiX-like YPO2773 IPR036551 Flavin prenyltransferase-like YPO2773 IPR003382 Flavoprotein YPO2774 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter YPO2774 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPO2774 IPR018313 Solute-binding protein family 3, conserved site YPO2775 IPR030199 Histidine transport system permease protein HisQ YPO2775 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO2775 IPR035906 MetI-like superfamily YPO2775 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain YPO2776 IPR035906 MetI-like superfamily YPO2776 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain YPO2776 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO2777 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type YPO2777 IPR003593 AAA+ ATPase domain YPO2777 IPR003439 ABC transporter-like YPO2777 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2777 IPR017871 ABC transporter, conserved site YPO2778 IPR010099 Epimerase family protein SDR39U1 YPO2778 IPR001509 NAD-dependent epimerase/dehydratase YPO2778 IPR036291 NAD(P)-binding domain superfamily YPO2778 IPR013549 Domain of unknown function DUF1731 YPO2780 IPR024654 Calcineurin-like phosphoesterase domain, lpxH-type YPO2780 IPR029052 Metallo-dependent phosphatase-like YPO2780 IPR041802 YfcE-like, metallophosphatase domain YPO2780 IPR000979 Phosphodiesterase MJ0936/Vps29 YPO2780 IPR020935 Phosphodiesterase YfcE, conserved site YPO2781 IPR015797 NUDIX hydrolase-like domain superfamily YPO2781 IPR024195 NUDIX hydrolase, YfcD, predicted YPO2781 IPR000086 NUDIX hydrolase domain YPO2782 IPR004703 Phosphotransferase system, sugar-specific permease component YPO2783 IPR001207 Transposase, mutator type YPO2784 IPR012338 Beta-lactamase/transpeptidase-like YPO2784 IPR009647 Penicillin-binding, C-terminal YPO2784 IPR001264 Glycosyl transferase, family 51 YPO2784 IPR023346 Lysozyme-like domain superfamily YPO2784 IPR001460 Penicillin-binding protein, transpeptidase YPO2784 IPR036950 Penicillin binding protein transglycosylase domain YPO2784 IPR011815 Penicillin-binding protein 1C YPO2785 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPO2785 IPR038722 Ner, winged helix-turn-helix DNA-binding domain YPO2793 IPR036624 Hcp1-like superfamily YPO2793 IPR008514 Type VI secretion system effector, Hcp YPO2796 IPR024973 ESPR domain YPO2796 IPR036709 Autotransporter beta-domain superfamily YPO2796 IPR012332 P22 tailspike-like, C-terminal domain superfamily YPO2796 IPR011050 Pectin lyase fold/virulence factor YPO2796 IPR004899 Pertactin, central region YPO2796 IPR003991 Pertactin virulence factor family YPO2796 IPR006315 Outer membrane autotransporter barrel YPO2796 IPR030930 Adhesin of bacterial autotransporter system YPO2796 IPR005546 Autotransporter beta-domain YPO2799 IPR001207 Transposase, mutator type YPO2803 IPR013783 Immunoglobulin-like fold YPO2803 IPR026891 Fibronectin type III-like domain YPO2803 IPR002772 Glycoside hydrolase family 3 C-terminal domain YPO2803 IPR019800 Glycoside hydrolase, family 3, active site YPO2803 IPR001764 Glycoside hydrolase, family 3, N-terminal YPO2803 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily YPO2803 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily YPO2803 IPR017853 Glycoside hydrolase superfamily YPO2805 IPR020471 Aldo/keto reductase YPO2805 IPR023210 NADP-dependent oxidoreductase domain YPO2805 IPR018170 Aldo/keto reductase, conserved site YPO2805 IPR036812 NADP-dependent oxidoreductase domain superfamily YPO2806 IPR036812 NADP-dependent oxidoreductase domain superfamily YPO2806 IPR023210 NADP-dependent oxidoreductase domain YPO2806 IPR020471 Aldo/keto reductase YPO2807 IPR005119 LysR, substrate-binding YPO2807 IPR036388 Winged helix-like DNA-binding domain superfamily YPO2807 IPR036390 Winged helix DNA-binding domain superfamily YPO2807 IPR000847 Transcription regulator HTH, LysR YPO2808 IPR006120 Resolvase, HTH domain YPO2808 IPR036397 Ribonuclease H superfamily YPO2808 IPR012337 Ribonuclease H-like superfamily YPO2808 IPR001584 Integrase, catalytic core YPO2808 IPR017894 HTH domain, IS21 transposase-type YPO2809 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2809 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO2809 IPR003593 AAA+ ATPase domain YPO2809 IPR001270 ClpA/B family YPO2809 IPR002611 IstB-like ATP-binding protein YPO2813 IPR000387 Tyrosine specific protein phosphatases domain YPO2813 IPR000340 Dual specificity phosphatase, catalytic domain YPO2813 IPR029021 Protein-tyrosine phosphatase-like YPO2813 IPR020422 Dual specificity protein phosphatase domain YPO2813 IPR016130 Protein-tyrosine phosphatase, active site YPO2813 IPR003595 Protein-tyrosine phosphatase, catalytic YPO2814 IPR029058 Alpha/Beta hydrolase fold YPO2814 IPR022742 Serine aminopeptidase, S33 YPO2814 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO2814 IPR022744 Methyltransferase domain, putative YPO2815 IPR016676 Phospholipid/glycerol acyltransferase, predicted YPO2815 IPR002123 Phospholipid/glycerol acyltransferase YPO2816 IPR000374 Phosphatidate cytidylyltransferase YPO2817 IPR000462 CDP-alcohol phosphatidyltransferase YPO2824 IPR036291 NAD(P)-binding domain superfamily YPO2824 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase YPO2824 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain YPO2824 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain YPO2824 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site YPO2825 IPR002942 RNA-binding S4 domain YPO2825 IPR036986 RNA-binding S4 domain superfamily YPO2826 IPR002686 Transposase IS200-like YPO2826 IPR036515 Transposase IS200-like superfamily YPO2827 IPR034332 Uracil phosphoribosyltransferase, bacterial-type YPO2827 IPR005765 Uracil phosphoribosyl transferase YPO2827 IPR029057 Phosphoribosyltransferase-like YPO2827 IPR000836 Phosphoribosyltransferase domain YPO2828 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase YPO2828 IPR016188 PurM-like, N-terminal domain YPO2828 IPR036676 PurM-like, C-terminal domain superfamily YPO2828 IPR036921 PurM-like, N-terminal domain superfamily YPO2828 IPR010918 PurM-like, C-terminal domain YPO2829 IPR004607 Phosphoribosylglycinamide formyltransferase YPO2829 IPR036477 Formyl transferase, N-terminal domain superfamily YPO2829 IPR002376 Formyl transferase, N-terminal YPO2829 IPR001555 Phosphoribosylglycinamide formyltransferase, active site YPO2830 IPR016181 Acyl-CoA N-acyltransferase YPO2830 IPR000182 GNAT domain YPO2833 IPR005670 Phosphate transport system permease protein 1 YPO2833 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2833 IPR015850 ABC transporter, phosphate import, PstB YPO2833 IPR017871 ABC transporter, conserved site YPO2833 IPR003439 ABC transporter-like YPO2833 IPR003593 AAA+ ATPase domain YPO2834 IPR005672 Phosphate transport system permease protein PstA YPO2834 IPR035906 MetI-like superfamily YPO2834 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO2835 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO2835 IPR011864 Phosphate ABC transporter, permease protein PstC YPO2835 IPR035906 MetI-like superfamily YPO2836 IPR036832 Polyphosphate kinase N-terminal domain superfamily YPO2836 IPR036830 Polyphosphate kinase middle domain superfamily YPO2836 IPR001736 Phospholipase D/Transphosphatidylase YPO2836 IPR003414 Polyphosphate kinase YPO2836 IPR025198 Polyphosphate kinase N-terminal domain YPO2836 IPR025200 Polyphosphate kinase C-terminal domain 2 YPO2836 IPR024953 Polyphosphate kinase middle domain YPO2836 IPR041108 Polyphosphate kinase, C-terminal domain 1 YPO2837 IPR022371 Exopolyphosphatase YPO2837 IPR003695 Ppx/GppA phosphatase YPO2837 IPR030673 Pyrophosphatase, GppA/Ppx-type YPO2839 IPR000644 CBS domain YPO2839 IPR006668 Magnesium transporter, MgtE intracellular domain YPO2839 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily YPO2839 IPR038076 MgtE, N-terminal domain superfamily YPO2839 IPR006669 Magnesium transporter MgtE YPO2839 IPR038048 Magnesium transporter MgtE, transmembrane domain YPO2839 IPR006667 SLC41 divalent cation transporters, integral membrane domain YPO2840 IPR042054 YegD-like YPO2840 IPR013126 Heat shock protein 70 family YPO2840 IPR018181 Heat shock protein 70, conserved site YPO2841 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO2841 IPR035906 MetI-like superfamily YPO2842 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO2842 IPR035906 MetI-like superfamily YPO2844 IPR004632 4-aminobutyrate aminotransferase, bacterial YPO2844 IPR005814 Aminotransferase class-III YPO2844 IPR015424 Pyridoxal phosphate-dependent transferase YPO2844 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPO2844 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPO2845 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPO2845 IPR000524 Transcription regulator HTH, GntR YPO2845 IPR036388 Winged helix-like DNA-binding domain superfamily YPO2845 IPR036390 Winged helix DNA-binding domain superfamily YPO2845 IPR004839 Aminotransferase, class I/classII YPO2845 IPR015424 Pyridoxal phosphate-dependent transferase YPO2846 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA YPO2846 IPR003593 AAA+ ATPase domain YPO2846 IPR003439 ABC transporter-like YPO2846 IPR017871 ABC transporter, conserved site YPO2846 IPR008995 Molybdate/tungstate binding, C-terminal YPO2846 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2846 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit YPO2846 IPR013611 Transport-associated OB, type 2 YPO2847 IPR022824 Multidrug resistance protein MdtA YPO2847 IPR039562 Membrane fusion protein, biotin-lipoyl like domain YPO2847 IPR006143 RND efflux pump, membrane fusion protein YPO2848 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPO2848 IPR001036 Acriflavin resistance protein YPO2848 IPR022831 Multidrug resistance protein MdtB YPO2849 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPO2849 IPR023931 Multidrug resistance protein MdtC YPO2849 IPR001036 Acriflavin resistance protein YPO2850 IPR004638 Drug resistance transporter EmrB-like YPO2850 IPR011701 Major facilitator superfamily YPO2850 IPR023721 Multidrug resistance protein MdtD YPO2850 IPR020846 Major facilitator superfamily domain YPO2850 IPR036259 MFS transporter superfamily YPO2853 IPR011006 CheY-like superfamily YPO2853 IPR016032 Signal transduction response regulator, C-terminal effector YPO2853 IPR001789 Signal transduction response regulator, receiver domain YPO2853 IPR036388 Winged helix-like DNA-binding domain superfamily YPO2853 IPR039420 Transcriptional regulatory protein WalR-like YPO2853 IPR001867 OmpR/PhoB-type DNA-binding domain YPO2854 IPR036913 YegP-like superfamily YPO2854 IPR010879 Domain of unknown function DUF1508 YPO2855 IPR032525 Peptidase family U32, C-terminal YPO2855 IPR001539 Peptidase U32 YPO2856 IPR001206 Diacylglycerol kinase, catalytic domain YPO2856 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal YPO2856 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily YPO2856 IPR022433 Lipid kinase YegS YPO2856 IPR005218 Diacylglycerol/lipid kinase YPO2857 IPR014453 Inhibitor of vertebrate lysozyme YPO2857 IPR036501 Inhibitor of vertebrate lysozyme superfamily YPO2859 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase YPO2859 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase YPO2859 IPR029056 Ribokinase-like YPO2862 IPR001207 Transposase, mutator type YPO2868 IPR036624 Hcp1-like superfamily YPO2868 IPR008514 Type VI secretion system effector, Hcp YPO2869 IPR036515 Transposase IS200-like superfamily YPO2869 IPR002686 Transposase IS200-like YPO2870 IPR022955 GMP synthase YPO2870 IPR004739 GMP synthase, glutamine amidotransferase YPO2870 IPR001674 GMP synthase, C-terminal YPO2870 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO2870 IPR025777 GMP synthetase ATP pyrophosphatase domain YPO2870 IPR017926 Glutamine amidotransferase YPO2870 IPR022310 NAD/GMP synthase YPO2870 IPR029062 Class I glutamine amidotransferase-like YPO2871 IPR001093 IMP dehydrogenase/GMP reductase YPO2871 IPR000644 CBS domain YPO2871 IPR013785 Aldolase-type TIM barrel YPO2871 IPR005990 Inosine-5'-monophosphate dehydrogenase YPO2871 IPR015875 IMP dehydrogenase / GMP reductase, conserved site YPO2872 IPR020579 Exonuclease VII, large subunit, C-terminal YPO2872 IPR003753 Exonuclease VII, large subunit YPO2872 IPR025824 OB-fold nucleic acid binding domain YPO2873 IPR029037 YfgJ-like YPO2873 IPR010807 Protein of unknown function DUF1407 YPO2875 IPR005225 Small GTP-binding protein domain YPO2875 IPR016484 GTP-binding protein EngA YPO2875 IPR032859 GTPase Der, C-terminal KH-domain-like YPO2875 IPR015946 K homology domain-like, alpha/beta YPO2875 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2875 IPR031166 EngA-type guanine nucleotide-binding (G) domain YPO2875 IPR006073 GTP binding domain YPO2876 IPR017687 Outer membrane protein assembly factor BamB YPO2876 IPR015943 WD40/YVTN repeat-like-containing domain superfamily YPO2876 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily YPO2876 IPR002372 Pyrrolo-quinoline quinone repeat YPO2876 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat YPO2877 IPR026039 Uncharacterised protein family UPF0070 YPO2877 IPR011990 Tetratricopeptide-like helical domain superfamily YPO2877 IPR018704 Tetratricopeptide repeat-like domain YPO2878 IPR033656 Histidyl-anticodon-binding YPO2878 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit YPO2878 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain YPO2878 IPR015807 Histidine-tRNA ligase YPO2878 IPR036621 Anticodon-binding domain superfamily YPO2878 IPR004154 Anticodon-binding YPO2878 IPR006195 Aminoacyl-tRNA synthetase, class II YPO2879 IPR036849 Enolase-like, C-terminal domain superfamily YPO2879 IPR011005 Dihydropteroate synthase-like YPO2879 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial YPO2879 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type YPO2880 IPR001387 Cro/C1-type helix-turn-helix domain YPO2880 IPR023690 Cytoskeleton protein RodZ YPO2880 IPR025194 Domain of unknown function DUF4115 YPO2880 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPO2882 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr YPO2882 IPR027492 Dual-specificity RNA methyltransferase RlmN YPO2882 IPR040072 Methyltransferase (Class A) YPO2882 IPR013785 Aldolase-type TIM barrel YPO2882 IPR007197 Radical SAM YPO2883 IPR034907 Nucleoside diphosphate kinase-like domain YPO2883 IPR036850 Nucleoside diphosphate kinase-like domain superfamily YPO2883 IPR023005 Nucleoside diphosphate kinase, active site YPO2883 IPR001564 Nucleoside diphosphate kinase YPO2886 IPR003991 Pertactin virulence factor family YPO2886 IPR004899 Pertactin, central region YPO2886 IPR011050 Pectin lyase fold/virulence factor YPO2886 IPR012332 P22 tailspike-like, C-terminal domain superfamily YPO2886 IPR036709 Autotransporter beta-domain superfamily YPO2886 IPR006315 Outer membrane autotransporter barrel YPO2886 IPR030930 Adhesin of bacterial autotransporter system YPO2886 IPR005546 Autotransporter beta-domain YPO2888 IPR027945 SseB protein, C-terminal YPO2888 IPR009839 SseB protein N-terminal domain YPO2889 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal YPO2889 IPR008330 Peptidase M17, peptidase B YPO2889 IPR001346 Interferon regulatory factor DNA-binding domain YPO2889 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B YPO2890 IPR007479 ISC system FeS cluster assembly, IscX YPO2890 IPR036762 IscX-like superfamily YPO2891 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria YPO2891 IPR012675 Beta-grasp domain superfamily YPO2891 IPR018298 Adrenodoxin, iron-sulphur binding site YPO2891 IPR036010 2Fe-2S ferredoxin-like superfamily YPO2891 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain YPO2891 IPR001055 Adrenodoxin YPO2892 IPR010236 ISC system FeS cluster assembly, HscA chaperone YPO2892 IPR042039 HscA chaperone, nucleotide-binding domain YPO2892 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily YPO2892 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily YPO2892 IPR018181 Heat shock protein 70, conserved site YPO2892 IPR013126 Heat shock protein 70 family YPO2893 IPR001623 DnaJ domain YPO2893 IPR036386 HscB, C-terminal domain superfamily YPO2893 IPR004640 Co-chaperone Hsc20 YPO2893 IPR036869 Chaperone J-domain superfamily YPO2893 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain YPO2894 IPR017870 FeS cluster insertion, C-terminal, conserved site YPO2894 IPR035903 HesB-like domain superfamily YPO2894 IPR011302 Iron-binding protein IscA, proteobacteria YPO2894 IPR016092 FeS cluster insertion protein YPO2894 IPR000361 FeS cluster biogenesis YPO2895 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal YPO2895 IPR011339 ISC system FeS cluster assembly, IscU scaffold YPO2896 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPO2896 IPR000192 Aminotransferase class V domain YPO2896 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site YPO2896 IPR010240 Cysteine desulfurase IscS YPO2896 IPR016454 Cysteine desulfurase YPO2896 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPO2896 IPR015424 Pyridoxal phosphate-dependent transferase YPO2897 IPR036388 Winged helix-like DNA-binding domain superfamily YPO2897 IPR030489 Transcription regulator Rrf2-type, conserved site YPO2897 IPR036390 Winged helix DNA-binding domain superfamily YPO2897 IPR000944 Transcription regulator Rrf2-type YPO2897 IPR010242 Transcription factor HTH, IscR YPO2898 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPO2898 IPR001537 tRNA/rRNA methyltransferase, SpoU type YPO2898 IPR004384 RNA methyltransferase TrmJ/LasT YPO2898 IPR029028 Alpha/beta knot methyltransferases YPO2899 IPR022337 Inositol monophosphatase, SuhB YPO2899 IPR033942 Inositol monophosphatase YPO2899 IPR020583 Inositol monophosphatase, metal-binding site YPO2899 IPR000760 Inositol monophosphatase-like YPO2899 IPR020550 Inositol monophosphatase, conserved site YPO2900 IPR002686 Transposase IS200-like YPO2900 IPR036515 Transposase IS200-like superfamily YPO2901 IPR011541 Nickel/cobalt transporter, high-affinity YPO2902 IPR016537 Uncharacterised conserved protein UCP008159, YPO2902 IPR010412 Protein of unknown function DUF1007 YPO2903 IPR011608 PRD domain YPO2903 IPR036634 PRD domain superfamily YPO2904 IPR036259 MFS transporter superfamily YPO2904 IPR024989 Major facilitator superfamily associated domain YPO2904 IPR026032 Probable 3-phenylpropionic acid transporter YPO2905 IPR027385 Outer membrane protein beta-barrel domain YPO2905 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel YPO2905 IPR000758 Virulence-related outer membrane protein YPO2907 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site YPO2907 IPR001085 Serine hydroxymethyltransferase YPO2907 IPR015424 Pyridoxal phosphate-dependent transferase YPO2907 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPO2907 IPR039429 Serine hydroxymethyltransferase-like domain YPO2907 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPO2908 IPR012292 Globin/Protoglobin YPO2908 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain YPO2908 IPR017927 FAD-binding domain, ferredoxin reductase-type YPO2908 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase YPO2908 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YPO2908 IPR000971 Globin YPO2908 IPR009050 Globin-like superfamily YPO2908 IPR023950 Flavohemoprotein YPO2908 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPO2908 IPR017938 Riboflavin synthase-like beta-barrel YPO2911 IPR011322 Nitrogen regulatory PII-like, alpha/beta YPO2911 IPR017918 Nitrogen regulatory protein PII, conserved site YPO2911 IPR002332 Nitrogen regulatory protein P-II, urydylation site YPO2911 IPR002187 Nitrogen regulatory protein PII YPO2911 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal YPO2912 IPR000132 Nitrilase/cyanide hydratase, conserved site YPO2912 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO2912 IPR003010 Carbon-nitrogen hydrolase YPO2912 IPR036526 Carbon-nitrogen hydrolase superfamily YPO2912 IPR003694 NAD(+) synthetase YPO2912 IPR022310 NAD/GMP synthase YPO2912 IPR014445 Glutamine-dependent NAD(+) synthetase YPO2914 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2914 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YPO2914 IPR025944 Sigma-54 interaction domain, conserved site YPO2914 IPR009057 Homeobox-like domain superfamily YPO2914 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPO2914 IPR001789 Signal transduction response regulator, receiver domain YPO2914 IPR003593 AAA+ ATPase domain YPO2914 IPR011006 CheY-like superfamily YPO2914 IPR002078 RNA polymerase sigma factor 54 interaction domain YPO2915 IPR025262 Quorum-sensing regulator protein G YPO2916 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPO2916 IPR005467 Histidine kinase domain YPO2916 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPO2916 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPO2916 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPO2916 IPR003594 Histidine kinase/HSP90-like ATPase YPO2917 IPR002686 Transposase IS200-like YPO2917 IPR036515 Transposase IS200-like superfamily YPO2921 IPR010073 Phosphoribosylformylglycinamidine synthase PurL YPO2921 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily YPO2921 IPR036921 PurM-like, N-terminal domain superfamily YPO2921 IPR010918 PurM-like, C-terminal domain YPO2921 IPR017926 Glutamine amidotransferase YPO2921 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal YPO2921 IPR036676 PurM-like, C-terminal domain superfamily YPO2921 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain YPO2921 IPR029062 Class I glutamine amidotransferase-like YPO2922 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPO2922 IPR000189 Prokaryotic transglycosylase, active site YPO2922 IPR008258 Transglycosylase SLT domain 1 YPO2922 IPR023703 Membrane-bound lytic murein transglycosylase F YPO2922 IPR023346 Lysozyme-like domain superfamily YPO2923 IPR002125 Cytidine and deoxycytidylate deaminase domain YPO2923 IPR016192 APOBEC/CMP deaminase, zinc-binding YPO2923 IPR028883 tRNA-specific adenosine deaminase YPO2923 IPR016193 Cytidine deaminase-like YPO2924 IPR023214 HAD superfamily YPO2924 IPR006435 HAD-superfamily hydrolase, subfamily IF, YfhB YPO2924 IPR036412 HAD-like superfamily YPO2925 IPR005486 Glucokinase regulatory protein, conserved site YPO2925 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ YPO2925 IPR040190 N-acetylmuramic acid 6-phosphate etherase/glucokinase regulatory protein YPO2925 IPR009060 UBA-like superfamily YPO2925 IPR001347 Sugar isomerase (SIS) YPO2926 IPR036388 Winged helix-like DNA-binding domain superfamily YPO2926 IPR009057 Homeobox-like domain superfamily YPO2926 IPR000281 Helix-turn-helix protein RpiR YPO2926 IPR035472 RpiR-like, SIS domain YPO2926 IPR001347 Sugar isomerase (SIS) YPO2927 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPO2927 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO2928 IPR036515 Transposase IS200-like superfamily YPO2928 IPR002686 Transposase IS200-like YPO2929 IPR004568 Phosphopantetheine-protein transferase domain YPO2929 IPR002582 Holo-[acyl carrier protein] synthase YPO2929 IPR037143 4'-phosphopantetheinyl transferase domain superfamily YPO2929 IPR008278 4'-phosphopantetheinyl transferase domain YPO2930 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ YPO2930 IPR036130 Pyridoxine 5'-phosphate synthase YPO2930 IPR013785 Aldolase-type TIM barrel YPO2931 IPR001270 ClpA/B family YPO2931 IPR003593 AAA+ ATPase domain YPO2931 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2931 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO2931 IPR002611 IstB-like ATP-binding protein YPO2932 IPR012337 Ribonuclease H-like superfamily YPO2932 IPR017894 HTH domain, IS21 transposase-type YPO2932 IPR001584 Integrase, catalytic core YPO2932 IPR006120 Resolvase, HTH domain YPO2932 IPR036397 Ribonuclease H superfamily YPO2934 IPR010263 Type VI secretion protein, VC_A0114 YPO2938 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath YPO2939 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 YPO2942 IPR001207 Transposase, mutator type YPO2944 IPR013783 Immunoglobulin-like fold YPO2944 IPR018046 Pili assembly chaperone, conserved site YPO2944 IPR001829 Pili assembly chaperone, bacterial YPO2944 IPR016148 Pili assembly chaperone, C-terminal YPO2944 IPR016147 Pili assembly chaperone, N-terminal YPO2944 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YPO2944 IPR008962 PapD-like superfamily YPO2945 IPR039458 FimA-like YPO2945 IPR036937 Fimbrial-type adhesion domain superfamily YPO2945 IPR008966 Adhesion domain superfamily YPO2946 IPR001270 ClpA/B family YPO2946 IPR003959 ATPase, AAA-type, core YPO2946 IPR036628 Clp, N-terminal domain superfamily YPO2946 IPR004176 Clp, N-terminal YPO2946 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2946 IPR017729 Type VI secretion system, ATPase ClpV1 YPO2946 IPR019489 Clp ATPase, C-terminal YPO2946 IPR003593 AAA+ ATPase domain YPO2946 IPR018368 ClpA/B, conserved site 1 YPO2946 IPR028299 ClpA/B, conserved site 2 YPO2946 IPR041546 ClpA/ClpB, AAA lid domain YPO2947 IPR010272 Type VI secretion system, TssF-like YPO2957 IPR011757 Lytic transglycosylase MltB YPO2957 IPR023346 Lysozyme-like domain superfamily YPO2957 IPR031304 Transglycosylase SLT domain 2 YPO2958 IPR026045 Ferric binding protein YPO2958 IPR006061 Solute-binding family 1, conserved site YPO2959 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO2959 IPR035906 MetI-like superfamily YPO2960 IPR008995 Molybdate/tungstate binding, C-terminal YPO2960 IPR030287 Fe(3+) ions import ATP-binding protein FbpC YPO2960 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2960 IPR015853 ABC transporter, ferric cation import, FbpC YPO2960 IPR017871 ABC transporter, conserved site YPO2960 IPR003439 ABC transporter-like YPO2960 IPR003593 AAA+ ATPase domain YPO2962 IPR008514 Type VI secretion system effector, Hcp YPO2962 IPR036624 Hcp1-like superfamily YPO2965 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain YPO2965 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site YPO2965 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE YPO2965 IPR009010 Aspartate decarboxylase-like domain superfamily YPO2965 IPR006657 Molybdopterin dinucleotide-binding domain YPO2965 IPR006656 Molybdopterin oxidoreductase YPO2965 IPR006311 Twin-arginine translocation pathway, signal sequence YPO2966 IPR014297 Dimethylsulphoxide reductase, chain B YPO2966 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPO2966 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO2967 IPR007059 DMSO reductase anchor subunit (DmsC) YPO2968 IPR026269 Tat proofreading chaperone DmsD-type YPO2968 IPR028611 Tat proofreading chaperone DmsD YPO2968 IPR020945 DMSO/Nitrate reductase chaperone YPO2968 IPR036411 TorD-like superfamily YPO2970 IPR008517 Protein of unknown function DUF799 YPO2972 IPR005534 Curli production assembly/transport component CsgG YPO2974 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase YPO2974 IPR016174 Di-haem cytochrome, transmembrane YPO2975 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPO2975 IPR004839 Aminotransferase, class I/classII YPO2975 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPO2975 IPR015424 Pyridoxal phosphate-dependent transferase YPO2976 IPR027443 Isopenicillin N synthase-like YPO2976 IPR010856 Protein of unknown function DUF1479 YPO2977 IPR003836 Glucokinase YPO2979 IPR036390 Winged helix DNA-binding domain superfamily YPO2979 IPR036388 Winged helix-like DNA-binding domain superfamily YPO2979 IPR005119 LysR, substrate-binding YPO2979 IPR000847 Transcription