YOP2083	PF00589	Phage integrase family
YOP2083	PF12167	YOP2083
YP02742	PF14559	Tetratricopeptide repeat
YPCD1.57	PF00583	Acetyltransferase (GNAT) family
YPCD1.57	PF09500	Putative thioesterase (yiiD_Cterm)
YPCD1.65	PF03616	YPCD1.65
YPMT1.15c	PF12804	MobA-like NTP transferase domain
YPMT1.46c	PF00270	DEAD/DEAH box helicase
YPMT1.49Ac	PF02824	TGS domain
YPMT1.50c	PF04607	Region found in RelA / SpoT proteins
YPMT1.50c	PF13328	HD domain
YPMT1.56c	PF03755	YPMT1.56c
YPMT1.60c	PF02441	Flavoprotein
YPMT1.68A	PF00155	Aminotransferase class I and II
YPO0001	PF00258	Flavodoxin
YPO0002	PF01037	AsnC family
YPO0002	PF13412	Winged helix-turn-helix DNA-binding
YPO0003	PF03590	Aspartate-ammonia ligase
YPO0004	PF05762	VWA domain containing CoxE-like protein
YPO0005	PF07728	AAA domain (dynein-related subfamily)
YPO0005	PF12592	Protein of unknown function (DUF3763)
YPO0006	PF02705	YPO0006
YPO0007	PF05025	RbsD / FucU transport protein family
YPO0008	PF00294	pfkB family carbohydrate kinase
YPO0009	PF07690	Major Facilitator Superfamily
YPO0010	PF00392	Bacterial regulatory proteins, gntR family
YPO0010	PF07729	FCD domain
YPO0011	PF00872	YPO0011
YPO0012	PF03205	Molybdopterin guanine dinucleotide synthesis protein B
YPO0013	PF12804	MobA-like NTP transferase domain
YPO0013a	PF06288	Protein of unknown function (DUF1040)
YPO0014	PF01636	Phosphotransferase enzyme family
YPO0015	PF01323	DSBA-like thioredoxin domain
YPO0017	PF00476	DNA polymerase family A
YPO0017	PF01367	5'-3' exonuclease, C-terminal SAM fold
YPO0017	PF01612	3'-5' exonuclease
YPO0017	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
YPO0018	PF01797	Transposase IS200 like
YPO0019	PF01926	50S ribosome-binding GTPase
YPO0020	PF04220	YPO0020
YPO0021	PF04055	Radical SAM superfamily
YPO0021	PF06969	HemN C-terminal domain
YPO0022	PF00072	Response regulator receiver domain
YPO0022	PF00158	Sigma-54 interaction domain
YPO0022	PF02954	Bacterial regulatory protein, Fis family
YPO0023	PF00512	His Kinase A (phospho-acceptor) domain
YPO0023	PF00989	PAS fold
YPO0023	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YPO0024	PF00120	Glutamine synthetase, catalytic domain
YPO0024	PF03951	Glutamine synthetase, beta-Grasp domain
YPO0026	PF00009	Elongation factor Tu GTP binding domain
YPO0026	PF00679	Elongation factor G C-terminus
YPO0026	PF03144	Elongation factor Tu domain 2
YPO0027	PF13419	Haloacid dehalogenase-like hydrolase
YPO0028	PF03631	YPO0028
YPO0029	PF02580	D-Tyr-tRNA(Tyr) deacylase
YPO0030	PF01695	IstB-like ATP binding protein
YPO0031	PF00665	Integrase core domain
YPO0031	PF02796	Helix-turn-helix domain of resolvase
YPO0032	PF00583	Acetyltransferase (GNAT) family
YPO0032	PF09500	Putative thioesterase (yiiD_Cterm)
YPO0034	PF00860	Permease family
YPO0035	PF03616	YPO0035
YPO0036	PF00270	DEAD/DEAH box helicase
YPO0036	PF00271	Helicase conserved C-terminal domain
YPO0036	PF17191	YPO0036
YPO0037	PF00588	SpoU rRNA Methylase family
YPO0037	PF12105	SpoU, rRNA methylase, C-terminal
YPO0038	PF02824	TGS domain
YPO0038	PF04607	Region found in RelA / SpoT proteins
YPO0038	PF13291	ACT domain
YPO0038	PF13328	HD domain
YPO0039	PF01192	RNA polymerase Rpb6
YPO0040	PF00625	Guanylate kinase
YPO0041	PF01653	NAD-dependent DNA ligase adenylation domain
YPO0041	PF03120	NAD-dependent DNA ligase OB-fold domain
YPO0042	PF03458	YPO0042
YPO0043	PF03755	YPO0043
YPO0043	PF08340	YPO0043
YPO0044	PF01138	3' exoribonuclease family, domain 1
YPO0044	PF03725	3' exoribonuclease family, domain 2
YPO0045	PF00156	Phosphoribosyl transferase domain
YPO0046	PF00440	Bacterial regulatory proteins, tetR family
YPO0047	PF00692	dUTPase
YPO0048	PF02441	Flavoprotein
YPO0048	PF04127	DNA / pantothenate metabolism flavoprotein
YPO0049	PF04002	RadC-like JAB domain
YPO0050	PF00830	Ribosomal L28 family
YPO0051	PF00471	Ribosomal protein L33
YPO0052	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
YPO0052	PF06827	Zinc finger found in FPG and IleRS
YPO0052	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
YPO0053	PF01467	Cytidylyltransferase
YPO0054	PF00535	Glycosyl transferase family 2
YPO0055	PF00534	Glycosyl transferases group 1
YPO0055	PF04413	3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
YPO0056	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
YPO0057	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
YPO0058	PF01370	NAD dependent epimerase/dehydratase family
YPO0059	PF00155	Aminotransferase class I and II
YPO0060	PF00107	Zinc-binding dehydrogenase
YPO0060	PF08240	Alcohol dehydrogenase GroES-like domain
YPO0063	PF01551	Peptidase family M23
YPO0064	PF01676	Metalloenzyme superfamily
YPO0064	PF06415	BPG-independent PGAM N-terminus (iPGM_N)
YPO0065	PF00581	Rhodanese-like domain
YPO0066	PF00462	Glutaredoxin
YPO0067	PF02556	Preprotein translocase subunit SecB
YPO0068	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
YPO0068	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
YPO0070	PF00132	Bacterial transferase hexapeptide (six repeats)
YPO0070	PF06426	Serine acetyltransferase, N-terminal
YPO0071	PF00588	SpoU rRNA Methylase family
YPO0072	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
YPO0072	PF02805	Metal binding domain of Ada
YPO0072	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
YPO0072	PF12833	Helix-turn-helix domain
YPO0073	PF00512	His Kinase A (phospho-acceptor) domain
YPO0073	PF00672	HAMP domain
YPO0073	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YPO0073	PF16527	YPO0073
YPO0074	PF00072	Response regulator receiver domain
YPO0074	PF00486	Transcriptional regulatory protein, C terminal
YPO0075	PF07813	LTXXQ motif family protein
YPO0076	PF04754	YPO0076
YPO0077	PF01545	Cation efflux family
YPO0077	PF16916	YPO0077
YPO0078	PF00365	Phosphofructokinase
YPO0079	PF13531	Bacterial extracellular solute-binding protein
YPO0080	PF13531	Bacterial extracellular solute-binding protein
YPO0081	PF00939	Sodium:sulfate symporter transmembrane region
YPO0082	PF03737	Demethylmenaquinone methyltransferase
YPO0083	PF02585	GlcNAc-PI de-N-acetylase
YPO0084	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
YPO0084	PF03466	LysR substrate binding domain
YPO0085	PF00121	Triosephosphate isomerase
YPO0086	PF07305	YPO0086
YPO0087	PF05656	YPO0087
YPO0088	PF00175	Oxidoreductase NAD-binding domain
YPO0088	PF00970	Oxidoreductase FAD-binding domain
YPO0089	PF03320	Bacterial fructose-1,6-bisphosphatase, glpX-encoded
YPO0090	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
YPO0090	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
YPO0091	PF00230	Major intrinsic protein
YPO0093	PF06005	Protein of unknown function (DUF904)
YPO0094	PF01797	Transposase IS200 like
YPO0096	PF01695	IstB-like ATP binding protein
YPO0097	PF00665	Integrase core domain
YPO0097	PF02796	Helix-turn-helix domain of resolvase
YPO0099	PF13437	HlyD family secretion protein
YPO0102	PF14016	YPO0102
YPO0103	PF03737	Demethylmenaquinone methyltransferase
YPO0104	PF01040	UbiA prenyltransferase family
YPO0105	PF00004	ATPase family associated with various cellular activities (AAA)
YPO0105	PF07724	AAA domain (Cdc48 subfamily)
YPO0105	PF10431	C-terminal, D2-small domain, of ClpB protein
YPO0106	PF00227	Proteasome subunit
YPO0107	PF05036	Sporulation related domain
YPO0108	PF00356	Bacterial regulatory proteins, lacI family
YPO0108	PF13377	Periplasmic binding protein-like domain
YPO0110	PF00270	DEAD/DEAH box helicase
YPO0110	PF00271	Helicase conserved C-terminal domain
YPO0111	PF01197	Ribosomal protein L31
YPO0112	PF05360	YPO0112
YPO0114	PF01340	Met Apo-repressor, MetJ
YPO0116	PF00696	Amino acid kinase family
YPO0116	PF00742	Homoserine dehydrogenase
YPO0116	PF03447	Homoserine dehydrogenase, NAD binding domain
YPO0117	PF02219	Methylenetetrahydrofolate reductase
YPO0118	PF00665	Integrase core domain
YPO0118	PF13276	YPO0118
YPO0119	PF13518	Helix-turn-helix domain
YPO0120	PF00455	YPO0120
YPO0120	PF08220	DeoR-like helix-turn-helix domain
YPO0121	PF01694	Rhomboid family
YPO0121	PF12122	Protein of unknown function (DUF3582)
YPO0122	PF00581	Rhodanese-like domain
YPO0123	PF00196	Bacterial regulatory proteins, luxR family
YPO0126	PF02446	4-alpha-glucanotransferase
YPO0127	PF01106	NifU-like domain
YPO0127	PF01521	Iron-sulphur cluster biosynthesis
YPO0128	PF00156	Phosphoribosyl transferase domain
YPO0129	PF00561	alpha/beta hydrolase fold
YPO0130	PF07338	Protein of unknown function (DUF1471)
YPO0131	PF09012	FeoC like transcriptional regulator
YPO0132	PF02421	Ferrous iron transport protein B
YPO0132	PF07664	YPO0132
YPO0132	PF07670	Nucleoside recognition
YPO0133	PF04023	FeoA domain
YPO0134	PF00575	S1 RNA binding domain
YPO0134	PF09371	Tex-like protein N-terminal domain
YPO0134	PF12836	Helix-hairpin-helix motif
YPO0134	PF16921	YPO0134
YPO0135	PF01272	Transcription elongation factor, GreA/GreB, C-term
YPO0135	PF03449	Transcription elongation factor, N-terminal
YPO0136	PF00072	Response regulator receiver domain
YPO0136	PF00486	Transcriptional regulatory protein, C terminal
YPO0137	PF00512	His Kinase A (phospho-acceptor) domain
YPO0137	PF00672	HAMP domain
YPO0137	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YPO0138	PF01293	Phosphoenolpyruvate carboxykinase
YPO0139	PF01430	Hsp33 protein
YPO0140	PF01479	S4 domain
YPO0141	PF13419	Haloacid dehalogenase-like hydrolase
YPO0142	PF07095	Intracellular growth attenuator protein IgaA
YPO0144	PF00293	NUDIX domain
YPO0145	PF00905	Penicillin binding protein transpeptidase domain
YPO0145	PF00912	Transglycosylase
YPO0145	PF17092	YPO0145
YPO0146	PF11104	Type IV pilus assembly protein PilM;
YPO0147	PF05137	YPO0147
YPO0149	PF10748	YPO0149
YPO0150	PF00263	YPO0150
YPO0150	PF03958	Bacterial type II/III secretion system short domain
YPO0151	PF01202	Shikimate kinase
YPO0152	PF01761	3-dehydroquinate synthase
YPO0153	PF05036	Sporulation related domain
YPO0154	PF02086	D12 class N6 adenine-specific DNA methyltransferase
YPO0155	PF00834	Ribulose-phosphate 3 epimerase family
YPO0156	PF13419	Haloacid dehalogenase-like hydrolase
YPO0157	PF00579	tRNA synthetases class I (W and Y)
YPO0158	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
YPO0158	PF10414	Sirohaem synthase dimerisation region
YPO0158	PF13241	Putative NAD(P)-binding
YPO0158	PF14824	Sirohaem biosynthesis protein central
YPO0159	PF01226	Formate/nitrite transporter
YPO0160	PF13806	Rieske-like [2Fe-2S] domain
YPO0161	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
YPO0161	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
YPO0161	PF04324	BFD-like [2Fe-2S] binding domain
YPO0161	PF07992	Pyridine nucleotide-disulphide oxidoreductase
YPO0162	PF07969	Amidohydrolase family
YPO0163	PF07690	Major Facilitator Superfamily
YPO0164	PF00593	TonB dependent receptor
YPO0164	PF07715	TonB-dependent Receptor Plug Domain
YPO0165	PF00356	Bacterial regulatory proteins, lacI family
YPO0165	PF13377	Periplasmic binding protein-like domain
YPO0166	PF02056	Family 4 glycosyl hydrolase
YPO0166	PF11975	Family 4 glycosyl hydrolase C-terminal domain
YPO0167	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
YPO0168	PF05872	YPO0168
YPO0169	PF00117	Glutamine amidotransferase class-I
YPO0171	PF00665	Integrase core domain
YPO0171	PF02796	Helix-turn-helix domain of resolvase
YPO0172	PF01695	IstB-like ATP binding protein
YPO0174	PF12805	YPO0174
YPO0174	PF13515	YPO0174
YPO0175	PF00027	Cyclic nucleotide-binding domain
YPO0175	PF00325	Bacterial regulatory proteins, crp family
YPO0176	PF02566	OsmC-like protein
YPO0177	PF06836	YPO0177
YPO0178	PF00485	Phosphoribulokinase / Uridine kinase family
YPO0179	PF06794	Uncharacterised protein family (UPF0270)
YPO0180	PF00561	alpha/beta hydrolase fold
YPO0181	PF01810	YPO0181
YPO0182	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
YPO0183	PF00005	ABC transporter
YPO0184	PF00528	Binding-protein-dependent transport system inner membrane component
YPO0185	PF02668	Taurine catabolism dioxygenase TauD, TfdA family
YPO0186	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
YPO0187	PF00535	Glycosyl transferase family 2
YPO0190	PF02525	Flavodoxin-like fold
YPO0191	PF00999	Sodium/hydrogen exchanger family
YPO0191	PF02254	TrkA-N domain
YPO0192	PF09526	YPO0192
YPO0193	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
YPO0194	PF04102	SlyX
YPO0195	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
YPO0195	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
YPO0196	PF08348	YPO0196
YPO0196	PF13309	YPO0196
YPO0197	PF02635	DsrE/DsrF-like family
YPO0198	PF02635	DsrE/DsrF-like family
YPO0199	PF04077	DsrH like protein
YPO0200	PF00164	Ribosomal protein S12/S23
YPO0201	PF00177	Ribosomal protein S7p/S5e
YPO0202	PF00009	Elongation factor Tu GTP binding domain
YPO0202	PF00679	Elongation factor G C-terminus
YPO0202	PF03144	Elongation factor Tu domain 2
YPO0202	PF03764	Elongation factor G, domain IV
YPO0202	PF14492	Elongation Factor G, domain II
YPO0203	PF00009	Elongation factor Tu GTP binding domain
YPO0203	PF03143	Elongation factor Tu C-terminal domain
YPO0203	PF03144	Elongation factor Tu domain 2
YPO0204	PF01797	Transposase IS200 like
YPO0205	PF04324	BFD-like [2Fe-2S] binding domain
YPO0206	PF00210	Ferritin-like domain
YPO0209	PF00338	Ribosomal protein S10p/S20e
YPO0210	PF00297	Ribosomal protein L3
YPO0211	PF00573	Ribosomal protein L4/L1 family
YPO0212	PF00276	Ribosomal protein L23
YPO0213	PF00181	Ribosomal Proteins L2, RNA binding domain
YPO0213	PF03947	Ribosomal Proteins L2, C-terminal domain
YPO0214	PF00203	Ribosomal protein S19
YPO0215	PF00237	Ribosomal protein L22p/L17e
YPO0216	PF00189	Ribosomal protein S3, C-terminal domain
YPO0216	PF07650	KH domain
YPO0217	PF00252	Ribosomal protein L16p/L10e
YPO0218	PF00831	Ribosomal L29 protein
YPO0219	PF00366	Ribosomal protein S17
YPO0220	PF00238	Ribosomal protein L14p/L23e
YPO0221	PF00467	KOW motif
YPO0221	PF17136	YPO0221
YPO0222	PF00281	Ribosomal protein L5
YPO0222	PF00673	ribosomal L5P family C-terminus
YPO0222a	PF00253	Ribosomal protein S14p/S29e
YPO0223	PF00410	Ribosomal protein S8
YPO0224	PF00347	Ribosomal protein L6
YPO0225	PF00861	Ribosomal L18p/L5e family
YPO0226	PF00333	Ribosomal protein S5, N-terminal domain
YPO0226	PF03719	Ribosomal protein S5, C-terminal domain
YPO0227	PF00327	Ribosomal protein L30p/L7e
YPO0228	PF00828	Ribosomal protein L18e/L15
YPO0229	PF00344	SecY translocase
YPO0230	PF00444	Ribosomal protein L36
YPO0231	PF00416	Ribosomal protein S13/S18
YPO0232	PF00411	Ribosomal protein S11
YPO0233	PF00163	Ribosomal protein S4/S9 N-terminal domain
YPO0233	PF01479	S4 domain
YPO0234	PF01000	RNA polymerase Rpb3/RpoA insert domain
YPO0234	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
YPO0234	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
YPO0235	PF01196	Ribosomal protein L17
YPO0236	PF13411	MerR HTH family regulatory protein
YPO0237	PF03889	YPO0237
YPO0238	PF01741	Large-conductance mechanosensitive channel, MscL
YPO0239	PF02080	TrkA-C domain
YPO0239	PF02254	TrkA-N domain
YPO0240	PF01029	NusB family
YPO0240	PF01189	NOL1/NOP2/sun family
YPO0241	PF00551	Formyl transferase
YPO0241	PF02911	Formyl transferase, C-terminal domain
YPO0242	PF01327	Polypeptide deformylase
YPO0243	PF02481	DNA recombination-mediator protein A
YPO0244	PF04361	YPO0244
YPO0245	PF01396	YPO0245
YPO0245a	PF01300	Telomere recombination
YPO0246	PF01488	Shikimate / quinate 5-dehydrogenase
YPO0246	PF08501	Shikimate dehydrogenase substrate binding domain
YPO0247	PF00132	Bacterial transferase hexapeptide (six repeats)
YPO0248	PF01695	IstB-like ATP binding protein
YPO0249	PF00665	Integrase core domain
YPO0249	PF02796	Helix-turn-helix domain of resolvase
YPO0250	PF12715	Abhydrolase family
YPO0251	PF00474	Sodium:solute symporter family
YPO0252	PF04341	YPO0252
YPO0253	PF00501	AMP-binding enzyme
YPO0253	PF13193	AMP-binding enzyme C-terminal domain
YPO0253	PF16177	YPO0253
YPO0254	PF00375	Sodium:dicarboxylate symporter family
YPO0255	PF00072	Response regulator receiver domain
YPO0255	PF00196	Bacterial regulatory proteins, luxR family
YPO0256	PF00072	Response regulator receiver domain
YPO0256	PF00512	His Kinase A (phospho-acceptor) domain
YPO0256	PF01627	Hpt domain
YPO0256	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YPO0257	PF00263	YPO0257
YPO0257	PF03958	Bacterial type II/III secretion system short domain
YPO0258	PF16693	YPO0258
YPO0259	PF08988	Protein of unknown function (DUF1895)
YPO0260a	PF09392	Type III secretion needle MxiH like
YPO0261	PF06287	YPO0261
YPO0263	PF01514	Secretory protein of YscJ/FliF family
YPO0264	PF13327	YPO0264
YPO0265	PF06188	YPO0265
YPO0266	PF00771	FHIPEP family
YPO0267	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
YPO0267	PF02874	ATP synthase alpha/beta family, beta-barrel domain
YPO0269	PF01052	Surface presentation of antigens (SPOA)
YPO0270	PF00813	YPO0270
YPO0271	PF01313	YPO0271
YPO0272	PF01311	YPO0272
YPO0273	PF01312	FlhB HrpN YscU SpaS Family
YPO0274	PF04143	YPO0274
YPO0275	PF01206	Sulfurtransferase TusA
YPO0276	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
YPO0276	PF03466	LysR substrate binding domain
YPO0278	PF01053	Cys/Met metabolism PLP-dependent enzyme
YPO0279	PF00005	ABC transporter
YPO0280	PF01032	FecCD transport family
YPO0281	PF01497	Periplasmic binding protein
YPO0282	PF05171	Haemin-degrading HemS
YPO0283	PF00593	TonB dependent receptor
YPO0283	PF07715	TonB-dependent Receptor Plug Domain
YPO0284	PF13460	NADH(P)-binding
YPO0285	PF06228	Haem utilisation ChuX/HutX
YPO0286	PF04055	Radical SAM superfamily
YPO0287	PF02219	Methylenetetrahydrofolate reductase
YPO0289	PF15617	YPO0289
YPO0290	PF11202	YPO0290
YPO0290	PF15608	YPO0290
YPO0292	PF12500	YPO0292
YPO0292	PF15609	YPO0292
YPO0293	PF15632	YPO0293
YPO0294	PF02342	TerD domain
YPO0295	PF02342	TerD domain
YPO0296	PF05099	Tellurite resistance protein TerB
YPO0297	PF03741	YPO0297
YPO0298	PF02342	TerD domain
YPO0299	PF02342	TerD domain
YPO0300	PF01797	Transposase IS200 like
YPO0301	PF06551	YPO0301
YPO0302	PF00577	Outer membrane usher protein
YPO0302	PF13953	PapC C-terminal domain
YPO0302	PF13954	PapC N-terminal domain
YPO0303	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
YPO0308	PF01565	FAD binding domain
YPO0308	PF08031	Berberine and berberine like
YPO0309	PF03797	Autotransporter beta-domain
YPO0310	PF04345	Chorismate lyase
YPO0311	PF01040	UbiA prenyltransferase family
YPO0312	PF01553	Acyltransferase
YPO0313	PF01219	Prokaryotic diacylglycerol kinase
YPO0314	PF00717	Peptidase S24-like
YPO0314	PF01726	LexA DNA binding domain
YPO0315	PF01475	Ferric uptake regulator family
YPO0316	PF01207	Dihydrouridine synthase (Dus)
YPO0318	PF09583	YPO0318
YPO0319	PF00107	Zinc-binding dehydrogenase
YPO0319	PF08240	Alcohol dehydrogenase GroES-like domain
YPO0320	PF00772	DnaB-like helicase N terminal domain
YPO0320	PF03796	DnaB-like helicase C terminal domain
YPO0321	PF00842	Alanine racemase, C-terminal domain
YPO0321	PF01168	Alanine racemase, N-terminal domain
YPO0322	PF00155	Aminotransferase class I and II
YPO0323	PF04237	YjbR
YPO0324	PF00005	ABC transporter
YPO0325	PF00436	Single-strand binding protein family
YPO0326	PF05336	Domain of unknown function (DUF718)
YPO0327	PF00465	Iron-containing alcohol dehydrogenase
YPO0328	PF00596	Class II Aldolase and Adducin N-terminal domain
YPO0329	PF06134	L-rhamnose isomerase (RhaA)
YPO0330	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
YPO0330	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
YPO0332	PF02311	AraC-like ligand binding domain
YPO0332	PF12833	Helix-turn-helix domain
YPO0333	PF02311	AraC-like ligand binding domain
YPO0333	PF12833	Helix-turn-helix domain
YPO0334	PF06379	YPO0334
YPO0339	PF03272	YPO0339
YPO0339	PF13402	Peptidase M60-like family
YPO0341	PF00440	Bacterial regulatory proteins, tetR family
YPO0342	PF07992	Pyridine nucleotide-disulphide oxidoreductase
YPO0342	PF13247	4Fe-4S dicluster domain
YPO0342	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
YPO0343	PF12800	4Fe-4S binding domain
YPO0343	PF13187	4Fe-4S dicluster domain
YPO0344	PF00384	Molybdopterin oxidoreductase
YPO0344	PF01568	Molydopterin dinucleotide binding domain
YPO0344	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
YPO0345	PF02683	YPO0345
YPO0345	PF11412	Disulphide bond corrector protein DsbC
YPO0345	PF13899	Thioredoxin-like
YPO0346	PF03091	CutA1 divalent ion tolerance protein
YPO0347	PF03605	YPO0347
YPO0348	PF00206	Lyase
YPO0348	PF10415	Fumarase C C-terminus
YPO0349	PF04186	YPO0349
YPO0350	PF00166	Chaperonin 10 Kd subunit
YPO0351	PF00118	TCP-1/cpn60 chaperonin family
YPO0352	PF13698	YPO0352
YPO0353	PF04055	Radical SAM superfamily
YPO0353	PF13353	4Fe-4S single cluster domain
YPO0354	PF01132	Elongation factor P (EF-P) OB domain
YPO0354	PF08207	Elongation factor P (EF-P) KOW-like domain
YPO0354	PF09285	Elongation factor P, C-terminal
YPO0355	PF00893	Small Multidrug Resistance protein
YPO0356	PF01797	Transposase IS200 like
YPO0357	PF02313	Fumarate reductase subunit D
YPO0358	PF02300	Fumarate reductase subunit C
YPO0359	PF13085	2Fe-2S iron-sulfur cluster binding domain
YPO0359	PF13183	4Fe-4S dicluster domain
YPO0360	PF00890	FAD binding domain
YPO0360	PF02910	Fumarate reductase flavoprotein C-term
YPO0362	PF00152	tRNA synthetases class II (D, K and N)
YPO0363	PF00924	Mechanosensitive ion channel
YPO0363	PF12794	YPO0363
YPO0363	PF12795	YPO0363
YPO0364	PF02666	YPO0364
YPO0365	PF03193	Protein of unknown function, DUF258
YPO0366	PF00929	Exonuclease
YPO0367	PF08331	YPO0367
YPO0367	PF13484	YPO0367
YPO0368	PF01256	Carbohydrate kinase
YPO0368	PF03853	YjeF-related protein N-terminus
YPO0369	PF02367	Uncharacterised P-loop hydrolase UPF0079
YPO0370	PF01476	LysM domain
YPO0370	PF01520	N-acetylmuramoyl-L-alanine amidase
YPO0370	PF11741	AMIN domain
YPO0371	PF01119	DNA mismatch repair protein, C-terminal domain
YPO0371	PF08676	MutL C terminal dimerisation domain
YPO0371	PF13589	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YPO0372	PF01715	IPP transferase
YPO0374	PF01926	50S ribosome-binding GTPase
YPO0374	PF13167	YPO0374
YPO0374	PF16360	YPO0374
YPO0375	PF01145	SPFH domain / Band 7 family
YPO0375	PF12221	YPO0375
YPO0376	PF01145	SPFH domain / Band 7 family
YPO0377	PF09838	YPO0377
YPO0378	PF00709	Adenylosuccinate synthetase
YPO0379	PF02082	Transcriptional regulator
YPO0380	PF00575	S1 RNA binding domain
YPO0380	PF00773	RNB domain
YPO0380	PF08206	Ribonuclease B OB domain
YPO0380	PF08461	Ribonuclease R winged-helix domain
YPO0381	PF00588	SpoU rRNA Methylase family
YPO0381	PF08032	RNA 2'-O ribose methyltransferase substrate binding
YPO0383	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
YPO0383	PF02770	Acyl-CoA dehydrogenase, middle domain
YPO0384	PF07338	Protein of unknown function (DUF1471)
YPO0385	PF01695	IstB-like ATP binding protein
YPO0386	PF00665	Integrase core domain
YPO0386	PF02796	Helix-turn-helix domain of resolvase
YPO0387	PF07728	AAA domain (dynein-related subfamily)
YPO0388	PF10117	YPO0388
YPO0391	PF01555	DNA methylase
YPO0392	PF13589	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YPO0392a	PF01527	Transposase
YPO0396	PF13558	Putative exonuclease SbcCD, C subunit
YPO0397	PF09983	YPO0397
YPO0397	PF11795	YPO0397
YPO0398	PF01435	Peptidase family M48
YPO0399	PF05987	YPO0399
YPO0401	PF12833	Helix-turn-helix domain
YPO0402	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
YPO0403	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
YPO0404	PF02378	Phosphotransferase system, EIIC
YPO0405	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
YPO0405	PF00381	PTS HPr component phosphorylation site
YPO0405	PF00391	PEP-utilising enzyme, mobile domain
YPO0405	PF02896	PEP-utilising enzyme, TIM barrel domain
YPO0405	PF05524	PEP-utilising enzyme, N-terminal
YPO0406	PF10696	YPO0406
YPO0407	PF03992	Antibiotic biosynthesis monooxygenase
YPO0408	PF01791	DeoC/LacD family aldolase
YPO0409	PF13407	Periplasmic binding protein domain
YPO0410	PF02653	YPO0410
YPO0411	PF02653	YPO0411
YPO0412	PF00005	ABC transporter
YPO0415	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
YPO0415	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
YPO0416	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
YPO0417	PF04932	YPO0417
YPO0419	PF06305	YPO0419
YPO0420	PF16576	YPO0420
YPO0421	PF00873	AcrB/AcrD/AcrF family
YPO0424	PF01095	Pectinesterase
YPO0425	PF00990	GGDEF domain
YPO0426	PF07256	YPO0426
YPO0427	PF05175	Methyltransferase small domain
YPO0427	PF08468	Methyltransferase small domain N-terminal
YPO0428	PF03603	DNA polymerase III psi subunit
YPO0429	PF00583	Acetyltransferase (GNAT) family
YPO0430	PF00009	Elongation factor Tu GTP binding domain
YPO0430	PF03144	Elongation factor Tu domain 2
YPO0430	PF16658	YPO0430
YPO0431	PF04972	BON domain
YPO0432	PF07043	YPO0432
YPO0433	PF01734	Patatin-like phospholipase
YPO0434	PF01026	TatD related DNase
YPO0435	PF01773	Na+ dependent nucleoside transporter N-terminus
YPO0435	PF07662	Na+ dependent nucleoside transporter C-terminus
YPO0435	PF07670	Nucleoside recognition
YPO0436	PF01791	DeoC/LacD family aldolase
YPO0439	PF01676	Metalloenzyme superfamily
YPO0440	PF01048	Phosphorylase superfamily
YPO0441	PF10144	YPO0441
YPO0442	PF12710	haloacid dehalogenase-like hydrolase
YPO0443	PF13481	AAA domain
YPO0443	PF13541	Subunit ChlI of Mg-chelatase
YPO0444	PF01381	Helix-turn-helix
YPO0444	PF13521	AAA domain
YPO0445	PF02661	Fic/DOC family
YPO0445	PF13776	YPO0445
YPO0448	PF00691	OmpA family
YPO0449	PF00990	GGDEF domain
YPO0449	PF17152	YPO0449
YPO0450	PF13689	YPO0450
YPO0451	PF00122	E1-E2 ATPase
YPO0451	PF00689	Cation transporting ATPase, C-terminus
YPO0451	PF00690	Cation transporter/ATPase, N-terminus
YPO0451	PF00702	haloacid dehalogenase-like hydrolase
YPO0452	PF01464	Transglycosylase SLT domain
YPO0452	PF14718	Soluble lytic murein transglycosylase L domain
YPO0453	PF01371	Trp repressor protein
YPO0454	PF01931	Protein of unknown function DUF84
YPO0455	PF00300	Histidine phosphatase superfamily (branch 1)
YPO0456	PF06445	GyrI-like small molecule binding domain
YPO0456	PF12833	Helix-turn-helix domain
YPO0457	PF05981	YPO0457
YPO0458	PF00072	Response regulator receiver domain
YPO0458	PF00486	Transcriptional regulatory protein, C terminal
YPO0459	PF00696	Amino acid kinase family
YPO0459	PF00742	Homoserine dehydrogenase
YPO0459	PF01842	ACT domain
YPO0459	PF03447	Homoserine dehydrogenase, NAD binding domain
YPO0459	PF13840	ACT domain
YPO0460	PF00288	GHMP kinases N terminal domain
YPO0460	PF08544	GHMP kinases C terminal
YPO0461	PF00291	Pyridoxal-phosphate dependent enzyme
YPO0461	PF14821	Threonine synthase N terminus
YPO0462	PF03883	YPO0462
YPO0463	PF00923	Transaldolase
YPO0464	PF00994	Probable molybdopterin binding domain
YPO0465	PF07690	Major Facilitator Superfamily
YPO0467	PF01184	YPO0467
YPO0468	PF00012	Hsp70 protein
YPO0469	PF00226	DnaJ domain
YPO0469	PF00684	DnaJ central domain
YPO0469	PF01556	DnaJ C terminal domain
YPO0470	PF06965	Na+/H+ antiporter 1
YPO0471	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
YPO0471	PF03466	LysR substrate binding domain
YPO0472	PF01649	Ribosomal protein S20
YPO0474	PF01687	Riboflavin kinase
YPO0474	PF06574	FAD synthetase
YPO0475	PF00133	tRNA synthetases class I (I, L, M and V)
YPO0475	PF06827	Zinc finger found in FPG and IleRS
YPO0475	PF08264	Anticodon-binding domain of tRNA
YPO0476	PF01252	YPO0476
YPO0476a	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
YPO0477	PF02401	LytB protein
YPO0479	PF01797	Transposase IS200 like
YPO0480	PF01113	Dihydrodipicolinate reductase, N-terminus
YPO0480	PF05173	Dihydrodipicolinate reductase, C-terminus
YPO0481	PF00117	Glutamine amidotransferase class-I
YPO0481	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
YPO0482	PF02142	MGS-like domain
