YOP2083 IPR002104 Integrase, catalytic YOP2083 IPR011010 DNA breaking-rejoining enzyme, catalytic core YOP2083 IPR013762 Integrase-like, catalytic core YOP2083 IPR022000 Domain of unknown function (DUF3596) YOP2083 IPR023109 Integrase/recombinase, N-terminal YP02742 IPR011990 Tetratricopeptide-like helical domain YP02742 IPR017560 Cytochrome c-type biogenesis protein CcmI YPCD1.16c IPR020846 Major facilitator superfamily domain YPCD1.57 IPR000182 GNAT domain YPCD1.57 IPR012660 Thioesterase, putative YPCD1.57 IPR016181 Acyl-CoA N-acyltransferase YPCD1.57 IPR029069 HotDog domain YPCD1.65 IPR004445 Sodium/glutamate symporter YPMT1.15c IPR013482 Molybdenum cofactor guanylyltransferase YPMT1.15c IPR025877 MobA-like NTP transferase domain YPMT1.15c IPR029044 Nucleotide-diphospho-sugar transferases YPMT1.46c IPR011545 DEAD/DEAH box helicase domain YPMT1.46c IPR027417 P-loop containing nucleoside triphosphate hydrolase YPMT1.49Ac IPR004095 TGS YPMT1.49Ac IPR012675 Beta-grasp domain YPMT1.49Ac IPR012676 TGS-like YPMT1.50c IPR003607 HD/PDEase domain YPMT1.50c IPR004811 RelA/SpoT family YPMT1.50c IPR007685 RelA/SpoT YPMT1.56c IPR005229 Conserved hypothetical protein CHP00255 YPMT1.56c IPR013527 YicC-like, N-terminal YPMT1.60c IPR003382 Flavoprotein YPMT1.68A IPR004839 Aminotransferase, class I/classII YPMT1.68A IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPMT1.68A IPR015424 Pyridoxal phosphate-dependent transferase YPO0001 IPR001094 Flavodoxin YPO0001 IPR008254 Flavodoxin/nitric oxide synthase YPO0001 IPR029039 Flavoprotein-like YPO0002 IPR000485 AsnC-type HTH domain YPO0002 IPR011008 Dimeric alpha-beta barrel YPO0002 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0002 IPR019885 Transcription regulator HTH, AsnC-type, conserved site YPO0002 IPR019887 Transcription regulator AsnC-type, C-terminal YPO0002 IPR019888 Transcription regulator AsnC-type YPO0003 IPR004618 Aspartate--ammonia ligase YPO0004 IPR002035 von Willebrand factor, type A YPO0004 IPR008912 Uncharacterised protein family CoxE-like YPO0004 IPR023481 Uncharacterised protein family ViaA YPO0005 IPR003593 AAA+ ATPase domain YPO0005 IPR011704 ATPase, dynein-related, AAA domain YPO0005 IPR022547 ATPase, RavA, C-terminal YPO0005 IPR023671 ATPase RavA YPO0005 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0006 IPR003855 K+ potassium transporter YPO0006 IPR023051 Potassium uptake protein, low affinity, Kup YPO0007 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU YPO0007 IPR023064 D-ribose pyranase YPO0007 IPR023750 RbsD-like domain YPO0008 IPR002139 Ribokinase YPO0008 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YPO0008 IPR011611 Carbohydrate kinase PfkB YPO0008 IPR011877 Ribokinase, bacterial YPO0008 IPR029056 Ribokinase-like YPO0009 IPR004638 Drug resistance transporter EmrB/QacA subfamily YPO0009 IPR011701 Major facilitator superfamily YPO0009 IPR020846 Major facilitator superfamily domain YPO0010 IPR000524 Transcription regulator HTH, GntR YPO0010 IPR008920 Transcription regulator FadR/GntR, C-terminal YPO0010 IPR011711 GntR, C-terminal YPO0010 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0011 IPR001207 Transposase, mutator type YPO0012 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain YPO0012 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0013 IPR013482 Molybdenum cofactor guanylyltransferase YPO0013 IPR025877 MobA-like NTP transferase domain YPO0013 IPR029044 Nucleotide-diphospho-sugar transferases YPO0013a IPR009383 Protein of unknown function DUF1040 YPO0014 IPR002575 Aminoglycoside phosphotransferase YPO0014 IPR011009 Protein kinase-like domain YPO0014 IPR032882 YPO0014 YPO0015 IPR001853 DSBA-like thioredoxin domain YPO0015 IPR012336 Thioredoxin-like fold YPO0015 IPR017937 Thioredoxin, conserved site YPO0015 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL YPO0017 IPR001098 DNA-directed DNA polymerase, family A, palm domain YPO0017 IPR002298 DNA polymerase A YPO0017 IPR002421 5'-3' exonuclease, N-terminal YPO0017 IPR002562 3'-5' exonuclease domain YPO0017 IPR008918 Helix-hairpin-helix motif, class 2 YPO0017 IPR012337 Ribonuclease H-like domain YPO0017 IPR018320 DNA polymerase 1 YPO0017 IPR019760 DNA-directed DNA polymerase, family A, conserved site YPO0017 IPR020045 5'-3' exonuclease, C-terminal domain YPO0017 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal YPO0017 IPR029060 PIN domain-like YPO0018 IPR002686 Transposase IS200-like YPO0019 IPR006073 GTP binding domain YPO0019 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC YPO0019 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0020 IPR007336 Der GTPase activator YPO0021 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN YPO0021 IPR006638 Elongator protein 3/MiaB/NifB YPO0021 IPR007197 Radical SAM YPO0021 IPR010723 HemN, C-terminal domain YPO0021 IPR023404 Radical SAM, alpha/beta horseshoe YPO0022 IPR001789 Signal transduction response regulator, receiver domain YPO0022 IPR002078 RNA polymerase sigma factor 54 interaction domain YPO0022 IPR002197 DNA binding HTH domain, Fis-type YPO0022 IPR003593 AAA+ ATPase domain YPO0022 IPR009057 Homeodomain-like YPO0022 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) YPO0022 IPR011006 CheY-like superfamily YPO0022 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YPO0022 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPO0022 IPR025944 Sigma-54 interaction domain, conserved site YPO0022 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0023 IPR000014 PAS domain YPO0023 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO0023 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPO0023 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPO0023 IPR013767 PAS fold YPO0024 IPR001637 Glutamine synthetase class-I, adenylation site YPO0024 IPR004809 Glutamine synthetase type I YPO0024 IPR008146 Glutamine synthetase, catalytic domain YPO0024 IPR008147 Glutamine synthetase, beta-Grasp YPO0024 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain YPO0024 IPR027302 Glutamine synthetase, N-terminal conserved site YPO0024 IPR027303 Glutamine synthetase, glycine-rich site YPO0026 IPR000640 Translation elongation factor EFG, V domain YPO0026 IPR000795 Elongation factor, GTP-binding domain YPO0026 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 YPO0026 IPR005225 Small GTP-binding protein domain YPO0026 IPR006298 GTP-binding protein TypA YPO0026 IPR009000 Translation protein, beta-barrel domain YPO0026 IPR009022 Elongation factor G, III-V domain YPO0026 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0026 IPR031157 YPO0026 YPO0027 IPR006439 HAD hydrolase, subfamily IA YPO0027 IPR023198 Phosphoglycolate phosphatase, domain 2 YPO0027 IPR023214 HAD-like domain YPO0028 IPR017039 Virulence factor BrkB YPO0028 IPR023679 Uncharacterised protein family UPF0761, bacterial YPO0029 IPR003732 D-tyrosyl-tRNA(Tyr) deacylase YPO0029 IPR023509 D-Tyr tRNAtyr deacylase-like domain YPO0030 IPR001270 ClpA/B family YPO0030 IPR002611 IstB-like ATP-binding protein YPO0030 IPR003593 AAA+ ATPase domain YPO0030 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0030 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO0031 IPR001584 Integrase, catalytic core YPO0031 IPR006120 Resolvase, HTH domain YPO0031 IPR009057 Homeodomain-like YPO0031 IPR012337 Ribonuclease H-like domain YPO0032 IPR000182 GNAT domain YPO0032 IPR012660 Thioesterase, putative YPO0032 IPR016181 Acyl-CoA N-acyltransferase YPO0032 IPR029069 HotDog domain YPO0034 IPR006042 Xanthine/uracil permease YPO0034 IPR006043 Xanthine/uracil/vitamin C permease YPO0034 IPR017588 Xanthine permease YPO0035 IPR004445 Sodium/glutamate symporter YPO0036 IPR001650 Helicase, C-terminal YPO0036 IPR004609 ATP-dependent DNA helicase RecG YPO0036 IPR011545 DEAD/DEAH box helicase domain YPO0036 IPR012340 Nucleic acid-binding, OB-fold YPO0036 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YPO0036 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0036 IPR033454 YPO0036 YPO0037 IPR001537 tRNA/rRNA methyltransferase, SpoU type YPO0037 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal YPO0037 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPO0037 IPR029028 Alpha/beta knot methyltransferases YPO0038 IPR002912 ACT domain YPO0038 IPR003607 HD/PDEase domain YPO0038 IPR004095 TGS YPO0038 IPR004811 RelA/SpoT family YPO0038 IPR007685 RelA/SpoT YPO0038 IPR012675 Beta-grasp domain YPO0038 IPR012676 TGS-like YPO0039 IPR003716 DNA-directed RNA polymerase, omega subunit YPO0039 IPR006110 RNA polymerase, subunit omega/K/RPB6 YPO0039 IPR012293 RNA polymerase subunit, RPB6/omega YPO0040 IPR008145 Guanylate kinase/L-type calcium channel beta subunit YPO0040 IPR017665 Guanylate kinase YPO0040 IPR020590 Guanylate kinase, conserved site YPO0040 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0041 IPR004150 NAD-dependent DNA ligase, OB-fold YPO0041 IPR010994 RuvA domain 2-like YPO0041 IPR012340 Nucleic acid-binding, OB-fold YPO0041 IPR013839 NAD-dependent DNA ligase, adenylation YPO0041 IPR013840 NAD-dependent DNA ligase, N-terminal YPO0041 IPR020923 DNA ligase B YPO0042 IPR005115 Uncharacterised domain UPF0126 YPO0043 IPR005229 Conserved hypothetical protein CHP00255 YPO0043 IPR013527 YicC-like, N-terminal YPO0043 IPR013551 Domain of unknown function DUF1732 YPO0044 IPR001247 Exoribonuclease, phosphorolytic domain 1 YPO0044 IPR002381 Ribonuclease phosphorolytic, bacterial-type YPO0044 IPR015847 Exoribonuclease, phosphorolytic domain 2 YPO0044 IPR018336 Ribonuclease PH, conserved site YPO0044 IPR020568 Ribosomal protein S5 domain 2-type fold YPO0044 IPR027408 PNPase/RNase PH domain YPO0045 IPR000836 Phosphoribosyltransferase domain YPO0045 IPR004467 Orotate phosphoribosyl transferase domain YPO0045 IPR023031 Orotate phosphoribosyltransferase YPO0045 IPR029057 Phosphoribosyltransferase-like YPO0046 IPR001647 DNA-binding HTH domain, TetR-type YPO0046 IPR009057 Homeodomain-like YPO0046 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal YPO0046 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal YPO0046 IPR023769 Nucleoid occlusion factor SlmA YPO0046 IPR023772 DNA-binding HTH domain, TetR-type, conserved site YPO0047 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase YPO0047 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase YPO0047 IPR029054 dUTPase-like YPO0048 IPR003382 Flavoprotein YPO0048 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC YPO0048 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal YPO0049 IPR001405 RadC protein YPO0049 IPR010994 RuvA domain 2-like YPO0049 IPR020891 Uncharacterised protein family UPF0758, conserved site YPO0049 IPR022820 Uncharacterised protein family UPF0758, YicR subfamily YPO0049 IPR025657 RadC-like JAB domain YPO0050 IPR001383 Ribosomal protein L28 YPO0050 IPR026569 Ribosomal protein L28/L24 YPO0051 IPR001705 Ribosomal protein L33 YPO0051 IPR011332 Zinc-binding ribosomal protein YPO0051 IPR018264 Ribosomal protein L33, conserved site YPO0052 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase YPO0052 IPR010979 Ribosomal protein S13-like, H2TH YPO0052 IPR012319 DNA glycosylase/AP lyase, catalytic domain YPO0052 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding YPO0052 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site YPO0052 IPR020629 Formamidopyrimidine-DNA glycosylase YPO0053 IPR001980 Coenzyme A biosynthesis protein YPO0053 IPR004821 Cytidyltransferase-like domain YPO0053 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO0054 IPR001173 Glycosyltransferase 2-like YPO0054 IPR029044 Nucleotide-diphospho-sugar transferases YPO0055 IPR001296 Glycosyl transferase, family 1 YPO0055 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal YPO0056 IPR002201 Glycosyl transferase, family 9 YPO0056 IPR011908 Lipopolysaccharide heptosyltransferase I YPO0057 IPR002201 Glycosyl transferase, family 9 YPO0057 IPR011910 Lipopolysaccharide heptosyltransferase II YPO0058 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain YPO0058 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase YPO0058 IPR016040 NAD(P)-binding domain YPO0059 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site YPO0059 IPR004839 Aminotransferase, class I/classII YPO0059 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase YPO0059 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPO0059 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPO0059 IPR015424 Pyridoxal phosphate-dependent transferase YPO0060 IPR002085 Alcohol dehydrogenase superfamily, zinc-type YPO0060 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site YPO0060 IPR004627 L-threonine 3-dehydrogenase YPO0060 IPR011032 GroES (chaperonin 10)-like YPO0060 IPR013149 Alcohol dehydrogenase, C-terminal YPO0060 IPR013154 Alcohol dehydrogenase GroES-like YPO0060 IPR016040 NAD(P)-binding domain YPO0060 IPR020843 Polyketide synthase, enoylreductase YPO0063 IPR011055 Duplicated hybrid motif YPO0063 IPR016047 Peptidase M23 YPO0064 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent YPO0064 IPR006124 Metalloenzyme YPO0064 IPR011258 BPG-independent PGAM, N-terminal YPO0064 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha YPO0064 IPR017850 Alkaline-phosphatase-like, core domain YPO0065 IPR001763 Rhodanese-like domain YPO0066 IPR002109 Glutaredoxin YPO0066 IPR011767 Glutaredoxin active site YPO0066 IPR011900 Glutaredoxin, GrxC YPO0066 IPR012336 Thioredoxin-like fold YPO0066 IPR014025 Glutaredoxin subgroup YPO0067 IPR003708 Bacterial protein export chaperone SecB YPO0068 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal YPO0068 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent YPO0068 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YPO0068 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal YPO0068 IPR013328 Dehydrogenase, multihelical YPO0068 IPR016040 NAD(P)-binding domain YPO0068 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPO0070 IPR001451 Bacterial transferase hexapeptide repeat YPO0070 IPR005881 Serine O-acetyltransferase YPO0070 IPR010493 Serine acetyltransferase, N-terminal YPO0070 IPR011004 Trimeric LpxA-like YPO0070 IPR018357 Hexapeptide transferase, conserved site YPO0071 IPR001537 tRNA/rRNA methyltransferase, SpoU type YPO0071 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase YPO0071 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPO0071 IPR029028 Alpha/beta knot methyltransferases YPO0072 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site YPO0072 IPR004026 Ada DNA repair, metal-binding YPO0072 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain YPO0072 IPR009057 Homeodomain-like YPO0072 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0072 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding YPO0072 IPR016221 Bifunctional regulatory protein Ada YPO0072 IPR018060 DNA binding HTH domain, AraC-type YPO0073 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO0073 IPR003660 HAMP linker domain YPO0073 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPO0073 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPO0073 IPR032404 YPO0073 YPO0074 IPR001789 Signal transduction response regulator, receiver domain YPO0074 IPR001867 Signal transduction response regulator, C-terminal YPO0074 IPR011006 CheY-like superfamily YPO0074 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0075 IPR012899 LTXXQ motif family protein YPO0076 IPR006842 Transposase (putative), YhgA-like YPO0076 IPR010106 Conserved hypothetical protein CHP01784 YPO0077 IPR002524 Cation efflux protein YPO0077 IPR023783 Cation efflux pump FieF YPO0077 IPR027469 Cation efflux protein transmembrane domain YPO0077 IPR027470 Cation efflux protein cytoplasmic domain YPO0078 IPR000023 Phosphofructokinase domain YPO0078 IPR012003 ATP-dependent phosphofructokinase, prokaryotic-type YPO0078 IPR012828 6-phosphofructokinase YPO0078 IPR015912 Phosphofructokinase, conserved site YPO0078 IPR022953 Phosphofructokinase YPO0079 IPR000957 Sulphate/thiosulphate-binding, conserved site YPO0079 IPR005669 Thiosulphate/Sulfate-binding protein YPO0081 IPR001898 Sodium/sulphate symporter YPO0081 IPR030676 YPO0081 YPO0082 IPR005493 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase YPO0082 IPR014165 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase YPO0083 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related YPO0083 IPR024078 Putative deacetylase LmbE-like domain YPO0084 IPR000847 Transcription regulator HTH, LysR YPO0084 IPR005119 LysR, substrate-binding YPO0084 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0085 IPR000652 Triosephosphate isomerase YPO0085 IPR013785 Aldolase-type TIM barrel YPO0085 IPR020861 Triosephosphate isomerase, active site YPO0085 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic YPO0086 IPR009918 Protein of unknown function DUF1454 YPO0087 IPR008523 Lactobacillus phage LBR48, DUF805 YPO0088 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPO0088 IPR008333 Oxidoreductase, FAD-binding domain YPO0088 IPR017938 Riboflavin synthase-like beta-barrel YPO0089 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase YPO0090 IPR018483 Carbohydrate kinase, FGGY, conserved site YPO0090 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPO0090 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPO0091 IPR000425 Major intrinsic protein YPO0091 IPR022357 Major intrinsic protein, conserved site YPO0091 IPR023271 Aquaporin-like YPO0093 IPR009252 Cell division protein ZapB YPO0094 IPR002686 Transposase IS200-like YPO0096 IPR001270 ClpA/B family YPO0096 IPR002611 IstB-like ATP-binding protein YPO0096 IPR003593 AAA+ ATPase domain YPO0096 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0096 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO0097 IPR001584 Integrase, catalytic core YPO0097 IPR006120 Resolvase, HTH domain YPO0097 IPR009057 Homeodomain-like YPO0097 IPR012337 Ribonuclease H-like domain YPO0099 IPR003997 RTX secretion protein D, Gram-negative bacteria YPO0099 IPR006144 Secretion protein HlyD, conserved site YPO0099 IPR011053 Single hybrid motif YPO0102 IPR025326 Protein of unknown function DUF4232 YPO0103 IPR005493 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase YPO0103 IPR010203 Regulator of ribonuclease activity A YPO0103 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria YPO0104 IPR000537 UbiA prenyltransferase family YPO0104 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase YPO0104 IPR026046 UbiA prenyltransferase domain containing protein 1 YPO0105 IPR003593 AAA+ ATPase domain YPO0105 IPR003959 ATPase, AAA-type, core YPO0105 IPR004491 Heat shock protein HslU YPO0105 IPR019489 Clp ATPase, C-terminal YPO0105 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0106 IPR001353 Proteasome, subunit alpha/beta YPO0106 IPR022281 ATP-dependent protease, HslV subunit YPO0106 IPR029055 Nucleophile aminohydrolases, N-terminal YPO0107 IPR007730 Sporulation-related domain YPO0107 IPR011930 Cell division protein FtsN YPO0108 IPR000843 Transcription regulator HTH, LacI YPO0108 IPR010982 Lambda repressor-like, DNA-binding domain YPO0108 IPR028082 Periplasmic binding protein-like I YPO0110 IPR001650 Helicase, C-terminal YPO0110 IPR005259 Primosomal protein n YPO0110 IPR011545 DEAD/DEAH box helicase domain YPO0110 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YPO0110 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0111 IPR002150 Ribosomal protein L31 YPO0111 IPR027491 Ribosomal protein L31 type A YPO0112 IPR008024 YiaAB two helix YPO0114 IPR002084 Methionine repressor MetJ YPO0114 IPR010985 Ribbon-helix-helix YPO0114 IPR023453 Methionine repressor MetJ domain YPO0116 IPR001048 Aspartate/glutamate/uridylate kinase YPO0116 IPR001341 Aspartate kinase domain YPO0116 IPR001342 Homoserine dehydrogenase, catalytic YPO0116 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding YPO0116 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I YPO0116 IPR016040 NAD(P)-binding domain YPO0116 IPR018042 Aspartate kinase, conserved site YPO0116 IPR019811 Homoserine dehydrogenase, conserved site YPO0117 IPR003171 Methylenetetrahydrofolate reductase YPO0117 IPR004620 5,10-methylenetetrahydrofolate reductase YPO0117 IPR029041 FAD-linked oxidoreductase-like YPO0118 IPR001584 Integrase, catalytic core YPO0118 IPR012337 Ribonuclease H-like domain YPO0118 IPR025948 HTH-like domain YPO0119 IPR009057 Homeodomain-like YPO0119 IPR010921 Trp repressor/replication initiator YPO0119 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0120 IPR001034 HTH DeoR N-terminal domain YPO0120 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0120 IPR014036 DeoR C-terminal sensor domain YPO0120 IPR018356 Transcription regulator, HTH DeoR-type, conserved site YPO0121 IPR002610 Peptidase S54, rhomboid YPO0121 IPR022732 Peptidase S54, GlpG peptidase, N-terminal YPO0121 IPR022764 Peptidase S54, rhomboid domain YPO0121 IPR023662 Rhomboid protease GlpG YPO0122 IPR001763 Rhodanese-like domain YPO0122 IPR023695 Thiosulfate sulfurtransferase, bacterial YPO0123 IPR000792 Transcription regulator LuxR, C-terminal YPO0123 IPR011990 Tetratricopeptide-like helical domain YPO0123 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0123 IPR016032 Signal transduction response regulator, C-terminal effector YPO0123 IPR023768 Transcriptional regulator HTH-type, MalT YPO0123 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0126 IPR003385 Glycoside hydrolase, family 77 YPO0126 IPR013781 Glycoside hydrolase, catalytic domain YPO0126 IPR017853 Glycoside hydrolase, superfamily YPO0127 IPR000361 FeS cluster biogenesis YPO0127 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal YPO0127 IPR017726 Fe/S biogenesis protein NfuA YPO0128 IPR000836 Phosphoribosyltransferase domain YPO0128 IPR029057 Phosphoribosyltransferase-like YPO0129 IPR000073 Alpha/beta hydrolase fold-1 YPO0129 IPR010076 Pimelyl-[acyl-carrier protein] methyl ester esterase YPO0129 IPR029058 Alpha/Beta hydrolase fold YPO0130 IPR010854 Domain of unknown function DUF1471 YPO0130 IPR025543 Dodecin-like YPO0131 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0131 IPR015102 Transcriptional regulator HTH-type, FeoC YPO0131 IPR023732 Ferrous iron transport protein C YPO0132 IPR003373 Ferrous iron transport protein B YPO0132 IPR005225 Small GTP-binding protein domain YPO0132 IPR011619 Ferrous iron transport protein B, N-terminal YPO0132 IPR011640 Ferrous iron transport protein B, C-terminal YPO0132 IPR011642 Nucleoside recognition Gate YPO0132 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0133 IPR007167 Ferrous iron transporter FeoA domain YPO0133 IPR008988 Transcriptional repressor, C-terminal YPO0134 IPR003029 Ribosomal protein S1, RNA-binding domain YPO0134 IPR006641 YqgF/RNase H-like domain YPO0134 IPR010994 RuvA domain 2-like YPO0134 IPR012337 Ribonuclease H-like domain YPO0134 IPR012340 Nucleic acid-binding, OB-fold YPO0134 IPR018974 Tex-like protein, N-terminal YPO0134 IPR022967 RNA-binding domain, S1 YPO0134 IPR023097 Tex RuvX-like domain YPO0134 IPR023319 Tex-like protein, HTH domain YPO0134 IPR023323 Tex-like domain YPO0134 IPR032639 YPO0134 YPO0135 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal YPO0135 IPR006358 Transcription elongation factor GreB YPO0135 IPR018151 Transcription elongation factor, GreA/GreB, conserved site YPO0135 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal YPO0135 IPR023459 Transcription elongation factor GreA/GreB family YPO0135 IPR028624 Transcription elongation factor GreA/GreB YPO0136 IPR001789 Signal transduction response regulator, receiver domain YPO0136 IPR001867 Signal transduction response regulator, C-terminal YPO0136 IPR011006 CheY-like superfamily YPO0136 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0136 IPR016032 Signal transduction response regulator, C-terminal effector YPO0137 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO0137 IPR003660 HAMP linker domain YPO0137 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPO0137 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPO0138 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising YPO0138 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal YPO0138 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal YPO0138 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site YPO0139 IPR000397 Heat shock protein Hsp33 YPO0139 IPR016153 Heat shock protein Hsp33, N-terminal YPO0139 IPR016154 Heat shock protein Hsp33, C-terminal YPO0139 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain YPO0140 IPR002942 RNA-binding S4 domain YPO0140 IPR025708 Heat shock protein 15 YPO0141 IPR006439 HAD hydrolase, subfamily IA YPO0141 IPR023214 HAD-like domain YPO0142 IPR010771 Intracellular growth attenuator IgaA YPO0144 IPR000086 NUDIX hydrolase domain YPO0144 IPR015797 NUDIX hydrolase domain-like YPO0144 IPR020084 NUDIX hydrolase, conserved site YPO0145 IPR001264 Glycosyl transferase, family 51 YPO0145 IPR001460 Penicillin-binding protein, transpeptidase YPO0145 IPR012338 Beta-lactamase/transpeptidase-like YPO0145 IPR012340 Nucleic acid-binding, OB-fold YPO0145 IPR023346 Lysozyme-like domain YPO0145 IPR031376 YPO0145 YPO0146 IPR005883 Type IV pilus assembly protein PilM YPO0147 IPR007813 Fimbrial assembly PilN YPO0149 IPR019684 Protein of unknown function DUF2531 YPO0150 IPR001775 GspD/PilQ family YPO0150 IPR004846 Type II/III secretion system YPO0150 IPR005644 NolW-like YPO0150 IPR013355 Type IV pilus secretin PilQ YPO0151 IPR000623 Shikimate kinase/Threonine synthase-like 1 YPO0151 IPR023000 Shikimate kinase, conserved site YPO0151 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0151 IPR031322 YPO0151 YPO0152 IPR016037 3-dehydroquinate synthase AroB YPO0152 IPR030960 YPO0152 YPO0152 IPR030963 YPO0152 YPO0153 IPR007730 Sporulation-related domain YPO0153 IPR032899 YPO0153 YPO0154 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPO0154 IPR012263 Adenine modification methylase, M.EcoRV-type YPO0154 IPR012327 D12 class N6 adenine-specific DNA methyltransferase YPO0154 IPR023095 Adenine-specific methyltransferase, domain 2 YPO0154 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPO0155 IPR000056 Ribulose-phosphate 3-epimerase-like YPO0155 IPR011060 Ribulose-phosphate binding barrel YPO0155 IPR013785 Aldolase-type TIM barrel YPO0155 IPR026019 Ribulose-phosphate 3-epimerase YPO0156 IPR006346 2-phosphoglycolate phosphatase, prokaryotic YPO0156 IPR006439 HAD hydrolase, subfamily IA YPO0156 IPR023198 Phosphoglycolate phosphatase, domain 2 YPO0156 IPR023214 HAD-like domain YPO0157 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPO0157 IPR002305 Aminoacyl-tRNA synthetase, class Ic YPO0157 IPR002306 Tryptophan-tRNA ligase YPO0157 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO0157 IPR024109 Tryptophan-tRNA ligase, bacterial-type YPO0158 IPR000878 Tetrapyrrole methylase YPO0158 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site YPO0158 IPR006366 Uroporphyrin-III C-methyltransferase YPO0158 IPR006367 Sirohaem synthase, N-terminal YPO0158 IPR012409 Sirohaem synthase YPO0158 IPR014776 Tetrapyrrole methylase, subdomain 2 YPO0158 IPR014777 Tetrapyrrole methylase, subdomain 1 YPO0158 IPR016040 NAD(P)-binding domain YPO0158 IPR019478 Sirohaem synthase, dimerisation domain YPO0158 IPR028281 Siroheme synthase, central domain YPO0159 IPR000292 Formate/nitrite transporter YPO0159 IPR023271 Aquaporin-like YPO0159 IPR024002 Formate/nitrite transporter, conserved site YPO0160 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD YPO0160 IPR017941 Rieske [2Fe-2S] iron-sulphur domain YPO0161 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain YPO0161 IPR006066 Nitrite/sulphite reductase iron-sulphur/siroheam-binding site YPO0161 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain YPO0161 IPR007419 BFD-like [2Fe-2S]-binding domain YPO0161 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB YPO0161 IPR017121 Nitrite reductase [NAD(P)H], large subunit YPO0161 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPO0162 IPR011059 Metal-dependent hydrolase, composite domain YPO0162 IPR013108 Amidohydrolase 3 YPO0162 IPR032466 YPO0162 YPO0163 IPR011701 Major facilitator superfamily YPO0163 IPR020846 Major facilitator superfamily domain YPO0163 IPR023528 Major facilitator superfamily transporter, TsgA YPO0164 IPR000531 TonB-dependent receptor, beta-barrel YPO0164 IPR010100 TonB-dependent copper receptor YPO0164 IPR012910 TonB-dependent receptor, plug YPO0165 IPR000843 Transcription regulator HTH, LacI YPO0165 IPR010982 Lambda repressor-like, DNA-binding domain YPO0165 IPR028082 Periplasmic binding protein-like I YPO0166 IPR001088 Glycoside hydrolase, family 4 YPO0166 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal YPO0166 IPR016040 NAD(P)-binding domain YPO0166 IPR019802 Glycoside hydrolase, family 4, conserved site YPO0166 IPR022616 Glycosyl hydrolase, family 4, C-terminal YPO0167 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain YPO0167 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site YPO0167 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase YPO0167 IPR029000 Cyclophilin-like domain YPO0168 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0168 IPR033186 YPO0168 YPO0169 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain YPO0169 IPR017926 Glutamine amidotransferase YPO0169 IPR029062 Class I glutamine amidotransferase-like YPO0171 IPR001584 Integrase, catalytic core YPO0171 IPR006120 Resolvase, HTH domain YPO0171 IPR009057 Homeodomain-like YPO0171 IPR012337 Ribonuclease H-like domain YPO0172 IPR001270 ClpA/B family YPO0172 IPR002611 IstB-like ATP-binding protein YPO0172 IPR003593 AAA+ ATPase domain YPO0172 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0172 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO0174 IPR010020 Integral membrane protein, YccS/YhfK YPO0174 IPR032692 YPO0174 YPO0175 IPR000595 Cyclic nucleotide-binding domain YPO0175 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0175 IPR012318 Helix-turn-helix motif, Crp-type YPO0175 IPR014710 RmlC-like jelly roll fold YPO0175 IPR018335 Transcription regulator HTH, Crp-type, conserved site YPO0175 IPR018488 Cyclic nucleotide-binding, conserved site YPO0175 IPR018490 Cyclic nucleotide-binding-like YPO0176 IPR003718 OsmC/Ohr family YPO0176 IPR015946 K homology domain-like, alpha/beta YPO0177 IPR010665 Protein of unknown function DUF1240 YPO0178 IPR006082 Phosphoribulokinase YPO0178 IPR006083 Phosphoribulokinase/uridine kinase YPO0178 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0179 IPR010648 Uncharacterised protein family UPF0270 YPO0180 IPR000073 Alpha/beta hydrolase fold-1 YPO0180 IPR000952 Uncharacterised protein family UPF0017, hydrolase-like, conserved site YPO0180 IPR012020 AB-hydrolase YheT, putative YPO0180 IPR029058 Alpha/Beta hydrolase fold YPO0181 IPR001123 Lysine-type exporter protein (LYSE/YGGA) YPO0182 IPR001638 Extracellular solute-binding protein, family 3 YPO0182 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain YPO0182 IPR010068 Taurine ABC transporter, periplasmic binding protein TauA YPO0183 IPR003439 ABC transporter-like YPO0183 IPR003593 AAA+ ATPase domain YPO0183 IPR017871 ABC transporter, conserved site YPO0183 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0184 IPR000515 MetI-like domain YPO0185 IPR003819 Taurine catabolism dioxygenase TauD/TfdA YPO0186 IPR002201 Glycosyl transferase, family 9 YPO0187 IPR001173 Glycosyltransferase 2-like YPO0187 IPR029044 Nucleotide-diphospho-sugar transferases YPO0190 IPR003680 Flavodoxin-like fold YPO0190 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG YPO0190 IPR029039 Flavoprotein-like YPO0191 IPR003148 Regulator of K+ conductance, N-terminal YPO0191 IPR004771 K+/H+ exchanger YPO0191 IPR006153 Cation/H+ exchanger YPO0191 IPR016040 NAD(P)-binding domain YPO0191 IPR020884 Glutathione-regulated potassium-efflux system protein KefB YPO0192 IPR012658 Conserved hypothetical protein CHP02443 YPO0192 IPR013088 Zinc finger, NHR/GATA-type YPO0193 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain YPO0193 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type YPO0194 IPR007236 SlyX YPO0195 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal YPO0195 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain YPO0195 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type YPO0196 IPR013559 YheO-like YPO0197 IPR003787 Sulphur relay, DsrE/F-like protein YPO0197 IPR017463 Sulphur relay, TusD/DsrE YPO0197 IPR027396 DsrEFH-like YPO0198 IPR003787 Sulphur relay, DsrE/F-like protein YPO0198 IPR017462 Sulphur relay, TusC/DsrF YPO0198 IPR027396 DsrEFH-like YPO0199 IPR007215 Sulphur relay, TusB/DsrH YPO0199 IPR023526 Sulphur relay, TusB YPO0199 IPR027396 DsrEFH-like YPO0200 IPR005679 Ribosomal protein S12, bacteria YPO0200 IPR006032 Ribosomal protein S12/S23 YPO0200 IPR012340 Nucleic acid-binding, OB-fold YPO0201 IPR000235 Ribosomal protein S5/S7 YPO0201 IPR005717 Ribosomal protein S7, bacterial/organellar-type YPO0201 IPR020606 Ribosomal protein S7, conserved site YPO0201 IPR023798 Ribosomal protein S7 domain YPO0202 IPR000640 Translation elongation factor EFG, V domain YPO0202 IPR000795 Elongation factor, GTP-binding domain YPO0202 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 YPO0202 IPR004540 Translation elongation factor EFG/EF2 YPO0202 IPR005225 Small GTP-binding protein domain YPO0202 IPR005517 Translation elongation factor EFG/EF2, domain IV YPO0202 IPR009000 Translation protein, beta-barrel domain YPO0202 IPR009022 Elongation factor G, III-V domain YPO0202 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPO0202 IPR020568 Ribosomal protein S5 domain 2-type fold YPO0202 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0202 IPR031157 YPO0202 YPO0203 IPR000795 Elongation factor, GTP-binding domain YPO0203 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal YPO0203 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 YPO0203 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle YPO0203 IPR005225 Small GTP-binding protein domain YPO0203 IPR009000 Translation protein, beta-barrel domain YPO0203 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal YPO0203 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0203 IPR031157 YPO0203 YPO0204 IPR002686 Transposase IS200-like YPO0205 IPR007419 BFD-like [2Fe-2S]-binding domain YPO0206 IPR002024 Bacterioferritin YPO0206 IPR008331 Ferritin/DPS protein domain YPO0206 IPR009078 Ferritin-like superfamily YPO0206 IPR012347 Ferritin-related YPO0209 IPR001848 Ribosomal protein S10 YPO0209 IPR018268 Ribosomal protein S10, conserved site YPO0209 IPR027486 Ribosomal protein S10 domain YPO0210 IPR000597 Ribosomal protein L3 YPO0210 IPR009000 Translation protein, beta-barrel domain YPO0210 IPR019926 Ribosomal protein L3, conserved site YPO0210 IPR019927 Ribosomal protein L3, bacterial/organelle-type YPO0211 IPR002136 Ribosomal protein L4/L1e YPO0211 IPR013005 Ribosomal protein L4/L1e, bacterial-type YPO0211 IPR023574 Ribosomal protein L4 domain YPO0212 IPR001014 Ribosomal protein L23/L25, conserved site YPO0212 IPR012677 Nucleotide-binding, alpha-beta plait YPO0212 IPR012678 Ribosomal protein L23/L15e core domain YPO0212 IPR013025 Ribosomal protein L25/L23 YPO0213 IPR002171 Ribosomal protein L2 YPO0213 IPR005880 Ribosomal protein L2, bacterial/organellar-type YPO0213 IPR008991 Translation protein SH3-like domain YPO0213 IPR012340 Nucleic acid-binding, OB-fold YPO0213 IPR014722 Ribosomal protein L2 domain 2 YPO0213 IPR014726 Ribosomal protein L2, domain 3 YPO0213 IPR022666 Ribosomal Proteins L2, RNA binding domain YPO0213 IPR022669 Ribosomal protein L2, C-terminal YPO0213 IPR022671 Ribosomal protein L2, conserved site YPO0214 IPR002222 Ribosomal protein S19/S15 YPO0214 IPR005732 Ribosomal protein S19, bacterial-type YPO0214 IPR020934 Ribosomal protein S19 conserved site YPO0214 IPR023575 Ribosomal protein S19, superfamily YPO0215 IPR001063 Ribosomal protein L22/L17 YPO0215 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type YPO0215 IPR018260 Ribosomal protein L22/L17, conserved site YPO0216 IPR001351 Ribosomal protein S3, C-terminal YPO0216 IPR004044 K Homology domain, type 2 YPO0216 IPR004087 K Homology domain YPO0216 IPR005704 Ribosomal protein S3, bacterial YPO0216 IPR009019 K homology domain, prokaryotic type YPO0216 IPR015946 K homology domain-like, alpha/beta YPO0216 IPR018280 Ribosomal protein S3, conserved site YPO0217 IPR000114 Ribosomal protein L16 YPO0217 IPR016180 Ribosomal protein L10e/L16 YPO0217 IPR020798 Ribosomal protein L16, conserved site YPO0218 IPR001854 Ribosomal protein L29 YPO0218 IPR018254 Ribosomal protein L29, conserved site YPO0219 IPR000266 Ribosomal protein S17 YPO0219 IPR012340 Nucleic acid-binding, OB-fold YPO0219 IPR019979 Ribosomal protein S17, conserved site YPO0219 IPR019984 Ribosomal protein S17, bacterial-type YPO0220 IPR000218 Ribosomal protein L14b/L23e YPO0220 IPR005745 Ribosomal protein L14, bacterial-type YPO0220 IPR019972 Ribosomal protein L14 conserved site YPO0221 IPR003256 Ribosomal protein L24 YPO0221 IPR005824 KOW YPO0221 IPR005825 Ribosomal protein L24/L26, conserved site YPO0221 IPR008991 Translation protein SH3-like domain YPO0221 IPR014722 Ribosomal protein L2 domain 2 YPO0222 IPR002132 Ribosomal protein L5 YPO0222 IPR020930 Ribosomal protein L5, bacterial-type YPO0222 IPR022803 Ribosomal protein L5 domain YPO0222 IPR031309 YPO0222 YPO0222 IPR031310 YPO0222 YPO0222a IPR001209 Ribosomal protein S14 YPO0222a IPR018271 Ribosomal protein S14, conserved site YPO0222a IPR023036 Ribosomal protein S14, bacterial/plastid YPO0223 IPR000630 Ribosomal protein S8 YPO0224 IPR000702 Ribosomal protein L6 YPO0224 IPR002358 Ribosomal protein L6, conserved site YPO0224 IPR019906 Ribosomal protein L6, bacterial-type YPO0224 IPR020040 Ribosomal protein L6, alpha-beta domain YPO0225 IPR004389 Ribosomal protein L18, bacterial-type YPO0225 IPR005484 Ribosomal protein L18/L5 YPO0226 IPR000851 Ribosomal protein S5 YPO0226 IPR005324 Ribosomal protein S5, C-terminal YPO0226 IPR005712 Ribosomal protein S5, bacterial-type YPO0226 IPR013810 Ribosomal protein S5, N-terminal YPO0226 IPR014720 Double-stranded RNA-binding domain YPO0226 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPO0226 IPR018192 Ribosomal protein S5, N-terminal, conserved site YPO0226 IPR020568 Ribosomal protein S5 domain 2-type fold YPO0227 IPR005996 Ribosomal protein L30, bacterial-type YPO0227 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain YPO0227 IPR018038 Ribosomal protein L30, conserved site YPO0228 IPR001196 Ribosomal protein L15, conserved site YPO0228 IPR005749 Ribosomal protein L15, bacterial-type YPO0228 IPR021131 Ribosomal protein L18e/L15P YPO0228 IPR030878 YPO0228 YPO0229 IPR002208 SecY/SEC61-alpha family YPO0229 IPR023201 SecY subunit domain YPO0229 IPR026593 Protein translocase subunit SecY YPO0229 IPR030659 YPO0229 YPO0230 IPR000473 Ribosomal protein L36 YPO0231 IPR001892 Ribosomal protein S13 YPO0231 IPR010979 Ribosomal protein S13-like, H2TH YPO0231 IPR018269 Ribosomal protein S13, conserved site YPO0231 IPR019980 Ribosomal protein S13, bacterial-type YPO0231 IPR027437 30s ribosomal protein S13, C-terminal YPO0232 IPR001971 Ribosomal protein S11 YPO0232 IPR018102 Ribosomal S11, conserved site YPO0232 IPR019981 Ribosomal protein S11, bacterial-type YPO0233 IPR001912 Ribosomal protein S4/S9, N-terminal YPO0233 IPR002942 RNA-binding S4 domain YPO0233 IPR005709 Ribosomal protein S4, bacterial-type YPO0233 IPR018079 Ribosomal protein S4, conserved site YPO0233 IPR022801 Ribosomal protein S4/S9 YPO0234 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain YPO0234 IPR011260 RNA polymerase, alpha subunit, C-terminal YPO0234 IPR011262 DNA-directed RNA polymerase, insert domain YPO0234 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type YPO0234 IPR011773 DNA-directed RNA polymerase, alpha subunit YPO0235 IPR000456 Ribosomal protein L17 YPO0236 IPR000551 MerR-type HTH domain YPO0236 IPR009061 DNA binding domain, putative YPO0236 IPR011788 Zn(II)-responsive transcriptional regulator YPO0237 IPR005589 Protein of unknown function DUF331 YPO0238 IPR001185 Large-conductance mechanosensitive channel YPO0238 IPR019823 Large-conductance mechanosensitive channel, conserved site YPO0239 IPR003148 Regulator of K+ conductance, N-terminal YPO0239 IPR006036 Potassium uptake protein TrkA YPO0239 IPR006037 Regulator of K+ conductance, C-terminal YPO0239 IPR016040 NAD(P)-binding domain YPO0240 IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p YPO0240 IPR004573 rRNA small subunit methyltransferase B YPO0240 IPR006027 NusB/RsmB/TIM44 YPO0240 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site YPO0240 IPR023267 RNA (C5-cytosine) methyltransferase YPO0240 IPR023541 rRNA small subunit methyltransferase B, enterobacteriaceae YPO0240 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPO0241 IPR001555 Phosphoribosylglycinamide formyltransferase, active site YPO0241 IPR002376 Formyl transferase, N-terminal YPO0241 IPR005793 Formyl transferase, C-terminal YPO0241 IPR005794 Methionyl-tRNA formyltransferase YPO0241 IPR011034 Formyl transferase, C-terminal-like YPO0242 IPR000181 Formylmethionine deformylase YPO0242 IPR023635 Peptide deformylase YPO0243 IPR003488 DNA recombination-mediator protein A YPO0244 IPR007456 Protein of unknown function DUF494 YPO0245 IPR000380 DNA topoisomerase, type IA YPO0245 IPR013498 DNA topoisomerase, type IA, zn finger YPO0245a IPR006070 YrdC-like domain YPO0245a IPR017945 DHBP synthase RibB-like alpha/beta domain YPO0245a IPR023535 Threonylcarbamoyl-AMP synthase YPO0246 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase YPO0246 IPR011342 Shikimate dehydrogenase YPO0246 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal YPO0246 IPR016040 NAD(P)-binding domain YPO0246 IPR022893 Shikimate, quinate/shikimate dehydrogenase YPO0247 IPR001451 Bacterial transferase hexapeptide repeat YPO0247 IPR011004 Trimeric LpxA-like YPO0248 IPR001270 ClpA/B family YPO0248 IPR002611 IstB-like ATP-binding protein YPO0248 IPR003593 AAA+ ATPase domain YPO0248 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0248 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO0249 IPR001584 Integrase, catalytic core YPO0249 IPR006120 Resolvase, HTH domain YPO0249 IPR009057 Homeodomain-like YPO0249 IPR012337 Ribonuclease H-like domain YPO0250 IPR025890 Abhydrolase, bacterial YPO0250 IPR029058 Alpha/Beta hydrolase fold YPO0251 IPR001734 Sodium/solute symporter YPO0251 IPR014083 Cation/acetate symporter ActP YPO0251 IPR018212 Sodium/solute symporter, conserved site YPO0252 IPR007436 Protein of unknown function DUF485 YPO0253 IPR000873 AMP-dependent synthetase/ligase YPO0253 IPR011904 Acetate-CoA ligase YPO0253 IPR020845 AMP-binding, conserved site YPO0253 IPR025110 AMP-binding enzyme C-terminal domain YPO0253 IPR032387 YPO0253 YPO0254 IPR001991 Sodium:dicarboxylate symporter YPO0254 IPR018107 Sodium:dicarboxylate symporter, conserved site YPO0254 IPR033380 YPO0254 YPO0255 IPR000792 Transcription regulator LuxR, C-terminal YPO0255 IPR001789 Signal transduction response regulator, receiver domain YPO0255 IPR011006 CheY-like superfamily YPO0255 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0255 IPR016032 Signal transduction response regulator, C-terminal effector YPO0256 IPR001789 Signal transduction response regulator, receiver domain YPO0256 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO0256 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPO0256 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPO0256 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain YPO0256 IPR011006 CheY-like superfamily YPO0257 IPR003522 Type III secretion system outer membrane pore YscC/HrcC YPO0257 IPR004845 Type II secretion system GspD, conserved site YPO0257 IPR004846 Type II/III secretion system YPO0257 IPR005644 NolW-like YPO0258 IPR012843 Type III secretion system YscD/HrpQ YPO0258 IPR032034 YPO0258 YPO0259 IPR012671 Type III secretion system, secretion protein E YPO0260a IPR011841 Type III secretion system, needle protein YPO0260a IPR021123 Type III secretion, needle-protein-like YPO0261 IPR010437 Type III secretion system SsaH YPO0262 IPR012670 Type III secretion system, YscI/HrpB YPO0263 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ YPO0263 IPR006182 Secretory protein YscJ/FliF YPO0264 IPR025292 Type III secretion system protein YPO0265 IPR009335 Type III secretion system HrpE /V-type ATP synthase subunit E YPO0265 IPR012842 Type III secretion system HrpE/YscL YPO0266 IPR001712 Type III secretion system FHIPEP YPO0266 IPR006302 Type III secretion protein HrcV YPO0266 IPR025505 FHIPEP conserved site YPO0267 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain YPO0267 IPR003593 AAA+ ATPase domain YPO0267 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain YPO0267 IPR005714 ATPase, type III secretion system, FliI/YscN YPO0267 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site YPO0267 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0269 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb YPO0269 IPR001543 Surface presentation of antigen (SpoA) YPO0269 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO YPO0270 IPR005773 Yop virulence translocation protein R YPO0270 IPR005838 Type III secretion system inner membrane P protein YPO0271 IPR002191 Bacterial export protein family 3 YPO0271 IPR006306 Type III secretion protein HrpO YPO0272 IPR002010 Type III secretion system inner membrane R protein YPO0272 IPR006304 Type III secretion protein SpaR/YscT YPO0273 IPR006135 Type III secretion system substrate exporter YPO0273 IPR006307 Type III exporter system, secretion apparatus protein BsaZ YPO0273 IPR029025 Type III secretion system substrate exporter, C-terminal YPO0274 IPR007272 Sulphur transport domain YPO0275 IPR001455 TusA-like domain YPO0276 IPR000847 Transcription regulator HTH, LysR YPO0276 IPR005119 LysR, substrate-binding YPO0276 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0278 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme YPO0278 IPR006233 Cystathionine beta-lyase, bacterial YPO0278 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPO0278 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPO0278 IPR015424 Pyridoxal phosphate-dependent transferase YPO0279 IPR003439 ABC transporter-like YPO0279 IPR003593 AAA+ ATPase domain YPO0279 IPR017871 ABC transporter, conserved site YPO0279 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0280 IPR000522 ABC transporter, permease protein YPO0280 IPR029022 ABC transporter, BtuC-like YPO0281 IPR002491 ABC transporter periplasmic binding domain YPO0282 IPR007845 Haemin-degrading HemS/ChuX domain YPO0283 IPR000531 TonB-dependent receptor, beta-barrel YPO0283 IPR010916 TonB box, conserved site YPO0283 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor YPO0283 IPR011276 TonB-dependent haem/haemoglobin receptor YPO0283 IPR012910 TonB-dependent receptor, plug YPO0284 IPR016040 NAD(P)-binding domain YPO0285 IPR010413 Heme utilization carrier protein HutX like YPO0286 IPR006638 Elongator protein 3/MiaB/NifB YPO0286 IPR007197 Radical SAM YPO0286 IPR023404 Radical SAM, alpha/beta horseshoe YPO0286 IPR026332 Putative heme utilization radical SAM enzyme HutW YPO0287 IPR003171 Methylenetetrahydrofolate reductase YPO0287 IPR029041 FAD-linked oxidoreductase-like YPO0288 IPR011233 Tellurite/Phi/PacB toxicity protection, TerW YPO0288 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0289 IPR011206 Citrate lyase beta subunit-like YPO0289 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain YPO0290 IPR011215 Phosphoribosyl transferase YPO0290 IPR028157 PELOTA RNA-binding domain YPO0291 IPR023214 HAD-like domain YPO0291 IPR024197 Uncharacterised conserved protein UCP030802 YPO0292 IPR011214 Uncharacterised conserved protein UCP020967 YPO0292 IPR022537 TRSP domain YPO0292 IPR029057 Phosphoribosyltransferase-like YPO0293 IPR011226 ATP-grasp family YPO0293 IPR013816 ATP-grasp fold, subdomain 2 YPO0294 IPR003325 TerD domain YPO0295 IPR003325 TerD domain YPO0295 IPR017115 Tellurite resistance, TerA YPO0296 IPR007791 Heat shock protein DnaJ-like protein DjlA YPO0296 IPR029024 TerB-like YPO0297 IPR005496 Integral membrane protein TerC YPO0297 IPR022369 Integral membrane protein TerC, riboswitch-linked YPO0298 IPR003325 TerD domain YPO0299 IPR003325 TerD domain YPO0300 IPR002686 Transposase IS200-like YPO0301 IPR010546 Protein of unknown function DUF1120 YPO0302 IPR000015 Outer membrane usher protein YPO0302 IPR018030 Fimbrial membrane usher, conserved site YPO0302 IPR025885 PapC, N-terminal domain YPO0302 IPR025949 PapC-like, C-terminal domain YPO0303 IPR008962 PapD-like YPO0303 IPR016147 PapD, N-terminal, bacterial YPO0303 IPR016148 Pili assembly chaperone, C-terminal domain YPO0304 IPR020846 Major facilitator superfamily domain YPO0306 IPR007087 Zinc finger, C2H2 YPO0308 IPR003610 Carbohydrate-binding module family 5/12 YPO0308 IPR003961 Fibronectin, type III YPO0308 IPR006094 FAD linked oxidase, N-terminal YPO0308 IPR012951 Berberine/berberine-like YPO0308 IPR013783 Immunoglobulin-like fold YPO0308 IPR016166 FAD-binding, type 2 YPO0308 IPR016167 FAD-binding, type 2, subdomain 1 YPO0309 IPR005546 Autotransporter beta-domain YPO0309 IPR006315 Outer membrane autotransporter barrel YPO0309 IPR011050 Pectin lyase fold/virulence factor YPO0309 IPR012332 P22 tailspike C-terminal domain-like YPO0310 IPR007440 Chorismate--pyruvate lyase YPO0310 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain YPO0311 IPR000537 UbiA prenyltransferase family YPO0311 IPR006370 4-hydroxybenzoate polyprenyl transferase YPO0311 IPR030470 YPO0311 YPO0311 IPR031103 YPO0311 YPO0312 IPR002123 Phospholipid/glycerol acyltransferase YPO0312 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase YPO0312 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB YPO0313 IPR000829 Diacylglycerol kinase, prokaryotic YPO0314 IPR006197 Peptidase S24, LexA-like YPO0314 IPR006199 LexA repressor, DNA-binding domain YPO0314 IPR006200 LexA repressor YPO0314 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0314 IPR015927 Peptidase S24/S26A/S26B/S26C YPO0314 IPR019759 Peptidase S24/S26A/S26B YPO0314 IPR028360 Peptidase S24/S26, beta-ribbon domain YPO0315 IPR002481 Ferric-uptake regulator YPO0315 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0316 IPR001269 tRNA-dihydrouridine synthase YPO0316 IPR004653 tRNA-dihydrouridine synthase, TIM-barrel, YjbN YPO0316 IPR013785 Aldolase-type TIM barrel YPO0316 IPR018517 tRNA-dihydrouridine synthase, conserved site YPO0318 IPR014318 Phage shock protein, PspG YPO0319 IPR002085 Alcohol dehydrogenase superfamily, zinc-type YPO0319 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site YPO0319 IPR011032 GroES (chaperonin 10)-like YPO0319 IPR013149 Alcohol dehydrogenase, C-terminal YPO0319 IPR013154 Alcohol dehydrogenase GroES-like YPO0319 IPR016040 NAD(P)-binding domain YPO0319 IPR020843 Polyketide synthase, enoylreductase YPO0320 IPR003593 AAA+ ATPase domain YPO0320 IPR007692 DNA helicase, DnaB type YPO0320 IPR007693 DNA helicase, DnaB-like, N-terminal YPO0320 IPR007694 DNA helicase, DnaB-like, C-terminal YPO0320 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal YPO0320 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0321 IPR000821 Alanine racemase YPO0321 IPR001608 Alanine racemase, N-terminal YPO0321 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal YPO0321 IPR011079 Alanine racemase, C-terminal YPO0321 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site YPO0321 IPR029066 PLP-binding barrel YPO0322 IPR000796 Aspartate/other aminotransferase YPO0322 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site YPO0322 IPR004839 Aminotransferase, class I/classII YPO0322 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPO0322 IPR015424 Pyridoxal phosphate-dependent transferase YPO0323 IPR007351 Uncharacterised protein YjbR YPO0324 IPR003439 ABC transporter-like YPO0324 IPR004602 UvrABC system subunit A YPO0324 IPR013815 ATP-grasp fold, subdomain 1 YPO0324 IPR017871 ABC transporter, conserved site YPO0324 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0325 IPR000424 Primosome PriB/single-strand DNA-binding YPO0325 IPR011344 Single-stranded DNA-binding protein YPO0325 IPR012340 Nucleic acid-binding, OB-fold YPO0326 IPR008000 Rhamnose mutarotase YPO0326 IPR011008 Dimeric alpha-beta barrel YPO0326 IPR013448 L-rhamnose 1-epimerase YPO0327 IPR001670 Alcohol dehydrogenase, iron-type YPO0327 IPR013460 Lactaldehyde reductase YPO0327 IPR018211 Alcohol dehydrogenase, iron-type, conserved site YPO0328 IPR001303 Class II aldolase/adducin N-terminal YPO0328 IPR013447 Rhamnulose-1-phosphate aldolase YPO0329 IPR009308 Rhamnose isomerase YPO0329 IPR013022 Xylose isomerase-like, TIM barrel domain YPO0330 IPR000577 YPO0330 YPO0330 IPR013449 Rhamnulokinase YPO0330 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPO0330 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPO0332 IPR003313 AraC-type arabinose-binding/dimerisation domain YPO0332 IPR009057 Homeodomain-like YPO0332 IPR014710 RmlC-like jelly roll fold YPO0332 IPR018060 DNA binding HTH domain, AraC-type YPO0332 IPR020449 Transcription regulator HTH, AraC- type YPO0332 IPR023609 Transcription regulator HTH, RhaS YPO0333 IPR003313 AraC-type arabinose-binding/dimerisation domain YPO0333 IPR009057 Homeodomain-like YPO0333 IPR011051 RmlC-like cupin domain YPO0333 IPR018060 DNA binding HTH domain, AraC-type YPO0333 IPR018062 HTH domain AraC-type, conserved site YPO0333 IPR020449 Transcription regulator HTH, AraC- type YPO0333 IPR023699 Transcription activator HTH, RhaR YPO0334 IPR004673 L-rhamnose-proton symport, RhaT YPO0337 IPR008992 Enterotoxin YPO0339 IPR004954 Peptidase M60, viral enhancin protein YPO0339 IPR031161 YPO0339 YPO0341 IPR001647 DNA-binding HTH domain, TetR-type YPO0341 IPR009057 Homeodomain-like YPO0341 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal YPO0341 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal YPO0342 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 YPO0342 IPR016040 NAD(P)-binding domain YPO0342 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPO0342 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO0342 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPO0342 IPR028261 Dihydroprymidine dehydrogenase domain II YPO0343 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPO0343 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO0344 IPR006478 Formate dehydrogenase, alpha subunit YPO0344 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site YPO0344 IPR006656 Molybdopterin oxidoreductase YPO0344 IPR006657 Molydopterin dinucleotide-binding domain YPO0344 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain YPO0344 IPR009010 Aspartate decarboxylase-like domain YPO0344 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site YPO0345 IPR003834 Cytochrome c assembly protein, transmembrane domain YPO0345 IPR012336 Thioredoxin-like fold YPO0345 IPR017937 Thioredoxin, conserved site YPO0345 IPR022910 Thiol:disulphide interchange protein DsbD YPO0345 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain YPO0346 IPR004323 Divalent ion tolerance protein, CutA YPO0346 IPR011322 Nitrogen regulatory PII-like, alpha/beta YPO0346 IPR023700 Divalent cation tolerance protein CutA, bacteria YPO0347 IPR004668 Anaerobic c4-dicarboxylate membrane transporter YPO0348 IPR000362 Fumarate lyase family YPO0348 IPR004708 Aspartate ammonia-lyase YPO0348 IPR008948 L-Aspartase-like YPO0348 IPR018951 Fumarase C, C-terminal YPO0348 IPR020557 Fumarate lyase, conserved site YPO0348 IPR022761 Fumarate lyase, N-terminal YPO0348 IPR024083 Fumarase/histidase, N-terminal YPO0349 IPR007313 FxsA cytoplasmic membrane protein YPO0350 IPR011032 GroES (chaperonin 10)-like YPO0350 IPR018369 Chaperonin Cpn10, conserved site YPO0350 IPR020818 Chaperonin Cpn10 YPO0351 IPR001844 Chaperonin Cpn60 YPO0351 IPR002423 Chaperonin Cpn60/TCP-1 YPO0351 IPR018370 Chaperonin Cpn60, conserved site YPO0351 IPR027409 GroEL-like apical domain YPO0351 IPR027413 GroEL-like equatorial domain YPO0352 IPR025294 Protein of unknown function DUF4156 YPO0353 IPR003739 Lysine-2,3-aminomutase family YPO0353 IPR007197 Radical SAM YPO0353 IPR013785 Aldolase-type TIM barrel YPO0353 IPR022462 Lysine-2,3-aminomutase-like YPO0354 IPR001059 Translation elongation factor P/YeiP, central YPO0354 IPR008991 Translation protein SH3-like domain YPO0354 IPR011768 Translation elongation factor P YPO0354 IPR012340 Nucleic acid-binding, OB-fold YPO0354 IPR013185 Translation elongation factor, KOW-like YPO0354 IPR013852 Translation elongation factor P/YeiP, conserved site YPO0354 IPR014722 Ribosomal protein L2 domain 2 YPO0354 IPR015365 Elongation factor P, C-terminal YPO0354 IPR020599 Translation elongation factor P/YeiP YPO0355 IPR000390 Small multidrug resistance protein family YPO0356 IPR002686 Transposase IS200-like YPO0357 IPR003418 Fumarate reductase, D subunit YPO0358 IPR003510 Fumarate reductase, subunit C YPO0359 IPR001041 2Fe-2S ferredoxin-type domain YPO0359 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein YPO0359 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site YPO0359 IPR009051 Alpha-helical ferredoxin YPO0359 IPR012675 Beta-grasp domain YPO0359 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPO0359 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO0359 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal YPO0360 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site YPO0360 IPR003953 FAD binding domain YPO0360 IPR005884 Fumarate reductase, flavoprotein subunit YPO0360 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit YPO0360 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal YPO0360 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPO0360 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain YPO0360 IPR030664 YPO0360 YPO0362 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) YPO0362 IPR004525 Elongation factor P--(R)-beta-lysine ligase YPO0362 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal YPO0362 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like YPO0363 IPR006685 Mechanosensitive ion channel MscS YPO0363 IPR006686 Mechanosensitive ion channel MscS, conserved site YPO0363 IPR010920 Like-Sm (LSM) domain YPO0363 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 YPO0363 IPR011066 Mechanosensitive ion channel MscS, C-terminal YPO0363 IPR024393 Mechanosensitive ion channel MscS, porin domain YPO0363 IPR025692 Mechanosensitive ion channel inner membrane domain 1 YPO0364 IPR003817 Phosphatidylserine decarboxylase-related YPO0364 IPR033177 YPO0364 YPO0364 IPR033178 YPO0364 YPO0365 IPR004881 Ribosome biogenesis GTPase RsgA, putative YPO0365 IPR010914 EngC GTPase YPO0365 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0366 IPR012337 Ribonuclease H-like domain YPO0366 IPR013520 Exonuclease, RNase T/DNA polymerase III YPO0366 IPR022894 Oligoribonuclease YPO0367 IPR004453 Epoxyqueuosine reductase QueG YPO0367 IPR009051 Alpha-helical ferredoxin YPO0367 IPR013542 Domain of unknown function DUF1730 YPO0367 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO0368 IPR000631 YjeF C-terminal domain YPO0368 IPR004443 YjeF N-terminal domain YPO0368 IPR029056 Ribokinase-like YPO0368 IPR030677 YPO0368 YPO0369 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE YPO0369 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0370 IPR002508 Cell wall hydrolase/autolysin, catalytic YPO0370 IPR018392 LysM domain YPO0370 IPR021731 AMIN domain YPO0371 IPR002099 DNA mismatch repair protein family YPO0371 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO0371 IPR013507 DNA mismatch repair protein, C-terminal YPO0371 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPO0371 IPR014762 DNA mismatch repair, conserved site YPO0371 IPR014790 MutL, C-terminal, dimerisation YPO0371 IPR020568 Ribosomal protein S5 domain 2-type fold YPO0371 IPR020667 DNA mismatch repair protein, MutL YPO0372 IPR018022 tRNA delta(2)-isopentenylpyrophosphate transferase YPO0372 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0373 IPR005001 Host factor Hfq YPO0373 IPR010920 Like-Sm (LSM) domain YPO0374 IPR006073 GTP binding domain YPO0374 IPR009022 Elongation factor G, III-V domain YPO0374 IPR016496 GTPase HflX YPO0374 IPR025121 GTPase HflX N-terminal domain YPO0374 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0374 IPR032305 YPO0374 YPO0375 IPR001107 Band 7 protein YPO0375 IPR001972 Stomatin family YPO0375 IPR010201 HflK YPO0375 IPR020980 Menbrane protein HflK, N-terminal YPO0376 IPR001107 Band 7 protein YPO0376 IPR001972 Stomatin family YPO0376 IPR010200 HflC YPO0376 IPR029060 PIN domain-like YPO0377 IPR019201 Protein of unknown function DUF2065 YPO0378 IPR001114 Adenylosuccinate synthetase YPO0378 IPR018220 Adenylosuccinate synthase, active site YPO0378 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0378 IPR033128 YPO0378 YPO0379 IPR000944 Transcription regulator Rrf2-like YPO0379 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0379 IPR023761 Transcriptional repressor HTH, NsrR YPO0379 IPR030489 YPO0379 YPO0380 IPR003029 Ribosomal protein S1, RNA-binding domain YPO0380 IPR004476 Ribonuclease II/ribonuclease R YPO0380 IPR011129 Cold shock protein YPO0380 IPR011805 Ribonuclease R YPO0380 IPR012340 Nucleic acid-binding, OB-fold YPO0380 IPR013223 Ribonuclease B, N-terminal OB domain YPO0380 IPR013668 Ribonuclease R winged-helix domain YPO0380 IPR022967 RNA-binding domain, S1 YPO0381 IPR001537 tRNA/rRNA methyltransferase, SpoU type YPO0381 IPR004441 RNA methyltransferase TrmH family YPO0381 IPR013123 RNA 2-O ribose methyltransferase, substrate binding YPO0381 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB YPO0381 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPO0381 IPR029028 Alpha/beta knot methyltransferases YPO0381 IPR029064 50S ribosomal protein L30e-like YPO0383 IPR006089 Acyl-CoA dehydrogenase, conserved site YPO0383 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain YPO0383 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal YPO0383 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain YPO0384 IPR010854 Domain of unknown function DUF1471 YPO0384 IPR025543 Dodecin-like YPO0385 IPR001270 ClpA/B family YPO0385 IPR002611 IstB-like ATP-binding protein YPO0385 IPR003593 AAA+ ATPase domain YPO0385 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0385 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO0386 IPR001584 Integrase, catalytic core YPO0386 IPR006120 Resolvase, HTH domain YPO0386 IPR009057 Homeodomain-like YPO0386 IPR012337 Ribonuclease H-like domain YPO0387 IPR003593 AAA+ ATPase domain YPO0387 IPR011704 ATPase, dynein-related, AAA domain YPO0387 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0388 IPR019292 5-methylcytosine restriction system component YPO0391 IPR002941 DNA methylase N-4/N-6 YPO0391 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPO0392 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO0392a IPR002514 Transposase IS3/IS911family YPO0392a IPR009057 Homeodomain-like YPO0396 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0397 IPR014544 Uncharacterised conserved protein UCP028408 YPO0397 IPR024534 Domain of unknown function DUF2220 YPO0397 IPR024537 Domain of unknown function DUF3322 YPO0398 IPR001915 Peptidase M48 YPO0399 IPR010295 Protein of unknown function DUF898 YPO0400 IPR023802 Colicin/pyocin immunity protein domain YPO0401 IPR009057 Homeodomain-like YPO0401 IPR018060 DNA binding HTH domain, AraC-type YPO0401 IPR018062 HTH domain AraC-type, conserved site YPO0401 IPR020449 Transcription regulator HTH, AraC- type YPO0402 IPR003353 Phosphotransferase system, fructose-specific IIB subunit YPO0402 IPR003501 Phosphotransferase system, EIIB component, type 2/3 YPO0403 IPR003353 Phosphotransferase system, fructose-specific IIB subunit YPO0403 IPR003501 Phosphotransferase system, EIIB component, type 2/3 YPO0404 IPR003352 Phosphotransferase system, EIIC YPO0404 IPR006327 Phosphotransferase system, fructose IIC component YPO0405 IPR000032 Phosphocarrier HPr protein-like YPO0405 IPR000121 PEP-utilising enzyme, C-terminal YPO0405 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site YPO0405 IPR002178 PTS EIIA type-2 domain YPO0405 IPR006318 Phosphoenolpyruvate-utilising enzyme YPO0405 IPR008279 PEP-utilising enzyme, mobile domain YPO0405 IPR008731 Phosphotransferase system, enzyme I N-terminal YPO0405 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain YPO0405 IPR016152 Phosphotransferase/anion transporter YPO0405 IPR018274 PEP-utilising enzyme, active site YPO0405 IPR023151 PEP-utilising enzyme, conserved site YPO0406 IPR019637 Protein of unknown function DUF2501 YPO0407 IPR007138 Antibiotic biosynthesis monooxygenase-like domain YPO0407 IPR011008 Dimeric alpha-beta barrel YPO0408 IPR002915 DeoC/FbaB/ lacD aldolase YPO0408 IPR013785 Aldolase-type TIM barrel YPO0409 IPR025997 Periplasmic binding protein domain YPO0409 IPR028082 Periplasmic binding protein-like I YPO0409 IPR030159 YPO0409 YPO0410 IPR001851 ABC transporter, permease YPO0411 IPR001851 ABC transporter, permease YPO0412 IPR003439 ABC transporter-like YPO0412 IPR003593 AAA+ ATPase domain YPO0412 IPR017871 ABC transporter, conserved site YPO0412 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0412 IPR030281 YPO0412 YPO0415 IPR000577 YPO0415 YPO0415 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPO0415 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPO0416 IPR002201 Glycosyl transferase, family 9 YPO0416 IPR011916 Lipopolysaccharide heptosyltransferase III, putative YPO0417 IPR007016 O-antigen ligase-related YPO0419 IPR010445 Protein of unknown function DUF1049 YPO0420 IPR003997 RTX secretion protein D, Gram-negative bacteria YPO0420 IPR006143 RND efflux pump, membrane fusion protein YPO0420 IPR032317 YPO0420 YPO0421 IPR001036 Acriflavin resistance protein YPO0421 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPO0424 IPR000070 Pectinesterase, catalytic YPO0424 IPR011050 Pectin lyase fold/virulence factor YPO0424 IPR012334 Pectin lyase fold YPO0425 IPR000160 GGDEF domain YPO0425 IPR029787 Nucleotide cyclase YPO0426 IPR009885 Protein of unknown function DUF1435 YPO0427 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPO0427 IPR007848 Methyltransferase small domain YPO0427 IPR013675 Methyltransferase small, N-terminal YPO0427 IPR023543 rRNA small subunit methyltransferase C YPO0427 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPO0428 IPR004615 DNA polymerase III, psi subunit YPO0429 IPR000182 GNAT domain YPO0429 IPR006464 Ribosomal-protein-alanine acetyltransferase YPO0429 IPR016181 Acyl-CoA N-acyltransferase YPO0430 IPR000795 Elongation factor, GTP-binding domain YPO0430 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 YPO0430 IPR004548 Peptide chain release factor 3 YPO0430 IPR005225 Small GTP-binding protein domain YPO0430 IPR009000 Translation protein, beta-barrel domain YPO0430 IPR009022 Elongation factor G, III-V domain YPO0430 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0430 IPR031157 YPO0430 YPO0430 IPR032090 YPO0430 YPO0431 IPR007055 BON domain YPO0431 IPR014004 Transport-associated and nodulation domain, bacteria YPO0432 IPR009760 Protein of unknown function DUF1328 YPO0433 IPR002641 Patatin/Phospholipase A2-related YPO0433 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase YPO0434 IPR001130 TatD family YPO0434 IPR018228 Deoxyribonuclease, TatD-related, conserved site YPO0434 IPR032466 YPO0434 YPO0435 IPR002668 Concentrative nucleoside transporter N-terminal domain YPO0435 IPR008276 Concentrative nucleoside transporter YPO0435 IPR011642 Nucleoside recognition Gate YPO0435 IPR011657 Concentrative nucleoside transporter C-terminal domain YPO0435 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial YPO0436 IPR002915 DeoC/FbaB/ lacD aldolase YPO0436 IPR011343 Deoxyribose-phosphate aldolase YPO0436 IPR013785 Aldolase-type TIM barrel YPO0436 IPR023649 Deoxyribose-phosphate aldolase type II YPO0439 IPR006124 Metalloenzyme YPO0439 IPR010045 Phosphopentomutase YPO0439 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha YPO0439 IPR017850 Alkaline-phosphatase-like, core domain YPO0439 IPR024052 Phosphopentomutase DeoB cap domain YPO0440 IPR000845 Nucleoside phosphorylase domain YPO0440 IPR004402 Purine nucleoside phosphorylase DeoD-type YPO0440 IPR018016 Nucleoside phosphorylase, conserved site YPO0440 IPR018017 Nucleoside phosphorylase YPO0441 IPR019305 Uncharacterised protein family Smp YPO0442 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like YPO0442 IPR023190 Phosphoserine phosphatase, domain 2 YPO0442 IPR023214 HAD-like domain YPO0443 IPR003593 AAA+ ATPase domain YPO0443 IPR004504 DNA repair protein RadA YPO0443 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPO0443 IPR020568 Ribosomal protein S5 domain 2-type fold YPO0443 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0444 IPR001387 Cro/C1-type helix-turn-helix domain YPO0444 IPR004821 Cytidyltransferase-like domain YPO0444 IPR006417 Nicotinamide-nucleotide adenylyltransferase YPO0444 IPR010982 Lambda repressor-like, DNA-binding domain YPO0444 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO0444 IPR016429 Bifunctional transcriptional regulator NadR YPO0444 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0445 IPR003812 Fido domain YPO0445 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0445 IPR025230 Domain of unknown function DUF4172 YPO0448 IPR006664 Outer membrane protein, bacterial YPO0448 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal YPO0449 IPR000160 GGDEF domain YPO0449 IPR029787 Nucleotide cyclase YPO0449 IPR033417 YPO0449 YPO0450 IPR025293 Protein of unknown function DUF4154 YPO0451 IPR001757 Cation-transporting P-type ATPase YPO0451 IPR004014 Cation-transporting P-type ATPase, N-terminal YPO0451 IPR006068 Cation-transporting P-type ATPase, C-terminal YPO0451 IPR008250 P-type ATPase, A domain YPO0451 IPR018303 P-type ATPase, phosphorylation site YPO0451 IPR023214 HAD-like domain YPO0451 IPR023298 P-type ATPase, transmembrane domain YPO0451 IPR023299 P-type ATPase, cytoplasmic domain N YPO0452 IPR000189 Prokaryotic