regulator HTH, LysR YPO2980 IPR023210 NADP-dependent oxidoreductase domain YPO2980 IPR036812 NADP-dependent oxidoreductase domain superfamily YPO2982 IPR001046 NRAMP family YPO2983 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial YPO2983 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain YPO2983 IPR002668 Concentrative nucleoside transporter N-terminal domain YPO2983 IPR011657 Concentrative nucleoside transporter C-terminal domain YPO2983 IPR008276 Concentrative nucleoside transporter YPO2984 IPR000924 Glutamyl/glutaminyl-tRNA synthetase YPO2984 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO2984 IPR033910 Glutamyl-tRNA synthetase YPO2984 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain YPO2984 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial YPO2984 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPO2984 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 YPO2984 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding YPO2985 IPR036515 Transposase IS200-like superfamily YPO2985 IPR002686 Transposase IS200-like YPO2988 IPR024530 Putative quorum-sensing-regulated virulence factor YPO2989 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type YPO2989 IPR004150 NAD-dependent DNA ligase, OB-fold YPO2989 IPR018239 NAD-dependent DNA ligase, active site YPO2989 IPR010994 RuvA domain 2-like YPO2989 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 YPO2989 IPR013840 NAD-dependent DNA ligase, N-terminal YPO2989 IPR013839 NAD-dependent DNA ligase, adenylation YPO2989 IPR001679 NAD-dependent DNA ligase YPO2989 IPR033136 NAD-dependent DNA ligase, conserved site YPO2989 IPR041663 DisA/LigA, helix-hairpin-helix motif YPO2989 IPR001357 BRCT domain YPO2989 IPR012340 Nucleic acid-binding, OB-fold YPO2989 IPR036420 BRCT domain superfamily YPO2990 IPR011919 Cell division protein ZipA YPO2990 IPR007449 ZipA, C-terminal FtsZ-binding domain YPO2990 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily YPO2991 IPR022985 Sulfate transporter CysZ YPO2992 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site YPO2992 IPR005859 Cysteine synthase CysK YPO2992 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPO2992 IPR001926 Pyridoxal-phosphate dependent enzyme YPO2992 IPR005856 Cysteine synthase YPO2993 IPR035895 HPr-like superfamily YPO2993 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site YPO2993 IPR002114 Phosphotransferase system, HPr serine phosphorylation site YPO2993 IPR000032 Phosphocarrier protein HPr-like YPO2994 IPR008279 PEP-utilising enzyme, mobile domain YPO2994 IPR040442 Pyruvate kinase-like domain superfamily YPO2994 IPR000121 PEP-utilising enzyme, C-terminal YPO2994 IPR023151 PEP-utilising enzyme, conserved site YPO2994 IPR036637 Phosphohistidine domain superfamily YPO2994 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily YPO2994 IPR024692 Phosphotransferase system, enzyme I YPO2994 IPR018274 PEP-utilising enzyme, active site YPO2994 IPR006318 Phosphotransferase system, enzyme I-like YPO2994 IPR008731 Phosphotransferase system, enzyme I N-terminal YPO2994 IPR036618 PtsI, HPr-binding domain superfamily YPO2995 IPR011055 Duplicated hybrid motif YPO2995 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 YPO2996 IPR002686 Transposase IS200-like YPO2996 IPR036515 Transposase IS200-like superfamily YPO2997 IPR032404 Two-component sensor protein CpxA, periplasmic domain YPO2997 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPO2997 IPR003660 HAMP domain YPO2997 IPR003594 Histidine kinase/HSP90-like ATPase YPO2997 IPR005467 Histidine kinase domain YPO2997 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPO2997 IPR038515 CpxA, periplasmic domain superfamily YPO2997 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPO2997 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPO2998 IPR011006 CheY-like superfamily YPO2998 IPR039420 Transcriptional regulatory protein WalR-like YPO2998 IPR036388 Winged helix-like DNA-binding domain superfamily YPO2998 IPR001789 Signal transduction response regulator, receiver domain YPO2998 IPR001867 OmpR/PhoB-type DNA-binding domain YPO2999 IPR006143 RND efflux pump, membrane fusion protein YPO2999 IPR030190 Macrolide export protein MacA YPO2999 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPO3000 IPR017911 ABC transporter, macrolide export, ATP-binding domain YPO3000 IPR003838 ABC transporter permease protein domain YPO3000 IPR025857 MacB-like periplasmic core domain YPO3000 IPR003439 ABC transporter-like YPO3000 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3000 IPR003593 AAA+ ATPase domain YPO3000 IPR017871 ABC transporter, conserved site YPO3001 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YPO3001 IPR023753 FAD/NAD(P)-binding domain YPO3001 IPR036188 FAD/NAD(P)-binding domain superfamily YPO3001 IPR023536 Coenzyme A disulphide reductase, staphyolococci YPO3001 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily YPO3001 IPR017758 Coenzyme A disulphide reductase YPO3002 IPR038377 Sodium/glucose symporter superfamily YPO3002 IPR001734 Sodium/solute symporter YPO3004 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 YPO3004 IPR036005 Creatinase/aminopeptidase-like YPO3004 IPR000994 Peptidase M24 YPO3004 IPR001714 Peptidase M24, methionine aminopeptidase YPO3006 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPO3006 IPR015424 Pyridoxal phosphate-dependent transferase YPO3006 IPR004839 Aminotransferase, class I/classII YPO3006 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPO3006 IPR027619 Putative C-S lyase YPO3008 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPO3008 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPO3008 IPR003594 Histidine kinase/HSP90-like ATPase YPO3008 IPR003660 HAMP domain YPO3008 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPO3008 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPO3008 IPR005467 Histidine kinase domain YPO3009 IPR011006 CheY-like superfamily YPO3009 IPR001867 OmpR/PhoB-type DNA-binding domain YPO3009 IPR016032 Signal transduction response regulator, C-terminal effector YPO3009 IPR036388 Winged helix-like DNA-binding domain superfamily YPO3009 IPR001789 Signal transduction response regulator, receiver domain YPO3009 IPR039420 Transcriptional regulatory protein WalR-like YPO3011 IPR005858 Cysteine synthase CysM YPO3011 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site YPO3011 IPR001926 Pyridoxal-phosphate dependent enzyme YPO3011 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPO3011 IPR005856 Cysteine synthase YPO3012 IPR005666 Sulphate transport system permease protein 1 YPO3012 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3012 IPR003593 AAA+ ATPase domain YPO3012 IPR008995 Molybdate/tungstate binding, C-terminal YPO3012 IPR017871 ABC transporter, conserved site YPO3012 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal YPO3012 IPR003439 ABC transporter-like YPO3013 IPR011866 Sulphate ABC transporter, permease protein CysW YPO3013 IPR005667 Sulphate ABC transporter permease protein 2 YPO3013 IPR035906 MetI-like superfamily YPO3013 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO3014 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO3014 IPR035906 MetI-like superfamily YPO3014 IPR005667 Sulphate ABC transporter permease protein 2 YPO3014 IPR011865 Sulphate ABC transporter, permease protein CysT YPO3015 IPR034408 Sulphate/thiosulphate-binding site YPO3015 IPR000957 Sulphate/thiosulphate-binding, conserved site YPO3015 IPR005669 Thiosulphate/Sulfate-binding protein YPO3016 IPR011701 Major facilitator superfamily YPO3016 IPR004742 Sialic acid transporter YPO3016 IPR020846 Major facilitator superfamily domain YPO3016 IPR036259 MFS transporter superfamily YPO3017 IPR035472 RpiR-like, SIS domain YPO3017 IPR036388 Winged helix-like DNA-binding domain superfamily YPO3017 IPR009057 Homeobox-like domain superfamily YPO3017 IPR000281 Helix-turn-helix protein RpiR YPO3017 IPR001347 Sugar isomerase (SIS) YPO3019 IPR004375 YhcH/YjgK/YiaL family YPO3019 IPR037012 YhcH/YjgK/YiaL superfamily YPO3020 IPR023945 N-acetylmannosamine kinase, bacterial YPO3020 IPR000600 ROK family YPO3023 IPR011060 Ribulose-phosphate binding barrel YPO3023 IPR013785 Aldolase-type TIM barrel YPO3023 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase YPO3024 IPR002220 DapA-like YPO3024 IPR013785 Aldolase-type TIM barrel YPO3024 IPR020625 Schiff base-forming aldolase, active site YPO3024 IPR005264 N-acetylneuraminate lyase YPO3025 IPR006314 Dyp-type peroxidase YPO3025 IPR011008 Dimeric alpha-beta barrel YPO3026 IPR038714 YfeY-like superfamily YPO3026 IPR010938 Protein of unknown function DUF1131 YPO3027 IPR005220 Bacterial OB-fold YPO3027 IPR016052 Bacteriophage 933W, L0136 YPO3027 IPR036700 Bacterial OB-fold superfamily YPO3028 IPR030930 Adhesin of bacterial autotransporter system YPO3028 IPR003991 Pertactin virulence factor family YPO3028 IPR004899 Pertactin, central region YPO3028 IPR005546 Autotransporter beta-domain YPO3028 IPR036709 Autotransporter beta-domain superfamily YPO3028 IPR012332 P22 tailspike-like, C-terminal domain superfamily YPO3028 IPR006315 Outer membrane autotransporter barrel YPO3028 IPR024973 ESPR domain YPO3028 IPR011050 Pectin lyase fold/virulence factor YPO3031 IPR000182 GNAT domain YPO3031 IPR023072 Acetyltransferase, YpeA YPO3031 IPR016181 Acyl-CoA N-acyltransferase YPO3032 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily YPO3032 IPR001260 Coproporphyrinogen III oxidase, aerobic YPO3032 IPR018375 Coproporphyrinogen III oxidase, conserved site YPO3033 IPR003791 Protein of unknown function UPF0178 YPO3034 IPR042112 Phosphate acetyltransferase, domain 2 YPO3034 IPR002505 Phosphate acetyl/butaryl transferase YPO3034 IPR012188 NAD(P)-dependent malic enzyme YPO3034 IPR042113 Phosphate acetyltransferase, domain 1 YPO3034 IPR037062 Malic enzyme, N-terminal domain superfamily YPO3034 IPR012301 Malic enzyme, N-terminal domain YPO3034 IPR015884 Malic enzyme, conserved site YPO3034 IPR036291 NAD(P)-binding domain superfamily YPO3034 IPR012302 Malic enzyme, NAD-binding YPO3035 IPR015797 NUDIX hydrolase-like domain superfamily YPO3035 IPR004385 Nucleoside diphosphate pyrophosphatase YPO3035 IPR000086 NUDIX hydrolase domain YPO3036 IPR024717 Denitrification system component NapC/NirT/NrfH YPO3036 IPR036280 Multiheme cytochrome superfamily YPO3036 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT YPO3036 IPR038266 NapC/NirT cytochrome c superfamily YPO3036 IPR005126 NapC/NirT cytochrome c, N-terminal YPO3036 IPR011031 Multihaem cytochrome YPO3037 IPR011031 Multihaem cytochrome YPO3037 IPR005591 Nitrate reductase cytochrome c-type subunit NapB YPO3037 IPR036280 Multiheme cytochrome superfamily YPO3038 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain YPO3038 IPR006657 Molybdopterin dinucleotide-binding domain YPO3038 IPR006656 Molybdopterin oxidoreductase YPO3038 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain YPO3038 IPR010051 Periplasmic nitrate reductase, large subunit YPO3038 IPR006311 Twin-arginine translocation pathway, signal sequence YPO3038 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal YPO3038 IPR009010 Aspartate decarboxylase-like domain superfamily YPO3038 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site YPO3039 IPR005623 Chaperone NapD, nitrate reductase assembly YPO3040 IPR004496 Ferredoxin-type protein NapF YPO3040 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO3040 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPO3041 IPR011006 CheY-like superfamily YPO3041 IPR016032 Signal transduction response regulator, C-terminal effector YPO3041 IPR001789 Signal transduction response regulator, receiver domain YPO3041 IPR000792 Transcription regulator LuxR, C-terminal YPO3043 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPO3043 IPR001036 Acriflavin resistance protein YPO3043 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 YPO3045 IPR007404 LexA-binding, inner membrane-associated putative hydrolase YPO3046 IPR013785 Aldolase-type TIM barrel YPO3046 IPR023885 4Fe4S-binding SPASM domain YPO3046 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme YPO3046 IPR007197 Radical SAM YPO3047 IPR017850 Alkaline-phosphatase-like, core domain superfamily YPO3047 IPR000917 Sulfatase, N-terminal YPO3047 IPR024607 Sulfatase, conserved site YPO3048 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3048 IPR008995 Molybdate/tungstate binding, C-terminal YPO3048 IPR017871 ABC transporter, conserved site YPO3048 IPR003439 ABC transporter-like YPO3048 IPR013611 Transport-associated OB, type 2 YPO3048 IPR003593 AAA+ ATPase domain YPO3048 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA YPO3048 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit YPO3049 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO3049 IPR035906 MetI-like superfamily YPO3052 IPR006660 Arsenate reductase-like YPO3052 IPR036249 Thioredoxin-like superfamily YPO3052 IPR006504 Transcriptional regulator Spx/MgsR YPO3053 IPR011650 Peptidase M20, dimerisation domain YPO3053 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria YPO3053 IPR036264 Bacterial exopeptidase dimerisation domain YPO3053 IPR002933 Peptidase M20 YPO3053 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site YPO3054 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily YPO3054 IPR003709 Peptidase M15B YPO3055 IPR020910 Uncharacterised protein family UPF0370 YPO3056 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain YPO3056 IPR038321 TmcA, C-terminal domain superfamily YPO3056 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal YPO3056 IPR032672 TmcA/NAT10/Kre33 YPO3056 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3056 IPR007807 Helicase domain YPO3056 IPR016181 Acyl-CoA N-acyltransferase YPO3056 IPR000182 GNAT domain YPO3056 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA YPO3057 IPR007382 Uncharacterised protein family UPF0756, transmembrame YPO3058 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative YPO3059 IPR033934 Bacterial and archaeal 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide synthase YPO3059 IPR028923 SAICAR synthetase/ADE2, N-terminal YPO3059 IPR018236 SAICAR synthetase, conserved site YPO3059 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase YPO3060 IPR002686 Transposase IS200-like YPO3060 IPR036515 Transposase IS200-like superfamily YPO3061 IPR042268 Outer membrane protein assembly factor BamC, C-terminal YPO3061 IPR010653 NlpB/DapX lipoprotein YPO3061 IPR014524 Outer membrane protein assembly factor BamC YPO3062 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA YPO3062 IPR002220 DapA-like YPO3062 IPR013785 Aldolase-type TIM barrel YPO3062 IPR020625 Schiff base-forming aldolase, active site YPO3062 IPR020624 Schiff base-forming aldolase, conserved site YPO3063 IPR002912 ACT domain YPO3063 IPR016867 Glycine cleavage system transcriptional repressor YPO3064 IPR013766 Thioredoxin domain YPO3064 IPR024706 Peroxiredoxin, AhpC-type YPO3064 IPR036249 Thioredoxin-like superfamily YPO3064 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant YPO3068 IPR002549 Transmembrane protein TqsA-like YPO3069 IPR030873 Beta-barrel assembly-enhancing protease YPO3069 IPR011990 Tetratricopeptide-like helical domain superfamily YPO3069 IPR001915 Peptidase M48 YPO3069 IPR011716 Tetratricopeptide TPR-3 YPO3070 IPR006660 Arsenate reductase-like YPO3070 IPR006659 Arsenate reductase YPO3070 IPR036249 Thioredoxin-like superfamily YPO3071 IPR013317 Chromosomal replication initiator protein DnaA YPO3071 IPR020591 Chromosomal replication control, initiator DnaA-like YPO3071 IPR017788 DnaA regulatory inactivator Hda YPO3071 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae YPO3071 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3072 IPR036515 Transposase IS200-like superfamily YPO3072 IPR002686 Transposase IS200-like YPO3073 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO3073 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase YPO3073 IPR032678 tRNA synthetases class I, catalytic domain YPO3073 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR YPO3073 IPR015803 Cysteine-tRNA ligase YPO3073 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding YPO3074 IPR029000 Cyclophilin-like domain superfamily YPO3074 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase YPO3074 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site YPO3074 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain YPO3075 IPR029052 Metallo-dependent phosphatase-like YPO3075 IPR010138 UDP-2,3-diacylglucosamine hydrolase YPO3075 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type YPO3076 IPR033747 Class I PurE YPO3076 IPR035893 PurE domain superfamily YPO3076 IPR024694 PurE, prokaryotic type YPO3076 IPR000031 PurE domain YPO3077 IPR011761 ATP-grasp fold YPO3077 IPR013815 ATP-grasp fold, subdomain 1 YPO3077 IPR011054 Rudiment single hybrid motif YPO3077 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain YPO3077 IPR016185 Pre-ATP-grasp domain superfamily YPO3077 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit YPO3077 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type YPO3078 IPR038766 Membrane component of ABC transporter, predicted YPO3079 IPR003439 ABC transporter-like YPO3079 IPR003593 AAA+ ATPase domain YPO3079 IPR017871 ABC transporter, conserved site YPO3079 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3080 IPR013830 SGNH hydrolase-type esterase domain YPO3080 IPR036514 SGNH hydrolase superfamily YPO3080 IPR008265 Lipase, GDSL, active site YPO3081 IPR002347 Short-chain dehydrogenase/reductase SDR YPO3081 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPO3081 IPR036291 NAD(P)-binding domain superfamily YPO3082 IPR013766 Thioredoxin domain YPO3082 IPR036249 Thioredoxin-like superfamily YPO3082 IPR011990 Tetratricopeptide-like helical domain superfamily YPO3083 IPR001107 Band 7 domain YPO3083 IPR032435 Band 7, C-terminal extension YPO3083 IPR001972 Stomatin family YPO3083 IPR036013 Band 7/SPFH domain superfamily YPO3083 IPR018080 Band 7/stomatin-like, conserved site YPO3084 IPR002810 NfeD-like, C-terminal domain YPO3085 IPR011789 Cu(I)-responsive transcriptional regulator YPO3085 IPR009061 Putative DNA-binding domain superfamily YPO3085 IPR000551 MerR-type HTH domain YPO3086 IPR023299 P-type ATPase, cytoplasmic domain N YPO3086 IPR027256 P-type ATPase, subfamily IB YPO3086 IPR023298 P-type ATPase, transmembrane domain superfamily YPO3086 IPR008250 P-type ATPase, A domain superfamily YPO3086 IPR006121 Heavy metal-associated domain, HMA YPO3086 IPR036163 Heavy metal-associated domain superfamily YPO3086 IPR036412 HAD-like superfamily YPO3086 IPR017969 Heavy-metal-associated, conserved site YPO3086 IPR018303 P-type ATPase, phosphorylation site YPO3086 IPR023214 HAD superfamily YPO3086 IPR001757 P-type ATPase YPO3087 IPR002816 TraB family YPO3088 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily YPO3088 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC YPO3088 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain YPO3093 IPR020846 Major facilitator superfamily domain YPO3093 IPR036259 MFS transporter superfamily YPO3093 IPR011701 Major facilitator superfamily YPO3094 IPR006153 Cation/H+ exchanger YPO3094 IPR038770 Sodium/solute symporter superfamily YPO3094 IPR036291 NAD(P)-binding domain superfamily YPO3094 IPR003148 Regulator of K+ conductance, N-terminal YPO3094 IPR004771 K+/H+ exchanger YPO3095 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YPO3095 IPR011611 Carbohydrate kinase PfkB YPO3095 IPR029056 Ribokinase-like YPO3096 IPR003856 Polysaccharide chain length determinant N-terminal domain YPO3097 IPR005843 Alpha-D-phosphohexomutase, C-terminal YPO3097 IPR005841 Alpha-D-phosphohexomutase superfamily YPO3097 IPR016066 Alpha-D-phosphohexomutase, conserved site YPO3097 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily YPO3097 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I YPO3097 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III YPO3097 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II YPO3097 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III YPO3098 IPR029044 Nucleotide-diphospho-sugar transferases YPO3098 IPR001173 Glycosyltransferase 2-like YPO3099 IPR011051 RmlC-like cupin domain superfamily YPO3099 IPR029044 Nucleotide-diphospho-sugar transferases YPO3099 IPR014710 RmlC-like jelly roll fold YPO3099 IPR005835 Nucleotidyl transferase domain YPO3099 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal YPO3099 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YPO3104 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain YPO3104 IPR001296 Glycosyl transferase, family 1 YPO3112 IPR036291 NAD(P)-binding domain superfamily YPO3112 IPR001509 NAD-dependent epimerase/dehydratase YPO3113 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase YPO3113 IPR015424 Pyridoxal phosphate-dependent transferase YPO3113 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPO3113 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPO3115 IPR013446 Glucose-1-phosphate cytidylyltransferase YPO3115 IPR029044 Nucleotide-diphospho-sugar transferases YPO3115 IPR005835 Nucleotidyl transferase domain YPO3116 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain YPO3116 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site YPO3116 IPR012675 Beta-grasp domain superfamily YPO3116 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain YPO3116 IPR017927 FAD-binding domain, ferredoxin reductase-type YPO3116 IPR036010 2Fe-2S ferredoxin-like superfamily YPO3116 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YPO3116 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPO3116 IPR017938 Riboflavin synthase-like beta-barrel YPO3117 IPR001015 Ferrochelatase YPO3117 IPR019772 Ferrochelatase, active site YPO3117 IPR033644 Ferrochelatase, C-terminal YPO3117 IPR033659 Ferrochelatase, N-terminal YPO3118 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3118 IPR000850 Adenylate kinase/UMP-CMP kinase YPO3118 IPR006259 Adenylate kinase subfamily YPO3118 IPR033690 Adenylate kinase, conserved site YPO3118 IPR007862 Adenylate kinase, active site lid domain YPO3119 IPR001404 Heat shock protein Hsp90 family YPO3119 IPR037196 HSP90, C-terminal domain YPO3119 IPR020575 Heat shock protein Hsp90, N-terminal YPO3119 IPR020568 Ribosomal protein S5 domain 2-type fold YPO3119 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPO3119 IPR019805 Heat shock protein Hsp90, conserved site YPO3119 IPR003594 Histidine kinase/HSP90-like ATPase YPO3120 IPR034137 RecR, TOPRIM domain YPO3120 IPR006171 TOPRIM domain YPO3120 IPR023627 Recombination protein RecR YPO3120 IPR000093 DNA recombination protein RecR YPO3120 IPR023628 Recombination protein RecR, C4-type zinc finger YPO3120 IPR015967 Recombination protein RecR, conserved site YPO3121 IPR004401 Nucleoid-associated protein YbaB/EbfC family YPO3121 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily YPO3122 IPR001270 ClpA/B family YPO3122 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV YPO3122 IPR022754 DNA polymerase III, gamma subunit, domain III YPO3122 IPR012763 DNA polymerase III, subunit gamma/ tau YPO3122 IPR021029 DNA polymerase III, tau subunit, domain V YPO3122 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal YPO3122 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily YPO3122 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3122 IPR003593 AAA+ ATPase domain YPO3123 IPR000836 Phosphoribosyltransferase domain YPO3123 IPR029057 Phosphoribosyltransferase-like YPO3123 IPR005764 Adenine phosphoribosyl transferase YPO3125 IPR001270 ClpA/B family YPO3125 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO3125 IPR002611 IstB-like ATP-binding protein YPO3125 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3125 IPR003593 AAA+ ATPase domain YPO3126 IPR007401 Protein of unknown function DUF454 YPO3128 IPR019630 Protein of unknown function DUF2496, YbaM-related YPO3129 IPR024393 Mechanosensitive ion channel MscS, porin domain YPO3129 IPR025692 Mechanosensitive ion channel inner membrane domain 1 YPO3129 IPR023408 Mechanosensitive ion channel MscS domain superfamily YPO3129 IPR006686 Mechanosensitive ion channel MscS, conserved site YPO3129 IPR011066 Mechanosensitive ion channel MscS, C-terminal YPO3129 IPR006685 Mechanosensitive ion channel MscS YPO3129 IPR023298 P-type ATPase, transmembrane domain superfamily YPO3129 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 YPO3129 IPR010920 LSM domain superfamily YPO3130 IPR003787 Sulphur relay, DsrE/F-like protein YPO3130 IPR027396 DsrEFH-like YPO3131 IPR013572 Transcription regulator MAATS, C-terminal YPO3131 IPR009057 Homeobox-like domain superfamily YPO3131 IPR001647 DNA-binding HTH domain, TetR-type YPO3131 IPR023772 DNA-binding HTH domain, TetR-type, conserved site YPO3131 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily YPO3132 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPO3132 IPR006143 RND efflux pump, membrane fusion protein YPO3133 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPO3133 IPR001036 Acriflavin resistance protein YPO3133 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 YPO3134 IPR042105 Ribosomal protein L31 superfamily YPO3134 IPR027493 Ribosomal protein L31 type B YPO3134 IPR002150 Ribosomal protein L31 YPO3134 IPR034704 L28p-like YPO3135 IPR000473 Ribosomal protein L36 YPO3135 IPR035977 Ribosomal protein L36 superfamily YPO3137 IPR019693 Biofilm formation regulator YbaJ YPO3138 IPR036666 HHA superfamily YPO3138 IPR007985 Haemolysin expression modulating, HHA YPO3139 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding YPO3139 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain YPO3139 IPR036388 Winged helix-like DNA-binding domain superfamily YPO3140 IPR039366 YscW/ExsB YPO3141 IPR029069 HotDog domain superfamily YPO3141 IPR003703 Acyl-CoA thioesterase YPO3142 IPR001905 Ammonium transporter YPO3142 IPR029020 Ammonium/urea transporter YPO3142 IPR024041 Ammonium transporter AmtB-like domain YPO3142 IPR018047 Ammonium transporter, conserved site YPO3143 IPR002187 Nitrogen regulatory protein PII YPO3143 IPR011322 Nitrogen regulatory PII-like, alpha/beta YPO3143 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal YPO3143 IPR017918 Nitrogen regulatory protein PII, conserved site YPO3143 IPR002332 Nitrogen regulatory protein P-II, urydylation site YPO3144 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3144 IPR017871 ABC transporter, conserved site YPO3144 IPR003439 ABC transporter-like YPO3144 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPO3144 IPR011527 ABC transporter type 1, transmembrane domain YPO3144 IPR003593 AAA+ ATPase domain YPO3144 IPR039421 Type I protein exporter YPO3145 IPR003593 AAA+ ATPase domain YPO3145 IPR011527 ABC transporter type 1, transmembrane domain YPO3145 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPO3145 IPR003439 ABC transporter-like YPO3145 IPR017871 ABC transporter, conserved site YPO3145 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3145 IPR039421 Type I protein exporter YPO3146 IPR011991 ArsR-like helix-turn-helix domain YPO3146 IPR036390 Winged helix DNA-binding domain superfamily YPO3146 IPR019885 Transcription regulator HTH, AsnC-type, conserved site YPO3146 IPR036388 Winged helix-like DNA-binding domain superfamily YPO3146 IPR019888 Transcription regulator AsnC-type YPO3146 IPR011008 Dimeric alpha-beta barrel YPO3146 IPR000485 AsnC-type HTH domain YPO3146 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain YPO3147 