YPO0482	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
YPO0482	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
YPO0483	PF01810	YPO0483
YPO0484	PF06738	YPO0484
YPO0485	PF12821	YPO0485
YPO0486	PF00186	Dihydrofolate reductase
YPO0487	PF01797	Transposase IS200 like
YPO0489	PF12582	YPO0489
YPO0490	PF00149	Calcineurin-like phosphoesterase
YPO0491	PF04379	Protein of unknown function (DUF525)
YPO0492	PF00398	Ribosomal RNA adenine dimethylase
YPO0493	PF04166	Pyridoxal phosphate biosynthetic protein PdxA
YPO0494	PF00639	PPIC-type PPIASE domain
YPO0494	PF09312	SurA N-terminal domain
YPO0495	PF03968	OstA-like protein
YPO0495	PF04453	Organic solvent tolerance protein
YPO0496	PF00226	DnaJ domain
YPO0496	PF05099	Tellurite resistance protein TerB
YPO0497	PF00849	RNA pseudouridylate synthase
YPO0498	PF10074	YPO0498
YPO0499	PF06812	YPO0499
YPO0500	PF05591	YPO0500
YPO0501	PF05943	YPO0501
YPO0502	PF05638	Protein of unknown function (DUF796)
YPO0503	PF04965	Gene 25-like lysozyme
YPO0504	PF05947	YPO0504
YPO0505	PF06996	YPO0505
YPO0506	PF00004	ATPase family associated with various cellular activities (AAA)
YPO0506	PF02861	Clp amino terminal domain
YPO0506	PF07724	AAA domain (Cdc48 subfamily)
YPO0507	PF05954	Phage late control gene D protein (GPD)
YPO0510	PF00805	Pentapeptide repeats (8 copies)
YPO0510	PF13599	Pentapeptide repeats (9 copies)
YPO0511	PF12059	YPO0511
YPO0511a	PF13665	YPO0511a
YPO0512	PF12790	Type VI secretion lipoprotein
YPO0513	PF05936	YPO0513
YPO0514	PF00691	OmpA family
YPO0514	PF09850	Uncharacterized protein conserved in bacteria (DUF2077)
YPO0515	PF06744	YPO0515
YPO0515	PF06761	YPO0515
YPO0515	PF14331	YPO0515
YPO0517	PF00176	SNF2 family N-terminal domain
YPO0517	PF00271	Helicase conserved C-terminal domain
YPO0517	PF12137	RNA polymerase recycling family C-terminal
YPO0518	PF00136	DNA polymerase family B
YPO0518	PF03104	DNA polymerase family B, exonuclease domain
YPO0519	PF09335	YPO0519
YPO0520	PF00005	ABC transporter
YPO0521	PF00528	Binding-protein-dependent transport system inner membrane component
YPO0522	PF13343	Bacterial extracellular solute-binding protein
YPO0524	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
YPO0524	PF12793	YPO0524
YPO0527	PF01695	IstB-like ATP binding protein
YPO0528	PF00665	Integrase core domain
YPO0528	PF02796	Helix-turn-helix domain of resolvase
YPO0530	PF00694	Aconitase C-terminal domain
YPO0531	PF00330	Aconitase family (aconitate hydratase)
YPO0532	PF00180	Isocitrate/isopropylmalate dehydrogenase
YPO0533	PF00682	HMGL-like
YPO0533	PF08502	LeuA allosteric (dimerisation) domain
YPO0534	PF01797	Transposase IS200 like
YPO0535	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
YPO0535	PF03466	LysR substrate binding domain
YPO0537	PF00501	AMP-binding enzyme
YPO0539	PF00205	Thiamine pyrophosphate enzyme, central domain
YPO0539	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
YPO0539	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
YPO0540	PF01842	ACT domain
YPO0540	PF10369	Small subunit of acetolactate synthase
YPO0541	PF01797	Transposase IS200 like
YPO0543	PF00356	Bacterial regulatory proteins, lacI family
YPO0543	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
YPO0544	PF06610	YPO0544
YPO0546	PF02381	MraZ protein
YPO0547	PF01795	MraW methylase family
YPO0548	PF04999	YPO0548
YPO0549	PF00905	Penicillin binding protein transpeptidase domain
YPO0549	PF03717	Penicillin-binding Protein dimerisation domain
YPO0550	PF01225	Mur ligase family, catalytic domain
YPO0550	PF02875	Mur ligase family, glutamate ligase domain
YPO0550	PF08245	Mur ligase middle domain
YPO0551	PF01225	Mur ligase family, catalytic domain
YPO0551	PF02875	Mur ligase family, glutamate ligase domain
YPO0551	PF08245	Mur ligase middle domain
YPO0552	PF00953	Glycosyl transferase family 4
YPO0552	PF10555	Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1
YPO0553	PF02875	Mur ligase family, glutamate ligase domain
YPO0553	PF08245	Mur ligase middle domain
YPO0554	PF01098	YPO0554
YPO0555	PF03033	Glycosyltransferase family 28 N-terminal domain
YPO0555	PF04101	Glycosyltransferase family 28 C-terminal domain
YPO0556	PF01225	Mur ligase family, catalytic domain
YPO0556	PF02875	Mur ligase family, glutamate ligase domain
YPO0556	PF08245	Mur ligase middle domain
YPO0557	PF01820	D-ala D-ala ligase N-terminus
YPO0557	PF07478	D-ala D-ala ligase C-terminus
YPO0558	PF03799	Cell division protein FtsQ
YPO0558	PF08478	POTRA domain, FtsQ-type
YPO0559	PF02491	SHS2 domain inserted in FTSA
YPO0559	PF14450	Cell division protein FtsA
YPO0560	PF00091	Tubulin/FtsZ family, GTPase domain
YPO0560	PF12327	FtsZ family, C-terminal domain
YPO0561	PF03331	UDP-3-O-acyl N-acetylglycosamine deacetylase
YPO0562	PF05258	YPO0562
YPO0563	PF06558	YPO0563
YPO0564	PF01043	SecA preprotein cross-linking domain
YPO0564	PF02810	SEC-C motif
YPO0564	PF07516	SecA Wing and Scaffold domain
YPO0564	PF07517	SecA DEAD-like domain
YPO0565	PF00293	NUDIX domain
YPO0566	PF01695	IstB-like ATP binding protein
YPO0567	PF00665	Integrase core domain
YPO0567	PF02796	Helix-turn-helix domain of resolvase
YPO0568	PF07681	YPO0568
YPO0569	PF13997	YPO0569
YPO0569a	PF07332	YPO0569a
YPO0570	PF05957	YPO0570
YPO0572	PF06476	YPO0572
YPO0573	PF13721	SecD export protein N-terminal TM region
YPO0574	PF09335	YPO0574
YPO0576	PF00392	Bacterial regulatory proteins, gntR family
YPO0576	PF07729	FCD domain
YPO0577	PF07690	Major Facilitator Superfamily
YPO0579	PF02614	Glucuronate isomerase
YPO0580	PF01232	Mannitol dehydrogenase Rossmann domain
YPO0580	PF08125	Mannitol dehydrogenase C-terminal domain
YPO0581	PF04295	YPO0581
YPO0581	PF08666	SAF domain
YPO0582	PF10688	YPO0582
YPO0583	PF01797	Transposase IS200 like
YPO0584	PF00375	Sodium:dicarboxylate symporter family
YPO0585	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
YPO0586	PF01863	Protein of unknown function DUF45
YPO0587	PF03212	Pertactin
YPO0587	PF03797	Autotransporter beta-domain
YPO0588	PF05175	Methyltransferase small domain
YPO0589	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
YPO0589	PF07992	Pyridine nucleotide-disulphide oxidoreductase
YPO0590	PF03729	YPO0590
YPO0592	PF00069	Protein kinase domain
YPO0593	PF13672	Protein phosphatase 2C
YPO0594	PF00092	von Willebrand factor type A domain
YPO0594	PF15616	YPO0594
YPO0595	PF00092	von Willebrand factor type A domain
YPO0596	PF02342	TerD domain
YPO0597	PF00092	von Willebrand factor type A domain
YPO0598	PF03865	Haemolysin secretion/activation protein ShlB/FhaC/HecB
YPO0598	PF08479	POTRA domain, ShlB-type
YPO0599	PF04829	YPO0599
YPO0599	PF05860	haemagglutination activity domain
YPO0599	PF13018	YPO0599
YPO0599	PF13332	YPO0599
YPO0602	PF15599	YPO0602
YPO0606	PF03797	Autotransporter beta-domain
YPO0607	PF13557	YPO0607
YPO0608	PF10091	Putative glucoamylase
YPO0609	PF00005	ABC transporter
YPO0609	PF08402	TOBE domain
YPO0611	PF00356	Bacterial regulatory proteins, lacI family
YPO0611	PF13377	Periplasmic binding protein-like domain
YPO0612	PF01547	Bacterial extracellular solute-binding protein
YPO0613	PF00528	Binding-protein-dependent transport system inner membrane component
YPO0614	PF00528	Binding-protein-dependent transport system inner membrane component
YPO0616	PF00933	Glycosyl hydrolase family 3 N terminal domain
YPO0616	PF01915	Glycosyl hydrolase family 3 C-terminal domain
YPO0616	PF14310	Fibronectin type III-like domain
YPO0617	PF02321	Outer membrane efflux protein
YPO0618	PF04632	YPO0618
YPO0619	PF13437	HlyD family secretion protein
YPO0619	PF13533	Biotin-lipoyl like
YPO0620	PF17090	YPO0620
YPO0623	PF00155	Aminotransferase class I and II
YPO0624	PF03553	YPO0624
YPO0625	PF10604	Polyketide cyclase / dehydrase and lipid transport
YPO0626	PF08348	YPO0626
YPO0626	PF13309	YPO0626
YPO0627	PF01042	Endoribonuclease L-PSP
YPO0628	PF01042	Endoribonuclease L-PSP
YPO0629	PF08803	Putative mono-oxygenase ydhR
YPO0631	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
YPO0631	PF03466	LysR substrate binding domain
YPO0637	PF00665	Integrase core domain
YPO0637	PF02796	Helix-turn-helix domain of resolvase
YPO0638	PF01695	IstB-like ATP binding protein
YPO0643	PF00140	Sigma-70 factor, region 1
YPO0643	PF03979	Sigma-70 factor, region 1
YPO0643	PF04539	Sigma-70 region 3
YPO0643	PF04542	Sigma-70 region 2
YPO0643	PF04545	Sigma-70, region 4
YPO0643	PF04546	Sigma-70, non-essential region
YPO0644	PF01807	CHC2 zinc finger
YPO0644	PF08275	DNA primase catalytic core, N-terminal domain
YPO0644	PF08278	DNA primase DnaG DnaB-binding
YPO0644	PF10410	DnaB-helicase binding domain of primase
YPO0644	PF13155	Toprim-like
YPO0645	PF01165	Ribosomal protein S21
YPO0646	PF00814	Glycoprotease family
YPO0647	PF02660	YPO0647
YPO0648	PF02152	Dihydroneopterin aldolase
YPO0649	PF02673	YPO0649
YPO0650	PF01743	Poly A polymerase head domain
YPO0650	PF01966	HD domain
YPO0650	PF12627	Probable RNA and SrmB- binding site of polymerase A
YPO0651	PF08239	Bacterial SH3 domain
YPO0652	PF01928	CYTH domain
YPO0653	PF03710	Glutamate-ammonia ligase adenylyltransferase
YPO0653	PF08335	GlnD PII-uridylyltransferase
YPO0654	PF00294	pfkB family carbohydrate kinase
YPO0654	PF01467	Cytidylyltransferase
YPO0655	PF13520	Amino acid permease
YPO0656	PF04380	YPO0656
YPO0658	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
YPO0659	PF02900	Catalytic LigB subunit of aromatic ring-opening dioxygenase
YPO0660	PF03738	Glutathionylspermidine synthase preATP-grasp
YPO0661	PF06693	YPO0661
YPO0663	PF02321	Outer membrane efflux protein
YPO0664	PF00293	NUDIX domain
YPO0665	PF06853	YPO0665
YPO0666	PF00149	Calcineurin-like phosphoesterase
YPO0667	PF05728	Uncharacterised protein family (UPF0227)
YPO0668	PF00204	DNA gyrase B
YPO0668	PF00986	DNA gyrase B subunit, carboxyl terminus
YPO0668	PF01751	Toprim domain
YPO0668	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YPO0669	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
YPO0669	PF03466	LysR substrate binding domain
YPO0670	PF02525	Flavodoxin-like fold
YPO0671	PF00521	DNA gyrase/topoisomerase IV, subunit A
YPO0671	PF03989	DNA gyrase C-terminal domain, beta-propeller
YPO0672	PF01553	Acyltransferase
YPO0673	PF07731	Multicopper oxidase
YPO0673	PF07732	Multicopper oxidase
YPO0676	PF00248	Aldo/keto reductase family
YPO0678	PF00465	Iron-containing alcohol dehydrogenase
YPO0679	PF06719	YPO0679
YPO0679	PF12833	Helix-turn-helix domain
YPO0680	PF09335	YPO0680
YPO0681	PF01053	Cys/Met metabolism PLP-dependent enzyme
YPO0682	PF01618	YPO0682
YPO0683	PF02472	Biopolymer transport protein ExbD/TolR
YPO0685	PF16964	YPO0685
YPO0686	PF07811	YPO0686
YPO0688	PF00482	Type II secretion system (T2SS), protein F
YPO0689	PF00482	Type II secretion system (T2SS), protein F
YPO0690	PF00437	Type II/IV secretion system protein
YPO0695	PF01478	Type IV leader peptidase family
YPO0696	PF01797	Transposase IS200 like
YPO0697	PF01797	Transposase IS200 like
YPO0698	PF00577	Outer membrane usher protein
YPO0698	PF13953	PapC C-terminal domain
YPO0698	PF13954	PapC N-terminal domain
YPO0699	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
YPO0699	PF02753	Pili assembly chaperone PapD, C-terminal domain
YPO0700	PF00419	Fimbrial protein
YPO0701	PF01497	Periplasmic binding protein
YPO0703	PF11153	YPO0703
YPO0706	PF01312	FlhB HrpN YscU SpaS Family
YPO0707	PF01311	YPO0707
YPO0708	PF01313	YPO0708
YPO0709	PF00813	YPO0709
YPO0710	PF01052	Surface presentation of antigens (SPOA)
YPO0711	PF01052	Surface presentation of antigens (SPOA)
YPO0712	PF00158	Sigma-54 interaction domain
YPO0712	PF02954	Bacterial regulatory protein, Fis family
YPO0713	PF02049	YPO0713
YPO0714	PF01514	Secretory protein of YscJ/FliF family
YPO0714	PF08345	YPO0714
YPO0715	PF01706	FliG C-terminal domain
YPO0715	PF14841	FliG middle domain
YPO0715	PF14842	FliG N-terminal domain
YPO0716	PF02108	YPO0716
YPO0716	PF09811	YPO0716
YPO0717	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
YPO0718	PF02050	Flagellar FliJ protein
YPO0719	PF05130	FlgN protein
YPO0720	PF04316	Anti-sigma-28 factor, FlgM
YPO0721	PF13144	SAF-like
YPO0722	PF00460	Flagella basal body rod protein
YPO0723	PF00460	Flagella basal body rod protein
YPO0723	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
YPO0724	PF03963	YPO0724
YPO0724	PF13860	FlgD Ig-like domain
YPO0724	PF13861	FlgD Tudor-like domain
YPO0725	PF00460	Flagella basal body rod protein
YPO0725	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
YPO0725	PF07559	Flagellar basal body protein FlaE
YPO0726	PF01797	Transposase IS200 like
YPO0728	PF00460	Flagella basal body rod protein
YPO0728	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
YPO0729	PF02107	YPO0729
YPO0730	PF02119	YPO0730
YPO0731	PF10135	YPO0731
YPO0732	PF00460	Flagella basal body rod protein
YPO0732	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
YPO0733	PF00669	Bacterial flagellin N-terminal helical region
YPO0736	PF00486	Transcriptional regulatory protein, C terminal
YPO0737	PF00669	Bacterial flagellin N-terminal helical region
YPO0737	PF00700	Bacterial flagellin C-terminal helical region
YPO0738	PF00669	Bacterial flagellin N-terminal helical region
YPO0738	PF00700	Bacterial flagellin C-terminal helical region
YPO0739	PF00669	Bacterial flagellin N-terminal helical region
YPO0739	PF00700	Bacterial flagellin C-terminal helical region
YPO0740	PF02465	YPO0740
YPO0740	PF07195	YPO0740
YPO0740	PF07196	Flagellin hook IN motif
YPO0741	PF02561	Flagellar protein FliS
YPO0743	PF02120	Flagellar hook-length control protein FliK
YPO0744	PF03748	YPO0744
YPO0745	PF04539	Sigma-70 region 3
YPO0745	PF04542	Sigma-70 region 2
YPO0745	PF04545	Sigma-70, region 4
YPO0746	PF01618	YPO0746
YPO0747	PF00691	OmpA family
YPO0747	PF13677	YPO0747
YPO0751	PF05656	YPO0751
YPO0754	PF10840	YPO0754
YPO0755	PF13518	Helix-turn-helix domain
YPO0756	PF00665	Integrase core domain
YPO0756	PF13276	YPO0756
YPO0757	PF00150	Cellulase (glycosyl hydrolase family 5)
YPO0758	PF00356	Bacterial regulatory proteins, lacI family
YPO0758	PF13377	Periplasmic binding protein-like domain
YPO0759	PF00939	Sodium:sulfate symporter transmembrane region
YPO0762	PF03527	YPO0762
YPO0762	PF05593	YPO0762
YPO0764	PF05954	Phage late control gene D protein (GPD)
YPO0764	PF06715	Gp5 C-terminal repeat (3 copies)
YPO0767	PF02447	YPO0767
YPO0770	PF00005	ABC transporter
YPO0770	PF00664	ABC transporter transmembrane region
YPO0771	PF00005	ABC transporter
YPO0771	PF00664	ABC transporter transmembrane region
YPO0772	PF07690	Major Facilitator Superfamily
YPO0773	PF00975	Thioesterase domain
YPO0774	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
YPO0775	PF01370	NAD dependent epimerase/dehydratase family
YPO0776	PF00501	AMP-binding enzyme
YPO0776	PF00550	Phosphopantetheine attachment site
YPO0776	PF00668	Condensation domain
YPO0776	PF00975	Thioesterase domain
YPO0776	PF08242	Methyltransferase domain
YPO0776	PF08415	YPO0776
YPO0777	PF00501	AMP-binding enzyme
YPO0777	PF00550	Phosphopantetheine attachment site
YPO0778	PF00501	AMP-binding enzyme
YPO0778	PF00550	Phosphopantetheine attachment site
YPO0778	PF00668	Condensation domain
YPO0778	PF08415	YPO0778
YPO0779	PF01695	IstB-like ATP binding protein
YPO0780	PF00665	Integrase core domain
YPO0780	PF02796	Helix-turn-helix domain of resolvase
YPO0783	PF00303	Thymidylate synthase
YPO0784	PF01790	YPO0784
YPO0785	PF00391	PEP-utilising enzyme, mobile domain
YPO0785	PF01590	GAF domain
YPO0785	PF02896	PEP-utilising enzyme, TIM barrel domain
YPO0785	PF05524	PEP-utilising enzyme, N-terminal
YPO0786	PF00293	NUDIX domain
YPO0789	PF02976	DNA mismatch repair enzyme MutH
YPO0790	PF00248	Aldo/keto reductase family
YPO0792	PF07690	Major Facilitator Superfamily
YPO0793	PF00501	AMP-binding enzyme
YPO0793	PF01553	Acyltransferase
YPO0794	PF00384	Molybdopterin oxidoreductase
YPO0794	PF01568	Molydopterin dinucleotide binding domain
YPO0795	PF00356	Bacterial regulatory proteins, lacI family
YPO0795	PF13377	Periplasmic binding protein-like domain
YPO0796	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
YPO0796	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
YPO0797	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
YPO0797	PF03466	LysR substrate binding domain
YPO0798	PF07690	Major Facilitator Superfamily
YPO0799	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
YPO0799	PF03466	LysR substrate binding domain
YPO0800	PF00753	Metallo-beta-lactamase superfamily
YPO0801	PF01323	DSBA-like thioredoxin domain
YPO0802	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
YPO0802	PF00672	HAMP domain
YPO0802	PF02203	Tar ligand binding domain homologue
YPO0804	PF00486	Transcriptional regulatory protein, C terminal
YPO0805	PF09691	Bacterial chaperone lipoprotein (PulS_OutS)
YPO0806	PF01478	Type IV leader peptidase family
YPO0806	PF06750	YPO0806
YPO0808	PF05134	Type II secretion system (T2SS), protein L
YPO0808	PF12693	GspL periplasmic domain
YPO0809	PF03934	Type II secretion system (T2SS), protein K
YPO0810	PF11612	Type II secretion system (T2SS), protein J
YPO0810	PF13633	Prokaryotic N-terminal methylation site
YPO0811	PF02501	Type II secretion system (T2SS), protein I
YPO0813	PF08334	Type II secretion system (T2SS), protein G
YPO0813	PF13544	YPO0813
YPO0814	PF00482	Type II secretion system (T2SS), protein F
YPO0815	PF00437	Type II/IV secretion system protein
YPO0816	PF00263	YPO0816
YPO0816	PF03958	Bacterial type II/III secretion system short domain
YPO0817	PF11356	Type IV pilus biogenesis
YPO0819	PF00484	Carbonic anhydrase
YPO0822	PF16946	YPO0822
YPO0823	PF03797	Autotransporter beta-domain
YPO0824	PF02278	Polysaccharide lyase family 8, super-sandwich domain
YPO0824	PF02884	Polysaccharide lyase family 8, C-terminal beta-sandwich domain
YPO0824	PF09092	Lyase, N terminal
YPO0824	PF09093	Lyase, catalytic
YPO0825	PF01695	IstB-like ATP binding protein
YPO0826	PF00665	Integrase core domain
YPO0826	PF02796	Helix-turn-helix domain of resolvase
YPO0829	PF00884	Sulfatase
YPO0831	PF00455	YPO0831
YPO0831	PF08220	DeoR-like helix-turn-helix domain
YPO0832	PF08013	Tagatose 6 phosphate kinase
YPO0833	PF01380	SIS domain
YPO0834	PF03830	PTS system sorbose subfamily IIB component
YPO0835	PF03609	YPO0835
YPO0836	PF03613	YPO0836
YPO0837	PF03610	PTS system fructose IIA component
YPO0838	PF01979	Amidohydrolase family
YPO0839	PF13561	Enoyl-(Acyl carrier protein) reductase
YPO0840	PF07470	Glycosyl Hydrolase Family 88
YPO0841	PF04055	Radical SAM superfamily
YPO0841	PF13186	Iron-sulfur cluster-binding domain
YPO0842	PF00884	Sulfatase
YPO0843	PF10022	YPO0843
YPO0844	PF01116	Fructose-bisphosphate aldolase class-II
YPO0845	PF01965	DJ-1/PfpI family
YPO0846	PF00356	Bacterial regulatory proteins, lacI family
YPO0846	PF13377	Periplasmic binding protein-like domain
YPO0847	PF07690	Major Facilitator Superfamily
YPO0848	PF01055	Glycosyl hydrolases family 31
YPO0848	PF13802	Galactose mutarotase-like
YPO0848	PF17137	YPO0848
YPO0849	PF00356	Bacterial regulatory proteins, lacI family
YPO0849	PF13377	Periplasmic binding protein-like domain
YPO0850	PF02264	LamB porin
YPO0850a	PF00367	phosphotransferase system, EIIB
YPO0852	PF02449	Beta-galactosidase
YPO0852	PF08532	Beta-galactosidase trimerisation domain
YPO0852	PF08533	Beta-galactosidase C-terminal domain
YPO0853	PF07745	Glycosyl hydrolase family 53
YPO0854	PF00528	Binding-protein-dependent transport system inner membrane component
YPO0855	PF00528	Binding-protein-dependent transport system inner membrane component
YPO0856	PF13416	Bacterial extracellular solute-binding protein
YPO0857	PF00005	ABC transporter
YPO0857	PF08402	TOBE domain
YPO0858	PF00005	ABC transporter
YPO0859	PF02653	YPO0859
YPO0860	PF13407	Periplasmic binding protein domain
YPO0863	PF05708	Orthopoxvirus protein of unknown function (DUF830)
YPO0864	PF03551	Transcriptional regulator PadR-like family
YPO0865	PF12977	Domain of Unknown Function with PDB structure (DUF3861)
YPO0866	PF05488	PAAR motif
YPO0869	PF11340	YPO0869
YPO0871	PF09204	Bacterial self-protective colicin-like immunity
YPO0873	PF05488	PAAR motif
YPO0873	PF06958	S-type Pyocin
YPO0874	PF02661	Fic/DOC family
YPO0878	PF05930	Prophage CP4-57 regulatory protein (AlpA)
YPO0879	PF05973	YPO0879
YPO0880	PF03288	Poxvirus D5 protein-like
YPO0880	PF08273	Zinc-binding domain of primase-helicase
YPO0880	PF08706	YPO0880
YPO0880	PF13362	Toprim domain
YPO0881	PF15731	YPO0881
YPO0882	PF15723	YPO0882
YPO0883	PF01381	Helix-turn-helix
YPO0884	PF05016	Plasmid stabilisation system protein
YPO0887	PF00589	Phage integrase family
YPO0887	PF13356	Domain of unknown function (DUF4102)
YPO0888	PF00152	tRNA synthetases class II (D, K and N)
YPO0888	PF01336	OB-fold nucleic acid binding domain
YPO0890	PF01368	DHH family
YPO0890	PF02272	DHHA1 domain
YPO0891	PF10411	Disulfide bond isomerase protein N-terminus
YPO0891	PF13098	Thioredoxin-like domain
YPO0892	PF00589	Phage integrase family
YPO0892	PF02899	Phage integrase, N-terminal SAM-like domain
YPO0893	PF00258	Flavodoxin
YPO0894	PF06123	YPO0894
YPO0895	PF00512	His Kinase A (phospho-acceptor) domain
YPO0895	PF00672	HAMP domain
YPO0895	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YPO0895	PF14827	Sensory domain of two-component sensor kinase
YPO0896	PF00072	Response regulator receiver domain
YPO0896	PF00486	Transcriptional regulatory protein, C terminal
YPO0896a	PF07254	YPO0896a
YPO0897	PF03937	Flavinator of succinate dehydrogenase
YPO0898	PF01571	Aminomethyltransferase folate-binding domain
YPO0899	PF09933	YPO0899
YPO0900	PF03006	YPO0900
YPO0904	PF13924	YPO0904
YPO0905	PF02347	Glycine cleavage system P-protein
YPO0906	PF01597	Glycine cleavage H-protein
YPO0907	PF01571	Aminomethyltransferase folate-binding domain
YPO0907	PF08669	Glycine cleavage T-protein C-terminal barrel domain
YPO0908	PF01494	FAD binding domain
YPO0909	PF01494	FAD binding domain
YPO0910	PF00557	Metallopeptidase family M24
YPO0910	PF05195	Aminopeptidase P, N-terminal domain
YPO0911	PF03695	Uncharacterised protein family (UPF0149)
YPO0912	PF05164	Cell division protein ZapA
YPO0913	PF01812	5-formyltetrahydrofolate cyclo-ligase family
YPO0914	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
YPO0914	PF01842	ACT domain
YPO0914	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
YPO0915	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
YPO0916	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
YPO0916	PF03466	LysR substrate binding domain
YPO0917	PF04402	Protein of unknown function (DUF541)
YPO0918	PF01810	YPO0918
YPO0919	PF00924	Mechanosensitive ion channel
YPO0919	PF05552	Conserved TM helix
YPO0920	PF01116	Fructose-bisphosphate aldolase class-II
YPO0921	PF00162	Phosphoglycerate kinase
YPO0922	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
YPO0922	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
YPO0923	PF01695	IstB-like ATP binding protein
YPO0924	PF00665	Integrase core domain
YPO0924	PF02796	Helix-turn-helix domain of resolvase
YPO0925	PF01797	Transposase IS200 like
YPO0926	PF00456	Transketolase, thiamine diphosphate binding domain
YPO0926	PF02779	Transketolase, pyrimidine binding domain
YPO0926	PF02780	Transketolase, C-terminal domain
YPO0927	PF01435	Peptidase family M48
YPO0928	PF00355	Rieske [2Fe-2S] domain
YPO0929	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
YPO0929	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
YPO0931	PF00438	S-adenosylmethionine synthetase, N-terminal domain
YPO0931	PF02772	S-adenosylmethionine synthetase, central domain
YPO0931	PF02773	S-adenosylmethionine synthetase, C-terminal domain
YPO0932	PF10263	YPO0932
YPO0933	PF04231	Endonuclease I
YPO0934	PF04452	RNA methyltransferase
YPO0935	PF02951	Prokaryotic glutathione synthetase, N-terminal domain
YPO0935	PF02955	Prokaryotic glutathione synthetase, ATP-grasp domain
YPO0936	PF02622	Uncharacterized ACR, COG1678
YPO0937	PF03652	Uncharacterised protein family (UPF0081)
YPO0938	PF00795	Carbon-nitrogen hydrolase
YPO0939	PF04371	Porphyromonas-type peptidyl-arginine deiminase
YPO0940	PF00437	Type II/IV secretion system protein
YPO0941	PF01168	Alanine racemase, N-terminal domain
YPO0942	PF03807	NADP oxidoreductase coenzyme F420-dependent
YPO0942	PF14748	Pyrroline-5-carboxylate reductase dimerisation
YPO0943	PF02325	YPO0943
YPO0944	PF02594	Uncharacterised ACR, YggU family COG1872
YPO0945	PF01725	Ham1 family
YPO0946	PF04055	Radical SAM superfamily
YPO0946	PF06969	HemN C-terminal domain
YPO0947	PF11713	Peptidase C80 family
YPO0949	PF04960	Glutaminase
YPO0950	PF04320	YPO0950
YPO0951	PF02390	Putative methyltransferase
YPO0952	PF00633	Helix-hairpin-helix motif
YPO0952	PF00730	HhH-GPD superfamily base excision DNA repair protein
YPO0952	PF10576	Iron-sulfur binding domain of endonuclease III
YPO0952	PF14815	NUDIX domain
YPO0953	PF04362	Bacterial Fe(2+) trafficking
YPO0954	PF01464	Transglycosylase SLT domain
YPO0954	PF11873	Domain of unknown function (DUF3393)
YPO0955	PF01497	Periplasmic binding protein
YPO0956	PF00593	TonB dependent receptor
YPO0956	PF07715	TonB-dependent Receptor Plug Domain
YPO0957	PF02653	YPO0957
YPO0958	PF00005	ABC transporter
YPO0959	PF13407	Periplasmic binding protein domain
YPO0960	PF01276	Orn/Lys/Arg decarboxylase, major domain
YPO0960	PF03709	Orn/Lys/Arg decarboxylase, N-terminal domain
YPO0960	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
YPO0963	PF03400	YPO0963
YPO0964	PF03811	YPO0964
YPO0964	PF12759	YPO0964
YPO0966	PF01551	Peptidase family M23
YPO0968	PF03811	YPO0968
YPO0968	PF12759	YPO0968
YPO0970	PF05954	Phage late control gene D protein (GPD)
YPO0970	PF10106	YPO0970
YPO0970	PF13296	YPO0970
YPO0971	PF00004	ATPase family associated with various cellular activities (AAA)
YPO0971	PF07724	AAA domain (Cdc48 subfamily)
YPO0971	PF10431	C-terminal, D2-small domain, of ClpB protein
YPO0973	PF05638	Protein of unknown function (DUF796)
YPO0974	PF00691	OmpA family
YPO0975	PF09850	Uncharacterized protein conserved in bacteria (DUF2077)
YPO0976	PF05936	YPO0976
YPO0977	PF05943	YPO0977
YPO0978	PF05591	YPO0978
YPO0981	PF03811	YPO0981
YPO0981	PF12759	YPO0981
YPO0983	PF02517	CAAX protease self-immunity
YPO0984	PF00765	Autoinducer synthetase
YPO0985	PF00196	Bacterial regulatory proteins, luxR family
YPO0985	PF03472	Autoinducer binding domain
YPO0986	PF10503	Esterase PHB depolymerase
YPO0987	PF00775	Dioxygenase
YPO0988	PF07690	Major Facilitator Superfamily
YPO0991	PF13523	Acetyltransferase (GNAT) domain
YPO0992	PF04183	IucA / IucC family
YPO0992	PF06276	Ferric iron reductase FhuF-like transporter
YPO0993	PF13434	L-lysine 6-monooxygenase (NADPH-requiring)
YPO0994	PF00593	TonB dependent receptor
YPO0994	PF07715	TonB-dependent Receptor Plug Domain
YPO0995	PF13347	MFS/sugar transport protein
YPO0996	PF13518	Helix-turn-helix domain
YPO0997	PF00665	Integrase core domain
YPO0997	PF13276	YPO0997
YPO0998	PF00563	EAL domain
YPO0998	PF00989	PAS fold
YPO0998	PF00990	GGDEF domain
YPO0998	PF05228	YPO0998
YPO1000	PF16576	YPO1000
YPO1001	PF00873	AcrB/AcrD/AcrF family
YPO1002	PF07906	YPO1002
YPO1004	PF13018	YPO1004
YPO1005	PF12468	Type III secretion system leucine rich repeat protein
YPO1005	PF14496	C-terminal novel E3 ligase, LRR-interacting
YPO1006	PF12468	Type III secretion system leucine rich repeat protein
YPO1007	PF12468	Type III secretion system leucine rich repeat protein
YPO1007	PF14496	C-terminal novel E3 ligase, LRR-interacting
YPO1008	PF03806	YPO1008
YPO1009	PF01546	Peptidase family M20/M25/M40
YPO1009	PF07687	Peptidase dimerisation domain
YPO1011	PF00593	TonB dependent receptor
YPO1011	PF07715	TonB-dependent Receptor Plug Domain
YPO1012	PF00109	Beta-ketoacyl synthase, N-terminal domain
YPO1012	PF00501	AMP-binding enzyme
YPO1012	PF00550	Phosphopantetheine attachment site
YPO1012	PF02801	Beta-ketoacyl synthase, C-terminal domain