transglycosylase, active site YPO0452 IPR008258 Lytic transglycosylase-like SLT domain YPO0452 IPR008939 Lytic transglycosylase, superhelical U-shaped YPO0452 IPR012289 Lytic transglycosylase, superhelical linker YPO0452 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain YPO0452 IPR023346 Lysozyme-like domain YPO0453 IPR000831 Trp repressor YPO0453 IPR010921 Trp repressor/replication initiator YPO0453 IPR013335 Trp repressor, bacterial YPO0454 IPR002786 Non-canonical purine NTP phosphatase YPO0454 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 YPO0454 IPR029001 Inosine triphosphate pyrophosphatase-like YPO0455 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site YPO0455 IPR013078 Histidine phosphatase superfamily, clade-1 YPO0455 IPR023086 Phosphoglycerate mutase, GpmB, probable YPO0455 IPR029033 Histidine phosphatase superfamily YPO0456 IPR009057 Homeodomain-like YPO0456 IPR010499 Bacterial transcription activator, effector binding YPO0456 IPR011256 Regulatory factor, effector binding domain YPO0456 IPR018060 DNA binding HTH domain, AraC-type YPO0456 IPR018062 HTH domain AraC-type, conserved site YPO0456 IPR020449 Transcription regulator HTH, AraC- type YPO0456 IPR029442 GyrI-like small molecule binding domain YPO0457 IPR010292 Uncharacterised protein family CreA YPO0458 IPR001789 Signal transduction response regulator, receiver domain YPO0458 IPR001867 Signal transduction response regulator, C-terminal YPO0458 IPR011006 CheY-like superfamily YPO0458 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0458 IPR016032 Signal transduction response regulator, C-terminal effector YPO0459 IPR001048 Aspartate/glutamate/uridylate kinase YPO0459 IPR001341 Aspartate kinase domain YPO0459 IPR001342 Homoserine dehydrogenase, catalytic YPO0459 IPR002912 ACT domain YPO0459 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding YPO0459 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I YPO0459 IPR016040 NAD(P)-binding domain YPO0459 IPR018042 Aspartate kinase, conserved site YPO0459 IPR019811 Homoserine dehydrogenase, conserved site YPO0459 IPR027795 GATS-like ACT domain YPO0460 IPR000870 Homoserine kinase YPO0460 IPR006203 GHMP kinase, ATP-binding, conserved site YPO0460 IPR006204 GHMP kinase N-terminal domain YPO0460 IPR013750 GHMP kinase, C-terminal domain YPO0460 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPO0460 IPR020568 Ribosomal protein S5 domain 2-type fold YPO0461 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site YPO0461 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPO0461 IPR004450 Threonine synthase-like YPO0461 IPR029144 Threonine synthase, N-terminal YPO0462 IPR005583 Uncharacterised protein family UPF0246 YPO0463 IPR001585 Transaldolase YPO0463 IPR004730 Transaldolase type 1 YPO0463 IPR013785 Aldolase-type TIM barrel YPO0463 IPR018225 Transaldolase, active site YPO0464 IPR001453 Molybdopterin binding domain YPO0464 IPR008284 Molybdenum cofactor biosynthesis, conserved site YPO0465 IPR011701 Major facilitator superfamily YPO0465 IPR020846 Major facilitator superfamily domain YPO0466 IPR011024 Gamma-crystallin-related YPO0466 IPR016181 Acyl-CoA N-acyltransferase YPO0467 IPR000791 GPR1/FUN34/yaaH YPO0468 IPR012725 Chaperone DnaK YPO0468 IPR013126 Heat shock protein 70 family YPO0468 IPR018181 Heat shock protein 70, conserved site YPO0468 IPR029047 Heat shock protein 70kD, peptide-binding domain YPO0468 IPR029048 Heat shock protein 70kD, C-terminal domain YPO0469 IPR001305 Heat shock protein DnaJ, cysteine-rich domain YPO0469 IPR001623 DnaJ domain YPO0469 IPR002939 Chaperone DnaJ, C-terminal YPO0469 IPR008971 HSP40/DnaJ peptide-binding YPO0469 IPR012724 Chaperone DnaJ YPO0469 IPR018253 DnaJ domain, conserved site YPO0470 IPR004670 Na+/H+ antiporter NhaA YPO0470 IPR023171 Na/H antiporter domain YPO0471 IPR000847 Transcription regulator HTH, LysR YPO0471 IPR005119 LysR, substrate-binding YPO0471 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0472 IPR002583 Ribosomal protein S20 YPO0474 IPR002606 Riboflavin kinase, bacterial YPO0474 IPR004821 Cytidyltransferase-like domain YPO0474 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO0474 IPR015864 FAD synthetase YPO0474 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic YPO0474 IPR023465 Riboflavin kinase domain YPO0474 IPR023468 Riboflavin kinase YPO0475 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPO0475 IPR002300 Aminoacyl-tRNA synthetase, class Ia YPO0475 IPR002301 Isoleucine-tRNA ligase YPO0475 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain YPO0475 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding YPO0475 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase YPO0475 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding YPO0475 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO0475 IPR023585 Isoleucine-tRNA ligase, type 1 YPO0476 IPR001872 Peptidase A8, signal peptidase II YPO0476a IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain YPO0476a IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type YPO0477 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YPO0479 IPR002686 Transposase IS200-like YPO0480 IPR000846 Dihydrodipicolinate reductase, N-terminal YPO0480 IPR016040 NAD(P)-binding domain YPO0480 IPR022663 Dihydrodipicolinate reductase, C-terminal YPO0480 IPR022664 Dihydrodipicolinate reductase, conserved site YPO0480 IPR023940 Dihydrodipicolinate reductase, bacterial YPO0481 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain YPO0481 IPR006274 Carbamoyl-phosphate synthase, small subunit YPO0481 IPR017926 Glutamine amidotransferase YPO0481 IPR029062 Class I glutamine amidotransferase-like YPO0482 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain YPO0482 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain YPO0482 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain YPO0482 IPR006275 Carbamoyl-phosphate synthase, large subunit YPO0482 IPR011607 Methylglyoxal synthase-like domain YPO0482 IPR013815 ATP-grasp fold, subdomain 1 YPO0482 IPR013816 ATP-grasp fold, subdomain 2 YPO0482 IPR016185 Pre-ATP-grasp domain YPO0483 IPR001123 Lysine-type exporter protein (LYSE/YGGA) YPO0484 IPR010619 Domain of unknown function DUF1212 YPO0485 IPR024528 Domain of unknown function DUF3815 YPO0486 IPR001796 Dihydrofolate reductase domain YPO0486 IPR012259 Dihydrofolate reductase YPO0486 IPR017925 Dihydrofolate reductase conserved site YPO0486 IPR024072 Dihydrofolate reductase-like domain YPO0487 IPR002686 Transposase IS200-like YPO0489 IPR022231 Protein of unknown function DUF3757 YPO0490 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YPO0490 IPR004843 Calcineurin-like phosphoesterase domain, apaH type YPO0490 IPR029052 Metallo-dependent phosphatase-like YPO0491 IPR007474 ApaG domain YPO0491 IPR023065 Uncharacterised protein family ApaG YPO0492 IPR001737 Ribosomal RNA adenine methylase transferase YPO0492 IPR011530 Ribosomal RNA adenine dimethylase YPO0492 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site YPO0492 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal YPO0492 IPR023165 rRNA adenine dimethylase-like YPO0492 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPO0493 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA YPO0493 IPR024084 Isopropylmalate dehydrogenase-like domain YPO0494 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type YPO0494 IPR008880 Trigger factor, C-terminal domain YPO0494 IPR015391 SurA N-terminal YPO0494 IPR023034 Peptidyl-prolyl isomerase SurA YPO0494 IPR027304 Trigger factor/SurA domain YPO0495 IPR005653 Organic solvent tolerance-like, N-terminal YPO0495 IPR007543 Organic solvent tolerance protein, C-terminal YPO0495 IPR020889 Lipopolysaccharide assembly, LptD YPO0496 IPR001623 DnaJ domain YPO0496 IPR007791 Heat shock protein DnaJ-like protein DjlA YPO0496 IPR023749 DnaJ-like protein DjlA YPO0496 IPR029024 TerB-like YPO0497 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F YPO0497 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site YPO0497 IPR020103 Pseudouridine synthase, catalytic domain YPO0498 IPR018754 Protein of unknown function DUF2285 YPO0499 IPR010657 ImpA, N-terminal YPO0500 IPR008312 Uncharacterised conserved protein UCP028301 YPO0501 IPR010269 Protein of unknown function DUF877 YPO0502 IPR008514 Type VI secretion system effector, Hcp YPO0503 IPR007048 GpW/Gp25/anti-adapter protein IraD YPO0504 IPR010272 Type VI secretion system, VCA0110 YPO0505 IPR010732 Protein of unknown function DUF1305 YPO0506 IPR001270 ClpA/B family YPO0506 IPR003593 AAA+ ATPase domain YPO0506 IPR003959 ATPase, AAA-type, core YPO0506 IPR004176 Clp, N-terminal YPO0506 IPR017729 Type VI secretion system, ATPase ClpV1 YPO0506 IPR019489 Clp ATPase, C-terminal YPO0506 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0507 IPR006531 Gp5 N-terminal YPO0507 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPO0507 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPO0510 IPR001646 Pentapeptide repeat YPO0510 IPR012334 Pectin lyase fold YPO0511 IPR021927 Protein of unknown function DUF3540 YPO0511a IPR025425 Domain of unknown function DUF4150 YPO0512 IPR017734 Type VI secretion system, lipoprotein SciN YPO0513 IPR010263 Protein of unknown function DUF876 YPO0514 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal YPO0514 IPR017732 Type IV / VI secretion system, DotU YPO0515 IPR009612 ImcF-related YPO0515 IPR010623 Domain of unknown function DUF1215 YPO0515 IPR017731 Type VI secretion system, IcmF YPO0515 IPR025743 ImcF-related, N-terminal domain YPO0515 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0517 IPR000330 SNF2-related YPO0517 IPR001650 Helicase, C-terminal YPO0517 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YPO0517 IPR022737 RNA polymerase recycling, bacterial, C-terminal YPO0517 IPR023949 RNA polymerase-associated protein RapA YPO0517 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0518 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain YPO0518 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain YPO0518 IPR006172 DNA-directed DNA polymerase, family B YPO0518 IPR012337 Ribonuclease H-like domain YPO0518 IPR017964 DNA-directed DNA polymerase, family B, conserved site YPO0518 IPR023211 DNA polymerase, palm domain YPO0519 IPR032816 YPO0519 YPO0519 IPR032818 YPO0519 YPO0520 IPR003439 ABC transporter-like YPO0520 IPR003593 AAA+ ATPase domain YPO0520 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ YPO0520 IPR017871 ABC transporter, conserved site YPO0520 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0521 IPR000515 MetI-like domain YPO0521 IPR005947 Thiamine ABC transporter, permease protein YPO0522 IPR005948 Thiamine ABC transporter periplasmic binding protein YPO0522 IPR005967 Proteobacterial thiamine ABC transporter, periplasmic binding protein YPO0524 IPR000914 Bacterial extracellular solute-binding protein, family 5 YPO0524 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0524 IPR023767 Transcriptional regulator SgrR YPO0524 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain YPO0527 IPR001270 ClpA/B family YPO0527 IPR002611 IstB-like ATP-binding protein YPO0527 IPR003593 AAA+ ATPase domain YPO0527 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0527 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO0528 IPR001584 Integrase, catalytic core YPO0528 IPR006120 Resolvase, HTH domain YPO0528 IPR009057 Homeodomain-like YPO0528 IPR012337 Ribonuclease H-like domain YPO0530 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel YPO0530 IPR004431 3-isopropylmalate dehydratase, small subunit YPO0530 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YPO0530 IPR015937 Aconitase/isopropylmalate dehydratase YPO0531 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha YPO0531 IPR004430 3-isopropylmalate dehydratase, large subunit YPO0531 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 YPO0531 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 YPO0531 IPR015937 Aconitase/isopropylmalate dehydratase YPO0531 IPR018136 Aconitase family, 4Fe-4S cluster binding site YPO0532 IPR001804 Isocitrate and isopropylmalate dehydrogenases family YPO0532 IPR004429 Isopropylmalate dehydrogenase YPO0532 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site YPO0532 IPR024084 Isopropylmalate dehydrogenase-like domain YPO0533 IPR000891 Pyruvate carboxyltransferase YPO0533 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site YPO0533 IPR005671 2-isopropylmalate synthase, bacterial-type YPO0533 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain YPO0533 IPR013785 Aldolase-type TIM barrel YPO0534 IPR002686 Transposase IS200-like YPO0535 IPR000847 Transcription regulator HTH, LysR YPO0535 IPR005119 LysR, substrate-binding YPO0535 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0537 IPR000873 AMP-dependent synthetase/ligase YPO0537 IPR020845 AMP-binding, conserved site YPO0539 IPR000399 TPP-binding enzyme, conserved site YPO0539 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YPO0539 IPR012000 Thiamine pyrophosphate enzyme, central domain YPO0539 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain YPO0539 IPR012846 Acetolactate synthase, large subunit, biosynthetic YPO0539 IPR029035 DHS-like NAD/FAD-binding domain YPO0539 IPR029061 Thiamin diphosphate-binding fold YPO0540 IPR002912 ACT domain YPO0540 IPR004789 Acetolactate synthase, small subunit YPO0540 IPR019455 Acetolactate synthase, small subunit, C-terminal YPO0541 IPR002686 Transposase IS200-like YPO0543 IPR000843 Transcription regulator HTH, LacI YPO0543 IPR001761 Periplasmic binding protein/LacI sugar binding domain YPO0543 IPR010982 Lambda repressor-like, DNA-binding domain YPO0543 IPR012781 D-fructose-responsive transcription factor YPO0543 IPR028082 Periplasmic binding protein-like I YPO0544 IPR010574 L-alanine exporter AlaE YPO0546 IPR003444 MraZ YPO0546 IPR020603 MraZ domain YPO0547 IPR002903 Ribosomal RNA small subunit methyltransferase H YPO0547 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain YPO0547 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPO0548 IPR011922 Cell division protein FtsL YPO0549 IPR001460 Penicillin-binding protein, transpeptidase YPO0549 IPR005311 Penicillin-binding protein, dimerisation domain YPO0549 IPR012338 Beta-lactamase/transpeptidase-like YPO0550 IPR000713 Mur ligase, N-terminal YPO0550 IPR004101 Mur ligase, C-terminal YPO0550 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase YPO0550 IPR013221 Mur ligase, central YPO0551 IPR000713 Mur ligase, N-terminal YPO0551 IPR004101 Mur ligase, C-terminal YPO0551 IPR005863 UDP-MurNAc-pentapeptide synthetase YPO0551 IPR013221 Mur ligase, central YPO0552 IPR000715 Glycosyl transferase, family 4 YPO0552 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase YPO0552 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site YPO0553 IPR004101 Mur ligase, C-terminal YPO0553 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase YPO0553 IPR013221 Mur ligase, central YPO0553 IPR016040 NAD(P)-binding domain YPO0554 IPR001182 Cell cycle protein FtsW/RodA YPO0554 IPR013437 Cell division protein FtsW YPO0554 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site YPO0555 IPR004276 Glycosyl transferase, family 28 YPO0555 IPR006009 N-acetylglucosaminyltransferase, MurG YPO0555 IPR007235 Glycosyl transferase, family 28, C-terminal YPO0556 IPR000713 Mur ligase, N-terminal YPO0556 IPR004101 Mur ligase, C-terminal YPO0556 IPR005758 UDP-N-acetylmuramate-alanine ligase YPO0556 IPR013221 Mur ligase, central YPO0556 IPR016040 NAD(P)-binding domain YPO0557 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site YPO0557 IPR005905 D-alanine--D-alanine ligase YPO0557 IPR011095 D-alanine--D-alanine ligase, C-terminal YPO0557 IPR011127 D-alanine--D-alanine ligase, N-terminal domain YPO0557 IPR013815 ATP-grasp fold, subdomain 1 YPO0557 IPR013816 ATP-grasp fold, subdomain 2 YPO0557 IPR016185 Pre-ATP-grasp domain YPO0558 IPR005548 Cell division protein FtsQ/DivIB YPO0558 IPR013685 Polypeptide-transport-associated, FtsQ-type YPO0558 IPR026579 Cell division protein FtsQ YPO0559 IPR003494 SHS2 domain inserted in FtsA YPO0559 IPR020823 Cell division protein FtsA YPO0560 IPR000158 Cell division protein FtsZ YPO0560 IPR003008 Tubulin/FtsZ, GTPase domain YPO0560 IPR008280 Tubulin/FtsZ, C-terminal YPO0560 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain YPO0560 IPR020805 Cell division protein FtsZ, conserved site YPO0560 IPR024757 Cell division protein FtsZ, C-terminal YPO0561 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase YPO0561 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal YPO0561 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal YPO0561 IPR020568 Ribosomal protein S5 domain 2-type fold YPO0562 IPR007922 Protein of unknown function DUF721/UPF0232 YPO0563 IPR009502 Secretion monitor YPO0564 IPR000185 Protein translocase subunit SecA YPO0564 IPR004027 SEC-C motif YPO0564 IPR011115 SecA DEAD-like, N-terminal YPO0564 IPR011116 SecA Wing/Scaffold YPO0564 IPR011130 SecA preprotein, cross-linking domain YPO0564 IPR020937 SecA conserved site YPO0564 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0565 IPR000086 NUDIX hydrolase domain YPO0565 IPR003561 Mutator MutT YPO0565 IPR015797 NUDIX hydrolase domain-like YPO0565 IPR020084 NUDIX hydrolase, conserved site YPO0565 IPR020476 NUDIX hydrolase YPO0566 IPR001270 ClpA/B family YPO0566 IPR002611 IstB-like ATP-binding protein YPO0566 IPR003593 AAA+ ATPase domain YPO0566 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0566 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO0567 IPR001584 Integrase, catalytic core YPO0567 IPR006120 Resolvase, HTH domain YPO0567 IPR009057 Homeodomain-like YPO0567 IPR012337 Ribonuclease H-like domain YPO0568 IPR032808 YPO0568 YPO0569 IPR025612 YqjK-like protein YPO0569a IPR009937 Protein of unknown function DUF1469 YPO0570 IPR010279 Protein of unknown function DUF883, ElaB YPO0572 IPR009468 Protein of unknown function DUF1090 YPO0573 IPR026574 Modulator protein MzrA YPO0573 IPR027398 SecD export protein N-terminal TM domain YPO0574 IPR032816 YPO0574 YPO0574 IPR032818 YPO0574 YPO0576 IPR000524 Transcription regulator HTH, GntR YPO0576 IPR008920 Transcription regulator FadR/GntR, C-terminal YPO0576 IPR011711 GntR, C-terminal YPO0576 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0577 IPR000849 Sugar phosphate transporter YPO0577 IPR011701 Major facilitator superfamily YPO0577 IPR020846 Major facilitator superfamily domain YPO0579 IPR003766 Uronate isomerase YPO0579 IPR023177 Uronate isomerase, domain 2 YPO0579 IPR032466 YPO0579 YPO0580 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YPO0580 IPR013118 Mannitol dehydrogenase, C-terminal YPO0580 IPR013131 Mannitol dehydrogenase, N-terminal YPO0580 IPR013328 Dehydrogenase, multihelical YPO0580 IPR016040 NAD(P)-binding domain YPO0580 IPR023668 Altronate oxidoreductase YPO0581 IPR007392 D-galactarate dehydratase/Altronate hydrolase, C-terminal YPO0581 IPR013974 SAF domain YPO0582 IPR019629 Uncharacterised protein family HI1736/YgjV YPO0582 IPR026267 Inner membrane protein YgjV YPO0583 IPR002686 Transposase IS200-like YPO0584 IPR001991 Sodium:dicarboxylate symporter YPO0584 IPR023025 Serine/threonine transporter SstT YPO0585 IPR000683 Oxidoreductase, N-terminal YPO0585 IPR016040 NAD(P)-binding domain YPO0586 IPR002725 Protein of unknown function DUF45 YPO0587 IPR004899 Pertactin, central region YPO0587 IPR005546 Autotransporter beta-domain YPO0587 IPR006315 Outer membrane autotransporter barrel YPO0587 IPR011050 Pectin lyase fold/virulence factor YPO0587 IPR012332 P22 tailspike C-terminal domain-like YPO0588 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPO0588 IPR007848 Methyltransferase small domain YPO0588 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD YPO0588 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPO0589 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal YPO0589 IPR013785 Aldolase-type TIM barrel YPO0589 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPO0590 IPR005325 Protein of unknown function DUF308, membrane YPO0592 IPR000719 Protein kinase domain YPO0592 IPR008266 Tyrosine-protein kinase, active site YPO0592 IPR011009 Protein kinase-like domain YPO0593 IPR001932 Protein phosphatase 2C (PP2C)-like domain YPO0594 IPR002035 von Willebrand factor, type A YPO0594 IPR028274 TerY-C metal binding domain YPO0595 IPR002035 von Willebrand factor, type A YPO0595 IPR011392 Tellurite resistance, TerY YPO0596 IPR003325 TerD domain YPO0597 IPR002035 von Willebrand factor, type A YPO0597 IPR011392 Tellurite resistance, TerY YPO0598 IPR005565 Haemolysin activator HlyB YPO0598 IPR013686 Polypeptide-transport-associated, ShlB-type YPO0598 IPR027282 Two partner secretion pathway transporter YPO0599 IPR006914 VENN motif-containing domain YPO0599 IPR008638 Filamentous haemagglutinin, N-terminal YPO0599 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPO0599 IPR011050 Pectin lyase fold/virulence factor YPO0599 IPR012334 Pectin lyase fold YPO0599 IPR024973 ESPR domain YPO0599 IPR025157 Haemagluttinin repeat YPO0602 IPR028952 Immunity protein 38 YPO0606 IPR005546 Autotransporter beta-domain YPO0607 IPR025737 MetA-pathway of phenol degradation, putative YPO0608 IPR019282 Domain of unknown function DUF2329 YPO0609 IPR003439 ABC transporter-like YPO0609 IPR003593 AAA+ ATPase domain YPO0609 IPR008995 Molybdate/tungstate binding, C-terminal YPO0609 IPR012340 Nucleic acid-binding, OB-fold YPO0609 IPR013611 Transport-associated OB, type 2 YPO0609 IPR017871 ABC transporter, conserved site YPO0609 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0610 IPR008928 Six-hairpin glycosidase-like YPO0611 IPR000843 Transcription regulator HTH, LacI YPO0611 IPR010982 Lambda repressor-like, DNA-binding domain YPO0611 IPR028082 Periplasmic binding protein-like I YPO0612 IPR006059 Bacterial extracellular solute-binding, family 1 YPO0613 IPR000515 MetI-like domain YPO0614 IPR000515 MetI-like domain YPO0616 IPR001764 Glycoside hydrolase, family 3, N-terminal YPO0616 IPR002772 Glycoside hydrolase family 3 C-terminal domain YPO0616 IPR017853 Glycoside hydrolase, superfamily YPO0616 IPR026891 Fibronectin type III-like domain YPO0616 IPR026892 Glycoside hydrolase family 3 YPO0617 IPR003423 Outer membrane efflux protein YPO0617 IPR028351 Cyclolysin transport protein CyaE YPO0618 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein YPO0619 IPR030196 YPO0619 YPO0620 IPR031381 YPO0620 YPO0623 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site YPO0623 IPR004839 Aminotransferase, class I/classII YPO0623 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPO0623 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPO0623 IPR015424 Pyridoxal phosphate-dependent transferase YPO0624 IPR018461 Na+/H+ antiporter, NhaC-like YPO0625 IPR019587 Polyketide cyclase/dehydrase YPO0625 IPR023393 START-like domain YPO0626 IPR013559 YheO-like YPO0627 IPR006056 Enamine/imine deaminase YjgF-like YPO0627 IPR006175 YjgF/Yer057p/UK114 family YPO0627 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like YPO0627 IPR019897 YjgF-like protein, conserved site YPO0628 IPR006175 YjgF/Yer057p/UK114 family YPO0628 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like YPO0629 IPR011008 Dimeric alpha-beta barrel YPO0629 IPR014910 Mono-oxygenase, YdhR YPO0630 IPR012336 Thioredoxin-like fold YPO0630 IPR023169 UPF0413, central domain YPO0631 IPR000847 Transcription regulator HTH, LysR YPO0631 IPR005119 LysR, substrate-binding YPO0631 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0637 IPR001584 Integrase, catalytic core YPO0637 IPR006120 Resolvase, HTH domain YPO0637 IPR009057 Homeodomain-like YPO0637 IPR012337 Ribonuclease H-like domain YPO0638 IPR001270 ClpA/B family YPO0638 IPR002611 IstB-like ATP-binding protein YPO0638 IPR003593 AAA+ ATPase domain YPO0638 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0638 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO0640 IPR018958 SMI1/KNR4 like domain YPO0643 IPR000943 RNA polymerase sigma-70 YPO0643 IPR007127 RNA polymerase sigma factor 70, region 1.1 YPO0643 IPR007624 RNA polymerase sigma-70 region 3 YPO0643 IPR007627 RNA polymerase sigma-70 region 2 YPO0643 IPR007630 RNA polymerase sigma-70 region 4 YPO0643 IPR007631 RNA polymerase sigma factor 70, non-essential domain YPO0643 IPR009042 RNA polymerase sigma-70 region 1.2 YPO0643 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0643 IPR012760 RNA polymerase sigma factor RpoD, C-terminal YPO0643 IPR013324 RNA polymerase sigma factor, region 3/4 YPO0643 IPR013325 RNA polymerase sigma factor, region 2 YPO0643 IPR014284 RNA polymerase sigma-70 like domain YPO0643 IPR028630 RNA polymerase sigma factor RpoD YPO0644 IPR002694 Zinc finger, CHC2-type YPO0644 IPR006171 Toprim domain YPO0644 IPR006295 DNA primase, DnaG YPO0644 IPR013173 DNA primase DnaG, DnaB-binding domain YPO0644 IPR013264 DNA primase, catalytic core, N-terminal YPO0644 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal YPO0644 IPR019475 DNA primase, DnaB-helicase binding domain YPO0644 IPR030846 YPO0644 YPO0645 IPR001911 Ribosomal protein S21 YPO0645 IPR018278 Ribosomal protein S21, conserved site YPO0646 IPR000905 Gcp-like domain YPO0646 IPR017860 Peptidase M22, conserved site YPO0646 IPR017861 Kae1/YgjD family YPO0646 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD YPO0647 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY YPO0648 IPR006156 Dihydroneopterin aldolase YPO0648 IPR006157 Dihydroneopterin aldolase/epimerase domain YPO0649 IPR003824 Undecaprenyl-diphosphatase UppP YPO0650 IPR002646 Poly A polymerase, head domain YPO0650 IPR003607 HD/PDEase domain YPO0650 IPR006674 HD domain YPO0650 IPR012006 tRNA nucleotidyltransferase, proteobacteria YPO0650 IPR032828 YPO0650 YPO0651 IPR003646 SH3-like domain, bacterial-type YPO0651 IPR016476 SH3 domain protein YPO0652 IPR023577 CYTH-like domain YPO0652 IPR033469 YPO0652 YPO0653 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain YPO0653 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase YPO0653 IPR023057 Glutamate-ammonia-ligase adenylyltransferase YPO0654 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YPO0654 IPR004821 Cytidyltransferase-like domain YPO0654 IPR011611 Carbohydrate kinase PfkB YPO0654 IPR011913 RfaE bifunctional protein, domain I YPO0654 IPR011914 RfaE bifunctional protein, domain II YPO0654 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO0654 IPR023030 Bifunctional protein HldE YPO0654 IPR029056 Ribokinase-like YPO0655 IPR002293 Amino acid/polyamine transporter I YPO0656 IPR007475 Membrane fusogenic activity YPO0658 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB YPO0658 IPR017945 DHBP synthase RibB-like alpha/beta domain YPO0659 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B YPO0659 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type YPO0660 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain YPO0660 IPR016185 Pre-ATP-grasp domain YPO0661 IPR009576 Biofilm formation YgiB YPO0663 IPR003423 Outer membrane efflux protein YPO0663 IPR010130 Type I secretion outer membrane protein, TolC YPO0664 IPR000086 NUDIX hydrolase domain YPO0664 IPR004385 Nucleoside diphosphate pyrophosphatase YPO0664 IPR015797 NUDIX hydrolase domain-like YPO0664 IPR020084 NUDIX hydrolase, conserved site YPO0665 IPR009659 Protein of unknown function DUF1249 YPO0666 IPR004843 Calcineurin-like phosphoesterase domain, apaH type YPO0666 IPR013622 Calcineurin-like phosphoesterase C-terminal YPO0666 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA YPO0666 IPR029052 Metallo-dependent phosphatase-like YPO0667 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA YPO0667 IPR029058 Alpha/Beta hydrolase fold YPO0668 IPR001241 DNA topoisomerase, type IIA YPO0668 IPR002288 DNA gyrase B subunit, C-terminal YPO0668 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO0668 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative YPO0668 IPR006171 Toprim domain YPO0668 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 YPO0668 IPR013759 DNA topoisomerase, type IIA, central domain YPO0668 IPR013760 DNA topoisomerase, type IIA-like domain YPO0668 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPO0668 IPR018522 DNA topoisomerase, type IIA, conserved site YPO0668 IPR020568 Ribosomal protein S5 domain 2-type fold YPO0669 IPR000847 Transcription regulator HTH, LysR YPO0669 IPR005119 LysR, substrate-binding YPO0669 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0670 IPR003680 Flavodoxin-like fold YPO0670 IPR029039 Flavoprotein-like YPO0671 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal YPO0671 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative YPO0671 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel YPO0671 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta YPO0671 IPR013760 DNA topoisomerase, type IIA-like domain YPO0671 IPR024946 Arginine repressor C-terminal-like domain YPO0672 IPR002123 Phospholipid/glycerol acyltransferase YPO0672 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase YPO0673 IPR008972 Cupredoxin YPO0673 IPR011706 Multicopper oxidase, type 2 YPO0673 IPR011707 Multicopper oxidase, type 3 YPO0673 IPR026589 Cell division protein FtsP YPO0676 IPR001395 Aldo/keto reductase YPO0676 IPR018170 Aldo/keto reductase, conserved site YPO0676 IPR020471 Aldo/keto reductase subgroup YPO0676 IPR023210 NADP-dependent oxidoreductase domain YPO0678 IPR001670 Alcohol dehydrogenase, iron-type YPO0678 IPR018211 Alcohol dehydrogenase, iron-type, conserved site YPO0679 IPR009057 Homeodomain-like YPO0679 IPR009594 Transcription regulator HTH, AraC, N-terminal YPO0679 IPR018060 DNA binding HTH domain, AraC-type YPO0680 IPR032816 YPO0680 YPO0680 IPR032818 YPO0680 YPO0681 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme YPO0681 IPR006233 Cystathionine beta-lyase, bacterial YPO0681 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPO0681 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPO0681 IPR015424 Pyridoxal phosphate-dependent transferase YPO0682 IPR002898 MotA/TolQ/ExbB proton channel YPO0682 IPR014164 TonB-system energizer ExbB type-1 YPO0683 IPR003400 Biopolymer transport protein ExbD/TolR YPO0683 IPR014170 TonB system transport protein ExbD type-1 YPO0684 IPR002035 von Willebrand factor, type A YPO0685 IPR031582 YPO0685 YPO0686 IPR012495 TadE-like YPO0687 IPR011990 Tetratricopeptide-like helical domain YPO0688 IPR018076 Type II secretion system F domain YPO0689 IPR018076 Type II secretion system F domain YPO0690 IPR001482 Type II secretion system protein E YPO0690 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0691 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0695 IPR000045 Prepilin type IV endopeptidase, peptidase domain YPO0696 IPR002686 Transposase IS200-like YPO0697 IPR002686 Transposase IS200-like YPO0698 IPR000015 Outer membrane usher protein YPO0698 IPR025885 PapC, N-terminal domain YPO0698 IPR025949 PapC-like, C-terminal domain YPO0699 IPR001829 Pili assembly chaperone, bacterial YPO0699 IPR008962 PapD-like YPO0699 IPR016147 PapD, N-terminal, bacterial YPO0699 IPR016148 Pili assembly chaperone, C-terminal domain YPO0699 IPR018046 Pili assembly chaperone, conserved site YPO0700 IPR000259 Fimbrial-type adhesion domain YPO0700 IPR008966 Adhesion domain YPO0701 IPR002491 ABC transporter periplasmic binding domain YPO0703 IPR021326 Protein of unknown function DUF2931 YPO0706 IPR006135 Type III secretion system substrate exporter YPO0706 IPR006136 Type III exporter system, flagellar biosynthetic protein FlhB YPO0706 IPR029025 Type III secretion system substrate exporter, C-terminal YPO0707 IPR002010 Type III secretion system inner membrane R protein YPO0708 IPR002191 Bacterial export protein family 3 YPO0708 IPR006305 Flagellar biosynthesis protein FliQ YPO0709 IPR005837 Flagellar transport protein FliP YPO0709 IPR005838 Type III secretion system inner membrane P protein YPO0710 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb YPO0710 IPR001543 Surface presentation of antigen (SpoA) YPO0710 IPR012826 Flagellar motor switch FliN YPO0711 IPR001543 Surface presentation of antigen (SpoA) YPO0712 IPR002078 RNA polymerase sigma factor 54 interaction domain YPO0712 IPR002197 DNA binding HTH domain, Fis-type YPO0712 IPR003593 AAA+ ATPase domain YPO0712 IPR009057 Homeodomain-like YPO0712 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YPO0712 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPO0712 IPR025944 Sigma-54 interaction domain, conserved site YPO0712 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0712 IPR029995 YPO0712 YPO0713 IPR001624 Flagellar hook-basal body complex protein FliE YPO0714 IPR000067 Flagellar M-ring protein FliF YPO0714 IPR006182 Secretory protein YscJ/FliF YPO0714 IPR013556 Flagellar M-ring C-terminal YPO0715 IPR000090 Flagellar motor switch protein FliG YPO0715 IPR011002 Flagellar motor switch protein FliG, alpha-helical YPO0715 IPR023087 YPO0715 YPO0715 IPR028263 Flagellar motor switch protein FliG, N-terminal domain YPO0715 IPR032779 YPO0715 YPO0716 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE YPO0716 IPR019191 Essential protein Yae1, N-terminal YPO0717 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain YPO0717 IPR003593 AAA+ ATPase domain YPO0717 IPR005714 ATPase, type III secretion system, FliI/YscN YPO0717 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site YPO0717 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0717 IPR032463 YPO0717 YPO0718 IPR012823 Flagellar export FliJ YPO0719 IPR007809 FlgN-like domain YPO0720 IPR007412 Anti-sigma-28 factor, FlgM YPO0720 IPR031316 YPO0720 YPO0721 IPR013974 SAF domain YPO0721 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal YPO0722 IPR001444 Flagellar basal body rod protein, N-terminal YPO0722 IPR006300 Flagellar basal-body rod protein FlgB YPO0722 IPR019776 Flagellar basal body rod protein, conserved site YPO0723 IPR001444 Flagellar basal body rod protein, N-terminal YPO0723 IPR006299 Flagellar basal-body rod protein FlgC YPO0723 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPO0723 IPR019776 Flagellar basal body rod protein, conserved site YPO0724 IPR005648 Flagellar hook capping protein YPO0724 IPR025963 FlgD Tudor-like domain YPO0724 IPR025965 FlgD Ig-like domain YPO0725 IPR001444 Flagellar basal body rod protein, N-terminal YPO0725 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPO0725 IPR011491 Flagellar basal body FlaE YPO0725 IPR019776 Flagellar basal body rod protein, conserved site YPO0725 IPR020013 Fagellar hook-basal body protein, FlgE/F/G YPO0726 IPR002686 Transposase IS200-like YPO0728 IPR001444 Flagellar basal body rod protein, N-terminal YPO0728 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPO0728 IPR012834 Flagellar basal-body rod FlgG YPO0728 IPR019776 Flagellar basal body rod protein, conserved site YPO0728 IPR020013 Fagellar hook-basal body protein, FlgE/F/G YPO0729 IPR000527 Flagellar L-ring protein YPO0730 IPR001782 Flagellar P-ring protein YPO0731 IPR019301 Flagellar protein FlgJ, N-terminal YPO0732 IPR001444 Flagellar basal body rod protein, N-terminal YPO0732 IPR002371 Flagellar hook-associated protein, FlgK YPO0732 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPO0733 IPR001029 Flagellin, D0/D1 domain YPO0733 IPR013384 Flagellar hook-associated protein 3 YPO0736 IPR001867 Signal transduction response regulator, C-terminal YPO0736 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0736 IPR016032 Signal transduction response regulator, C-terminal effector YPO0737 IPR001029 Flagellin, D0/D1 domain YPO0737 IPR001492 Flagellin YPO0738 IPR001029 Flagellin, D0/D1 domain YPO0738 IPR001492 Flagellin YPO0739 IPR001029 Flagellin, D0/D1 domain YPO0739 IPR001492 Flagellin YPO0740 IPR003481 Flagellar hook-associated protein 2, N-terminal YPO0740 IPR010809 Flagellar hook-associated 2, C-terminal YPO0740 IPR010810 Flagellin hook, IN motif YPO0741 IPR003713 Flagellar protein FliS YPO0743 IPR011004 Trimeric LpxA-like YPO0743 IPR018357 Hexapeptide transferase, conserved site YPO0743 IPR021136 Flagellar hook-length control protein-like, C-terminal YPO0744 IPR005503 Flagellar basal body-associated protein FliL YPO0745 IPR000943 RNA polymerase sigma-70 YPO0745 IPR007624 RNA polymerase sigma-70 region 3 YPO0745 IPR007627 RNA polymerase sigma-70 region 2 YPO0745 IPR007630 RNA polymerase sigma-70 region 4 YPO0745 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0745 IPR012845 RNA polymerase sigma factor, FliA/WhiG YPO0745 IPR013324 RNA polymerase sigma factor, region 3/4 YPO0745 IPR013325 RNA polymerase sigma factor, region 2 YPO0745 IPR014284 RNA polymerase sigma-70 like domain YPO0746 IPR000540 Flagellar motor protein MotA, conserved site YPO0746 IPR002898 MotA/TolQ/ExbB proton channel YPO0746 IPR022522 Flagellar motor stator, MotA YPO0747 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal YPO0747 IPR025713 Motility protein B, N-terminal domain YPO0751 IPR008523 Lactobacillus phage LBR48, DUF805 YPO0754 IPR022553 Protein of unknown function DUF2645 YPO0755 IPR009057 Homeodomain-like YPO0755 IPR010921 Trp repressor/replication initiator YPO0755 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0756 IPR001584 Integrase, catalytic core YPO0756 IPR012337 Ribonuclease H-like domain YPO0756 IPR025948 HTH-like domain YPO0757 IPR001547 Glycoside hydrolase, family 5 YPO0757 IPR013781 Glycoside hydrolase, catalytic domain YPO0757 IPR017853 Glycoside hydrolase, superfamily YPO0758 IPR000843 Transcription regulator HTH, LacI YPO0758 IPR010982 Lambda repressor-like, DNA-binding domain YPO0758 IPR028082 Periplasmic binding protein-like I YPO0759 IPR001898 Sodium/sulphate symporter YPO0759 IPR031312 YPO0759 YPO0762 IPR001826 RHS protein YPO0762 IPR006530 YD repeat YPO0762 IPR022385 Rhs repeat-associated core YPO0762 IPR031325 YPO0762 YPO0763 IPR011990 Tetratricopeptide-like helical domain YPO0764 IPR006531 Gp5 N-terminal YPO0764 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPO0764 IPR010609 Gp5, C-terminal YPO0764 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPO0767 IPR003474 Gluconate transporter YPO0770 IPR003439 ABC transporter-like YPO0770 IPR003593 AAA+ ATPase domain YPO0770 IPR011527 ABC transporter type 1, transmembrane domain YPO0770 IPR017871 ABC transporter, conserved site YPO0770 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0771 IPR003439 ABC transporter-like YPO0771 IPR003593 AAA+ ATPase domain YPO0771 IPR011527 ABC transporter type 1, transmembrane domain YPO0771 IPR017871 ABC transporter, conserved site YPO0771 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0772 IPR011701 Major facilitator superfamily YPO0772 IPR020846 Major facilitator superfamily domain YPO0773 IPR001031 Thioesterase YPO0773 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS YPO0773 IPR029058 Alpha/Beta hydrolase fold YPO0774 IPR000683 Oxidoreductase, N-terminal YPO0774 IPR010091 Thiazolinyl imide reductase YPO0774 IPR016040 NAD(P)-binding domain YPO0775 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain YPO0775 IPR016040 NAD(P)-binding domain YPO0776 IPR000873 AMP-dependent synthetase/ligase YPO0776 IPR001031 Thioesterase YPO0776 IPR001242 Condensation domain YPO0776 IPR006162 Phosphopantetheine attachment site YPO0776 IPR009081 Acyl carrier protein-like YPO0776 IPR010071 Amino acid adenylation domain YPO0776 IPR013217 Methyltransferase type 12 YPO0776 IPR013624 Non-ribosomal peptide synthetase YPO0776 IPR020845 AMP-binding, conserved site YPO0776 IPR029058 Alpha/Beta hydrolase fold YPO0776 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPO0777 IPR000873 AMP-dependent synthetase/ligase YPO0777 IPR009081 Acyl carrier protein-like YPO0777 IPR010071 Amino acid adenylation domain YPO0777 IPR020845 AMP-binding, conserved site YPO0778 IPR000873 AMP-dependent synthetase/ligase YPO0778 IPR001242 Condensation domain YPO0778 IPR006162 Phosphopantetheine attachment site YPO0778 IPR009081 Acyl carrier protein-like YPO0778 IPR010071 Amino acid adenylation domain YPO0778 IPR013624 Non-ribosomal peptide synthetase YPO0778 IPR020845 AMP-binding, conserved site YPO0779 IPR001270 ClpA/B family YPO0779 IPR002611 IstB-like ATP-binding protein YPO0779 IPR003593 AAA+ ATPase domain YPO0779 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0779 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO0780 IPR001584 Integrase, catalytic core YPO0780 IPR006120 Resolvase, HTH domain YPO0780 IPR009057 Homeodomain-like YPO0780 IPR012337 Ribonuclease H-like domain YPO0781 IPR012902 Prokaryotic N-terminal methylation site YPO0783 IPR000398 Thymidylate synthase YPO0783 IPR020940 Thymidylate synthase, active site YPO0783 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain YPO0784 IPR001640 Prolipoprotein diacylglyceryl transferase YPO0785 IPR000121 PEP-utilising enzyme, C-terminal YPO0785 IPR003018 GAF domain YPO0785 IPR006318 Phosphoenolpyruvate-utilising enzyme YPO0785 IPR008279 PEP-utilising enzyme, mobile domain YPO0785 IPR008731 Phosphotransferase system, enzyme I N-terminal YPO0785 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain YPO0785 IPR018274 PEP-utilising enzyme, active site YPO0785 IPR023151 PEP-utilising enzyme, conserved site YPO0785 IPR029016 GAF domain-like YPO0786 IPR000086 NUDIX hydrolase domain YPO0786 IPR015797 NUDIX hydrolase domain-like YPO0786 IPR020084 NUDIX hydrolase, conserved site YPO0786 IPR020476 NUDIX hydrolase YPO0786 IPR022927 RNA pyrophosphohydrolase RppH YPO0789 IPR004230 DNA mismatch repair protein MutH YPO0789 IPR011335 Restriction endonuclease type II-like YPO0789 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II YPO0790 IPR001395 Aldo/keto reductase YPO0790 IPR023210 NADP-dependent oxidoreductase domain YPO0792 IPR011701 Major facilitator superfamily YPO0792 IPR020846 Major facilitator superfamily domain YPO0792 IPR023727 Lysophospholipid transporter LplT YPO0793 IPR000873 AMP-dependent synthetase/ligase YPO0793 IPR002123 Phospholipid/glycerol acyltransferase YPO0793 IPR020845 AMP-binding, conserved site YPO0793 IPR023775 Bifunctional 2-acylglycerophosphoethanolamine acyltransferase/acyl synthetase Aas YPO0794 IPR006656 Molybdopterin oxidoreductase YPO0794 IPR006657 Molydopterin dinucleotide-binding domain YPO0794 IPR009010 Aspartate decarboxylase-like domain YPO0795 IPR000843 Transcription regulator HTH, LacI YPO0795 IPR010982 Lambda repressor-like, DNA-binding domain YPO0795 IPR028082 Periplasmic binding protein-like I YPO0796 IPR000183 Ornithine/DAP/Arg decarboxylase YPO0796 IPR002986 Diaminopimelate decarboxylase, LysA YPO0796 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal YPO0796 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal YPO0796 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal YPO0796 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site YPO0796 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site YPO0796 IPR029066 PLP-binding barrel YPO0797 IPR000847 Transcription regulator HTH, LysR YPO0797 IPR005119 LysR, substrate-binding YPO0797 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0798 IPR011701 Major facilitator superfamily YPO0798 IPR020846 Major facilitator superfamily domain YPO0799 IPR000847 Transcription regulator HTH, LysR YPO0799 IPR005119 LysR, substrate-binding YPO0799 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0800 IPR001279 Beta-lactamase-like YPO0801 IPR001853 DSBA-like thioredoxin domain YPO0801 IPR012336 Thioredoxin-like fold YPO0801 IPR023169 UPF0413, central domain YPO0802 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding YPO0802 IPR003660 HAMP linker domain YPO0802 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YPO0802 IPR004090 Chemotaxis methyl-accepting receptor YPO0804 IPR001867 Signal transduction response regulator, C-terminal YPO0804 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0804 IPR016032 Signal transduction response regulator, C-terminal effector YPO0805 IPR019114 Chaperone lipoprotein, PulS/OutS-like YPO0806 IPR000045 Prepilin type IV endopeptidase, peptidase domain YPO0806 IPR010627 Peptidase A24A, N-terminal YPO0806 IPR014032 Peptidase A24A, prepilin type IV, bacterial YPO0808 IPR007812 Type II secretion system protein L YPO0808 IPR024230 GspL, cytoplasmic actin-ATPase-like domain YPO0808 IPR025691 GspL periplasmic domain YPO0809 IPR005628 General secretion pathway protein K YPO0810 IPR010055 Type II secretion system protein J YPO0810 IPR012902 Prokaryotic N-terminal methylation site YPO0811 IPR003413 Type II secretion system protein I domain YPO0811 IPR010052 Type II secretion system protein I YPO0812 IPR002416 Type II secretion system protein H YPO0812 IPR012902 Prokaryotic N-terminal methylation site YPO0812 IPR022346 General secretion pathway, GspH YPO0813 IPR000983 Bacterial general secretion pathway protein G-type pilin YPO0813 IPR010054 General secretion pathway protein G YPO0813 IPR012902 Prokaryotic N-terminal methylation site YPO0813 IPR013545 Type II secretion system protein G YPO0814 IPR001992 Type II secretion system conserved site YPO0814 IPR003004 GspF/PilC family YPO0814 IPR018076 Type II secretion system F domain YPO0815 IPR001482 Type II secretion system protein E YPO0815 IPR003593 AAA+ ATPase domain YPO0815 IPR013369 Type II secretion system GspE YPO0815 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0816 IPR001775 GspD/PilQ family YPO0816 IPR004845 Type II secretion system GspD, conserved site YPO0816 IPR004846 Type II/III secretion system YPO0816 IPR005644 NolW-like YPO0816 IPR013356 Type II secretion system GspD YPO0817 IPR024961 YPO0817 YPO0818 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0818 IPR016032 Signal transduction response regulator, C-terminal effector YPO0819 IPR001765 Carbonic anhydrase YPO0819 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal YPO0822 IPR031605 YPO0822 YPO0823 IPR005546 Autotransporter beta-domain YPO0823 IPR006315 Outer membrane autotransporter barrel YPO0824 IPR003159 Polysaccharide lyase family 8, central domain YPO0824 IPR004103 Polysaccharide lyase family 8, C-terminal YPO0824 IPR008929 Chondroitin AC/alginate lyase YPO0824 IPR008979 Galactose-binding domain-like YPO0824 IPR011013 Galactose mutarotase-like domain YPO0824 IPR011071 Polysaccharide lyase family 8-like, C-terminal YPO0824 IPR012329 Polysaccharide lyase family 8, N-terminal YPO0824 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup YPO0824 IPR015176 Lyase, N-terminal YPO0824 IPR015177 Lyase, catalytic YPO0824 IPR024200 Chondroitin sulfate ABC endolyase YPO0825 IPR001270 ClpA/B family YPO0825 IPR002611 IstB-like ATP-binding protein YPO0825 IPR003593 AAA+ ATPase domain YPO0825 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0825 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO0826 IPR001584 Integrase, catalytic core YPO0826 IPR006120 Resolvase, HTH domain YPO0826 IPR009057 Homeodomain-like YPO0826 IPR012337 Ribonuclease H-like domain YPO0829 IPR000917 Sulfatase YPO0829 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha YPO0829 IPR017850 Alkaline-phosphatase-like, core domain YPO0831 IPR001034 HTH DeoR N-terminal domain YPO0831 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0831 IPR014036 DeoR C-terminal sensor domain YPO0832 IPR012062 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit GatZ/KbaZ YPO0832 IPR013785 Aldolase-type TIM barrel YPO0833 IPR001347 Sugar isomerase (SIS) YPO0833 IPR014180 Sugar isomerase, AgaS YPO0834 IPR004720 Phosphotransferase system, sorbose subfamily IIB component YPO0834 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup YPO0835 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit YPO0836 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component YPO0837 IPR004701 Phosphotransferase system, mannose-type IIA component YPO0838 IPR003764 N-acetylglucosamine-6-phosphate deacetylase YPO0838 IPR006680 Amidohydrolase 1 YPO0838 IPR011059 Metal-dependent hydrolase, composite domain YPO0838 IPR032466 YPO0838 YPO0839 IPR002347 Glucose/ribitol dehydrogenase YPO0839 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase YPO0839 IPR016040 NAD(P)-binding domain YPO0839 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPO0840 IPR008928 Six-hairpin glycosidase-like YPO0840 IPR010905 Glycosyl hydrolase, family 88 YPO0840 IPR012341 Six-hairpin glycosidase YPO0841 IPR007197 Radical SAM YPO0841 IPR013785 Aldolase-type TIM barrel YPO0841 IPR023867 Anaerobic sulphatase maturase, radical SAM YPO0841 IPR023885 4Fe4S-binding SPASM domain YPO0842 IPR000917 Sulfatase YPO0842 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha YPO0842 IPR017850 Alkaline-phosphatase-like, core domain YPO0842 IPR024607 Sulfatase, conserved site YPO0843 IPR016624 Uncharacterised conserved protein UCP014753 YPO0844 IPR000771 Ketose-bisphosphate aldolase, class-II YPO0844 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY YPO0844 IPR013785 Aldolase-type TIM barrel YPO0845 IPR002818 ThiJ/PfpI YPO0845 IPR029062 Class I glutamine amidotransferase-like YPO0846 IPR000843 Transcription regulator HTH, LacI YPO0846 IPR010982 Lambda repressor-like, DNA-binding domain YPO0846 IPR028082 Periplasmic binding protein-like I YPO0847 IPR011701 Major facilitator superfamily YPO0847 IPR020846 Major facilitator superfamily domain YPO0848 IPR000322 Glycoside hydrolase, family 31 YPO0848 IPR011013 Galactose mutarotase-like domain YPO0848 IPR017853 Glycoside hydrolase, superfamily YPO0848 IPR025887 Glycoside hydrolase family 31, N-terminal domain YPO0848 IPR033403 YPO0848 YPO0849 IPR000843 Transcription regulator HTH, LacI YPO0849 IPR010982 Lambda repressor-like, DNA-binding domain YPO0849 IPR028082 Periplasmic binding protein-like I YPO0850 IPR003192 Porin, LamB type YPO0850 IPR023738 Maltoporin YPO0850a IPR001996 Phosphotransferase system, IIB component, type 1 YPO0850a IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site YPO0852 IPR003476 Glycoside hydrolase, family 42 YPO0852 IPR013529 Glycoside hydrolase, family 42, N-terminal YPO0852 IPR013738 Beta-galactosidase trimerisation YPO0852 IPR013739 Beta-galactosidase C-terminal YPO0852 IPR013781 Glycoside hydrolase, catalytic domain YPO0852 IPR017853 Glycoside hydrolase, superfamily YPO0852 IPR029062 Class I glutamine amidotransferase-like YPO0853 IPR011683 Glycosyl hydrolase family 53 YPO0853 IPR013781 Glycoside hydrolase, catalytic domain YPO0853 IPR017853 Glycoside hydrolase, superfamily YPO0854 IPR000515 MetI-like domain YPO0855 IPR000515 MetI-like domain YPO0856 IPR006060 Maltose binding protein YPO0857 IPR003439 ABC transporter-like YPO0857 IPR003593 AAA+ ATPase domain YPO0857 IPR008995 Molybdate/tungstate binding, C-terminal YPO0857 IPR012340 Nucleic acid-binding, OB-fold YPO0857 IPR013611 Transport-associated OB, type 2 YPO0857 IPR017871 ABC transporter, conserved site YPO0857 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0858 IPR003439 ABC transporter-like YPO0858 IPR003593 AAA+ ATPase domain YPO0858 IPR017871 ABC transporter, conserved site YPO0858 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0859 IPR001851 ABC transporter, permease YPO0860 IPR025997 Periplasmic binding protein domain YPO0860 IPR028082 Periplasmic binding protein-like I YPO0863 IPR024453 YPO0863 YPO0864 IPR005149 Transcription regulator PadR N-terminal YPO0864 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0865 IPR024476 Protein of unknown function DUF3861 YPO0866 IPR008727 PAAR motif YPO0869 IPR021488 Protein of unknown function DUF3142 YPO0871 IPR015287 Colicin D immunity protein domain YPO0873 IPR008727 PAAR motif YPO0873 IPR016128 Pyosin/cloacin translocation domain YPO0874 IPR003812 Fido domain YPO0878 IPR009061 DNA binding domain, putative YPO0878 IPR010260 Bacteriophage P4, Orf88 YPO0879 IPR009241 Addiction module killer protein YPO0880 IPR002694 Zinc finger, CHC2-type YPO0880 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal YPO0880 IPR006171 Toprim domain YPO0880 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0880 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal YPO0880 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal YPO0880 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0881 IPR001387 Cro/C1-type helix-turn-helix domain YPO0881 IPR010982 Lambda repressor-like, DNA-binding domain YPO0881 IPR022452 Zinc finger/helix-turn-helix protein, YgiT YPO0881 IPR022453 Zinc finger, YgiT-type YPO0881 IPR032758 YPO0881 YPO0882 IPR031451 YPO0882 YPO0883 IPR001387 Cro/C1-type helix-turn-helix domain YPO0883 IPR010982 Lambda repressor-like, DNA-binding domain YPO0884 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family YPO0887 IPR002104 Integrase, catalytic YPO0887 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPO0887 IPR013762 Integrase-like, catalytic core YPO0887 IPR023109 Integrase/recombinase, N-terminal YPO0887 IPR025166 Domain of unknown function DUF4102 YPO0888 IPR002313 Lysine-tRNA ligase, class II YPO0888 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) YPO0888 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type YPO0888 IPR012340 Nucleic acid-binding, OB-fold YPO0888 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal YPO0888 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like YPO0890 IPR001667 DDH domain YPO0890 IPR003156 DHHA1 domain YPO0890 IPR004610 Bacterial RecJ exonuclease YPO0891 IPR009094 Disulphide bond isomerase, DsbC, N-terminal YPO0891 IPR012336 Thioredoxin-like fold YPO0891 IPR017937 Thioredoxin, conserved site YPO0891 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal YPO0892 IPR002104 Integrase, catalytic YPO0892 IPR004107 Integrase, SAM-like, N-terminal YPO0892 IPR010998 Integrase, Lambda-type, N-terminal YPO0892 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPO0892 IPR011932 Tyrosine recombinase XerD YPO0892 IPR013762 Integrase-like, catalytic core YPO0892 IPR023009 Tyrosine recombinase XerC/XerD YPO0892 IPR023109 Integrase/recombinase, N-terminal YPO0893 IPR001226 Flavodoxin, conserved site YPO0893 IPR008254 Flavodoxin/nitric oxide synthase YPO0893 IPR010086 Flavodoxin, long chain YPO0893 IPR029039 Flavoprotein-like YPO0894 IPR010364 Uncharacterised protein family, inner membrane CreD YPO0895 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO0895 IPR003660 HAMP linker domain YPO0895 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPO0895 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPO0895 IPR029150 Sensory domain of two-component sensor kinase YPO0895 IPR029151 Periplasmic sensor domain-like YPO0896 IPR001789 Signal transduction response regulator, receiver domain YPO0896 IPR001867 Signal transduction response regulator, C-terminal YPO0896 IPR011006 CheY-like superfamily YPO0896 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0896 IPR016032 Signal transduction response regulator, C-terminal effector YPO0896a IPR009883 Protein of unknown function DUF1434 YPO0897 IPR005631 Flavinator of succinate dehydrogenase YPO0898 IPR006222 Glycine cleavage T-protein, N-terminal YPO0898 IPR017703 YgfZ/GcvT conserved site YPO0898 IPR023758 tRNA-modifying protein YgfZ YPO0898 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain YPO0899 IPR018681 Protein of unknown function DUF2165, transmembrane YPO0900 IPR004254 Hly-III-related YPO0900 IPR005744 HylII YPO0904 IPR024311 Lipocalin-like domain YPO0905 IPR003437 Glycine cleavage system P protein, homodimeric YPO0905 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPO0905 IPR015424 Pyridoxal phosphate-dependent transferase YPO0905 IPR020580 Glycine cleavage system P-protein, N-terminal YPO0905 IPR020581 Glycine cleavage system P protein YPO0906 IPR002930 Glycine cleavage system H-protein YPO0906 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site YPO0906 IPR011053 Single hybrid motif YPO0906 IPR017453 Glycine cleavage system H-protein, subgroup YPO0907 IPR006222 Glycine cleavage T-protein, N-terminal YPO0907 IPR006223 Glycine cleavage system T protein YPO0907 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain YPO0907 IPR022903 Glycine cleavage system T protein, bacteria YPO0907 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 YPO0907 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA YPO0907 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain YPO0908 IPR002938 Monooxygenase, FAD-binding YPO0908 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 YPO0908 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site YPO0908 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPO0909 IPR002938 Monooxygenase, FAD-binding YPO0909 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 YPO0909 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase YPO0909 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site YPO0909 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPO0910 IPR000994 Peptidase M24, structural domain YPO0910 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site YPO0910 IPR001714 Peptidase M24, methionine aminopeptidase YPO0910 IPR007865 Aminopeptidase P, N-terminal YPO0910 IPR028980 Creatinase/Aminopeptidase P, N-terminal YPO0910 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal YPO0911 IPR011978 Uncharacterised protein family UPF0149 YPO0912 IPR007838 Cell division protein ZapA-like YPO0912 IPR023771 Cell division protein ZapA, eubacteria YPO0913 IPR002698 5-formyltetrahydrofolate cyclo-ligase YPO0913 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain YPO0914 IPR002912 ACT domain YPO0914 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPO0914 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain YPO0914 IPR016040 NAD(P)-binding domain YPO0914 IPR029015 D-3-phosphoglycerate dehydrogenase, type2 YPO0914 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YPO0914 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YPO0915 IPR004788 Ribose 5-phosphate isomerase, type A YPO0915 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup YPO0916 IPR000847 Transcription regulator HTH, LysR YPO0916 IPR005119 LysR, substrate-binding YPO0916 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0916 IPR017685 Transcription regulator ArgP YPO0916 IPR023490 Chromosome initiation inhibitor YPO0917 IPR007497 Protein of unknown function DUF541 YPO0918 IPR001123 Lysine-type exporter protein (LYSE/YGGA) YPO0918 IPR004777 L-lysine exporter/arginine exporter YPO0918 IPR023445 Arginine exporter protein ArgO, enterobacteria YPO0919 IPR006685 Mechanosensitive ion channel MscS YPO0919 IPR006686 Mechanosensitive ion channel MscS, conserved site YPO0919 IPR008910 Conserved TM helix YPO0919 IPR010920 Like-Sm (LSM) domain YPO0919 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 YPO0919 IPR011066 Mechanosensitive ion channel MscS, C-terminal YPO0920 IPR000771 Ketose-bisphosphate aldolase, class-II YPO0920 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype YPO0920 IPR013785 Aldolase-type TIM barrel YPO0921 IPR001576 Phosphoglycerate kinase YPO0921 IPR015824 Phosphoglycerate kinase, N-terminal YPO0921 IPR015901 Phosphoglycerate kinase, C-terminal YPO0921 IPR015911 Phosphoglycerate kinase, conserved site YPO0922 IPR006422 D-erythrose-4-phosphate dehydrogenase YPO0922 IPR016040 NAD(P)-binding domain YPO0922 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain YPO0922 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain YPO0922 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site YPO0922 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family YPO0923 IPR001270 ClpA/B family YPO0923 IPR002611 IstB-like ATP-binding protein YPO0923 IPR003593 AAA+ ATPase domain YPO0923 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0923 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO0924 IPR001584 Integrase, catalytic core YPO0924 IPR006120 Resolvase, HTH domain YPO0924 IPR009057 Homeodomain-like YPO0924 IPR012337 Ribonuclease H-like domain YPO0925 IPR002686 Transposase IS200-like YPO0926 IPR005474 Transketolase, N-terminal YPO0926 IPR005475 Transketolase-like, pyrimidine-binding domain YPO0926 IPR005478 Transketolase, bacterial-like YPO0926 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II YPO0926 IPR020826 Transketolase binding site YPO0926 IPR029061 Thiamin diphosphate-binding fold YPO0926 IPR033247 YPO0926 YPO0926 IPR033248 YPO0926 YPO0927 IPR001915 Peptidase M48 YPO0928 IPR017941 Rieske [2Fe-2S] iron-sulphur domain YPO0929 IPR000183 Ornithine/DAP/Arg decarboxylase YPO0929 IPR002985 Arginine decarboxylase YPO0929 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal YPO0929 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal YPO0929 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal YPO0929 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site YPO0929 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site YPO0929 IPR029066 PLP-binding barrel YPO0931 IPR002133 S-adenosylmethionine synthetase YPO0931 IPR022628 S-adenosylmethionine synthetase, N-terminal YPO0931 IPR022629 S-adenosylmethionine synthetase, central domain YPO0931 IPR022630 S-adenosylmethionine synthetase, C-terminal YPO0931 IPR022631 S-adenosylmethionine synthetase, conserved site YPO0931 IPR022636 S-adenosylmethionine synthetase superfamily YPO0932 IPR006640 Domain of unknown function SprT-like YPO0932 IPR023483 Uncharacterised protein family SprT YPO0933 IPR007346 Endonuclease I YPO0934 IPR006700 Ribosomal RNA small subunit methyltransferase E YPO0934 IPR015947 PUA-like domain YPO0934 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPO0934 IPR029028 Alpha/beta knot methyltransferases YPO0935 IPR004215 Prokaryotic glutathione synthetase, N-terminal YPO0935 IPR004218 Prokaryotic glutathione synthetase, ATP-binding YPO0935 IPR006284 Glutathione synthetase, prokaryotic YPO0935 IPR013815 ATP-grasp fold, subdomain 1 YPO0935 IPR013816 ATP-grasp fold, subdomain 2 YPO0935 IPR016185 Pre-ATP-grasp domain YPO0936 IPR003774 Protein of unknown function UPF0301 YPO0937 IPR005227 Resolvase, holliday junction-type, YqgF-like YPO0937 IPR006641 YqgF/RNase H-like domain YPO0937 IPR012337 Ribonuclease H-like domain YPO0938 IPR003010 Carbon-nitrogen hydrolase YPO0938 IPR017755 N-carbamoylputrescine amidase YPO0939 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type YPO0939 IPR017754 Agmatine deiminase YPO0940 IPR001482 Type II secretion system protein E YPO0940 IPR003593 AAA+ ATPase domain YPO0940 IPR006321 Pilus retraction protein PilT YPO0940 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0941 IPR001608 Alanine racemase, N-terminal YPO0941 IPR011078 Uncharacterised protein family UPF0001 YPO0941 IPR029066 PLP-binding barrel YPO0942 IPR000304 Pyrroline-5-carboxylate reductase YPO0942 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YPO0942 IPR016040 NAD(P)-binding domain YPO0942 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal YPO0942 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain YPO0943 IPR003425 Uncharacterised protein family Ycf19 YPO0944 IPR003746 Protein of unknown function DUF167 YPO0944 IPR005228 Conserved hypothetical protein CHP00251 YPO0945 IPR002637 Ham1-like protein YPO0945 IPR020922 Non-canonical purine NTP pyrophosphatase YPO0945 IPR029001 Inosine triphosphate pyrophosphatase-like YPO0946 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related YPO0946 IPR006638 Elongator protein 3/MiaB/NifB YPO0946 IPR007197 Radical SAM YPO0946 IPR010723 HemN, C-terminal domain YPO0946 IPR023404 Radical SAM, alpha/beta horseshoe YPO0947 IPR011049 Serralysin-like metalloprotease, C-terminal YPO0947 IPR020974 Peptidase C80, RTX cysteine protease domain YPO0949 IPR012338 Beta-lactamase/transpeptidase-like YPO0949 IPR015868 Glutaminase YPO0950 IPR007416 Protein of unknown function DUF469 YPO0951 IPR003358 tRNA (guanine-N-7) methyltransferase YPO0951 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPO0952 IPR000445 Helix-hairpin-helix motif YPO0952 IPR003265 HhH-GPD domain YPO0952 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif YPO0952 IPR004035 Endonuclease III, iron-sulphur binding site YPO0952 IPR004036 Endonuclease III-like, conserved site-2 YPO0952 IPR005760 A/G-specific adenine glycosylase MutY YPO0952 IPR011257 DNA glycosylase YPO0952 IPR015797 NUDIX hydrolase domain-like YPO0952 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal YPO0952 IPR029119 MutY, C-terminal YPO0953 IPR007457 Fe(II) trafficking protein YggX YPO0954 IPR000189 Prokaryotic transglycosylase, active site YPO0954 IPR008258 Lytic transglycosylase-like SLT domain YPO0954 IPR023346 Lysozyme-like domain YPO0954 IPR023664 Murein transglycosylase-C YPO0954 IPR024570 Murein transglycosylase-C, N-terminal YPO0955 IPR002491 ABC transporter periplasmic binding domain YPO0956 IPR000531 TonB-dependent receptor, beta-barrel YPO0956 IPR010105 TonB-dependent siderophore receptor YPO0956 IPR012910 TonB-dependent receptor, plug YPO0957 IPR001851 ABC transporter, permease YPO0958 IPR003439 ABC transporter-like YPO0958 IPR003593 AAA+ ATPase domain YPO0958 IPR017871 ABC transporter, conserved site YPO0958 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0959 IPR025997 Periplasmic binding protein domain YPO0959 IPR028082 Periplasmic binding protein-like I YPO0960 IPR000310 Orn/Lys/Arg decarboxylase, major domain YPO0960 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal YPO0960 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal YPO0960 IPR011006 CheY-like superfamily YPO0960 IPR011193 Ornithine/lysine/arginine decarboxylase YPO0960 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPO0960 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPO0960 IPR015424 Pyridoxal phosphate-dependent transferase YPO0960 IPR027464 Ornithine decarboxylase, N-terminal domain YPO0960 IPR027568 Ornithine decarboxylase SpeF YPO0963 IPR005063 Transposase, IS1 YPO0964 IPR003220 InsA N-terminal domain YPO0964 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain YPO0966 IPR011055 Duplicated hybrid motif YPO0966 IPR016047 Peptidase M23 YPO0966 IPR023346 Lysozyme-like domain YPO0968 IPR003220 InsA N-terminal domain YPO0968 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain YPO0969 IPR023346 Lysozyme-like domain YPO0970 IPR006531 Gp5 N-terminal YPO0970 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPO0970 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPO0970 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal YPO0970 IPR027440 Capsid protein alpha-like domain YPO0970 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain YPO0971 IPR001270 ClpA/B family YPO0971 IPR003593 AAA+ ATPase domain YPO0971 IPR003959 ATPase, AAA-type, core YPO0971 IPR004176 Clp, N-terminal YPO0971 IPR017729 Type VI secretion system, ATPase ClpV1 YPO0971 IPR018368 ClpA/B, conserved site 1 YPO0971 IPR019489 Clp ATPase, C-terminal YPO0971 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO0973 IPR008514 Type VI secretion system effector, Hcp YPO0974 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal YPO0975 IPR017732 Type IV / VI secretion system, DotU YPO0976 IPR010263 Protein of unknown function DUF876 YPO0977 IPR010269 Protein of unknown function DUF877 YPO0978 IPR008312 Uncharacterised conserved protein UCP028301 YPO0981 IPR003220 InsA N-terminal domain YPO0981 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain YPO0983 IPR003675 CAAX amino terminal protease YPO0984 IPR001690 Autoinducer synthesis protein YPO0984 IPR016181 Acyl-CoA N-acyltransferase YPO0984 IPR018311 Autoinducer synthesis, conserved site YPO0985 IPR000792 Transcription regulator LuxR, C-terminal YPO0985 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain YPO0985 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0985 IPR016032 Signal transduction response regulator, C-terminal effector YPO0986 IPR010126 Esterase, PHB depolymerase YPO0986 IPR029058 Alpha/Beta hydrolase fold YPO0987 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal YPO0987 IPR015889 Intradiol ring-cleavage dioxygenase, core YPO0988 IPR011701 Major facilitator superfamily YPO0988 IPR020846 Major facilitator superfamily domain YPO0991 IPR016181 Acyl-CoA N-acyltransferase YPO0991 IPR019432 Siderophore biosynthesis protein, conserved domain YPO0992 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal YPO0992 IPR022770 Ferric iron reductase FhuF domain YPO0993 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPO0993 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase YPO0994 IPR000531 TonB-dependent receptor, beta-barrel YPO0994 IPR010105 TonB-dependent siderophore receptor YPO0994 IPR010917 TonB-dependent receptor, conserved site YPO0994 IPR012910 TonB-dependent receptor, plug YPO0995 IPR001927 Sodium:galactoside symporter YPO0995 IPR020846 Major facilitator superfamily domain YPO0996 IPR009057 Homeodomain-like YPO0996 IPR010921 Trp repressor/replication initiator YPO0996 IPR011991 Winged helix-turn-helix DNA-binding domain YPO0997 IPR001584 Integrase, catalytic core YPO0997 IPR012337 Ribonuclease H-like domain YPO0997 IPR025948 HTH-like domain YPO0998 IPR000014 PAS domain YPO0998 IPR000160 GGDEF domain YPO0998 IPR001633 EAL domain YPO0998 IPR007892 CHASE4 YPO0998 IPR013767 PAS fold YPO0998 IPR029787 Nucleotide cyclase YPO1000 IPR006143 RND efflux pump, membrane fusion protein YPO1000 IPR032317 YPO1000 YPO1001 IPR001036 Acriflavin resistance protein YPO1001 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 YPO1001 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPO1002 IPR012927 ShET2 enterotoxin, N-terminal YPO1004 IPR005546 Autotransporter beta-domain YPO1004 IPR006315 Outer membrane autotransporter barrel YPO1004 IPR011050 Pectin lyase fold/virulence factor YPO1004 IPR012332 P22 tailspike C-terminal domain-like YPO1004 IPR024973 ESPR domain YPO1005 IPR029487 Novel E3 ligase domain YPO1005 IPR032674 YPO1005 YPO1005 IPR032675 YPO1005 YPO1006 IPR032674 YPO1006 YPO1006 IPR032675 YPO1006 YPO1007 IPR003591 Leucine-rich repeat, typical subtype YPO1007 IPR029487 Novel E3 ligase domain YPO1007 IPR032674 YPO1007 YPO1007 IPR032675 YPO1007 YPO1008 IPR004697 AbgT YPO1009 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site YPO1009 IPR002933 Peptidase M20 YPO1009 IPR010161 Peptidase M20B, tripeptide aminopeptidase YPO1009 IPR011650 Peptidase M20, dimerisation domain YPO1011 IPR000531 