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPO3147 IPR001926 Pyridoxal-phosphate dependent enzyme YPO3147 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site YPO3147 IPR005859 Cysteine synthase CysK YPO3147 IPR005856 Cysteine synthase YPO3148 IPR036412 HAD-like superfamily YPO3148 IPR006379 HAD-superfamily hydrolase, subfamily IIB YPO3148 IPR000150 Cof family YPO3148 IPR023214 HAD superfamily YPO3148 IPR023938 HMP-PP phosphatase YPO3149 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain YPO3149 IPR000914 Solute-binding protein family 5 domain YPO3149 IPR039424 Solute-binding protein family 5 YPO3150 IPR018317 Queuosine biosynthesis protein QueC YPO3150 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO3151 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family YPO3151 IPR029069 HotDog domain superfamily YPO3152 IPR004509 Competence protein ComEA, helix-hairpin-helix domain YPO3152 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 YPO3152 IPR010994 RuvA domain 2-like YPO3153 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site YPO3153 IPR027304 Trigger factor/SurA domain superfamily YPO3153 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type YPO3154 IPR000119 Histone-like DNA-binding protein YPO3154 IPR020816 Histone-like DNA-binding protein, conserved site YPO3154 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily YPO3155 IPR003593 AAA+ ATPase domain YPO3155 IPR003959 ATPase, AAA-type, core YPO3155 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3155 IPR027543 Lon protease, bacterial YPO3155 IPR004815 Lon protease, bacterial/eukaryotic-type YPO3155 IPR008269 Peptidase S16, Lon proteolytic domain YPO3155 IPR027065 Lon protease YPO3155 IPR015947 PUA-like superfamily YPO3155 IPR008268 Peptidase S16, active site YPO3155 IPR003111 Lon, substrate-binding domain YPO3155 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPO3155 IPR020568 Ribosomal protein S5 domain 2-type fold YPO3156 IPR038366 Zinc finger, ClpX C4-type superfamily YPO3156 IPR003593 AAA+ ATPase domain YPO3156 IPR003959 ATPase, AAA-type, core YPO3156 IPR019489 Clp ATPase, C-terminal YPO3156 IPR004487 Clp protease, ATP-binding subunit ClpX YPO3156 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3156 IPR010603 Zinc finger, ClpX C4-type YPO3157 IPR001907 ATP-dependent Clp protease proteolytic subunit YPO3157 IPR018215 ClpP, Ser active site YPO3157 IPR033135 ClpP, histidine active site YPO3157 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA YPO3157 IPR029045 ClpP/crotonase-like domain superfamily YPO3158 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain YPO3158 IPR005215 Trigger factor YPO3158 IPR008880 Trigger factor, C-terminal YPO3158 IPR037041 Trigger factor, C-terminal domain superfamily YPO3158 IPR027304 Trigger factor/SurA domain superfamily YPO3158 IPR008881 Trigger factor, ribosome-binding, bacterial YPO3158 IPR036611 Trigger factor ribosome-binding domain superfamily YPO3160 IPR002634 BolA protein YPO3160 IPR036065 BolA-like superfamily YPO3161 IPR012640 Membrane lipoprotein, lipid attachment site YPO3161 IPR005619 Uncharacterised protein family, YajG YPO3162 IPR020846 Major facilitator superfamily domain YPO3162 IPR036259 MFS transporter superfamily YPO3162 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 YPO3162 IPR011701 Major facilitator superfamily YPO3163 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily YPO3163 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like YPO3164 IPR010514 COX aromatic rich motif YPO3164 IPR006333 Cytochrome o ubiquinol oxidase subunit II YPO3164 IPR008972 Cupredoxin YPO3164 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily YPO3164 IPR002429 Cytochrome c oxidase subunit II-like C-terminal YPO3164 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain YPO3164 IPR034227 Ubiquinol oxidase subunit 2, cupredoxin domain YPO3165 IPR014207 Cytochrome o ubiquinol oxidase, subunit I YPO3165 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site YPO3165 IPR000883 Cytochrome c oxidase subunit I YPO3165 IPR036927 Cytochrome c oxidase-like, subunit I superfamily YPO3165 IPR023616 Cytochrome c oxidase-like, subunit I domain YPO3166 IPR000298 Cytochrome c oxidase subunit III-like YPO3166 IPR024791 Cytochrome c oxidase subunit III YPO3166 IPR035973 Cytochrome c oxidase subunit III-like superfamily YPO3166 IPR014206 Cytochrome o ubiquinol oxidase, subunit III YPO3166 IPR033946 Ubiquinol oxidase subunit III domain YPO3166 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle YPO3167 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes YPO3167 IPR014210 Cytochrome o ubiquinol oxidase subunit IV YPO3168 IPR000537 UbiA prenyltransferase family YPO3168 IPR030470 UbiA prenyltransferase conserved site YPO3168 IPR006369 Protohaem IX farnesyltransferase YPO3169 IPR011701 Major facilitator superfamily YPO3169 IPR036259 MFS transporter superfamily YPO3169 IPR020846 Major facilitator superfamily domain YPO3170 IPR007551 Protein of unknown function DUF520 YPO3170 IPR036183 YajQ-like superfamily YPO3170 IPR035571 UPF0234-like, C-terminal YPO3170 IPR035570 UPF0234, N-terminal YPO3171 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPO3171 IPR013328 6-phosphogluconate dehydrogenase, domain 2 YPO3171 IPR036291 NAD(P)-binding domain superfamily YPO3171 IPR013752 Ketopantoate reductase, C-terminal domain YPO3171 IPR013332 Ketopantoate reductase, N-terminal domain YPO3171 IPR003710 Ketopantoate reductase ApbA/PanE YPO3172 IPR002818 DJ-1/PfpI YPO3172 IPR006287 Protein/nucleic acid deglycase DJ-1 YPO3172 IPR029062 Class I glutamine amidotransferase-like YPO3173 IPR001763 Rhodanese-like domain YPO3173 IPR036873 Rhodanese-like domain superfamily YPO3173 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO3173 IPR020536 Thil, AANH domain YPO3173 IPR004114 THUMP domain YPO3173 IPR003720 tRNA sulfurtransferase ThiI YPO3173 IPR026340 Thiazole biosynthesis domain YPO3175 IPR003761 Exonuclease VII, small subunit YPO3175 IPR037004 Exonuclease VII, small subunit superfamily YPO3176 IPR008949 Isoprenoid synthase domain superfamily YPO3176 IPR000092 Polyprenyl synthetase YPO3176 IPR033749 Polyprenyl synthetase, conserved site YPO3177 IPR005474 Transketolase, N-terminal YPO3177 IPR020826 Transketolase binding site YPO3177 IPR005475 Transketolase-like, pyrimidine-binding domain YPO3177 IPR033248 Transketolase, C-terminal domain YPO3177 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II YPO3177 IPR029061 Thiamin diphosphate-binding fold YPO3177 IPR005477 Deoxyxylulose-5-phosphate synthase YPO3178 IPR036515 Transposase IS200-like superfamily YPO3178 IPR002686 Transposase IS200-like YPO3179 IPR007686 YutG/PgpA domain YPO3179 IPR036681 PgpA-like superfamily YPO3179 IPR026037 Phosphatidylglycerophosphatase A YPO3180 IPR036676 PurM-like, C-terminal domain superfamily YPO3180 IPR010918 PurM-like, C-terminal domain YPO3180 IPR036921 PurM-like, N-terminal domain superfamily YPO3180 IPR016188 PurM-like, N-terminal domain YPO3180 IPR006283 Thiamine-monophosphate kinase YPO3181 IPR035926 NusB-like superfamily YPO3181 IPR011605 NusB antitermination factor YPO3181 IPR006027 NusB/RsmB/TIM44 YPO3182 IPR034964 Lumazine synthase YPO3182 IPR002180 Lumazine/riboflavin synthase YPO3182 IPR036467 Lumazine/riboflavin synthase superfamily YPO3183 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal YPO3183 IPR004794 Riboflavin biosynthesis protein RibD YPO3183 IPR016192 APOBEC/CMP deaminase, zinc-binding YPO3183 IPR002125 Cytidine and deoxycytidylate deaminase domain YPO3183 IPR016193 Cytidine deaminase-like YPO3183 IPR024072 Dihydrofolate reductase-like domain superfamily YPO3183 IPR011549 Riboflavin-specific deaminase, C-terminal YPO3184 IPR003796 Ribonucleotide reductase regulator NrdR-like YPO3184 IPR005144 ATP-cone domain YPO3187 IPR002686 Transposase IS200-like YPO3187 IPR036515 Transposase IS200-like superfamily YPO3188 IPR005665 Protein-export membrane protein SecF, bacterial YPO3188 IPR022645 Protein-export membrane protein SecD/SecF, bacterial YPO3188 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial YPO3188 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site YPO3189 IPR027398 SecD export protein N-terminal TM domain YPO3189 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial YPO3189 IPR022645 Protein-export membrane protein SecD/SecF, bacterial YPO3189 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site YPO3189 IPR005791 Protein translocase subunit SecD YPO3190 IPR003849 Preprotein translocase YajC YPO3191 IPR004803 tRNA-guanine transglycosylase YPO3191 IPR036511 Queuine tRNA-ribosyltransferase-like YPO3191 IPR002616 tRNA-guanine(15) transglycosylase-like YPO3192 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA YPO3192 IPR042118 QueA, domain 1 YPO3192 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily YPO3192 IPR042119 QueA, domain 2 YPO3193 IPR007431 Acyl carrier protein phosphodiesterase YPO3193 IPR023491 Acyl carrier protein phosphodiesterase, gammaproteobacteria YPO3194 IPR024706 Peroxiredoxin, AhpC-type YPO3194 IPR036249 Thioredoxin-like superfamily YPO3194 IPR013766 Thioredoxin domain YPO3194 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant YPO3194 IPR019479 Peroxiredoxin, C-terminal YPO3195 IPR002686 Transposase IS200-like YPO3195 IPR036515 Transposase IS200-like superfamily YPO3199 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase YPO3199 IPR036291 NAD(P)-binding domain superfamily YPO3199 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPO3199 IPR002347 Short-chain dehydrogenase/reductase SDR YPO3200 IPR006047 Glycosyl hydrolase, family 13, catalytic domain YPO3200 IPR013780 Glycosyl hydrolase, all-beta YPO3200 IPR017853 Glycoside hydrolase superfamily YPO3200 IPR014756 Immunoglobulin E-set YPO3200 IPR017069 Maltodextrin glucosidase YPO3200 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain YPO3201 IPR004841 Amino acid permease/ SLC12A domain YPO3201 IPR004840 Amino acid permease, conserved site YPO3202 IPR004685 Branched-chain amino acid transport system II carrier protein YPO3203 IPR011862 Phosphate binding protein YPO3203 IPR024370 PBP domain YPO3204 IPR003594 Histidine kinase/HSP90-like ATPase YPO3204 IPR005467 Histidine kinase domain YPO3204 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPO3204 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPO3204 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPO3204 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR YPO3204 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPO3204 IPR021766 Phosphate regulon sensor protein PhoR YPO3204 IPR013767 PAS fold YPO3204 IPR035965 PAS domain superfamily YPO3204 IPR000014 PAS domain YPO3205 IPR011006 CheY-like superfamily YPO3205 IPR001789 Signal transduction response regulator, receiver domain YPO3205 IPR039420 Transcriptional regulatory protein WalR-like YPO3205 IPR001867 OmpR/PhoB-type DNA-binding domain YPO3205 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB YPO3205 IPR036388 Winged helix-like DNA-binding domain superfamily YPO3206 IPR026843 Nuclease SbcCD subunit D, C-terminal domain YPO3206 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type YPO3206 IPR004593 Nuclease SbcCD subunit D YPO3206 IPR029052 Metallo-dependent phosphatase-like YPO3206 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain YPO3207 IPR004592 Nuclease SbcC, gammaproteobacteria type YPO3207 IPR038729 Rad50/SbcC-type AAA domain YPO3207 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3208 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO3208 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3208 IPR002611 IstB-like ATP-binding protein YPO3208 IPR003593 AAA+ ATPase domain YPO3208 IPR001270 ClpA/B family YPO3209 IPR017894 HTH domain, IS21 transposase-type YPO3209 IPR001584 Integrase, catalytic core YPO3209 IPR036397 Ribonuclease H superfamily YPO3209 IPR012337 Ribonuclease H-like superfamily YPO3209 IPR006120 Resolvase, HTH domain YPO3211 IPR000600 ROK family YPO3212 IPR007476 Putative exonuclease, RdgC YPO3213 IPR014710 RmlC-like jelly roll fold YPO3213 IPR011051 RmlC-like cupin domain superfamily YPO3213 IPR009664 Pyrimidine/purine nucleoside phosphorylase YPO3215 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3215 IPR031322 Shikimate kinase/gluconokinase YPO3215 IPR027544 Shikimate kinase 2 YPO3215 IPR023000 Shikimate kinase, conserved site YPO3215 IPR000623 Shikimate kinase/Threonine synthase-like 1 YPO3218 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO3218 IPR013216 Methyltransferase type 11 YPO3220 IPR012349 FMN-binding split barrel YPO3220 IPR023787 Type III secretion system flagellar brake protein YcgR YPO3220 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal YPO3220 IPR009875 PilZ domain YPO3221 IPR015590 Aldehyde dehydrogenase domain YPO3221 IPR012134 Glutamate-5-semialdehyde dehydrogenase YPO3221 IPR016162 Aldehyde dehydrogenase, N-terminal YPO3221 IPR000965 GPR domain YPO3221 IPR016163 Aldehyde dehydrogenase, C-terminal YPO3221 IPR016161 Aldehyde/histidinol dehydrogenase YPO3221 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site YPO3222 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase YPO3222 IPR002478 PUA domain YPO3222 IPR015947 PUA-like superfamily YPO3222 IPR036974 PUA domain superfamily YPO3222 IPR041739 Glutamate-5-kinase domain YPO3222 IPR001048 Aspartate/glutamate/uridylate kinase YPO3222 IPR019797 Glutamate 5-kinase, conserved site YPO3222 IPR036393 Acetylglutamate kinase-like superfamily YPO3222 IPR011529 Glutamate 5-kinase YPO3222 IPR001057 Glutamate/acetylglutamate kinase YPO3223 IPR038208 Sigma factor-binding protein Crl superfamily YPO3223 IPR009986 Sigma factor-binding transcriptional regulator Crl YPO3224 IPR010520 UPF0255 family YPO3224 IPR029058 Alpha/Beta hydrolase fold YPO3225 IPR023747 Xanthine-guanine phosphoribosyltransferase YPO3225 IPR029057 Phosphoribosyltransferase-like YPO3225 IPR000836 Phosphoribosyltransferase domain YPO3228 IPR036390 Winged helix DNA-binding domain superfamily YPO3228 IPR005119 LysR, substrate-binding YPO3228 IPR000847 Transcription regulator HTH, LysR YPO3228 IPR036388 Winged helix-like DNA-binding domain superfamily YPO3230 IPR001160 Peptidase M20C, Xaa-His dipeptidase YPO3230 IPR011650 Peptidase M20, dimerisation domain YPO3230 IPR002933 Peptidase M20 YPO3231 IPR036775 DNA polymerase, Y-family, little finger domain superfamily YPO3231 IPR017961 DNA polymerase, Y-family, little finger domain YPO3231 IPR022880 DNA polymerase IV YPO3231 IPR024728 DNA polymerase type-Y, HhH motif YPO3231 IPR001126 UmuC domain YPO3232 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily YPO3232 IPR030395 Glycerophosphodiester phosphodiesterase domain YPO3234 IPR042159 Flavin-trafficking protein ApbE YPO3234 IPR003374 ApbE-like superfamily YPO3234 IPR024932 Flavin transferase ApbE YPO3235 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase YPO3235 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YPO3235 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPO3235 IPR017927 FAD-binding domain, ferredoxin reductase-type YPO3235 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain YPO3235 IPR012675 Beta-grasp domain superfamily YPO3235 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain YPO3235 IPR036010 2Fe-2S ferredoxin-like superfamily YPO3235 IPR017938 Riboflavin synthase-like beta-barrel YPO3235 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F YPO3236 IPR003667 NqrDE/RnfAE YPO3236 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E YPO3237 IPR003667 NqrDE/RnfAE YPO3237 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D YPO3238 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C YPO3238 IPR007329 FMN-binding YPO3239 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B YPO3239 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD YPO3240 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A YPO3240 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain YPO3241 IPR038063 L,D-transpeptidase catalytic domain-like YPO3241 IPR005490 L,D-transpeptidase catalytic domain YPO3242 IPR017932 Glutamine amidotransferase type 2 domain YPO3242 IPR029055 Nucleophile aminohydrolases, N-terminal YPO3242 IPR026869 Putative glutamine amidotransferase type 2 YPO3243 IPR001347 Sugar isomerase (SIS) YPO3243 IPR035461 GmhA/DiaA YPO3243 IPR004515 Phosphoheptose isomerase YPO3244 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal YPO3244 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type YPO3244 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily YPO3244 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily YPO3244 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal YPO3244 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal YPO3246 IPR041109 HMW1C N-terminal YPO3246 IPR040542 HMW1 domain 2 YPO3247 IPR012334 Pectin lyase fold YPO3247 IPR011050 Pectin lyase fold/virulence factor YPO3247 IPR008638 Filamentous haemagglutinin, N-terminal YPO3248 IPR034746 POTRA domain YPO3248 IPR013686 Polypeptide-transport-associated, ShlB-type YPO3248 IPR005565 Haemolysin activator HlyB, C-terminal YPO3249 IPR010158 Amidase, carbamoylase-type YPO3249 IPR036264 Bacterial exopeptidase dimerisation domain YPO3249 IPR002933 Peptidase M20 YPO3249 IPR011650 Peptidase M20, dimerisation domain YPO3251 IPR036397 Ribonuclease H superfamily YPO3251 IPR012337 Ribonuclease H-like superfamily YPO3251 IPR006120 Resolvase, HTH domain YPO3251 IPR017894 HTH domain, IS21 transposase-type YPO3251 IPR001584 Integrase, catalytic core YPO3252 IPR003593 AAA+ ATPase domain YPO3252 IPR001270 ClpA/B family YPO3252 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO3252 IPR002611 IstB-like ATP-binding protein YPO3252 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3254 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3254 IPR017871 ABC transporter, conserved site YPO3254 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type YPO3254 IPR003439 ABC transporter-like YPO3254 IPR003593 AAA+ ATPase domain YPO3255 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO3255 IPR035906 MetI-like superfamily YPO3255 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain YPO3256 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain YPO3256 IPR035906 MetI-like superfamily YPO3256 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO3257 IPR001320 Ionotropic glutamate receptor YPO3257 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter YPO3257 IPR018313 Solute-binding protein family 3, conserved site YPO3257 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPO3261 IPR000120 Amidase YPO3261 IPR023631 Amidase signature domain YPO3261 IPR014087 1-carboxybiuret hydrolase, AtzE subunit YPO3261 IPR036928 Amidase signature (AS) superfamily YPO3263 IPR020846 Major facilitator superfamily domain YPO3263 IPR011701 Major facilitator superfamily YPO3263 IPR036259 MFS transporter superfamily YPO3264 IPR011606 Branched-chain amino acid transport, permease YPO3265 IPR008407 Branched-chain amino acid transport, AzlD YPO3266 IPR023187 Transcriptional regulator MarR-type, conserved site YPO3266 IPR036388 Winged helix-like DNA-binding domain superfamily YPO3266 IPR036390 Winged helix DNA-binding domain superfamily YPO3266 IPR000835 MarR-type HTH domain YPO3267 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPO3267 IPR005694 Efflux pump membrane protein YPO3268 IPR011701 Major facilitator superfamily YPO3268 IPR004638 Drug resistance transporter EmrB-like YPO3268 IPR036259 MFS transporter superfamily YPO3268 IPR020846 Major facilitator superfamily domain YPO3269 IPR029028 Alpha/beta knot methyltransferases YPO3269 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted YPO3269 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPO3269 IPR013123 RNA 2-O ribose methyltransferase, substrate binding YPO3269 IPR001537 tRNA/rRNA methyltransferase, SpoU type YPO3269 IPR004441 RNA methyltransferase TrmH family YPO3269 IPR029064 50S ribosomal protein L30e-like YPO3270 IPR013766 Thioredoxin domain YPO3270 IPR005746 Thioredoxin YPO3270 IPR036249 Thioredoxin-like superfamily YPO3270 IPR017937 Thioredoxin, conserved site YPO3271 IPR005636 DTW YPO3271 IPR039262 DTW domain-containing protein 2 YPO3272 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain YPO3272 IPR000182 GNAT domain YPO3272 IPR003781 CoA-binding YPO3272 IPR013815 ATP-grasp fold, subdomain 1 YPO3272 IPR011761 ATP-grasp fold YPO3272 IPR016181 Acyl-CoA N-acyltransferase YPO3272 IPR036291 NAD(P)-binding domain superfamily YPO3272 IPR016102 Succinyl-CoA synthetase-like YPO3273 IPR001736 Phospholipase D/Transphosphatidylase YPO3273 IPR025202 Phospholipase D-like domain YPO3273 IPR016270 CDP-alcohol phosphatidyltransferase class-II family YPO3274 IPR017028 Uncharacterised conserved protein UCP034456 YPO3274 IPR018736 Protein of unknown function DUF2279, periplasmic lipoprotein YPO3275 IPR003593 AAA+ ATPase domain YPO3275 IPR003959 ATPase, AAA-type, core YPO3275 IPR017730 Chaperonin ClpB YPO3275 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3275 IPR036628 Clp, N-terminal domain superfamily YPO3275 IPR004176 Clp, N-terminal YPO3275 IPR001270 ClpA/B family YPO3275 IPR019489 Clp ATPase, C-terminal YPO3275 IPR018368 ClpA/B, conserved site 1 YPO3275 IPR041546 ClpA/ClpB, AAA lid domain YPO3275 IPR028299 ClpA/B, conserved site 2 YPO3276 IPR003730 Multi-copper polyphenol oxidoreductase YPO3276 IPR038371 Multi-copper polyphenol oxidoreductase superfamily YPO3276 IPR011324 Cytotoxic necrotizing factor-like, catalytic YPO3277 IPR006225 Pseudouridine synthase, RluC/RluD YPO3277 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site YPO3277 IPR006145 Pseudouridine synthase, RsuA/RluA YPO3277 IPR002942 RNA-binding S4 domain YPO3277 IPR036986 RNA-binding S4 domain superfamily YPO3277 IPR020103 Pseudouridine synthase, catalytic domain superfamily YPO3278 IPR011990 Tetratricopeptide-like helical domain superfamily YPO3278 IPR039565 Outer membrane lipoprotein BamD-like YPO3278 IPR017689 Outer membrane protein assembly factor BamD YPO3279 IPR003489 Ribosome hibernation promoting factor/RaiA YPO3279 IPR036567 Ribosome hibernation promotion factor-like YPO3280 IPR036515 Transposase IS200-like superfamily YPO3280 IPR002686 Transposase IS200-like YPO3282 IPR006120 Resolvase, HTH domain YPO3282 IPR036397 Ribonuclease H superfamily YPO3282 IPR001584 Integrase, catalytic core YPO3282 IPR017894 HTH domain, IS21 transposase-type YPO3282 IPR012337 Ribonuclease H-like superfamily YPO3283 IPR001270 ClpA/B family YPO3283 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3283 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO3283 IPR002611 IstB-like ATP-binding protein YPO3283 IPR003593 AAA+ ATPase domain YPO3285 IPR003099 Prephenate dehydrogenase YPO3285 IPR036291 NAD(P)-binding domain superfamily YPO3285 IPR002701 Chorismate mutase II, prokaryotic-type YPO3285 IPR036979 Chorismate mutase domain superfamily YPO3285 IPR036263 Chorismate mutase type II superfamily YPO3285 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein YPO3285 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPO3285 IPR011277 Chorismate mutase, T-protein YPO3286 IPR006219 DHAP synthase, class 1 YPO3286 IPR006218 DAHP synthetase I/KDSA YPO3286 IPR013785 Aldolase-type TIM barrel YPO3287 IPR011006 CheY-like superfamily YPO3287 IPR007492 LytTR DNA-binding domain YPO3287 IPR001789 Signal transduction response regulator, receiver domain YPO3290 IPR007433 Protein of unknown function DUF481 YPO3291 IPR002686 Transposase IS200-like YPO3291 IPR036515 Transposase IS200-like superfamily YPO3292 IPR038657 Ribosomal protein L19 superfamily YPO3292 IPR018257 Ribosomal protein L19, conserved site YPO3292 IPR008991 Translation protein SH3-like domain superfamily YPO3292 IPR001857 Ribosomal protein L19 YPO3293 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria YPO3293 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal YPO3293 IPR029028 Alpha/beta knot methyltransferases YPO3293 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPO3293 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain YPO3294 IPR011961 16S rRNA processing protein RimM YPO3294 IPR027275 PRC-barrel domain YPO3294 IPR011033 PRC-barrel-like superfamily YPO3294 IPR009000 Translation protein, beta-barrel domain superfamily YPO3294 IPR002676 RimM, N-terminal YPO3294 IPR036976 RimM, N-terminal domain superfamily YPO3295 IPR020592 Ribosomal protein S16, conserved site YPO3295 IPR000307 Ribosomal protein S16 YPO3295 IPR023803 Ribosomal protein S16 domain superfamily YPO3296 IPR004780 Signal recognition particle protein YPO3296 IPR013822 Signal recognition particle SRP54, helical bundle YPO3296 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily YPO3296 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain YPO3296 IPR022941 Signal recognition particle, SRP54 subunit YPO3296 IPR003593 AAA+ ATPase domain YPO3296 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3296 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily YPO3296 IPR004125 Signal recognition particle, SRP54 subunit, M-domain YPO3297 IPR002541 Cytochrome c assembly protein YPO3298 IPR005170 Transporter-associated domain YPO3298 IPR002550 CNNM, transmembrane domain YPO3298 IPR000644 CBS domain YPO3298 IPR036318 FAD-binding, type PCMH-like superfamily YPO3298 IPR016169 FAD-binding, type PCMH, subdomain 2 YPO3299 IPR002686 Transposase IS200-like YPO3299 IPR036515 Transposase IS200-like superfamily YPO3300 IPR003815 S-ribosylhomocysteinase (LuxS) YPO3300 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like YPO3300 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily YPO3301 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain YPO3301 IPR007370 Glutamate--cysteine ligase YPO3301 IPR006334 Glutamate--cysteine ligase, monofunctional YPO3302 IPR032816 SNARE associated Golgi protein YPO3303 IPR023198 Phosphoglycolate phosphatase-like, domain 2 YPO3303 IPR023214 HAD superfamily YPO3303 IPR041492 Haloacid dehalogenase-like hydrolase YPO3303 IPR010976 Beta-phosphoglucomutase hydrolase YPO3303 IPR036412 HAD-like superfamily YPO3303 IPR006439 HAD hydrolase, subfamily IA YPO3304 IPR036107 Carbon storage regulator superfamily YPO3304 IPR003751 Translational regulator CsrA YPO3305 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily YPO3305 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain YPO3305 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal YPO3305 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria YPO3305 IPR003156 DHHA1 domain YPO3305 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily YPO3305 IPR009000 Translation protein, beta-barrel domain superfamily YPO3305 IPR012947 Threonyl/alanyl tRNA synthetase, SAD YPO3305 IPR002318 Alanine-tRNA ligase, class IIc YPO3306 IPR036388 Winged helix-like DNA-binding domain superfamily YPO3306 IPR003783 Regulatory protein RecX YPO3307 IPR003593 AAA+ ATPase domain YPO3307 IPR020584 DNA recombination/repair protein RecA, conserved site YPO3307 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3307 IPR013765 DNA recombination and repair protein RecA YPO3307 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain YPO3307 IPR023400 DNA recombination and repair protein RecA, C-terminal YPO3307 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface YPO3308 IPR008136 CinA, C-terminal YPO3308 IPR036653 CinA-like, C-terminal YPO3309 IPR011701 Major facilitator superfamily YPO3309 IPR020846 Major facilitator superfamily domain YPO3309 IPR036259 MFS transporter superfamily YPO3309 IPR023745 MSF-type