YPO1013	PF00665	Integrase core domain
YPO1013	PF02796	Helix-turn-helix domain of resolvase
YPO1014	PF01695	IstB-like ATP binding protein
YPO1016	PF10713	YPO1016
YPO1017	PF12528	YPO1017
YPO1018	PF04257	Exodeoxyribonuclease V, gamma subunit
YPO1019	PF00675	Insulinase (Peptidase family M16)
YPO1019	PF05193	Peptidase M16 inactive domain
YPO1019	PF16187	YPO1019
YPO1020	PF00580	UvrD/REP helicase N-terminal domain
YPO1020	PF13361	UvrD-like helicase C-terminal domain
YPO1021	PF13538	UvrD-like helicase C-terminal domain
YPO1021	PF13604	AAA domain
YPO1022	PF00583	Acetyltransferase (GNAT) family
YPO1022	PF00696	Amino acid kinase family
YPO1023	PF01520	N-acetylmuramoyl-L-alanine amidase
YPO1023	PF11741	AMIN domain
YPO1025	PF03562	MltA specific insert domain
YPO1025	PF06725	3D domain
YPO1026	PF00899	ThiF family
YPO1027	PF02657	Fe-S metabolism associated domain
YPO1028	PF00266	Aminotransferase class-V
YPO1029	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
YPO1029	PF03466	LysR substrate binding domain
YPO1030	PF04241	YPO1030
YPO1031	PF01728	FtsJ-like methyltransferase
YPO1032	PF01367	5'-3' exonuclease, C-terminal SAM fold
YPO1032	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
YPO1033	PF03641	Possible lysine decarboxylase
YPO1033	PF11892	Domain of unknown function (DUF3412)
YPO1033	PF14793	Domain of unknown function (DUF4478)
YPO1034	PF14489	QueF-like protein
YPO1034	PF14819	Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term
YPO1035	PF07348	Syd protein (SUKH-2)
YPO1036	PF01797	Transposase IS200 like
YPO1037	PF04287	tRNA pseudouridine synthase C
YPO1038	PF00849	RNA pseudouridylate synthase
YPO1039	PF00258	Flavodoxin
YPO1040	PF11944	YPO1040
YPO1041	PF00132	Bacterial transferase hexapeptide (six repeats)
YPO1041	PF14602	Hexapeptide repeat of succinyl-transferase
YPO1041	PF14805	Tetrahydrodipicolinate N-succinyltransferase N-terminal
YPO1042	PF01842	ACT domain
YPO1042	PF01909	Nucleotidyltransferase domain
YPO1042	PF01966	HD domain
YPO1042	PF08335	GlnD PII-uridylyltransferase
YPO1043	PF00557	Metallopeptidase family M24
YPO1044	PF00318	Ribosomal protein S2
YPO1045	PF00889	Elongation factor TS
YPO1046	PF00696	Amino acid kinase family
YPO1047	PF01765	Ribosome recycling factor
YPO1048	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
YPO1048	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal
YPO1048	PF13288	DXP reductoisomerase C-terminal domain
YPO1049	PF01255	Putative undecaprenyl diphosphate synthase
YPO1050	PF01148	Cytidylyltransferase family
YPO1051	PF00595	PDZ domain (Also known as DHR or GLGF)
YPO1051	PF02163	Peptidase family M50
YPO1052	PF01103	Surface antigen
YPO1052	PF07244	Surface antigen variable number repeat
YPO1053	PF03938	Outer membrane protein (OmpH-like)
YPO1054	PF00132	Bacterial transferase hexapeptide (six repeats)
YPO1054	PF04613	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD
YPO1055	PF07977	FabA-like domain
YPO1056	PF00132	Bacterial transferase hexapeptide (six repeats)
YPO1056	PF13720	Udp N-acetylglucosamine O-acyltransferase; Domain 2
YPO1057	PF02684	YPO1057
YPO1058	PF01351	Ribonuclease HII
YPO1059	PF01336	OB-fold nucleic acid binding domain
YPO1059	PF02811	PHP domain
YPO1059	PF07733	Bacterial DNA polymerase III alpha subunit
YPO1059	PF14579	Helix-hairpin-helix motif
YPO1060	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
YPO1061	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YPO1062	PF01171	PP-loop family
YPO1062	PF09179	TilS substrate binding domain
YPO1062	PF11734	TilS substrate C-terminal domain
YPO1063	PF00034	Cytochrome c
YPO1064	PF07073	Modulator of Rho-dependent transcription termination (ROF)
YPO1064a	PF06786	YPO1064a
YPO1065	PF07152	YaeQ protein
YPO1066	PF00472	RF-1 domain
YPO1067	PF04170	NlpE N-terminal domain
YPO1067	PF17185	YPO1067
YPO1068	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
YPO1068	PF03129	Anticodon binding domain
YPO1068	PF04073	Aminoacyl-tRNA editing domain
YPO1069	PF01980	Uncharacterised protein family UPF0066
YPO1070	PF16358	YPO1070
YPO1071	PF03180	NLPA lipoprotein
YPO1072	PF00528	Binding-protein-dependent transport system inner membrane component
YPO1073	PF00005	ABC transporter
YPO1073	PF09383	NIL domain
YPO1074	PF13242	HAD-hyrolase-like
YPO1075	PF00248	Aldo/keto reductase family
YPO1077	PF03372	Endonuclease/Exonuclease/phosphatase family
YPO1078	PF01464	Transglycosylase SLT domain
YPO1078	PF01476	LysM domain
YPO1079	PF00753	Metallo-beta-lactamase superfamily
YPO1079	PF16123	YPO1079
YPO1080	PF08241	Methyltransferase domain
YPO1081	PF00075	RNase H
YPO1082	PF00929	Exonuclease
YPO1083	PF02133	Permease for cytosine/purines, uracil, thiamine, allantoin
YPO1085	PF01695	IstB-like ATP binding protein
YPO1086	PF00665	Integrase core domain
YPO1086	PF02796	Helix-turn-helix domain of resolvase
YPO1089	PF13481	AAA domain
YPO1090	PF08273	Zinc-binding domain of primase-helicase
YPO1090	PF13362	Toprim domain
YPO1091	PF10554	YPO1091
YPO1092	PF12834	YPO1092
YPO1092	PF12835	Integrase
YPO1097	PF14130	YPO1097
YPO1098	PF00589	Phage integrase family
YPO1098	PF13356	Domain of unknown function (DUF4102)
YPO1099	PF01797	Transposase IS200 like
YPO1101	PF01668	SmpB protein
YPO1102	PF03364	Polyketide cyclase / dehydrase and lipid transport
YPO1103	PF03658	RnfH family Ubiquitin
YPO1104	PF04355	SmpA / OmlA family
YPO1105	PF02463	RecF/RecN/SMC N terminal domain
YPO1106	PF01513	ATP-NAD kinase
YPO1107	PF01025	GrpE
YPO1108	PF00285	Citrate synthase
YPO1109	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
YPO1111	PF00890	FAD binding domain
YPO1111	PF02910	Fumarate reductase flavoprotein C-term
YPO1112	PF13085	2Fe-2S iron-sulfur cluster binding domain
YPO1112	PF13534	4Fe-4S dicluster domain
YPO1113	PF00676	Dehydrogenase E1 component
YPO1113	PF02779	Transketolase, pyrimidine binding domain
YPO1113	PF16078	YPO1113
YPO1113	PF16870	YPO1113
YPO1114	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
YPO1114	PF00364	Biotin-requiring enzyme
YPO1114	PF02817	e3 binding domain
YPO1115	PF00549	CoA-ligase
YPO1115	PF08442	ATP-grasp domain
YPO1116	PF00549	CoA-ligase
YPO1116	PF02629	CoA binding domain
YPO1117	PF01654	YPO1117
YPO1118	PF02322	YPO1118
YPO1119	PF09600	YPO1119
YPO1120	PF03061	Thioesterase superfamily
YPO1121	PF01618	YPO1121
YPO1122	PF02472	Biopolymer transport protein ExbD/TolR
YPO1123	PF06519	TolA C-terminal
YPO1124	PF04052	TolB amino-terminal domain
YPO1124	PF07676	WD40-like Beta Propeller Repeat
YPO1125	PF00691	OmpA family
YPO1126	PF13525	Outer membrane lipoprotein
YPO1126	PF16331	YPO1126
YPO1127	PF02445	Quinolinate synthetase A protein
YPO1128	PF04973	YPO1128
YPO1129	PF01545	Cation efflux family
YPO1129a	PF00793	DAHP synthetase I family
YPO1131	PF01695	IstB-like ATP binding protein
YPO1132	PF00665	Integrase core domain
YPO1132	PF02796	Helix-turn-helix domain of resolvase
YPO1133	PF00300	Histidine phosphatase superfamily (branch 1)
YPO1134	PF07769	YPO1134
YPO1137	PF00288	GHMP kinases N terminal domain
YPO1137	PF08544	GHMP kinases C terminal
YPO1137	PF10509	Galactokinase galactose-binding signature
YPO1138	PF01087	Galactose-1-phosphate uridyl transferase, N-terminal domain
YPO1138	PF02744	Galactose-1-phosphate uridyl transferase, C-terminal domain
YPO1139	PF16363	YPO1139
YPO1140	PF02517	CAAX protease self-immunity
YPO1142	PF00005	ABC transporter
YPO1143	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
YPO1143	PF03459	TOBE domain
YPO1144	PF10766	Protein of unknown function (DUF2592)
YPO1145	PF13531	Bacterial extracellular solute-binding protein
YPO1146	PF00528	Binding-protein-dependent transport system inner membrane component
YPO1147	PF00005	ABC transporter
YPO1147	PF03459	TOBE domain
YPO1148	PF08282	haloacid dehalogenase-like hydrolase
YPO1149	PF10282	Lactonase, 7-bladed beta-propeller
YPO1150	PF00202	Aminotransferase class-III
YPO1151	PF04055	Radical SAM superfamily
YPO1151	PF06968	Biotin and Thiamin Synthesis associated domain
YPO1152	PF00155	Aminotransferase class I and II
YPO1153	PF08241	Methyltransferase domain
YPO1154	PF13500	AAA domain
YPO1155	PF00005	ABC transporter
YPO1156	PF00271	Helicase conserved C-terminal domain
YPO1156	PF02151	UvrB/uvrC motif
YPO1156	PF04851	Type III restriction enzyme, res subunit
YPO1156	PF12344	Ultra-violet resistance protein B
YPO1157	PF09905	Uncharacterized conserved protein (DUF2132)
YPO1158	PF01933	Uncharacterised protein family UPF0052
YPO1159	PF04055	Radical SAM superfamily
YPO1159	PF06463	Molybdenum Cofactor Synthesis C
YPO1159	PF13353	4Fe-4S single cluster domain
YPO1160	PF01967	MoaC family
YPO1161	PF02597	ThiS family
YPO1162	PF02391	MoaE protein
YPO1163	PF01027	Inhibitor of apoptosis-promoting Bax1
YPO1164	PF01797	Transposase IS200 like
YPO1165	PF00732	GMC oxidoreductase
YPO1165	PF05199	GMC oxidoreductase
YPO1166	PF00171	Aldehyde dehydrogenase family
YPO1167	PF00440	Bacterial regulatory proteins, tetR family
YPO1167	PF13977	Bacterial transcriptional repressor
YPO1168	PF02028	BCCT family transporter
YPO1169	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
YPO1169	PF03466	LysR substrate binding domain
YPO1170	PF00892	EamA-like transporter family
YPO1171	PF01048	Phosphorylase superfamily
YPO1172	PF03825	YPO1172
YPO1173	PF01797	Transposase IS200 like
YPO1174	PF13349	YPO1174
YPO1175	PF01207	Dihydrouridine synthase (Dus)
YPO1176	PF00768	D-alanyl-D-alanine carboxypeptidase
YPO1177	PF01565	FAD binding domain
YPO1177	PF09330	D-lactate dehydrogenase, membrane binding
YPO1178	PF01928	CYTH domain
YPO1179	PF01844	HNH endonuclease
YPO1180	PF05076	Suppressor of fused protein (SUFU)
YPO1181	PF04226	YPO1181
YPO1182	PF00005	ABC transporter
YPO1183	PF12974	ABC transporter, phosphonate, periplasmic substrate-binding protein
YPO1184	PF00528	Binding-protein-dependent transport system inner membrane component
YPO1185	PF00528	Binding-protein-dependent transport system inner membrane component
YPO1186	PF07308	YPO1186
YPO1187	PF13433	Periplasmic binding protein domain
YPO1188	PF02653	YPO1188
YPO1188	PF13646	HEAT repeats
YPO1189	PF02653	YPO1189
YPO1190	PF00005	ABC transporter
YPO1190	PF12399	Branched-chain amino acid ATP-binding cassette transporter
YPO1191	PF00005	ABC transporter
YPO1192	PF13640	2OG-Fe(II) oxygenase superfamily
YPO1193	PF00282	Pyridoxal-dependent decarboxylase conserved domain
YPO1194	PF00581	Rhodanese-like domain
YPO1197	PF00528	Binding-protein-dependent transport system inner membrane component
YPO1198	PF00005	ABC transporter
YPO1199	PF00528	Binding-protein-dependent transport system inner membrane component
YPO1200	PF13520	Amino acid permease
YPO1201	PF01276	Orn/Lys/Arg decarboxylase, major domain
YPO1201	PF03709	Orn/Lys/Arg decarboxylase, N-terminal domain
YPO1201	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
YPO1203	PF00892	EamA-like transporter family
YPO1205	PF00267	Gram-negative porin
YPO1206	PF00270	DEAD/DEAH box helicase
YPO1206	PF06733	DEAD_2
YPO1206	PF13307	Helicase C-terminal domain
YPO1207	PF00199	Catalase
YPO1207	PF06628	Catalase-related immune-responsive
YPO1208	PF07437	YPO1208
YPO1209	PF03222	Tryptophan/tyrosine permease family
YPO1210	PF00994	Probable molybdopterin binding domain
YPO1211	PF03974	Ecotin
YPO1212	PF00111	2Fe-2S iron-sulfur cluster binding domain
YPO1213	PF00268	Ribonucleotide reductase, small chain
YPO1214	PF00317	Ribonucleotide reductase, all-alpha domain
YPO1214	PF02867	Ribonucleotide reductase, barrel domain
YPO1214	PF03477	ATP cone domain
YPO1215	PF13489	Methyltransferase domain
YPO1216	PF00521	DNA gyrase/topoisomerase IV, subunit A
YPO1216	PF03989	DNA gyrase C-terminal domain, beta-propeller
YPO1217	PF00072	Response regulator receiver domain
YPO1217	PF00512	His Kinase A (phospho-acceptor) domain
YPO1217	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YPO1217	PF09456	RcsC Alpha-Beta-Loop (ABL)
YPO1218	PF00072	Response regulator receiver domain
YPO1218	PF00196	Bacterial regulatory proteins, luxR family
YPO1221	PF07690	Major Facilitator Superfamily
YPO1223	PF01797	Transposase IS200 like
YPO1224	PF00144	Beta-lactamase
YPO1226	PF13347	MFS/sugar transport protein
YPO1228	PF12706	Beta-lactamase superfamily domain
YPO1229	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
YPO1229	PF00672	HAMP domain
YPO1229	PF02743	Cache domain
YPO1231	PF01278	Omptin family
YPO1232	PF06183	DinI-like family
YPO1233	PF00717	Peptidase S24-like
YPO1233	PF01381	Helix-turn-helix
YPO1234	PF06530	YPO1234
YPO1235	PF07005	Protein of unknown function, DUF1537
YPO1235	PF17042	YPO1235
YPO1236	PF00596	Class II Aldolase and Adducin N-terminal domain
YPO1237	PF00455	YPO1237
YPO1237	PF08220	DeoR-like helix-turn-helix domain
YPO1238	PF01261	Xylose isomerase-like TIM barrel
YPO1241	PF10948	YPO1241
YPO1242	PF04984	Phage tail sheath protein
YPO1243	PF10618	YPO1243
YPO1244	PF10109	YPO1244
YPO1246	PF07157	YPO1246
YPO1247	PF05954	Phage late control gene D protein (GPD)
YPO1248	PF06890	Bacteriophage Mu Gp45 protein
YPO1249	PF07409	YPO1249
YPO1250	PF04865	YPO1250
YPO1250a	PF10076	YPO1250a
YPO1251	PF10076	YPO1251
YPO1252	PF07484	Phage Tail Collar Domain
YPO1253	PF01380	SIS domain
YPO1253	PF01418	Helix-turn-helix domain, rpiR family
YPO1254	PF00232	Glycosyl hydrolase family 1
YPO1258	PF12639	DNase/tRNase domain of colicin-like bacteriocin
YPO1260	PF00884	Sulfatase
YPO1260	PF11893	YPO1260
YPO1261	PF07208	Protein of unknown function (DUF1414)
YPO1262	PF04245	YPO1262
YPO1263	PF01797	Transposase IS200 like
YPO1264	PF01386	Ribosomal L25p family
YPO1265	PF00271	Helicase conserved C-terminal domain
YPO1265	PF04851	Type III restriction enzyme, res subunit
YPO1266	PF00849	RNA pseudouridylate synthase
YPO1266	PF01479	S4 domain
YPO1267	PF07690	Major Facilitator Superfamily
YPO1269	PF13989	YPO1269
YPO1270	PF00005	ABC transporter
YPO1270	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
YPO1271	PF00528	Binding-protein-dependent transport system inner membrane component
YPO1271	PF12911	YPO1271
YPO1272	PF00528	Binding-protein-dependent transport system inner membrane component
YPO1273	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
YPO1275	PF00877	NlpC/P60 family
YPO1276	PF01569	PAP2 superfamily
YPO1277	PF02492	CobW/HypB/UreG, nucleotide-binding domain
YPO1277	PF07683	Cobalamin synthesis protein cobW C-terminal domain
YPO1279	PF00392	Bacterial regulatory proteins, gntR family
YPO1279	PF07729	FCD domain
YPO1280	PF01232	Mannitol dehydrogenase Rossmann domain
YPO1280	PF08125	Mannitol dehydrogenase C-terminal domain
YPO1283	PF03786	D-mannonate dehydratase (UxuA)
YPO1284	PF01132	Elongation factor P (EF-P) OB domain
YPO1284	PF08207	Elongation factor P (EF-P) KOW-like domain
YPO1284	PF09285	Elongation factor P, C-terminal
YPO1285	PF03222	Tryptophan/tyrosine permease family
YPO1286	PF03692	YPO1286
YPO1287	PF13561	Enoyl-(Acyl carrier protein) reductase
YPO1288	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
YPO1288	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
YPO1289	PF01557	Fumarylacetoacetate (FAA) hydrolase family
YPO1290	PF00171	Aldehyde dehydrogenase family
YPO1291	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
YPO1291	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
YPO1292	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
YPO1293	PF13407	Periplasmic binding protein domain
YPO1294	PF00005	ABC transporter
YPO1295	PF02653	YPO1295
YPO1296	PF00293	NUDIX domain
YPO1298	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
YPO1298	PF00381	PTS HPr component phosphorylation site
YPO1299	PF00294	pfkB family carbohydrate kinase
YPO1300	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
YPO1300	PF02378	Phosphotransferase system, EIIC
YPO1301	PF00486	Transcriptional regulatory protein, C terminal
YPO1304	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
YPO1304	PF02753	Pili assembly chaperone PapD, C-terminal domain
YPO1305	PF00577	Outer membrane usher protein
YPO1305	PF13953	PapC C-terminal domain
YPO1305	PF13954	PapC N-terminal domain
YPO1306	PF01261	Xylose isomerase-like TIM barrel
YPO1307	PF03601	YPO1307
YPO1308	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
YPO1308	PF03466	LysR substrate binding domain
YPO1309	PF00324	Amino acid permease
YPO1310	PF01497	Periplasmic binding protein
YPO1311	PF01032	FecCD transport family
YPO1312	PF00005	ABC transporter
YPO1313	PF00593	TonB dependent receptor
YPO1313	PF07715	TonB-dependent Receptor Plug Domain
YPO1314	PF00043	Glutathione S-transferase, C-terminal domain
YPO1314	PF13417	Glutathione S-transferase, N-terminal domain
YPO1315	PF12710	haloacid dehalogenase-like hydrolase
YPO1316	PF03171	2OG-Fe(II) oxygenase superfamily
YPO1316	PF14226	non-haem dioxygenase in morphine synthesis N-terminal
YPO1317	PF03180	NLPA lipoprotein
YPO1318	PF00005	ABC transporter
YPO1318	PF09383	NIL domain
YPO1319	PF00528	Binding-protein-dependent transport system inner membrane component
YPO1320	PF00768	D-alanyl-D-alanine carboxypeptidase
YPO1320	PF07943	Penicillin-binding protein 5, C-terminal domain
YPO1321	PF03222	Tryptophan/tyrosine permease family
YPO1322	PF00455	YPO1322
YPO1322	PF08220	DeoR-like helix-turn-helix domain
YPO1323	PF01791	DeoC/LacD family aldolase
YPO1324	PF01569	PAP2 superfamily
YPO1325	PF01569	PAP2 superfamily
YPO1326	PF02080	TrkA-C domain
YPO1326	PF06826	YPO1326
YPO1327	PF00462	Glutaredoxin
YPO1328	PF07214	YPO1328
YPO1330	PF10722	Putative bacterial sensory transduction regulator
YPO1331	PF13416	Bacterial extracellular solute-binding protein
YPO1332	PF00005	ABC transporter
YPO1332	PF08402	TOBE domain
YPO1333	PF00528	Binding-protein-dependent transport system inner membrane component
YPO1334	PF00528	Binding-protein-dependent transport system inner membrane component
YPO1335	PF10767	YPO1335
YPO1336	PF05958	tRNA (Uracil-5-)-methyltransferase
YPO1338	PF00665	Integrase core domain
YPO1338	PF02796	Helix-turn-helix domain of resolvase
YPO1339	PF01695	IstB-like ATP binding protein
YPO1342	PF01145	SPFH domain / Band 7 family
YPO1343	PF01497	Periplasmic binding protein
YPO1345	PF00005	ABC transporter
YPO1346	PF03059	Nicotianamine synthase protein
YPO1347	PF10100	YPO1347
YPO1348	PF00892	EamA-like transporter family
YPO1349	PF00528	Binding-protein-dependent transport system inner membrane component
YPO1350	PF00528	Binding-protein-dependent transport system inner membrane component
YPO1351	PF00497	Bacterial extracellular solute-binding proteins, family 3
YPO1352	PF00005	ABC transporter
YPO1353	PF01817	Chorismate mutase type II
YPO1354	PF12883	Protein of unknown function (DUF3828)
YPO1355	PF01370	NAD dependent epimerase/dehydratase family
YPO1356	PF11066	YPO1356
YPO1356	PF13460	NADH(P)-binding
YPO1357	PF01212	Beta-eliminating lyase
YPO1358	PF00205	Thiamine pyrophosphate enzyme, central domain
YPO1358	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
YPO1358	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
YPO1359	PF00111	2Fe-2S iron-sulfur cluster binding domain
YPO1359	PF00175	Oxidoreductase NAD-binding domain
YPO1359	PF00970	Oxidoreductase FAD-binding domain
YPO1360	PF03063	Prismane/CO dehydrogenase family
YPO1361	PF03956	YPO1361
YPO1362	PF11398	Protein of unknown function (DUF2813)
YPO1363	PF04393	YPO1363
YPO1364	PF16576	YPO1364
YPO1365	PF00005	ABC transporter
YPO1365	PF02687	YPO1365
YPO1365	PF12704	MacB-like periplasmic core domain
YPO1366	PF00313	'Cold-shock' DNA-binding domain
YPO1367	PF02617	ATP-dependent Clp protease adaptor protein ClpS
YPO1368	PF00004	ATPase family associated with various cellular activities (AAA)
YPO1368	PF02861	Clp amino terminal domain
YPO1368	PF07724	AAA domain (Cdc48 subfamily)
YPO1368	PF10431	C-terminal, D2-small domain, of ClpB protein
YPO1369	PF01797	Transposase IS200 like
YPO1370	PF01176	Translation initiation factor 1A / IF-1
YPO1371	PF03588	Leucyl/phenylalanyl-tRNA protein transferase
YPO1372	PF00005	ABC transporter
YPO1372	PF00664	ABC transporter transmembrane region
YPO1373	PF00005	ABC transporter
YPO1373	PF00664	ABC transporter transmembrane region
YPO1374	PF07992	Pyridine nucleotide-disulphide oxidoreductase
YPO1375	PF01037	AsnC family
YPO1375	PF13412	Winged helix-turn-helix DNA-binding
YPO1376	PF01580	FtsK/SpoIIIE family
YPO1376	PF09397	Ftsk gamma domain
YPO1376	PF13491	YPO1376
YPO1377	PF03548	Outer membrane lipoprotein carrier protein LolA
YPO1378	PF00004	ATPase family associated with various cellular activities (AAA)
YPO1378	PF12002	MgsA AAA+ ATPase C terminal
YPO1378	PF16193	YPO1378
YPO1379	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
YPO1379	PF02403	Seryl-tRNA synthetase N-terminal domain
YPO1380	PF07690	Major Facilitator Superfamily
YPO1381	PF04055	Radical SAM superfamily
YPO1381	PF13353	4Fe-4S single cluster domain
YPO1382	PF01755	YPO1382
YPO1383	PF01228	Glycine radical
YPO1383	PF02901	Pyruvate formate lyase
YPO1384	PF01226	Formate/nitrite transporter
YPO1385	PF02624	YcaO-like family
YPO1386	PF00710	Asparaginase
YPO1387	PF03895	YadA-like C-terminal region
YPO1387	PF05662	Coiled stalk of trimeric autotransporter adhesin
YPO1388	PF03895	YadA-like C-terminal region
YPO1389	PF00266	Aminotransferase class-V
YPO1390	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
YPO1391	PF02224	Cytidylate kinase
YPO1392	PF00575	S1 RNA binding domain
YPO1393	PF00216	Bacterial DNA-binding protein
YPO1394	PF00753	Metallo-beta-lactamase superfamily
YPO1394	PF03772	YPO1394
YPO1394	PF13567	YPO1394
YPO1395	PF00005	ABC transporter
YPO1395	PF00664	ABC transporter transmembrane region
YPO1396	PF02606	Tetraacyldisaccharide-1-P 4'-kinase
YPO1397	PF07063	Domain of unknown function (DUF1338)
YPO1398	PF00313	'Cold-shock' DNA-binding domain
YPO1399	PF03966	Trm112p-like protein
YPO1400	PF02348	Cytidylyltransferase
YPO1401	PF03881	Fructosamine kinase
YPO1402	PF13847	Methyltransferase domain
YPO1403	PF03882	KicB killing factor
YPO1403	PF17192	YPO1403
YPO1403	PF17193	YPO1403
YPO1404	PF04288	MukE-like family
YPO1405	PF04310	MukB N-terminal
YPO1405	PF13558	Putative exonuclease SbcCD, C subunit
YPO1405	PF16330	YPO1405
YPO1406	PF01797	Transposase IS200 like
YPO1407	PF01471	Putative peptidoglycan binding domain
YPO1407	PF03734	L,D-transpeptidase catalytic domain
YPO1408	PF05951	YPO1408
YPO1409	PF00753	Metallo-beta-lactamase superfamily
YPO1410	PF00155	Aminotransferase class I and II
YPO1411	PF00267	Gram-negative porin
YPO1412	PF00152	tRNA synthetases class II (D, K and N)
YPO1412	PF01336	OB-fold nucleic acid binding domain
YPO1413	PF04095	Nicotinate phosphoribosyltransferase (NAPRTase) family
YPO1414	PF01433	Peptidase family M1
YPO1414	PF11940	Domain of unknown function (DUF3458)
YPO1415	PF01180	Dihydroorotate dehydrogenase
YPO1416	PF07126	YPO1416
YPO1417	PF00111	2Fe-2S iron-sulfur cluster binding domain
YPO1417	PF03473	MOSC domain
YPO1417	PF03476	MOSC N-terminal beta barrel domain
YPO1418	PF01170	Putative RNA methylase family UPF0020
YPO1418	PF02926	THUMP domain
YPO1418	PF10672	S-adenosylmethionine-dependent methyltransferase
YPO1419	PF00005	ABC transporter
YPO1419	PF12848	ABC transporter
YPO1419	PF16326	YPO1419
YPO1420	PF04403	YPO1420
YPO1421	PF02470	YPO1421
YPO1422	PF03886	Protein of unknown function (DUF330)
YPO1423a	PF04957	Ribosome modulation factor
YPO1424	PF01797	Transposase IS200 like
YPO1425a	PF00109	Beta-ketoacyl synthase, N-terminal domain
YPO1425a	PF02801	Beta-ketoacyl synthase, C-terminal domain
YPO1426	PF01695	IstB-like ATP binding protein
YPO1427	PF00665	Integrase core domain
YPO1427	PF02796	Helix-turn-helix domain of resolvase
YPO1427b	PF00109	Beta-ketoacyl synthase, N-terminal domain
YPO1430	PF07977	FabA-like domain
YPO1431	PF05362	Lon protease (S16) C-terminal proteolytic domain
YPO1431	PF13654	AAA domain
YPO1433	PF06303	Organiser of macrodomain of Terminus of chromosome
YPO1434	PF01797	Transposase IS200 like
YPO1435	PF00691	OmpA family
YPO1435	PF01389	OmpA-like transmembrane domain
YPO1436	PF03846	Cell division inhibitor SulA
YPO1437	PF04993	TfoX N-terminal domain
YPO1437	PF04994	TfoX C-terminal domain
YPO1438	PF12805	YPO1438
YPO1438	PF13515	YPO1438
YPO1439	PF03733	YPO1439
YPO1440	PF00580	UvrD/REP helicase N-terminal domain
YPO1440	PF12462	YPO1440
YPO1440	PF13361	UvrD-like helicase C-terminal domain
YPO1441	PF02142	MGS-like domain
YPO1442	PF09829	YPO1442
YPO1443	PF13380	CoA binding domain
YPO1444	PF08755	Hemimethylated DNA-binding protein YccV like
YPO1445	PF10672	S-adenosylmethionine-dependent methyltransferase
YPO1446	PF00708	Acylphosphatase
YPO1447	PF04358	DsrC like protein
YPO1450a	PF13610	YPO1450a
YPO1451	PF01565	FAD binding domain
YPO1451	PF13480	Acetyltransferase (GNAT) domain
YPO1452	PF13561	Enoyl-(Acyl carrier protein) reductase
YPO1454	PF07977	FabA-like domain
YPO1455	PF00109	Beta-ketoacyl synthase, N-terminal domain
YPO1455	PF02801	Beta-ketoacyl synthase, C-terminal domain
YPO1456	PF13561	Enoyl-(Acyl carrier protein) reductase
YPO1457	PF01154	Hydroxymethylglutaryl-coenzyme A synthase N terminal
YPO1457	PF08540	Hydroxymethylglutaryl-coenzyme A synthase C terminal
YPO1458	PF00378	Enoyl-CoA hydratase/isomerase family
YPO1459	PF00378	Enoyl-CoA hydratase/isomerase family
YPO1460	PF13561	Enoyl-(Acyl carrier protein) reductase
YPO1461	PF13924	YPO1461
YPO1462	PF00550	Phosphopantetheine attachment site
YPO1463	PF00698	Acyl transferase domain
YPO1465	PF05591	YPO1465
YPO1466	PF05943	YPO1466
YPO1467	PF05936	YPO1467
YPO1468	PF09850	Uncharacterized protein conserved in bacteria (DUF2077)
YPO1469	PF00691	OmpA family
YPO1470	PF05638	Protein of unknown function (DUF796)
YPO1471	PF00004	ATPase family associated with various cellular activities (AAA)
YPO1471	PF07724	AAA domain (Cdc48 subfamily)
YPO1471	PF10431	C-terminal, D2-small domain, of ClpB protein
YPO1472	PF05954	Phage late control gene D protein (GPD)
YPO1472	PF10106	YPO1472
YPO1472	PF13296	YPO1472
YPO1473	PF01551	Peptidase family M23
YPO1475	PF10106	YPO1475
YPO1476	PF01551	Peptidase family M23
YPO1477a	PF13592	YPO1477a
YPO1482	PF06744	YPO1482
YPO1482	PF06761	YPO1482
YPO1483	PF06812	YPO1483
YPO1483	PF16989	YPO1483
YPO1484	PF05488	PAAR motif
YPO1484	PF15607	YPO1484
YPO1485	PF05947	YPO1485
YPO1486	PF06996	YPO1486
YPO1487	PF12790	Type VI secretion lipoprotein
YPO1488	PF04965	Gene 25-like lysozyme
YPO1489	PF06812	YPO1489
YPO1489	PF12486	YPO1489
YPO1490	PF16809	YPO1490
YPO1491	PF00005	ABC transporter
YPO1491	PF12848	ABC transporter
YPO1492	PF16809	YPO1492
YPO1493	PF00872	YPO1493
YPO1494	PF00899	ThiF family
YPO1495	PF00994	Probable molybdopterin binding domain
YPO1495	PF03453	MoeA N-terminal region (domain I and II)
YPO1495	PF03454	MoeA C-terminal region (domain IV)
YPO1496	PF04055	Radical SAM superfamily
YPO1497	PF00005	ABC transporter
YPO1498	PF13437	HlyD family secretion protein
YPO1501	PF00756	Putative esterase
YPO1502	PF00107	Zinc-binding dehydrogenase
YPO1502	PF08240	Alcohol dehydrogenase GroES-like domain
YPO1503	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
YPO1503	PF03466	LysR substrate binding domain
YPO1504	PF06779	YPO1504
YPO1505	PF01227	GTP cyclohydrolase I
YPO1506	PF04235	YPO1506
YPO1507	PF13407	Periplasmic binding protein domain
YPO1508	PF00005	ABC transporter
YPO1509	PF02653	YPO1509
YPO1510	PF02698	DUF218 domain
YPO1511	PF00390	Malic enzyme, N-terminal domain
YPO1511	PF03949	Malic enzyme, NAD binding domain
YPO1512	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
YPO1512	PF08211	Cytidine and deoxycytidylate deaminase zinc-binding region
YPO1513	PF04172	YPO1513
YPO1514	PF03788	YPO1514
YPO1515	PF07690	Major Facilitator Superfamily
YPO1516	PF08309	YPO1516
YPO1517	PF13407	Periplasmic binding protein domain
YPO1519	PF01695	IstB-like ATP binding protein
YPO1520	PF00665	Integrase core domain
YPO1520	PF02796	Helix-turn-helix domain of resolvase
YPO1521	PF01797	Transposase IS200 like