TonB-dependent receptor, beta-barrel YPO1011 IPR012910 TonB-dependent receptor, plug YPO1012 IPR000873 AMP-dependent synthetase/ligase YPO1012 IPR009081 Acyl carrier protein-like YPO1012 IPR014030 Beta-ketoacyl synthase, N-terminal YPO1012 IPR014031 Beta-ketoacyl synthase, C-terminal YPO1012 IPR016039 Thiolase-like YPO1012 IPR018201 Beta-ketoacyl synthase, active site YPO1012 IPR020806 Polyketide synthase, phosphopantetheine-binding domain YPO1012 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPO1013 IPR001584 Integrase, catalytic core YPO1013 IPR006120 Resolvase, HTH domain YPO1013 IPR009057 Homeodomain-like YPO1013 IPR012337 Ribonuclease H-like domain YPO1014 IPR001270 ClpA/B family YPO1014 IPR002611 IstB-like ATP-binding protein YPO1014 IPR003593 AAA+ ATPase domain YPO1014 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1014 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO1015 IPR012902 Prokaryotic N-terminal methylation site YPO1015 IPR016419 Prepilin peptidase-dependent protein B, predicted YPO1016 IPR019652 Protein of unknown function DUF2509 YPO1017 IPR012902 Prokaryotic N-terminal methylation site YPO1017 IPR022204 Prepilin peptidase dependent protein C YPO1018 IPR006697 Exodeoxyribonuclease V, gamma subunit YPO1018 IPR011335 Restriction endonuclease type II-like YPO1018 IPR013986 DExx box DNA helicase domain YPO1018 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1019 IPR001431 Peptidase M16, zinc-binding site YPO1019 IPR007863 Peptidase M16, C-terminal domain YPO1019 IPR011237 Peptidase M16 domain YPO1019 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like YPO1019 IPR011765 Peptidase M16, N-terminal YPO1019 IPR032632 YPO1019 YPO1020 IPR000212 DNA helicase, UvrD/REP type YPO1020 IPR004586 Exodeoxyribonuclease V, beta subunit YPO1020 IPR011335 Restriction endonuclease type II-like YPO1020 IPR011604 Exonuclease, phage-type/RecB, C-terminal YPO1020 IPR014016 UvrD-like Helicase, ATP-binding domain YPO1020 IPR014017 DNA helicase, UvrD-like, C-terminal YPO1020 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1021 IPR006344 Exodeoxyribonuclease V, alpha subunit YPO1021 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1021 IPR027785 UvrD-like helicase C-terminal domain YPO1022 IPR000182 GNAT domain YPO1022 IPR001048 Aspartate/glutamate/uridylate kinase YPO1022 IPR010167 Amino-acid N-acetyltransferase (ArgA) YPO1022 IPR016181 Acyl-CoA N-acyltransferase YPO1023 IPR002508 Cell wall hydrolase/autolysin, catalytic YPO1023 IPR021731 AMIN domain YPO1025 IPR005300 Lytic transglycosylase MltA YPO1025 IPR009009 RlpA-like double-psi beta-barrel domain YPO1025 IPR010611 3D domain YPO1025 IPR026044 Membrane-bound lytic murein transglycosylase A YPO1026 IPR000594 UBA/THIF-type NAD/FAD binding fold YPO1026 IPR016040 NAD(P)-binding domain YPO1027 IPR003808 Fe-S metabolism associated domain, SufE-like YPO1027 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE YPO1028 IPR000192 Aminotransferase class V domain YPO1028 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPO1028 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPO1028 IPR015424 Pyridoxal phosphate-dependent transferase YPO1028 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site YPO1028 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA YPO1029 IPR000847 Transcription regulator HTH, LysR YPO1029 IPR005119 LysR, substrate-binding YPO1029 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1030 IPR006696 Protein of unknown function DUF423 YPO1031 IPR002877 Ribosomal RNA methyltransferase FtsJ domain YPO1031 IPR011224 Ribosomal RNA large subunit methyltransferase M YPO1031 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPO1032 IPR002421 5'-3' exonuclease, N-terminal YPO1032 IPR008918 Helix-hairpin-helix motif, class 2 YPO1032 IPR020045 5'-3' exonuclease, C-terminal domain YPO1032 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal YPO1032 IPR022895 Flap endonuclease Xni YPO1032 IPR029060 PIN domain-like YPO1033 IPR021826 Protein of unknown function DUF3412 YPO1033 IPR027820 Domain of unknown function DUF4478 YPO1033 IPR031100 YPO1033 YPO1034 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 YPO1034 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal YPO1034 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF YPO1035 IPR009948 Syd YPO1036 IPR002686 Transposase IS200-like YPO1037 IPR007384 Protein of unknown function UCP006257 YPO1037 IPR023376 YqcC-like domain YPO1038 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F YPO1038 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site YPO1038 IPR020103 Pseudouridine synthase, catalytic domain YPO1039 IPR001094 Flavodoxin YPO1039 IPR008254 Flavodoxin/nitric oxide synthase YPO1039 IPR029039 Flavoprotein-like YPO1040 IPR020911 Uncharacterised protein family UPF0325 YPO1041 IPR001451 Bacterial transferase hexapeptide repeat YPO1041 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family YPO1041 IPR011004 Trimeric LpxA-like YPO1041 IPR018357 Hexapeptide transferase, conserved site YPO1041 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 YPO1042 IPR002912 ACT domain YPO1042 IPR002934 Nucleotidyl transferase domain YPO1042 IPR003607 HD/PDEase domain YPO1042 IPR006674 HD domain YPO1042 IPR010043 Protein-PII uridylyltransferase YPO1042 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase YPO1043 IPR000994 Peptidase M24, structural domain YPO1043 IPR001714 Peptidase M24, methionine aminopeptidase YPO1043 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 YPO1044 IPR001865 Ribosomal protein S2 YPO1044 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid YPO1044 IPR018130 Ribosomal protein S2, conserved site YPO1044 IPR023591 Ribosomal protein S2, flavodoxin-like domain YPO1045 IPR001816 Translation elongation factor EFTs/EF1B YPO1045 IPR009060 UBA-like YPO1045 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation YPO1045 IPR018101 Translation elongation factor Ts, conserved site YPO1046 IPR001048 Aspartate/glutamate/uridylate kinase YPO1046 IPR011817 Uridylate kinase YPO1046 IPR015963 Uridylate kinase, bacteria YPO1047 IPR002661 Ribosome recycling factor YPO1047 IPR023584 Ribosome recycling factor domain YPO1048 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase YPO1048 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal YPO1048 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal YPO1048 IPR016040 NAD(P)-binding domain YPO1048 IPR026877 DXP reductoisomerase C-terminal domain YPO1049 IPR001441 Decaprenyl diphosphate synthase-like YPO1049 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site YPO1050 IPR000374 Phosphatidate cytidylyltransferase YPO1051 IPR001478 PDZ domain YPO1051 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase YPO1051 IPR008915 Peptidase M50 YPO1052 IPR000184 Bacterial surface antigen (D15) YPO1052 IPR010827 Surface antigen variable number YPO1052 IPR023707 Outer membrane protein assembly factor BamA YPO1053 IPR005632 Chaperone protein Skp YPO1053 IPR024930 Skp domain YPO1054 IPR001451 Bacterial transferase hexapeptide repeat YPO1054 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YPO1054 IPR011004 Trimeric LpxA-like YPO1054 IPR018357 Hexapeptide transferase, conserved site YPO1054 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region YPO1055 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ YPO1055 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ YPO1055 IPR029069 HotDog domain YPO1056 IPR001451 Bacterial transferase hexapeptide repeat YPO1056 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase YPO1056 IPR011004 Trimeric LpxA-like YPO1056 IPR018357 Hexapeptide transferase, conserved site YPO1056 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal YPO1057 IPR003835 Glycosyl transferase, family 19 YPO1058 IPR001352 Ribonuclease HII/HIII YPO1058 IPR012337 Ribonuclease H-like domain YPO1058 IPR022898 Ribonuclease HII YPO1058 IPR024567 Ribonuclease HII/HIII domain YPO1059 IPR003141 Polymerase/histidinol phosphatase, N-terminal YPO1059 IPR004013 PHP, C-terminal YPO1059 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type YPO1059 IPR004805 DNA polymerase III, alpha subunit YPO1059 IPR011708 Bacterial DNA polymerase III, alpha subunit YPO1059 IPR012340 Nucleic acid-binding, OB-fold YPO1059 IPR016195 Polymerase/histidinol phosphatase-like YPO1059 IPR029460 DNA polymerase, helix-hairpin-helix motif YPO1060 IPR001095 Acetyl-CoA carboxylase, alpha subunit YPO1060 IPR029045 ClpP/crotonase-like domain YPO1061 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain YPO1061 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase YPO1062 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase YPO1062 IPR012094 Lysidine-tRNA(Ile) synthetase YPO1062 IPR012795 Lysidine-tRNA(Ile) synthetase, N-terminal YPO1062 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal YPO1062 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO1062 IPR015262 Lysidine-tRNA(Ile) synthetase, substrate-binding domain YPO1062 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 YPO1063 IPR008168 Cytochrome c, class IC YPO1063 IPR009056 Cytochrome c-like domain YPO1064 IPR009778 Modulator of Rho-dependent transcription termination YPO1064 IPR023534 Rof/RNase P-like YPO1064a IPR009624 Uncharacterised protein family UPF0253 YPO1065 IPR009822 YaeQ YPO1065 IPR011335 Restriction endonuclease type II-like YPO1066 IPR000352 Peptide chain release factor class I/class II YPO1067 IPR007298 Copper resistance lipoprotein NlpE YPO1067 IPR033450 YPO1067 YPO1068 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain YPO1068 IPR002316 Proline-tRNA ligase, class IIa YPO1068 IPR004154 Anticodon-binding YPO1068 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type YPO1068 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain YPO1068 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 YPO1069 IPR023368 Uncharacterised protein family UPF0066, conserved site YPO1069 IPR023370 TsaA-like domain YPO1070 IPR030852 YPO1070 YPO1071 IPR004872 Lipoprotein NlpA family YPO1072 IPR000515 MetI-like domain YPO1073 IPR003439 ABC transporter-like YPO1073 IPR003593 AAA+ ATPase domain YPO1073 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria YPO1073 IPR017871 ABC transporter, conserved site YPO1073 IPR018449 NIL domain YPO1073 IPR026253 Methionine import ATP-binding protein MetN YPO1073 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1074 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase YPO1074 IPR006543 Histidinol-phosphate phosphatase YPO1074 IPR006549 HAD-superfamily hydrolase,subfamily IIIA YPO1074 IPR023214 HAD-like domain YPO1075 IPR001395 Aldo/keto reductase YPO1075 IPR018170 Aldo/keto reductase, conserved site YPO1075 IPR020471 Aldo/keto reductase subgroup YPO1075 IPR023210 NADP-dependent oxidoreductase domain YPO1077 IPR005135 Endonuclease/exonuclease/phosphatase YPO1078 IPR000189 Prokaryotic transglycosylase, active site YPO1078 IPR008258 Lytic transglycosylase-like SLT domain YPO1078 IPR013321 Arc-type ribbon-helix-helix YPO1078 IPR018392 LysM domain YPO1078 IPR023346 Lysozyme-like domain YPO1079 IPR001279 Beta-lactamase-like YPO1079 IPR017782 Hydroxyacylglutathione hydrolase YPO1079 IPR032282 YPO1079 YPO1080 IPR013216 Methyltransferase type 11 YPO1080 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPO1081 IPR002156 Ribonuclease H domain YPO1081 IPR012337 Ribonuclease H-like domain YPO1081 IPR022892 Ribonuclease H YPO1082 IPR006054 DNA polymerase III, epsilon subunit YPO1082 IPR006309 DNA polymerase 3, epsilon subunit YPO1082 IPR012337 Ribonuclease H-like domain YPO1082 IPR013520 Exonuclease, RNase T/DNA polymerase III YPO1083 IPR001248 Permease, cytosine/purines, uracil, thiamine, allantoin YPO1084 IPR002509 Polysaccharide deacetylase YPO1084 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YPO1085 IPR001270 ClpA/B family YPO1085 IPR002611 IstB-like ATP-binding protein YPO1085 IPR003593 AAA+ ATPase domain YPO1085 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1085 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO1086 IPR001584 Integrase, catalytic core YPO1086 IPR006120 Resolvase, HTH domain YPO1086 IPR009057 Homeodomain-like YPO1086 IPR012337 Ribonuclease H-like domain YPO1088 IPR010982 Lambda repressor-like, DNA-binding domain YPO1088 IPR014057 Addiction module antidote protein, HI1420 YPO1089 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1090 IPR002694 Zinc finger, CHC2-type YPO1090 IPR006171 Toprim domain YPO1090 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal YPO1091 IPR018880 Bacteriophage P4, Ash protein YPO1092 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPO1092 IPR013762 Integrase-like, catalytic core YPO1092 IPR023109 Integrase/recombinase, N-terminal YPO1092 IPR024456 Integrase catalytic domain, putative YPO1092 IPR024457 Putative integrase, N-terminal YPO1097 IPR025382 Domain of unknown function DUF4297 YPO1098 IPR002104 Integrase, catalytic YPO1098 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPO1098 IPR013762 Integrase-like, catalytic core YPO1098 IPR023109 Integrase/recombinase, N-terminal YPO1098 IPR025166 Domain of unknown function DUF4102 YPO1099 IPR002686 Transposase IS200-like YPO1101 IPR000037 SsrA-binding protein YPO1101 IPR020081 SsrA-binding protein, conserved site YPO1101 IPR023620 Small protein B YPO1102 IPR005031 Streptomyces cyclase/dehydrase YPO1102 IPR023393 START-like domain YPO1103 IPR005346 RnfH protein YPO1103 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp YPO1104 IPR007450 Lipoprotein SmpA/OmlA YPO1104 IPR026592 Outer membrane protein assembly factor BamE YPO1105 IPR003395 RecF/RecN/SMC, N-terminal YPO1105 IPR004604 DNA recombination/repair protein RecN YPO1105 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1106 IPR002504 Inorganic polyphosphate/ATP-NAD kinase YPO1106 IPR016064 ATP-NAD kinase-like domain YPO1106 IPR017437 ATP-NAD kinase, PpnK-type, all-beta YPO1106 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 YPO1107 IPR000740 GrpE nucleotide exchange factor YPO1107 IPR009012 GrpE nucleotide exchange factor, head YPO1107 IPR013805 GrpE nucleotide exchange factor, coiled-coil YPO1108 IPR002020 Citrate synthase-like YPO1108 IPR010953 Citrate synthase, type I YPO1108 IPR016142 Citrate synthase-like, large alpha subdomain YPO1108 IPR016143 Citrate synthase-like, small alpha subdomain YPO1108 IPR019810 Citrate synthase active site YPO1108 IPR024176 Citrate synthase, bacterial-type YPO1109 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit YPO1109 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit YPO1109 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site YPO1110 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor YPO1111 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site YPO1111 IPR003953 FAD binding domain YPO1111 IPR011281 Succinate dehydrogenase, flavoprotein subunit YPO1111 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit YPO1111 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal YPO1111 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPO1111 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain YPO1111 IPR030664 YPO1111 YPO1112 IPR001041 2Fe-2S ferredoxin-type domain YPO1112 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein YPO1112 IPR009051 Alpha-helical ferredoxin YPO1112 IPR012675 Beta-grasp domain YPO1112 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO1112 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal YPO1113 IPR001017 Dehydrogenase, E1 component YPO1113 IPR005475 Transketolase-like, pyrimidine-binding domain YPO1113 IPR011603 2-oxoglutarate dehydrogenase E1 component YPO1113 IPR029061 Thiamin diphosphate-binding fold YPO1113 IPR031717 YPO1113 YPO1113 IPR032106 YPO1113 YPO1114 IPR000089 Biotin/lipoyl attachment YPO1114 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain YPO1114 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site YPO1114 IPR004167 E3 binding YPO1114 IPR006255 Dihydrolipoamide succinyltransferase YPO1114 IPR011053 Single hybrid motif YPO1114 IPR023213 Chloramphenicol acetyltransferase-like domain YPO1115 IPR005809 Succinyl-CoA synthetase, beta subunit YPO1115 IPR005811 ATP-citrate lyase/succinyl-CoA ligase YPO1115 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type YPO1115 IPR013815 ATP-grasp fold, subdomain 1 YPO1115 IPR013816 ATP-grasp fold, subdomain 2 YPO1115 IPR016102 Succinyl-CoA synthetase-like YPO1115 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site YPO1116 IPR003781 CoA-binding YPO1116 IPR005810 Succinyl-CoA ligase, alpha subunit YPO1116 IPR005811 ATP-citrate lyase/succinyl-CoA ligase YPO1116 IPR016040 NAD(P)-binding domain YPO1116 IPR016102 Succinyl-CoA synthetase-like YPO1116 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site YPO1117 IPR002585 Cytochrome d ubiquinol oxidase, subunit I YPO1118 IPR003317 Cytochrome d ubiquinol oxidase, subunit II YPO1119 IPR011846 Cyd operon protein YbgE YPO1120 IPR006683 Thioesterase superfamily YPO1120 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family YPO1120 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase YPO1120 IPR029069 HotDog domain YPO1121 IPR002898 MotA/TolQ/ExbB proton channel YPO1121 IPR014163 Tol-Pal system, TolQ YPO1122 IPR003400 Biopolymer transport protein ExbD/TolR YPO1122 IPR014168 Biopolymer transport, TolR YPO1123 IPR014161 Tol-Pal system, TolA YPO1124 IPR007195 TolB, N-terminal YPO1124 IPR011659 WD40-like Beta Propeller YPO1124 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB YPO1124 IPR015943 WD40/YVTN repeat-like-containing domain YPO1125 IPR006664 Outer membrane protein, bacterial YPO1125 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal YPO1125 IPR006690 Outer membrane protein, OmpA-like, conserved site YPO1125 IPR014169 Peptidoglycan-associated lipoprotein YPO1126 IPR011990 Tetratricopeptide-like helical domain YPO1126 IPR014162 Tol-Pal system, YbgF YPO1126 IPR032519 YPO1126 YPO1127 IPR003473 Quinolinate synthetase A YPO1127 IPR023513 Quinolinate synthase A, type 1 YPO1128 IPR006419 Nicotinamide mononucleotide transporter PnuC YPO1129 IPR002524 Cation efflux protein YPO1129 IPR023500 Zinc transporter ZitB YPO1129 IPR027469 Cation efflux protein transmembrane domain YPO1129a IPR006218 DAHP synthetase I/KDSA YPO1129a IPR006219 DHAP synthase, class 1 YPO1129a IPR013785 Aldolase-type TIM barrel YPO1131 IPR001270 ClpA/B family YPO1131 IPR002611 IstB-like ATP-binding protein YPO1131 IPR003593 AAA+ ATPase domain YPO1131 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1131 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO1132 IPR001584 Integrase, catalytic core YPO1132 IPR006120 Resolvase, HTH domain YPO1132 IPR009057 Homeodomain-like YPO1132 IPR012337 Ribonuclease H-like domain YPO1133 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site YPO1133 IPR005952 Phosphoglycerate mutase 1 YPO1133 IPR013078 Histidine phosphatase superfamily, clade-1 YPO1133 IPR029033 Histidine phosphatase superfamily YPO1134 IPR011690 Phosphate-starvation-induced PsiF repeat YPO1137 IPR000705 Galactokinase YPO1137 IPR006203 GHMP kinase, ATP-binding, conserved site YPO1137 IPR006204 GHMP kinase N-terminal domain YPO1137 IPR006206 Mevalonate/galactokinase YPO1137 IPR013750 GHMP kinase, C-terminal domain YPO1137 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPO1137 IPR019539 Galactokinase galactose-binding domain YPO1137 IPR019741 Galactokinase, conserved site YPO1137 IPR020568 Ribosomal protein S5 domain 2-type fold YPO1137 IPR022963 Galactokinase, bacterial YPO1138 IPR001937 Galactose-1-phosphate uridyl transferase, class I YPO1138 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal YPO1138 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal YPO1138 IPR011146 HIT-like domain YPO1138 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site YPO1139 IPR005886 UDP-glucose 4-epimerase GalE YPO1139 IPR016040 NAD(P)-binding domain YPO1140 IPR003675 CAAX amino terminal protease YPO1142 IPR003439 ABC transporter-like YPO1142 IPR003593 AAA+ ATPase domain YPO1142 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1143 IPR000847 Transcription regulator HTH, LysR YPO1143 IPR003725 Molybdenum-binding protein, N-terminal YPO1143 IPR004606 Molybdenum-pterin binding YPO1143 IPR005116 Transport-associated OB, type 1 YPO1143 IPR008995 Molybdate/tungstate binding, C-terminal YPO1143 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1143 IPR016462 Molybdate-dependent transcriptional regulator, ModE YPO1144 IPR019702 Protein of unknown function DUF2592 YPO1145 IPR005950 Molybdenum ABC transporter, periplasmic binding protein YPO1146 IPR000515 MetI-like domain YPO1146 IPR011867 Molybdate ABC transporter, permease protein YPO1147 IPR003439 ABC transporter-like YPO1147 IPR003593 AAA+ ATPase domain YPO1147 IPR004606 Molybdenum-pterin binding YPO1147 IPR005116 Transport-associated OB, type 1 YPO1147 IPR008995 Molybdate/tungstate binding, C-terminal YPO1147 IPR011868 Molybdate ABC transporter, ATP-binding protein YPO1147 IPR017871 ABC transporter, conserved site YPO1147 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1148 IPR000150 Cof protein YPO1148 IPR006379 HAD-superfamily hydrolase, subfamily IIB YPO1148 IPR023214 HAD-like domain YPO1149 IPR011045 Nitrous oxide reductase, N-terminal YPO1149 IPR015943 WD40/YVTN repeat-like-containing domain YPO1149 IPR019405 Lactonase, 7-bladed beta propeller YPO1149 IPR022528 6-phosphogluconolactonase, YbhE-type YPO1150 IPR005814 Aminotransferase class-III YPO1150 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA YPO1150 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPO1150 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPO1150 IPR015424 Pyridoxal phosphate-dependent transferase YPO1151 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB YPO1151 IPR006638 Elongator protein 3/MiaB/NifB YPO1151 IPR007197 Radical SAM YPO1151 IPR010722 Biotin and thiamin synthesis-associated domain YPO1151 IPR013785 Aldolase-type TIM barrel YPO1151 IPR024177 Biotin synthase YPO1152 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site YPO1152 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type YPO1152 IPR004839 Aminotransferase, class I/classII YPO1152 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPO1152 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPO1152 IPR015424 Pyridoxal phosphate-dependent transferase YPO1152 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria YPO1153 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC YPO1153 IPR013216 Methyltransferase type 11 YPO1153 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPO1154 IPR004472 Dethiobiotin synthase BioD YPO1154 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1155 IPR003439 ABC transporter-like YPO1155 IPR003593 AAA+ ATPase domain YPO1155 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1156 IPR001650 Helicase, C-terminal YPO1156 IPR001943 UVR domain YPO1156 IPR004807 UvrABC system, subunit B YPO1156 IPR006935 Helicase/UvrB domain YPO1156 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YPO1156 IPR024759 UvrB, YAD/RRR-motif-containing domain YPO1156 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1157 IPR003034 SAP domain YPO1157 IPR018668 Protein of unknown function DUF2132 YPO1158 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 YPO1158 IPR010119 Gluconeogenesis factor YPO1159 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site YPO1159 IPR006638 Elongator protein 3/MiaB/NifB YPO1159 IPR007197 Radical SAM YPO1159 IPR010505 Molybdenum cofactor synthesis C-terminal YPO1159 IPR013483 Molybdenum cofactor biosynthesis protein A YPO1159 IPR013785 Aldolase-type TIM barrel YPO1160 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain YPO1160 IPR023045 Molybdenum cofactor biosynthesis C YPO1160 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type YPO1161 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 YPO1161 IPR010034 Molybdopterin converting factor, subunit 1 YPO1161 IPR012675 Beta-grasp domain YPO1161 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp YPO1162 IPR003448 Molybdopterin biosynthesis MoaE YPO1163 IPR006214 Bax inhibitor 1-related YPO1164 IPR002686 Transposase IS200-like YPO1165 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal YPO1165 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal YPO1165 IPR011533 Oxygen-dependent choline dehydrogenase YPO1165 IPR012132 Glucose-methanol-choline oxidoreductase YPO1165 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPO1166 IPR011264 NAD/NADP-dependent betaine aldehyde dehydrogenase YPO1166 IPR015590 Aldehyde dehydrogenase domain YPO1166 IPR016160 Aldehyde dehydrogenase, cysteine active site YPO1166 IPR016161 Aldehyde/histidinol dehydrogenase YPO1166 IPR016162 Aldehyde dehydrogenase, N-terminal YPO1166 IPR016163 Aldehyde dehydrogenase, C-terminal YPO1166 IPR029510 Aldehyde dehydrogenase, glutamic acid active site YPO1167 IPR001647 DNA-binding HTH domain, TetR-type YPO1167 IPR009057 Homeodomain-like YPO1167 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal YPO1167 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal YPO1167 IPR017757 Transcriptional repressor BetI YPO1167 IPR023772 DNA-binding HTH domain, TetR-type, conserved site YPO1168 IPR000060 BCCT transporter family YPO1168 IPR018093 BCCT transporter, conserved site YPO1169 IPR000847 Transcription regulator HTH, LysR YPO1169 IPR005119 LysR, substrate-binding YPO1169 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1170 IPR000620 Drug/metabolite transporter YPO1171 IPR000845 Nucleoside phosphorylase domain YPO1171 IPR001369 PNP/MTAP phosphorylase YPO1171 IPR010943 Xanthosine phosphorylase YPO1171 IPR011268 Purine nucleoside phosphorylase YPO1171 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific YPO1172 IPR020846 Major facilitator superfamily domain YPO1173 IPR002686 Transposase IS200-like YPO1174 IPR025164 Domain of unknown function DUF4097 YPO1175 IPR001269 tRNA-dihydrouridine synthase YPO1175 IPR013785 Aldolase-type TIM barrel YPO1175 IPR018517 tRNA-dihydrouridine synthase, conserved site YPO1175 IPR032886 YPO1175 YPO1176 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal YPO1176 IPR012338 Beta-lactamase/transpeptidase-like YPO1176 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A YPO1177 IPR006094 FAD linked oxidase, N-terminal YPO1177 IPR012256 D-lactate dehydrogenase YPO1177 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal YPO1177 IPR016164 FAD-linked oxidase-like, C-terminal YPO1177 IPR016166 FAD-binding, type 2 YPO1177 IPR016167 FAD-binding, type 2, subdomain 1 YPO1177 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 YPO1177 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 YPO1177 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 YPO1178 IPR008173 Adenylyl cyclase CyaB YPO1178 IPR023577 CYTH-like domain YPO1178 IPR033469 YPO1178 YPO1179 IPR002711 HNH endonuclease YPO1179 IPR003615 HNH nuclease YPO1180 IPR020941 Suppressor of fused-like domain YPO1181 IPR007341 Transglycosylase-associated protein YPO1182 IPR003439 ABC transporter-like YPO1182 IPR003593 AAA+ ATPase domain YPO1182 IPR012693 ABC transporter, phosphonate import, PhnC YPO1182 IPR017871 ABC transporter, conserved site YPO1182 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1183 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic protein YPO1183 IPR017797 Phosphonate ABC transporter, periplasmic substrate-binding protein YPO1184 IPR000515 MetI-like domain YPO1184 IPR005769 ABC transporter, permease PhnE/PtxC YPO1185 IPR000515 MetI-like domain YPO1185 IPR005769 ABC transporter, permease PhnE/PtxC YPO1186 IPR009921 Domain of unknown function DUF1456 YPO1187 IPR000709 Leu/Ile/Val-binding protein YPO1187 IPR017777 ABC transporter, urea, substrate-binding, UrtA YPO1187 IPR028082 Periplasmic binding protein-like I YPO1188 IPR001851 ABC transporter, permease YPO1188 IPR011989 Armadillo-like helical YPO1188 IPR016024 Armadillo-type fold YPO1188 IPR017779 ABC transporter, urea, permease protein, UrtB YPO1189 IPR001851 ABC transporter, permease YPO1189 IPR017778 ABC transporter, urea, permease protein, UrtC YPO1190 IPR003439 ABC transporter-like YPO1190 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD YPO1190 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1190 IPR032823 YPO1190 YPO1191 IPR003439 ABC transporter-like YPO1191 IPR003593 AAA+ ATPase domain YPO1191 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE YPO1191 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1192 IPR005123 Oxoglutarate/iron-dependent dioxygenase YPO1192 IPR016946 Uncharacterised conserved protein UCP030125 YPO1193 IPR002129 Pyridoxal phosphate-dependent decarboxylase YPO1193 IPR010977 Aromatic-L-amino-acid decarboxylase YPO1193 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPO1193 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPO1193 IPR015424 Pyridoxal phosphate-dependent transferase YPO1194 IPR001307 Thiosulphate sulfurtransferase, conserved site YPO1194 IPR001763 Rhodanese-like domain YPO1197 IPR000515 MetI-like domain YPO1197 IPR001991 Sodium:dicarboxylate symporter YPO1198 IPR003439 ABC transporter-like YPO1198 IPR003593 AAA+ ATPase domain YPO1198 IPR017871 ABC transporter, conserved site YPO1198 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1199 IPR000515 MetI-like domain YPO1200 IPR002293 Amino acid/polyamine transporter I YPO1201 IPR000310 Orn/Lys/Arg decarboxylase, major domain YPO1201 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal YPO1201 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal YPO1201 IPR011193 Ornithine/lysine/arginine decarboxylase YPO1201 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPO1201 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPO1201 IPR015424 Pyridoxal phosphate-dependent transferase YPO1203 IPR000620 Drug/metabolite transporter YPO1205 IPR001702 Porin, Gram-negative type YPO1205 IPR001897 Porin, gammaproteobacterial YPO1205 IPR013793 Porin, Gram-negative type, conserved site YPO1205 IPR023614 Porin domain YPO1206 IPR006554 Helicase-like, DEXD box c2 type YPO1206 IPR006555 ATP-dependent helicase, C-terminal YPO1206 IPR010614 DEAD2 YPO1206 IPR011545 DEAD/DEAH box helicase domain YPO1206 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YPO1206 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1207 IPR010582 Catalase immune-responsive domain YPO1207 IPR011614 Catalase core domain YPO1207 IPR018028 Catalase, mono-functional, haem-containing YPO1207 IPR020835 Catalase-like domain YPO1207 IPR024708 Catalase active site YPO1207 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 YPO1208 IPR009998 YfaZ YPO1208 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel YPO1208 IPR023614 Porin domain YPO1209 IPR002091 Aromatic amino acid permease YPO1209 IPR013059 Tryptophan/tyrosine transporter YPO1209 IPR013061 Tryptophan/tryrosine permease, conserved site YPO1209 IPR018227 Tryptophan/tyrosine permease YPO1210 IPR001453 Molybdopterin binding domain YPO1210 IPR008135 Competence-induced protein CinA YPO1211 IPR005658 Proteinase inhibitor I11, ecotin YPO1211 IPR023084 Proteinase inhibitor I11, ecotin, gammaproteobacteria YPO1211 IPR023189 Proteinase inhibitor I11, ecotin domain YPO1211 IPR027438 Ecotin, C-terminal YPO1212 IPR001041 2Fe-2S ferredoxin-type domain YPO1212 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site YPO1212 IPR012675 Beta-grasp domain YPO1213 IPR000358 Ribonucleotide reductase small subunit YPO1213 IPR009078 Ferritin-like superfamily YPO1213 IPR012348 Ribonucleotide reductase-related YPO1213 IPR030475 YPO1213 YPO1214 IPR000788 Ribonucleotide reductase large subunit, C-terminal YPO1214 IPR005144 ATP-cone YPO1214 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal YPO1214 IPR013346 Ribonucleotide reductase, class I , alpha subunit YPO1214 IPR013509 Ribonucleotide reductase large subunit, N-terminal YPO1215 IPR010233 Ubiquinone biosynthesis O-methyltransferase YPO1215 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPO1216 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal YPO1216 IPR005743 DNA gyrase, subunit A YPO1216 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel YPO1216 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain YPO1216 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta YPO1216 IPR013760 DNA topoisomerase, type IIA-like domain YPO1216 IPR024946 Arginine repressor C-terminal-like domain YPO1217 IPR001789 Signal transduction response regulator, receiver domain YPO1217 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO1217 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPO1217 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPO1217 IPR011006 CheY-like superfamily YPO1217 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal YPO1217 IPR030856 YPO1217 YPO1218 IPR000792 Transcription regulator LuxR, C-terminal YPO1218 IPR001789 Signal transduction response regulator, receiver domain YPO1218 IPR011006 CheY-like superfamily YPO1218 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1218 IPR016032 Signal transduction response regulator, C-terminal effector YPO1218 IPR030864 YPO1218 YPO1221 IPR011701 Major facilitator superfamily YPO1221 IPR020846 Major facilitator superfamily domain YPO1223 IPR002686 Transposase IS200-like YPO1224 IPR001466 Beta-lactamase-related YPO1224 IPR012338 Beta-lactamase/transpeptidase-like YPO1226 IPR020846 Major facilitator superfamily domain YPO1228 IPR001279 Beta-lactamase-like YPO1228 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D YPO1229 IPR003660 HAMP linker domain YPO1229 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YPO1229 IPR029151 Periplasmic sensor domain-like YPO1229 IPR033479 YPO1229 YPO1231 IPR000036 Peptidase A26, omptin YPO1231 IPR020080 Outer membrane adhesin/peptidase omptin YPO1231 IPR023619 Peptidase A26 YPO1232 IPR010391 DNA damage-inducible protein DinI-like YPO1233 IPR001387 Cro/C1-type helix-turn-helix domain YPO1233 IPR010982 Lambda repressor-like, DNA-binding domain YPO1233 IPR015927 Peptidase S24/S26A/S26B/S26C YPO1233 IPR019759 Peptidase S24/S26A/S26B YPO1233 IPR028360 Peptidase S24/S26, beta-ribbon domain YPO1234 IPR010534 Bacteriophage 933W, GpQ YPO1235 IPR010737 Protein of unknown function, DUF1537 YPO1235 IPR031475 YPO1235 YPO1236 IPR001303 Class II aldolase/adducin N-terminal YPO1237 IPR001034 HTH DeoR N-terminal domain YPO1237 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1237 IPR014036 DeoR C-terminal sensor domain YPO1237 IPR018356 Transcription regulator, HTH DeoR-type, conserved site YPO1238 IPR013022 Xylose isomerase-like, TIM barrel domain YPO1238 IPR026040 Hydroxypyruvate isomerase-like YPO1241 IPR024400 Protein of unknown function DUF2635 YPO1242 IPR007067 Tail sheath protein YPO1243 IPR019596 Bacteriophage Mu, GpM, tail tube YPO1244 IPR019289 Bacteriophage tail protein Gp41, putative YPO1246 IPR009826 DNA circulation, N-terminal YPO1247 IPR026276 Baseplate protein GpP YPO1248 IPR014462 Bacteriophage Mu, Gp45 YPO1249 IPR010877 Bacteriophage Mu, Gp46 YPO1250 IPR006949 Baseplate assembly protein J-like, predicted YPO1250a IPR018755 Bacteriophage Mu, Gp48 YPO1251 IPR018755 Bacteriophage Mu, Gp48 YPO1252 IPR011083 Phage tail collar domain YPO1253 IPR000281 Helix-turn-helix protein RpiR YPO1253 IPR001347 Sugar isomerase (SIS) YPO1253 IPR009057 Homeodomain-like YPO1253 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1254 IPR001360 Glycoside hydrolase, family 1 YPO1254 IPR013781 Glycoside hydrolase, catalytic domain YPO1254 IPR017853 Glycoside hydrolase, superfamily YPO1254 IPR018120 Glycoside hydrolase, family 1, active site YPO1254 IPR033132 YPO1254 YPO1258 IPR024622 Colicin/pyocin, DNase domain YPO1260 IPR000917 Sulfatase YPO1260 IPR012159 Membrane sulfatase, HI0842-related YPO1260 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha YPO1260 IPR017850 Alkaline-phosphatase-like, core domain YPO1260 IPR024588 Membrane sulfatase, HI0842-related, N-terminal domain YPO1261 IPR009857 Uncharacterised protein family UPF0352 YPO1261 IPR023202 YejL-like domain YPO1262 IPR007358 Nucleoid-associated protein NdpA YPO1263 IPR002686 Transposase IS200-like YPO1264 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain YPO1264 IPR020055 Ribosomal protein L25, short-form YPO1264 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain YPO1264 IPR029751 Ribosomal protein L25 YPO1265 IPR001650 Helicase, C-terminal YPO1265 IPR006935 Helicase/UvrB domain YPO1265 IPR011332 Zinc-binding ribosomal protein YPO1265 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YPO1265 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1266 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F YPO1266 IPR002942 RNA-binding S4 domain YPO1266 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F YPO1266 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site YPO1266 IPR020103 Pseudouridine synthase, catalytic domain YPO1267 IPR004812 Drug resistance transporter Bcr/CmlA subfamily YPO1267 IPR011701 Major facilitator superfamily YPO1267 IPR020846 Major facilitator superfamily domain YPO1269 IPR020489 Uncharacterised protein family YejG YPO1270 IPR003439 ABC transporter-like YPO1270 IPR003593 AAA+ ATPase domain YPO1270 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YPO1270 IPR017871 ABC transporter, conserved site YPO1270 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1271 IPR000515 MetI-like domain YPO1271 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YPO1272 IPR000515 MetI-like domain YPO1273 IPR000914 Bacterial extracellular solute-binding protein, family 5 YPO1273 IPR030678 YPO1273 YPO1275 IPR000064 Endopeptidase, NLPC/P60 domain YPO1276 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPO1276 IPR032908 YPO1276 YPO1277 IPR003495 CobW/HypB/UreG domain YPO1277 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal YPO1277 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1279 IPR000524 Transcription regulator HTH, GntR YPO1279 IPR008920 Transcription regulator FadR/GntR, C-terminal YPO1279 IPR011711 GntR, C-terminal YPO1279 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1280 IPR000669 Mannitol dehydrogenase YPO1280 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YPO1280 IPR013118 Mannitol dehydrogenase, C-terminal YPO1280 IPR013131 Mannitol dehydrogenase, N-terminal YPO1280 IPR013328 Dehydrogenase, multihelical YPO1280 IPR016040 NAD(P)-binding domain YPO1280 IPR023027 Mannitol dehydrogenase, conserved site YPO1283 IPR004628 Mannonate dehydratase YPO1283 IPR013022 Xylose isomerase-like, TIM barrel domain YPO1284 IPR001059 Translation elongation factor P/YeiP, central YPO1284 IPR008991 Translation protein SH3-like domain YPO1284 IPR011897 Translation elongation factor P-like, YeiP YPO1284 IPR012340 Nucleic acid-binding, OB-fold YPO1284 IPR013185 Translation elongation factor, KOW-like YPO1284 IPR013852 Translation elongation factor P/YeiP, conserved site YPO1284 IPR014722 Ribosomal protein L2 domain 2 YPO1284 IPR015365 Elongation factor P, C-terminal YPO1284 IPR020599 Translation elongation factor P/YeiP YPO1285 IPR002091 Aromatic amino acid permease YPO1285 IPR013059 Tryptophan/tyrosine transporter YPO1285 IPR018227 Tryptophan/tyrosine permease YPO1286 IPR005358 Putative zinc- or iron-chelating domain containing protein YPO1287 IPR002347 Glucose/ribitol dehydrogenase YPO1287 IPR016040 NAD(P)-binding domain YPO1287 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPO1288 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPO1288 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain YPO1288 IPR016040 NAD(P)-binding domain YPO1288 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YPO1289 IPR011234 Fumarylacetoacetase, C-terminal-related YPO1290 IPR015590 Aldehyde dehydrogenase domain YPO1290 IPR016160 Aldehyde dehydrogenase, cysteine active site YPO1290 IPR016161 Aldehyde/histidinol dehydrogenase YPO1290 IPR016162 Aldehyde dehydrogenase, N-terminal YPO1290 IPR016163 Aldehyde dehydrogenase, C-terminal YPO1291 IPR000577 YPO1291 YPO1291 IPR006000 Xylulokinase YPO1291 IPR018483 Carbohydrate kinase, FGGY, conserved site YPO1291 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPO1291 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPO1292 IPR004788 Ribose 5-phosphate isomerase, type A YPO1292 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup YPO1293 IPR025997 Periplasmic binding protein domain YPO1293 IPR028082 Periplasmic binding protein-like I YPO1294 IPR003439 ABC transporter-like YPO1294 IPR003593 AAA+ ATPase domain YPO1294 IPR017871 ABC transporter, conserved site YPO1294 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1295 IPR001851 ABC transporter, permease YPO1296 IPR000086 NUDIX hydrolase domain YPO1296 IPR015797 NUDIX hydrolase domain-like YPO1296 IPR020084 NUDIX hydrolase, conserved site YPO1296 IPR020476 NUDIX hydrolase YPO1298 IPR000032 Phosphocarrier HPr protein-like YPO1298 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site YPO1298 IPR002114 Phosphotransferase system, HPr serine phosphorylation site YPO1298 IPR002178 PTS EIIA type-2 domain YPO1298 IPR016152 Phosphotransferase/anion transporter YPO1299 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YPO1299 IPR011611 Carbohydrate kinase PfkB YPO1299 IPR017583 Tagatose/fructose phosphokinase YPO1299 IPR022463 Fructose 1-phosphate kinase YPO1299 IPR029056 Ribokinase-like YPO1300 IPR003352 Phosphotransferase system, EIIC YPO1300 IPR003353 Phosphotransferase system, fructose-specific IIB subunit YPO1300 IPR003501 Phosphotransferase system, EIIB component, type 2/3 YPO1300 IPR006327 Phosphotransferase system, fructose IIC component YPO1301 IPR001867 Signal transduction response regulator, C-terminal YPO1301 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1301 IPR016032 Signal transduction response regulator, C-terminal effector YPO1304 IPR001829 Pili assembly chaperone, bacterial YPO1304 IPR008962 PapD-like YPO1304 IPR016147 PapD, N-terminal, bacterial YPO1304 IPR016148 Pili assembly chaperone, C-terminal domain YPO1304 IPR018046 Pili assembly chaperone, conserved site YPO1305 IPR000015 Outer membrane usher protein YPO1305 IPR018030 Fimbrial membrane usher, conserved site YPO1305 IPR025885 PapC, N-terminal domain YPO1305 IPR025949 PapC-like, C-terminal domain YPO1306 IPR001719 AP endonuclease 2 YPO1306 IPR013022 Xylose isomerase-like, TIM barrel domain YPO1306 IPR018246 AP endonuclease 2, zinc binding site YPO1307 IPR004630 Uncharacterised protein family UPF0324, bacteria YPO1307 IPR018383 Uncharacterised protein family UPF0324, prokaryote YPO1308 IPR000847 Transcription regulator HTH, LysR YPO1308 IPR005119 LysR, substrate-binding YPO1308 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1309 IPR002293 Amino acid/polyamine transporter I YPO1309 IPR004840 Amino acid permease, conserved site YPO1309 IPR004841 Amino acid permease/ SLC12A domain YPO1310 IPR002491 ABC transporter periplasmic binding domain YPO1311 IPR000522 ABC transporter, permease protein YPO1311 IPR029022 ABC transporter, BtuC-like YPO1312 IPR003439 ABC transporter-like YPO1312 IPR003593 AAA+ ATPase domain YPO1312 IPR017871 ABC transporter, conserved site YPO1312 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1313 IPR000531 TonB-dependent receptor, beta-barrel YPO1313 IPR010916 TonB box, conserved site YPO1313 IPR012910 TonB-dependent receptor, plug YPO1314 IPR004045 Glutathione S-transferase, N-terminal YPO1314 IPR004046 Glutathione S-transferase, C-terminal YPO1314 IPR010987 Glutathione S-transferase, C-terminal-like YPO1314 IPR012336 Thioredoxin-like fold YPO1315 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like YPO1315 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial YPO1315 IPR023214 HAD-like domain YPO1316 IPR002283 Isopenicillin N synthase YPO1316 IPR005123 Oxoglutarate/iron-dependent dioxygenase YPO1316 IPR026992 Non-haem dioxygenase N-terminal domain YPO1316 IPR027443 Isopenicillin N synthase-like YPO1317 IPR004872 Lipoprotein NlpA family YPO1318 IPR003439 ABC transporter-like YPO1318 IPR003593 AAA+ ATPase domain YPO1318 IPR017871 ABC transporter, conserved site YPO1318 IPR018449 NIL domain YPO1318 IPR026253 Methionine import ATP-binding protein MetN YPO1318 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1319 IPR000515 MetI-like domain YPO1320 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal YPO1320 IPR012338 Beta-lactamase/transpeptidase-like YPO1320 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal YPO1320 IPR015956 Penicillin-binding protein-associated YPO1320 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A YPO1321 IPR004694 Hydroxy amino acid transporter YPO1321 IPR018227 Tryptophan/tyrosine permease YPO1322 IPR001034 HTH DeoR N-terminal domain YPO1322 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1322 IPR014036 DeoR C-terminal sensor domain YPO1322 IPR018356 Transcription regulator, HTH DeoR-type, conserved site YPO1323 IPR002915 DeoC/FbaB/ lacD aldolase YPO1323 IPR011343 Deoxyribose-phosphate aldolase YPO1323 IPR013785 Aldolase-type TIM barrel YPO1323 IPR028581 Deoxyribose-phosphate aldolase type I YPO1324 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPO1325 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPO1326 IPR006037 Regulator of K+ conductance, C-terminal YPO1326 IPR006512 YidE/YbjL duplication YPO1326 IPR023017 Transport protein YbjL, putative YPO1327 IPR002109 Glutaredoxin YPO1327 IPR011767 Glutaredoxin active site YPO1327 IPR011902 Glutaredoxin, GrxA YPO1327 IPR012336 Thioredoxin-like fold YPO1327 IPR014025 Glutaredoxin subgroup YPO1328 IPR010815 Protein of unknown function DUF1418 YPO1330 IPR019660 Putative sensory transduction regulator YbjN YPO1331 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein YPO1332 IPR003439 ABC transporter-like YPO1332 IPR003593 AAA+ ATPase domain YPO1332 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit YPO1332 IPR008995 Molybdate/tungstate binding, C-terminal YPO1332 IPR013611 Transport-associated OB, type 2 YPO1332 IPR017871 ABC transporter, conserved site YPO1332 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1333 IPR000515 MetI-like domain YPO1334 IPR000515 MetI-like domain YPO1335 IPR019703 Protein of unknown function DUF2593 YPO1336 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD YPO1336 IPR010280 (Uracil-5)-methyltransferase family YPO1336 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC YPO1336 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPO1336 IPR030390 YPO1336 YPO1336 IPR030391 YPO1336 YPO1338 IPR001584 Integrase, catalytic core YPO1338 IPR006120 Resolvase, HTH domain YPO1338 IPR009057 Homeodomain-like YPO1338 IPR012337 Ribonuclease H-like domain YPO1339 IPR001270 ClpA/B family YPO1339 IPR002611 IstB-like ATP-binding protein YPO1339 IPR003593 AAA+ ATPase domain YPO1339 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1339 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO1342 IPR001107 Band 7 protein YPO1342 IPR001972 Stomatin family YPO1343 IPR002491 ABC transporter periplasmic binding domain YPO1345 IPR003439 ABC transporter-like YPO1345 IPR003593 AAA+ ATPase domain YPO1345 IPR017871 ABC transporter, conserved site YPO1345 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1346 IPR004298 Nicotianamine synthase YPO1346 IPR016040 NAD(P)-binding domain YPO1347 IPR016040 NAD(P)-binding domain YPO1347 IPR016935 Protein of unknown function DUF2338 YPO1348 IPR000620 Drug/metabolite transporter YPO1349 IPR000515 MetI-like domain YPO1349 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family YPO1350 IPR000515 MetI-like domain YPO1350 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family YPO1351 IPR001320 Ionotropic glutamate receptor YPO1351 IPR001638 Extracellular solute-binding protein, family 3 YPO1351 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein YPO1351 IPR018313 Extracellular solute-binding protein, family 3, conserved site YPO1352 IPR003439 ABC transporter-like YPO1352 IPR003593 AAA+ ATPase domain YPO1352 IPR017871 ABC transporter, conserved site YPO1352 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1352 IPR030679 YPO1352 YPO1353 IPR002701 Chorismate mutase YPO1353 IPR008240 Chorismate mutase, periplasmic YPO1353 IPR020822 Chorismate mutase, type II YPO1354 IPR024289 Domain of unknown function DUF3828 YPO1355 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain YPO1355 IPR016040 NAD(P)-binding domain YPO1356 IPR016040 NAD(P)-binding domain YPO1356 IPR021295 Protein of unknown function DUF2867 YPO1357 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase YPO1357 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPO1357 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPO1357 IPR015424 Pyridoxal phosphate-dependent transferase YPO1357 IPR023603 Threonine aldolase YPO1358 IPR000399 TPP-binding enzyme, conserved site YPO1358 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YPO1358 IPR012000 Thiamine pyrophosphate enzyme, central domain YPO1358 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain YPO1358 IPR029035 DHS-like NAD/FAD-binding domain YPO1358 IPR029061 Thiamin diphosphate-binding fold YPO1359 IPR001041 2Fe-2S ferredoxin-type domain YPO1359 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPO1359 IPR001834 NADH:cytochrome b5 reductase (CBR) YPO1359 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site YPO1359 IPR008333 Oxidoreductase, FAD-binding domain YPO1359 IPR012675 Beta-grasp domain YPO1359 IPR017938 Riboflavin synthase-like beta-barrel YPO1360 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase YPO1360 IPR010048 Hydroxylamine reductase YPO1360 IPR011254 Prismane-like YPO1360 IPR016099 Prismane-like, alpha/beta-sandwich YPO1360 IPR016100 Prismane, alpha-bundle YPO1361 IPR005642 Protein of unknown function DUF340, prokaryotic membrane YPO1362 IPR022602 Protein of unknown function DUF2813 YPO1362 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1363 IPR007488 Protein of unknown function DUF535 YPO1364 IPR006143 RND efflux pump, membrane fusion protein YPO1364 IPR030190 YPO1364 YPO1364 IPR032317 YPO1364 YPO1365 IPR003439 ABC transporter-like YPO1365 IPR003593 AAA+ ATPase domain YPO1365 IPR003838 Permease FtsX-like YPO1365 IPR017871 ABC transporter, conserved site YPO1365 IPR025857 MacB-like periplasmic core domain YPO1365 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1366 IPR002059 Cold-shock protein, DNA-binding YPO1366 IPR011129 Cold shock protein YPO1366 IPR012340 Nucleic acid-binding, OB-fold YPO1366 IPR012751 CspD, cold shock YPO1366 IPR019844 Cold-shock conserved site YPO1367 IPR003769 Adaptor protein ClpS, core YPO1367 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like YPO1367 IPR022935 ATP-dependent Clp protease adaptor protein ClpS YPO1368 IPR001270 ClpA/B family YPO1368 IPR003593 AAA+ ATPase domain YPO1368 IPR003959 ATPase, AAA-type, core YPO1368 IPR004176 Clp, N-terminal YPO1368 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA YPO1368 IPR018368 ClpA/B, conserved site 1 YPO1368 IPR019489 Clp ATPase, C-terminal YPO1368 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1368 IPR028299 ClpA/B, conserved site 2 YPO1369 IPR002686 Transposase IS200-like YPO1370 IPR004368 Translation initiation factor IF-1 YPO1370 IPR006196 RNA-binding domain, S1, IF1 type YPO1370 IPR012340 Nucleic acid-binding, OB-fold YPO1370 IPR022967 RNA-binding domain, S1 YPO1371 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase YPO1371 IPR016181 Acyl-CoA N-acyltransferase YPO1372 IPR003439 ABC transporter-like YPO1372 IPR003593 AAA+ ATPase domain YPO1372 IPR011527 ABC transporter type 1, transmembrane domain YPO1372 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC YPO1372 IPR017871 ABC transporter, conserved site YPO1372 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1373 IPR003439 ABC transporter-like YPO1373 IPR003593 AAA+ ATPase domain YPO1373 IPR011527 ABC transporter type 1, transmembrane domain YPO1373 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD YPO1373 IPR017871 ABC transporter, conserved site YPO1373 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1374 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II YPO1374 IPR005982 Thioredoxin reductase YPO1374 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site YPO1374 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPO1375 IPR000485 AsnC-type HTH domain YPO1375 IPR011008 Dimeric alpha-beta barrel YPO1375 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1375 IPR019885 Transcription regulator HTH, AsnC-type, conserved site YPO1375 IPR019887 Transcription regulator AsnC-type, C-terminal YPO1375 IPR019888 Transcription regulator AsnC-type YPO1376 IPR002543 FtsK domain YPO1376 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1376 IPR018541 FtsK gamma domain YPO1376 IPR025199 Domain of unknown function DUF4117 YPO1376 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1377 IPR004564 Outer membrane lipoprotein carrier protein LolA-like YPO1377 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria YPO1377 IPR029046 Lipoprotein localisation LolA/LolB/LppX YPO1378 IPR003593 AAA+ ATPase domain YPO1378 IPR003959 ATPase, AAA-type, core YPO1378 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal YPO1378 IPR021886 MgsA AAA+ ATPase C-terminal YPO1378 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1378 IPR032423 YPO1378 YPO1379 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain YPO1379 IPR002317 Serine-tRNA ligase, type1 YPO1379 IPR010978 tRNA-binding arm YPO1379 IPR015866 Serine-tRNA synthetase, type1, N-terminal YPO1380 IPR011701 Major facilitator superfamily YPO1380 IPR020846 Major facilitator superfamily domain YPO1380 IPR023745 MSF-type transporter, YcaD YPO1381 IPR001989 Radical-activating enzyme, conserved site YPO1381 IPR007197 Radical SAM YPO1381 IPR012838 Pyruvate formate-lyase activating enzyme YPO1382 IPR002654 Glycosyl transferase, family 25 YPO1383 IPR001150 Glycine radical domain YPO1383 IPR004184 Pyruvate formate lyase domain YPO1383 IPR005949 Formate acetyltransferase YPO1383 IPR019777 Formate C-acetyltransferase glycine radical, conserved site YPO1384 IPR000292 Formate/nitrite transporter YPO1384 IPR023271 Aquaporin-like YPO1384 IPR023999 Formate transporter FocA, putative YPO1384 IPR024002 Formate/nitrite transporter, conserved site YPO1385 IPR003776 YcaO-like domain YPO1386 IPR004550 L-asparaginase, type II YPO1386 IPR006034 Asparaginase/glutaminase YPO1386 IPR020827 Asparaginase/glutaminase, active site 1 YPO1386 IPR027473 L-asparaginase, C-terminal domain YPO1386 IPR027474 L-asparaginase, N-terminal YPO1386 IPR027475 Asparaginase/glutaminase, active site 2 YPO1387 IPR005594 YadA-like, C-terminal YPO1387 IPR008126 Outer membrane adhesion, Yersinia YPO1387 IPR008635 Coiled stalk of trimeric autotransporter adhesin YPO1387 IPR011049 Serralysin-like metalloprotease, C-terminal YPO1388 IPR005594 YadA-like, C-terminal YPO1389 IPR000192 Aminotransferase class V domain YPO1389 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPO1389 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPO1389 IPR015424 Pyridoxal phosphate-dependent transferase YPO1389 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site YPO1389 IPR022278 Phosphoserine aminotransferase YPO1390 IPR001986 Enolpyruvate transferase domain YPO1390 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase YPO1390 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta YPO1390 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site YPO1391 IPR003136 Cytidylate kinase YPO1391 IPR011994 Cytidylate kinase domain YPO1391 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1392 IPR000110 Ribosomal protein S1 YPO1392 IPR003029 Ribosomal protein S1, RNA-binding domain YPO1392 IPR012340 Nucleic acid-binding, OB-fold YPO1392 IPR022967 RNA-binding domain, S1 YPO1393 IPR000119 Histone-like bacterial DNA-binding protein YPO1393 IPR005685 Integration host factor, beta subunit YPO1393 IPR010992 Integration host factor (IHF)-like DNA-binding domain YPO1393 IPR020816 Histone-like DNA-binding protein, conserved site YPO1394 IPR001279 Beta-lactamase-like YPO1394 IPR004477 ComEC/Rec2-related protein YPO1394 IPR004797 Competence protein ComEC/Rec2 YPO1394 IPR025405 Domain of unknown function DUF4131 YPO1395 IPR003439 ABC transporter-like YPO1395 IPR003593 AAA+ ATPase domain YPO1395 IPR011527 ABC transporter type 1, transmembrane domain YPO1395 IPR011917 ABC transporter, lipid A export, MsbA YPO1395 IPR017871 ABC transporter, conserved site YPO1395 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1396 IPR003758 Tetraacyldisaccharide 4'-kinase YPO1396 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1397 IPR009770 Domain of unknown function DUF1338 YPO1398 IPR002059 Cold-shock protein, DNA-binding YPO1398 IPR011129 Cold shock protein YPO1398 IPR012156 Cold shock, CspA YPO1398 IPR012340 Nucleic acid-binding, OB-fold YPO1399 IPR005651 Uncharacterised protein family UPF0434/Trm112 YPO1400 IPR003329 Acylneuraminate cytidylyltransferase YPO1400 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase YPO1400 IPR029044 Nucleotide-diphospho-sugar transferases YPO1401 IPR011009 Protein kinase-like domain YPO1401 IPR016477 Fructosamine/Ketosamine-3-kinase YPO1402 IPR025714 Methyltransferase domain YPO1402 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPO1403 IPR005582 Chromosome partition protein MukF YPO1403 IPR010916 TonB box, conserved site YPO1403 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1403 IPR033439 YPO1403 YPO1403 IPR033440 YPO1403 YPO1403 IPR033441 YPO1403 YPO1404 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE YPO1405 IPR007406 MukB, N-terminal domain YPO1405 IPR009053 Prefoldin YPO1405 IPR012090 Chromosome partition protein MukB YPO1405 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1405 IPR032520 YPO1405 YPO1406 IPR002686 Transposase IS200-like YPO1407 IPR002477 Peptidoglycan binding-like YPO1407 IPR005490 L,D-transpeptidase catalytic domain YPO1408 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain YPO1408 IPR010275 Protein of unknown function DUF882 YPO1409 IPR001279 Beta-lactamase-like YPO1410 IPR000796 Aspartate/other aminotransferase YPO1410 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site YPO1410 IPR004839 Aminotransferase, class I/classII YPO1410 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPO1410 IPR015424 Pyridoxal phosphate-dependent transferase YPO1411 IPR001702 Porin, Gram-negative type YPO1411 IPR001897 Porin, gammaproteobacterial YPO1411 IPR013793 Porin, Gram-negative type, conserved site YPO1411 IPR023614 Porin domain YPO1412 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb YPO1412 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) YPO1412 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type YPO1412 IPR004522 Asparagine-tRNA ligase YPO1412 IPR012340 Nucleic acid-binding, OB-fold YPO1412 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like YPO1413 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal YPO1413 IPR006406 Nicotinate phosphoribosyltransferase YPO1413 IPR007229 Nicotinate phosphoribosyltransferase family YPO1414 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase YPO1414 IPR012779 Peptidase M1, alanyl aminopeptidase YPO1414 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal YPO1414 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal YPO1415 IPR001295 Dihydroorotate dehydrogenase, conserved site YPO1415 IPR005719 Dihydroorotate dehydrogenase, class 2 YPO1415 IPR005720 Dihydroorotate dehydrogenase domain YPO1415 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 YPO1415 IPR013785 Aldolase-type TIM barrel YPO1416 IPR009809 Cell division protein ZapC YPO1417 IPR001041 2Fe-2S ferredoxin-type domain YPO1417 IPR005302 Molybdenum cofactor sulfurase, C-terminal YPO1417 IPR005303 MOSC, N-terminal beta barrel YPO1417 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site YPO1417 IPR011037 Pyruvate kinase-like, insert domain YPO1417 IPR012675 Beta-grasp domain YPO1418 IPR000241 Putative RNA methylase domain YPO1418 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPO1418 IPR004114 THUMP YPO1418 IPR017244 Ribosomal RNA large subunit methyltransferase K/L YPO1418 IPR019614 S-adenosylmethionine-dependent methyltransferase YPO1418 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPO1419 IPR003439 ABC transporter-like YPO1419 IPR003593 AAA+ ATPase domain YPO1419 IPR017871 ABC transporter, conserved site YPO1419 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1419 IPR032524 YPO1419 YPO1419 IPR032781 YPO1419 YPO1420 IPR005219 Conserved hypothetical protein CHP00155 YPO1420 IPR007498 Paraquat-inducible protein A YPO1421 IPR003399 Mammalian cell entry-related YPO1422 IPR005586 Protein of unknown function DUF330 YPO1423a IPR007040 Ribosome modulation factor YPO1423a IPR023200 Ribosome modulation factor-like domain YPO1424 IPR002686 Transposase IS200-like YPO1425a IPR014030 Beta-ketoacyl synthase, N-terminal YPO1425a IPR014031 Beta-ketoacyl synthase, C-terminal YPO1425a IPR016039 Thiolase-like YPO1425a IPR018201 Beta-ketoacyl synthase, active site YPO1425a IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPO1426 IPR001270 ClpA/B family YPO1426 IPR002611 IstB-like ATP-binding protein YPO1426 IPR003593 AAA+ ATPase domain YPO1426 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1426 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO1427 IPR001584 Integrase, catalytic core YPO1427 IPR006120 Resolvase, HTH domain YPO1427 IPR009057 Homeodomain-like YPO1427 IPR012337 Ribonuclease H-like domain YPO1427b IPR014030 Beta-ketoacyl synthase, N-terminal YPO1427b IPR016039 Thiolase-like YPO1430 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA YPO1430 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ YPO1430 IPR029069 HotDog domain YPO1431 IPR008269 Peptidase S16, Lon C-terminal YPO1431 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPO1431 IPR020568 Ribosomal protein S5 domain 2-type fold YPO1431 IPR027065 Lon protease YPO1433 IPR009390 Macrodomain Ter protein, MatP YPO1434 IPR002686 Transposase IS200-like YPO1435 IPR000498 Outer membrane protein, OmpA-like, transmembrane domain YPO1435 IPR002368 Outer membrane protein, OmpA YPO1435 IPR006664 Outer membrane protein, bacterial YPO1435 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal YPO1435 IPR006690 Outer membrane protein, OmpA-like, conserved site YPO1435 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel YPO1436 IPR004596 Cell division suppressor protein, SulA YPO1436 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1437 IPR007076 TfoX, N-terminal YPO1437 IPR007077 TfoX, C-terminal YPO1437 IPR026256 Transcriptional regulator, TfoX/Sxy-type YPO1438 IPR010019 Integral membrane protein, YccS YPO1438 IPR010020 Integral membrane protein, YccS/YhfK YPO1438 IPR032692 YPO1438 YPO1439 IPR005185 Protein of unknown function DUF307 YPO1439 IPR031308 YPO1439 YPO1440 IPR000212 DNA helicase, UvrD/REP type YPO1440 IPR014016 UvrD-like Helicase, ATP-binding domain YPO1440 IPR014017 DNA helicase, UvrD-like, C-terminal YPO1440 IPR022161 DNA helicase IV, N-terminal domain YPO1440 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1441 IPR004363 Methylglyoxal synthase YPO1441 IPR011607 Methylglyoxal synthase-like domain YPO1441 IPR018148 Methylglyoxal synthase, active site YPO1442 IPR018635 Uncharacterised protein family UPF0319 YPO1443 IPR003781 CoA-binding YPO1443 IPR016040 NAD(P)-binding domain YPO1444 IPR011722 Hemimethylated DNA-binding domain YPO1444 IPR022866 Heat shock protein HspQ YPO1445 IPR002478 PUA domain YPO1445 IPR015947 PUA-like domain YPO1445 IPR019614 S-adenosylmethionine-dependent methyltransferase YPO1445 IPR023542 rRNA large subunit methyltransferase I YPO1445 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPO1446 IPR001792 Acylphosphatase-like domain YPO1446 IPR017968 Acylphosphatase, conserved site YPO1446 IPR020456 Acylphosphatase YPO1446 IPR028627 Acylphosphatase, bacteria YPO1447 IPR007453 Sulphur transfer protein DsrC/TusE YPO1447 IPR025526 DsrC-like domain YPO1450a IPR012337 Ribonuclease H-like domain YPO1450a IPR032874 YPO1450a YPO1451 IPR006093 Oxygen oxidoreductase covalent FAD-binding site YPO1451 IPR006094 FAD linked oxidase, N-terminal YPO1451 IPR016166 FAD-binding, type 2 YPO1451 IPR016167 FAD-binding, type 2, subdomain 1 YPO1451 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 YPO1451 IPR016181 Acyl-CoA N-acyltransferase YPO1452 IPR002347 Glucose/ribitol dehydrogenase YPO1452 IPR016040 NAD(P)-binding domain YPO1452 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPO1454 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ YPO1454 IPR029069 HotDog domain YPO1455 IPR014030 Beta-ketoacyl synthase, N-terminal YPO1455 IPR014031 Beta-ketoacyl synthase, C-terminal YPO1455 IPR016039 Thiolase-like YPO1455 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPO1456 IPR002347 Glucose/ribitol dehydrogenase YPO1456 IPR016040 NAD(P)-binding domain YPO1456 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPO1457 IPR013528 Hydroxymethylglutaryl-coenzyme A synthase, N-terminal YPO1457 IPR013746 Hydroxymethylglutaryl-coenzyme A synthase C-terminal domain YPO1457 IPR016039 Thiolase-like YPO1458 IPR001753 Crotonase superfamily YPO1458 IPR029045 ClpP/crotonase-like domain YPO1459 IPR001753 Crotonase superfamily YPO1459 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site YPO1459 IPR029045 ClpP/crotonase-like domain YPO1460 IPR002347 Glucose/ribitol dehydrogenase YPO1460 IPR016040 NAD(P)-binding domain YPO1461 IPR024311 Lipocalin-like domain YPO1462 IPR009081 Acyl carrier protein-like YPO1463 IPR001227 Acyl transferase domain YPO1463 IPR014043 Acyl transferase YPO1463 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase YPO1463 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding YPO1463 IPR020801 Polyketide synthase, acyl transferase domain YPO1463 IPR024925 Malonyl CoA-acyl carrier protein transacylase YPO1465 IPR008312 Uncharacterised conserved protein UCP028301 YPO1466 IPR010269 Protein of unknown function DUF877 YPO1467 IPR010263 Protein of unknown function DUF876 YPO1468 IPR017732 Type IV / VI secretion system, DotU YPO1469 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal YPO1470 IPR008514 Type VI secretion system effector, Hcp YPO1471 IPR001270 ClpA/B family YPO1471 IPR003593 AAA+ ATPase domain YPO1471 IPR003959 ATPase, AAA-type, core YPO1471 IPR004176 Clp, N-terminal YPO1471 IPR017729 Type VI secretion system, ATPase ClpV1 YPO1471 IPR018368 ClpA/B, conserved site 1 YPO1471 IPR019489 Clp ATPase, C-terminal YPO1471 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1472 IPR006531 Gp5 N-terminal YPO1472 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPO1472 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPO1472 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal YPO1472 IPR027440 Capsid protein alpha-like domain YPO1472 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain YPO1473 IPR011055 Duplicated hybrid motif YPO1473 IPR016047 Peptidase M23 YPO1473 IPR023346 Lysozyme-like domain YPO1475 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal YPO1476 IPR011055 Duplicated hybrid motif YPO1476 IPR016047 Peptidase M23 YPO1476 IPR023346 Lysozyme-like domain YPO1477a IPR025959 Winged helix-turn helix domain YPO1482 IPR009612 ImcF-related YPO1482 IPR010623 Domain of unknown function DUF1215 YPO1483 IPR010657 ImpA, N-terminal YPO1483 IPR017739 Type VI secretion system-associated, VCA0119 YPO1484 IPR008727 PAAR motif YPO1484 IPR028946 Putative toxin 60 YPO1485 IPR010272 Type VI secretion system, VCA0110 YPO1486 IPR010732 Protein of unknown function DUF1305 YPO1487 IPR017734 Type VI secretion system, lipoprotein SciN YPO1488 IPR007048 GpW/Gp25/anti-adapter protein IraD YPO1488 IPR017737 Type VI secretion system, lysozyme-related protein YPO1489 IPR010657 ImpA, N-terminal YPO1489 IPR021069 ImpA, C-terminal YPO1490 IPR031829 YPO1490 YPO1491 IPR003439 ABC transporter-like YPO1491 IPR003593 AAA+ ATPase domain YPO1491 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1491 IPR032781 YPO1491 YPO1492 IPR031829 YPO1492 YPO1493 IPR001207 Transposase, mutator type YPO1494 IPR000594 UBA/THIF-type NAD/FAD binding fold YPO1494 IPR012730 Molybdopterin synthase sulfurylase MoeB YPO1494 IPR016040 NAD(P)-binding domain YPO1495 IPR001453 Molybdopterin binding domain YPO1495 IPR005110 MoeA, N-terminal and linker domain YPO1495 IPR005111 MoeA, C-terminal, domain IV YPO1495 IPR008284 Molybdenum cofactor biosynthesis, conserved site YPO1496 IPR007197 Radical SAM YPO1496 IPR013785 Aldolase-type TIM barrel YPO1496 IPR023885 4Fe4S-binding SPASM domain YPO1497 IPR003439 ABC transporter-like YPO1497 IPR003593 AAA+ ATPase domain YPO1497 IPR017871 ABC transporter, conserved site YPO1497 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1501 IPR000801 Putative esterase YPO1501 IPR014186 S-formylglutathione hydrolase YPO1501 IPR029058 Alpha/Beta hydrolase fold YPO1502 IPR002085 Alcohol dehydrogenase superfamily, zinc-type YPO1502 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site YPO1502 IPR011032 GroES (chaperonin 10)-like YPO1502 IPR013149 Alcohol dehydrogenase, C-terminal YPO1502 IPR013154 Alcohol dehydrogenase GroES-like YPO1502 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase YPO1502 IPR016040 NAD(P)-binding domain YPO1502 IPR020843 Polyketide synthase, enoylreductase YPO1503 IPR000847 Transcription regulator HTH, LysR YPO1503 IPR005119 LysR, substrate-binding YPO1503 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1504 IPR010645 Domain of unknown function DUF1228 YPO1504 IPR020846 Major facilitator superfamily domain YPO1505 IPR001474 GTP cyclohydrolase I YPO1505 IPR018234 GTP cyclohydrolase I, conserved site YPO1505 IPR020602 GTP cyclohydrolase I domain YPO1506 IPR007349 Domain of unknown function DUF418 YPO1507 IPR025997 Periplasmic binding protein domain YPO1507 IPR028082 Periplasmic binding protein-like I YPO1508 IPR003439 ABC transporter-like YPO1508 IPR003593 AAA+ ATPase domain YPO1508 IPR017871 ABC transporter, conserved site YPO1508 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1509 IPR001851 