transporter, YcaD YPO3312 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPO3312 IPR042016 Apulose kinase YPO3312 IPR000577 Carbohydrate kinase, FGGY YPO3312 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPO3313 IPR033248 Transketolase, C-terminal domain YPO3313 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II YPO3313 IPR029061 Thiamin diphosphate-binding fold YPO3313 IPR005475 Transketolase-like, pyrimidine-binding domain YPO3314 IPR005474 Transketolase, N-terminal YPO3314 IPR029061 Thiamin diphosphate-binding fold YPO3315 IPR001851 ABC transporter, permease YPO3316 IPR003439 ABC transporter-like YPO3316 IPR017871 ABC transporter, conserved site YPO3316 IPR015861 ABC transporter, ribose import, RbsA YPO3316 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3316 IPR003593 AAA+ ATPase domain YPO3318 IPR025997 Periplasmic binding protein YPO3318 IPR028082 Periplasmic binding protein-like I YPO3319 IPR000763 Catalase-peroxidase haem YPO3319 IPR019794 Peroxidase, active site YPO3319 IPR019793 Peroxidases heam-ligand binding site YPO3319 IPR010255 Haem peroxidase superfamily YPO3319 IPR002016 Haem peroxidase YPO3320 IPR010980 Cytochrome c/b562 YPO3320 IPR009155 Cytochrome b562 YPO3321 IPR016174 Di-haem cytochrome, transmembrane YPO3321 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase YPO3322 IPR026269 Tat proofreading chaperone DmsD-type YPO3322 IPR028611 Tat proofreading chaperone DmsD YPO3322 IPR020945 DMSO/Nitrate reductase chaperone YPO3322 IPR036411 TorD-like superfamily YPO3323 IPR007059 DMSO reductase anchor subunit (DmsC) YPO3324 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO3324 IPR014297 Dimethylsulphoxide reductase, chain B YPO3324 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPO3325 IPR006311 Twin-arginine translocation pathway, signal sequence YPO3325 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE YPO3325 IPR009010 Aspartate decarboxylase-like domain superfamily YPO3325 IPR006657 Molybdopterin dinucleotide-binding domain YPO3325 IPR006656 Molybdopterin oxidoreductase YPO3325 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain YPO3325 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site YPO3325 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site YPO3325 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal YPO3326 IPR004661 L-ribulose-5-phosphate 4-epimerase YPO3326 IPR036409 Class II aldolase/adducin N-terminal domain superfamily YPO3326 IPR033748 L-ribulose-5-phosphate 4-epimerase AraD YPO3326 IPR001303 Class II aldolase/adducin N-terminal YPO3327 IPR036388 Winged helix-like DNA-binding domain superfamily YPO3327 IPR014036 DeoR C-terminal sensor domain YPO3327 IPR036390 Winged helix DNA-binding domain superfamily YPO3327 IPR037171 NagB/RpiA transferase-like YPO3327 IPR018356 Transcription regulator, HTH DeoR-type, conserved site YPO3327 IPR001034 DeoR-type HTH domain YPO3329 IPR002686 Transposase IS200-like YPO3329 IPR036515 Transposase IS200-like superfamily YPO3330 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3330 IPR015861 ABC transporter, ribose import, RbsA YPO3330 IPR017871 ABC transporter, conserved site YPO3330 IPR003439 ABC transporter-like YPO3330 IPR003593 AAA+ ATPase domain YPO3331 IPR001851 ABC transporter, permease YPO3332 IPR001851 ABC transporter, permease YPO3333 IPR001719 AP endonuclease 2 YPO3333 IPR036237 Xylose isomerase-like superfamily YPO3333 IPR013022 Xylose isomerase-like, TIM barrel domain YPO3333 IPR004560 L-ribulose-5-phosphate 3-epimerase YPO3334 IPR000577 Carbohydrate kinase, FGGY YPO3334 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPO3334 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPO3334 IPR018483 Carbohydrate kinase, FGGY, conserved site YPO3335 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain YPO3335 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain YPO3335 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily YPO3335 IPR011167 Iron-dependent fumarate hydratase YPO3335 IPR020557 Fumarate lyase, conserved site YPO3337 IPR001714 Peptidase M24, methionine aminopeptidase YPO3337 IPR000994 Peptidase M24 YPO3337 IPR036005 Creatinase/aminopeptidase-like YPO3337 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 YPO3342 IPR025992 Haem-binding domain YPO3342 IPR004852 Di-haem cytochrome c peroxidase YPO3342 IPR036909 Cytochrome c-like domain superfamily YPO3342 IPR009056 Cytochrome c-like domain YPO3343 IPR018313 Solute-binding protein family 3, conserved site YPO3343 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter YPO3343 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPO3346 IPR018334 ArsR-type transcription regulator, HTH motif YPO3346 IPR036390 Winged helix DNA-binding domain superfamily YPO3346 IPR011991 ArsR-like helix-turn-helix domain YPO3346 IPR036388 Winged helix-like DNA-binding domain superfamily YPO3346 IPR001845 HTH ArsR-type DNA-binding domain YPO3347 IPR000802 Arsenical pump membrane protein, ArsB YPO3348 IPR007324 Sugar-binding domain, putative YPO3348 IPR025246 Transposase IS30-like HTH domain YPO3348 IPR037171 NagB/RpiA transferase-like YPO3348 IPR009057 Homeobox-like domain superfamily YPO3348 IPR011991 ArsR-like helix-turn-helix domain YPO3349 IPR012737 Dihydroxyacetone kinase, subunit L YPO3349 IPR004007 DhaL domain YPO3349 IPR036117 DhaL domain superfamily YPO3350 IPR004006 DhaK domain YPO3351 IPR036291 NAD(P)-binding domain superfamily YPO3351 IPR002347 Short-chain dehydrogenase/reductase SDR YPO3351 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPO3352 IPR020843 Polyketide synthase, enoylreductase domain YPO3352 IPR013154 Alcohol dehydrogenase, N-terminal YPO3352 IPR011032 GroES-like superfamily YPO3352 IPR036291 NAD(P)-binding domain superfamily YPO3352 IPR013149 Alcohol dehydrogenase, C-terminal YPO3353 IPR004785 Ribose 5-phosphate isomerase B YPO3353 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily YPO3353 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family YPO3354 IPR005748 DNA mismatch repair protein MutS YPO3354 IPR017261 DNA mismatch repair protein MutS/MSH YPO3354 IPR007695 DNA mismatch repair protein MutS-like, N-terminal YPO3354 IPR007861 DNA mismatch repair protein MutS, clamp YPO3354 IPR007696 DNA mismatch repair protein MutS, core YPO3354 IPR016151 DNA mismatch repair protein MutS, N-terminal YPO3354 IPR036187 DNA mismatch repair protein MutS, core domain superfamily YPO3354 IPR007860 DNA mismatch repair protein MutS, connector domain YPO3354 IPR036678 MutS, connector domain superfamily YPO3354 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3354 IPR000432 DNA mismatch repair protein MutS, C-terminal YPO3355 IPR014284 RNA polymerase sigma-70 like domain YPO3355 IPR000943 RNA polymerase sigma-70 YPO3355 IPR009042 RNA polymerase sigma-70 region 1.2 YPO3355 IPR007627 RNA polymerase sigma-70 region 2 YPO3355 IPR007624 RNA polymerase sigma-70 region 3 YPO3355 IPR007630 RNA polymerase sigma-70 region 4 YPO3355 IPR013325 RNA polymerase sigma factor, region 2 YPO3355 IPR012761 RNA polymerase sigma factor RpoS YPO3355 IPR036388 Winged helix-like DNA-binding domain superfamily YPO3355 IPR013324 RNA polymerase sigma factor, region 3/4-like YPO3356 IPR036779 LysM domain superfamily YPO3356 IPR018392 LysM domain YPO3356 IPR011055 Duplicated hybrid motif YPO3356 IPR016047 Peptidase M23 YPO3357 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO3357 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase YPO3358 IPR036523 SurE-like phosphatase/nucleotidase superfamily YPO3358 IPR030048 Survival protein SurE YPO3358 IPR002828 Survival protein SurE-like phosphatase/nucleotidase YPO3359 IPR011760 Pseudouridine synthase, TruD, insertion domain YPO3359 IPR042214 Pseudouridine synthase, TruD, catalytic domain YPO3359 IPR020119 Pseudouridine synthase TruD, conserved site YPO3359 IPR001656 Pseudouridine synthase, TruD YPO3359 IPR020103 Pseudouridine synthase, catalytic domain superfamily YPO3360 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YPO3360 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site YPO3360 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily YPO3361 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site YPO3361 IPR029044 Nucleotide-diphospho-sugar transferases YPO3361 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YPO3361 IPR034683 Cytidylyltransferase IspD/TarI YPO3362 IPR023081 Cell division protein FtsB YPO3362 IPR007060 Septum formation initiator FtsL/DivIC YPO3363 IPR022721 Protein of unknown function DUF3561 YPO3364 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3364 IPR002891 Adenylyl-sulfate kinase YPO3365 IPR011779 Sulphate adenylyltransferase, large subunit YPO3365 IPR000795 Transcription factor, GTP-binding domain YPO3365 IPR005225 Small GTP-binding protein domain YPO3365 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3365 IPR031157 Tr-type G domain, conserved site YPO3365 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain YPO3365 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal YPO3365 IPR009000 Translation protein, beta-barrel domain superfamily YPO3366 IPR002500 Phosphoadenosine phosphosulphate reductase YPO3366 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO3366 IPR011784 Sulphate adenylyltransferase, small subunit YPO3367 IPR006366 Uroporphyrin-III C-methyltransferase YPO3367 IPR014777 Tetrapyrrole methylase, subdomain 1 YPO3367 IPR036291 NAD(P)-binding domain superfamily YPO3367 IPR037115 Sirohaem synthase, dimerisation domain superfamily YPO3367 IPR012409 Sirohaem synthase YPO3367 IPR035996 Tetrapyrrole methylase superfamily YPO3367 IPR028281 Siroheme synthase, central domain YPO3367 IPR000878 Tetrapyrrole methylase YPO3367 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site YPO3367 IPR014776 Tetrapyrrole methylase, subdomain 2 YPO3367 IPR006367 Sirohaem synthase, N-terminal YPO3367 IPR019478 Sirohaem synthase, dimerisation domain YPO3371 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain YPO3371 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit YPO3371 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain YPO3371 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily YPO3371 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site YPO3372 IPR029039 Flavoprotein-like superfamily YPO3372 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPO3372 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily YPO3372 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YPO3372 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria YPO3372 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase YPO3372 IPR008254 Flavodoxin/nitric oxide synthase YPO3372 IPR001094 Flavodoxin-like YPO3372 IPR017927 FAD-binding domain, ferredoxin reductase-type YPO3372 IPR017938 Riboflavin synthase-like beta-barrel YPO3372 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding YPO3372 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain YPO3373 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily YPO3373 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family YPO3374 IPR024924 7-carboxy-7-deazaguanine synthase-like YPO3374 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria YPO3374 IPR007197 Radical SAM YPO3374 IPR013785 Aldolase-type TIM barrel YPO3375 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily YPO3375 IPR001424 Superoxide dismutase, copper/zinc binding domain YPO3375 IPR018152 Superoxide dismutase, copper/zinc, binding site YPO3375 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone YPO3376 IPR000941 Enolase YPO3376 IPR036849 Enolase-like, C-terminal domain superfamily YPO3376 IPR029017 Enolase-like, N-terminal YPO3376 IPR020810 Enolase, C-terminal TIM barrel domain YPO3376 IPR020809 Enolase, conserved site YPO3376 IPR020811 Enolase, N-terminal YPO3377 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3377 IPR017456 CTP synthase, N-terminal YPO3377 IPR004468 CTP synthase YPO3377 IPR029062 Class I glutamine amidotransferase-like YPO3377 IPR017926 Glutamine amidotransferase YPO3377 IPR033828 CTP synthase GATase domain YPO3378 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core YPO3378 IPR011551 NTP pyrophosphohydrolase MazG YPO3380 IPR033655 RelA, TGS domain YPO3380 IPR012676 TGS-like YPO3380 IPR004095 TGS YPO3380 IPR003607 HD/PDEase domain YPO3380 IPR004811 RelA/SpoT family YPO3380 IPR012675 Beta-grasp domain superfamily YPO3380 IPR002912 ACT domain YPO3380 IPR007685 RelA/SpoT YPO3381 IPR011006 CheY-like superfamily YPO3381 IPR003660 HAMP domain YPO3381 IPR003594 Histidine kinase/HSP90-like ATPase YPO3381 IPR005467 Histidine kinase domain YPO3381 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPO3381 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPO3381 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPO3381 IPR036641 HPT domain superfamily YPO3381 IPR001789 Signal transduction response regulator, receiver domain YPO3381 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPO3381 IPR019247 Histidine kinase BarA, N-terminal YPO3381 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain YPO3382 IPR036034 PDZ superfamily YPO3382 IPR009003 Peptidase S1, PA clan YPO3382 IPR001478 PDZ domain YPO3382 IPR001940 Peptidase S1C YPO3382 IPR011782 Peptidase S1C, Do YPO3383 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily YPO3383 IPR026875 Phosphohydrolase-associated domain YPO3383 IPR006674 HD domain YPO3383 IPR003607 HD/PDEase domain YPO3383 IPR006261 dNTP triphosphohydrolase YPO3383 IPR020779 dNTP triphosphohydrolase, type 1 YPO3384 IPR000845 Nucleoside phosphorylase domain YPO3384 IPR035994 Nucleoside phosphorylase superfamily YPO3384 IPR010049 MTA/SAH nucleosidase YPO3385 IPR002491 ABC transporter periplasmic binding domain YPO3385 IPR023544 ABC transporter, vitamin B12-binding protein YPO3386 IPR005115 Uncharacterised domain UPF0126 YPO3387 IPR023063 FeS cluster insertion protein ErpA YPO3387 IPR035903 HesB-like domain superfamily YPO3387 IPR000361 FeS cluster biogenesis YPO3387 IPR016092 FeS cluster insertion protein YPO3387 IPR017870 FeS cluster insertion, C-terminal, conserved site YPO3388 IPR023861 Chloride channel, ClcA YPO3388 IPR014743 Chloride channel, core YPO3388 IPR001807 Chloride channel, voltage gated YPO3389 IPR015424 Pyridoxal phosphate-dependent transferase YPO3389 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase YPO3389 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPO3389 IPR005814 Aminotransferase class-III YPO3389 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPO3390 IPR037294 ABC transporter, BtuC-like YPO3390 IPR000522 ABC transporter, permease protein, BtuC-like YPO3391 IPR002491 ABC transporter periplasmic binding domain YPO3392 IPR003439 ABC transporter-like YPO3392 IPR003593 AAA+ ATPase domain YPO3392 IPR017871 ABC transporter, conserved site YPO3392 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3393 IPR036950 Penicillin binding protein transglycosylase domain YPO3393 IPR023346 Lysozyme-like domain superfamily YPO3393 IPR028166 Bifunctional transglycosylase second domain YPO3393 IPR012338 Beta-lactamase/transpeptidase-like YPO3393 IPR001264 Glycosyl transferase, family 51 YPO3393 IPR001460 Penicillin-binding protein, transpeptidase YPO3393 IPR011813 Penicillin-binding protein 1B YPO3393 IPR032730 Transglycosylase PBP1b, N-terminal transmembrane domain YPO3394 IPR011545 DEAD/DEAH box helicase domain YPO3394 IPR010225 ATP-dependent helicase HrpB YPO3394 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3394 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal YPO3394 IPR007502 Helicase-associated domain YPO3394 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPO3394 IPR001650 Helicase, C-terminal YPO3395 IPR009097 Cyclic phosphodiesterase YPO3395 IPR014051 Phosphoesterase, HXTX YPO3395 IPR004175 RNA 2',3'-cyclic phosphodiesterase YPO3396 IPR005224 Sugar fermentation stimulation protein YPO3396 IPR040452 Sugar fermentation stimulation protein, C-terminal YPO3396 IPR041465 SfsA, N-terminal OB domain YPO3397 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria YPO3397 IPR037187 DksA, N-terminal domain superfamily YPO3397 IPR000962 Zinc finger, DksA/TraR C4-type YPO3397 IPR012784 RNA polymerase-binding transcription factor DksA YPO3397 IPR020458 Zinc finger, DksA/TraR C4-type conserved site YPO3398 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO3398 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain YPO3398 IPR000924 Glutamyl/glutaminyl-tRNA synthetase YPO3398 IPR022380 Glutamyl-Q tRNA(Asp) synthetase YPO3399 IPR010206 Poly(A) polymerase I YPO3399 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain YPO3399 IPR025866 Polymerase A arginine-rich C-terminal domain YPO3399 IPR002646 Poly A polymerase, head domain YPO3400 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK YPO3400 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily YPO3401 IPR003700 Ketopantoate hydroxymethyltransferase YPO3401 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily YPO3401 IPR040442 Pyruvate kinase-like domain superfamily YPO3402 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO3402 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain YPO3402 IPR003721 Pantoate-beta-alanine ligase YPO3403 IPR003190 Aspartate decarboxylase YPO3403 IPR009010 Aspartate decarboxylase-like domain superfamily YPO3404 IPR002509 NodB homology domain YPO3404 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YPO3405 IPR000412 ABC-2 transporter YPO3405 IPR013525 ABC-2 type transporter YPO3406 IPR003593 AAA+ ATPase domain YPO3406 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3406 IPR017871 ABC transporter, conserved site YPO3406 IPR003439 ABC transporter-like YPO3407 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site YPO3407 IPR036874 Carbonic anhydrase superfamily YPO3407 IPR001765 Carbonic anhydrase YPO3408 IPR005904 Hypoxanthine phosphoribosyl transferase YPO3408 IPR000836 Phosphoribosyltransferase domain YPO3408 IPR029057 Phosphoribosyltransferase-like YPO3409 IPR011707 Multicopper oxidase, type 3 YPO3409 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal YPO3409 IPR006311 Twin-arginine translocation pathway, signal sequence YPO3409 IPR008972 Cupredoxin YPO3409 IPR011706 Multicopper oxidase, type 2 YPO3409 IPR002355 Multicopper oxidase, copper-binding site YPO3409 IPR001117 Multicopper oxidase, type 1 YPO3410 IPR019114 Chaperone lipoprotein, PulS/OutS-like YPO3410 IPR038432 PulS/OutS-like superfamily YPO3411 IPR035246 Spermidine synthase, tetramerisation domain YPO3411 IPR001045 Spermidine/spermine synthases YPO3411 IPR030373 Polyamine biosynthesis domain, conserved site YPO3411 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO3411 IPR037163 Spermidine synthase, tetramerisation domain superfamily YPO3411 IPR030374 Polyamine biosynthesis domain YPO3412 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic YPO3412 IPR009165 S-adenosylmethionine decarboxylase, bacterial YPO3412 IPR016067 S-adenosylmethionine decarboxylase, core YPO3413 IPR000620 EamA domain YPO3414 IPR008249 Uncharacterised protein family UPF0231 YPO3415 IPR015929 Aconitase B, swivel YPO3415 IPR015932 Aconitase, domain 2 YPO3415 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YPO3415 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 YPO3415 IPR015933 Aconitase B, HEAT-like domain YPO3415 IPR004406 Aconitase B YPO3415 IPR036008 Aconitase, iron-sulfur domain YPO3415 IPR018136 Aconitase family, 4Fe-4S cluster binding site YPO3415 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain YPO3415 IPR036288 Aconitase B, HEAT-like domain superfamily YPO3416 IPR002686 Transposase IS200-like YPO3416 IPR036515 Transposase IS200-like superfamily YPO3417 IPR036188 FAD/NAD(P)-binding domain superfamily YPO3417 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YPO3417 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I YPO3417 IPR006258 Dihydrolipoamide dehydrogenase YPO3417 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily YPO3417 IPR023753 FAD/NAD(P)-binding domain YPO3417 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site YPO3418 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site YPO3418 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain YPO3418 IPR011053 Single hybrid motif YPO3418 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex YPO3418 IPR000089 Biotin/lipoyl attachment YPO3418 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily YPO3418 IPR036625 E3-binding domain superfamily YPO3418 IPR004167 Peripheral subunit-binding domain YPO3419 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II YPO3419 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal YPO3419 IPR004660 Pyruvate dehydrogenase E1 component YPO3419 IPR005474 Transketolase, N-terminal YPO3419 IPR041621 Pyruvate dehydrogenase E1 component, middle domain YPO3419 IPR029061 Thiamin diphosphate-binding fold YPO3420 IPR011711 GntR, C-terminal YPO3420 IPR008920 Transcription regulator FadR/GntR, C-terminal YPO3420 IPR000524 Transcription regulator HTH, GntR YPO3420 IPR036388 Winged helix-like DNA-binding domain superfamily YPO3420 IPR036390 Winged helix DNA-binding domain superfamily YPO3421 IPR004841 Amino acid permease/ SLC12A domain YPO3421 IPR004840 Amino acid permease, conserved site YPO3422 IPR031347 Protein AmpE YPO3423 IPR002502 N-acetylmuramoyl-L-alanine amidase domain YPO3423 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily YPO3424 IPR013785 Aldolase-type TIM barrel YPO3424 IPR004393 Nicotinate-nucleotide pyrophosphorylase YPO3424 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD YPO3424 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal YPO3424 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily YPO3424 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal YPO3424 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal YPO3425 IPR012902 Prokaryotic N-terminal methylation site YPO3426 IPR007831 General secretory system II, protein E, N-terminal YPO3426 IPR001482 Type II/IV secretion system protein YPO3426 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3427 IPR042094 Type II secretion system F domain superfamily YPO3427 IPR018076 Type II secretion system F domain YPO3427 IPR001992 Type II secretion system conserved site YPO3427 IPR003004 GspF/PilC family YPO3428 IPR005993 GMP reductase YPO3428 IPR001093 IMP dehydrogenase/GMP reductase YPO3428 IPR015875 IMP dehydrogenase / GMP reductase, conserved site YPO3428 IPR013785 Aldolase-type TIM barrel YPO3430 IPR001977 Dephospho-CoA kinase YPO3430 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3431 IPR009777 Cell division protein ZapD YPO3431 IPR027462 Z ring-associated protein D, C-terminal YPO3431 IPR036268 ZapD domain superfamily YPO3432 IPR005584 DNA gyrase inhibitor YacG YPO3432 IPR013088 Zinc finger, NHR/GATA-type YPO3433 IPR036515 Transposase IS200-like superfamily YPO3433 IPR002686 Transposase IS200-like YPO3434 IPR017894 HTH domain, IS21 transposase-type YPO3434 IPR036397 Ribonuclease H superfamily YPO3434 IPR012337 Ribonuclease H-like superfamily YPO3434 IPR006120 Resolvase, HTH domain YPO3434 IPR001584 Integrase, catalytic core YPO3435 IPR003593 AAA+ ATPase domain YPO3435 IPR001270 ClpA/B family YPO3435 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO3435 IPR002611 IstB-like ATP-binding protein YPO3435 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3436 IPR042121 MutL, C-terminal domain, regulatory subdomain YPO3436 IPR042120 MutL, C-terminal domain, dimerisation subdomain YPO3436 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPO3436 IPR020568 Ribosomal protein S5 domain 2-type fold YPO3436 IPR037198 MutL, C-terminal domain superfamily YPO3436 IPR014762 DNA mismatch repair, conserved site YPO3436 IPR020667 DNA mismatch repair protein, MutL YPO3436 IPR002099 DNA mismatch repair protein family, N-terminal YPO3436 IPR013507 DNA mismatch repair protein, S5 domain 2-like YPO3436 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPO3436 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms YPO3436 IPR014790 MutL, C-terminal, dimerisation YPO3438 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPO3438 IPR013762 Integrase-like, catalytic domain superfamily YPO3438 IPR002104 Integrase, catalytic domain YPO3438 IPR038488 Integrase, DNA-binding domain superfamily YPO3438 IPR025166 Integrase, DNA-binding domain YPO3438 IPR010998 Integrase/recombinase, N-terminal YPO3439 IPR030923 LPS export ABC transporter permease LptG YPO3439 IPR005495 Permease LptG/LptF-related YPO3440 IPR030922 LPS export ABC transporter permease LptF YPO3440 IPR005495 Permease LptG/LptF-related YPO3441 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal YPO3441 IPR023042 Peptidase M17, leucine aminopeptidase YPO3441 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal YPO3441 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B YPO3442 IPR007459 DNA polymerase III chi subunit, HolC YPO3442 IPR036768 DNA polymerase III subunit chi superfamily YPO3443 IPR002300 Aminoacyl-tRNA synthetase, class Ia YPO3443 IPR002303 Valine-tRNA ligase YPO3443 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain YPO3443 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm YPO3443 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily YPO3443 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding YPO3443 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm YPO3443 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO3443 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding YPO3443 IPR033705 Valyl tRNA synthetase, anticodon-binding domain YPO3443 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPO3444 IPR016181 Acyl-CoA N-acyltransferase YPO3444 IPR000182 GNAT domain YPO3445 IPR009671 Regulator of ribonuclease activity B domain YPO3445 IPR016716 Regulator of ribonuclease activity B YPO3445 IPR036701 RraB-like superfamily YPO3446 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily YPO3446 IPR006130 Aspartate/ornithine carbamoyltransferase YPO3446 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding YPO3446 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain YPO3446 IPR024904 Ornithine carbamoyltransferase YPO3446 IPR002292 Ornithine/putrescine carbamoyltransferase YPO3447 IPR004375 YhcH/YjgK/YiaL family YPO3447 IPR037012 YhcH/YjgK/YiaL superfamily YPO3450 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO3450 IPR035906 MetI-like superfamily YPO3451 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YPO3451 IPR035906 MetI-like superfamily YPO3451 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO3452 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3452 IPR003593 AAA+ ATPase domain YPO3452 IPR003439 ABC transporter-like YPO3452 IPR017871 ABC transporter, conserved site YPO3452 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YPO3453 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3453 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YPO3453 IPR003593 AAA+ ATPase domain YPO3453 IPR003439 ABC transporter-like YPO3453 IPR017871 ABC transporter, conserved site YPO3454 IPR001150 Glycine radical domain YPO3454 IPR019777 Formate C-acetyltransferase glycine radical, conserved site YPO3454 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic YPO3454 IPR005144 ATP-cone domain YPO3455 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic YPO3455 IPR034457 Organic radical-activating enzymes YPO3455 IPR001989 Radical-activating enzyme, conserved site YPO3455 IPR013785 Aldolase-type TIM barrel YPO3456 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF YPO3456 IPR000524 Transcription