YPO1522	PF01588	Putative tRNA binding domain
YPO1522	PF09334	tRNA synthetases class I (M)
YPO1523	PF10609	ParA/MinD ATPase like
YPO1524	PF00485	Phosphoribulokinase / Uridine kinase family
YPO1525	PF00692	dUTPase
YPO1526	PF05170	YPO1526
YPO1526	PF13502	YPO1526
YPO1527	PF00571	CBS domain
YPO1527	PF03471	Transporter associated domain
YPO1527	PF03741	YPO1527
YPO1528	PF06276	Ferric iron reductase FhuF-like transporter
YPO1528	PF11575	YPO1528
YPO1529	PF00282	Pyridoxal-dependent decarboxylase conserved domain
YPO1530	PF13434	L-lysine 6-monooxygenase (NADPH-requiring)
YPO1531	PF13523	Acetyltransferase (GNAT) domain
YPO1532	PF04183	IucA / IucC family
YPO1532	PF06276	Ferric iron reductase FhuF-like transporter
YPO1533	PF00005	ABC transporter
YPO1534	PF01032	FecCD transport family
YPO1535	PF01032	FecCD transport family
YPO1536	PF01497	Periplasmic binding protein
YPO1537	PF00593	TonB dependent receptor
YPO1537	PF07715	TonB-dependent Receptor Plug Domain
YPO1538	PF04183	IucA / IucC family
YPO1538	PF06276	Ferric iron reductase FhuF-like transporter
YPO1539	PF00483	Nucleotidyl transferase
YPO1540	PF00483	Nucleotidyl transferase
YPO1541	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
YPO1541	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
YPO1542	PF01502	Phosphoribosyl-AMP cyclohydrolase
YPO1542	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
YPO1543	PF00977	Histidine biosynthesis protein
YPO1544	PF00977	Histidine biosynthesis protein
YPO1545	PF00117	Glutamine amidotransferase class-I
YPO1546	PF00475	Imidazoleglycerol-phosphate dehydratase
YPO1546	PF13242	HAD-hyrolase-like
YPO1547	PF00155	Aminotransferase class I and II
YPO1548	PF00815	Histidinol dehydrogenase
YPO1549	PF01634	ATP phosphoribosyltransferase
YPO1549	PF08029	HisG, C-terminal domain
YPO1551	PF01370	NAD dependent epimerase/dehydratase family
YPO1552	PF16695	YPO1552
YPO1553	PF02653	YPO1553
YPO1556	PF00465	Iron-containing alcohol dehydrogenase
YPO1557	PF13520	Amino acid permease
YPO1558	PF00929	Exonuclease
YPO1558	PF08411	Exonuclease C-terminal
YPO1559	PF07993	Male sterility protein
YPO1560	PF04363	YPO1560
YPO1561	PF00872	YPO1561
YPO1562	PF02369	Bacterial Ig-like domain (group 1)
YPO1562	PF09134	Invasin, domain 3
YPO1562	PF11924	Protein of unknown function (DUF3442)
YPO1563	PF07690	Major Facilitator Superfamily
YPO1564	PF04134	YPO1564
YPO1565	PF13561	Enoyl-(Acyl carrier protein) reductase
YPO1566	PF01557	Fumarylacetoacetate (FAA) hydrolase family
YPO1567	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
YPO1567	PF13378	Enolase C-terminal domain-like
YPO1569	PF01070	FMN-dependent dehydrogenase
YPO1570	PF00764	Arginosuccinate synthase
YPO1571	PF01554	MatE
YPO1572	PF07690	Major Facilitator Superfamily
YPO1573	PF01522	Polysaccharide deacetylase
YPO1575	PF09831	YPO1575
YPO1576	PF00072	Response regulator receiver domain
YPO1576	PF00196	Bacterial regulatory proteins, luxR family
YPO1577	PF06808	YPO1577
YPO1578	PF04290	YPO1578
YPO1579	PF03480	Bacterial extracellular solute-binding protein, family 7
YPO1580	PF01648	4'-phosphopantetheinyl transferase superfamily
YPO1581	PF02065	Melibiase
YPO1581	PF16875	YPO1581
YPO1582	PF01306	LacY proton/sugar symporter
YPO1583	PF00872	YPO1583
YPO1583a	PF13991	YPO1583a
YPO1584	PF13991	YPO1584
YPO1586	PF06183	DinI-like family
YPO1587	PF01979	Amidohydrolase family
YPO1588	PF03992	Antibiotic biosynthesis monooxygenase
YPO1589	PF00872	YPO1589
YPO1590	PF00575	S1 RNA binding domain
YPO1590	PF10150	Ribonuclease E/G family
YPO1590	PF12111	Polyribonucleotide phosphorylase C terminal
YPO1591	PF00849	RNA pseudouridylate synthase
YPO1591	PF01479	S4 domain
YPO1592	PF01797	Transposase IS200 like
YPO1593	PF02545	Maf-like protein
YPO1594	PF02620	YPO1594
YPO1595	PF01783	Ribosomal L32p protein family
YPO1596	PF02504	Fatty acid synthesis protein
YPO1597	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
YPO1597	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
YPO1598	PF00698	Acyl transferase domain
YPO1599	PF13561	Enoyl-(Acyl carrier protein) reductase
YPO1600	PF00550	Phosphopantetheine attachment site
YPO1601	PF00109	Beta-ketoacyl synthase, N-terminal domain
YPO1601	PF02801	Beta-ketoacyl synthase, C-terminal domain
YPO1602	PF01797	Transposase IS200 like
YPO1603	PF01063	Aminotransferase class IV
YPO1604	PF02618	YceG-like family
YPO1605	PF02223	Thymidylate kinase
YPO1606	PF09115	DNA polymerase III, delta subunit, C terminal
YPO1606	PF13177	DNA polymerase III, delta subunit
YPO1607	PF01026	TatD related DNase
YPO1608	PF00367	phosphotransferase system, EIIB
YPO1608	PF02378	Phosphotransferase system, EIIC
YPO1609	PF01797	Transposase IS200 like
YPO1610	PF08501	Shikimate dehydrogenase substrate binding domain
YPO1611	PF01230	HIT domain
YPO1612	PF07233	Protein of unknown function (DUF1425)
YPO1613	PF13036	Protein of unknown function (DUF3897)
YPO1614	PF01636	Phosphotransferase enzyme family
YPO1615	PF00933	Glycosyl hydrolase family 3 N terminal domain
YPO1616	PF05728	Uncharacterised protein family (UPF0227)
YPO1617	PF07992	Pyridine nucleotide-disulphide oxidoreductase
YPO1621	PF00872	YPO1621
YPO1622	PF01695	IstB-like ATP binding protein
YPO1623	PF00665	Integrase core domain
YPO1623	PF02796	Helix-turn-helix domain of resolvase
YPO1624	PF05433	YPO1624
YPO1625	PF00270	DEAD/DEAH box helicase
YPO1625	PF00271	Helicase conserved C-terminal domain
YPO1625	PF02559	CarD-like/TRCF domain
YPO1625	PF03461	TRCF domain
YPO1626	PF02687	YPO1626
YPO1626	PF12704	MacB-like periplasmic core domain
YPO1627	PF00005	ABC transporter
YPO1628	PF02687	YPO1628
YPO1628	PF12704	MacB-like periplasmic core domain
YPO1629	PF00480	ROK family
YPO1630	PF02146	Sir2 family
YPO1631	PF01546	Peptidase family M20/M25/M40
YPO1631	PF07687	Peptidase dimerisation domain
YPO1632	PF08007	Cupin superfamily protein
YPO1633	PF00672	HAMP domain
YPO1633	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YPO1633	PF08918	PhoQ Sensor
YPO1634	PF00072	Response regulator receiver domain
YPO1634	PF00486	Transcriptional regulatory protein, C terminal
YPO1635	PF13505	Outer membrane protein beta-barrel domain
YPO1636	PF00206	Lyase
YPO1636	PF08328	Adenylosuccinate lyase C-terminal
YPO1637	PF04356	Protein of unknown function (DUF489)
YPO1638	PF03054	tRNA methyl transferase
YPO1639	PF00293	NUDIX domain
YPO1640	PF00849	RNA pseudouridylate synthase
YPO1641	PF00180	Isocitrate/isopropylmalate dehydrogenase
YPO1642	PF00356	Bacterial regulatory proteins, lacI family
YPO1642	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
YPO1644	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
YPO1644	PF00672	HAMP domain
YPO1644	PF08447	PAS fold
YPO1645	PF05368	NmrA-like family
YPO1646	PF01638	HxlR-like helix-turn-helix
YPO1648	PF00328	Histidine phosphatase superfamily (branch 2)
YPO1649	PF14001	YPO1649
YPO1650	PF11004	YPO1650
YPO1651	PF01037	AsnC family
YPO1651	PF13412	Winged helix-turn-helix DNA-binding
YPO1652	PF10777	YPO1652
YPO1653	PF00107	Zinc-binding dehydrogenase
YPO1653	PF08240	Alcohol dehydrogenase GroES-like domain
YPO1654	PF00703	Glycosyl hydrolases family 2
YPO1654	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
YPO1654	PF02837	Glycosyl hydrolases family 2, sugar binding domain
YPO1654	PF02929	Beta galactosidase small chain
YPO1654	PF16353	YPO1654
YPO1655	PF00313	'Cold-shock' DNA-binding domain
YPO1656	PF10781	YPO1656
YPO1660	PF02308	YPO1660
YPO1661	PF00122	E1-E2 ATPase
YPO1661	PF00689	Cation transporting ATPase, C-terminus
YPO1661	PF00690	Cation transporter/ATPase, N-terminus
YPO1661	PF00702	haloacid dehalogenase-like hydrolase
YPO1663	PF05280	Flagellar transcriptional activator (FlhC)
YPO1664	PF01618	YPO1664
YPO1665	PF00691	OmpA family
YPO1665	PF13677	YPO1665
YPO1666	PF01584	CheW-like domain
YPO1666	PF01627	Hpt domain
YPO1666	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YPO1666	PF02895	Signal transducing histidine kinase, homodimeric domain
YPO1666	PF09078	CheY binding
YPO1667	PF01584	CheW-like domain
YPO1668	PF07690	Major Facilitator Superfamily
YPO1669	PF01042	Endoribonuclease L-PSP
YPO1670	PF01261	Xylose isomerase-like TIM barrel
YPO1671	PF08348	YPO1671
YPO1671	PF13309	YPO1671
YPO1672	PF03797	Autotransporter beta-domain
YPO1673	PF10101	YPO1673
YPO1675	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
YPO1675	PF00672	HAMP domain
YPO1675	PF02203	Tar ligand binding domain homologue
YPO1678	PF01739	CheR methyltransferase, SAM binding domain
YPO1678	PF03705	CheR methyltransferase, all-alpha domain
YPO1679	PF00072	Response regulator receiver domain
YPO1679	PF01339	CheB methylesterase
YPO1680	PF00072	Response regulator receiver domain
YPO1681	PF04344	Chemotaxis phosphatase, CheZ
YPO1683	PF01510	N-acetylmuramoyl-L-alanine amidase
YPO1684	PF05658	Head domain of trimeric autotransporter adhesin
YPO1684	PF05662	Coiled stalk of trimeric autotransporter adhesin
YPO1687	PF00842	Alanine racemase, C-terminal domain
YPO1687	PF01168	Alanine racemase, N-terminal domain
YPO1689	PF01734	Patatin-like phospholipase
YPO1691	PF01695	IstB-like ATP binding protein
YPO1692	PF00665	Integrase core domain
YPO1692	PF02796	Helix-turn-helix domain of resolvase
YPO1693	PF04266	ASCH domain
YPO1694	PF07351	YPO1694
YPO1695	PF05229	YPO1695
YPO1696	PF00577	Outer membrane usher protein
YPO1696	PF13953	PapC C-terminal domain
YPO1697	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
YPO1698	PF05229	YPO1698
YPO1699	PF05229	YPO1699
YPO1700	PF05229	YPO1700
YPO1701	PF02470	YPO1701
YPO1702	PF04403	YPO1702
YPO1703	PF13185	GAF domain
YPO1704	PF04352	ProQ/FINO family
YPO1705	PF00595	PDZ domain (Also known as DHR or GLGF)
YPO1705	PF03572	Peptidase family S41
YPO1705	PF11818	YPO1705
YPO1706	PF01435	Peptidase family M48
YPO1707	PF16970	YPO1707
YPO1708	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
YPO1708	PF02753	Pili assembly chaperone PapD, C-terminal domain
YPO1709	PF00577	Outer membrane usher protein
YPO1709	PF13953	PapC C-terminal domain
YPO1709	PF13954	PapC N-terminal domain
YPO1710	PF00419	Fimbrial protein
YPO1711	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
YPO1711	PF02753	Pili assembly chaperone PapD, C-terminal domain
YPO1712	PF07690	Major Facilitator Superfamily
YPO1713	PF14583	Oligogalacturonate lyase
YPO1714	PF01614	Bacterial transcriptional regulator
YPO1714	PF09339	IclR helix-turn-helix domain
YPO1715	PF01471	Putative peptidoglycan binding domain
YPO1715	PF01510	N-acetylmuramoyl-L-alanine amidase
YPO1716	PF00375	Sodium:dicarboxylate symporter family
YPO1717	PF04307	YPO1717
YPO1718	PF06178	Oligogalacturonate-specific porin protein (KdgM)
YPO1719	PF01547	Bacterial extracellular solute-binding protein
YPO1720	PF00005	ABC transporter
YPO1721	PF00528	Binding-protein-dependent transport system inner membrane component
YPO1722	PF00528	Binding-protein-dependent transport system inner membrane component
YPO1723	PF06917	Periplasmic pectate lyase
YPO1724	PF13561	Enoyl-(Acyl carrier protein) reductase
YPO1725	PF04962	KduI/IolB family
YPO1726	PF07883	Cupin domain
YPO1727	PF00872	YPO1727
YPO1729	PF00665	Integrase core domain
YPO1729	PF02796	Helix-turn-helix domain of resolvase
YPO1730	PF01695	IstB-like ATP binding protein
YPO1732	PF06167	Glucose-regulated metallo-peptidase M90
YPO1733	PF03795	YCII-related domain
YPO1734	PF01163	RIO1 family
YPO1735	PF00005	ABC transporter
YPO1735	PF00664	ABC transporter transmembrane region
YPO1737	PF12833	Helix-turn-helix domain
YPO1738	PF10964	YPO1738
YPO1739	PF13996	YPO1739
YPO1740	PF13974	YPO1740
YPO1741	PF10765	Protein of unknown function (DUF2591)
YPO1742	PF13269	YPO1742
YPO1743	PF00324	Amino acid permease
YPO1744	PF07017	Antimicrobial peptide resistance and lipid A acylation protein PagP
YPO1745	PF10736	YPO1745
YPO1746	PF00313	'Cold-shock' DNA-binding domain
YPO1747	PF02578	Multi-copper polyphenol oxidoreductase laccase
YPO1748	PF13847	Methyltransferase domain
YPO1750	PF00665	Integrase core domain
YPO1750	PF02796	Helix-turn-helix domain of resolvase
YPO1751	PF01695	IstB-like ATP binding protein
YPO1751a	PF00989	PAS fold
YPO1751a	PF00990	GGDEF domain
YPO1751a	PF13426	PAS domain
YPO1753	PF00593	TonB dependent receptor
YPO1753	PF07715	TonB-dependent Receptor Plug Domain
YPO1754	PF02659	YPO1754
YPO1755	PF06173	YPO1755
YPO1756	PF03613	YPO1756
YPO1757	PF03609	YPO1757
YPO1758	PF03610	PTS system fructose IIA component
YPO1758	PF03830	PTS system sorbose subfamily IIB component
YPO1760	PF01047	MarR family
YPO1761	PF01557	Fumarylacetoacetate (FAA) hydrolase family
YPO1761a	PF01557	Fumarylacetoacetate (FAA) hydrolase family
YPO1763	PF00171	Aldehyde dehydrogenase family
YPO1764	PF02900	Catalytic LigB subunit of aromatic ring-opening dioxygenase
YPO1765	PF02962	5-carboxymethyl-2-hydroxymuconate isomerase
YPO1767	PF03328	HpcH/HpaI aldolase/citrate lyase family
YPO1768	PF07690	Major Facilitator Superfamily
YPO1768	PF11700	YPO1768
YPO1769	PF03241	4-hydroxyphenylacetate 3-hydroxylase C terminal
YPO1769	PF11794	4-hydroxyphenylacetate 3-hydroxylase N terminal
YPO1770	PF01613	Flavin reductase like domain
YPO1771	PF03313	YPO1771
YPO1771	PF03315	Serine dehydratase beta chain
YPO1772	PF00293	NUDIX domain
YPO1773	PF00425	chorismate binding enzyme
YPO1773	PF04715	Anthranilate synthase component I, N terminal region
YPO1774	PF03701	YPO1774
YPO1775	PF02222	ATP-grasp domain
YPO1776	PF00270	DEAD/DEAH box helicase
YPO1776	PF00271	Helicase conserved C-terminal domain
YPO1776	PF03880	DbpA RNA binding domain
YPO1777	PF07130	YebG protein
YPO1778	PF04266	ASCH domain
YPO1779	PF13995	YebF-like protein
YPO1780	PF00326	Prolyl oligopeptidase family
YPO1780	PF02897	Prolyl oligopeptidase, N-terminal beta-propeller domain
YPO1781	PF00561	alpha/beta hydrolase fold
YPO1782	PF06440	DNA polymerase III, theta subunit
YPO1783	PF00210	Ferritin-like domain
YPO1784	PF04234	CopC domain
YPO1785	PF05425	YPO1785
YPO1786	PF10709	YPO1786
YPO1788	PF07377	Protein of unknown function (DUF1493)
YPO1790	PF01312	FlhB HrpN YscU SpaS Family
YPO1791	PF00771	FHIPEP family
YPO1792	PF06366	YPO1792
YPO1794	PF01797	Transposase IS200 like
YPO1796	PF05130	FlgN protein
YPO1797	PF04316	Anti-sigma-28 factor, FlgM
YPO1798	PF13144	SAF-like
YPO1799	PF00460	Flagella basal body rod protein
YPO1800	PF00460	Flagella basal body rod protein
YPO1800	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
YPO1801	PF03963	YPO1801
YPO1801	PF13860	FlgD Ig-like domain
YPO1801	PF13861	FlgD Tudor-like domain
YPO1802	PF00460	Flagella basal body rod protein
YPO1802	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
YPO1802	PF07559	Flagellar basal body protein FlaE
YPO1803	PF00460	Flagella basal body rod protein
YPO1804	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
YPO1805	PF02107	YPO1805
YPO1806	PF02119	YPO1806
YPO1807	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
YPO1807	PF10135	YPO1807
YPO1808	PF00460	Flagella basal body rod protein
YPO1808	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
YPO1809	PF00669	Bacterial flagellin N-terminal helical region
YPO1810	PF04198	Putative sugar-binding domain
YPO1811	PF00596	Class II Aldolase and Adducin N-terminal domain
YPO1811	PF13561	Enoyl-(Acyl carrier protein) reductase
YPO1812	PF02653	YPO1812
YPO1813	PF13407	Periplasmic binding protein domain
YPO1814	PF00005	ABC transporter
YPO1815	PF02653	YPO1815
YPO1816	PF00294	pfkB family carbohydrate kinase
YPO1817	PF15919	YPO1817
YPO1818	PF07927	YcfA-like protein
YPO1819	PF01311	YPO1819
YPO1820	PF00813	YPO1820
YPO1820a	PF01313	YPO1820a
YPO1821	PF04347	YPO1821
YPO1822	PF01052	Surface presentation of antigens (SPOA)
YPO1822	PF16973	YPO1822
YPO1823	PF01052	Surface presentation of antigens (SPOA)
YPO1823	PF02154	Flagellar motor switch protein FliM
YPO1824	PF03748	YPO1824
YPO1825	PF02120	Flagellar hook-length control protein FliK
YPO1826	PF02050	Flagellar FliJ protein
YPO1827	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
YPO1828	PF02108	YPO1828
YPO1829	PF01706	FliG C-terminal domain
YPO1829	PF14841	FliG middle domain
YPO1829	PF14842	FliG N-terminal domain
YPO1830	PF01514	Secretory protein of YscJ/FliF family
YPO1830	PF08345	YPO1830
YPO1831	PF02049	YPO1831
YPO1833	PF02661	Fic/DOC family
YPO1834	PF00730	HhH-GPD superfamily base excision DNA repair protein
YPO1837	PF12833	Helix-turn-helix domain
YPO1839	PF05400	Flagellar protein FliT
YPO1840	PF02561	Flagellar protein FliS
YPO1841	PF02465	YPO1841
YPO1841	PF07195	YPO1841
YPO1841	PF07196	Flagellin hook IN motif
YPO1842	PF00669	Bacterial flagellin N-terminal helical region
YPO1842	PF00700	Bacterial flagellin C-terminal helical region
YPO1843	PF04539	Sigma-70 region 3
YPO1843	PF04542	Sigma-70 region 2
YPO1843	PF04545	Sigma-70, region 4
YPO1844	PF02899	Phage integrase, N-terminal SAM-like domain
YPO1845	PF00291	Pyridoxal-phosphate dependent enzyme
YPO1846	PF00497	Bacterial extracellular solute-binding proteins, family 3
YPO1847	PF00528	Binding-protein-dependent transport system inner membrane component
YPO1848	PF00005	ABC transporter
YPO1851	PF00171	Aldehyde dehydrogenase family
YPO1851	PF01619	Proline dehydrogenase
YPO1851	PF14850	DNA-binding domain of Proline dehydrogenase
YPO1853	PF00474	Sodium:solute symporter family
YPO1854	PF03239	YPO1854
YPO1855	PF09375	Imelysin
YPO1855	PF13473	Cupredoxin-like domain
YPO1856	PF04261	Dyp-type peroxidase family
YPO1857	PF03358	NADPH-dependent FMN reductase
YPO1858	PF01344	Kelch motif
YPO1859	PF00324	Amino acid permease
YPO1860	PF13505	Outer membrane protein beta-barrel domain
YPO1863	PF06942	YPO1863
YPO1864	PF10769	YPO1864
YPO1865	PF00072	Response regulator receiver domain
YPO1865	PF00196	Bacterial regulatory proteins, luxR family
YPO1866	PF01541	GIY-YIG catalytic domain
YPO1866	PF02151	UvrB/uvrC motif
YPO1866	PF08459	UvrC Helix-hairpin-helix N-terminal
YPO1866	PF14520	Helix-hairpin-helix domain
YPO1867	PF01066	CDP-alcohol phosphatidyltransferase
YPO1873	PF00665	Integrase core domain
YPO1873	PF13565	YPO1873
YPO1874	PF01527	Transposase
YPO1880	PF04965	Gene 25-like lysozyme
YPO1881	PF04717	Phage-related baseplate assembly protein
YPO1882	PF14384	YPO1882
YPO1883	PF13676	TIR domain
YPO1890	PF00392	Bacterial regulatory proteins, gntR family
YPO1890	PF07702	UTRA domain
YPO1892	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
YPO1893	PF01547	Bacterial extracellular solute-binding protein
YPO1894	PF00528	Binding-protein-dependent transport system inner membrane component
YPO1895	PF00528	Binding-protein-dependent transport system inner membrane component
YPO1900	PF00665	Integrase core domain
YPO1900	PF02796	Helix-turn-helix domain of resolvase
YPO1901	PF01695	IstB-like ATP binding protein
YPO1902	PF11198	YPO1902
YPO1904	PF05930	Prophage CP4-57 regulatory protein (AlpA)
YPO1906	PF00593	TonB dependent receptor
YPO1906	PF07715	TonB-dependent Receptor Plug Domain
YPO1907	PF00501	AMP-binding enzyme
YPO1907	PF13193	AMP-binding enzyme C-terminal domain
YPO1908	PF00975	Thioesterase domain
YPO1909	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
YPO1910	PF00109	Beta-ketoacyl synthase, N-terminal domain
YPO1910	PF00550	Phosphopantetheine attachment site
YPO1910	PF00668	Condensation domain
YPO1910	PF00698	Acyl transferase domain
YPO1910	PF00975	Thioesterase domain
YPO1910	PF02801	Beta-ketoacyl synthase, C-terminal domain
YPO1910	PF08242	Methyltransferase domain
YPO1910	PF08415	YPO1910
YPO1910	PF08659	KR domain
YPO1910	PF16197	YPO1910
YPO1911	PF00501	AMP-binding enzyme
YPO1911	PF00550	Phosphopantetheine attachment site
YPO1911	PF00668	Condensation domain
YPO1911	PF08242	Methyltransferase domain
YPO1911	PF08415	YPO1911
YPO1912	PF12833	Helix-turn-helix domain
YPO1913	PF00005	ABC transporter
YPO1913	PF00664	ABC transporter transmembrane region
YPO1914	PF00005	ABC transporter
YPO1914	PF00664	ABC transporter transmembrane region
YPO1915	PF07690	Major Facilitator Superfamily
YPO1916	PF00425	chorismate binding enzyme
YPO1917	PF00589	Phage integrase family
YPO1917	PF13356	Domain of unknown function (DUF4102)
YPO1917	PF14659	Phage integrase, N-terminal SAM-like domain
YPO1918	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
YPO1918	PF02753	Pili assembly chaperone PapD, C-terminal domain
YPO1919	PF00419	Fimbrial protein
YPO1920	PF00577	Outer membrane usher protein
YPO1920	PF13953	PapC C-terminal domain
YPO1920	PF13954	PapC N-terminal domain
YPO1921	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
YPO1921	PF02753	Pili assembly chaperone PapD, C-terminal domain
YPO1922	PF00419	Fimbrial protein
YPO1925	PF00072	Response regulator receiver domain
YPO1925	PF00196	Bacterial regulatory proteins, luxR family
YPO1926	PF02550	Acetyl-CoA hydrolase/transferase N-terminal domain
YPO1926	PF13336	Acetyl-CoA hydrolase/transferase C-terminal domain
YPO1927	PF01575	MaoC like domain
YPO1928	PF03328	HpcH/HpaI aldolase/citrate lyase family
YPO1929	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
YPO1929	PF03466	LysR substrate binding domain
YPO1932	PF07690	Major Facilitator Superfamily
YPO1933	PF04909	Amidohydrolase
YPO1934	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
YPO1934	PF03466	LysR substrate binding domain
YPO1935	PF02508	YPO1935
YPO1936	PF00155	Aminotransferase class I and II
YPO1937	PF00324	Amino acid permease
YPO1938	PF00455	YPO1938
YPO1938	PF08220	DeoR-like helix-turn-helix domain
YPO1939	PF04960	Glutaminase
YPO1940	PF07690	Major Facilitator Superfamily
YPO1941	PF03239	YPO1941
YPO1942	PF10634	Fe2+ transport protein
YPO1943	PF04945	YHS domain
YPO1943	PF10080	YPO1943
YPO1944	PF02687	YPO1944
YPO1945	PF02687	YPO1945
YPO1945	PF12704	MacB-like periplasmic core domain
YPO1946	PF00005	ABC transporter
YPO1947	PF00578	AhpC/TSA family
YPO1948	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
YPO1949	PF03848	Tellurite resistance protein TehB
YPO1949	PF09313	Domain of unknown function (DUF1971)
YPO1950	PF00557	Metallopeptidase family M24
YPO1950	PF01321	Creatinase/Prolidase N-terminal domain
YPO1952	PF01522	Polysaccharide deacetylase
YPO1952	PF14883	Hypothetical glycosyl hydrolase family 13
YPO1953	PF00535	Glycosyl transferase family 2
YPO1954	PF13994	YPO1954
YPO1955	PF13302	Acetyltransferase (GNAT) domain
YPO1957	PF02562	PhoH-like protein
YPO1958	PF01699	Sodium/calcium exchanger protein
YPO1959	PF00672	HAMP domain
YPO1959	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YPO1959	PF07730	Histidine kinase
YPO1959	PF13675	Type IV pili methyl-accepting chemotaxis transducer N-term
YPO1960	PF00155	Aminotransferase class I and II
YPO1960	PF00392	Bacterial regulatory proteins, gntR family
YPO1962	PF00202	Aminotransferase class-III
YPO1963	PF04958	Arginine N-succinyltransferase beta subunit
YPO1964	PF00171	Aldehyde dehydrogenase family
YPO1965	PF04996	Succinylarginine dihydrolase
YPO1966	PF04952	Succinylglutamate desuccinylase / Aspartoacylase family
YPO1968	PF00665	Integrase core domain
YPO1968	PF02796	Helix-turn-helix domain of resolvase
YPO1969	PF01695	IstB-like ATP binding protein
YPO1971	PF05013	N-formylglutamate amidohydrolase
YPO1972	PF01979	Amidohydrolase family
YPO1973	PF00392	Bacterial regulatory proteins, gntR family
YPO1973	PF07702	UTRA domain
YPO1974	PF01979	Amidohydrolase family
YPO1975	PF05962	HutD
YPO1976	PF00425	chorismate binding enzyme
YPO1979	PF01370	NAD dependent epimerase/dehydratase family
YPO1980	PF00753	Metallo-beta-lactamase superfamily
YPO1982	PF01370	NAD dependent epimerase/dehydratase family
YPO1983	PF13506	Glycosyl transferase family 21
YPO1985	PF04101	Glycosyltransferase family 28 C-terminal domain
YPO1988	PF00872	YPO1988
YPO1989	PF07661	YPO1989
YPO1989	PF08238	Sel1 repeat
YPO1990	PF13226	YPO1990
YPO1991	PF02502	Ribose/Galactose Isomerase
YPO1991	PF12408	Ribose-5-phosphate isomerase
YPO1992	PF08242	Methyltransferase domain
YPO1993	PF00106	short chain dehydrogenase
YPO1996	PF13646	HEAT repeats
YPO1997	PF12697	Alpha/beta hydrolase family
YPO1998	PF07883	Cupin domain
YPO1999	PF02627	Carboxymuconolactone decarboxylase family
YPO2000	PF00512	His Kinase A (phospho-acceptor) domain
YPO2000	PF00672	HAMP domain
YPO2000	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YPO2001	PF00072	Response regulator receiver domain
YPO2001	PF00486	Transcriptional regulatory protein, C terminal
YPO2002	PF01738	Dienelactone hydrolase family
YPO2003	PF12682	Flavodoxin
YPO2004	PF14358	YPO2004
YPO2005	PF13316	YPO2005
YPO2007	PF07859	alpha/beta hydrolase fold
YPO2008	PF00581	Rhodanese-like domain
YPO2009	PF00665	Integrase core domain
YPO2010	PF01926	50S ribosome-binding GTPase
YPO2010	PF06071	Protein of unknown function (DUF933)
YPO2011	PF01195	Peptidyl-tRNA hydrolase
YPO2012	PF10762	YPO2012
YPO2013	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
YPO2013	PF14572	Phosphoribosyl synthetase-associated domain
YPO2014	PF00288	GHMP kinases N terminal domain
YPO2014	PF08544	GHMP kinases C terminal
YPO2015	PF03550	Outer membrane lipoprotein LolB
YPO2016	PF00745	Glutamyl-tRNAGlu reductase, dimerisation domain
YPO2016	PF01488	Shikimate / quinate 5-dehydrogenase
YPO2016	PF05201	Glutamyl-tRNAGlu reductase, N-terminal domain
YPO2017	PF00472	RF-1 domain
YPO2017	PF03462	PCRF domain
YPO2018	PF13847	Methyltransferase domain
YPO2019	PF04247	YPO2019
YPO2020	PF13369	YPO2020
YPO2020	PF13371	Tetratricopeptide repeat
YPO2021	PF00793	DAHP synthetase I family
YPO2023	PF01797	Transposase IS200 like
YPO2025	PF01695	IstB-like ATP binding protein
YPO2026	PF00665	Integrase core domain
YPO2026	PF02796	Helix-turn-helix domain of resolvase
YPO2028	PF03009	Glycerophosphoryl diester phosphodiesterase family
YPO2029	PF13416	Bacterial extracellular solute-binding protein
YPO2030	PF00528	Binding-protein-dependent transport system inner membrane component
YPO2031	PF00528	Binding-protein-dependent transport system inner membrane component
YPO2033	PF01797	Transposase IS200 like
YPO2035	PF03009	Glycerophosphoryl diester phosphodiesterase family
YPO2036	PF00480	ROK family
YPO2036	PF13412	Winged helix-turn-helix DNA-binding
YPO2037	PF02811	PHP domain
YPO2038	PF02613	Nitrate reductase delta subunit
YPO2039	PF07273	Protein of unknown function (DUF1439)
YPO2040	PF07690	Major Facilitator Superfamily
YPO2041	PF13302	Acetyltransferase (GNAT) domain
YPO2042	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
YPO2042	PF04337	Protein of unknown function, DUF480
YPO2043	PF03023	YPO2043
YPO2044	PF03865	Haemolysin secretion/activation protein ShlB/FhaC/HecB
YPO2044	PF08479	POTRA domain, ShlB-type
YPO2045	PF05860	haemagglutination activity domain
YPO2045	PF13332	YPO2045
YPO2046	PF00750	tRNA synthetases class I (R)
YPO2046	PF03485	Arginyl tRNA synthetase N terminal domain
YPO2046	PF05746	DALR anticodon binding domain
YPO2047	PF06185	YecM protein
YPO2048	PF03932	CutC family
YPO2049	PF08003	Protein of unknown function (DUF1698)
YPO2050	PF13649	Methyltransferase domain
YPO2051	PF01124	MAPEG family
YPO2052	PF01904	Protein of unknown function DUF72
YPO2053	PF00152	tRNA synthetases class II (D, K and N)
YPO2053	PF01336	OB-fold nucleic acid binding domain
YPO2053	PF02938	GAD domain
YPO2054	PF00293	NUDIX domain
YPO2055	PF01709	Transcriptional regulator
YPO2056	PF02075	Crossover junction endodeoxyribonuclease RuvC
YPO2057	PF01330	RuvA N terminal domain
YPO2057	PF07499	RuvA, C-terminal domain
YPO2057	PF14520	Helix-hairpin-helix domain
YPO2058	PF05491	Holliday junction DNA helicase ruvB C-terminus
YPO2058	PF05496	Holliday junction DNA helicase ruvB N-terminus
YPO2059	PF00950	YPO2059
YPO2060	PF00005	ABC transporter
YPO2061	PF01297	Periplasmic solute binding protein family
YPO2062	PF01551	Peptidase family M23
YPO2062	PF04225	Opacity-associated protein A LysM-like domain
YPO2062	PF08525	YPO2062
YPO2063	PF03279	YPO2063
YPO2064	PF00224	Pyruvate kinase, barrel domain