ABC transporter, permease YPO1509 IPR030158 YPO1509 YPO1510 IPR003848 Domain of unknown function DUF218 YPO1510 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO1510 IPR023604 Uncharacterised protein family SanA YPO1511 IPR001891 Malic oxidoreductase YPO1511 IPR012301 Malic enzyme, N-terminal domain YPO1511 IPR012302 Malic enzyme, NAD-binding YPO1511 IPR015884 Malic enzyme, conserved site YPO1511 IPR016040 NAD(P)-binding domain YPO1511 IPR023667 NAD-dependent malic enzyme, proteobacteria YPO1512 IPR002125 CMP/dCMP deaminase, zinc-binding YPO1512 IPR006263 Cytidine deaminase, homodimeric YPO1512 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain YPO1512 IPR016192 APOBEC/CMP deaminase, zinc-binding YPO1512 IPR016193 Cytidine deaminase-like YPO1512 IPR020797 Cytidine deaminase, bacteria YPO1513 IPR005261 Conserved hypothetical protein CHP00659 YPO1513 IPR007300 CidB/LrgB family YPO1514 IPR005538 LrgA/CidA family YPO1514 IPR022957 Uncharacterised protein family UPF0299 YPO1515 IPR011701 Major facilitator superfamily YPO1515 IPR020846 Major facilitator superfamily domain YPO1516 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain YPO1516 IPR013211 LVIVD YPO1517 IPR025997 Periplasmic binding protein domain YPO1517 IPR028082 Periplasmic binding protein-like I YPO1519 IPR001270 ClpA/B family YPO1519 IPR002611 IstB-like ATP-binding protein YPO1519 IPR003593 AAA+ ATPase domain YPO1519 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1519 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO1520 IPR001584 Integrase, catalytic core YPO1520 IPR006120 Resolvase, HTH domain YPO1520 IPR009057 Homeodomain-like YPO1520 IPR012337 Ribonuclease H-like domain YPO1521 IPR002686 Transposase IS200-like YPO1522 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPO1522 IPR002547 tRNA-binding domain YPO1522 IPR004495 Methionyl-tRNA synthetase, class Ia, beta subunit, C-terminal YPO1522 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding YPO1522 IPR012340 Nucleic acid-binding, OB-fold YPO1522 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO1522 IPR014758 Methionyl-tRNA synthetase YPO1522 IPR015413 Methionyl/Leucyl tRNA synthetase YPO1522 IPR023458 Methionine-tRNA ligase, type 1 YPO1522 IPR029038 Methionyl-tRNA synthetase, Zn-domain YPO1523 IPR000808 Mrp, conserved site YPO1523 IPR019591 Mrp/NBP35 ATP-binding protein YPO1523 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1524 IPR000764 Uridine kinase like YPO1524 IPR006083 Phosphoribulokinase/uridine kinase YPO1524 IPR026008 Uridine kinase YPO1524 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1525 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase YPO1525 IPR011962 Deoxycytidine triphosphate deaminase YPO1525 IPR029054 dUTPase-like YPO1526 IPR007844 AsmA YPO1526 IPR032712 YPO1526 YPO1527 IPR000644 CBS domain YPO1527 IPR005170 Transporter-associated domain YPO1527 IPR005496 Integral membrane protein TerC YPO1527 IPR016166 FAD-binding, type 2 YPO1527 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 YPO1528 IPR008090 Ferric iron reductase YPO1528 IPR022770 Ferric iron reductase FhuF domain YPO1528 IPR024726 Ferric iron reductase, C-terminal YPO1529 IPR002129 Pyridoxal phosphate-dependent decarboxylase YPO1529 IPR010977 Aromatic-L-amino-acid decarboxylase YPO1529 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPO1529 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPO1529 IPR015424 Pyridoxal phosphate-dependent transferase YPO1530 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPO1530 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase YPO1531 IPR016181 Acyl-CoA N-acyltransferase YPO1531 IPR019432 Siderophore biosynthesis protein, conserved domain YPO1532 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal YPO1532 IPR022770 Ferric iron reductase FhuF domain YPO1533 IPR003439 ABC transporter-like YPO1533 IPR003593 AAA+ ATPase domain YPO1533 IPR017871 ABC transporter, conserved site YPO1533 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1534 IPR000522 ABC transporter, permease protein YPO1534 IPR029022 ABC transporter, BtuC-like YPO1535 IPR000522 ABC transporter, permease protein YPO1535 IPR029022 ABC transporter, BtuC-like YPO1536 IPR002491 ABC transporter periplasmic binding domain YPO1537 IPR000531 TonB-dependent receptor, beta-barrel YPO1537 IPR010105 TonB-dependent siderophore receptor YPO1537 IPR010917 TonB-dependent receptor, conserved site YPO1537 IPR012910 TonB-dependent receptor, plug YPO1538 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal YPO1538 IPR022770 Ferric iron reductase FhuF domain YPO1539 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type YPO1539 IPR005835 Nucleotidyl transferase YPO1539 IPR029044 Nucleotide-diphospho-sugar transferases YPO1540 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type YPO1540 IPR005835 Nucleotidyl transferase YPO1540 IPR029044 Nucleotide-diphospho-sugar transferases YPO1541 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating YPO1541 IPR006114 6-phosphogluconate dehydrogenase, C-terminal YPO1541 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding YPO1541 IPR006183 YPO1541 YPO1541 IPR006184 6-phosphogluconate-binding site YPO1541 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YPO1541 IPR012284 Fibritin/6-phosphogluconate dehydrogenase, C-terminal extension YPO1541 IPR013328 Dehydrogenase, multihelical YPO1541 IPR016040 NAD(P)-binding domain YPO1542 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain YPO1542 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase YPO1542 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like YPO1542 IPR023019 Histidine biosynthesis bifunctional protein HisIE YPO1543 IPR004651 Histidine biosynthesis, HisF YPO1543 IPR006062 Histidine biosynthesis YPO1543 IPR011060 Ribulose-phosphate binding barrel YPO1543 IPR013785 Aldolase-type TIM barrel YPO1544 IPR006062 Histidine biosynthesis YPO1544 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA YPO1544 IPR011060 Ribulose-phosphate binding barrel YPO1544 IPR013785 Aldolase-type TIM barrel YPO1544 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase YPO1545 IPR010139 Imidazole glycerol phosphate synthase, subunit H YPO1545 IPR017926 Glutamine amidotransferase YPO1545 IPR029062 Class I glutamine amidotransferase-like YPO1546 IPR000807 Imidazoleglycerol-phosphate dehydratase YPO1546 IPR005954 Histidinol-phosphatase YPO1546 IPR006543 Histidinol-phosphate phosphatase YPO1546 IPR006549 HAD-superfamily hydrolase,subfamily IIIA YPO1546 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site YPO1546 IPR020566 Histidine biosynthesis bifunctional protein HisB YPO1546 IPR020568 Ribosomal protein S5 domain 2-type fold YPO1546 IPR023214 HAD-like domain YPO1547 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site YPO1547 IPR004839 Aminotransferase, class I/classII YPO1547 IPR005861 Histidinol-phosphate aminotransferase family YPO1547 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPO1547 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPO1547 IPR015424 Pyridoxal phosphate-dependent transferase YPO1548 IPR001692 Histidinol dehydrogenase, conserved site YPO1548 IPR012131 Histidinol dehydrogenase YPO1548 IPR016161 Aldehyde/histidinol dehydrogenase YPO1548 IPR022695 Histidinol dehydrogenase, monofunctional YPO1549 IPR001348 ATP phosphoribosyltransferase HisG YPO1549 IPR011322 Nitrogen regulatory PII-like, alpha/beta YPO1549 IPR013115 Histidine biosynthesis HisG, C-terminal YPO1549 IPR013820 ATP phosphoribosyltransferase, catalytic domain YPO1549 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal YPO1549 IPR018198 ATP phosphoribosyltransferase, conserved site YPO1549 IPR020621 ATP phosphoribosyltransferase HisG, long form YPO1551 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain YPO1551 IPR016040 NAD(P)-binding domain YPO1552 IPR032032 YPO1552 YPO1553 IPR001851 ABC transporter, permease YPO1556 IPR001670 Alcohol dehydrogenase, iron-type YPO1556 IPR018211 Alcohol dehydrogenase, iron-type, conserved site YPO1557 IPR002293 Amino acid/polyamine transporter I YPO1558 IPR012337 Ribonuclease H-like domain YPO1558 IPR013520 Exonuclease, RNase T/DNA polymerase III YPO1558 IPR013620 Exonuclease C-terminal YPO1558 IPR023607 Exodeoxyribonuclease I YPO1559 IPR013120 Male sterility, NAD-binding YPO1559 IPR016040 NAD(P)-binding domain YPO1560 IPR007458 Protein of unknown function DUF496 YPO1561 IPR001207 Transposase, mutator type YPO1562 IPR003344 Bacterial Ig-like, group 1 YPO1562 IPR003535 Intimin/invasin bacterial adhesion mediator protein YPO1562 IPR008964 Invasin/intimin cell-adhesion YPO1562 IPR015217 Invasin, domain 3 YPO1562 IPR016186 C-type lectin-like YPO1562 IPR024519 Domain of unknown function DUF3442, intimin/invasin YPO1563 IPR011701 Major facilitator superfamily YPO1563 IPR020846 Major facilitator superfamily domain YPO1564 IPR007263 Protein of unknown function DUF393 YPO1565 IPR002347 Glucose/ribitol dehydrogenase YPO1565 IPR016040 NAD(P)-binding domain YPO1565 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPO1566 IPR011234 Fumarylacetoacetase, C-terminal-related YPO1567 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase YPO1567 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain YPO1567 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal YPO1567 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site YPO1567 IPR029017 Enolase N-terminal domain-like YPO1567 IPR029065 Enolase C-terminal domain-like YPO1569 IPR000262 FMN-dependent dehydrogenase YPO1569 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site YPO1569 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent YPO1569 IPR013785 Aldolase-type TIM barrel YPO1569 IPR020920 L-lactate dehydrogenase, bacterial YPO1570 IPR001518 Argininosuccinate synthase YPO1570 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO1570 IPR018223 Argininosuccinate synthase, conserved site YPO1570 IPR023437 Argininosuccinate synthase, type 2 subfamily YPO1570 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail YPO1570 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body YPO1571 IPR002528 Multi antimicrobial extrusion protein YPO1572 IPR005829 Sugar transporter, conserved site YPO1572 IPR011701 Major facilitator superfamily YPO1572 IPR020846 Major facilitator superfamily domain YPO1573 IPR002509 Polysaccharide deacetylase YPO1573 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YPO1575 IPR018636 Protein of unknown function DUF2058 YPO1576 IPR000792 Transcription regulator LuxR, C-terminal YPO1576 IPR001789 Signal transduction response regulator, receiver domain YPO1576 IPR011006 CheY-like superfamily YPO1576 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1576 IPR016032 Signal transduction response regulator, C-terminal effector YPO1577 IPR004681 TRAP transporter permease protein YPO1577 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit YPO1578 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component YPO1579 IPR004682 TRAP dicarboxylate transporter YPO1579 IPR018389 Bacterial extracellular solute-binding protein, family 7 YPO1580 IPR003542 Enterobactin synthetase-like, component D YPO1580 IPR008278 4'-phosphopantetheinyl transferase superfamily YPO1581 IPR000111 Glycoside hydrolase, clan GH-D YPO1581 IPR002252 Glycoside hydrolase, family 36 YPO1581 IPR013785 Aldolase-type TIM barrel YPO1581 IPR017853 Glycoside hydrolase, superfamily YPO1581 IPR031704 YPO1581 YPO1582 IPR000576 LacY/RafB permease family YPO1582 IPR020846 Major facilitator superfamily domain YPO1583 IPR001207 Transposase, mutator type YPO1583a IPR025730 Biofilm regulator BssS YPO1584 IPR025730 Biofilm regulator BssS YPO1586 IPR010391 DNA damage-inducible protein DinI-like YPO1587 IPR002195 Dihydroorotase, conserved site YPO1587 IPR004721 Dihydroorotase homodimeric type YPO1587 IPR006680 Amidohydrolase 1 YPO1587 IPR032466 YPO1587 YPO1588 IPR007138 Antibiotic biosynthesis monooxygenase-like domain YPO1588 IPR011008 Dimeric alpha-beta barrel YPO1589 IPR001207 Transposase, mutator type YPO1590 IPR003029 Ribosomal protein S1, RNA-binding domain YPO1590 IPR004659 Ribonuclease E/G YPO1590 IPR012340 Nucleic acid-binding, OB-fold YPO1590 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G YPO1590 IPR021968 Polyribonucleotide phosphorylase C-terminal YPO1590 IPR022967 RNA-binding domain, S1 YPO1590 IPR028878 Ribonuclease E YPO1591 IPR002942 RNA-binding S4 domain YPO1591 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F YPO1591 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site YPO1591 IPR006225 Pseudouridine synthase, RluC/RluD YPO1591 IPR020103 Pseudouridine synthase, catalytic domain YPO1592 IPR002686 Transposase IS200-like YPO1593 IPR003697 Maf-like protein YPO1593 IPR029001 Inosine triphosphate pyrophosphatase-like YPO1594 IPR003772 Protein of unknown function DUF177 YPO1595 IPR002677 Ribosomal protein L32p YPO1595 IPR011332 Zinc-binding ribosomal protein YPO1596 IPR003664 Fatty acid synthesis PlsX protein YPO1596 IPR012281 Phospholipid biosynthesis protein, PlsX-like YPO1596 IPR024084 Isopropylmalate dehydrogenase-like domain YPO1597 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 YPO1597 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal YPO1597 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YPO1597 IPR016039 Thiolase-like YPO1598 IPR001227 Acyl transferase domain YPO1598 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type YPO1598 IPR014043 Acyl transferase YPO1598 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase YPO1598 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding YPO1598 IPR020801 Polyketide synthase, acyl transferase domain YPO1598 IPR024925 Malonyl CoA-acyl carrier protein transacylase YPO1599 IPR002347 Glucose/ribitol dehydrogenase YPO1599 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase YPO1599 IPR016040 NAD(P)-binding domain YPO1599 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPO1600 IPR003231 Acyl carrier protein (ACP) YPO1600 IPR006162 Phosphopantetheine attachment site YPO1600 IPR009081 Acyl carrier protein-like YPO1601 IPR014030 Beta-ketoacyl synthase, N-terminal YPO1601 IPR014031 Beta-ketoacyl synthase, C-terminal YPO1601 IPR016039 Thiolase-like YPO1601 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 YPO1601 IPR018201 Beta-ketoacyl synthase, active site YPO1601 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPO1602 IPR002686 Transposase IS200-like YPO1603 IPR001544 Aminotransferase, class IV YPO1603 IPR017824 Aminodeoxychorismate lyase, class IV YPO1603 IPR018300 Aminotransferase, class IV, conserved site YPO1604 IPR003770 Uncharacterised protein family UPF0755, YceG-like YPO1604 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain YPO1605 IPR018094 Thymidylate kinase YPO1605 IPR018095 Thymidylate kinase, conserved site YPO1605 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1606 IPR004622 DNA polymerase III, delta prime subunit YPO1606 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal YPO1606 IPR015199 DNA polymerase III, delta subunit, C-terminal YPO1606 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1607 IPR001130 TatD family YPO1607 IPR015991 Uncharacterised deoxyribonuclease TatD-type YPO1607 IPR018228 Deoxyribonuclease, TatD-related, conserved site YPO1607 IPR032466 YPO1607 YPO1608 IPR001996 Phosphotransferase system, IIB component, type 1 YPO1608 IPR003352 Phosphotransferase system, EIIC YPO1608 IPR011299 PTS system glucose-specific IIBC component YPO1608 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site YPO1609 IPR002686 Transposase IS200-like YPO1610 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal YPO1610 IPR016040 NAD(P)-binding domain YPO1611 IPR001310 Histidine triad (HIT) protein YPO1611 IPR011146 HIT-like domain YPO1611 IPR019808 Histidine triad, conserved site YPO1612 IPR010824 Protein of unknown function DUF1425 YPO1613 IPR014094 Penicillin-binding protein activator LpoB YPO1614 IPR002575 Aminoglycoside phosphotransferase YPO1614 IPR011009 Protein kinase-like domain YPO1614 IPR014093 Thiamine kinase YPO1615 IPR001764 Glycoside hydrolase, family 3, N-terminal YPO1615 IPR017853 Glycoside hydrolase, superfamily YPO1615 IPR019800 Glycoside hydrolase, family 3, active site YPO1615 IPR022956 Beta-hexosaminidase, bacterial YPO1616 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA YPO1616 IPR022987 Uncharacterised protein family UPF0227 YPO1616 IPR029058 Alpha/Beta hydrolase fold YPO1617 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPO1621 IPR001207 Transposase, mutator type YPO1622 IPR001270 ClpA/B family YPO1622 IPR002611 IstB-like ATP-binding protein YPO1622 IPR003593 AAA+ ATPase domain YPO1622 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1622 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO1623 IPR001584 Integrase, catalytic core YPO1623 IPR006120 Resolvase, HTH domain YPO1623 IPR009057 Homeodomain-like YPO1623 IPR012337 Ribonuclease H-like domain YPO1624 IPR008816 Glycine zipper 2TM domain YPO1625 IPR001650 Helicase, C-terminal YPO1625 IPR003711 CarD-like/TRCF domain YPO1625 IPR004576 Transcription-repair coupling factor YPO1625 IPR005118 Transcription-repair-coupling factor, C-terminal domain YPO1625 IPR011545 DEAD/DEAH box helicase domain YPO1625 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YPO1625 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1626 IPR003838 Permease FtsX-like YPO1626 IPR011925 Lipoprotein releasing system, transmembrane protein, LolC/E family YPO1626 IPR025857 MacB-like periplasmic core domain YPO1627 IPR003439 ABC transporter-like YPO1627 IPR003593 AAA+ ATPase domain YPO1627 IPR011924 Lipoprotein releasing system, ATP-binding protein YPO1627 IPR017871 ABC transporter, conserved site YPO1627 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1628 IPR003838 Permease FtsX-like YPO1628 IPR011925 Lipoprotein releasing system, transmembrane protein, LolC/E family YPO1628 IPR011926 Lipoprotein releasing system, transmembrane protein LolE YPO1628 IPR025857 MacB-like periplasmic core domain YPO1629 IPR000600 ROK YPO1630 IPR003000 Sirtuin family YPO1630 IPR026591 Sirtuin family, catalytic core small domain YPO1630 IPR027546 Sirtuin, class III YPO1630 IPR029035 DHS-like NAD/FAD-binding domain YPO1631 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site YPO1631 IPR002933 Peptidase M20 YPO1631 IPR010161 Peptidase M20B, tripeptide aminopeptidase YPO1631 IPR011650 Peptidase M20, dimerisation domain YPO1632 IPR003347 JmjC domain YPO1633 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO1633 IPR003660 HAMP linker domain YPO1633 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPO1633 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPO1633 IPR015014 PhoQ Sensor YPO1634 IPR001789 Signal transduction response regulator, receiver domain YPO1634 IPR001867 Signal transduction response regulator, C-terminal YPO1634 IPR011006 CheY-like superfamily YPO1634 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1635 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel YPO1635 IPR027385 Outer membrane protein beta-barrel YPO1636 IPR000362 Fumarate lyase family YPO1636 IPR004769 Adenylosuccinate lyase YPO1636 IPR008948 L-Aspartase-like YPO1636 IPR013539 Adenylosuccinate lyase PurB, C-terminal YPO1636 IPR020557 Fumarate lyase, conserved site YPO1636 IPR022761 Fumarate lyase, N-terminal YPO1636 IPR024083 Fumarase/histidase, N-terminal YPO1637 IPR007451 Uncharacterised protein family UPF0274 YPO1638 IPR004506 tRNA-specific 2-thiouridylase YPO1638 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO1638 IPR023382 Adenine nucleotide alpha hydrolase-like domains YPO1639 IPR000086 NUDIX hydrolase domain YPO1639 IPR015797 NUDIX hydrolase domain-like YPO1639 IPR020084 NUDIX hydrolase, conserved site YPO1639 IPR020476 NUDIX hydrolase YPO1640 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F YPO1640 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F YPO1640 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site YPO1640 IPR020103 Pseudouridine synthase, catalytic domain YPO1641 IPR001804 Isocitrate and isopropylmalate dehydrogenases family YPO1641 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic YPO1641 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site YPO1641 IPR024084 Isopropylmalate dehydrogenase-like domain YPO1642 IPR000843 Transcription regulator HTH, LacI YPO1642 IPR001761 Periplasmic binding protein/LacI sugar binding domain YPO1642 IPR010982 Lambda repressor-like, DNA-binding domain YPO1642 IPR028082 Periplasmic binding protein-like I YPO1644 IPR000014 PAS domain YPO1644 IPR001610 PAC motif YPO1644 IPR003660 HAMP linker domain YPO1644 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YPO1644 IPR004090 Chemotaxis methyl-accepting receptor YPO1644 IPR013655 PAS fold-3 YPO1645 IPR008030 NmrA-like domain YPO1645 IPR016040 NAD(P)-binding domain YPO1646 IPR002577 Helix-turn-helix, HxlR type YPO1646 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1648 IPR000560 Histidine phosphatase superfamily, clade-2 YPO1648 IPR029033 Histidine phosphatase superfamily YPO1648 IPR033379 YPO1648 YPO1649 IPR017704 Putative selenium-binding protein YdfZ YPO1650 IPR021266 Kdo hydroxylase YPO1651 IPR000485 AsnC-type HTH domain YPO1651 IPR011008 Dimeric alpha-beta barrel YPO1651 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1651 IPR019887 Transcription regulator AsnC-type, C-terminal YPO1651 IPR019888 Transcription regulator AsnC-type YPO1652 IPR019713 Inner membrane protein YlaC YPO1653 IPR002085 Alcohol dehydrogenase superfamily, zinc-type YPO1653 IPR011032 GroES (chaperonin 10)-like YPO1653 IPR013149 Alcohol dehydrogenase, C-terminal YPO1653 IPR013154 Alcohol dehydrogenase GroES-like YPO1653 IPR014189 Quinone oxidoreductase PIG3 YPO1653 IPR016040 NAD(P)-binding domain YPO1653 IPR020843 Polyketide synthase, enoylreductase YPO1654 IPR004199 Beta galactosidase small chain/ domain 5 YPO1654 IPR006101 Glycoside hydrolase, family 2 YPO1654 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich YPO1654 IPR006103 Glycoside hydrolase, family 2, TIM barrel YPO1654 IPR006104 Glycosyl hydrolases family 2, sugar binding domain YPO1654 IPR008979 Galactose-binding domain-like YPO1654 IPR011013 Galactose mutarotase-like domain YPO1654 IPR013781 Glycoside hydrolase, catalytic domain YPO1654 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain YPO1654 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup YPO1654 IPR017853 Glycoside hydrolase, superfamily YPO1654 IPR023230 Glycoside hydrolase, family 2, conserved site YPO1654 IPR023232 Glycoside hydrolase, family 2, active site YPO1654 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase YPO1654 IPR032312 YPO1654 YPO1655 IPR002059 Cold-shock protein, DNA-binding YPO1655 IPR011129 Cold shock protein YPO1655 IPR012156 Cold shock, CspA YPO1655 IPR012340 Nucleic acid-binding, OB-fold YPO1655 IPR019844 Cold-shock conserved site YPO1656 IPR019717 Dextransucrase DSRB YPO1660 IPR003416 MgtC/SapB/SrpB transporter YPO1661 IPR001757 Cation-transporting P-type ATPase YPO1661 IPR004014 Cation-transporting P-type ATPase, N-terminal YPO1661 IPR006068 Cation-transporting P-type ATPase, C-terminal YPO1661 IPR006415 Magnesium-transporting P-type ATPase, subfamily IIIB YPO1661 IPR008250 P-type ATPase, A domain YPO1661 IPR018303 P-type ATPase, phosphorylation site YPO1661 IPR023214 HAD-like domain YPO1661 IPR023298 P-type ATPase, transmembrane domain YPO1661 IPR023299 P-type ATPase, cytoplasmic domain N YPO1663 IPR007944 Flagellar transcriptional activator FlhC YPO1664 IPR000540 Flagellar motor protein MotA, conserved site YPO1664 IPR002898 MotA/TolQ/ExbB proton channel YPO1664 IPR022522 Flagellar motor stator, MotA YPO1665 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal YPO1665 IPR025713 Motility protein B, N-terminal domain YPO1666 IPR002545 CheW-like protein YPO1666 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO1666 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPO1666 IPR004105 Histidine kinase CheA-like, homodimeric domain YPO1666 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPO1666 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain YPO1666 IPR015162 CheY binding YPO1667 IPR002545 CheW-like protein YPO1668 IPR011701 Major facilitator superfamily YPO1668 IPR020846 Major facilitator superfamily domain YPO1669 IPR006056 Enamine/imine deaminase YjgF-like YPO1669 IPR006175 YjgF/Yer057p/UK114 family YPO1669 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like YPO1670 IPR013022 Xylose isomerase-like, TIM barrel domain YPO1671 IPR013559 YheO-like YPO1672 IPR005546 Autotransporter beta-domain YPO1672 IPR006315 Outer membrane autotransporter barrel YPO1672 IPR011050 Pectin lyase fold/virulence factor YPO1672 IPR012332 P22 tailspike C-terminal domain-like YPO1673 IPR014600 Uncharacterised conserved protein UCP035905, membrane protein YPO1673 IPR019286 Protein of unknown function DUF2339, transmembrane YPO1675 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding YPO1675 IPR003660 HAMP linker domain YPO1675 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YPO1675 IPR004090 Chemotaxis methyl-accepting receptor YPO1675 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site YPO1678 IPR000780 MCP methyltransferase, CheR-type YPO1678 IPR022641 MCP methyltransferase, CheR-type, all-alpha domain, N-terminal YPO1678 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal YPO1678 IPR026024 Chemotaxis protein methyltransferase CheR YPO1678 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPO1679 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase YPO1679 IPR001789 Signal transduction response regulator, receiver domain YPO1679 IPR008248 Signal transduction response regulator, chemotaxis, CheB YPO1679 IPR011006 CheY-like superfamily YPO1680 IPR001789 Signal transduction response regulator, receiver domain YPO1680 IPR011006 CheY-like superfamily YPO1681 IPR007439 Chemotaxis phosphatase, CheZ YPO1683 IPR002477 Peptidoglycan binding-like YPO1683 IPR002502 N-acetylmuramoyl-L-alanine amidase domain YPO1684 IPR008635 Coiled stalk of trimeric autotransporter adhesin YPO1684 IPR008640 Head domain of trimeric autotransporter adhesin YPO1684 IPR011049 Serralysin-like metalloprotease, C-terminal YPO1687 IPR000821 Alanine racemase YPO1687 IPR001608 Alanine racemase, N-terminal YPO1687 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal YPO1687 IPR011079 Alanine racemase, C-terminal YPO1687 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site YPO1687 IPR029066 PLP-binding barrel YPO1689 IPR002641 Patatin/Phospholipase A2-related YPO1689 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase YPO1691 IPR001270 ClpA/B family YPO1691 IPR002611 IstB-like ATP-binding protein YPO1691 IPR003593 AAA+ ATPase domain YPO1691 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1691 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO1692 IPR001584 Integrase, catalytic core YPO1692 IPR006120 Resolvase, HTH domain YPO1692 IPR009057 Homeodomain-like YPO1692 IPR012337 Ribonuclease H-like domain YPO1693 IPR007374 ASCH domain YPO1693 IPR009326 Protein of unknown function DUF984 YPO1693 IPR015947 PUA-like domain YPO1694 IPR009950 Protein of unknown function DUF1480 YPO1695 IPR007893 Spore coat protein U YPO1696 IPR000015 Outer membrane usher protein YPO1696 IPR025949 PapC-like, C-terminal domain YPO1697 IPR008962 PapD-like YPO1697 IPR016147 PapD, N-terminal, bacterial YPO1698 IPR007893 Spore coat protein U YPO1699 IPR007893 Spore coat protein U YPO1700 IPR007893 Spore coat protein U YPO1701 IPR003399 Mammalian cell entry-related YPO1702 IPR005219 Conserved hypothetical protein CHP00155 YPO1702 IPR007498 Paraquat-inducible protein A YPO1703 IPR003018 GAF domain YPO1703 IPR029016 GAF domain-like YPO1704 IPR016103 ProQ/FinO domain YPO1704 IPR023529 Transporter ProP effector, ProQ YPO1705 IPR001478 PDZ domain YPO1705 IPR004447 C-terminal-processing peptidase S41A YPO1705 IPR005151 Tail specific protease YPO1705 IPR020992 Tail specific protease, C-terminal YPO1705 IPR029045 ClpP/crotonase-like domain YPO1706 IPR001915 Peptidase M48 YPO1706 IPR022919 Peptidase M48, protease HtpX, putative YPO1707 IPR000259 Fimbrial-type adhesion domain YPO1707 IPR008966 Adhesion domain YPO1708 IPR001829 Pili assembly chaperone, bacterial YPO1708 IPR008962 PapD-like YPO1708 IPR016147 PapD, N-terminal, bacterial YPO1708 IPR016148 Pili assembly chaperone, C-terminal domain YPO1708 IPR018046 Pili assembly chaperone, conserved site YPO1709 IPR000015 Outer membrane usher protein YPO1709 IPR018030 Fimbrial membrane usher, conserved site YPO1709 IPR025885 PapC, N-terminal domain YPO1709 IPR025949 PapC-like, C-terminal domain YPO1710 IPR000259 Fimbrial-type adhesion domain YPO1710 IPR008966 Adhesion domain YPO1711 IPR001829 Pili assembly chaperone, bacterial YPO1711 IPR008962 PapD-like YPO1711 IPR016147 PapD, N-terminal, bacterial YPO1711 IPR016148 Pili assembly chaperone, C-terminal domain YPO1711 IPR018046 Pili assembly chaperone, conserved site YPO1712 IPR011701 Major facilitator superfamily YPO1712 IPR020846 Major facilitator superfamily domain YPO1713 IPR015943 WD40/YVTN repeat-like-containing domain YPO1713 IPR027946 Oligogalacturonate lyase domain YPO1714 IPR005471 Transcription regulator IclR, N-terminal YPO1714 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1714 IPR014757 Transcription regulator IclR, C-terminal YPO1714 IPR029016 GAF domain-like YPO1715 IPR002477 Peptidoglycan binding-like YPO1715 IPR002502 N-acetylmuramoyl-L-alanine amidase domain YPO1716 IPR001991 Sodium:dicarboxylate symporter YPO1717 IPR007404 Protein of unknown function DUF457 YPO1717 IPR016956 LexA regulated metal-dependent membrane hydrolase, predicted YPO1718 IPR009331 Oligogalacturonate-specific porin YPO1719 IPR006059 Bacterial extracellular solute-binding, family 1 YPO1720 IPR003439 ABC transporter-like YPO1720 IPR003593 AAA+ ATPase domain YPO1720 IPR008995 Molybdate/tungstate binding, C-terminal YPO1720 IPR017871 ABC transporter, conserved site YPO1720 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1721 IPR000515 MetI-like domain YPO1722 IPR000515 MetI-like domain YPO1723 IPR010702 Periplasmic pectate lyase YPO1724 IPR002347 Glucose/ribitol dehydrogenase YPO1724 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase YPO1724 IPR016040 NAD(P)-binding domain YPO1724 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPO1725 IPR007045 5-keto 4-deoxyuronate isomerase YPO1725 IPR011051 RmlC-like cupin domain YPO1725 IPR021120 KduI/IolB isomerase YPO1725 IPR027447 5-keto-4-deoxyuronate isomerase, C-terminal domain YPO1725 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal domain YPO1726 IPR011051 RmlC-like cupin domain YPO1726 IPR013096 Cupin 2, conserved barrel YPO1726 IPR014710 RmlC-like jelly roll fold YPO1726 IPR025499 Pectin degradation protein KdgF YPO1727 IPR001207 Transposase, mutator type YPO1729 IPR001584 Integrase, catalytic core YPO1729 IPR006120 Resolvase, HTH domain YPO1729 IPR009057 Homeodomain-like YPO1729 IPR012337 Ribonuclease H-like domain YPO1730 IPR001270 ClpA/B family YPO1730 IPR002611 IstB-like ATP-binding protein YPO1730 IPR003593 AAA+ ATPase domain YPO1730 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1730 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO1732 IPR010384 MtfA family YPO1732 IPR024079 Metallopeptidase, catalytic domain YPO1733 IPR005545 YCII-related YPO1733 IPR011008 Dimeric alpha-beta barrel YPO1734 IPR000687 RIO kinase YPO1734 IPR011009 Protein kinase-like domain YPO1734 IPR018935 RIO kinase, conserved site YPO1735 IPR003439 ABC transporter-like YPO1735 IPR003593 AAA+ ATPase domain YPO1735 IPR011527 ABC transporter type 1, transmembrane domain YPO1735 IPR017871 ABC transporter, conserved site YPO1735 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1737 IPR009057 Homeodomain-like YPO1737 IPR018060 DNA binding HTH domain, AraC-type YPO1737 IPR020449 Transcription regulator HTH, AraC- type YPO1738 IPR020262 Uncharacterised protein family YecJ YPO1739 IPR025611 YobH-like protein YPO1740 IPR025594 YebO-like protein YPO1741 IPR019701 Bacteriophage P22, NinX YPO1742 IPR025135 Protein of unknown function DUF4060 YPO1743 IPR002293 Amino acid/polyamine transporter I YPO1743 IPR004840 Amino acid permease, conserved site YPO1743 IPR004841 Amino acid permease/ SLC12A domain YPO1744 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP YPO1744 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel YPO1745 IPR019672 Protein of unknown function DUF2627 YPO1746 IPR002059 Cold-shock protein, DNA-binding YPO1746 IPR011129 Cold shock protein YPO1746 IPR012156 Cold shock, CspA YPO1746 IPR012340 Nucleic acid-binding, OB-fold YPO1746 IPR019844 Cold-shock conserved site YPO1747 IPR003730 Multi-copper polyphenol oxidoreductase, laccase YPO1747 IPR011324 Cytotoxic necrotizing factor-like, catalytic YPO1748 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted YPO1748 IPR025714 Methyltransferase domain YPO1748 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPO1750 IPR001584 Integrase, catalytic core YPO1750 IPR006120 Resolvase, HTH domain YPO1750 IPR009057 Homeodomain-like YPO1750 IPR012337 Ribonuclease H-like domain YPO1751 IPR001270 ClpA/B family YPO1751 IPR002611 IstB-like ATP-binding protein YPO1751 IPR003593 AAA+ ATPase domain YPO1751 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1751 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO1751a IPR000014 PAS domain YPO1751a IPR000160 GGDEF domain YPO1751a IPR001610 PAC motif YPO1751a IPR013767 PAS fold YPO1751a IPR029787 Nucleotide cyclase YPO1753 IPR000531 TonB-dependent receptor, beta-barrel YPO1753 IPR010105 TonB-dependent siderophore receptor YPO1753 IPR010916 TonB box, conserved site YPO1753 IPR010917 TonB-dependent receptor, conserved site YPO1753 IPR012910 TonB-dependent receptor, plug YPO1753 IPR030149 YPO1753 YPO1754 IPR003810 Domain of unknown function DUF204 YPO1754 IPR022929 Putative manganese efflux pump MntP YPO1755 IPR009328 Protein of unknown function DUF986 YPO1756 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component YPO1756 IPR018405 Phosphotransferase system, mannose/fructose/sorbose family IID component, subgroup YPO1757 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit YPO1758 IPR004701 Phosphotransferase system, mannose-type IIA component YPO1758 IPR004720 Phosphotransferase system, sorbose subfamily IIB component YPO1758 IPR013789 Phosphotransferase system, mannose family IIA component YPO1758 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup YPO1760 IPR000835 MarR-type HTH domain YPO1760 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1760 IPR012712 Homoprotocatechuate degradation transcriptional regulator HpaR YPO1761 IPR011234 Fumarylacetoacetase, C-terminal-related YPO1761 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit YPO1761a IPR011234 Fumarylacetoacetase, C-terminal-related YPO1761a IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit YPO1763 IPR015590 Aldehyde dehydrogenase domain YPO1763 IPR016160 Aldehyde dehydrogenase, cysteine active site YPO1763 IPR016161 Aldehyde/histidinol dehydrogenase YPO1763 IPR016162 Aldehyde dehydrogenase, N-terminal YPO1763 IPR016163 Aldehyde dehydrogenase, C-terminal YPO1763 IPR029510 Aldehyde dehydrogenase, glutamic acid active site YPO1764 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B YPO1764 IPR011984 3,4-dihydroxyphenylacetate 2,3-dioxygenase HpaD-Fe YPO1765 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase YPO1765 IPR014347 Tautomerase/MIF superfamily YPO1766 IPR011234 Fumarylacetoacetase, C-terminal-related YPO1766 IPR012690 2-oxo-hepta-3-ene-1,7-dioic acid hydratase YPO1767 IPR005000 HpcH/HpaI aldolase/citrate lyase domain YPO1767 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase YPO1767 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain YPO1768 IPR011701 Major facilitator superfamily YPO1768 IPR012707 4-hydroxyphenylacetate permease YPO1768 IPR020846 Major facilitator superfamily domain YPO1768 IPR024671 Autophagy-related protein 22-like YPO1769 IPR004925 HpaB/PvcC/4-BUDH YPO1769 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal YPO1769 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain YPO1769 IPR012688 4-HPA 3-monooxygenase large component, gammaproteobacteria YPO1769 IPR024674 HpaB/PvcC/4-BUDH N-terminal YPO1769 IPR024677 4-HPA 3-monooxygenase large component/Pyoverdin chromophore biosynthetic protein YPO1769 IPR024719 HpaB/PvcC/4-BUDH C-terminal YPO1770 IPR002563 Flavin reductase-like, FMN-binding YPO1770 IPR011982 4-hydroxyphenylacetate 3-monooxygenase, reductase component YPO1770 IPR012349 FMN-binding split barrel YPO1771 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form YPO1771 IPR005130 Serine dehydratase-like, alpha subunit YPO1771 IPR005131 Serine dehydratase beta chain YPO1771 IPR029009 Allosteric substrate binding domain YPO1772 IPR000059 NUDIX hydrolase, NudL, conserved site YPO1772 IPR000086 NUDIX hydrolase domain YPO1772 IPR015797 NUDIX hydrolase domain-like YPO1772 IPR023735 Uncharacterised nudix hydrolase NudL YPO1773 IPR005801 ADC synthase YPO1773 IPR005802 Para-aminobenzoate synthase, component I YPO1773 IPR006805 Anthranilate synthase component I, N-terminal YPO1773 IPR015890 Chorismate binding, C-terminal YPO1773 IPR019999 Anthranilate synthase component I - like YPO1774 IPR005371 Uncharacterised protein family UPF0181 YPO1775 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type YPO1775 IPR005862 Phosphoribosylglycinamide formyltransferase 2 YPO1775 IPR011054 Rudiment single hybrid motif YPO1775 IPR013815 ATP-grasp fold, subdomain 1 YPO1775 IPR013816 ATP-grasp fold, subdomain 2 YPO1775 IPR016185 Pre-ATP-grasp domain YPO1776 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site YPO1776 IPR001650 Helicase, C-terminal YPO1776 IPR005580 DbpA, RNA-binding YPO1776 IPR011545 DEAD/DEAH box helicase domain YPO1776 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YPO1776 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1776 IPR028619 ATP-dependent RNA helicase DbpA YPO1777 IPR009813 Uncharacterised protein family YebG YPO1778 IPR007374 ASCH domain YPO1778 IPR008314 Uncharacterised conserved protein UCP029143 YPO1778 IPR015947 PUA-like domain YPO1779 IPR020236 Uncharacterised protein family YebF YPO1779 IPR025603 YebF/Colicin-M immunity protein YPO1780 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain YPO1780 IPR002470 Peptidase S9A, prolyl oligopeptidase YPO1780 IPR023302 Peptidase S9A, N-terminal domain YPO1780 IPR029058 Alpha/Beta hydrolase fold YPO1781 IPR000073 Alpha/beta hydrolase fold-1 YPO1781 IPR002410 Peptidase S33 YPO1781 IPR005944 Proline iminopeptidase YPO1781 IPR029058 Alpha/Beta hydrolase fold YPO1782 IPR009052 DNA polymerase III-theta, bacterial YPO1782 IPR011325 DNA polymerase III-theta, core, bacterial YPO1783 IPR001519 Ferritin YPO1783 IPR008331 Ferritin/DPS protein domain YPO1783 IPR009078 Ferritin-like superfamily YPO1783 IPR012347 Ferritin-related YPO1784 IPR007348 CopC domain YPO1784 IPR014755 Copper resistance protein CopC/internalin, immunoglobulin-like YPO1784 IPR014756 Immunoglobulin E-set YPO1784 IPR032694 YPO1784 YPO1785 IPR008457 Copper resistance D YPO1786 IPR019648 Protein of unknown function DUF2511 YPO1788 IPR009081 Acyl carrier protein-like YPO1788 IPR010862 Protein of unknown function DUF1493 YPO1790 IPR006135 Type III secretion system substrate exporter YPO1790 IPR006136 Type III exporter system, flagellar biosynthetic protein FlhB YPO1790 IPR029025 Type III secretion system substrate exporter, C-terminal YPO1791 IPR001712 Type III secretion system FHIPEP YPO1791 IPR006301 Flagellar biosynthesis protein FlhA YPO1791 IPR025505 FHIPEP conserved site YPO1792 IPR009420 Flagellar FlhE YPO1794 IPR002686 Transposase IS200-like YPO1796 IPR007809 FlgN-like domain YPO1797 IPR007412 Anti-sigma-28 factor, FlgM YPO1797 IPR031316 YPO1797 YPO1798 IPR013974 SAF domain YPO1798 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal YPO1799 IPR001444 Flagellar basal body rod protein, N-terminal YPO1799 IPR006300 Flagellar basal-body rod protein FlgB YPO1799 IPR019776 Flagellar basal body rod protein, conserved site YPO1800 IPR001444 Flagellar basal body rod protein, N-terminal YPO1800 IPR006299 Flagellar basal-body rod protein FlgC YPO1800 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPO1800 IPR019776 Flagellar basal body rod protein, conserved site YPO1801 IPR005648 Flagellar hook capping protein YPO1801 IPR025963 FlgD Tudor-like domain YPO1801 IPR025965 FlgD Ig-like domain YPO1802 IPR001444 Flagellar basal body rod protein, N-terminal YPO1802 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPO1802 IPR011491 Flagellar basal body FlaE YPO1802 IPR019776 Flagellar basal body rod protein, conserved site YPO1802 IPR020013 Fagellar hook-basal body protein, FlgE/F/G YPO1803 IPR001444 Flagellar basal body rod protein, N-terminal YPO1803 IPR020013 Fagellar hook-basal body protein, FlgE/F/G YPO1804 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPO1804 IPR012834 Flagellar basal-body rod FlgG YPO1804 IPR020013 Fagellar hook-basal body protein, FlgE/F/G YPO1805 IPR000527 Flagellar L-ring protein YPO1806 IPR001782 Flagellar P-ring protein YPO1807 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain YPO1807 IPR013377 Flagellar rod assembly protein/muramidase FlgJ YPO1807 IPR019301 Flagellar protein FlgJ, N-terminal YPO1808 IPR001444 Flagellar basal body rod protein, N-terminal YPO1808 IPR002371 Flagellar hook-associated protein, FlgK YPO1808 IPR010930 Flagellar basal-body/hook protein, C-terminal domain YPO1809 IPR001029 Flagellin, D0/D1 domain YPO1809 IPR013384 Flagellar hook-associated protein 3 YPO1810 IPR007324 Sugar-binding domain, putative YPO1810 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1810 IPR013324 RNA polymerase sigma factor, region 3/4 YPO1811 IPR001303 Class II aldolase/adducin N-terminal YPO1811 IPR002347 Glucose/ribitol dehydrogenase YPO1811 IPR016040 NAD(P)-binding domain YPO1811 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPO1812 IPR001851 ABC transporter, permease YPO1813 IPR025997 Periplasmic binding protein domain YPO1813 IPR028082 Periplasmic binding protein-like I YPO1814 IPR003439 ABC transporter-like YPO1814 IPR003593 AAA+ ATPase domain YPO1814 IPR017871 ABC transporter, conserved site YPO1814 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1815 IPR001851 ABC transporter, permease YPO1816 IPR011611 Carbohydrate kinase PfkB YPO1816 IPR029056 Ribokinase-like YPO1817 IPR013321 Arc-type ribbon-helix-helix YPO1817 IPR031807 YPO1817 YPO1818 IPR012933 HicA mRNA interferase family YPO1819 IPR002010 Type III secretion system inner membrane R protein YPO1819 IPR006303 Flagellar biosynthesis protein FliR YPO1820 IPR005837 Flagellar transport protein FliP YPO1820 IPR005838 Type III secretion system inner membrane P protein YPO1820a IPR002191 Bacterial export protein family 3 YPO1820a IPR006305 Flagellar biosynthesis protein FliQ YPO1821 IPR022781 Flagellar biosynthesis protein, FliO YPO1822 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb YPO1822 IPR001543 Surface presentation of antigen (SpoA) YPO1822 IPR012826 Flagellar motor switch FliN YPO1822 IPR031576 YPO1822 YPO1823 IPR001543 Surface presentation of antigen (SpoA) YPO1823 IPR001689 Flagellar motor switch protein FliM YPO1823 IPR028976 CheC-like domain YPO1824 IPR005503 Flagellar basal body-associated protein FliL YPO1825 IPR001635 Flagellar hook-length control protein FliK YPO1825 IPR021136 Flagellar hook-length control protein-like, C-terminal YPO1826 IPR012823 Flagellar export FliJ YPO1826 IPR018006 Flagellar FliJ, proteobacteria YPO1827 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain YPO1827 IPR003593 AAA+ ATPase domain YPO1827 IPR005714 ATPase, type III secretion system, FliI/YscN YPO1827 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site YPO1827 IPR020005 Flagellar export ATPase FliI, clade 1 YPO1827 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1827 IPR032463 YPO1827 YPO1828 IPR000563 Flagellar assembly protein FliH YPO1828 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE YPO1829 IPR000090 Flagellar motor switch protein FliG YPO1829 IPR011002 Flagellar motor switch protein FliG, alpha-helical YPO1829 IPR023087 YPO1829 YPO1829 IPR028263 Flagellar motor switch protein FliG, N-terminal domain YPO1829 IPR032779 YPO1829 YPO1830 IPR000067 Flagellar M-ring protein FliF YPO1830 IPR006182 Secretory protein YscJ/FliF YPO1830 IPR013556 Flagellar M-ring C-terminal YPO1831 IPR001624 Flagellar hook-basal body complex protein FliE YPO1833 IPR003812 Fido domain YPO1833 IPR006440 Death on curing protein YPO1834 IPR003265 HhH-GPD domain YPO1834 IPR011257 DNA glycosylase YPO1834 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal YPO1837 IPR003313 AraC-type arabinose-binding/dimerisation domain YPO1837 IPR009057 Homeodomain-like YPO1837 IPR018060 DNA binding HTH domain, AraC-type YPO1837 IPR020449 Transcription regulator HTH, AraC- type YPO1839 IPR008622 Flagellar protein FliT YPO1840 IPR003713 Flagellar protein FliS YPO1841 IPR003481 Flagellar hook-associated protein 2, N-terminal YPO1841 IPR010809 Flagellar hook-associated 2, C-terminal YPO1841 IPR010810 Flagellin hook, IN motif YPO1842 IPR001029 Flagellin, D0/D1 domain YPO1842 IPR001492 Flagellin YPO1843 IPR000943 RNA polymerase sigma-70 YPO1843 IPR007624 RNA polymerase sigma-70 region 3 YPO1843 IPR007627 RNA polymerase sigma-70 region 2 YPO1843 IPR007630 RNA polymerase sigma-70 region 4 YPO1843 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1843 IPR012845 RNA polymerase sigma factor, FliA/WhiG YPO1843 IPR013324 RNA polymerase sigma factor, region 3/4 YPO1843 IPR013325 RNA polymerase sigma factor, region 2 YPO1843 IPR014284 RNA polymerase sigma-70 like domain YPO1843 IPR016263 RNA polymerase sporulation-specific sigma factor, SigK/SigE YPO1843 IPR028617 RNA polymerase sigma factor FliA YPO1844 IPR004107 Integrase, SAM-like, N-terminal YPO1844 IPR022523 Flagellar regulator, FliZ YPO1845 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPO1845 IPR005966 D-cysteine desulfhydrase YPO1845 IPR023702 D-cysteine desulphhydrase, bacterial YPO1845 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase YPO1846 IPR001320 Ionotropic glutamate receptor YPO1846 IPR001638 Extracellular solute-binding protein, family 3 YPO1846 IPR018313 Extracellular solute-binding protein, family 3, conserved site YPO1847 IPR000515 MetI-like domain YPO1847 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family YPO1848 IPR003439 ABC transporter-like YPO1848 IPR003593 AAA+ ATPase domain YPO1848 IPR017871 ABC transporter, conserved site YPO1848 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1848 IPR030679 YPO1848 YPO1849 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1851 IPR002872 Proline dehydrogenase domain YPO1851 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 YPO1851 IPR010985 Ribbon-helix-helix YPO1851 IPR015590 Aldehyde dehydrogenase domain YPO1851 IPR016160 Aldehyde dehydrogenase, cysteine active site YPO1851 IPR016161 Aldehyde/histidinol dehydrogenase YPO1851 IPR016162 Aldehyde dehydrogenase, N-terminal YPO1851 IPR016163 Aldehyde dehydrogenase, C-terminal YPO1851 IPR024082 Proline dehydrogenase PutA, domain II YPO1851 IPR024089 Proline dehydrogenase PutA, domain I/II YPO1851 IPR024090 Proline dehydrogenase PutA, domain I YPO1851 IPR025703 Bifunctional protein PutA YPO1851 IPR029041 FAD-linked oxidoreductase-like YPO1851 IPR029510 Aldehyde dehydrogenase, glutamic acid active site YPO1853 IPR001734 Sodium/solute symporter YPO1853 IPR011851 Sodium/proline symporter YPO1853 IPR018212 Sodium/solute symporter, conserved site YPO1854 IPR004923 Iron permease FTR1/Fip1/EfeU YPO1855 IPR008972 Cupredoxin YPO1855 IPR028096 EfeO-type cupredoxin-like domain YPO1856 IPR006313 Deferrochelatase/peroxidase EfeB YPO1856 IPR006314 Dyp-type peroxidase YPO1856 IPR011008 Dimeric alpha-beta barrel YPO1857 IPR005025 NADPH-dependent FMN reductase-like YPO1857 IPR010089 Flavoprotein WrbA YPO1857 IPR029039 Flavoprotein-like YPO1858 IPR006652 Kelch repeat type 1 YPO1858 IPR015915 Kelch-type beta propeller YPO1858 IPR019936 Mutatrotase, YjhT-like YPO1859 IPR002293 Amino acid/polyamine transporter I YPO1859 IPR004840 Amino acid permease, conserved site YPO1859 IPR004841 Amino acid permease/ SLC12A domain YPO1860 IPR000758 Virulence-related outer membrane protein YPO1860 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel YPO1860 IPR027385 Outer membrane protein beta-barrel YPO1863 IPR009707 GlpM YPO1864 IPR019705 Protein of unknown function DUF2594 YPO1865 IPR000792 Transcription regulator LuxR, C-terminal YPO1865 IPR001789 Signal transduction response regulator, receiver domain YPO1865 IPR011006 CheY-like superfamily YPO1865 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1865 IPR016032 Signal transduction response regulator, C-terminal effector YPO1866 IPR000305 GIY-YIG nuclease superfamily YPO1866 IPR001162 UvrC family homology region YPO1866 IPR001943 UVR domain YPO1866 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 YPO1866 IPR004791 UvrABC system, subunit C YPO1866 IPR010994 RuvA domain 2-like YPO1866 IPR027299 GIY-YIG domain YPO1867 IPR000462 CDP-alcohol phosphatidyltransferase YPO1867 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YPO1867 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial YPO1868 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPO1868 IPR013762 Integrase-like, catalytic core YPO1868 IPR023109 Integrase/recombinase, N-terminal YPO1873 IPR001584 Integrase, catalytic core YPO1873 IPR012337 Ribonuclease H-like domain YPO1874 IPR002514 Transposase IS3/IS911family YPO1874 IPR009057 Homeodomain-like YPO1874 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1880 IPR007048 GpW/Gp25/anti-adapter protein IraD YPO1881 IPR006531 Gp5 N-terminal YPO1881 IPR013046 Bacteriophage Mu/P2, baseplate assembly YPO1882 IPR025528 Protein of unknown function DUF4415 YPO1883 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain YPO1890 IPR000524 Transcription regulator HTH, GntR YPO1890 IPR011663 UbiC transcription regulator-associated YPO1890 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1890 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain YPO1892 IPR000683 Oxidoreductase, N-terminal YPO1892 IPR016040 NAD(P)-binding domain YPO1893 IPR006059 Bacterial extracellular solute-binding, family 1 YPO1894 IPR000515 MetI-like domain YPO1895 IPR000515 MetI-like domain YPO1900 IPR001584 Integrase, catalytic core YPO1900 IPR006120 Resolvase, HTH domain YPO1900 IPR009057 Homeodomain-like YPO1900 IPR012337 Ribonuclease H-like domain YPO1901 IPR001270 ClpA/B family YPO1901 IPR002611 IstB-like ATP-binding protein YPO1901 IPR003593 AAA+ ATPase domain YPO1901 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1901 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO1902 IPR021364 Protein of unknown function DUF2857 YPO1904 IPR010260 Bacteriophage P4, Orf88 YPO1906 IPR000531 TonB-dependent receptor, beta-barrel YPO1906 IPR010105 TonB-dependent siderophore receptor YPO1906 IPR012910 TonB-dependent receptor, plug YPO1907 IPR000873 AMP-dependent synthetase/ligase YPO1907 IPR020845 AMP-binding, conserved site YPO1907 IPR025110 AMP-binding enzyme C-terminal domain YPO1908 IPR001031 Thioesterase YPO1908 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS YPO1908 IPR029058 Alpha/Beta hydrolase fold YPO1909 IPR000683 Oxidoreductase, N-terminal YPO1909 IPR010091 Thiazolinyl imide reductase YPO1909 IPR016040 NAD(P)-binding domain YPO1910 IPR001031 Thioesterase YPO1910 IPR001227 Acyl transferase domain YPO1910 IPR001242 Condensation domain YPO1910 IPR006162 Phosphopantetheine attachment site YPO1910 IPR009081 Acyl carrier protein-like YPO1910 IPR013217 Methyltransferase type 12 YPO1910 IPR013624 Non-ribosomal peptide synthetase YPO1910 IPR013968 Polyketide synthase, KR YPO1910 IPR014030 Beta-ketoacyl synthase, N-terminal YPO1910 IPR014031 Beta-ketoacyl synthase, C-terminal YPO1910 IPR014043 Acyl transferase YPO1910 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase YPO1910 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding YPO1910 IPR016039 Thiolase-like YPO1910 IPR016040 NAD(P)-binding domain YPO1910 IPR018201 Beta-ketoacyl synthase, active site YPO1910 IPR020801 Polyketide synthase, acyl transferase domain YPO1910 IPR020802 Polyketide synthase, thioesterase domain YPO1910 IPR020806 Polyketide synthase, phosphopantetheine-binding domain YPO1910 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPO1910 IPR029058 Alpha/Beta hydrolase fold YPO1910 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPO1910 IPR032821 YPO1910 YPO1911 IPR000873 AMP-dependent synthetase/ligase YPO1911 IPR001242 Condensation domain YPO1911 IPR006162 Phosphopantetheine attachment site YPO1911 IPR009081 Acyl carrier protein-like YPO1911 IPR010071 Amino acid adenylation domain YPO1911 IPR013217 Methyltransferase type 12 YPO1911 IPR013624 Non-ribosomal peptide synthetase YPO1911 IPR020806 Polyketide synthase, phosphopantetheine-binding domain YPO1911 IPR020845 AMP-binding, conserved site YPO1911 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPO1912 IPR009057 Homeodomain-like YPO1912 IPR018060 DNA binding HTH domain, AraC-type YPO1912 IPR018062 HTH domain AraC-type, conserved site YPO1912 IPR020449 Transcription regulator HTH, AraC- type YPO1913 IPR003439 ABC transporter-like YPO1913 IPR003593 AAA+ ATPase domain YPO1913 IPR011527 ABC transporter type 1, transmembrane domain YPO1913 IPR017871 ABC transporter, conserved site YPO1913 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1914 IPR003439 ABC transporter-like YPO1914 IPR003593 AAA+ ATPase domain YPO1914 IPR011527 ABC transporter type 1, transmembrane domain YPO1914 IPR017871 ABC transporter, conserved site YPO1914 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1915 IPR011701 Major facilitator superfamily YPO1915 IPR020846 Major facilitator superfamily domain YPO1916 IPR005801 ADC synthase YPO1916 IPR015890 Chorismate binding, C-terminal YPO1916 IPR019996 Salicylate synthase YPO1917 IPR002104 Integrase, catalytic YPO1917 IPR004107 Integrase, SAM-like, N-terminal YPO1917 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPO1917 IPR013762 Integrase-like, catalytic core YPO1917 IPR023109 Integrase/recombinase, N-terminal YPO1917 IPR025166 Domain of unknown function DUF4102 YPO1918 IPR001829 Pili assembly chaperone, bacterial YPO1918 IPR008962 PapD-like YPO1918 IPR016147 PapD, N-terminal, bacterial YPO1918 IPR016148 Pili assembly chaperone, C-terminal domain YPO1918 IPR018046 Pili assembly chaperone, conserved site YPO1919 IPR000259 Fimbrial-type adhesion domain YPO1919 IPR008966 Adhesion domain YPO1919 IPR011228 Uncharacterised conserved protein UCP029766 YPO1920 IPR000015 Outer membrane usher protein YPO1920 IPR025885 PapC, N-terminal domain YPO1920 IPR025949 PapC-like, C-terminal domain YPO1921 IPR001829 Pili assembly chaperone, bacterial YPO1921 IPR008962 PapD-like YPO1921 IPR016147 PapD, N-terminal, bacterial YPO1921 IPR016148 Pili assembly chaperone, C-terminal domain YPO1922 IPR000259 Fimbrial-type adhesion domain YPO1922 IPR008966 Adhesion domain YPO1925 IPR000792 Transcription regulator LuxR, C-terminal YPO1925 IPR001789 Signal transduction response regulator, receiver domain YPO1925 IPR011006 CheY-like superfamily YPO1925 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1925 IPR016032 Signal transduction response regulator, C-terminal effector YPO1926 IPR003702 Acetyl-CoA hydrolase/transferase YPO1926 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain YPO1927 IPR002539 MaoC-like domain YPO1927 IPR029069 HotDog domain YPO1928 IPR005000 HpcH/HpaI aldolase/citrate lyase domain YPO1928 IPR011206 Citrate lyase beta subunit-like YPO1928 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain YPO1929 IPR000847 Transcription regulator HTH, LysR YPO1929 IPR005119 LysR, substrate-binding YPO1929 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1930 IPR013783 Immunoglobulin-like fold YPO1932 IPR005829 Sugar transporter, conserved site YPO1932 IPR011701 Major facilitator superfamily YPO1932 IPR020846 Major facilitator superfamily domain YPO1933 IPR006680 Amidohydrolase 1 YPO1933 IPR032466 YPO1933 YPO1934 IPR000847 Transcription regulator HTH, LysR YPO1934 IPR005119 LysR, substrate-binding YPO1934 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1935 IPR003667 Electron transport complex, Rnf/Nqr YPO1935 IPR010967 NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit YPO1936 IPR004839 Aminotransferase, class I/classII YPO1936 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPO1936 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPO1936 IPR015424 Pyridoxal phosphate-dependent transferase YPO1937 IPR002293 Amino acid/polyamine transporter I YPO1937 IPR004840 Amino acid permease, conserved site YPO1937 IPR004841 Amino acid permease/ SLC12A domain YPO1938 IPR001034 HTH DeoR N-terminal domain YPO1938 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1938 IPR014036 DeoR C-terminal sensor domain YPO1938 IPR018356 Transcription regulator, HTH DeoR-type, conserved site YPO1939 IPR012338 Beta-lactamase/transpeptidase-like YPO1939 IPR015868 Glutaminase YPO1940 IPR011701 Major facilitator superfamily YPO1940 IPR020846 Major facilitator superfamily domain YPO1941 IPR004923 Iron permease FTR1/Fip1/EfeU YPO1942 IPR018470 Periplasmic metal-binding protein Tp34-type YPO1943 IPR007029 YHS domain YPO1943 IPR018758 Domain of unknown function DUF2318, membrane YPO1944 IPR003838 Permease FtsX-like YPO1945 IPR003838 Permease FtsX-like YPO1945 IPR025857 MacB-like periplasmic core domain YPO1946 IPR003439 ABC transporter-like YPO1946 IPR003593 AAA+ ATPase domain YPO1946 IPR017871 ABC transporter, conserved site YPO1946 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1947 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant YPO1947 IPR012336 Thioredoxin-like fold YPO1948 IPR009056 Cytochrome c-like domain YPO1949 IPR004537 Tellurite resistance methyltransferase, TehB YPO1949 IPR014431 Tellurite resistance methyltransferase, TehB type-2 YPO1949 IPR014710 RmlC-like jelly roll fold YPO1949 IPR015392 Domain of unknown function DUF1971 YPO1949 IPR015985 Tellurite resistance methyltransferase TehB-like domain YPO1949 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPO1950 IPR000587 Creatinase, N-terminal YPO1950 IPR000994 Peptidase M24, structural domain YPO1950 IPR028980 Creatinase/Aminopeptidase P, N-terminal YPO1950 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal YPO1951 IPR011990 Tetratricopeptide-like helical domain YPO1951 IPR023870 Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA YPO1952 IPR002509 Polysaccharide deacetylase YPO1952 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YPO1952 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB YPO1952 IPR032772 YPO1952 YPO1953 IPR001173 Glycosyltransferase 2-like YPO1953 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA YPO1953 IPR029044 Nucleotide-diphospho-sugar transferases YPO1954 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD YPO1955 IPR000182 GNAT domain YPO1955 IPR016181 Acyl-CoA N-acyltransferase YPO1957 IPR003714 PhoH-like protein YPO1957 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1958 IPR004713 Calcium/proton exchanger YPO1958 IPR004837 Sodium/calcium exchanger membrane region YPO1959 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO1959 IPR003660 HAMP linker domain YPO1959 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain YPO1959 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing YPO1959 IPR029095 NarX-like, N-terminal YPO1960 IPR000524 Transcription regulator HTH, GntR YPO1960 IPR004839 Aminotransferase, class I/classII YPO1960 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1960 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPO1960 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPO1960 IPR015424 Pyridoxal phosphate-dependent transferase YPO1962 IPR004636 Acetylornithine/Succinylornithine transaminase family YPO1962 IPR005814 Aminotransferase class-III YPO1962 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPO1962 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPO1962 IPR015424 Pyridoxal phosphate-dependent transferase YPO1962 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria YPO1962 IPR026330 Succinylornithine transaminase YPO1963 IPR007041 Arginine N-succinyltransferase Ast/AOST YPO1963 IPR016181 Acyl-CoA N-acyltransferase YPO1963 IPR017650 Arginine N-succinyltransferase AstA YPO1964 IPR015590 Aldehyde dehydrogenase domain YPO1964 IPR016160 Aldehyde dehydrogenase, cysteine active site YPO1964 IPR016161 Aldehyde/histidinol dehydrogenase YPO1964 IPR016162 Aldehyde dehydrogenase, N-terminal YPO1964 IPR016163 Aldehyde dehydrogenase, C-terminal YPO1964 IPR017649 Succinylglutamic semialdehyde dehydrogenase YPO1964 IPR029510 Aldehyde dehydrogenase, glutamic acid active site YPO1965 IPR007079 Succinylarginine dihydrolase YPO1966 IPR007036 Succinylglutamate desuccinylase/aspartoacylase YPO1966 IPR016681 Succinylglutamate desuccinylase YPO1968 IPR001584 Integrase, catalytic core YPO1968 IPR006120 Resolvase, HTH domain YPO1968 IPR009057 Homeodomain-like YPO1968 IPR012337 Ribonuclease H-like domain YPO1969 IPR001270 ClpA/B family YPO1969 IPR002611 IstB-like ATP-binding protein YPO1969 IPR003593 AAA+ ATPase domain YPO1969 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO1969 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO1971 IPR002508 Cell wall hydrolase/autolysin, catalytic YPO1971 IPR007709 N-formylglutamate amidohydrolase YPO1971 IPR010247 N-formylglutamate deformylase YPO1972 IPR005920 Imidazolonepropionase YPO1972 IPR006680 Amidohydrolase 1 YPO1972 IPR011059 Metal-dependent hydrolase, composite domain YPO1972 IPR032466 YPO1972 YPO1973 IPR000524 Transcription regulator HTH, GntR YPO1973 IPR010248 Histidine utilization repressor YPO1973 IPR011663 UbiC transcription regulator-associated YPO1973 IPR011991 Winged helix-turn-helix DNA-binding domain YPO1973 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain YPO1974 IPR006680 Amidohydrolase 1 YPO1974 IPR010252 Formiminoglutamate deiminase YPO1974 IPR011059 Metal-dependent hydrolase, composite domain YPO1974 IPR032466 YPO1974 YPO1975 IPR010282 Uncharacterised protein family HutD/Ves YPO1975 IPR011051 RmlC-like cupin domain YPO1975 IPR014710 RmlC-like jelly roll fold YPO1976 IPR005801 ADC synthase YPO1976 IPR015890 Chorismate binding, C-terminal YPO1979 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain YPO1979 IPR016040 NAD(P)-binding domain YPO1980 IPR001279 Beta-lactamase-like YPO1981 IPR012685 Conserved hypothetical protein CHP02304, F390 synthetase-related YPO1982 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain YPO1982 IPR016040 NAD(P)-binding domain YPO1983 IPR025993 Ceramide glucosyltransferase YPO1983 IPR029044 Nucleotide-diphospho-sugar transferases YPO1985 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase YPO1985 IPR007235 Glycosyl transferase, family 28, C-terminal YPO1988 IPR001207 Transposase, mutator type YPO1989 IPR006597 Sel1-like YPO1989 IPR011652 MORN variant YPO1989 IPR011990 Tetratricopeptide-like helical domain YPO1990 IPR006597 Sel1-like YPO1990 IPR011990 Tetratricopeptide-like helical domain YPO1990 IPR025115 Domain of unknown function DUF4034 YPO1991 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family YPO1991 IPR022133 Ribose-5-phosphate isomerase, C-terminal YPO1992 IPR013217 Methyltransferase type 12 YPO1992 IPR016584 S-adenosyl-L-methionine dependent methyltransferase, YbcY, predicted YPO1992 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPO1993 IPR002347 Glucose/ribitol dehydrogenase YPO1993 IPR016040 NAD(P)-binding domain YPO1993 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPO1994 IPR011051 RmlC-like cupin domain YPO1995 IPR011051 RmlC-like cupin domain YPO1996 IPR011989 Armadillo-like helical YPO1996 IPR016024 Armadillo-type fold YPO1997 IPR000073 Alpha/beta hydrolase fold-1 YPO1997 IPR029058 Alpha/Beta hydrolase fold YPO1998 IPR011051 RmlC-like cupin domain YPO1998 IPR013096 Cupin 2, conserved barrel YPO1998 IPR014710 RmlC-like jelly roll fold YPO1999 IPR003779 Carboxymuconolactone decarboxylase-like YPO1999 IPR029032 AhpD-like YPO2000 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO2000 IPR003660 HAMP linker domain YPO2000 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPO2000 IPR006290 Heavy metal sensor kinase YPO2001 IPR001789 Signal transduction response regulator, receiver domain YPO2001 IPR001867 Signal transduction response regulator, C-terminal YPO2001 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response YPO2001 IPR011006 CheY-like superfamily YPO2001 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2001 IPR016032 Signal transduction response regulator, C-terminal effector YPO2002 IPR002925 Dienelactone hydrolase YPO2002 IPR029058 Alpha/Beta hydrolase fold YPO2003 IPR008254 Flavodoxin/nitric oxide synthase YPO2003 IPR029039 Flavoprotein-like YPO2004 IPR016174 Di-haem cytochrome, transmembrane YPO2004 IPR025517 Domain of unknown function DUF4405 YPO2005 IPR025145 Protein of unknown function DUF4087 YPO2007 IPR013094 Alpha/beta hydrolase fold-3 YPO2007 IPR029058 Alpha/Beta hydrolase fold YPO2008 IPR001763 Rhodanese-like domain YPO2009 IPR001584 Integrase, catalytic core YPO2009 IPR012337 Ribonuclease H-like domain YPO2010 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 YPO2010 IPR006073 GTP binding domain YPO2010 IPR012675 Beta-grasp domain YPO2010 IPR012676 TGS-like YPO2010 IPR013029 Domain of unknown function DUF933 YPO2010 IPR023192 TGS-like domain YPO2010 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2011 IPR001328 Peptidyl-tRNA hydrolase YPO2011 IPR018171 Peptidyl-tRNA hydrolase, conserved site YPO2012 IPR019698 Protein of unknown function DUF2583 YPO2013 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site YPO2013 IPR005946 Ribose-phosphate diphosphokinase YPO2013 IPR029057 Phosphoribosyltransferase-like YPO2013 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain YPO2014 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase YPO2014 IPR006204 GHMP kinase N-terminal domain YPO2014 IPR013750 GHMP kinase, C-terminal domain YPO2014 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPO2014 IPR020568 Ribosomal protein S5 domain 2-type fold YPO2015 IPR004565 Outer membrane lipoprotein LolB YPO2015 IPR029046 Lipoprotein localisation LolA/LolB/LppX YPO2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase YPO2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase YPO2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal YPO2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain YPO2016 IPR016040 NAD(P)-binding domain YPO2016 IPR018214 Glutamyl-tRNA reductase, conserved site YPO2017 IPR000352 Peptide chain release factor class I/class II YPO2017 IPR004373 Peptide chain release factor 1 YPO2017 IPR005139 Peptide chain release factor YPO2017 IPR014720 Double-stranded RNA-binding domain YPO2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPO2018 IPR004556 Modification methylase HemK YPO2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific YPO2018 IPR025714 Methyltransferase domain YPO2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPO2019 IPR007360 Invasion gene expression up-regulator, SirB YPO2020 IPR011990 Tetratricopeptide-like helical domain YPO2020 IPR032698 YPO2020 YPO2021 IPR006218 DAHP synthetase I/KDSA YPO2021 IPR006269 3-deoxy-8-phosphooctulonate synthase YPO2021 IPR013785 Aldolase-type TIM barrel YPO2023 IPR002686 Transposase IS200-like YPO2025 IPR001270 ClpA/B family YPO2025 IPR002611 IstB-like ATP-binding protein YPO2025 IPR003593 AAA+ ATPase domain YPO2025 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2025 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO2026 IPR001584 Integrase, catalytic core YPO2026 IPR006120 Resolvase, HTH domain YPO2026 IPR009057 Homeodomain-like YPO2026 IPR012337 Ribonuclease H-like domain YPO2028 IPR004129 Glycerophosphoryl diester phosphodiesterase YPO2028 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain YPO2028 IPR030395 YPO2028 YPO2030 IPR000515 MetI-like domain YPO2031 IPR000515 MetI-like domain YPO2033 IPR002686 Transposase IS200-like YPO2035 IPR004129 Glycerophosphoryl diester phosphodiesterase YPO2035 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain YPO2035 IPR030395 YPO2035 YPO2036 IPR000600 ROK YPO2036 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2037 IPR003141 Polymerase/histidinol phosphatase, N-terminal YPO2037 IPR004013 PHP, C-terminal YPO2037 IPR016195 Polymerase/histidinol phosphatase-like YPO2037 IPR023710 Probable phosphatase YcdX YPO2038 IPR020945 DMSO/Nitrate reductase chaperone YPO2038 IPR026269 Tat proofreading chaperone DmsD-type YPO2039 IPR010835 Protein of unknown function DUF1439 YPO2040 IPR011701 Major facilitator superfamily YPO2040 IPR020846 Major facilitator superfamily domain YPO2040 IPR022855 Multidrug resistance protein MdtH YPO2041 IPR000182 GNAT domain YPO2041 IPR016181 Acyl-CoA N-acyltransferase YPO2042 IPR000683 Oxidoreductase, N-terminal YPO2042 IPR007432 Protein of unknown function DUF480 YPO2042 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2042 IPR016040 NAD(P)-binding domain YPO2043 IPR004268 Flagellin assembly, membrane protein MviN YPO2044 IPR005565 Haemolysin activator HlyB YPO2044 IPR013686 Polypeptide-transport-associated, ShlB-type YPO2044 IPR027282 Two partner secretion pathway transporter YPO2045 IPR008638 Filamentous haemagglutinin, N-terminal YPO2045 IPR011050 Pectin lyase fold/virulence factor YPO2045 IPR012334 Pectin lyase fold YPO2045 IPR025157 Haemagluttinin repeat YPO2046 IPR001278 Arginine-tRNA ligase YPO2046 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPO2046 IPR005148 Arginyl tRNA synthetase N-terminal domain YPO2046 IPR008909 DALR anticodon binding YPO2046 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding YPO2046 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO2047 