regulator HTH, GntR YPO3456 IPR011663 UbiC transcription regulator-associated YPO3456 IPR036388 Winged helix-like DNA-binding domain superfamily YPO3456 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily YPO3456 IPR036390 Winged helix DNA-binding domain superfamily YPO3457 IPR009609 Phosphonate metabolism PhnG YPO3458 IPR008772 Bacterial phosphonate metabolism, PhnH YPO3458 IPR038058 PhnH-like superfamily YPO3459 IPR008773 Phosphonate metabolism protein PhnI YPO3460 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase YPO3461 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3461 IPR003439 ABC transporter-like YPO3461 IPR003593 AAA+ ATPase domain YPO3461 IPR017871 ABC transporter, conserved site YPO3461 IPR012700 Phosphonate C-P lyase system, PhnK YPO3462 IPR003593 AAA+ ATPase domain YPO3462 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3462 IPR012701 Phosphonate C-P lyase system, PhnL YPO3462 IPR017871 ABC transporter, conserved site YPO3462 IPR003439 ABC transporter-like YPO3463 IPR011059 Metal-dependent hydrolase, composite domain superfamily YPO3463 IPR013108 Amidohydrolase 3 YPO3463 IPR012696 Phosphonate metabolism PhnM YPO3463 IPR032466 Metal-dependent hydrolase YPO3464 IPR008145 Guanylate kinase/L-type calcium channel beta subunit YPO3464 IPR008144 Guanylate kinase-like domain YPO3464 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN YPO3464 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3465 IPR017693 Phosphonate metabolism protein PhnP YPO3465 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YPO3465 IPR001279 Metallo-beta-lactamase YPO3465 IPR035682 Phosphonate metabolism protein, MBL domain YPO3466 IPR000534 Semialdehyde dehydrogenase, NAD-binding YPO3466 IPR036291 NAD(P)-binding domain superfamily YPO3466 IPR016040 NAD(P)-binding domain YPO3467 IPR012349 FMN-binding split barrel YPO3467 IPR011194 Uncharacterised protein family UPF0306 YPO3469 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3469 IPR017871 ABC transporter, conserved site YPO3469 IPR003439 ABC transporter-like YPO3469 IPR003593 AAA+ ATPase domain YPO3469 IPR005116 Transport-associated OB, type 1 YPO3469 IPR008995 Molybdate/tungstate binding, C-terminal YPO3469 IPR040582 MalK, OB fold domain YPO3470 IPR035906 MetI-like superfamily YPO3470 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO3471 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO3471 IPR035906 MetI-like superfamily YPO3472 IPR006059 Bacterial extracellular solute-binding protein YPO3475 IPR022992 Uncharacterised protein family UPF0213, GIY-YIG endonuclease YPO3475 IPR000305 GIY-YIG endonuclease YPO3475 IPR035901 GIY-YIG endonuclease superfamily YPO3476 IPR016181 Acyl-CoA N-acyltransferase YPO3476 IPR000182 GNAT domain YPO3477 IPR036527 SCP2 sterol-binding domain superfamily YPO3477 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT YPO3477 IPR003033 SCP2 sterol-binding domain YPO3477 IPR039543 Lipid-binding protein POX18/YhbT/NSL-TP1 YPO3479 IPR001539 Peptidase U32 YPO3479 IPR036206 Thiamin phosphate synthase superfamily YPO3480 IPR001539 Peptidase U32 YPO3481 IPR012640 Membrane lipoprotein, lipid attachment site YPO3481 IPR003423 Outer membrane efflux protein YPO3481 IPR010131 RND efflux system, outer membrane lipoprotein, NodT YPO3482 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 YPO3482 IPR001036 Acriflavin resistance protein YPO3482 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPO3483 IPR006143 RND efflux pump, membrane fusion protein YPO3483 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain YPO3484 IPR019949 Luciferase family oxidoreductase, group 1 YPO3484 IPR036661 Luciferase-like domain superfamily YPO3484 IPR011251 Luciferase-like domain YPO3485 IPR001387 Cro/C1-type helix-turn-helix domain YPO3485 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPO3488 IPR011545 DEAD/DEAH box helicase domain YPO3488 IPR014014 RNA helicase, DEAD-box type, Q motif YPO3488 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site YPO3488 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3488 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily YPO3488 IPR001650 Helicase, C-terminal YPO3488 IPR021046 Cold-shock protein, DEAD box A, C-terminal YPO3488 IPR034415 CsdA, RNA recognition motif YPO3488 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPO3488 IPR028618 ATP-dependent RNA helicase DeaD YPO3488 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain YPO3489 IPR019734 Tetratricopeptide repeat YPO3489 IPR011990 Tetratricopeptide-like helical domain superfamily YPO3489 IPR023605 Lipoprotein NlpI YPO3489 IPR013026 Tetratricopeptide repeat-containing domain YPO3489 IPR013105 Tetratricopeptide repeat 2 YPO3490 IPR036612 K Homology domain, type 1 superfamily YPO3490 IPR004088 K Homology domain, type 1 YPO3490 IPR004087 K Homology domain YPO3490 IPR036345 Exoribonuclease, PH domain 2 superfamily YPO3490 IPR015847 Exoribonuclease, phosphorolytic domain 2 YPO3490 IPR001247 Exoribonuclease, phosphorolytic domain 1 YPO3490 IPR012340 Nucleic acid-binding, OB-fold YPO3490 IPR012162 Polyribonucleotide nucleotidyltransferase YPO3490 IPR003029 S1 domain YPO3490 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain YPO3490 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily YPO3490 IPR020568 Ribosomal protein S5 domain 2-type fold YPO3490 IPR022967 RNA-binding domain, S1 YPO3490 IPR027408 PNPase/RNase PH domain superfamily YPO3491 IPR025948 HTH-like domain YPO3491 IPR038965 Transposase InsF-like YPO3491 IPR001584 Integrase, catalytic core YPO3491 IPR012337 Ribonuclease H-like superfamily YPO3491 IPR036397 Ribonuclease H superfamily YPO3493 IPR000589 Ribosomal protein S15 YPO3493 IPR009068 S15/NS1, RNA-binding YPO3493 IPR005290 Ribosomal protein S15, bacterial-type YPO3494 IPR032819 tRNA pseudouridylate synthase B, C-terminal YPO3494 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal YPO3494 IPR014780 tRNA pseudouridine synthase II, TruB YPO3494 IPR036974 PUA domain superfamily YPO3494 IPR015947 PUA-like superfamily YPO3494 IPR002501 Pseudouridine synthase II, N-terminal YPO3494 IPR020103 Pseudouridine synthase, catalytic domain superfamily YPO3495 IPR000238 Ribosome-binding factor A YPO3495 IPR015946 K homology domain-like, alpha/beta YPO3495 IPR023799 Ribosome-binding factor A domain superfamily YPO3495 IPR020053 Ribosome-binding factor A, conserved site YPO3496 IPR023115 Translation initiation factor IF- 2, domain 3 YPO3496 IPR015760 Translation initiation factor IF- 2 YPO3496 IPR000178 Translation initiation factor aIF-2, bacterial-like YPO3496 IPR000795 Transcription factor, GTP-binding domain YPO3496 IPR006847 Translation initiation factor IF-2, N-terminal YPO3496 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3496 IPR036925 Translation initiation factor IF-2, domain 3 superfamily YPO3496 IPR009061 Putative DNA-binding domain superfamily YPO3496 IPR005225 Small GTP-binding protein domain YPO3496 IPR004161 Translation elongation factor EFTu-like, domain 2 YPO3496 IPR009000 Translation protein, beta-barrel domain superfamily YPO3496 IPR013575 Initiation factor 2 associated domain, bacterial YPO3497 IPR013735 Transcription factor NusA, N-terminal YPO3497 IPR003029 S1 domain YPO3497 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical YPO3497 IPR015946 K homology domain-like, alpha/beta YPO3497 IPR022967 RNA-binding domain, S1 YPO3497 IPR036555 NusA, N-terminal domain superfamily YPO3497 IPR030842 Transcription termination/antitermination protein NusA, bacterial YPO3497 IPR012340 Nucleic acid-binding, OB-fold YPO3497 IPR025249 KH domain, NusA-like YPO3497 IPR010214 Transcription termination factor NusA, C-terminal duplication YPO3497 IPR010213 Transcription termination factor NusA YPO3497 IPR009019 K homology domain superfamily, prokaryotic type YPO3498 IPR028998 Ribosome maturation factor RimP, C-terminal YPO3498 IPR028989 Ribosome maturation factor RimP, N-terminal YPO3498 IPR035956 RimP, N-terminal domain superfamily YPO3498 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily YPO3498 IPR003728 Ribosome maturation factor RimP YPO3499 IPR004692 Preprotein translocase SecG subunit YPO3500 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II YPO3500 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III YPO3500 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III YPO3500 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily YPO3500 IPR016066 Alpha-D-phosphohexomutase, conserved site YPO3500 IPR005841 Alpha-D-phosphohexomutase superfamily YPO3500 IPR006352 Phosphoglucosamine mutase, bacterial type YPO3500 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I YPO3500 IPR005843 Alpha-D-phosphohexomutase, C-terminal YPO3501 IPR006390 Dihydropteroate synthase YPO3501 IPR011005 Dihydropteroate synthase-like YPO3501 IPR000489 Pterin-binding domain YPO3502 IPR037219 Peptidase M41-like YPO3502 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3502 IPR003960 ATPase, AAA-type, conserved site YPO3502 IPR003959 ATPase, AAA-type, core YPO3502 IPR005936 Peptidase, FtsH YPO3502 IPR003593 AAA+ ATPase domain YPO3502 IPR041569 AAA ATPase, AAA+ lid domain YPO3502 IPR011546 Peptidase M41, FtsH extracellular YPO3502 IPR000642 Peptidase M41 YPO3503 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO3503 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria YPO3503 IPR002877 Ribosomal RNA methyltransferase FtsJ domain YPO3503 IPR015507 Ribosomal RNA large subunit methyltransferase E YPO3504 IPR001890 RNA-binding, CRM domain YPO3504 IPR035920 YhbY-like superfamily YPO3504 IPR017924 RNA-binding protein YhbY YPO3505 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal YPO3505 IPR023459 Transcription elongation factor GreA/GreB family YPO3505 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal YPO3505 IPR028624 Transcription elongation factor GreA/GreB YPO3505 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily YPO3505 IPR018151 Transcription elongation factor, GreA/GreB, conserved site YPO3505 IPR006359 Transcription elongation factor GreA YPO3505 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily YPO3506 IPR012338 Beta-lactamase/transpeptidase-like YPO3506 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C YPO3507 IPR036388 Winged helix-like DNA-binding domain superfamily YPO3507 IPR039420 Transcriptional regulatory protein WalR-like YPO3507 IPR001789 Signal transduction response regulator, receiver domain YPO3507 IPR001867 OmpR/PhoB-type DNA-binding domain YPO3507 IPR011006 CheY-like superfamily YPO3508 IPR003660 HAMP domain YPO3508 IPR003594 Histidine kinase/HSP90-like ATPase YPO3508 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPO3508 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPO3508 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPO3508 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPO3508 IPR005467 Histidine kinase domain YPO3509 IPR014100 GTP-binding protein Obg/CgtA YPO3509 IPR006169 GTP1/OBG domain YPO3509 IPR036726 GTP1/OBG domain superfamily YPO3509 IPR006073 GTP binding domain YPO3509 IPR006074 GTP1/OBG, conserved site YPO3509 IPR031167 OBG-type guanine nucleotide-binding (G) domain YPO3509 IPR035101 GTP-binding protein, Obg-type YPO3509 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3510 IPR000620 EamA domain YPO3511 IPR001684 Ribosomal protein L27 YPO3511 IPR018261 Ribosomal protein L27, conserved site YPO3512 IPR028909 Ribosomal protein L21-like YPO3512 IPR018258 Ribosomal protein L21, conserved site YPO3512 IPR001787 Ribosomal protein L21 YPO3512 IPR036164 L21-like superfamily YPO3513 IPR008949 Isoprenoid synthase domain superfamily YPO3513 IPR033749 Polyprenyl synthetase, conserved site YPO3513 IPR000092 Polyprenyl synthetase YPO3514a IPR038722 Ner, winged helix-turn-helix DNA-binding domain YPO3514a IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPO3516 IPR023958 Malate dehydrogenase, type 1, bacterial YPO3516 IPR001557 L-lactate/malate dehydrogenase YPO3516 IPR022383 Lactate/malate dehydrogenase, C-terminal YPO3516 IPR001236 Lactate/malate dehydrogenase, N-terminal YPO3516 IPR036291 NAD(P)-binding domain superfamily YPO3516 IPR010097 Malate dehydrogenase, type 1 YPO3516 IPR001252 Malate dehydrogenase, active site YPO3516 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal YPO3517 IPR036388 Winged helix-like DNA-binding domain superfamily YPO3517 IPR020900 Arginine repressor, DNA-binding domain YPO3517 IPR036251 Arginine repressor, C-terminal domain superfamily YPO3517 IPR001669 Arginine repressor YPO3517 IPR020899 Arginine repressor, C-terminal YPO3517 IPR036390 Winged helix DNA-binding domain superfamily YPO3519 IPR005757 Murein peptide ligase YPO3519 IPR036615 Mur ligase, C-terminal domain superfamily YPO3519 IPR004101 Mur ligase, C-terminal YPO3519 IPR036565 Mur-like, catalytic domain superfamily YPO3519 IPR000713 Mur ligase, N-terminal catalytic domain YPO3519 IPR013221 Mur ligase, central YPO3520 IPR020548 Fructose-1,6-bisphosphatase, active site YPO3520 IPR028343 Fructose-1,6-bisphosphatase YPO3520 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal YPO3520 IPR000146 Fructose-1,6-bisphosphatase class 1 YPO3521 IPR008162 Inorganic pyrophosphatase YPO3521 IPR036649 Inorganic pyrophosphatase superfamily YPO3522 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like YPO3522 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily YPO3522 IPR013024 Gamma-glutamyl cyclotransferase-like YPO3522 IPR039126 Gamma-glutamylaminecyclotransferase YPO3523 IPR007452 Translocation and assembly module TamB YPO3524 IPR010827 POTRA domain, BamA/TamA-like YPO3524 IPR034746 POTRA domain YPO3524 IPR039910 Surface antigen D15-like YPO3524 IPR000184 Bacterial surface antigen (D15) YPO3524 IPR035243 TamA, POTRA domain 1 YPO3525 IPR002569 Peptide methionine sulphoxide reductase MsrA YPO3525 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily YPO3526 IPR005170 Transporter-associated domain YPO3526 IPR016169 FAD-binding, type PCMH, subdomain 2 YPO3526 IPR036318 FAD-binding, type PCMH-like superfamily YPO3526 IPR002550 CNNM, transmembrane domain YPO3526 IPR000644 CBS domain YPO3527 IPR009491 Protein of unknown function DUF1107 YPO3528 IPR006513 Conserved hypothetical protein CHP01626, YtfJ YPO3529 IPR000760 Inositol monophosphatase-like YPO3529 IPR020583 Inositol monophosphatase, metal-binding site YPO3529 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ YPO3529 IPR020550 Inositol monophosphatase, conserved site YPO3530 IPR029052 Metallo-dependent phosphatase-like YPO3530 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase YPO3530 IPR041827 CpdB, N-terminal metallophosphatase domain YPO3530 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type YPO3530 IPR006179 5'-Nucleotidase/apyrase YPO3530 IPR006146 5'-Nucleotidase, conserved site YPO3530 IPR008334 5'-Nucleotidase, C-terminal YPO3530 IPR036907 5'-Nucleotidase, C-terminal domain superfamily YPO3531 IPR023742 Iron-sulfur cluster repair protein YftE YPO3531 IPR012312 Haemerythrin-like YPO3531 IPR019903 Repair of iron centres family YPO3532 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain YPO3532 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal YPO3532 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily YPO3533 IPR013731 Opacity-associated protein A, N-terminal YPO3533 IPR007340 Opacity-associated protein A YPO3535 IPR002686 Transposase IS200-like YPO3535 IPR036515 Transposase IS200-like superfamily YPO3536 IPR020070 Ribosomal protein L9, N-terminal YPO3536 IPR036791 Ribosomal protein L9, C-terminal domain superfamily YPO3536 IPR020069 Ribosomal protein L9, C-terminal YPO3536 IPR020594 Ribosomal protein L9, bacteria/chloroplast YPO3536 IPR009027 Ribosomal protein L9/RNase H1, N-terminal YPO3536 IPR000244 Ribosomal protein L9 YPO3536 IPR036935 Ribosomal protein L9, N-terminal domain superfamily YPO3537 IPR036870 Ribosomal protein S18 superfamily YPO3537 IPR018275 Ribosomal protein S18, conserved site YPO3537 IPR001648 Ribosomal protein S18 YPO3538 IPR000424 Primosome PriB/single-strand DNA-binding YPO3538 IPR023646 Primosomal replication protein PriB YPO3538 IPR012340 Nucleic acid-binding, OB-fold YPO3539 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 YPO3539 IPR035980 Ribosomal protein S6 superfamily YPO3539 IPR020814 Ribosomal protein S6, plastid/chloroplast YPO3539 IPR020815 Ribosomal protein S6, conserved site YPO3539 IPR000529 Ribosomal protein S6 YPO3541 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain YPO3541 IPR029058 Alpha/Beta hydrolase fold YPO3542 IPR012337 Ribonuclease H-like superfamily YPO3542 IPR036397 Ribonuclease H superfamily YPO3542 IPR017894 HTH domain, IS21 transposase-type YPO3542 IPR001584 Integrase, catalytic core YPO3542 IPR006120 Resolvase, HTH domain YPO3543 IPR003593 AAA+ ATPase domain YPO3543 IPR002611 IstB-like ATP-binding protein YPO3543 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3543 IPR001270 ClpA/B family YPO3543 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO3544 IPR036249 Thioredoxin-like superfamily YPO3544 IPR040079 Glutathione Transferase family YPO3544 IPR010987 Glutathione S-transferase, C-terminal-like YPO3544 IPR016639 Glutathione S-transferase Omega/GSH YPO3544 IPR036282 Glutathione S-transferase, C-terminal domain superfamily YPO3544 IPR004045 Glutathione S-transferase, N-terminal YPO3545 IPR000847 Transcription regulator HTH, LysR YPO3545 IPR036390 Winged helix DNA-binding domain superfamily YPO3545 IPR005119 LysR, substrate-binding YPO3545 IPR036388 Winged helix-like DNA-binding domain superfamily YPO3546 IPR012093 Pirin YPO3546 IPR003829 Pirin, N-terminal domain YPO3546 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain YPO3546 IPR011051 RmlC-like cupin domain superfamily YPO3546 IPR014710 RmlC-like jelly roll fold YPO3547 IPR018063 SAM-dependent methyltransferase RsmI, conserved site YPO3547 IPR008189 rRNA small subunit methyltransferase I YPO3547 IPR014776 Tetrapyrrole methylase, subdomain 2 YPO3547 IPR014777 Tetrapyrrole methylase, subdomain 1 YPO3547 IPR035996 Tetrapyrrole methylase superfamily YPO3547 IPR000878 Tetrapyrrole methylase YPO3548 IPR028082 Periplasmic binding protein-like I YPO3548 IPR007443 Penicillin-binding protein activator LpoA YPO3548 IPR011990 Tetratricopeptide-like helical domain superfamily YPO3549 IPR011856 tRNA endonuclease-like domain superfamily YPO3549 IPR011335 Restriction endonuclease type II-like YPO3549 IPR003509 Uncharacterised protein family UPF0102 YPO3550 IPR001347 Sugar isomerase (SIS) YPO3550 IPR035461 GmhA/DiaA YPO3550 IPR023070 DnaA initiator-associating protein YPO3551 IPR014004 Transport-associated and nodulation domain, bacteria YPO3551 IPR007055 BON domain YPO3552 IPR011812 Biosynthetic peptidoglycan transglycosylase YPO3552 IPR036950 Penicillin binding protein transglycosylase domain YPO3552 IPR023346 Lysozyme-like domain superfamily YPO3552 IPR001264 Glycosyl transferase, family 51 YPO3553 IPR029062 Class I glutamine amidotransferase-like YPO3553 IPR026041 Glyoxalase ElbB YPO3555 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPO3555 IPR005467 Histidine kinase domain YPO3555 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPO3555 IPR040642 Histidine kinase receptor ArcB, transmembrane domain YPO3555 IPR036641 HPT domain superfamily YPO3555 IPR000014 PAS domain YPO3555 IPR013767 PAS fold YPO3555 IPR035965 PAS domain superfamily YPO3555 IPR003594 Histidine kinase/HSP90-like ATPase YPO3555 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPO3555 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain YPO3555 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB YPO3555 IPR001789 Signal transduction response regulator, receiver domain YPO3555 IPR000700 PAS-associated, C-terminal YPO3555 IPR011006 CheY-like superfamily YPO3555 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPO3555 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily YPO3556 IPR005911 Protein YhcC-like YPO3556 IPR007197 Radical SAM YPO3556 IPR006638 Elp3/MiaB/NifB YPO3556 IPR032432 Radical SAM, C-terminal extension YPO3556 IPR023404 Radical SAM, alpha/beta horseshoe YPO3556 IPR039661 ELP3/YhcC YPO3557 IPR013785 Aldolase-type TIM barrel YPO3557 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily YPO3557 IPR006982 Glutamate synthase, central-N YPO3557 IPR002932 Glutamate synthase domain YPO3557 IPR017932 Glutamine amidotransferase type 2 domain YPO3557 IPR029055 Nucleophile aminohydrolases, N-terminal YPO3557 IPR002489 Glutamate synthase, alpha subunit, C-terminal YPO3558 IPR023753 FAD/NAD(P)-binding domain YPO3558 IPR009051 Alpha-helical ferredoxin YPO3558 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 YPO3558 IPR028261 Dihydroprymidine dehydrogenase domain II YPO3558 IPR036188 FAD/NAD(P)-binding domain superfamily YPO3558 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPO3560 IPR007481 Stringent starvation protein B YPO3560 IPR036760 SspB-like superfamily YPO3561 IPR036282 Glutathione S-transferase, C-terminal domain superfamily YPO3561 IPR036249 Thioredoxin-like superfamily YPO3561 IPR034341 Stringent starvation protein A, N-terminal YPO3561 IPR040079 Glutathione Transferase family YPO3561 IPR004045 Glutathione S-transferase, N-terminal YPO3561 IPR004046 Glutathione S-transferase, C-terminal YPO3561 IPR010987 Glutathione S-transferase, C-terminal-like YPO3562 IPR020574 Ribosomal protein S9, conserved site YPO3562 IPR023035 Ribosomal protein S9, bacterial/plastid YPO3562 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPO3562 IPR000754 Ribosomal protein S9 YPO3562 IPR020568 Ribosomal protein S5 domain 2-type fold YPO3563 IPR005822 Ribosomal protein L13 YPO3563 IPR005823 Ribosomal protein L13, bacterial-type YPO3563 IPR023563 Ribosomal protein L13, conserved site YPO3563 IPR036899 Ribosomal protein L13 superfamily YPO3564 IPR030870 Cell division protein ZapE YPO3564 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3564 IPR005654 ATPase, AFG1-like YPO3565 IPR009386 Protein of unknown function DUF1043 YPO3566 IPR036034 PDZ superfamily YPO3566 IPR011782 Peptidase S1C, Do YPO3566 IPR009003 Peptidase S1, PA clan YPO3566 IPR001940 Peptidase S1C YPO3566 IPR001478 PDZ domain YPO3567 IPR002686 Transposase IS200-like YPO3567 IPR036515 Transposase IS200-like superfamily YPO3568 IPR001478 PDZ domain YPO3568 IPR036034 PDZ superfamily YPO3568 IPR011783 Peptidase S1C, DegS YPO3568 IPR009003 Peptidase S1, PA clan YPO3568 IPR001940 Peptidase S1C YPO3569 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta YPO3569 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YPO3569 IPR036968 Enolpyruvate transferase domain superfamily YPO3569 IPR001986 Enolpyruvate transferase domain YPO3570 IPR036065 BolA-like superfamily YPO3570 IPR002634 BolA protein YPO3571 IPR002645 STAS domain YPO3571 IPR036513 STAS domain superfamily YPO3572 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC YPO3572 IPR042245 Tgt2/MlaC superfamily YPO3573 IPR003399 Mce/MlaD YPO3573 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD YPO3574 IPR030802 ABC transporter permease MalE YPO3574 IPR003453 ABC transport permease subunit MlaE, Proteobacteria YPO3575 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl YPO3575 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3575 IPR017871 ABC transporter, conserved site YPO3575 IPR003439 ABC transporter-like YPO3575 IPR003593 AAA+ ATPase domain YPO3576 IPR004837 Sodium/calcium exchanger membrane region YPO3576 IPR004481 Sodium/potassium/calcium exchanger YPO3577 IPR001347 Sugar isomerase (SIS) YPO3577 IPR035474 KpsF-like, SIS domain YPO3577 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type YPO3577 IPR000644 CBS domain YPO3578 IPR010023 KdsC family YPO3578 IPR023214 HAD superfamily YPO3578 IPR036412 HAD-like superfamily YPO3579 IPR010664 Lipopolysaccharide assembly, LptC-related YPO3579 IPR026265 Lipopolysaccharide export system protein LptC YPO3580 IPR014340 Lipopolysaccharide export system protein LptA YPO3580 IPR005653 Organic solvent tolerance-like, N-terminal YPO3581 IPR030921 LPS export ABC transporter, ATP-binding protein LptB YPO3581 IPR017871 ABC transporter, conserved site YPO3581 IPR003439 ABC transporter-like YPO3581 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal YPO3581 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3581 IPR003593 AAA+ ATPase domain YPO3582 IPR007046 RNA polymerase sigma factor 54, core-binding domain YPO3582 IPR007634 RNA polymerase sigma factor 54, DNA-binding YPO3582 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily YPO3582 IPR000394 RNA polymerase sigma factor 54 YPO3585 IPR016152 Phosphotransferase/anion transporter YPO3585 IPR002178 PTS EIIA type-2 domain YPO3585 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN YPO3586 IPR005337 RapZ-like family YPO3586 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3587 IPR000032 Phosphocarrier protein HPr-like YPO3587 IPR035895 HPr-like superfamily YPO3587 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site YPO3587 IPR002114 Phosphotransferase system, HPr serine phosphorylation site YPO3588 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain YPO3588 IPR002082 Aspartate carbamoyltransferase YPO3588 IPR006130 Aspartate/ornithine carbamoyltransferase YPO3588 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding YPO3588 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily YPO3589 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily YPO3589 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal YPO3589 IPR002801 Aspartate transcarbamylase regulatory subunit YPO3589 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal YPO3589 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily YPO3590 IPR006056 RidA family YPO3590 IPR035959 RutC-like superfamily YPO3590 IPR006175 YjgF/YER057c/UK114 family YPO3590 IPR019897 RidA, conserved site YPO3591 IPR017894 HTH domain, IS21 transposase-type YPO3591 IPR001584 Integrase, catalytic core YPO3591 IPR006120 Resolvase, HTH domain YPO3591 IPR012337 Ribonuclease H-like superfamily YPO3591 IPR036397 Ribonuclease H superfamily YPO3592 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3592 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO3592 IPR001270 ClpA/B family YPO3592 IPR002611 IstB-like ATP-binding protein YPO3592 IPR003593 AAA+ ATPase domain YPO3593 IPR010272 Type VI secretion system, TssF-like YPO3597 IPR010263 Type VI secretion protein, VC_A0114 YPO3599 IPR036628 Clp, N-terminal domain superfamily YPO3599 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3599 IPR041546 ClpA/ClpB, AAA lid domain YPO3599 IPR018368 ClpA/B, conserved site 1 YPO3599 IPR001270 ClpA/B family YPO3599 IPR004176 Clp, N-terminal YPO3599 IPR019489 Clp ATPase, C-terminal YPO3599 IPR017729 Type VI secretion system, ATPase ClpV1 YPO3599 IPR003959 ATPase, AAA-type, core YPO3599 IPR003593 AAA+ ATPase domain YPO3606 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPO3606 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPO3606 IPR037026 Vgr protein, OB-fold domain superfamily YPO3606 IPR006531 Gp5 N-terminal YPO3613 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPO3613 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPO3613 IPR006531 Gp5 N-terminal YPO3613 IPR037026 Vgr protein, OB-fold domain superfamily YPO3615 IPR006530 YD repeat YPO3615 IPR031325 RHS repeat YPO3615 IPR022385 Rhs repeat-associated core YPO3615 IPR001826 RHS protein YPO3618 IPR004104 Oxidoreductase, C-terminal YPO3618 IPR036291 NAD(P)-binding domain superfamily YPO3618 IPR000683 Oxidoreductase, N-terminal YPO3619 IPR009057 Homeobox-like domain