YPO2064	PF02887	Pyruvate kinase, alpha/beta domain
YPO2065	PF01380	SIS domain
YPO2065	PF01418	Helix-turn-helix domain, rpiR family
YPO2066	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
YPO2066	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
YPO2067	PF01081	KDPG and KHG aldolase
YPO2068	PF00893	Small Multidrug Resistance protein
YPO2069	PF00893	Small Multidrug Resistance protein
YPO2070	PF01042	Endoribonuclease L-PSP
YPO2071	PF00270	DEAD/DEAH box helicase
YPO2071	PF06733	DEAD_2
YPO2071	PF13307	Helicase C-terminal domain
YPO2072	PF00814	Glycoprotease family
YPO2073	PF03843	YPO2073
YPO2074	PF00501	AMP-binding enzyme
YPO2074	PF13193	AMP-binding enzyme C-terminal domain
YPO2075	PF00570	HRDC domain
YPO2075	PF01612	3'-5' exonuclease
YPO2076	PF03776	Septum formation topological specificity factor MinE
YPO2077	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
YPO2078	PF03775	Septum formation inhibitor MinC, C-terminal domain
YPO2078	PF05209	Septum formation inhibitor MinC, N-terminal domain
YPO2080	PF05166	YcgL domain
YPO2081	PF13406	Transglycosylase SLT domain
YPO2082	PF01557	Fumarylacetoacetate (FAA) hydrolase family
YPO2083	PF03692	YPO2083
YPO2085	PF00665	Integrase core domain
YPO2085	PF02796	Helix-turn-helix domain of resolvase
YPO2086	PF01695	IstB-like ATP binding protein
YPO2087	PF06806	Putative excisionase (DUF1233)
YPO2088	PF02086	D12 class N6 adenine-specific DNA methyltransferase
YPO2089	PF05772	NinB protein
YPO2090	PF05766	YPO2090
YPO2091	PF06530	YPO2091
YPO2093	PF02498	YPO2093
YPO2098	PF00959	Phage lysozyme
YPO2099	PF03245	YPO2099
YPO2100	PF03374	YPO2100
YPO2102	PF10045	YPO2102
YPO2104	PF00872	YPO2104
YPO2110	PF02368	Bacterial Ig-like domain (group 2)
YPO2115	PF13554	Bacteriophage related domain of unknown function
YPO2116	PF02368	Bacterial Ig-like domain (group 2)
YPO2116	PF08813	YPO2116
YPO2117	PF08748	YPO2117
YPO2118	PF08809	YPO2118
YPO2119	PF06791	YPO2119
YPO2119	PF09718	YPO2119
YPO2120	PF05939	YPO2120
YPO2121	PF01797	Transposase IS200 like
YPO2122	PF05100	YPO2122
YPO2123	PF00877	NlpC/P60 family
YPO2123	PF14464	Prokaryotic homologs of the JAB domain
YPO2126	PF02498	YPO2126
YPO2127	PF13248	YPO2127
YPO2129	PF06805	YPO2129
YPO2131	PF09327	YPO2131
YPO2131	PF13550	YPO2131
YPO2134	PF02413	YPO2134
YPO2136	PF00872	YPO2136
YPO2137	PF07690	Major Facilitator Superfamily
YPO2138	PF00266	Aminotransferase class-V
YPO2141	PF02600	Disulfide bond formation protein DsbB
YPO2142	PF06450	YPO2142
YPO2144	PF00392	Bacterial regulatory proteins, gntR family
YPO2144	PF07840	FadR C-terminal domain
YPO2145	PF04293	YPO2145
YPO2147	PF01266	FAD dependent oxidoreductase
YPO2148	PF07690	Major Facilitator Superfamily
YPO2149	PF02678	Pirin
YPO2149	PF05726	Pirin C-terminal cupin domain
YPO2150	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
YPO2150	PF03466	LysR substrate binding domain
YPO2151	PF00892	EamA-like transporter family
YPO2152	PF04285	YPO2152
YPO2153	PF06798	YPO2153
YPO2153	PF08298	PrkA AAA domain
YPO2155	PF06629	YPO2155
YPO2156	PF01263	Aldose 1-epimerase
YPO2157	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
YPO2157	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
YPO2158	PF01641	SelR domain
YPO2159	PF07023	YPO2159
YPO2160	PF00857	Isochorismatase family
YPO2161	PF00710	Asparaginase
YPO2162	PF01343	Peptidase family S49
YPO2163	PF00881	Nitroreductase family
YPO2164	PF00586	AIR synthase related protein, N-terminal domain
YPO2164	PF02769	AIR synthase related protein, C-terminal domain
YPO2165	PF01131	DNA topoisomerase
YPO2165	PF01751	Toprim domain
YPO2166	PF07383	YPO2166
YPO2167	PF00293	NUDIX domain
YPO2168	PF03372	Endonuclease/Exonuclease/phosphatase family
YPO2169	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
YPO2170	PF00872	YPO2170
YPO2171	PF00551	Formyl transferase
YPO2171	PF01842	ACT domain
YPO2172	PF02810	SEC-C motif
YPO2173	PF00072	Response regulator receiver domain
YPO2174	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
YPO2174	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
YPO2174	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
YPO2175	PF00816	H-NS histone family
YPO2176	PF00265	Thymidine kinase
YPO2177	PF01695	IstB-like ATP binding protein
YPO2178	PF00665	Integrase core domain
YPO2178	PF02796	Helix-turn-helix domain of resolvase
YPO2180	PF00171	Aldehyde dehydrogenase family
YPO2180	PF00465	Iron-containing alcohol dehydrogenase
YPO2181	PF01914	YPO2181
YPO2182	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
YPO2183	PF00528	Binding-protein-dependent transport system inner membrane component
YPO2184	PF00528	Binding-protein-dependent transport system inner membrane component
YPO2184	PF12911	YPO2184
YPO2185	PF00005	ABC transporter
YPO2185	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
YPO2186	PF00005	ABC transporter
YPO2186	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
YPO2187	PF04269	Protein of unknown function, DUF440
YPO2188	PF13091	PLD-like domain
YPO2188	PF13396	YPO2188
YPO2190	PF13505	Outer membrane protein beta-barrel domain
YPO2192	PF03795	YCII-related domain
YPO2193	PF03544	Gram-negative bacterial TonB protein C-terminal
YPO2193	PF16031	YPO2193
YPO2194	PF00872	YPO2194
YPO2195	PF03061	Thioesterase superfamily
YPO2196	PF04279	YPO2196
YPO2199	PF06790	YPO2199
YPO2201	PF03922	OmpW family
YPO2202	PF04972	BON domain
YPO2203	PF00290	Tryptophan synthase alpha chain
YPO2204	PF00291	Pyridoxal-phosphate dependent enzyme
YPO2205	PF00218	Indole-3-glycerol phosphate synthase
YPO2205	PF00697	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
YPO2206	PF00591	Glycosyl transferase family, a/b domain
YPO2206	PF02885	Glycosyl transferase family, helical bundle domain
YPO2207	PF00117	Glutamine amidotransferase class-I
YPO2208	PF00425	chorismate binding enzyme
YPO2208	PF04715	Anthranilate synthase component I, N terminal region
YPO2209	PF08255	YPO2209
YPO2211	PF02811	PHP domain
YPO2212	PF01300	Telomere recombination
YPO2213	PF00849	RNA pseudouridylate synthase
YPO2213	PF01479	S4 domain
YPO2214	PF02572	ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
YPO2214	PF12557	Cob(I)alamin adenosyltransferase N terminal
YPO2215	PF00106	short chain dehydrogenase
YPO2216	PF01343	Peptidase family S49
YPO2216	PF08496	YPO2216
YPO2217	PF10692	Protein of unknown function (DUF2498)
YPO2218	PF01131	DNA topoisomerase
YPO2218	PF01396	YPO2218
YPO2218	PF01751	Toprim domain
YPO2218	PF08272	Topoisomerase I zinc-ribbon-like
YPO2219	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
YPO2219	PF03466	LysR substrate binding domain
YPO2221	PF00330	Aconitase family (aconitate hydratase)
YPO2221	PF00694	Aconitase C-terminal domain
YPO2222	PF00925	GTP cyclohydrolase II
YPO2223	PF01569	PAP2 superfamily
YPO2224	PF06305	YPO2224
YPO2225	PF13176	Tetratricopeptide repeat
YPO2225	PF14559	Tetratricopeptide repeat
YPO2227	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
YPO2228	PF01253	Translation initiation factor SUI1
YPO2229	PF05433	YPO2229
YPO2230	PF00596	Class II Aldolase and Adducin N-terminal domain
YPO2231	PF09932	YPO2231
YPO2232	PF00923	Transaldolase
YPO2233	PF04328	YPO2233
YPO2234	PF02554	YPO2234
YPO2234	PF13722	YPO2234
YPO2235	PF00575	S1 RNA binding domain
YPO2235	PF00773	RNB domain
YPO2235	PF08206	Ribonuclease B OB domain
YPO2237	PF07690	Major Facilitator Superfamily
YPO2238	PF01370	NAD dependent epimerase/dehydratase family
YPO2239	PF00633	Helix-hairpin-helix motif
YPO2239	PF00730	HhH-GPD superfamily base excision DNA repair protein
YPO2239	PF10576	Iron-sulfur binding domain of endonuclease III
YPO2240	PF02508	YPO2240
YPO2241	PF04205	FMN-binding domain
YPO2242	PF03116	YPO2242
YPO2243	PF06445	GyrI-like small molecule binding domain
YPO2243	PF12833	Helix-turn-helix domain
YPO2244	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
YPO2244	PF10531	SLBB domain
YPO2244	PF13237	4Fe-4S dicluster domain
YPO2244	PF13375	RnfC Barrel sandwich hybrid domain
YPO2245	PF04060	Putative Fe-S cluster
YPO2245	PF14697	4Fe-4S dicluster domain
YPO2246	PF02508	YPO2246
YPO2247	PF10754	YPO2247
YPO2252	PF00005	ABC transporter
YPO2252	PF00664	ABC transporter transmembrane region
YPO2252	PF03412	Peptidase C39 family
YPO2253	PF02610	L-arabinose isomerase
YPO2253	PF11762	L-arabinose isomerase C-terminal domain
YPO2254	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
YPO2254	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
YPO2255	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
YPO2256	PF00005	ABC transporter
YPO2257	PF02653	YPO2257
YPO2258	PF02311	AraC-like ligand binding domain
YPO2258	PF12833	Helix-turn-helix domain
YPO2259	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
YPO2259	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
YPO2260	PF13593	SBF-like CPA transporter family (DUF4137)
YPO2262	PF06097	YPO2262
YPO2263	PF01238	Phosphomannose isomerase type I
YPO2263a	PF00206	Lyase
YPO2263a	PF10415	Fumarase C C-terminus
YPO2265	PF05472	DNA replication terminus site-binding protein (Ter protein)
YPO2266	PF07690	Major Facilitator Superfamily
YPO2268	PF00480	ROK family
YPO2269	PF13500	AAA domain
YPO2270	PF00654	Voltage gated chloride channel
YPO2273	PF01381	Helix-turn-helix
YPO2274	PF05144	YPO2274
YPO2274	PF05155	YPO2274
YPO2278	PF10734	YPO2278
YPO2279	PF05707	Zonular occludens toxin (Zot)
YPO2280	PF00263	YPO2280
YPO2283	PF00356	Bacterial regulatory proteins, lacI family
YPO2283	PF13377	Periplasmic binding protein-like domain
YPO2286	PF13379	NMT1-like family
YPO2287	PF00528	Binding-protein-dependent transport system inner membrane component
YPO2288	PF01048	Phosphorylase superfamily
YPO2288	PF10423	Bacterial AMP nucleoside phosphorylase N-terminus
YPO2290	PF07520	YPO2290
YPO2291	PF10139	YPO2291
YPO2292	PF07313	Protein of unknown function (DUF1460)
YPO2293	PF00205	Thiamine pyrophosphate enzyme, central domain
YPO2293	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
YPO2293	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
YPO2294	PF13710	ACT domain
YPO2295	PF13419	Haloacid dehalogenase-like hydrolase
YPO2298	PF00245	Alkaline phosphatase
YPO2299	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
YPO2299	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
YPO2300	PF00027	Cyclic nucleotide-binding domain
YPO2300	PF13545	Crp-like helix-turn-helix domain
YPO2301	PF00582	Universal stress protein family
YPO2302	PF02233	NAD(P) transhydrogenase beta subunit
YPO2303	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
YPO2303	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
YPO2303	PF12769	Domain of unknown function (DUF3814)
YPO2305	PF07338	Protein of unknown function (DUF1471)
YPO2306	PF13520	Amino acid permease
YPO2308	PF00072	Response regulator receiver domain
YPO2308	PF00486	Transcriptional regulatory protein, C terminal
YPO2309	PF00512	His Kinase A (phospho-acceptor) domain
YPO2309	PF00672	HAMP domain
YPO2309	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YPO2310	PF02074	Carboxypeptidase Taq (M32) metallopeptidase
YPO2311	PF01797	Transposase IS200 like
YPO2312	PF03497	Anthrax toxin LF subunit
YPO2315	PF04264	YceI-like domain
YPO2316	PF01292	Prokaryotic cytochrome b561
YPO2319	PF00089	Trypsin
YPO2320	PF01381	Helix-turn-helix
YPO2321	PF05973	YPO2321
YPO2322	PF00270	DEAD/DEAH box helicase
YPO2322	PF00271	Helicase conserved C-terminal domain
YPO2322	PF04408	Helicase associated domain (HA2)
YPO2322	PF07717	Oligonucleotide/oligosaccharide-binding (OB)-fold
YPO2322	PF11898	YPO2322
YPO2323	PF02525	Flavodoxin-like fold
YPO2324	PF04198	Putative sugar-binding domain
YPO2324	PF13384	Homeodomain-like domain
YPO2325	PF01232	Mannitol dehydrogenase Rossmann domain
YPO2325	PF08125	Mannitol dehydrogenase C-terminal domain
YPO2326	PF07027	YPO2326
YPO2327	PF13617	YPO2327
YPO2328	PF11739	YPO2328
YPO2329	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
YPO2329	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
YPO2330	PF03724	META domain
YPO2331	PF03891	YPO2331
YPO2332	PF02308	YPO2332
YPO2333	PF00893	Small Multidrug Resistance protein
YPO2334	PF01558	Pyruvate ferredoxin/flavodoxin oxidoreductase
YPO2334	PF01855	Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
YPO2334	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
YPO2334	PF10371	Domain of unknown function
YPO2334	PF12838	4Fe-4S dicluster domain
YPO2334	PF17147	YPO2334
YPO2335	PF01171	PP-loop family
YPO2336	PF07859	alpha/beta hydrolase fold
YPO2337	PF13411	MerR HTH family regulatory protein
YPO2338	PF01544	CorA-like Mg2+ transporter protein
YPO2339	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
YPO2340	PF00246	Zinc carboxypeptidase
YPO2341	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
YPO2341	PF13378	Enolase C-terminal domain-like
YPO2342	PF08534	Redoxin
YPO2343	PF01797	Transposase IS200 like
YPO2344	PF00158	Sigma-54 interaction domain
YPO2344	PF00989	PAS fold
YPO2345	PF09722	YPO2345
YPO2346	PF08808	YPO2346
YPO2347	PF05128	YPO2347
YPO2348	PF04317	YPO2348
YPO2349	PF04024	YPO2349
YPO2350	PF06667	YPO2350
YPO2351	PF04012	YPO2351
YPO2352	PF00158	Sigma-54 interaction domain
YPO2352	PF02954	Bacterial regulatory protein, Fis family
YPO2353	PF01797	Transposase IS200 like
YPO2355	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
YPO2356	PF00528	Binding-protein-dependent transport system inner membrane component
YPO2357	PF00528	Binding-protein-dependent transport system inner membrane component
YPO2357	PF12911	YPO2357
YPO2358	PF00005	ABC transporter
YPO2358	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
YPO2359	PF00005	ABC transporter
YPO2361	PF00854	POT family
YPO2362	PF06930	YPO2362
YPO2363	PF11656	YPO2363
YPO2364	PF01695	IstB-like ATP binding protein
YPO2365	PF00665	Integrase core domain
YPO2365	PF02796	Helix-turn-helix domain of resolvase
YPO2367	PF00043	Glutathione S-transferase, C-terminal domain
YPO2367	PF02798	Glutathione S-transferase, N-terminal domain
YPO2368	PF08543	Phosphomethylpyrimidine kinase
YPO2369	PF00579	tRNA synthetases class I (W and Y)
YPO2369	PF01479	S4 domain
YPO2370	PF01243	Pyridoxamine 5'-phosphate oxidase
YPO2370	PF10590	Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region
YPO2371	PF09864	Membrane-bound lysozyme-inhibitor of c-type lysozyme
YPO2372	PF03702	Uncharacterised protein family (UPF0075)
YPO2373	PF05433	YPO2373
YPO2374	PF01047	MarR family
YPO2375	PF00248	Aldo/keto reductase family
YPO2376	PF06945	YPO2376
YPO2377	PF00884	Sulfatase
YPO2377	PF08019	YPO2377
YPO2378	PF00440	Bacterial regulatory proteins, tetR family
YPO2378	PF16925	YPO2378
YPO2379	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
YPO2381	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YPO2382	PF00929	Exonuclease
YPO2383	PF00462	Glutaredoxin
YPO2385	PF00877	NlpC/P60 family
YPO2386	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
YPO2386	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
YPO2387	PF00356	Bacterial regulatory proteins, lacI family
YPO2387	PF13377	Periplasmic binding protein-like domain
YPO2388	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
YPO2388	PF03466	LysR substrate binding domain
YPO2389	PF07690	Major Facilitator Superfamily
YPO2390	PF02353	Mycolic acid cyclopropane synthetase
YPO2391	PF00677	Lumazine binding domain
YPO2392	PF01554	MatE
YPO2393	PF00224	Pyruvate kinase, barrel domain
YPO2393	PF02887	Pyruvate kinase, alpha/beta domain
YPO2394	PF04728	Lipoprotein leucine-zipper
YPO2395	PF01797	Transposase IS200 like
YPO2396	PF00665	Integrase core domain
YPO2396	PF02796	Helix-turn-helix domain of resolvase
YPO2397	PF01695	IstB-like ATP binding protein
YPO2398	PF03734	L,D-transpeptidase catalytic domain
YPO2399	PF02657	Fe-S metabolism associated domain
YPO2400	PF00266	Aminotransferase class-V
YPO2401	PF01458	Uncharacterized protein family (UPF0051)
YPO2402	PF00005	ABC transporter
YPO2403	PF01458	Uncharacterized protein family (UPF0051)
YPO2404	PF01521	Iron-sulphur cluster biosynthesis
YPO2406	PF03061	Thioesterase superfamily
YPO2407	PF01565	FAD binding domain
YPO2407	PF02913	FAD linked oxidases, C-terminal domain
YPO2407	PF13183	4Fe-4S dicluster domain
YPO2408	PF01594	YPO2408
YPO2409	PF00391	PEP-utilising enzyme, mobile domain
YPO2409	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
YPO2409	PF02896	PEP-utilising enzyme, TIM barrel domain
YPO2410	PF03618	YPO2410
YPO2411	PF00793	DAHP synthetase I family
YPO2414	PF03099	Biotin/lipoate A/B protein ligase family
YPO2414	PF10437	Bacterial lipoate protein ligase C-terminus
YPO2415	PF00877	NlpC/P60 family
YPO2417	PF00892	EamA-like transporter family
YPO2418	PF02366	YPO2418
YPO2419	PF01522	Polysaccharide deacetylase
YPO2420	PF00551	Formyl transferase
YPO2420	PF01370	NAD dependent epimerase/dehydratase family
YPO2420	PF02911	Formyl transferase, C-terminal domain
YPO2421	PF00535	Glycosyl transferase family 2
YPO2422	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
YPO2423	PF00005	ABC transporter
YPO2424	PF00255	Glutathione peroxidase
YPO2425	PF01032	FecCD transport family
YPO2426	PF10697	YPO2426
YPO2427	PF00216	Bacterial DNA-binding protein
YPO2428	PF01588	Putative tRNA binding domain
YPO2428	PF03147	Ferredoxin-fold anticodon binding domain
YPO2428	PF03483	B3/4 domain
YPO2428	PF03484	tRNA synthetase B5 domain
YPO2429	PF01409	tRNA synthetases class II core domain (F)
YPO2429	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
YPO2430	PF00453	Ribosomal protein L20
YPO2431	PF01632	Ribosomal protein L35
YPO2432	PF00707	Translation initiation factor IF-3, C-terminal domain
YPO2432	PF05198	Translation initiation factor IF-3, N-terminal domain
YPO2433	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
YPO2433	PF02824	TGS domain
YPO2433	PF03129	Anticodon binding domain
YPO2433	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
YPO2434	PF13619	YPO2434
YPO2437	PF01914	YPO2437
YPO2438	PF01464	Transglycosylase SLT domain
YPO2439	PF01297	Periplasmic solute binding protein family
YPO2440	PF00005	ABC transporter
YPO2441	PF00950	YPO2441
YPO2442	PF00950	YPO2442
YPO2444	PF03881	Fructosamine kinase
YPO2445	PF14002	YPO2445
YPO2446	PF13419	Haloacid dehalogenase-like hydrolase
YPO2447	PF00872	YPO2447
YPO2448	PF01266	FAD dependent oxidoreductase
YPO2449	PF00196	Bacterial regulatory proteins, luxR family
YPO2450	PF01594	YPO2450
YPO2451	PF00581	Rhodanese-like domain
YPO2451	PF12368	YPO2451
YPO2455	PF00892	EamA-like transporter family
YPO2456	PF00765	Autoinducer synthetase
YPO2457	PF00196	Bacterial regulatory proteins, luxR family
YPO2457	PF03472	Autoinducer binding domain
YPO2458	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
YPO2458	PF03466	LysR substrate binding domain
YPO2459	PF00083	Sugar (and other) transporter
YPO2460	PF08714	Formaldehyde-activating enzyme (Fae)
YPO2461	PF00248	Aldo/keto reductase family
YPO2462	PF09618	CRISPR-associated protein (Cas_Csy4)
YPO2463	PF09615	YPO2463
YPO2464	PF09614	YPO2464
YPO2465	PF09611	YPO2465
YPO2468	PF01867	CRISPR associated protein Cas1
YPO2470	PF00924	Mechanosensitive ion channel
YPO2473	PF08950	Protein of unknown function (DUF1861)
YPO2474	PF04041	Domain of unknown function (DUF377)
YPO2475	PF00528	Binding-protein-dependent transport system inner membrane component
YPO2476	PF00528	Binding-protein-dependent transport system inner membrane component
YPO2477	PF13416	Bacterial extracellular solute-binding protein
YPO2478	PF00356	Bacterial regulatory proteins, lacI family
YPO2478	PF13377	Periplasmic binding protein-like domain
YPO2479	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
YPO2479	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
YPO2479	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
YPO2479	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
YPO2480	PF00005	ABC transporter
YPO2480	PF08402	TOBE domain
YPO2483	PF14106	YPO2483
YPO2486	PF04829	YPO2486
YPO2489	PF10004	YPO2489
YPO2490	PF04829	YPO2490
YPO2490	PF05594	YPO2490
YPO2490	PF05860	haemagglutination activity domain
YPO2490	PF13018	YPO2490
YPO2490	PF13332	YPO2490
YPO2491	PF03865	Haemolysin secretion/activation protein ShlB/FhaC/HecB
YPO2491	PF08479	POTRA domain, ShlB-type
YPO2492	PF00111	2Fe-2S iron-sulfur cluster binding domain
YPO2492	PF00175	Oxidoreductase NAD-binding domain
YPO2492	PF00970	Oxidoreductase FAD-binding domain
YPO2493	PF00355	Rieske [2Fe-2S] domain
YPO2493	PF00848	Ring hydroxylating alpha subunit (catalytic domain)
YPO2494	PF02028	BCCT family transporter
YPO2496	PF00180	Isocitrate/isopropylmalate dehydrogenase
YPO2497	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
YPO2497	PF03466	LysR substrate binding domain
YPO2498	PF00356	Bacterial regulatory proteins, lacI family
YPO2498	PF13407	Periplasmic binding protein domain
YPO2499	PF02653	YPO2499
YPO2500	PF00005	ABC transporter
YPO2501	PF13407	Periplasmic binding protein domain
YPO2502	PF00107	Zinc-binding dehydrogenase
YPO2502	PF08240	Alcohol dehydrogenase GroES-like domain
YPO2503	PF16809	YPO2503
YPO2504	PF16809	YPO2504
YPO2505	PF01545	Cation efflux family
YPO2506	PF13505	Outer membrane protein beta-barrel domain
YPO2507	PF00892	EamA-like transporter family
YPO2508	PF13673	Acetyltransferase (GNAT) domain
YPO2509	PF13649	Methyltransferase domain
YPO2510	PF00210	Ferritin-like domain
YPO2511	PF02698	DUF218 domain
YPO2512	PF00497	Bacterial extracellular solute-binding proteins, family 3
YPO2513	PF00528	Binding-protein-dependent transport system inner membrane component
YPO2514	PF00005	ABC transporter
YPO2515	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
YPO2515	PF08448	PAS fold
YPO2515	PF13426	PAS domain
YPO2516	PF00665	Integrase core domain
YPO2516	PF02796	Helix-turn-helix domain of resolvase
YPO2517	PF01695	IstB-like ATP binding protein
YPO2519	PF05971	Protein of unknown function (DUF890)
YPO2521	PF07338	Protein of unknown function (DUF1471)
YPO2522	PF00591	Glycosyl transferase family, a/b domain
YPO2522	PF02885	Glycosyl transferase family, helical bundle domain
YPO2523	PF00501	AMP-binding enzyme
YPO2524	PF13378	Enolase C-terminal domain-like
YPO2525	PF00378	Enoyl-CoA hydratase/isomerase family
YPO2526	PF12697	Alpha/beta hydrolase family
YPO2527	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
YPO2527	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
YPO2527	PF16582	YPO2527
YPO2528	PF00425	chorismate binding enzyme
YPO2531	PF05957	YPO2531
YPO2533	PF00920	Dehydratase family
YPO2534	PF03928	Domain of unknown function (DUF336)
YPO2535	PF07690	Major Facilitator Superfamily
YPO2536	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
YPO2536	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
YPO2537	PF00356	Bacterial regulatory proteins, lacI family
YPO2537	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
YPO2538	PF02638	YPO2538
YPO2539	PF00106	short chain dehydrogenase
YPO2540	PF01202	Shikimate kinase
YPO2541	PF04074	Domain of unknown function (DUF386)
YPO2543	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
YPO2544	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
YPO2545	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
YPO2545	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
YPO2546	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
YPO2547	PF00499	NADH-ubiquinone/plastoquinone oxidoreductase chain 6
YPO2548	PF12838	4Fe-4S dicluster domain
YPO2549	PF00146	NADH dehydrogenase
YPO2550	PF00384	Molybdopterin oxidoreductase
YPO2550	PF01568	Molydopterin dinucleotide binding domain
YPO2550	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
YPO2550	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
YPO2550	PF13510	2Fe-2S iron-sulfur cluster binding domain
YPO2551	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
YPO2551	PF10589	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
YPO2552	PF01257	Thioredoxin-like [2Fe-2S] ferredoxin
YPO2553	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
YPO2553	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
YPO2554	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
YPO2555	PF00507	NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
YPO2556	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
YPO2556	PF03466	LysR substrate binding domain
YPO2558	PF00155	Aminotransferase class I and II
YPO2559	PF13023	HD domain
YPO2561	PF02080	TrkA-C domain
YPO2561	PF03600	Citrate transporter
YPO2562	PF13419	Haloacid dehalogenase-like hydrolase
YPO2563	PF03887	YfbU domain
YPO2564	PF04217	YPO2564
YPO2566	PF00871	Acetokinase family
YPO2567	PF01515	Phosphate acetyl/butaryl transferase
YPO2567	PF07085	DRTGG domain
YPO2567	PF13500	AAA domain
YPO2568	PF00356	Bacterial regulatory proteins, lacI family
YPO2568	PF13377	Periplasmic binding protein-like domain
YPO2569	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
YPO2569a	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
YPO2571	PF00872	YPO2571
YPO2572	PF00912	Transglycosylase
YPO2573	PF00207	Alpha-2-macroglobulin family
YPO2573	PF01835	MG2 domain
YPO2573	PF07703	Alpha-2-macroglobulin family N-terminal region
YPO2573	PF11974	Alpha-2-macroglobulin MG1 domain
YPO2574	PF07274	YPO2574
YPO2576	PF01380	SIS domain
YPO2576	PF01418	Helix-turn-helix domain, rpiR family
YPO2577	PF00171	Aldehyde dehydrogenase family
YPO2578	PF00205	Thiamine pyrophosphate enzyme, central domain
YPO2578	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
YPO2578	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
YPO2581	PF13407	Periplasmic binding protein domain
YPO2582	PF00005	ABC transporter
YPO2583	PF02653	YPO2583
YPO2584	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
YPO2584	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
YPO2585	PF00294	pfkB family carbohydrate kinase
YPO2585	PF09863	Uncharacterized protein conserved in bacteria (DUF2090)
YPO2586	PF01261	Xylose isomerase-like TIM barrel
YPO2587	PF04962	KduI/IolB family
YPO2588	PF00005	ABC transporter
YPO2588	PF00664	ABC transporter transmembrane region
YPO2589	PF03992	Antibiotic biosynthesis monooxygenase
YPO2590	PF08971	Glycogen synthesis protein
YPO2593	PF00196	Bacterial regulatory proteins, luxR family
YPO2595	PF00313	'Cold-shock' DNA-binding domain
YPO2596	PF02537	YPO2596
YPO2597	PF02416	mttA/Hcf106 family
YPO2598	PF04055	Radical SAM superfamily
YPO2598	PF16881	YPO2598
YPO2599	PF03099	Biotin/lipoate A/B protein ligase family
YPO2600	PF04359	Protein of unknown function (DUF493)
YPO2601	PF00768	D-alanyl-D-alanine carboxypeptidase
YPO2601	PF07943	Penicillin-binding protein 5, C-terminal domain
YPO2602	PF03330	Rare lipoprotein A (RlpA)-like double-psi beta-barrel
YPO2602	PF05036	Sporulation related domain
YPO2603	PF01098	YPO2603
YPO2604	PF00905	Penicillin binding protein transpeptidase domain
YPO2604	PF03717	Penicillin-binding Protein dimerisation domain
YPO2605	PF02590	Predicted SPOUT methyltransferase
YPO2606	PF02410	Oligomerisation domain
YPO2607	PF01467	Cytidylyltransferase
YPO2608	PF06144	DNA polymerase III, delta subunit
YPO2608	PF14840	Processivity clamp loader gamma complex DNA pol III C-term
YPO2609	PF04390	Lipopolysaccharide-assembly
YPO2610	PF00133	tRNA synthetases class I (I, L, M and V)
YPO2610	PF08264	Anticodon-binding domain of tRNA
YPO2610	PF13603	Leucyl-tRNA synthetase, Domain 2
YPO2611	PF07295	YPO2611
YPO2612	PF00005	ABC transporter
YPO2613	PF00528	Binding-protein-dependent transport system inner membrane component
YPO2614	PF00528	Binding-protein-dependent transport system inner membrane component
YPO2615	PF00497	Bacterial extracellular solute-binding proteins, family 3
YPO2616	PF00795	Carbon-nitrogen hydrolase
YPO2617	PF00571	CBS domain
YPO2617	PF03471	Transporter associated domain
YPO2618	PF02130	Uncharacterized protein family UPF0054
YPO2619	PF02562	PhoH-like protein