IPR010393 Protein of unknown function DUF991 YPO2047 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase YPO2048 IPR005627 Copper homeostasis protein CutC YPO2048 IPR023648 Copper homeostasis CutC domain YPO2049 IPR010017 tRNA (mo5U34)-methyltransferase YPO2049 IPR027555 tRNA (mo5U34)-methyltransferase-like YPO2049 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPO2050 IPR005271 tRNA (cmo5U34)-methyltransferase YPO2050 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPO2051 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein YPO2051 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain YPO2052 IPR002763 Protein of unknown function DUF72 YPO2053 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb YPO2053 IPR004115 GAD-like domain YPO2053 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) YPO2053 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type YPO2053 IPR004524 Aspartate-tRNA ligase, class IIb, bacterial/mitochondrial-type YPO2053 IPR012340 Nucleic acid-binding, OB-fold YPO2053 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like YPO2053 IPR029351 GAD domain YPO2054 IPR000086 NUDIX hydrolase domain YPO2054 IPR003564 dATP pyrophosphohydrolase YPO2054 IPR015797 NUDIX hydrolase domain-like YPO2054 IPR020084 NUDIX hydrolase, conserved site YPO2055 IPR002876 Transcriptional regulator TACO1-like YPO2055 IPR017856 Integrase, N-terminal zinc-binding domain-like YPO2055 IPR026563 Transcriptional regulator TACO1-like, domain 2 YPO2055 IPR026564 Transcriptional regulator TACO1-like, domain 3 YPO2055 IPR029072 YebC-like YPO2056 IPR002176 Crossover junction endodeoxyribonuclease RuvC YPO2056 IPR012337 Ribonuclease H-like domain YPO2056 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site YPO2057 IPR000085 Bacterial DNA recombination protein RuvA YPO2057 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 YPO2057 IPR010994 RuvA domain 2-like YPO2057 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal YPO2057 IPR012340 Nucleic acid-binding, OB-fold YPO2057 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial YPO2058 IPR003593 AAA+ ATPase domain YPO2058 IPR004605 DNA helicase, Holliday junction RuvB type YPO2058 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal YPO2058 IPR008824 DNA helicase, Holliday junction RuvB type, N-terminal YPO2058 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2058 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2059 IPR001626 ABC-3 YPO2059 IPR029022 ABC transporter, BtuC-like YPO2060 IPR003439 ABC transporter-like YPO2060 IPR003593 AAA+ ATPase domain YPO2060 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2061 IPR006127 Periplasmic solute binding protein family YPO2062 IPR007340 Opacity-associated protein A YPO2062 IPR011055 Duplicated hybrid motif YPO2062 IPR013731 Opacity-associated protein A, N-terminal YPO2062 IPR016047 Peptidase M23 YPO2062 IPR018392 LysM domain YPO2063 IPR004960 Bacterial lipid A biosynthesis acyltransferase YPO2063 IPR011921 Lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase YPO2064 IPR001697 Pyruvate kinase YPO2064 IPR011037 Pyruvate kinase-like, insert domain YPO2064 IPR015793 Pyruvate kinase, barrel YPO2064 IPR015794 Pyruvate kinase, alpha/beta YPO2064 IPR015795 Pyruvate kinase, C-terminal YPO2064 IPR015806 Pyruvate kinase, beta-barrel insert domain YPO2064 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain YPO2064 IPR018209 Pyruvate kinase, active site YPO2065 IPR000281 Helix-turn-helix protein RpiR YPO2065 IPR001347 Sugar isomerase (SIS) YPO2065 IPR009057 Homeodomain-like YPO2065 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2066 IPR001282 Glucose-6-phosphate dehydrogenase YPO2066 IPR016040 NAD(P)-binding domain YPO2066 IPR019796 Glucose-6-phosphate dehydrogenase, active site YPO2066 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding YPO2066 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal YPO2067 IPR000887 KDPG/KHG aldolase YPO2067 IPR013785 Aldolase-type TIM barrel YPO2067 IPR031337 YPO2067 YPO2067 IPR031338 YPO2067 YPO2068 IPR000390 Small multidrug resistance protein family YPO2068 IPR023740 Spermidine export protein MdtJ YPO2069 IPR000390 Small multidrug resistance protein family YPO2069 IPR023737 Spermidine export protein MdtI YPO2070 IPR006175 YjgF/Yer057p/UK114 family YPO2070 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like YPO2070 IPR019897 YjgF-like protein, conserved site YPO2071 IPR006555 ATP-dependent helicase, C-terminal YPO2071 IPR010614 DEAD2 YPO2071 IPR011545 DEAD/DEAH box helicase domain YPO2071 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YPO2071 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2072 IPR000905 Gcp-like domain YPO2072 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ YPO2073 IPR004658 Outer membrane lipoprotein Slp YPO2074 IPR000873 AMP-dependent synthetase/ligase YPO2074 IPR020845 AMP-binding, conserved site YPO2074 IPR025110 AMP-binding enzyme C-terminal domain YPO2075 IPR002121 HRDC domain YPO2075 IPR002562 3'-5' exonuclease domain YPO2075 IPR006292 Ribonuclease D YPO2075 IPR010997 HRDC-like YPO2075 IPR012337 Ribonuclease H-like domain YPO2076 IPR005527 Septum formation topological specificity factor MinE YPO2077 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain YPO2077 IPR010223 ATP binding protein MinD, bacterial-type YPO2077 IPR025501 ATP binding protein MinD YPO2077 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2078 IPR005526 Septum formation inhibitor MinC, C-terminal YPO2078 IPR007874 Septum formation inhibitor MinC, N-terminal YPO2078 IPR013033 Septum formation inhibitor MinC YPO2078 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal YPO2080 IPR027354 YcgL domain YPO2081 IPR011757 Lytic transglycosylase MltB YPO2081 IPR011970 Lytic murein transglycosylase YPO2081 IPR023346 Lysozyme-like domain YPO2081 IPR031304 YPO2081 YPO2082 IPR011234 Fumarylacetoacetase, C-terminal-related YPO2083 IPR005358 Putative zinc- or iron-chelating domain containing protein YPO2083 IPR008228 Uncharacterised conserved protein UCP006173 YPO2085 IPR001584 Integrase, catalytic core YPO2085 IPR006120 Resolvase, HTH domain YPO2085 IPR009057 Homeodomain-like YPO2085 IPR012337 Ribonuclease H-like domain YPO2086 IPR001270 ClpA/B family YPO2086 IPR002611 IstB-like ATP-binding protein YPO2086 IPR003593 AAA+ ATPase domain YPO2086 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2086 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO2087 IPR009634 Bacteriophage 933W, Xis excisionase YPO2088 IPR012327 D12 class N6 adenine-specific DNA methyltransferase YPO2088 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPO2089 IPR008711 Recombinase NinB YPO2090 IPR008713 Bacteriophage lambda NinG YPO2091 IPR010534 Bacteriophage 933W, GpQ YPO2093 IPR003497 BRO N-terminal domain YPO2098 IPR002196 Glycoside hydrolase, family 24 YPO2098 IPR023346 Lysozyme-like domain YPO2098 IPR023347 Lysozyme domain YPO2099 IPR004929 Bacteriophage Rz lysis protein YPO2100 IPR005039 Antirepressor protein, C-terminal YPO2102 IPR018738 Protein of unknown function DUF2280 YPO2104 IPR001207 Transposase, mutator type YPO2108 IPR017029 Putative phage head morphogenesis protein YPO2110 IPR003343 Bacterial Ig-like, group 2 YPO2110 IPR008964 Invasin/intimin cell-adhesion YPO2115 IPR025395 Protein of unknown function DUF4128 YPO2116 IPR003343 Bacterial Ig-like, group 2 YPO2116 IPR008964 Invasin/intimin cell-adhesion YPO2116 IPR014918 Bacteriophage T1, Orf41 YPO2117 IPR014859 Protein of unknown function DUF1789 YPO2118 IPR014915 Bacteriophage TLS, TfmB YPO2119 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal YPO2119 IPR009628 Bacteriophage lambda, GpH, tail tape measure, N-terminal YPO2120 IPR010265 Bacteriophage lambda, GpM, minor tail YPO2121 IPR002686 Transposase IS200-like YPO2122 IPR006487 Bacteriophage lambda, GpL, minor tail YPO2123 IPR000064 Endopeptidase, NLPC/P60 domain YPO2123 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain YPO2123 IPR028090 JAB domain, prokaryotic YPO2126 IPR003497 BRO N-terminal domain YPO2129 IPR010654 Bacteriophage lambda tail assembly I YPO2131 IPR003961 Fibronectin, type III YPO2131 IPR013783 Immunoglobulin-like fold YPO2131 IPR015406 Domain of unknown function DUF1983 YPO2131 IPR032876 YPO2131 YPO2133 IPR029056 Ribokinase-like YPO2134 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly YPO2136 IPR001207 Transposase, mutator type YPO2137 IPR011701 Major facilitator superfamily YPO2137 IPR020846 Major facilitator superfamily domain YPO2138 IPR000192 Aminotransferase class V domain YPO2138 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPO2138 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPO2138 IPR015424 Pyridoxal phosphate-dependent transferase YPO2138 IPR016454 Cysteine desulfurase, NifS YPO2141 IPR003752 Disulphide bond formation protein DsbB/BdbC YPO2141 IPR022920 Disulphide bond formation protein DsbB YPO2141 IPR023380 Disulphide bond formation protein DsbB-like domain YPO2142 IPR004671 Na+/H+ antiporter NhaB YPO2144 IPR000524 Transcription regulator HTH, GntR YPO2144 IPR008920 Transcription regulator FadR/GntR, C-terminal YPO2144 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2144 IPR014178 Fatty acid response transcription factor FadR YPO2144 IPR028374 FadR, C-terminal domain YPO2145 IPR007390 Sporulation stage V, protein R YPO2147 IPR006076 FAD dependent oxidoreductase YPO2147 IPR023080 D-amino acid dehydrogenase small subunit, DadA YPO2147 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPO2148 IPR001958 Tetracycline resistance protein, TetA/multidrug resistance protein MdtG YPO2148 IPR004812 Drug resistance transporter Bcr/CmlA subfamily YPO2148 IPR005829 Sugar transporter, conserved site YPO2148 IPR011701 Major facilitator superfamily YPO2148 IPR020846 Major facilitator superfamily domain YPO2149 IPR003829 Pirin, N-terminal domain YPO2149 IPR008778 Pirin, C-terminal domain YPO2149 IPR011051 RmlC-like cupin domain YPO2149 IPR012093 Pirin YPO2149 IPR014710 RmlC-like jelly roll fold YPO2150 IPR000847 Transcription regulator HTH, LysR YPO2150 IPR005119 LysR, substrate-binding YPO2150 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2151 IPR000620 Drug/metabolite transporter YPO2152 IPR006698 Thermus phage phiYS40, Orf56 YPO2153 IPR010650 PrkA C-terminal domain YPO2153 IPR013153 PrkA AAA domain YPO2153 IPR016230 Serine-protein kinase, PrkA YPO2153 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2155 IPR010583 MltA-interacting MipA YPO2155 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel YPO2156 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase YPO2156 IPR011013 Galactose mutarotase-like domain YPO2156 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup YPO2156 IPR025532 Glucose-6-phosphate 1-epimerase YPO2157 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I YPO2157 IPR016040 NAD(P)-binding domain YPO2157 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain YPO2157 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain YPO2157 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site YPO2157 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family YPO2158 IPR002579 Peptide methionine sulphoxide reductase MrsB YPO2158 IPR011057 Mss4-like YPO2158 IPR028427 Peptide methionine sulfoxide reductase YPO2159 IPR009749 Protein of unknown function DUF1315 YPO2160 IPR000868 Isochorismatase-like YPO2161 IPR006033 L-asparaginase, type I YPO2161 IPR006034 Asparaginase/glutaminase YPO2161 IPR020827 Asparaginase/glutaminase, active site 1 YPO2161 IPR027473 L-asparaginase, C-terminal domain YPO2161 IPR027474 L-asparaginase, N-terminal YPO2161 IPR027475 Asparaginase/glutaminase, active site 2 YPO2162 IPR002142 Peptidase S49 YPO2162 IPR004634 Peptidase S49, protease IV YPO2162 IPR004635 Peptidase S49, SppA YPO2162 IPR029045 ClpP/crotonase-like domain YPO2163 IPR000415 Nitroreductase-like YPO2163 IPR026021 Putative NAD(P)H nitroreductase YdjA-like YPO2163 IPR029479 Nitroreductase YPO2164 IPR004536 Selenide water dikinase YPO2164 IPR010918 AIR synthase-related protein, C-terminal domain YPO2164 IPR016188 PurM, N-terminal-like YPO2164 IPR023061 Selenide, water dikinase, class I YPO2165 IPR000380 DNA topoisomerase, type IA YPO2165 IPR003601 DNA topoisomerase, type IA, domain 2 YPO2165 IPR003602 DNA topoisomerase, type IA, DNA-binding domain YPO2165 IPR005738 DNA topoisomerase III YPO2165 IPR006171 Toprim domain YPO2165 IPR013497 DNA topoisomerase, type IA, central YPO2165 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 YPO2165 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 YPO2165 IPR023405 DNA topoisomerase, type IA, core domain YPO2165 IPR023406 DNA topoisomerase, type IA, active site YPO2166 IPR009971 Protein of unknown function DUF1496 YPO2167 IPR000086 NUDIX hydrolase domain YPO2167 IPR015797 NUDIX hydrolase domain-like YPO2167 IPR020084 NUDIX hydrolase, conserved site YPO2167 IPR020476 NUDIX hydrolase YPO2168 IPR004808 AP endonuclease 1 YPO2168 IPR005135 Endonuclease/exonuclease/phosphatase YPO2168 IPR020847 AP endonuclease 1, binding site YPO2168 IPR020848 AP endonuclease 1, conserved site YPO2169 IPR000847 Transcription regulator HTH, LysR YPO2169 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2170 IPR001207 Transposase, mutator type YPO2171 IPR002376 Formyl transferase, N-terminal YPO2171 IPR002912 ACT domain YPO2171 IPR004810 Formyltetrahydrofolate deformylase YPO2172 IPR004027 SEC-C motif YPO2172 IPR023006 Uncharacterised protein family UPF0225 YPO2172 IPR032710 YPO2172 YPO2173 IPR001789 Signal transduction response regulator, receiver domain YPO2173 IPR011006 CheY-like superfamily YPO2173 IPR028616 Regulator of RpoS YPO2174 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal YPO2174 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YPO2174 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation YPO2174 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal YPO2174 IPR016040 NAD(P)-binding domain YPO2174 IPR017476 UDP-glucose/GDP-mannose dehydrogenase YPO2174 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type YPO2175 IPR001801 Histone-like protein H-NS YPO2175 IPR027444 Histone-like protein H-NS, C-terminal domain YPO2175 IPR027454 Histone-like protein H-NS family, oligomerisation domain YPO2176 IPR001267 Thymidine kinase YPO2176 IPR020633 Thymidine kinase, conserved site YPO2176 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2177 IPR001270 ClpA/B family YPO2177 IPR002611 IstB-like ATP-binding protein YPO2177 IPR003593 AAA+ ATPase domain YPO2177 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2177 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO2178 IPR001584 Integrase, catalytic core YPO2178 IPR006120 Resolvase, HTH domain YPO2178 IPR009057 Homeodomain-like YPO2178 IPR012337 Ribonuclease H-like domain YPO2180 IPR001670 Alcohol dehydrogenase, iron-type YPO2180 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase YPO2180 IPR015590 Aldehyde dehydrogenase domain YPO2180 IPR016161 Aldehyde/histidinol dehydrogenase YPO2180 IPR016162 Aldehyde dehydrogenase, N-terminal YPO2180 IPR016163 Aldehyde dehydrogenase, C-terminal YPO2180 IPR018211 Alcohol dehydrogenase, iron-type, conserved site YPO2181 IPR002771 Multiple antibiotic resistance (MarC)-related YPO2182 IPR000914 Bacterial extracellular solute-binding protein, family 5 YPO2182 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site YPO2182 IPR030678 YPO2182 YPO2183 IPR000515 MetI-like domain YPO2184 IPR000515 MetI-like domain YPO2184 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YPO2185 IPR003439 ABC transporter-like YPO2185 IPR003593 AAA+ ATPase domain YPO2185 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YPO2185 IPR017871 ABC transporter, conserved site YPO2185 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2186 IPR003439 ABC transporter-like YPO2186 IPR003593 AAA+ ATPase domain YPO2186 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YPO2186 IPR017871 ABC transporter, conserved site YPO2186 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2187 IPR007376 dsDNA mimic, putative YPO2188 IPR001736 Phospholipase D/Transphosphatidylase YPO2188 IPR022924 Cardiolipin synthase YPO2188 IPR025202 Phospholipase D-like domain YPO2188 IPR027379 Cardiolipin synthase N-terminal YPO2188 IPR030840 YPO2188 YPO2190 IPR000758 Virulence-related outer membrane protein YPO2190 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel YPO2190 IPR027385 Outer membrane protein beta-barrel YPO2192 IPR005545 YCII-related YPO2192 IPR011008 Dimeric alpha-beta barrel YPO2193 IPR003538 Gram-negative bacterial TonB protein YPO2193 IPR006260 TonB, C-terminal YPO2194 IPR001207 Transposase, mutator type YPO2195 IPR006683 Thioesterase superfamily YPO2195 IPR029069 HotDog domain YPO2196 IPR006008 Intracellular septation protein A YPO2199 IPR009627 Uncharacterised protein family UPF0259 YPO2201 IPR000758 Virulence-related outer membrane protein YPO2201 IPR005618 Outer membrane protein, OmpW YPO2201 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel YPO2202 IPR007055 BON domain YPO2202 IPR014004 Transport-associated and nodulation domain, bacteria YPO2203 IPR002028 Tryptophan synthase, alpha chain YPO2203 IPR011060 Ribulose-phosphate binding barrel YPO2203 IPR013785 Aldolase-type TIM barrel YPO2203 IPR018204 Tryptophan synthase, alpha chain, active site YPO2204 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPO2204 IPR006653 Tryptophan synthase, beta chain, conserved site YPO2204 IPR006654 Tryptophan synthase, beta chain YPO2204 IPR023026 Tryptophan synthase beta chain/beta chain-like YPO2205 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) like domain YPO2205 IPR001468 Indole-3-glycerol phosphate synthase, conserved site YPO2205 IPR011060 Ribulose-phosphate binding barrel YPO2205 IPR013785 Aldolase-type TIM barrel YPO2205 IPR013798 Indole-3-glycerol phosphate synthase YPO2206 IPR000312 Glycosyl transferase, family 3 YPO2206 IPR005940 Anthranilate phosphoribosyl transferase YPO2206 IPR017459 Glycosyl transferase family 3, N-terminal domain YPO2207 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain YPO2207 IPR017926 Glutamine amidotransferase YPO2207 IPR029062 Class I glutamine amidotransferase-like YPO2208 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial YPO2208 IPR005801 ADC synthase YPO2208 IPR006805 Anthranilate synthase component I, N-terminal YPO2208 IPR015890 Chorismate binding, C-terminal YPO2208 IPR019999 Anthranilate synthase component I - like YPO2209 IPR013205 Leader peptide, tryptophan-operon YPO2211 IPR003141 Polymerase/histidinol phosphatase, N-terminal YPO2211 IPR004013 PHP, C-terminal YPO2211 IPR016195 Polymerase/histidinol phosphatase-like YPO2212 IPR006070 YrdC-like domain YPO2212 IPR017945 DHBP synthase RibB-like alpha/beta domain YPO2213 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F YPO2213 IPR002942 RNA-binding S4 domain YPO2213 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F YPO2213 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site YPO2213 IPR020103 Pseudouridine synthase, catalytic domain YPO2214 IPR003724 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR YPO2214 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain YPO2214 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2215 IPR002347 Glucose/ribitol dehydrogenase YPO2215 IPR016040 NAD(P)-binding domain YPO2215 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPO2216 IPR002142 Peptidase S49 YPO2216 IPR013703 Peptidase S49, N-terminal proteobacteria YPO2216 IPR029045 ClpP/crotonase-like domain YPO2217 IPR019633 Protein of unknown function DUF2498 YPO2218 IPR000380 DNA topoisomerase, type IA YPO2218 IPR003601 DNA topoisomerase, type IA, domain 2 YPO2218 IPR003602 DNA topoisomerase, type IA, DNA-binding domain YPO2218 IPR005733 DNA topoisomerase I, bacterial-type YPO2218 IPR006171 Toprim domain YPO2218 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type YPO2218 IPR013497 DNA topoisomerase, type IA, central YPO2218 IPR013498 DNA topoisomerase, type IA, zn finger YPO2218 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 YPO2218 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 YPO2218 IPR023405 DNA topoisomerase, type IA, core domain YPO2218 IPR023406 DNA topoisomerase, type IA, active site YPO2218 IPR028612 DNA topoisomerase I, type IA YPO2219 IPR000847 Transcription regulator HTH, LysR YPO2219 IPR005119 LysR, substrate-binding YPO2219 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2221 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel YPO2221 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha YPO2221 IPR006249 Aconitate/iron regulatory protein 2 YPO2221 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YPO2221 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 YPO2221 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 YPO2221 IPR015937 Aconitase/isopropylmalate dehydratase YPO2221 IPR018136 Aconitase family, 4Fe-4S cluster binding site YPO2222 IPR000926 GTP cyclohydrolase II, RibA YPO2222 IPR032677 YPO2222 YPO2223 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase YPO2224 IPR010445 Protein of unknown function DUF1049 YPO2224 IPR032906 YPO2224 YPO2225 IPR011990 Tetratricopeptide-like helical domain YPO2225 IPR019734 Tetratricopeptide repeat YPO2225 IPR030865 YPO2225 YPO2226 IPR010985 Ribbon-helix-helix YPO2226 IPR013321 Arc-type ribbon-helix-helix YPO2227 IPR001754 Orotidine 5'-phosphate decarboxylase domain YPO2227 IPR011060 Ribulose-phosphate binding barrel YPO2227 IPR013785 Aldolase-type TIM barrel YPO2227 IPR014732 Orotidine 5'-phosphate decarboxylase YPO2227 IPR018089 Orotidine 5'-phosphate decarboxylase, active site YPO2228 IPR001950 Translation initiation factor SUI1 YPO2228 IPR005872 Archaeal/bacterial translation initiation factor SUI1 YPO2229 IPR008816 Glycine zipper 2TM domain YPO2230 IPR001303 Class II aldolase/adducin N-terminal YPO2230 IPR004661 L-ribulose-5-phosphate 4-epimerase YPO2231 IPR018680 Protein of unknown function DUF2164 YPO2232 IPR001585 Transaldolase YPO2232 IPR004731 Transaldolase 3A/3B YPO2232 IPR013785 Aldolase-type TIM barrel YPO2232 IPR018225 Transaldolase, active site YPO2233 IPR007423 Protein of unknown function DUF466 YPO2234 IPR003706 Carbon starvation protein CstA YPO2234 IPR025299 CstA C-terminal domain YPO2235 IPR003029 Ribosomal protein S1, RNA-binding domain YPO2235 IPR004476 Ribonuclease II/ribonuclease R YPO2235 IPR011129 Cold shock protein YPO2235 IPR011804 Ribonuclease II YPO2235 IPR012340 Nucleic acid-binding, OB-fold YPO2235 IPR013223 Ribonuclease B, N-terminal OB domain YPO2235 IPR022966 Ribonuclease II/R, conserved site YPO2237 IPR011701 Major facilitator superfamily YPO2237 IPR020846 Major facilitator superfamily domain YPO2238 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain YPO2238 IPR016040 NAD(P)-binding domain YPO2239 IPR000445 Helix-hairpin-helix motif YPO2239 IPR003265 HhH-GPD domain YPO2239 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif YPO2239 IPR004035 Endonuclease III, iron-sulphur binding site YPO2239 IPR004036 Endonuclease III-like, conserved site-2 YPO2239 IPR005759 Endonuclease III YPO2239 IPR011257 DNA glycosylase YPO2239 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal YPO2240 IPR003667 Electron transport complex, Rnf/Nqr YPO2240 IPR010968 Electron transport complex, RnfE YPO2241 IPR007329 FMN-binding YPO2241 IPR010209 Electron transport complex, RnfG YPO2242 IPR004338 NADH-quinone reductase NQR2/RnfD YPO2242 IPR011303 Electron transport complex, RnfD YPO2243 IPR009057 Homeodomain-like YPO2243 IPR011256 Regulatory factor, effector binding domain YPO2243 IPR018060 DNA binding HTH domain, AraC-type YPO2243 IPR020449 Transcription regulator HTH, AraC- type YPO2243 IPR029442 GyrI-like small molecule binding domain YPO2244 IPR009051 Alpha-helical ferredoxin YPO2244 IPR010208 Electron transport complex protein RnfC YPO2244 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit YPO2244 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPO2244 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO2244 IPR019554 Soluble ligand binding domain YPO2244 IPR026902 RnfC Barrel sandwich hybrid domain YPO2245 IPR007202 4Fe-4S domain YPO2245 IPR010207 Electron transport complex, RnfB YPO2245 IPR016463 Electron transport complex, RnfB, Proteobacteria YPO2245 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO2246 IPR003667 Electron transport complex, Rnf/Nqr YPO2246 IPR011293 Electron transport complex, RnfA YPO2247 IPR019690 Protein of unknown function DUF2569 YPO2252 IPR003439 ABC transporter-like YPO2252 IPR003593 AAA+ ATPase domain YPO2252 IPR005074 Peptidase C39, bacteriocin processing YPO2252 IPR010132 ATPase, type I secretion system, HlyB YPO2252 IPR011527 ABC transporter type 1, transmembrane domain YPO2252 IPR017871 ABC transporter, conserved site YPO2252 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2253 IPR003762 L-arabinose isomerase YPO2253 IPR004216 L-fucose/L-arabinose isomerase, C-terminal YPO2253 IPR009015 L-fucose isomerase, N-terminal/central domain YPO2253 IPR024664 L-arabinose isomerase, C-terminal YPO2254 IPR005929 L-ribulokinase YPO2254 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPO2254 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPO2255 IPR001761 Periplasmic binding protein/LacI sugar binding domain YPO2255 IPR026266 L-arabinose-binding periplasmic protein YPO2255 IPR028082 Periplasmic binding protein-like I YPO2256 IPR003439 ABC transporter-like YPO2256 IPR003593 AAA+ ATPase domain YPO2256 IPR017871 ABC transporter, conserved site YPO2256 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2257 IPR001851 ABC transporter, permease YPO2258 IPR003313 AraC-type arabinose-binding/dimerisation domain YPO2258 IPR009057 Homeodomain-like YPO2258 IPR018060 DNA binding HTH domain, AraC-type YPO2258 IPR018062 HTH domain AraC-type, conserved site YPO2258 IPR020449 Transcription regulator HTH, AraC- type YPO2259 IPR000683 Oxidoreductase, N-terminal YPO2259 IPR004104 Oxidoreductase, C-terminal YPO2259 IPR016040 NAD(P)-binding domain YPO2260 IPR016833 Putative sodium bile acid cotransporter YPO2262 IPR010352 Protein of unknown function DUF945 YPO2263 IPR001250 Mannose-6-phosphate isomerase, type I YPO2263 IPR011051 RmlC-like cupin domain YPO2263 IPR014710 RmlC-like jelly roll fold YPO2263 IPR016305 Mannose-6-phosphate isomerase YPO2263 IPR018050 Phosphomannose isomerase, type I, conserved site YPO2263a IPR000362 Fumarate lyase family YPO2263a IPR005677 Fumarate hydratase, class II YPO2263a IPR008948 L-Aspartase-like YPO2263a IPR018951 Fumarase C, C-terminal YPO2263a IPR020557 Fumarate lyase, conserved site YPO2263a IPR022761 Fumarate lyase, N-terminal YPO2263a IPR024083 Fumarase/histidase, N-terminal YPO2265 IPR008865 DNA replication terminus site-binding protein YPO2266 IPR005829 Sugar transporter, conserved site YPO2266 IPR011701 Major facilitator superfamily YPO2266 IPR020846 Major facilitator superfamily domain YPO2268 IPR000600 ROK YPO2268 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2269 IPR004472 Dethiobiotin synthase BioD YPO2269 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2270 IPR001807 Chloride channel, voltage gated YPO2270 IPR014743 Chloride channel, core YPO2270 IPR023790 Chloride channel, voltage-gated, ClcB YPO2273 IPR001387 Cro/C1-type helix-turn-helix domain YPO2273 IPR010982 Lambda repressor-like, DNA-binding domain YPO2274 IPR006516 Bacteriophage/plasmid replication protein, gene II/X YPO2274 IPR022686 Bacteriophage/plasmid replication protein, gene II/X, N-terminal YPO2274 IPR022688 Bacteriophage/plasmid replication protein, gene II/X, C-terminal YPO2278 IPR019670 Protein of unkown function DUF2523 YPO2279 IPR008900 Zona occludens toxin YPO2279 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2280 IPR004846 Type II/III secretion system YPO2283 IPR000843 Transcription regulator HTH, LacI YPO2283 IPR010982 Lambda repressor-like, DNA-binding domain YPO2283 IPR028082 Periplasmic binding protein-like I YPO2287 IPR000515 MetI-like domain YPO2288 IPR000845 Nucleoside phosphorylase domain YPO2288 IPR011271 AMP nucleosidase YPO2288 IPR018017 Nucleoside phosphorylase YPO2288 IPR018953 AMP nucleoside phosphorylase, N-terminal YPO2290 IPR009216 Virulence factor SrfB YPO2291 IPR017030 Virulence effector, SrfC YPO2292 IPR010846 Protein of unknown function DUF1460 YPO2292 IPR023360 Putative xylanase-like C-terminal YPO2293 IPR000399 TPP-binding enzyme, conserved site YPO2293 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YPO2293 IPR012000 Thiamine pyrophosphate enzyme, central domain YPO2293 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain YPO2293 IPR012846 Acetolactate synthase, large subunit, biosynthetic YPO2293 IPR029035 DHS-like NAD/FAD-binding domain YPO2293 IPR029061 Thiamin diphosphate-binding fold YPO2295 IPR006439 HAD hydrolase, subfamily IA YPO2295 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB YPO2295 IPR023198 Phosphoglycolate phosphatase, domain 2 YPO2295 IPR023214 HAD-like domain YPO2298 IPR001952 Alkaline phosphatase YPO2298 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha YPO2298 IPR017850 Alkaline-phosphatase-like, core domain YPO2298 IPR018299 Alkaline phosphatase, active site YPO2299 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site YPO2299 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain YPO2299 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2299 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding YPO2299 IPR023546 Methylated-DNA--protein-cysteine methyltransferase YPO2300 IPR000595 Cyclic nucleotide-binding domain YPO2300 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2300 IPR012318 Helix-turn-helix motif, Crp-type YPO2300 IPR014710 RmlC-like jelly roll fold YPO2300 IPR018335 Transcription regulator HTH, Crp-type, conserved site YPO2300 IPR018490 Cyclic nucleotide-binding-like YPO2301 IPR006016 UspA YPO2301 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO2302 IPR012136 NADP transhydrogenase, beta subunit YPO2302 IPR029035 DHS-like NAD/FAD-binding domain YPO2303 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain YPO2303 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal YPO2303 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 YPO2303 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 YPO2303 IPR016040 NAD(P)-binding domain YPO2303 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal YPO2303 IPR026255 NAD(P) transhydrogenase, alpha subunit YPO2305 IPR010854 Domain of unknown function DUF1471 YPO2305 IPR025539 YdgH protein YPO2305 IPR025543 Dodecin-like YPO2306 IPR002293 Amino acid/polyamine transporter I YPO2306 IPR004754 Amino acid antiporter YPO2308 IPR001789 Signal transduction response regulator, receiver domain YPO2308 IPR001867 Signal transduction response regulator, C-terminal YPO2308 IPR011006 CheY-like superfamily YPO2308 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2308 IPR016032 Signal transduction response regulator, C-terminal effector YPO2309 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO2309 IPR003660 HAMP linker domain YPO2309 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPO2309 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPO2310 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase YPO2311 IPR002686 Transposase IS200-like YPO2312 IPR005165 Anthrax toxin, edema factor, central YPO2312 IPR022385 Rhs repeat-associated core YPO2315 IPR007372 Lipid/polyisoprenoid-binding, YceI-like YPO2315 IPR023480 Uncharacterised protein family UPF0312/YceI YPO2316 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase YPO2316 IPR016174 Di-haem cytochrome, transmembrane YPO2319 IPR001254 Peptidase S1 YPO2319 IPR001314 Peptidase S1A, chymotrypsin-type YPO2319 IPR009003 Trypsin-like cysteine/serine peptidase domain YPO2319 IPR018114 Peptidase S1, trypsin family, active site YPO2319 IPR033116 YPO2319 YPO2320 IPR001387 Cro/C1-type helix-turn-helix domain YPO2320 IPR010982 Lambda repressor-like, DNA-binding domain YPO2321 IPR009241 Addiction module killer protein YPO2322 IPR001650 Helicase, C-terminal YPO2322 IPR003593 AAA+ ATPase domain YPO2322 IPR007502 Helicase-associated domain YPO2322 IPR010222 RNA helicase, ATP-dependent DEAH box, HrpA-type YPO2322 IPR011545 DEAD/DEAH box helicase domain YPO2322 IPR011709 Domain of unknown function DUF1605 YPO2322 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YPO2322 IPR024590 RNA helicase, ATP-dependent DEAH box, HrpA, C-terminal YPO2322 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2323 IPR003680 Flavodoxin-like fold YPO2323 IPR023048 NADH-azoreductase, FMN-dependent YPO2323 IPR029039 Flavoprotein-like YPO2324 IPR007324 Sugar-binding domain, putative YPO2325 IPR000669 Mannitol dehydrogenase YPO2325 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YPO2325 IPR013118 Mannitol dehydrogenase, C-terminal YPO2325 IPR013131 Mannitol dehydrogenase, N-terminal YPO2325 IPR013328 Dehydrogenase, multihelical YPO2325 IPR016040 NAD(P)-binding domain YPO2326 IPR008309 Uncharacterised conserved protein UCP025560 YPO2327 IPR025985 YnbE-like lipoprotein YPO2328 IPR021730 Dicarboxylate transport YPO2329 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPO2329 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain YPO2329 IPR016040 NAD(P)-binding domain YPO2329 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YPO2329 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YPO2330 IPR005184 Domain of unknown function DUF306, Meta/HslJ YPO2331 IPR005590 Protein of unknown function DUF333 YPO2332 IPR003416 MgtC/SapB/SrpB transporter YPO2333 IPR000390 Small multidrug resistance protein family YPO2334 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain YPO2334 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal YPO2334 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II YPO2334 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YPO2334 IPR011895 Pyruvate-flavodoxin oxidoreductase YPO2334 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPO2334 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO2334 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain YPO2334 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain YPO2334 IPR029061 Thiamin diphosphate-binding fold YPO2334 IPR033412 YPO2334 YPO2335 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase YPO2335 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA YPO2335 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO2336 IPR013094 Alpha/beta hydrolase fold-3 YPO2336 IPR029058 Alpha/Beta hydrolase fold YPO2337 IPR000551 MerR-type HTH domain YPO2337 IPR009061 DNA binding domain, putative YPO2337 IPR011256 Regulatory factor, effector binding domain YPO2338 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB YPO2339 IPR000914 Bacterial extracellular solute-binding protein, family 5 YPO2339 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site YPO2339 IPR030678 YPO2339 YPO2340 IPR000834 Peptidase M14, carboxypeptidase A YPO2341 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase YPO2341 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain YPO2341 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal YPO2341 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site YPO2341 IPR029017 Enolase N-terminal domain-like YPO2341 IPR029065 Enolase C-terminal domain-like YPO2342 IPR002065 Putative thiol peroxidase Tpx YPO2342 IPR012336 Thioredoxin-like fold YPO2342 IPR013740 Redoxin YPO2342 IPR018219 Thiol peroxidase conserved site YPO2343 IPR002686 Transposase IS200-like YPO2344 IPR000014 PAS domain YPO2344 IPR002078 RNA polymerase sigma factor 54 interaction domain YPO2344 IPR003593 AAA+ ATPase domain YPO2344 IPR009057 Homeodomain-like YPO2344 IPR013767 PAS fold YPO2344 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YPO2344 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPO2344 IPR025944 Sigma-54 interaction domain, conserved site YPO2344 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2344 IPR030828 YPO2344 YPO2345 IPR011979 Conserved hypothetical protein CHP02293 YPO2345 IPR024467 Domain of unknown function DUF2384 YPO2346 IPR014914 RES YPO2347 IPR006507 Uncharacterised protein family UPF0283 YPO2347 IPR021147 Protein of unknown function DUF697 YPO2348 IPR007413 Protein of unknown function DUF463, YcjX-like protein YPO2349 IPR007168 Phage shock protein, PspC, N-terminal YPO2349 IPR014320 Phage shock protein, PspC YPO2350 IPR009554 Phage shock protein, PspB YPO2351 IPR007157 PspA/IM30 YPO2351 IPR014319 Phage shock protein, PspA YPO2352 IPR002078 RNA polymerase sigma factor 54 interaction domain YPO2352 IPR002197 DNA binding HTH domain, Fis-type YPO2352 IPR003593 AAA+ ATPase domain YPO2352 IPR009057 Homeodomain-like YPO2352 IPR014317 Transcription activator PspF YPO2352 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPO2352 IPR025944 Sigma-54 interaction domain, conserved site YPO2352 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2353 IPR002686 Transposase IS200-like YPO2355 IPR000914 Bacterial extracellular solute-binding protein, family 5 YPO2355 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site YPO2355 IPR030678 YPO2355 YPO2356 IPR000515 MetI-like domain YPO2357 IPR000515 MetI-like domain YPO2357 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YPO2358 IPR003439 ABC transporter-like YPO2358 IPR003593 AAA+ ATPase domain YPO2358 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YPO2358 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2359 IPR003439 ABC transporter-like YPO2359 IPR003593 AAA+ ATPase domain YPO2359 IPR017871 ABC transporter, conserved site YPO2359 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2360 IPR029032 AhpD-like YPO2361 IPR000109 Proton-dependent oligopeptide transporter family YPO2361 IPR005279 Amino acid/peptide transporter family YPO2361 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site YPO2361 IPR020846 Major facilitator superfamily domain YPO2361 IPR023517 Amino acid/peptide transporter family, dipeptide and tripeptide permease A YPO2362 IPR009698 Protein of unknown function DUF1282 YPO2363 IPR020317 Uncharacterised protein family YjbD YPO2364 IPR001270 ClpA/B family YPO2364 IPR002611 IstB-like ATP-binding protein YPO2364 IPR003593 AAA+ ATPase domain YPO2364 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2364 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO2365 IPR001584 Integrase, catalytic core YPO2365 IPR006120 Resolvase, HTH domain YPO2365 IPR009057 Homeodomain-like YPO2365 IPR012337 Ribonuclease H-like domain YPO2367 IPR004045 Glutathione S-transferase, N-terminal YPO2367 IPR004046 Glutathione S-transferase, C-terminal YPO2367 IPR010987 Glutathione S-transferase, C-terminal-like YPO2367 IPR012336 Thioredoxin-like fold YPO2368 IPR004625 Pyridoxal phosphate (active vitamin B6) biosynthesis, pyridoxal kinase YPO2368 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase YPO2368 IPR023685 Pyridoxal kinase PdxY YPO2368 IPR029056 Ribokinase-like YPO2369 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPO2369 IPR002305 Aminoacyl-tRNA synthetase, class Ic YPO2369 IPR002307 Tyrosine-tRNA ligase YPO2369 IPR002942 RNA-binding S4 domain YPO2369 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO2369 IPR024088 Tyrosine-tRNA ligase, bacterial-type YPO2369 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 YPO2370 IPR000659 Pyridoxamine 5'-phosphate oxidase YPO2370 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain YPO2370 IPR012349 FMN-binding split barrel YPO2370 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal YPO2370 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site YPO2371 IPR018660 C-type lysozyme, inhibitor YPO2372 IPR005338 Anhydro-N-acetylmuramic acid kinase YPO2373 IPR008816 Glycine zipper 2TM domain YPO2374 IPR000835 MarR-type HTH domain YPO2374 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2374 IPR023071 Transcriptional regulator, SlyA YPO2374 IPR023187 Transcriptional regulator MarR-type, conserved site YPO2375 IPR001395 Aldo/keto reductase YPO2375 IPR020471 Aldo/keto reductase subgroup YPO2375 IPR023210 NADP-dependent oxidoreductase domain YPO2376 IPR010710 Protein of unknown function DUF1289 YPO2377 IPR000917 Sulfatase YPO2377 IPR012549 Domain of unknown function DUF1705 YPO2377 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha YPO2377 IPR017850 Alkaline-phosphatase-like, core domain YPO2378 IPR001647 DNA-binding HTH domain, TetR-type YPO2378 IPR009057 Homeodomain-like YPO2378 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal YPO2378 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal YPO2379 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal YPO2379 IPR013785 Aldolase-type TIM barrel YPO2380 IPR022385 Rhs repeat-associated core YPO2381 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain YPO2381 IPR004361 Glyoxalase I YPO2381 IPR018146 Glyoxalase I, conserved site YPO2381 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase YPO2382 IPR005987 Ribonuclease T YPO2382 IPR012337 Ribonuclease H-like domain YPO2382 IPR013520 Exonuclease, RNase T/DNA polymerase III YPO2383 IPR002109 Glutaredoxin YPO2383 IPR004480 Monothiol glutaredoxin-related YPO2383 IPR012336 Thioredoxin-like fold YPO2383 IPR014434 Monothiol glutaredoxin YPO2385 IPR000064 Endopeptidase, NLPC/P60 domain YPO2386 IPR001189 Manganese/iron superoxide dismutase YPO2386 IPR019831 Manganese/iron superoxide dismutase, N-terminal YPO2386 IPR019832 Manganese/iron superoxide dismutase, C-terminal YPO2386 IPR019833 Manganese/iron superoxide dismutase, binding site YPO2387 IPR000843 Transcription regulator HTH, LacI YPO2387 IPR010982 Lambda repressor-like, DNA-binding domain YPO2387 IPR023588 Transcription regulator HTH, PurR YPO2387 IPR028082 Periplasmic binding protein-like I YPO2388 IPR000847 Transcription regulator HTH, LysR YPO2388 IPR005119 LysR, substrate-binding YPO2388 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2389 IPR004812 Drug resistance transporter Bcr/CmlA subfamily YPO2389 IPR011701 Major facilitator superfamily YPO2389 IPR020846 Major facilitator superfamily domain YPO2390 IPR003333 Mycolic acid cyclopropane synthase YPO2390 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPO2391 IPR001783 Lumazine-binding protein YPO2391 IPR017938 Riboflavin synthase-like beta-barrel YPO2391 IPR023366 ATP synthase subunit alpha-like domain YPO2391 IPR026017 Lumazine-binding domain YPO2392 IPR002528 Multi antimicrobial extrusion protein YPO2392 IPR022913 Multidrug resistance protein MdtK YPO2393 IPR001697 Pyruvate kinase YPO2393 IPR011037 Pyruvate kinase-like, insert domain YPO2393 IPR015793 Pyruvate kinase, barrel YPO2393 IPR015794 Pyruvate kinase, alpha/beta YPO2393 IPR015795 Pyruvate kinase, C-terminal YPO2393 IPR015806 Pyruvate kinase, beta-barrel insert domain YPO2393 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain YPO2393 IPR018209 Pyruvate kinase, active site YPO2394 IPR006817 Lipoprotein leucine-zipper YPO2394 IPR016367 Murein-lipoprotein YPO2395 IPR002686 Transposase IS200-like YPO2396 IPR001584 Integrase, catalytic core YPO2396 IPR006120 Resolvase, HTH domain YPO2396 IPR009057 Homeodomain-like YPO2396 IPR012337 Ribonuclease H-like domain YPO2397 IPR001270 ClpA/B family YPO2397 IPR002611 IstB-like ATP-binding protein YPO2397 IPR003593 AAA+ ATPase domain YPO2397 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2397 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO2398 IPR005490 L,D-transpeptidase catalytic domain YPO2399 IPR003808 Fe-S metabolism associated domain, SufE-like YPO2399 IPR023939 Cysteine desulfuration protein SufE YPO2400 IPR000192 Aminotransferase class V domain YPO2400 IPR010970 Cysteine desulfurase, SufS YPO2400 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPO2400 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPO2400 IPR015424 Pyridoxal phosphate-dependent transferase YPO2400 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site YPO2401 IPR000825 SUF system FeS cluster assembly, SufBD YPO2401 IPR011542 SUF system FeS cluster assembly, SufD YPO2402 IPR003439 ABC transporter-like YPO2402 IPR003593 AAA+ ATPase domain YPO2402 IPR010230 FeS cluster assembly SUF system, ATPase SufC YPO2402 IPR017871 ABC transporter, conserved site YPO2402 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2403 IPR000825 SUF system FeS cluster assembly, SufBD YPO2403 IPR010231 SUF system FeS cluster assembly, SufB YPO2404 IPR000361 FeS cluster biogenesis YPO2404 IPR016092 FeS cluster insertion protein YPO2404 IPR017870 FeS cluster insertion, C-terminal, conserved site YPO2406 IPR003736 Phenylacetic acid degradation-related domain YPO2406 IPR006683 Thioesterase superfamily YPO2406 IPR029069 HotDog domain YPO2406 IPR030863 YPO2406 YPO2407 IPR004113 FAD-linked oxidase, C-terminal YPO2407 IPR006094 FAD linked oxidase, N-terminal YPO2407 IPR009051 Alpha-helical ferredoxin YPO2407 IPR016164 FAD-linked oxidase-like, C-terminal YPO2407 IPR016166 FAD-binding, type 2 YPO2407 IPR016167 FAD-binding, type 2, subdomain 1 YPO2407 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 YPO2407 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPO2407 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO2408 IPR002549 Uncharacterised protein family UPF0118 YPO2409 IPR000121 PEP-utilising enzyme, C-terminal YPO2409 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding YPO2409 IPR006319 Phosphoenolpyruvate synthase YPO2409 IPR008279 PEP-utilising enzyme, mobile domain YPO2409 IPR013815 ATP-grasp fold, subdomain 1 YPO2409 IPR013816 ATP-grasp fold, subdomain 2 YPO2409 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain YPO2409 IPR018274 PEP-utilising enzyme, active site YPO2409 IPR023151 PEP-utilising enzyme, conserved site YPO2410 IPR005177 Bifunctional kinase-pyrophosphorylase YPO2410 IPR008917 Transcription factor, Skn-1-like, DNA-binding domain YPO2410 IPR026530 Phosphoenolpyruvate synthase regulatory protein YPO2411 IPR006218 DAHP synthetase I/KDSA YPO2411 IPR006219 DHAP synthase, class 1 YPO2411 IPR013785 Aldolase-type TIM barrel YPO2414 IPR004143 Biotin/lipoate A/B protein ligase YPO2414 IPR004562 Lipoyltransferase/lipoate-protein ligase YPO2414 IPR019491 Lipoate protein ligase, C-terminal YPO2414 IPR023741 Lipoate-protein ligase A YPO2415 IPR000064 Endopeptidase, NLPC/P60 domain YPO2416 IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF YPO2417 IPR000620 Drug/metabolite transporter YPO2417 IPR022883 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE YPO2418 IPR003342 Glycosyl transferase, family 39 YPO2418 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase YPO2419 IPR002509 Polysaccharide deacetylase YPO2419 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YPO2419 IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable YPO2420 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain YPO2420 IPR002376 Formyl transferase, N-terminal YPO2420 IPR005793 Formyl transferase, C-terminal YPO2420 IPR011034 Formyl transferase, C-terminal-like YPO2420 IPR016040 NAD(P)-binding domain YPO2420 IPR021168 Bifunctional polymyxin resistance protein, ArnA YPO2421 IPR001173 Glycosyltransferase 2-like YPO2421 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase YPO2421 IPR029044 Nucleotide-diphospho-sugar transferases YPO2422 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase YPO2422 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPO2422 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPO2422 IPR015424 Pyridoxal phosphate-dependent transferase YPO2422 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB YPO2423 IPR003439 ABC transporter-like YPO2423 IPR003593 AAA+ ATPase domain YPO2423 IPR017871 ABC transporter, conserved site YPO2423 IPR023693 ABC transporter, vitamin B12, BtuD YPO2423 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2424 IPR000889 Glutathione peroxidase YPO2424 IPR012336 Thioredoxin-like fold YPO2424 IPR029759 Glutathione peroxidase active site YPO2425 IPR000522 ABC transporter, permease protein YPO2425 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC YPO2425 IPR029022 ABC transporter, BtuC-like YPO2426 IPR019638 Protein of unknown function DUF2502 YPO2427 IPR000119 Histone-like bacterial DNA-binding protein YPO2427 IPR005684 Integration host factor, alpha subunit YPO2427 IPR010992 Integration host factor (IHF)-like DNA-binding domain YPO2427 IPR020816 Histone-like DNA-binding protein, conserved site YPO2428 IPR002547 tRNA-binding domain YPO2428 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit YPO2428 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding YPO2428 IPR005146 B3/B4 tRNA-binding domain YPO2428 IPR005147 tRNA synthetase, B5-domain YPO2428 IPR009061 DNA binding domain, putative YPO2428 IPR012340 Nucleic acid-binding, OB-fold YPO2428 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 YPO2429 IPR002319 Phenylalanyl-tRNA synthetase YPO2429 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal YPO2429 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit YPO2429 IPR010978 tRNA-binding arm YPO2429 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial YPO2430 IPR005813 Ribosomal protein L20 YPO2431 IPR001706 Ribosomal protein L35, non-mitochondrial YPO2431 IPR018265 Ribosomal protein L35, conserved site YPO2431 IPR021137 Ribosomal protein L35 YPO2432 IPR001288 Translation initiation factor 3 YPO2432 IPR019813 Translation initiation factor 3, conserved site YPO2432 IPR019814 Translation initiation factor 3, N-terminal YPO2432 IPR019815 Translation initiation factor 3, C-terminal YPO2433 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain YPO2433 IPR002320 Threonine-tRNA ligase, class IIa YPO2433 IPR004095 TGS YPO2433 IPR004154 Anticodon-binding YPO2433 IPR012675 Beta-grasp domain YPO2433 IPR012676 TGS-like YPO2433 IPR012947 Threonyl/alanyl tRNA synthetase, SAD YPO2433 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain YPO2434 IPR025309 KTSC domain YPO2437 IPR002771 Multiple antibiotic resistance (MarC)-related YPO2438 IPR000189 Prokaryotic transglycosylase, active site YPO2438 IPR008258 Lytic transglycosylase-like SLT domain YPO2438 IPR023346 Lysozyme-like domain YPO2439 IPR006127 Periplasmic solute binding protein family YPO2439 IPR006128 Adhesion lipoprotein YPO2439 IPR006129 Adhesin B YPO2440 IPR003439 ABC transporter-like YPO2440 IPR003593 AAA+ ATPase domain YPO2440 IPR017871 ABC transporter, conserved site YPO2440 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2441 IPR001626 ABC-3 YPO2441 IPR029022 ABC transporter, BtuC-like YPO2442 IPR001626 ABC-3 YPO2442 IPR029022 ABC transporter, BtuC-like YPO2444 IPR011009 Protein kinase-like domain YPO2444 IPR016477 Fructosamine/Ketosamine-3-kinase YPO2445 IPR025229 YniB-like protein YPO2446 IPR006439 HAD hydrolase, subfamily IA YPO2446 IPR023198 Phosphoglycolate phosphatase, domain 2 YPO2446 IPR023214 HAD-like domain YPO2447 IPR001207 Transposase, mutator type YPO2448 IPR006076 FAD dependent oxidoreductase YPO2448 IPR023493 N-methyl-L-tryptophan oxidase MTOX YPO2448 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPO2449 IPR000792 Transcription regulator LuxR, C-terminal YPO2449 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2449 IPR016032 Signal transduction response regulator, C-terminal effector YPO2450 IPR002549 Uncharacterised protein family UPF0118 YPO2451 IPR001763 Rhodanese-like domain YPO2451 IPR020936 Uncharacterised protein family UPF0176 YPO2451 IPR022111 Protein of unknown function DUF3650 YPO2455 IPR000620 Drug/metabolite transporter YPO2456 IPR001690 Autoinducer synthesis protein YPO2456 IPR016181 Acyl-CoA N-acyltransferase YPO2456 IPR018311 Autoinducer synthesis, conserved site YPO2457 IPR000792 Transcription regulator LuxR, C-terminal YPO2457 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain YPO2457 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2457 IPR016032 Signal transduction response regulator, C-terminal effector YPO2458 IPR000847 Transcription regulator HTH, LysR YPO2458 IPR005119 LysR, substrate-binding YPO2458 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2459 IPR005828 General substrate transporter YPO2459 IPR005829 Sugar transporter, conserved site YPO2459 IPR020846 Major facilitator superfamily domain YPO2460 IPR014826 Formaldehyde-activating enzyme YPO2460 IPR020568 Ribosomal protein S5 domain 2-type fold YPO2461 IPR001395 Aldo/keto reductase YPO2461 IPR023210 NADP-dependent oxidoreductase domain YPO2462 IPR013396 CRISPR-associated protein Csy4 YPO2463 IPR013399 CRISPR-associated protein Csy3 YPO2464 IPR013398 CRISPR-associated protein Csy2 YPO2465 IPR013397 CRISPR-associated protein Csy1 YPO2467 IPR013395 Helicase Cas3, CRISPR-associated, Yersinia-type YPO2467 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2468 IPR002729 CRISPR-associated protein Cas1 YPO2468 IPR019857 CRISPR-associated protein Cas1, YPEST subtype YPO2470 IPR006685 Mechanosensitive ion channel MscS YPO2470 IPR010920 Like-Sm (LSM) domain YPO2470 IPR030192 YPO2470 YPO2472 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel YPO2473 IPR015045 Protein of unknown function DUF1861 YPO2473 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain YPO2474 IPR007184 Mannoside phosphorylase YPO2474 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain YPO2475 IPR000515 MetI-like domain YPO2476 IPR000515 MetI-like domain YPO2478 IPR000843 Transcription regulator HTH, LacI YPO2478 IPR010982 Lambda repressor-like, DNA-binding domain YPO2478 IPR028082 Periplasmic binding protein-like I YPO2479 IPR005841 Alpha-D-phosphohexomutase superfamily YPO2479 IPR005843 Alpha-D-phosphohexomutase, C-terminal YPO2479 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I YPO2479 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II YPO2479 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III YPO2479 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III YPO2479 IPR016066 Alpha-D-phosphohexomutase, conserved site YPO2480 IPR003439 ABC transporter-like YPO2480 IPR003593 AAA+ ATPase domain YPO2480 IPR008995 Molybdate/tungstate binding, C-terminal YPO2480 IPR012340 Nucleic acid-binding, OB-fold YPO2480 IPR013611 Transport-associated OB, type 2 YPO2480 IPR017871 ABC transporter, conserved site YPO2480 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2483 IPR025459 Protein of unknown function DUF4279 YPO2486 IPR006914 VENN motif-containing domain YPO2489 IPR016630 Uncharacterised conserved protein UCP015278 YPO2490 IPR006914 VENN motif-containing domain YPO2490 IPR008619 Filamentous haemagglutinin repeat YPO2490 IPR008638 Filamentous haemagglutinin, N-terminal YPO2490 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPO2490 IPR011050 Pectin lyase fold/virulence factor YPO2490 IPR012334 Pectin lyase fold YPO2490 IPR024973 ESPR domain YPO2490 IPR025157 Haemagluttinin repeat YPO2491 IPR005565 Haemolysin activator HlyB YPO2491 IPR013686 Polypeptide-transport-associated, ShlB-type YPO2491 IPR027282 Two partner secretion pathway transporter YPO2492 IPR000951 Phthalate dioxygenase reductase YPO2492 IPR001041 2Fe-2S ferredoxin-type domain YPO2492 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPO2492 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site YPO2492 IPR008333 Oxidoreductase, FAD-binding domain YPO2492 IPR012675 Beta-grasp domain YPO2492 IPR017938 Riboflavin synthase-like beta-barrel YPO2493 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit YPO2493 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain YPO2493 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site YPO2493 IPR017941 Rieske [2Fe-2S] iron-sulphur domain YPO2494 IPR000060 BCCT transporter family YPO2494 IPR018093 BCCT transporter, conserved site YPO2496 IPR001804 Isocitrate and isopropylmalate dehydrogenases family YPO2496 IPR011829 Tartrate dehydrogenase YPO2496 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site YPO2496 IPR024084 Isopropylmalate dehydrogenase-like domain YPO2497 IPR000847 Transcription regulator HTH, LysR YPO2497 IPR005119 LysR, substrate-binding YPO2497 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2498 IPR000843 Transcription regulator HTH, LacI YPO2498 IPR010982 Lambda repressor-like, DNA-binding domain YPO2498 IPR025997 Periplasmic binding protein domain YPO2498 IPR028082 Periplasmic binding protein-like I YPO2499 IPR001851 ABC transporter, permease YPO2500 IPR003439 ABC transporter-like YPO2500 IPR003593 AAA+ ATPase domain YPO2500 IPR017871 ABC transporter, conserved site YPO2500 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2501 IPR025997 Periplasmic binding protein domain YPO2501 IPR028082 Periplasmic binding protein-like I YPO2502 IPR002085 Alcohol dehydrogenase superfamily, zinc-type YPO2502 IPR011032 GroES (chaperonin 10)-like YPO2502 IPR013149 Alcohol dehydrogenase, C-terminal YPO2502 IPR013154 Alcohol dehydrogenase GroES-like YPO2502 IPR016040 NAD(P)-binding domain YPO2502 IPR020843 Polyketide synthase, enoylreductase YPO2503 IPR031829 YPO2503 YPO2504 IPR031829 YPO2504 YPO2505 IPR002524 Cation efflux protein YPO2505 IPR027469 Cation efflux protein transmembrane domain YPO2506 IPR000758 Virulence-related outer membrane protein YPO2506 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel YPO2506 IPR027385 Outer membrane protein beta-barrel YPO2507 IPR000620 Drug/metabolite transporter YPO2508 IPR000182 GNAT domain YPO2508 IPR016181 Acyl-CoA N-acyltransferase YPO2509 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal YPO2509 IPR023506 Trans-aconitate 2-methyltransferase YPO2509 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPO2510 IPR002177 DNA-binding protein Dps YPO2510 IPR008331 Ferritin/DPS protein domain YPO2510 IPR009078 Ferritin-like superfamily YPO2510 IPR012347 Ferritin-related YPO2510 IPR023067 DNA protection during starvation protein, gammaproteobacteria YPO2510 IPR023188 DNA-binding protein Dps, conserved site YPO2511 IPR003848 Domain of unknown function DUF218 YPO2511 IPR011990 Tetratricopeptide-like helical domain YPO2511 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO2512 IPR001320 Ionotropic glutamate receptor YPO2512 IPR001638 Extracellular solute-binding protein, family 3 YPO2512 IPR018313 Extracellular solute-binding protein, family 3, conserved site YPO2513 IPR000515 MetI-like domain YPO2513 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family YPO2514 IPR003439 ABC transporter-like YPO2514 IPR003593 AAA+ ATPase domain YPO2514 IPR017871 ABC transporter, conserved site YPO2514 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2514 IPR030679 YPO2514 YPO2515 IPR000014 PAS domain YPO2515 IPR001610 PAC motif YPO2515 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YPO2515 IPR004090 Chemotaxis methyl-accepting receptor YPO2515 IPR013656 PAS fold-4 YPO2516 IPR001584 Integrase, catalytic core YPO2516 IPR006120 Resolvase, HTH domain YPO2516 IPR009057 Homeodomain-like YPO2516 IPR012337 Ribonuclease H-like domain YPO2517 IPR001270 ClpA/B family YPO2517 IPR002611 IstB-like ATP-binding protein YPO2517 IPR003593 AAA+ ATPase domain YPO2517 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2517 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO2519 IPR010286 Ribosomal RNA large subunit methyltransferase F-like YPO2519 IPR016909 Ribosomal RNA large subunit methyltransferase F YPO2519 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPO2521 IPR010854 Domain of unknown function DUF1471 YPO2521 IPR025543 Dodecin-like YPO2522 IPR000312 Glycosyl transferase, family 3 YPO2522 IPR017459 Glycosyl transferase family 3, N-terminal domain YPO2523 IPR000873 AMP-dependent synthetase/ligase YPO2523 IPR010192 2-succinylbenzoate--CoA ligase YPO2523 IPR020845 AMP-binding, conserved site YPO2524 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase YPO2524 IPR010196 O-succinylbenzoic acid (OSB) synthetase YPO2524 IPR010197 O-succinylbenzoate synthase, low GC Gram-positive bacteria-type YPO2524 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal YPO2524 IPR029017 Enolase N-terminal domain-like YPO2524 IPR029065 Enolase C-terminal domain-like YPO2525 IPR001753 Crotonase superfamily YPO2525 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase YPO2525 IPR014748 Crontonase, C-terminal YPO2525 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site YPO2525 IPR029045 ClpP/crotonase-like domain YPO2526 IPR000073 Alpha/beta hydrolase fold-1 YPO2526 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase YPO2526 IPR029058 Alpha/Beta hydrolase fold YPO2527 IPR004433 Menaquinone biosynthesis protein MenD YPO2527 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YPO2527 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain YPO2527 IPR029061 Thiamin diphosphate-binding fold YPO2527 IPR032264 YPO2527 YPO2528 IPR004561 Isochorismate synthase YPO2528 IPR005801 ADC synthase YPO2528 IPR015890 Chorismate binding, C-terminal YPO2531 IPR010279 Protein of unknown function DUF883, ElaB YPO2533 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase YPO2533 IPR004786 6-phosphogluconate dehydratase YPO2533 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YPO2533 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site YPO2534 IPR005624 Domain of unknown function DUF336 YPO2534 IPR010371 Uncharacterised protein family UPF0303 YPO2535 IPR011701 Major facilitator superfamily YPO2535 IPR020846 Major facilitator superfamily domain YPO2536 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPO2536 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain YPO2536 IPR016040 NAD(P)-binding domain YPO2537 IPR000843 Transcription regulator HTH, LacI YPO2537 IPR001761 Periplasmic binding protein/LacI sugar binding domain YPO2537 IPR010982 Lambda repressor-like, DNA-binding domain YPO2537 IPR028082 Periplasmic binding protein-like I YPO2538 IPR003790 Protein of unknown function DUF187 YPO2538 IPR013781 Glycoside hydrolase, catalytic domain YPO2538 IPR017853 Glycoside hydrolase, superfamily YPO2539 IPR002347 Glucose/ribitol dehydrogenase YPO2539 IPR016040 NAD(P)-binding domain YPO2539 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPO2540 IPR006001 Carbohydrate kinase, thermoresistant glucokinase YPO2540 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2540 IPR031322 YPO2540 YPO2541 IPR004375 Conserved hypothetical protein CHP00022 YPO2543 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase YPO2543 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 YPO2544 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase YPO2544 IPR003918 NADH:ubiquinone oxidoreductase YPO2544 IPR010227 NADH-quinone oxidoreductase, chain M/4 YPO2545 IPR001516 NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal YPO2545 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase YPO2545 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 YPO2545 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup YPO2546 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K YPO2547 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 YPO2548 IPR010226 NADH-quinone oxidoreductase, chain I YPO2548 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPO2548 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO2549 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H YPO2549 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site YPO2550 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site YPO2550 IPR001041 2Fe-2S ferredoxin-type domain YPO2550 IPR006656 Molybdopterin oxidoreductase YPO2550 IPR006657 Molydopterin dinucleotide-binding domain YPO2550 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain YPO2550 IPR009010 Aspartate decarboxylase-like domain YPO2550 IPR010228 NADH:ubiquinone oxidoreductase, subunit G YPO2550 IPR012675 Beta-grasp domain YPO2550 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding YPO2551 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site YPO2551 IPR011537 NADH ubiquinone oxidoreductase, F subunit YPO2551 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit YPO2551 IPR019575 NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding YPO2552 IPR002023 NADH-quinone oxidoreductase subunit E-like YPO2552 IPR012336 Thioredoxin-like fold YPO2553 IPR001135 NADH-quinone oxidoreductase, subunit D YPO2553 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit YPO2553 IPR010218 NADH dehydrogenase, subunit C YPO2553 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site YPO2553 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H YPO2553 IPR023062 NADH dehydrogenase, subunit CD YPO2553 IPR029014 NiFe hydrogenase-like YPO2554 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit YPO2554 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit YPO2555 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 YPO2555 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid YPO2556 IPR000847 Transcription regulator HTH, LysR YPO2556 IPR005119 LysR, substrate-binding YPO2556 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2558 IPR004839 Aminotransferase, class I/classII YPO2558 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPO2558 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPO2558 IPR015424 Pyridoxal phosphate-dependent transferase YPO2559 IPR003607 HD/PDEase domain YPO2559 IPR006674 HD domain YPO2559 IPR022971 5'-deoxynucleotidase YfbR YPO2561 IPR004680 Citrate transporter-like domain YPO2561 IPR006037 Regulator of K+ conductance, C-terminal YPO2561 IPR031312 YPO2561 YPO2562 IPR006439 HAD hydrolase, subfamily IA YPO2562 IPR023198 Phosphoglycolate phosphatase, domain 2 YPO2562 IPR023214 HAD-like domain YPO2563 IPR005587 Uncharacterised protein family UPF0304, YfbU YPO2563 IPR023145 YfbU, helix-hairpin domain YPO2563 IPR023146 YfbU, alpha-helical bundle domain YPO2564 IPR007334 Uncharacterised protein family UPF0208 YPO2566 IPR000890 Aliphatic acid kinase, short-chain YPO2566 IPR004372 Acetate/Proprionate kinase YPO2566 IPR023865 Aliphatic acid kinase, short-chain, conserved site YPO2567 IPR002505 Phosphate acetyl/butaryl transferase YPO2567 IPR004614 Phosphate acetyltransferase YPO2567 IPR010766 DRTGG YPO2567 IPR016475 Phosphate acetyltransferase, bacteria YPO2567 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2567 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain like YPO2568 IPR000843 Transcription regulator HTH, LacI YPO2568 IPR010982 Lambda repressor-like, DNA-binding domain YPO2568 IPR028082 Periplasmic binding protein-like I YPO2569 IPR002178 PTS EIIA type-2 domain YPO2569 IPR016152 Phosphotransferase/anion transporter YPO2569a IPR003501 Phosphotransferase system, EIIB component, type 2/3 YPO2571 IPR001207 Transposase, mutator type YPO2572 IPR001264 Glycosyl transferase, family 51 YPO2572 IPR023346 Lysozyme-like domain YPO2573 IPR001599 Alpha-2-macroglobulin YPO2573 IPR002890 Alpha-2-macroglobulin, N-terminal YPO2573 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid YPO2573 IPR011625 Alpha-2-macroglobulin, N-terminal 2 YPO2573 IPR021868 Alpha-2-macroglobulin MG1 domain YPO2574 IPR009898 Protein of unknown function DUF1440 YPO2576 IPR000281 Helix-turn-helix protein RpiR YPO2576 IPR001347 Sugar isomerase (SIS) YPO2576 IPR009057 Homeodomain-like YPO2576 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2577 IPR010061 Methylmalonate-semialdehyde dehydrogenase YPO2577 IPR015590 Aldehyde dehydrogenase domain YPO2577 IPR016160 Aldehyde dehydrogenase, cysteine active site YPO2577 IPR016161 Aldehyde/histidinol dehydrogenase YPO2577 IPR016162 Aldehyde dehydrogenase, N-terminal YPO2577 IPR016163 Aldehyde dehydrogenase, C-terminal YPO2578 IPR000399 TPP-binding enzyme, conserved site YPO2578 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YPO2578 IPR012000 Thiamine pyrophosphate enzyme, central domain YPO2578 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain YPO2578 IPR029035 DHS-like NAD/FAD-binding domain YPO2578 IPR029061 Thiamin diphosphate-binding fold YPO2578 IPR030817 YPO2578 YPO2581 IPR025997 Periplasmic binding protein domain YPO2581 IPR028082 Periplasmic binding protein-like I YPO2582 IPR003439 ABC transporter-like YPO2582 IPR003593 AAA+ ATPase domain YPO2582 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2583 IPR001851 ABC transporter, permease YPO2584 IPR000683 Oxidoreductase, N-terminal YPO2584 IPR004104 Oxidoreductase, C-terminal YPO2584 IPR016040 NAD(P)-binding domain YPO2585 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YPO2585 IPR011611 Carbohydrate kinase PfkB YPO2585 IPR018659 Protein of unknown function DUF2090 YPO2585 IPR029056 Ribokinase-like YPO2585 IPR030830 YPO2585 YPO2586 IPR013022 Xylose isomerase-like, TIM barrel domain YPO2586 IPR030823 YPO2586 YPO2587 IPR011051 RmlC-like cupin domain YPO2587 IPR014710 RmlC-like jelly roll fold YPO2587 IPR021120 KduI/IolB isomerase YPO2587 IPR024203 5-deoxy-glucuronate isomerase, IolB YPO2588 IPR003439 ABC transporter-like YPO2588 IPR003593 AAA+ ATPase domain YPO2588 IPR011527 ABC transporter type 1, transmembrane domain YPO2588 IPR017871 ABC transporter, conserved site YPO2588 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2589 IPR007138 Antibiotic biosynthesis monooxygenase-like domain YPO2589 IPR011008 Dimeric alpha-beta barrel YPO2590 IPR009052 DNA polymerase III-theta, bacterial YPO2590 IPR011326 Homologue of theta DNA polymerase III YPO2590 IPR015065 Glycogen synthesis protein YPO2593 IPR000792 Transcription regulator LuxR, C-terminal YPO2593 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2593 IPR016032 Signal transduction response regulator, C-terminal effector YPO2595 IPR002059 Cold-shock protein, DNA-binding YPO2595 IPR011129 Cold shock protein YPO2595 IPR012156 Cold shock, CspA YPO2595 IPR012340 Nucleic acid-binding, OB-fold YPO2595 IPR019844 Cold-shock conserved site YPO2596 IPR003691 Putative fluoride ion transporter CrcB YPO2597 IPR003369 Sec-independent protein translocase protein TatA/B/E YPO2597 IPR006312 Sec-independent protein translocase protein TatA/E YPO2597 IPR024905 Sec-independent protein translocase protein TatE YPO2598 IPR003698 Lipoyl synthase YPO2598 IPR006638 Elongator protein 3/MiaB/NifB YPO2598 IPR007197 Radical SAM YPO2598 IPR013785 Aldolase-type TIM barrel YPO2598 IPR031691 YPO2598 YPO2599 IPR000544 