superfamily YPO3619 IPR003313 AraC-type arabinose-binding/dimerisation domain YPO3619 IPR011051 RmlC-like cupin domain superfamily YPO3619 IPR018060 DNA binding HTH domain, AraC-type YPO3619 IPR014710 RmlC-like jelly roll fold YPO3620 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU YPO3620 IPR023064 D-ribose pyranase YPO3620 IPR023750 RbsD-like superfamily YPO3621 IPR002139 Ribokinase/fructokinase YPO3621 IPR011611 Carbohydrate kinase PfkB YPO3621 IPR011877 Ribokinase YPO3621 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YPO3621 IPR029056 Ribokinase-like YPO3622 IPR028581 Deoxyribose-phosphate aldolase type I YPO3622 IPR013785 Aldolase-type TIM barrel YPO3622 IPR011343 Deoxyribose-phosphate aldolase YPO3622 IPR002915 DeoC/FbaB/ lacD aldolase YPO3623 IPR020048 NADPH-dependent FMN reductase, SsuE YPO3623 IPR005025 NADPH-dependent FMN reductase-like YPO3623 IPR029039 Flavoprotein-like superfamily YPO3624 IPR015168 SsuA/THI5-like YPO3624 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPO3624 IPR010067 Aliphatic sulfonates-binding protein YPO3625 IPR036661 Luciferase-like domain superfamily YPO3625 IPR011251 Luciferase-like domain YPO3625 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent YPO3626 IPR035906 MetI-like superfamily YPO3626 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO3627 IPR003593 AAA+ ATPase domain YPO3627 IPR003439 ABC transporter-like YPO3627 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB YPO3627 IPR017871 ABC transporter, conserved site YPO3627 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3629 IPR006043 Xanthine/uracil/vitamin C permease YPO3630 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria YPO3630 IPR006153 Cation/H+ exchanger YPO3630 IPR018422 Cation/H+ exchanger, CPA1 family YPO3630 IPR038770 Sodium/solute symporter superfamily YPO3632 IPR030857 Lipid A biosynthesis palmitoleoyltransferase, LpxP YPO3632 IPR004960 Bacterial lipid A biosynthesis acyltransferase YPO3632 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase YPO3634 IPR003593 AAA+ ATPase domain YPO3634 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3634 IPR015861 ABC transporter, ribose import, RbsA YPO3634 IPR017871 ABC transporter, conserved site YPO3634 IPR003439 ABC transporter-like YPO3635 IPR001851 ABC transporter, permease YPO3637 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPO3637 IPR005929 Ribulokinase YPO3637 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPO3637 IPR000577 Carbohydrate kinase, FGGY YPO3638 IPR001347 Sugar isomerase (SIS) YPO3638 IPR000644 CBS domain YPO3638 IPR035474 KpsF-like, SIS domain YPO3638 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type YPO3639 IPR036282 Glutathione S-transferase, C-terminal domain superfamily YPO3639 IPR040079 Glutathione Transferase family YPO3639 IPR010987 Glutathione S-transferase, C-terminal-like YPO3639 IPR036249 Thioredoxin-like superfamily YPO3639 IPR004045 Glutathione S-transferase, N-terminal YPO3642 IPR036515 Transposase IS200-like superfamily YPO3642 IPR002686 Transposase IS200-like YPO3643 IPR012340 Nucleic acid-binding, OB-fold YPO3643 IPR002059 Cold-shock protein, DNA-binding YPO3643 IPR011129 Cold shock domain YPO3643 IPR019844 Cold-shock (CSD) domain YPO3643 IPR012156 Cold shock, CspA YPO3644 IPR011129 Cold shock domain YPO3644 IPR002059 Cold-shock protein, DNA-binding YPO3644 IPR019844 Cold-shock (CSD) domain YPO3644 IPR012340 Nucleic acid-binding, OB-fold YPO3644 IPR012156 Cold shock, CspA YPO3646 IPR008816 Glycine zipper 2TM domain YPO3647 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like YPO3647 IPR001279 Metallo-beta-lactamase YPO3648 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPO3648 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain YPO3648 IPR036291 NAD(P)-binding domain superfamily YPO3648 IPR015815 3-hydroxyisobutyrate dehydrogenase-related YPO3648 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site YPO3648 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding YPO3648 IPR013328 6-phosphogluconate dehydrogenase, domain 2 YPO3649 IPR012788 4-carboxymuconolactone decarboxylase YPO3649 IPR003779 Carboxymuconolactone decarboxylase-like YPO3649 IPR029032 AhpD-like YPO3650 IPR020846 Major facilitator superfamily domain YPO3650 IPR036259 MFS transporter superfamily YPO3650 IPR004736 MFS transporter, metabolite:H symporter YPO3650 IPR005829 Sugar transporter, conserved site YPO3650 IPR011701 Major facilitator superfamily YPO3654 IPR005412 DNA-binding protein Fis YPO3654 IPR002197 DNA binding HTH domain, Fis-type YPO3654 IPR009057 Homeobox-like domain superfamily YPO3655 IPR018517 tRNA-dihydrouridine synthase, conserved site YPO3655 IPR001269 tRNA-dihydrouridine synthase YPO3655 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 YPO3655 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal YPO3655 IPR032887 tRNA-dihydrouridine synthase B YPO3655 IPR035587 DUS-like, FMN-binding domain YPO3655 IPR013785 Aldolase-type TIM barrel YPO3656 IPR004498 Ribosomal protein L11 methyltransferase YPO3656 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO3657 IPR018212 Sodium/solute symporter, conserved site YPO3657 IPR001734 Sodium/solute symporter YPO3657 IPR038377 Sodium/glucose symporter superfamily YPO3657 IPR011849 Sodium/pantothenate symporter YPO3657a IPR010398 Protein of unknown function DUF997 YPO3658 IPR005482 Biotin carboxylase, C-terminal YPO3658 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain YPO3658 IPR013815 ATP-grasp fold, subdomain 1 YPO3658 IPR016185 Pre-ATP-grasp domain superfamily YPO3658 IPR011054 Rudiment single hybrid motif YPO3658 IPR005481 Biotin carboxylase-like, N-terminal domain YPO3658 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase YPO3658 IPR011761 ATP-grasp fold YPO3658 IPR011764 Biotin carboxylation domain YPO3659 IPR001882 Biotin-binding site YPO3659 IPR000089 Biotin/lipoyl attachment YPO3659 IPR001249 Acetyl-CoA biotin carboxyl carrier YPO3659 IPR011053 Single hybrid motif YPO3660 IPR036441 Dehydroquinase, class II superfamily YPO3660 IPR018509 Dehydroquinase, class II, conserved site YPO3660 IPR001874 Dehydroquinase, class II YPO3661 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ YPO3661 IPR013130 Ferric reductase transmembrane component-like domain YPO3662 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP YPO3662 IPR000572 Oxidoreductase, molybdopterin-binding domain YPO3662 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily YPO3663 IPR011032 GroES-like superfamily YPO3663 IPR036291 NAD(P)-binding domain superfamily YPO3663 IPR020843 Polyketide synthase, enoylreductase domain YPO3663 IPR014188 Acrylyl-CoA reductase AcuI YPO3663 IPR013154 Alcohol dehydrogenase, N-terminal YPO3663 IPR013149 Alcohol dehydrogenase, C-terminal YPO3664 IPR001633 EAL domain YPO3664 IPR029787 Nucleotide cyclase YPO3664 IPR035919 EAL domain superfamily YPO3664 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 YPO3664 IPR000160 GGDEF domain YPO3665 IPR004753 Cell shape determining protein MreB YPO3666 IPR007221 Rod shape-determining protein MreC YPO3666 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 YPO3666 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 YPO3667 IPR007227 Cell shape-determining protein MreD YPO3667 IPR026034 Cell shape-determining protein MreD, proteobacterial type YPO3668 IPR029001 Inosine triphosphate pyrophosphatase-like YPO3668 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein YPO3669 IPR003029 S1 domain YPO3669 IPR012340 Nucleic acid-binding, OB-fold YPO3669 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G YPO3669 IPR004659 Ribonuclease E/G YPO3669 IPR022967 RNA-binding domain, S1 YPO3670 IPR025263 Domain of unknown function DUF3971 YPO3670 IPR011836 Conserved hypothetical protein CHP02099 YPO3670 IPR032712 AsmA-like, C-terminal YPO3671 IPR036526 Carbon-nitrogen hydrolase superfamily YPO3671 IPR003010 Carbon-nitrogen hydrolase YPO3671 IPR001110 Uncharacterised protein family UPF0012, conserved site YPO3672 IPR036059 Metalloprotease TldD/PmbA superfamily YPO3672 IPR025502 TldD YPO3672 IPR035068 Metalloprotease TldD/PmbA, N-terminal YPO3672 IPR002510 Metalloprotease TldD/PmbA YPO3673 IPR025968 YwqJ-like deaminase YPO3673 IPR022385 Rhs repeat-associated core YPO3673 IPR041508 Toxin complex C-like repeat YPO3674 IPR041508 Toxin complex C-like repeat YPO3674 IPR022385 Rhs repeat-associated core YPO3674 IPR008430 Cytotoxic necrotizing factor, Rho-activating domain YPO3674 IPR011324 Cytotoxic necrotizing factor-like, catalytic YPO3674 IPR037040 Cytotoxic necrotizing factor, Rho-activating domain superfamily YPO3678 IPR003284 Salmonella virulence plasmid 65kDa B protein YPO3678 IPR022044 Insecticide toxin TcdB middle/C-terminal YPO3678 IPR022045 Insecticide toxin TcdB middle/N-terminal YPO3682 IPR036390 Winged helix DNA-binding domain superfamily YPO3682 IPR005119 LysR, substrate-binding YPO3682 IPR000847 Transcription regulator HTH, LysR YPO3682 IPR036388 Winged helix-like DNA-binding domain superfamily YPO3683 IPR000847 Transcription regulator HTH, LysR YPO3683 IPR005119 LysR, substrate-binding YPO3683 IPR036388 Winged helix-like DNA-binding domain superfamily YPO3683 IPR036390 Winged helix DNA-binding domain superfamily YPO3684 IPR012451 Protein of unknown function DUF1656 YPO3685 IPR039562 Membrane fusion protein, biotin-lipoyl like domain YPO3685 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA YPO3685 IPR006143 RND efflux pump, membrane fusion protein YPO3686 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein YPO3686 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB YPO3690 IPR035905 Barstar-like superfamily YPO3690 IPR000468 Barstar (barnase inhibitor) YPO3691 IPR023153 PSPTO4464-like domain superfamily YPO3691 IPR006839 Ribosome-associated, YjgA YPO3692 IPR002510 Metalloprotease TldD/PmbA YPO3692 IPR035068 Metalloprotease TldD/PmbA, N-terminal YPO3692 IPR036059 Metalloprotease TldD/PmbA superfamily YPO3694 IPR010980 Cytochrome c/b562 YPO3694 IPR009155 Cytochrome b562 YPO3695 IPR023459 Transcription elongation factor GreA/GreB family YPO3695 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal YPO3695 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily YPO3695 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain YPO3695 IPR028625 Regulator of nucleoside diphosphate kinase YPO3696 IPR017853 Glycoside hydrolase superfamily YPO3696 IPR013780 Glycosyl hydrolase, all-beta YPO3696 IPR006047 Glycosyl hydrolase, family 13, catalytic domain YPO3696 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) YPO3696 IPR012769 Trehalose-6-phosphate hydrolase YPO3697 IPR013013 Phosphotransferase system, EIIC component, type 1 YPO3697 IPR001996 Phosphotransferase system, IIB component, type 1 YPO3697 IPR011296 Phosphotransferase system, trehalose-specific IIBC component YPO3697 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component YPO3697 IPR036878 Glucose permease domain IIB YPO3697 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site YPO3697 IPR003352 Phosphotransferase system, EIIC YPO3698 IPR012771 Trehalose operon repressor YPO3698 IPR000843 LacI-type HTH domain YPO3698 IPR028082 Periplasmic binding protein-like I YPO3698 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPO3700 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO3700 IPR003593 AAA+ ATPase domain YPO3700 IPR001270 ClpA/B family YPO3700 IPR002611 IstB-like ATP-binding protein YPO3700 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3701 IPR017894 HTH domain, IS21 transposase-type YPO3701 IPR036397 Ribonuclease H superfamily YPO3701 IPR012337 Ribonuclease H-like superfamily YPO3701 IPR006120 Resolvase, HTH domain YPO3701 IPR001584 Integrase, catalytic core YPO3703 IPR001584 Integrase, catalytic core YPO3703 IPR012337 Ribonuclease H-like superfamily YPO3703 IPR036397 Ribonuclease H superfamily YPO3703 IPR038965 Transposase InsF-like YPO3703 IPR025948 HTH-like domain YPO3704 IPR010272 Type VI secretion system, TssF-like YPO3706 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath YPO3708 IPR008514 Type VI secretion system effector, Hcp YPO3708 IPR036624 Hcp1-like superfamily YPO3710 IPR010794 Maltose operon periplasmic YPO3711 IPR023738 Maltoporin YPO3711 IPR003192 Porin, LamB-type YPO3711 IPR036998 Porin, LamB-type superfamily YPO3712 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3712 IPR040582 MalK, OB fold domain YPO3712 IPR008995 Molybdate/tungstate binding, C-terminal YPO3712 IPR015855 ABC transporter, maltose/maltodextrin import, MalK YPO3712 IPR017871 ABC transporter, conserved site YPO3712 IPR003593 AAA+ ATPase domain YPO3712 IPR003439 ABC transporter-like YPO3714 IPR006061 Solute-binding family 1, conserved site YPO3714 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein YPO3714 IPR006059 Bacterial extracellular solute-binding protein YPO3715 IPR030156 Maltose/maltodextrin transport system permease protein MalF-like YPO3715 IPR035906 MetI-like superfamily YPO3715 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO3715 IPR029345 Maltose transport system permease protein MalF, P2 domain YPO3715 IPR035277 MalF, N-terminal YPO3716 IPR035906 MetI-like superfamily YPO3716 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO3717 IPR009315 Phosphate-starvation-induced PsiE YPO3717 IPR020948 Phosphate-starvation-induced PsiE-like YPO3718 IPR035482 Phosphoglucose isomerase, SIS domain 2 YPO3718 IPR035476 Phosphoglucose isomerase, SIS domain 1 YPO3718 IPR018189 Phosphoglucose isomerase, conserved site YPO3718 IPR023096 Phosphoglucose isomerase, C-terminal YPO3718 IPR001672 Phosphoglucose isomerase (PGI) YPO3719 IPR001341 Aspartate kinase YPO3719 IPR001048 Aspartate/glutamate/uridylate kinase YPO3719 IPR002912 ACT domain YPO3719 IPR041745 Lysine-sensitive aspartokinase 3, N-terminal catalytic domain YPO3719 IPR036393 Acetylglutamate kinase-like superfamily YPO3719 IPR018042 Aspartate kinase, conserved site YPO3719 IPR005260 Aspartate kinase, monofunctional class YPO3720 IPR005565 Haemolysin activator HlyB, C-terminal YPO3720 IPR013686 Polypeptide-transport-associated, ShlB-type YPO3720 IPR034746 POTRA domain YPO3720 IPR035251 ShlB, POTRA domain YPO3720 IPR027282 Two partner secretion pathway transporter YPO3721 IPR012334 Pectin lyase fold YPO3721 IPR011050 Pectin lyase fold/virulence factor YPO3721 IPR008638 Filamentous haemagglutinin, N-terminal YPO3721 IPR025157 Hemagglutinin repeat YPO3722 IPR036589 Homocysteine-binding domain superfamily YPO3722 IPR033706 Methionine synthase, B12-binding domain YPO3722 IPR011822 Cobalamin-dependent methionine synthase YPO3722 IPR003726 Homocysteine-binding domain YPO3722 IPR011005 Dihydropteroate synthase-like YPO3722 IPR036594 Methionine synthase domain YPO3722 IPR000489 Pterin-binding domain YPO3722 IPR004223 Vitamin B12-dependent methionine synthase, activation domain YPO3722 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily YPO3722 IPR036724 Cobalamin-binding domain superfamily YPO3722 IPR006158 Cobalamin (vitamin B12)-binding domain YPO3722 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain YPO3724 IPR010452 Isocitrate dehydrogenase kinasephosphatase YPO3725 IPR040442 Pyruvate kinase-like domain superfamily YPO3725 IPR039556 ICL/PEPM domain YPO3725 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site YPO3725 IPR006254 Isocitrate lyase YPO3725 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily YPO3726 IPR019830 Malate synthase, conserved site YPO3726 IPR001465 Malate synthase YPO3726 IPR006252 Malate synthase A YPO3726 IPR011076 Malate synthase-like superfamily YPO3727 IPR033752 MetA family YPO3727 IPR005697 Homoserine O-succinyltransferase MetA YPO3727 IPR029062 Class I glutamine amidotransferase-like YPO3728 IPR016193 Cytidine deaminase-like YPO3728 IPR002695 Bifunctional purine biosynthesis protein PurH-like YPO3728 IPR036914 Methylglyoxal synthase-like domain superfamily YPO3728 IPR011607 Methylglyoxal synthase-like domain YPO3728 IPR024051 AICAR transformylase, duplicated domain superfamily YPO3729 IPR011761 ATP-grasp fold YPO3729 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily YPO3729 IPR020559 Phosphoribosylglycinamide synthetase, conserved site YPO3729 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal YPO3729 IPR011054 Rudiment single hybrid motif YPO3729 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain YPO3729 IPR016185 Pre-ATP-grasp domain superfamily YPO3729 IPR013815 ATP-grasp fold, subdomain 1 YPO3729 IPR000115 Phosphoribosylglycinamide synthetase YPO3729 IPR020560 Phosphoribosylglycinamide synthetase, C-domain YPO3730 IPR010858 Protein of unknown function DUF1481 YPO3730 IPR016500 Uncharacterised conserved protein UCP006993 YPO3731 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily YPO3731 IPR020816 Histone-like DNA-binding protein, conserved site YPO3731 IPR000119 Histone-like DNA-binding protein YPO3732 IPR007338 Protein of unknown function DUF416 YPO3732 IPR023381 YP001051499.1-like domain superfamily YPO3733 IPR007581 Endonuclease V YPO3734 IPR006361 Uroporphyrinogen decarboxylase HemE YPO3734 IPR000257 Uroporphyrinogen decarboxylase (URO-D) YPO3734 IPR038071 UROD/MetE-like superfamily YPO3736 IPR022925 NADH pyrophosphatase NudC YPO3736 IPR020084 NUDIX hydrolase, conserved site YPO3736 IPR000086 NUDIX hydrolase domain YPO3736 IPR015376 Zinc ribbon, NADH pyrophosphatase YPO3736 IPR015797 NUDIX hydrolase-like domain superfamily YPO3737 IPR038309 Rsd/AlgQ superfamily YPO3737 IPR023785 Regulator of RNA polymerase sigma(70) subunit, Rsd YPO3737 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ YPO3739 IPR037509 Phosphomethylpyrimidine synthase YPO3739 IPR025747 ThiC-associated domain YPO3739 IPR038521 ThiC/Bza superfamily YPO3739 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B YPO3740 IPR013785 Aldolase-type TIM barrel YPO3740 IPR036206 Thiamin phosphate synthase superfamily YPO3740 IPR022998 Thiamine phosphate synthase/TenI YPO3740 IPR034291 Thiamine phosphate synthase YPO3741 IPR000594 THIF-type NAD/FAD binding fold YPO3741 IPR012731 Thiazole biosynthesis adenylyltransferase ThiF YPO3741 IPR035985 Ubiquitin-activating enzyme YPO3742 IPR013785 Aldolase-type TIM barrel YPO3742 IPR033983 Thiazole synthase ThiG YPO3742 IPR008867 Thiazole synthase YPO3743 IPR034428 ThiH/NocL/HydG-like YPO3743 IPR013785 Aldolase-type TIM barrel YPO3743 IPR010722 Biotin and thiamin synthesis-associated domain YPO3743 IPR007197 Radical SAM YPO3743 IPR012726 Thiazole biosynthesis ThiH YPO3745 IPR036515 Transposase IS200-like superfamily YPO3745 IPR002686 Transposase IS200-like YPO3746 IPR007080 RNA polymerase Rpb1, domain 1 YPO3746 IPR000722 RNA polymerase, alpha subunit YPO3746 IPR012754 DNA-directed RNA polymerase, subunit beta-prime YPO3746 IPR007066 RNA polymerase Rpb1, domain 3 YPO3746 IPR006592 RNA polymerase, N-terminal YPO3746 IPR007083 RNA polymerase Rpb1, domain 4 YPO3746 IPR042102 RNA polymerase Rpb1, domain 3 superfamily YPO3746 IPR007081 RNA polymerase Rpb1, domain 5 YPO3746 IPR038120 RNA polymerase Rpb1, funnel domain superfamily YPO3747 IPR007642 RNA polymerase Rpb2, domain 2 YPO3747 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain YPO3747 IPR015712 DNA-directed RNA polymerase, subunit 2 YPO3747 IPR014724 RNA polymerase Rpb2, OB-fold YPO3747 IPR007641 RNA polymerase Rpb2, domain 7 YPO3747 IPR007645 RNA polymerase Rpb2, domain 3 YPO3747 IPR037034 RNA polymerase Rpb2, domain 2 superfamily YPO3747 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain YPO3747 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily YPO3747 IPR007644 RNA polymerase, beta subunit, protrusion YPO3747 IPR007121 RNA polymerase, beta subunit, conserved site YPO3747 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type YPO3748 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily YPO3748 IPR008932 Ribosomal protein L7/L12, oligomerisation YPO3748 IPR013823 Ribosomal protein L7/L12, C-terminal YPO3748 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like YPO3748 IPR000206 Ribosomal protein L7/L12 YPO3749 IPR022973 Ribosomal protein L10 YPO3749 IPR001790 Ribosomal protein L10P YPO3749 IPR002363 Ribosomal protein L10, eubacterial, conserved site YPO3750 IPR002143 Ribosomal protein L1 YPO3750 IPR005878 Ribosomal protein L1, bacterial-type YPO3750 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein YPO3750 IPR023673 Ribosomal protein L1, conserved site YPO3750 IPR023674 Ribosomal protein L1-like YPO3750 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich YPO3751 IPR020783 Ribosomal protein L11, C-terminal YPO3751 IPR000911 Ribosomal protein L11/L12 YPO3751 IPR020784 Ribosomal protein L11, N-terminal YPO3751 IPR006519 Ribosomal protein L11, bacterial-type YPO3751 IPR020785 Ribosomal protein L11, conserved site YPO3751 IPR036769 Ribosomal protein L11, C-terminal domain superfamily YPO3751 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily YPO3752 IPR005824 KOW YPO3752 IPR006645 NusG, N-terminal YPO3752 IPR036735 NusG, N-terminal domain superfamily YPO3752 IPR014722 Ribosomal protein L2, domain 2 YPO3752 IPR001062 Transcription antitermination protein, NusG YPO3752 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site YPO3752 IPR008991 Translation protein SH3-like domain superfamily YPO3753 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit YPO3753 IPR038379 SecE superfamily YPO3753 IPR005807 SecE subunit of protein translocation complex, bacterial-like YPO3754 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain YPO3754 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal YPO3754 IPR004161 Translation elongation factor EFTu-like, domain 2 YPO3754 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle YPO3754 IPR033720 Elongation factor Tu, domain 2 YPO3754 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal YPO3754 IPR009000 Translation protein, beta-barrel domain superfamily YPO3754 IPR000795 Transcription factor, GTP-binding domain YPO3754 IPR005225 Small GTP-binding protein domain YPO3754 IPR031157 Tr-type G domain, conserved site YPO3754 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3755 IPR003593 AAA+ ATPase domain YPO3755 IPR001270 ClpA/B family YPO3755 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO3755 IPR002611 IstB-like ATP-binding protein YPO3755 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3756 IPR036397 Ribonuclease H superfamily YPO3756 IPR012337 Ribonuclease H-like superfamily YPO3756 IPR006120 Resolvase, HTH domain YPO3756 IPR001584 Integrase, catalytic core YPO3756 IPR017894 HTH domain, IS21 transposase-type YPO3757 IPR016181 Acyl-CoA N-acyltransferase YPO3757 IPR000182 GNAT domain YPO3758 IPR006083 Phosphoribulokinase/uridine kinase YPO3758 IPR004566 Pantothenate kinase YPO3758 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3759 IPR036388 Winged helix-like DNA-binding domain superfamily YPO3759 IPR030855 Bifunctional ligase/repressor BirA YPO3759 IPR003142 Biotin protein ligase, C-terminal YPO3759 IPR004408 Biotin--acetyl-CoA-carboxylase ligase YPO3759 IPR008988 Transcriptional repressor, C-terminal YPO3759 IPR013196 Helix-turn-helix, type 11 YPO3759 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain YPO3759 IPR004409 Biotin operon repressor, helix-turn-helix domain YPO3759 IPR036390 Winged helix DNA-binding domain superfamily YPO3760 IPR006094 FAD linked oxidase, N-terminal YPO3760 IPR016167 FAD-binding, type PCMH, subdomain 1 YPO3760 IPR016166 FAD-binding domain, PCMH-type YPO3760 IPR036318 FAD-binding, type PCMH-like superfamily YPO3760 IPR016169 FAD-binding, type PCMH, subdomain 2 YPO3760 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily YPO3760 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase YPO3760 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal YPO3761 IPR029039 Flavoprotein-like superfamily YPO3761 IPR026816 Flavodoxin domain YPO3761 IPR001226 Flavodoxin, conserved site YPO3761 IPR008254 Flavodoxin/nitric oxide synthase YPO3762 IPR003445 Cation transporter YPO3762 IPR004772 TrkH potassium transport family YPO3764 IPR002686 Transposase IS200-like YPO3764 IPR036515 Transposase IS200-like superfamily YPO3764a IPR036956 Impact, N-terminal domain superfamily YPO3764a IPR001498 Impact, N-terminal YPO3764a IPR023582 Impact family YPO3764a IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal YPO3764a IPR020568 Ribosomal protein S5 domain 2-type fold YPO3764a IPR035647 EF-G domain III/V-like YPO3764a IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site YPO3764a IPR015796 Impact family, bacterial/archaeal YPO3765 IPR036005 Creatinase/aminopeptidase-like YPO3765 IPR000994 Peptidase M24 YPO3765 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal YPO3765 IPR022846 Xaa-Pro dipeptidase YPO3765 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site YPO3766 IPR001753 Enoyl-CoA hydratase/isomerase YPO3766 IPR012799 Fatty oxidation complex, alpha subunit FadB YPO3766 IPR036291 NAD(P)-binding domain superfamily YPO3766 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPO3766 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site YPO3766 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site YPO3766 IPR029045 ClpP/crotonase-like domain superfamily YPO3766 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal YPO3766 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding YPO3767 IPR020617 Thiolase, C-terminal YPO3767 IPR020610 Thiolase, active site YPO3767 IPR020613 Thiolase, conserved site YPO3767 IPR020615 Thiolase, acyl-enzyme intermediate active site YPO3767 IPR012805 Acetyl-CoA C-acyltransferase FadA YPO3767 IPR002155 Thiolase YPO3767 IPR016039 Thiolase-like YPO3767 IPR020616 Thiolase, N-terminal YPO3768 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain YPO3768 IPR017938 Riboflavin synthase-like beta-barrel YPO3768 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain YPO3768 IPR017927 FAD-binding domain, ferredoxin reductase-type YPO3768 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPO3769 IPR023677 UbiD decarboxylyase, bacteria YPO3769 IPR002830 UbiD decarboxylyase family YPO3770 IPR036735 NusG, N-terminal domain superfamily YPO3770 IPR006645 NusG, N-terminal YPO3770 IPR010215 Transcription antitermination protein RfaH YPO3771 IPR001731 Delta-aminolevulinic acid dehydratase YPO3771 IPR013785 Aldolase-type TIM barrel YPO3771 IPR030656 Delta-aminolevulinic acid dehydratase, active site YPO3773 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3773 IPR003593 AAA+ ATPase domain YPO3773 IPR001270 ClpA/B family YPO3773 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO3773 IPR002611 IstB-like ATP-binding protein YPO3774 IPR036397 Ribonuclease H superfamily YPO3774 IPR012337 Ribonuclease H-like superfamily YPO3774 IPR006120 Resolvase, HTH domain YPO3774 IPR001584 Integrase, catalytic core YPO3774 IPR017894 HTH domain, IS21 transposase-type YPO3776 IPR019820 Sec-independent periplasmic protein translocase, conserved site YPO3776 IPR002033 Sec-independent periplasmic protein translocase TatC YPO3777 IPR018448 Twin-arginine translocation protein TatB YPO3778 IPR003369 Sec-independent protein translocase protein TatA/B/E YPO3778 IPR006312 Sec-independent protein translocase protein TatA/E YPO3779 IPR011009 Protein kinase-like domain superfamily YPO3779 IPR010232 Probable protein kinase UbiB YPO3779 IPR004147 UbiB domain YPO3780 IPR003033 SCP2 sterol-binding domain YPO3780 IPR036527 SCP2 sterol-binding domain superfamily YPO3780 IPR038989 Ubiquinone biosynthesis protein UbiJ YPO3781 IPR023576 UbiE/COQ5 methyltransferase, conserved site YPO3781 IPR004033 UbiE/COQ5 methyltransferase YPO3781 