YPO2620	PF00919	Uncharacterized protein family UPF0004
YPO2620	PF01938	TRAM domain
YPO2620	PF04055	Radical SAM superfamily
YPO2621	PF01494	FAD binding domain
YPO2623	PF00733	Asparagine synthase
YPO2623	PF13537	Glutamine amidotransferase domain
YPO2624	PF13242	HAD-hyrolase-like
YPO2624	PF13344	Haloacid dehalogenase-like hydrolase
YPO2625	PF00480	ROK family
YPO2625	PF01047	MarR family
YPO2626	PF01979	Amidohydrolase family
YPO2627	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
YPO2628	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
YPO2628	PF00367	phosphotransferase system, EIIB
YPO2628	PF02378	Phosphotransferase system, EIIC
YPO2629	PF01797	Transposase IS200 like
YPO2630	PF00749	tRNA synthetases class I (E and Q), catalytic domain
YPO2630	PF03950	tRNA synthetases class I (E and Q), anti-codon binding domain
YPO2631	PF03573	outer membrane porin, OprD family
YPO2634	PF01475	Ferric uptake regulator family
YPO2635	PF00258	Flavodoxin
YPO2637	PF01402	Ribbon-helix-helix protein, copG family
YPO2638	PF12697	Alpha/beta hydrolase family
YPO2640	PF01527	Transposase
YPO2642	PF01695	IstB-like ATP binding protein
YPO2643	PF00665	Integrase core domain
YPO2643	PF02796	Helix-turn-helix domain of resolvase
YPO2644	PF01522	Polysaccharide deacetylase
YPO2645	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
YPO2646	PF00528	Binding-protein-dependent transport system inner membrane component
YPO2647	PF00005	ABC transporter
YPO2647	PF00571	CBS domain
YPO2648	PF00268	Ribonucleotide reductase, small chain
YPO2649	PF00317	Ribonucleotide reductase, all-alpha domain
YPO2649	PF02867	Ribonucleotide reductase, barrel domain
YPO2649	PF08343	Ribonucleotide reductase N-terminal
YPO2650	PF07972	NrdI Flavodoxin like
YPO2651	PF00462	Glutaredoxin
YPO2652	PF06392	YPO2652
YPO2653	PF09400	Protein of unknown function (DUF2002)
YPO2654	PF06711	YPO2654
YPO2656	PF00872	YPO2656
YPO2657	PF04899	YPO2657
YPO2659	PF00313	'Cold-shock' DNA-binding domain
YPO2660	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
YPO2661	PF00528	Binding-protein-dependent transport system inner membrane component
YPO2662	PF00528	Binding-protein-dependent transport system inner membrane component
YPO2663	PF00005	ABC transporter
YPO2664	PF00005	ABC transporter
YPO2665	PF00547	Urease, gamma subunit
YPO2666	PF00699	Urease beta subunit
YPO2667	PF00449	Urease alpha-subunit, N-terminal domain
YPO2667	PF01979	Amidohydrolase family
YPO2668	PF02814	UreE urease accessory protein, N-terminal domain
YPO2668	PF05194	UreE urease accessory protein, C-terminal domain
YPO2669	PF01730	UreF
YPO2670	PF02492	CobW/HypB/UreG, nucleotide-binding domain
YPO2672	PF03253	Urea transporter
YPO2673	PF03824	YPO2673
YPO2674	PF06411	HdeA/HdeB family
YPO2675	PF02254	TrkA-N domain
YPO2675	PF07885	Ion channel
YPO2676	PF02537	YPO2676
YPO2677	PF02537	YPO2677
YPO2678	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
YPO2679	PF02378	Phosphotransferase system, EIIC
YPO2680	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
YPO2681	PF07883	Cupin domain
YPO2681	PF12833	Helix-turn-helix domain
YPO2682	PF04794	YdjC-like protein
YPO2685	PF03925	SeqA protein
YPO2686	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
YPO2686	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
YPO2686	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
YPO2686	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
YPO2687	PF00892	EamA-like transporter family
YPO2688	PF00072	Response regulator receiver domain
YPO2688	PF00486	Transcriptional regulatory protein, C terminal
YPO2689	PF00512	His Kinase A (phospho-acceptor) domain
YPO2689	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YPO2689	PF02702	Osmosensitive K+ channel His kinase sensor domain
YPO2689	PF13492	GAF domain
YPO2689	PF13493	Domain of unknown function (DUF4118)
YPO2690	PF02669	YPO2690
YPO2691	PF00122	E1-E2 ATPase
YPO2691	PF00702	haloacid dehalogenase-like hydrolase
YPO2692	PF03814	YPO2692
YPO2693	PF10725	YPO2693
YPO2694	PF08349	YPO2694
YPO2695	PF00875	DNA photolyase
YPO2695	PF03441	FAD binding domain of DNA photolyase
YPO2696	PF02112	YPO2696
YPO2697	PF01784	NIF3 (NGG1p interacting factor 3)
YPO2699	PF02626	Allophanate hydrolase subunit 2
YPO2700	PF03746	LamB/YcsF family
YPO2701	PF06149	YPO2701
YPO2702	PF06166	YPO2702
YPO2703	PF01470	Pyroglutamyl peptidase
YPO2704	PF03167	Uracil DNA glycosylase superfamily
YPO2705	PF01228	Glycine radical
YPO2706	PF11187	Protein of unknown function (DUF2974)
YPO2708	PF00270	DEAD/DEAH box helicase
YPO2708	PF00271	Helicase conserved C-terminal domain
YPO2709	PF05175	Methyltransferase small domain
YPO2710	PF00890	FAD binding domain
YPO2710	PF02910	Fumarate reductase flavoprotein C-term
YPO2711	PF04542	Sigma-70 region 2
YPO2711	PF08281	Sigma-70, region 4
YPO2712	PF03872	Anti sigma-E protein RseA, N-terminal domain
YPO2712	PF03873	Anti sigma-E protein RseA, C-terminal domain
YPO2713	PF03888	MucB/RseB family
YPO2713	PF17188	YPO2713
YPO2714	PF04246	YPO2714
YPO2716	PF00009	Elongation factor Tu GTP binding domain
YPO2716	PF00679	Elongation factor G C-terminus
YPO2716	PF03144	Elongation factor Tu domain 2
YPO2716	PF06421	GTP-binding protein LepA C-terminus
YPO2717	PF00717	Peptidase S24-like
YPO2717	PF10502	Signal peptidase, peptidase S26
YPO2718	PF00035	Double-stranded RNA binding motif
YPO2718	PF14622	Ribonuclease-III-like
YPO2719	PF01926	50S ribosome-binding GTPase
YPO2719	PF07650	KH domain
YPO2720	PF02565	Recombination protein O C terminal
YPO2720	PF11967	Recombination protein O N terminal
YPO2721	PF00665	Integrase core domain
YPO2721	PF02796	Helix-turn-helix domain of resolvase
YPO2722	PF01695	IstB-like ATP binding protein
YPO2724	PF06744	YPO2724
YPO2724	PF06761	YPO2724
YPO2724	PF14331	YPO2724
YPO2725	PF05954	Phage late control gene D protein (GPD)
YPO2727	PF07024	ImpE protein
YPO2728	PF04965	Gene 25-like lysozyme
YPO2730	PF03831	PhnA protein
YPO2730	PF08274	PhnA Zinc-Ribbon
YPO2731	PF09972	YPO2731
YPO2732	PF04011	LemA family
YPO2734	PF00005	ABC transporter
YPO2735	PF03379	YPO2735
YPO2736	PF01578	YPO2736
YPO2737	PF04995	YPO2737
YPO2738	PF03100	CcmE
YPO2739	PF01578	YPO2739
YPO2739	PF16327	YPO2739
YPO2740	PF08534	Redoxin
YPO2741	PF03918	Cytochrome C biogenesis protein
YPO2743	PF04333	YPO2743
YPO2744	PF03349	Outer membrane protein transport protein (OMPP1/FadL/TodX)
YPO2745	PF04175	Protein of unknown function (DUF406)
YPO2746	PF00108	Thiolase, N-terminal domain
YPO2746	PF02803	Thiolase, C-terminal domain
YPO2747	PF00378	Enoyl-CoA hydratase/isomerase family
YPO2747	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
YPO2747	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
YPO2748	PF00300	Histidine phosphatase superfamily (branch 1)
YPO2749	PF01713	Smr domain
YPO2750	PF05175	Methyltransferase small domain
YPO2751	PF01264	Chorismate synthase
YPO2752	PF03411	Penicillin-insensitive murein endopeptidase
YPO2753	PF01925	YPO2753
YPO2754	PF04315	YPO2754
YPO2755	PF08891	YPO2755
YPO2756	PF01266	FAD dependent oxidoreductase
YPO2756	PF05430	S-adenosyl-L-methionine-dependent methyltransferase
YPO2757	PF00109	Beta-ketoacyl synthase, N-terminal domain
YPO2757	PF02801	Beta-ketoacyl synthase, C-terminal domain
YPO2758	PF01177	Asp/Glu/Hydantoin racemase
YPO2759	PF00419	Fimbrial protein
YPO2761	PF00892	EamA-like transporter family
YPO2762	PF02311	AraC-like ligand binding domain
YPO2762	PF12833	Helix-turn-helix domain
YPO2763	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
YPO2763	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
YPO2763	PF11890	Domain of unknown function (DUF3410)
YPO2764	PF01797	Transposase IS200 like
YPO2765	PF01118	Semialdehyde dehydrogenase, NAD binding domain
YPO2765	PF02774	Semialdehyde dehydrogenase, dimerisation domain
YPO2766	PF01416	tRNA pseudouridine synthase
YPO2767	PF09335	YPO2767
YPO2768	PF01039	Carboxyl transferase domain
YPO2769	PF02875	Mur ligase family, glutamate ligase domain
YPO2769	PF08245	Mur ligase middle domain
YPO2770	PF05036	Sporulation related domain
YPO2771	PF02674	YPO2771
YPO2772	PF00156	Phosphoribosyl transferase domain
YPO2772	PF13522	Glutamine amidotransferase domain
YPO2773	PF02441	Flavoprotein
YPO2774	PF00497	Bacterial extracellular solute-binding proteins, family 3
YPO2775	PF00528	Binding-protein-dependent transport system inner membrane component
YPO2776	PF00528	Binding-protein-dependent transport system inner membrane component
YPO2777	PF00005	ABC transporter
YPO2778	PF01370	NAD dependent epimerase/dehydratase family
YPO2778	PF08338	Domain of unknown function (DUF1731)
YPO2779	PF00563	EAL domain
YPO2780	PF12850	Calcineurin-like phosphoesterase superfamily domain
YPO2781	PF00293	NUDIX domain
YPO2782	PF03611	YPO2782
YPO2783	PF00872	YPO2783
YPO2784	PF00905	Penicillin binding protein transpeptidase domain
YPO2784	PF06832	YPO2784
YPO2785	PF13693	Winged helix-turn-helix DNA-binding
YPO2790	PF06836	YPO2790
YPO2792	PF06836	YPO2792
YPO2793	PF05638	Protein of unknown function (DUF796)
YPO2796	PF03212	Pertactin
YPO2796	PF03797	Autotransporter beta-domain
YPO2797	PF11459	YPO2797
YPO2797	PF17194	YPO2797
YPO2799	PF00872	YPO2799
YPO2801	PF09925	YPO2801
YPO2801	PF14351	YPO2801
YPO2802	PF14345	YPO2802
YPO2803	PF00933	Glycosyl hydrolase family 3 N terminal domain
YPO2803	PF01915	Glycosyl hydrolase family 3 C-terminal domain
YPO2803	PF14310	Fibronectin type III-like domain
YPO2805	PF00248	Aldo/keto reductase family
YPO2806	PF00248	Aldo/keto reductase family
YPO2807	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
YPO2807	PF03466	LysR substrate binding domain
YPO2808	PF00665	Integrase core domain
YPO2808	PF02796	Helix-turn-helix domain of resolvase
YPO2809	PF01695	IstB-like ATP binding protein
YPO2813	PF00782	Dual specificity phosphatase, catalytic domain
YPO2813	PF14378	YPO2813
YPO2814	PF12146	Putative lysophospholipase
YPO2814	PF12147	YPO2814
YPO2815	PF01553	Acyltransferase
YPO2816	PF01148	Cytidylyltransferase family
YPO2817	PF01066	CDP-alcohol phosphatidyltransferase
YPO2823	PF05930	Prophage CP4-57 regulatory protein (AlpA)
YPO2824	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
YPO2824	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
YPO2825	PF13275	S4 domain
YPO2826	PF01797	Transposase IS200 like
YPO2827	PF14681	Uracil phosphoribosyltransferase
YPO2828	PF00586	AIR synthase related protein, N-terminal domain
YPO2828	PF02769	AIR synthase related protein, C-terminal domain
YPO2829	PF00551	Formyl transferase
YPO2830	PF13302	Acetyltransferase (GNAT) domain
YPO2833	PF00005	ABC transporter
YPO2834	PF00528	Binding-protein-dependent transport system inner membrane component
YPO2835	PF00528	Binding-protein-dependent transport system inner membrane component
YPO2836	PF02503	Polyphosphate kinase middle domain
YPO2836	PF13089	Polyphosphate kinase N-terminal domain
YPO2836	PF13090	Polyphosphate kinase C-terminal domain
YPO2837	PF02541	Ppx/GppA phosphatase family
YPO2838	PF11119	YPO2838
YPO2839	PF00571	CBS domain
YPO2839	PF01769	Divalent cation transporter
YPO2839	PF03448	MgtE intracellular N domain
YPO2840	PF00012	Hsp70 protein
YPO2841	PF00528	Binding-protein-dependent transport system inner membrane component
YPO2842	PF00528	Binding-protein-dependent transport system inner membrane component
YPO2843	PF13416	Bacterial extracellular solute-binding protein
YPO2844	PF00202	Aminotransferase class-III
YPO2845	PF00155	Aminotransferase class I and II
YPO2845	PF00392	Bacterial regulatory proteins, gntR family
YPO2846	PF00005	ABC transporter
YPO2846	PF08402	TOBE domain
YPO2847	PF13437	HlyD family secretion protein
YPO2847	PF13533	Biotin-lipoyl like
YPO2848	PF00873	AcrB/AcrD/AcrF family
YPO2849	PF00873	AcrB/AcrD/AcrF family
YPO2850	PF07690	Major Facilitator Superfamily
YPO2853	PF00072	Response regulator receiver domain
YPO2853	PF00486	Transcriptional regulatory protein, C terminal
YPO2854	PF07411	Domain of unknown function (DUF1508)
YPO2855	PF01136	YPO2855
YPO2855	PF16325	YPO2855
YPO2856	PF00781	Diacylglycerol kinase catalytic domain
YPO2857	PF08816	Inhibitor of vertebrate lysozyme (Ivy)
YPO2859	PF08543	Phosphomethylpyrimidine kinase
YPO2860	PF06092	YPO2860
YPO2862	PF00872	YPO2862
YPO2864	PF06836	YPO2864
YPO2865	PF06836	YPO2865
YPO2866	PF06836	YPO2866
YPO2867	PF06836	YPO2867
YPO2868	PF05638	Protein of unknown function (DUF796)
YPO2869	PF01797	Transposase IS200 like
YPO2870	PF00117	Glutamine amidotransferase class-I
YPO2870	PF00958	GMP synthase C terminal domain
YPO2870	PF02540	NAD synthase
YPO2871	PF00478	IMP dehydrogenase / GMP reductase domain
YPO2871	PF00571	CBS domain
YPO2872	PF02601	YPO2872
YPO2872	PF13742	YPO2872
YPO2873	PF07191	zinc-ribbons
YPO2874	PF03547	YPO2874
YPO2875	PF01926	50S ribosome-binding GTPase
YPO2875	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
YPO2876	PF13360	PQQ-like domain
YPO2877	PF09976	Tetratricopeptide repeat
YPO2878	PF03129	Anticodon binding domain
YPO2878	PF13393	Histidyl-tRNA synthetase
YPO2879	PF04551	GcpE protein
YPO2880	PF13413	Helix-turn-helix domain
YPO2880	PF13464	YPO2880
YPO2881	PF13181	Tetratricopeptide repeat
YPO2881	PF13431	Tetratricopeptide repeat
YPO2882	PF04055	Radical SAM superfamily
YPO2883	PF00334	Nucleoside diphosphate kinase
YPO2884	PF00030	Beta/Gamma crystallin
YPO2884	PF08964	Beta/Gamma crystallin
YPO2884	PF09101	Exotoxin A binding
YPO2886	PF03212	Pertactin
YPO2886	PF03797	Autotransporter beta-domain
YPO2888	PF07179	YPO2888
YPO2888	PF14581	YPO2888
YPO2889	PF00883	Cytosol aminopeptidase family, catalytic domain
YPO2889	PF12404	YPO2889
YPO2890	PF04384	Iron-sulphur cluster assembly
YPO2891	PF00111	2Fe-2S iron-sulfur cluster binding domain
YPO2892	PF00012	Hsp70 protein
YPO2893	PF00226	DnaJ domain
YPO2893	PF07743	HSCB C-terminal oligomerisation domain
YPO2894	PF01521	Iron-sulphur cluster biosynthesis
YPO2895	PF01592	NifU-like N terminal domain
YPO2896	PF00266	Aminotransferase class-V
YPO2897	PF02082	Transcriptional regulator
YPO2898	PF00588	SpoU rRNA Methylase family
YPO2899	PF00459	Inositol monophosphatase family
YPO2900	PF01797	Transposase IS200 like
YPO2901	PF03824	YPO2901
YPO2902	PF06226	YPO2902
YPO2903	PF00874	PRD domain
YPO2904	PF12832	MFS_1 like family
YPO2905	PF13505	Outer membrane protein beta-barrel domain
YPO2907	PF00464	Serine hydroxymethyltransferase
YPO2908	PF00042	Globin
YPO2908	PF00175	Oxidoreductase NAD-binding domain
YPO2908	PF00970	Oxidoreductase FAD-binding domain
YPO2911	PF00543	Nitrogen regulatory protein P-II
YPO2912	PF00795	Carbon-nitrogen hydrolase
YPO2912	PF02540	NAD synthase
YPO2914	PF00072	Response regulator receiver domain
YPO2914	PF00158	Sigma-54 interaction domain
YPO2915	PF13942	YPO2915
YPO2916	PF00512	His Kinase A (phospho-acceptor) domain
YPO2916	PF00672	HAMP domain
YPO2916	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YPO2917	PF01797	Transposase IS200 like
YPO2921	PF02769	AIR synthase related protein, C-terminal domain
YPO2921	PF13507	CobB/CobQ-like glutamine amidotransferase domain
YPO2922	PF00497	Bacterial extracellular solute-binding proteins, family 3
YPO2922	PF01464	Transglycosylase SLT domain
YPO2923	PF14437	YPO2923
YPO2924	PF12710	haloacid dehalogenase-like hydrolase
YPO2925	PF01380	SIS domain
YPO2926	PF01380	SIS domain
YPO2926	PF01418	Helix-turn-helix domain, rpiR family
YPO2927	PF12838	4Fe-4S dicluster domain
YPO2928	PF01797	Transposase IS200 like
YPO2929	PF01648	4'-phosphopantetheinyl transferase superfamily
YPO2930	PF03740	Pyridoxal phosphate biosynthesis protein PdxJ
YPO2931	PF01695	IstB-like ATP binding protein
YPO2932	PF00665	Integrase core domain
YPO2932	PF02796	Helix-turn-helix domain of resolvase
YPO2933	PF09850	Uncharacterized protein conserved in bacteria (DUF2077)
YPO2934	PF05936	YPO2934
YPO2935	PF12790	Type VI secretion lipoprotein
YPO2937	PF05638	Protein of unknown function (DUF796)
YPO2938	PF05943	YPO2938
YPO2939	PF05591	YPO2939
YPO2940	PF00419	Fimbrial protein
YPO2942	PF00872	YPO2942
YPO2944	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
YPO2944	PF02753	Pili assembly chaperone PapD, C-terminal domain
YPO2945	PF16970	YPO2945
YPO2946	PF00004	ATPase family associated with various cellular activities (AAA)
YPO2946	PF02861	Clp amino terminal domain
YPO2946	PF07724	AAA domain (Cdc48 subfamily)
YPO2946	PF10431	C-terminal, D2-small domain, of ClpB protein
YPO2947	PF05947	YPO2947
YPO2948	PF06996	YPO2948
YPO2949	PF06812	YPO2949
YPO2950	PF00419	Fimbrial protein
YPO2951	PF11397	YPO2951
YPO2953	PF00691	OmpA family
YPO2954	PF08786	Domain of unknown function (DUF1795)
YPO2955	PF00196	Bacterial regulatory proteins, luxR family
YPO2957	PF13406	Transglycosylase SLT domain
YPO2958	PF13343	Bacterial extracellular solute-binding protein
YPO2959	PF00528	Binding-protein-dependent transport system inner membrane component
YPO2960	PF00005	ABC transporter
YPO2961	PF09900	YPO2961
YPO2962	PF05638	Protein of unknown function (DUF796)
YPO2963	PF13988	YPO2963
YPO2965	PF00384	Molybdopterin oxidoreductase
YPO2965	PF01568	Molydopterin dinucleotide binding domain
YPO2965	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
YPO2966	PF13247	4Fe-4S dicluster domain
YPO2967	PF04976	YPO2967
YPO2968	PF02613	Nitrate reductase delta subunit
YPO2969	PF00037	4Fe-4S binding domain
YPO2969	PF12838	4Fe-4S dicluster domain
YPO2970	PF05643	Putative bacterial lipoprotein (DUF799)
YPO2971	PF16068	YPO2971
YPO2972	PF03783	Curli production assembly/transport component CsgG
YPO2973	PF15970	YPO2973
YPO2974	PF01292	Prokaryotic cytochrome b561
YPO2975	PF00155	Aminotransferase class I and II
YPO2976	PF07350	Protein of unknown function (DUF1479)
YPO2977	PF02685	Glucokinase
YPO2978	PF05232	YPO2978
YPO2979	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
YPO2979	PF03466	LysR substrate binding domain
YPO2980	PF00248	Aldo/keto reductase family
YPO2981	PF10697	YPO2981
YPO2982	PF01566	YPO2982
YPO2983	PF01773	Na+ dependent nucleoside transporter N-terminus
YPO2983	PF07662	Na+ dependent nucleoside transporter C-terminus
YPO2983	PF07670	Nucleoside recognition
YPO2984	PF00749	tRNA synthetases class I (E and Q), catalytic domain
YPO2985	PF01797	Transposase IS200 like
YPO2986	PF06042	Bacterial protein of unknown function (DUF925)
YPO2987	PF14282	YPO2987
YPO2988	PF12843	YPO2988
YPO2989	PF00533	BRCA1 C Terminus (BRCT) domain
YPO2989	PF01653	NAD-dependent DNA ligase adenylation domain
YPO2989	PF03119	NAD-dependent DNA ligase C4 zinc finger domain
YPO2989	PF03120	NAD-dependent DNA ligase OB-fold domain
YPO2989	PF12826	Helix-hairpin-helix motif
YPO2989	PF14520	Helix-hairpin-helix domain
YPO2990	PF04354	ZipA, C-terminal FtsZ-binding domain
YPO2991	PF07264	Etoposide-induced protein 2
YPO2992	PF00291	Pyridoxal-phosphate dependent enzyme
YPO2993	PF00381	PTS HPr component phosphorylation site
YPO2994	PF00391	PEP-utilising enzyme, mobile domain
YPO2994	PF02896	PEP-utilising enzyme, TIM barrel domain
YPO2994	PF05524	PEP-utilising enzyme, N-terminal
YPO2995	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
YPO2996	PF01797	Transposase IS200 like
YPO2997	PF00512	His Kinase A (phospho-acceptor) domain
YPO2997	PF00672	HAMP domain
YPO2997	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YPO2998	PF00072	Response regulator receiver domain
YPO2998	PF00486	Transcriptional regulatory protein, C terminal
YPO2999	PF16576	YPO2999
YPO3000	PF00005	ABC transporter
YPO3000	PF02687	YPO3000
YPO3000	PF12704	MacB-like periplasmic core domain
YPO3001	PF00581	Rhodanese-like domain
YPO3001	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
YPO3001	PF07992	Pyridine nucleotide-disulphide oxidoreductase
YPO3003	PF11755	YPO3003
YPO3004	PF00557	Metallopeptidase family M24
YPO3004	PF01321	Creatinase/Prolidase N-terminal domain
YPO3006	PF00155	Aminotransferase class I and II
YPO3007	PF00092	von Willebrand factor type A domain
YPO3008	PF00512	His Kinase A (phospho-acceptor) domain
YPO3008	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YPO3009	PF00072	Response regulator receiver domain
YPO3009	PF00486	Transcriptional regulatory protein, C terminal
YPO3011	PF00291	Pyridoxal-phosphate dependent enzyme
YPO3012	PF00005	ABC transporter
YPO3013	PF00528	Binding-protein-dependent transport system inner membrane component
YPO3014	PF00528	Binding-protein-dependent transport system inner membrane component
YPO3015	PF13531	Bacterial extracellular solute-binding protein
YPO3016	PF07690	Major Facilitator Superfamily
YPO3017	PF01380	SIS domain
YPO3017	PF01418	Helix-turn-helix domain, rpiR family
YPO3019	PF04074	Domain of unknown function (DUF386)
YPO3020	PF00480	ROK family
YPO3023	PF04131	Putative N-acetylmannosamine-6-phosphate epimerase
YPO3024	PF00701	Dihydrodipicolinate synthetase family
YPO3025	PF04261	Dyp-type peroxidase family
YPO3026	PF06572	Protein of unknown function (DUF1131)
YPO3027	PF04076	Bacterial OB fold (BOF) protein
YPO3028	PF03212	Pertactin
YPO3028	PF03797	Autotransporter beta-domain
YPO3031	PF00583	Acetyltransferase (GNAT) family
YPO3032	PF01218	Coproporphyrinogen III oxidase
YPO3033	PF02639	YPO3033
YPO3034	PF00390	Malic enzyme, N-terminal domain
YPO3034	PF01515	Phosphate acetyl/butaryl transferase
YPO3034	PF03949	Malic enzyme, NAD binding domain
YPO3035	PF00293	NUDIX domain
YPO3036	PF03264	NapC/NirT cytochrome c family, N-terminal region
YPO3037	PF03892	Nitrate reductase cytochrome c-type subunit (NapB)
YPO3038	PF00384	Molybdopterin oxidoreductase
YPO3038	PF01568	Molydopterin dinucleotide binding domain
YPO3038	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
YPO3038	PF10518	TAT (twin-arginine translocation) pathway signal sequence
YPO3039	PF03927	NapD protein
YPO3040	PF12838	4Fe-4S dicluster domain
YPO3040	PF13187	4Fe-4S dicluster domain
YPO3041	PF00072	Response regulator receiver domain
YPO3041	PF00196	Bacterial regulatory proteins, luxR family
YPO3042	PF09904	Winged helix-turn helix
YPO3043	PF00873	AcrB/AcrD/AcrF family
YPO3045	PF04307	YPO3045
YPO3046	PF04055	Radical SAM superfamily
YPO3046	PF13353	4Fe-4S single cluster domain
YPO3047	PF00884	Sulfatase
YPO3048	PF00005	ABC transporter
YPO3049	PF00528	Binding-protein-dependent transport system inner membrane component
YPO3050	PF13416	Bacterial extracellular solute-binding protein
YPO3051	PF12688	Tetratrico peptide repeat
YPO3052	PF03960	ArsC family
YPO3053	PF01546	Peptidase family M20/M25/M40
YPO3053	PF07687	Peptidase dimerisation domain
YPO3054	PF02557	D-alanyl-D-alanine carboxypeptidase
YPO3055	PF13980	YPO3055
YPO3056	PF05127	Helicase
YPO3056	PF08351	Domain of unknown function (DUF1726)
YPO3056	PF13718	GNAT acetyltransferase 2
YPO3056	PF17176	YPO3056
YPO3057	PF04284	YPO3057
YPO3058	PF04228	YPO3058
YPO3059	PF01259	SAICAR synthetase
YPO3060	PF01797	Transposase IS200 like
YPO3061	PF06804	NlpB/DapX lipoprotein
YPO3062	PF00701	Dihydrodipicolinate synthetase family
YPO3063	PF13740	ACT domain
YPO3064	PF00578	AhpC/TSA family
YPO3068	PF01594	YPO3068
YPO3069	PF01435	Peptidase family M48
YPO3069	PF07720	Tetratricopeptide repeat
YPO3069	PF14559	Tetratricopeptide repeat
YPO3070	PF03960	ArsC family
YPO3071	PF00308	Bacterial dnaA  protein
YPO3072	PF01797	Transposase IS200 like
YPO3073	PF01406	tRNA synthetases class I (C) catalytic domain
YPO3073	PF09190	DALR domain
YPO3074	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
YPO3075	PF00149	Calcineurin-like phosphoesterase
YPO3076	PF00731	AIR carboxylase
YPO3077	PF02222	ATP-grasp domain
YPO3078	PF02687	YPO3078
YPO3079	PF00005	ABC transporter
YPO3080	PF13472	GDSL-like Lipase/Acylhydrolase family
YPO3081	PF00106	short chain dehydrogenase
YPO3082	PF00085	Thioredoxin
YPO3082	PF14559	Tetratricopeptide repeat
YPO3082	PF14561	Tetratricopeptide repeat
YPO3083	PF01145	SPFH domain / Band 7 family
YPO3084	PF01957	NfeD-like C-terminal, partner-binding
YPO3085	PF13411	MerR HTH family regulatory protein
YPO3086	PF00122	E1-E2 ATPase
YPO3086	PF00403	Heavy-metal-associated domain
YPO3086	PF00702	haloacid dehalogenase-like hydrolase
YPO3087	PF01963	YPO3087
YPO3088	PF04073	Aminoacyl-tRNA editing domain
YPO3093	PF07690	Major Facilitator Superfamily
YPO3094	PF00999	Sodium/hydrogen exchanger family
YPO3094	PF02254	TrkA-N domain
YPO3095	PF00294	pfkB family carbohydrate kinase
YPO3096	PF02706	Chain length determinant protein
YPO3097	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
YPO3097	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
YPO3097	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
YPO3097	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
YPO3098	PF00535	Glycosyl transferase family 2
YPO3099	PF00483	Nucleotidyl transferase
YPO3099	PF01050	Mannose-6-phosphate isomerase
YPO3104	PF00534	Glycosyl transferases group 1
YPO3104	PF13439	Glycosyltransferase Family 4
YPO3107	PF13692	Glycosyl transferases group 1
YPO3111	PF13450	NAD(P)-binding Rossmann-like domain
YPO3112	PF01370	NAD dependent epimerase/dehydratase family
YPO3113	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
YPO3115	PF00483	Nucleotidyl transferase
YPO3116	PF00111	2Fe-2S iron-sulfur cluster binding domain
YPO3116	PF00175	Oxidoreductase NAD-binding domain
YPO3116	PF00970	Oxidoreductase FAD-binding domain
YPO3117	PF00762	Ferrochelatase
YPO3118	PF00406	Adenylate kinase
YPO3118	PF05191	Adenylate kinase, active site lid
YPO3119	PF00183	Hsp90 protein
YPO3119	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YPO3120	PF02132	RecR protein
YPO3120	PF13662	Toprim domain
YPO3121	PF02575	YbaB/EbfC DNA-binding family
YPO3122	PF12168	YPO3122
YPO3122	PF12169	DNA polymerase III subunits gamma and tau domain III
YPO3122	PF12170	DNA polymerase III tau subunit V interacting with alpha
YPO3122	PF13177	DNA polymerase III, delta subunit
YPO3123	PF00156	Phosphoribosyl transferase domain
YPO3125	PF00665	Integrase core domain
YPO3125	PF01695	IstB-like ATP binding protein
YPO3125	PF02796	Helix-turn-helix domain of resolvase
YPO3126	PF04304	YPO3126
YPO3127	PF07445	Primosomal replication protein priB and priC
YPO3128	PF10689	YPO3128
YPO3129	PF00924	Mechanosensitive ion channel
YPO3129	PF12794	YPO3129
YPO3129	PF12795	YPO3129
YPO3130	PF02635	DsrE/DsrF-like family
YPO3131	PF00440	Bacterial regulatory proteins, tetR family
YPO3131	PF08361	MAATS-type transcriptional repressor, C-terminal region
YPO3132	PF00529	HlyD family secretion protein
YPO3132	PF16576	YPO3132
YPO3133	PF00873	AcrB/AcrD/AcrF family
YPO3134	PF01197	Ribosomal protein L31
YPO3135	PF00444	Ribosomal protein L36
YPO3137	PF10757	YPO3137
YPO3138	PF05321	Haemolysin expression modulating protein
YPO3139	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
YPO3140	PF09619	Type III secretion system lipoprotein chaperone (YscW)
YPO3141	PF13622	Thioesterase-like superfamily
YPO3142	PF00909	Ammonium Transporter Family
YPO3143	PF00543	Nitrogen regulatory protein P-II
YPO3144	PF00005	ABC transporter
YPO3144	PF00664	ABC transporter transmembrane region
YPO3145	PF00005	ABC transporter
YPO3145	PF00664	ABC transporter transmembrane region
YPO3146	PF01037	AsnC family
YPO3146	PF13412	Winged helix-turn-helix DNA-binding
YPO3147	PF00291	Pyridoxal-phosphate dependent enzyme
YPO3148	PF08282	haloacid dehalogenase-like hydrolase
YPO3149	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
YPO3149	PF12793	YPO3149
YPO3150	PF06508	Queuosine biosynthesis protein QueC
YPO3151	PF13279	Thioesterase-like superfamily
YPO3152	PF12836	Helix-hairpin-helix motif
YPO3153	PF13145	PPIC-type PPIASE domain
YPO3153	PF13624	SurA N-terminal domain
YPO3154	PF00216	Bacterial DNA-binding protein
YPO3155	PF00004	ATPase family associated with various cellular activities (AAA)
YPO3155	PF02190	ATP-dependent protease La (LON) domain
YPO3155	PF05362	Lon protease (S16) C-terminal proteolytic domain
YPO3156	PF06689	ClpX C4-type zinc finger