Octanoyltransferase YPO2599 IPR004143 Biotin/lipoate A/B protein ligase YPO2599 IPR020605 Octanoyltransferase, conserved site YPO2600 IPR007454 Uncharacterised protein family UPF0250 YPO2600 IPR027471 YbeD-like domain YPO2601 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal YPO2601 IPR012338 Beta-lactamase/transpeptidase-like YPO2601 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal YPO2601 IPR015956 Penicillin-binding protein-associated YPO2601 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A YPO2602 IPR007730 Sporulation-related domain YPO2602 IPR009009 RlpA-like double-psi beta-barrel domain YPO2602 IPR012997 Rare lipoprotein A, bacterial YPO2603 IPR001182 Cell cycle protein FtsW/RodA YPO2603 IPR011923 Rod shape-determining protein RodA YPO2603 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site YPO2604 IPR001460 Penicillin-binding protein, transpeptidase YPO2604 IPR005311 Penicillin-binding protein, dimerisation domain YPO2604 IPR012338 Beta-lactamase/transpeptidase-like YPO2604 IPR017790 Penicillin-binding protein 2 YPO2605 IPR003742 SPOUT methyltransferase, predicted YPO2605 IPR016051 Ribosomal RNA large subunit methyltransferase H YPO2605 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPO2605 IPR029028 Alpha/beta knot methyltransferases YPO2606 IPR004394 Protein Iojap/ribosomal silencing factor RsfS YPO2607 IPR004821 Cytidyltransferase-like domain YPO2607 IPR005248 Probable nicotinate-nucleotide adenylyltransferase YPO2607 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO2608 IPR005790 DNA polymerase III, delta subunit YPO2608 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal YPO2608 IPR010372 DNA polymerase III, delta YPO2608 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2608 IPR032780 YPO2608 YPO2609 IPR007485 Lipopolysaccharide assembly, LptE YPO2610 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPO2610 IPR002300 Aminoacyl-tRNA synthetase, class Ia YPO2610 IPR002302 Leucine-tRNA ligase YPO2610 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain YPO2610 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding YPO2610 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding YPO2610 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO2610 IPR025709 Leucyl-tRNA synthetase, editing domain YPO2611 IPR009912 Protein of unknown function DUF1451 YPO2612 IPR003439 ABC transporter-like YPO2612 IPR003593 AAA+ ATPase domain YPO2612 IPR017871 ABC transporter, conserved site YPO2612 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2612 IPR030206 YPO2612 YPO2612 IPR030679 YPO2612 YPO2613 IPR000515 MetI-like domain YPO2613 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family YPO2613 IPR030205 YPO2613 YPO2614 IPR000515 MetI-like domain YPO2614 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family YPO2614 IPR030202 YPO2614 YPO2615 IPR001638 Extracellular solute-binding protein, family 3 YPO2616 IPR003010 Carbon-nitrogen hydrolase YPO2616 IPR004563 Apolipoprotein N-acyltransferase YPO2617 IPR000644 CBS domain YPO2617 IPR005170 Transporter-associated domain YPO2617 IPR016166 FAD-binding, type 2 YPO2617 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 YPO2618 IPR002036 Endoribonuclease YbeY YPO2618 IPR020549 Endoribonuclease YbeY, conserved site YPO2618 IPR023091 Metalloprotease catalytic domain, predicted YPO2619 IPR003714 PhoH-like protein YPO2619 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2620 IPR002792 TRAM domain YPO2620 IPR005839 Methylthiotransferase YPO2620 IPR006463 tRNA-i(6)A37 modification enzyme MiaB YPO2620 IPR006638 Elongator protein 3/MiaB/NifB YPO2620 IPR007197 Radical SAM YPO2620 IPR013848 Methylthiotransferase, N-terminal YPO2620 IPR020612 Methylthiotransferase, conserved site YPO2620 IPR023404 Radical SAM, alpha/beta horseshoe YPO2620 IPR023970 Methylthiotransferase/radical SAM-type protein YPO2621 IPR002938 Monooxygenase, FAD-binding YPO2621 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 YPO2621 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPO2623 IPR001962 Asparagine synthase YPO2623 IPR006426 Asparagine synthase, glutamine-hydrolyzing YPO2623 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO2623 IPR017932 Glutamine amidotransferase type 2 domain YPO2623 IPR029055 Nucleophile aminohydrolases, N-terminal YPO2624 IPR006357 HAD-superfamily hydrolase, subfamily IIA YPO2624 IPR023214 HAD-like domain YPO2624 IPR023215 Nitrophenylphosphatase-like domain YPO2625 IPR000600 ROK YPO2625 IPR000835 MarR-type HTH domain YPO2625 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2626 IPR003764 N-acetylglucosamine-6-phosphate deacetylase YPO2626 IPR006680 Amidohydrolase 1 YPO2626 IPR011059 Metal-dependent hydrolase, composite domain YPO2626 IPR032466 YPO2626 YPO2627 IPR004547 Glucosamine-6-phosphate isomerase YPO2627 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase YPO2627 IPR018321 Glucosamine-6-phosphate isomerase, conserved site YPO2628 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 YPO2628 IPR001996 Phosphotransferase system, IIB component, type 1 YPO2628 IPR003352 Phosphotransferase system, EIIC YPO2628 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component YPO2628 IPR011055 Duplicated hybrid motif YPO2628 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site YPO2629 IPR002686 Transposase IS200-like YPO2630 IPR000924 Glutamyl/glutaminyl-tRNA synthetase YPO2630 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPO2630 IPR004514 Glutamine-tRNA synthetase YPO2630 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain YPO2630 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO2630 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain YPO2630 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain YPO2630 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain YPO2630 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain YPO2630 IPR022861 Glutamine-tRNA ligase, bacterial YPO2631 IPR005318 Outer membrane porin, bacterial YPO2631 IPR023614 Porin domain YPO2634 IPR002481 Ferric-uptake regulator YPO2634 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2635 IPR001226 Flavodoxin, conserved site YPO2635 IPR008254 Flavodoxin/nitric oxide synthase YPO2635 IPR010086 Flavodoxin, long chain YPO2635 IPR029039 Flavoprotein-like YPO2637 IPR002145 Ribbon-helix-helix protein, copG YPO2638 IPR000073 Alpha/beta hydrolase fold-1 YPO2638 IPR029058 Alpha/Beta hydrolase fold YPO2640 IPR002514 Transposase IS3/IS911family YPO2640 IPR009057 Homeodomain-like YPO2642 IPR001270 ClpA/B family YPO2642 IPR002611 IstB-like ATP-binding protein YPO2642 IPR003593 AAA+ ATPase domain YPO2642 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2642 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO2643 IPR001584 Integrase, catalytic core YPO2643 IPR006120 Resolvase, HTH domain YPO2643 IPR009057 Homeodomain-like YPO2643 IPR012337 Ribonuclease H-like domain YPO2644 IPR002509 Polysaccharide deacetylase YPO2644 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YPO2645 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain YPO2646 IPR000515 MetI-like domain YPO2647 IPR000644 CBS domain YPO2647 IPR003439 ABC transporter-like YPO2647 IPR003593 AAA+ ATPase domain YPO2647 IPR005892 Glycine betaine transport ATP-binding subunit YPO2647 IPR017871 ABC transporter, conserved site YPO2647 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2648 IPR000358 Ribonucleotide reductase small subunit YPO2648 IPR009078 Ferritin-like superfamily YPO2648 IPR012348 Ribonucleotide reductase-related YPO2648 IPR026494 Ribonucleoside reductase subunit beta, NrdF YPO2648 IPR030475 YPO2648 YPO2649 IPR000788 Ribonucleotide reductase large subunit, C-terminal YPO2649 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal YPO2649 IPR013346 Ribonucleotide reductase, class I , alpha subunit YPO2649 IPR013509 Ribonucleotide reductase large subunit, N-terminal YPO2649 IPR013554 Ribonucleotide reductase N-terminal YPO2649 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE YPO2650 IPR004465 Ribonucleotide reductase Class Ib, NrdI YPO2650 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial YPO2650 IPR029039 Flavoprotein-like YPO2651 IPR002109 Glutaredoxin YPO2651 IPR011909 Glutaredoxin-like protein NrdH YPO2651 IPR012336 Thioredoxin-like fold YPO2652 IPR009435 Acid shock YPO2652 IPR023497 Acid shock protein YPO2653 IPR018994 Protein of unknown function DUF2002 YPO2654 IPR009587 Protein of unknown function DUF1198 YPO2656 IPR001207 Transposase, mutator type YPO2657 IPR006983 MbeD/MobD-like YPO2659 IPR002059 Cold-shock protein, DNA-binding YPO2659 IPR011129 Cold shock protein YPO2659 IPR012156 Cold shock, CspA YPO2659 IPR012340 Nucleic acid-binding, OB-fold YPO2659 IPR019844 Cold-shock conserved site YPO2660 IPR000914 Bacterial extracellular solute-binding protein, family 5 YPO2660 IPR030678 YPO2660 YPO2661 IPR000515 MetI-like domain YPO2662 IPR000515 MetI-like domain YPO2663 IPR003439 ABC transporter-like YPO2663 IPR003593 AAA+ ATPase domain YPO2663 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2664 IPR003439 ABC transporter-like YPO2664 IPR003593 AAA+ ATPase domain YPO2664 IPR017871 ABC transporter, conserved site YPO2664 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2665 IPR002026 Urease, gamma/gamma-beta subunit YPO2665 IPR012010 Urease, gamma subunit YPO2666 IPR002019 Urease, beta subunit YPO2667 IPR005848 Urease, alpha subunit YPO2667 IPR006680 Amidohydrolase 1 YPO2667 IPR011059 Metal-dependent hydrolase, composite domain YPO2667 IPR011612 Urease alpha-subunit, N-terminal domain YPO2667 IPR017950 Urease active site YPO2667 IPR029754 Urease nickel binding site YPO2667 IPR032466 YPO2667 YPO2668 IPR004029 UreE urease accessory, N-terminal YPO2668 IPR007864 Urease accessory protein UreE, C-terminal domain YPO2668 IPR012406 Urease accessory protein UreE YPO2669 IPR002639 Urease accessory protein UreF YPO2670 IPR003495 CobW/HypB/UreG domain YPO2670 IPR004400 Urease accessory protein UreG YPO2670 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2672 IPR004937 Urea transporter YPO2672 IPR017807 Urea transporter, bacteria YPO2672 IPR029020 Ammonium/urea transporter YPO2673 IPR004688 Nickel/cobalt transporter, high-affinity, bacteria YPO2673 IPR011541 Nickel/cobalt transporter, high-affinity YPO2674 IPR010486 HNS-dependent expression A/B YPO2674 IPR024972 HNS-dependent expression A YPO2674 IPR028623 HNS-dependent expression B YPO2675 IPR003148 Regulator of K+ conductance, N-terminal YPO2675 IPR013099 Two pore domain potassium channel domain YPO2675 IPR016040 NAD(P)-binding domain YPO2676 IPR003691 Putative fluoride ion transporter CrcB YPO2677 IPR003691 Putative fluoride ion transporter CrcB YPO2678 IPR003501 Phosphotransferase system, EIIB component, type 2/3 YPO2679 IPR003352 Phosphotransferase system, EIIC YPO2679 IPR004501 Phosphotransferase system, EIIC component, type 3 YPO2679 IPR004796 Phosphotransferase system, cellobiose-type IIC component YPO2680 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit YPO2681 IPR009057 Homeodomain-like YPO2681 IPR011051 RmlC-like cupin domain YPO2681 IPR013096 Cupin 2, conserved barrel YPO2681 IPR014710 RmlC-like jelly roll fold YPO2681 IPR018060 DNA binding HTH domain, AraC-type YPO2681 IPR018062 HTH domain AraC-type, conserved site YPO2681 IPR020449 Transcription regulator HTH, AraC- type YPO2682 IPR002509 Polysaccharide deacetylase YPO2682 IPR006879 Uncharacterised protein family UPF0249/HpnK YPO2682 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YPO2682 IPR022948 Uncharacterised protein family UPF0249 YPO2685 IPR005621 Regulation modulator SeqA YPO2685 IPR010985 Ribbon-helix-helix YPO2685 IPR013321 Arc-type ribbon-helix-helix YPO2685 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain YPO2686 IPR005843 Alpha-D-phosphohexomutase, C-terminal YPO2686 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I YPO2686 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II YPO2686 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III YPO2686 IPR005852 Phosphoglucomutase, alpha-D-glucose specific YPO2686 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III YPO2686 IPR016066 Alpha-D-phosphohexomutase, conserved site YPO2687 IPR000620 Drug/metabolite transporter YPO2688 IPR001789 Signal transduction response regulator, receiver domain YPO2688 IPR001867 Signal transduction response regulator, C-terminal YPO2688 IPR011006 CheY-like superfamily YPO2688 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2689 IPR003018 GAF domain YPO2689 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO2689 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPO2689 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal YPO2689 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPO2689 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO2689 IPR025201 Sensor protein KdpD, transmembrane domain YPO2689 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2689 IPR029016 GAF domain-like YPO2690 IPR003820 Potassium-transporting ATPase C chain YPO2691 IPR001757 Cation-transporting P-type ATPase YPO2691 IPR006391 Potassium-transporting P-type ATPase, B chain, subfamily IA YPO2691 IPR008250 P-type ATPase, A domain YPO2691 IPR018303 P-type ATPase, phosphorylation site YPO2691 IPR023214 HAD-like domain YPO2691 IPR023299 P-type ATPase, cytoplasmic domain N YPO2692 IPR004623 Potassium-transporting ATPase A chain YPO2693 IPR019663 Uncharacterised protein YbfA YPO2694 IPR013560 Domain of unknown function DUF1722 YPO2695 IPR002081 Cryptochrome/DNA photolyase, class 1 YPO2695 IPR005101 DNA photolyase, FAD-binding/Cryptochrome, C-terminal YPO2695 IPR006050 DNA photolyase, N-terminal YPO2695 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO2695 IPR018394 Cryptochrome/DNA photolyase, class 1 conserved site, C-terminal YPO2696 IPR000396 Cyclic-AMP phosphodiesterase, class-II YPO2696 IPR001279 Beta-lactamase-like YPO2696 IPR024225 Cyclic-AMP phosphodiesterase class-II, conserved site YPO2697 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 YPO2699 IPR003778 Allophanate hydrolase subunit 2 YPO2699 IPR029000 Cyclophilin-like domain YPO2700 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF YPO2700 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YPO2701 IPR010374 Protein of unknown function DUF969 YPO2702 IPR009323 Protein of unknown function DUF979 YPO2703 IPR000816 Peptidase C15, pyroglutamyl peptidase I YPO2703 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like YPO2703 IPR029762 Pyroglutamyl peptidase I, bacterial-type YPO2704 IPR002043 Uracil-DNA glycosylase YPO2704 IPR005122 Uracil-DNA glycosylase-like YPO2704 IPR018085 Uracil-DNA glycosylase, active site YPO2705 IPR001150 Glycine radical domain YPO2705 IPR011140 Autonomous glycyl radical cofactor GrcA YPO2705 IPR019777 Formate C-acetyltransferase glycine radical, conserved site YPO2706 IPR024499 Protein of unknown function DUF2974 YPO2706 IPR029058 Alpha/Beta hydrolase fold YPO2707 IPR002110 Ankyrin repeat YPO2707 IPR020683 Ankyrin repeat-containing domain YPO2708 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site YPO2708 IPR001650 Helicase, C-terminal YPO2708 IPR011545 DEAD/DEAH box helicase domain YPO2708 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YPO2708 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2708 IPR028621 ATP-dependent RNA helicase SrmB YPO2709 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPO2709 IPR007848 Methyltransferase small domain YPO2709 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase YPO2709 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPO2710 IPR003953 FAD binding domain YPO2710 IPR005288 L-aspartate oxidase YPO2710 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal YPO2710 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPO2710 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain YPO2711 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site YPO2711 IPR007627 RNA polymerase sigma-70 region 2 YPO2711 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2711 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 YPO2711 IPR013324 RNA polymerase sigma factor, region 3/4 YPO2711 IPR013325 RNA polymerase sigma factor, region 2 YPO2711 IPR014284 RNA polymerase sigma-70 like domain YPO2711 IPR014286 RNA polymerase sigma-70 RpoE type YPO2712 IPR005572 Anti sigma-E protein RseA, N-terminal YPO2712 IPR005573 Anti sigma-E protein RseA, C-terminal YPO2712 IPR026279 Sigma-E factor negative regulatory protein RseA YPO2713 IPR005588 MucB/RseB YPO2713 IPR033434 YPO2713 YPO2713 IPR033436 YPO2713 YPO2714 IPR007359 Positive regulator of sigma(E), RseC/MucC YPO2714 IPR026268 Protein RseC YPO2716 IPR000640 Translation elongation factor EFG, V domain YPO2716 IPR000795 Elongation factor, GTP-binding domain YPO2716 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 YPO2716 IPR005225 Small GTP-binding protein domain YPO2716 IPR006297 Elongation factor 4 YPO2716 IPR009022 Elongation factor G, III-V domain YPO2716 IPR013842 GTP-binding protein LepA, C-terminal YPO2716 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2716 IPR031157 YPO2716 YPO2717 IPR000223 Peptidase S26A, signal peptidase I YPO2717 IPR015927 Peptidase S24/S26A/S26B/S26C YPO2717 IPR019533 Peptidase S26 YPO2717 IPR019756 Peptidase S26A, signal peptidase I, serine active site YPO2717 IPR019757 Peptidase S26A, signal peptidase I, lysine active site YPO2717 IPR019758 Peptidase S26A, signal peptidase I, conserved site YPO2717 IPR019759 Peptidase S24/S26A/S26B YPO2717 IPR019766 Peptidase S26A, all-beta subdomain YPO2717 IPR028360 Peptidase S24/S26, beta-ribbon domain YPO2718 IPR000999 Ribonuclease III domain YPO2718 IPR011907 Ribonuclease III YPO2718 IPR014720 Double-stranded RNA-binding domain YPO2719 IPR004044 K Homology domain, type 2 YPO2719 IPR005225 Small GTP-binding protein domain YPO2719 IPR005662 GTP-binding protein Era YPO2719 IPR006073 GTP binding domain YPO2719 IPR009019 K homology domain, prokaryotic type YPO2719 IPR015946 K homology domain-like, alpha/beta YPO2719 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2720 IPR003717 Recombination protein O, RecO YPO2720 IPR012340 Nucleic acid-binding, OB-fold YPO2720 IPR022572 DNA replication/recombination mediator RecO, N-terminal YPO2721 IPR001584 Integrase, catalytic core YPO2721 IPR006120 Resolvase, HTH domain YPO2721 IPR009057 Homeodomain-like YPO2721 IPR012337 Ribonuclease H-like domain YPO2722 IPR001270 ClpA/B family YPO2722 IPR002611 IstB-like ATP-binding protein YPO2722 IPR003593 AAA+ ATPase domain YPO2722 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2722 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO2724 IPR009612 ImcF-related YPO2724 IPR010623 Domain of unknown function DUF1215 YPO2724 IPR017731 Type VI secretion system, IcmF YPO2724 IPR025743 ImcF-related, N-terminal domain YPO2724 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2725 IPR006531 Gp5 N-terminal YPO2725 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPO2725 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPO2727 IPR009211 Predicted virulence protein, SciE type YPO2727 IPR011990 Tetratricopeptide-like helical domain YPO2728 IPR007048 GpW/Gp25/anti-adapter protein IraD YPO2730 IPR004624 PhnA protein YPO2730 IPR013987 PhnA protein, N-terminal YPO2730 IPR013988 PhnA protein, C-terminal YPO2731 IPR018702 Protein of unknown function DUF2207, membrane YPO2732 IPR007156 LemA YPO2732 IPR023353 LemA-like domain YPO2734 IPR003439 ABC transporter-like YPO2734 IPR003593 AAA+ ATPase domain YPO2734 IPR005895 ABC transporter, haem export, CcmA YPO2734 IPR017871 ABC transporter, conserved site YPO2734 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2735 IPR003544 Cytochrome c-type biogenesis protein CcmB YPO2735 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria YPO2736 IPR002541 Cytochrome c assembly protein YPO2736 IPR003557 Cytochrome c-type biogenesis protein CcmC YPO2737 IPR007078 Haem exporter protein D (CcmD) YPO2738 IPR004329 CcmE/CycJ protein YPO2738 IPR012340 Nucleic acid-binding, OB-fold YPO2739 IPR002541 Cytochrome c assembly protein YPO2739 IPR003567 Cytochrome c-type biogenesis protein YPO2739 IPR003568 Cytochrome c-type biogenesis protein CcmF YPO2739 IPR032523 YPO2739 YPO2740 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE YPO2740 IPR012336 Thioredoxin-like fold YPO2740 IPR013740 Redoxin YPO2740 IPR017937 Thioredoxin, conserved site YPO2741 IPR005616 Cytochrome C biogenesis protein CcmH YPO2743 IPR007428 VacJ-like lipoprotein YPO2744 IPR005017 Membrane protein, aromatic hydrocarbon degradation YPO2745 IPR005272 Conserved hypothetical protein CHP00743 YPO2746 IPR002155 Thiolase YPO2746 IPR012806 Acetyl-CoA C-acyltransferase FadI YPO2746 IPR016039 Thiolase-like YPO2746 IPR020610 Thiolase, active site YPO2746 IPR020613 Thiolase, conserved site YPO2746 IPR020615 Thiolase, acyl-enzyme intermediate active site YPO2746 IPR020616 Thiolase, N-terminal YPO2746 IPR020617 Thiolase, C-terminal YPO2747 IPR001753 Crotonase superfamily YPO2747 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal YPO2747 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding YPO2747 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site YPO2747 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YPO2747 IPR012802 Fatty oxidation complex, alpha subunit FadJ YPO2747 IPR013328 Dehydrogenase, multihelical YPO2747 IPR016040 NAD(P)-binding domain YPO2747 IPR029045 ClpP/crotonase-like domain YPO2748 IPR004449 Phosphohistidine phosphatase SixA, subgroup YPO2748 IPR013078 Histidine phosphatase superfamily, clade-1 YPO2748 IPR029033 Histidine phosphatase superfamily YPO2749 IPR002625 Smr protein/MutS2 C-terminal YPO2749 IPR022990 Uncharacterised protein family UPF0115 YPO2750 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPO2750 IPR004556 Modification methylase HemK YPO2750 IPR007848 Methyltransferase small domain YPO2750 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase YPO2750 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPO2751 IPR000453 Chorismate synthase YPO2751 IPR020541 Chorismate synthase, conserved site YPO2752 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase YPO2752 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain YPO2753 IPR002781 Transmembrane protein TauE like YPO2754 IPR007411 Protein of unknown function DUF462 YPO2755 IPR014987 Uncharacterised protein family YfcL YPO2755 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal YPO2756 IPR006076 FAD dependent oxidoreductase YPO2756 IPR008471 MnmC-like methyltransferase YPO2756 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal YPO2756 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC YPO2756 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPO2756 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPO2757 IPR014030 Beta-ketoacyl synthase, N-terminal YPO2757 IPR014031 Beta-ketoacyl synthase, C-terminal YPO2757 IPR016039 Thiolase-like YPO2757 IPR018201 Beta-ketoacyl synthase, active site YPO2757 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain YPO2758 IPR001920 Asp/Glu racemase YPO2758 IPR004380 Aspartate racemase YPO2758 IPR015942 Asp/Glu/hydantoin racemase YPO2758 IPR018187 Asp/Glu racemase, active site YPO2759 IPR000259 Fimbrial-type adhesion domain YPO2759 IPR008966 Adhesion domain YPO2760 IPR023597 Flagellar regulator Flk YPO2761 IPR000620 Drug/metabolite transporter YPO2762 IPR003313 AraC-type arabinose-binding/dimerisation domain YPO2762 IPR009057 Homeodomain-like YPO2762 IPR011051 RmlC-like cupin domain YPO2762 IPR014710 RmlC-like jelly roll fold YPO2762 IPR018060 DNA binding HTH domain, AraC-type YPO2762 IPR018062 HTH domain AraC-type, conserved site YPO2762 IPR020449 Transcription regulator HTH, AraC- type YPO2763 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPO2763 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain YPO2763 IPR016040 NAD(P)-binding domain YPO2763 IPR020921 Erythronate-4-phosphate dehydrogenase YPO2763 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain YPO2763 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YPO2763 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YPO2764 IPR002686 Transposase IS200-like YPO2765 IPR000534 Semialdehyde dehydrogenase, NAD-binding YPO2765 IPR012080 Aspartate-semialdehyde dehydrogenase YPO2765 IPR012280 Semialdehyde dehydrogenase, dimerisation domain YPO2765 IPR016040 NAD(P)-binding domain YPO2766 IPR001406 Pseudouridine synthase I, TruA YPO2766 IPR020094 Pseudouridine synthase I, TruA, N-terminal YPO2766 IPR020095 Pseudouridine synthase I, TruA, C-terminal YPO2766 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain YPO2766 IPR020103 Pseudouridine synthase, catalytic domain YPO2767 IPR032816 YPO2767 YPO2767 IPR032818 YPO2767 YPO2768 IPR000022 Carboxyl transferase YPO2768 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit YPO2768 IPR029045 ClpP/crotonase-like domain YPO2769 IPR001645 Folylpolyglutamate synthetase YPO2769 IPR004101 Mur ligase, C-terminal YPO2769 IPR013221 Mur ligase, central YPO2769 IPR018109 Folylpolyglutamate synthetase, conserved site YPO2770 IPR007730 Sporulation-related domain YPO2770 IPR032898 YPO2770 YPO2771 IPR003825 Colicin V production, CvpA YPO2772 IPR000836 Phosphoribosyltransferase domain YPO2772 IPR005854 Amidophosphoribosyl transferase YPO2772 IPR029055 Nucleophile aminohydrolases, N-terminal YPO2772 IPR029057 Phosphoribosyltransferase-like YPO2773 IPR003382 Flavoprotein YPO2773 IPR004507 Decarboxylase UbiX/Pad1 YPO2774 IPR001638 Extracellular solute-binding protein, family 3 YPO2774 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein YPO2774 IPR018313 Extracellular solute-binding protein, family 3, conserved site YPO2775 IPR000515 MetI-like domain YPO2775 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family YPO2775 IPR030199 YPO2775 YPO2776 IPR000515 MetI-like domain YPO2776 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family YPO2777 IPR003439 ABC transporter-like YPO2777 IPR003593 AAA+ ATPase domain YPO2777 IPR017871 ABC transporter, conserved site YPO2777 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2777 IPR030679 YPO2777 YPO2778 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain YPO2778 IPR010099 Sugar nucleotide epimerase YfcH,-like putative YPO2778 IPR013549 Domain of unknown function DUF1731 YPO2778 IPR016040 NAD(P)-binding domain YPO2779 IPR001633 EAL domain YPO2780 IPR000979 Phosphodiesterase MJ0936/Vps29 YPO2780 IPR020935 Phosphodiesterase YfcE, conserved site YPO2780 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type YPO2780 IPR029052 Metallo-dependent phosphatase-like YPO2781 IPR000086 NUDIX hydrolase domain YPO2781 IPR015797 NUDIX hydrolase domain-like YPO2781 IPR024195 NUDIX hydrolase, YfcD, predicted YPO2782 IPR004703 Phosphotransferase system, sugar-specific permease component YPO2783 IPR001207 Transposase, mutator type YPO2784 IPR001460 Penicillin-binding protein, transpeptidase YPO2784 IPR009647 Penicillin-binding, C-terminal YPO2784 IPR011815 Penicillin-binding protein 1C YPO2784 IPR012338 Beta-lactamase/transpeptidase-like YPO2785 IPR010982 Lambda repressor-like, DNA-binding domain YPO2790 IPR010665 Protein of unknown function DUF1240 YPO2792 IPR010665 Protein of unknown function DUF1240 YPO2793 IPR008514 Type VI secretion system effector, Hcp YPO2796 IPR003991 Pertactin virulence factor family YPO2796 IPR004899 Pertactin, central region YPO2796 IPR005546 Autotransporter beta-domain YPO2796 IPR006315 Outer membrane autotransporter barrel YPO2796 IPR011050 Pectin lyase fold/virulence factor YPO2796 IPR012332 P22 tailspike C-terminal domain-like YPO2797 IPR021561 Protein of unknown function DUF2893 YPO2797 IPR033455 YPO2797 YPO2799 IPR001207 Transposase, mutator type YPO2801 IPR018677 Protein of unknown function DUF2157, membrane YPO2801 IPR025513 Domain of unknown function DUF4401 YPO2802 IPR025833 GDYXXLXY protein YPO2803 IPR001764 Glycoside hydrolase, family 3, N-terminal YPO2803 IPR002772 Glycoside hydrolase family 3 C-terminal domain YPO2803 IPR017853 Glycoside hydrolase, superfamily YPO2803 IPR019800 Glycoside hydrolase, family 3, active site YPO2803 IPR026891 Fibronectin type III-like domain YPO2803 IPR026892 Glycoside hydrolase family 3 YPO2805 IPR001395 Aldo/keto reductase YPO2805 IPR018170 Aldo/keto reductase, conserved site YPO2805 IPR020471 Aldo/keto reductase subgroup YPO2805 IPR023210 NADP-dependent oxidoreductase domain YPO2806 IPR001395 Aldo/keto reductase YPO2806 IPR023210 NADP-dependent oxidoreductase domain YPO2807 IPR000847 Transcription regulator HTH, LysR YPO2807 IPR005119 LysR, substrate-binding YPO2807 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2808 IPR001584 Integrase, catalytic core YPO2808 IPR006120 Resolvase, HTH domain YPO2808 IPR009057 Homeodomain-like YPO2808 IPR012337 Ribonuclease H-like domain YPO2809 IPR001270 ClpA/B family YPO2809 IPR002611 IstB-like ATP-binding protein YPO2809 IPR003593 AAA+ ATPase domain YPO2809 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2809 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO2813 IPR000340 Dual specificity phosphatase, catalytic domain YPO2813 IPR003595 Protein-tyrosine phosphatase, catalytic YPO2813 IPR020422 Dual specificity phosphatase, subgroup, catalytic domain YPO2813 IPR024950 Dual specificity phosphatase YPO2813 IPR026841 YPO2813 YPO2813 IPR029021 Protein-tyrosine phosphatase-like YPO2814 IPR022742 Putative lysophospholipase YPO2814 IPR022744 Methyltransferase domain, putative YPO2814 IPR029058 Alpha/Beta hydrolase fold YPO2814 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPO2815 IPR002123 Phospholipid/glycerol acyltransferase YPO2816 IPR000374 Phosphatidate cytidylyltransferase YPO2817 IPR000462 CDP-alcohol phosphatidyltransferase YPO2823 IPR010260 Bacteriophage P4, Orf88 YPO2824 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase YPO2824 IPR016040 NAD(P)-binding domain YPO2824 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain YPO2824 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain YPO2824 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site YPO2825 IPR002942 RNA-binding S4 domain YPO2826 IPR002686 Transposase IS200-like YPO2827 IPR005765 Uracil phosphoribosyl transferase YPO2827 IPR029057 Phosphoribosyltransferase-like YPO2828 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase YPO2828 IPR010918 AIR synthase-related protein, C-terminal domain YPO2828 IPR016188 PurM, N-terminal-like YPO2829 IPR001555 Phosphoribosylglycinamide formyltransferase, active site YPO2829 IPR002376 Formyl transferase, N-terminal YPO2829 IPR004607 Phosphoribosylglycinamide formyltransferase YPO2830 IPR000182 GNAT domain YPO2830 IPR016181 Acyl-CoA N-acyltransferase YPO2833 IPR003439 ABC transporter-like YPO2833 IPR003593 AAA+ ATPase domain YPO2833 IPR005670 Phosphate transport system permease protein 1 YPO2833 IPR017871 ABC transporter, conserved site YPO2833 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2834 IPR000515 MetI-like domain YPO2834 IPR005672 Phosphate transport system permease protein PstA YPO2835 IPR000515 MetI-like domain YPO2835 IPR015943 WD40/YVTN repeat-like-containing domain YPO2836 IPR003414 Polyphosphate kinase YPO2836 IPR024953 Polyphosphate kinase middle domain YPO2836 IPR025198 Polyphosphate kinase N-terminal domain YPO2836 IPR025200 Polyphosphate kinase C-terminal domain YPO2837 IPR003695 Ppx/GppA phosphatase YPO2837 IPR022371 Exopolyphosphatase YPO2837 IPR030673 YPO2837 YPO2838 IPR022576 Protein of unknown function DUF2633 YPO2839 IPR000644 CBS domain YPO2839 IPR006667 SLC41 divalent cation transporters, integral membrane domain YPO2839 IPR006668 Magnesium transporter, MgtE intracellular domain YPO2839 IPR006669 Magnesium transporter MgtE YPO2840 IPR013126 Heat shock protein 70 family YPO2840 IPR018181 Heat shock protein 70, conserved site YPO2841 IPR000515 MetI-like domain YPO2842 IPR000515 MetI-like domain YPO2844 IPR004632 4-aminobutyrate aminotransferase, bacterial YPO2844 IPR005814 Aminotransferase class-III YPO2844 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPO2844 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPO2844 IPR015424 Pyridoxal phosphate-dependent transferase YPO2845 IPR000524 Transcription regulator HTH, GntR YPO2845 IPR004839 Aminotransferase, class I/classII YPO2845 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2845 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPO2845 IPR015424 Pyridoxal phosphate-dependent transferase YPO2846 IPR003439 ABC transporter-like YPO2846 IPR003593 AAA+ ATPase domain YPO2846 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit YPO2846 IPR008995 Molybdate/tungstate binding, C-terminal YPO2846 IPR013611 Transport-associated OB, type 2 YPO2846 IPR017871 ABC transporter, conserved site YPO2846 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2847 IPR006143 RND efflux pump, membrane fusion protein YPO2847 IPR022824 Multidrug resistance protein MdtA YPO2848 IPR001036 Acriflavin resistance protein YPO2848 IPR022831 Multidrug resistance protein MdtB YPO2848 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPO2849 IPR001036 Acriflavin resistance protein YPO2849 IPR023931 Multidrug resistance protein MdtC YPO2849 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPO2850 IPR004638 Drug resistance transporter EmrB/QacA subfamily YPO2850 IPR011701 Major facilitator superfamily YPO2850 IPR020846 Major facilitator superfamily domain YPO2850 IPR023721 Multidrug resistance protein MdtD, putative YPO2853 IPR001789 Signal transduction response regulator, receiver domain YPO2853 IPR001867 Signal transduction response regulator, C-terminal YPO2853 IPR011006 CheY-like superfamily YPO2853 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2854 IPR010879 Domain of unknown function DUF1508 YPO2855 IPR001539 Peptidase U32 YPO2855 IPR032525 YPO2855 YPO2856 IPR001206 Diacylglycerol kinase, catalytic domain YPO2856 IPR005218 Diacylglycerol/lipid kinase YPO2856 IPR016064 ATP-NAD kinase-like domain YPO2856 IPR022433 Lipid kinase YegS YPO2857 IPR014453 Inhibitor of vertebrate lysozyme YPO2859 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase YPO2859 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase YPO2859 IPR029056 Ribokinase-like YPO2860 IPR010351 Protein of unknown function DUF943 YPO2862 IPR001207 Transposase, mutator type YPO2864 IPR010665 Protein of unknown function DUF1240 YPO2865 IPR010665 Protein of unknown function DUF1240 YPO2866 IPR010665 Protein of unknown function DUF1240 YPO2867 IPR010665 Protein of unknown function DUF1240 YPO2868 IPR008514 Type VI secretion system effector, Hcp YPO2869 IPR002686 Transposase IS200-like YPO2870 IPR001674 GMP synthase, C-terminal YPO2870 IPR004739 GMP synthase, N-terminal YPO2870 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO2870 IPR017926 Glutamine amidotransferase YPO2870 IPR022310 NAD/GMP synthase YPO2870 IPR022955 GMP synthase YPO2870 IPR029062 Class I glutamine amidotransferase-like YPO2871 IPR000644 CBS domain YPO2871 IPR001093 IMP dehydrogenase/GMP reductase YPO2871 IPR005990 Inosine-5'-monophosphate dehydrogenase YPO2871 IPR013785 Aldolase-type TIM barrel YPO2871 IPR015875 IMP dehydrogenase / GMP reductase, conserved site YPO2872 IPR003753 Exonuclease VII, large subunit YPO2872 IPR020579 Exonuclease VII, large subunit, C-terminal YPO2872 IPR025824 OB-fold nucleic acid binding domain YPO2873 IPR010807 Protein of unknown function DUF1407 YPO2873 IPR029037 YfgJ-like YPO2874 IPR004776 Auxin efflux carrier YPO2875 IPR005225 Small GTP-binding protein domain YPO2875 IPR006073 GTP binding domain YPO2875 IPR015946 K homology domain-like, alpha/beta YPO2875 IPR016484 GTP-binding protein EngA YPO2875 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2875 IPR032859 YPO2875 YPO2876 IPR002372 Pyrrolo-quinoline quinone repeat YPO2876 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily YPO2876 IPR017687 Outer membrane protein assembly factor BamB YPO2876 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat YPO2876 IPR027295 Quinonprotein alcohol dehydrogenase-like domain YPO2877 IPR011990 Tetratricopeptide-like helical domain YPO2877 IPR018704 Domain of unknown function DUF09976 YPO2877 IPR026039 Uncharacterised protein family UPF0070 YPO2878 IPR004154 Anticodon-binding YPO2878 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit YPO2878 IPR015807 Histidine-tRNA ligase YPO2879 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type YPO2879 IPR013785 Aldolase-type TIM barrel YPO2879 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial YPO2879 IPR029065 Enolase C-terminal domain-like YPO2880 IPR001387 Cro/C1-type helix-turn-helix domain YPO2880 IPR010982 Lambda repressor-like, DNA-binding domain YPO2880 IPR023690 Cytoskeleton protein RodZ YPO2880 IPR025194 Domain of unknown function DUF4115 YPO2881 IPR011990 Tetratricopeptide-like helical domain YPO2881 IPR013360 Pilus biogenesis/stability type IV, PilW YPO2881 IPR019734 Tetratricopeptide repeat YPO2882 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr YPO2882 IPR007197 Radical SAM YPO2882 IPR013785 Aldolase-type TIM barrel YPO2882 IPR027492 Dual-specificity RNA methyltransferase RlmN YPO2883 IPR001564 Nucleoside diphosphate kinase YPO2883 IPR023005 Nucleoside diphosphate kinase, active site YPO2884 IPR001064 Beta/gamma crystallin YPO2884 IPR011024 Gamma-crystallin-related YPO2884 IPR013320 Concanavalin A-like lectin/glucanase, subgroup YPO2884 IPR015059 Calcium-dependent cell adhesion molecule, N-terminal YPO2884 IPR015185 Exotoxin A, binding YPO2884 IPR016181 Acyl-CoA N-acyltransferase YPO2886 IPR004899 Pertactin, central region YPO2886 IPR005546 Autotransporter beta-domain YPO2886 IPR006315 Outer membrane autotransporter barrel YPO2886 IPR011050 Pectin lyase fold/virulence factor YPO2886 IPR012332 P22 tailspike C-terminal domain-like YPO2886 IPR030930 YPO2886 YPO2888 IPR009839 SseB protein N-terminal domain YPO2888 IPR027945 SseB protein, C-terminal YPO2889 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal YPO2889 IPR008330 Peptidase M17, peptidase B YPO2889 IPR011356 Leucine aminopeptidase/peptidase B YPO2890 IPR007479 ISC system FeS cluster assembly, IscX YPO2891 IPR001041 2Fe-2S ferredoxin-type domain YPO2891 IPR001055 Adrenodoxin YPO2891 IPR011536 Ferredoxin, 2Fe-2S type YPO2891 IPR012675 Beta-grasp domain YPO2891 IPR018298 Adrenodoxin, iron-sulphur binding site YPO2892 IPR010236 ISC system FeS cluster assembly, HscA chaperone YPO2892 IPR013126 Heat shock protein 70 family YPO2892 IPR018181 Heat shock protein 70, conserved site YPO2892 IPR029047 Heat shock protein 70kD, peptide-binding domain YPO2892 IPR029048 Heat shock protein 70kD, C-terminal domain YPO2893 IPR001623 DnaJ domain YPO2893 IPR004640 Co-chaperone Hsc20 YPO2893 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain YPO2894 IPR000361 FeS cluster biogenesis YPO2894 IPR011302 ISC system FeS cluster assembly, IscA scaffold YPO2894 IPR016092 FeS cluster insertion protein YPO2894 IPR017870 FeS cluster insertion, C-terminal, conserved site YPO2895 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal YPO2895 IPR011339 ISC system FeS cluster assembly, IscU scaffold YPO2896 IPR000192 Aminotransferase class V domain YPO2896 IPR010240 Cysteine desulfurase YPO2896 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPO2896 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPO2896 IPR015424 Pyridoxal phosphate-dependent transferase YPO2896 IPR016454 Cysteine desulfurase, NifS YPO2896 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site YPO2897 IPR000944 Transcription regulator Rrf2-like YPO2897 IPR010242 Transcription factor HTH, IscR YPO2897 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2897 IPR030489 YPO2897 YPO2898 IPR001537 tRNA/rRNA methyltransferase, SpoU type YPO2898 IPR004384 RNA methyltransferase TrmH, group 1 YPO2898 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPO2898 IPR029028 Alpha/beta knot methyltransferases YPO2899 IPR000760 Inositol monophosphatase YPO2899 IPR020550 Inositol monophosphatase, conserved site YPO2899 IPR020583 Inositol monophosphatase, metal-binding site YPO2899 IPR022337 Inositol monophosphatase, SuhB YPO2900 IPR002686 Transposase IS200-like YPO2901 IPR011541 Nickel/cobalt transporter, high-affinity YPO2902 IPR010412 Protein of unknown function DUF1007 YPO2902 IPR016537 Uncharacterised conserved protein UCP008159, YPO2903 IPR011608 PRD domain YPO2904 IPR020846 Major facilitator superfamily domain YPO2904 IPR024989 Major facilitator superfamily associated domain YPO2904 IPR026032 Phenylproprionate/maltose permease YPO2905 IPR000758 Virulence-related outer membrane protein YPO2905 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel YPO2905 IPR027385 Outer membrane protein beta-barrel YPO2907 IPR001085 Serine hydroxymethyltransferase YPO2907 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPO2907 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPO2907 IPR015424 Pyridoxal phosphate-dependent transferase YPO2907 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site YPO2908 IPR000971 Globin YPO2908 IPR001221 Phenol hydroxylase reductase YPO2908 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPO2908 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase YPO2908 IPR008333 Oxidoreductase, FAD-binding domain YPO2908 IPR009050 Globin-like YPO2908 IPR012292 Globin, structural domain YPO2908 IPR017938 Riboflavin synthase-like beta-barrel YPO2908 IPR023950 Flavohemoprotein YPO2911 IPR002187 Nitrogen regulatory protein PII YPO2911 IPR002332 Nitrogen regulatory protein P-II, urydylation site YPO2911 IPR011322 Nitrogen regulatory PII-like, alpha/beta YPO2911 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal YPO2911 IPR017918 Nitrogen regulatory protein PII, conserved site YPO2912 IPR000132 Nitrilase/cyanide hydratase, conserved site YPO2912 IPR003010 Carbon-nitrogen hydrolase YPO2912 IPR003694 NAD(+) synthetase YPO2912 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO2912 IPR022310 NAD/GMP synthase YPO2914 IPR001789 Signal transduction response regulator, receiver domain YPO2914 IPR002078 RNA polymerase sigma factor 54 interaction domain YPO2914 IPR003593 AAA+ ATPase domain YPO2914 IPR009057 Homeodomain-like YPO2914 IPR011006 CheY-like superfamily YPO2914 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 YPO2914 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 YPO2914 IPR025944 Sigma-54 interaction domain, conserved site YPO2914 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2915 IPR025262 Quorum-sensing regulator protein G YPO2916 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO2916 IPR003660 HAMP linker domain YPO2916 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPO2916 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPO2917 IPR002686 Transposase IS200-like YPO2921 IPR010073 Phosphoribosylformylglycinamidine synthase YPO2921 IPR010918 AIR synthase-related protein, C-terminal domain YPO2921 IPR016188 PurM, N-terminal-like YPO2921 IPR029062 Class I glutamine amidotransferase-like YPO2922 IPR000189 Prokaryotic transglycosylase, active site YPO2922 IPR001638 Extracellular solute-binding protein, family 3 YPO2922 IPR008258 Lytic transglycosylase-like SLT domain YPO2922 IPR023346 Lysozyme-like domain YPO2922 IPR023703 Membrane-bound lytic murein transglycosylase F YPO2923 IPR016192 APOBEC/CMP deaminase, zinc-binding YPO2923 IPR016193 Cytidine deaminase-like YPO2923 IPR028883 tRNA-specific adenosine deaminase YPO2924 IPR006435 HAD-superfamily hydrolase, subfamily IF, YfhB YPO2924 IPR023214 HAD-like domain YPO2925 IPR001347 Sugar isomerase (SIS) YPO2925 IPR005486 Glucokinase regulatory protein, conserved site YPO2925 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ YPO2925 IPR009060 UBA-like YPO2926 IPR000281 Helix-turn-helix protein RpiR YPO2926 IPR001347 Sugar isomerase (SIS) YPO2926 IPR009057 Homeodomain-like YPO2926 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2927 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPO2927 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO2928 IPR002686 Transposase IS200-like YPO2929 IPR002582 Holo-[acyl carrier protein] synthase YPO2929 IPR004568 Phosphopantethiene-protein transferase domain YPO2929 IPR008278 4'-phosphopantetheinyl transferase superfamily YPO2930 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ YPO2930 IPR013785 Aldolase-type TIM barrel YPO2931 IPR001270 ClpA/B family YPO2931 IPR002611 IstB-like ATP-binding protein YPO2931 IPR003593 AAA+ ATPase domain YPO2931 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2931 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO2932 IPR001584 Integrase, catalytic core YPO2932 IPR006120 Resolvase, HTH domain YPO2932 IPR009057 Homeodomain-like YPO2932 IPR012337 Ribonuclease H-like domain YPO2933 IPR017732 Type IV / VI secretion system, DotU YPO2934 IPR010263 Protein of unknown function DUF876 YPO2935 IPR017734 Type VI secretion system, lipoprotein SciN YPO2937 IPR008514 Type VI secretion system effector, Hcp YPO2938 IPR010269 Protein of unknown function DUF877 YPO2939 IPR008312 Uncharacterised conserved protein UCP028301 YPO2940 IPR000259 Fimbrial-type adhesion domain YPO2940 IPR008966 Adhesion domain YPO2942 IPR001207 Transposase, mutator type YPO2944 IPR001829 Pili assembly chaperone, bacterial YPO2944 IPR008962 PapD-like YPO2944 IPR016147 PapD, N-terminal, bacterial YPO2944 IPR016148 Pili assembly chaperone, C-terminal domain YPO2944 IPR018046 Pili assembly chaperone, conserved site YPO2945 IPR000259 Fimbrial-type adhesion domain YPO2945 IPR008966 Adhesion domain YPO2946 IPR001270 ClpA/B family YPO2946 IPR003593 AAA+ ATPase domain YPO2946 IPR003959 ATPase, AAA-type, core YPO2946 IPR004176 Clp, N-terminal YPO2946 IPR017729 Type VI secretion system, ATPase ClpV1 YPO2946 IPR018368 ClpA/B, conserved site 1 YPO2946 IPR019489 Clp ATPase, C-terminal YPO2946 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2946 IPR028299 ClpA/B, conserved site 2 YPO2947 IPR010272 Type VI secretion system, VCA0110 YPO2948 IPR010732 Protein of unknown function DUF1305 YPO2949 IPR010657 ImpA, N-terminal YPO2950 IPR000259 Fimbrial-type adhesion domain YPO2950 IPR008966 Adhesion domain YPO2951 IPR021067 Glycosyltransferase, GlcNAc YPO2951 IPR029044 Nucleotide-diphospho-sugar transferases YPO2953 IPR006664 Outer membrane protein, bacterial YPO2953 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal YPO2954 IPR014894 Protein DcrB YPO2954 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich YPO2955 IPR000792 Transcription regulator LuxR, C-terminal YPO2955 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2955 IPR016032 Signal transduction response regulator, C-terminal effector YPO2957 IPR011757 Lytic transglycosylase MltB YPO2957 IPR023346 Lysozyme-like domain YPO2957 IPR031304 YPO2957 YPO2958 IPR006061 Bacterial extracellular solute-binding family 1, conserved site YPO2958 IPR026045 Ferric binding protein YPO2959 IPR000515 MetI-like domain YPO2960 IPR003439 ABC transporter-like YPO2960 IPR003593 AAA+ ATPase domain YPO2960 IPR008995 Molybdate/tungstate binding, C-terminal YPO2960 IPR017871 ABC transporter, conserved site YPO2960 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO2961 IPR014591 Uncharacterised conserved protein UCP034455 YPO2961 IPR021125 Protein of unknown function DUF2127 YPO2962 IPR008514 Type VI secretion system effector, Hcp YPO2963 IPR025320 Protein of unknown function DUF4225 YPO2965 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site YPO2965 IPR006656 Molybdopterin oxidoreductase YPO2965 IPR006657 Molydopterin dinucleotide-binding domain YPO2965 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain YPO2965 IPR009010 Aspartate decarboxylase-like domain YPO2965 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE YPO2965 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal YPO2965 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site YPO2966 IPR014297 Dimethylsulphoxide reductase, chain B YPO2966 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPO2966 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO2967 IPR007059 DMSO reductase anchor subunit (DmsC) YPO2968 IPR020945 DMSO/Nitrate reductase chaperone YPO2968 IPR026269 Tat proofreading chaperone DmsD-type YPO2969 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPO2969 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO2970 IPR008517 Protein of unknown function DUF799 YPO2971 IPR014508 Uncharacterised conserved protein, TPR-like repeat YPO2972 IPR005534 Curli production assembly/transport component CsgG YPO2972 IPR007195 TolB, N-terminal YPO2973 IPR032753 YPO2973 YPO2974 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase YPO2974 IPR016174 Di-haem cytochrome, transmembrane YPO2975 IPR004839 Aminotransferase, class I/classII YPO2975 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPO2975 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPO2975 IPR015424 Pyridoxal phosphate-dependent transferase YPO2976 IPR010856 Protein of unknown function DUF1479 YPO2976 IPR027443 Isopenicillin N synthase-like YPO2977 IPR003836 Glucokinase YPO2978 IPR007896 Transmembrane pair, bacterial YPO2979 IPR000847 Transcription regulator HTH, LysR YPO2979 IPR005119 LysR, substrate-binding YPO2979 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2980 IPR001395 Aldo/keto reductase YPO2980 IPR023210 NADP-dependent oxidoreductase domain YPO2981 IPR019638 Protein of unknown function DUF2502 YPO2982 IPR001046 NRAMP family YPO2983 IPR002668 Concentrative nucleoside transporter N-terminal domain YPO2983 IPR008276 Concentrative nucleoside transporter YPO2983 IPR011642 Nucleoside recognition Gate YPO2983 IPR011657 Concentrative nucleoside transporter C-terminal domain YPO2984 IPR000924 Glutamyl/glutaminyl-tRNA synthetase YPO2984 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPO2984 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial YPO2984 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding YPO2984 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO2984 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain YPO2984 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain YPO2984 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 YPO2985 IPR002686 Transposase IS200-like YPO2986 IPR009267 Protein of unknown function DUF925 YPO2987 IPR025577 FlxA-like protein YPO2988 IPR024530 Protein of unknown function DUF3820 YPO2989 IPR001357 BRCT domain YPO2989 IPR001679 NAD-dependent DNA ligase YPO2989 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 YPO2989 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type YPO2989 IPR004150 NAD-dependent DNA ligase, OB-fold YPO2989 IPR010994 RuvA domain 2-like YPO2989 IPR012340 Nucleic acid-binding, OB-fold YPO2989 IPR013839 NAD-dependent DNA ligase, adenylation YPO2989 IPR013840 NAD-dependent DNA ligase, N-terminal YPO2989 IPR018239 NAD-dependent DNA ligase, active site YPO2989 IPR033136 YPO2989 YPO2990 IPR007449 ZipA, C-terminal FtsZ-binding domain YPO2990 IPR011919 Cell division protein ZipA YPO2991 IPR022985 CysZ, gammaproteobacteria YPO2992 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site YPO2992 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPO2992 IPR005856 Cysteine synthase K/M YPO2992 IPR005859 Cysteine synthase A YPO2993 IPR000032 Phosphocarrier HPr protein-like YPO2993 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site YPO2993 IPR002114 Phosphotransferase system, HPr serine phosphorylation site YPO2994 IPR000121 PEP-utilising enzyme, C-terminal YPO2994 IPR006318 Phosphoenolpyruvate-utilising enzyme YPO2994 IPR008279 PEP-utilising enzyme, mobile domain YPO2994 IPR008731 Phosphotransferase system, enzyme I N-terminal YPO2994 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain YPO2994 IPR018274 PEP-utilising enzyme, active site YPO2994 IPR023151 PEP-utilising enzyme, conserved site YPO2994 IPR024692 Phosphotransferase system, enzyme I YPO2995 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 YPO2995 IPR011055 Duplicated hybrid motif YPO2996 IPR002686 Transposase IS200-like YPO2997 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO2997 IPR003660 HAMP linker domain YPO2997 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPO2997 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPO2998 IPR001789 Signal transduction response regulator, receiver domain YPO2998 IPR001867 Signal transduction response regulator, C-terminal YPO2998 IPR011006 CheY-like superfamily YPO2998 IPR011991 Winged helix-turn-helix DNA-binding domain YPO2998 IPR016032 Signal transduction response regulator, C-terminal effector YPO2999 IPR006143 RND efflux pump, membrane fusion protein YPO2999 IPR032317 YPO2999 YPO3000 IPR003439 ABC transporter-like YPO3000 IPR003593 AAA+ ATPase domain YPO3000 IPR003838 Permease FtsX-like YPO3000 IPR017871 ABC transporter, conserved site YPO3000 IPR025857 MacB-like periplasmic core domain YPO3000 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3001 IPR001763 Rhodanese-like domain YPO3001 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YPO3001 IPR016156 FAD/NAD-linked reductase, dimerisation domain YPO3001 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPO3002 IPR001734 Sodium/solute symporter YPO3003 IPR021741 Protein of unknown function DUF3311 YPO3004 IPR000587 Creatinase, N-terminal YPO3004 IPR000994 Peptidase M24, structural domain YPO3004 IPR028980 Creatinase/Aminopeptidase P, N-terminal YPO3006 IPR004839 Aminotransferase, class I/classII YPO3006 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPO3006 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPO3006 IPR015424 Pyridoxal phosphate-dependent transferase YPO3006 IPR027619 Putative C-S lyase YPO3007 IPR002035 von Willebrand factor, type A YPO3008 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO3008 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPO3008 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPO3009 IPR001789 Signal transduction response regulator, receiver domain YPO3009 IPR001867 Signal transduction response regulator, C-terminal YPO3009 IPR011006 CheY-like superfamily YPO3009 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3009 IPR016032 Signal transduction response regulator, C-terminal effector YPO3010 IPR032675 YPO3010 YPO3011 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site YPO3011 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPO3011 IPR005856 Cysteine synthase K/M YPO3011 IPR005858 Cysteine synthase B YPO3012 IPR003439 ABC transporter-like YPO3012 IPR003593 AAA+ ATPase domain YPO3012 IPR005666 Sulphate transport system permease protein 1 YPO3012 IPR008995 Molybdate/tungstate binding, C-terminal YPO3012 IPR017871 ABC transporter, conserved site YPO3012 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3013 IPR000515 MetI-like domain YPO3013 IPR005667 Sulphate ABC transporter permease protein 2 YPO3013 IPR011866 Sulphate ABC transporter, permease protein CysW YPO3014 IPR000515 MetI-like domain YPO3014 IPR005667 Sulphate ABC transporter permease protein 2 YPO3014 IPR011865 Sulphate ABC transporter, permease protein CysT YPO3015 IPR005669 Thiosulphate/Sulfate-binding protein YPO3016 IPR004742 Sialic acid transporter YPO3016 IPR011701 Major facilitator superfamily YPO3016 IPR020846 Major facilitator superfamily domain YPO3017 IPR000281 Helix-turn-helix protein RpiR YPO3017 IPR001347 Sugar isomerase (SIS) YPO3017 IPR009057 Homeodomain-like YPO3017 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3019 IPR004375 Conserved hypothetical protein CHP00022 YPO3020 IPR000600 ROK YPO3020 IPR023945 N-acetylmannosamine kinase, bacterial YPO3023 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase YPO3023 IPR011060 Ribulose-phosphate binding barrel YPO3023 IPR013785 Aldolase-type TIM barrel YPO3024 IPR002220 DapA-like YPO3024 IPR013785 Aldolase-type TIM barrel YPO3024 IPR020624 Dihydrodipicolinate synthetase, conserved site YPO3025 IPR006314 Dyp-type peroxidase YPO3025 IPR011008 Dimeric alpha-beta barrel YPO3026 IPR010938 Protein of unknown function DUF1131 YPO3027 IPR005220 Viral OB-fold, YgiW YPO3027 IPR016052 Bacteriophage 933W, L0136 YPO3028 IPR003991 Pertactin virulence factor family YPO3028 IPR004899 Pertactin, central region YPO3028 IPR005546 Autotransporter beta-domain YPO3028 IPR006315 Outer membrane autotransporter barrel YPO3028 IPR011050 Pectin lyase fold/virulence factor YPO3028 IPR012332 P22 tailspike C-terminal domain-like YPO3031 IPR000182 GNAT domain YPO3031 IPR016181 Acyl-CoA N-acyltransferase YPO3031 IPR023072 Acetyltransferase, YpeA YPO3032 IPR001260 Coproporphyrinogen III oxidase, aerobic YPO3032 IPR018375 Coproporphyrinogen III oxidase, conserved site YPO3033 IPR003791 Protein of unknown function UPF0178 YPO3034 IPR002505 Phosphate acetyl/butaryl transferase YPO3034 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase YPO3034 IPR012301 Malic enzyme, N-terminal domain YPO3034 IPR012302 Malic enzyme, NAD-binding YPO3034 IPR015884 Malic enzyme, conserved site YPO3034 IPR016040 NAD(P)-binding domain YPO3035 IPR000086 NUDIX hydrolase domain YPO3035 IPR004385 Nucleoside diphosphate pyrophosphatase YPO3035 IPR015797 NUDIX hydrolase domain-like YPO3036 IPR005126 NapC/NirT cytochrome c, N-terminal YPO3036 IPR011031 Multihaem cytochrome YPO3036 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT YPO3036 IPR024717 Denitrification system component NapC/NirT/NrfH YPO3037 IPR005591 Nitrate reductase cytochrome c-type subunit NapB YPO3037 IPR011031 Multihaem cytochrome YPO3037 IPR027406 Periplasmic nitrate reductase NapB subunit, heme binding domain YPO3038 IPR006656 Molybdopterin oxidoreductase YPO3038 IPR006657 Molydopterin dinucleotide-binding domain YPO3038 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain YPO3038 IPR009010 Aspartate decarboxylase-like domain YPO3038 IPR010051 Periplasmic nitrate reductase, large subunit YPO3038 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal YPO3038 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site YPO3039 IPR005623 Chaperone NapD, nitrate reductase assembly YPO3040 IPR004496 Ferredoxin-type protein NapF YPO3040 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPO3040 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO3041 IPR000792 Transcription regulator LuxR, C-terminal YPO3041 IPR001789 Signal transduction response regulator, receiver domain YPO3041 IPR011006 CheY-like superfamily YPO3041 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3041 IPR016032 Signal transduction response regulator, C-terminal effector YPO3042 IPR017162 Uncharacterised conserved protein UCP037266 YPO3043 IPR001036 Acriflavin resistance protein YPO3043 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 YPO3043 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPO3045 IPR007404 Protein of unknown function DUF457 YPO3046 IPR007197 Radical SAM YPO3046 IPR013785 Aldolase-type TIM barrel YPO3046 IPR023867 Anaerobic sulphatase maturase, radical SAM YPO3046 IPR023885 4Fe4S-binding SPASM domain YPO3047 IPR000917 Sulfatase YPO3047 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha YPO3047 IPR017850 Alkaline-phosphatase-like, core domain YPO3047 IPR024607 Sulfatase, conserved site YPO3048 IPR003439 ABC transporter-like YPO3048 IPR003593 AAA+ ATPase domain YPO3048 IPR008995 Molybdate/tungstate binding, C-terminal YPO3048 IPR017871 ABC transporter, conserved site YPO3048 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3049 IPR000515 MetI-like domain YPO3051 IPR011990 Tetratricopeptide-like helical domain YPO3052 IPR006504 Transcriptional regulator Spx/MgsR YPO3052 IPR006660 Arsenate reductase-like YPO3052 IPR012336 Thioredoxin-like fold YPO3053 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site YPO3053 IPR002933 Peptidase M20 YPO3053 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria YPO3053 IPR011650 Peptidase M20, dimerisation domain YPO3054 IPR003709 Peptidase M15B/M15C YPO3054 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain YPO3055 IPR020910 Uncharacterised protein family UPF0370 YPO3056 IPR000182 GNAT domain YPO3056 IPR007807 Helicase domain YPO3056 IPR013562 Domain of unknown function DUF1726 YPO3056 IPR016181 Acyl-CoA N-acyltransferase YPO3056 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA YPO3056 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3056 IPR032672 YPO3056 YPO3056 IPR033442 YPO3056 YPO3057 IPR007382 Uncharacterised protein family UPF0756, transmembrame YPO3058 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative YPO3059 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase YPO3059 IPR013816 ATP-grasp fold, subdomain 2 YPO3059 IPR018236 SAICAR synthetase, conserved site YPO3059 IPR028923 SAICAR synthetase/ADE2, N-terminal YPO3060 IPR002686 Transposase IS200-like YPO3061 IPR010653 Lipoprotein, NlpB YPO3061 IPR014524 Outer membrane protein assembly factor BamC YPO3062 IPR002220 DapA-like YPO3062 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA YPO3062 IPR013785 Aldolase-type TIM barrel YPO3062 IPR020624 Dihydrodipicolinate synthetase, conserved site YPO3062 IPR020625 Dihydrodipicolinate synthetase, active site YPO3063 IPR016867 Glycine cleavage repressor GcvR YPO3064 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant YPO3064 IPR012336 Thioredoxin-like fold YPO3064 IPR024706 Peroxiredoxin, AhpC-type YPO3068 IPR002549 Uncharacterised protein family UPF0118 YPO3069 IPR001915 Peptidase M48 YPO3069 IPR011716 Tetratricopeptide TPR-3 YPO3069 IPR011990 Tetratricopeptide-like helical domain YPO3069 IPR030873 YPO3069 YPO3070 IPR006659 Arsenate reductase YPO3070 IPR006660 Arsenate reductase-like YPO3070 IPR012336 Thioredoxin-like fold YPO3071 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) YPO3071 IPR017788 DnaA regulatory inactivator Hda YPO3071 IPR020591 Chromosomal replication control, initiator DnaA-like YPO3071 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae YPO3071 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3072 IPR002686 Transposase IS200-like YPO3073 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding YPO3073 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO3073 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR YPO3073 IPR015803 Cysteine-tRNA ligase YPO3073 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase YPO3073 IPR032678 YPO3073 YPO3074 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain YPO3074 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site YPO3074 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase YPO3074 IPR029000 Cyclophilin-like domain YPO3075 IPR004843 Calcineurin-like phosphoesterase domain, apaH type YPO3075 IPR010138 UDP-2,3-diacylglucosamine hydrolase YPO3075 IPR029052 Metallo-dependent phosphatase-like YPO3076 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain YPO3076 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE YPO3077 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type YPO3077 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit YPO3077 IPR011054 Rudiment single hybrid motif YPO3077 IPR013816 ATP-grasp fold, subdomain 2 YPO3077 IPR016185 Pre-ATP-grasp domain YPO3078 IPR003838 Permease FtsX-like YPO3079 IPR003439 ABC transporter-like YPO3079 IPR003593 AAA+ ATPase domain YPO3079 IPR017871 ABC transporter, conserved site YPO3079 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3080 IPR008265 Lipase, GDSL, active site YPO3080 IPR013830 YPO3080 YPO3081 IPR002347 Glucose/ribitol dehydrogenase YPO3081 IPR016040 NAD(P)-binding domain YPO3081 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPO3082 IPR005746 Thioredoxin YPO3082 IPR011990 Tetratricopeptide-like helical domain YPO3082 IPR012336 Thioredoxin-like fold YPO3082 IPR013766 Thioredoxin domain YPO3083 IPR001107 Band 7 protein YPO3083 IPR001972 Stomatin family YPO3083 IPR018080 Band 7/stomatin-like, conserved site YPO3084 IPR002810 NfeD-like, C-terminal domain YPO3084 IPR012340 Nucleic acid-binding, OB-fold YPO3085 IPR000551 MerR-type HTH domain YPO3085 IPR009061 DNA binding domain, putative YPO3085 IPR011789 Cu(I)-responsive transcriptional regulator YPO3086 IPR001757 Cation-transporting P-type ATPase YPO3086 IPR006121 Heavy metal-associated domain, HMA YPO3086 IPR008250 P-type ATPase, A domain YPO3086 IPR017969 Heavy-metal-associated, conserved site YPO3086 IPR018303 P-type ATPase, phosphorylation site YPO3086 IPR023214 HAD-like domain YPO3086 IPR023299 P-type ATPase, cytoplasmic domain N YPO3086 IPR027256 Cation-transporting P-type ATPase, subfamily IB YPO3087 IPR002816 Pheromone shutdown, TraB YPO3088 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC YPO3088 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain YPO3093 IPR011701 Major facilitator superfamily YPO3093 IPR020846 Major facilitator superfamily domain YPO3094 IPR003148 Regulator of K+ conductance, N-terminal YPO3094 IPR004771 K+/H+ exchanger YPO3094 IPR006153 Cation/H+ exchanger YPO3094 IPR016040 NAD(P)-binding domain YPO3095 IPR011611 Carbohydrate kinase PfkB YPO3095 IPR029056 Ribokinase-like YPO3096 IPR003856 Lipopolysaccharide biosynthesis YPO3097 IPR005841 Alpha-D-phosphohexomutase superfamily YPO3097 IPR005843 Alpha-D-phosphohexomutase, C-terminal YPO3097 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I YPO3097 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II YPO3097 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III YPO3097 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III YPO3097 IPR016066 Alpha-D-phosphohexomutase, conserved site YPO3098 IPR001173 Glycosyltransferase 2-like YPO3098 IPR029044 Nucleotide-diphospho-sugar transferases YPO3099 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal YPO3099 IPR005835 Nucleotidyl transferase YPO3099 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YPO3099 IPR011051 RmlC-like cupin domain YPO3099 IPR014710 RmlC-like jelly roll fold YPO3099 IPR029044 Nucleotide-diphospho-sugar transferases YPO3104 IPR001296 Glycosyl transferase, family 1 YPO3104 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain YPO3111 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPO3112 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain YPO3112 IPR016040 NAD(P)-binding domain YPO3113 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase YPO3113 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPO3113 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPO3113 IPR015424 Pyridoxal phosphate-dependent transferase YPO3115 IPR005835 Nucleotidyl transferase YPO3115 IPR013446 Glucose-1-phosphate cytidylyltransferase YPO3115 IPR029044 Nucleotide-diphospho-sugar transferases YPO3116 IPR001041 2Fe-2S ferredoxin-type domain YPO3116 IPR001221 Phenol hydroxylase reductase YPO3116 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPO3116 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site YPO3116 IPR008333 Oxidoreductase, FAD-binding domain YPO3116 IPR012675 Beta-grasp domain YPO3116 IPR017938 Riboflavin synthase-like beta-barrel YPO3117 IPR001015 Ferrochelatase YPO3117 IPR019772 Ferrochelatase, active site YPO3118 IPR000850 Adenylate kinase/UMP-CMP kinase YPO3118 IPR006259 Adenylate kinase subfamily YPO3118 IPR007862 Adenylate kinase, active site lid domain YPO3118 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3119 IPR001404 Heat shock protein Hsp90 family YPO3119 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO3119 IPR019805 Heat shock protein Hsp90, conserved site YPO3119 IPR020568 Ribosomal protein S5 domain 2-type fold YPO3119 IPR020575 Heat shock protein Hsp90, N-terminal YPO3120 IPR000093 DNA recombination protein RecR YPO3120 IPR006171 Toprim domain YPO3120 IPR015967 Recombination protein RecR, conserved site YPO3120 IPR023627 Recombination protein RecR YPO3120 IPR023628 Recombination protein RecR, C4-type zinc finger YPO3121 IPR004401 Nucleoid-associated protein YbaB YPO3122 IPR001270 ClpA/B family YPO3122 IPR003593 AAA+ ATPase domain YPO3122 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal YPO3122 IPR012763 DNA polymerase III, subunit gamma/ tau YPO3122 IPR021029 DNA polymerase III, tau subunit, domain V YPO3122 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV YPO3122 IPR022754 DNA polymerase III, gamma subunit, domain III YPO3122 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3123 IPR000836 Phosphoribosyltransferase domain YPO3123 IPR005764 Adenine phosphoribosyl transferase YPO3123 IPR029057 Phosphoribosyltransferase-like YPO3125 IPR001584 Integrase, catalytic core YPO3125 IPR002611 IstB-like ATP-binding protein YPO3125 IPR003593 AAA+ ATPase domain YPO3125 IPR006120 Resolvase, HTH domain YPO3125 IPR009057 Homeodomain-like YPO3125 IPR012337 Ribonuclease H-like domain YPO3125 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3126 IPR007401 Protein of unknown function DUF454 YPO3127 IPR010890 Primosomal replication PriB/PriC YPO3128 IPR019630 Protein of unknown function DUF2496, YbaM-related YPO3129 IPR006685 Mechanosensitive ion channel MscS YPO3129 IPR006686 Mechanosensitive ion channel MscS, conserved site YPO3129 IPR010920 Like-Sm (LSM) domain YPO3129 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 YPO3129 IPR011066 Mechanosensitive ion channel MscS, C-terminal YPO3129 IPR024393 Mechanosensitive ion channel MscS, porin domain YPO3129 IPR025692 Mechanosensitive ion channel inner membrane domain 1 YPO3130 IPR003787 Sulphur relay, DsrE/F-like protein YPO3130 IPR027396 DsrEFH-like YPO3131 IPR001647 DNA-binding HTH domain, TetR-type YPO3131 IPR009057 Homeodomain-like YPO3131 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal YPO3131 IPR013572 Transcription regulator MAATS, C-terminal YPO3131 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal YPO3131 IPR023772 DNA-binding HTH domain, TetR-type, conserved site YPO3132 IPR006143 RND efflux pump, membrane fusion protein YPO3132 IPR032317 YPO3132 YPO3133 IPR001036 Acriflavin resistance protein YPO3133 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 YPO3133 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPO3134 IPR002150 Ribosomal protein L31 YPO3134 IPR027493 Ribosomal protein L31 type B YPO3135 IPR000473 Ribosomal protein L36 YPO3137 IPR019693 Biofilm formation regulator