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO3782 IPR003798 DNA recombination RmuC YPO3783 IPR032816 SNARE associated Golgi protein YPO3783 IPR032818 DedA family YPO3784 IPR025299 CstA, C-terminal domain YPO3784 IPR003706 CstA, N-terminal domain YPO3786 IPR018016 Nucleoside phosphorylase, conserved site YPO3786 IPR035994 Nucleoside phosphorylase superfamily YPO3786 IPR000845 Nucleoside phosphorylase domain YPO3786 IPR010058 Uridine phosphorylase YPO3787 IPR029058 Alpha/Beta hydrolase fold YPO3787 IPR002925 Dienelactone hydrolase YPO3788 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal YPO3788 IPR006276 Cobalamin-independent methionine synthase YPO3788 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal YPO3788 IPR038071 UROD/MetE-like superfamily YPO3789 IPR037406 HTH-type transcriptional regulator MetR, PBP2 domain YPO3789 IPR000847 Transcription regulator HTH, LysR YPO3789 IPR036388 Winged helix-like DNA-binding domain superfamily YPO3789 IPR036390 Winged helix DNA-binding domain superfamily YPO3789 IPR005119 LysR, substrate-binding YPO3790 IPR004779 Carboxylate/Amino Acid/Amine Transporter YPO3790 IPR000620 EamA domain YPO3791 IPR004776 Membrane transport protein YPO3792 IPR030395 Glycerophosphodiester phosphodiesterase domain YPO3792 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily YPO3793 IPR017922 sn-Glycerol-3-phosphate import ATP-binding protein UgpC YPO3793 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3793 IPR040582 MalK, OB fold domain YPO3793 IPR003593 AAA+ ATPase domain YPO3793 IPR003439 ABC transporter-like YPO3793 IPR017871 ABC transporter, conserved site YPO3793 IPR008995 Molybdate/tungstate binding, C-terminal YPO3794 IPR030165 sn-Glycerol-3-phosphate transport system permease protein UgpE YPO3794 IPR035906 MetI-like superfamily YPO3794 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO3795 IPR035906 MetI-like superfamily YPO3795 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO3796 IPR006059 Bacterial extracellular solute-binding protein YPO3796 IPR006061 Solute-binding family 1, conserved site YPO3804 IPR003593 AAA+ ATPase domain YPO3804 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3804 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein YPO3804 IPR003439 ABC transporter-like YPO3804 IPR017871 ABC transporter, conserved site YPO3805 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3805 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal YPO3805 IPR017871 ABC transporter, conserved site YPO3805 IPR003593 AAA+ ATPase domain YPO3805 IPR003439 ABC transporter-like YPO3806 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal YPO3806 IPR001851 ABC transporter, permease YPO3807 IPR001851 ABC transporter, permease YPO3808 IPR028082 Periplasmic binding protein-like I YPO3808 IPR000709 Leu/Ile/Val-binding protein YPO3808 IPR028081 Leucine-binding protein domain YPO3809 IPR016181 Acyl-CoA N-acyltransferase YPO3809 IPR000182 GNAT domain YPO3809 IPR040448 PanZ, acetyltransferase (GNAT) domain YPO3809 IPR032900 PanD regulatory factor PanZ YPO3810 IPR036515 Transposase IS200-like superfamily YPO3810 IPR002686 Transposase IS200-like YPO3811 IPR036388 Winged helix-like DNA-binding domain superfamily YPO3811 IPR013324 RNA polymerase sigma factor, region 3/4-like YPO3811 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria YPO3811 IPR007630 RNA polymerase sigma-70 region 4 YPO3811 IPR007627 RNA polymerase sigma-70 region 2 YPO3811 IPR009042 RNA polymerase sigma-70 region 1.2 YPO3811 IPR000943 RNA polymerase sigma-70 YPO3811 IPR014284 RNA polymerase sigma-70 like domain YPO3811 IPR013325 RNA polymerase sigma factor, region 2 YPO3812 IPR040690 FtsX, extracellular domain YPO3812 IPR004513 Cell division protein FtsX YPO3812 IPR003838 ABC transporter permease protein domain YPO3813 IPR003593 AAA+ ATPase domain YPO3813 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3813 IPR017871 ABC transporter, conserved site YPO3813 IPR003439 ABC transporter-like YPO3813 IPR005286 Cell division protein FtsE, ATP-binding YPO3814 IPR013822 Signal recognition particle SRP54, helical bundle YPO3814 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain YPO3814 IPR036225 SRP/SRP receptor, N-terminal YPO3814 IPR004390 Signal-recognition particle receptor FtsY YPO3814 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily YPO3814 IPR003593 AAA+ ATPase domain YPO3814 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3814 IPR003593 AAA+ ATPase domain YPO3814 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily YPO3814 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain YPO3814 IPR036225 SRP/SRP receptor, N-terminal YPO3814 IPR004390 Signal-recognition particle receptor FtsY YPO3814 IPR013822 Signal recognition particle SRP54, helical bundle YPO3814 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3816 IPR004398 RNA methyltransferase, RsmD YPO3816 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO3816 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPO3816a IPR009525 Protein of unknown function DUF1145 YPO3819 IPR012506 YhhN-like YPO3820 IPR017969 Heavy-metal-associated, conserved site YPO3820 IPR018303 P-type ATPase, phosphorylation site YPO3820 IPR006121 Heavy metal-associated domain, HMA YPO3820 IPR023298 P-type ATPase, transmembrane domain superfamily YPO3820 IPR008250 P-type ATPase, A domain superfamily YPO3820 IPR001757 P-type ATPase YPO3820 IPR027256 P-type ATPase, subfamily IB YPO3820 IPR036163 Heavy metal-associated domain superfamily YPO3820 IPR023299 P-type ATPase, cytoplasmic domain N YPO3820 IPR036412 HAD-like superfamily YPO3820 IPR023214 HAD superfamily YPO3821 IPR036868 TusA-like domain superfamily YPO3821 IPR001455 TusA-like domain YPO3821 IPR022931 Sulfur carrier protein TusA YPO3822 IPR003744 Queuosine precursor transporter YPO3823 IPR014894 Protein DcrB YPO3823 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich YPO3824 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO3824 IPR004017 Cysteine-rich domain YPO3824 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit YPO3824 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPO3824 IPR009051 Alpha-helical ferredoxin YPO3825 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit YPO3825 IPR036188 FAD/NAD(P)-binding domain superfamily YPO3825 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain YPO3826 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase YPO3826 IPR006076 FAD dependent oxidoreductase YPO3826 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily YPO3826 IPR007419 BFD-like [2Fe-2S]-binding domain YPO3826 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit YPO3826 IPR036188 FAD/NAD(P)-binding domain superfamily YPO3827 IPR030395 Glycerophosphodiester phosphodiesterase domain YPO3827 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily YPO3829 IPR000150 Cof family YPO3829 IPR036412 HAD-like superfamily YPO3829 IPR006379 HAD-superfamily hydrolase, subfamily IIB YPO3829 IPR023214 HAD superfamily YPO3830 IPR022742 Serine aminopeptidase, S33 YPO3830 IPR029058 Alpha/Beta hydrolase fold YPO3831 IPR004778 Homoserine/Threonine efflux protein YPO3831 IPR001123 Amino acid exporter protein, LeuE-type YPO3832 IPR001123 Amino acid exporter protein, LeuE-type YPO3832 IPR004778 Homoserine/Threonine efflux protein YPO3833 IPR036388 Winged helix-like DNA-binding domain superfamily YPO3833 IPR002121 HRDC domain YPO3833 IPR010997 HRDC-like superfamily YPO3833 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain YPO3833 IPR001650 Helicase, C-terminal YPO3833 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPO3833 IPR018982 RQC domain YPO3833 IPR011545 DEAD/DEAH box helicase domain YPO3833 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial YPO3833 IPR004589 DNA helicase, ATP-dependent, RecQ type YPO3833 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3834 IPR036541 Phospholipase A1 superfamily YPO3834 IPR003187 Phospholipase A1 YPO3835 IPR003736 Phenylacetic acid degradation-related domain YPO3835 IPR006683 Thioesterase domain YPO3835 IPR029069 HotDog domain superfamily YPO3836 IPR000620 EamA domain YPO3836 IPR004626 RarD protein YPO3837 IPR004488 Magnesium/cobalt transport protein CorA YPO3837 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB YPO3838 IPR013785 Aldolase-type TIM barrel YPO3838 IPR009215 TIM-barrel domain, IGPS-like YPO3838 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily YPO3839 IPR008322 Uncharacterised protein family UPF0261 YPO3841 IPR014017 UvrD-like DNA helicase, C-terminal YPO3841 IPR000212 DNA helicase, UvrD/REP type YPO3841 IPR013986 DExx box DNA helicase domain superfamily YPO3841 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3841 IPR014016 UvrD-like helicase, ATP-binding domain YPO3841 IPR034739 UvrD/AddA helicase, N-terminal YPO3841 IPR005753 DNA helicase, ATP-dependent, UvrD type YPO3842 IPR036412 HAD-like superfamily YPO3842 IPR006439 HAD hydrolase, subfamily IA YPO3842 IPR041492 Haloacid dehalogenase-like hydrolase YPO3842 IPR023214 HAD superfamily YPO3843 IPR023009 Tyrosine recombinase XerC/XerD YPO3843 IPR011931 Tyrosine recombinase XerC YPO3843 IPR004107 Integrase, SAM-like, N-terminal YPO3843 IPR010998 Integrase/recombinase, N-terminal YPO3843 IPR002104 Integrase, catalytic domain YPO3843 IPR013762 Integrase-like, catalytic domain superfamily YPO3843 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPO3844 IPR007435 Protein of unknown function DUF484 YPO3844 IPR029016 GAF-like domain superfamily YPO3845 IPR001653 Diaminopimelate epimerase, DapF YPO3845 IPR018510 Diaminopimelate epimerase, active site YPO3846 IPR032831 Prokaryotic lipoprotein-attachment site YPO3847 IPR002908 Frataxin/CyaY YPO3847 IPR036524 Frataxin/CyaY superfamily YPO3847 IPR020895 Frataxin conserved site YPO3848 IPR024685 Adenylate cyclase class-I, N-terminal domain YPO3848 IPR024686 Adenylate cyclase class-I, conserved site YPO3848 IPR000274 Adenylate cyclase, class-I YPO3849 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily YPO3849 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site YPO3849 IPR022417 Porphobilinogen deaminase, N-terminal YPO3849 IPR000860 Porphobilinogen deaminase YPO3849 IPR022418 Porphobilinogen deaminase, C-terminal YPO3850 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily YPO3850 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase YPO3850 IPR039793 Uroporphyrinogen-III synthase YPO3851 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX YPO3852 IPR013026 Tetratricopeptide repeat-containing domain YPO3852 IPR019734 Tetratricopeptide repeat YPO3852 IPR013105 Tetratricopeptide repeat 2 YPO3852 IPR011990 Tetratricopeptide-like helical domain superfamily YPO3852 IPR005254 Heme biosynthesis-associated TPR protein YPO3852 IPR010817 HemY, N-terminal YPO3853 IPR036515 Transposase IS200-like superfamily YPO3853 IPR002686 Transposase IS200-like YPO3854 IPR004840 Amino acid permease, conserved site YPO3854 IPR004841 Amino acid permease/ SLC12A domain YPO3855 IPR004629 Glycosyl transferase WecB/TagA/CpsF YPO3855 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase YPO3856 IPR010691 Probable ECA polymerase WzyE YPO3857 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase YPO3858 IPR032896 Lipid III flippase WzxE YPO3858 IPR002797 Polysaccharide biosynthesis protein YPO3859 IPR032894 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE YPO3859 IPR012749 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE-like YPO3859 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPO3859 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 YPO3859 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase YPO3859 IPR015424 Pyridoxal phosphate-dependent transferase YPO3860 IPR016181 Acyl-CoA N-acyltransferase YPO3860 IPR002110 Ankyrin repeat YPO3860 IPR020683 Ankyrin repeat-containing domain YPO3860 IPR000182 GNAT domain YPO3860 IPR012752 dTDP-fucosamine acetyltransferase WecD YPO3861 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form YPO3861 IPR029044 Nucleotide-diphospho-sugar transferases YPO3861 IPR005835 Nucleotidyl transferase domain YPO3862 IPR005888 dTDP-glucose 4,6-dehydratase YPO3862 IPR016040 NAD(P)-binding domain YPO3862 IPR036291 NAD(P)-binding domain superfamily YPO3863 IPR032891 UDP-N-acetyl-D-mannosamine dehydrogenase WecC YPO3863 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase YPO3863 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal YPO3863 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily YPO3863 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal YPO3863 IPR017476 UDP-glucose/GDP-mannose dehydrogenase YPO3863 IPR036291 NAD(P)-binding domain superfamily YPO3863 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPO3863 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation YPO3864 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like YPO3864 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain YPO3864 IPR032892 UDP-N-acetylglucosamine 2-epimerase WecB YPO3865 IPR032895 ECA polysaccharide chain length modulation protein WzzE YPO3865 IPR003856 Polysaccharide chain length determinant N-terminal domain YPO3866 IPR000715 Glycosyl transferase, family 4 YPO3866 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase YPO3867 IPR011112 Rho termination factor, N-terminal YPO3867 IPR012340 Nucleic acid-binding, OB-fold YPO3867 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3867 IPR041703 Transcription termination factor Rho, ATP binding domain YPO3867 IPR036269 Rho termination factor, N-terminal domain superfamily YPO3867 IPR011129 Cold shock domain YPO3867 IPR004665 Transcription termination factor Rho YPO3867 IPR003593 AAA+ ATPase domain YPO3867 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain YPO3867 IPR011113 Rho termination factor, RNA-binding domain YPO3868 IPR005746 Thioredoxin YPO3868 IPR036249 Thioredoxin-like superfamily YPO3868 IPR017937 Thioredoxin, conserved site YPO3868 IPR013766 Thioredoxin domain YPO3869 IPR014001 Helicase superfamily 1/2, ATP-binding domain YPO3869 IPR011545 DEAD/DEAH box helicase domain YPO3869 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3869 IPR001650 Helicase, C-terminal YPO3869 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site YPO3869 IPR023554 ATP-dependent RNA helicase RhlB type YPO3869 IPR014014 RNA helicase, DEAD-box type, Q motif YPO3872 IPR013986 DExx box DNA helicase domain superfamily YPO3872 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3872 IPR014017 UvrD-like DNA helicase, C-terminal YPO3872 IPR005752 ATP-dependent DNA helicase Rep YPO3872 IPR034739 UvrD/AddA helicase, N-terminal YPO3872 IPR014016 UvrD-like helicase, ATP-binding domain YPO3872 IPR000212 DNA helicase, UvrD/REP type YPO3873 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site YPO3873 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type YPO3875 IPR001207 Transposase, mutator type YPO3878 IPR016147 Pili assembly chaperone, N-terminal YPO3878 IPR013783 Immunoglobulin-like fold YPO3878 IPR008962 PapD-like superfamily YPO3878 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YPO3878 IPR016148 Pili assembly chaperone, C-terminal YPO3878 IPR001829 Pili assembly chaperone, bacterial YPO3878 IPR018046 Pili assembly chaperone, conserved site YPO3879 IPR025949 PapC-like, C-terminal domain YPO3879 IPR042186 Outer membrane usher protein FimD, plug domain YPO3879 IPR018030 Fimbrial membrane usher, conserved site YPO3879 IPR025885 PapC, N-terminal domain YPO3879 IPR037224 PapC, N-terminal domain superfamily YPO3879 IPR000015 Outer membrane usher protein YPO3881 IPR013783 Immunoglobulin-like fold YPO3881 IPR016147 Pili assembly chaperone, N-terminal YPO3881 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YPO3881 IPR001829 Pili assembly chaperone, bacterial YPO3881 IPR016148 Pili assembly chaperone, C-terminal YPO3881 IPR018046 Pili assembly chaperone, conserved site YPO3881 IPR008962 PapD-like superfamily YPO3883 IPR035900 Colicin E immunity protein superfamily YPO3883 IPR000290 Colicin immunity protein/pyocin immunity protein YPO3888 IPR013116 Ketol-acid reductoisomerase, N-terminal YPO3888 IPR036291 NAD(P)-binding domain superfamily YPO3888 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPO3888 IPR013023 Ketol-acid reductoisomerase YPO3888 IPR013328 6-phosphogluconate dehydrogenase, domain 2 YPO3888 IPR000506 Ketol-acid reductoisomerase, C-terminal YPO3889 IPR000847 Transcription regulator HTH, LysR YPO3889 IPR037404 HTH-type transcriptional activator IlvY, PBP2 domain YPO3889 IPR036390 Winged helix DNA-binding domain superfamily YPO3889 IPR005119 LysR, substrate-binding YPO3889 IPR036388 Winged helix-like DNA-binding domain superfamily YPO3896 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPO3896 IPR001926 Pyridoxal-phosphate dependent enzyme YPO3896 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site YPO3896 IPR001721 Threonine dehydratase, ACT-like domain YPO3896 IPR005787 Threonine dehydratase, biosynthetic YPO3896 IPR038110 Threonine dehydratase, ACT-like domain superfamily YPO3897 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase YPO3897 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site YPO3897 IPR037237 IlvD/EDD, N-terminal domain YPO3897 IPR042096 Dihydroxy-acid dehydratase, C-terminal YPO3897 IPR004404 Dihydroxy-acid dehydratase YPO3899 IPR001544 Aminotransferase class IV YPO3899 IPR005785 Branched-chain amino acid aminotransferase I YPO3899 IPR033939 Branched-chain aminotransferase YPO3899 IPR018300 Aminotransferase, class IV, conserved site YPO3899 IPR036038 Aminotransferase-like, PLP-dependent enzymes YPO3900 IPR002912 ACT domain YPO3901 IPR029035 DHS-like NAD/FAD-binding domain superfamily YPO3901 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YPO3901 IPR012846 Acetolactate synthase, large subunit, biosynthetic YPO3901 IPR039368 Acetolactate synthase large subunit, TPP binding domain YPO3901 IPR029061 Thiamin diphosphate-binding fold YPO3901 IPR000399 TPP-binding enzyme, conserved site YPO3901 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain YPO3901 IPR012000 Thiamine pyrophosphate enzyme, central domain YPO3902 IPR020568 Ribosomal protein S5 domain 2-type fold YPO3902 IPR003593 AAA+ ATPase domain YPO3902 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3902 IPR004482 Mg chelatase-related protein YPO3902 IPR000523 Magnesium chelatase ChlI domain YPO3902 IPR025158 Mg chelatase-related protein, C-terminal domain YPO3902 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPO3903 IPR007335 Protein of unknown function DUF413 YPO3904 IPR005119 LysR, substrate-binding YPO3904 IPR036390 Winged helix DNA-binding domain superfamily YPO3904 IPR000847 Transcription regulator HTH, LysR YPO3904 IPR036388 Winged helix-like DNA-binding domain superfamily YPO3904 IPR020890 Transcription regulator HTH, HdfR YPO3905 IPR001851 ABC transporter, permease YPO3906 IPR001851 ABC transporter, permease YPO3907 IPR003593 AAA+ ATPase domain YPO3907 IPR017871 ABC transporter, conserved site YPO3907 IPR003439 ABC transporter-like YPO3907 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3908 IPR033893 ABC transporter periplasmic-binding protein YtfQ YPO3908 IPR025997 Periplasmic binding protein YPO3908 IPR028082 Periplasmic binding protein-like I YPO3909 IPR004391 Glutamate racemase YPO3909 IPR033134 Asp/Glu racemase, active site 2 YPO3909 IPR018187 Asp/Glu racemase, active site 1 YPO3909 IPR001920 Asp/Glu racemase YPO3909 IPR015942 Asp/Glu/hydantoin racemase YPO3910 IPR037066 TonB-dependent receptor, plug domain superfamily YPO3910 IPR010917 TonB-dependent receptor, conserved site YPO3910 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YPO3910 IPR010101 TonB-dependent vitamin B12 transporter BtuB YPO3910 IPR012910 TonB-dependent receptor, plug domain YPO3910 IPR000531 TonB-dependent receptor-like, beta-barrel YPO3910 IPR039426 Vitamin B12 transporter BtuB-like YPO3911 IPR010280 (Uracil-5)-methyltransferase family YPO3911 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA YPO3911 IPR030391 RNA methyltransferase TrmA, conserved site YPO3911 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO3911 IPR030390 RNA methyltransferase TrmA, active site YPO3912 IPR009867 Protein of unknown function DUF1422 YPO3913 IPR023764 Transcriptional repressor HTH, FabR YPO3913 IPR001647 DNA-binding HTH domain, TetR-type YPO3913 IPR009057 Homeobox-like domain superfamily YPO3914 IPR036188 FAD/NAD(P)-binding domain superfamily YPO3914 IPR023753 FAD/NAD(P)-binding domain YPO3914 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YPO3914 IPR022962 Soluble pyridine nucleotide transhydrogenase YPO3914 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I YPO3914 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily YPO3915 IPR000847 Transcription regulator HTH, LysR YPO3915 IPR036390 Winged helix DNA-binding domain superfamily YPO3915 IPR036388 Winged helix-like DNA-binding domain superfamily YPO3915 IPR005119 LysR, substrate-binding YPO3916 IPR002109 Glutaredoxin YPO3916 IPR011767 Glutaredoxin active site YPO3916 IPR013740 Redoxin YPO3916 IPR036249 Thioredoxin-like superfamily YPO3916 IPR014025 Glutaredoxin subgroup YPO3916 IPR011906 Glutaredoxin domain YPO3916 IPR037944 Peroxiredoxin-5-like YPO3917 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YPO3917 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I YPO3917 IPR006258 Dihydrolipoamide dehydrogenase YPO3917 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site YPO3917 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily YPO3917 IPR023753 FAD/NAD(P)-binding domain YPO3917 IPR036188 FAD/NAD(P)-binding domain superfamily YPO3918 IPR006260 TonB/TolA, C-terminal YPO3918 IPR037682 TonB, C-terminal YPO3919 IPR006144 Secretion protein HlyD, conserved site YPO3919 IPR010129 Type I secretion membrane fusion protein, HlyD family YPO3920 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3920 IPR010128 ATPase, type I secretion system, PrtD YPO3920 IPR017871 ABC transporter, conserved site YPO3920 IPR003439 ABC transporter-like YPO3920 IPR036640 ABC transporter type 1, transmembrane domain superfamily YPO3920 IPR003593 AAA+ ATPase domain YPO3920 IPR011527 ABC transporter type 1, transmembrane domain YPO3923 IPR012910 TonB-dependent receptor, plug domain YPO3923 IPR037066 TonB-dependent receptor, plug domain superfamily YPO3923 IPR000531 TonB-dependent receptor-like, beta-barrel YPO3923 IPR011276 TonB-dependent haem/haemoglobin receptor YPO3923 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor YPO3923 IPR039426 Vitamin B12 transporter BtuB-like YPO3923 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily YPO3924 IPR008948 L-Aspartase-like YPO3924 IPR000362 Fumarate lyase family YPO3924 IPR020557 Fumarate lyase, conserved site YPO3924 IPR029419 Argininosuccinate lyase, C-terminal YPO3924 IPR024083 Fumarase/histidase, N-terminal YPO3924 IPR009049 Argininosuccinate lyase YPO3924 IPR022761 Fumarate lyase, N-terminal YPO3925 IPR037528 Acetylglutamate kinase ArgB YPO3925 IPR001048 Aspartate/glutamate/uridylate kinase YPO3925 IPR041731 N-Acetyl-L-glutamate kinase, noncyclic YPO3925 IPR036393 Acetylglutamate kinase-like superfamily YPO3925 IPR004662 Acetylglutamate kinase family YPO3927 IPR012280 Semialdehyde dehydrogenase, dimerisation domain YPO3927 IPR036291 NAD(P)-binding domain superfamily YPO3927 IPR000534 Semialdehyde dehydrogenase, NAD-binding YPO3927 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site YPO3927 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 YPO3928 IPR010169 Acetylornithine deacetylase ArgE YPO3928 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site YPO3928 IPR036264 Bacterial exopeptidase dimerisation domain YPO3928 IPR011650 Peptidase M20, dimerisation domain YPO3928 IPR002933 Peptidase M20 YPO3929 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily YPO3929 IPR021135 Phosphoenolpyruvate carboxylase YPO3929 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site YPO3929 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type YPO3929 IPR033129 Phosphoenolpyruvate carboxylase, His active site YPO3932 IPR012337 Ribonuclease H-like superfamily YPO3932 IPR001584 Integrase, catalytic core YPO3932 IPR038965 Transposase InsF-like YPO3932 IPR025948 HTH-like domain YPO3932 IPR036397 Ribonuclease H superfamily YPO3937 IPR006076 FAD dependent oxidoreductase YPO3937 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily YPO3937 IPR031656 Alpha-glycerophosphate oxidase, C-terminal YPO3937 IPR036188 FAD/NAD(P)-binding domain superfamily YPO3937 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase YPO3938 IPR000811 Glycosyl transferase, family 35 YPO3938 IPR011833 Glycogen/starch/alpha-glucan phosphorylase YPO3938 IPR035090 Phosphorylase pyridoxal-phosphate attachment site YPO3939 IPR001296 Glycosyl transferase, family 1 YPO3939 IPR013534 Starch synthase, catalytic domain YPO3939 IPR011835 Bacterial/plant glycogen synthase YPO3940 IPR011004 Trimeric LpxA-like superfamily YPO3940 IPR011831 Glucose-1-phosphate adenylyltransferase YPO3940 IPR005836 ADP-glucose pyrophosphorylase, conserved site YPO3940 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial YPO3940 IPR029044 Nucleotide-diphospho-sugar transferases YPO3940 IPR005835 Nucleotidyl transferase domain YPO3941 IPR013780 Glycosyl hydrolase, all-beta YPO3941 IPR006047 Glycosyl hydrolase, family 13, catalytic domain YPO3941 IPR004193 Glycoside hydrolase, family 13, N-terminal YPO3941 IPR022844 Glycogen debranching enzyme, bacterial YPO3941 IPR011837 Glycogen debranching enzyme, GlgX type YPO3941 IPR017853 Glycoside hydrolase superfamily YPO3941 IPR013783 Immunoglobulin-like fold YPO3941 IPR014756 Immunoglobulin E-set YPO3941 IPR040784 Glycogen debranching enzyme, C-terminal domain YPO3942 IPR037439 1,4-alpha-glucan-branching enzyme YPO3942 IPR017853 Glycoside hydrolase superfamily YPO3942 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB YPO3942 IPR006047 Glycosyl hydrolase, family 13, catalytic domain YPO3942 IPR013783 Immunoglobulin-like fold YPO3942 IPR013780 Glycosyl hydrolase, all-beta YPO3942 IPR014756 Immunoglobulin E-set YPO3942 IPR004193 Glycoside hydrolase, family 13, N-terminal YPO3942 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta YPO3943 IPR010559 Signal transduction histidine kinase, internal region YPO3943 IPR003018 GAF domain YPO3943 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPO3943 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region YPO3944 IPR003535 Intimin/invasin bacterial adhesion mediator protein YPO3944 IPR013783 Immunoglobulin-like fold YPO3944 IPR038177 Inverse autotransporter, beta-domain superfamily YPO3944 IPR024519 Inverse autotransporter, beta-domain YPO3944 IPR016187 C-type lectin fold YPO3944 IPR016186 C-type lectin-like/link domain superfamily YPO3944 IPR003344 Big-1 (bacterial Ig-like domain 1) domain YPO3944 IPR013117 Intimin, C-terminal YPO3944 IPR008964 Invasin/intimin cell-adhesion fragments YPO3944 IPR015217 Invasin, domain 3 YPO3949 IPR000534 Semialdehyde dehydrogenase, NAD-binding YPO3949 IPR036291 NAD(P)-binding domain superfamily YPO3949 IPR012280 Semialdehyde dehydrogenase, dimerisation domain YPO3949 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type YPO3949 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site YPO3949 IPR012080 Aspartate-semialdehyde dehydrogenase YPO3950 IPR002771 Multiple antibiotic resistance (MarC)-related YPO3953 IPR006001 Carbohydrate kinase, thermoresistant glucokinase YPO3953 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3953 IPR031322 Shikimate