YPO3156	PF07724	AAA domain (Cdc48 subfamily)
YPO3156	PF10431	C-terminal, D2-small domain, of ClpB protein
YPO3157	PF00574	Clp protease
YPO3158	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
YPO3158	PF05697	Bacterial trigger factor protein (TF)
YPO3158	PF05698	Bacterial trigger factor protein (TF) C-terminus
YPO3160	PF01722	BolA-like protein
YPO3161	PF03923	YPO3161
YPO3161	PF08139	YPO3161
YPO3162	PF07690	Major Facilitator Superfamily
YPO3163	PF03502	Nucleoside-specific channel-forming protein, Tsx
YPO3164	PF06481	COX Aromatic Rich Motif
YPO3165	PF00115	Cytochrome C and Quinol oxidase polypeptide I
YPO3166	PF00510	Cytochrome c oxidase subunit III
YPO3167	PF03626	YPO3167
YPO3168	PF01040	UbiA prenyltransferase family
YPO3169	PF07690	Major Facilitator Superfamily
YPO3170	PF04461	Protein of unknown function (DUF520)
YPO3171	PF02558	Ketopantoate reductase PanE/ApbA
YPO3171	PF08546	Ketopantoate reductase PanE/ApbA C terminal
YPO3172	PF01965	DJ-1/PfpI family
YPO3173	PF02568	Thiamine biosynthesis protein (ThiI)
YPO3173	PF02926	THUMP domain
YPO3175	PF02609	Exonuclease VII small subunit
YPO3176	PF00348	Polyprenyl synthetase
YPO3177	PF02779	Transketolase, pyrimidine binding domain
YPO3177	PF02780	Transketolase, C-terminal domain
YPO3177	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
YPO3178	PF01797	Transposase IS200 like
YPO3179	PF04608	Phosphatidylglycerophosphatase A
YPO3180	PF00586	AIR synthase related protein, N-terminal domain
YPO3180	PF02769	AIR synthase related protein, C-terminal domain
YPO3181	PF01029	NusB family
YPO3182	PF00885	6,7-dimethyl-8-ribityllumazine synthase
YPO3183	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
YPO3183	PF01872	RibD C-terminal domain
YPO3184	PF03477	ATP cone domain
YPO3187	PF01797	Transposase IS200 like
YPO3188	PF02355	Protein export membrane protein
YPO3188	PF07549	SecD/SecF GG Motif
YPO3189	PF02355	Protein export membrane protein
YPO3189	PF07549	SecD/SecF GG Motif
YPO3189	PF13721	SecD export protein N-terminal TM region
YPO3190	PF02699	Preprotein translocase subunit
YPO3191	PF01702	Queuine tRNA-ribosyltransferase
YPO3192	PF02547	Queuosine biosynthesis protein
YPO3193	PF04336	YPO3193
YPO3194	PF00578	AhpC/TSA family
YPO3194	PF10417	C-terminal domain of 1-Cys peroxiredoxin
YPO3195	PF01797	Transposase IS200 like
YPO3199	PF00106	short chain dehydrogenase
YPO3200	PF00128	Alpha amylase, catalytic domain
YPO3200	PF02903	Alpha amylase, N-terminal ig-like domain
YPO3201	PF00324	Amino acid permease
YPO3202	PF05525	YPO3202
YPO3203	PF12849	PBP superfamily domain
YPO3204	PF00512	His Kinase A (phospho-acceptor) domain
YPO3204	PF00989	PAS fold
YPO3204	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YPO3204	PF11808	YPO3204
YPO3205	PF00072	Response regulator receiver domain
YPO3205	PF00486	Transcriptional regulatory protein, C terminal
YPO3206	PF00149	Calcineurin-like phosphoesterase
YPO3206	PF12320	Type 5 capsule protein repressor C-terminal domain
YPO3207	PF13476	AAA domain
YPO3207	PF13558	Putative exonuclease SbcCD, C subunit
YPO3208	PF01695	IstB-like ATP binding protein
YPO3209	PF00665	Integrase core domain
YPO3209	PF02796	Helix-turn-helix domain of resolvase
YPO3211	PF00480	ROK family
YPO3212	PF04381	Putative exonuclease, RdgC
YPO3213	PF06865	Protein of unknown function (DUF1255)
YPO3215	PF01202	Shikimate kinase
YPO3216	PF00398	Ribosomal RNA adenine dimethylase
YPO3218	PF08241	Methyltransferase domain
YPO3220	PF07238	PilZ domain
YPO3220	PF07317	Flagellar regulator YcgR
YPO3221	PF00171	Aldehyde dehydrogenase family
YPO3222	PF00696	Amino acid kinase family
YPO3222	PF01472	PUA domain
YPO3223	PF07417	Transcriptional regulator Crl
YPO3224	PF06500	Alpha/beta hydrolase of unknown function (DUF1100)
YPO3225	PF00156	Phosphoribosyl transferase domain
YPO3226	PF16083	YPO3226
YPO3227	PF03067	Chitin binding domain
YPO3228	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
YPO3228	PF03466	LysR substrate binding domain
YPO3230	PF01546	Peptidase family M20/M25/M40
YPO3230	PF07687	Peptidase dimerisation domain
YPO3231	PF00817	impB/mucB/samB family
YPO3231	PF11798	IMS family HHH motif
YPO3231	PF11799	impB/mucB/samB family C-terminal domain
YPO3232	PF03009	Glycerophosphoryl diester phosphodiesterase family
YPO3233	PF04400	YPO3233
YPO3234	PF02424	ApbE family
YPO3235	PF00111	2Fe-2S iron-sulfur cluster binding domain
YPO3235	PF00175	Oxidoreductase NAD-binding domain
YPO3235	PF00970	Oxidoreductase FAD-binding domain
YPO3236	PF02508	YPO3236
YPO3237	PF02508	YPO3237
YPO3238	PF04205	FMN-binding domain
YPO3239	PF03116	YPO3239
YPO3240	PF05896	YPO3240
YPO3240	PF11973	YPO3240
YPO3241	PF03734	L,D-transpeptidase catalytic domain
YPO3242	PF13230	Glutamine amidotransferases class-II
YPO3243	PF13580	SIS domain
YPO3244	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
YPO3244	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
YPO3244	PF09317	YPO3244
YPO3245	PF03333	Adhesin biosynthesis transcription regulatory protein
YPO3247	PF05860	haemagglutination activity domain
YPO3247	PF13018	YPO3247
YPO3248	PF08479	POTRA domain, ShlB-type
YPO3249	PF01546	Peptidase family M20/M25/M40
YPO3251	PF00665	Integrase core domain
YPO3251	PF02796	Helix-turn-helix domain of resolvase
YPO3252	PF01695	IstB-like ATP binding protein
YPO3254	PF00005	ABC transporter
YPO3255	PF00528	Binding-protein-dependent transport system inner membrane component
YPO3256	PF00528	Binding-protein-dependent transport system inner membrane component
YPO3257	PF00497	Bacterial extracellular solute-binding proteins, family 3
YPO3259	PF01380	SIS domain
YPO3259	PF01418	Helix-turn-helix domain, rpiR family
YPO3260	PF13318	YPO3260
YPO3261	PF01425	Amidase
YPO3262	PF11533	Protein of unknown function (DUF3225)
YPO3263	PF07690	Major Facilitator Superfamily
YPO3264	PF03591	YPO3264
YPO3265	PF05437	YPO3265
YPO3266	PF01047	MarR family
YPO3267	PF00529	HlyD family secretion protein
YPO3267	PF16576	YPO3267
YPO3268	PF07690	Major Facilitator Superfamily
YPO3269	PF00588	SpoU rRNA Methylase family
YPO3269	PF08032	RNA 2'-O ribose methyltransferase substrate binding
YPO3270	PF00085	Thioredoxin
YPO3271	PF03942	YPO3271
YPO3272	PF00583	Acetyltransferase (GNAT) family
YPO3272	PF13380	CoA binding domain
YPO3272	PF13549	ATP-grasp domain
YPO3272	PF13607	Succinyl-CoA ligase like flavodoxin domain
YPO3273	PF13091	PLD-like domain
YPO3274	PF10043	YPO3274
YPO3275	PF00004	ATPase family associated with various cellular activities (AAA)
YPO3275	PF02861	Clp amino terminal domain
YPO3275	PF07724	AAA domain (Cdc48 subfamily)
YPO3275	PF10431	C-terminal, D2-small domain, of ClpB protein
YPO3276	PF02578	Multi-copper polyphenol oxidoreductase laccase
YPO3277	PF00849	RNA pseudouridylate synthase
YPO3277	PF01479	S4 domain
YPO3278	PF13525	Outer membrane lipoprotein
YPO3279	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
YPO3280	PF01797	Transposase IS200 like
YPO3282	PF00665	Integrase core domain
YPO3282	PF02796	Helix-turn-helix domain of resolvase
YPO3283	PF01695	IstB-like ATP binding protein
YPO3285	PF01817	Chorismate mutase type II
YPO3285	PF02153	Prephenate dehydrogenase
YPO3286	PF00793	DAHP synthetase I family
YPO3287	PF00072	Response regulator receiver domain
YPO3287	PF04397	LytTr DNA-binding domain
YPO3290	PF04338	Protein of unknown function, DUF481
YPO3291	PF01797	Transposase IS200 like
YPO3292	PF01245	Ribosomal protein L19
YPO3293	PF01746	tRNA (Guanine-1)-methyltransferase
YPO3294	PF01782	RimM N-terminal domain
YPO3294	PF05239	PRC-barrel domain
YPO3295	PF00886	Ribosomal protein S16
YPO3296	PF00448	SRP54-type protein, GTPase domain
YPO3296	PF02881	SRP54-type protein, helical bundle domain
YPO3296	PF02978	Signal peptide binding domain
YPO3297	PF01578	YPO3297
YPO3298	PF00571	CBS domain
YPO3298	PF01595	YPO3298
YPO3298	PF03471	Transporter associated domain
YPO3299	PF01797	Transposase IS200 like
YPO3300	PF02664	S-Ribosylhomocysteinase (LuxS)
YPO3301	PF04262	Glutamate-cysteine ligase
YPO3303	PF13419	Haloacid dehalogenase-like hydrolase
YPO3304	PF02599	Global regulator protein family
YPO3305	PF01411	tRNA synthetases class II (A)
YPO3305	PF02272	DHHA1 domain
YPO3305	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
YPO3306	PF02631	RecX family
YPO3307	PF00154	recA bacterial DNA recombination protein
YPO3308	PF02464	Competence-damaged protein
YPO3309	PF07690	Major Facilitator Superfamily
YPO3310	PF01047	MarR family
YPO3310	PF04198	Putative sugar-binding domain
YPO3311	PF02952	L-fucose isomerase, C-terminal domain
YPO3312	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
YPO3312	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
YPO3313	PF02779	Transketolase, pyrimidine binding domain
YPO3313	PF02780	Transketolase, C-terminal domain
YPO3314	PF00456	Transketolase, thiamine diphosphate binding domain
YPO3315	PF02653	YPO3315
YPO3316	PF00005	ABC transporter
YPO3317	PF10054	Predicted periplasmic lipoprotein (DUF2291)
YPO3318	PF13407	Periplasmic binding protein domain
YPO3319	PF00141	Peroxidase
YPO3320	PF07361	Cytochrome b562
YPO3321	PF01292	Prokaryotic cytochrome b561
YPO3322	PF02613	Nitrate reductase delta subunit
YPO3323	PF04976	YPO3323
YPO3324	PF12800	4Fe-4S binding domain
YPO3324	PF13247	4Fe-4S dicluster domain
YPO3325	PF00384	Molybdopterin oxidoreductase
YPO3325	PF01568	Molydopterin dinucleotide binding domain
YPO3325	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
YPO3326	PF00596	Class II Aldolase and Adducin N-terminal domain
YPO3327	PF00455	YPO3327
YPO3327	PF08220	DeoR-like helix-turn-helix domain
YPO3328	PF13407	Periplasmic binding protein domain
YPO3329	PF01797	Transposase IS200 like
YPO3330	PF00005	ABC transporter
YPO3331	PF02653	YPO3331
YPO3332	PF02653	YPO3332
YPO3333	PF01261	Xylose isomerase-like TIM barrel
YPO3334	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
YPO3334	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
YPO3335	PF05681	YPO3335
YPO3335	PF05683	Fumarase C-terminus
YPO3336	PF11903	YPO3336
YPO3337	PF00557	Metallopeptidase family M24
YPO3339	PF07906	YPO3339
YPO3342	PF00034	Cytochrome c
YPO3342	PF03150	Di-haem cytochrome c peroxidase
YPO3342	PF14376	YPO3342
YPO3343	PF00497	Bacterial extracellular solute-binding proteins, family 3
YPO3345	PF04703	FaeA-like protein
YPO3346	PF01022	Bacterial regulatory protein, arsR family
YPO3347	PF02040	YPO3347
YPO3348	PF04198	Putative sugar-binding domain
YPO3348	PF13518	Helix-turn-helix domain
YPO3349	PF02734	DAK2 domain
YPO3350	PF02733	Dak1 domain
YPO3351	PF13561	Enoyl-(Acyl carrier protein) reductase
YPO3352	PF00107	Zinc-binding dehydrogenase
YPO3352	PF08240	Alcohol dehydrogenase GroES-like domain
YPO3353	PF02502	Ribose/Galactose Isomerase
YPO3354	PF00488	MutS domain V
YPO3354	PF01624	MutS domain I
YPO3354	PF05188	MutS domain II
YPO3354	PF05190	MutS family domain IV
YPO3354	PF05192	MutS domain III
YPO3355	PF00140	Sigma-70 factor, region 1
YPO3355	PF04539	Sigma-70 region 3
YPO3355	PF04542	Sigma-70 region 2
YPO3355	PF04545	Sigma-70, region 4
YPO3356	PF01476	LysM domain
YPO3356	PF01551	Peptidase family M23
YPO3357	PF01135	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
YPO3358	PF01975	Survival protein SurE
YPO3359	PF01142	tRNA pseudouridine synthase D (TruD)
YPO3360	PF02542	YgbB family
YPO3361	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
YPO3362	PF04977	Septum formation initiator
YPO3363	PF12084	YPO3363
YPO3364	PF01583	Adenylylsulphate kinase
YPO3365	PF00009	Elongation factor Tu GTP binding domain
YPO3366	PF01507	Phosphoadenosine phosphosulfate reductase family
YPO3367	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
YPO3367	PF10414	Sirohaem synthase dimerisation region
YPO3367	PF13241	Putative NAD(P)-binding
YPO3367	PF14824	Sirohaem biosynthesis protein central
YPO3368a	PF07927	YcfA-like protein
YPO3369	PF15919	YPO3369
YPO3371	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
YPO3371	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
YPO3372	PF00175	Oxidoreductase NAD-binding domain
YPO3372	PF00258	Flavodoxin
YPO3372	PF00667	FAD binding domain
YPO3373	PF01242	6-pyruvoyl tetrahydropterin synthase
YPO3374	PF04055	Radical SAM superfamily
YPO3374	PF13394	4Fe-4S single cluster domain
YPO3375	PF00080	Copper/zinc superoxide dismutase (SODC)
YPO3376	PF00113	Enolase, C-terminal TIM barrel domain
YPO3376	PF03952	Enolase, N-terminal domain
YPO3377	PF00117	Glutamine amidotransferase class-I
YPO3377	PF06418	CTP synthase N-terminus
YPO3378	PF03819	MazG nucleotide pyrophosphohydrolase domain
YPO3380	PF02824	TGS domain
YPO3380	PF04607	Region found in RelA / SpoT proteins
YPO3380	PF13291	ACT domain
YPO3380	PF13328	HD domain
YPO3381	PF00072	Response regulator receiver domain
YPO3381	PF00512	His Kinase A (phospho-acceptor) domain
YPO3381	PF00672	HAMP domain
YPO3381	PF01627	Hpt domain
YPO3381	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YPO3381	PF09984	YPO3381
YPO3382	PF00595	PDZ domain (Also known as DHR or GLGF)
YPO3382	PF13180	PDZ domain
YPO3382	PF13365	Trypsin-like peptidase domain
YPO3383	PF01966	HD domain
YPO3383	PF13286	Phosphohydrolase-associated domain
YPO3384	PF01048	Phosphorylase superfamily
YPO3385	PF01497	Periplasmic binding protein
YPO3386	PF03458	YPO3386
YPO3387	PF01521	Iron-sulphur cluster biosynthesis
YPO3388	PF00654	Voltage gated chloride channel
YPO3389	PF00202	Aminotransferase class-III
YPO3390	PF01032	FecCD transport family
YPO3391	PF01497	Periplasmic binding protein
YPO3392	PF00005	ABC transporter
YPO3393	PF00905	Penicillin binding protein transpeptidase domain
YPO3393	PF00912	Transglycosylase
YPO3393	PF14812	YPO3393
YPO3393	PF14814	Bifunctional transglycosylase second domain
YPO3394	PF00270	DEAD/DEAH box helicase
YPO3394	PF00271	Helicase conserved C-terminal domain
YPO3394	PF04408	Helicase associated domain (HA2)
YPO3394	PF08482	YPO3394
YPO3395	PF02834	LigT like Phosphoesterase
YPO3396	PF03749	Sugar fermentation stimulation protein
YPO3397	PF01258	Prokaryotic dksA/traR C4-type zinc finger
YPO3398	PF00749	tRNA synthetases class I (E and Q), catalytic domain
YPO3399	PF01743	Poly A polymerase head domain
YPO3399	PF12626	Polymerase A arginine-rich C-terminus
YPO3399	PF12627	Probable RNA and SrmB- binding site of polymerase A
YPO3400	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
YPO3401	PF02548	Ketopantoate hydroxymethyltransferase
YPO3402	PF02569	Pantoate-beta-alanine ligase
YPO3403	PF02261	Aspartate decarboxylase
YPO3404	PF01522	Polysaccharide deacetylase
YPO3405	PF01061	YPO3405
YPO3406	PF00005	ABC transporter
YPO3407	PF00484	Carbonic anhydrase
YPO3408	PF00156	Phosphoribosyl transferase domain
YPO3409	PF00394	Multicopper oxidase
YPO3409	PF07731	Multicopper oxidase
YPO3409	PF07732	Multicopper oxidase
YPO3409	PF10518	TAT (twin-arginine translocation) pathway signal sequence
YPO3410	PF09691	Bacterial chaperone lipoprotein (PulS_OutS)
YPO3411	PF01564	Spermine/spermidine synthase
YPO3412	PF02675	S-adenosylmethionine decarboxylase
YPO3413	PF00892	EamA-like transporter family
YPO3414	PF06062	YPO3414
YPO3415	PF00330	Aconitase family (aconitate hydratase)
YPO3415	PF06434	Aconitate hydratase 2 N-terminus
YPO3415	PF11791	Aconitate B N-terminal domain
YPO3416	PF01797	Transposase IS200 like
YPO3417	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
YPO3417	PF07992	Pyridine nucleotide-disulphide oxidoreductase
YPO3418	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
YPO3418	PF00364	Biotin-requiring enzyme
YPO3418	PF02817	e3 binding domain
YPO3419	PF00456	Transketolase, thiamine diphosphate binding domain
YPO3420	PF00392	Bacterial regulatory proteins, gntR family
YPO3420	PF07729	FCD domain
YPO3421	PF00324	Amino acid permease
YPO3422	PF17113	YPO3422
YPO3423	PF01510	N-acetylmuramoyl-L-alanine amidase
YPO3424	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
YPO3424	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
YPO3425	PF13633	Prokaryotic N-terminal methylation site
YPO3426	PF00437	Type II/IV secretion system protein
YPO3427	PF00482	Type II secretion system (T2SS), protein F
YPO3428	PF00478	IMP dehydrogenase / GMP reductase domain
YPO3430	PF01121	Dephospho-CoA kinase
YPO3431	PF07072	Protein of unknown function (DUF1342)
YPO3432	PF03884	Domain of unknown function (DUF329)
YPO3433	PF01797	Transposase IS200 like
YPO3434	PF00665	Integrase core domain
YPO3434	PF02796	Helix-turn-helix domain of resolvase
YPO3435	PF01695	IstB-like ATP binding protein
YPO3436	PF13589	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YPO3437	PF03235	YPO3437
YPO3437	PF07510	YPO3437
YPO3438	PF00589	Phage integrase family
YPO3438	PF13356	Domain of unknown function (DUF4102)
YPO3439	PF03739	YPO3439
YPO3440	PF03739	YPO3440
YPO3441	PF00883	Cytosol aminopeptidase family, catalytic domain
YPO3441	PF02789	Cytosol aminopeptidase family, N-terminal domain
YPO3442	PF04364	DNA polymerase III chi subunit, HolC
YPO3443	PF00133	tRNA synthetases class I (I, L, M and V)
YPO3443	PF08264	Anticodon-binding domain of tRNA
YPO3443	PF10458	Valyl tRNA synthetase tRNA binding arm
YPO3444	PF00583	Acetyltransferase (GNAT) family
YPO3445	PF06877	Regulator of ribonuclease activity B
YPO3446	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
YPO3446	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
YPO3447	PF04074	Domain of unknown function (DUF386)
YPO3450	PF00528	Binding-protein-dependent transport system inner membrane component
YPO3451	PF00528	Binding-protein-dependent transport system inner membrane component
YPO3451	PF12911	YPO3451
YPO3452	PF00005	ABC transporter
YPO3453	PF00005	ABC transporter
YPO3454	PF03477	ATP cone domain
YPO3454	PF13597	Anaerobic ribonucleoside-triphosphate reductase
YPO3455	PF13353	4Fe-4S single cluster domain
YPO3456	PF00392	Bacterial regulatory proteins, gntR family
YPO3456	PF07702	UTRA domain
YPO3457	PF06754	YPO3457
YPO3458	PF05845	Bacterial phosphonate metabolism protein (PhnH)
YPO3459	PF05861	YPO3459
YPO3460	PF06007	YPO3460
YPO3461	PF00005	ABC transporter
YPO3462	PF00005	ABC transporter
YPO3463	PF07969	Amidohydrolase family
YPO3464	PF13238	AAA domain
YPO3465	PF12706	Beta-lactamase superfamily domain
YPO3468	PF05426	Alginate lyase
YPO3469	PF00005	ABC transporter
YPO3469	PF08402	TOBE domain
YPO3470	PF00528	Binding-protein-dependent transport system inner membrane component
YPO3471	PF00528	Binding-protein-dependent transport system inner membrane component
YPO3472	PF01547	Bacterial extracellular solute-binding protein
YPO3473	PF05426	Alginate lyase
YPO3474	PF05426	Alginate lyase
YPO3474	PF07940	Heparinase II/III-like protein
YPO3475	PF01541	GIY-YIG catalytic domain
YPO3476	PF00583	Acetyltransferase (GNAT) family
YPO3477	PF02036	SCP-2 sterol transfer family
YPO3479	PF01136	YPO3479
YPO3480	PF01136	YPO3480
YPO3481	PF02321	Outer membrane efflux protein
YPO3482	PF00873	AcrB/AcrD/AcrF family
YPO3483	PF16576	YPO3483
YPO3484	PF00296	Luciferase-like monooxygenase
YPO3485	PF01381	Helix-turn-helix
YPO3486	PF05973	YPO3486
YPO3488	PF00270	DEAD/DEAH box helicase
YPO3488	PF00271	Helicase conserved C-terminal domain
YPO3488	PF03880	DbpA RNA binding domain
YPO3488	PF12343	YPO3488
YPO3489	PF07719	Tetratricopeptide repeat
YPO3489	PF13181	Tetratricopeptide repeat
YPO3490	PF00013	KH domain
YPO3490	PF00575	S1 RNA binding domain
YPO3490	PF01138	3' exoribonuclease family, domain 1
YPO3490	PF03725	3' exoribonuclease family, domain 2
YPO3490	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
YPO3491	PF00665	Integrase core domain
YPO3491	PF13276	YPO3491
YPO3492	PF13518	Helix-turn-helix domain
YPO3493	PF00312	Ribosomal protein S15
YPO3494	PF01509	TruB family pseudouridylate synthase (N terminal domain)
YPO3494	PF09157	Pseudouridine synthase II TruB, C-terminal
YPO3494	PF16198	YPO3494
YPO3495	PF02033	Ribosome-binding factor A
YPO3496	PF00009	Elongation factor Tu GTP binding domain
YPO3496	PF03144	Elongation factor Tu domain 2
YPO3496	PF04760	Translation initiation factor IF-2, N-terminal region
YPO3496	PF08364	YPO3496
YPO3496	PF11987	Translation-initiation factor 2
YPO3497	PF08529	NusA N-terminal domain
YPO3497	PF13184	NusA-like KH domain
YPO3497	PF14520	Helix-hairpin-helix domain
YPO3498	PF02576	Uncharacterised BCR, YhbC family COG0779
YPO3499	PF03840	Preprotein translocase SecG subunit
YPO3500	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
YPO3500	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
YPO3500	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
YPO3500	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
YPO3501	PF00809	Pterin binding enzyme
YPO3502	PF00004	ATPase family associated with various cellular activities (AAA)
YPO3502	PF01434	Peptidase family M41
YPO3502	PF06480	FtsH Extracellular
YPO3503	PF01728	FtsJ-like methyltransferase
YPO3504	PF01985	CRS1 / YhbY (CRM) domain
YPO3505	PF01272	Transcription elongation factor, GreA/GreB, C-term
YPO3505	PF03449	Transcription elongation factor, N-terminal
YPO3506	PF02113	D-Ala-D-Ala carboxypeptidase 3 (S13) family
YPO3507	PF00072	Response regulator receiver domain
YPO3507	PF00486	Transcriptional regulatory protein, C terminal
YPO3508	PF00512	His Kinase A (phospho-acceptor) domain
YPO3508	PF00672	HAMP domain
YPO3508	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YPO3509	PF01018	GTP1/OBG
YPO3509	PF01926	50S ribosome-binding GTPase
YPO3510	PF00892	EamA-like transporter family
YPO3511	PF01016	Ribosomal L27 protein
YPO3512	PF00829	Ribosomal prokaryotic L21 protein
YPO3513	PF00348	Polyprenyl synthetase
YPO3514	PF02316	Mu DNA-binding domain
YPO3514a	PF13693	Winged helix-turn-helix DNA-binding
YPO3516	PF00056	lactate/malate dehydrogenase, NAD binding domain
YPO3516	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
YPO3517	PF01316	Arginine repressor, DNA binding domain
YPO3517	PF02863	Arginine repressor, C-terminal domain
YPO3518	PF07338	Protein of unknown function (DUF1471)
YPO3519	PF01225	Mur ligase family, catalytic domain
YPO3519	PF02875	Mur ligase family, glutamate ligase domain
YPO3519	PF08245	Mur ligase middle domain
YPO3520	PF00316	Fructose-1-6-bisphosphatase
YPO3521	PF00719	Inorganic pyrophosphatase
YPO3522	PF06094	AIG2-like family
YPO3523	PF04357	YPO3523
YPO3524	PF01103	Surface antigen
YPO3524	PF07244	Surface antigen variable number repeat
YPO3525	PF01625	Peptide methionine sulfoxide reductase
YPO3526	PF00571	CBS domain
YPO3526	PF01595	YPO3526
YPO3526	PF03471	Transporter associated domain
YPO3527	PF06526	Protein of unknown function (DUF1107)
YPO3528	PF09695	YPO3528
YPO3529	PF00459	Inositol monophosphatase family
YPO3530	PF00149	Calcineurin-like phosphoesterase
YPO3530	PF02872	5'-nucleotidase, C-terminal domain
YPO3531	PF01814	Hemerythrin HHE cation binding domain
YPO3531	PF04405	YPO3531
YPO3532	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
YPO3532	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
YPO3533	PF04225	Opacity-associated protein A LysM-like domain
YPO3533	PF08525	YPO3533
YPO3534	PF12582	YPO3534
YPO3535	PF01797	Transposase IS200 like
YPO3536	PF01281	Ribosomal protein L9, N-terminal domain
YPO3536	PF03948	Ribosomal protein L9, C-terminal domain
YPO3537	PF01084	Ribosomal protein S18
YPO3538	PF00436	Single-strand binding protein family
YPO3539	PF01250	Ribosomal protein S6
YPO3541	PF00326	Prolyl oligopeptidase family
YPO3542	PF00665	Integrase core domain
YPO3542	PF02796	Helix-turn-helix domain of resolvase
YPO3543	PF01695	IstB-like ATP binding protein
YPO3544	PF13409	Glutathione S-transferase, N-terminal domain
YPO3544	PF13410	Glutathione S-transferase, C-terminal domain
YPO3545	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
YPO3545	PF03466	LysR substrate binding domain
YPO3546	PF02678	Pirin
YPO3547	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
YPO3548	PF04348	LppC putative lipoprotein
YPO3549	PF02021	Uncharacterised protein family UPF0102
YPO3550	PF13580	SIS domain
YPO3551	PF04972	BON domain
YPO3552	PF00912	Transglycosylase
YPO3555	PF00072	Response regulator receiver domain
YPO3555	PF00512	His Kinase A (phospho-acceptor) domain
YPO3555	PF00989	PAS fold
YPO3555	PF01627	Hpt domain
YPO3555	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YPO3556	PF04055	Radical SAM superfamily
YPO3556	PF16199	YPO3556
YPO3557	PF00310	Glutamine amidotransferases class-II
YPO3557	PF01493	GXGXG motif
YPO3557	PF01645	Conserved region in glutamate synthase
YPO3557	PF04898	Glutamate synthase central domain
YPO3558	PF07992	Pyridine nucleotide-disulphide oxidoreductase
YPO3558	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
YPO3560	PF04386	Stringent starvation protein B
YPO3561	PF00043	Glutathione S-transferase, C-terminal domain
YPO3561	PF02798	Glutathione S-transferase, N-terminal domain
YPO3562	PF00380	Ribosomal protein S9/S16
YPO3563	PF00572	Ribosomal protein L13
YPO3564	PF03969	AFG1-like ATPase
YPO3565	PF06295	YPO3565
YPO3566	PF00595	PDZ domain (Also known as DHR or GLGF)
YPO3566	PF13180	PDZ domain
YPO3566	PF13365	Trypsin-like peptidase domain
YPO3567	PF01797	Transposase IS200 like
YPO3568	PF13180	PDZ domain
YPO3568	PF13365	Trypsin-like peptidase domain
YPO3569	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
YPO3570	PF01722	BolA-like protein
YPO3571	PF13466	STAS domain
YPO3572	PF05494	Toluene tolerance, Ttg2
YPO3573	PF02470	YPO3573
YPO3574	PF02405	YPO3574
YPO3575	PF00005	ABC transporter
YPO3576	PF01699	Sodium/calcium exchanger protein
YPO3577	PF00571	CBS domain
YPO3577	PF01380	SIS domain
YPO3578	PF08282	haloacid dehalogenase-like hydrolase
YPO3579	PF06835	Lipopolysaccharide-assembly, LptC-related
YPO3580	PF03968	OstA-like protein
YPO3581	PF00005	ABC transporter
YPO3581	PF12399	Branched-chain amino acid ATP-binding cassette transporter
YPO3582	PF00309	YPO3582
YPO3582	PF04552	Sigma-54, DNA binding domain
YPO3582	PF04963	Sigma-54 factor, core binding domain
YPO3585	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
YPO3586	PF03668	YPO3586
YPO3587	PF00381	PTS HPr component phosphorylation site
YPO3588	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
YPO3588	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
YPO3589	PF01948	Aspartate carbamoyltransferase regulatory chain, allosteric domain
YPO3589	PF02748	Aspartate carbamoyltransferase regulatory chain, metal binding domain
YPO3590	PF01042	Endoribonuclease L-PSP
YPO3591	PF00665	Integrase core domain
YPO3591	PF02796	Helix-turn-helix domain of resolvase
YPO3592	PF01695	IstB-like ATP binding protein
YPO3593	PF05947	YPO3593
YPO3594	PF06996	YPO3594
YPO3596	PF12790	Type VI secretion lipoprotein
YPO3597	PF05936	YPO3597
YPO3598	PF09850	Uncharacterized protein conserved in bacteria (DUF2077)
YPO3599	PF00004	ATPase family associated with various cellular activities (AAA)
YPO3599	PF07724	AAA domain (Cdc48 subfamily)
YPO3599	PF10431	C-terminal, D2-small domain, of ClpB protein
YPO3600	PF02954	Bacterial regulatory protein, Fis family
YPO3601	PF11319	YPO3601
YPO3602	PF06812	YPO3602
YPO3602	PF16989	YPO3602
YPO3603	PF06744	YPO3603
YPO3603	PF06761	YPO3603
YPO3603	PF14331	YPO3603
YPO3606	PF05954	Phage late control gene D protein (GPD)
YPO3607	PF08786	Domain of unknown function (DUF1795)
YPO3610	PF09346	SMI1 / KNR4 family (SUKH-1)
YPO3611	PF08845	YPO3611
YPO3611a	PF08845	YPO3611a
YPO3612	PF01381	Helix-turn-helix
YPO3613	PF05954	Phage late control gene D protein (GPD)
YPO3614	PF08786	Domain of unknown function (DUF1795)
YPO3615	PF03527	YPO3615
YPO3615	PF05488	PAAR motif
YPO3615	PF05593	YPO3615
YPO3617	PF01261	Xylose isomerase-like TIM barrel
YPO3618	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
YPO3619	PF02311	AraC-like ligand binding domain
YPO3619	PF12833	Helix-turn-helix domain
YPO3620	PF05025	RbsD / FucU transport protein family
YPO3621	PF00294	pfkB family carbohydrate kinase