YbaJ YPO3138 IPR007985 Haemolysin expression modulating, HHA YPO3139 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3139 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding YPO3141 IPR003703 Acyl-CoA thioesterase YPO3141 IPR029069 HotDog domain YPO3142 IPR001905 Ammonium transporter YPO3142 IPR018047 Ammonium transporter, conserved site YPO3142 IPR024041 Ammonium transporter AmtB-like domain YPO3142 IPR029020 Ammonium/urea transporter YPO3143 IPR002187 Nitrogen regulatory protein PII YPO3143 IPR002332 Nitrogen regulatory protein P-II, urydylation site YPO3143 IPR011322 Nitrogen regulatory PII-like, alpha/beta YPO3143 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal YPO3143 IPR017918 Nitrogen regulatory protein PII, conserved site YPO3144 IPR003439 ABC transporter-like YPO3144 IPR003593 AAA+ ATPase domain YPO3144 IPR011527 ABC transporter type 1, transmembrane domain YPO3144 IPR017871 ABC transporter, conserved site YPO3144 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3145 IPR003439 ABC transporter-like YPO3145 IPR003593 AAA+ ATPase domain YPO3145 IPR011527 ABC transporter type 1, transmembrane domain YPO3145 IPR017871 ABC transporter, conserved site YPO3145 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3146 IPR000485 AsnC-type HTH domain YPO3146 IPR011008 Dimeric alpha-beta barrel YPO3146 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3146 IPR019887 Transcription regulator AsnC-type, C-terminal YPO3146 IPR019888 Transcription regulator AsnC-type YPO3147 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPO3148 IPR000150 Cof protein YPO3148 IPR006379 HAD-superfamily hydrolase, subfamily IIB YPO3148 IPR023214 HAD-like domain YPO3148 IPR023938 HMP-PP phosphatase YPO3149 IPR000914 Bacterial extracellular solute-binding protein, family 5 YPO3149 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain YPO3150 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO3150 IPR018317 Queuosine biosynthesis protein QueC YPO3151 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family YPO3151 IPR029069 HotDog domain YPO3152 IPR004509 Competence protein ComEA, helix-hairpin-helix domain YPO3152 IPR010994 RuvA domain 2-like YPO3153 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type YPO3153 IPR008880 Trigger factor, C-terminal domain YPO3153 IPR027304 Trigger factor/SurA domain YPO3154 IPR000119 Histone-like bacterial DNA-binding protein YPO3154 IPR010992 Integration host factor (IHF)-like DNA-binding domain YPO3154 IPR020816 Histone-like DNA-binding protein, conserved site YPO3155 IPR003111 Peptidase S16, lon N-terminal YPO3155 IPR003593 AAA+ ATPase domain YPO3155 IPR003959 ATPase, AAA-type, core YPO3155 IPR004815 Lon protease, bacterial/eukaryotic-type YPO3155 IPR008268 Peptidase S16, active site YPO3155 IPR008269 Peptidase S16, Lon C-terminal YPO3155 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPO3155 IPR015947 PUA-like domain YPO3155 IPR020568 Ribosomal protein S5 domain 2-type fold YPO3155 IPR027065 Lon protease YPO3155 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3155 IPR027543 Lon protease, bacterial YPO3156 IPR003593 AAA+ ATPase domain YPO3156 IPR003959 ATPase, AAA-type, core YPO3156 IPR004487 Clp protease, ATP-binding subunit ClpX YPO3156 IPR010603 Zinc finger, ClpX C4-type YPO3156 IPR019489 Clp ATPase, C-terminal YPO3156 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3157 IPR001907 ATP-dependent Clp protease proteolytic subunit YPO3157 IPR018215 ClpP, active site YPO3157 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA YPO3157 IPR029045 ClpP/crotonase-like domain YPO3157 IPR033135 YPO3157 YPO3158 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain YPO3158 IPR005215 Trigger factor YPO3158 IPR008880 Trigger factor, C-terminal domain YPO3158 IPR008881 Trigger factor, ribosome-binding, bacterial YPO3158 IPR027304 Trigger factor/SurA domain YPO3160 IPR002634 BolA protein YPO3161 IPR005619 Uncharacterised protein family, YajG YPO3161 IPR012640 Membrane lipoprotein, lipid attachment site YPO3162 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 YPO3162 IPR011701 Major facilitator superfamily YPO3162 IPR020846 Major facilitator superfamily domain YPO3163 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like YPO3164 IPR006333 Cytochrome o ubiquinol oxidase subunit II YPO3164 IPR008972 Cupredoxin YPO3164 IPR010514 COX aromatic rich motif YPO3164 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain YPO3165 IPR000883 Cytochrome c oxidase subunit I YPO3165 IPR014207 Cytochrome o ubiquinol oxidase, subunit I YPO3165 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site YPO3165 IPR023616 Cytochrome c oxidase, subunit I domain YPO3166 IPR000298 Cytochrome c oxidase subunit III domain YPO3166 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle YPO3166 IPR014206 Cytochrome o ubiquinol oxidase, subunit III YPO3166 IPR024791 Cytochrome c oxidase subunit III YPO3167 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes YPO3167 IPR014210 Cytochrome o ubiquinol oxidase subunit IV YPO3168 IPR000537 UbiA prenyltransferase family YPO3168 IPR006369 Protohaem IX farnesyltransferase YPO3168 IPR030470 YPO3168 YPO3169 IPR011701 Major facilitator superfamily YPO3169 IPR020846 Major facilitator superfamily domain YPO3170 IPR007551 Protein of unknown function DUF520 YPO3171 IPR003710 Ketopantoate reductase ApbA/PanE YPO3171 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YPO3171 IPR013328 Dehydrogenase, multihelical YPO3171 IPR013332 Ketopantoate reductase, N-terminal domain YPO3171 IPR013752 Ketopantoate reductase, C-terminal domain YPO3171 IPR016040 NAD(P)-binding domain YPO3172 IPR002818 ThiJ/PfpI YPO3172 IPR006287 DJ-1 YPO3172 IPR029062 Class I glutamine amidotransferase-like YPO3173 IPR001763 Rhodanese-like domain YPO3173 IPR003720 tRNA sulfurtransferase ThiI YPO3173 IPR004114 THUMP YPO3173 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO3173 IPR020536 Thil, AANH domain YPO3173 IPR026340 Thiazole biosynthesis domain YPO3175 IPR003761 Exonuclease VII, small subunit YPO3176 IPR000092 Polyprenyl synthetase YPO3176 IPR008949 Terpenoid synthase YPO3176 IPR017446 Polyprenyl synthetase-related YPO3177 IPR005474 Transketolase, N-terminal YPO3177 IPR005475 Transketolase-like, pyrimidine-binding domain YPO3177 IPR005477 Deoxyxylulose-5-phosphate synthase YPO3177 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II YPO3177 IPR020826 Transketolase binding site YPO3177 IPR029061 Thiamin diphosphate-binding fold YPO3177 IPR033247 YPO3177 YPO3177 IPR033248 YPO3177 YPO3178 IPR002686 Transposase IS200-like YPO3179 IPR007686 YutG/PgpA domain YPO3179 IPR026037 Phosphatidylglycerophosphatase A YPO3179 IPR027416 YutG-like domain YPO3180 IPR006283 Thiamine-monophosphate kinase YPO3180 IPR010918 AIR synthase-related protein, C-terminal domain YPO3180 IPR016188 PurM, N-terminal-like YPO3181 IPR006027 NusB/RsmB/TIM44 YPO3181 IPR011605 NusB antitermination factor YPO3182 IPR002180 6,7-dimethyl-8-ribityllumazine synthase YPO3183 IPR002125 CMP/dCMP deaminase, zinc-binding YPO3183 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal YPO3183 IPR004794 Riboflavin biosynthesis protein RibD YPO3183 IPR011549 Riboflavin-specific deaminase, C-terminal YPO3183 IPR016192 APOBEC/CMP deaminase, zinc-binding YPO3183 IPR016193 Cytidine deaminase-like YPO3183 IPR024072 Dihydrofolate reductase-like domain YPO3184 IPR003796 Ribonucleotide reductase regulator NrdR-like YPO3184 IPR005144 ATP-cone YPO3187 IPR002686 Transposase IS200-like YPO3188 IPR005665 Protein-export membrane protein SecF, bacterial YPO3188 IPR022645 Protein-export membrane protein SecD/SecF, bacterial YPO3188 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site YPO3188 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial YPO3189 IPR005791 Protein translocase subunit SecD YPO3189 IPR022645 Protein-export membrane protein SecD/SecF, bacterial YPO3189 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site YPO3189 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial YPO3189 IPR027398 SecD export protein N-terminal TM domain YPO3190 IPR003849 Preprotein translocase YajC YPO3191 IPR002616 tRNA-guanine(15) transglycosylase-like YPO3191 IPR004803 Queuine tRNA-ribosyltransferase YPO3192 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA YPO3193 IPR007431 Acyl carrier protein phosphodiesterase YPO3193 IPR023491 Acyl carrier protein phosphodiesterase, gammaproteobacteria YPO3194 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant YPO3194 IPR012336 Thioredoxin-like fold YPO3194 IPR019479 Peroxiredoxin, C-terminal YPO3194 IPR024706 Peroxiredoxin, AhpC-type YPO3195 IPR002686 Transposase IS200-like YPO3199 IPR002347 Glucose/ribitol dehydrogenase YPO3199 IPR016040 NAD(P)-binding domain YPO3200 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain YPO3200 IPR006047 Glycosyl hydrolase, family 13, catalytic domain YPO3200 IPR013780 Glycosyl hydrolase, family 13, all-beta YPO3200 IPR013781 Glycoside hydrolase, catalytic domain YPO3200 IPR014756 Immunoglobulin E-set YPO3200 IPR015902 Glycoside hydrolase, family 13 YPO3200 IPR017069 Maltodextrin glucosidase YPO3200 IPR017853 Glycoside hydrolase, superfamily YPO3201 IPR002293 Amino acid/polyamine transporter I YPO3201 IPR004840 Amino acid permease, conserved site YPO3201 IPR004841 Amino acid permease/ SLC12A domain YPO3202 IPR004685 Branched-chain amino acid transport system II carrier protein YPO3203 IPR011862 Phosphate binding protein YPO3203 IPR024370 PBP domain YPO3204 IPR000014 PAS domain YPO3204 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO3204 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPO3204 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPO3204 IPR013767 PAS fold YPO3204 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR YPO3204 IPR021766 Protein of unknown function DUF3329 YPO3205 IPR001789 Signal transduction response regulator, receiver domain YPO3205 IPR001867 Signal transduction response regulator, C-terminal YPO3205 IPR011006 CheY-like superfamily YPO3205 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB YPO3205 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3205 IPR016032 Signal transduction response regulator, C-terminal effector YPO3206 IPR004593 Nuclease SbcCD subunit D YPO3206 IPR004843 Calcineurin-like phosphoesterase domain, apaH type YPO3206 IPR026843 Nuclease SbcCD subunit D, C-terminal domain YPO3206 IPR029052 Metallo-dependent phosphatase-like YPO3207 IPR027050 Nuclease SbcCD subunit C YPO3207 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3208 IPR001270 ClpA/B family YPO3208 IPR002611 IstB-like ATP-binding protein YPO3208 IPR003593 AAA+ ATPase domain YPO3208 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3208 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO3209 IPR001584 Integrase, catalytic core YPO3209 IPR006120 Resolvase, HTH domain YPO3209 IPR009057 Homeodomain-like YPO3209 IPR012337 Ribonuclease H-like domain YPO3211 IPR000600 ROK YPO3212 IPR007476 Putative exonuclease, RdgC YPO3213 IPR009664 Protein of unknown function DUF1255 YPO3213 IPR011051 RmlC-like cupin domain YPO3213 IPR014710 RmlC-like jelly roll fold YPO3215 IPR000623 Shikimate kinase/Threonine synthase-like 1 YPO3215 IPR023000 Shikimate kinase, conserved site YPO3215 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3215 IPR027544 Shikimate kinase 2 YPO3215 IPR031322 YPO3215 YPO3216 IPR001737 Ribosomal RNA adenine methylase transferase YPO3216 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPO3218 IPR013216 Methyltransferase type 11 YPO3218 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPO3220 IPR009875 PilZ domain YPO3220 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal YPO3220 IPR012349 FMN-binding split barrel YPO3220 IPR023787 Type III secretion system flagellar brake protein YcgR YPO3221 IPR000965 Gamma-glutamyl phosphate reductase GPR YPO3221 IPR012134 Glutamate-5-semialdehyde dehydrogenase YPO3221 IPR015590 Aldehyde dehydrogenase domain YPO3221 IPR016161 Aldehyde/histidinol dehydrogenase YPO3221 IPR016162 Aldehyde dehydrogenase, N-terminal YPO3221 IPR016163 Aldehyde dehydrogenase, C-terminal YPO3221 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site YPO3222 IPR001048 Aspartate/glutamate/uridylate kinase YPO3222 IPR001057 Glutamate/acetylglutamate kinase YPO3222 IPR002478 PUA domain YPO3222 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase YPO3222 IPR011529 Glutamate 5-kinase YPO3222 IPR015947 PUA-like domain YPO3222 IPR019797 Glutamate 5-kinase, conserved site YPO3223 IPR009986 Sigma factor-binding protein Crl YPO3224 IPR010520 Protein of unknown function DUF1100, hydrolase-like YPO3224 IPR029058 Alpha/Beta hydrolase fold YPO3225 IPR000836 Phosphoribosyltransferase domain YPO3225 IPR023747 Xanthine-guanine phosphoribosyltransferase YPO3225 IPR029057 Phosphoribosyltransferase-like YPO3226 IPR032126 YPO3226 YPO3227 IPR000601 PKD domain YPO3227 IPR004302 Chitin-binding, domain 3 YPO3227 IPR014756 Immunoglobulin E-set YPO3227 IPR022409 PKD/Chitinase domain YPO3228 IPR000847 Transcription regulator HTH, LysR YPO3228 IPR005119 LysR, substrate-binding YPO3228 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3230 IPR001160 Peptidase M20C, Xaa-His dipeptidase YPO3230 IPR002933 Peptidase M20 YPO3230 IPR011650 Peptidase M20, dimerisation domain YPO3231 IPR001126 DNA-repair protein, UmuC-like YPO3231 IPR017961 DNA polymerase, Y-family, little finger domain YPO3231 IPR022880 DNA polymerase IV YPO3231 IPR024728 DNA polymerase type-Y, HhH motif YPO3232 IPR004129 Glycerophosphoryl diester phosphodiesterase YPO3232 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain YPO3232 IPR030395 YPO3232 YPO3233 IPR007495 Protein of unknown function DUF539 YPO3234 IPR003374 ApbE-like domain YPO3234 IPR024932 Flavin transferase ApbE YPO3235 IPR001041 2Fe-2S ferredoxin-type domain YPO3235 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPO3235 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase YPO3235 IPR008333 Oxidoreductase, FAD-binding domain YPO3235 IPR010205 NADH-quinone reductase, Na(+)-translocating, F subunit YPO3235 IPR012675 Beta-grasp domain YPO3235 IPR017938 Riboflavin synthase-like beta-barrel YPO3236 IPR003667 Electron transport complex, Rnf/Nqr YPO3236 IPR010967 NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit YPO3237 IPR003667 Electron transport complex, Rnf/Nqr YPO3237 IPR011292 NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit YPO3238 IPR007329 FMN-binding YPO3238 IPR010204 NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit YPO3239 IPR004338 NADH-quinone reductase NQR2/RnfD YPO3239 IPR010966 NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit YPO3240 IPR008703 NADH-quinone reductase, Na(+)-translocating, subunit A YPO3240 IPR022615 NADH-quinone reductase, Na(+)-translocating, subunit A, C-terminal YPO3241 IPR005490 L,D-transpeptidase catalytic domain YPO3242 IPR026869 Putative glutamine amidotransferase type 2 YPO3242 IPR029055 Nucleophile aminohydrolases, N-terminal YPO3243 IPR001347 Sugar isomerase (SIS) YPO3243 IPR004515 Phosphoheptose isomerase YPO3244 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal YPO3244 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain YPO3244 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal YPO3244 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type YPO3245 IPR004356 Adhesin operon regulatory protein YPO3247 IPR006626 Parallel beta-helix repeat YPO3247 IPR008638 Filamentous haemagglutinin, N-terminal YPO3247 IPR011050 Pectin lyase fold/virulence factor YPO3247 IPR012334 Pectin lyase fold YPO3247 IPR024973 ESPR domain YPO3248 IPR013686 Polypeptide-transport-associated, ShlB-type YPO3249 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site YPO3249 IPR002933 Peptidase M20 YPO3249 IPR010158 Amidase, hydantoinase/carbamoylase YPO3249 IPR011650 Peptidase M20, dimerisation domain YPO3251 IPR001584 Integrase, catalytic core YPO3251 IPR006120 Resolvase, HTH domain YPO3251 IPR009057 Homeodomain-like YPO3251 IPR012337 Ribonuclease H-like domain YPO3252 IPR001270 ClpA/B family YPO3252 IPR002611 IstB-like ATP-binding protein YPO3252 IPR003593 AAA+ ATPase domain YPO3252 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3252 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO3254 IPR003439 ABC transporter-like YPO3254 IPR003593 AAA+ ATPase domain YPO3254 IPR017871 ABC transporter, conserved site YPO3254 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3254 IPR030679 YPO3254 YPO3255 IPR000515 MetI-like domain YPO3255 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family YPO3256 IPR000515 MetI-like domain YPO3256 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family YPO3257 IPR001638 Extracellular solute-binding protein, family 3 YPO3257 IPR018313 Extracellular solute-binding protein, family 3, conserved site YPO3259 IPR000281 Helix-turn-helix protein RpiR YPO3259 IPR001347 Sugar isomerase (SIS) YPO3259 IPR009057 Homeodomain-like YPO3259 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3260 IPR025148 Protein of unknown function DUF4089 YPO3261 IPR000120 Amidase YPO3261 IPR014087 Amidohydrolase, AtzE type YPO3261 IPR023631 Amidase signature domain YPO3262 IPR024507 Protein of unknown function DUF3225 YPO3262 IPR032710 YPO3262 YPO3263 IPR011701 Major facilitator superfamily YPO3263 IPR020846 Major facilitator superfamily domain YPO3264 IPR011606 Branched-chain amino acid transport, permease YPO3265 IPR008407 Branched-chain amino acid transport, AzlD YPO3266 IPR000835 MarR-type HTH domain YPO3266 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3266 IPR023187 Transcriptional regulator MarR-type, conserved site YPO3267 IPR005694 Efflux pump membrane protein Emr YPO3267 IPR006143 RND efflux pump, membrane fusion protein YPO3267 IPR032317 YPO3267 YPO3268 IPR004638 Drug resistance transporter EmrB/QacA subfamily YPO3268 IPR011701 Major facilitator superfamily YPO3268 IPR020846 Major facilitator superfamily domain YPO3269 IPR001537 tRNA/rRNA methyltransferase, SpoU type YPO3269 IPR013123 RNA 2-O ribose methyltransferase, substrate binding YPO3269 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted YPO3269 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPO3269 IPR029028 Alpha/beta knot methyltransferases YPO3269 IPR029064 50S ribosomal protein L30e-like YPO3270 IPR005746 Thioredoxin YPO3270 IPR012336 Thioredoxin-like fold YPO3270 IPR013766 Thioredoxin domain YPO3270 IPR017937 Thioredoxin, conserved site YPO3271 IPR005636 DTW YPO3272 IPR000182 GNAT domain YPO3272 IPR003781 CoA-binding YPO3272 IPR016040 NAD(P)-binding domain YPO3272 IPR016102 Succinyl-CoA synthetase-like YPO3272 IPR016181 Acyl-CoA N-acyltransferase YPO3272 IPR032875 YPO3272 YPO3273 IPR001736 Phospholipase D/Transphosphatidylase YPO3273 IPR016270 Phospholipase D, phosphatidylserine synthase type YPO3273 IPR025202 Phospholipase D-like domain YPO3274 IPR017028 Uncharacterised conserved protein UCP034456 YPO3274 IPR018736 Protein of unknown function DUF2279, periplasmic lipoprotein YPO3275 IPR001270 ClpA/B family YPO3275 IPR003593 AAA+ ATPase domain YPO3275 IPR003959 ATPase, AAA-type, core YPO3275 IPR004176 Clp, N-terminal YPO3275 IPR017730 Chaperonin ClpB YPO3275 IPR018368 ClpA/B, conserved site 1 YPO3275 IPR019489 Clp ATPase, C-terminal YPO3275 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3275 IPR028299 ClpA/B, conserved site 2 YPO3276 IPR003730 Multi-copper polyphenol oxidoreductase, laccase YPO3276 IPR011324 Cytotoxic necrotizing factor-like, catalytic YPO3277 IPR002942 RNA-binding S4 domain YPO3277 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F YPO3277 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site YPO3277 IPR006225 Pseudouridine synthase, RluC/RluD YPO3277 IPR020103 Pseudouridine synthase, catalytic domain YPO3278 IPR011990 Tetratricopeptide-like helical domain YPO3278 IPR017689 Outer membrane protein assembly factor BamD YPO3279 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein YPO3280 IPR002686 Transposase IS200-like YPO3282 IPR001584 Integrase, catalytic core YPO3282 IPR006120 Resolvase, HTH domain YPO3282 IPR009057 Homeodomain-like YPO3282 IPR012337 Ribonuclease H-like domain YPO3283 IPR001270 ClpA/B family YPO3283 IPR002611 IstB-like ATP-binding protein YPO3283 IPR003593 AAA+ ATPase domain YPO3283 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3283 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO3285 IPR002701 Chorismate mutase YPO3285 IPR003099 Prephenate dehydrogenase YPO3285 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein YPO3285 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YPO3285 IPR011277 Chorismate mutase, T-protein YPO3285 IPR016040 NAD(P)-binding domain YPO3285 IPR020822 Chorismate mutase, type II YPO3286 IPR006218 DAHP synthetase I/KDSA YPO3286 IPR006219 DHAP synthase, class 1 YPO3286 IPR013785 Aldolase-type TIM barrel YPO3287 IPR001789 Signal transduction response regulator, receiver domain YPO3287 IPR007492 LytTR DNA-binding domain YPO3287 IPR011006 CheY-like superfamily YPO3290 IPR007433 Protein of unknown function DUF481 YPO3291 IPR002686 Transposase IS200-like YPO3292 IPR001857 Ribosomal protein L19 YPO3292 IPR008991 Translation protein SH3-like domain YPO3292 IPR018257 Ribosomal protein L19, conserved site YPO3293 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria YPO3293 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain YPO3293 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal YPO3293 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal YPO3293 IPR029028 Alpha/beta knot methyltransferases YPO3294 IPR002676 RimM protein YPO3294 IPR009000 Translation protein, beta-barrel domain YPO3294 IPR011033 PRC-barrel-like YPO3294 IPR011961 16S rRNA processing protein RimM YPO3294 IPR027275 PRC-barrel domain YPO3295 IPR000307 Ribosomal protein S16 YPO3295 IPR020592 Ribosomal protein S16, conserved site YPO3295 IPR023803 Ribosomal protein S16 domain YPO3296 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain YPO3296 IPR003593 AAA+ ATPase domain YPO3296 IPR004125 Signal recognition particle, SRP54 subunit, M-domain YPO3296 IPR004780 Signal recognition particle protein Ffh YPO3296 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle YPO3296 IPR022941 Signal recognition particle, SRP54 subunit YPO3296 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3297 IPR002541 Cytochrome c assembly protein YPO3298 IPR000644 CBS domain YPO3298 IPR002550 Domain of unknown function DUF21 YPO3298 IPR005170 Transporter-associated domain YPO3298 IPR016166 FAD-binding, type 2 YPO3298 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 YPO3299 IPR002686 Transposase IS200-like YPO3300 IPR003815 S-ribosylhomocysteinase (LuxS) YPO3300 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like YPO3301 IPR006334 Glutamate--cysteine ligase, monofunctional YPO3301 IPR007370 Glutamate--cysteine ligase YPO3302 IPR020143 Uncharacterised protein family, RP436 YPO3302 IPR032818 YPO3302 YPO3303 IPR006439 HAD hydrolase, subfamily IA YPO3303 IPR010976 Beta-phosphoglucomutase hydrolase YPO3303 IPR023198 Phosphoglycolate phosphatase, domain 2 YPO3303 IPR023214 HAD-like domain YPO3304 IPR003751 Carbon storage regulator YPO3305 IPR002318 Alanine-tRNA ligase, class IIc YPO3305 IPR003156 DHHA1 domain YPO3305 IPR009000 Translation protein, beta-barrel domain YPO3305 IPR012947 Threonyl/alanyl tRNA synthetase, SAD YPO3305 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain YPO3305 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain YPO3305 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal YPO3305 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria YPO3306 IPR003783 Regulatory protein RecX YPO3306 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3307 IPR003593 AAA+ ATPase domain YPO3307 IPR013765 DNA recombination and repair protein RecA YPO3307 IPR020584 DNA recombination/repair protein RecA, conserved site YPO3307 IPR023400 DNA recombination and repair protein RecA, C-terminal YPO3307 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3308 IPR008136 CinA, C-terminal YPO3309 IPR011701 Major facilitator superfamily YPO3309 IPR020846 Major facilitator superfamily domain YPO3310 IPR000835 MarR-type HTH domain YPO3310 IPR007324 Sugar-binding domain, putative YPO3310 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3311 IPR009015 L-fucose isomerase, N-terminal/central domain YPO3311 IPR015888 L-fucose isomerase, C-terminal YPO3312 IPR000577 YPO3312 YPO3312 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPO3312 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPO3313 IPR005475 Transketolase-like, pyrimidine-binding domain YPO3313 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II YPO3313 IPR029061 Thiamin diphosphate-binding fold YPO3313 IPR033247 YPO3313 YPO3313 IPR033248 YPO3313 YPO3314 IPR005474 Transketolase, N-terminal YPO3314 IPR029061 Thiamin diphosphate-binding fold YPO3314 IPR033247 YPO3314 YPO3315 IPR001851 ABC transporter, permease YPO3316 IPR003439 ABC transporter-like YPO3316 IPR003593 AAA+ ATPase domain YPO3316 IPR017871 ABC transporter, conserved site YPO3316 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3317 IPR014582 Uncharacterised conserved protein UCP033535, periplasmic lipoprotein YPO3318 IPR025997 Periplasmic binding protein domain YPO3318 IPR028082 Periplasmic binding protein-like I YPO3319 IPR000763 Catalase-peroxidase haem YPO3319 IPR002016 Haem peroxidase, plant/fungal/bacterial YPO3319 IPR010255 Haem peroxidase YPO3319 IPR019793 Peroxidases heam-ligand binding site YPO3319 IPR019794 Peroxidase, active site YPO3320 IPR009155 Cytochrome b562 YPO3320 IPR010980 Cytochrome c/b562 YPO3321 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase YPO3321 IPR016174 Di-haem cytochrome, transmembrane YPO3322 IPR020945 DMSO/Nitrate reductase chaperone YPO3322 IPR026269 Tat proofreading chaperone DmsD-type YPO3322 IPR028611 Tat proofreading chaperone DmsD YPO3323 IPR007059 DMSO reductase anchor subunit (DmsC) YPO3324 IPR014297 Dimethylsulphoxide reductase, chain B YPO3324 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPO3324 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO3325 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site YPO3325 IPR006656 Molybdopterin oxidoreductase YPO3325 IPR006657 Molydopterin dinucleotide-binding domain YPO3325 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain YPO3325 IPR009010 Aspartate decarboxylase-like domain YPO3325 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE YPO3325 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site YPO3326 IPR001303 Class II aldolase/adducin N-terminal YPO3326 IPR004661 L-ribulose-5-phosphate 4-epimerase YPO3327 IPR001034 HTH DeoR N-terminal domain YPO3327 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3327 IPR014036 DeoR C-terminal sensor domain YPO3327 IPR018356 Transcription regulator, HTH DeoR-type, conserved site YPO3328 IPR025997 Periplasmic binding protein domain YPO3328 IPR028082 Periplasmic binding protein-like I YPO3329 IPR002686 Transposase IS200-like YPO3330 IPR003439 ABC transporter-like YPO3330 IPR003593 AAA+ ATPase domain YPO3330 IPR017871 ABC transporter, conserved site YPO3330 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3331 IPR001851 ABC transporter, permease YPO3332 IPR001851 ABC transporter, permease YPO3333 IPR004560 L-ribulose-5-phosphate 3-epimerase YPO3333 IPR013022 Xylose isomerase-like, TIM barrel domain YPO3334 IPR000577 YPO3334 YPO3334 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPO3334 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPO3335 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain YPO3335 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain YPO3335 IPR011167 Iron-dependent fumarate hydratase YPO3335 IPR020557 Fumarate lyase, conserved site YPO3336 IPR021831 Protein of unknown function DUF3423 YPO3337 IPR000994 Peptidase M24, structural domain YPO3337 IPR001714 Peptidase M24, methionine aminopeptidase YPO3337 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 YPO3339 IPR012927 ShET2 enterotoxin, N-terminal YPO3342 IPR004852 Di-haem cytochrome c peroxidase YPO3342 IPR009056 Cytochrome c-like domain YPO3342 IPR025992 Haem-binding domain YPO3343 IPR001638 Extracellular solute-binding protein, family 3 YPO3345 IPR006793 FaeA-like protein YPO3345 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3346 IPR001845 HTH ArsR-type DNA-binding domain YPO3346 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3347 IPR000802 Arsenical pump membrane protein, ArsB YPO3348 IPR007324 Sugar-binding domain, putative YPO3348 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3349 IPR004007 DhaL domain YPO3349 IPR012737 Dihydroxyacetone kinase, subunit L YPO3350 IPR004006 Dak kinase YPO3351 IPR002347 Glucose/ribitol dehydrogenase YPO3351 IPR016040 NAD(P)-binding domain YPO3351 IPR020904 Short-chain dehydrogenase/reductase, conserved site YPO3352 IPR002085 Alcohol dehydrogenase superfamily, zinc-type YPO3352 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site YPO3352 IPR011032 GroES (chaperonin 10)-like YPO3352 IPR013149 Alcohol dehydrogenase, C-terminal YPO3352 IPR013154 Alcohol dehydrogenase GroES-like YPO3352 IPR016040 NAD(P)-binding domain YPO3352 IPR020843 Polyketide synthase, enoylreductase YPO3353 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family YPO3353 IPR004785 Ribose 5-phosphate isomerase B YPO3354 IPR000432 DNA mismatch repair protein MutS, C-terminal YPO3354 IPR005748 DNA mismatch repair protein MutS, type 1 YPO3354 IPR007695 DNA mismatch repair protein MutS-like, N-terminal YPO3354 IPR007696 DNA mismatch repair protein MutS, core YPO3354 IPR007860 DNA mismatch repair protein MutS, connector domain YPO3354 IPR007861 DNA mismatch repair protein MutS, clamp YPO3354 IPR016151 DNA mismatch repair protein MutS, N-terminal YPO3354 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3355 IPR000943 RNA polymerase sigma-70 YPO3355 IPR007624 RNA polymerase sigma-70 region 3 YPO3355 IPR007627 RNA polymerase sigma-70 region 2 YPO3355 IPR007630 RNA polymerase sigma-70 region 4 YPO3355 IPR009042 RNA polymerase sigma-70 region 1.2 YPO3355 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3355 IPR012761 RNA polymerase sigma factor RpoS YPO3355 IPR013324 RNA polymerase sigma factor, region 3/4 YPO3355 IPR013325 RNA polymerase sigma factor, region 2 YPO3355 IPR014284 RNA polymerase sigma-70 like domain YPO3356 IPR011055 Duplicated hybrid motif YPO3356 IPR016047 Peptidase M23 YPO3356 IPR018392 LysM domain YPO3357 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase YPO3357 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPO3358 IPR002828 Survival protein SurE-like phosphatase/nucleotidase YPO3358 IPR030048 YPO3358 YPO3359 IPR001656 Pseudouridine synthase, TruD YPO3359 IPR020103 Pseudouridine synthase, catalytic domain YPO3359 IPR020119 Pseudouridine synthase TruD, conserved site YPO3360 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YPO3360 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site YPO3361 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YPO3361 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site YPO3361 IPR029044 Nucleotide-diphospho-sugar transferases YPO3362 IPR007060 Septum formation initiator FtsL/DivIC YPO3362 IPR023081 Cell division protein FtsB YPO3363 IPR022721 Protein of unknown function DUF3561 YPO3364 IPR002891 Adenylylsulphate kinase YPO3364 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3365 IPR000795 Elongation factor, GTP-binding domain YPO3365 IPR005225 Small GTP-binding protein domain YPO3365 IPR009000 Translation protein, beta-barrel domain YPO3365 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal YPO3365 IPR011779 Sulphate adenylyltransferase, large subunit YPO3365 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3365 IPR031157 YPO3365 YPO3366 IPR002500 Phosphoadenosine phosphosulphate reductase YPO3366 IPR011784 Sulphate adenylyltransferase, small subunit YPO3366 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO3367 IPR000878 Tetrapyrrole methylase YPO3367 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site YPO3367 IPR006366 Uroporphyrin-III C-methyltransferase YPO3367 IPR006367 Sirohaem synthase, N-terminal YPO3367 IPR012409 Sirohaem synthase YPO3367 IPR014776 Tetrapyrrole methylase, subdomain 2 YPO3367 IPR014777 Tetrapyrrole methylase, subdomain 1 YPO3367 IPR016040 NAD(P)-binding domain YPO3367 IPR019478 Sirohaem synthase, dimerisation domain YPO3367 IPR028281 Siroheme synthase, central domain YPO3368a IPR012933 HicA mRNA interferase family YPO3369 IPR013321 Arc-type ribbon-helix-helix YPO3369 IPR031807 YPO3369 YPO3371 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain YPO3371 IPR006066 Nitrite/sulphite reductase iron-sulphur/siroheam-binding site YPO3371 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain YPO3371 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit YPO3372 IPR001094 Flavodoxin YPO3372 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPO3372 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase YPO3372 IPR003097 FAD-binding, type 1 YPO3372 IPR008254 Flavodoxin/nitric oxide synthase YPO3372 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain YPO3372 IPR017938 Riboflavin synthase-like beta-barrel YPO3372 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3 YPO3372 IPR029039 Flavoprotein-like YPO3372 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria YPO3373 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein YPO3374 IPR007197 Radical SAM YPO3374 IPR013785 Aldolase-type TIM barrel YPO3374 IPR024924 7-carboxy-7-deazaguanine synthase-like YPO3374 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria YPO3375 IPR001424 Superoxide dismutase, copper/zinc binding domain YPO3375 IPR018152 Superoxide dismutase, copper/zinc, binding site YPO3375 IPR024134 YPO3375 YPO3376 IPR000941 Enolase YPO3376 IPR020809 Enolase, conserved site YPO3376 IPR020810 Enolase, C-terminal YPO3376 IPR020811 Enolase, N-terminal YPO3376 IPR029017 Enolase N-terminal domain-like YPO3376 IPR029065 Enolase C-terminal domain-like YPO3377 IPR004468 CTP synthase YPO3377 IPR017456 CTP synthase, N-terminal YPO3377 IPR017926 Glutamine amidotransferase YPO3377 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3377 IPR029062 Class I glutamine amidotransferase-like YPO3378 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core YPO3378 IPR011551 NTP pyrophosphohydrolase MazG, bacterial YPO3380 IPR002912 ACT domain YPO3380 IPR003607 HD/PDEase domain YPO3380 IPR004095 TGS YPO3380 IPR004811 RelA/SpoT family YPO3380 IPR007685 RelA/SpoT YPO3380 IPR012675 Beta-grasp domain YPO3380 IPR012676 TGS-like YPO3381 IPR001789 Signal transduction response regulator, receiver domain YPO3381 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO3381 IPR003660 HAMP linker domain YPO3381 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPO3381 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPO3381 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain YPO3381 IPR011006 CheY-like superfamily YPO3381 IPR019247 Histidine kinase BarA, N-terminal YPO3382 IPR001478 PDZ domain YPO3382 IPR001940 Peptidase S1C YPO3382 IPR009003 Trypsin-like cysteine/serine peptidase domain YPO3382 IPR011782 Peptidase S1C, Do YPO3383 IPR003607 HD/PDEase domain YPO3383 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase YPO3383 IPR006674 HD domain YPO3383 IPR020779 Deoxyguanosinetriphosphate triphosphohydrolase, proteobacteria YPO3383 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain YPO3383 IPR026875 Phosphohydrolase-associated domain YPO3383 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain YPO3384 IPR000845 Nucleoside phosphorylase domain YPO3384 IPR010049 MTA/SAH nucleosidase YPO3384 IPR018017 Nucleoside phosphorylase YPO3385 IPR002491 ABC transporter periplasmic binding domain YPO3385 IPR023544 ABC transporter, vitamin B12-binding protein YPO3386 IPR005115 Uncharacterised domain UPF0126 YPO3387 IPR000361 FeS cluster biogenesis YPO3387 IPR016092 FeS cluster insertion protein YPO3387 IPR017870 FeS cluster insertion, C-terminal, conserved site YPO3387 IPR023063 Iron-sulfur cluster insertion protein ErpA YPO3388 IPR001807 Chloride channel, voltage gated YPO3388 IPR014743 Chloride channel, core YPO3388 IPR023861 Chloride channel, ClcA YPO3389 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase YPO3389 IPR005814 Aminotransferase class-III YPO3389 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPO3389 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPO3389 IPR015424 Pyridoxal phosphate-dependent transferase YPO3390 IPR000522 ABC transporter, permease protein YPO3390 IPR029022 ABC transporter, BtuC-like YPO3391 IPR002491 ABC transporter periplasmic binding domain YPO3391 IPR008091 Ferrichrome-binding periplasmic protein YPO3392 IPR003439 ABC transporter-like YPO3392 IPR003593 AAA+ ATPase domain YPO3392 IPR017871 ABC transporter, conserved site YPO3392 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3393 IPR001264 Glycosyl transferase, family 51 YPO3393 IPR001460 Penicillin-binding protein, transpeptidase YPO3393 IPR011813 Penicillin-binding protein 1B YPO3393 IPR012338 Beta-lactamase/transpeptidase-like YPO3393 IPR023346 Lysozyme-like domain YPO3393 IPR028166 Bifunctional transglycosylase second domain YPO3393 IPR032730 YPO3393 YPO3394 IPR001650 Helicase, C-terminal YPO3394 IPR007502 Helicase-associated domain YPO3394 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type YPO3394 IPR011545 DEAD/DEAH box helicase domain YPO3394 IPR013689 RNA helicase, ATP-dependent, HrpB type, C-terminal YPO3394 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YPO3394 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3395 IPR004175 2',5' RNA ligase YPO3395 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase YPO3395 IPR014051 Phosphoesterase, HXTX YPO3396 IPR005224 Sugar fermentation stimulation protein YPO3397 IPR000962 Zinc finger, DksA/TraR C4-type YPO3397 IPR012784 RNA polymerase-binding transcription factor DksA YPO3397 IPR020458 Zinc finger, DksA/TraR C4-type conserved site YPO3397 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria YPO3398 IPR000924 Glutamyl/glutaminyl-tRNA synthetase YPO3398 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO3398 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain YPO3398 IPR022380 Glutamyl-Q tRNA(Asp) synthetase YPO3399 IPR002646 Poly A polymerase, head domain YPO3399 IPR010206 Poly(A) polymerase I YPO3399 IPR025866 Polymerase A arginine-rich C-terminal domain YPO3399 IPR032828 YPO3399 YPO3400 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK YPO3401 IPR003700 Ketopantoate hydroxymethyltransferase YPO3401 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain YPO3402 IPR003721 Pantoate-beta-alanine ligase YPO3402 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO3403 IPR003190 Aspartate decarboxylase YPO3403 IPR009010 Aspartate decarboxylase-like domain YPO3404 IPR002509 Polysaccharide deacetylase YPO3404 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel YPO3405 IPR000412 ABC-2 transporter YPO3405 IPR013525 ABC-2 type transporter YPO3406 IPR003439 ABC transporter-like YPO3406 IPR003593 AAA+ ATPase domain YPO3406 IPR017871 ABC transporter, conserved site YPO3406 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3407 IPR001765 Carbonic anhydrase YPO3407 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site YPO3408 IPR000836 Phosphoribosyltransferase domain YPO3408 IPR005904 Hypoxanthine phosphoribosyl transferase YPO3408 IPR029057 Phosphoribosyltransferase-like YPO3409 IPR001117 Multicopper oxidase, type 1 YPO3409 IPR002355 Multicopper oxidase, copper-binding site YPO3409 IPR008972 Cupredoxin YPO3409 IPR011706 Multicopper oxidase, type 2 YPO3409 IPR011707 Multicopper oxidase, type 3 YPO3409 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal YPO3410 IPR019114 Chaperone lipoprotein, PulS/OutS-like YPO3411 IPR001045 Spermidine/spermine synthases family YPO3411 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPO3411 IPR030373 YPO3411 YPO3412 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic YPO3412 IPR009165 S-adenosylmethionine decarboxylase, bacterial YPO3412 IPR016067 S-adenosylmethionine decarboxylase, core YPO3413 IPR000620 Drug/metabolite transporter YPO3414 IPR008249 Uncharacterised protein family UPF0231 YPO3415 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha YPO3415 IPR004406 Aconitase B, bacterial YPO3415 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YPO3415 IPR015929 Aconitase B, N-terminal, bacterial YPO3415 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 YPO3415 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 YPO3415 IPR015933 Aconitase B, HEAT-like, bacterial YPO3415 IPR015937 Aconitase/isopropylmalate dehydratase YPO3415 IPR018136 Aconitase family, 4Fe-4S cluster binding site YPO3416 IPR002686 Transposase IS200-like YPO3417 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YPO3417 IPR006258 Dihydrolipoamide dehydrogenase YPO3417 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site YPO3417 IPR016156 FAD/NAD-linked reductase, dimerisation domain YPO3417 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPO3418 IPR000089 Biotin/lipoyl attachment YPO3418 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain YPO3418 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site YPO3418 IPR004167 E3 binding YPO3418 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex YPO3418 IPR011053 Single hybrid motif YPO3418 IPR023213 Chloramphenicol acetyltransferase-like domain YPO3419 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type YPO3419 IPR005474 Transketolase, N-terminal YPO3419 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II YPO3419 IPR029061 Thiamin diphosphate-binding fold YPO3419 IPR033247 YPO3419 YPO3420 IPR000524 Transcription regulator HTH, GntR YPO3420 IPR008920 Transcription regulator FadR/GntR, C-terminal YPO3420 IPR011711 GntR, C-terminal YPO3420 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3421 IPR002293 Amino acid/polyamine transporter I YPO3421 IPR004840 Amino acid permease, conserved site YPO3421 IPR004841 Amino acid permease/ SLC12A domain YPO3422 IPR031347 YPO3422 YPO3423 IPR002502 N-acetylmuramoyl-L-alanine amidase domain YPO3424 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal YPO3424 IPR004393 Nicotinate-nucleotide pyrophosphorylase YPO3424 IPR013785 Aldolase-type TIM barrel YPO3424 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal YPO3424 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD YPO3425 IPR012902 Prokaryotic N-terminal methylation site YPO3426 IPR001482 Type II secretion system protein E YPO3426 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3427 IPR001992 Type II secretion system conserved site YPO3427 IPR003004 GspF/PilC family YPO3427 IPR018076 Type II secretion system F domain YPO3428 IPR001093 IMP dehydrogenase/GMP reductase YPO3428 IPR005993 Guanosine monophosphate reductase 1 YPO3428 IPR013785 Aldolase-type TIM barrel YPO3428 IPR015875 IMP dehydrogenase / GMP reductase, conserved site YPO3430 IPR001977 Dephospho-CoA kinase YPO3430 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3431 IPR009777 Cell division protein ZapD YPO3431 IPR027462 Z ring-associated protein D, C-terminal domain YPO3432 IPR005584 DNA gyrase inhibitor YacG YPO3432 IPR013088 Zinc finger, NHR/GATA-type YPO3433 IPR002686 Transposase IS200-like YPO3434 IPR001584 Integrase, catalytic core YPO3434 IPR006120 Resolvase, HTH domain YPO3434 IPR009057 Homeodomain-like YPO3434 IPR012337 Ribonuclease H-like domain YPO3435 IPR001270 ClpA/B family YPO3435 IPR002611 IstB-like ATP-binding protein YPO3435 IPR003593 AAA+ ATPase domain YPO3435 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3435 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO3436 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO3437 IPR004919 Domain of unknown function DUF262 YPO3437 IPR011089 Domain of unknown function DUF1524 YPO3438 IPR002104 Integrase, catalytic YPO3438 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPO3438 IPR013762 Integrase-like, catalytic core YPO3438 IPR023109 Integrase/recombinase, N-terminal YPO3438 IPR025166 Domain of unknown function DUF4102 YPO3439 IPR005495 Permease YjgP/YjgQ, predicted YPO3439 IPR030923 YPO3439 YPO3440 IPR005495 Permease YjgP/YjgQ, predicted YPO3440 IPR030922 YPO3440 YPO3441 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal YPO3441 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal YPO3441 IPR011356 Leucine aminopeptidase/peptidase B YPO3441 IPR023042 Peptidase M17, leucine aminopeptidase YPO3442 IPR007459 DNA polymerase III chi subunit, HolC YPO3443 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site YPO3443 IPR002300 Aminoacyl-tRNA synthetase, class Ia YPO3443 IPR002303 Valine-tRNA ligase YPO3443 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain YPO3443 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding YPO3443 IPR010978 tRNA-binding arm YPO3443 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding YPO3443 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO3443 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm YPO3444 IPR000182 GNAT domain YPO3444 IPR016181 Acyl-CoA N-acyltransferase YPO3445 IPR009671 Regulator of ribonuclease activity B domain YPO3445 IPR016716 Regulator of ribonuclease activity B YPO3446 IPR002292 Ornithine/putrescine carbamoyltransferase YPO3446 IPR006130 Aspartate/ornithine carbamoyltransferase YPO3446 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain YPO3446 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding YPO3446 IPR024904 Ornithine carbamoyltransferase YPO3447 IPR004375 Conserved hypothetical protein CHP00022 YPO3450 IPR000515 MetI-like domain YPO3451 IPR000515 MetI-like domain YPO3451 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YPO3452 IPR003439 ABC transporter-like YPO3452 IPR003593 AAA+ ATPase domain YPO3452 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3453 IPR003439 ABC transporter-like YPO3453 IPR003593 AAA+ ATPase domain YPO3453 IPR017871 ABC transporter, conserved site YPO3453 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3454 IPR005144 ATP-cone YPO3454 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic YPO3454 IPR019777 Formate C-acetyltransferase glycine radical, conserved site YPO3455 IPR001989 Radical-activating enzyme, conserved site YPO3455 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic YPO3455 IPR013785 Aldolase-type TIM barrel YPO3456 IPR000524 Transcription regulator HTH, GntR YPO3456 IPR011663 UbiC transcription regulator-associated YPO3456 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3456 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF YPO3456 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain YPO3457 IPR009609 Phosphonate metabolism PhnG YPO3458 IPR008772 Bacterial phosphonate metabolism, PhnH YPO3459 IPR008773 Phosphonate metabolism protein PhnI YPO3460 IPR010306 Phosphonate metabolism PhnJ YPO3461 IPR003439 ABC transporter-like YPO3461 IPR003593 AAA+ ATPase domain YPO3461 IPR012700 Phosphonate C-P lyase system, PhnK YPO3461 IPR017871 ABC transporter, conserved site YPO3461 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3462 IPR003439 ABC transporter-like YPO3462 IPR003593 AAA+ ATPase domain YPO3462 IPR012701 Phosphonate C-P lyase system, PhnL YPO3462 IPR017871 ABC transporter, conserved site YPO3462 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3463 IPR011059 Metal-dependent hydrolase, composite domain YPO3463 IPR012696 Phosphonate metabolism PhnM YPO3463 IPR013108 Amidohydrolase 3 YPO3463 IPR032466 YPO3463 YPO3464 IPR008145 Guanylate kinase/L-type calcium channel beta subunit YPO3464 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN YPO3464 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3465 IPR001279 Beta-lactamase-like YPO3465 IPR017693 Phosphonate metabolism protein PhnP YPO3466 IPR000534 Semialdehyde dehydrogenase, NAD-binding YPO3466 IPR016040 NAD(P)-binding domain YPO3467 IPR011194 Uncharacterised protein family UPF0306 YPO3467 IPR012349 FMN-binding split barrel YPO3468 IPR008397 Alginate lyase domain YPO3468 IPR008929 Chondroitin AC/alginate lyase YPO3469 IPR003439 ABC transporter-like YPO3469 IPR003593 AAA+ ATPase domain YPO3469 IPR008995 Molybdate/tungstate binding, C-terminal YPO3469 IPR012340 Nucleic acid-binding, OB-fold YPO3469 IPR013611 Transport-associated OB, type 2 YPO3469 IPR017871 ABC transporter, conserved site YPO3469 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3470 IPR000515 MetI-like domain YPO3471 IPR000515 MetI-like domain YPO3472 IPR006059 Bacterial extracellular solute-binding, family 1 YPO3473 IPR008397 Alginate lyase domain YPO3473 IPR008929 Chondroitin AC/alginate lyase YPO3474 IPR008397 Alginate lyase domain YPO3474 IPR008929 Chondroitin AC/alginate lyase YPO3474 IPR012480 Heparinase II/III-like YPO3475 IPR000305 GIY-YIG nuclease superfamily YPO3475 IPR022992 Uncharacterised protein family UPF0213, GIY-YIG endonuclease YPO3476 IPR000182 GNAT domain YPO3476 IPR016181 Acyl-CoA N-acyltransferase YPO3477 IPR003033 SCP2 sterol-binding domain YPO3477 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT YPO3479 IPR001539 Peptidase U32 YPO3479 IPR022998 Thiamin phosphate synthase superfamily YPO3480 IPR001539 Peptidase U32 YPO3481 IPR003423 Outer membrane efflux protein YPO3481 IPR010131 RND efflux system, outer membrane lipoprotein, NodT YPO3482 IPR001036 Acriflavin resistance protein YPO3482 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 YPO3482 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains YPO3483 IPR006143 RND efflux pump, membrane fusion protein YPO3483 IPR032317 YPO3483 YPO3484 IPR011251 Luciferase-like domain YPO3484 IPR019949 Luciferase family oxidoreductase, group 1 YPO3485 IPR001387 Cro/C1-type helix-turn-helix domain YPO3485 IPR010982 Lambda repressor-like, DNA-binding domain YPO3486 IPR009241 Addiction module killer protein YPO3488 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site YPO3488 IPR001650 Helicase, C-terminal YPO3488 IPR005580 DbpA, RNA-binding YPO3488 IPR011545 DEAD/DEAH box helicase domain YPO3488 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YPO3488 IPR021046 Cold-shock protein, DEAD box A, C-terminal YPO3488 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3488 IPR028618 ATP-dependent RNA helicase DeaD YPO3489 IPR011990 Tetratricopeptide-like helical domain YPO3489 IPR013105 Tetratricopeptide TPR2 YPO3489 IPR019734 Tetratricopeptide repeat YPO3489 IPR023605 Lipoprotein NlpI YPO3490 IPR001247 Exoribonuclease, phosphorolytic domain 1 YPO3490 IPR003029 Ribosomal protein S1, RNA-binding domain YPO3490 IPR004087 K Homology domain YPO3490 IPR004088 K Homology domain, type 1 YPO3490 IPR012162 Polyribonucleotide nucleotidyltransferase YPO3490 IPR012340 Nucleic acid-binding, OB-fold YPO3490 IPR015847 Exoribonuclease, phosphorolytic domain 2 YPO3490 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain YPO3490 IPR020568 Ribosomal protein S5 domain 2-type fold YPO3490 IPR022967 RNA-binding domain, S1 YPO3490 IPR027408 PNPase/RNase PH domain YPO3491 IPR001584 Integrase, catalytic core YPO3491 IPR012337 Ribonuclease H-like domain YPO3491 IPR025948 HTH-like domain YPO3492 IPR009057 Homeodomain-like YPO3492 IPR010921 Trp repressor/replication initiator YPO3492 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3493 IPR000589 Ribosomal protein S15 YPO3493 IPR005290 Ribosomal protein S15, bacterial-type YPO3493 IPR009068 S15/NS1, RNA-binding YPO3494 IPR002501 Pseudouridine synthase II YPO3494 IPR014780 tRNA pseudouridine synthase II, TruB YPO3494 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal YPO3494 IPR015947 PUA-like domain YPO3494 IPR020103 Pseudouridine synthase, catalytic domain YPO3494 IPR032819 YPO3494 YPO3495 IPR000238 Ribosome-binding factor A YPO3495 IPR015946 K homology domain-like, alpha/beta YPO3495 IPR020053 Ribosome-binding factor A, conserved site YPO3495 IPR023799 Ribosome-binding factor A domain YPO3496 IPR000178 Translation initiation factor aIF-2, bacterial-like YPO3496 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 YPO3496 IPR005225 Small GTP-binding protein domain YPO3496 IPR006847 Translation initiation factor IF-2, N-terminal YPO3496 IPR009000 Translation protein, beta-barrel domain YPO3496 IPR009061 DNA binding domain, putative YPO3496 IPR013575 Initiation factor 2 associated domain, bacterial YPO3496 IPR023115 Translation initiation factor IF- 2, domain 3 YPO3496 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3497 IPR004087 K Homology domain YPO3497 IPR009019 K homology domain, prokaryotic type YPO3497 IPR010213 Transcription termination factor NusA YPO3497 IPR010214 Transcription termination factor NusA, C-terminal duplication YPO3497 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical YPO3497 IPR012340 Nucleic acid-binding, OB-fold YPO3497 IPR013735 Transcription factor NusA, N-terminal YPO3497 IPR015946 K homology domain-like, alpha/beta YPO3497 IPR022967 RNA-binding domain, S1 YPO3497 IPR025249 KH domain, NusA-like YPO3497 IPR030842 YPO3497 YPO3498 IPR003728 Ribosome maturation factor RimP YPO3498 IPR028989 Ribosome maturation factor RimP, N-terminal YPO3498 IPR028998 Ribosome maturation factor RimP, C-terminal YPO3499 IPR004692 Preprotein translocase SecG subunit YPO3500 IPR005841 Alpha-D-phosphohexomutase superfamily YPO3500 IPR005843 Alpha-D-phosphohexomutase, C-terminal YPO3500 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I YPO3500 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II YPO3500 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III YPO3500 IPR006352 Phosphoglucosamine mutase YPO3500 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III YPO3500 IPR016066 Alpha-D-phosphohexomutase, conserved site YPO3501 IPR000489 Pterin-binding YPO3501 IPR006390 Dihydropteroate synthase YPO3501 IPR011005 Dihydropteroate synthase-like YPO3502 IPR000642 Peptidase M41 YPO3502 IPR003593 AAA+ ATPase domain YPO3502 IPR003959 ATPase, AAA-type, core YPO3502 IPR003960 ATPase, AAA-type, conserved site YPO3502 IPR005936 Peptidase, FtsH YPO3502 IPR011546 Peptidase M41, FtsH extracellular YPO3502 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3503 IPR002877 Ribosomal RNA methyltransferase FtsJ domain YPO3503 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria YPO3503 IPR015507 Ribosomal RNA large subunit methyltransferase E YPO3503 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPO3504 IPR001890 RNA-binding, CRM domain YPO3504 IPR017924 RNA-binding protein YhbY YPO3505 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal YPO3505 IPR006359 Transcription elongation factor GreA YPO3505 IPR018151 Transcription elongation factor, GreA/GreB, conserved site YPO3505 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal YPO3505 IPR023459 Transcription elongation factor GreA/GreB family YPO3505 IPR028624 Transcription elongation factor GreA/GreB YPO3506 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C YPO3506 IPR012338 Beta-lactamase/transpeptidase-like YPO3507 IPR001789 Signal transduction response regulator, receiver domain YPO3507 IPR001867 Signal transduction response regulator, C-terminal YPO3507 IPR011006 CheY-like superfamily YPO3507 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3508 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO3508 IPR003660 HAMP linker domain YPO3508 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPO3508 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPO3509 IPR006073 GTP binding domain YPO3509 IPR006074 GTP1/OBG, conserved site YPO3509 IPR006169 GTP1/OBG domain YPO3509 IPR014100 GTP-binding protein Obg/CgtA YPO3509 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3510 IPR000620 Drug/metabolite transporter YPO3511 IPR001684 Ribosomal protein L27 YPO3511 IPR018261 Ribosomal protein L27, conserved site YPO3512 IPR001787 Ribosomal protein L21 YPO3512 IPR018258 Ribosomal protein L21, conserved site YPO3512 IPR028909 Ribosomal protein L21-like YPO3513 IPR000092 Polyprenyl synthetase YPO3513 IPR008949 Terpenoid synthase YPO3513 IPR017446 Polyprenyl synthetase-related YPO3514 IPR003314 Transposase MuA/Repressor CI, DNA-binding YPO3514 IPR009061 DNA binding domain, putative YPO3514 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3514a IPR010982 Lambda repressor-like, DNA-binding domain YPO3516 IPR001236 Lactate/malate dehydrogenase, N-terminal YPO3516 IPR001252 Malate dehydrogenase, active site YPO3516 IPR001557 L-lactate/malate dehydrogenase YPO3516 IPR010097 Malate dehydrogenase, type 1 YPO3516 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal YPO3516 IPR016040 NAD(P)-binding domain YPO3516 IPR022383 Lactate/malate dehydrogenase, C-terminal YPO3516 IPR023958 Malate dehydrogenase, type 1, bacterial YPO3517 IPR001669 Arginine repressor YPO3517 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3517 IPR020899 Arginine repressor, C-terminal YPO3517 IPR020900 Arginine repressor, DNA-binding domain YPO3517 IPR024946 Arginine repressor C-terminal-like domain YPO3518 IPR010854 Domain of unknown function DUF1471 YPO3518 IPR025543 Dodecin-like YPO3519 IPR000713 Mur ligase, N-terminal YPO3519 IPR004101 Mur ligase, C-terminal YPO3519 IPR005757 Murein peptide ligase YPO3519 IPR013221 Mur ligase, central YPO3519 IPR016040 NAD(P)-binding domain YPO3520 IPR000146 Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase YPO3520 IPR020548 Fructose-1,6-bisphosphatase, active site YPO3520 IPR028343 Fructose-1,6-bisphosphatase YPO3520 IPR033391 YPO3520 YPO3521 IPR008162 Inorganic pyrophosphatase YPO3522 IPR009288 AIG2-like YPO3522 IPR013024 Butirosin biosynthesis, BtrG-like YPO3523 IPR007452 Protein of unknown function DUF490 YPO3523 IPR011049 Serralysin-like metalloprotease, C-terminal YPO3524 IPR000184 Bacterial surface antigen (D15) YPO3524 IPR010827 Surface antigen variable number YPO3525 IPR002569 Peptide methionine sulphoxide reductase MsrA YPO3525 IPR028427 Peptide methionine sulfoxide reductase YPO3526 IPR000644 CBS domain YPO3526 IPR002550 Domain of unknown function DUF21 YPO3526 IPR005170 Transporter-associated domain YPO3526 IPR016166 FAD-binding, type 2 YPO3526 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 YPO3527 IPR009491 Protein of unknown function DUF1107 YPO3528 IPR006513 Conserved hypothetical protein CHP01626, YtfJ YPO3528 IPR012336 Thioredoxin-like fold YPO3529 IPR000760 Inositol monophosphatase YPO3529 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial YPO3529 IPR020550 Inositol monophosphatase, conserved site YPO3529 IPR020583 Inositol monophosphatase, metal-binding site YPO3530 IPR004843 Calcineurin-like phosphoesterase domain, apaH type YPO3530 IPR006146 5'-Nucleotidase, conserved site YPO3530 IPR006179 5'-Nucleotidase/apyrase YPO3530 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase YPO3530 IPR008334 5'-Nucleotidase, C-terminal YPO3530 IPR029052 Metallo-dependent phosphatase-like YPO3531 IPR012312 Haemerythrin/HHE cation-binding motif YPO3531 IPR019903 Repair of iron centres family YPO3531 IPR023742 Iron-sulfur cluster repair protein YftE YPO3532 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal YPO3532 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain YPO3532 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type YPO3533 IPR007340 Opacity-associated protein A YPO3533 IPR013731 Opacity-associated protein A, N-terminal YPO3534 IPR022231 Protein of unknown function DUF3757 YPO3535 IPR002686 Transposase IS200-like YPO3536 IPR000244 Ribosomal protein L9 YPO3536 IPR009027 Ribosomal protein L9/RNase H1, N-terminal YPO3536 IPR020069 Ribosomal protein L9, C-terminal YPO3536 IPR020070 Ribosomal protein L9, N-terminal YPO3536 IPR020594 Ribosomal protein L9, bacteria/chloroplast YPO3537 IPR001648 Ribosomal protein S18 YPO3537 IPR018275 Ribosomal protein S18, conserved site YPO3538 IPR000424 Primosome PriB/single-strand DNA-binding YPO3538 IPR012340 Nucleic acid-binding, OB-fold YPO3538 IPR023646 Primosomal replication protein PriB YPO3539 IPR000529 Ribosomal protein S6 YPO3539 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 YPO3539 IPR020814 Ribosomal protein S6, plastid/chloroplast YPO3539 IPR020815 Ribosomal protein S6, conserved site YPO3541 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain YPO3541 IPR029058 Alpha/Beta hydrolase fold YPO3542 IPR001584 Integrase, catalytic core YPO3542 IPR006120 Resolvase, HTH domain YPO3542 IPR009057 Homeodomain-like YPO3542 IPR012337 Ribonuclease H-like domain YPO3543 IPR001270 ClpA/B family YPO3543 IPR002611 IstB-like ATP-binding protein YPO3543 IPR003593 AAA+ ATPase domain YPO3543 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3543 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO3544 IPR004045 Glutathione S-transferase, N-terminal YPO3544 IPR010987 Glutathione S-transferase, C-terminal-like YPO3544 IPR012336 Thioredoxin-like fold YPO3544 IPR016639 Glutathione S-transferase (GST) YPO3545 IPR000847 Transcription regulator HTH, LysR YPO3545 IPR005119 LysR, substrate-binding YPO3545 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3546 IPR003829 Pirin, N-terminal domain YPO3546 IPR011051 RmlC-like cupin domain YPO3546 IPR012093 Pirin YPO3546 IPR014710 RmlC-like jelly roll fold YPO3547 IPR000878 Tetrapyrrole methylase YPO3547 IPR008189 rRNA small subunit methyltransferase I YPO3547 IPR014776 Tetrapyrrole methylase, subdomain 2 YPO3547 IPR014777 Tetrapyrrole methylase, subdomain 1 YPO3547 IPR018063 SAM-dependent methyltransferase RsmI, conserved site YPO3548 IPR007443 Penicillin-binding protein activator LpoA YPO3548 IPR028082 Periplasmic binding protein-like I YPO3549 IPR003509 Uncharacterised protein family UPF0102 YPO3549 IPR011335 Restriction endonuclease type II-like YPO3549 IPR011856 tRNA endonuclease-like domain YPO3550 IPR001347 Sugar isomerase (SIS) YPO3550 IPR023070 DnaA initiator-associating protein YPO3551 IPR007055 BON domain YPO3551 IPR014004 Transport-associated and nodulation domain, bacteria YPO3552 IPR001264 Glycosyl transferase, family 51 YPO3552 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase YPO3552 IPR023346 Lysozyme-like domain YPO3553 IPR026041 Enhancing lycopene biosynthesis protein 2 YPO3553 IPR029062 Class I glutamine amidotransferase-like YPO3555 IPR000014 PAS domain YPO3555 IPR001789 Signal transduction response regulator, receiver domain YPO3555 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO3555 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPO3555 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPO3555 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain YPO3555 IPR011006 CheY-like superfamily YPO3555 IPR013767 PAS fold YPO3555 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB YPO3555 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain YPO3556 IPR005911 Conserved hypothetical protein CHP01212 YPO3556 IPR006638 Elongator protein 3/MiaB/NifB YPO3556 IPR007197 Radical SAM YPO3556 IPR023404 Radical SAM, alpha/beta horseshoe YPO3556 IPR032432 YPO3556 YPO3557 IPR002489 Glutamate synthase, alpha subunit, C-terminal YPO3557 IPR002932 Glutamate synthase domain YPO3557 IPR006982 Glutamate synthase, central-N YPO3557 IPR013785 Aldolase-type TIM barrel YPO3557 IPR017932 Glutamine amidotransferase type 2 domain YPO3557 IPR029055 Nucleophile aminohydrolases, N-terminal YPO3558 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 YPO3558 IPR009051 Alpha-helical ferredoxin YPO3558 IPR016040 NAD(P)-binding domain YPO3558 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPO3558 IPR028261 Dihydroprymidine dehydrogenase domain II YPO3560 IPR007481 Stringent starvation protein B YPO3561 IPR004045 Glutathione S-transferase, N-terminal YPO3561 IPR004046 Glutathione S-transferase, C-terminal YPO3561 IPR010987 Glutathione S-transferase, C-terminal-like YPO3561 IPR012336 Thioredoxin-like fold YPO3562 IPR000754 Ribosomal protein S9 YPO3562 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPO3562 IPR020568 Ribosomal protein S5 domain 2-type fold YPO3562 IPR020574 Ribosomal protein S9, conserved site YPO3562 IPR023035 Ribosomal protein S9, bacterial/plastid YPO3563 IPR005822 Ribosomal protein L13 YPO3563 IPR005823 Ribosomal protein L13, bacterial-type YPO3563 IPR023563 Ribosomal protein L13, conserved site YPO3563 IPR023564 Ribosomal protein L13 domain YPO3564 IPR005654 ATPase, AFG1-like YPO3564 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3564 IPR030870 YPO3564 YPO3565 IPR009386 Protein of unknown function DUF1043 YPO3566 IPR001478 PDZ domain YPO3566 IPR001940 Peptidase S1C YPO3566 IPR009003 Trypsin-like cysteine/serine peptidase domain YPO3566 IPR011782 Peptidase S1C, Do YPO3567 IPR002686 Transposase IS200-like YPO3568 IPR001478 PDZ domain YPO3568 IPR001940 Peptidase S1C YPO3568 IPR009003 Trypsin-like cysteine/serine peptidase domain YPO3568 IPR011783 Peptidase S1C, DegS YPO3569 IPR001986 Enolpyruvate transferase domain YPO3569 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YPO3569 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta YPO3570 IPR002634 BolA protein YPO3571 IPR002645 STAS domain YPO3572 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC YPO3572 IPR023094 Toluene tolerance protein, alpha-helical YPO3572 IPR032710 YPO3572 YPO3573 IPR003399 Mammalian cell entry-related YPO3573 IPR030970 YPO3573 YPO3574 IPR003453 Permease domain YPO3574 IPR030802 YPO3574 YPO3575 IPR003439 ABC transporter-like YPO3575 IPR003593 AAA+ ATPase domain YPO3575 IPR017871 ABC transporter, conserved site YPO3575 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3576 IPR004481 Sodium/potassium/calcium exchanger YPO3576 IPR004837 Sodium/calcium exchanger membrane region YPO3577 IPR000644 CBS domain YPO3577 IPR001347 Sugar isomerase (SIS) YPO3577 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type YPO3578 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase YPO3578 IPR023214 HAD-like domain YPO3579 IPR010664 Lipopolysaccharide assembly, LptC-related YPO3579 IPR026265 Lipopolysaccharide export system protein LptC YPO3580 IPR005653 Organic solvent tolerance-like, N-terminal YPO3580 IPR014340 Lipopolysaccharide assembly, LptA YPO3581 IPR003439 ABC transporter-like YPO3581 IPR003593 AAA+ ATPase domain YPO3581 IPR017871 ABC transporter, conserved site YPO3581 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3581 IPR030921 YPO3581 YPO3581 IPR032823 YPO3581 YPO3582 IPR000394 RNA polymerase sigma factor 54 YPO3582 IPR007046 RNA polymerase sigma factor 54, core-binding YPO3582 IPR007634 RNA polymerase sigma factor 54, DNA-binding YPO3585 IPR002178 PTS EIIA type-2 domain YPO3585 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN YPO3585 IPR016152 Phosphotransferase/anion transporter YPO3586 IPR005337 ATPase, P-loop-containing YPO3586 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3587 IPR000032 Phosphocarrier HPr protein-like YPO3587 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site YPO3588 IPR002082 Aspartate carbamoyltransferase YPO3588 IPR006130 Aspartate/ornithine carbamoyltransferase YPO3588 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain YPO3588 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding YPO3589 IPR002801 Aspartate transcarbamylase regulatory subunit YPO3589 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal YPO3589 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal YPO3590 IPR006056 Enamine/imine deaminase YjgF-like YPO3590 IPR006175 YjgF/Yer057p/UK114 family YPO3590 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like YPO3590 IPR019897 YjgF-like protein, conserved site YPO3591 IPR001584 Integrase, catalytic core YPO3591 IPR006120 Resolvase, HTH domain YPO3591 IPR009057 Homeodomain-like YPO3591 IPR012337 Ribonuclease H-like domain YPO3592 IPR001270 ClpA/B family YPO3592 IPR002611 IstB-like ATP-binding protein YPO3592 IPR003593 AAA+ ATPase domain YPO3592 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3592 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO3593 IPR010272 Type VI secretion system, VCA0110 YPO3594 IPR010732 Protein of unknown function DUF1305 YPO3595 IPR008984 SMAD/FHA domain YPO3595 IPR017735 Type VI secretion system, FHA domain-containing protein YPO3596 IPR017734 Type VI secretion system, lipoprotein SciN YPO3597 IPR010263 Protein of unknown function DUF876 YPO3598 IPR017732 Type IV / VI secretion system, DotU YPO3599 IPR001270 ClpA/B family YPO3599 IPR003593 AAA+ ATPase domain YPO3599 IPR003959 ATPase, AAA-type, core YPO3599 IPR004176 Clp, N-terminal YPO3599 IPR017729 Type VI secretion system, ATPase ClpV1 YPO3599 IPR018368 ClpA/B, conserved site 1 YPO3599 IPR019489 Clp ATPase, C-terminal YPO3599 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3599 IPR028299 ClpA/B, conserved site 2 YPO3600 IPR002197 DNA binding HTH domain, Fis-type YPO3600 IPR009057 Homeodomain-like YPO3601 IPR017738 Type VI secretion system-associated, VCA0118 YPO3602 IPR010657 ImpA, N-terminal YPO3602 IPR017739 Type VI secretion system-associated, VCA0119 YPO3603 IPR009612 ImcF-related YPO3603 IPR010623 Domain of unknown function DUF1215 YPO3603 IPR017731 Type VI secretion system, IcmF YPO3603 IPR025743 ImcF-related, N-terminal domain YPO3603 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3606 IPR006531 Gp5 N-terminal YPO3606 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPO3606 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPO3607 IPR014894 Protein DcrB YPO3607 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich YPO3610 IPR018958 SMI1/KNR4 like domain YPO3611 IPR014944 Toxin SymE-like YPO3611a IPR014944 Toxin SymE-like YPO3612 IPR001387 Cro/C1-type helix-turn-helix domain YPO3612 IPR010982 Lambda repressor-like, DNA-binding domain YPO3613 IPR006531 Gp5 N-terminal YPO3613 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein YPO3613 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset YPO3614 IPR014894 Protein DcrB YPO3614 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich YPO3615 IPR001826 RHS protein YPO3615 IPR006530 YD repeat YPO3615 