kinase/gluconokinase YPO3954 IPR003474 Gluconate transporter YPO3955 IPR028082 Periplasmic binding protein-like I YPO3955 IPR000843 LacI-type HTH domain YPO3955 IPR010982 Lambda repressor-like, DNA-binding domain superfamily YPO3955 IPR001761 Periplasmic binding protein/LacI sugar binding domain YPO3956 IPR012093 Pirin YPO3956 IPR011051 RmlC-like cupin domain superfamily YPO3956 IPR003829 Pirin, N-terminal domain YPO3956 IPR014710 RmlC-like jelly roll fold YPO3956 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain YPO3958 IPR016032 Signal transduction response regulator, C-terminal effector YPO3958 IPR001867 OmpR/PhoB-type DNA-binding domain YPO3958 IPR039420 Transcriptional regulatory protein WalR-like YPO3958 IPR036388 Winged helix-like DNA-binding domain superfamily YPO3958 IPR011006 CheY-like superfamily YPO3958 IPR001789 Signal transduction response regulator, receiver domain YPO3960 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 YPO3960 IPR013785 Aldolase-type TIM barrel YPO3960 IPR000771 Fructose-bisphosphate aldolase, class-II YPO3962 IPR028082 Periplasmic binding protein-like I YPO3962 IPR025997 Periplasmic binding protein YPO3963 IPR001851 ABC transporter, permease YPO3964 IPR003439 ABC transporter-like YPO3964 IPR017871 ABC transporter, conserved site YPO3964 IPR003593 AAA+ ATPase domain YPO3964 IPR015861 ABC transporter, ribose import, RbsA YPO3964 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3965 IPR005467 Histidine kinase domain YPO3965 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain YPO3965 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily YPO3965 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPO3965 IPR035965 PAS domain superfamily YPO3965 IPR003594 Histidine kinase/HSP90-like ATPase YPO3965 IPR011006 CheY-like superfamily YPO3965 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPO3965 IPR001789 Signal transduction response regulator, receiver domain YPO3965 IPR000014 PAS domain YPO3965 IPR013656 PAS fold-4 YPO3966 IPR023166 HI0933-like insert domain superfamily YPO3966 IPR036188 FAD/NAD(P)-binding domain superfamily YPO3966 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like YPO3967 IPR001204 Phosphate transporter YPO3968 IPR002686 Transposase IS200-like YPO3968 IPR036515 Transposase IS200-like superfamily YPO3969 IPR019598 Universal stress protein B YPO3970 IPR006015 Universal stress protein A family YPO3970 IPR006016 UspA YPO3970 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO3971 IPR033922 NAD(P) binding domain of glutamate dehydrogenase YPO3971 IPR036291 NAD(P)-binding domain superfamily YPO3971 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase YPO3971 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain YPO3971 IPR014362 Glutamate dehydrogenase YPO3971 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal YPO3971 IPR033524 Leu/Phe/Val dehydrogenases active site YPO3973 IPR034033 Serralysin-like metallopeptidase domain YPO3973 IPR018511 Hemolysin-type calcium-binding conserved site YPO3973 IPR001343 RTX calcium-binding nonapeptide repeat YPO3973 IPR024079 Metallopeptidase, catalytic domain superfamily YPO3973 IPR016294 Peptidase M10B YPO3973 IPR013858 Peptidase M10 serralysin, C-terminal YPO3973 IPR006026 Peptidase, metallopeptidase YPO3973 IPR001818 Peptidase M10, metallopeptidase YPO3973 IPR011049 Serralysin-like metalloprotease, C-terminal YPO3974 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO3974 IPR007536 Ribosomal RNA small subunit methyltransferase J YPO3975 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 YPO3975 IPR001567 Peptidase M3A/M3B catalytic domain YPO3976 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO3976 IPR007473 Ribosomal RNA large subunit methyltransferase J YPO3976 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPO3977 IPR036188 FAD/NAD(P)-binding domain superfamily YPO3977 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YPO3977 IPR023753 FAD/NAD(P)-binding domain YPO3977 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I YPO3977 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily YPO3977 IPR006322 Glutathione reductase, eukaryote/bacterial YPO3977 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site YPO3978 IPR008599 Putative sugar diacid recognition YPO3978 IPR025736 PucR C-terminal helix-turn-helix domain YPO3978 IPR041522 CdaR, GGDEF-like domain YPO3978 IPR042070 PucR C-terminal helix-turn-helix domain superfamily YPO3979 IPR003474 Gluconate transporter YPO3980 IPR018193 Glycerate kinase, flavodoxin-like fold YPO3980 IPR004381 Glycerate kinase YPO3980 IPR018197 Glycerate kinase, restriction-enzyme-like fold YPO3980 IPR036129 Glycerate kinase superfamily YPO3985 IPR005274 Inner membrane protein YhjD YPO3985 IPR017039 Virulence factor BrkB YPO3986 IPR003763 CDP-diacylglycerol pyrophosphatase YPO3986 IPR038433 CDP-diacylglycerol pyrophosphatase superfamily YPO3986 IPR036265 HIT-like superfamily YPO3987 IPR007844 AsmA YPO3988 IPR035919 EAL domain superfamily YPO3988 IPR001633 EAL domain YPO3989 IPR004370 4-oxalocrotonate tautomerase YPO3989 IPR014347 Tautomerase/MIF superfamily YPO3989 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type YPO3990 IPR011611 Carbohydrate kinase PfkB YPO3990 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YPO3990 IPR029056 Ribokinase-like YPO3991 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like YPO3991 IPR011765 Peptidase M16, N-terminal YPO3991 IPR007863 Peptidase M16, C-terminal YPO3992 IPR036458 Sodium:dicarboxylate symporter superfamily YPO3992 IPR018107 Sodium:dicarboxylate symporter, conserved site YPO3992 IPR001991 Sodium:dicarboxylate symporter YPO3992 IPR023954 C4-dicarboxylate transport protein YPO3994 IPR010702 Periplasmic pectate lyase YPO3995 IPR009331 Oligogalacturonate-specific porin YPO3996 IPR001633 EAL domain YPO3996 IPR035919 EAL domain superfamily YPO3996 IPR029787 Nucleotide cyclase YPO3996 IPR003660 HAMP domain YPO3996 IPR000160 GGDEF domain YPO3996 IPR033419 Gammaproteobacterial periplasmic sensor domain GAPES3 YPO3999 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YPO3999 IPR003593 AAA+ ATPase domain YPO3999 IPR003439 ABC transporter-like YPO3999 IPR017871 ABC transporter, conserved site YPO3999 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO4000 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO4000 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YPO4000 IPR017871 ABC transporter, conserved site YPO4000 IPR003439 ABC transporter-like YPO4000 IPR003593 AAA+ ATPase domain YPO4001 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YPO4001 IPR035906 MetI-like superfamily YPO4001 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO4002 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO4002 IPR035906 MetI-like superfamily YPO4003 IPR039424 Solute-binding protein family 5 YPO4003 IPR023765 Solute-binding protein family 5, conserved site YPO4003 IPR000914 Solute-binding protein family 5 domain YPO4003 IPR030678 Peptide/nickel binding protein, MppA-type YPO4005 IPR005565 Haemolysin activator HlyB, C-terminal YPO4005 IPR013686 Polypeptide-transport-associated, ShlB-type YPO4005 IPR034746 POTRA domain YPO4005 IPR035251 ShlB, POTRA domain YPO4005 IPR027282 Two partner secretion pathway transporter YPO4006 IPR008638 Filamentous haemagglutinin, N-terminal YPO4006 IPR011050 Pectin lyase fold/virulence factor YPO4006 IPR006914 VENN motif-containing domain YPO4006 IPR012334 Pectin lyase fold YPO4006 IPR006626 Parallel beta-helix repeat YPO4006 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPO4006 IPR008619 Filamentous haemagglutinin repeat YPO4006 IPR025157 Hemagglutinin repeat YPO4007 IPR000849 Sugar phosphate transporter YPO4007 IPR020846 Major facilitator superfamily domain YPO4007 IPR011701 Major facilitator superfamily YPO4007 IPR036259 MFS transporter superfamily YPO4007 IPR021159 Glycerate/sugar phosphate transporter, conserved site YPO4009 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO4009 IPR002611 IstB-like ATP-binding protein YPO4009 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO4009 IPR003593 AAA+ ATPase domain YPO4009 IPR001270 ClpA/B family YPO4010 IPR036397 Ribonuclease H superfamily YPO4010 IPR006120 Resolvase, HTH domain YPO4010 IPR012337 Ribonuclease H-like superfamily YPO4010 IPR001584 Integrase, catalytic core YPO4010 IPR017894 HTH domain, IS21 transposase-type YPO4012 IPR016032 Signal transduction response regulator, C-terminal effector YPO4012 IPR001789 Signal transduction response regulator, receiver domain YPO4012 IPR011006 CheY-like superfamily YPO4012 IPR000792 Transcription regulator LuxR, C-terminal YPO4013 IPR012549 Phosphoethanolamine transferase, N-terminal YPO4013 IPR017850 Alkaline-phosphatase-like, core domain superfamily YPO4013 IPR040423 Phosphoethanolamine transferase YPO4013 IPR000917 Sulfatase, N-terminal YPO4014 IPR022742 Serine aminopeptidase, S33 YPO4014 IPR012354 Esterase/lipase YPO4014 IPR029058 Alpha/Beta hydrolase fold YPO4015 IPR004840 Amino acid permease, conserved site YPO4015 IPR004841 Amino acid permease/ SLC12A domain YPO4016 IPR022313 Phenylalanine/histidine ammonia-lyases, active site YPO4016 IPR008948 L-Aspartase-like YPO4016 IPR005921 Histidine ammonia-lyase YPO4016 IPR001106 Aromatic amino acid lyase YPO4016 IPR024083 Fumarase/histidase, N-terminal YPO4017 IPR038364 Urocanase, central domain superfamily YPO4017 IPR035401 Urocanase, C-terminal domain YPO4017 IPR023637 Urocanase YPO4017 IPR035400 Urocanase, N-terminal domain YPO4017 IPR035085 Urocanase, Rossmann-like domain YPO4017 IPR036190 Urocanase superfamily YPO4017 IPR023636 Urocanase conserved site YPO4018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site YPO4018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPO4018 IPR005858 Cysteine synthase CysM YPO4018 IPR001926 Pyridoxal-phosphate dependent enzyme YPO4018 IPR005856 Cysteine synthase YPO4019 IPR005764 Adenine phosphoribosyl transferase YPO4019 IPR000836 Phosphoribosyltransferase domain YPO4019 IPR029057 Phosphoribosyltransferase-like YPO4021 IPR011761 ATP-grasp fold YPO4022 IPR002491 ABC transporter periplasmic binding domain YPO4022 IPR033870 FatB domain YPO4023 IPR000522 ABC transporter, permease protein, BtuC-like YPO4023 IPR037294 ABC transporter, BtuC-like YPO4024 IPR000522 ABC transporter, permease protein, BtuC-like YPO4024 IPR037294 ABC transporter, BtuC-like YPO4025 IPR003593 AAA+ ATPase domain YPO4025 IPR003439 ABC transporter-like YPO4025 IPR017871 ABC transporter, conserved site YPO4025 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO4031 IPR007684 Zinc finger, Ogr/Delta-type YPO4033 IPR004107 Integrase, SAM-like, N-terminal YPO4033 IPR010998 Integrase/recombinase, N-terminal YPO4033 IPR025166 Integrase, DNA-binding domain YPO4033 IPR038488 Integrase, DNA-binding domain superfamily YPO4033 IPR002104 Integrase, catalytic domain YPO4033 IPR013762 Integrase-like, catalytic domain superfamily YPO4033 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPO4034 IPR020449 Transcription regulator HTH, AraC- type YPO4034 IPR028082 Periplasmic binding protein-like I YPO4034 IPR018062 HTH domain AraC-type, conserved site YPO4034 IPR018060 DNA binding HTH domain, AraC-type YPO4034 IPR009057 Homeobox-like domain superfamily YPO4035 IPR001851 ABC transporter, permease YPO4036 IPR013455 ABC transporter, D-xylose, ATP-binding protein YPO4036 IPR017871 ABC transporter, conserved site YPO4036 IPR003439 ABC transporter-like YPO4036 IPR003593 AAA+ ATPase domain YPO4036 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO4037 IPR028082 Periplasmic binding protein-like I YPO4037 IPR013456 D-xylose ABC transporter, substrate-binding protein YPO4037 IPR025997 Periplasmic binding protein YPO4038 IPR001998 Xylose isomerase YPO4038 IPR036237 Xylose isomerase-like superfamily YPO4038 IPR013452 Xylose isomerase, bacterial-type YPO4039 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPO4039 IPR006000 Xylulokinase YPO4039 IPR018483 Carbohydrate kinase, FGGY, conserved site YPO4039 IPR000577 Carbohydrate kinase, FGGY YPO4039 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPO4041 IPR001829 Pili assembly chaperone, bacterial YPO4041 IPR016148 Pili assembly chaperone, C-terminal YPO4041 IPR018046 Pili assembly chaperone, conserved site YPO4041 IPR036316 Pili assembly chaperone, C-terminal domain superfamily YPO4041 IPR016147 Pili assembly chaperone, N-terminal YPO4041 IPR008962 PapD-like superfamily YPO4041 IPR013783 Immunoglobulin-like fold YPO4044 IPR000259 Fimbrial-type adhesion domain YPO4044 IPR036937 Fimbrial-type adhesion domain superfamily YPO4044 IPR008966 Adhesion domain superfamily YPO4045 IPR032905 O-acetyltransferase WecH YPO4045 IPR002656 Acyltransferase 3 YPO4047 IPR025948 HTH-like domain YPO4047 IPR038965 Transposase InsF-like YPO4047 IPR001584 Integrase, catalytic core YPO4047 IPR012337 Ribonuclease H-like superfamily YPO4047 IPR036397 Ribonuclease H superfamily YPO4048 IPR020846 Major facilitator superfamily domain YPO4048 IPR036259 MFS transporter superfamily YPO4048 IPR011701 Major facilitator superfamily YPO4054 IPR015424 Pyridoxal phosphate-dependent transferase YPO4054 IPR004534 L-seryl-tRNA(Sec) selenium transferase YPO4054 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain YPO4054 IPR018319 L-seryl-tRNA selenium transferase-like YPO4054 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPO4055 IPR006452 Formate dehydrogenase accessory protein YPO4055 IPR024064 FdhE-like superfamily YPO4056 IPR006471 Formate dehydrogenase, gamma subunit YPO4056 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase YPO4056 IPR016174 Di-haem cytochrome, transmembrane YPO4057 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPO4057 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria YPO4057 IPR015246 Formate dehydrogenase, transmembrane YPO4057 IPR014603 Formate dehydrogenase iron-sulphur subunit YPO4057 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO4057 IPR038384 Formate dehydrogenase, C-terminal domain superfamily YPO4060 IPR003786 Sulfur carrier protein FdhD YPO4060 IPR016193 Cytidine deaminase-like YPO4061 IPR019831 Manganese/iron superoxide dismutase, N-terminal YPO4061 IPR001189 Manganese/iron superoxide dismutase YPO4061 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily YPO4061 IPR019833 Manganese/iron superoxide dismutase, binding site YPO4061 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily YPO4061 IPR019832 Manganese/iron superoxide dismutase, C-terminal YPO4062 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily YPO4062 IPR004090 Chemotaxis methyl-accepting receptor YPO4062 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site YPO4062 IPR003660 HAMP domain YPO4062 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YPO4062 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding YPO4065 IPR021230 Protein of unknown function DUF2810 YPO4066 IPR038026 MtlR-like superfamily YPO4066 IPR007761 Mannitol repressor MtlR-like YPO4067 IPR036291 NAD(P)-binding domain superfamily YPO4067 IPR013131 Mannitol dehydrogenase, N-terminal YPO4067 IPR023028 Mannitol-1-phosphate 5-dehydrogenase YPO4067 IPR023027 Mannitol dehydrogenase, conserved site YPO4067 IPR013118 Mannitol dehydrogenase, C-terminal YPO4067 IPR000669 Mannitol dehydrogenase YPO4067 IPR013328 6-phosphogluconate dehydrogenase, domain 2 YPO4067 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily YPO4068 IPR003352 Phosphotransferase system, EIIC YPO4068 IPR029503 Phosphotransferase system EIIB component, mannitol-specific YPO4068 IPR013014 Phosphotransferase system, EIIC component, type 2 YPO4068 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC YPO4068 IPR013011 Phosphotransferase system, EIIB component, type 2 YPO4068 IPR003501 Phosphotransferase system, EIIB component, type 2/3 YPO4068 IPR016152 Phosphotransferase/anion transporter YPO4068 IPR036095 PTS system IIB component-like superfamily YPO4068 IPR002178 PTS EIIA type-2 domain YPO4070 IPR021413 Protein of unknown function DUF3053 YPO4071 IPR015944 Glycine-tRNA ligase, beta subunit YPO4071 IPR008909 DALR anticodon binding YPO4071 IPR006194 Glycine-tRNA synthetase, heterodimeric YPO4072 IPR006194 Glycine-tRNA synthetase, heterodimeric YPO4072 IPR002310 Glycine-tRNA ligase, alpha subunit YPO4074 IPR005019 Methyladenine glycosylase YPO4074 IPR011257 DNA glycosylase YPO4074 IPR004597 DNA-3-methyladenine glycosylase I YPO4076 IPR039567 Glycine zipper domain YPO4076 IPR006664 Outer membrane protein, bacterial YPO4076 IPR006665 OmpA-like domain YPO4076 IPR006690 Outer membrane protein, OmpA-like, conserved site YPO4076 IPR036737 OmpA-like domain superfamily YPO4078 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain YPO4078 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YPO4078 IPR036291 NAD(P)-binding domain superfamily YPO4078 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPO4078 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YPO4078 IPR023756 Glyoxylate/hydroxypyruvate reductase B YPO4080 IPR006047 Glycosyl hydrolase, family 13, catalytic domain YPO4080 IPR017853 Glycoside hydrolase superfamily YPO4080 IPR014635 Alpha-amylase, MalS type YPO4082 IPR015424 Pyridoxal phosphate-dependent transferase YPO4082 IPR004839 Aminotransferase, class I/classII YPO4082 IPR015421 Pyridoxal phosphate-dependent transferase, major domain YPO4083 IPR006037 Regulator of K+ conductance, C-terminal YPO4083 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily YPO4083 IPR023018 Transport protein YidE, putative YPO4083 IPR006512 YidE/YbjL duplication YPO4084 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain YPO4084 IPR002068 Alpha crystallin/Hsp20 domain YPO4084 IPR008978 HSP20-like chaperone YPO4084 IPR022848 Small heat shock protein IbpB YPO4085 IPR023728 Small heat shock protein IbpA YPO4085 IPR008978 HSP20-like chaperone YPO4085 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain YPO4085 IPR002068 Alpha crystallin/Hsp20 domain YPO4086 IPR010780 Protein of unknown function DUF1375 YPO4089 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site YPO4089 IPR001926 Pyridoxal-phosphate dependent enzyme YPO4089 IPR002912 ACT domain YPO4089 IPR005789 Threonine dehydratase, catabolic YPO4089 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPO4090 IPR003462 Ornithine cyclodeaminase/mu-crystallin YPO4090 IPR036291 NAD(P)-binding domain superfamily YPO4090 IPR014334 Ectoine utilization protein EutC YPO4090 IPR023401 Ornithine cyclodeaminase, N-terminal YPO4092 IPR001584 Integrase, catalytic core YPO4092 IPR025948 HTH-like domain YPO4092 IPR036397 Ribonuclease H superfamily YPO4092 IPR012337 Ribonuclease H-like superfamily YPO4092 IPR038965 Transposase InsF-like YPO4093 IPR006379 HAD-superfamily hydrolase, subfamily IIB YPO4093 IPR023214 HAD superfamily YPO4093 IPR036412 HAD-like superfamily YPO4093 IPR000150 Cof family YPO4094 IPR041423 DNA gyrase subunit B insert domain YPO4094 IPR001241 DNA topoisomerase, type IIA YPO4094 IPR002288 DNA gyrase B subunit, C-terminal YPO4094 IPR011557 DNA gyrase, subunit B YPO4094 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPO4094 IPR036890 Histidine kinase/HSP90-like ATPase superfamily YPO4094 IPR020568 Ribosomal protein S5 domain 2-type fold YPO4094 IPR013760 DNA topoisomerase, type IIA-like domain superfamily YPO4094 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal YPO4094 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 YPO4094 IPR018522 DNA topoisomerase, type IIA, conserved site YPO4094 IPR006171 TOPRIM domain YPO4094 IPR034160 DNA gyrase subunit B, TOPRIM domain YPO4094 IPR003594 Histidine kinase/HSP90-like ATPase YPO4095 IPR003395 RecF/RecN/SMC, N-terminal YPO4095 IPR001238 DNA-binding, RecF YPO4095 IPR018078 DNA-binding, RecF, conserved site YPO4095 IPR042174 DNA-binding RecF, domain 2 YPO4095 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO4096 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal YPO4096 IPR022637 DNA polymerase III, beta sliding clamp, central YPO4096 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal YPO4096 IPR001001 DNA polymerase III, beta sliding clamp YPO4097 IPR003593 AAA+ ATPase domain YPO4097 IPR010921 Trp repressor/replication initiator YPO4097 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO4097 IPR038454 DnaA, N-terminal domain superfamily YPO4097 IPR020591 Chromosomal replication control, initiator DnaA-like YPO4097 IPR024633 DnaA N-terminal domain YPO4097 IPR013159 Chromosomal replication initiator, DnaA C-terminal YPO4097 IPR001957 Chromosomal replication control, initiator DnaA YPO4097 IPR018312 Chromosomal replication control, initiator DnaA, conserved site YPO4097 IPR013317 Chromosomal replication initiator protein DnaA YPO4100 IPR000271 Ribosomal protein L34 YPO4100 IPR020939 Ribosomal protein L34, conserved site YPO4101 IPR020539 Ribonuclease P, conserved site YPO4101 IPR000100 Ribonuclease P YPO4101 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPO4101 IPR020568 Ribosomal protein S5 domain 2-type fold YPO4102 IPR038221 YidC, periplasmic domain superfamily YPO4102 IPR038210 Membrane insertase YidC, periplasmic domain YPO4102 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 YPO4102 IPR028053 Membrane insertase YidC, N-terminal YPO4102 IPR019998 Membrane insertase YidC YPO4102 IPR028055 Membrane insertase YidC/Oxa1, C-terminal YPO4103 IPR005225 Small GTP-binding protein domain YPO4103 IPR031168 TrmE-type guanine nucleotide-binding domain YPO4103 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 YPO4103 IPR004520 tRNA modification GTPase MnmE YPO4103 IPR018948 GTP-binding protein TrmE, N-terminal YPO4103 IPR027368 tRNA modification GTPase MnmE domain 2 YPO4103 IPR025867 MnmE, helical domain YPO4103 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO4103 IPR006073 GTP binding domain YPO4104 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative YPO4104 IPR010758 Trans-2-enoyl-CoA reductase YPO4104 IPR024906 Enoyl reductase FAD binding domain YPO4107 IPR026033 Azaguanine-like transporters YPO4107 IPR006043 Xanthine/uracil/vitamin C permease YPO4108 IPR023198 Phosphoglycolate phosphatase-like, domain 2 YPO4108 IPR036412 HAD-like superfamily YPO4108 IPR041492 Haloacid dehalogenase-like hydrolase YPO4108 IPR023214 HAD superfamily YPO4108 IPR006439 HAD hydrolase, subfamily IA YPO4109 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain YPO4109 IPR035906 MetI-like superfamily YPO4109 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO4110 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain YPO4110 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO4110 IPR035906 MetI-like superfamily YPO4111 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF YPO4111 IPR018313 Solute-binding protein family 3, conserved site YPO4111 IPR001320 Ionotropic glutamate receptor YPO4111 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter YPO4113 IPR028366 Phosphate transport system protein PhoU YPO4113 IPR038078 PhoU-like domain superfamily YPO4113 IPR026022 PhoU domain YPO4114 IPR003593 AAA+ ATPase domain YPO4114 IPR003439 ABC transporter-like YPO4114 IPR017871 ABC transporter, conserved site YPO4114 IPR015850 ABC transporter, phosphate import, PstB YPO4114 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO4114 IPR005670 Phosphate transport system permease protein 1 YPO4115 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO4115 IPR035906 MetI-like superfamily YPO4115 IPR005672 Phosphate transport system permease protein PstA YPO4116 IPR011864 Phosphate ABC transporter, permease protein PstC YPO4116 IPR000515 ABC transporter type 1, transmembrane domain MetI-like YPO4116 IPR035906 MetI-like superfamily YPO4117 IPR024370 PBP domain YPO4117 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS YPO4118 IPR001347 Sugar isomerase (SIS) YPO4118 IPR029055 Nucleophile aminohydrolases, N-terminal YPO4118 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising YPO4118 IPR035490 GlmS/FrlB, SIS domain 2 YPO4118 IPR035466 GlmS/AgaS, SIS domain 1 YPO4118 IPR017932 Glutamine amidotransferase type 2 domain YPO4119 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase YPO4119 IPR038009 GlmU, C-terminal LbH domain YPO4119 IPR001451 Hexapeptide repeat YPO4119 IPR025877 MobA-like NTP transferase YPO4119 IPR029044 Nucleotide-diphospho-sugar transferases YPO4119 IPR011004 Trimeric LpxA-like superfamily YPO4119 IPR018357 Hexapeptide transferase, conserved site YPO4120 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal YPO4120 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal YPO4120 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain YPO4120 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit YPO4120 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily YPO4121 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO4121 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal YPO4121 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain YPO4121 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily YPO4121 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain YPO4121 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site YPO4121 IPR005722 ATP synthase, F1 complex, beta subunit YPO4121 IPR003593 AAA+ ATPase domain YPO4122 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site YPO4122 IPR000131 ATP synthase, F1 complex, gamma subunit YPO4122 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily YPO4123 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain YPO4123 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily YPO4123 IPR000793 ATP synthase, alpha subunit, C-terminal YPO4123 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily YPO4123 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site YPO4123 IPR005294 ATP synthase, F1 complex, alpha subunit YPO4123 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily YPO4123 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain YPO4123 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO4123 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain YPO4124 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily YPO4124 IPR020781 ATPase, OSCP/delta subunit, conserved site YPO4124 IPR000711 ATPase, OSCP/delta subunit YPO4125 IPR005864 ATP synthase, F0 complex, subunit b, bacterial YPO4125 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast YPO4125 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily YPO4126 IPR000454 ATP synthase, F0 complex, subunit C YPO4126 IPR035921 F/V-ATP synthase subunit C superfamily YPO4126 IPR002379 V-ATPase proteolipid subunit C-like domain YPO4126 IPR038662 F1F0 ATP synthase subunit C superfamily YPO4126 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site YPO4126 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast YPO4127 IPR023011 ATP synthase, F0 complex, subunit A, active site YPO4127 IPR000568 ATP synthase, F0 complex, subunit A YPO4127 IPR035908 ATP synthase, F0 complex, subunit A superfamily YPO4128 IPR005598 ATP synthase protein I YPO4129 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase YPO4129 IPR003682 rRNA small subunit methyltransferase G YPO4130 IPR020595 MnmG-related, conserved site YPO4130 IPR036188 FAD/NAD(P)-binding domain superfamily YPO4130 IPR026904 GidA associated domain 3 YPO4130 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG YPO4130 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related YPO828a IPR036515 Transposase IS200-like superfamily YPO828a IPR002686 Transposase IS200-like YPPCP1.06 IPR023051 Potassium uptake protein, low affinity, Kup YPPCP1.06 IPR003855 Potassium transporter