YPO3622	PF01791	DeoC/LacD family aldolase
YPO3623	PF03358	NADPH-dependent FMN reductase
YPO3624	PF09084	NMT1/THI5 like
YPO3625	PF00296	Luciferase-like monooxygenase
YPO3626	PF00528	Binding-protein-dependent transport system inner membrane component
YPO3627	PF00005	ABC transporter
YPO3629	PF00860	Permease family
YPO3630	PF00999	Sodium/hydrogen exchanger family
YPO3632	PF03279	YPO3632
YPO3633	PF13407	Periplasmic binding protein domain
YPO3634	PF00005	ABC transporter
YPO3635	PF02653	YPO3635
YPO3636	PF02653	YPO3636
YPO3637	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
YPO3637	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
YPO3638	PF01380	SIS domain
YPO3639	PF00043	Glutathione S-transferase, C-terminal domain
YPO3639	PF02798	Glutathione S-transferase, N-terminal domain
YPO3640	PF13449	Esterase-like activity of phytase
YPO3642	PF01797	Transposase IS200 like
YPO3643	PF00313	'Cold-shock' DNA-binding domain
YPO3644	PF00313	'Cold-shock' DNA-binding domain
YPO3646	PF05433	YPO3646
YPO3647	PF00753	Metallo-beta-lactamase superfamily
YPO3648	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
YPO3648	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
YPO3649	PF02627	Carboxymuconolactone decarboxylase family
YPO3650	PF07690	Major Facilitator Superfamily
YPO3651	PF00392	Bacterial regulatory proteins, gntR family
YPO3651	PF07729	FCD domain
YPO3653	PF09204	Bacterial self-protective colicin-like immunity
YPO3654	PF02954	Bacterial regulatory protein, Fis family
YPO3655	PF01207	Dihydrouridine synthase (Dus)
YPO3656	PF06325	Ribosomal protein L11 methyltransferase (PrmA)
YPO3657	PF00474	Sodium:solute symporter family
YPO3657a	PF06196	YPO3657a
YPO3658	PF00289	Carbamoyl-phosphate synthase L chain, N-terminal domain
YPO3658	PF02785	Biotin carboxylase C-terminal domain
YPO3658	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
YPO3659	PF00364	Biotin-requiring enzyme
YPO3660	PF01220	Dehydroquinase class II
YPO3661	PF01794	YPO3661
YPO3662	PF00174	Oxidoreductase molybdopterin binding domain
YPO3663	PF00107	Zinc-binding dehydrogenase
YPO3663	PF08240	Alcohol dehydrogenase GroES-like domain
YPO3664	PF00563	EAL domain
YPO3664	PF00990	GGDEF domain
YPO3664	PF17157	YPO3664
YPO3665	PF06723	MreB/Mbl protein
YPO3666	PF04085	rod shape-determining protein MreC
YPO3667	PF04093	YPO3667
YPO3668	PF02545	Maf-like protein
YPO3669	PF00575	S1 RNA binding domain
YPO3669	PF10150	Ribonuclease E/G family
YPO3670	PF13116	YPO3670
YPO3670	PF13502	YPO3670
YPO3671	PF00795	Carbon-nitrogen hydrolase
YPO3672	PF01523	Putative modulator of DNA gyrase
YPO3674	PF00782	Dual specificity phosphatase, catalytic domain
YPO3675	PF10828	YPO3675
YPO3676	PF13539	D-alanyl-D-alanine carboxypeptidase
YPO3677	PF16083	YPO3677
YPO3678	PF03534	Salmonella virulence plasmid 65kDa B protein
YPO3678	PF12255	Insecticide toxin TcdB middle/C-terminal region
YPO3678	PF12256	Insecticide toxin TcdB middle/N-terminal region
YPO3681	PF03538	Salmonella virulence plasmid 28
YPO3682	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
YPO3683	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
YPO3683	PF03466	LysR substrate binding domain
YPO3684	PF07869	YPO3684
YPO3685	PF13437	HlyD family secretion protein
YPO3685	PF13533	Biotin-lipoyl like
YPO3686	PF04632	YPO3686
YPO3689	PF00545	ribonuclease
YPO3690	PF01337	Barstar (barnase inhibitor)
YPO3691	PF04751	Protein of unknown function (DUF615)
YPO3692	PF01523	Putative modulator of DNA gyrase
YPO3694	PF07361	Cytochrome b562
YPO3695	PF01272	Transcription elongation factor, GreA/GreB, C-term
YPO3695	PF14760	Rnk N-terminus
YPO3696	PF00128	Alpha amylase, catalytic domain
YPO3696	PF11941	Domain of unknown function (DUF3459)
YPO3697	PF00367	phosphotransferase system, EIIB
YPO3697	PF02378	Phosphotransferase system, EIIC
YPO3698	PF00356	Bacterial regulatory proteins, lacI family
YPO3698	PF13377	Periplasmic binding protein-like domain
YPO3699	PF16743	YPO3699
YPO3700	PF01695	IstB-like ATP binding protein
YPO3701	PF00665	Integrase core domain
YPO3701	PF02796	Helix-turn-helix domain of resolvase
YPO3703	PF00665	Integrase core domain
YPO3703	PF13276	YPO3703
YPO3704	PF05947	YPO3704
YPO3705	PF04965	Gene 25-like lysozyme
YPO3706	PF05943	YPO3706
YPO3707	PF05591	YPO3707
YPO3708	PF05638	Protein of unknown function (DUF796)
YPO3710	PF07148	YPO3710
YPO3711	PF02264	LamB porin
YPO3712	PF00005	ABC transporter
YPO3712	PF08402	TOBE domain
YPO3714	PF13416	Bacterial extracellular solute-binding protein
YPO3715	PF00528	Binding-protein-dependent transport system inner membrane component
YPO3715	PF14785	Maltose transport system permease protein MalF P2 domain
YPO3716	PF00528	Binding-protein-dependent transport system inner membrane component
YPO3717	PF06146	YPO3717
YPO3718	PF00342	Phosphoglucose isomerase
YPO3719	PF00696	Amino acid kinase family
YPO3720	PF03865	Haemolysin secretion/activation protein ShlB/FhaC/HecB
YPO3720	PF08479	POTRA domain, ShlB-type
YPO3721	PF05860	haemagglutination activity domain
YPO3721	PF13332	YPO3721
YPO3722	PF00809	Pterin binding enzyme
YPO3722	PF02310	B12 binding domain
YPO3722	PF02574	Homocysteine S-methyltransferase
YPO3722	PF02607	B12 binding domain
YPO3722	PF02965	Vitamin B12 dependent methionine synthase, activation domain
YPO3724	PF06315	Isocitrate dehydrogenase kinase/phosphatase (AceK)
YPO3725	PF00463	Isocitrate lyase family
YPO3726	PF01274	Malate synthase
YPO3727	PF04204	Homoserine O-succinyltransferase
YPO3728	PF01808	AICARFT/IMPCHase bienzyme
YPO3728	PF02142	MGS-like domain
YPO3729	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
YPO3729	PF02843	Phosphoribosylglycinamide synthetase, C domain
YPO3729	PF02844	Phosphoribosylglycinamide synthetase, N domain
YPO3730	PF07356	YPO3730
YPO3731	PF00216	Bacterial DNA-binding protein
YPO3732	PF04222	Protein of unknown function (DUF416)
YPO3733	PF04493	Endonuclease V
YPO3734	PF01208	Uroporphyrinogen decarboxylase (URO-D)
YPO3736	PF00293	NUDIX domain
YPO3736	PF09297	NADH pyrophosphatase zinc ribbon domain
YPO3737	PF04353	Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ
YPO3739	PF01964	ThiC family
YPO3739	PF13667	ThiC-associated domain
YPO3740	PF02581	Thiamine monophosphate synthase/TENI
YPO3741	PF00899	ThiF family
YPO3741a	PF02597	ThiS family
YPO3742	PF05690	Thiazole biosynthesis protein ThiG
YPO3743	PF04055	Radical SAM superfamily
YPO3743	PF06968	Biotin and Thiamin Synthesis associated domain
YPO3745	PF01797	Transposase IS200 like
YPO3746	PF00623	RNA polymerase Rpb1, domain 2
YPO3746	PF04983	RNA polymerase Rpb1, domain 3
YPO3746	PF04997	RNA polymerase Rpb1, domain 1
YPO3746	PF04998	RNA polymerase Rpb1, domain 5
YPO3746	PF05000	RNA polymerase Rpb1, domain 4
YPO3747	PF00562	RNA polymerase Rpb2, domain 6
YPO3747	PF04560	RNA polymerase Rpb2, domain 7
YPO3747	PF04561	RNA polymerase Rpb2, domain 2
YPO3747	PF04563	RNA polymerase beta subunit
YPO3747	PF04565	RNA polymerase Rpb2, domain 3
YPO3747	PF10385	RNA polymerase beta subunit external 1 domain
YPO3748	PF00542	Ribosomal protein L7/L12 C-terminal domain
YPO3748	PF16320	YPO3748
YPO3749	PF00466	Ribosomal protein L10
YPO3750	PF00687	Ribosomal protein L1p/L10e family
YPO3751	PF00298	Ribosomal protein L11, RNA binding domain
YPO3751	PF03946	Ribosomal protein L11, N-terminal domain
YPO3752	PF00467	KOW motif
YPO3752	PF02357	Transcription termination factor nusG
YPO3753	PF00584	SecE/Sec61-gamma subunits of protein translocation complex
YPO3754	PF00009	Elongation factor Tu GTP binding domain
YPO3754	PF03143	Elongation factor Tu C-terminal domain
YPO3754	PF03144	Elongation factor Tu domain 2
YPO3755	PF01695	IstB-like ATP binding protein
YPO3756	PF00665	Integrase core domain
YPO3756	PF02796	Helix-turn-helix domain of resolvase
YPO3757	PF13673	Acetyltransferase (GNAT) domain
YPO3758	PF00485	Phosphoribulokinase / Uridine kinase family
YPO3759	PF02237	Biotin protein ligase C terminal domain
YPO3759	PF03099	Biotin/lipoate A/B protein ligase family
YPO3759	PF08279	HTH domain
YPO3760	PF01565	FAD binding domain
YPO3760	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
YPO3761	PF12724	Flavodoxin domain
YPO3762	PF02386	Cation transport protein
YPO3764	PF01797	Transposase IS200 like
YPO3764a	PF01205	Uncharacterized protein family UPF0029
YPO3764a	PF09186	Domain of unknown function (DUF1949)
YPO3765	PF00557	Metallopeptidase family M24
YPO3766	PF00378	Enoyl-CoA hydratase/isomerase family
YPO3766	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
YPO3766	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
YPO3767	PF00108	Thiolase, N-terminal domain
YPO3767	PF02803	Thiolase, C-terminal domain
YPO3768	PF00175	Oxidoreductase NAD-binding domain
YPO3768	PF00970	Oxidoreductase FAD-binding domain
YPO3769	PF01977	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
YPO3770	PF02357	Transcription termination factor nusG
YPO3771	PF00490	Delta-aminolevulinic acid dehydratase
YPO3773	PF01695	IstB-like ATP binding protein
YPO3774	PF00665	Integrase core domain
YPO3774	PF02796	Helix-turn-helix domain of resolvase
YPO3776	PF00902	Sec-independent protein translocase protein (TatC)
YPO3778	PF02416	mttA/Hcf106 family
YPO3779	PF03109	YPO3779
YPO3780	PF02036	SCP-2 sterol transfer family
YPO3781	PF01209	ubiE/COQ5 methyltransferase family
YPO3782	PF02646	YPO3782
YPO3783	PF09335	YPO3783
YPO3784	PF02554	YPO3784
YPO3784	PF13722	YPO3784
YPO3785	PF13350	Tyrosine phosphatase family
YPO3786	PF01048	Phosphorylase superfamily
YPO3787	PF01738	Dienelactone hydrolase family
YPO3788	PF01717	Cobalamin-independent synthase, Catalytic domain
YPO3788	PF08267	Cobalamin-independent synthase, N-terminal domain
YPO3789	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
YPO3789	PF03466	LysR substrate binding domain
YPO3790	PF00892	EamA-like transporter family
YPO3791	PF03547	YPO3791
YPO3792	PF03009	Glycerophosphoryl diester phosphodiesterase family
YPO3793	PF00005	ABC transporter
YPO3793	PF08402	TOBE domain
YPO3794	PF00528	Binding-protein-dependent transport system inner membrane component
YPO3795	PF00528	Binding-protein-dependent transport system inner membrane component
YPO3796	PF13416	Bacterial extracellular solute-binding protein
YPO3797	PF04449	CS1 type fimbrial major subunit
YPO3798	PF16967	YPO3798
YPO3801	PF04449	CS1 type fimbrial major subunit
YPO3804	PF00005	ABC transporter
YPO3805	PF00005	ABC transporter
YPO3805	PF12399	Branched-chain amino acid ATP-binding cassette transporter
YPO3806	PF02653	YPO3806
YPO3806	PF11862	YPO3806
YPO3807	PF02653	YPO3807
YPO3808	PF13458	Periplasmic binding protein
YPO3809	PF12568	Acetyltransferase (GNAT) domain
YPO3810	PF01797	Transposase IS200 like
YPO3811	PF00140	Sigma-70 factor, region 1
YPO3811	PF04542	Sigma-70 region 2
YPO3811	PF04545	Sigma-70, region 4
YPO3812	PF02687	YPO3812
YPO3813	PF00005	ABC transporter
YPO3814	PF00448	SRP54-type protein, GTPase domain
YPO3814	PF02881	SRP54-type protein, helical bundle domain
YPO3816	PF03602	Conserved hypothetical protein 95
YPO3816a	PF06611	YPO3816a
YPO3817	PF10694	Protein of unknown function (DUF2500)
YPO3818	PF08850	YPO3818
YPO3819	PF07947	YPO3819
YPO3820	PF00122	E1-E2 ATPase
YPO3820	PF00403	Heavy-metal-associated domain
YPO3820	PF00702	haloacid dehalogenase-like hydrolase
YPO3821	PF01206	Sulfurtransferase TusA
YPO3822	PF02592	YPO3822
YPO3823	PF08786	Domain of unknown function (DUF1795)
YPO3824	PF02754	YPO3824
YPO3824	PF13183	4Fe-4S dicluster domain
YPO3825	PF00890	FAD binding domain
YPO3826	PF01266	FAD dependent oxidoreductase
YPO3826	PF04324	BFD-like [2Fe-2S] binding domain
YPO3826	PF16901	YPO3826
YPO3827	PF03009	Glycerophosphoryl diester phosphodiesterase family
YPO3828	PF03272	YPO3828
YPO3829	PF08282	haloacid dehalogenase-like hydrolase
YPO3830	PF12146	Putative lysophospholipase
YPO3831	PF01810	YPO3831
YPO3832	PF01810	YPO3832
YPO3833	PF00270	DEAD/DEAH box helicase
YPO3833	PF00271	Helicase conserved C-terminal domain
YPO3833	PF00570	HRDC domain
YPO3833	PF09382	RQC domain
YPO3833	PF16124	YPO3833
YPO3834	PF02253	Phospholipase A1
YPO3835	PF03061	Thioesterase superfamily
YPO3836	PF00892	EamA-like transporter family
YPO3837	PF01544	CorA-like Mg2+ transporter protein
YPO3838	PF09370	TIM-barrel signal transduction protein
YPO3839	PF06792	Uncharacterised protein family (UPF0261)
YPO3840	PF00440	Bacterial regulatory proteins, tetR family
YPO3841	PF00580	UvrD/REP helicase N-terminal domain
YPO3841	PF13361	UvrD-like helicase C-terminal domain
YPO3842	PF00702	haloacid dehalogenase-like hydrolase
YPO3843	PF00589	Phage integrase family
YPO3843	PF02899	Phage integrase, N-terminal SAM-like domain
YPO3844	PF04340	Protein of unknown function, DUF484
YPO3845	PF01678	Diaminopimelate epimerase
YPO3846	PF13627	YPO3846
YPO3847	PF01491	Frataxin-like domain
YPO3848	PF01295	YPO3848
YPO3848	PF12633	YPO3848
YPO3849	PF01379	Porphobilinogen deaminase, dipyromethane cofactor binding domain
YPO3849	PF03900	Porphobilinogen deaminase, C-terminal domain
YPO3850	PF02602	Uroporphyrinogen-III synthase HemD
YPO3851	PF04375	YPO3851
YPO3852	PF07219	YPO3852
YPO3853	PF01797	Transposase IS200 like
YPO3854	PF00324	Amino acid permease
YPO3855	PF03808	YPO3855
YPO3856	PF06899	YPO3856
YPO3857	PF07429	YPO3857
YPO3858	PF01943	YPO3858
YPO3859	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
YPO3860	PF00583	Acetyltransferase (GNAT) family
YPO3861	PF00483	Nucleotidyl transferase
YPO3862	PF16363	YPO3862
YPO3863	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
YPO3863	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
YPO3863	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
YPO3864	PF02350	UDP-N-acetylglucosamine 2-epimerase
YPO3865	PF02706	Chain length determinant protein
YPO3866	PF00953	Glycosyl transferase family 4
YPO3867	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
YPO3867	PF07497	Rho termination factor, RNA-binding domain
YPO3867	PF07498	Rho termination factor, N-terminal domain
YPO3868	PF00085	Thioredoxin
YPO3869	PF00270	DEAD/DEAH box helicase
YPO3869	PF00271	Helicase conserved C-terminal domain
YPO3872	PF00580	UvrD/REP helicase N-terminal domain
YPO3872	PF13361	UvrD-like helicase C-terminal domain
YPO3873	PF13616	PPIC-type PPIASE domain
YPO3874	PF05096	Glutamine cyclotransferase
YPO3875	PF00872	YPO3875
YPO3877	PF16970	YPO3877
YPO3878	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
YPO3878	PF02753	Pili assembly chaperone PapD, C-terminal domain
YPO3879	PF00577	Outer membrane usher protein
YPO3879	PF13953	PapC C-terminal domain
YPO3879	PF13954	PapC N-terminal domain
YPO3880	PF00419	Fimbrial protein
YPO3881	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
YPO3881	PF02753	Pili assembly chaperone PapD, C-terminal domain
YPO3883	PF01320	Colicin immunity protein / pyocin immunity protein
YPO3888	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
YPO3888	PF07991	Acetohydroxy acid isomeroreductase, catalytic domain
YPO3889	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
YPO3889	PF03466	LysR substrate binding domain
YPO3893	PF06092	YPO3893
YPO3894	PF06092	YPO3894
YPO3895	PF06092	YPO3895
YPO3896	PF00291	Pyridoxal-phosphate dependent enzyme
YPO3896	PF00585	C-terminal regulatory domain of Threonine dehydratase
YPO3897	PF00920	Dehydratase family
YPO3899	PF01063	Aminotransferase class IV
YPO3900	PF13710	ACT domain
YPO3901	PF00205	Thiamine pyrophosphate enzyme, central domain
YPO3901	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
YPO3901	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
YPO3902	PF01078	Magnesium chelatase, subunit ChlI
YPO3902	PF13335	YPO3902
YPO3902	PF13541	Subunit ChlI of Mg-chelatase
YPO3903	PF04219	YPO3903
YPO3904	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
YPO3904	PF03466	LysR substrate binding domain
YPO3905	PF02653	YPO3905
YPO3906	PF02653	YPO3906
YPO3907	PF00005	ABC transporter
YPO3908	PF13407	Periplasmic binding protein domain
YPO3909	PF01177	Asp/Glu/Hydantoin racemase
YPO3910	PF00593	TonB dependent receptor
YPO3910	PF07715	TonB-dependent Receptor Plug Domain
YPO3911	PF05958	tRNA (Uracil-5-)-methyltransferase
YPO3912	PF07226	YPO3912
YPO3913	PF00440	Bacterial regulatory proteins, tetR family
YPO3914	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
YPO3914	PF07992	Pyridine nucleotide-disulphide oxidoreductase
YPO3915	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
YPO3915	PF03466	LysR substrate binding domain
YPO3916	PF00462	Glutaredoxin
YPO3916	PF08534	Redoxin
YPO3917	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
YPO3917	PF07992	Pyridine nucleotide-disulphide oxidoreductase
YPO3918	PF03544	Gram-negative bacterial TonB protein C-terminal
YPO3919	PF13437	HlyD family secretion protein
YPO3919	PF13533	Biotin-lipoyl like
YPO3920	PF00005	ABC transporter
YPO3920	PF00664	ABC transporter transmembrane region
YPO3922	PF06438	Heme-binding protein A (HasA)
YPO3923	PF00593	TonB dependent receptor
YPO3923	PF07715	TonB-dependent Receptor Plug Domain
YPO3924	PF00206	Lyase
YPO3924	PF14698	Argininosuccinate lyase C-terminal
YPO3925	PF00696	Amino acid kinase family
YPO3927	PF01118	Semialdehyde dehydrogenase, NAD binding domain
YPO3927	PF02774	Semialdehyde dehydrogenase, dimerisation domain
YPO3928	PF01546	Peptidase family M20/M25/M40
YPO3928	PF07687	Peptidase dimerisation domain
YPO3929	PF00311	Phosphoenolpyruvate carboxylase
YPO3931	PF13518	Helix-turn-helix domain
YPO3932	PF00665	Integrase core domain
YPO3932	PF13276	YPO3932
YPO3935	PF06092	YPO3935
YPO3937	PF01266	FAD dependent oxidoreductase
YPO3937	PF16901	YPO3937
YPO3938	PF00343	Carbohydrate phosphorylase
YPO3939	PF00534	Glycosyl transferases group 1
YPO3939	PF08323	Starch synthase catalytic domain
YPO3940	PF00483	Nucleotidyl transferase
YPO3941	PF00128	Alpha amylase, catalytic domain
YPO3941	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
YPO3942	PF00128	Alpha amylase, catalytic domain
YPO3942	PF02806	Alpha amylase, C-terminal all-beta domain
YPO3942	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
YPO3943	PF06580	YPO3943
YPO3943	PF07694	5TMR of 5TMR-LYT
YPO3944	PF01476	LysM domain
YPO3944	PF02369	Bacterial Ig-like domain (group 1)
YPO3944	PF11924	Protein of unknown function (DUF3442)
YPO3949	PF01118	Semialdehyde dehydrogenase, NAD binding domain
YPO3949	PF02774	Semialdehyde dehydrogenase, dimerisation domain
YPO3950	PF01914	YPO3950
YPO3953	PF01202	Shikimate kinase
YPO3954	PF02447	YPO3954
YPO3955	PF00356	Bacterial regulatory proteins, lacI family
YPO3955	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
YPO3956	PF02678	Pirin
YPO3958	PF00072	Response regulator receiver domain
YPO3958	PF00486	Transcriptional regulatory protein, C terminal
YPO3959	PF00294	pfkB family carbohydrate kinase
YPO3960	PF01116	Fructose-bisphosphate aldolase class-II
YPO3961	PF07385	Protein of unknown function (DUF1498)
YPO3962	PF13407	Periplasmic binding protein domain
YPO3963	PF02653	YPO3963
YPO3964	PF00005	ABC transporter
YPO3965	PF00072	Response regulator receiver domain
YPO3965	PF00512	His Kinase A (phospho-acceptor) domain
YPO3965	PF00672	HAMP domain
YPO3965	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YPO3965	PF12860	YPO3965
YPO3966	PF03486	HI0933-like protein
YPO3967	PF01384	YPO3967
YPO3968	PF01797	Transposase IS200 like
YPO3969	PF10625	YPO3969
YPO3970	PF00582	Universal stress protein family
YPO3971	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
YPO3971	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
YPO3973	PF08548	Peptidase M10 serralysin C terminal
YPO3974	PF04445	Putative SAM-dependent methyltransferase
YPO3975	PF01432	Peptidase family M3
YPO3976	PF04378	Ribosomal RNA small subunit methyltransferase D, RsmJ
YPO3977	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
YPO3977	PF07992	Pyridine nucleotide-disulphide oxidoreductase
YPO3978	PF05651	YPO3978
YPO3978	PF13556	PucR C-terminal helix-turn-helix domain
YPO3979	PF02447	YPO3979
YPO3980	PF02595	Glycerate kinase family
YPO3981	PF06092	YPO3981
YPO3982	PF06092	YPO3982
YPO3983	PF11692	YPO3983
YPO3984	PF03212	Pertactin
YPO3984	PF03797	Autotransporter beta-domain
YPO3985	PF03631	YPO3985
YPO3986	PF02611	CDP-diacylglycerol pyrophosphatase
YPO3987	PF05170	YPO3987
YPO3988	PF00563	EAL domain
YPO3989	PF01361	Tautomerase enzyme
YPO3990	PF00294	pfkB family carbohydrate kinase
YPO3991	PF00675	Insulinase (Peptidase family M16)
YPO3991	PF05193	Peptidase M16 inactive domain
YPO3992	PF00375	Sodium:dicarboxylate symporter family
YPO3993	PF00754	F5/8 type C domain
YPO3994	PF06917	Periplasmic pectate lyase
YPO3995	PF06178	Oligogalacturonate-specific porin protein (KdgM)
YPO3996	PF00563	EAL domain
YPO3996	PF00672	HAMP domain
YPO3996	PF00990	GGDEF domain
YPO3996	PF17154	YPO3996
YPO3999	PF00005	ABC transporter
YPO3999	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
YPO4000	PF00005	ABC transporter
YPO4000	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
YPO4001	PF00528	Binding-protein-dependent transport system inner membrane component
YPO4001	PF12911	YPO4001
YPO4002	PF00528	Binding-protein-dependent transport system inner membrane component
YPO4003	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
YPO4005	PF03865	Haemolysin secretion/activation protein ShlB/FhaC/HecB
YPO4005	PF08479	POTRA domain, ShlB-type
YPO4006	PF05860	haemagglutination activity domain
YPO4007	PF07690	Major Facilitator Superfamily
YPO4009	PF01695	IstB-like ATP binding protein
YPO4010	PF00665	Integrase core domain
YPO4010	PF02796	Helix-turn-helix domain of resolvase
YPO4012	PF00072	Response regulator receiver domain
YPO4012	PF00196	Bacterial regulatory proteins, luxR family
YPO4013	PF00884	Sulfatase
YPO4013	PF08019	YPO4013
YPO4014	PF12146	Putative lysophospholipase
YPO4015	PF00324	Amino acid permease
YPO4016	PF00221	Aromatic amino acid lyase
YPO4017	PF01175	Urocanase
YPO4018	PF00291	Pyridoxal-phosphate dependent enzyme
YPO4019	PF00156	Phosphoribosyl transferase domain
YPO4020	PF00892	EamA-like transporter family
YPO4021	PF13535	ATP-grasp domain
YPO4022	PF01497	Periplasmic binding protein
YPO4023	PF01032	FecCD transport family
YPO4024	PF01032	FecCD transport family
YPO4025	PF00005	ABC transporter
YPO4028	PF01381	Helix-turn-helix
YPO4031	PF04606	YPO4031
YPO4033	PF00589	Phage integrase family
YPO4033	PF13356	Domain of unknown function (DUF4102)
YPO4034	PF12833	Helix-turn-helix domain
YPO4034	PF13377	Periplasmic binding protein-like domain
YPO4035	PF02653	YPO4035
YPO4036	PF00005	ABC transporter
YPO4037	PF13407	Periplasmic binding protein domain
YPO4039	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
YPO4039	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
YPO4040	PF00419	Fimbrial protein
YPO4041	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
YPO4041	PF02753	Pili assembly chaperone PapD, C-terminal domain
YPO4044	PF00419	Fimbrial protein
YPO4045	PF01757	YPO4045
YPO4046	PF13518	Helix-turn-helix domain
YPO4047	PF00665	Integrase core domain
YPO4047	PF13276	YPO4047
YPO4048	PF07690	Major Facilitator Superfamily
YPO4049	PF13988	YPO4049
YPO4054	PF03841	L-seryl-tRNA selenium transferase
YPO4054	PF12390	YPO4054
YPO4055	PF04216	Protein involved in formate dehydrogenase formation
YPO4056	PF01292	Prokaryotic cytochrome b561
YPO4057	PF09163	Formate dehydrogenase N, transmembrane
YPO4057	PF13247	4Fe-4S dicluster domain
YPO4060	PF02634	FdhD/NarQ family
YPO4061	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
YPO4061	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
YPO4062	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
YPO4062	PF00672	HAMP domain
YPO4062	PF16591	YPO4062
YPO4064	PF10517	YPO4064
YPO4065	PF10928	Protein of unknown function (DUF2810)
YPO4066	PF05068	Mannitol repressor
YPO4067	PF01232	Mannitol dehydrogenase Rossmann domain
YPO4067	PF08125	Mannitol dehydrogenase C-terminal domain
YPO4068	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
YPO4068	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
YPO4068	PF02378	Phosphotransferase system, EIIC
YPO4070	PF11254	YPO4070
YPO4071	PF02092	YPO4071
YPO4071	PF05746	DALR anticodon binding domain
YPO4072	PF02091	Glycyl-tRNA synthetase alpha subunit
YPO4074	PF03352	Methyladenine glycosylase
YPO4075	PF13673	Acetyltransferase (GNAT) domain
YPO4076	PF00691	OmpA family
YPO4076	PF13488	YPO4076
YPO4078	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
YPO4078	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
YPO4080	PF00128	Alpha amylase, catalytic domain
YPO4082	PF00155	Aminotransferase class I and II
YPO4083	PF02080	TrkA-C domain
YPO4083	PF06826	YPO4083
YPO4084	PF00011	Hsp20/alpha crystallin family
YPO4085	PF00011	Hsp20/alpha crystallin family
YPO4086	PF07119	YPO4086
YPO4089	PF00291	Pyridoxal-phosphate dependent enzyme
YPO4090	PF02423	Ornithine cyclodeaminase/mu-crystallin family
YPO4091	PF13518	Helix-turn-helix domain
YPO4092	PF00665	Integrase core domain
YPO4092	PF13276	YPO4092
YPO4093	PF08282	haloacid dehalogenase-like hydrolase
YPO4094	PF00204	DNA gyrase B
YPO4094	PF00986	DNA gyrase B subunit, carboxyl terminus
YPO4094	PF01751	Toprim domain
YPO4094	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YPO4095	PF02463	RecF/RecN/SMC N terminal domain
YPO4096	PF00712	DNA polymerase III beta subunit, N-terminal domain
YPO4096	PF02767	DNA polymerase III beta subunit, central domain
YPO4096	PF02768	DNA polymerase III beta subunit, C-terminal domain
YPO4097	PF00308	Bacterial dnaA  protein
YPO4097	PF08299	Bacterial dnaA protein helix-turn-helix
YPO4097	PF11638	DnaA N-terminal domain
YPO4100	PF00468	Ribosomal protein L34
YPO4101	PF00825	Ribonuclease P
YPO4102	PF02096	60Kd inner membrane protein
YPO4102	PF14849	YidC periplasmic domain
YPO4103	PF01926	50S ribosome-binding GTPase
YPO4103	PF10396	GTP-binding protein TrmE N-terminus
YPO4103	PF12631	Catalytic cysteine-containing C-terminus of GTPase, MnmE
YPO4104	PF07055	Enoyl reductase FAD binding domain
YPO4104	PF12241	Trans-2-enoyl-CoA reductase catalytic region
YPO4104	PF12242	NAD(P)H binding domain of trans-2-enoyl-CoA reductase
YPO4107	PF00860	Permease family
YPO4108	PF13419	Haloacid dehalogenase-like hydrolase
YPO4109	PF00528	Binding-protein-dependent transport system inner membrane component
YPO4110	PF00528	Binding-protein-dependent transport system inner membrane component
YPO4111	PF00497	Bacterial extracellular solute-binding proteins, family 3
YPO4112	PF04519	YPO4112
YPO4113	PF01895	PhoU domain
YPO4114	PF00005	ABC transporter
YPO4115	PF00528	Binding-protein-dependent transport system inner membrane component
YPO4116	PF00528	Binding-protein-dependent transport system inner membrane component
YPO4117	PF12849	PBP superfamily domain
YPO4118	PF01380	SIS domain
YPO4118	PF13522	Glutamine amidotransferase domain
YPO4119	PF00132	Bacterial transferase hexapeptide (six repeats)
YPO4119	PF12804	MobA-like NTP transferase domain
YPO4120	PF00401	ATP synthase, Delta/Epsilon chain, long alpha-helix domain
YPO4120	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
YPO4121	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
YPO4121	PF02874	ATP synthase alpha/beta family, beta-barrel domain
YPO4122	PF00231	ATP synthase
YPO4123	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
YPO4123	PF00306	ATP synthase alpha/beta chain, C terminal domain
YPO4123	PF02874	ATP synthase alpha/beta family, beta-barrel domain
YPO4124	PF00213	ATP synthase delta (OSCP) subunit
YPO4125	PF00430	ATP synthase B/B' CF(0)
YPO4126	PF00137	ATP synthase subunit C
YPO4127	PF00119	ATP synthase A chain
YPO4128	PF03899	YPO4128
YPO4129	PF02527	rRNA small subunit methyltransferase G
YPO4130	PF01134	Glucose inhibited division protein A
YPO4130	PF13932	GidA associated domain 3
YPO828a	PF01797	Transposase IS200 like
YPPCP1.06	PF02705	YPPCP1.06