IPR008727 PAAR motif YPO3615 IPR022385 Rhs repeat-associated core YPO3615 IPR031325 YPO3615 YPO3617 IPR013022 Xylose isomerase-like, TIM barrel domain YPO3618 IPR000683 Oxidoreductase, N-terminal YPO3618 IPR016040 NAD(P)-binding domain YPO3619 IPR003313 AraC-type arabinose-binding/dimerisation domain YPO3619 IPR009057 Homeodomain-like YPO3619 IPR018060 DNA binding HTH domain, AraC-type YPO3620 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU YPO3620 IPR023750 RbsD-like domain YPO3621 IPR002139 Ribokinase YPO3621 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YPO3621 IPR011611 Carbohydrate kinase PfkB YPO3621 IPR029056 Ribokinase-like YPO3622 IPR002915 DeoC/FbaB/ lacD aldolase YPO3622 IPR011343 Deoxyribose-phosphate aldolase YPO3622 IPR013785 Aldolase-type TIM barrel YPO3623 IPR005025 NADPH-dependent FMN reductase-like YPO3623 IPR020048 NADPH-dependent FMN reductase, SsuE YPO3623 IPR029039 Flavoprotein-like YPO3624 IPR001638 Extracellular solute-binding protein, family 3 YPO3624 IPR010067 ABC transporter, substrate-binding protein, aliphatic sulphonates YPO3624 IPR015168 SsuA/THI5-like YPO3625 IPR011251 Luciferase-like domain YPO3625 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent YPO3626 IPR000515 MetI-like domain YPO3627 IPR003439 ABC transporter-like YPO3627 IPR003593 AAA+ ATPase domain YPO3627 IPR017871 ABC transporter, conserved site YPO3627 IPR017875 ABC transporter, aliphatic sulphonate import, ATP-binding protein YPO3627 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3629 IPR006043 Xanthine/uracil/vitamin C permease YPO3630 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria YPO3630 IPR006153 Cation/H+ exchanger YPO3630 IPR018422 Cation/H+ exchanger, CPA1 family YPO3632 IPR004960 Bacterial lipid A biosynthesis acyltransferase YPO3632 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase YPO3632 IPR030857 YPO3632 YPO3633 IPR025997 Periplasmic binding protein domain YPO3633 IPR028082 Periplasmic binding protein-like I YPO3634 IPR003439 ABC transporter-like YPO3634 IPR003593 AAA+ ATPase domain YPO3634 IPR017871 ABC transporter, conserved site YPO3634 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3635 IPR001851 ABC transporter, permease YPO3636 IPR001851 ABC transporter, permease YPO3637 IPR000577 YPO3637 YPO3637 IPR006003 Carbohydrate kinase, FGGY-related YPO3637 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPO3637 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPO3638 IPR001347 Sugar isomerase (SIS) YPO3639 IPR004045 Glutathione S-transferase, N-terminal YPO3639 IPR004046 Glutathione S-transferase, C-terminal YPO3639 IPR010987 Glutathione S-transferase, C-terminal-like YPO3639 IPR012336 Thioredoxin-like fold YPO3640 IPR027372 Phytase-like domain YPO3641 IPR001623 DnaJ domain YPO3642 IPR002686 Transposase IS200-like YPO3643 IPR002059 Cold-shock protein, DNA-binding YPO3643 IPR011129 Cold shock protein YPO3643 IPR012156 Cold shock, CspA YPO3643 IPR012340 Nucleic acid-binding, OB-fold YPO3643 IPR019844 Cold-shock conserved site YPO3644 IPR002059 Cold-shock protein, DNA-binding YPO3644 IPR011129 Cold shock protein YPO3644 IPR012156 Cold shock, CspA YPO3644 IPR012340 Nucleic acid-binding, OB-fold YPO3644 IPR019844 Cold-shock conserved site YPO3646 IPR008816 Glycine zipper 2TM domain YPO3647 IPR001279 Beta-lactamase-like YPO3648 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site YPO3648 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding YPO3648 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YPO3648 IPR013328 Dehydrogenase, multihelical YPO3648 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type YPO3648 IPR016040 NAD(P)-binding domain YPO3648 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain YPO3649 IPR003779 Carboxymuconolactone decarboxylase-like YPO3649 IPR029032 AhpD-like YPO3650 IPR005829 Sugar transporter, conserved site YPO3650 IPR011701 Major facilitator superfamily YPO3650 IPR020846 Major facilitator superfamily domain YPO3651 IPR000524 Transcription regulator HTH, GntR YPO3651 IPR008920 Transcription regulator FadR/GntR, C-terminal YPO3651 IPR011711 GntR, C-terminal YPO3651 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3652 IPR018958 SMI1/KNR4 like domain YPO3653 IPR015287 Colicin D immunity protein domain YPO3654 IPR002197 DNA binding HTH domain, Fis-type YPO3654 IPR005412 DNA-binding protein Fis YPO3654 IPR009057 Homeodomain-like YPO3655 IPR001269 tRNA-dihydrouridine synthase YPO3655 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 YPO3655 IPR013785 Aldolase-type TIM barrel YPO3655 IPR018517 tRNA-dihydrouridine synthase, conserved site YPO3655 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal YPO3655 IPR032887 YPO3655 YPO3656 IPR004498 Ribosomal protein L11 methyltransferase YPO3656 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPO3657 IPR001734 Sodium/solute symporter YPO3657 IPR011849 Sodium/pantothenate symporter YPO3657 IPR018212 Sodium/solute symporter, conserved site YPO3657a IPR010398 Protein of unknown function DUF997 YPO3658 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase YPO3658 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain YPO3658 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal YPO3658 IPR005482 Biotin carboxylase, C-terminal YPO3658 IPR011054 Rudiment single hybrid motif YPO3658 IPR013815 ATP-grasp fold, subdomain 1 YPO3658 IPR013816 ATP-grasp fold, subdomain 2 YPO3658 IPR016185 Pre-ATP-grasp domain YPO3659 IPR000089 Biotin/lipoyl attachment YPO3659 IPR001249 Acetyl-CoA biotin carboxyl carrier YPO3659 IPR001882 Biotin-binding site YPO3659 IPR011053 Single hybrid motif YPO3660 IPR001874 Dehydroquinase, class II YPO3660 IPR018509 Dehydroquinase, class II, conserved site YPO3661 IPR013130 Ferric reductase transmembrane component-like domain YPO3661 IPR022837 Sulphoxide reductase heme-binding subunit YedZ YPO3662 IPR000572 Oxidoreductase, molybdopterin-binding domain YPO3662 IPR022867 Sulphoxide reductase catalytic subunit YedY YPO3663 IPR002085 Alcohol dehydrogenase superfamily, zinc-type YPO3663 IPR011032 GroES (chaperonin 10)-like YPO3663 IPR013149 Alcohol dehydrogenase, C-terminal YPO3663 IPR013154 Alcohol dehydrogenase GroES-like YPO3663 IPR014188 Acrylyl-CoA reductase AcuI YPO3663 IPR016040 NAD(P)-binding domain YPO3663 IPR020843 Polyketide synthase, enoylreductase YPO3664 IPR000160 GGDEF domain YPO3664 IPR001633 EAL domain YPO3664 IPR029787 Nucleotide cyclase YPO3664 IPR033423 YPO3664 YPO3665 IPR004753 Cell shape determining protein MreB/Mrl YPO3666 IPR007221 Rod shape-determining protein MreC YPO3667 IPR007227 Cell shape-determining protein MreD YPO3667 IPR026034 Cell shape-determining protein MreD, proteobacterial type YPO3668 IPR003697 Maf-like protein YPO3668 IPR029001 Inosine triphosphate pyrophosphatase-like YPO3669 IPR003029 Ribosomal protein S1, RNA-binding domain YPO3669 IPR004659 Ribonuclease E/G YPO3669 IPR012340 Nucleic acid-binding, OB-fold YPO3669 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G YPO3669 IPR022967 RNA-binding domain, S1 YPO3670 IPR011836 Conserved hypothetical protein CHP02099 YPO3670 IPR025263 Domain of unknown function DUF3971 YPO3670 IPR032712 YPO3670 YPO3671 IPR001110 Uncharacterised protein family UPF0012, conserved site YPO3671 IPR003010 Carbon-nitrogen hydrolase YPO3672 IPR002510 TldD/PmbA YPO3672 IPR025502 TldD YPO3673 IPR006530 YD repeat YPO3673 IPR016130 Protein-tyrosine phosphatase, active site YPO3673 IPR022385 Rhs repeat-associated core YPO3673 IPR029021 Protein-tyrosine phosphatase-like YPO3674 IPR000340 Dual specificity phosphatase, catalytic domain YPO3674 IPR006530 YD repeat YPO3674 IPR016130 Protein-tyrosine phosphatase, active site YPO3674 IPR022385 Rhs repeat-associated core YPO3674 IPR029021 Protein-tyrosine phosphatase-like YPO3675 IPR022538 Protein of unknown function DUF2570 YPO3676 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain YPO3677 IPR032126 YPO3677 YPO3678 IPR003284 Salmonella virulence plasmid 65kDa B protein YPO3678 IPR022044 Insecticide toxin TcdB middle/C-terminal YPO3678 IPR022045 Insecticide toxin TcdB middle/N-terminal YPO3681 IPR018003 Insecticidal toxin complex/plasmid virulence protein YPO3682 IPR000847 Transcription regulator HTH, LysR YPO3682 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3683 IPR000847 Transcription regulator HTH, LysR YPO3683 IPR005119 LysR, substrate-binding YPO3683 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3684 IPR012451 Protein of unknown function DUF1656 YPO3685 IPR006143 RND efflux pump, membrane fusion protein YPO3685 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA YPO3686 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein YPO3686 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB YPO3689 IPR000026 Guanine-specific ribonuclease N1/T1 YPO3689 IPR001887 Barnase YPO3689 IPR016191 Ribonuclease/ribotoxin YPO3690 IPR000468 Barstar (barnase inhibitor) YPO3691 IPR006839 Ribosome-associated, YjgA YPO3691 IPR023153 PSPTO4464-like domain YPO3692 IPR002510 TldD/PmbA YPO3694 IPR009155 Cytochrome b562 YPO3694 IPR010980 Cytochrome c/b562 YPO3695 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal YPO3695 IPR028625 Regulator of nucleoside diphosphate kinase YPO3695 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain YPO3696 IPR006047 Glycosyl hydrolase, family 13, catalytic domain YPO3696 IPR012769 Trehalose-6-phosphate hydrolase YPO3696 IPR013780 Glycosyl hydrolase, family 13, all-beta YPO3696 IPR013781 Glycoside hydrolase, catalytic domain YPO3696 IPR015902 Glycoside hydrolase, family 13 YPO3696 IPR017853 Glycoside hydrolase, superfamily YPO3696 IPR022567 Domain of unknown function DUF3459 YPO3697 IPR001996 Phosphotransferase system, IIB component, type 1 YPO3697 IPR003352 Phosphotransferase system, EIIC YPO3697 IPR011296 Phosphotransferase system, trehalose-specific IIBC component YPO3697 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site YPO3698 IPR000843 Transcription regulator HTH, LacI YPO3698 IPR010982 Lambda repressor-like, DNA-binding domain YPO3698 IPR012771 Trehalose operon repressor YPO3698 IPR028082 Periplasmic binding protein-like I YPO3699 IPR031948 YPO3699 YPO3700 IPR001270 ClpA/B family YPO3700 IPR002611 IstB-like ATP-binding protein YPO3700 IPR003593 AAA+ ATPase domain YPO3700 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3700 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO3701 IPR001584 Integrase, catalytic core YPO3701 IPR006120 Resolvase, HTH domain YPO3701 IPR009057 Homeodomain-like YPO3701 IPR012337 Ribonuclease H-like domain YPO3703 IPR001584 Integrase, catalytic core YPO3703 IPR012337 Ribonuclease H-like domain YPO3703 IPR025948 HTH-like domain YPO3704 IPR010272 Type VI secretion system, VCA0110 YPO3705 IPR007048 GpW/Gp25/anti-adapter protein IraD YPO3705 IPR017737 Type VI secretion system, lysozyme-related protein YPO3706 IPR010269 Protein of unknown function DUF877 YPO3707 IPR008312 Uncharacterised conserved protein UCP028301 YPO3708 IPR008514 Type VI secretion system effector, Hcp YPO3710 IPR010794 Maltose operon periplasmic YPO3711 IPR003192 Porin, LamB type YPO3711 IPR023738 Maltoporin YPO3712 IPR003439 ABC transporter-like YPO3712 IPR003593 AAA+ ATPase domain YPO3712 IPR008995 Molybdate/tungstate binding, C-terminal YPO3712 IPR012340 Nucleic acid-binding, OB-fold YPO3712 IPR013611 Transport-associated OB, type 2 YPO3712 IPR017871 ABC transporter, conserved site YPO3712 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3714 IPR006060 Maltose binding protein YPO3714 IPR006061 Bacterial extracellular solute-binding family 1, conserved site YPO3715 IPR000515 MetI-like domain YPO3715 IPR029345 Maltose transport system permease protein MalF, P2 domain YPO3716 IPR000515 MetI-like domain YPO3717 IPR009315 Phosphate-starvation-induced PsiE YPO3717 IPR020948 Phosphate-starvation-induced PsiE-like YPO3718 IPR001672 Phosphoglucose isomerase (PGI) YPO3718 IPR018189 Phosphoglucose isomerase, conserved site YPO3718 IPR023096 Phosphoglucose isomerase, C-terminal YPO3719 IPR001048 Aspartate/glutamate/uridylate kinase YPO3719 IPR001341 Aspartate kinase domain YPO3719 IPR005260 Aspartate kinase, monofunctional class YPO3719 IPR018042 Aspartate kinase, conserved site YPO3720 IPR005565 Haemolysin activator HlyB YPO3720 IPR013686 Polypeptide-transport-associated, ShlB-type YPO3720 IPR027282 Two partner secretion pathway transporter YPO3721 IPR008638 Filamentous haemagglutinin, N-terminal YPO3721 IPR011050 Pectin lyase fold/virulence factor YPO3721 IPR012334 Pectin lyase fold YPO3721 IPR025157 Haemagluttinin repeat YPO3722 IPR000489 Pterin-binding YPO3722 IPR003726 Homocysteine S-methyltransferase YPO3722 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain YPO3722 IPR004223 Vitamin B12-dependent methionine synthase, activation domain YPO3722 IPR006158 Cobalamin (vitamin B12)-binding domain YPO3722 IPR011005 Dihydropteroate synthase-like YPO3722 IPR011822 Cobalamin-dependent methionine synthase YPO3724 IPR010452 Isocitrate dehydrogenase kinasephosphatase YPO3725 IPR006254 Isocitrate lyase YPO3725 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain YPO3725 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site YPO3726 IPR001465 Malate synthase YPO3726 IPR006252 Malate synthase A YPO3726 IPR011076 Malate synthase-like YPO3727 IPR005697 Homoserine O-succinyltransferase YPO3727 IPR029062 Class I glutamine amidotransferase-like YPO3728 IPR002695 AICARFT/IMPCHase bienzyme YPO3728 IPR011607 Methylglyoxal synthase-like domain YPO3728 IPR016193 Cytidine deaminase-like YPO3728 IPR024051 AICAR transformylase domain YPO3729 IPR000115 Phosphoribosylglycinamide synthetase YPO3729 IPR011054 Rudiment single hybrid motif YPO3729 IPR013815 ATP-grasp fold, subdomain 1 YPO3729 IPR013816 ATP-grasp fold, subdomain 2 YPO3729 IPR016185 Pre-ATP-grasp domain YPO3729 IPR020559 Phosphoribosylglycinamide synthetase, conserved site YPO3729 IPR020560 Phosphoribosylglycinamide synthetase, C-domain YPO3729 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain YPO3729 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal YPO3730 IPR010858 Protein of unknown function DUF1481 YPO3730 IPR016500 Uncharacterised conserved protein UCP006993 YPO3731 IPR000119 Histone-like bacterial DNA-binding protein YPO3731 IPR010992 Integration host factor (IHF)-like DNA-binding domain YPO3731 IPR020816 Histone-like DNA-binding protein, conserved site YPO3732 IPR007338 Protein of unknown function DUF416 YPO3732 IPR023381 YP001051499.1-like domain YPO3733 IPR007581 Endonuclease V YPO3734 IPR000257 Uroporphyrinogen decarboxylase (URO-D) YPO3734 IPR006361 Uroporphyrinogen decarboxylase HemE YPO3736 IPR000086 NUDIX hydrolase domain YPO3736 IPR015376 Zinc ribbon, NADH pyrophosphatase YPO3736 IPR015797 NUDIX hydrolase domain-like YPO3736 IPR020084 NUDIX hydrolase, conserved site YPO3736 IPR022925 NADH pyrophosphatase NudC YPO3737 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ YPO3737 IPR023785 Regulator of RNA polymerase sigma(70) subunit, Rsd YPO3739 IPR002817 Thiamine biosynthesis protein ThiC YPO3739 IPR025747 ThiC-associated domain YPO3740 IPR003733 Thiamine phosphate synthase YPO3740 IPR013785 Aldolase-type TIM barrel YPO3740 IPR022998 Thiamin phosphate synthase superfamily YPO3741 IPR000594 UBA/THIF-type NAD/FAD binding fold YPO3741 IPR016040 NAD(P)-binding domain YPO3741a IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 YPO3741a IPR010035 ThiS, thiamine-biosynthesis YPO3741a IPR012675 Beta-grasp domain YPO3741a IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp YPO3742 IPR008867 Thiazole biosynthesis YPO3742 IPR013785 Aldolase-type TIM barrel YPO3743 IPR007197 Radical SAM YPO3743 IPR010722 Biotin and thiamin synthesis-associated domain YPO3743 IPR012726 Thiazole biosynthesis ThiH YPO3743 IPR013785 Aldolase-type TIM barrel YPO3745 IPR002686 Transposase IS200-like YPO3746 IPR000722 RNA polymerase, alpha subunit YPO3746 IPR006592 RNA polymerase, N-terminal YPO3746 IPR007066 RNA polymerase Rpb1, domain 3 YPO3746 IPR007080 RNA polymerase Rpb1, domain 1 YPO3746 IPR007081 RNA polymerase Rpb1, domain 5 YPO3746 IPR007083 RNA polymerase Rpb1, domain 4 YPO3746 IPR012754 DNA-directed RNA polymerase, subunit beta-prime YPO3747 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 YPO3747 IPR007121 RNA polymerase, beta subunit, conserved site YPO3747 IPR007641 RNA polymerase Rpb2, domain 7 YPO3747 IPR007642 RNA polymerase Rpb2, domain 2 YPO3747 IPR007644 RNA polymerase, beta subunit, protrusion YPO3747 IPR007645 RNA polymerase Rpb2, domain 3 YPO3747 IPR010243 DNA-directed RNA polymerase, beta subunit YPO3747 IPR014724 RNA polymerase Rpb2, OB-fold YPO3747 IPR015712 DNA-directed RNA polymerase, subunit 2 YPO3747 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain YPO3748 IPR000206 Ribosomal protein L7/L12 YPO3748 IPR008932 Ribosomal protein L7/L12, oligomerisation YPO3748 IPR013823 Ribosomal protein L7/L12, C-terminal YPO3748 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like YPO3749 IPR001790 Ribosomal protein L10/acidic P0 YPO3749 IPR002363 Ribosomal protein L10, eubacterial, conserved site YPO3749 IPR022973 Ribosomal protein L10 YPO3750 IPR002143 Ribosomal protein L1 YPO3750 IPR005878 Ribosomal protein L1, bacterial-type YPO3750 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich YPO3750 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich YPO3750 IPR023673 Ribosomal protein L1, conserved site YPO3750 IPR023674 Ribosomal protein L1-like YPO3750 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein YPO3751 IPR000911 Ribosomal protein L11/L12 YPO3751 IPR006519 Ribosomal protein L11, bacterial-type YPO3751 IPR020783 Ribosomal protein L11, C-terminal YPO3751 IPR020784 Ribosomal protein L11, N-terminal YPO3751 IPR020785 Ribosomal protein L11, conserved site YPO3752 IPR001062 Transcription antitermination protein, NusG YPO3752 IPR005824 KOW YPO3752 IPR006645 NusG, N-terminal YPO3752 IPR008991 Translation protein SH3-like domain YPO3752 IPR014722 Ribosomal protein L2 domain 2 YPO3752 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site YPO3753 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit YPO3753 IPR005807 SecE subunit of protein translocation complex YPO3753 IPR022943 Preprotein translocase subunit SecE YPO3754 IPR000795 Elongation factor, GTP-binding domain YPO3754 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal YPO3754 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 YPO3754 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle YPO3754 IPR005225 Small GTP-binding protein domain YPO3754 IPR009000 Translation protein, beta-barrel domain YPO3754 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal YPO3754 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3754 IPR031157 YPO3754 YPO3755 IPR001270 ClpA/B family YPO3755 IPR002611 IstB-like ATP-binding protein YPO3755 IPR003593 AAA+ ATPase domain YPO3755 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3755 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO3756 IPR001584 Integrase, catalytic core YPO3756 IPR006120 Resolvase, HTH domain YPO3756 IPR009057 Homeodomain-like YPO3756 IPR012337 Ribonuclease H-like domain YPO3757 IPR000182 GNAT domain YPO3757 IPR016181 Acyl-CoA N-acyltransferase YPO3758 IPR004566 Bacterial pantothenate kinase YPO3758 IPR006083 Phosphoribulokinase/uridine kinase YPO3758 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3759 IPR003142 Biotin protein ligase, C-terminal YPO3759 IPR004143 Biotin/lipoate A/B protein ligase YPO3759 IPR004408 Biotin--acetyl-CoA-carboxylase ligase YPO3759 IPR004409 Biotin operon repressor, helix-turn-helix domain YPO3759 IPR008988 Transcriptional repressor, C-terminal YPO3759 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3759 IPR013196 Helix-turn-helix, type 11 YPO3759 IPR030855 YPO3759 YPO3760 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase YPO3760 IPR006094 FAD linked oxidase, N-terminal YPO3760 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal YPO3760 IPR016166 FAD-binding, type 2 YPO3760 IPR016167 FAD-binding, type 2, subdomain 1 YPO3760 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 YPO3761 IPR001226 Flavodoxin, conserved site YPO3761 IPR026816 Flavodoxin domain YPO3761 IPR029039 Flavoprotein-like YPO3762 IPR003445 Cation transporter YPO3762 IPR004772 Potassium uptake protein TrkH family YPO3764 IPR002686 Transposase IS200-like YPO3764a IPR000640 Translation elongation factor EFG, V domain YPO3764a IPR001498 Impact, N-terminal YPO3764a IPR009022 Elongation factor G, III-V domain YPO3764a IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal YPO3764a IPR020568 Ribosomal protein S5 domain 2-type fold YPO3764a IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site YPO3764a IPR023582 Impact family YPO3765 IPR000994 Peptidase M24, structural domain YPO3765 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site YPO3765 IPR022846 Xaa-Pro dipeptidase YPO3766 IPR001753 Crotonase superfamily YPO3766 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal YPO3766 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding YPO3766 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site YPO3766 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YPO3766 IPR012799 Fatty oxidation complex, alpha subunit FadB YPO3766 IPR013328 Dehydrogenase, multihelical YPO3766 IPR016040 NAD(P)-binding domain YPO3766 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site YPO3766 IPR029045 ClpP/crotonase-like domain YPO3767 IPR002155 Thiolase YPO3767 IPR012805 Acetyl-CoA C-acyltransferase FadA YPO3767 IPR016039 Thiolase-like YPO3767 IPR020610 Thiolase, active site YPO3767 IPR020613 Thiolase, conserved site YPO3767 IPR020615 Thiolase, acyl-enzyme intermediate active site YPO3767 IPR020616 Thiolase, N-terminal YPO3767 IPR020617 Thiolase, C-terminal YPO3768 IPR001221 Phenol hydroxylase reductase YPO3768 IPR001433 Oxidoreductase FAD/NAD(P)-binding YPO3768 IPR008333 Oxidoreductase, FAD-binding domain YPO3768 IPR017938 Riboflavin synthase-like beta-barrel YPO3769 IPR002830 UbiD decarboxylyase family YPO3769 IPR012349 FMN-binding split barrel YPO3769 IPR023677 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YPO3770 IPR005824 KOW YPO3770 IPR006645 NusG, N-terminal YPO3770 IPR010215 Transcription antitermination protein RfaH YPO3771 IPR001731 Porphobilinogen synthase YPO3771 IPR013785 Aldolase-type TIM barrel YPO3771 IPR030656 YPO3771 YPO3773 IPR001270 ClpA/B family YPO3773 IPR002611 IstB-like ATP-binding protein YPO3773 IPR003593 AAA+ ATPase domain YPO3773 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3773 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO3774 IPR001584 Integrase, catalytic core YPO3774 IPR006120 Resolvase, HTH domain YPO3774 IPR009057 Homeodomain-like YPO3774 IPR012337 Ribonuclease H-like domain YPO3776 IPR002033 Sec-independent periplasmic protein translocase TatC YPO3776 IPR019820 Sec-independent periplasmic protein translocase, conserved site YPO3777 IPR003998 Twin-arginine translocation protein TatB-like YPO3777 IPR018448 Twin-arginine translocation protein TatB YPO3778 IPR003369 Sec-independent protein translocase protein TatA/B/E YPO3778 IPR006312 Sec-independent protein translocase protein TatA/E YPO3779 IPR004147 UbiB domain YPO3779 IPR010232 Probable protein kinase UbiB YPO3779 IPR011009 Protein kinase-like domain YPO3780 IPR003033 SCP2 sterol-binding domain YPO3781 IPR004033 UbiE/COQ5 methyltransferase YPO3781 IPR023576 UbiE/COQ5 methyltransferase, conserved site YPO3781 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPO3782 IPR003798 DNA recombination RmuC YPO3783 IPR032816 YPO3783 YPO3783 IPR032818 YPO3783 YPO3784 IPR003706 Carbon starvation protein CstA YPO3784 IPR025299 CstA C-terminal domain YPO3785 IPR026893 Tyrosine/serine-protein phosphatase IphP-type YPO3785 IPR029021 Protein-tyrosine phosphatase-like YPO3786 IPR000845 Nucleoside phosphorylase domain YPO3786 IPR010058 Uridine phosphorylase YPO3786 IPR018016 Nucleoside phosphorylase, conserved site YPO3786 IPR018017 Nucleoside phosphorylase YPO3787 IPR002925 Dienelactone hydrolase YPO3787 IPR029058 Alpha/Beta hydrolase fold YPO3788 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal YPO3788 IPR006276 Cobalamin-independent methionine synthase YPO3788 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal YPO3789 IPR000847 Transcription regulator HTH, LysR YPO3789 IPR005119 LysR, substrate-binding YPO3789 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3790 IPR000620 Drug/metabolite transporter YPO3790 IPR004779 Carboxylate/Amino Acid/Amine Transporter YPO3791 IPR004776 Auxin efflux carrier YPO3792 IPR004129 Glycerophosphoryl diester phosphodiesterase YPO3792 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain YPO3792 IPR030395 YPO3792 YPO3793 IPR003439 ABC transporter-like YPO3793 IPR003593 AAA+ ATPase domain YPO3793 IPR008995 Molybdate/tungstate binding, C-terminal YPO3793 IPR012340 Nucleic acid-binding, OB-fold YPO3793 IPR013611 Transport-associated OB, type 2 YPO3793 IPR017871 ABC transporter, conserved site YPO3793 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3794 IPR000515 MetI-like domain YPO3794 IPR030165 YPO3794 YPO3795 IPR000515 MetI-like domain YPO3796 IPR006061 Bacterial extracellular solute-binding family 1, conserved site YPO3797 IPR007540 Fimbrial major subunit, CS1-type YPO3798 IPR032636 YPO3798 YPO3799 IPR008962 PapD-like YPO3801 IPR007540 Fimbrial major subunit, CS1-type YPO3804 IPR003439 ABC transporter-like YPO3804 IPR003593 AAA+ ATPase domain YPO3804 IPR017871 ABC transporter, conserved site YPO3804 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3804 IPR030660 YPO3804 YPO3805 IPR003439 ABC transporter-like YPO3805 IPR003593 AAA+ ATPase domain YPO3805 IPR017871 ABC transporter, conserved site YPO3805 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3805 IPR032823 YPO3805 YPO3806 IPR001851 ABC transporter, permease YPO3806 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal YPO3807 IPR001851 ABC transporter, permease YPO3808 IPR000709 Leu/Ile/Val-binding protein YPO3808 IPR028081 Leucine-binding protein domain YPO3808 IPR028082 Periplasmic binding protein-like I YPO3809 IPR000182 GNAT domain YPO3809 IPR016181 Acyl-CoA N-acyltransferase YPO3809 IPR032900 YPO3809 YPO3810 IPR002686 Transposase IS200-like YPO3811 IPR000943 RNA polymerase sigma-70 YPO3811 IPR007627 RNA polymerase sigma-70 region 2 YPO3811 IPR007630 RNA polymerase sigma-70 region 4 YPO3811 IPR009042 RNA polymerase sigma-70 region 1.2 YPO3811 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3811 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria YPO3811 IPR013324 RNA polymerase sigma factor, region 3/4 YPO3811 IPR013325 RNA polymerase sigma factor, region 2 YPO3811 IPR014284 RNA polymerase sigma-70 like domain YPO3811 IPR016263 RNA polymerase sporulation-specific sigma factor, SigK/SigE YPO3812 IPR003838 Permease FtsX-like YPO3812 IPR004513 ABC transporter, cell division protein FtsX YPO3813 IPR003439 ABC transporter-like YPO3813 IPR003593 AAA+ ATPase domain YPO3813 IPR005286 Cell division protein FtsE, ATP-binding YPO3813 IPR017871 ABC transporter, conserved site YPO3813 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3814 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain YPO3814 IPR003593 AAA+ ATPase domain YPO3814 IPR004390 Signal-recognition particle receptor FtsY YPO3814 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle YPO3814 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3816 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPO3816 IPR004398 RNA methyltransferase, RsmD YPO3816 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPO3816a IPR009525 Protein of unknown function DUF1145 YPO3817 IPR019635 Protein of unknown function DUF2500 YPO3818 IPR014949 Protein of unknown function DUF1820 YPO3819 IPR012506 YhhN-like YPO3820 IPR001757 Cation-transporting P-type ATPase YPO3820 IPR006121 Heavy metal-associated domain, HMA YPO3820 IPR008250 P-type ATPase, A domain YPO3820 IPR017969 Heavy-metal-associated, conserved site YPO3820 IPR018303 P-type ATPase, phosphorylation site YPO3820 IPR023214 HAD-like domain YPO3820 IPR023299 P-type ATPase, cytoplasmic domain N YPO3820 IPR027256 Cation-transporting P-type ATPase, subfamily IB YPO3821 IPR001455 TusA-like domain YPO3821 IPR022931 Sulphurtransferase TusA YPO3822 IPR003744 Protein of unknown function DUF165 YPO3823 IPR014894 Protein DcrB YPO3824 IPR004017 Cysteine-rich domain YPO3824 IPR009051 Alpha-helical ferredoxin YPO3824 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit YPO3824 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPO3824 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO3825 IPR003953 FAD binding domain YPO3825 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit YPO3825 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPO3826 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase YPO3826 IPR006076 FAD dependent oxidoreductase YPO3826 IPR007419 BFD-like [2Fe-2S]-binding domain YPO3826 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit YPO3826 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPO3826 IPR031656 YPO3826 YPO3827 IPR004129 Glycerophosphoryl diester phosphodiesterase YPO3827 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain YPO3827 IPR030395 YPO3827 YPO3828 IPR004954 Peptidase M60, viral enhancin protein YPO3829 IPR000150 Cof protein YPO3829 IPR006379 HAD-superfamily hydrolase, subfamily IIB YPO3829 IPR023214 HAD-like domain YPO3830 IPR022742 Putative lysophospholipase YPO3830 IPR029058 Alpha/Beta hydrolase fold YPO3831 IPR001123 Lysine-type exporter protein (LYSE/YGGA) YPO3832 IPR001123 Lysine-type exporter protein (LYSE/YGGA) YPO3832 IPR004778 Homoserine/Threonine efflux protein YPO3833 IPR001650 Helicase, C-terminal YPO3833 IPR002121 HRDC domain YPO3833 IPR004589 DNA helicase, ATP-dependent, RecQ type YPO3833 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial YPO3833 IPR010997 HRDC-like YPO3833 IPR011545 DEAD/DEAH box helicase domain YPO3833 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3833 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YPO3833 IPR018982 RQC domain YPO3833 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3833 IPR032284 YPO3833 YPO3834 IPR003187 Phospholipase A1 YPO3835 IPR003736 Phenylacetic acid degradation-related domain YPO3835 IPR006683 Thioesterase superfamily YPO3835 IPR029069 HotDog domain YPO3836 IPR000620 Drug/metabolite transporter YPO3836 IPR004626 RarD protein YPO3837 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB YPO3837 IPR004488 Magnesium/cobalt transport protein CorA YPO3838 IPR009215 TIM-barrel domain, IGPS-like YPO3838 IPR013785 Aldolase-type TIM barrel YPO3838 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain YPO3839 IPR008322 Uncharacterised protein family UPF0261 YPO3840 IPR001647 DNA-binding HTH domain, TetR-type YPO3840 IPR009057 Homeodomain-like YPO3840 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal YPO3841 IPR000212 DNA helicase, UvrD/REP type YPO3841 IPR005753 DNA helicase, ATP-dependent, UvrD type YPO3841 IPR013986 DExx box DNA helicase domain YPO3841 IPR014016 UvrD-like Helicase, ATP-binding domain YPO3841 IPR014017 DNA helicase, UvrD-like, C-terminal YPO3841 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3842 IPR006439 HAD hydrolase, subfamily IA YPO3842 IPR023214 HAD-like domain YPO3843 IPR002104 Integrase, catalytic YPO3843 IPR004107 Integrase, SAM-like, N-terminal YPO3843 IPR010998 Integrase, Lambda-type, N-terminal YPO3843 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPO3843 IPR011931 Tyrosine recombinase XerC YPO3843 IPR013762 Integrase-like, catalytic core YPO3843 IPR023009 Tyrosine recombinase XerC/XerD YPO3843 IPR023109 Integrase/recombinase, N-terminal YPO3844 IPR007435 Protein of unknown function DUF484 YPO3845 IPR001653 Diaminopimelate epimerase, DapF YPO3845 IPR018510 Diaminopimelate epimerase, active site YPO3846 IPR032831 YPO3846 YPO3847 IPR002908 Frataxin/CyaY YPO3847 IPR020895 Frataxin conserved site YPO3848 IPR000274 Adenylate cyclase, class-I YPO3848 IPR024685 Adenylate cyclase class-I, N-terminal domain YPO3848 IPR024686 Adenylate cyclase class-I, conserved site YPO3849 IPR000860 Tetrapyrrole biosynthesis, hydroxymethylbilane synthase YPO3849 IPR022417 Porphobilinogen deaminase, N-terminal YPO3849 IPR022418 Porphobilinogen deaminase, C-terminal YPO3849 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site YPO3850 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase YPO3851 IPR007470 HemX YPO3852 IPR005254 Heme biosynthesis-associated TPR protein YPO3852 IPR010817 HemY, N-terminal YPO3852 IPR011990 Tetratricopeptide-like helical domain YPO3853 IPR002686 Transposase IS200-like YPO3854 IPR002293 Amino acid/polyamine transporter I YPO3854 IPR004840 Amino acid permease, conserved site YPO3854 IPR004841 Amino acid permease/ SLC12A domain YPO3855 IPR004629 Glycosyl transferase WecB/TagA/CpsF YPO3855 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase YPO3856 IPR010691 Uncharacterised protein family WzyE YPO3857 IPR009993 4-alpha-L-fucosyltransferase YPO3858 IPR002797 Polysaccharide biosynthesis protein YPO3858 IPR032896 YPO3858 YPO3859 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase YPO3859 IPR012749 TDP-4-keto-6-deoxy-D-glucose transaminase YPO3859 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPO3859 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPO3859 IPR015424 Pyridoxal phosphate-dependent transferase YPO3859 IPR032894 YPO3859 YPO3860 IPR000182 GNAT domain YPO3860 IPR012752 TDP-D-fucosamine acetyltransferase WecD YPO3860 IPR016181 Acyl-CoA N-acyltransferase YPO3861 IPR005835 Nucleotidyl transferase YPO3861 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form YPO3861 IPR029044 Nucleotide-diphospho-sugar transferases YPO3862 IPR005888 dTDP-glucose 4,6-dehydratase YPO3862 IPR016040 NAD(P)-binding domain YPO3863 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal YPO3863 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YPO3863 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation YPO3863 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal YPO3863 IPR016040 NAD(P)-binding domain YPO3863 IPR017476 UDP-glucose/GDP-mannose dehydrogenase YPO3863 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase YPO3863 IPR032891 YPO3863 YPO3864 IPR003331 UDP-N-acetylglucosamine 2-epimerase YPO3864 IPR029767 UDP-N-acetylglucosamine 2-epimerase, WecB-type YPO3864 IPR032892 YPO3864 YPO3865 IPR003856 Lipopolysaccharide biosynthesis YPO3865 IPR032895 YPO3865 YPO3866 IPR000715 Glycosyl transferase, family 4 YPO3866 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase YPO3867 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain YPO3867 IPR003593 AAA+ ATPase domain YPO3867 IPR004665 Transcription termination factor Rho YPO3867 IPR011112 Rho termination factor, N-terminal YPO3867 IPR011113 Rho termination factor, RNA-binding YPO3867 IPR011129 Cold shock protein YPO3867 IPR012340 Nucleic acid-binding, OB-fold YPO3867 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3868 IPR005746 Thioredoxin YPO3868 IPR012336 Thioredoxin-like fold YPO3868 IPR013766 Thioredoxin domain YPO3868 IPR017937 Thioredoxin, conserved site YPO3869 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site YPO3869 IPR001650 Helicase, C-terminal YPO3869 IPR011545 DEAD/DEAH box helicase domain YPO3869 IPR014001 Helicase, superfamily 1/2, ATP-binding domain YPO3869 IPR023554 RNA helicase, ATP-dependent, RhlB-type YPO3869 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3872 IPR000212 DNA helicase, UvrD/REP type YPO3872 IPR005752 DNA helicase, ATP-dependent, RepA type YPO3872 IPR013986 DExx box DNA helicase domain YPO3872 IPR014016 UvrD-like Helicase, ATP-binding domain YPO3872 IPR014017 DNA helicase, UvrD-like, C-terminal YPO3872 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3874 IPR007788 Glutamine cyclotransferase YPO3874 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like YPO3874 IPR015943 WD40/YVTN repeat-like-containing domain YPO3875 IPR001207 Transposase, mutator type YPO3877 IPR000259 Fimbrial-type adhesion domain YPO3877 IPR008966 Adhesion domain YPO3878 IPR001829 Pili assembly chaperone, bacterial YPO3878 IPR008962 PapD-like YPO3878 IPR016147 PapD, N-terminal, bacterial YPO3878 IPR016148 Pili assembly chaperone, C-terminal domain YPO3879 IPR000015 Outer membrane usher protein YPO3879 IPR018030 Fimbrial membrane usher, conserved site YPO3879 IPR025885 PapC, N-terminal domain YPO3879 IPR025949 PapC-like, C-terminal domain YPO3880 IPR000259 Fimbrial-type adhesion domain YPO3880 IPR008966 Adhesion domain YPO3880 IPR011228 Uncharacterised conserved protein UCP029766 YPO3881 IPR001829 Pili assembly chaperone, bacterial YPO3881 IPR008962 PapD-like YPO3881 IPR016147 PapD, N-terminal, bacterial YPO3881 IPR016148 Pili assembly chaperone, C-terminal domain YPO3881 IPR018046 Pili assembly chaperone, conserved site YPO3883 IPR000290 Colicin immunity protein/pyocin immunity protein YPO3883 IPR023802 Colicin/pyocin immunity protein domain YPO3888 IPR000506 Acetohydroxy acid isomeroreductase C-terminal YPO3888 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YPO3888 IPR013023 Acetohydroxy acid isomeroreductase YPO3888 IPR013116 Acetohydroxy acid isomeroreductase, catalytic YPO3888 IPR013328 Dehydrogenase, multihelical YPO3888 IPR016040 NAD(P)-binding domain YPO3889 IPR000847 Transcription regulator HTH, LysR YPO3889 IPR005119 LysR, substrate-binding YPO3889 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3893 IPR010351 Protein of unknown function DUF943 YPO3894 IPR010351 Protein of unknown function DUF943 YPO3895 IPR010351 Protein of unknown function DUF943 YPO3896 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site YPO3896 IPR001721 ACT-like domain YPO3896 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPO3896 IPR005787 Threonine dehydratase, biosynthetic YPO3897 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase YPO3897 IPR004404 Dihydroxy-acid dehydratase YPO3897 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel YPO3897 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site YPO3899 IPR001544 Aminotransferase, class IV YPO3899 IPR005785 Branched-chain amino acid aminotransferase I YPO3899 IPR018300 Aminotransferase, class IV, conserved site YPO3901 IPR000399 TPP-binding enzyme, conserved site YPO3901 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding YPO3901 IPR012000 Thiamine pyrophosphate enzyme, central domain YPO3901 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain YPO3901 IPR012846 Acetolactate synthase, large subunit, biosynthetic YPO3901 IPR029035 DHS-like NAD/FAD-binding domain YPO3901 IPR029061 Thiamin diphosphate-binding fold YPO3902 IPR000523 Magnesium chelatase, ChlI subunit YPO3902 IPR001208 Mini-chromosome maintenance, DNA-dependent ATPase YPO3902 IPR003593 AAA+ ATPase domain YPO3902 IPR004482 Mg chelatase-related protein YPO3902 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPO3902 IPR020568 Ribosomal protein S5 domain 2-type fold YPO3902 IPR025158 Mg chelatase-related protein, C-terminal domain YPO3902 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3903 IPR007335 Protein of unknown function DUF413 YPO3904 IPR000847 Transcription regulator HTH, LysR YPO3904 IPR005119 LysR, substrate-binding YPO3904 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3904 IPR020890 Transcription regulator HTH, HdfR YPO3905 IPR001851 ABC transporter, permease YPO3906 IPR001851 ABC transporter, permease YPO3907 IPR003439 ABC transporter-like YPO3907 IPR003593 AAA+ ATPase domain YPO3907 IPR017871 ABC transporter, conserved site YPO3907 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3908 IPR025997 Periplasmic binding protein domain YPO3908 IPR028082 Periplasmic binding protein-like I YPO3909 IPR001920 Asp/Glu racemase YPO3909 IPR004391 Glutamate racemase YPO3909 IPR015942 Asp/Glu/hydantoin racemase YPO3909 IPR018187 Asp/Glu racemase, active site YPO3909 IPR033134 YPO3909 YPO3910 IPR000531 TonB-dependent receptor, beta-barrel YPO3910 IPR010101 TonB-dependent vitamin B12 transporter BtuB YPO3910 IPR010917 TonB-dependent receptor, conserved site YPO3910 IPR012910 TonB-dependent receptor, plug YPO3911 IPR010280 (Uracil-5)-methyltransferase family YPO3911 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA YPO3911 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPO3911 IPR030390 YPO3911 YPO3911 IPR030391 YPO3911 YPO3912 IPR009867 Protein of unknown function DUF1422 YPO3913 IPR001647 DNA-binding HTH domain, TetR-type YPO3913 IPR009057 Homeodomain-like YPO3913 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal YPO3913 IPR023764 Transcriptional repressor HTH, FabR YPO3914 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YPO3914 IPR016156 FAD/NAD-linked reductase, dimerisation domain YPO3914 IPR022962 Soluble pyridine nucleotide transhydrogenase YPO3914 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPO3915 IPR000847 Transcription regulator HTH, LysR YPO3915 IPR005119 LysR, substrate-binding YPO3915 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3916 IPR002109 Glutaredoxin YPO3916 IPR011767 Glutaredoxin active site YPO3916 IPR011906 Glutaredoxin domain YPO3916 IPR012336 Thioredoxin-like fold YPO3916 IPR013740 Redoxin YPO3916 IPR014025 Glutaredoxin subgroup YPO3917 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YPO3917 IPR016156 FAD/NAD-linked reductase, dimerisation domain YPO3917 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPO3918 IPR006260 TonB, C-terminal YPO3919 IPR003997 RTX secretion protein D, Gram-negative bacteria YPO3919 IPR006144 Secretion protein HlyD, conserved site YPO3919 IPR010129 Type I secretion membrane fusion protein, HlyD YPO3920 IPR003439 ABC transporter-like YPO3920 IPR003593 AAA+ ATPase domain YPO3920 IPR010128 ATPase, type I secretion system, PrtD YPO3920 IPR011527 ABC transporter type 1, transmembrane domain YPO3920 IPR017871 ABC transporter, conserved site YPO3920 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3922 IPR010495 Haem-binding HasA YPO3923 IPR000531 TonB-dependent receptor, beta-barrel YPO3923 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor YPO3923 IPR011276 TonB-dependent haem/haemoglobin receptor YPO3923 IPR012910 TonB-dependent receptor, plug YPO3924 IPR000362 Fumarate lyase family YPO3924 IPR008948 L-Aspartase-like YPO3924 IPR009049 Argininosuccinate lyase YPO3924 IPR020557 Fumarate lyase, conserved site YPO3924 IPR022761 Fumarate lyase, N-terminal YPO3924 IPR024083 Fumarase/histidase, N-terminal YPO3924 IPR029419 Argininosuccinate lyase, C-terminal YPO3925 IPR001048 Aspartate/glutamate/uridylate kinase YPO3925 IPR004662 Acetylglutamate kinase YPO3927 IPR000534 Semialdehyde dehydrogenase, NAD-binding YPO3927 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 YPO3927 IPR012280 Semialdehyde dehydrogenase, dimerisation domain YPO3927 IPR016040 NAD(P)-binding domain YPO3927 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site YPO3928 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site YPO3928 IPR002933 Peptidase M20 YPO3928 IPR010169 Acetylornithine deacetylase (ArgE) YPO3928 IPR011650 Peptidase M20, dimerisation domain YPO3929 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain YPO3929 IPR018129 Phosphoenolpyruvate carboxylase, active site YPO3929 IPR021135 Phosphoenolpyruvate carboxylase YPO3929 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type YPO3929 IPR033129 YPO3929 YPO3931 IPR009057 Homeodomain-like YPO3931 IPR010921 Trp repressor/replication initiator YPO3931 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3932 IPR001584 Integrase, catalytic core YPO3932 IPR012337 Ribonuclease H-like domain YPO3932 IPR025948 HTH-like domain YPO3935 IPR010351 Protein of unknown function DUF943 YPO3937 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase YPO3937 IPR006076 FAD dependent oxidoreductase YPO3937 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPO3937 IPR031656 YPO3937 YPO3938 IPR000811 Glycosyl transferase, family 35 YPO3938 IPR011833 Glycogen/starch/alpha-glucan phosphorylase YPO3939 IPR001296 Glycosyl transferase, family 1 YPO3939 IPR011835 Glycogen/starch synthase, ADP-glucose type YPO3939 IPR013534 Starch synthase, catalytic domain YPO3940 IPR005835 Nucleotidyl transferase YPO3940 IPR005836 ADP-glucose pyrophosphorylase, conserved site YPO3940 IPR011004 Trimeric LpxA-like YPO3940 IPR011831 Glucose-1-phosphate adenylyltransferase YPO3940 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial YPO3940 IPR029044 Nucleotide-diphospho-sugar transferases YPO3941 IPR004193 Glycoside hydrolase, family 13, N-terminal YPO3941 IPR006047 Glycosyl hydrolase, family 13, catalytic domain YPO3941 IPR011837 Glycogen debranching enzyme, GlgX type YPO3941 IPR013780 Glycosyl hydrolase, family 13, all-beta YPO3941 IPR013781 Glycoside hydrolase, catalytic domain YPO3941 IPR013783 Immunoglobulin-like fold YPO3941 IPR014756 Immunoglobulin E-set YPO3941 IPR015902 Glycoside hydrolase, family 13 YPO3941 IPR017853 Glycoside hydrolase, superfamily YPO3941 IPR022844 Glycogen debranching enzyme, bacterial YPO3942 IPR004193 Glycoside hydrolase, family 13, N-terminal YPO3942 IPR006047 Glycosyl hydrolase, family 13, catalytic domain YPO3942 IPR006048 Alpha-amylase, C-terminal all beta YPO3942 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB YPO3942 IPR013780 Glycosyl hydrolase, family 13, all-beta YPO3942 IPR013781 Glycoside hydrolase, catalytic domain YPO3942 IPR013783 Immunoglobulin-like fold YPO3942 IPR014756 Immunoglobulin E-set YPO3942 IPR015902 Glycoside hydrolase, family 13 YPO3942 IPR017853 Glycoside hydrolase, superfamily YPO3943 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO3943 IPR010559 Signal transduction histidine kinase, internal region YPO3943 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region YPO3943 IPR029016 GAF domain-like YPO3944 IPR003344 Bacterial Ig-like, group 1 YPO3944 IPR003535 Intimin/invasin bacterial adhesion mediator protein YPO3944 IPR008964 Invasin/intimin cell-adhesion YPO3944 IPR016186 C-type lectin-like YPO3944 IPR018392 LysM domain YPO3944 IPR024519 Domain of unknown function DUF3442, intimin/invasin YPO3949 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site YPO3949 IPR000534 Semialdehyde dehydrogenase, NAD-binding YPO3949 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type YPO3949 IPR012080 Aspartate-semialdehyde dehydrogenase YPO3949 IPR012280 Semialdehyde dehydrogenase, dimerisation domain YPO3949 IPR016040 NAD(P)-binding domain YPO3950 IPR002771 Multiple antibiotic resistance (MarC)-related YPO3953 IPR006001 Carbohydrate kinase, thermoresistant glucokinase YPO3953 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3953 IPR031322 YPO3953 YPO3954 IPR003474 Gluconate transporter YPO3955 IPR000843 Transcription regulator HTH, LacI YPO3955 IPR001761 Periplasmic binding protein/LacI sugar binding domain YPO3955 IPR010982 Lambda repressor-like, DNA-binding domain YPO3955 IPR028082 Periplasmic binding protein-like I YPO3956 IPR003829 Pirin, N-terminal domain YPO3956 IPR011051 RmlC-like cupin domain YPO3956 IPR012093 Pirin YPO3956 IPR014710 RmlC-like jelly roll fold YPO3958 IPR001789 Signal transduction response regulator, receiver domain YPO3958 IPR001867 Signal transduction response regulator, C-terminal YPO3958 IPR011006 CheY-like superfamily YPO3958 IPR011991 Winged helix-turn-helix DNA-binding domain YPO3958 IPR016032 Signal transduction response regulator, C-terminal effector YPO3959 IPR011611 Carbohydrate kinase PfkB YPO3959 IPR029056 Ribokinase-like YPO3960 IPR000771 Ketose-bisphosphate aldolase, class-II YPO3960 IPR013785 Aldolase-type TIM barrel YPO3961 IPR010864 Protein of unknown function DUF1498 YPO3961 IPR011051 RmlC-like cupin domain YPO3962 IPR025997 Periplasmic binding protein domain YPO3962 IPR028082 Periplasmic binding protein-like I YPO3963 IPR001851 ABC transporter, permease YPO3964 IPR003439 ABC transporter-like YPO3964 IPR003593 AAA+ ATPase domain YPO3964 IPR017871 ABC transporter, conserved site YPO3964 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO3965 IPR000014 PAS domain YPO3965 IPR001789 Signal transduction response regulator, receiver domain YPO3965 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO3965 IPR003660 HAMP linker domain YPO3965 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain YPO3965 IPR004358 Signal transduction histidine kinase-related protein, C-terminal YPO3965 IPR011006 CheY-like superfamily YPO3966 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like YPO3966 IPR023166 HI0933 insert-like domain YPO3966 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPO3967 IPR001204 Phosphate transporter YPO3968 IPR002686 Transposase IS200-like YPO3969 IPR019598 Universal stress protein B YPO3970 IPR006015 Universal stress protein A YPO3970 IPR006016 UspA YPO3970 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold YPO3971 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase YPO3971 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal YPO3971 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain YPO3971 IPR014362 Glutamate dehydrogenase YPO3971 IPR016040 NAD(P)-binding domain YPO3973 IPR006026 Peptidase, metallopeptidase YPO3973 IPR011049 Serralysin-like metalloprotease, C-terminal YPO3973 IPR013858 Peptidase M10 serralysin C-terminal domain YPO3973 IPR016294 Peptidase M10B YPO3973 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass YPO3973 IPR024079 Metallopeptidase, catalytic domain YPO3974 IPR007536 Ribosomal RNA small subunit methyltransferase J YPO3974 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPO3975 IPR001567 Peptidase M3A/M3B YPO3975 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 YPO3975 IPR024079 Metallopeptidase, catalytic domain YPO3975 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal YPO3976 IPR002052 DNA methylase, N-6 adenine-specific, conserved site YPO3976 IPR007473 Ribosomal RNA large subunit methyltransferase J YPO3976 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPO3977 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YPO3977 IPR006322 Glutathione reductase, eukaryote/bacterial YPO3977 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site YPO3977 IPR016156 FAD/NAD-linked reductase, dimerisation domain YPO3977 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPO3978 IPR008599 Putative sugar diacid recognition YPO3978 IPR009057 Homeodomain-like YPO3978 IPR025736 PucR C-terminal helix-turn-helix domain YPO3979 IPR003474 Gluconate transporter YPO3980 IPR004381 Glycerate kinase YPO3980 IPR018193 Glycerate kinase, flavodoxin-like domain YPO3981 IPR010351 Protein of unknown function DUF943 YPO3982 IPR010351 Protein of unknown function DUF943 YPO3983 IPR017483 Conserved hypothetical protein CHP03034 YPO3984 IPR004899 Pertactin, central region YPO3984 IPR005546 Autotransporter beta-domain YPO3984 IPR006315 Outer membrane autotransporter barrel YPO3984 IPR011050 Pectin lyase fold/virulence factor YPO3984 IPR012332 P22 tailspike C-terminal domain-like YPO3985 IPR005274 Inner membrane protein YhjD YPO3985 IPR017039 Virulence factor BrkB YPO3986 IPR003763 CDP-diacylglycerol pyrophosphatase YPO3986 IPR011146 HIT-like domain YPO3987 IPR007844 AsmA YPO3988 IPR001633 EAL domain YPO3989 IPR004370 4-oxalocrotonate tautomerase YPO3989 IPR014347 Tautomerase/MIF superfamily YPO3989 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type YPO3990 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site YPO3990 IPR011611 Carbohydrate kinase PfkB YPO3990 IPR029056 Ribokinase-like YPO3991 IPR007863 Peptidase M16, C-terminal domain YPO3991 IPR011237 Peptidase M16 domain YPO3991 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like YPO3991 IPR011765 Peptidase M16, N-terminal YPO3992 IPR001991 Sodium:dicarboxylate symporter YPO3992 IPR018107 Sodium:dicarboxylate symporter, conserved site YPO3992 IPR023954 C4-dicarboxylate transport protein YPO3993 IPR000421 Coagulation factor 5/8 C-terminal type domain YPO3993 IPR008979 Galactose-binding domain-like YPO3994 IPR010702 Periplasmic pectate lyase YPO3995 IPR009331 Oligogalacturonate-specific porin YPO3996 IPR000160 GGDEF domain YPO3996 IPR001633 EAL domain YPO3996 IPR003660 HAMP linker domain YPO3996 IPR029787 Nucleotide cyclase YPO3996 IPR033419 YPO3996 YPO3999 IPR003439 ABC transporter-like YPO3999 IPR003593 AAA+ ATPase domain YPO3999 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YPO3999 IPR017871 ABC transporter, conserved site YPO3999 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO4000 IPR003439 ABC transporter-like YPO4000 IPR003593 AAA+ ATPase domain YPO4000 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal YPO4000 IPR017871 ABC transporter, conserved site YPO4000 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO4001 IPR000515 MetI-like domain YPO4001 IPR025966 Oligopeptide transport permease C-like, N-terminal domain YPO4002 IPR000515 MetI-like domain YPO4003 IPR000914 Bacterial extracellular solute-binding protein, family 5 YPO4003 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site YPO4003 IPR030678 YPO4003 YPO4005 IPR005565 Haemolysin activator HlyB YPO4005 IPR013686 Polypeptide-transport-associated, ShlB-type YPO4005 IPR027282 Two partner secretion pathway transporter YPO4006 IPR008638 Filamentous haemagglutinin, N-terminal YPO4006 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat YPO4006 IPR011050 Pectin lyase fold/virulence factor YPO4006 IPR012334 Pectin lyase fold YPO4007 IPR000849 Sugar phosphate transporter YPO4007 IPR011701 Major facilitator superfamily YPO4007 IPR020846 Major facilitator superfamily domain YPO4009 IPR001270 ClpA/B family YPO4009 IPR002611 IstB-like ATP-binding protein YPO4009 IPR003593 AAA+ ATPase domain YPO4009 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO4009 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein YPO4010 IPR001584 Integrase, catalytic core YPO4010 IPR006120 Resolvase, HTH domain YPO4010 IPR009057 Homeodomain-like YPO4010 IPR012337 Ribonuclease H-like domain YPO4012 IPR000792 Transcription regulator LuxR, C-terminal YPO4012 IPR001789 Signal transduction response regulator, receiver domain YPO4012 IPR011006 CheY-like superfamily YPO4012 IPR011991 Winged helix-turn-helix DNA-binding domain YPO4012 IPR016032 Signal transduction response regulator, C-terminal effector YPO4013 IPR000917 Sulfatase YPO4013 IPR012549 Domain of unknown function DUF1705 YPO4013 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha YPO4013 IPR017850 Alkaline-phosphatase-like, core domain YPO4014 IPR022742 Putative lysophospholipase YPO4014 IPR029058 Alpha/Beta hydrolase fold YPO4015 IPR002293 Amino acid/polyamine transporter I YPO4015 IPR004840 Amino acid permease, conserved site YPO4015 IPR004841 Amino acid permease/ SLC12A domain YPO4016 IPR001106 Aromatic amino acid lyase YPO4016 IPR005921 Histidine ammonia-lyase YPO4016 IPR008948 L-Aspartase-like YPO4016 IPR022313 Phenylalanine/histidine ammonia-lyases, active site YPO4016 IPR024083 Fumarase/histidase, N-terminal YPO4017 IPR023636 Urocanase conserved site YPO4017 IPR023637 Urocanase YPO4018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPO4019 IPR000836 Phosphoribosyltransferase domain YPO4019 IPR029057 Phosphoribosyltransferase-like YPO4020 IPR000620 Drug/metabolite transporter YPO4021 IPR013816 ATP-grasp fold, subdomain 2 YPO4022 IPR002491 ABC transporter periplasmic binding domain YPO4023 IPR000522 ABC transporter, permease protein YPO4023 IPR029022 ABC transporter, BtuC-like YPO4024 IPR000522 ABC transporter, permease protein YPO4024 IPR029022 ABC transporter, BtuC-like YPO4025 IPR003439 ABC transporter-like YPO4025 IPR003593 AAA+ ATPase domain YPO4025 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO4028 IPR001387 Cro/C1-type helix-turn-helix domain YPO4028 IPR010982 Lambda repressor-like, DNA-binding domain YPO4031 IPR007684 Zinc finger, Ogr/Delta-type YPO4033 IPR002104 Integrase, catalytic YPO4033 IPR011010 DNA breaking-rejoining enzyme, catalytic core YPO4033 IPR013762 Integrase-like, catalytic core YPO4033 IPR023109 Integrase/recombinase, N-terminal YPO4033 IPR025166 Domain of unknown function DUF4102 YPO4034 IPR009057 Homeodomain-like YPO4034 IPR018060 DNA binding HTH domain, AraC-type YPO4034 IPR018062 HTH domain AraC-type, conserved site YPO4034 IPR020449 Transcription regulator HTH, AraC- type YPO4034 IPR028082 Periplasmic binding protein-like I YPO4035 IPR001851 ABC transporter, permease YPO4036 IPR003439 ABC transporter-like YPO4036 IPR003593 AAA+ ATPase domain YPO4036 IPR013455 ABC transporter, D-xylose, ATP-binding protein YPO4036 IPR017871 ABC transporter, conserved site YPO4036 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO4037 IPR013456 D-xylose ABC transporter, substrate-binding protein YPO4037 IPR025997 Periplasmic binding protein domain YPO4037 IPR028082 Periplasmic binding protein-like I YPO4038 IPR001998 Xylose isomerase YPO4038 IPR013022 Xylose isomerase-like, TIM barrel domain YPO4038 IPR013452 Xylose isomerase, bacterial-type YPO4039 IPR000577 YPO4039 YPO4039 IPR006000 Xylulokinase YPO4039 IPR018483 Carbohydrate kinase, FGGY, conserved site YPO4039 IPR018484 Carbohydrate kinase, FGGY, N-terminal YPO4039 IPR018485 Carbohydrate kinase, FGGY, C-terminal YPO4040 IPR000259 Fimbrial-type adhesion domain YPO4040 IPR008966 Adhesion domain YPO4041 IPR001829 Pili assembly chaperone, bacterial YPO4041 IPR008962 PapD-like YPO4041 IPR016147 PapD, N-terminal, bacterial YPO4041 IPR016148 Pili assembly chaperone, C-terminal domain YPO4041 IPR018046 Pili assembly chaperone, conserved site YPO4044 IPR000259 Fimbrial-type adhesion domain YPO4044 IPR008966 Adhesion domain YPO4045 IPR002656 Acyltransferase 3 YPO4045 IPR032905 YPO4045 YPO4046 IPR009057 Homeodomain-like YPO4046 IPR010921 Trp repressor/replication initiator YPO4046 IPR011991 Winged helix-turn-helix DNA-binding domain YPO4047 IPR001584 Integrase, catalytic core YPO4047 IPR012337 Ribonuclease H-like domain YPO4047 IPR025948 HTH-like domain YPO4048 IPR011701 Major facilitator superfamily YPO4048 IPR020846 Major facilitator superfamily domain YPO4049 IPR025320 Protein of unknown function DUF4225 YPO4054 IPR004534 L-seryl-tRNA selenium transferase YPO4054 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPO4054 IPR015424 Pyridoxal phosphate-dependent transferase YPO4054 IPR018319 L-seryl-tRNA selenium transferase-like YPO4054 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain YPO4055 IPR006452 Formate dehydrogenase accessory protein YPO4055 IPR024064 FdhE-like YPO4056 IPR006471 Formate dehydrogenase, gamma subunit YPO4056 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase YPO4056 IPR016174 Di-haem cytochrome, transmembrane YPO4057 IPR006470 Formate dehydrogenase, beta subunit YPO4057 IPR014603 Formate dehydrogenase, iron-sulphur subunit YPO4057 IPR015246 Formate dehydrogenase, transmembrane YPO4057 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain YPO4057 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site YPO4060 IPR003786 Protein FdhD YPO4060 IPR016193 Cytidine deaminase-like YPO4061 IPR001189 Manganese/iron superoxide dismutase YPO4061 IPR019831 Manganese/iron superoxide dismutase, N-terminal YPO4061 IPR019832 Manganese/iron superoxide dismutase, C-terminal YPO4061 IPR019833 Manganese/iron superoxide dismutase, binding site YPO4062 IPR003660 HAMP linker domain YPO4062 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain YPO4062 IPR004090 Chemotaxis methyl-accepting receptor YPO4062 IPR032255 YPO4062 YPO4064 IPR019545 DM13 domain YPO4065 IPR021230 Protein of unknown function DUF2810 YPO4066 IPR007761 Mannitol repressor YPO4067 IPR000669 Mannitol dehydrogenase YPO4067 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like YPO4067 IPR013118 Mannitol dehydrogenase, C-terminal YPO4067 IPR013131 Mannitol dehydrogenase, N-terminal YPO4067 IPR013328 Dehydrogenase, multihelical YPO4067 IPR016040 NAD(P)-binding domain YPO4067 IPR023027 Mannitol dehydrogenase, conserved site YPO4067 IPR023028 Mannitol-1-phosphate 5-dehydrogenase YPO4068 IPR002178 PTS EIIA type-2 domain YPO4068 IPR003352 Phosphotransferase system, EIIC YPO4068 IPR003501 Phosphotransferase system, EIIB component, type 2/3 YPO4068 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC YPO4068 IPR016152 Phosphotransferase/anion transporter YPO4068 IPR029503 Phosphotransferase system EIIB component, mannitol-specific YPO4070 IPR021413 Protein of unknown function DUF3053 YPO4071 IPR008909 DALR anticodon binding YPO4071 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding YPO4071 IPR015944 Glycine-tRNA ligase, beta subunit YPO4072 IPR002310 Glycine-tRNA ligase, alpha subunit YPO4074 IPR004597 DNA-3-methyladenine glycosylase I YPO4074 IPR005019 Methyladenine glycosylase YPO4074 IPR011257 DNA glycosylase YPO4075 IPR000182 GNAT domain YPO4075 IPR016181 Acyl-CoA N-acyltransferase YPO4076 IPR006664 Outer membrane protein, bacterial YPO4076 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal YPO4077 IPR011991 Winged helix-turn-helix DNA-binding domain YPO4078 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YPO4078 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain YPO4078 IPR016040 NAD(P)-binding domain YPO4078 IPR023756 Glyoxylate/hydroxypyruvate reductase B YPO4078 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 YPO4078 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site YPO4080 IPR006047 Glycosyl hydrolase, family 13, catalytic domain YPO4080 IPR013781 Glycoside hydrolase, catalytic domain YPO4080 IPR014635 Alpha-amylase, MalS type YPO4080 IPR015902 Glycoside hydrolase, family 13 YPO4080 IPR017853 Glycoside hydrolase, superfamily YPO4082 IPR004839 Aminotransferase, class I/classII YPO4082 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 YPO4082 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 YPO4082 IPR015424 Pyridoxal phosphate-dependent transferase YPO4083 IPR006037 Regulator of K+ conductance, C-terminal YPO4083 IPR006512 YidE/YbjL duplication YPO4083 IPR023018 Transport protein YidE, putative YPO4084 IPR002068 Alpha crystallin/Hsp20 domain YPO4084 IPR008978 HSP20-like chaperone YPO4084 IPR022848 Small heat shock protein IbpB YPO4084 IPR031107 YPO4084 YPO4085 IPR002068 Alpha crystallin/Hsp20 domain YPO4085 IPR008978 HSP20-like chaperone YPO4085 IPR023728 Small heat shock protein IbpA YPO4085 IPR031107 YPO4085 YPO4086 IPR010780 Protein of unknown function DUF1375 YPO4089 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site YPO4089 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme YPO4090 IPR003462 Ornithine cyclodeaminase/mu-crystallin YPO4090 IPR016040 NAD(P)-binding domain YPO4090 IPR023401 Ornithine cyclodeaminase, N-terminal YPO4091 IPR009057 Homeodomain-like YPO4091 IPR010921 Trp repressor/replication initiator YPO4091 IPR011991 Winged helix-turn-helix DNA-binding domain YPO4092 IPR001584 Integrase, catalytic core YPO4092 IPR012337 Ribonuclease H-like domain YPO4092 IPR025948 HTH-like domain YPO4093 IPR000150 Cof protein YPO4093 IPR006379 HAD-superfamily hydrolase, subfamily IIB YPO4093 IPR023214 HAD-like domain YPO4094 IPR000565 DNA topoisomerase, type IIA, subunit B YPO4094 IPR001241 DNA topoisomerase, type IIA YPO4094 IPR002288 DNA gyrase B subunit, C-terminal YPO4094 IPR003594 Histidine kinase-like ATPase, C-terminal domain YPO4094 IPR006171 Toprim domain YPO4094 IPR011557 DNA gyrase, subunit B YPO4094 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 YPO4094 IPR013759 DNA topoisomerase, type IIA, central domain YPO4094 IPR013760 DNA topoisomerase, type IIA-like domain YPO4094 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPO4094 IPR018522 DNA topoisomerase, type IIA, conserved site YPO4094 IPR020568 Ribosomal protein S5 domain 2-type fold YPO4095 IPR001238 DNA-binding, RecF YPO4095 IPR003395 RecF/RecN/SMC, N-terminal YPO4095 IPR018078 DNA-binding, RecF, conserved site YPO4095 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO4096 IPR001001 DNA polymerase III, beta chain YPO4096 IPR022634 DNA polymerase III, beta chain, N-terminal YPO4096 IPR022635 DNA polymerase III, beta chain, C-terminal YPO4096 IPR022637 DNA polymerase III, beta chain, central YPO4097 IPR001957 Chromosomal replication control, initiator DnaA YPO4097 IPR003593 AAA+ ATPase domain YPO4097 IPR010921 Trp repressor/replication initiator YPO4097 IPR013159 Chromosomal replication initiator, DnaA C-terminal YPO4097 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) YPO4097 IPR018312 Chromosomal replication control, initiator DnaA, conserved site YPO4097 IPR020591 Chromosomal replication control, initiator DnaA-like YPO4097 IPR024633 DnaA N-terminal domain YPO4097 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO4100 IPR000271 Ribosomal protein L34 YPO4100 IPR020939 Ribosomal protein L34, conserved site YPO4101 IPR000100 Ribonuclease P YPO4101 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup YPO4101 IPR020539 Ribonuclease P, conserved site YPO4101 IPR020568 Ribosomal protein S5 domain 2-type fold YPO4102 IPR001708 Membrane insertase OXA1/ALB3/YidC YPO4102 IPR019998 Membrane insertase YidC YPO4102 IPR028053 Membrane insertase YidC, N-terminal YPO4102 IPR028055 Membrane insertase YidC/Oxa1, C-terminal YPO4103 IPR004520 tRNA modification GTPase MnmE YPO4103 IPR005225 Small GTP-binding protein domain YPO4103 IPR006073 GTP binding domain YPO4103 IPR018948 GTP-binding protein TrmE, N-terminal YPO4103 IPR025867 tRNA modification GTPase MnmE C-terminal domain YPO4103 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 YPO4103 IPR027368 tRNA modification GTPase MnmE domain 2 YPO4103 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO4104 IPR010758 Trans-2-enoyl-CoA reductase YPO4104 IPR024906 Enoyl reductase FAD binding domain YPO4104 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative YPO4107 IPR006043 Xanthine/uracil/vitamin C permease YPO4107 IPR026033 Purine permease PbuG-like YPO4107 IPR029940 YPO4107 YPO4108 IPR006439 HAD hydrolase, subfamily IA YPO4108 IPR023214 HAD-like domain YPO4109 IPR000515 MetI-like domain YPO4109 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family YPO4110 IPR000515 MetI-like domain YPO4110 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family YPO4111 IPR001638 Extracellular solute-binding protein, family 3 YPO4111 IPR018313 Extracellular solute-binding protein, family 3, conserved site YPO4112 IPR007607 Protein of unknown function DUF583 YPO4113 IPR026022 PhoU domain YPO4113 IPR028366 Phosphate transport system protein PhoU YPO4114 IPR003439 ABC transporter-like YPO4114 IPR003593 AAA+ ATPase domain YPO4114 IPR005670 Phosphate transport system permease protein 1 YPO4114 IPR017871 ABC transporter, conserved site YPO4114 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO4115 IPR000515 MetI-like domain YPO4115 IPR005672 Phosphate transport system permease protein PstA YPO4116 IPR000515 MetI-like domain YPO4116 IPR011864 Phosphate ABC transporter, permease protein PstC YPO4117 IPR005673 ABC transporter, phosphate-binding protein PstS YPO4117 IPR024370 PBP domain YPO4118 IPR001347 Sugar isomerase (SIS) YPO4118 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising YPO4118 IPR029055 Nucleophile aminohydrolases, N-terminal YPO4119 IPR001451 Bacterial transferase hexapeptide repeat YPO4119 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase YPO4119 IPR011004 Trimeric LpxA-like YPO4119 IPR018357 Hexapeptide transferase, conserved site YPO4119 IPR025877 MobA-like NTP transferase domain YPO4119 IPR029044 Nucleotide-diphospho-sugar transferases YPO4120 IPR001469 ATPase, F1 complex, delta/epsilon subunit YPO4120 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal YPO4120 IPR020547 ATPase, F1 complex, delta/epsilon subunit, C-terminal domain YPO4121 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain YPO4121 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal YPO4121 IPR003593 AAA+ ATPase domain YPO4121 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain YPO4121 IPR005722 ATPase, F1 complex, beta subunit YPO4121 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site YPO4121 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal YPO4121 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO4122 IPR000131 ATPase, F1 complex, gamma subunit YPO4122 IPR023632 ATPase, F1 complex, gamma subunit conserved site YPO4122 IPR023633 ATPase, F1 complex, gamma subunit domain YPO4123 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain YPO4123 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal YPO4123 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain YPO4123 IPR005294 ATPase, F1 complex, alpha subunit YPO4123 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site YPO4123 IPR023366 ATP synthase subunit alpha-like domain YPO4123 IPR027417 P-loop containing nucleoside triphosphate hydrolase YPO4124 IPR000711 ATPase, OSCP/delta subunit YPO4124 IPR020781 ATPase, OSCP/delta subunit, conserved site YPO4124 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain YPO4125 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast YPO4125 IPR005864 ATPase, F0 complex, subunit B, bacterial YPO4125 IPR028987 F-type ATP synthase subunit B-like, membrane domain YPO4126 IPR000454 ATPase, F0 complex, subunit C YPO4126 IPR002379 V-ATPase proteolipid subunit C-like domain YPO4126 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast YPO4126 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site YPO4127 IPR000568 ATPase, F0 complex, subunit A YPO4127 IPR023011 ATPase, F0 complex, subunit A, active site YPO4128 IPR005598 ATP synthase protein I YPO4129 IPR003682 rRNA small subunit methyltransferase G YPO4129 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like YPO4130 IPR002218 Glucose-inhibited division protein A-related YPO4130 IPR004416 Glucose-inhibited division protein A YPO4130 IPR020595 Glucose-inhibited division protein A-related, conserved site YPO4130 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YPO4130 IPR026904 GidA associated domain 3 YPO828a IPR002686 Transposase IS200-like YPPCP1.06 IPR003855 K+ potassium transporter